RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy8286
(858 letters)
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex;
1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Length = 190
Score = 134 bits (340), Expect = 2e-36
Identities = 63/199 (31%), Positives = 84/199 (42%), Gaps = 22/199 (11%)
Query: 655 FTHTSSLTRHIRKNHDPRYLPVDRKKTDEN-VNCDIC-KIVVLKSTLKSHMRIHDNAKPF 712
+SS E C C K L H R H KP+
Sbjct: 3 EFGSSSSVAQAA-LE-----------PGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPY 50
Query: 713 SCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKSCNRGFYSSSEYQAHLRSHRNIRP 769
C C KSF K +L HQ R H P+KC C + F + +AH R+H +P
Sbjct: 51 KCPECGKSFSDKKDLTRHQ-----RTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKP 105
Query: 770 FTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCH 829
+ C CG+ F + + H R H +K Y C CGK+F R L H R H GE+P+ C
Sbjct: 106 YACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP 165
Query: 830 ICGKTSTTKSNHNKHVKTH 848
CGK+ + + N H +TH
Sbjct: 166 ECGKSFSRRDALNVHQRTH 184
Score = 131 bits (333), Expect = 2e-35
Identities = 69/286 (24%), Positives = 97/286 (33%), Gaps = 98/286 (34%)
Query: 540 TFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKR 599
+ S KPY C C KSF + L++H+ THTG P+ C C + F
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 600 YSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQETHATVPKQCTYCTEKFTHTS 659
+L +H++ H GE K P +C C + F+ +
Sbjct: 62 KKDLTRHQRT-------------HTGE------K-----------PYKCPECGKSFSQRA 91
Query: 660 SLTRHIRKNHDPRYLPVDRKKTDENVNCDICKIVVLKSTLKSHMRIHDNAKPFSCTVCKK 719
+L H R H KP++C C K
Sbjct: 92 NLRA--------------------------------------HQRTHTGEKPYACPECGK 113
Query: 720 SFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGRKF 779
SF +L HQ TH + E +P+ C CG+ F
Sbjct: 114 SFSQLAHLRAHQRTH-------------------TGE-----------KPYKCPECGKSF 143
Query: 780 IRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERP 825
R+ N H R H +K Y C CGK+F R L H R H G++
Sbjct: 144 SREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189
Score = 112 bits (284), Expect = 8e-29
Identities = 64/204 (31%), Positives = 83/204 (40%), Gaps = 46/204 (22%)
Query: 534 CPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMC 593
CP C K+F L H RTH KPYKC C KSF + L+ H+ THTG P+ C C
Sbjct: 24 CPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPEC 83
Query: 594 DRHFKRYSNLAQHKKVIHLKKKKIKDFYCH-CGEIFQSRGKLLWHQETHATVPK--QCTY 650
+ F + +NL H++ H +K C CG+ F L HQ TH T K +C
Sbjct: 84 GKSFSQRANLRAHQR-THTGEKPYA---CPECGKSFSQLAHLRAHQRTH-TGEKPYKCPE 138
Query: 651 CTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDENVNCDICKIVVLKSTLKSHMRIHDNAK 710
C + F+ +L H R H K
Sbjct: 139 CGKSFSREDNLHT--------------------------------------HQRTHTGEK 160
Query: 711 PFSCTVCKKSFYTKWNLGLHQWTH 734
P+ C C KSF + L +HQ TH
Sbjct: 161 PYKCPECGKSFSRRDALNVHQRTH 184
Score = 106 bits (267), Expect = 2e-26
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Query: 720 SFYTKWNLGLHQWTHVSRMHM---PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCG 776
S + + + P+ C C + F S H R+H +P+ C CG
Sbjct: 2 SEFGSSSSVAQA-----ALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECG 56
Query: 777 RKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTST 836
+ F K + RH R H +K Y C CGK+F + L AH R H GE+P++C CGK+ +
Sbjct: 57 KSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFS 116
Query: 837 TKSNHNKHVKTH 848
++ H +TH
Sbjct: 117 QLAHLRAHQRTH 128
Score = 58.2 bits (142), Expect = 7e-10
Identities = 25/51 (49%), Positives = 30/51 (58%)
Query: 534 CPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTG 584
CP C K+F + +L H RTH KPYKC C KSF L+ H+ THTG
Sbjct: 136 CPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTG 186
>1tf6_A Protein (transcription factor IIIA); complex (transcription
regulation/DNA), RNA polymerase III, transcription
initiation, zinc finger protein; HET: DNA; 3.10A
{Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Length = 190
Score = 115 bits (290), Expect = 1e-29
Identities = 42/162 (25%), Positives = 58/162 (35%), Gaps = 20/162 (12%)
Query: 702 HMRIHDNAKPFSCTV--CKKSFYTKWNLGLHQWTHVSRMHM---PFKCK--SCNRGFYSS 754
+ K + C+ C ++ W L H H PF CK C +GF S
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHL-----CKHTGEKPFPCKEEGCEKGFTSL 57
Query: 755 SEYQAHLRSHRNIRPFTCN--YCGRKFIRKFNCIRHVREH--ELKKKYSCTI--CGKTFH 808
H +H + FTC+ C +F K N +H Y C CGK F
Sbjct: 58 HHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFK 117
Query: 809 RSYYLTAHVRVHNGERPFSCH--ICGKTSTTKSNHNKHVKTH 848
+ L H H + P+ C C K + S +H K H
Sbjct: 118 KHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 159
Score = 112 bits (283), Expect = 1e-28
Identities = 42/167 (25%), Positives = 61/167 (36%), Gaps = 18/167 (10%)
Query: 696 KSTLKSHMRIHDNAKPFSCT--VCKKSFYTKWNLGLHQWTHVSRMHM---PFKCK--SCN 748
L++H+ H KPF C C+K F + +L H H F C C+
Sbjct: 27 NWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHS-----LTHTGEKNFTCDSDGCD 81
Query: 749 RGFYSSSEYQAHLRSHRN--IRPFTCNY--CGRKFIRKFNCIRHVREHELKKKYSCT--I 802
F + + + H N I + C++ CG+ F + H H + Y C
Sbjct: 82 LRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEG 141
Query: 803 CGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTHH 849
C K F L H +VH G C T + + KHV H
Sbjct: 142 CDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 188
Score = 100 bits (251), Expect = 2e-24
Identities = 46/229 (20%), Positives = 66/229 (28%), Gaps = 55/229 (24%)
Query: 550 HMRTHLKIKPYKCDV--CDKSFVTAQKLSDHKNTHTGNAPFPCN--MCDRHFKRYSNLAQ 605
+ K Y C C ++ KL H HTG PFPC C++ F +L +
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62
Query: 606 HKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQETHATVPKQCTY-CTEK-----FTHTS 659
H H +K C F ++ + H K C Y C + F
Sbjct: 63 HSL-THTGEKNFTCDSDGCDLRFTTKANMKKHFNRF-HNIKICVYVCHFENCGKAFKK-- 118
Query: 660 SLTRHIRKNHDPRYLPVDRKKTDENVNCDICKIVVLKSTLKSHMRIHDNAKPFSCT--VC 717
+ LK H H P+ C C
Sbjct: 119 ------------------------------------HNQLKVHQFSHTQQLPYECPHEGC 142
Query: 718 KKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAH-LRSHR 765
K F L H+ H + K SC+ + + Y H H+
Sbjct: 143 DKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLYLKHVAECHQ 189
Score = 93.0 bits (232), Expect = 8e-22
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 8/140 (5%)
Query: 537 CSKTFPSKPSLTLHMRTHLKIKPYKCD--VCDKSFVTAQKLSDHKNTHTGN--APFPCNM 592
C K F S LT H TH K + CD CD F T + H N + C+
Sbjct: 50 CEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHF 109
Query: 593 --CDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQETHA-TVPKQCT 649
C + FK+++ L H+ H ++ + + C + F +L H++ HA K+
Sbjct: 110 ENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD 168
Query: 650 YCTEKFTHTSSLTRHIRKNH 669
C+ + +H+ + H
Sbjct: 169 SCSFVGKTWTLYLKHVAECH 188
Score = 64.2 bits (157), Expect = 6e-12
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 786 IRHVREHELKKKYSCTI--CGKTFHRSYYLTAHVRVHNGERPFSCH--ICGKTSTTKSNH 841
+ + K+Y C+ CG +++++ L AH+ H GE+PF C C K T+ +
Sbjct: 1 MGEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHL 60
Query: 842 NKHVKTH 848
+H TH
Sbjct: 61 TRHSLTH 67
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Mus musculus} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 124
Score = 102 bits (258), Expect = 4e-26
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHEL---KKK 797
+C +C++ F S + H R H +PF C CG+ + RK N + H + + ++
Sbjct: 7 GVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV 66
Query: 798 YSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKH-VKTH 848
++C++C +TF R L H+ H GE P+ C C + K + H +K H
Sbjct: 67 FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118
Score = 96.4 bits (241), Expect = 8e-24
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 12/122 (9%)
Query: 710 KPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKSCNRGFYSSSEYQAHLRS--- 763
C C K F +K+ L +H R H PF+C C + ++ H
Sbjct: 6 SGVECPTCHKKFLSKYYLKVHN-----RKHTGEKPFECPKCGKCYFRKENLLEHEARNCM 60
Query: 764 HRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAH-VRVHNG 822
+R+ + FTC+ C F R+ H+ H + Y C+ C + F + L +H +++H+G
Sbjct: 61 NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
Query: 823 ER 824
Sbjct: 121 PS 122
Score = 85.6 bits (213), Expect = 4e-20
Identities = 36/142 (25%), Positives = 53/142 (37%), Gaps = 33/142 (23%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDH---KNTHTGNAP 587
+ CP C K F SK L +H R H KP++C C K + + L +H +
Sbjct: 7 GVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV 66
Query: 588 FPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQETHATVPKQ 647
F C++C F+R L H H GE P +
Sbjct: 67 FTCSVCQETFRRRMELRLHMVS-------------HTGE------M-----------PYK 96
Query: 648 CTYCTEKFTHTSSLTRHIRKNH 669
C+ C+++F L H+ K H
Sbjct: 97 CSSCSQQFMQKKDLQSHMIKLH 118
Score = 81.4 bits (202), Expect = 1e-18
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 768 RPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVR---VHNGER 824
C C +KF+ K+ H R+H +K + C CGK + R L H ++ E+
Sbjct: 6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQ 65
Query: 825 PFSCHICGKTSTTKSNHNKHVKTH 848
F+C +C +T + H+ +H
Sbjct: 66 VFTCSVCQETFRRRMELRLHMVSH 89
Score = 68.3 bits (168), Expect = 6e-14
Identities = 32/162 (19%), Positives = 53/162 (32%), Gaps = 49/162 (30%)
Query: 582 HTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQETH 641
+G++ C C + F L H + H GE K
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRK-------------HTGE------K-------- 34
Query: 642 ATVPKQCTYCTEKFTHTSSLTRHIRKN--HDPRYLPVDRKKTDENV-NCDIC-KIVVLKS 697
P +C C + + +L H +N + E V C +C + +
Sbjct: 35 ---PFECPKCGKCYFRKENLLEHEARNCMN-----------RSEQVFTCSVCQETFRRRM 80
Query: 698 TLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMH 739
L+ HM H P+ C+ C + F K +L H ++H
Sbjct: 81 ELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI----KLH 118
Score = 37.1 bits (87), Expect = 0.004
Identities = 7/29 (24%), Positives = 10/29 (34%)
Query: 820 HNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+G C C K +K H + H
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKH 30
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the
cerebellum 3, disease mutation, DNA-binding,
metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Length = 155
Score = 102 bits (256), Expect = 2e-25
Identities = 31/143 (21%), Positives = 50/143 (34%), Gaps = 11/143 (7%)
Query: 697 STLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH-------VSRMHMPFKCKSCNR 749
S I + C ++F T L H + + +C +
Sbjct: 11 KQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGK 70
Query: 750 GFYSSSEYQAHLRSHRNIRPFTCNY--CGRKFIRKFNCIRHVREHELKKKYSCTI--CGK 805
F + + H+R H +PF C + CG+ F R N H R H +K + C C +
Sbjct: 71 SFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDR 130
Query: 806 TFHRSYYLTAHVRVHNGERPFSC 828
F S H+ VH ++
Sbjct: 131 RFANSSDRKKHMHVHTSDKSGPS 153
Score = 98.5 bits (246), Expect = 4e-24
Identities = 39/145 (26%), Positives = 55/145 (37%), Gaps = 15/145 (10%)
Query: 717 CKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFT----- 771
S +W + + KSC+R F + E H+ P
Sbjct: 3 SGSSGQPIKQELSCKWIDEA--QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60
Query: 772 ----CNYCGRKFIRKFNCIRHVREHELKKKYSCTI--CGKTFHRSYYLTAHVRVHNGERP 825
C G+ F K+ + H+R H +K + C CGK F RS L H R H GE+P
Sbjct: 61 YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP 120
Query: 826 FSCHI--CGKTSTTKSNHNKHVKTH 848
F C C + S+ KH+ H
Sbjct: 121 FKCEFEGCDRRFANSSDRKKHMHVH 145
Score = 89.3 bits (222), Expect = 6e-21
Identities = 28/114 (24%), Positives = 36/114 (31%), Gaps = 11/114 (9%)
Query: 746 SCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYS------ 799
S + + C R F + HV +
Sbjct: 2 SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61
Query: 800 ---CTICGKTFHRSYYLTAHVRVHNGERPFSCHI--CGKTSTTKSNHNKHVKTH 848
C GK+F Y L H+RVH GE+PF C CGK N H +TH
Sbjct: 62 WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115
Score = 88.5 bits (220), Expect = 1e-20
Identities = 39/156 (25%), Positives = 59/156 (37%), Gaps = 10/156 (6%)
Query: 624 CGEIFQSRGKLLWHQETHAT-VPKQCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTD 682
G Q + L + + + C F+ L H+ H P
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGG--PEQNNHVC 60
Query: 683 ENVNCDIC-KIVVLKSTLKSHMRIHDNAKPFSCTV--CKKSFYTKWNLGLHQWTHVSRMH 739
C K K L +H+R+H KPF C C K F NL +H+ TH
Sbjct: 61 YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGE-- 118
Query: 740 MPFKC--KSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
PFKC + C+R F +SS+ + H+ H + + +
Sbjct: 119 KPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 83.5 bits (207), Expect = 7e-19
Identities = 29/143 (20%), Positives = 47/143 (32%), Gaps = 15/143 (10%)
Query: 537 CSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPF-------- 588
+ CD++F T +L H P
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 589 -PCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQETHAT--VP 645
C + FK L H + +H +K + CG+IF L H+ TH T P
Sbjct: 63 EECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFARSENLKIHKRTH-TGEKP 120
Query: 646 KQCTY--CTEKFTHTSSLTRHIR 666
+C + C +F ++S +H+
Sbjct: 121 FKCEFEGCDRRFANSSDRKKHMH 143
Score = 81.2 bits (201), Expect = 4e-18
Identities = 37/121 (30%), Positives = 49/121 (40%), Gaps = 16/121 (13%)
Query: 505 KQRRCDTCSEVFDKLKDYQEHIKNVH------------PLPCPVCSKTFPSKPSLTLHMR 552
R +C F + + H+ H CP K+F +K L H+R
Sbjct: 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83
Query: 553 THLKIKPYKCDV--CDKSFVTAQKLSDHKNTHTGNAPFPCNM--CDRHFKRYSNLAQHKK 608
H KP+ C C K F ++ L HK THTG PF C CDR F S+ +H
Sbjct: 84 VHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH 143
Query: 609 V 609
V
Sbjct: 144 V 144
Score = 76.6 bits (189), Expect = 1e-16
Identities = 35/122 (28%), Positives = 45/122 (36%), Gaps = 12/122 (9%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYK---------CDVCDKSFVTAQKLSDHKNT 581
P C +TF + L H+ P + C KSF KL +H
Sbjct: 25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV 84
Query: 582 HTGNAPFPCNM--CDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQE 639
HTG PFPC C + F R NL HK+ H +K K + C F + H
Sbjct: 85 HTGEKPFPCPFPGCGKIFARSENLKIHKR-THTGEKPFKCEFEGCDRRFANSSDRKKHMH 143
Query: 640 TH 641
H
Sbjct: 144 VH 145
Score = 63.1 bits (154), Expect = 8e-12
Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 9/103 (8%)
Query: 497 PSLTSIKNKQRRCDTCSEVFDKLKDYQEHIKNVH----PLPCPV--CSKTFPSKPSLTLH 550
P + C + F HI+ VH P PCP C K F +L +H
Sbjct: 53 PEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFARSENLKIH 111
Query: 551 MRTHLKIKPYKCDV--CDKSFVTAQKLSDHKNTHTGNAPFPCN 591
RTH KP+KC+ CD+ F + H + HT + P +
Sbjct: 112 KRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 46.9 bits (112), Expect = 3e-06
Identities = 7/47 (14%), Positives = 13/47 (27%)
Query: 803 CGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTHH 849
G + + + + C +T +T HV H
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEH 49
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA
complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 155
Score = 101 bits (255), Expect = 3e-25
Identities = 42/155 (27%), Positives = 61/155 (39%), Gaps = 17/155 (10%)
Query: 710 KPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKSCN-----RGFYSSSEYQAHL 761
C + F ++ L H + +H F C R F + H+
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSE--HIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM 59
Query: 762 RSHRNIRPFTCNY--CGRKFIRKFNCIRHVREHELKKKYSCT--ICGKTFHRSYYLTAH- 816
R H +P C + C + + R N H+R H +K Y C C K F + H
Sbjct: 60 RRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQ 119
Query: 817 VRVHNGERPFSCHI--CGKTSTTKSNHNKHVKTHH 849
R H+ E+P+ C + C K T S+ KHVKT H
Sbjct: 120 NRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154
Score = 89.2 bits (222), Expect = 6e-21
Identities = 46/176 (26%), Positives = 69/176 (39%), Gaps = 46/176 (26%)
Query: 508 RCDTCSEVFDKLKDYQEHIKNVH------PLPCPVC-----SKTFPSKPSLTLHMRTHLK 556
R D CS+ FD + HI + H C + F ++ L +HMR H
Sbjct: 5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64
Query: 557 IKPYKCDV--CDKSFVTAQKLSDHKNTHTGNAPFPCN--MCDRHFKRYSNLAQHKKVIHL 612
KP+KC C KS+ + L H +HTG P+ C C + F S+ A+H+ H
Sbjct: 65 EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124
Query: 613 KKKKIKDFYCHCGEIFQSRGKLLWHQETHATVPKQCTY--CTEKFTHTSSLTRHIR 666
+K P C CT+++T SSL +H++
Sbjct: 125 NEK-----------------------------PYVCKLPGCTKRYTDPSSLRKHVK 151
Score = 72.2 bits (178), Expect = 5e-15
Identities = 43/224 (19%), Positives = 69/224 (30%), Gaps = 89/224 (39%)
Query: 558 KPYKCDVCDKSFVTAQKLSDHKNT---HTGNAPFPCNMCD-----RHFKRYSNLAQHKKV 609
+ D C + F + ++L H N+ H F C+ R FK L H +
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61
Query: 610 IHLKKKKIKDFYCHCGEIFQSRGKLLWHQETHATVPKQCTY--CTEKFTHTSSLTRHIRK 667
H GE K P +CT+ C + ++ +
Sbjct: 62 -------------HTGE------K-----------PHKCTFEGCRKSYSRLEN------- 84
Query: 668 NHDPRYLPVDRKKTDENVNCDICKIVVLKSTLKSHMRIHDNAKPFSCT--VCKKSFYTKW 725
LK+H+R H KP+ C C K+F
Sbjct: 85 -------------------------------LKTHLRSHTGEKPYMCEHEGCSKAFSNAS 113
Query: 726 NLGLHQWTHVSRMHM---PFKCKS--CNRGFYSSSEYQAHLRSH 764
+ HQ R H P+ CK C + + S + H+++
Sbjct: 114 DRAKHQN----RTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153
Score = 48.7 bits (117), Expect = 6e-07
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 535 PVCSKTFPSKPSLTLHM-RTHLKIKPYKCDV--CDKSFVTAQKLSDHKNTHTG 584
CSK F + H RTH KPY C + C K + L H T G
Sbjct: 103 EGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 33.3 bits (77), Expect = 0.13
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 6/51 (11%)
Query: 510 DTCSEVFDKLKDYQEHIKNVH----PLPCPV--CSKTFPSKPSLTLHMRTH 554
+ CS+ F D +H H P C + C+K + SL H++T
Sbjct: 103 EGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153
Score = 29.1 bits (66), Expect = 3.9
Identities = 4/27 (14%), Positives = 9/27 (33%)
Query: 823 ERPFSCHICGKTSTTKSNHNKHVKTHH 849
E C + ++ H+ + H
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEH 27
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET:
DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Length = 119
Score = 98.0 bits (245), Expect = 2e-24
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Query: 741 PFKCK--SCNRGFYSSSEYQAHLRSHRNIRPFTCNY--CGRKFIRKFNCIRHVREHELKK 796
PF C CN+ ++ S Q H R H +P+ C++ C R+F R RH R H K
Sbjct: 6 PFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVK 65
Query: 797 KYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHI--CGKTSTTKSNHNKHVKTH 848
+ C C + F RS +L H R H GE+PFSC C K +H H
Sbjct: 66 PFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 87.2 bits (217), Expect = 1e-20
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 535 PVCSKTFPSKPSLTLHMRTHLKIKPYKCDV--CDKSFVTAQKLSDHKNTHTGNAPFPCNM 592
P C+K + L +H R H KPY+CD C++ F + +L H+ HTG PF C
Sbjct: 12 PGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT 71
Query: 593 CDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQETH 641
C R F R +L H + H +K + C + F +L+ H H
Sbjct: 72 CQRKFSRSDHLKTHTR-THTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 80.6 bits (200), Expect = 3e-18
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 768 RPFTCNY--CGRKFIRKFNCIRHVREHELKKKYSCTI--CGKTFHRSYYLTAHVRVHNGE 823
RPF C Y C +++ + + H R+H +K Y C C + F RS L H R H G
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64
Query: 824 RPFSCHICGKTSTTKSNHNKHVKTH 848
+PF C C + + + H +TH
Sbjct: 65 KPFQCKTCQRKFSRSDHLKTHTRTH 89
Score = 79.9 bits (198), Expect = 4e-18
Identities = 36/104 (34%), Positives = 49/104 (47%), Gaps = 12/104 (11%)
Query: 696 KSTLKSHMRIHDNAKPFSCTV--CKKSFYTKWNLGLHQWTHVSRMHM---PFKCKSCNRG 750
S L+ H R H KP+ C C++ F L HQ R H PF+CK+C R
Sbjct: 21 LSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQ-----RRHTGVKPFQCKTCQRK 75
Query: 751 FYSSSEYQAHLRSHRNIRPFTCNY--CGRKFIRKFNCIRHVREH 792
F S + H R+H +PF+C + C +KF R +RH H
Sbjct: 76 FSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 70.2 bits (173), Expect = 1e-14
Identities = 42/183 (22%), Positives = 56/183 (30%), Gaps = 74/183 (40%)
Query: 558 KPYKCD--VCDKSFVTAQKLSDHKNTHTGNAPFPCNM--CDRHFKRYSNLAQHKKVIHLK 613
+P+ C C+K + L H HTG P+ C+ C+R F R L +H++
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR---- 60
Query: 614 KKKIKDFYCHCGEIFQSRGKLLWHQETHATVPKQCTYCTEKFTHTSSLTRHIRKNHDPRY 673
H G K P QC C KF+ +
Sbjct: 61 ---------HTGV------K-----------PFQCKTCQRKFSRSDH------------- 81
Query: 674 LPVDRKKTDENVNCDICKIVVLKSTLKSHMRIHDNAKPFSC--TVCKKSFYTKWNLGLHQ 731
LK+H R H KPFSC C+K F L H
Sbjct: 82 -------------------------LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHH 116
Query: 732 WTH 734
H
Sbjct: 117 NMH 119
Score = 60.2 bits (147), Expect = 3e-11
Identities = 37/130 (28%), Positives = 48/130 (36%), Gaps = 26/130 (20%)
Query: 645 PKQCTY--CTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDE------NVNCDICKIVVLK 696
P C Y C +++ S L H RK H T E +C+ +
Sbjct: 6 PFMCAYPGCNKRYFKLSHLQMHSRK-H-----------TGEKPYQCDFKDCE--RRFSRS 51
Query: 697 STLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKS--CNRGFYSS 754
LK H R H KPF C C++ F +L H TH PF C+ C + F S
Sbjct: 52 DQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGE--KPFSCRWPSCQKKFARS 109
Query: 755 SEYQAHLRSH 764
E H H
Sbjct: 110 DELVRHHNMH 119
Score = 54.4 bits (132), Expect = 3e-09
Identities = 25/83 (30%), Positives = 33/83 (39%), Gaps = 9/83 (10%)
Query: 508 RCDT--CSEVFDKLKDYQEHIKNVH----PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYK 561
+CD C F + + H + H P C C + F L H RTH KP+
Sbjct: 38 QCDFKDCERRFSRSDQLKRHQR-RHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFS 96
Query: 562 CDV--CDKSFVTAQKLSDHKNTH 582
C C K F + +L H N H
Sbjct: 97 CRWPSCQKKFARSDELVRHHNMH 119
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation,
initiator element, zinc finger protein, DNA- protein
recognition; HET: DNA; 2.50A {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Length = 124
Score = 96.8 bits (242), Expect = 5e-24
Identities = 36/123 (29%), Positives = 51/123 (41%), Gaps = 9/123 (7%)
Query: 710 KPFSCTV--CKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNI 767
+ +C C K F + H TH R C C + F SS+ + H H
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTHGPR---VHVCAECGKAFVESSKLKRHQLVHTGE 60
Query: 768 RPFTCNY--CGRKFIRKFNCIRHVREHELKKKYSCTI--CGKTFHRSYYLTAHVRVHNGE 823
+PF C + CG++F FN HVR H + Y C C K F +S L +H+ H
Sbjct: 61 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA 120
Query: 824 RPF 826
+
Sbjct: 121 KNN 123
Score = 95.7 bits (239), Expect = 1e-23
Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 741 PFKC--KSCNRGFYSSSEYQAHLRSHRNI---RPFTCNYCGRKFIRKFNCIRHVREHELK 795
C K C + F +S +R H + R C CG+ F+ RH H +
Sbjct: 5 TIACPHKGCTKMFRDNS----AMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGE 60
Query: 796 KKYSCTI--CGKTFHRSYYLTAHVRVHNGERPFSCHI--CGKTSTTKSNHNKHVKTH 848
K + CT CGK F + L HVR+H G+RP+ C C K +N H+ TH
Sbjct: 61 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117
Score = 83.3 bits (207), Expect = 3e-19
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 531 PLPCPV--CSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPF 588
+ CP C+K F ++ H+ TH + + C C K+FV + KL H+ HTG PF
Sbjct: 5 TIACPHKGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQLVHTGEKPF 63
Query: 589 PCNM--CDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQETH 641
C C + F NL H + IH + + C + F L H TH
Sbjct: 64 QCTFEGCGKRFSLDFNLRTHVR-IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117
Score = 78.7 bits (195), Expect = 1e-17
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Query: 768 RPFTCNY--CGRKFIRKFNCIRHVREH-ELKKKYSCTICGKTFHRSYYLTAHVRVHNGER 824
R C + C + F +H+ H + + C CGK F S L H VH GE+
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTHGP--RVHVCAECGKAFVESSKLKRHQLVHTGEK 61
Query: 825 PFSCHI--CGKTSTTKSNHNKHVKTH 848
PF C CGK + N HV+ H
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTHVRIH 87
Score = 65.2 bits (160), Expect = 6e-13
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 558 KPYKCDV--CDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKK 615
+ C C K F + H +TH G C C + F S L +H+ +H +K
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQL-VHTGEK 61
Query: 616 KIKDFYCHCGEIFQSRGKLLWHQETHATV--PKQCTY--CTEKFTHTSSLTRHIR 666
+ + CG+ F L H H T P C + C +KF +++L HI
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTHVRIH-TGDRPYVCPFDGCNKKFAQSTNLKSHIL 115
Score = 61.8 bits (151), Expect = 1e-11
Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 29/137 (21%)
Query: 645 PKQCTY--CTEKFTHTSSLTRHIRKNHDPR-YLPVDRKKTDENVNCDIC-KIVVLKSTLK 700
C + CT+ F S++ +H+ H PR + C C K V S LK
Sbjct: 5 TIACPHKGCTKMFRDNSAMRKHLH-THGPRVH------------VCAECGKAFVESSKLK 51
Query: 701 SHMRIHDNAKPFSCTV--CKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS--CNRGFYS 753
H +H KPF CT C K F +NL H R+H P+ C CN+ F
Sbjct: 52 RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHV-----RIHTGDRPYVCPFDGCNKKFAQ 106
Query: 754 SSEYQAHLRSHRNIRPF 770
S+ ++H+ +H +
Sbjct: 107 STNLKSHILTHAKAKNN 123
Score = 57.9 bits (141), Expect = 3e-10
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 9/89 (10%)
Query: 508 RCDTCSEVFDKLKDYQEHIKNVH----PLPCPV--CSKTFPSKPSLTLHMRTHLKIKPYK 561
C C + F + + H VH P C C K F +L H+R H +PY
Sbjct: 36 VCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYV 94
Query: 562 CDV--CDKSFVTAQKLSDHKNTHTGNAPF 588
C C+K F + L H TH
Sbjct: 95 CPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 37.1 bits (87), Expect = 0.004
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 531 PLPCPV--CSKTFPSKPSLTLHMRTHLKIKPYK 561
P CP C+K F +L H+ TH K K +
Sbjct: 92 PYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Mus musculus} SCOP:
k.12.1.1
Length = 106
Score = 90.6 bits (226), Expect = 5e-22
Identities = 31/95 (32%), Positives = 44/95 (46%)
Query: 754 SSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYL 813
SS + + F C +CGR F + +N + H R H ++ Y+C IC K F R +L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 814 TAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
H +H+ E+PF C CGK H H
Sbjct: 62 RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLH 96
Score = 88.6 bits (221), Expect = 3e-21
Identities = 30/133 (22%), Positives = 46/133 (34%), Gaps = 30/133 (22%)
Query: 696 KSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSS 755
S K F C C + F +NL +H+
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHE------------------------ 37
Query: 756 EYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTA 815
R+H + RP+TC+ C + F R+ + H H +K + C CGK F +S L
Sbjct: 38 ------RTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAV 91
Query: 816 HVRVHNGERPFSC 828
H +H +
Sbjct: 92 HKTLHMQTSSPTA 104
Score = 80.6 bits (200), Expect = 2e-18
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPC 590
C C + F +L +H RTH +PY CD+C K+F L DH+ H+ PF C
Sbjct: 17 EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKC 76
Query: 591 NMCDRHFKRYSNLAQHKKVIH 611
C + F + LA HK +H
Sbjct: 77 QECGKGFCQSRTLAVHKT-LH 96
Score = 77.1 bits (191), Expect = 3e-17
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Query: 546 SLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQ 605
+ K + C C + F + L H+ THT P+ C++C + F+R +L
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 606 HKKVIHLKKKKIKDFYCH-CGEIFQSRGKLLWHQETH 641
H+ IH K+K K C CG+ F L H+ H
Sbjct: 64 HRY-IHSKEKPFK---CQECGKGFCQSRTLAVHKTLH 96
Score = 64.0 bits (157), Expect = 9e-13
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPC 590
P C +C K F + L H H K KP+KC C K F ++ L+ HK H +
Sbjct: 45 PYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Query: 591 N 591
Sbjct: 105 A 105
Score = 61.7 bits (151), Expect = 7e-12
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 8/81 (9%)
Query: 696 KSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKSCNRGFY 752
L H R H + +P++C +C K+F + +L H+ +H PFKC+ C +GF
Sbjct: 30 SYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR-----YIHSKEKPFKCQECGKGFC 84
Query: 753 SSSEYQAHLRSHRNIRPFTCN 773
S H H T
Sbjct: 85 QSRTLAVHKTLHMQTSSPTAA 105
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB
domain containing protein 22B, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 110
Score = 89.4 bits (223), Expect = 2e-21
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSC 800
+ C+ C + F S+ H+ H +RP+ C CG+KF K + + H++ H K Y C
Sbjct: 10 LYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYEC 68
Query: 801 TICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSN 840
IC K F H V + + + + +T S
Sbjct: 69 NICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASG 106
Score = 80.6 bits (200), Expect = 2e-18
Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 11/116 (9%)
Query: 703 MRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKSCNRGFYSSSEYQA 759
K + C C KSF K H MH+ P+ C C + F
Sbjct: 2 SSGSSGDKLYPCQ-CGKSFTHKSQRDRHM-----SMHLGLRPYGCGVCGKKFKMKHHLVG 55
Query: 760 HLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTA 815
H++ H I+P+ CN C ++F+ + + RHV K Y + + ++
Sbjct: 56 HMKIHTGIKPYECNICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPSS 109
Score = 80.6 bits (200), Expect = 2e-18
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 762 RSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHN 821
+ + C CG+ F K RH+ H + Y C +CGK F ++L H+++H
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 822 GERPFSCHICGKTSTTKSNHNKHVKT 847
G +P+ C+IC K + + ++HV +
Sbjct: 62 GIKPYECNICAKRFMWRDSFHRHVTS 87
Score = 75.2 bits (186), Expect = 2e-16
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 537 CSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRH 596
C K+F K HM HL ++PY C VC K F L H HTG P+ CN+C +
Sbjct: 15 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 597 FKRYSNLAQHKKVIH 611
F + +H +
Sbjct: 75 FMWRDSFHRH---VT 86
Score = 72.9 bits (180), Expect = 1e-15
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPC 590
P C VC K F K L HM+ H IKPY+C++C K F + S H++ + +
Sbjct: 37 PYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRF--MWRDSFHRHVTSCTKSYEA 94
Query: 591 NMCDRHFKRYSNLA 604
+++ S +
Sbjct: 95 AKAEQNTTEASGPS 108
Score = 65.5 bits (161), Expect = 3e-13
Identities = 28/177 (15%), Positives = 43/177 (24%), Gaps = 71/177 (40%)
Query: 551 MRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVI 610
K Y C C KSF + H + H G P+ C +C + FK +L H K+
Sbjct: 2 SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI- 59
Query: 611 HLKKKKIKDFYCHCGEIFQSRGKLLWHQETHATVPKQCTYCTEKFTHTSSLTRHIRKNHD 670
H G K P +C C ++F S
Sbjct: 60 ------------HTGI------K-----------PYECNICAKRFMWRDSF--------- 81
Query: 671 PRYLPVDRKKTDENVNCDICKIVVLKSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNL 727
H + K + +++
Sbjct: 82 -------------------------------HRHVTSCTKSYEAAKAEQNTTEASGP 107
Score = 62.8 bits (154), Expect = 3e-12
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 790 REHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
K Y C CGK+F H+ +H G RP+ C +CGK K + H+K H
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding
protein, transcription/DNA complex; HET: DNA; 1.60A {Mus
musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A
1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A*
1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Length = 90
Score = 86.8 bits (216), Expect = 8e-21
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 768 RPFTCNY--CGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERP 825
RP+ C C R+F + + RH+R H +K + C IC + F RS +LT H+R H GE+P
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 826 FSCHICGKTSTTKSNHNKHVKTH 848
F+C ICG+ +H K H
Sbjct: 63 FACDICGRKFARSDERKRHTKIH 85
Score = 84.1 bits (209), Expect = 6e-20
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 531 PLPCPV--CSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPF 588
P CPV C + F SLT H+R H KP++C +C ++F + L+ H THTG PF
Sbjct: 4 PYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 589 PCNMCDRHFKRYSNLAQHKKVIHLKKK 615
C++C R F R +H K IHL++K
Sbjct: 64 ACDICGRKFARSDERKRHTK-IHLRQK 89
Score = 78.7 bits (195), Expect = 5e-18
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 741 PFKCKS--CNRGFYSSSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKY 798
P+ C C+R F S H+R H +PF C C R F R + H+R H +K +
Sbjct: 4 PYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 799 SCTICGKTFHRSYYLTAHVRVHNGER 824
+C ICG+ F RS H ++H ++
Sbjct: 64 ACDICGRKFARSDERKRHTKIHLRQK 89
Score = 66.0 bits (162), Expect = 2e-13
Identities = 32/111 (28%), Positives = 42/111 (37%), Gaps = 32/111 (28%)
Query: 558 KPYKCDV--CDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKK 615
+PY C V CD+ F + L+ H HTG PF C +C R+F R +L H +
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT------ 56
Query: 616 KIKDFYCHCGEIFQSRGKLLWHQETHATVPKQCTYCTEKFTHTSSLTRHIR 666
H GE K P C C KF + RH +
Sbjct: 57 -------HTGE------K-----------PFACDICGRKFARSDERKRHTK 83
Score = 62.9 bits (154), Expect = 2e-12
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 697 STLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKSCNRGFYS 753
+L H+RIH KPF C +C ++F +L H R H PF C C R F
Sbjct: 20 GSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-----RTHTGEKPFACDICGRKFAR 74
Query: 754 SSEYQAHLRSH 764
S E + H + H
Sbjct: 75 SDERKRHTKIH 85
Score = 46.3 bits (111), Expect = 1e-06
Identities = 25/114 (21%), Positives = 31/114 (27%), Gaps = 41/114 (35%)
Query: 623 HCGEIFQSRGKLLWHQETHAT--VPKQCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKK 680
C F G L H H T P QC C F+ + LT
Sbjct: 11 SCDRRFSQSGSLTRHIRIH-TGQKPFQCRICMRNFSRSDHLTT----------------- 52
Query: 681 TDENVNCDICKIVVLKSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
H+R H KPF+C +C + F H H
Sbjct: 53 ---------------------HIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein,
DNA- binding, transcription, C2H2-type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1
Length = 96
Score = 86.7 bits (216), Expect = 1e-20
Identities = 30/81 (37%), Positives = 38/81 (46%)
Query: 768 RPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFS 827
P C CG+ F RK H+R H K Y C C S L H+R+H+ ERPF
Sbjct: 7 GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFK 66
Query: 828 CHICGKTSTTKSNHNKHVKTH 848
C IC S S H+++H
Sbjct: 67 CQICPYASRNSSQLTVHLRSH 87
Score = 85.9 bits (214), Expect = 1e-20
Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPC 590
P C VC K F K L HMR H +KPYKC CD + + L+ H H+ PF C
Sbjct: 8 PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC 67
Query: 591 NMCDRHFKRYSNLAQHKKVIH 611
+C + S L H + H
Sbjct: 68 QICPYASRNSSQLTVHLR-SH 87
Score = 85.9 bits (214), Expect = 2e-20
Identities = 25/88 (28%), Positives = 41/88 (46%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSC 800
P KC+ C + F + + H+R H ++P+ C C + +H+R H ++ + C
Sbjct: 8 PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC 67
Query: 801 TICGKTFHRSYYLTAHVRVHNGERPFSC 828
IC S LT H+R H G+ S
Sbjct: 68 QICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 71.7 bits (177), Expect = 2e-15
Identities = 30/114 (26%), Positives = 43/114 (37%), Gaps = 30/114 (26%)
Query: 553 THLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHL 612
+ P+KC+VC K F KL H HTG P+ C CD S+L +H ++
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI--- 58
Query: 613 KKKKIKDFYCHCGEIFQSRGKLLWHQETHATVPKQCTYCTEKFTHTSSLTRHIR 666
H E + P +C C ++S LT H+R
Sbjct: 59 ----------HSDE------R-----------PFKCQICPYASRNSSQLTVHLR 85
Score = 67.4 bits (166), Expect = 6e-14
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 509 CDTCSEVFDKLKDYQEHIKNVH----PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDV 564
C+ C + F + + H H P C C SL H+R H +P+KC +
Sbjct: 11 CEVCGKCFSRKDKLKTH-MRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 565 CDKSFVTAQKLSDHKNTHTGNAPFPC 590
C + + +L+ H +HTG++
Sbjct: 70 CPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 62.8 bits (154), Expect = 2e-12
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 696 KSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKSCNRGFY 752
K LK+HMR H KP+ C C + +L H R+H PFKC+ C
Sbjct: 21 KDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL-----RIHSDERPFKCQICPYASR 75
Query: 753 SSSEYQAHLRSHRNIRPFTC 772
+SS+ HLRSH +
Sbjct: 76 NSSQLTVHLRSHTGDSGPSS 95
Score = 55.5 bits (135), Expect = 7e-10
Identities = 30/136 (22%), Positives = 41/136 (30%), Gaps = 44/136 (32%)
Query: 581 THTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQET 640
+ + P C +C + F R L H + H G K
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRC-------------HTGV------K------- 35
Query: 641 HATVPKQCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDEN-VNCDIC-KIVVLKST 698
P +C C +SSL +H+R H +DE C IC S
Sbjct: 36 ----PYKCKTCDYAAADSSSLNKHLRI-H-----------SDERPFKCQICPYASRNSSQ 79
Query: 699 LKSHMRIHDNAKPFSC 714
L H+R H S
Sbjct: 80 LTVHLRSHTGDSGPSS 95
Score = 35.5 bits (83), Expect = 0.008
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 820 HNGERPFSCHICGKTSTTKSNHNKHVKTH 848
P C +CGK + K H++ H
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCH 31
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding,
transcription, metal-binding, DNA, protein, nucleus,
activator; 1.70A {Mus musculus} PDB: 2wbu_A
Length = 89
Score = 84.5 bits (210), Expect = 5e-20
Identities = 34/85 (40%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 530 HPLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDV--CDKSFVTAQKLSDHKNTHTGNAP 587
H C KT+ L H+RTH KPY CD C F + +L+ H HTG+ P
Sbjct: 6 HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP 65
Query: 588 FPCNMCDRHFKRYSNLAQHKKVIHL 612
F C CDR F R +LA H K H
Sbjct: 66 FQCQKCDRAFSRSDHLALHMK-RHF 89
Score = 81.8 bits (203), Expect = 4e-19
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Query: 764 HRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTI--CGKTFHRSYYLTAHVRVHN 821
CG+ + + + H+R H +K Y C CG F RS LT H R H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 822 GERPFSCHICGKTSTTKSNHNKHVKTH 848
G RPF C C + + + H+K H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 63.3 bits (155), Expect = 1e-12
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 791 EHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHI--CGKTSTTKSNHNKHVKTH 848
+ CGKT+ +S +L AH+R H GE+P+ C CG +H + H
Sbjct: 1 KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Score = 61.0 bits (149), Expect = 9e-12
Identities = 26/96 (27%), Positives = 32/96 (33%), Gaps = 28/96 (29%)
Query: 697 STLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSE 756
S LK+H+R H KP+ C C F S E
Sbjct: 21 SHLKAHLRTHTGEKPYHCDW----------------------------DGCGWKFARSDE 52
Query: 757 YQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREH 792
H R H RPF C C R F R + H++ H
Sbjct: 53 LTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 59.9 bits (146), Expect = 2e-11
Identities = 23/91 (25%), Positives = 32/91 (35%), Gaps = 7/91 (7%)
Query: 554 HLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNM--CDRHFKRYSNLAQHKKVIH 611
C K++ + L H THTG P+ C+ C F R L +H + H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR-KH 60
Query: 612 LKKKKIKDFYC-HCGEIFQSRGKLLWHQETH 641
+ F C C F L H + H
Sbjct: 61 TGHRP---FQCQKCDRAFSRSDHLALHMKRH 88
Score = 47.9 bits (115), Expect = 3e-07
Identities = 23/94 (24%), Positives = 31/94 (32%), Gaps = 20/94 (21%)
Query: 647 QCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDE------NVNCDICKIVVLKSTLK 700
C + +T +S L H+R H T E C L
Sbjct: 9 DYAGCGKTYTKSSHLKAHLRT-H-----------TGEKPYHCDWDGCG--WKFARSDELT 54
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
H R H +PF C C ++F +L LH H
Sbjct: 55 RHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1
Length = 95
Score = 83.3 bits (207), Expect = 1e-19
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 769 PFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGE--RPF 826
C CG+ F ++ RH H +K YSC +CG F R ++ HVR H+G +P+
Sbjct: 7 GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY 66
Query: 827 SCHICGKTSTTKSNHNKHVKTHHARE 852
C CGK + + N H+K H+
Sbjct: 67 ICQSCGKGFSRPDHLNGHIKQVHSGP 92
Score = 82.9 bits (206), Expect = 2e-19
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNA--PF 588
+ C +C K F L H +H KPY C VC F ++S H +H G+ P+
Sbjct: 7 GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY 66
Query: 589 PCNMCDRHFKRYSNLAQHKKVIH 611
C C + F R +L H K +H
Sbjct: 67 ICQSCGKGFSRPDHLNGHIKQVH 89
Score = 82.2 bits (204), Expect = 4e-19
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREH--ELKKKY 798
C+ C + F H SH +P++C CG +F RK HVR H + K Y
Sbjct: 7 GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY 66
Query: 799 SCTICGKTFHRSYYLTAHV-RVHNGER 824
C CGK F R +L H+ +VH+G
Sbjct: 67 ICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 71.8 bits (177), Expect = 1e-15
Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 28/112 (25%)
Query: 558 KPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKI 617
C++C K F L+ HK +H+G P+ C +C FKR ++ H +
Sbjct: 6 SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS-------- 57
Query: 618 KDFYCHCGEIFQSRGKLLWHQETHATVPKQCTYCTEKFTHTSSLTRHIRKNH 669
H G + + P C C + F+ L HI++ H
Sbjct: 58 -----HDGSVGK---------------PYICQSCGKGFSRPDHLNGHIKQVH 89
Score = 69.4 bits (171), Expect = 9e-15
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 796 KKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+C ICGK F Y+L H H+GE+P+SC +CG K + HV++H
Sbjct: 6 SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH 58
Score = 63.7 bits (156), Expect = 1e-12
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCK 745
C+IC KI L H H KP+SC VC F K + H +H + P+ C+
Sbjct: 10 CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 746 SCNRGFYSSSEYQAHLRSH 764
SC +GF HL H
Sbjct: 70 SCGKGFSRPD----HLNGH 84
Score = 57.9 bits (141), Expect = 1e-10
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 508 RCDTCSEVFDKLKDYQEHIKNVH----PLPCPVCSKTFPSKPSLTLHMRTHL--KIKPYK 561
C+ C ++F + H K H P CPVC F K ++ H+R+H KPY
Sbjct: 9 ACEICGKIFRDVYHLNRH-KLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 562 CDVCDKSFVTAQKLSDH-KNTHTG 584
C C K F L+ H K H+G
Sbjct: 68 CQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 37.5 bits (88), Expect = 0.002
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 820 HNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+G +C ICGK + N+H +H
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSH 30
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 86
Score = 83.0 bits (206), Expect = 1e-19
Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 8/83 (9%)
Query: 760 HLRSHRNI----RPFTCNYCGRKFIRKFNCIRHVR----EHELKKKYSCTICGKTFHRSY 811
S +P+ C++C + F +K H + + + + C+ CGKTF R
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 812 YLTAHVRVHNGERPFSCHICGKT 834
+ H G G +
Sbjct: 62 TMARHADNCAGPDGVEGENSGPS 84
Score = 72.2 bits (178), Expect = 9e-16
Identities = 21/110 (19%), Positives = 33/110 (30%), Gaps = 26/110 (23%)
Query: 698 TLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSEY 757
+ S R H KP++C+ C K+F K L +H +
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH---------------------- 39
Query: 758 QAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTF 807
+ F C+ CG+ F R+ RH G +
Sbjct: 40 ----DPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85
Score = 71.0 bits (175), Expect = 3e-15
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 546 SLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTG----NAPFPCNMCDRHFKRYS 601
S RTH KPY C CDK+F Q L H + A F C+ C + F R +
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 602 NLAQHKKVIH 611
+A+H
Sbjct: 62 TMARHAD-NC 70
Score = 69.1 bits (170), Expect = 9e-15
Identities = 15/71 (21%), Positives = 23/71 (32%), Gaps = 4/71 (5%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTH----LKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNA 586
P C C KTF K L +H + + + C C K+F ++ H + G
Sbjct: 15 PYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPD 74
Query: 587 PFPCNMCDRHF 597
Sbjct: 75 GVEGENSGPSS 85
Score = 64.1 bits (157), Expect = 6e-13
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 786 IRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGE----RPFSCHICGKTSTTKSNH 841
R H +K Y+C+ C KTF + L H + ++ F C CGKT T ++
Sbjct: 4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTM 63
Query: 842 NKHVKTH 848
+H
Sbjct: 64 ARHADNC 70
Score = 56.8 bits (138), Expect = 2e-10
Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
Query: 575 LSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYC-HCGEIFQSRGK 633
THTG P+ C+ CD+ F++ L H K H F C CG+ F R
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 634 LLWHQETHATVPK--QCTYC 651
+ H + P +
Sbjct: 63 MARHADNC-AGPDGVEGENS 81
Score = 47.5 bits (114), Expect = 4e-07
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 813 LTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTHH 849
+ R H GE+P++C C KT K + H K +H
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH 39
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine
zipper, X-RAY crystallography, structure-based design,
zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1
g.37.1.1 PDB: 1xf7_A
Length = 88
Score = 81.8 bits (203), Expect = 4e-19
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 767 IRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPF 826
++PF C C R F R + H+R H +K ++C ICG+ F RS H + P
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPI 59
Query: 827 SCHICGKTSTTKS---NHNKHVKTH 848
+ + N +K
Sbjct: 60 LEDKVEELLSKNYHLENEVARLKKL 84
Score = 80.6 bits (200), Expect = 1e-18
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 529 VHPLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPF 588
+ P C +C + F LT H+RTH KP+ CD+C + F + + H++ P
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHIL-PI 59
Query: 589 PCNMCDRHFKRYSNLAQHKK 608
+ + + +L
Sbjct: 60 LEDKVEELLSKNYHLENEVA 79
Score = 69.1 bits (170), Expect = 1e-14
Identities = 23/110 (20%), Positives = 37/110 (33%), Gaps = 31/110 (28%)
Query: 557 IKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKK 616
+KP++C +C ++F + L+ H THTG PF C++C R F R +H+ I
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD-IQHIL-- 57
Query: 617 IKDFYCHCGEIFQSRGKLLWHQETHATVPKQCTYCTEKFTHTSSLTRHIR 666
P E + L +
Sbjct: 58 ----------------------------PILEDKVEELLSKNYHLENEVA 79
Score = 68.3 bits (168), Expect = 2e-14
Identities = 29/119 (24%), Positives = 41/119 (34%), Gaps = 36/119 (30%)
Query: 710 KPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRP 769
KPF C +C ++F SR S H+R+H +P
Sbjct: 2 KPFQCRICMRNF--------------SR----------------SDHLTTHIRTHTGEKP 31
Query: 770 FTCNYCGRKFIRKFNCIRHVREH-ELKKKYSCTICGKTFHRSYYLTAHV---RVHNGER 824
F C+ CGRKF R RH + ++Y+L V + GER
Sbjct: 32 FACDICGRKFARSDERKRHRDIQHI--LPILEDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 67.1 bits (165), Expect = 6e-14
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 796 KKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTHH 849
K + C IC + F RS +LT H+R H GE+PF+C ICG+ +H H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH 55
Score = 62.9 bits (154), Expect = 1e-12
Identities = 17/82 (20%), Positives = 26/82 (31%), Gaps = 7/82 (8%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCK 745
C IC + L +H+R H KPF+C +C + F H+ P
Sbjct: 6 CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHIL---PILED 62
Query: 746 SCNRGFYSSS---EYQAHLRSH 764
+ A L+
Sbjct: 63 KVEELLSKNYHLENEVARLKKL 84
Score = 46.7 bits (112), Expect = 8e-07
Identities = 23/153 (15%), Positives = 34/153 (22%), Gaps = 71/153 (46%)
Query: 587 PFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQETHATVPK 646
PF C +C R+F R +L H + H GE K P
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRT-------------HTGE------K-----------PF 32
Query: 647 QCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDENVNCDICKIVVLKSTLKSHMRIH 706
C C KF + R H I
Sbjct: 33 ACDICGRKFARSDERKR--------------------------------------HRDIQ 54
Query: 707 DNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMH 739
+ P ++ ++L +
Sbjct: 55 -HILPILEDKVEELLSKNYHLENEVARL--KKL 84
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain,
protein-DNA complex, DNA-B metal-binding, nucleus; HET:
DNA; NMR {Rattus norvegicus}
Length = 82
Score = 81.7 bits (203), Expect = 4e-19
Identities = 28/79 (35%), Positives = 38/79 (48%)
Query: 770 FTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCH 829
F C CG+ F R H+ H + Y C CGK FH+ + H +H GE+P C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 830 ICGKTSTTKSNHNKHVKTH 848
+CGK + SN H + H
Sbjct: 62 VCGKAFSQSSNLITHSRKH 80
Score = 77.5 bits (192), Expect = 1e-17
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 534 CPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMC 593
C +C K+F +L+ H+ H +PY C C K F + H HTG P C +C
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 594 DRHFKRYSNLAQHKKVIH 611
+ F + SNL H + H
Sbjct: 64 GKAFSQSSNLITHSR-KH 80
Score = 74.8 bits (185), Expect = 1e-16
Identities = 32/81 (39%), Positives = 44/81 (54%)
Query: 742 FKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
F CK C + F SS HL H + RP+ C YCG++F +K + +H H +K + C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 802 ICGKTFHRSYYLTAHVRVHNG 822
+CGK F +S L H R H G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 59.7 bits (146), Expect = 2e-11
Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 30/107 (28%)
Query: 560 YKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKD 619
+ C +C KSF + LS H H+ P+PC C + F + S++ +H +
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI---------- 51
Query: 620 FYCHCGEIFQSRGKLLWHQETHATVPKQCTYCTEKFTHTSSLTRHIR 666
H GE K P +C C + F+ +S+L H R
Sbjct: 52 ---HTGE------K-----------PHKCQVCGKAFSQSSNLITHSR 78
Score = 57.0 bits (139), Expect = 1e-10
Identities = 22/54 (40%), Positives = 26/54 (48%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTG 584
P PC C K F K + H H KP+KC VC K+F + L H HTG
Sbjct: 29 PYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 55.9 bits (136), Expect = 4e-10
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PF 742
C IC K STL +H+ IH + +P+ C C K F+ K ++ H +H P
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT-----FIHTGEKPH 58
Query: 743 KCKSCNRGFYSSSEYQAHLRSH 764
KC+ C + F SS H R H
Sbjct: 59 KCQVCGKAFSQSSNLITHSRKH 80
Score = 48.2 bits (116), Expect = 2e-07
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 14/90 (15%)
Query: 647 QCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDEN-VNCDIC-KIVVLKSTLKSHMR 704
C C + F +S+L+ H+ H +D C C K KS +K H
Sbjct: 3 DCKICGKSFKRSSTLSTHLLI-H-----------SDTRPYPCQYCGKRFHQKSDMKKHTF 50
Query: 705 IHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
IH KP C VC K+F NL H H
Sbjct: 51 IHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80
>2j7j_A Transcription factor IIIA; zinc finger module, alternative
initiation, nuclear protein, phosphorylation,
hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus
laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B
2hgh_A
Length = 85
Score = 81.5 bits (202), Expect = 5e-19
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 2/85 (2%)
Query: 529 VHPLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDV--CDKSFVTAQKLSDHKNTHTGNA 586
++ C K F L +H +H + PY+C CDK F +L H+ H G
Sbjct: 1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60
Query: 587 PFPCNMCDRHFKRYSNLAQHKKVIH 611
+ C K ++ +H H
Sbjct: 61 CKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 70.7 bits (174), Expect = 2e-15
Identities = 22/106 (20%), Positives = 33/106 (31%), Gaps = 26/106 (24%)
Query: 744 CKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTIC 803
++C + F ++ + H SH P+ C + G C
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEG--------------------------C 39
Query: 804 GKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTHH 849
K F L H +VH G C T + + KHV H
Sbjct: 40 DKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 59.2 bits (144), Expect = 3e-11
Identities = 25/114 (21%), Positives = 39/114 (34%), Gaps = 34/114 (29%)
Query: 560 YKCDV--CDKSFVTAQKLSDHKNTHTGNAPFPCN--MCDRHFKRYSNLAQHKKVIHLKKK 615
Y C C K+F +L H+ +HT P+ C CD+ F S L +H+KV
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV------ 55
Query: 616 KIKDFYCHCGEIFQSRGKLLWHQETHATVPKQCTYCTEKFTHTSSLTRHIRKNH 669
H G K+ C+ + +H+ + H
Sbjct: 56 -------HAGYP-----------------CKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 54.2 bits (131), Expect = 2e-09
Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Query: 697 STLKSHMRIHDNAKPFSCTV--CKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSS 754
+ LK H H P+ C C K F L H+ H + K SC+ +
Sbjct: 17 NQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTW 74
Query: 755 SEYQAHLR 762
+ Y H+
Sbjct: 75 TLYLKHVA 82
Score = 36.4 bits (85), Expect = 0.004
Identities = 19/92 (20%), Positives = 26/92 (28%), Gaps = 22/92 (23%)
Query: 648 CTY--CTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDE------NVNCDICKIVVLKSTL 699
C + C + F + L H H T + + CD K L S L
Sbjct: 4 CHFENCGKAFKKHNQLKVHQFS-H-----------TQQLPYECPHEGCD--KRFSLPSRL 49
Query: 700 KSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQ 731
K H ++H C T H
Sbjct: 50 KRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHV 81
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND,
transcription factor, kruppel-like factor, GC-box
promoter elements, structural genomics; NMR {Homo
sapiens}
Length = 100
Score = 81.5 bits (202), Expect = 6e-19
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 527 KNVHPLPCPVCSKTFPSKPS-LTLHMRTHLKIKPYKC--DVCDKSFVTAQKLSDHKNTHT 583
+ +H P C+K + +K S L H+RTH KPYKC + CD F + +L+ H HT
Sbjct: 13 RRIHYCDYPGCTKVY-TKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHT 71
Query: 584 GNAPFPCNMCDRHFKRYSNLAQHKKV 609
G PF C +C+R F R +LA H K
Sbjct: 72 GAKPFQCGVCNRSFSRSDHLALHMKR 97
Score = 78.4 bits (194), Expect = 7e-18
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 754 SSEYQAHLRSHRNIRPFTCN--YCGRKFIRKFNCIRHVREHELKKKYSCTI--CGKTFHR 809
SS R R C+ C + + + + H+R H +K Y CT C F R
Sbjct: 2 SSGSSGPDLEKR--RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 810 SYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
S LT H R H G +PF C +C ++ + + H+K H
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 66.1 bits (162), Expect = 2e-13
Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 8/100 (8%)
Query: 696 KSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKC--KSCNRGFYS 753
RIH P C K + +L H TH P+KC + C+ F
Sbjct: 6 SGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTG--EKPYKCTWEGCDWRFAR 59
Query: 754 SSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHE 793
S E H R H +PF C C R F R + H++ H+
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 58.0 bits (141), Expect = 1e-10
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 9/98 (9%)
Query: 494 FLPPSLTSIKNKQRRCD--TCSEVFDKLKDYQEHIKNVH----PLPC--PVCSKTFPSKP 545
K + CD C++V+ K + H++ H P C C F
Sbjct: 3 SGSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSD 61
Query: 546 SLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHT 583
LT H R H KP++C VC++SF + L+ H H
Sbjct: 62 ELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 57.6 bits (140), Expect = 1e-10
Identities = 29/129 (22%), Positives = 39/129 (30%), Gaps = 36/129 (27%)
Query: 540 TFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNM--CDRHF 597
+ S R H P C K + + L H THTG P+ C CD F
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 598 KRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQETHATVPKQCTYCTEKFTH 657
R L +H + H G P QC C F+
Sbjct: 58 ARSDELTRHYRK-------------HTGAK-----------------PFQCGVCNRSFSR 87
Query: 658 TSSLTRHIR 666
+ L H++
Sbjct: 88 SDHLALHMK 96
Score = 55.7 bits (135), Expect = 7e-10
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 697 STLKSHMRIHDNAKPFSCTV--CKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSS 754
S LK+H+R H KP+ CT C F L H H PF+C CNR F S
Sbjct: 31 SHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTG--AKPFQCGVCNRSFSRS 88
Query: 755 SEYQAHLRSHRN 766
H++ H+N
Sbjct: 89 DHLALHMKRHQN 100
Score = 44.2 bits (105), Expect = 8e-06
Identities = 35/169 (20%), Positives = 51/169 (30%), Gaps = 74/169 (43%)
Query: 568 SFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEI 627
S ++ + + H + P C + + + S+L H + H GE
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRT-------------HTGE- 43
Query: 628 FQSRGKLLWHQETHATVPKQCTY--CTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDENV 685
K P +CT+ C +F + LTR
Sbjct: 44 -----K-----------PYKCTWEGCDWRFARSDELTR---------------------- 65
Query: 686 NCDICKIVVLKSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
H R H AKPF C VC +SF +L LH H
Sbjct: 66 ----------------HYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 77
Score = 77.2 bits (191), Expect = 1e-17
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 546 SLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTG--NAPFPCNMCDRHFKRYSNL 603
S RTH KPY+C +C F + + H A F C CD R S+L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 604 AQHKKVIH 611
H + H
Sbjct: 62 GVHLRKQH 69
Score = 75.6 bits (187), Expect = 4e-17
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Query: 758 QAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREH--ELKKKYSCTICGKTFHRSYYLTA 815
+ R+H +P+ C C +F + H+ + E K+ C C R L
Sbjct: 4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGV 63
Query: 816 HVR-VHNGERPFS 827
H+R H+ P S
Sbjct: 64 HLRKQHSYSGPSS 76
Score = 69.9 bits (172), Expect = 4e-15
Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGE--RPFSCHICGKTSTTKSNHNKH 844
R H +K Y C IC F +S + H+ + E F C C KS+ H
Sbjct: 5 SSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVH 64
Query: 845 VKTHHARE 852
++ H+
Sbjct: 65 LRKQHSYS 72
Score = 67.5 bits (166), Expect = 3e-14
Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 1/75 (1%)
Query: 698 TLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSEY 757
+ S R H KP+ C +C F + +H + F C C+ S+
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 758 QAHLRS-HRNIRPFT 771
HLR H P +
Sbjct: 62 GVHLRKQHSYSGPSS 76
Score = 61.8 bits (151), Expect = 3e-12
Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHL--KIKPYKCDVCDKSFVTAQKLSDH-KNTHTGNAP 587
P C +C F ++ +H+ + + C CD L H + H+ + P
Sbjct: 15 PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP 74
Query: 588 F 588
Sbjct: 75 S 75
Score = 53.7 bits (130), Expect = 2e-09
Identities = 17/96 (17%), Positives = 24/96 (25%), Gaps = 28/96 (29%)
Query: 574 KLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGK 633
TH+G P+ C +C F + + H E
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQ-------------KHTENVA---- 44
Query: 634 LLWHQETHATVPKQCTYCTEKFTHTSSLTRHIRKNH 669
C +C S L H+RK H
Sbjct: 45 -----------KFHCPHCDTVIARKSDLGVHLRKQH 69
Score = 51.4 bits (124), Expect = 1e-08
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 813 LTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTHH 849
+ R H+GE+P+ C+IC T H+ H
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKH 39
Score = 48.7 bits (117), Expect = 1e-07
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Query: 687 CDIC-KIVVLKSTLKSHMRIH--DNAKPFSCTVCKKSFYTKWNLGLHQ 731
C IC T+K H+ +N F C C K +LG+H
Sbjct: 18 CYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL 65
Score = 44.8 bits (107), Expect = 3e-06
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 20/89 (22%)
Query: 632 GKLLWHQETHAT--VPKQCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDENV---N 686
G TH + P +C C +FT + ++ HI + K ENV +
Sbjct: 1 GSSGSSGRTH-SGEKPYECYICHARFTQSGTMKMHILQ------------KHTENVAKFH 47
Query: 687 CDIC-KIVVLKSTLKSHMR-IHDNAKPFS 713
C C ++ KS L H+R H + P S
Sbjct: 48 CPHCDTVIARKSDLGVHLRKQHSYSGPSS 76
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 79
Score = 75.3 bits (186), Expect = 6e-17
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 768 RPFTCNY--CGRKFIRKFNCIRHVR-EHELKKKYSCT--ICGKTFHRSYYLTAHVRVHNG 822
C++ CGR F + H + +H +K +SC CGK+F+ +L H+++H+
Sbjct: 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65
Query: 823 ERPFSCHICGKT 834
R + C G +
Sbjct: 66 TRDYICEFSGPS 77
Score = 64.5 bits (158), Expect = 3e-13
Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Query: 531 PLPCPV--CSKTFPSKPSLTLHMR-THLKIKPYKCD--VCDKSFVTAQKLSDHKNTHTGN 585
+PC C + F ++ L H + H+ K + C C KSF + L +H H+
Sbjct: 7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDT 66
Query: 586 APFPCNMCDRHF 597
+ C
Sbjct: 67 RDYICEFSGPSS 78
Score = 62.2 bits (152), Expect = 2e-12
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 796 KKYSCTI--CGKTFHRSYYLTAHVRV-HNGERPFSC--HICGKTSTTKSNHNKHVKTH 848
C CG+ F YL H + H ++ FSC CGK+ K + +H+K H
Sbjct: 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH 63
Score = 61.4 bits (150), Expect = 4e-12
Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Query: 741 PFKCKS--CNRGFYSSSEYQAHLR-SHRNIRPFTCNY--CGRKFIRKFNCIRHVREHELK 795
C C R F + H + H + + F+C CG+ F K + H++ H
Sbjct: 7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDT 66
Query: 796 KKYSCTICGKTF 807
+ Y C G +
Sbjct: 67 RDYICEFSGPSS 78
Score = 56.4 bits (137), Expect = 2e-10
Identities = 20/77 (25%), Positives = 28/77 (36%), Gaps = 10/77 (12%)
Query: 558 KPYKCDV--CDKSFVTAQKLSDHK-NTHTGNAPFPCN--MCDRHFKRYSNLAQHKKVIHL 612
CD C + F Q L+ HK H F C C + F +L +H K +H
Sbjct: 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK-LHS 64
Query: 613 KKKKIKDFYC-HCGEIF 628
+D+ C G
Sbjct: 65 DT---RDYICEFSGPSS 78
Score = 51.8 bits (125), Expect = 1e-08
Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 6/64 (9%)
Query: 512 CSEVFDKLKDYQEHIKNVH----PLPCP--VCSKTFPSKPSLTLHMRTHLKIKPYKCDVC 565
C +F + H K H CP C K+F K L HM+ H + Y C+
Sbjct: 15 CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74
Query: 566 DKSF 569
S
Sbjct: 75 GPSS 78
Score = 49.9 bits (120), Expect = 5e-08
Identities = 16/85 (18%), Positives = 26/85 (30%), Gaps = 21/85 (24%)
Query: 645 PKQCTY--CTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDE------NVNCDICKIVVLK 696
C + C F++ L H + H + C K K
Sbjct: 7 GMPCDFPGCGRIFSNRQYLNHHKKYQH-----------IHQKSFSCPEPACG--KSFNFK 53
Query: 697 STLKSHMRIHDNAKPFSCTVCKKSF 721
LK HM++H + + + C S
Sbjct: 54 KHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 46.8 bits (112), Expect = 7e-07
Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 11/62 (17%)
Query: 696 KSTLKSHMRI-HDNAKPFSCT--VCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKSCNR 749
+ L H + H + K FSC C KSF K +L H ++H + C+
Sbjct: 22 RQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHM-----KLHSDTRDYICEFSGP 76
Query: 750 GF 751
Sbjct: 77 SS 78
Score = 46.4 bits (111), Expect = 9e-07
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 582 HTGNAPFPCNM--CDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQE 639
+G++ PC+ C R F L HKK H+ +K CG+ F + L H +
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 640 TH-ATVPKQCTYC 651
H T C +
Sbjct: 62 LHSDTRDYICEFS 74
Score = 34.8 bits (81), Expect = 0.009
Identities = 8/35 (22%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 820 HNGERPFSCHI--CGKTSTTKSNHNKHVKTHHARE 852
+G C CG+ + + N H K H +
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQ 36
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 78
Score = 74.4 bits (183), Expect = 1e-16
Identities = 16/65 (24%), Positives = 20/65 (30%), Gaps = 3/65 (4%)
Query: 796 KKYSCTICGKTFHRSYYLTAHVRVH---NGERPFSCHICGKTSTTKSNHNKHVKTHHARE 852
C ICG T + L H R H F C CGK + H H
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65
Query: 853 TINTE 857
+ +
Sbjct: 66 LLAPQ 70
Score = 68.6 bits (168), Expect = 1e-14
Identities = 15/66 (22%), Positives = 23/66 (34%), Gaps = 3/66 (4%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKI---KPYKCDVCDKSFVTAQKLSDHKNTHTGNAP 587
L C +C T K SL H R H + + C+ C K F ++ H++
Sbjct: 7 GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL 66
Query: 588 FPCNMC 593
Sbjct: 67 LAPQES 72
Score = 67.4 bits (165), Expect = 4e-14
Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 558 KPYKCDVCDKSFVTAQKLSDHKNTHT---GNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
+C++C + L+ H+ H FPC C + F++ ++A H+ H
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62
Score = 67.0 bits (164), Expect = 5e-14
Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 4/72 (5%)
Query: 768 RPFTCNYCGRKFIRKFNCIRHVREHELK---KKYSCTICGKTFHRSYYLTAHVRVHNGE- 823
C CG +K + H R+H ++ C CGK F + + AH +
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65
Query: 824 RPFSCHICGKTS 835
G +S
Sbjct: 66 LLAPQESSGPSS 77
Score = 61.3 bits (149), Expect = 5e-12
Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Query: 710 KPFSCTVCKKSFYTKWNLGLHQWTH-VSRMHMPFKCKSCNRGFYSSSEYQAHLR-SHRNI 767
C +C + K +L HQ H + + F C+ C + F AH SH +
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65
Query: 768 RPFTCNYCG 776
G
Sbjct: 66 LLAPQESSG 74
Score = 55.1 bits (133), Expect = 8e-10
Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNA---KPFSCTVCKKSFYTKWNLGLHQWTH 734
C+IC K++L H R H F C C K F ++ H+
Sbjct: 10 CEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 43.2 bits (102), Expect = 1e-05
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 820 HNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+G C ICG T K++ N H + H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKH 30
Score = 40.1 bits (94), Expect = 1e-04
Identities = 15/79 (18%), Positives = 20/79 (25%), Gaps = 10/79 (12%)
Query: 645 PKQCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDENVNCDIC-KIVVLKSTLKSHM 703
QC C +SL H RK H C+ C K ++ +H
Sbjct: 7 GLQCEICGFTCRQKASLNWHQRK-HA-------ETVAALRFPCEFCGKRFEKPDSVAAHR 58
Query: 704 RI-HDNAKPFSCTVCKKSF 721
H S
Sbjct: 59 SKSHPALLLAPQESSGPSS 77
Score = 38.5 bits (90), Expect = 6e-04
Identities = 13/70 (18%), Positives = 20/70 (28%), Gaps = 9/70 (12%)
Query: 508 RCDTCSEVFDKLKDYQEHIKNVH-------PLPCPVCSKTFPSKPSLTLHMRT-HLKIKP 559
+C+ C + H + H PC C K F S+ H H +
Sbjct: 9 QCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 560 YKCDVCDKSF 569
+ S
Sbjct: 68 APQESSGPSS 77
Score = 27.4 bits (61), Expect = 4.9
Identities = 9/34 (26%), Positives = 12/34 (35%)
Query: 415 KKHACIYCKKTFTGWKLRKYHMKAEHPELFNEPE 448
+ C +C K F H HP L P+
Sbjct: 37 LRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ 70
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast
structural genomics consortiu PSI-biology, protein
structure initiative; NMR {Homo sapiens}
Length = 74
Score = 74.0 bits (183), Expect = 1e-16
Identities = 27/66 (40%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 546 SLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQ 605
H KPYKCD C SF L+ HK HTG P+ CN+C F R +NL
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 606 HKKVIH 611
H + IH
Sbjct: 64 HTR-IH 68
Score = 70.9 bits (175), Expect = 2e-15
Identities = 24/73 (32%), Positives = 35/73 (47%)
Query: 754 SSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYL 813
+ H + +P+ C+ C F K N H H +K Y C ICG F+R L
Sbjct: 2 GHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANL 61
Query: 814 TAHVRVHNGERPF 826
H R+H+GE+P+
Sbjct: 62 KTHTRIHSGEKPY 74
Score = 66.3 bits (163), Expect = 8e-14
Identities = 20/63 (31%), Positives = 27/63 (42%)
Query: 786 IRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHV 845
H K Y C C +F L +H VH GE+P+ C+ICG +N H
Sbjct: 6 HHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT 65
Query: 846 KTH 848
+ H
Sbjct: 66 RIH 68
Score = 60.5 bits (148), Expect = 7e-12
Identities = 19/58 (32%), Positives = 26/58 (44%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPF 588
P C C +F K +L H H KPY+C++C F L H H+G P+
Sbjct: 17 PYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74
Score = 57.8 bits (141), Expect = 7e-11
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Query: 695 LKSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKSCNRGF 751
+ H + + KP+ C C+ SF K NL H+ +H P++C C F
Sbjct: 1 MGHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHK-----TVHTGEKPYRCNICGAQF 55
Query: 752 YSSSEYQAHLRSH 764
+ + H R H
Sbjct: 56 NRPANLKTHTRIH 68
Score = 44.4 bits (106), Expect = 4e-06
Identities = 8/39 (20%), Positives = 16/39 (41%)
Query: 810 SYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
++ H + + ++P+ C C + K N H H
Sbjct: 2 GHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVH 40
Score = 41.3 bits (98), Expect = 5e-05
Identities = 17/93 (18%), Positives = 27/93 (29%), Gaps = 32/93 (34%)
Query: 575 LSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKL 634
H + + P+ C+ C F+ NLA
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLAS----------------------------- 35
Query: 635 LWHQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
H+ H P +C C +F ++L H R
Sbjct: 36 --HKTVHTGEKPYRCNICGAQFNRPANLKTHTR 66
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN
domain containing protein 16, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 77
Score = 70.9 bits (175), Expect = 2e-15
Identities = 25/74 (33%), Positives = 33/74 (44%)
Query: 753 SSSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYY 812
SS R R + C+ CG+ F + +H R H +K Y C CGK F + +
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61
Query: 813 LTAHVRVHNGERPF 826
L H RVH G P
Sbjct: 62 LIGHHRVHTGSGPS 75
Score = 68.6 bits (169), Expect = 1e-14
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 546 SLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQ 605
S + + YKCD C KSF + LS H+ THTG P+ C+ C + F + S+L
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 606 HKKVIH 611
H + +H
Sbjct: 65 HHR-VH 69
Score = 65.5 bits (161), Expect = 1e-13
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 786 IRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHV 845
R + +++Y C CGK+F S L+ H R H GE+P+ C CGK +S+ H
Sbjct: 7 GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHH 66
Query: 846 KTH 848
+ H
Sbjct: 67 RVH 69
Score = 57.5 bits (140), Expect = 1e-10
Identities = 24/58 (41%), Positives = 29/58 (50%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPF 588
C C K+F L+ H RTH KPYKCD C K+F+ L H HTG+ P
Sbjct: 18 RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75
Score = 54.4 bits (132), Expect = 1e-09
Identities = 18/72 (25%), Positives = 25/72 (34%), Gaps = 8/72 (11%)
Query: 696 KSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKSCNRGFY 752
+ + + C C KSF +L H+ R H P+KC C + F
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHR-----RTHTGEKPYKCDECGKAFI 57
Query: 753 SSSEYQAHLRSH 764
S H R H
Sbjct: 58 QRSHLIGHHRVH 69
Score = 44.4 bits (106), Expect = 4e-06
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 810 SYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
S R + C CGK+ + S+ +KH +TH
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 41
Score = 34.7 bits (81), Expect = 0.011
Identities = 20/138 (14%), Positives = 33/138 (23%), Gaps = 68/138 (49%)
Query: 575 LSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKL 634
+ + C+ C + F S+L++H++ H GE K
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRT-------------HTGE------K- 45
Query: 635 LWHQETHATVPKQCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDENVNCDICKIVV 694
P +C C + F S L
Sbjct: 46 ----------PYKCDECGKAFIQRSHLIG------------------------------- 64
Query: 695 LKSTLKSHMRIHDNAKPF 712
H R+H + P
Sbjct: 65 -------HHRVHTGSGPS 75
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double
helix, transcription/DNA complex; HET: DNA; 2.80A
{Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Length = 66
Score = 70.3 bits (173), Expect = 2e-15
Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 762 RSHRNIRPFTCNYCGRKFIRKFNCIRHVR--EHELKKKYSCTICGKTFHRSYYLTAHVRV 819
+ + C C R + N RH K Y C C K F R +TAHV++
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 820 HNG 822
+
Sbjct: 63 IHK 65
Score = 69.5 bits (171), Expect = 4e-15
Identities = 15/62 (24%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Query: 790 REHELKKKYSCTICGKTFHRSYYLTAHVRV--HNGERPFSCHICGKTSTTKSNHNKHVKT 847
E + Y C +C + + H + + C C K T K N HVK
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 848 HH 849
H
Sbjct: 63 IH 64
Score = 66.0 bits (162), Expect = 8e-14
Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 552 RTHLKIKPYKCDVCDKSFVTAQKLSDHKNT--HTGNAPFPCNMCDRHFKRYSNLAQHKKV 609
T Y+C VC + + H T +PC C + F R N+ H K+
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 610 IH 611
IH
Sbjct: 63 IH 64
Score = 58.7 bits (143), Expect = 3e-11
Identities = 13/64 (20%), Positives = 21/64 (32%)
Query: 704 RIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRS 763
+ + C VC + + N H T R + C C + F AH++
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 764 HRNI 767
I
Sbjct: 63 IHKI 66
Score = 55.3 bits (134), Expect = 5e-10
Identities = 13/56 (23%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRT--HLKIKPYKCDVCDKSFVTAQKLSDHKNTHTG 584
C VCS+ + + H T +K Y C C K F ++ H
Sbjct: 10 TYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 50.6 bits (122), Expect = 2e-08
Identities = 17/89 (19%), Positives = 28/89 (31%), Gaps = 28/89 (31%)
Query: 581 THTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQET 640
T G + C +C R + SN +H H K
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSH-----------KRNV------K------- 39
Query: 641 HATVPKQCTYCTEKFTHTSSLTRHIRKNH 669
C +C ++FT ++T H++ H
Sbjct: 40 ----VYPCPFCFKEFTRKDNMTAHVKIIH 64
Score = 45.6 bits (109), Expect = 1e-06
Identities = 17/90 (18%), Positives = 24/90 (26%), Gaps = 36/90 (40%)
Query: 645 PKQCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDENVNCDICKIVVLKSTLKSHMR 704
+C C+ +TH S+ RH +H
Sbjct: 10 TYRCKVCSRVYTHISNFCRHYVTSH----------------------------------- 34
Query: 705 IHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
N K + C C K F K N+ H
Sbjct: 35 -KRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Score = 42.9 bits (102), Expect = 1e-05
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 508 RCDTCSEVFDKLKDYQEHIKNVH-----PLPCPVCSKTFPSKPSLTLHMRTHLKI 557
RC CS V+ + ++ H H PCP C K F K ++T H++ KI
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 72
Score = 69.8 bits (172), Expect = 4e-15
Identities = 25/63 (39%), Positives = 30/63 (47%)
Query: 786 IRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHV 845
H +K Y C CGK F RS L H RVH GE+P+ C CGK + S H
Sbjct: 3 SGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQ 62
Query: 846 KTH 848
+ H
Sbjct: 63 RIH 65
Score = 69.8 bits (172), Expect = 4e-15
Identities = 21/67 (31%), Positives = 30/67 (44%)
Query: 760 HLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVRV 819
H +P+ C CG+ F R ++H R H +K Y C CGK F ++ L H R+
Sbjct: 5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI 64
Query: 820 HNGERPF 826
H
Sbjct: 65 HTSGPSS 71
Score = 65.2 bits (160), Expect = 1e-13
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 547 LTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQH 606
+ H KPY C C K+F + L H+ HTG P+ C C + F + S L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 607 KKVIH 611
++ IH
Sbjct: 62 QR-IH 65
Score = 55.9 bits (136), Expect = 3e-10
Identities = 21/58 (36%), Positives = 24/58 (41%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPF 588
P C C K F L H R H KPYKC C K+F L +H+ HT
Sbjct: 14 PYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71
Score = 52.5 bits (127), Expect = 5e-09
Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 8/69 (11%)
Query: 699 LKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKSCNRGFYSSS 755
IH KP+ C C K+F L HQ R+H P+KC C + F +S
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQ-----RVHTGEKPYKCLECGKAFSQNS 56
Query: 756 EYQAHLRSH 764
H R H
Sbjct: 57 GLINHQRIH 65
Score = 43.2 bits (103), Expect = 1e-05
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 813 LTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ +H+GE+P+ C CGK + S +H + H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVH 37
Score = 40.9 bits (97), Expect = 6e-05
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
C C K S L H R+H KP+ C C K+F L HQ H
Sbjct: 17 CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65
Score = 38.2 bits (90), Expect = 5e-04
Identities = 27/138 (19%), Positives = 36/138 (26%), Gaps = 68/138 (49%)
Query: 575 LSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKL 634
S H+G P+ C C + F R S L QH++V H GE K
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRV-------------HTGE------K- 41
Query: 635 LWHQETHATVPKQCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDENVNCDICKIVV 694
P +C C + F+ S L
Sbjct: 42 ----------PYKCLECGKAFSQNSGLIN------------------------------- 60
Query: 695 LKSTLKSHMRIHDNAKPF 712
H RIH +
Sbjct: 61 -------HQRIHTSGPSS 71
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA
binding, transcription, C2H2 type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 70
Score = 69.1 bits (170), Expect = 6e-15
Identities = 20/61 (32%), Positives = 27/61 (44%)
Query: 530 HPLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFP 589
HP C CS + SK +L +H R H +P+KC+ C LS H G+ P
Sbjct: 8 HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP 67
Query: 590 C 590
Sbjct: 68 S 68
Score = 67.1 bits (165), Expect = 3e-14
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 552 RTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
+ P KC C S + L H+ H + PF CN C K+ SNL++H K
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK-KF 60
Score = 66.0 bits (162), Expect = 8e-14
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 790 REHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTHH 849
C+ C + L H R+H +RPF C+ C + SN +KH+K H
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Score = 59.0 bits (144), Expect = 2e-11
Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Query: 762 RSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHN 821
S + P C+ C K H R H + + C C + L+ H++ +
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 822 GERPFSCHICG 832
G+ S G
Sbjct: 62 GDM--SGPSSG 70
Score = 51.0 bits (123), Expect = 2e-08
Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
C C K+ L+ H RIH +PF C C NL H
Sbjct: 12 CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 49.8 bits (120), Expect = 4e-08
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREH 792
P KC C+ S + + H R H RPF CNYC + N +H+++
Sbjct: 9 PEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 47.1 bits (113), Expect = 3e-07
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 8/64 (12%)
Query: 704 RIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKSCNRGFYSSSEYQAH 760
+ P C+ C S +K L +H+ R+H PFKC C+ S H
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHE-----RIHCTDRPFKCNYCSFDTKQPSNLSKH 56
Query: 761 LRSH 764
++
Sbjct: 57 MKKF 60
Score = 44.8 bits (107), Expect = 2e-06
Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 30/87 (34%)
Query: 581 THTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQET 640
+ + P C+ C + L H+++ HC + +
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERI-------------HCTD------R------- 36
Query: 641 HATVPKQCTYCTEKFTHTSSLTRHIRK 667
P +C YC+ S+L++H++K
Sbjct: 37 ----PFKCNYCSFDTKQPSNLSKHMKK 59
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces
cerevisiae} SCOP: g.37.1.1 g.37.1.1
Length = 60
Score = 66.4 bits (163), Expect = 4e-14
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 796 KKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTHHARET 853
+ + C +C + F R +L H R H E+P+ C +C + T + +H + H+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 66.4 bits (163), Expect = 5e-14
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 558 KPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
+ + C+VC ++F + L H +HT P+PC +C+R F R L +H + IH
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 63.3 bits (155), Expect = 7e-13
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 768 RPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHV-RVHNGE 823
R F C C R F R+ + RH R H +K Y C +C + F R L H ++H+G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 54.4 bits (132), Expect = 8e-10
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDH-KNTHTGN 585
C VC++ F + L H R+H KPY C +C+++F L H + H+GN
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 52.1 bits (126), Expect = 5e-09
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVR 790
F C+ C R F + H RSH N +P+ C C R F R+ IRH +
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ 51
Score = 41.3 bits (98), Expect = 3e-05
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLH-QWTH 734
C++C + + LK H R H N KP+ C +C ++F + L H Q H
Sbjct: 5 CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 40.9 bits (97), Expect = 5e-05
Identities = 20/83 (24%), Positives = 26/83 (31%), Gaps = 30/83 (36%)
Query: 587 PFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQETHATVPK 646
F C +C R F R +L +H + H +K P
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYR-SHTNEK-----------------------------PY 31
Query: 647 QCTYCTEKFTHTSSLTRHIRKNH 669
C C FT L RH +K H
Sbjct: 32 PCGLCNRAFTRRDLLIRHAQKIH 54
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible
early growth response protein 1, TGFB-inducible early
growth response protein 1; NMR {Homo sapiens}
Length = 72
Score = 64.7 bits (158), Expect = 2e-13
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 787 RHVREHELKKKYSCTI--CGKTFHRSYYLTAHVRVHNGERPFSCHI--CGKTSTTKSNHN 842
+ + + C+ CGKT+ +S +L AH R H GE+PFSC C + +
Sbjct: 7 GPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELS 66
Query: 843 KHVKTH 848
+H +TH
Sbjct: 67 RHRRTH 72
Score = 57.0 bits (138), Expect = 1e-10
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 544 KPSLTLHMRTHLKIKPYKCDV--CDKSFVTAQKLSDHKNTHTGNAPFPCNM--CDRHFKR 599
+ +I+ + C C K++ + L H THTG PF C+ C+R F R
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 600 YSNLAQHKKV 609
L++H++
Sbjct: 62 SDELSRHRRT 71
Score = 55.9 bits (135), Expect = 4e-10
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 754 SSEYQAHLRSHRNIRPFTCNY--CGRKFIRKFNCIRHVREHELKKKYSCTI--CGKTFHR 809
SS IR C++ CG+ + + + H R H +K +SC+ C + F R
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 810 SYYLTAHVRVH 820
S L+ H R H
Sbjct: 62 SDELSRHRRTH 72
Score = 49.3 bits (118), Expect = 6e-08
Identities = 20/99 (20%), Positives = 32/99 (32%), Gaps = 30/99 (30%)
Query: 696 KSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSS 755
S + C+ C + ++ SS
Sbjct: 2 SSGSSGPQIDSSRIRSHICSH----------------------------PGCGKTYFKSS 33
Query: 756 EYQAHLRSHRNIRPFTCNY--CGRKFIRKFNCIRHVREH 792
+AH R+H +PF+C++ C R+F R RH R H
Sbjct: 34 HLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 45.5 bits (108), Expect = 2e-06
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 530 HPLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDV--CDKSFVTAQKLSDHKNTH 582
H P C KT+ L H RTH KP+ C C++ F + +LS H+ TH
Sbjct: 18 HICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 34.7 bits (80), Expect = 0.009
Identities = 10/38 (26%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 813 LTAHVRVHNGERPFSCHI--CGKTSTTKSNHNKHVKTH 848
+ + R C CGKT S+ H +TH
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTH 42
Score = 33.1 bits (76), Expect = 0.032
Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 6/68 (8%)
Query: 606 HKKVIHLKKKKIKDFYCH---CGEIFQSRGKLLWHQETHA-TVPKQCTY--CTEKFTHTS 659
+ +I+ C CG+ + L H TH P C++ C +F +
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63
Query: 660 SLTRHIRK 667
L+RH R
Sbjct: 64 ELSRHRRT 71
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc
finger, dimer, protein-DNA complex, cooperativity,
transcription/DNA complex; 2.35A {Mus musculus} SCOP:
g.37.1.1 g.37.1.1
Length = 73
Score = 64.6 bits (158), Expect = 3e-13
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 542 PSKPS-LTLHMRTHLKIKPYKCDV--CDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFK 598
P + L ++ ++PY C V CD+ F + +L+ H HTG PF C +C R+F
Sbjct: 3 PHPMNNLLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 599 RYSNLAQHKK 608
R +L H +
Sbjct: 61 RSDHLTTHIR 70
Score = 62.7 bits (153), Expect = 2e-12
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 753 SSSEYQAHLRSHRNIRPFTCNY--CGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRS 810
+ ++ RP+ C C R+F R RH+R H +K + C IC + F RS
Sbjct: 5 PMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRS 62
Query: 811 YYLTAHVRVH 820
+LT H+R H
Sbjct: 63 DHLTTHIRTH 72
Score = 61.9 bits (151), Expect = 2e-12
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 787 RHVREHELKKKYSCTI--CGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKH 844
+V + Y+C + C + F RS LT H+R+H G++PF C IC + + + H
Sbjct: 11 NYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH 68
Query: 845 VKTH 848
++TH
Sbjct: 69 IRTH 72
Score = 55.8 bits (135), Expect = 4e-10
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 531 PLPCPV--CSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHT 583
P CPV C + F LT H+R H KP++C +C ++F + L+ H THT
Sbjct: 19 PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73
Score = 53.1 bits (128), Expect = 4e-09
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 726 NLGLHQWTHVSRMHMPFKC--KSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGRKFIRKF 783
NL + P+ C +SC+R F S E H+R H +PF C C R F R
Sbjct: 8 NLLNYVVPK----MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSD 63
Query: 784 NCIRHVREH 792
+ H+R H
Sbjct: 64 HLTTHIRTH 72
Score = 43.1 bits (102), Expect = 1e-05
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 699 LKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
L H+RIH KPF C +C ++F +L H TH
Sbjct: 37 LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 32.3 bits (74), Expect = 0.065
Identities = 21/95 (22%), Positives = 32/95 (33%), Gaps = 34/95 (35%)
Query: 576 SDHKNTH--TGNAPFPCNM--CDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSR 631
++ + P+ C + CDR F R L +H ++ H G+
Sbjct: 6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRI-------------HTGQ----- 47
Query: 632 GKLLWHQETHATVPKQCTYCTEKFTHTSSLTRHIR 666
P QC C F+ + LT HIR
Sbjct: 48 ------------KPFQCRICMRNFSRSDHLTTHIR 70
Score = 28.0 bits (63), Expect = 2.6
Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Query: 807 FHRSYYLTAHVRVHNGERPFSCHI--CGKTSTTKSNHNKHVKTH 848
H L +V RP++C + C + + +H++ H
Sbjct: 3 PHPMNNLLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIH 44
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 95
Score = 62.7 bits (152), Expect = 3e-12
Identities = 22/99 (22%), Positives = 33/99 (33%), Gaps = 23/99 (23%)
Query: 731 QWTHVSRMHMPFKCKSCNRGFYSSSEYQAHL-RSHRNIRPFTCNYCGRKFIRKFNCIRHV 789
+W + + KSC+R F + E H+ H + C +
Sbjct: 17 KWIDEA--QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE----------- 63
Query: 790 REHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
C GK+F Y L H+RVH GE+
Sbjct: 64 ---------ECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 53.8 bits (129), Expect = 3e-09
Identities = 19/70 (27%), Positives = 24/70 (34%), Gaps = 9/70 (12%)
Query: 530 HPLPCPVCSKTFPSKPSLTLHM-RTHLKIKPYKCDVC--------DKSFVTAQKLSDHKN 580
P C +TF + L H+ H+ VC KSF KL +H
Sbjct: 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83
Query: 581 THTGNAPFPC 590
HTG P
Sbjct: 84 VHTGEKSGPS 93
Score = 52.7 bits (126), Expect = 8e-09
Identities = 15/70 (21%), Positives = 22/70 (31%), Gaps = 12/70 (17%)
Query: 505 KQRRCDTCSEVFDKLKDYQEHIKNVHPLP------------CPVCSKTFPSKPSLTLHMR 552
R +C F + + H+ H CP K+F +K L H+R
Sbjct: 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83
Query: 553 THLKIKPYKC 562
H K
Sbjct: 84 VHTGEKSGPS 93
Score = 49.2 bits (117), Expect = 1e-07
Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 6/67 (8%)
Query: 581 THTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCH------CGEIFQSRGKL 634
P CDR F L H + H+ + + C+ G+ F+++ KL
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 635 LWHQETH 641
+ H H
Sbjct: 79 VNHIRVH 85
Score = 47.3 bits (112), Expect = 6e-07
Identities = 15/76 (19%), Positives = 25/76 (32%), Gaps = 11/76 (14%)
Query: 645 PKQCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDENV----NCDIC-KIVVLKSTL 699
+ C F+ L H+ H V + + +V C K K L
Sbjct: 25 SRPKKSCDRTFSTMHELVTHVTMEH------VGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 700 KSHMRIHDNAKPFSCT 715
+H+R+H K +
Sbjct: 79 VNHIRVHTGEKSGPSS 94
Score = 45.0 bits (106), Expect = 5e-06
Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 9/66 (13%)
Query: 792 HELKKKYSCTICGKTFHRSYYLTAHV-RVHNGERPFSCHIC--------GKTSTTKSNHN 842
E + C +TF + L HV H G + H+C GK+ K
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 843 KHVKTH 848
H++ H
Sbjct: 80 NHIRVH 85
Score = 37.3 bits (86), Expect = 0.002
Identities = 13/63 (20%), Positives = 17/63 (26%), Gaps = 9/63 (14%)
Query: 553 THLKIKPYKCDVCDKSFVTAQKLSDH-KNTHTGNAPFP--------CNMCDRHFKRYSNL 603
CD++F T +L H H G C + FK L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 604 AQH 606
H
Sbjct: 79 VNH 81
Score = 29.6 bits (66), Expect = 1.1
Identities = 6/31 (19%), Positives = 10/31 (32%)
Query: 819 VHNGERPFSCHICGKTSTTKSNHNKHVKTHH 849
+ + C +T +T HV H
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEH 49
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 115
Score = 62.5 bits (151), Expect = 5e-12
Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 3/99 (3%)
Query: 697 STLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSE 756
S+ K + I A F C C ++ T L +H + + N +S
Sbjct: 5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64
Query: 757 YQAHLRSHRNI---RPFTCNYCGRKFIRKFNCIRHVREH 792
++ L + C YCG F + H+ +
Sbjct: 65 KRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKT 103
Score = 59.4 bits (143), Expect = 7e-11
Identities = 16/108 (14%), Positives = 34/108 (31%), Gaps = 6/108 (5%)
Query: 753 SSSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVRE-----HELKKKYSCTICGKTF 807
S S + + F C C + H+ E + + + +
Sbjct: 3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62
Query: 808 HRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKH-VKTHHARETI 854
R L + ++ C CG + + + + H +KT H ++
Sbjct: 63 PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVS 110
Score = 59.0 bits (142), Expect = 9e-11
Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 6/96 (6%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRT--HLKIKPYKCDVC---DKSFVTAQKLSDHKNTHTGN 585
C CS + + LT+HM H + ++ D S + L + +
Sbjct: 19 KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQ 78
Query: 586 APFPCNMCDRHFKRYSNLAQH-KKVIHLKKKKIKDF 620
C C F+ +L+ H K H +K
Sbjct: 79 KVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPSS 114
Score = 54.4 bits (130), Expect = 3e-09
Identities = 25/92 (27%), Positives = 30/92 (32%), Gaps = 10/92 (10%)
Query: 508 RCDTCSEVFDKLKDYQEHIK--------NVHPLPCPVCSKTFPSKPSLTLHMRTHLKIKP 559
RC CS +D L + H+ N + P K SL K
Sbjct: 21 RCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV 80
Query: 560 YKCDVCDKSFVTAQKLSDH--KNTHTGNAPFP 589
KC C SF + Q LS H K H P
Sbjct: 81 LKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112
Score = 50.9 bits (121), Expect = 7e-08
Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 25/124 (20%)
Query: 546 SLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQ 605
S L+ ++C C ++ T +L+ H N TG+ + D + + + +
Sbjct: 6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRWSKPR 64
Query: 606 HKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQETHATVPKQCTYCTEKFTHTSSLTRHI 665
+ ++ + + A +C YC F L+ H+
Sbjct: 65 KRSLLEM------------------------EGKEDAQKVLKCMYCGHSFESLQDLSVHM 100
Query: 666 RKNH 669
K
Sbjct: 101 IKTK 104
Score = 45.5 bits (107), Expect = 4e-06
Identities = 16/86 (18%), Positives = 27/86 (31%), Gaps = 5/86 (5%)
Query: 645 PKQCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDENVNCDICKIVVLKSTLKSHMR 704
+C C+ + LT H+ + R + + K +L
Sbjct: 19 KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK-----RSLLEMEG 73
Query: 705 IHDNAKPFSCTVCKKSFYTKWNLGLH 730
D K C C SF + +L +H
Sbjct: 74 KEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 40.9 bits (95), Expect = 2e-04
Identities = 9/51 (17%), Positives = 14/51 (27%), Gaps = 1/51 (1%)
Query: 809 RSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVK-THHARETINTEG 858
+ + G F C C T H+ T H R+ +
Sbjct: 3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETD 53
Score = 34.4 bits (78), Expect = 0.040
Identities = 10/67 (14%), Positives = 17/67 (25%), Gaps = 2/67 (2%)
Query: 497 PSLTSIKNKQRRCDTCSEVFDKLKDYQEHIKNVHPLPCPVCSKTFPSKPSLTLHM--RTH 554
+ L + + L C C +F S L++HM H
Sbjct: 46 RDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKH 105
Query: 555 LKIKPYK 561
+
Sbjct: 106 YQKVSGP 112
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 54
Score = 59.5 bits (145), Expect = 9e-12
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHV-RVHNGERPFSCHICGKTSTT 837
+ K Y C CGK F R +L H+ +VH ERP C + ++
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 50.7 bits (122), Expect = 1e-08
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDH-KNTHTGNAPFPCNMCDRHF 597
+ KPY C C K F L+ H K HT P C +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 45.3 bits (108), Expect = 1e-06
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 531 PLPCPVCSKTFPSKPSLTLHM-RTHLKIKPYKCDVCDKSFVTA 572
P C C K F L H+ + H +P+KC V +
Sbjct: 12 PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG 54
Score = 41.8 bits (99), Expect = 2e-05
Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRS-HRNIRPFTCNYCGRKF 779
P+ C+SC +GF H++ H + RP C
Sbjct: 12 PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 41.8 bits (99), Expect = 2e-05
Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 7/54 (12%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKSCNRGF 751
S KP+ C C K F +L H+ ++H P KC+ G
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHL----NGHIKQVHTSERPHKCQVWVSGP 51
Score = 39.5 bits (93), Expect = 1e-04
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ + P+ C C + F R +L H K +H
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 36
Score = 34.9 bits (81), Expect = 0.006
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTHH 849
+ + +P+ C CGK + + N H+K H
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 36
Score = 30.2 bits (69), Expect = 0.23
Identities = 11/77 (14%), Positives = 18/77 (23%), Gaps = 37/77 (48%)
Query: 645 PKQCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDENVNCDICKIVVLKSTLKSHMR 704
P C C + F+ L HI+ +
Sbjct: 12 PYICQSCGKGFSRPDHLNGHIK-------------------------------------Q 34
Query: 705 IHDNAKPFSCTVCKKSF 721
+H + +P C V
Sbjct: 35 VHTSERPHKCQVWVSGP 51
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET:
ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB:
3znf_A 4znf_A
Length = 57
Score = 56.6 bits (136), Expect = 1e-10
Identities = 19/52 (36%), Positives = 25/52 (48%)
Query: 797 KYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
KY C CG + L H+R H RP+ C C + TK N KH+K+
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 52.0 bits (124), Expect = 5e-09
Identities = 16/51 (31%), Positives = 22/51 (43%)
Query: 534 CPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTG 584
C C L H+RTH ++PY C C+ SF T L+ H +
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 49.3 bits (117), Expect = 5e-08
Identities = 19/56 (33%), Positives = 23/56 (41%)
Query: 560 YKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKK 615
Y C+ C L H THT P+ C C+ FK NL +H K KK
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57
Score = 48.6 bits (115), Expect = 8e-08
Identities = 14/55 (25%), Positives = 24/55 (43%)
Query: 770 FTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGER 824
+ C CG + + +H+R H + Y CT C +F LT H++ +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 45.9 bits (108), Expect = 9e-07
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 742 FKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKK 797
+ C+ C S + H+R+H ++RP+ C YC F K N +H++ KK
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57
Score = 40.9 bits (95), Expect = 4e-05
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
C+ C S LK H+R H + +P+ CT C SF TK NL H +
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 35.8 bits (82), Expect = 0.002
Identities = 13/51 (25%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Query: 714 CTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSH 764
C C L H TH P+ C CN F + H++S
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVR--PYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 30.1 bits (67), Expect = 0.33
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 508 RCDTCSEVFDKLKDYQEHIK---NVHPLPCPVCSKTFPSKPSLTLHMRTH 554
C+ C K ++HI+ +V P C C+ +F +K +LT HM++
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 63.7 bits (154), Expect = 2e-10
Identities = 95/595 (15%), Positives = 162/595 (27%), Gaps = 223/595 (37%)
Query: 74 PDVGVLLSEIKTEPGVVSKPITVNKVPKVEDTIPTSTSNFLDYNAAQRGKQRKTVKILKI 133
+ L+S IKTE S +T + + D + F YN R + LK+
Sbjct: 89 INYKFLMSPIKTEQRQPS-MMTRMYIEQR-DRLYNDNQVFAKYN-VSRLQ-----PYLKL 140
Query: 134 KNAKTREQP------DGAQMNTSSSSQQAQSSVIQHPVKTEPPPPYDTKHGILYCQPGSS 187
+ A +P DG + S + A + + V+ + I + +
Sbjct: 141 RQALLELRPAKNVLIDG--VLGSGKTWVALDVCLSYKVQCKMD------FKIFWLNLKNC 192
Query: 188 KTSATNPEPPKNSAGNFLGIDLPSVSNLPQLDRPPTVDITPSKYLPTNLNSPSLESPIQD 247
+ T E + L L Q+D T S + ++S
Sbjct: 193 NSPETVLEMLQK-----L---------LYQIDPNWTSRSDHSSNIKLRIHS--------- 229
Query: 248 YNFLVANTKLDRLSNLHNGEYDSVDTPHWLLRGINIL-----PQVIEDDRISCASPKTLL 302
+L RL L + Y + LL +L + +SC K LL
Sbjct: 230 -----IQAELRRL--LKSKPY-----ENCLL----VLLNVQNAKAWNAFNLSC---KILL 270
Query: 303 -------------------NLDH-QTSFEPDDSG---STSINMQTDEMMPPRGELSGQES 339
+LDH + PD+ ++ + ++ PR L+
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL--PREVLTTNPR 328
Query: 340 LESSVWGYQEDNGAPQYHRQWDEMDHEVMDNISNSNSFRTKIEKIEPINS---------L 390
S + D A WD H D + + + + +EP
Sbjct: 329 RLSIIAESIRDGLA-----TWDNWKHVNCDKL--TTIIESSLNVLEPAEYRKMFDRLSVF 381
Query: 391 PDNIKMEESVSILPII------------------SSLDIAKKKK---------------- 416
P + + + L +I SL + K+ K
Sbjct: 382 PPSAHIPTIL--LSLIWFDVIKSDVMVVVNKLHKYSL-VEKQPKESTISIPSIYLELKVK 438
Query: 417 -------HACI---Y-CKKTFTGWKLRK------------YHMK-AEHPELFNEPETIKL 452
H I Y KTF L +H+K EHPE + L
Sbjct: 439 LENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL 498
Query: 453 LSKTQASTSTVISEPSTSFVSQAVCPIKFENSNSFGTQIQEFLPPSLTSIKNKQRRCDTC 512
F+ Q K I++ +
Sbjct: 499 ---------------DFRFLEQ-----K---------------------IRHDSTAWNAS 517
Query: 513 SEVFDKLKD---YQEHIKNVHPLPCPVCS--KTFPSKPSLTLHMRTHLKIKPYKC 562
+ + L+ Y+ +I + P + + F K +L Y
Sbjct: 518 GSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIE------ENLICSKYTD 566
Score = 44.1 bits (103), Expect = 2e-04
Identities = 48/393 (12%), Positives = 98/393 (24%), Gaps = 105/393 (26%)
Query: 491 IQEFLPPSLTS-----IKNKQRRCDTCSEVFDKLKDYQEHIKNVHPLPCPVCSKTFPSKP 545
+Q+ L+ I + +F L QE + + F
Sbjct: 38 VQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEM-----------VQKF---- 82
Query: 546 SLTLHMRTHLKI------KPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKR 599
+ L+I P K + S +T + + N F + R
Sbjct: 83 -----VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA----KYNVSR 133
Query: 600 Y----------SNLAQHKKV-IH--------------LKKKKIKD------FYCHCGEIF 628
L K V I K++ F+ +
Sbjct: 134 LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN 193
Query: 629 QSRGKL-----LWHQETHATVPKQCTYCTEKFTHTS---SLTRHIRKNHDPRYLPV-DRK 679
L L +Q + K S L R ++ L V
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV 253
Query: 680 KTDENVNC-DI-CKIVV----------LKSTLKSHMRIHDNAKPFSCTVCKKSFYTKW-N 726
+ + N ++ CKI++ L + +H+ + ++ + KS K+ +
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE-VKSLLLKYLD 312
Query: 727 LGLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGRKFIRKF-NC 785
P + +R + K +
Sbjct: 313 CRPQDLPREVLTTNPRRLSIIA----------ESIRDGLATWDNWKHVNCDKLTTIIESS 362
Query: 786 IRHVREHELKKKY-SCTICGKTFHRSYYLTAHV 817
+ + E +K + ++ F S ++ +
Sbjct: 363 LNVLEPAEYRKMFDRLSV----FPPSAHIPTIL 391
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Length = 129
Score = 58.4 bits (140), Expect = 2e-10
Identities = 28/129 (21%), Positives = 42/129 (32%), Gaps = 9/129 (6%)
Query: 695 LKSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSS 754
+ S K ++ H K V + L Q + + K N
Sbjct: 6 VDSGSKKYLSNH---KGIFIHVTLEELKRYHQLTPEQKRLIRAI---VKTLIHNPQLLDE 59
Query: 755 SEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLT 814
S Y L + + I F C C F + +H+R E C +C K F +
Sbjct: 60 SSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSAL 117
Query: 815 AHV-RVHNG 822
HV + HN
Sbjct: 118 DHVCKKHNI 126
Score = 50.3 bits (119), Expect = 1e-07
Identities = 17/115 (14%), Positives = 34/115 (29%), Gaps = 3/115 (2%)
Query: 737 RMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKK 796
H + + T + + + + + + + +
Sbjct: 15 SNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNP-QLLDESSYLYRLLASKAIS 73
Query: 797 KYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTHHAR 851
++ C +C F S L H+R E C +C K T+ + HV H
Sbjct: 74 QFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI 126
Score = 46.5 bits (109), Expect = 3e-06
Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 526 IKNVHPLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDH-KNTHTG 584
K + CP+C F S SL H+R C VC K F + DH H
Sbjct: 69 SKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSALDHVCKKHNI 126
Score = 44.2 bits (103), Expect = 2e-05
Identities = 12/77 (15%), Positives = 23/77 (29%), Gaps = 2/77 (2%)
Query: 535 PVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCD 594
+ + + S + I + C +C F ++ L H C +C
Sbjct: 50 LIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEH--TKVCPVCK 107
Query: 595 RHFKRYSNLAQHKKVIH 611
+ F + H H
Sbjct: 108 KEFTSTDSALDHVCKKH 124
Score = 43.0 bits (100), Expect = 5e-05
Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 3/93 (3%)
Query: 588 FPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQETHATVPKQ 647
++ KRY L +K + + I H ++ L + A
Sbjct: 20 IFIHVTLEELKRYHQLTPEQKRLI---RAIVKTLIHNPQLLDESSYLYRLLASKAISQFV 76
Query: 648 CTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKK 680
C C F+ + SL +HIR + PV +K+
Sbjct: 77 CPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKE 109
Score = 40.7 bits (94), Expect = 3e-04
Identities = 22/147 (14%), Positives = 40/147 (27%), Gaps = 33/147 (22%)
Query: 523 QEHIKNVHPLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTH 582
++++ N + V + LT + ++ + + +
Sbjct: 11 KKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTL-IHNPQLLDESSYLYRLLAS 69
Query: 583 TGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLLWHQETHA 642
+ F C +C F +L QH H
Sbjct: 70 KAISQFVCPLCLMPFSSSVSLKQHI-----------------------------RYTEH- 99
Query: 643 TVPKQCTYCTEKFTHTSSLTRHIRKNH 669
K C C ++FT T S H+ K H
Sbjct: 100 --TKVCPVCKKEFTSTDSALDHVCKKH 124
Score = 29.9 bits (66), Expect = 1.7
Identities = 10/94 (10%), Positives = 27/94 (28%), Gaps = 4/94 (4%)
Query: 760 HLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVRV 819
+L +H+ + + R + + + S YL +
Sbjct: 13 YLSNHKG---IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLAS 69
Query: 820 HNGERPFSCHICGKTSTTKSNHNKHVKTHHARET 853
F C +C ++ + +H++ +
Sbjct: 70 KAI-SQFVCPLCLMPFSSSVSLKQHIRYTEHTKV 102
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 62.4 bits (151), Expect = 7e-10
Identities = 105/716 (14%), Positives = 198/716 (27%), Gaps = 313/716 (43%)
Query: 91 SKPITVNKVPKVEDTIPTSTSNFLDYNAAQRGKQRKTVKILKIKNAKTREQPDGAQMNTS 150
++P+T++ +E + T++F + A+Q L+ + K +P
Sbjct: 6 TRPLTLSH-GSLEHVLLVPTASF--FIASQ----------LQEQFNKILPEPT-----EG 47
Query: 151 SSSQQAQSSV----------IQHPVKTEPPPPYDTKHGILYCQPGSSKTSATNPEPPKNS 200
++ ++ + V+ +D +L T E
Sbjct: 48 FAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQ---VL-------NLCLTEFE----- 92
Query: 201 AGNFL-GIDLPS-VSNLPQLDRPPTV---DITPSKYL-------PTNLNSPS--LESPIQ 246
+L G D+ + + L Q + V ++ + P + S S + +
Sbjct: 93 -NCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGE 151
Query: 247 DYNFLVA------NTK--LDRLSNLHNGEYDSVDTPHWLLRGINILPQVIEDDRISCASP 298
LVA NT + L +L+ T H L+ D I ++
Sbjct: 152 GNAQLVAIFGGQGNTDDYFEELRDLY-------QTYHVLVG-----------DLIKFSA- 192
Query: 299 KTLLNLDHQTSFEPDDSGSTSINMQTDEMMPPRGELSGQESLESSVWGYQEDNGAPQYHR 358
+TL L D+ E + +G L W + + P
Sbjct: 193 ETLSEL----IRTTLDA----------EKVFTQG-------LNILEWL-ENPSNTP---- 226
Query: 359 QWDEMDHEVMDNISNSNSFRTKIEKIEPINSLPDNIKMEESVSILPIISSLDIAKKKKHA 418
D + + S+P +S P+I + +A H
Sbjct: 227 -----DKDYLL-------------------SIP--------IS-CPLIGVIQLA----HY 249
Query: 419 CIYCKKTFTGWKLRKYHMKAEHPELFNEPETIKLLSKTQAST--------STVISEPST- 469
+ K G+ P +L S + +T + I+E +
Sbjct: 250 VVTAKL--LGF----------TPG--------ELRSYLKGATGHSQGLVTAVAIAETDSW 289
Query: 470 -SFVSQAVCPIKFENSNSF--GTQIQE-----FLPPSLTSIKNKQRRCDTCSEVFDKLKD 521
SF I F G + E LPPS+
Sbjct: 290 ESFFVSVRKAITV----LFFIGVRCYEAYPNTSLPPSIL--------------------- 324
Query: 522 YQEHIKNVHPLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNT 581
++ ++N +P P M L I + + Q + N+
Sbjct: 325 -EDSLENNEGVPSP---------------M---LSIS-------NLTQEQVQDYVNKTNS 358
Query: 582 HTG----------NAP-------FP---CNMCD--RHFKRYSNLAQHKKVIHLKKKKIKD 619
H N P + R K S L Q + I ++K+K
Sbjct: 359 HLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSR--IPFSERKLK- 415
Query: 620 FYCHCGEIFQSRGKLLWHQETHATVPKQCTYCTEKFTHTSSLT-------RHIRKNH--- 669
F +R L P F H+ L + + KN+
Sbjct: 416 --------FSNR--FL-----PVASP---------F-HSHLLVPASDLINKDLVKNNVSF 450
Query: 670 DPRYL--PV-------DRKKTDENVNCDICKIVVLKSTLKSHMRIH-DNAKPFSCT 715
+ + + PV D + +++ I ++ + + + F T
Sbjct: 451 NAKDIQIPVYDTFDGSDLRVLSGSISERIVDCII-------RLPVKWETTTQFKAT 499
Score = 40.4 bits (94), Expect = 0.003
Identities = 72/424 (16%), Positives = 134/424 (31%), Gaps = 128/424 (30%)
Query: 12 GNI-SY--EIQEVMYEM-KAFGNVKLSVHKLHIPTIKNETSEECSKMQSSTNIY----DY 63
GN Y E+++ +Y+ V L I SE + ++ +
Sbjct: 164 GNTDDYFEELRD-LYQTYHVL------VGDL-IKFSAETLSELIRTTLDAEKVFTQGLNI 215
Query: 64 KTPMPSTSSTPDVGVLLSEIKTEPGVVSKP-ITVNK------VPKVEDTIPTSTSNFLDY 116
+ + S+TPD LLS P +S P I V + K+ P Y
Sbjct: 216 LEWLENPSNTPDKDYLLS----IP--ISCPLIGVIQLAHYVVTAKLLGFTP---GELRSY 266
Query: 117 NAAQRGKQRKTVKILKIKNAKTREQPDGAQMNTSSS----------SQQAQSSVIQHPVK 166
G + V + I + E ++ + +A +P
Sbjct: 267 LKGATGHSQGLVTAVAIAETDSWES---FFVSVRKAITVLFFIGVRCYEA------YPNT 317
Query: 167 TEPPPPYD--TKHG------ILYCQPGSSKT------SATNPEPP---------KNSAGN 203
+ PP + ++ +L ++ + TN P N A N
Sbjct: 318 SLPPSILEDSLENNEGVPSPMLSIS-NLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKN 376
Query: 204 F-----------LGIDLPSVSNLPQLD--------RPPTVDITPSKYLP------TNLNS 238
L + L LD R +++LP ++L
Sbjct: 377 LVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFS---NRFLPVASPFHSHLLV 433
Query: 239 PSLESPIQDYNFLVANTKLDRLSNLHNGEYDSVDTPHWLLRGI--NILPQVIEDDRISCA 296
P+ + +D LV N ++ YD+ D LR + +I +++ D I
Sbjct: 434 PASDLINKD---LVKNNVSFNAKDIQIPVYDTFDGSD--LRVLSGSISERIV--DCI-IR 485
Query: 297 SP---KTLLNLD--HQTSFEPDDSGSTSINMQTDEMMPPRGE---LSGQESLESSV---W 345
P +T H F P G++ + + T G ++G +L+ + +
Sbjct: 486 LPVKWETTTQFKATHILDFGP--GGASGLGVLTHRNKDGTGVRVIVAG--TLDINPDDDY 541
Query: 346 GYQE 349
G+++
Sbjct: 542 GFKQ 545
Score = 36.2 bits (83), Expect = 0.052
Identities = 11/75 (14%), Positives = 24/75 (32%), Gaps = 21/75 (28%)
Query: 87 PGVVSKPITVNKVPKVEDTIPTSTSNFLD---YNAAQRGKQ----------------RKT 127
PG V+ + + V + + T ++ YN +Q
Sbjct: 1814 PGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVE--NQQYVAAGDLRALDTVTNVLNF 1871
Query: 128 VKILKIKNAKTREQP 142
+K+ KI + ++
Sbjct: 1872 IKLQKIDIIELQKSL 1886
Score = 31.6 bits (71), Expect = 1.6
Identities = 31/173 (17%), Positives = 54/173 (31%), Gaps = 71/173 (41%)
Query: 266 GEY-------------DSVDTPHWLLRGINILPQVIEDDRISCASPKTLLNLDHQTSFEP 312
GEY V+ RG T+ Q +
Sbjct: 1765 GEYAALASLADVMSIESLVEVVF--YRG------------------MTM-----QVAVPR 1799
Query: 313 DDSGSTSINMQTDEMMPPRGELSG-QESLESSVWGYQEDNG---------AP--QY---- 356
D+ G ++ M + P R S QE+L+ V + G QY
Sbjct: 1800 DELGRSNYGMIA--INPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQYVAAG 1857
Query: 357 HRQWDEMDHEVMDNISNSNSFRTKIEKIEPINSLPDNIKMEESVSILPIISSL 409
+ + + N+ N K++KI D I++++S+S+ + L
Sbjct: 1858 DLR----ALDTVTNVLNFI----KLQKI-------DIIELQKSLSLEEVEGHL 1895
Score = 31.2 bits (70), Expect = 1.8
Identities = 28/155 (18%), Positives = 43/155 (27%), Gaps = 62/155 (40%)
Query: 316 GSTSINMQTDEMMPPRGELSGQESLESSVWGYQEDNGAPQYHRQ-WDEMDHEVMDNISNS 374
GS M G + L Y+ A + W+ D+ D S
Sbjct: 1625 GSQEQGM-------------GMD-L------YKTSKAA----QDVWNRADNHFKDTYGFS 1660
Query: 375 NSFRTKIEKIEPINSLPDNI----------KMEESVSILPIISSLDIAKKKKHACIYCKK 424
I I N P N+ ++ E+ S + + +D + +K
Sbjct: 1661 ------ILDIVINN--PVNLTIHFGGEKGKRIRENYSAMIFETIVD-------GKLKTEK 1705
Query: 425 TFTGW--KLRKYHMKAEHPELFNEPETIKLLSKTQ 457
F Y F + LLS TQ
Sbjct: 1706 IFKEINEHSTSY--------TFRSEK--GLLSATQ 1730
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 48
Score = 54.2 bits (130), Expect = 7e-10
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 790 REHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHIC 831
+K+ +C ICGK F Y+L H H+GE+P+S
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 46.1 bits (109), Expect = 5e-07
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 552 RTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMC 593
+ K C++C K F L+ HK +H+G P+
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 40.3 bits (94), Expect = 7e-05
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 762 RSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTIC 803
S R + C CG+ F ++ RH H +K YS
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 36.8 bits (85), Expect = 0.001
Identities = 10/35 (28%), Positives = 13/35 (37%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVC 565
+ C +C K F L H +H KPY
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 34.5 bits (79), Expect = 0.006
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 678 RKKTDENVNCDIC-KIVVLKSTLKSHMRIHDNAKPFSCTVC 717
+T + V C+IC KI L H H KP+S
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 33.8 bits (77), Expect = 0.011
Identities = 7/35 (20%), Positives = 12/35 (34%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYC 775
C+ C + F H SH +P++
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 31.8 bits (72), Expect = 0.060
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 818 RVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ +C ICGK + N+H +H
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSH 35
Score = 30.7 bits (69), Expect = 0.14
Identities = 9/45 (20%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Query: 704 RIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCN 748
K +C +C K F ++L H+ +H P+ +
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSG--EKPYSSGPSS 47
Score = 27.6 bits (61), Expect = 2.3
Identities = 6/29 (20%), Positives = 12/29 (41%)
Query: 581 THTGNAPFPCNMCDRHFKRYSNLAQHKKV 609
+ C +C + F+ +L +HK
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRHKLS 34
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 73
Score = 53.5 bits (128), Expect = 2e-09
Identities = 17/74 (22%), Positives = 24/74 (32%), Gaps = 7/74 (9%)
Query: 753 SSSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYY 812
SS + H R C+ CG FIR+ R K C C K +
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAA 54
Query: 813 LTAHVRVHNGERPF 826
L +G++
Sbjct: 55 LNKDEGNESGKKTS 68
Score = 45.8 bits (108), Expect = 1e-06
Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 7/67 (10%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVK 846
+ + H + C+ CG F R L+ + C C K S ++ NK
Sbjct: 8 KRQKIHLGDRSQKCSKCGIIFIRRSTLS-------RRKTPMCEKCRKDSCQEAALNKDEG 60
Query: 847 THHARET 853
++T
Sbjct: 61 NESGKKT 67
Score = 44.7 bits (105), Expect = 3e-06
Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 7/67 (10%)
Query: 543 SKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSN 602
S S + HL + KC C F+ ++T + C C + + +
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFI-------RRSTLSRRKTPMCEKCRKDSCQEAA 54
Query: 603 LAQHKKV 609
L + +
Sbjct: 55 LNKDEGN 61
Score = 40.0 bits (93), Expect = 2e-04
Identities = 8/68 (11%), Positives = 18/68 (26%), Gaps = 9/68 (13%)
Query: 697 STLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSE 756
+ +IH + C+ C F + L + C+ C + +
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK---------TPMCEKCRKDSCQEAA 54
Query: 757 YQAHLRSH 764
+
Sbjct: 55 LNKDEGNE 62
Score = 37.3 bits (86), Expect = 0.001
Identities = 10/58 (17%), Positives = 16/58 (27%), Gaps = 7/58 (12%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPF 588
C C F + T + K C+ C K L+ + +G
Sbjct: 18 SQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNESGKKTS 68
Score = 35.4 bits (81), Expect = 0.006
Identities = 12/68 (17%), Positives = 19/68 (27%), Gaps = 12/68 (17%)
Query: 575 LSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCH-CGEIFQSRGK 633
+ H G+ C+ C F R S L++ K C C +
Sbjct: 6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT-----------PMCEKCRKDSCQEAA 54
Query: 634 LLWHQETH 641
L +
Sbjct: 55 LNKDEGNE 62
Score = 33.9 bits (77), Expect = 0.023
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 809 RSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKH 844
S ++H G+R C CG +S ++
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR 37
Score = 29.2 bits (65), Expect = 0.94
Identities = 15/85 (17%), Positives = 25/85 (29%), Gaps = 20/85 (23%)
Query: 630 SRGKLLWHQETH-ATVPKQCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDENVNCD 688
S G Q+ H ++C+ C F S+L+R + C+
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR------------------KTPMCE 43
Query: 689 IC-KIVVLKSTLKSHMRIHDNAKPF 712
C K ++ L K
Sbjct: 44 KCRKDSCQEAALNKDEGNESGKKTS 68
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 2e-09
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C+ CGK FHR +L H R+H G RP
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC C K+F L++H+ HTG P +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 40.2 bits (95), Expect = 6e-05
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ +G P+ C+ C + F R+++L +H++ IH
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRR-IH 35
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+GE+P+ C CGK ++ N+H + H
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35
Score = 36.3 bits (85), Expect = 0.001
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C+ C K+F+ +L H+ R+H P S
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHR-----RIHTGYRPSGPSS 45
Score = 34.0 bits (79), Expect = 0.009
Identities = 10/32 (31%), Positives = 11/32 (34%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F L H R H +P
Sbjct: 12 PYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 30.5 bits (70), Expect = 0.15
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
P+KC C + F+ + H R H RP +
Sbjct: 12 PYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor,
adipogenesis, CLCNKA, chloride channel Ka, rhodopsin,
IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 48
Score = 52.7 bits (127), Expect = 3e-09
Identities = 16/70 (22%), Positives = 22/70 (31%), Gaps = 26/70 (37%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVR 818
+ S +PF C + G CG F RS L+ H R
Sbjct: 2 SSGSSGTGEKPFACTWPG--------------------------CGWRFSRSDELSRHRR 35
Query: 819 VHNGERPFSC 828
H+G +P
Sbjct: 36 SHSGVKPSGP 45
Score = 50.0 bits (120), Expect = 2e-08
Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 550 HMRTHLKIKPYKCDV--CDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KP+ C C F + +LS H+ +H+G P +
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 40.4 bits (95), Expect = 6e-05
Identities = 15/73 (20%), Positives = 19/73 (26%), Gaps = 28/73 (38%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAH 760
S KPF+CT C F S E H
Sbjct: 2 SSGSSGTGEKPFACTW----------------------------PGCGWRFSRSDELSRH 33
Query: 761 LRSHRNIRPFTCN 773
RSH ++P +
Sbjct: 34 RRSHSGVKPSGPS 46
Score = 39.2 bits (92), Expect = 2e-04
Identities = 9/36 (25%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 815 AHVRVHNGERPFSCH--ICGKTSTTKSNHNKHVKTH 848
+ GE+PF+C CG + ++H ++H
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37
Score = 36.5 bits (85), Expect = 0.001
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 531 PLPC--PVCSKTFPSKPSLTLHMRTHLKIKPYKCD 563
P C P C F L+ H R+H +KP
Sbjct: 12 PFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 36.1 bits (84), Expect = 0.002
Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 6/50 (12%)
Query: 578 HKNTHTGNAPFPCN--MCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCG 625
++ TG PF C C F R L++H++ H K G
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRR-SHSGVKP---SGPSSG 48
Score = 29.6 bits (67), Expect = 0.37
Identities = 6/17 (35%), Positives = 7/17 (41%)
Query: 699 LKSHMRIHDNAKPFSCT 715
L H R H KP +
Sbjct: 30 LSRHRRSHSGVKPSGPS 46
Score = 27.7 bits (62), Expect = 1.7
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Query: 637 HQETHATV-PKQCTY--CTEKFTHTSSLTRHIRK 667
+ P CT+ C +F+ + L+RH R
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS 36
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 3e-09
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C +CGK F S +L H VH+GERP
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 48.3 bits (116), Expect = 8e-08
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC VC K+F + L H + H+G P +
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C +C + F+ S+L QH +H
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHS-VH 35
Score = 37.5 bits (88), Expect = 5e-04
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE+P+ C +CGK S+ +H H
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35
Score = 37.1 bits (87), Expect = 8e-04
Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C VC K+F +L H +H P S
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHH-----SVHSGERPSGPSS 45
Score = 35.2 bits (82), Expect = 0.004
Identities = 10/32 (31%), Positives = 11/32 (34%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C VC K F L H H +P
Sbjct: 12 PYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 30.9 bits (71), Expect = 0.097
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
P+KC+ C + F SS H H RP +
Sbjct: 12 PYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 25.6 bits (57), Expect = 9.7
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
C +C K + S L H +H +P +
Sbjct: 15 CQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Length = 46
Score = 52.1 bits (126), Expect = 3e-09
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCH 829
+K+Y C CGK F R+ L+ H ++H GE+P
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 48.3 bits (116), Expect = 8e-08
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ K YKC+ C K F +LS H+ HTG P +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 40.6 bits (96), Expect = 4e-05
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG + CN C + F R S L+QH+K IH
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQK-IH 35
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE+ + C+ CGK + S ++H K H
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/49 (24%), Positives = 15/49 (30%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S K + C C K F L HQ ++H P S
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQ-----KIHTGEKPSGPSS 45
Score = 35.6 bits (83), Expect = 0.003
Identities = 9/32 (28%), Positives = 11/32 (34%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
C C K F L+ H + H KP
Sbjct: 12 RYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.096
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
+KC C + F +S+ H + H +P +
Sbjct: 12 RYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 25.6 bits (57), Expect = 9.9
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
S L H +IH KP +
Sbjct: 25 NSQLSQHQKIHTGEKPSGPS 44
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 4e-09
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KP+KCD+C KSF +L+ H HT P +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K + C ICGK+F L H VH E+P
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 42.5 bits (101), Expect = 8e-06
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+PF C ICGK+ +S N+H H
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35
Score = 40.2 bits (95), Expect = 6e-05
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KPF C +C KSF + L H +H P S
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHS-----MVHTAEKPSGPSS 45
Score = 39.8 bits (94), Expect = 8e-05
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG PF C++C + F S L +H +H
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSM-VH 35
Score = 38.2 bits (90), Expect = 3e-04
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCD 563
P C +C K+F + L H H KP
Sbjct: 12 PFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 30.2 bits (69), Expect = 0.19
Identities = 11/46 (23%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + PFKC C + F S H H +P +
Sbjct: 1 GSSGSSGTGEK--PFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.59
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
CDIC K +S L H +H KP +
Sbjct: 15 CDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 26.3 bits (59), Expect = 4.9
Identities = 8/31 (25%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ P +C C + F S L RH
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSM 33
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.2 bits (126), Expect = 4e-09
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C+ CGK F YL H+R H+GE+P
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 46.8 bits (112), Expect = 2e-07
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPC 590
+ KPY C C K+F + L H TH+G P
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 41.0 bits (97), Expect = 3e-05
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ C CGK ++KS H++TH
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35
Score = 40.2 bits (95), Expect = 6e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KP+ C+ C K+F +K L +H TH
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35
Score = 39.1 bits (92), Expect = 1e-04
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
+ S +P+ C+ CG+ F K I H+R H +K +
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 15/32 (46%), Positives = 16/32 (50%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F SK L +HMRTH KP
Sbjct: 12 PYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 36.8 bits (86), Expect = 0.001
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ G P+ C+ C + F S L H + H
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMR-TH 35
Score = 30.2 bits (69), Expect = 0.24
Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTC 772
G + P+ C C + F S S H+R+H +P
Sbjct: 1 GSSGSSGAGEK--PYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 27.1 bits (61), Expect = 2.3
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ A P C+ C + F+ S L H+R
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMR 33
Score = 26.7 bits (60), Expect = 3.3
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
KS L HMR H KP +
Sbjct: 25 KSYLIIHMRTHSGEKPSGPS 44
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.8 bits (125), Expect = 4e-09
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ + K YKCDVC K F + L H+ HTG P +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 5e-09
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C +CGK F +S +L H RVH GE+P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S K + C VC K F +L HQ R+H P S
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQ-----RVHTGEKPSGPSS 45
Score = 39.4 bits (93), Expect = 1e-04
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE+ + C +CGK + S+ H + H
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35
Score = 38.7 bits (91), Expect = 2e-04
Identities = 8/34 (23%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ G + C++C + F + S+L H++ +H
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQR-VH 35
Score = 35.6 bits (83), Expect = 0.003
Identities = 11/32 (34%), Positives = 11/32 (34%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
C VC K F L H R H KP
Sbjct: 12 CYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.005
Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 728 GLHQWTHVSRMHM---PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G M +KC C + F SS Q H R H +P +
Sbjct: 1 GSSG-----SSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 2.5
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
CD+C K S L++H R+H KP +
Sbjct: 15 CDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 51.7 bits (125), Expect = 4e-09
Identities = 15/42 (35%), Positives = 15/42 (35%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
K Y C CGK F YL H R H GE S
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 46.7 bits (112), Expect = 2e-07
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPC 590
+ +KPY C+ C K+F + L H THTG +
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ G +P+ C+ CGK +KS H +TH
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35
Score = 39.8 bits (94), Expect = 8e-05
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KP+ C C K+F +K L +H TH
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35
Score = 37.1 bits (87), Expect = 6e-04
Identities = 12/32 (37%), Positives = 13/32 (40%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F SK L +H RTH
Sbjct: 12 PYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 36.7 bits (86), Expect = 9e-04
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ CN C + F+ S L H + H
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTR-TH 35
Score = 31.3 bits (72), Expect = 0.080
Identities = 10/45 (22%), Positives = 15/45 (33%), Gaps = 2/45 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTC 772
G + P+ C C + F S S H R+H +
Sbjct: 1 GSSGSSGTGMK--PYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 26.7 bits (60), Expect = 3.4
Identities = 8/31 (25%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ + P C C + F S L H R
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTR 33
Score = 26.7 bits (60), Expect = 3.7
Identities = 7/19 (36%), Positives = 7/19 (36%)
Query: 696 KSTLKSHMRIHDNAKPFSC 714
KS L H R H S
Sbjct: 25 KSYLIIHTRTHTGESGPSS 43
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.7 bits (125), Expect = 5e-09
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+ Y C CGK F R Y L +H R H GE+P
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ PY+C C K+F +L H+ TH G P +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 40.6 bits (96), Expect = 5e-05
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE P+ CH CGK + K H +TH
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S P+ C C K+F K+ L HQ TH
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35
Score = 37.5 bits (88), Expect = 5e-04
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C+ C + F R L H++ H
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQR-TH 35
Score = 37.5 bits (88), Expect = 5e-04
Identities = 13/32 (40%), Positives = 13/32 (40%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F K L H RTH KP
Sbjct: 12 PYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.17
Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + P++C C + F + +H R+H +P +
Sbjct: 1 GSSGSSGTGEN--PYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 25.5 bits (57), Expect = 8.4
Identities = 8/32 (25%), Positives = 12/32 (37%), Gaps = 3/32 (9%)
Query: 637 HQETHATV--PKQCTYCTEKFTHTSSLTRHIR 666
+ T P +C C + F+ L H R
Sbjct: 3 SGSSG-TGENPYECHECGKAFSRKYQLISHQR 33
Score = 25.5 bits (57), Expect = 8.7
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
K L SH R H KP +
Sbjct: 25 KYQLISHQRTHAGEKPSGPS 44
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Length = 46
Score = 51.8 bits (125), Expect = 5e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y+C CGK+F + L H RVH+GE+P
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 46.8 bits (112), Expect = 2e-07
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPY C C KSF A L H+ H+G P +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 39.5 bits (93), Expect = 1e-04
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P++C CGK+ S KH + H
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH 35
Score = 37.2 bits (87), Expect = 6e-04
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C C + F+ S L +H++ +H
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQR-VH 35
Score = 37.2 bits (87), Expect = 7e-04
Identities = 14/48 (29%), Positives = 17/48 (35%), Gaps = 8/48 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCK 745
S KP++C C KSF L HQ R+H P
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQ-----RVHSGEKPSGPS 44
Score = 35.6 bits (83), Expect = 0.002
Identities = 11/32 (34%), Positives = 12/32 (37%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K+F L H R H KP
Sbjct: 12 PYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 31.4 bits (72), Expect = 0.069
Identities = 11/49 (22%), Positives = 16/49 (32%), Gaps = 8/49 (16%)
Query: 728 GLHQWTHVSRMHM---PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G P+ CK C + F +S H R H +P +
Sbjct: 1 GSSG-----SSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 26.8 bits (60), Expect = 3.3
Identities = 8/31 (25%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 637 HQETH-ATVPKQCTYCTEKFTHTSSLTRHIR 666
+ P C C + F S L +H R
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQR 33
Score = 26.8 bits (60), Expect = 3.3
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
S L H R+H KP +
Sbjct: 25 ASCLLKHQRVHSGEKPSGPS 44
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 51.7 bits (125), Expect = 5e-09
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
++ Y C CGK F R +L H++ H E+
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 45.6 bits (109), Expect = 8e-07
Identities = 9/42 (21%), Positives = 15/42 (35%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ +PY C+ C K+F L +H H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 42.5 bits (101), Expect = 8e-06
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ +G P+ CN C ++F R+S+L +H K H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLK-RH 35
Score = 40.6 bits (96), Expect = 4e-05
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+GERP+ C+ CGK S+ +H+K H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35
Score = 37.5 bits (88), Expect = 5e-04
Identities = 10/49 (20%), Positives = 15/49 (30%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S +P+ C C K+F +L H + H S
Sbjct: 2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHL-----KRHFREKSSGPSS 45
Score = 37.1 bits (87), Expect = 7e-04
Identities = 9/40 (22%), Positives = 13/40 (32%), Gaps = 4/40 (10%)
Query: 527 KNVH----PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
+ P C C K F L H++ H + K
Sbjct: 4 GSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 32.5 bits (75), Expect = 0.027
Identities = 9/46 (19%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + P+ C C + F S HL+ H + +
Sbjct: 1 GSSGSSGSGER--PYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 28.3 bits (64), Expect = 1.1
Identities = 5/20 (25%), Positives = 8/20 (40%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
S L H++ H K +
Sbjct: 25 HSHLIEHLKRHFREKSSGPS 44
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid
binding, KIAA1227 protein, structural genomics; NMR
{Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Length = 107
Score = 53.8 bits (128), Expect = 6e-09
Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 3/92 (3%)
Query: 520 KDYQEHIKNVHPLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHK 579
++N C +C+ S H R C C F + + +H+
Sbjct: 5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEHE 62
Query: 580 NTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
+ C C R FK ++ +H+ +H
Sbjct: 63 SKCEYK-KLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 51.4 bits (122), Expect = 3e-08
Identities = 14/87 (16%), Positives = 23/87 (26%), Gaps = 3/87 (3%)
Query: 768 RPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFS 827
+ C C K H R C C F H + +
Sbjct: 15 EVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEH-ESKCEYKKLT 71
Query: 828 CHICGKTSTTKSNHNKHVKTHHARETI 854
C C +T + + +H H + +
Sbjct: 72 CLECMRTFKSSFSIWRHQVEVHNQNNM 98
Score = 51.1 bits (121), Expect = 4e-08
Identities = 22/92 (23%), Positives = 32/92 (34%), Gaps = 5/92 (5%)
Query: 700 KSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQA 759
S +N + + C +C + G H+ C C+ F+S Q
Sbjct: 5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC----RNAAVCPYCSLRFFSPELKQE 60
Query: 760 HLRSHRNIRPFTCNYCGRKFIRKFNCIRHVRE 791
H S + TC C R F F+ RH E
Sbjct: 61 H-ESKCEYKKLTCLECMRTFKSSFSIWRHQVE 91
Score = 43.7 bits (102), Expect = 2e-05
Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 3/84 (3%)
Query: 509 CDTCSEVFDKLKDYQEHIKNVHPL-PCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDK 567
C C+ L + H + CP CS F S P L + + K C C +
Sbjct: 19 CRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFS-PELKQEHESKCEYKKLTCLECMR 77
Query: 568 SFVTAQKLSDHKNT-HTGNAPFPC 590
+F ++ + H+ H N P
Sbjct: 78 TFKSSFSIWRHQVEVHNQNNMAPT 101
Score = 43.0 bits (100), Expect = 3e-05
Identities = 15/95 (15%), Positives = 28/95 (29%), Gaps = 7/95 (7%)
Query: 577 DHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYC-HCGEIFQSRGKLL 635
+ + C +C+ H+++ C +C F S
Sbjct: 6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR------NAAVCPYCSLRFFSPELKQ 59
Query: 636 WHQETHATVPKQCTYCTEKFTHTSSLTRHIRKNHD 670
H+ C C F + S+ RH + H+
Sbjct: 60 EHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 40.7 bits (94), Expect = 2e-04
Identities = 16/97 (16%), Positives = 25/97 (25%), Gaps = 13/97 (13%)
Query: 637 HQETHATVPKQCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDENVNCDICKIVVLK 696
QC C K + H R C C +
Sbjct: 8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR-------------NAAVCPYCSLRFFS 54
Query: 697 STLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWT 733
LK K +C C ++F + +++ HQ
Sbjct: 55 PELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVE 91
Score = 37.2 bits (85), Expect = 0.004
Identities = 19/92 (20%), Positives = 27/92 (29%), Gaps = 6/92 (6%)
Query: 670 DPRYLPVDRKKTDENVNCDIC-KIVVLKSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLG 728
+ E C +C + SH R+ NA C C F++
Sbjct: 2 SSGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQ 59
Query: 729 LHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAH 760
H+ + C C R F SS H
Sbjct: 60 EHESKCEYK---KLTCLECMRTFKSSFSIWRH 88
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 44
Score = 51.4 bits (124), Expect = 6e-09
Identities = 13/42 (30%), Positives = 14/42 (33%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C CGK F L H R H G S
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPC 590
+ KPY+C+ C K+F+ L H+ TH G +
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 40.6 bits (96), Expect = 4e-05
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ +GE+P+ C+ CGK KS H +TH
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35
Score = 39.8 bits (94), Expect = 8e-05
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KP+ C C K+F K L +H+ TH
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35
Score = 36.7 bits (86), Expect = 9e-04
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ +G P+ CN C + F S L H++ H
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHER-TH 35
Score = 35.2 bits (82), Expect = 0.003
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F K L +H RTH +
Sbjct: 12 PYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 30.2 bits (69), Expect = 0.17
Identities = 9/45 (20%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTC 772
G + P++C C + F S H R+H + +
Sbjct: 1 GSSGSSGSGEK--PYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 26.3 bits (59), Expect = 5.3
Identities = 10/29 (34%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSC 714
C+ C K + KS L H R H S
Sbjct: 15 CNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 26.0 bits (58), Expect = 7.1
Identities = 8/31 (25%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ + P +C C + F S L H R
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHER 33
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 6e-09
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKCDVC KSF L+ H+ HTG P +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 49.4 bits (119), Expect = 3e-08
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C +C K+F LT H R+H GE+P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ C +C K+ S+ H + H
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C++C + F+ S+L H++ IH
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQR-IH 35
Score = 38.3 bits (90), Expect = 3e-04
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C VC K+F SLT+H R H KP
Sbjct: 12 PYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 8/47 (17%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKC 744
S KP+ C VC KSF +L +HQ R+H P
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQ-----RIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.29
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
P+KC C++ F S H R H +P +
Sbjct: 12 PYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 2.7
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
CD+C K S+L H RIH KP +
Sbjct: 15 CDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 4.1
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 637 HQETHA-TVPKQCTYCTEKFTHTSSLTRHIR 666
+ P +C C + F + SSLT H R
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQR 33
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2eoi_A
Length = 46
Score = 51.3 bits (124), Expect = 7e-09
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K + C CGK+F S L H R+H GE+P
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 7e-07
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPC 590
+ KP++C C KSF + +L+ H+ HTG P
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 8e-05
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE+PF C CGK+ + S H + H
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35
Score = 37.9 bits (89), Expect = 3e-04
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KPF C C KSF L HQ R+H P S
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQ-----RIHTGEKPSGPSS 45
Score = 37.9 bits (89), Expect = 4e-04
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG PF C C + F S LA H++ IH
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQR-IH 35
Score = 36.3 bits (85), Expect = 0.002
Identities = 11/32 (34%), Positives = 12/32 (37%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K+F L H R H KP
Sbjct: 12 PFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.42
Identities = 12/48 (25%), Positives = 16/48 (33%), Gaps = 8/48 (16%)
Query: 728 GLHQWTHVSRMHM---PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTC 772
G PF+C C + F SS+ H R H +P
Sbjct: 1 GSSG-----SSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 3.3
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
C C K + S L +H RIH KP +
Sbjct: 15 CAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 26.3 bits (59), Expect = 4.5
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Query: 637 HQETHATV--PKQCTYCTEKFTHTSSLTRHIR 666
+ T P +C C + F+ +S L H R
Sbjct: 3 SGSSG-TGEKPFECAECGKSFSISSQLATHQR 33
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 7e-09
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCH 829
+K + C CGK F ++ +L +H RVH GE+P
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 48.3 bits (116), Expect = 9e-08
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KP++C+ C K F L H+ HTG P +
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 39.5 bits (93), Expect = 1e-04
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+GE+PF C CGK T S+ + H + H
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35
Score = 37.9 bits (89), Expect = 3e-04
Identities = 15/49 (30%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KPF C C K F +L HQ R+H P S
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQ-----RVHTGEKPSGPSS 45
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 577 DHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ +G PF C C + F + S+L H++ +H
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQR-VH 35
Score = 35.2 bits (82), Expect = 0.004
Identities = 11/32 (34%), Positives = 11/32 (34%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F L H R H KP
Sbjct: 12 PFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.036
Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 730 HQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
+ PF+C+ C + F +S +H R H +P +
Sbjct: 3 SGSSGSGEK--PFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 26.4 bits (59), Expect = 5.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
S L SH R+H KP +
Sbjct: 25 NSHLHSHQRVHTGEKPSGPS 44
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 7e-09
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K + C CGK++++ +LT H RVH GE+P
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KP+KC C KS+ L+ H+ HTG P +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 8e-05
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE+PF C CGK+ + + +H + H
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35
Score = 39.0 bits (92), Expect = 2e-04
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KPF C C KS+ + +L HQ R+H P S
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQ-----RVHTGEKPSGPSS 45
Score = 39.0 bits (92), Expect = 2e-04
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG PF C C + + + +L QH++ +H
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQR-VH 35
Score = 35.6 bits (83), Expect = 0.003
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K++ + LT H R H KP
Sbjct: 12 PFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.13
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
PFKC C + + H R H +P +
Sbjct: 12 PFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 7e-09
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K YSC +CGK F S +L H+RVH E
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 48.7 bits (117), Expect = 5e-08
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPY C+VC K+FV + L+ H HT +
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 41.3 bits (98), Expect = 3e-05
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE+P+SC++CGK ++ N+H++ H
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35
Score = 39.8 bits (94), Expect = 8e-05
Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+SC VC K+F +L H R+H S
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHL-----RVHTQETLSGPSS 45
Score = 39.8 bits (94), Expect = 9e-05
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ CN+C + F ++L QH + +H
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLR-VH 35
Score = 37.1 bits (87), Expect = 6e-04
Identities = 10/33 (30%), Positives = 12/33 (36%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCD 563
P C VC K F L H+R H +
Sbjct: 12 PYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 29.8 bits (68), Expect = 0.27
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
P+ C C + F S+ HLR H +
Sbjct: 12 PYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 28.2 bits (64), Expect = 1.1
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
C++C K VL + L H+R+H +
Sbjct: 15 CNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 7e-09
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C+ CGK F R L H + H GER
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 49.4 bits (119), Expect = 3e-08
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC C K+F L H+ +HTG +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 42.1 bits (100), Expect = 1e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE+P+ C CGK T KS + H ++H
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35
Score = 40.6 bits (96), Expect = 5e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KP+ C+ C K+F K L +HQ +H
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C+ C + F R S L H++ H
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQ-SH 35
Score = 37.5 bits (88), Expect = 5e-04
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 760 HLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
S +P+ C+ CG+ F RK H + H ++ +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 37.1 bits (87), Expect = 6e-04
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F K L +H ++H +
Sbjct: 12 PYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 30.9 bits (71), Expect = 0.11
Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + P+KC C + F S H +SH R +
Sbjct: 1 GSSGSSGTG--EKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 26.3 bits (59), Expect = 4.7
Identities = 5/20 (25%), Positives = 8/20 (40%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
KS L H + H + +
Sbjct: 25 KSGLHIHQQSHTGERHSGPS 44
Score = 25.5 bits (57), Expect = 9.8
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Query: 637 HQETHAT--VPKQCTYCTEKFTHTSSLTRHIR 666
+ T P +C+ C + FT S L H +
Sbjct: 3 SGSSG-TGEKPYKCSDCGKAFTRKSGLHIHQQ 33
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.3 bits (124), Expect = 8e-09
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCH 829
+K Y C CGK F R+ +L H +H GE+P
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC C K F L+ H+ HTG P +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 6e-05
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ CH CGK S+ +H H
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35
Score = 39.8 bits (94), Expect = 7e-05
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C+ C + F+R S+LA+H+ IH
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQL-IH 35
Score = 36.3 bits (85), Expect = 0.001
Identities = 13/49 (26%), Positives = 16/49 (32%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C C K F +L HQ +H P S
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQ-----LIHTGEKPSGPSS 45
Score = 34.4 bits (80), Expect = 0.006
Identities = 10/32 (31%), Positives = 10/32 (31%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F L H H KP
Sbjct: 12 PYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.29
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
P+KC C + F +S H H +P +
Sbjct: 12 PYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.0 bits (123), Expect = 8e-09
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C+ICGK+F + L H ++H GE+P
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 49.1 bits (118), Expect = 4e-08
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPY+C +C KSF +L H+ HTG P +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 41.4 bits (98), Expect = 2e-05
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE+P+ C ICGK+ T KS + H + H
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35
Score = 39.1 bits (92), Expect = 1e-04
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KP+ C++C KSF K L +HQ H
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35
Score = 37.1 bits (87), Expect = 8e-04
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C +C K+F K L +H + H KP
Sbjct: 12 PYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C++C + F + S L H++ IH
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQ-IH 35
Score = 30.2 bits (69), Expect = 0.23
Identities = 9/49 (18%), Positives = 16/49 (32%), Gaps = 8/49 (16%)
Query: 728 GLHQWTHVSRMHM---PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G P++C C + F S+ H + H +P +
Sbjct: 1 GSSG-----SSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 3.4
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
C IC K KS L H +IH KP +
Sbjct: 15 CSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.0 bits (123), Expect = 9e-09
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCH 829
+K Y C CGK F + YL+ H R+H GE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 49.4 bits (119), Expect = 3e-08
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC+ C K F LS H+ HTG P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE+P+ C+ CGK S ++H + H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35
Score = 39.0 bits (92), Expect = 1e-04
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ CN C + F+ S L++H++ IH
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQR-IH 35
Score = 37.1 bits (87), Expect = 6e-04
Identities = 13/47 (27%), Positives = 15/47 (31%), Gaps = 8/47 (17%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKC 744
S KP+ C C K F L HQ R+H P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQ-----RIHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/32 (34%), Positives = 12/32 (37%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F L+ H R H KP
Sbjct: 12 PYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.12
Identities = 11/49 (22%), Positives = 16/49 (32%), Gaps = 8/49 (16%)
Query: 728 GLHQWTHVSRMHM---PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G P+KC C + F +S H R H +P +
Sbjct: 1 GSSG-----SSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 26.3 bits (59), Expect = 5.1
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 637 HQETHA-TVPKQCTYCTEKFTHTSSLTRHIR 666
+ P +C C + F H S L+RH R
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQR 33
Score = 25.6 bits (57), Expect = 8.9
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
C+ C K+ S L H RIH KP +
Sbjct: 15 CNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 51.0 bits (123), Expect = 9e-09
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
++ + C CGK+F +S +L H R+H GE+P
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ +P+KC+ C KSF+ + L H+ HTG P +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 38.6 bits (91), Expect = 2e-04
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GERP C+ CGK+ ++ +H + H
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35
Score = 38.3 bits (90), Expect = 3e-04
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P CN C + F + ++L QH++ IH
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQR-IH 35
Score = 37.9 bits (89), Expect = 4e-04
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S +P C C KSF +L HQ R+H P S
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQ-----RIHTGEKPSGPSS 45
Score = 34.4 bits (80), Expect = 0.006
Identities = 11/32 (34%), Positives = 12/32 (37%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K+F L H R H KP
Sbjct: 12 PHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.18
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
P KC C + F S+ H R H +P +
Sbjct: 12 PHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.0 bits (123), Expect = 9e-09
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
++ Y C+ CGK F R L H R+H GE+P
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 46.3 bits (111), Expect = 4e-07
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ + Y+C C K+F L H+ HTG P +
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 40.9 bits (97), Expect = 3e-05
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GER + C CGK KS H + H
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 760 HLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
S R + C+ CG+ F RK I H R H +K +
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 38.2 bits (90), Expect = 3e-04
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S + + C+ C K+F K L +HQ H
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35
Score = 37.9 bits (89), Expect = 4e-04
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG + C+ C + F R S L H++ IH
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQR-IH 35
Score = 36.3 bits (85), Expect = 0.001
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
C C K F K +L +H R H KP
Sbjct: 12 HYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.36
Identities = 9/46 (19%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + ++C C + F S H R H +P +
Sbjct: 1 GSSGSSGTGER--HYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 3.4
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
KSTL H RIH KP +
Sbjct: 25 KSTLIMHQRIHTGEKPSGPS 44
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 51.0 bits (123), Expect = 1e-08
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y+C CGK+F R+ L H R+H+GE+P
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ K Y C C KSF A L H+ H+G P +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 39.8 bits (94), Expect = 7e-05
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+ ++C CGK+ + KH + H
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35
Score = 38.7 bits (91), Expect = 2e-04
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG + C C + F R L +H++ +H
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHER-LH 35
Score = 38.3 bits (90), Expect = 2e-04
Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S K ++C C KSF L H+ R+H P S
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHE-----RLHSGEKPSGPSS 45
Score = 35.6 bits (83), Expect = 0.002
Identities = 11/32 (34%), Positives = 12/32 (37%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
C C K+F P L H R H KP
Sbjct: 12 LYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.16
Identities = 9/46 (19%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + + CK C + F + H R H +P +
Sbjct: 1 GSSGSSGTGEK--LYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 26.7 bits (60), Expect = 3.5
Identities = 6/20 (30%), Positives = 8/20 (40%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
L H R+H KP +
Sbjct: 25 APCLLKHERLHSGEKPSGPS 44
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2ysv_A
Length = 46
Score = 51.0 bits (123), Expect = 1e-08
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C CGK F ++ +L H RVH GE+P
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 3e-07
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPY+C C K+F L H+ HTG P +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 3e-04
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C C + F + ++L QH++ +H
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQR-VH 35
Score = 37.9 bits (89), Expect = 3e-04
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE+P+ C CGK + ++ +H + H
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35
Score = 36.7 bits (86), Expect = 0.001
Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C C K+F +L HQ R+H P S
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQ-----RVHTGEKPSGPSS 45
Score = 34.8 bits (81), Expect = 0.005
Identities = 11/32 (34%), Positives = 11/32 (34%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F L H R H KP
Sbjct: 12 PYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.14
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
P++CK C + F ++ H R H +P +
Sbjct: 12 PYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 25.5 bits (57), Expect = 9.9
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Query: 637 HQETHATV--PKQCTYCTEKFTHTSSLTRHIR 666
+ T P +C C + F+ T+ L +H R
Sbjct: 3 SGSSG-TGEKPYECKECGKAFSQTTHLIQHQR 33
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 50.6 bits (122), Expect = 1e-08
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
E +K Y C+ CGK+F SY LT H H E+P
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 48.3 bits (116), Expect = 8e-08
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPY+C C KSF + +L+ H THT P +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 39.1 bits (92), Expect = 2e-04
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ C CGK+ + +H TH
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35
Score = 38.7 bits (91), Expect = 2e-04
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ G P+ C+ C + F L QH H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWI-TH 35
Score = 37.5 bits (88), Expect = 5e-04
Identities = 12/32 (37%), Positives = 14/32 (43%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K+F LT H TH + KP
Sbjct: 12 PYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 36.8 bits (86), Expect = 0.001
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S + KP+ C+ C KSF + L H TH
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35
Score = 30.2 bits (69), Expect = 0.20
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
P++C C + F S H +H +P +
Sbjct: 12 PYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 26.7 bits (60), Expect = 3.4
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ P QC+ C + F+ + LT+H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWI 33
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 50.6 bits (122), Expect = 1e-08
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCH 829
+K Y C CGK F ++ +L H R+H G +P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC+ C K F L++H+ HTG P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ CN C + F + S+LA H++ IH
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQR-IH 35
Score = 38.7 bits (91), Expect = 2e-04
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ C+ CGK T S+ H + H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35
Score = 37.1 bits (87), Expect = 7e-04
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C C K F +L HQ R+H P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQ-----RIHTGVKPSGPSS 45
Score = 34.4 bits (80), Expect = 0.006
Identities = 11/32 (34%), Positives = 12/32 (37%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F L H R H +KP
Sbjct: 12 PYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 31.0 bits (71), Expect = 0.10
Identities = 11/46 (23%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + P+KC C + F +S H R H ++P +
Sbjct: 1 GSSGSSGTGEK--PYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Length = 46
Score = 50.6 bits (122), Expect = 1e-08
Identities = 13/42 (30%), Positives = 15/42 (35%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
K Y C+ C KTF L H R H G +P
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 48.3 bits (116), Expect = 9e-08
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ +KPY C C K+F +L H+ +HTG P +
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 41.4 bits (98), Expect = 2e-05
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ G +P+ C C KT + KS H ++H
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35
Score = 40.6 bits (96), Expect = 4e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KP+ C+ C K+F K L +HQ +H
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35
Score = 38.3 bits (90), Expect = 3e-04
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
+ S ++P+ C+ C + F K I H R H K +
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 38.3 bits (90), Expect = 3e-04
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C+KTF K L +H R+H +KP
Sbjct: 12 PYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 37.1 bits (87), Expect = 7e-04
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C+ C + F S L H++ H
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQR-SH 35
Score = 32.9 bits (76), Expect = 0.020
Identities = 11/46 (23%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + P+ C C + F S+ H RSH ++P +
Sbjct: 1 GSSGSSGTGVK--PYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 26.3 bits (59), Expect = 5.7
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ V P C+ C + F+ S L H R
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQR 33
Score = 26.0 bits (58), Expect = 7.3
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
KS L H R H KP +
Sbjct: 25 KSQLIVHQRSHTGVKPSGPS 44
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens}
Length = 46
Score = 50.6 bits (122), Expect = 1e-08
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ + K +KC CD F A L H+N H G P +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 46.8 bits (112), Expect = 3e-07
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K + C C F ++ L H VH GE+P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ G + C CD F + S+L H+ +H
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQN-VH 35
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/32 (31%), Positives = 11/32 (34%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
C C F SL LH H+ KP
Sbjct: 12 TWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 37.5 bits (88), Expect = 5e-04
Identities = 7/34 (20%), Positives = 12/34 (35%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+ + C C + S+ H H
Sbjct: 2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35
Score = 36.8 bits (86), Expect = 0.001
Identities = 12/49 (24%), Positives = 16/49 (32%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S K + C C F +L LHQ +H+ P S
Sbjct: 2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQ-----NVHVGEKPSGPSS 45
Score = 32.1 bits (74), Expect = 0.042
Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + + +KC+ C+ F +S + H H +P +
Sbjct: 1 GSSGSSGMGEK--TWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 27.1 bits (61), Expect = 2.3
Identities = 7/31 (22%), Positives = 10/31 (32%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ +C C F+ SSL H
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQN 33
Score = 26.7 bits (60), Expect = 3.9
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
S+L+ H +H KP +
Sbjct: 25 ASSLRLHQNVHVGEKPSGPS 44
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 50.6 bits (122), Expect = 1e-08
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K + C CGK+F + L H R+H GE P
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KP++C C KSF +L H+ HTG P +
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 38.3 bits (90), Expect = 3e-04
Identities = 10/42 (23%), Positives = 14/42 (33%)
Query: 760 HLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
S +P C CG+ F I H R H + +
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 37.5 bits (88), Expect = 5e-04
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE+P C CGK+ + S H + H
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35
Score = 36.7 bits (86), Expect = 0.001
Identities = 15/49 (30%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP C C KSF L +HQ R+H P S
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQ-----RIHTGENPSGPSS 45
Score = 36.4 bits (85), Expect = 0.001
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P C C + F S L H++ IH
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQR-IH 35
Score = 36.0 bits (84), Expect = 0.002
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K+F L +H R H P
Sbjct: 12 PHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 30.6 bits (70), Expect = 0.16
Identities = 10/46 (21%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + P +C+ C + F +S+ H R H P +
Sbjct: 1 GSSGSSGTGEK--PHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 26.3 bits (59), Expect = 4.9
Identities = 8/31 (25%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ P +C C + F+ S L H R
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQR 33
Score = 26.0 bits (58), Expect = 8.0
Identities = 7/20 (35%), Positives = 8/20 (40%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
S L H RIH P +
Sbjct: 25 NSQLIVHQRIHTGENPSGPS 44
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 50.6 bits (122), Expect = 1e-08
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCH 829
+K + C CGK F ++ +L +H+R+H GE+P
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 47.5 bits (114), Expect = 2e-07
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KP+KC C K+F L+ H HTG P +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ +G PF C C + F++ +LA H + IH
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLR-IH 35
Score = 39.4 bits (93), Expect = 1e-04
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ +GE+PF C CGK + H++ H
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35
Score = 37.1 bits (87), Expect = 7e-04
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KPF C C K+F +L H R+H P S
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHL-----RIHTGEKPSGPSS 45
Score = 35.2 bits (82), Expect = 0.004
Identities = 11/32 (34%), Positives = 12/32 (37%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F L H+R H KP
Sbjct: 12 PFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.072
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
PFKCK C + F + +HLR H +P +
Sbjct: 12 PFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 25.5 bits (57), Expect = 8.9
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
L SH+RIH KP +
Sbjct: 25 NIHLASHLRIHTGEKPSGPS 44
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 46
Score = 50.6 bits (122), Expect = 1e-08
Identities = 13/42 (30%), Positives = 16/42 (38%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
++ Y C CGK F L H R H GE+P
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 6e-08
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ +PY+C C K+F T L H+ +HTG P +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 41.0 bits (97), Expect = 3e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
G+RP+ C CGK TKS+ H ++H
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35
Score = 38.7 bits (91), Expect = 2e-04
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 760 HLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
S RP+ C CG+ F K + I H R H +K +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S +P+ C C K+F TK +L H+ +H
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35
Score = 38.3 bits (90), Expect = 3e-04
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F +K SL H R+H KP
Sbjct: 12 PYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 5e-04
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C C + FK S+L H++ H
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRR-SH 35
Score = 31.4 bits (72), Expect = 0.078
Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + + P++C C + F + S H RSH +P +
Sbjct: 1 GSSGSSGTGQR--PYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 3.8
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 637 HQETH-ATVPKQCTYCTEKFTHTSSLTRHIR 666
+ P +C C + F SSL H R
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRR 33
Score = 26.3 bits (59), Expect = 5.9
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
KS+L H R H KP +
Sbjct: 25 KSSLICHRRSHTGEKPSGPS 44
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 50.2 bits (121), Expect = 1e-08
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C +C K F + +L H + H GE+P
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 6e-08
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPY+C VC K+F L+ H+ THTG P +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 2e-05
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ C +C K T K++ +H KTH
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35
Score = 38.7 bits (91), Expect = 2e-04
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KP+ C VC K+F K +L HQ TH
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C +C + F + ++LAQH+K H
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQK-TH 35
Score = 37.1 bits (87), Expect = 7e-04
Identities = 14/32 (43%), Positives = 15/32 (46%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C VCSK F K L H +TH KP
Sbjct: 12 PYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.12
Identities = 8/44 (18%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 730 HQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
+ P++CK C++ F + H ++H +P +
Sbjct: 3 SGSSGTGEK--PYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 50.6 bits (122), Expect = 1e-08
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K + C CGK F ++ L +H RVH GE+P
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 49.4 bits (119), Expect = 3e-08
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KP+KC+ C K F +L H+ HTG P +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 5e-05
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+GE+PF C CGK T S + H + H
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35
Score = 38.3 bits (90), Expect = 2e-04
Identities = 15/49 (30%), Positives = 16/49 (32%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KPF C C K F L HQ R+H P S
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQ-----RVHTGEKPSGPSS 45
Score = 37.9 bits (89), Expect = 3e-04
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 577 DHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ +G PF C C + F + S L H++ +H
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQR-VH 35
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 760 HLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
S +PF C CG++F + H R H +K +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 35.2 bits (82), Expect = 0.003
Identities = 11/32 (34%), Positives = 11/32 (34%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F L H R H KP
Sbjct: 12 PFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.092
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
PFKC+ C + F +S+ +H R H +P +
Sbjct: 12 PFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 6.7
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
C+ C K S L SH R+H KP +
Sbjct: 15 CEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 50.2 bits (121), Expect = 2e-08
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C CGK F S L H R+H GE+P
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPY CD C K+F + +L H+ HTG P +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+GE+P+ C CGK + +H + H
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35
Score = 38.6 bits (91), Expect = 2e-04
Identities = 9/34 (26%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ +G P+ C+ C + F + L +H++ IH
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQR-IH 35
Score = 38.6 bits (91), Expect = 2e-04
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 760 HLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
S +P+ C+YCG+ F +RH R H +K +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 36.3 bits (85), Expect = 0.001
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C C K+F L HQ R+H P S
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQ-----RIHTGEKPSGPSS 45
Score = 35.2 bits (82), Expect = 0.003
Identities = 11/32 (34%), Positives = 11/32 (34%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F L H R H KP
Sbjct: 12 PYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.12
Identities = 11/46 (23%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + P+ C C + F S+E H R H +P +
Sbjct: 1 GSSGSSGSGEK--PYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 2.6
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 637 HQETHA-TVPKQCTYCTEKFTHTSSLTRHIR 666
+ + P C YC + F ++ L RH R
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQR 33
Score = 25.9 bits (58), Expect = 6.0
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
CD C K L + L H RIH KP +
Sbjct: 15 CDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 50.2 bits (121), Expect = 2e-08
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C CGK F ++ +LT H R+H GE+P
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC+ C K F L++H HTG P +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ +G P+ CN C + F + S+L H + IH
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWR-IH 35
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ +GE+P+ C+ CGK T S+ H + H
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35
Score = 36.3 bits (85), Expect = 0.001
Identities = 12/47 (25%), Positives = 15/47 (31%), Gaps = 8/47 (17%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKC 744
S KP+ C C K F +L H R+H P
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHW-----RIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.004
Identities = 12/32 (37%), Positives = 12/32 (37%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F LT H R H KP
Sbjct: 12 PYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 30.5 bits (70), Expect = 0.15
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
P+KC C + F +S H R H +P +
Sbjct: 12 PYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 50.2 bits (121), Expect = 2e-08
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC C KSF +L H+ HTG +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 47.5 bits (114), Expect = 1e-07
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C+ CGK+F L H + H GER
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 42.1 bits (100), Expect = 1e-05
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ C CGK+ T KS H K H
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35
Score = 41.0 bits (97), Expect = 3e-05
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KP+ C+ C KSF K L +HQ H
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35
Score = 37.5 bits (88), Expect = 6e-04
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K+F K L +H + H +
Sbjct: 12 PYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 9/43 (20%), Positives = 18/43 (41%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
+ S +P+ C+ CG+ F K H + H ++ +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 36.7 bits (86), Expect = 0.001
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C+ C + F S L H+K H
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK-CH 35
Score = 30.6 bits (70), Expect = 0.14
Identities = 10/46 (21%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + P+KC C + F S + H + H R +
Sbjct: 1 GSSGSSGTGEK--PYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 26.7 bits (60), Expect = 3.4
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
C C K KS L+ H + H + +
Sbjct: 15 CSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 26.7 bits (60), Expect = 4.2
Identities = 8/31 (25%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ P +C+ C + FT S L H +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK 33
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 50.2 bits (121), Expect = 2e-08
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C++CGK F L+ H R+H+G++P
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 49.0 bits (118), Expect = 4e-08
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPY+C VC K+F Q LS H+ H+G P +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE+P+ C +CGK + + + + H + H
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35
Score = 38.6 bits (91), Expect = 2e-04
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C+VC K+F + +L +HQ R+H P S
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQ-----RIHSGKKPSGPSS 45
Score = 37.9 bits (89), Expect = 4e-04
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C VC K F + SL++H R H KP
Sbjct: 12 PYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 37.1 bits (87), Expect = 7e-04
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C++C + F +L+ H++ IH
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQR-IH 35
Score = 30.6 bits (70), Expect = 0.16
Identities = 9/49 (18%), Positives = 14/49 (28%), Gaps = 8/49 (16%)
Query: 728 GLHQWTHVSRMHM---PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G P++C C + F H R H +P +
Sbjct: 1 GSSG-----SSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 27.9 bits (63), Expect = 1.5
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ P +C+ C + F+H SL+ H R
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQR 33
Score = 26.3 bits (59), Expect = 5.4
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
C +C K + +L H RIH KP +
Sbjct: 15 CSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+ Y C CGK F R L +H + H+G+ S
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 42.9 bits (102), Expect = 5e-06
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPC 590
+ PY+C C K F +L H+ TH+G +
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 38.2 bits (90), Expect = 3e-04
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE P+ C CGK + K H KTH
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35
Score = 38.2 bits (90), Expect = 3e-04
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSC 800
+ S P+ C CG+ F RK + H + H + S
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C C + F R L H+K H
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQK-TH 35
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/34 (35%), Positives = 13/34 (38%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S P+ C C K F K L HQ TH
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35
Score = 34.8 bits (81), Expect = 0.004
Identities = 10/32 (31%), Positives = 11/32 (34%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F K L H +TH
Sbjct: 12 PYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 26.3 bits (59), Expect = 5.1
Identities = 7/45 (15%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTC 772
G + P++C C + F + +H ++H +
Sbjct: 1 GSSGSSGTGEN--PYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 26.3 bits (59), Expect = 5.5
Identities = 6/19 (31%), Positives = 7/19 (36%)
Query: 696 KSTLKSHMRIHDNAKPFSC 714
K L SH + H S
Sbjct: 25 KDQLVSHQKTHSGQSGPSS 43
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 50.2 bits (121), Expect = 2e-08
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K + C+ C K F+ L H R H GE+P
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPC 590
+ KP++C C K+F T L H+ THTG P
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 41.7 bits (99), Expect = 2e-05
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+PF C C K TKSN H +TH
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35
Score = 40.9 bits (97), Expect = 3e-05
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KPF C+ C+K+F TK NL +HQ TH
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35
Score = 39.8 bits (94), Expect = 7e-05
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
+ S +PF C+ C + F K N I H R H +K +
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 38.2 bits (90), Expect = 2e-04
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG PF C+ C + F SNL H++ H
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQR-TH 35
Score = 37.5 bits (88), Expect = 6e-04
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F +K +L +H RTH KP
Sbjct: 12 PFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 30.1 bits (69), Expect = 0.23
Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTC 772
G + PF+C C + F + S H R+H +P
Sbjct: 1 GSSGSSGTGEK--PFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 4.0
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
KS L H R H KP +
Sbjct: 25 KSNLIVHQRTHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 6.6
Identities = 8/31 (25%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ P +C+ C + F S+L H R
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQR 33
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 50.2 bits (121), Expect = 2e-08
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
++K Y C CGK ++R L H RVH GE+
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 49.8 bits (120), Expect = 2e-08
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC+ C K + L H+ H G +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 41.7 bits (99), Expect = 1e-05
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ + E+P+ C CGK + N + H + H
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35
Score = 41.7 bits (99), Expect = 1e-05
Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C C K + + NL +HQ R+HM S
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQ-----RVHMGEKTSGPSS 45
Score = 39.4 bits (93), Expect = 1e-04
Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ + P+ C C + + R NL H++ +H
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQR-VH 35
Score = 37.1 bits (87), Expect = 6e-04
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K + + +L +H R H+ K
Sbjct: 12 PYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 30.9 bits (71), Expect = 0.11
Identities = 9/49 (18%), Positives = 15/49 (30%), Gaps = 8/49 (16%)
Query: 728 GLHQWTHVSRMHM---PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G P+KC+ C +G+ H R H + +
Sbjct: 1 GSSG-----SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.8 bits (120), Expect = 2e-08
Identities = 16/42 (38%), Positives = 18/42 (42%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
KK Y C C KTF + +L H RVH GER
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 48.7 bits (117), Expect = 6e-08
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPY+C C K+F+ L+ HK HTG +
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 39.8 bits (94), Expect = 9e-05
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ +G++P+ C C KT + N+H + H
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35
Score = 38.3 bits (90), Expect = 3e-04
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ +G P+ C C + F + +L QHK+ +H
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKR-VH 35
Score = 38.3 bits (90), Expect = 3e-04
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C C+K+F +L H+ R+H S
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHK-----RVHTGERSSGPSS 45
Score = 36.0 bits (84), Expect = 0.002
Identities = 10/32 (31%), Positives = 11/32 (34%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C KTF L H R H +
Sbjct: 12 PYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 31.4 bits (72), Expect = 0.072
Identities = 10/46 (21%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + + P++CK C + F H R H R +
Sbjct: 1 GSSGSSGSGKK--PYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.8 bits (120), Expect = 2e-08
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC+ C K + + L H+ HTG P +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 49.8 bits (120), Expect = 2e-08
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCH 829
+K Y C CGK ++ + L H +VH GERP
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 41.4 bits (98), Expect = 2e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ C CGK +K N + H K H
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35
Score = 39.8 bits (94), Expect = 8e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KP+ C C K + +K+NL +HQ H
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35
Score = 39.0 bits (92), Expect = 1e-04
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C C + + NL H+K +H
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQK-VH 35
Score = 38.3 bits (90), Expect = 3e-04
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
+ S +P+ C CG+ + KFN H + H ++ +
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 37.1 bits (87), Expect = 8e-04
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K + SK +L +H + H +P
Sbjct: 12 PYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 31.7 bits (73), Expect = 0.055
Identities = 11/49 (22%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 728 GLHQWTHVSRMHM---PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G P+KC+ C +G+ S H + H RP +
Sbjct: 1 GSSG-----SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 25.6 bits (57), Expect = 9.8
Identities = 5/20 (25%), Positives = 9/20 (45%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
K L H ++H +P +
Sbjct: 25 KFNLDMHQKVHTGERPSGPS 44
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 49.8 bits (120), Expect = 2e-08
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 796 KKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
K + C+ C K F YL H + H E+P
Sbjct: 9 KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 45.6 bits (109), Expect = 7e-07
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 558 KPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
KP+ C C+K+F + L H+ TH P +
Sbjct: 9 KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F SK L +H +TH + KP
Sbjct: 10 PFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 37.5 bits (88), Expect = 4e-04
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 818 RVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+GE+PF C C K ++KS H +TH
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33
Score = 35.2 bits (82), Expect = 0.003
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 704 RIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
KPF C+ C+K+F +K L +HQ TH
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33
Score = 33.7 bits (78), Expect = 0.013
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 579 KNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
+ +G PF C+ C++ F S L H++ H
Sbjct: 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQ-TH 33
Score = 32.1 bits (74), Expect = 0.038
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
PF C C + F S S H ++H +P +
Sbjct: 10 PFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 27.1 bits (61), Expect = 2.8
Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
C C K KS L H + H KP +
Sbjct: 13 CSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.8 bits (120), Expect = 2e-08
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y+C CGK F L H R+H GE+P
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 49.1 bits (118), Expect = 5e-08
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPY C+ C K+F+ +L +H+ HTG P +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 3e-04
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C C + F S L +H++ IH
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQR-IH 35
Score = 38.3 bits (90), Expect = 3e-04
Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP++C C K+F L HQ R+H P S
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQ-----RIHTGEKPSGPSS 45
Score = 38.3 bits (90), Expect = 3e-04
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P++C CGK S +H + H
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35
Score = 35.6 bits (83), Expect = 0.002
Identities = 11/32 (34%), Positives = 11/32 (34%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F L H R H KP
Sbjct: 12 PYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.10
Identities = 11/49 (22%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 728 GLHQWTHVSRMHM---PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G P+ C+ C + F S+ Q H R H +P +
Sbjct: 1 GSSG-----SSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 2.5
Identities = 9/31 (29%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ P C C + F H S L H R
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQR 33
Score = 26.0 bits (58), Expect = 7.0
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
C+ C K + S L+ H RIH KP +
Sbjct: 15 CEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.8 bits (120), Expect = 2e-08
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C+ CGK+F + L H R+H GE P
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPY+C C KSF+ +L H+ HTG P +
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 41.0 bits (97), Expect = 3e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ C CGK+ KS + H + H
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35
Score = 39.8 bits (94), Expect = 7e-05
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KP+ C+ C KSF K L +HQ H
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35
Score = 37.9 bits (89), Expect = 4e-04
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSC 800
+ S +P+ C+ CG+ FI+K H R H +
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 36.4 bits (85), Expect = 0.001
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C+ C + F + S L H++ IH
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQR-IH 35
Score = 36.4 bits (85), Expect = 0.001
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K+F K L +H R H P
Sbjct: 12 PYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 28.7 bits (65), Expect = 0.63
Identities = 10/49 (20%), Positives = 15/49 (30%), Gaps = 8/49 (16%)
Query: 728 GLHQWTHVSRMHM---PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G P++C C + F S+ H R H P +
Sbjct: 1 GSSG-----SSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 26.0 bits (58), Expect = 8.0
Identities = 11/29 (37%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSC 714
C C K + KS L H RIH P
Sbjct: 15 CSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 25.6 bits (57), Expect = 8.1
Identities = 8/31 (25%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ P +C+ C + F S L H R
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQR 33
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 49.8 bits (120), Expect = 2e-08
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C CGK F + LT H R+H GE+P
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPY+C C K+F L+ H+ HTG P +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 7e-05
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C C + F + +NL QH++ IH
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQR-IH 35
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ C CGK K+N +H + H
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35
Score = 38.3 bits (90), Expect = 3e-04
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C C K+F K NL HQ R+H P S
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQ-----RIHTGEKPSGPSS 45
Score = 35.9 bits (84), Expect = 0.002
Identities = 13/32 (40%), Positives = 14/32 (43%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F K +LT H R H KP
Sbjct: 12 PYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.56
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
P++C C + F + H R H +P +
Sbjct: 12 PYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 25.5 bits (57), Expect = 9.3
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
K+ L H RIH KP +
Sbjct: 25 KANLTQHQRIHTGEKPSGPS 44
Score = 25.5 bits (57), Expect = 10.0
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 637 HQETH-ATVPKQCTYCTEKFTHTSSLTRHIR 666
+ P +C C + F ++LT+H R
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQR 33
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.8 bits (120), Expect = 2e-08
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
K + CT CGK F R L+ H ++H GE+P
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 3e-07
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ K ++C C K+F LS H+ HTG P +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 2e-05
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ G + F C CGK T KS + H K H
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 576 SDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG F C C + F R S L+ H+K IH
Sbjct: 1 GSSGSSGTGGKHFECTECGKAFTRKSTLSMHQK-IH 35
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S K F CT C K+F K L +HQ H
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35
Score = 36.7 bits (86), Expect = 0.001
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
C C K F K +L++H + H KP
Sbjct: 12 HFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.36
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
F+C C + F S H + H +P +
Sbjct: 12 HFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 2.0
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
KSTL H +IH KP +
Sbjct: 25 KSTLSMHQKIHTGEKPSGPS 44
Score = 26.3 bits (59), Expect = 4.6
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 637 HQETHA-TVPKQCTYCTEKFTHTSSLTRHIR 666
+ +CT C + FT S+L+ H +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQK 33
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.8 bits (120), Expect = 2e-08
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ K +KC+ C K+F + L+ H+ HTG P +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 49.0 bits (118), Expect = 4e-08
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
KK + C C KTF +S LT H R+H GE+P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 7e-05
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ G++ F C+ C KT T S+ H + H
Sbjct: 2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35
Score = 39.4 bits (93), Expect = 1e-04
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S K F C CKK+F +L +HQ R+H P S
Sbjct: 2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQ-----RIHTGEKPSGPSS 45
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ G F CN C + F + S+L H++ IH
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQR-IH 35
Score = 37.1 bits (87), Expect = 8e-04
Identities = 13/32 (40%), Positives = 14/32 (43%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
C C KTF SLT+H R H KP
Sbjct: 12 LFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.26
Identities = 12/46 (26%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + + FKC C + F SS H R H +P +
Sbjct: 1 GSSGSSGAGKK--LFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 3.7
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ A +C C + FT +SSLT H R
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQR 33
Score = 26.3 bits (59), Expect = 5.3
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
S+L H RIH KP +
Sbjct: 25 SSSLTVHQRIHTGEKPSGPS 44
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.8 bits (120), Expect = 2e-08
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C +C K F LT H RVH+GE+P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 48.7 bits (117), Expect = 5e-08
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPY+CDVC K+F L+ H+ H+G P +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 39.0 bits (92), Expect = 1e-04
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C++C + F +++L QH++ +H
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQR-VH 35
Score = 38.3 bits (90), Expect = 3e-04
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE+P+ C +C K + ++ +H + H
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVH 35
Score = 37.5 bits (88), Expect = 6e-04
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 8/47 (17%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKC 744
S KP+ C VC+K+F +L HQ R+H P
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQ-----RVHSGEKPSGP 43
Score = 37.1 bits (87), Expect = 6e-04
Identities = 14/32 (43%), Positives = 14/32 (43%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C VC K F SLT H R H KP
Sbjct: 12 PYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.25
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
P++C C + F + H R H +P +
Sbjct: 12 PYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 28.2 bits (64), Expect = 1.2
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ P +C C + F+H +SLT+H R
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQR 33
Score = 26.3 bits (59), Expect = 5.2
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
CD+C K ++L H R+H KP +
Sbjct: 15 CDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.8 bits (120), Expect = 3e-08
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC+ C K+F L+ H+ HTG P +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C CGK F LT H +H GE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 3e-05
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ CN C + F+ +SNL H+ IH
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQV-IH 35
Score = 38.3 bits (90), Expect = 2e-04
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ C+ CGK SN H H
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35
Score = 37.9 bits (89), Expect = 3e-04
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C C K+F NL HQ +H P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQ-----VIHTGEKPSGPSS 45
Score = 35.2 bits (82), Expect = 0.003
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F + +LT H H KP
Sbjct: 12 PYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.25
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
P+KC C + F + S H H +P +
Sbjct: 12 PYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.4 bits (119), Expect = 3e-08
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ +KPY C+ C K+F L+ H+ HTG P +
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 6e-08
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
K Y C CGK F LT H +H GE+P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ CN C + F YS+L H+ IH
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQV-IH 35
Score = 37.5 bits (88), Expect = 6e-04
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ G +P+ C+ CGK + S+ H H
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35
Score = 36.7 bits (86), Expect = 9e-04
Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C C K+F +L HQ +H P S
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQ-----VIHTGEKPSGPSS 45
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/32 (37%), Positives = 12/32 (37%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F SLT H H KP
Sbjct: 12 PYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.56
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
P+ C C + F S H H +P +
Sbjct: 12 PYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 26.3 bits (59), Expect = 4.8
Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ V P C C + F+ SSLT H
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQV 33
Score = 25.6 bits (57), Expect = 8.7
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 696 KSTLKSHMRIHDNAKPFSC 714
S+L +H IH KP
Sbjct: 25 YSSLTTHQVIHTGEKPSGP 43
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.4 bits (119), Expect = 3e-08
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C CGK F ++ L H R+H GE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC+ C K+F KL+ H+ HTG P +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ CN C + F + S LA+H++ IH
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQR-IH 35
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE+P+ C+ CGK + S +H + H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35
Score = 36.3 bits (85), Expect = 0.001
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C C K+F L HQ R+H P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQ-----RIHTGEKPSGPSS 45
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/32 (34%), Positives = 11/32 (34%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F L H R H KP
Sbjct: 12 PYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.12
Identities = 11/46 (23%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + P+KC C + F +S+ H R H +P +
Sbjct: 1 GSSGSSGTGEK--PYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 7.0
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
S L H RIH KP +
Sbjct: 25 TSKLARHQRIHTGEKPSGPS 44
Score = 25.6 bits (57), Expect = 9.5
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ P +C C + F+ TS L RH R
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQR 33
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.5 bits (119), Expect = 3e-08
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPY C+ C K+F LS H+ THTG P +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 49.5 bits (119), Expect = 3e-08
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C CGKTF + L+AH R H GE+P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 2e-05
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ +GE+P+ C+ CGKT + KS + H +TH
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KP+ C C K+F K L HQ TH
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35
Score = 38.3 bits (90), Expect = 3e-04
Identities = 14/32 (43%), Positives = 15/32 (46%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C KTF K L+ H RTH KP
Sbjct: 12 PYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ +G P+ CN C + F + S L+ H++ H
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQR-TH 35
Score = 32.9 bits (76), Expect = 0.023
Identities = 11/46 (23%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + P+ C C + F S AH R+H +P +
Sbjct: 1 GSSGSSGSGEK--PYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 3.1
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
KS L +H R H KP +
Sbjct: 25 KSILSAHQRTHTGEKPSGPS 44
Score = 26.0 bits (58), Expect = 7.5
Identities = 8/32 (25%), Positives = 13/32 (40%), Gaps = 3/32 (9%)
Query: 637 HQETHATVPK--QCTYCTEKFTHTSSLTRHIR 666
+ + K C C + F+ S L+ H R
Sbjct: 3 SGSSG-SGEKPYGCNECGKTFSQKSILSAHQR 33
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.4 bits (119), Expect = 3e-08
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPY C+ C KSF+ L+ H+ HTG P +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 7e-08
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C CGK+F + +L H R+H GE+P
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 5e-05
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ C+ CGK+ KS+ N+H + H
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
+ S +P+ CN CG+ FI+K + RH R H +K +
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ CN C + F + S+L +H++ IH
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRR-IH 35
Score = 38.6 bits (91), Expect = 2e-04
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KP+ C C KSF K +L H+ H
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35
Score = 35.6 bits (83), Expect = 0.002
Identities = 12/32 (37%), Positives = 13/32 (40%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K+F K L H R H KP
Sbjct: 12 PYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.18
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
P+ C C + F S H R H +P +
Sbjct: 12 PYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 6.6
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
KS L H RIH KP +
Sbjct: 25 KSHLNRHRRIHTGEKPSGPS 44
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 45
Score = 49.5 bits (119), Expect = 3e-08
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K + CT CGK+F L H R+H GE+
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 49.1 bits (118), Expect = 4e-08
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KP++C C KSF L H+ HTG P +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 41.4 bits (98), Expect = 2e-05
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ G++PF C CGK+ K N H + H
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35
Score = 41.0 bits (97), Expect = 3e-05
Identities = 16/34 (47%), Positives = 16/34 (47%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KPF CT C KSF K NL HQ H
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35
Score = 40.6 bits (96), Expect = 5e-05
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
+ S +PF C +CG+ F K N + H R H +K +
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 39.1 bits (92), Expect = 1e-04
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG PF C C + F+ NL H++ IH
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQR-IH 35
Score = 37.5 bits (88), Expect = 5e-04
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K+F +K +L H R H K
Sbjct: 12 PFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 32.5 bits (75), Expect = 0.030
Identities = 9/46 (19%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + + PF+C C + F + H R H + +
Sbjct: 1 GSSGSSGTGQK--PFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 27.5 bits (62), Expect = 1.8
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
K L +H RIH K +
Sbjct: 25 KGNLVTHQRIHTGEKSGPSS 44
Score = 26.3 bits (59), Expect = 4.4
Identities = 8/31 (25%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 637 HQETH-ATVPKQCTYCTEKFTHTSSLTRHIR 666
+ P +CT+C + F +L H R
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQR 33
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 49.4 bits (119), Expect = 3e-08
Identities = 13/41 (31%), Positives = 15/41 (36%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C C K F+ L H R H GE S
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPC 590
+ KPY+C+ C K+F T L H+ THTG +
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 42.9 bits (102), Expect = 6e-06
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ C+ C K TKSN H +TH
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35
Score = 41.3 bits (98), Expect = 2e-05
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KP+ C C+K+F TK NL +HQ TH
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSC 800
+ S +P+ CN C + F K N + H R H + S
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ CN C + F SNL H++ H
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQR-TH 35
Score = 37.5 bits (88), Expect = 5e-04
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F +K +L +H RTH
Sbjct: 12 PYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 30.5 bits (70), Expect = 0.13
Identities = 9/45 (20%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTC 772
G + P++C C + F + S H R+H +
Sbjct: 1 GSSGSSGTGEK--PYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 26.7 bits (60), Expect = 3.5
Identities = 7/19 (36%), Positives = 7/19 (36%)
Query: 696 KSTLKSHMRIHDNAKPFSC 714
KS L H R H S
Sbjct: 25 KSNLMVHQRTHTGESGPSS 43
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 49.5 bits (119), Expect = 3e-08
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC+ C K F+ + L H HTG P +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 47.9 bits (115), Expect = 9e-08
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C CGK F L H VH GE+P
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 2e-04
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ C CGK + + H H
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35
Score = 38.3 bits (90), Expect = 3e-04
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 577 DHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C C + F +L H +H
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHM-VH 35
Score = 37.9 bits (89), Expect = 4e-04
Identities = 12/49 (24%), Positives = 16/49 (32%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C C K F + +L H +H P S
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHH-----MVHTGEKPSGPSS 45
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
+ S +P+ C CG+ FI + + H H +K +
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 37.1 bits (87), Expect = 6e-04
Identities = 10/32 (31%), Positives = 11/32 (34%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F + L H H KP
Sbjct: 12 PYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.040
Identities = 10/46 (21%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + P+KC+ C +GF + H H +P +
Sbjct: 1 GSSGSSGTGEK--PYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 3.7
Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
C+ C K + + L +H +H KP +
Sbjct: 15 CEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 26.0 bits (58), Expect = 7.7
Identities = 6/31 (19%), Positives = 9/31 (29%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ P +C C + F L H
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHM 33
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2ena_A 2en4_A
Length = 46
Score = 49.1 bits (118), Expect = 4e-08
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K + C CGK F R L H ++H GE+P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KP+KC C K F L+ H HTG P +
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 40.6 bits (96), Expect = 4e-05
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+PF C CGK + +S N H K H
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35
Score = 39.8 bits (94), Expect = 9e-05
Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KPF C C K F + L +H ++H P S
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHH-----KLHTGEKPSGPSS 45
Score = 38.7 bits (91), Expect = 2e-04
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 577 DHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG PF C C + F R S L H K +H
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHK-LH 35
Score = 36.7 bits (86), Expect = 0.001
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F + +L +H + H KP
Sbjct: 12 PFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.29
Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Query: 730 HQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
+ PFKC C +GF S H + H +P +
Sbjct: 3 SGSSGTGEK--PFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 2.2
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
+S L H ++H KP +
Sbjct: 25 RSALNVHHKLHTGEKPSGPS 44
Score = 26.3 bits (59), Expect = 5.2
Identities = 7/31 (22%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ P +C C + F+ S+L H +
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHK 33
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.1 bits (118), Expect = 4e-08
Identities = 13/42 (30%), Positives = 16/42 (38%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C CGK F L H H+GE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 49.1 bits (118), Expect = 4e-08
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC+ C K+F L+ H+ TH+G P +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 39.8 bits (94), Expect = 9e-05
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE+P+ C+ CGK +S+ H TH
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35
Score = 38.3 bits (90), Expect = 2e-04
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KP+ C C K+F + +L +HQ TH
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35
Score = 38.3 bits (90), Expect = 3e-04
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F ++ SL +H TH KP
Sbjct: 12 PYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ CN C + F+ S+LA H+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQA-TH 35
Score = 32.9 bits (76), Expect = 0.020
Identities = 10/46 (21%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + P+KC C + F + S H +H +P +
Sbjct: 1 GSSGSSGTGEK--PYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 27.1 bits (61), Expect = 2.4
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
+S+L H H KP +
Sbjct: 25 RSSLAIHQATHSGEKPSGPS 44
Score = 26.3 bits (59), Expect = 5.8
Identities = 8/31 (25%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 637 HQETH-ATVPKQCTYCTEKFTHTSSLTRHIR 666
+ P +C C + F SSL H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQA 33
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.0 bits (118), Expect = 4e-08
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C CGK F ++ +L H +H GE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC+ C K F L H+ HTG P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ CN C + F + S+L +H+ IH
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRG-IH 35
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ C+ CGK T S+ +H H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35
Score = 37.1 bits (87), Expect = 9e-04
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
+ S +P+ CN CG+ F + + +RH H +K +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 35.5 bits (83), Expect = 0.003
Identities = 12/49 (24%), Positives = 16/49 (32%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C C K F +L H+ +H P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHR-----GIHTGEKPSGPSS 45
Score = 34.4 bits (80), Expect = 0.007
Identities = 10/32 (31%), Positives = 10/32 (31%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F L H H KP
Sbjct: 12 PYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 30.1 bits (69), Expect = 0.22
Identities = 10/49 (20%), Positives = 15/49 (30%), Gaps = 8/49 (16%)
Query: 728 GLHQWTHVSRMHM---PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G P+KC C + F +S H H +P +
Sbjct: 1 GSSG-----SSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 49.1 bits (118), Expect = 4e-08
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KP+KC+ C K F T + H+ +H+G P +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICG 832
+K + C CGK F+ + +H R H+GE+P G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 40.6 bits (96), Expect = 4e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ +GE+PF C CGK T S H ++H
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35
Score = 40.6 bits (96), Expect = 4e-05
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICG 804
+ S +PF C CG+ F C H R H +K + G
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 40.2 bits (95), Expect = 5e-05
Identities = 13/34 (38%), Positives = 14/34 (41%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KPF C C K FYT HQ +H
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35
Score = 37.5 bits (88), Expect = 5e-04
Identities = 11/48 (22%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCG 625
++ +G PF C C + F S H++ H +K G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQR-SHSGEKPSG---PSSG 46
Score = 36.0 bits (84), Expect = 0.002
Identities = 10/33 (30%), Positives = 12/33 (36%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCD 563
P C C K F + H R+H KP
Sbjct: 12 PFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 35.2 bits (82), Expect = 0.004
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCG 776
G + PFKC+ C +GFY++S+ +H RSH +P + G
Sbjct: 1 GSSGSSGSGEK--PFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 26.0 bits (58), Expect = 7.5
Identities = 7/31 (22%), Positives = 10/31 (32%), Gaps = 1/31 (3%)
Query: 637 HQETH-ATVPKQCTYCTEKFTHTSSLTRHIR 666
+ P +C C + F S H R
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQR 33
Score = 26.0 bits (58), Expect = 7.6
Identities = 7/20 (35%), Positives = 8/20 (40%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
S SH R H KP +
Sbjct: 25 NSQCYSHQRSHSGEKPSGPS 44
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 42
Score = 49.0 bits (118), Expect = 4e-08
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFS 827
+K Y C ICG F L +H+R+H G P S
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41
Score = 47.5 bits (114), Expect = 1e-07
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPF 588
+ KPY C++C F Q L H HTG+ P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 42.9 bits (102), Expect = 5e-06
Identities = 9/34 (26%), Positives = 13/34 (38%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE+P+ C ICG H++ H
Sbjct: 1 GSSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 39.8 bits (94), Expect = 7e-05
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
+ G P+PC +C F+ L H + IH
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLR-IH 34
Score = 38.6 bits (91), Expect = 2e-04
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPY 560
P PC +C F +L H+R H P
Sbjct: 11 PYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 35.6 bits (83), Expect = 0.002
Identities = 8/34 (23%), Positives = 10/34 (29%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
KP+ C +C F L H H
Sbjct: 1 GSSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 31.3 bits (72), Expect = 0.077
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFS 713
C+IC TLKSH+RIH + P S
Sbjct: 14 CEICGTRFRHLQTLKSHLRIHTGSGPSS 41
Score = 29.4 bits (67), Expect = 0.32
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFT 771
P+ C+ C F ++HLR H P +
Sbjct: 11 PYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41
Score = 29.4 bits (67), Expect = 0.33
Identities = 8/32 (25%), Positives = 12/32 (37%), Gaps = 3/32 (9%)
Query: 637 HQETHAT--VPKQCTYCTEKFTHTSSLTRHIR 666
+ P C C +F H +L H+R
Sbjct: 2 SSGSS-GGEKPYPCEICGTRFRHLQTLKSHLR 32
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.1 bits (118), Expect = 4e-08
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C CGK F LT H +H G++P
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPY+C+ C K+F L+ H+ HTG P +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 39.1 bits (92), Expect = 1e-04
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE+P+ C+ CGK + +S+ H H
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35
Score = 37.9 bits (89), Expect = 4e-04
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ CN C + F S+L H+ IH
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQA-IH 35
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/32 (37%), Positives = 13/32 (40%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F + SLT H H KP
Sbjct: 12 PYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 13/49 (26%), Positives = 18/49 (36%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C C K+F + +L HQ +H P S
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQ-----AIHTGKKPSGPSS 45
Score = 29.8 bits (68), Expect = 0.31
Identities = 8/44 (18%), Positives = 14/44 (31%), Gaps = 2/44 (4%)
Query: 730 HQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
+ P++C C + F S H H +P +
Sbjct: 3 SGSSGTGEK--PYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 27.9 bits (63), Expect = 1.5
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ P +C C + F+ SSLT H
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQA 33
Score = 26.3 bits (59), Expect = 5.4
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
+S+L +H IH KP +
Sbjct: 25 RSSLTTHQAIHTGKKPSGPS 44
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 49.1 bits (118), Expect = 4e-08
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
++ + C CGK F R +L H+R+H+ E+
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 48.3 bits (116), Expect = 7e-08
Identities = 9/42 (21%), Positives = 16/42 (38%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ +P+KC+ C K F L+ H H+ +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 40.2 bits (95), Expect = 6e-05
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ +G PF CN C + F R S+LA H + +H
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLR-LH 35
Score = 39.4 bits (93), Expect = 9e-05
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+GERPF C+ CGK +S+ H++ H
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/49 (24%), Positives = 16/49 (32%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S +PF C C K F + +L H R+H S
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHL-----RLHSREKSSGPSS 45
Score = 36.0 bits (84), Expect = 0.002
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F + L H+R H + K
Sbjct: 12 PFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 33.7 bits (78), Expect = 0.013
Identities = 13/46 (28%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + PFKC C +GF S HLR H + +
Sbjct: 1 GSSGSSGSGER--PFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 25.6 bits (57), Expect = 9.1
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
C+ C K +S L H+R+H K +
Sbjct: 15 CNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 49.1 bits (118), Expect = 4e-08
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
++ + C+ CGK F ++ H R+H GE+P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 46.8 bits (112), Expect = 3e-07
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ + ++C C K F+ A H+ HTG P +
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 41.0 bits (97), Expect = 3e-05
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ G C+ C + F + SN QH++ IH
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRR-IH 35
Score = 40.2 bits (95), Expect = 5e-05
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+GER C CGK SN +H + H
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35
Score = 36.7 bits (86), Expect = 0.001
Identities = 8/34 (23%), Positives = 11/34 (32%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S + C+ C K F N H+ H
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35
Score = 34.0 bits (79), Expect = 0.010
Identities = 9/32 (28%), Positives = 10/32 (31%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
C C K F + H R H KP
Sbjct: 12 GHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 28.3 bits (64), Expect = 0.89
Identities = 9/46 (19%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + +C C + F +S + H R H +P +
Sbjct: 1 GSSGSSGHGER--GHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 25.6 bits (57), Expect = 9.6
Identities = 6/31 (19%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 637 HQETHAT-VPKQCTYCTEKFTHTSSLTRHIR 666
+ +C+ C + F S+ +H R
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRR 33
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.1 bits (118), Expect = 5e-08
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C CGK F + T H R+H G+RP
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 47.6 bits (114), Expect = 2e-07
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC C K+F + H+ HTG P +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C C + F S+ QH++ +H
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQR-LH 35
Score = 38.3 bits (90), Expect = 3e-04
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
+ S +P+ C CG+ F +C +H R H ++ +
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 38.3 bits (90), Expect = 3e-04
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ C CGK S+ +H + H
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35
Score = 36.4 bits (85), Expect = 0.001
Identities = 11/32 (34%), Positives = 12/32 (37%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F S T H R H +P
Sbjct: 12 PYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 36.4 bits (85), Expect = 0.001
Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C C K+F + HQ R+H P S
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQ-----RLHTGQRPSGPSS 45
Score = 31.8 bits (73), Expect = 0.057
Identities = 12/46 (26%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + P+KC C + F +S H R H RP +
Sbjct: 1 GSSGSSGTGEK--PYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 26.8 bits (60), Expect = 3.8
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ P +C C + F SS T+H R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQR 33
Score = 25.6 bits (57), Expect = 8.5
Identities = 5/20 (25%), Positives = 9/20 (45%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
S+ H R+H +P +
Sbjct: 25 NSSCTQHQRLHTGQRPSGPS 44
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.1 bits (118), Expect = 5e-08
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC C K + L H+ HTG +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 48.7 bits (117), Expect = 6e-08
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C CGK + R L H RVH GE+
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 39.8 bits (94), Expect = 7e-05
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ +GE+P+ C CGK + + + H + H
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35
Score = 39.4 bits (93), Expect = 1e-04
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KP+ C C K + + +L HQ H
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35
Score = 39.1 bits (92), Expect = 2e-04
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
+ S +P+ C CG+ + R+ + H R H +K +
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 9/35 (25%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 577 DHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ +G P+ C C + +KR +L H++ +H
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQR-VH 35
Score = 36.4 bits (85), Expect = 0.001
Identities = 9/33 (27%), Positives = 11/33 (33%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCD 563
P C C K + + L H R H K
Sbjct: 12 PYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 31.7 bits (73), Expect = 0.052
Identities = 9/46 (19%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + P+KC C +G+ + H R H + +
Sbjct: 1 GSSGSSGSGEK--PYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 26.3 bits (59), Expect = 5.2
Identities = 5/20 (25%), Positives = 8/20 (40%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
+ L H R+H K +
Sbjct: 25 RLDLDFHQRVHTGEKLSGPS 44
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 48.7 bits (117), Expect = 5e-08
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
K Y C CGK F ++ L H RVH GE+P
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPY+C+ C K+F KL+ H+ HTG P +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ CN C + F + S LA+H++ +H
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQR-VH 35
Score = 38.3 bits (90), Expect = 3e-04
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ G +P+ C+ CGK + S +H + H
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35
Score = 36.4 bits (85), Expect = 0.001
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C C K+F L HQ R+H P S
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQ-----RVHTGEKPSGPSS 45
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/32 (34%), Positives = 11/32 (34%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F L H R H KP
Sbjct: 12 PYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.061
Identities = 10/49 (20%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 728 GLHQWTHVSRMHM---PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G P++C C + F +S+ H R H +P +
Sbjct: 1 GSSG-----SSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 26.0 bits (58), Expect = 6.5
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ P QC C + F+ TS L RH R
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQR 33
Score = 26.0 bits (58), Expect = 7.9
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
S L H R+H KP +
Sbjct: 25 TSKLARHQRVHTGEKPSGPS 44
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 48.7 bits (117), Expect = 5e-08
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KP KC C K+F +L H+ TH + +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 46.8 bits (112), Expect = 2e-07
Identities = 11/42 (26%), Positives = 14/42 (33%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K CT CGK F L H R H ++
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 39.5 bits (93), Expect = 1e-04
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KP CT C K+F K L +HQ TH
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35
Score = 39.1 bits (92), Expect = 1e-04
Identities = 12/43 (27%), Positives = 16/43 (37%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
+ S +P C CG+ F K I H R H K +
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 39.1 bits (92), Expect = 2e-04
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P C CGK KS H +TH
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35
Score = 37.9 bits (89), Expect = 3e-04
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P C C + F S L H++ H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQR-TH 35
Score = 37.9 bits (89), Expect = 4e-04
Identities = 12/32 (37%), Positives = 14/32 (43%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F K L +H RTH+ K
Sbjct: 12 PCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 32.5 bits (75), Expect = 0.031
Identities = 10/46 (21%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + P KC C + F S+ H R+H + + +
Sbjct: 1 GSSGSSGTGEK--PCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 26.0 bits (58), Expect = 6.3
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 637 HQETHAT-VPKQCTYCTEKFTHTSSLTRHIR 666
+ P +CT C + F S L H R
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQR 33
Score = 26.0 bits (58), Expect = 6.8
Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
C C K KS L H R H + K +
Sbjct: 15 CTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 48.6 bits (117), Expect = 5e-08
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+ + C+ CGK F L H ++H GERP
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 48.3 bits (116), Expect = 9e-08
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ P+ C C K F L H+ HTG P +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 43.6 bits (104), Expect = 3e-06
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE PF C CGK T K+N H K H
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35
Score = 40.6 bits (96), Expect = 5e-05
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S PF C+ C K F K NL +HQ H
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35
Score = 40.2 bits (95), Expect = 6e-05
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
+ S PF C+ CG+ F K N I H + H ++ +
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG PF C+ C + F +NL H+K IH
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQK-IH 35
Score = 35.9 bits (84), Expect = 0.002
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F K +L +H + H +P
Sbjct: 12 PFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 31.3 bits (72), Expect = 0.076
Identities = 10/46 (21%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + PF C C + F + H + H RP +
Sbjct: 1 GSSGSSGTGEN--PFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 26.3 bits (59), Expect = 5.3
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
C C K+ K+ L H +IH +P +
Sbjct: 15 CSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 26.3 bits (59), Expect = 5.4
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 637 HQETH-ATVPKQCTYCTEKFTHTSSLTRHIR 666
+ P C+ C + FTH ++L H +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQK 33
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 48.7 bits (117), Expect = 6e-08
Identities = 11/41 (26%), Positives = 14/41 (34%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K + C CG F S L H+R H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 46.4 bits (111), Expect = 3e-07
Identities = 9/41 (21%), Positives = 15/41 (36%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPC 590
+ KP++C C +F + L H +H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 43.3 bits (103), Expect = 4e-06
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+PF C CG + + KH+++H
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35
Score = 38.3 bits (90), Expect = 3e-04
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSC 800
+ S +PF C CG F + +H+R HE
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCD 563
P C C F SL H+R+H + P
Sbjct: 12 PFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 37.2 bits (87), Expect = 8e-04
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKK 615
++ TG PF C C +F +L +H + H +
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLR-SHERTD 39
Score = 34.9 bits (81), Expect = 0.005
Identities = 10/34 (29%), Positives = 13/34 (38%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KPF C C +F +L H +H
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35
Score = 34.5 bits (80), Expect = 0.006
Identities = 14/45 (31%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTC 772
G + PF+CK C F S HLRSH P
Sbjct: 1 GSSGSSGTGEK--PFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 29.1 bits (66), Expect = 0.46
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Query: 637 HQETHAT--VPKQCTYCTEKFTHTSSLTRHIR 666
+ T P QC C F+ + SL +H+R
Sbjct: 3 SGSSG-TGEKPFQCKECGMNFSWSCSLFKHLR 33
Score = 27.9 bits (63), Expect = 1.5
Identities = 7/29 (24%), Positives = 10/29 (34%), Gaps = 1/29 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSC 714
C C +L H+R H+ P
Sbjct: 15 CKECGMNFSWSCSLFKHLRSHERTDPSGP 43
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 48.7 bits (117), Expect = 6e-08
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K + C CGK F L H R+H GE+P
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KP+ C C K+F L+ H+ HTG P +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 5e-05
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+PF C CGK + N+H + H
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35
Score = 40.2 bits (95), Expect = 6e-05
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG PF C C + F + L QH++ IH
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRR-IH 35
Score = 38.7 bits (91), Expect = 2e-04
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
+ S +PF C CG+ F +H R H +K +
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 3e-04
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KPF C C K+F L H+ R+H P S
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHR-----RIHTGEKPSGPSS 45
Score = 35.6 bits (83), Expect = 0.002
Identities = 11/32 (34%), Positives = 11/32 (34%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F L H R H KP
Sbjct: 12 PFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.34
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
PF C C + F H R H +P +
Sbjct: 12 PFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 3.6
Identities = 7/31 (22%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ P C C + F+ L +H R
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRR 33
Score = 25.9 bits (58), Expect = 6.2
Identities = 7/20 (35%), Positives = 8/20 (40%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
L H RIH KP +
Sbjct: 25 HIGLNQHRRIHTGEKPSGPS 44
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 48.7 bits (117), Expect = 7e-08
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
++ Y C+ CGK F + L+ H R+H GE+P
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ + Y+C C K+F+ LS H+ H G P +
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 39.4 bits (93), Expect = 9e-05
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GER + C CGK KS + H + H
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35
Score = 38.3 bits (90), Expect = 3e-04
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S + + C+ C K+F K L +HQ H
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35
Score = 37.5 bits (88), Expect = 5e-04
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 760 HLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
S R + C+ CG+ FI+K H R H +K +
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG + C+ C + F + S L+ H++ IH
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQR-IH 35
Score = 36.3 bits (85), Expect = 0.001
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
C C K F K +L++H R H KP
Sbjct: 12 HYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.080
Identities = 10/46 (21%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + ++C C + F S H R HR +P +
Sbjct: 1 GSSGSSGTGER--HYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 26.7 bits (60), Expect = 3.4
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
KSTL H RIH KP +
Sbjct: 25 KSTLSMHQRIHRGEKPSGPS 44
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 48.3 bits (116), Expect = 7e-08
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPF 588
+ KPYKC+ C FV L H HTG+ P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 47.5 bits (114), Expect = 1e-07
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFS 827
+K Y C CG F + +L AHV +H G P S
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 40.6 bits (96), Expect = 3e-05
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE+P+ C CG ++ HV H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 38.3 bits (90), Expect = 2e-04
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
+ G P+ C C F + ++L H IH
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVL-IH 34
Score = 34.8 bits (81), Expect = 0.004
Identities = 8/33 (24%), Positives = 10/33 (30%)
Query: 702 HMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
KP+ C C F +L H H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 34.8 bits (81), Expect = 0.005
Identities = 10/40 (25%), Positives = 16/40 (40%)
Query: 760 HLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYS 799
S +P+ C CG +F++ + HV H S
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 34.8 bits (81), Expect = 0.005
Identities = 8/30 (26%), Positives = 9/30 (30%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPY 560
P C C F L H+ H P
Sbjct: 11 PYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 30.2 bits (69), Expect = 0.17
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFT 771
P+KC++C F + +AH+ H P +
Sbjct: 11 PYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 27.9 bits (63), Expect = 1.3
Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFS 713
C+ C V + L++H+ IH + P S
Sbjct: 14 CETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 27.1 bits (61), Expect = 2.7
Identities = 6/31 (19%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 637 HQETHA-TVPKQCTYCTEKFTHTSSLTRHIR 666
+ P +C C +F + L H+
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVL 32
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 48.3 bits (116), Expect = 8e-08
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C CGK F ++ +L H RVH G +P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC+ C K F L+ H+ HTG P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ CN C + F + S+LA+H++ +H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRR-VH 35
Score = 38.3 bits (90), Expect = 2e-04
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ C+ CGK T S+ +H + H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35
Score = 35.6 bits (83), Expect = 0.002
Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C C K F +L H+ R+H P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHR-----RVHTGGKPSGPSS 45
Score = 34.0 bits (79), Expect = 0.009
Identities = 11/32 (34%), Positives = 11/32 (34%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F L H R H KP
Sbjct: 12 PYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 31.0 bits (71), Expect = 0.12
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
P+KC C + F +S H R H +P +
Sbjct: 12 PYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens}
Length = 46
Score = 47.9 bits (115), Expect = 9e-08
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ + PYKC C+KSF +L H+ HT P +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 47.5 bits (114), Expect = 1e-07
Identities = 11/41 (26%), Positives = 15/41 (36%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
Y C+ C K+F L H R+H E+P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S P+ C+ C+KSF K L +HQ RMH P S
Sbjct: 2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQ-----RMHTREKPSGPSS 45
Score = 37.9 bits (89), Expect = 3e-04
Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ G P+ C+ C++ F L H++ +H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQR-MH 35
Score = 37.5 bits (88), Expect = 5e-04
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K+F K L +H R H + KP
Sbjct: 12 PYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 37.1 bits (87), Expect = 7e-04
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ G P+ C C K+ + K H + H
Sbjct: 2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35
Score = 35.6 bits (83), Expect = 0.002
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
+ S + P+ C+ C + F K + H R H +K +
Sbjct: 2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 31.4 bits (72), Expect = 0.093
Identities = 10/46 (21%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + P+KC C + F H R H +P +
Sbjct: 1 GSSGSSGAGVN--PYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 27.5 bits (62), Expect = 2.0
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ A V P +C+ C + F+ L H R
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQR 33
Score = 26.0 bits (58), Expect = 6.1
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
K L H R+H KP +
Sbjct: 25 KLRLLVHQRMHTREKPSGPS 44
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 47.9 bits (115), Expect = 1e-07
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
KK Y C CGK F ++ +L H +H GE+P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC+ C K F L+ H+ HTG P +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ CN C + F + S+LA+H+ IH
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRG-IH 35
Score = 39.4 bits (93), Expect = 1e-04
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ G++P+ C+ CGK T S+ +H H
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/49 (24%), Positives = 16/49 (32%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C C K F +L H+ +H P S
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHR-----GIHTGEKPSGPSS 45
Score = 33.6 bits (78), Expect = 0.012
Identities = 10/32 (31%), Positives = 10/32 (31%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F L H H KP
Sbjct: 12 PYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.14
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
P+KC C + F +S H H +P +
Sbjct: 12 PYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 47.9 bits (115), Expect = 1e-07
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
++ Y CT+CGK F L H ++H GE+P
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ +PY C VC K+F L H+ HTG P +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 2e-05
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GERP+ C +CGK T +SN KH K H
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35
Score = 39.0 bits (92), Expect = 2e-04
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S +P+ CTVC K+F + NL HQ H
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35
Score = 38.6 bits (91), Expect = 2e-04
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSC 800
+ S RP+ C CG+ F + N I+H + H +K
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 38.2 bits (90), Expect = 3e-04
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C +C + F SNL +H+K IH
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQK-IH 35
Score = 37.5 bits (88), Expect = 6e-04
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C VC K F + +L H + H KP
Sbjct: 12 PYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.28
Identities = 9/46 (19%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + P+ C C + F S H + H +P +
Sbjct: 1 GSSGSSGTGER--PYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 2.8
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 637 HQETH-ATVPKQCTYCTEKFTHTSSLTRHIR 666
+ P CT C + FT S+L +H +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQK 33
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Length = 42
Score = 47.9 bits (115), Expect = 1e-07
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 796 KKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
Y C+ CGK F+R L +H R H GE S
Sbjct: 9 NPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 41.3 bits (98), Expect = 2e-05
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 552 RTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPC 590
PY+C C K+F +L H+ TH G +
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 36.3 bits (85), Expect = 0.001
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 762 RSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSC 800
P+ C+ CG+ F RK I H R H + S
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 818 RVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+GE P+ C CGK K H +TH
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTH 33
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/32 (34%), Positives = 11/32 (34%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F K L H RTH
Sbjct: 10 PYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 35.6 bits (83), Expect = 0.002
Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 579 KNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
+ +G P+ C+ C + F R L H++ H
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQR-TH 33
Score = 33.3 bits (77), Expect = 0.016
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 704 RIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
P+ C+ C K+F K L HQ TH
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTH 33
Score = 28.2 bits (64), Expect = 1.0
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTC 772
P++C C + F + +H R+H +
Sbjct: 10 PYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 25.9 bits (58), Expect = 5.5
Identities = 7/19 (36%), Positives = 7/19 (36%)
Query: 696 KSTLKSHMRIHDNAKPFSC 714
K L SH R H S
Sbjct: 23 KDQLISHQRTHAGESGPSS 41
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 47.9 bits (115), Expect = 1e-07
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C CGK F ++ +L H +H GE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 1e-07
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPYKC+ C K F L+ H+ HTG P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ CN C + F + S+LA+H+ IH
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRG-IH 35
Score = 38.6 bits (91), Expect = 2e-04
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ C+ CGK T S+ +H H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/49 (24%), Positives = 16/49 (32%), Gaps = 8/49 (16%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHM---PFKCKS 746
S KP+ C C K F +L H+ +H P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHR-----GIHTGEKPSGPSS 45
Score = 34.0 bits (79), Expect = 0.009
Identities = 10/32 (31%), Positives = 10/32 (31%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F L H H KP
Sbjct: 12 PYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.19
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
P+KC C + F +S H H +P +
Sbjct: 12 PYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 47.6 bits (114), Expect = 1e-07
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
K Y+C CGK F R ++LT H ++H + S
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 43.3 bits (103), Expect = 4e-06
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPC 590
+ K Y C+ C K+F L+ H+ HT +
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 41.0 bits (97), Expect = 3e-05
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 577 DHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ T + + CN C + F R +L +H+K IH
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQK-IH 35
Score = 38.7 bits (91), Expect = 2e-04
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ ++C+ CGK T + +H K H
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35
Score = 37.9 bits (89), Expect = 4e-04
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 760 HLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSC 800
S + + + CN CG+ F R F+ RH + H K S
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 35.6 bits (83), Expect = 0.002
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S ++K ++C C K+F ++L HQ H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35
Score = 26.4 bits (59), Expect = 4.7
Identities = 8/31 (25%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ C C + FT LTRH +
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQK 33
Score = 25.6 bits (57), Expect = 8.5
Identities = 8/32 (25%), Positives = 10/32 (31%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
C C K F LT H + H +
Sbjct: 12 SYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 42
Score = 47.2 bits (113), Expect = 2e-07
Identities = 15/40 (37%), Positives = 18/40 (45%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFS 827
+K Y C CGK F + L H+RVH G P S
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 46.4 bits (111), Expect = 4e-07
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPF 588
+ KPY+CD C K+F L H HTG+ P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 42.2 bits (100), Expect = 1e-05
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE+P+ C CGK + K + H++ H
Sbjct: 1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 39.1 bits (92), Expect = 1e-04
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 702 HMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
KP+ C C K+F K +L +H H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 37.9 bits (89), Expect = 4e-04
Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
+ G P+ C+ C + F + +L H + +H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR-VH 34
Score = 34.1 bits (79), Expect = 0.009
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPY 560
P C C K F K SL +H+R H P
Sbjct: 11 PYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 28.7 bits (65), Expect = 0.66
Identities = 8/42 (19%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 730 HQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFT 771
+ P++C C + F H+R H P +
Sbjct: 2 SSGSSGGEK--PYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 28.3 bits (64), Expect = 1.1
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ P +C C + F+ SL HIR
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR 32
Score = 25.6 bits (57), Expect = 8.9
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFS 713
CD C K K +L H+R+H + P S
Sbjct: 14 CDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 47.1 bits (113), Expect = 2e-07
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ KPY C C K+F L H+ HT P +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C CGK F L H ++H ++P
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 41.7 bits (99), Expect = 1e-05
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ C CGK T +SN KH K H
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCT 801
+ S +P+ C CG+ F + N I+H + H +K +
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 38.3 bits (90), Expect = 3e-04
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KP+ C C K+F + NL HQ H
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35
Score = 37.9 bits (89), Expect = 4e-04
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C C + F SNL +H+K IH
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQK-IH 35
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F + +L H + H K KP
Sbjct: 12 PYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 29.0 bits (66), Expect = 0.50
Identities = 9/46 (19%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCN 773
G + P+ C C + F S H + H +P +
Sbjct: 1 GSSGSSGTGEK--PYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 26.7 bits (60), Expect = 4.0
Identities = 8/31 (25%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ P C C + FT S+L +H +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQK 33
Score = 25.6 bits (57), Expect = 8.3
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 696 KSTLKSHMRIHDNAKPFSCT 715
+S L H +IH KP +
Sbjct: 25 RSNLIKHQKIHTKQKPSGPS 44
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 46.7 bits (112), Expect = 2e-07
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPC 590
+ KPY+C C K+F L H+ HTG P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 46.3 bits (111), Expect = 4e-07
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K Y C CGK F L H ++H GE+P
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 41.7 bits (99), Expect = 2e-05
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE+P+ C CGK T +SN H K H
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S KP+ C C K+F + NL HQ H
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35
Score = 38.3 bits (90), Expect = 3e-04
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 577 DHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C C + F SNL H+K IH
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQK-IH 35
Score = 36.3 bits (85), Expect = 0.001
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C K F + +L H + H KP
Sbjct: 12 PYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.001
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSC 800
+ S +P+ C CG+ F + N H + H +K
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 3.8
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTC 772
P++C C + F S H + H +P
Sbjct: 12 PYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 46.4 bits (111), Expect = 3e-07
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
K + C CG+ F +L H R+H GE+P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 44.5 bits (106), Expect = 2e-06
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPC 590
+ K ++C C + F L+ H+ HTG P
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 41.8 bits (99), Expect = 2e-05
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ + C+ C R F S+L QH++ IH
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQR-IH 35
Score = 39.5 bits (93), Expect = 1e-04
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ + CH CG+ T KS+ N+H + H
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35
Score = 37.1 bits (87), Expect = 6e-04
Identities = 10/34 (29%), Positives = 13/34 (38%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S + K C C + F K +L HQ H
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35
Score = 32.1 bits (74), Expect = 0.039
Identities = 10/32 (31%), Positives = 11/32 (34%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
C C + F K L H R H KP
Sbjct: 12 SHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 28.7 bits (65), Expect = 0.66
Identities = 12/45 (26%), Positives = 15/45 (33%), Gaps = 2/45 (4%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTC 772
G + S +C C RGF S H R H +P
Sbjct: 1 GSSGSSGSSTK--SHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 2.7
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 687 CDIC-KIVVLKSTLKSHMRIHDNAKPFSCT 715
C C + LKS L H RIH KP +
Sbjct: 15 CHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 3.5
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ ++ QC C FT S L +H R
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQR 33
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Length = 42
Score = 45.3 bits (108), Expect = 7e-07
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFS 827
+ Y C CGK+F + L H R + P S
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 39.2 bits (92), Expect = 1e-04
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPF 588
+ PY C C KSF L+ H+ + + + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 38.8 bits (91), Expect = 2e-04
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
GE P+ C CGK+ T + + H ++
Sbjct: 1 GSSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34
Score = 36.5 bits (85), Expect = 0.001
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYK 561
P C C K+F + SL +H R+ + P
Sbjct: 11 PYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 34.9 bits (81), Expect = 0.003
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 702 HMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
P+ C C KSF + +L +HQ +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34
Score = 34.9 bits (81), Expect = 0.004
Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKK 615
+ G P+ C C + F + +LA H++ +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQR-SCSQSG 38
Score = 27.2 bits (61), Expect = 2.2
Identities = 5/18 (27%), Positives = 8/18 (44%)
Query: 696 KSTLKSHMRIHDNAKPFS 713
+ +L H R + P S
Sbjct: 24 RGSLAVHQRSCSQSGPSS 41
Score = 26.9 bits (60), Expect = 3.0
Identities = 8/31 (25%), Positives = 11/31 (35%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFT 771
P+ C C + F H RS P +
Sbjct: 11 PYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 41
Score = 44.9 bits (107), Expect = 1e-06
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 796 KKYSCTICGKTFHRSYYLTAHVRVHNGERPFS 827
+ Y C CGK+F + LT H R+H G P S
Sbjct: 9 RVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 36.4 bits (85), Expect = 0.001
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 558 KPYKCDVCDKSFVTAQKLSDHKNTHTGNAPF 588
+ Y+C C KSF L+ H+ HTG+ P
Sbjct: 9 RVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 34.9 bits (81), Expect = 0.004
Identities = 8/33 (24%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 579 KNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
+ +G + C C + F++ +L H++ IH
Sbjct: 2 SSGSSGQRVYECQECGKSFRQKGSLTLHER-IH 33
Score = 33.3 bits (77), Expect = 0.014
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 818 RVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+G+R + C CGK+ K + H + H
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIH 33
Score = 32.5 bits (75), Expect = 0.030
Identities = 13/30 (43%), Positives = 14/30 (46%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPY 560
C C K+F K SLTLH R H P
Sbjct: 10 VYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 30.6 bits (70), Expect = 0.15
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 710 KPFSCTVCKKSFYTKWNLGLHQWTH 734
+ + C C KSF K +L LH+ H
Sbjct: 9 RVYECQECGKSFRQKGSLTLHERIH 33
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 44.9 bits (107), Expect = 1e-06
Identities = 10/42 (23%), Positives = 15/42 (35%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCN 591
+ K + CD C K+F L H+ H G +
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 43.7 bits (104), Expect = 3e-06
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K ++C CGK F L H RVH GE+
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 40.3 bits (95), Expect = 6e-05
Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 5/50 (10%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRG 750
S K +C C K+F L +HQ R+HM KC + G
Sbjct: 2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQ-----RVHMGEKCSGPSSG 46
Score = 37.6 bits (88), Expect = 5e-04
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+GE+ +C CGK S H + H
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35
Score = 34.5 bits (80), Expect = 0.006
Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ +G C+ C ++F S L H++ +H
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQR-VH 35
Score = 33.3 bits (77), Expect = 0.018
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCD 563
C C K F +L +H R H+ K
Sbjct: 12 SHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 27.2 bits (61), Expect = 2.5
Identities = 8/37 (21%), Positives = 11/37 (29%), Gaps = 2/37 (5%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSH 764
G + C C + F S + H R H
Sbjct: 1 GSSGSSGSGEK--SHTCDECGKNFCYISALRIHQRVH 35
Score = 26.0 bits (58), Expect = 6.3
Identities = 7/31 (22%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 637 HQETHATV-PKQCTYCTEKFTHTSSLTRHIR 666
+ + C C + F + S+L H R
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQR 33
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 47
Score = 44.1 bits (105), Expect = 2e-06
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDH-KNTHTGNAPFPCN 591
+ KPY+C C K+F+ L H + HTG P +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 44.1 bits (105), Expect = 2e-06
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVR-VHNGERPFSC 828
KK Y C CGK F ++ L H R H GE+P
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 41.4 bits (98), Expect = 3e-05
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
++ TG P+ C C + F + ++L +H + H
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36
Score = 37.2 bits (87), Expect = 6e-04
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTHH 849
+ G++P+ C CGK ++ +H + +H
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36
Score = 36.8 bits (86), Expect = 9e-04
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVRE-HELKKKYSCT 801
+ S +P+ C CG+ FI+ + IRH R H +K +
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 33.3 bits (77), Expect = 0.016
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQ 731
S KP+ C C K+F +L H
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHW 32
Score = 32.2 bits (74), Expect = 0.041
Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMR-THLKIKPYKC 562
P C C K F SL H R H KP
Sbjct: 12 PYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 30.2 bits (69), Expect = 0.21
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 637 HQETH-ATVPKQCTYCTEKFTHTSSLTRHIRKNH 669
+ P +C C + F +SL RH R H
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36
Score = 27.5 bits (62), Expect = 1.7
Identities = 9/47 (19%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRS-HRNIRPFTCN 773
G + + P++C C + F ++ H R H +P +
Sbjct: 1 GSSGSSGTGKK--PYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 43.5 bits (103), Expect = 3e-06
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 792 HELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSC 828
+K YSC C +TF + L H ++H + S
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 37.7 bits (88), Expect = 4e-04
Identities = 10/39 (25%), Positives = 15/39 (38%)
Query: 552 RTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPC 590
KPY C C ++F +L H+ HT +
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 36.5 bits (85), Expect = 0.001
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 579 KNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
+ +G P+ C C F + L QH+K +H
Sbjct: 2 SSGSSGEKPYSCAECKETFSDNNRLVQHQK-MH 33
Score = 35.8 bits (83), Expect = 0.002
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 818 RVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+GE+P+SC C +T + + +H K H
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMH 33
Score = 32.7 bits (75), Expect = 0.028
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 704 RIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
KP+SC CK++F L HQ H
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMH 33
Score = 31.5 bits (72), Expect = 0.072
Identities = 8/39 (20%), Positives = 15/39 (38%)
Query: 762 RSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSC 800
+P++C C F ++H + H +K S
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 28.1 bits (63), Expect = 1.1
Identities = 8/32 (25%), Positives = 10/32 (31%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKC 562
P C C +TF L H + H
Sbjct: 10 PYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 25.7 bits (57), Expect = 7.0
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 645 PKQCTYCTEKFTHTSSLTRHIR 666
P C C E F+ + L +H +
Sbjct: 10 PYSCAECKETFSDNNRLVQHQK 31
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger,
transcription factor, DNA binding protein; NMR {Mus
musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Length = 37
Score = 41.9 bits (99), Expect = 1e-05
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 788 HVREHELKKKYSCTICGKTFHRSYYLTAHVRVH 820
R K + C C ++F RS +L H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 41.2 bits (97), Expect = 2e-05
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 816 HVRVHNGERPFSCHICGKTSTTKSNH-NKHVKTH 848
R G +PF C C + S ++S+H H K H
Sbjct: 2 STRGSTGIKPFQCPDCDR-SFSRSDHLALHRKRH 34
Score = 40.8 bits (96), Expect = 3e-05
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTH 582
R IKP++C CD+SF + L+ H+ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 40.0 bits (94), Expect = 6e-05
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHL 612
TG PF C CDR F R +LA H+K H+
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR-HM 35
Score = 38.5 bits (90), Expect = 2e-04
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 760 HLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHEL 794
R I+PF C C R F R + H + H L
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 38.5 bits (90), Expect = 2e-04
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 702 HMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHV 735
R KPF C C +SF +L LH+ H+
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 35.0 bits (81), Expect = 0.003
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKI 557
P CP C ++F L LH + H+ +
Sbjct: 11 PFQCPDCDRSFSRSDHLALHRKRHMLV 37
Score = 30.4 bits (69), Expect = 0.14
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSH 764
PF+C C+R F S H + H
Sbjct: 11 PFQCPDCDRSFSRSDHLALHRKRH 34
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 44
Score = 40.6 bits (95), Expect = 5e-05
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKK 615
++ G PF C+ CDR F + + L QH++ H +K
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHER-THARKS 39
Score = 39.8 bits (93), Expect = 7e-05
Identities = 8/39 (20%), Positives = 14/39 (35%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERP 825
+ + C+ C + F + YL H R H +
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 39.8 bits (93), Expect = 8e-05
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTG 584
+ P+KC CD+ F L H+ TH
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 34.8 bits (80), Expect = 0.005
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 815 AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+ GE PF C C + T ++ +H +TH
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 33.3 bits (76), Expect = 0.017
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREH 792
+ S PF C+ C R F ++ ++H R H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 32.5 bits (74), Expect = 0.027
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 701 SHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTH 734
S PF C+ C + F + L H+ TH
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 29.1 bits (65), Expect = 0.59
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Query: 728 GLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSH 764
G + PFKC C+R F + H R+H
Sbjct: 1 GSSGSSGAGEN--PFKCSKCDRVFTQRNYLVQHERTH 35
Score = 26.4 bits (58), Expect = 4.4
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTH 554
P C C + F + L H RTH
Sbjct: 12 PFKCSKCDRVFTQRNYLVQHERTH 35
Score = 26.0 bits (57), Expect = 6.3
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 637 HQETHA-TVPKQCTYCTEKFTHTSSLTRHIR 666
+ A P +C+ C FT + L +H R
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHER 33
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding
protein; NMR {Homo sapiens}
Length = 37
Score = 40.0 bits (94), Expect = 6e-05
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Query: 795 KKKYSCTI--CGKTFHRSYYLTAHVRVHNGER 824
KK++ C I CGK + ++ +L AH+R H GER
Sbjct: 6 KKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 28.5 bits (64), Expect = 0.73
Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Query: 556 KIKPYKCDV--CDKSFVTAQKLSDHKNTHTG 584
K K + C + C K + L H HTG
Sbjct: 5 KKKQHICHIQGCGKVYGKTSHLRAHLRWHTG 35
Score = 26.2 bits (58), Expect = 4.7
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 821 NGERPFSCHI--CGKTSTTKSNHNKHVKTH 848
++ CHI CGK S+ H++ H
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWH 33
Score = 25.8 bits (57), Expect = 7.1
Identities = 8/26 (30%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 741 PFKC--KSCNRGFYSSSEYQAHLRSH 764
C + C + + +S +AHLR H
Sbjct: 8 QHICHIQGCGKVYGKTSHLRAHLRWH 33
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription;
NMR {Mus musculus} SCOP: g.37.1.1
Length = 35
Score = 38.6 bits (89), Expect = 2e-04
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 820 HNGERPFSCHICGKTSTTKSNHNKHVKTH 848
+G+RPF C IC TTK+N +H+K H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 32.4 bits (73), Expect = 0.031
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 764 HRNIRPFTCNYCGRKFIRKFNCIRHVREH 792
RPF C C F K NC RH++ H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 25.9 bits (56), Expect = 7.1
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 706 HDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRM 738
+PF C +C +F TK N H H +
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL 34
Score = 25.5 bits (55), Expect = 7.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 582 HTGNAPFPCNMCDRHFKRYSNLAQHKKV 609
+G PF C +C F +N A+H KV
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKV 29
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A
1are_A
Length = 29
Score = 38.1 bits (89), Expect = 2e-04
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 796 KKYSCTICGKTFHRSYYLTAHVRVHNGER 824
+ + C +C + F R +L H R H E+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 35.0 bits (81), Expect = 0.003
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 768 RPFTCNYCGRKFIRKFNCIRHVREH 792
R F C C R F R+ + RH R H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH 25
Score = 31.5 bits (72), Expect = 0.049
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 558 KPYKCDVCDKSFVTAQKLSDHKNTHTG 584
+ + C+VC ++F + L H +HT
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 30.7 bits (70), Expect = 0.083
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSH 764
F C+ C R F + H RSH
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSH 25
Score = 28.4 bits (64), Expect = 0.53
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIK 558
C VC++ F + L H R+H K
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 28.1 bits (63), Expect = 0.90
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 587 PFPCNMCDRHFKRYSNLAQHKKVIHLKKK 615
F C +C R F R +L +H + H +K
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYR-SHTNEK 29
Score = 26.5 bits (59), Expect = 3.2
Identities = 8/22 (36%), Positives = 8/22 (36%)
Query: 645 PKQCTYCTEKFTHTSSLTRHIR 666
C CT F L RH R
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYR 23
Score = 26.1 bits (58), Expect = 3.7
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 710 KPFSCTVCKKSFYTKWNLGLHQWTH 734
+ F C VC ++F + +L H +H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH 25
Score = 25.7 bits (57), Expect = 6.1
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 824 RPFSCHICGKTSTTKSNHNKHVKTH 848
R F C +C + + + +H ++H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH 25
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 96
Score = 40.2 bits (93), Expect = 2e-04
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 790 REHELKKKYSCTICGKTFHRSYY-LTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
E K SC C ++ L H+ + F+CH CGK + + HV +
Sbjct: 27 LEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMAN 85
Query: 849 HARETINTEG 858
H
Sbjct: 86 HNSLPSGPSS 95
Score = 33.7 bits (76), Expect = 0.046
Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 503 KNKQRRCDTCSEVFDK-LKDYQEHIKNVH--PLPCPVCSKTFPSKPSLTLHMRTHLKIKP 559
C TC V K ++ ++H++N C C K S + H+ + P
Sbjct: 31 DKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP 90
Score = 30.6 bits (68), Expect = 0.51
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 409 LDIAKKKKHACIYCKKTFTGWKLRKYHMKAEHPELFNEPET 449
++ K++ C +C K KYH+ A H L + P +
Sbjct: 55 MENCKQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGPSS 95
Score = 30.2 bits (67), Expect = 0.69
Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Query: 731 QWTHVSRMHMPFKCKSCNRGFYSS-SEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHV 789
QW C +C + + H+ + + FTC++CG++ HV
Sbjct: 24 QWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQ-EMFTCHHCGKQLRSLAGMKYHV 82
Query: 790 RE 791
Sbjct: 83 MA 84
Score = 27.9 bits (61), Expect = 4.9
Identities = 8/50 (16%), Positives = 17/50 (34%)
Query: 628 FQSRGKLLWHQETHATVPKQCTYCTEKFTHTSSLTRHIRKNHDPRYLPVD 677
++ L H E C +C ++ + + H+ NH+
Sbjct: 45 RKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGPS 94
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 98
Score = 39.5 bits (91), Expect = 4e-04
Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Query: 790 REHELKKKYSCTICGKTFHRSYY-LTAHVRV-HNGERPFSCHICGKTSTTKSNHNKHVKT 847
R + + C C ++ L H+ V + C C K +K+ N H
Sbjct: 17 RAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMA 76
Query: 848 HHARETINTEG 858
H+ + + E
Sbjct: 77 EHSAKPSDAEA 87
Score = 34.2 bits (77), Expect = 0.032
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Query: 685 VNCDICKIVVLKST--LKSHMRI-HDNAKPFSCTVCKKSFYTKWNLGLH 730
C C +V K+ LK HM + C C+K F +K L H
Sbjct: 25 AVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYH 73
Score = 33.0 bits (74), Expect = 0.078
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
Query: 503 KNKQRRCDTCSEVFDK-LKDYQEHIKNVH----PLPCPVCSKTFPSKPSLTLHMRTHLKI 557
+ + C TC+ V K L ++H++ L C C K F SK L H
Sbjct: 21 ERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA 80
Query: 558 KP 559
KP
Sbjct: 81 KP 82
Score = 30.3 bits (67), Expect = 0.67
Identities = 14/70 (20%), Positives = 22/70 (31%), Gaps = 3/70 (4%)
Query: 731 QWTHVSRMHMPFKCKSCNRGFYSS-SEYQAHLRS-HRNIRPFTCNYCGRKFIRKFNCIRH 788
QW C +CN + + H+ + C +C ++F K H
Sbjct: 14 QWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYH 73
Query: 789 VR-EHELKKK 797
EH K
Sbjct: 74 TMAEHSAKPS 83
Score = 28.0 bits (61), Expect = 4.7
Identities = 17/70 (24%), Positives = 22/70 (31%), Gaps = 2/70 (2%)
Query: 522 YQEHIKNVHPLPCPVCSK-TFPSKPSLTLHMRT-HLKIKPYKCDVCDKSFVTAQKLSDHK 579
+Q I CP C+ T + L HM KC C K F + L+ H
Sbjct: 15 WQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHT 74
Query: 580 NTHTGNAPFP 589
P
Sbjct: 75 MAEHSAKPSD 84
Score = 27.2 bits (59), Expect = 7.3
Identities = 13/64 (20%), Positives = 18/64 (28%), Gaps = 2/64 (3%)
Query: 558 KPYKCDVCDKSFV-TAQKLSDH-KNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKK 615
C C+ T L H + C C + FK + L H H K
Sbjct: 23 GEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
Query: 616 KIKD 619
+
Sbjct: 83 SDAE 86
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens}
SCOP: g.37.1.1 PDB: 1va2_A
Length = 31
Score = 37.2 bits (87), Expect = 5e-04
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 796 KKYSCTI--CGKTFHRSYYLTAHVRVHNGER 824
+ + CT CGK F RS L H R H GE+
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 33.7 bits (78), Expect = 0.008
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 768 RPFTCNY--CGRKFIRKFNCIRHVREH 792
RPF C + CG++F R RH R H
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTH 27
Score = 33.7 bits (78), Expect = 0.009
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 558 KPYKCDV--CDKSFVTAQKLSDHKNTHTG 584
+P+ C C K F + +L HK THTG
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG 29
Score = 29.1 bits (66), Expect = 0.36
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 741 PFKC--KSCNRGFYSSSEYQAHLRSHRNIR 768
PF C C + F S E Q H R+H +
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 26.0 bits (58), Expect = 4.6
Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Query: 645 PKQCTY--CTEKFTHTSSLTRHIRK 667
P CT+ C ++FT + L RH R
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRT 26
Score = 25.3 bits (56), Expect = 7.5
Identities = 11/30 (36%), Positives = 11/30 (36%), Gaps = 2/30 (6%)
Query: 531 PLPCPV--CSKTFPSKPSLTLHMRTHLKIK 558
P C C K F L H RTH K
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers,
4-stranded parallel/anti-parallel beta- sheet,
structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1
Length = 102
Score = 39.4 bits (91), Expect = 5e-04
Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
Query: 550 HMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNT-HTG---NAPFPCNMCDRHFKRYSNLAQ 605
+ + Y+C C + H ++ H N+ + C C+ KRY L++
Sbjct: 9 NQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSE 68
Query: 606 HKKVIH 611
H H
Sbjct: 69 HNLKYH 74
Score = 37.4 bits (86), Expect = 0.002
Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 5/91 (5%)
Query: 753 SSSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVR-EH---ELKKKYSCTICGKTFH 808
+ + + ++ + + C YC + HV EH L Y C C
Sbjct: 2 AHHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTK 61
Query: 809 RSYYLTAHV-RVHNGERPFSCHICGKTSTTK 838
R L+ H + H GE F + + + T
Sbjct: 62 RYDALSEHNLKYHPGEENFKLTMVKRNNQTI 92
Score = 37.1 bits (85), Expect = 0.003
Identities = 18/78 (23%), Positives = 26/78 (33%), Gaps = 5/78 (6%)
Query: 523 QEHIKNVHPLPCPVCSKTFPSKPSLTLHMRTH----LKIKPYKCDVCDKSFVTAQKLSDH 578
Q++ K C C+ P T H+ + + Y C C+ LS+H
Sbjct: 10 QQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEH 69
Query: 579 -KNTHTGNAPFPCNMCDR 595
H G F M R
Sbjct: 70 NLKYHPGEENFKLTMVKR 87
Score = 35.9 bits (82), Expect = 0.008
Identities = 12/72 (16%), Positives = 22/72 (30%), Gaps = 4/72 (5%)
Query: 786 IRHVREHELKKKYSCTICGKTFHRSYYLTAHVR-VHNGER---PFSCHICGKTSTTKSNH 841
+ + +++ Y C C T HV H + C C +
Sbjct: 7 HHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDAL 66
Query: 842 NKHVKTHHARET 853
++H +H E
Sbjct: 67 SEHNLKYHPGEE 78
Score = 30.9 bits (69), Expect = 0.43
Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 4/64 (6%)
Query: 734 HVSRMHMPFKCKSCNRGFYSSSEYQAHLRS-HRNIR---PFTCNYCGRKFIRKFNCIRHV 789
++ ++CK C + + H+ S H N+ + C C R H
Sbjct: 11 QNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHN 70
Query: 790 REHE 793
++
Sbjct: 71 LKYH 74
Score = 27.0 bits (59), Expect = 8.9
Identities = 8/65 (12%), Positives = 16/65 (24%), Gaps = 1/65 (1%)
Query: 578 HKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYC-HCGEIFQSRGKLLW 636
++ + C C + H H + C C + + L
Sbjct: 9 NQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSE 68
Query: 637 HQETH 641
H +
Sbjct: 69 HNLKY 73
>1fgj_A Hydroxylamine oxidoreductase; nitrification; HET: HEM HEC; 2.80A
{Nitrosomonas europaea} SCOP: a.138.1.3
Length = 546
Score = 41.3 bits (95), Expect = 0.001
Identities = 33/230 (14%), Positives = 61/230 (26%), Gaps = 14/230 (6%)
Query: 636 WHQETHATVPKQCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDENVNCDICKIVVL 695
W + THA + K ++ + +N+ + K+T + V C C + V
Sbjct: 94 WKRSTHANLDKIRNLKSDDPLYYKKGKLEEVENNLRSMGKLGEKETLKEVGCIDCHVDVN 153
Query: 696 KSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSS 755
K H + +C C + + P S + ++
Sbjct: 154 KKDKADHTKDIRMPTADTCGTCHLREFAERESERDTMVW-PNGQWPAGRPSHALDYTANI 212
Query: 756 EYQAHLRSHRNIRPFTCNYCGRKFIRKFNC-IRHVREH-ELKKKYSCTICGKTFHRSYYL 813
E + C C + NC RH E +K +C C + +
Sbjct: 213 ETTVWATMPQREVAEGCTMCHTNQNKCDNCHTRHEFSAAESRKPEACATCHSGVDHNNWE 272
Query: 814 TAHVRVH-----------NGERPFSCHICGKTSTTKSNHNKHVKTHHARE 852
+ H N E + H++
Sbjct: 273 AYTMSKHGKLAEMNRDKWNWEVRLKDAFSKGGQNAPTCAACHMEYEGEYT 322
>3ov0_A Cytochrome C family protein; multiheme cytochrome C, electron
transfer, Fe reduction, GEO sulfurreducens; HET: HEM;
3.20A {Geobacter sulfurreducens}
Length = 318
Score = 40.4 bits (92), Expect = 0.002
Identities = 36/271 (13%), Positives = 67/271 (24%), Gaps = 24/271 (8%)
Query: 577 DHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLLW 636
H H C +C H + L+K K ++ + +
Sbjct: 19 SHD-IHLKKYNNNCRIC------------HIALFDLRKPKRYTM----LDMEKGKSCGAC 61
Query: 637 HQETHATVPKQCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDENVNCDICKIVVLK 696
H A + C + ++ + K + C C +
Sbjct: 62 HTGMKAFSVADDSQCVRCHSGSARPVAYRMKGAGEAVFSHEVHVPMLEGKCRTC-HSNRE 120
Query: 697 STLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSE 756
T ++ + K SC C G H ++
Sbjct: 121 ITGGRNVTMAQMEKGKSCGACHNDKMAFTVAGNCGKCHKGMTPPKTVNFKMKGVADAAFS 180
Query: 757 YQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAH 816
++ HL + CN C K + ++ K SC C +
Sbjct: 181 HEFHLGMY------KCNECHTKLFAYKAGAKRFTMADMDKGKSCGACHNGKDAFSSASDC 234
Query: 817 VRVHNGERPFSCHICGKTSTTKSNHNKHVKT 847
+ H G +P +H+ H+
Sbjct: 235 GKCHPGLKPAKLTYKTSVGEAYFDHDIHLSM 265
Score = 32.7 bits (72), Expect = 0.52
Identities = 38/292 (13%), Positives = 77/292 (26%), Gaps = 25/292 (8%)
Query: 552 RTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIH 611
HLK C +C + +K + C C K +S + V
Sbjct: 21 DIHLKKYNNNCRICHIALFDLRKPKRYT-MLDMEKGKSCGACHTGMKAFSVADDSQCVRC 79
Query: 612 LKKKKIKDFYCHCGEIFQSRGKLLWHQETHATVPKQCTYCTEKFTHTSSLTRHIRKNHDP 671
Y G + H+ + +C C T + +
Sbjct: 80 HSGSARPVAYRMKGA----GEAVFSHEVHVPMLEGKCRTCHSNREITGGRNVTMAQMEKG 135
Query: 672 RY------------LPVDRKKTDENVNCDICKIVVLKSTLKSHMRIHDNAKPFSCTVCKK 719
+ + + K + + +K + + + C C
Sbjct: 136 KSCGACHNDKMAFTVAGNCGKCHKGMTPPKTVNFKMKGVADAAFSHEFHLGMYKCNECHT 195
Query: 720 SFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGRKF 779
+ ++ M C +C+ G + S + H ++P Y
Sbjct: 196 KLFAYKAGAKR--FTMADMDKGKSCGACHNGKDAFSSASDCGKCHPGLKPAKLTYKTSVG 253
Query: 780 IRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHIC 831
F+ H+ + C C + +A + + E+ SC +C
Sbjct: 254 EAYFDHDIHL------SMFKCADCHTKVFKYRKGSAPATMADMEKGKSCGVC 299
Score = 30.0 bits (65), Expect = 3.6
Identities = 31/239 (12%), Positives = 56/239 (23%), Gaps = 22/239 (9%)
Query: 610 IHLKKKKIKDFYCHCGEIFQSRGKLLWHQETHATVPKQCTYCTEKFTHTSSLTRHIRKNH 669
IHLKK CH + K + K C C H
Sbjct: 22 IHLKKYNNNCRICHIALFDLRKPK--RYTMLDMEKGKSCGAC------------HTGMKA 67
Query: 670 DPRYLPVDRKKTDENVNCDICKIVVLKSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGL 729
+ + + +H C C +
Sbjct: 68 FSVADDSQCVRCHSGSARPVAYRMKGAGEAVFSHEVHVPMLEGKCRTCHSNREITG---- 123
Query: 730 HQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHV 789
+ +++M C +C+ + + + H+ + P K +
Sbjct: 124 GRNVTMAQMEKGKSCGACHNDKMAFTVAGNCGKCHKGMTP--PKTVNFKMKGVADAAFSH 181
Query: 790 REHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTH 848
H Y C C + + ++ SC C S+ + K H
Sbjct: 182 EFHL--GMYKCNECHTKLFAYKAGAKRFTMADMDKGKSCGACHNGKDAFSSASDCGKCH 238
>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase,
methyltransferase, guanylyltransferase, zinc finger,
icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1
PDB: 2cse_V
Length = 1275
Score = 40.6 bits (94), Expect = 0.002
Identities = 10/52 (19%), Positives = 14/52 (26%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTH 582
S P+ T Y+C VC + L H +H
Sbjct: 152 TRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 34.8 bits (79), Expect = 0.13
Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 8/52 (15%)
Query: 796 KKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKT 847
Y C +C L AHV H + G + T S +H+
Sbjct: 179 HGYQCHVCSAVLFSPLDLDAHVASH--------GLHGNMTLTSSEIQRHITE 222
Score = 34.8 bits (79), Expect = 0.15
Identities = 8/45 (17%), Positives = 14/45 (31%)
Query: 691 KIVVLKSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHV 735
IV + + C VC ++ +L H +H
Sbjct: 160 AIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHG 204
Score = 32.5 bits (73), Expect = 0.82
Identities = 16/179 (8%), Positives = 40/179 (22%), Gaps = 6/179 (3%)
Query: 439 EHPELFNEPETIKLLSKTQASTSTVISEPSTSFVSQAVCPIKFENSNSFGTQIQEFLPPS 498
+ P T + + + S +++ N +
Sbjct: 32 DKQNNKAGPATTEPGTSNREQYRARPGIASVQRATESAELPMKNNDEGTPDKKGNTRGDL 91
Query: 499 LTSIKNKQRRCDTCSEVFDKLKDYQEHIKNVHPLPCPVCSKTFPSKPSLTLHMRTHLKIK 558
+ + + + + + KD + V + + S + K
Sbjct: 92 VNE--HSEAKDEADEATQKQAKDTDKSKAQVTYSDTGINNAN-ELSRSGNVDNEGGSNQK 148
Query: 559 PYK---CDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKK 614
P + T + + C++C +L H L
Sbjct: 149 PMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHG 207
Score = 31.7 bits (71), Expect = 1.2
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 742 FKCKSCNRGFYSSSEYQAHLRSHR 765
++C C+ +S + AH+ SH
Sbjct: 181 YQCHVCSAVLFSPLDLDAHVASHG 204
Score = 31.4 bits (70), Expect = 1.7
Identities = 6/60 (10%), Positives = 15/60 (25%)
Query: 790 REHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTHH 849
+ + + + CH+C + + + HV +H
Sbjct: 145 SNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHG 204
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif,
transcription regulation, zinc-finger; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 47
Score = 34.1 bits (78), Expect = 0.008
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 796 KKYSCTI--CGKTFHRSYYLTAHVRVHNGER 824
K + C C KTF R Y + +H++ H +R
Sbjct: 17 KTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 30.2 bits (68), Expect = 0.22
Identities = 8/27 (29%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 768 RPFTCNY--CGRKFIRKFNCIRHVREH 792
+ F C + C + F R++N H++ H
Sbjct: 17 KTFECLFPGCTKTFKRRYNIRSHIQTH 43
Score = 26.4 bits (58), Expect = 4.9
Identities = 9/22 (40%), Positives = 16/22 (72%)
Query: 535 PVCSKTFPSKPSLTLHMRTHLK 556
P C+KTF + ++ H++THL+
Sbjct: 24 PGCTKTFKRRYNIRSHIQTHLE 45
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA
motif, metal binding protein; NMR {Synthetic} SCOP:
g.37.1.3 PDB: 2l1o_A
Length = 39
Score = 33.6 bits (77), Expect = 0.012
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 558 KPYKCDVCDKSFVTAQKLSDHKNTH 582
+ Y C C + F +AQ L H N H
Sbjct: 5 RSYTCSFCKREFRSAQALGGHMNVH 29
Score = 30.9 bits (70), Expect = 0.12
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 796 KKYSCTICGKTFHRSYYLTAHVRVHNGER 824
+ Y+C+ C + F + L H+ VH +R
Sbjct: 5 RSYTCSFCKREFRSAQALGGHMNVHRRDR 33
Score = 30.5 bits (69), Expect = 0.15
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 710 KPFSCTVCKKSFYTKWNLGLHQWTH 734
+ ++C+ CK+ F + LG H H
Sbjct: 5 RSYTCSFCKREFRSAQALGGHMNVH 29
Score = 28.6 bits (64), Expect = 0.73
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 742 FKCKSCNRGFYSSSEYQAHLRSHRNIR 768
+ C C R F S+ H+ HR R
Sbjct: 7 YTCSFCKREFRSAQALGGHMNVHRRDR 33
Score = 27.0 bits (60), Expect = 2.2
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 768 RPFTCNYCGRKF 779
R +TC++C R+F
Sbjct: 5 RSYTCSFCKREF 16
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 29
Score = 32.8 bits (74), Expect = 0.020
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 800 CTICGKTFHRSYYLTAHVRVHNGER 824
C +CGK F ++ L AHVR H GE+
Sbjct: 5 CVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 27.0 bits (59), Expect = 2.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 558 KPYKCDVCDKSFVTAQKLSDHKNTHTG 584
KP +C +C K+F A L H HTG
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTG 27
Score = 26.7 bits (58), Expect = 2.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 645 PKQCTYCTEKFTHTSSLTRHIRKN 668
P QC C + FT SSL H+R++
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQH 25
Score = 26.7 bits (58), Expect = 3.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 768 RPFTCNYCGRKFIRKFNCIRHVREHELKK 796
+P C CG+ F + + I HVR+H +K
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 33.3 bits (75), Expect = 0.021
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 792 HELKKKYSCTICGKTFHRSYYLTAHVRVH 820
+ +K + C C KTF S YLT H R+H
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIH 35
Score = 31.3 bits (70), Expect = 0.081
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 553 THLKIKPYKCDVCDKSFVTAQKLSDHKNTHT 583
+ K K +KC+ C+K+F ++ L+ H+ HT
Sbjct: 6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 28.3 bits (62), Expect = 1.1
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 581 THTGNAPFPCNMCDRHFKRYSNLAQHKKV 609
+ F CN C++ F L QH+++
Sbjct: 6 SGQKEKCFKCNKCEKTFSCSKYLTQHERI 34
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1
Length = 33
Score = 32.6 bits (74), Expect = 0.022
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 797 KYSCTICGKTFHRSYYLTAHVRVHNGERP 825
K++C C K F RS +L+ H+ +H
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLGE 30
Score = 29.1 bits (65), Expect = 0.44
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 770 FTCNYCGRKFIRKFNCIRHVREHELKKK 797
F C C ++F+R + +H+ HEL +
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGE 30
Score = 28.7 bits (64), Expect = 0.62
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 534 CPVCSKTFPSKPSLTLHMRTHLKIKPYK 561
CP C K F L+ H+ H + +
Sbjct: 5 CPECPKRFMRSDHLSKHITLHELLGEER 32
Score = 28.3 bits (63), Expect = 0.81
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 588 FPCNMCDRHFKRYSNLAQHKKVIHLKKKKIK 618
F C C + F R +L++H +H + +
Sbjct: 3 FACPECPKRFMRSDHLSKHIT-LHELLGEER 32
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein,
helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis}
SCOP: g.37.1.4 g.37.1.4
Length = 127
Score = 34.9 bits (79), Expect = 0.027
Identities = 21/104 (20%), Positives = 36/104 (34%), Gaps = 10/104 (9%)
Query: 523 QEHIKNVHPLPCPVCSKTFPSKPSLTLHM--RTHL-KIKPYKCDVCDKSFVTAQKLSDHK 579
+E+ C VCS S+ H R H K++ Y + V A+K
Sbjct: 24 RENSHIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP 83
Query: 580 NTHTG--NAPFPCNMCDRHFKRYSNLAQH---KKVIHLKKKKIK 618
+ + C +C+ F H K H+K +++
Sbjct: 84 AEISDGEDRSKCCPVCNMTFSSPVVAESHYIGKT--HIKNLRLR 125
Score = 30.3 bits (67), Expect = 1.1
Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 5/81 (6%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSH---RNIRPFTCNYCGRKFIRKFNCIRHVREHE--LK 795
+CK C+ S S+ AH +S +R + G + E
Sbjct: 32 DTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGED 91
Query: 796 KKYSCTICGKTFHRSYYLTAH 816
+ C +C TF +H
Sbjct: 92 RSKCCPVCNMTFSSPVVAESH 112
Score = 28.0 bits (61), Expect = 7.3
Identities = 15/104 (14%), Positives = 29/104 (27%), Gaps = 4/104 (3%)
Query: 669 HDPRYLPVDRKKTDENVNCDICKIVVL-KSTLKSHM--RIHD-NAKPFSCTVCKKSFYTK 724
L + + C +C V++ +S +H R H + + +
Sbjct: 17 DAVNSLIRENSHIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPA 76
Query: 725 WNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIR 768
C CN F S ++H +I+
Sbjct: 77 KKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAESHYIGKTHIK 120
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Length = 29
Score = 32.2 bits (73), Expect = 0.032
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 797 KYSCTICGKTFHRSYYLTAHVRVHNGER 824
K++C C K F RS +LT H+ +H ++
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 28.3 bits (63), Expect = 0.64
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 770 FTCNYCGRKFIRKFNCIRHVREHELKK 796
F C C ++F+R + H+ HE KK
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENKK 29
Score = 27.9 bits (62), Expect = 0.85
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 534 CPVCSKTFPSKPSLTLHMRTHLKIK 558
CP C K F LTLH+ H K
Sbjct: 5 CPECPKRFMRSDHLTLHILLHENKK 29
Score = 27.6 bits (61), Expect = 1.4
Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 588 FPCNMCDRHFKRYSNLAQHKKVIHLKKK 615
F C C + F R +L H +H KK
Sbjct: 3 FACPECPKRFMRSDHLTLHIL-LHENKK 29
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding
protein 1; B-tandem zipper, protein binding; 1.30A {Mus
musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB:
2dfy_X 2xjz_I 2xjy_B
Length = 188
Score = 35.4 bits (81), Expect = 0.034
Identities = 16/110 (14%), Positives = 32/110 (29%), Gaps = 19/110 (17%)
Query: 712 FSCTVCKK-------SFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSH 764
C+ C+ S YTK + L + ++ C +C + +S +
Sbjct: 33 LKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGNSGACSACGQSIPASELVMRAQGNV 92
Query: 765 RNIRPFTCNYCGRKFI---------RKFNCIRHVREHELKKKYSCTICGK 805
+++ FTC+ C + + C G
Sbjct: 93 YHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHD---RPTALINGHLNSGG 139
>3ucp_A UNDA; beta-barrel, C-type cytochrome, electron transport, C-type H
cell surface, transport protein; HET: HEC; 1.76A
{Shewanella SP} PDB: 3ufh_A* 3ufk_A*
Length = 874
Score = 36.6 bits (82), Expect = 0.037
Identities = 33/286 (11%), Positives = 68/286 (23%), Gaps = 17/286 (5%)
Query: 576 SDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFYCHCGEIFQSRGKLL 635
S K+ TG+ M K + + + + G GK +
Sbjct: 290 SYSKDPETGSPLDMGAMVHAIHKGTYAMVGYSGTAYDFSGTMAKAAAESGYPQYREGKDV 349
Query: 636 WHQETHATVPKQCTYCTEKFTHTSSLTRHIRKNHDPRYLPVDRKKTDENVNCDIC-KIVV 694
+ T C C H+ D + K + + C C
Sbjct: 350 SERVTLPVSIGNCQSC-----HS---------TDDKGPVDAASFKHHKGLACASCHMSGF 395
Query: 695 LKSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSS 754
+ + K +Y + ++ + C SC+
Sbjct: 396 NPVDNSEWLTPPEGQKDRGFVGNYFHYYATPEIDGIPGVNLVHVFQNGGCASCHAEQGEE 455
Query: 755 SEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLT 814
+ HL + Y + F+ + + + ++++
Sbjct: 456 GSAKYHLAKANATKLLRTEYAYKLENGTFDVAKGELTFTVNWHSDVAPHQDPKVKEFWVS 515
Query: 815 --AHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTHHARETINTEG 858
A P + S + + N +A T G
Sbjct: 516 LTAFNGTEYTMGPRPSNGTLGRSENRISVNLAKVETNANLTAVPNG 561
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 32
Score = 31.9 bits (72), Expect = 0.037
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 768 RPFTCNY--CGRKFIRKFNCIRHVREHELK 795
RP++C++ C + F+R + IRH + H+ K
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 30.4 bits (68), Expect = 0.14
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 558 KPYKCDV--CDKSFVTAQKLSDHKNTHTGNA 586
+PY CD CDK+FV L HK +H A
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA 32
Score = 26.1 bits (57), Expect = 4.1
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Query: 587 PFPCNM--CDRHFKRYSNLAQHKKVIHLKK 614
P+ C+ CD+ F R +L +HKK H +K
Sbjct: 3 PYSCDHPGCDKAFVRNHDLIRHKK-SHQEK 31
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 45
Score = 31.8 bits (71), Expect = 0.062
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 820 HNGERPFSCHICGKTSTTKSNHNKHVKTHH 849
+GE+P+SC +CG K + HV++H
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHD 34
Score = 31.8 bits (71), Expect = 0.067
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 792 HELKKKYSCTICGKTFHRSYYLTAHVRVHNG 822
+K YSC +CG F R ++ HVR H+G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 30.3 bits (67), Expect = 0.22
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 764 HRNIRPFTCNYCGRKFIRKFNCIRHVREHE 793
+P++C CG +F RK HVR H+
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHD 34
Score = 29.9 bits (66), Expect = 0.31
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 582 HTGNAPFPCNMCDRHFKRYSNLAQHKK 608
+G P+ C +C FKR ++ H +
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVR 31
Score = 29.5 bits (65), Expect = 0.37
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 554 HLKIKPYKCDVCDKSFVTAQKLSDHKNTHTG 584
KPY C VC F ++S H +H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 28.0 bits (61), Expect = 1.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTH 554
P CPVC F K ++ H+R+H
Sbjct: 10 PYSCPVCGLRFKRKDRMSYHVRSH 33
Score = 27.2 bits (59), Expect = 2.4
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 706 HDNAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMH 739
KP+SC VC F K + H +H +
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG 38
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 31.0 bits (69), Expect = 0.092
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 796 KKYSCTICGKTFHRSYYLTAHVRVHNGER 824
K ++C C K F + L AH+R+H E+
Sbjct: 8 KIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 27.9 bits (61), Expect = 1.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 534 CPVCSKTFPSKPSLTLHMRTHLKIK 558
C C+K F K SL H+R H K
Sbjct: 12 CEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 26.4 bits (57), Expect = 4.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 763 SHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKK 796
S + + FTC YC + F K + H+R H +K
Sbjct: 3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 30
Score = 30.6 bits (69), Expect = 0.10
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 768 RPFTCNYCGRKFIRKFNCIRHVR 790
+ + C C R F R+ IRH +
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQ 23
Score = 28.7 bits (64), Expect = 0.61
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 587 PFPCNMCDRHFKRYSNLAQHKKVIH 611
+ C +C+R F R L +H + IH
Sbjct: 2 AYACGLCNRAFTRRDLLIRHAQKIH 26
Score = 26.7 bits (59), Expect = 2.6
Identities = 9/25 (36%), Positives = 10/25 (40%)
Query: 645 PKQCTYCTEKFTHTSSLTRHIRKNH 669
C C FT L RH +K H
Sbjct: 2 AYACGLCNRAFTRRDLLIRHAQKIH 26
Score = 26.4 bits (58), Expect = 3.5
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 796 KKYSCTICGKTFHRSYYLTAHVR-VHNG 822
K Y+C +C + F R L H + +H+G
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 26.4 bits (58), Expect = 3.9
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 558 KPYKCDVCDKSFVTAQKLSDH-KNTHTGN 585
K Y C +C+++F L H + H+GN
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN 29
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA,
metal-binding, transcription; NMR {Mus musculus}
Length = 28
Score = 30.5 bits (68), Expect = 0.12
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 796 KKYSCTICGKTFHRSYYLTAHVRVHNG 822
+ YSC++CGK F + + H RVH G
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 29.0 bits (64), Expect = 0.36
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 557 IKPYKCDVCDKSFVTAQKLSDHKNTHTG 584
++PY C VC K F ++ H HTG
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 27.5 bits (60), Expect = 1.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 767 IRPFTCNYCGRKFIRKFNCIRHVREH 792
+RP++C+ CG++F K H R H
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVH 26
Score = 26.3 bits (57), Expect = 4.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 824 RPFSCHICGKTSTTKSNHNKHVKTH 848
RP+SC +CGK + K H + H
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVH 26
Score = 25.9 bits (56), Expect = 4.6
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 529 VHPLPCPVCSKTFPSKPSLTLHMRTH 554
+ P C VC K F K + H R H
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVH 26
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Length = 37
Score = 30.5 bits (68), Expect = 0.15
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 644 VPKQCTYCTEKFTHTSSLTRHIRKNHDPR 672
+ + C +C +K++ +L +HIR HDP+
Sbjct: 8 IKQHCRFCKKKYSDVKNLIKHIRDAHDPQ 36
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha,
coiled coil, cytoplasm, metal- binding, UBL conjugation,
UBL conjugation pathway; 2.20A {Homo sapiens}
Length = 170
Score = 33.1 bits (75), Expect = 0.20
Identities = 18/151 (11%), Positives = 36/151 (23%), Gaps = 18/151 (11%)
Query: 503 KNKQRRCDTCSEVFDKLKDYQEHIKNVHPLPCPVCSKTFPSKPSL-TLHMRTHLKIKPYK 561
R C C CPV ++ + + K
Sbjct: 35 PCGHRFCKACII----------KSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLMVK 84
Query: 562 CDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKKIKDFY 621
C + + H A C C R F++ ++ H +++
Sbjct: 85 CPNEGCLHKMELRHLEDHQAHCEFALMDCPQCQRPFQK-FHINIHILKDCPRRQ----VS 139
Query: 622 C-HCGEIFQSRGKLLWHQETHATVPKQCTYC 651
C +C + H + + +
Sbjct: 140 CDNCAASM-AFEDKEIHDQNCPLALEHHHHH 169
Score = 31.6 bits (71), Expect = 0.68
Identities = 17/105 (16%), Positives = 29/105 (27%), Gaps = 6/105 (5%)
Query: 708 NAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQA--HLRSHR 765
C V + L R + K N G E + ++H
Sbjct: 50 RDAGHKCPVDNEILLEN---QLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHC 106
Query: 766 NIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRS 810
C C R F + H+ + +++ SC C +
Sbjct: 107 EFALMDCPQCQRPFQKFHIN-IHILKDCPRRQVSCDNCAASMAFE 150
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 29.9 bits (66), Expect = 0.26
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 795 KKKYSCTICGKTFHRSYYLTAHVRVHNGE 823
K C CGK F S L H +H GE
Sbjct: 10 KTTSECQECGKIFRHSSLLIEHQALHAGE 38
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR
{Xenopus laevis} SCOP: g.37.1.1
Length = 27
Score = 29.3 bits (65), Expect = 0.34
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 560 YKCDVCDKSFVTAQKLSDHKNTH 582
YKC +C++SFV LS H+ H
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVH 24
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
classical zinc finger, transcription; NMR {Homo sapiens}
Length = 30
Score = 29.3 bits (65), Expect = 0.36
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 796 KKYSCTICGKTFHRSYYLTAHVRVHNGER 824
K Y C C + F L HVR+H GE+
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 29.0 bits (64), Expect = 0.44
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 557 IKPYKCDVCDKSFVTAQKLSDHKNTHTG 584
+KPY C C + F L H HTG
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVRIHTG 28
Score = 27.8 bits (61), Expect = 1.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 767 IRPFTCNYCGRKFIRKFNCIRHVREHELKK 796
++P+ C +C R+F RHVR H +K
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 25.9 bits (56), Expect = 5.1
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSH 764
P+ C C R F Q H+R H
Sbjct: 3 PYVCIHCQRQFADPGALQRHVRIH 26
Score = 25.9 bits (56), Expect = 6.2
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 645 PKQCTYCTEKFTHTSSLTRHIR 666
P C +C +F +L RH+R
Sbjct: 3 PYVCIHCQRQFADPGALQRHVR 24
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 29.0 bits (64), Expect = 0.56
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 558 KPYKCDVCDKSFVTAQKLSDHKNTHTG 584
KPYKC C + L+ H HTG
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTG 34
Score = 26.3 bits (57), Expect = 5.1
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 824 RPFSCHICGKTSTTKSNHNKHVKTH 848
+P+ C C S K+N N H++ H
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKH 32
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 26
Score = 28.5 bits (63), Expect = 0.57
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 768 RPFTCNYCGRKFIRKFNCIRHVREHE 793
+P+ C CG++F++ H+R H+
Sbjct: 1 KPYVCERCGKRFVQSSQLANHIRHHD 26
Score = 28.1 bits (62), Expect = 0.78
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 558 KPYKCDVCDKSFVTAQKLSDHKNTH 582
KPY C+ C K FV + +L++H H
Sbjct: 1 KPYVCERCGKRFVQSSQLANHIRHH 25
Score = 25.8 bits (56), Expect = 6.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 796 KKYSCTICGKTFHRSYYLTAHVRVHN 821
K Y C CGK F +S L H+R H+
Sbjct: 1 KPYVCERCGKRFVQSSQLANHIRHHD 26
>3ray_A PR domain-containing protein 11; structural genomics consortium,
SGC, histone methylation, Zn transcriptional regulation,
chromatin, transcription; 1.73A {Homo sapiens}
Length = 237
Score = 32.1 bits (72), Expect = 0.57
Identities = 16/94 (17%), Positives = 28/94 (29%), Gaps = 5/94 (5%)
Query: 759 AHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVR 818
+ +N+ F + R + R IR L+ YS K H T H
Sbjct: 147 SREEREQNLLAFQHS--ERIYFRACRDIRP--GEWLRVWYSEDY-MKRLHSMSQETIHRN 201
Query: 819 VHNGERPFSCHICGKTSTTKSNHNKHVKTHHARE 852
+ GE+ + + + R+
Sbjct: 202 LARGEKRLQREKSEQVLDNPEDLRGPIHLSVLRQ 235
Score = 29.8 bits (66), Expect = 3.0
Identities = 7/55 (12%), Positives = 18/55 (32%)
Query: 562 CDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKKKK 616
+ K + + + H+N G ++ +L + L++ K
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSVLRQGK 237
Score = 29.8 bits (66), Expect = 3.5
Identities = 6/50 (12%), Positives = 13/50 (26%)
Query: 534 CPVCSKTFPSKPSLTLHMRTHLKIKPYKCDVCDKSFVTAQKLSDHKNTHT 583
K S T+H K + + ++ + L +
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSV 232
Score = 28.2 bits (62), Expect = 9.4
Identities = 2/44 (4%), Positives = 14/44 (31%), Gaps = 7/44 (15%)
Query: 734 HVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGR 777
+++R + + + + + + + + G+
Sbjct: 201 NLARGEKRLQREKSEQVLDNPEDLRGPIH-------LSVLRQGK 237
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein,
C2H2 type zinc-finger, structural genomics; NMR {Mus
musculus} SCOP: g.37.1.2 g.37.1.2
Length = 79
Score = 29.8 bits (67), Expect = 0.58
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 770 FTCNYCGRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYY 812
FTCN CG ++K +HV + SC CGK F Y
Sbjct: 11 FTCNACGES-VKKIQVEKHVSNCRNCECLSCIDCGKDFWGDDY 52
Score = 29.4 bits (66), Expect = 0.87
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 686 NCDICKIVVLKSTLKSHMRIHDNAKPFSCTVCKKSFY 722
C+ C V K ++ H+ N + SC C K F+
Sbjct: 12 TCNACGESVKKIQVEKHVSNCRNCECLSCIDCGKDFW 48
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI,
protein structure initiative, center for eukaryotic
structural genomics, CESG; NMR {Homo sapiens} SCOP:
g.37.1.4
Length = 124
Score = 30.8 bits (69), Expect = 0.70
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 584 GNAPFPCNMCDRHFKRYSNLAQHKKV-IHLKKKK 616
G C C R+F +NL H + H K+ K
Sbjct: 47 GGGLHRCLACARYFIDSTNLKTHFRSKDHKKRLK 80
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein
ISL-1; protein-protein complex, LIM domain, Zn finger,
activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Length = 169
Score = 30.6 bits (69), Expect = 1.2
Identities = 14/114 (12%), Positives = 31/114 (27%), Gaps = 19/114 (16%)
Query: 712 FSCTVCKK----SFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNI 767
C+ C +++ + + KC +C G + + ++
Sbjct: 34 LKCSDCHVPLAERCFSRGESVYCK-DDFFKRFGT-KCAACQLGIPPTQVVRRAQDFVYHL 91
Query: 768 RPFTCNYCGRKFIR----------KFNCIRHVREHELKKKYSCTICGKTFHRSY 811
F C C R+ + C +E K+ G + +
Sbjct: 92 HCFACVVCKRQLATGDEFYLMEDSRLVCKAD---YETAKQGGSGGSGGSGGGTP 142
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 28.2 bits (62), Expect = 1.3
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 795 KKKYSCTICGKTFHRSYYLTAHVRVHNGER 824
+K + C CG+ F + L H +H G++
Sbjct: 10 EKSHQCRECGEIFFQYVSLIEHQVLHMGQK 39
Score = 26.7 bits (58), Expect = 4.6
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 558 KPYKCDVCDKSFVTAQKLSDHKNTHTG 584
K ++C C + F L +H+ H G
Sbjct: 11 KSHQCRECGEIFFQYVSLIEHQVLHMG 37
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 30.3 bits (67), Expect = 1.3
Identities = 6/30 (20%), Positives = 12/30 (40%), Gaps = 7/30 (23%)
Query: 49 EECSKMQSSTNIYDYKTPMPSTSSTPDVGV 78
+ K+Q+S +Y S P + +
Sbjct: 20 QALKKLQASLKLY---AD----DSAPALAI 42
Score = 28.8 bits (63), Expect = 4.7
Identities = 7/20 (35%), Positives = 12/20 (60%), Gaps = 3/20 (15%)
Query: 337 QE--SLESSVWGYQEDNGAP 354
Q L++S+ Y +D+ AP
Sbjct: 20 QALKKLQASLKLYADDS-AP 38
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA,
metal-binding, transcription; NMR {Mus musculus}
Length = 27
Score = 27.4 bits (60), Expect = 1.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 823 ERPFSCHICGKTSTTKSNHNKHVKTH 848
E+PFSC +C + S S KH++TH
Sbjct: 1 EKPFSCSLCPQRSRDFSAMTKHLRTH 26
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 37
Score = 27.5 bits (60), Expect = 1.5
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 415 KKHACIYCKKTFTGWKLRKYHMKAEHPEL 443
+ ++C C+K+F+ +L K H+K HPE+
Sbjct: 8 RSYSCPVCEKSFSEDRLIKSHIKTNHPEV 36
>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav
myristol group, icosahedral virus; HET: MYR; 3.30A
{Grass carp reovirus} PDB: 3k1q_C 3k1q_B
Length = 1214
Score = 31.3 bits (70), Expect = 1.6
Identities = 14/58 (24%), Positives = 22/58 (37%)
Query: 496 PPSLTSIKNKQRRCDTCSEVFDKLKDYQEHIKNVHPLPCPVCSKTFPSKPSLTLHMRT 553
P+ SI + V D I N C VC+ F + +L+ H+R+
Sbjct: 81 RPTSDSIAAVANATKPAAVVSDPQSMKVTPIVNPSSYVCNVCNARFSTMSALSEHLRS 138
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle;
NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Length = 192
Score = 30.0 bits (67), Expect = 2.0
Identities = 24/128 (18%), Positives = 38/128 (29%), Gaps = 16/128 (12%)
Query: 712 FSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFT 771
F C VCKK+ L T + CKSC Y + +
Sbjct: 35 FLCMVCKKN--------LDSTTVAVHGDEIY-CKSCYGKKYGPKGKGKGMGAGTLSTDKG 85
Query: 772 CNYC----GRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVRV-HNGERPF 826
+ + R N ++ C CG+ + + + + H F
Sbjct: 86 ESLGIKYEEGQSHRPTNPNASRMAQKVGGSDGCPRCGQAVYAAEKVIGAGKSWHKS--CF 143
Query: 827 SCHICGKT 834
C CGK+
Sbjct: 144 RCAKCGKS 151
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein
structure initiative, midwest center for structural
genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP:
e.59.1.1
Length = 309
Score = 30.5 bits (68), Expect = 2.1
Identities = 17/106 (16%), Positives = 31/106 (29%), Gaps = 14/106 (13%)
Query: 672 RYLPVDRKKTDENVNCDICKIVVLKSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQ 731
+T+ C C + ++ + + SC++C +
Sbjct: 170 GLEEGAVVETESRTLCPACGSPPMAGMIRQGGK-ETGLRYLSCSLCA-----------CE 217
Query: 732 WTHVSRMHMPFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGR 777
W H R+ C+ Y S E+ +R TC C
Sbjct: 218 W-HYVRIKCSH-CEESKHLAYLSLEHDGQPAEKAVLRAETCPSCQG 261
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA,
metal-binding, transcription; NMR {Mus musculus}
Length = 27
Score = 27.1 bits (59), Expect = 2.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 531 PLPCPVCSKTFPSKPSLTLHMRTH 554
P CP+C PS S+ HMR H
Sbjct: 3 PYRCPLCRAGCPSLASMQAHMRGH 26
Score = 26.3 bits (57), Expect = 3.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSH 764
P++C C G S + QAH+R H
Sbjct: 3 PYRCPLCRAGCPSLASMQAHMRGH 26
>1z1n_X Sixteen heme cytochrome; electron transport; HET: NAG NAA HEC;
2.10A {Desulfovibrio gigas}
Length = 560
Score = 30.5 bits (66), Expect = 2.5
Identities = 27/302 (8%), Positives = 64/302 (21%), Gaps = 23/302 (7%)
Query: 553 THLKIKPYKCDVCDKSFVTAQKLSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHL 612
+ K + C C K + + + D + N +
Sbjct: 193 VYAKGEEGSCVYCHKQEPLPSPVQQDRVVPS--------TRDASHESCVNCHLSTRKAQT 244
Query: 613 KKKKIKDFYCHCGEIFQSRGKLLWHQETHATVPKQCTYCTEKFTHTSSLTRHIRKNHDPR 672
+ + CH E + K P T ++ +
Sbjct: 245 ESGPVLCVGCHTAEAQAAWKKTAETPRLFRGQPDATLLVAGAATANGTVDVNWAAAGPGP 304
Query: 673 YLPVDRKKTDENVNCDICKIVVLKSTLKSHMRIHDNAKPFSCTVCKKSFYTKWNLGLHQW 732
+ NC C H + C + +K +
Sbjct: 305 VAFDHKAHEGFVGNCVTC----------HHPTQTGGSLAACGVACHTTTGSKDGNFVTTA 354
Query: 733 THVSRMHMPFKCKSCNRGFYSSSE--YQAHLRSHRNIRPF-TCNYCGRKFIRKFNCIRHV 789
++ + C C+ ++ + H + +C C
Sbjct: 355 QSAHQLGVTTSCVGCHTTQANARKECAGCHAPMQKTALSQNSCIQCHEAGFPTSGTQTLG 414
Query: 790 REHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVKTHH 849
+E ++ + I + + + + + H K +
Sbjct: 415 KEE--REATAAKILAAKDEKPKTVPLENVPEKLTLNYMDEKGDEWQAAEFPHRKIYQKLV 472
Query: 850 AR 851
Sbjct: 473 EE 474
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1,
LIM domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Length = 101
Score = 28.5 bits (64), Expect = 2.7
Identities = 11/76 (14%), Positives = 22/76 (28%), Gaps = 19/76 (25%)
Query: 712 FSCTVCKKSFYTKWNLGLHQWTHVSRMHMPF-----------KCKSCNRGFYSSSEYQAH 760
F C C + T V++ + KCK C + + + +
Sbjct: 34 FRCAKCLHPLANE--------TFVAKDNKILCNKCTTREDSPKCKGCFKAIVAGDQNVEY 85
Query: 761 LRSHRNIRPFTCNYCG 776
+ + F+ G
Sbjct: 86 KGTVWHKDCFSGPSSG 101
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 27.2 bits (59), Expect = 2.9
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 795 KKKYSCTICGKTFHRSYYLTAHVRVHNGE 823
+K+Y C+ C TF+ +L H + H +
Sbjct: 10 RKRYECSKCQATFNLRKHLIQHQKTHAAK 38
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 75
Score = 28.0 bits (62), Expect = 2.9
Identities = 12/72 (16%), Positives = 20/72 (27%), Gaps = 3/72 (4%)
Query: 787 RHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERPFSCHICGKTSTTKSNHNKHVK 846
H + C C L H + G R C CG+ + + H +
Sbjct: 7 GHEETECPLRLAVCQHCDLELSILK-LKEHED-YCGARTELCGNCGR-NVLVKDLKTHPE 63
Query: 847 THHARETINTEG 858
+ + G
Sbjct: 64 VCGREGSGPSSG 75
Score = 27.6 bits (61), Expect = 4.2
Identities = 11/57 (19%), Positives = 18/57 (31%), Gaps = 3/57 (5%)
Query: 741 PFKCKSCNRGFYSSSEYQAHLRSHRNIRPFTCNYCGRKFIRKFNCIRHVREHELKKK 797
C+ C+ S + + H R C CGR + K + H +
Sbjct: 17 LAVCQHCDLEL-SILKLKEHEDYCGA-RTELCGNCGRNVLVK-DLKTHPEVCGREGS 70
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Length = 32
Score = 26.6 bits (58), Expect = 3.1
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 798 YSCTICGKTFHRSYYLTAHVR 818
++C C K F RS L+ H++
Sbjct: 3 FACPACPKRFMRSDALSKHIK 23
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A
{Escherichia coli} SCOP: c.79.1.1
Length = 428
Score = 29.9 bits (68), Expect = 3.8
Identities = 9/45 (20%), Positives = 12/45 (26%)
Query: 478 PIKFENSNSFGTQIQEFLPPSLTSIKNKQRRCDTCSEVFDKLKDY 522
P KF+ S LP L + F L+
Sbjct: 379 PAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADFAALRKL 423
>3gox_A Restriction endonuclease HPY99I; endonuclease-DNA complex,
restriction enzyme, HPY99I, pseudopalindrome; HET: 1PE;
1.50A {Helicobacter pylori} PDB: 3fc3_A*
Length = 200
Score = 29.5 bits (65), Expect = 4.1
Identities = 17/85 (20%), Positives = 25/85 (29%), Gaps = 6/85 (7%)
Query: 771 TCNYCGR-KFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGER----- 824
CN C K F + + + SC C K + + +
Sbjct: 77 ICNICHILKNTDGFEINQTDAKGRKTTRPSCRECRKNIDGVKLSSTEKKKMDEIAPPKGS 136
Query: 825 PFSCHICGKTSTTKSNHNKHVKTHH 849
F+C IC K S N +H
Sbjct: 137 VFTCPICEKRSIVGVTANLVHDHNH 161
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing,
mRNA splicing; NMR {Homo sapiens}
Length = 92
Score = 27.8 bits (62), Expect = 4.9
Identities = 8/39 (20%), Positives = 12/39 (30%), Gaps = 9/39 (23%)
Query: 509 CDTCSEVFDKLKDYQEHIKNVHPLPCPVCSKTFPSKPSL 547
CD C + + CP C + S +L
Sbjct: 37 CDEC---------IRTALLESDEHTCPTCHQNDVSPDAL 66
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion,
acrosom; 2.62A {Homo sapiens}
Length = 126
Score = 28.1 bits (63), Expect = 5.4
Identities = 11/81 (13%), Positives = 20/81 (24%), Gaps = 21/81 (25%)
Query: 712 FSCTVCKKSFYTKWNLGLHQWTHVSRMHMPF-----------KCKSCNRGFYSSSEYQAH 760
F C C + +V P C+ C+ + +
Sbjct: 31 FCCFDCDSILAGE--------IYVMVNDKPVCKPCYVKNHAVVCQGCHNAIDPEVQRVTY 82
Query: 761 LRS--HRNIRPFTCNYCGRKF 779
H + F C+ C +
Sbjct: 83 NNFSWHASTECFLCSCCSKCL 103
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural
genomics, PSI-2, protein structure initiative; NMR
{Silicibacter pomeroyi}
Length = 67
Score = 26.9 bits (59), Expect = 5.8
Identities = 5/12 (41%), Positives = 7/12 (58%)
Query: 771 TCNYCGRKFIRK 782
C YC K++ K
Sbjct: 42 ECPYCDCKYVLK 53
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic}
SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Length = 30
Score = 26.0 bits (56), Expect = 5.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 824 RPFSCHICGKTSTTKSNHNKHVKTHHARE 852
+ + C C S SN H+KT H++E
Sbjct: 1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE 29
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA
binding motif, transcriptional regulator, bacter
antitoxin, Zn binding protein, transcription
regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB:
3gn5_A* 3gn5_B* 2kz8_A
Length = 133
Score = 28.2 bits (62), Expect = 6.1
Identities = 13/85 (15%), Positives = 22/85 (25%), Gaps = 6/85 (7%)
Query: 561 KCDVCDKSFVTAQK------LSDHKNTHTGNAPFPCNMCDRHFKRYSNLAQHKKVIHLKK 614
KC VC + + + K G C C+ + +
Sbjct: 4 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 63
Query: 615 KKIKDFYCHCGEIFQSRGKLLWHQE 639
+ I + R KL Q+
Sbjct: 64 ASVNAETVAPEFIVKVRKKLSLTQK 88
>2cvc_A Cytochrome CC3, high-molecular-weight cytochrome C precursor;
electron transport; HET: HEM; 2.00A {Desulfovibrio
vulgaris} SCOP: a.138.1.1 PDB: 1gws_A* 1h29_A*
Length = 545
Score = 29.0 bits (62), Expect = 7.1
Identities = 19/147 (12%), Positives = 35/147 (23%), Gaps = 3/147 (2%)
Query: 708 NAKPFSCTVCKKSFYTKWNLGLHQWTHVSRMHMPFKCKSC-NRGFYSSSEYQAHLRSHRN 766
+ + +CT C T + + + + C C N + H
Sbjct: 313 HVRIDTCTACHTVNGTADSKFVQLEKAMHQPDSMRSCVGCHNTRVQQPTCAGCHGFIKPT 372
Query: 767 IRPFTCNYC-GRKFIRKFNCIRHVREHELKKKYSCTICGKTFHRSYYLTAHVRVHNGERP 825
C C + LK + + +++
Sbjct: 373 KSDAQCGVCHVAAPGFDAKQVEAGALLNLKAEQRSQVAASMLSARPQPKGTFDLNDIPEK 432
Query: 826 FSCHICGKT-STTKSNHNKHVKTHHAR 851
K ++ H K VKT A
Sbjct: 433 VVIGSIAKEYQPSEFPHRKIVKTLIAG 459
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain,
PRMT3, structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Mus musculus}
SCOP: g.37.1.5
Length = 121
Score = 27.6 bits (61), Expect = 7.8
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 419 CIYCKKTFTGWKLRKYHMKAEH 440
C++C + F + H K EH
Sbjct: 18 CLFCDRLFASAEETFSHCKLEH 39
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown
function, PSI-2, protein structure initiative; NMR
{Rhodobacter sphaeroides 2}
Length = 80
Score = 26.9 bits (59), Expect = 8.3
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 771 TCNYCGRKFIRK 782
C YC R++I +
Sbjct: 55 ECGYCDRRYIHE 66
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein
of testis, proliferation potential-related protein,
protein P2P-R; NMR {Homo sapiens}
Length = 74
Score = 26.6 bits (59), Expect = 8.6
Identities = 5/26 (19%), Positives = 10/26 (38%)
Query: 523 QEHIKNVHPLPCPVCSKTFPSKPSLT 548
+ + CP C + S +L+
Sbjct: 44 RTALLESDEHTCPTCHQNDVSPDALS 69
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 25.6 bits (55), Expect = 9.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 558 KPYKCDVCDKSFVTAQKLSDHKNTHT 583
KP+KC +C+ + + L H N H+
Sbjct: 8 KPFKCSLCEYATRSKSNLKAHMNRHS 33
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.316 0.130 0.399
Gapped
Lambda K H
0.267 0.0745 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 12,476,267
Number of extensions: 710120
Number of successful extensions: 4370
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3634
Number of HSP's successfully gapped: 1480
Length of query: 858
Length of database: 6,701,793
Length adjustment: 102
Effective length of query: 756
Effective length of database: 3,853,851
Effective search space: 2913511356
Effective search space used: 2913511356
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (27.6 bits)