Query psy8289
Match_columns 91
No_of_seqs 106 out of 232
Neff 5.0
Searched_HMMs 46136
Date Fri Aug 16 23:40:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8289.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8289hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1213|consensus 100.0 8.2E-36 1.8E-40 248.2 4.9 88 1-88 1-98 (614)
2 PF04825 Rad21_Rec8_N: N termi 100.0 2E-32 4.3E-37 185.8 3.0 87 1-87 1-97 (111)
3 PF06278 DUF1032: Protein of u 80.8 0.77 1.7E-05 39.0 1.1 40 36-81 2-41 (565)
4 COG1965 CyaY Protein implicate 68.0 1.9 4E-05 29.7 0.2 20 4-23 47-66 (106)
5 TIGR03422 mito_frataxin fratax 67.3 1.5 3.1E-05 29.3 -0.4 19 4-22 46-64 (97)
6 TIGR03421 FeS_CyaY iron donor 62.3 1.6 3.6E-05 29.2 -0.9 20 4-23 44-63 (102)
7 cd00503 Frataxin Frataxin is a 61.0 2.1 4.6E-05 28.7 -0.6 20 4-23 47-66 (105)
8 PRK00446 cyaY frataxin-like pr 56.0 2 4.3E-05 29.0 -1.3 20 4-23 46-65 (105)
9 PRK01379 cyaY frataxin-like pr 53.4 3.4 7.3E-05 28.0 -0.6 17 6-22 48-64 (103)
10 COG0779 Uncharacterized protei 53.3 17 0.00037 26.1 3.0 48 34-81 3-67 (153)
11 COG5242 TFB4 RNA polymerase II 42.0 23 0.00051 27.9 2.4 23 50-72 65-87 (296)
12 KOG2359|consensus 38.9 23 0.0005 30.9 2.1 26 51-76 68-93 (688)
13 COG4953 PbpC Membrane carboxyp 33.1 19 0.00041 32.0 0.8 27 11-37 129-155 (733)
14 PF01491 Frataxin_Cyay: Fratax 31.8 3.5 7.7E-05 27.6 -3.1 18 5-22 50-67 (109)
15 PF00912 Transgly: Transglycos 28.3 30 0.00064 25.2 1.0 25 13-37 88-112 (178)
16 PF08180 BAGE: B melanoma anti 26.2 36 0.00078 18.2 0.8 18 15-32 4-24 (28)
17 PRK13481 glycosyltransferase; 22.5 50 0.0011 25.3 1.3 23 13-35 118-140 (232)
18 PF15572 Imm26: Immunity prote 22.1 50 0.0011 22.3 1.1 25 3-27 60-85 (96)
No 1
>KOG1213|consensus
Probab=100.00 E-value=8.2e-36 Score=248.21 Aligned_cols=88 Identities=52% Similarity=0.755 Sum_probs=84.5
Q ss_pred CccchhhhhccCchhHHHHHhhhccccchhhhhcccHHHHHHhhcCCCCcc----------ceeEeeecccCccccchHH
Q psy8289 1 MFYAQFVLAKKGPLARIWLAAHWDKKLTKAHVFETNIEKSVDGILQPKFNQ----------VTERLESRKVCPGGDNFEK 70 (91)
Q Consensus 1 MFys~~lLskkgpLa~iWlAA~~~kkL~K~~i~~~dI~~s~~~I~~p~~pl----------gvvRIYsrK~~yL~~D~~~ 70 (91)
|||||.+|+||||||+|||||||+|||+|+||++|||+++|++|++|.+|| ||||||||||+||++|||+
T Consensus 1 MFYs~~vLakKGPLa~IWlAAh~~kKL~K~qv~~tdI~~sve~Il~p~~~lALRtSghLLlGVVRIYSrK~~YLl~Dcne 80 (614)
T KOG1213|consen 1 MFYSHFVLAKKGPLAKIWLAAHWEKKLSKAQVFETDIPQSVEEILQPKVPLALRTSGHLLLGVVRIYSRKVKYLLDDCNE 80 (614)
T ss_pred CcchhhhHhhcCchhhhhHHhHHhhhcchhheeeccHHHHHHHHhCcccceehhhhcccceeeEEeehhhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999884 6899999999999999999
Q ss_pred HHHHhhhcCCCCCCCCCC
Q psy8289 71 HWFRIKVHPDWESNPRPS 88 (91)
Q Consensus 71 ~~~rik~~~~~~~~~~~~ 88 (91)
++.|||.+|+......|+
T Consensus 81 al~kIk~afr~~~vd~p~ 98 (614)
T KOG1213|consen 81 ALLKIKMAFRSGQVDLPE 98 (614)
T ss_pred HHHHHHHHhccccccCCC
Confidence 999999999999877775
No 2
>PF04825 Rad21_Rec8_N: N terminus of Rad21 / Rec8 like protein; InterPro: IPR006910 This domain represents a conserved N-terminal region found in eukaryotic cohesins of the Rad21, Rec8 and Scc1 families. Rad21/Rec8 like proteins mediate sister chromatid cohesion during mitosis and meiosis, as part of the cohesin complex []. Cohesion is necessary for homologous recombination (including double-strand break repair) and correct chromatid segregation. These proteins may also be involved in chromosome condensation. Dissociation at the metaphase to anaphase transition causes loss of cohesion and chromatid segregation [].; GO: 0005515 protein binding
Probab=99.97 E-value=2e-32 Score=185.81 Aligned_cols=87 Identities=32% Similarity=0.443 Sum_probs=80.5
Q ss_pred CccchhhhhccCchhHHHHHhhhccccchhhhhcccHHHHHHhhcCCCCcc----------ceeEeeecccCccccchHH
Q psy8289 1 MFYAQFVLAKKGPLARIWLAAHWDKKLTKAHVFETNIEKSVDGILQPKFNQ----------VTERLESRKVCPGGDNFEK 70 (91)
Q Consensus 1 MFys~~lLskkgpLa~iWlAA~~~kkL~K~~i~~~dI~~s~~~I~~p~~pl----------gvvRIYsrK~~yL~~D~~~ 70 (91)
||||++||+++|||+.+|+|||+++||+|++|+++||+++|++|++|+.|+ |+||||++|++||++||++
T Consensus 1 MFy~~~iL~k~~~l~~vWlaat~~~kl~k~~i~~vdI~~~c~~I~~~~~~~sLRlss~LL~Gvv~Iy~kKv~yLl~D~~~ 80 (111)
T PF04825_consen 1 MFYSHDILSKKGPLATVWLAATLGKKLSKKQILQVDIPKICEEIIEPENPLSLRLSSQLLYGVVRIYSKKVEYLLSDCNE 80 (111)
T ss_pred CCccHHHHhcCCcHHHHHHHHhccCCCCHHHHHhCCHHHHHHHHhCCCcCeeHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998774 7899999999999999999
Q ss_pred HHHHhhhcCCCCCCCCC
Q psy8289 71 HWFRIKVHPDWESNPRP 87 (91)
Q Consensus 71 ~~~rik~~~~~~~~~~~ 87 (91)
++.+|+..+......-|
T Consensus 81 ~~~~l~~~~~~~~~dl~ 97 (111)
T PF04825_consen 81 LLSKLKRAFRPKKIDLP 97 (111)
T ss_pred HHHHHHHHhcccccCCC
Confidence 99999999885433333
No 3
>PF06278 DUF1032: Protein of unknown function (DUF1032); InterPro: IPR009378 This entry includes a regulatory subunit of Non-SMC condensin II complex called H2. Non-SMC condensin II complex seems to provide chromosomes with an additional level of organisation and rigidity and in establishing mitotic chromosome architecture. May play a role in lineage-specific role in T-cell development.
Probab=80.79 E-value=0.77 Score=39.02 Aligned_cols=40 Identities=15% Similarity=-0.159 Sum_probs=30.2
Q ss_pred cHHHHHHhhcCCCCccceeEeeecccCccccchHHHHHHhhhcCCC
Q psy8289 36 NIEKSVDGILQPKFNQVTERLESRKVCPGGDNFEKHWFRIKVHPDW 81 (91)
Q Consensus 36 dI~~s~~~I~~p~~plgvvRIYsrK~~yL~~D~~~~~~rik~~~~~ 81 (91)
|..+|+--| -|-+-||||||+||+.-+-.++.-|...-+-
T Consensus 2 nFaEAalli------Qgsa~vYskKVeyly~lv~~~l~~l~~~~~~ 41 (565)
T PF06278_consen 2 NFAEAALLI------QGSACVYSKKVEYLYSLVYQALDFLSGKKRA 41 (565)
T ss_pred CHHHHHHHH------hcchhhHHHHHHHHHHHHHHHHHHHhccccc
Confidence 555555555 3667799999999999999999888655543
No 4
>COG1965 CyaY Protein implicated in iron transport, frataxin homolog [Inorganic ion transport and metabolism]
Probab=67.95 E-value=1.9 Score=29.65 Aligned_cols=20 Identities=40% Similarity=0.848 Sum_probs=16.6
Q ss_pred chhhhhccCchhHHHHHhhh
Q psy8289 4 AQFVLAKKGPLARIWLAAHW 23 (91)
Q Consensus 4 s~~lLskkgpLa~iWlAA~~ 23 (91)
|+-++.|..|+-+||||+-.
T Consensus 47 s~iiINkQ~P~~qiWlAs~~ 66 (106)
T COG1965 47 SQIIINKQEPLQQIWLASKV 66 (106)
T ss_pred cEEEEeCCChHHHHHhhccC
Confidence 45577899999999999865
No 5
>TIGR03422 mito_frataxin frataxin. Frataxin is a mitochondrial protein, mutation of which leads to the disease Friedreich's ataxia. Its orthologs are widely distributed in the bacteria, associated with the ISC system for iron-sulfur cluster assembly, and designated CyaY. This exception-type model allows those examples of frataxin per se that score above the trusted cutoff to the CyaY equivalog-type model (TIGR03421) to be named appropriately.
Probab=67.34 E-value=1.5 Score=29.29 Aligned_cols=19 Identities=32% Similarity=0.765 Sum_probs=16.1
Q ss_pred chhhhhccCchhHHHHHhh
Q psy8289 4 AQFVLAKKGPLARIWLAAH 22 (91)
Q Consensus 4 s~~lLskkgpLa~iWlAA~ 22 (91)
++.|++|..|.-+|||||-
T Consensus 46 ~~~VINkQ~p~~QIWlsSp 64 (97)
T TIGR03422 46 GTYVINKQPPNKQIWLSSP 64 (97)
T ss_pred CEEEEeCCChhhHHheecC
Confidence 4557889999999999984
No 6
>TIGR03421 FeS_CyaY iron donor protein CyaY. Members of this protein family are the iron-sulfur cluster (FeS) metabolism protein CyaY, a homolog of eukaryotic frataxin. ISC is one of several bacterial systems for FeS assembly; we find by Partial Phylogenetic Profiling vs. the ISC system that CyaY most like work with the ISC system for FeS cluster biosynthesis. A study of of cyaY mutants in Salmonella enterica bears this out. Although the trusted cutoff is set low enough to include eukaryotic frataxin sequences, a narrower, exception-type model (TIGR03421) identifies identifies members of that specific set.
Probab=62.35 E-value=1.6 Score=29.19 Aligned_cols=20 Identities=45% Similarity=0.848 Sum_probs=16.4
Q ss_pred chhhhhccCchhHHHHHhhh
Q psy8289 4 AQFVLAKKGPLARIWLAAHW 23 (91)
Q Consensus 4 s~~lLskkgpLa~iWlAA~~ 23 (91)
++.|++|..|.-+||||+-.
T Consensus 44 ~~~VINkQ~p~~QIWlasps 63 (102)
T TIGR03421 44 SQIIINKQEPLHQIWLAAKS 63 (102)
T ss_pred CEEEEeCCchhhhheeecCC
Confidence 45578899999999999753
No 7
>cd00503 Frataxin Frataxin is a nuclear-encoded mitochondrial protein implicated in Friedreich's ataxia (FRDA), an human autosomal recessive neurodegenerative disease; Frataxin is found in eukaryotes and in purple bacteria; lack of frataxin causes iron to accumulate in the mitochondrial matrix suggesting that frataxin is involved in mitochondrial iron homeostasis and possibly in iron transport; the domain has an alpha-beta fold consisting of two helices flanking an antiparallel beta sheet.
Probab=61.00 E-value=2.1 Score=28.72 Aligned_cols=20 Identities=35% Similarity=0.793 Sum_probs=16.2
Q ss_pred chhhhhccCchhHHHHHhhh
Q psy8289 4 AQFVLAKKGPLARIWLAAHW 23 (91)
Q Consensus 4 s~~lLskkgpLa~iWlAA~~ 23 (91)
++.|++|..|.-+||||+-.
T Consensus 47 ~~~VINkQ~p~~QIWlaSp~ 66 (105)
T cd00503 47 STIVINRQEPLRQIWLASKV 66 (105)
T ss_pred CEEEEeCCchhhhhheecCC
Confidence 34577899999999999754
No 8
>PRK00446 cyaY frataxin-like protein; Provisional
Probab=56.03 E-value=2 Score=28.97 Aligned_cols=20 Identities=30% Similarity=0.781 Sum_probs=16.3
Q ss_pred chhhhhccCchhHHHHHhhh
Q psy8289 4 AQFVLAKKGPLARIWLAAHW 23 (91)
Q Consensus 4 s~~lLskkgpLa~iWlAA~~ 23 (91)
++.|++|..|.-+||||+-.
T Consensus 46 ~~~VINkQ~p~~QIWlas~s 65 (105)
T PRK00446 46 SKIIINRQEPLHELWLAAKS 65 (105)
T ss_pred CEEEEeCCCchhheeEecCC
Confidence 34578899999999999853
No 9
>PRK01379 cyaY frataxin-like protein; Provisional
Probab=53.43 E-value=3.4 Score=27.95 Aligned_cols=17 Identities=29% Similarity=0.755 Sum_probs=14.6
Q ss_pred hhhhccCchhHHHHHhh
Q psy8289 6 FVLAKKGPLARIWLAAH 22 (91)
Q Consensus 6 ~lLskkgpLa~iWlAA~ 22 (91)
.|++|..|.-+||||+-
T Consensus 48 ~VINkQ~p~~QIWlASp 64 (103)
T PRK01379 48 YVINKQSAAKEIWLSSP 64 (103)
T ss_pred EEEeCCChhhhheeecc
Confidence 46788999999999984
No 10
>COG0779 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.28 E-value=17 Score=26.14 Aligned_cols=48 Identities=19% Similarity=0.097 Sum_probs=34.6
Q ss_pred cccHHHHHHhhcCCCCc-c---------------ceeEeeecc-cCccccchHHHHHHhhhcCCC
Q psy8289 34 ETNIEKSVDGILQPKFN-Q---------------VTERLESRK-VCPGGDNFEKHWFRIKVHPDW 81 (91)
Q Consensus 34 ~~dI~~s~~~I~~p~~p-l---------------gvvRIYsrK-~~yL~~D~~~~~~rik~~~~~ 81 (91)
..++.+-+.+|++|.+. | .++|||-.+ ..--++||.++-..+...+..
T Consensus 3 ~~~~~~~v~~liep~~~~lG~ELv~ve~~~~~~~~~lrI~id~~g~v~lddC~~vSr~is~~LD~ 67 (153)
T COG0779 3 ESPITEKVTELIEPVVESLGFELVDVEFVKEGRDSVLRIYIDKEGGVTLDDCADVSRAISALLDV 67 (153)
T ss_pred ccchHHHHHHHHHHhHhhcCcEEEEEEEEEcCCCcEEEEEeCCCCCCCHHHHHHHHHHHHHHhcc
Confidence 34556666677766432 3 259999998 555599999999999888873
No 11
>COG5242 TFB4 RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB4 [Transcription / DNA replication, recombination, and repair]
Probab=41.97 E-value=23 Score=27.88 Aligned_cols=23 Identities=9% Similarity=-0.318 Sum_probs=19.1
Q ss_pred ccceeEeeecccCccccchHHHH
Q psy8289 50 NQVTERLESRKVCPGGDNFEKHW 72 (91)
Q Consensus 50 plgvvRIYsrK~~yL~~D~~~~~ 72 (91)
-.||+-=||++.+||+...+..+
T Consensus 65 rVaVva~~s~~~~yLypss~s~~ 87 (296)
T COG5242 65 RVAVVAGYSQGKTYLYPSSESAL 87 (296)
T ss_pred eEEEEEeccCceEEeccCcchhh
Confidence 36788899999999999877743
No 12
>KOG2359|consensus
Probab=38.86 E-value=23 Score=30.94 Aligned_cols=26 Identities=15% Similarity=-0.197 Sum_probs=19.9
Q ss_pred cceeEeeecccCccccchHHHHHHhh
Q psy8289 51 QVTERLESRKVCPGGDNFEKHWFRIK 76 (91)
Q Consensus 51 lgvvRIYsrK~~yL~~D~~~~~~rik 76 (91)
.|-|-||+|||+|+++=+-.++.-+.
T Consensus 68 qgs~~vy~~kv~~~y~l~~~~~~~~~ 93 (688)
T KOG2359|consen 68 QGSCAVYGRKVDHVYELTISVVDLVE 93 (688)
T ss_pred hcchhhhhhhhHHHHHHHHHHHHHHH
Confidence 36699999999999987666665443
No 13
>COG4953 PbpC Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell envelope biogenesis, outer membrane]
Probab=33.13 E-value=19 Score=31.95 Aligned_cols=27 Identities=26% Similarity=0.612 Sum_probs=23.1
Q ss_pred cCchhHHHHHhhhccccchhhhhcccH
Q psy8289 11 KGPLARIWLAAHWDKKLTKAHVFETNI 37 (91)
Q Consensus 11 kgpLa~iWlAA~~~kkL~K~~i~~~dI 37 (91)
.|.+-++|.|=.+|.++||++|++.=+
T Consensus 129 ~gK~~qi~rAiqLE~~lSK~EIL~lYL 155 (733)
T COG4953 129 GGKIRQIWRAIQLESRLSKREILELYL 155 (733)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 367889999999999999999987533
No 14
>PF01491 Frataxin_Cyay: Frataxin-like domain; InterPro: IPR002908 The eukaryotic proteins in this entry include frataxin, the protein that is mutated in Friedreich's ataxia [], and related sequences. Friedreich's ataxia is a progressive neurodegenerative disorder caused by loss of function mutations in the gene encoding frataxin (FRDA). Frataxin mRNA is predominantly expressed in tissues with a high metabolic rate (including liver, kidney, brown fat and heart). Mouse and yeast frataxin homologues contain a potential N-terminal mitochondrial targeting sequence, and human frataxin has been observed to co-localise with a mitochondrial protein. Furthermore, disruption of the yeast gene has been shown to result in mitochondrial dysfunction. Friedreich's ataxia is thus believed to be a mitochondrial disease caused by a mutation in the nuclear genome (specifically, expansion of an intronic GAA triplet repeat) [, , ]. The bacterial proteins in this entry are iron-sulphur cluster (FeS) metabolism CyaY proteins hmologous to eukaryotic frataxin. Partial Phylogenetic Profiling [] suggests that CyaY most likely functions as part of the ISC system for FeS cluster biosynthesis, and is supported by expermimental data in some species [, ]. ; PDB: 1EW4_A 2P1X_A 1SOY_A 2EFF_A 3T3T_B 3S4M_A 3T3K_A 3S5D_A 1LY7_A 3T3X_B ....
Probab=31.82 E-value=3.5 Score=27.63 Aligned_cols=18 Identities=39% Similarity=0.844 Sum_probs=15.4
Q ss_pred hhhhhccCchhHHHHHhh
Q psy8289 5 QFVLAKKGPLARIWLAAH 22 (91)
Q Consensus 5 ~~lLskkgpLa~iWlAA~ 22 (91)
+.+++|..|.-+||||+-
T Consensus 50 ~~VINkQ~p~~QIWlsSp 67 (109)
T PF01491_consen 50 QYVINKQPPNRQIWLSSP 67 (109)
T ss_dssp EEEEEEECCCTEEEEEET
T ss_pred EEEEeCCCHHHHHHHhcc
Confidence 457788999999999987
No 15
>PF00912 Transgly: Transglycosylase; InterPro: IPR001264 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 51 GT51 from CAZY comprises enzymes with only one known activity; murein polymerases (2.4 from EC). These enzymes utilise MurNAc-GlcNAc-P-P-lipid II as the sugar donor. The family includes the bifunctional penicillin-binding proteins that have a transglycosylase (N terminus) and transpeptidase (C terminus) domain [] and the monofunctional biosynthetic peptidoglycan transglycosylases [].; GO: 0003824 catalytic activity, 0009252 peptidoglycan biosynthetic process, 0009274 peptidoglycan-based cell wall; PDB: 3VMT_A 3VMS_B 3VMQ_A 3VMR_A 3D3H_A 3NB7_A 3NB6_A 2OQO_A 2V2F_A 3HZS_A ....
Probab=28.28 E-value=30 Score=25.20 Aligned_cols=25 Identities=20% Similarity=0.367 Sum_probs=20.9
Q ss_pred chhHHHHHhhhccccchhhhhcccH
Q psy8289 13 PLARIWLAAHWDKKLTKAHVFETNI 37 (91)
Q Consensus 13 pLa~iWlAA~~~kkL~K~~i~~~dI 37 (91)
.+..+|+|..++++++|++|++.=+
T Consensus 88 K~~E~~~A~~le~~~sK~~ILe~YL 112 (178)
T PF00912_consen 88 KLREAILALRLERRYSKDEILELYL 112 (178)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 5778899999999999999887533
No 16
>PF08180 BAGE: B melanoma antigen family; InterPro: IPR012530 This family consists of the B melanoma antigen (BAGE) peptides. The BAGE gene encodes a human tumour antigen that is recognised by a cytolytic T lymphocyte. BAGE genes are expressed in melanomas, bladder and lung carcinomas and in a few tumours of other histological types [].
Probab=26.22 E-value=36 Score=18.21 Aligned_cols=18 Identities=44% Similarity=0.752 Sum_probs=11.9
Q ss_pred hHHHHHhhh---ccccchhhh
Q psy8289 15 ARIWLAAHW---DKKLTKAHV 32 (91)
Q Consensus 15 a~iWlAA~~---~kkL~K~~i 32 (91)
+.+||||.- +.|+++.++
T Consensus 4 as~~LAaSaqaLeAkl~~~dl 24 (28)
T PF08180_consen 4 ASLWLAASAQALEAKLSKEDL 24 (28)
T ss_pred HHHHHHHHHHHHHhhhchhcc
Confidence 568998732 667777653
No 17
>PRK13481 glycosyltransferase; Provisional
Probab=22.55 E-value=50 Score=25.32 Aligned_cols=23 Identities=13% Similarity=0.353 Sum_probs=19.9
Q ss_pred chhHHHHHhhhccccchhhhhcc
Q psy8289 13 PLARIWLAAHWDKKLTKAHVFET 35 (91)
Q Consensus 13 pLa~iWlAA~~~kkL~K~~i~~~ 35 (91)
.+..+|+|-.+|+.+||++|++.
T Consensus 118 K~~E~~~A~~lE~~~SK~eILe~ 140 (232)
T PRK13481 118 KVKELFVAHRVEKQYSKNEILSF 140 (232)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHH
Confidence 56778999999999999998874
No 18
>PF15572 Imm26: Immunity protein 26
Probab=22.12 E-value=50 Score=22.25 Aligned_cols=25 Identities=24% Similarity=0.690 Sum_probs=18.2
Q ss_pred cchhhhhccC-chhHHHHHhhhcccc
Q psy8289 3 YAQFVLAKKG-PLARIWLAAHWDKKL 27 (91)
Q Consensus 3 ys~~lLskkg-pLa~iWlAA~~~kkL 27 (91)
|+++-.++.+ .+++-||..||++.+
T Consensus 60 fP~Ea~~~~~~aiSt~Wli~NW~kwi 85 (96)
T PF15572_consen 60 FPKEAESKEGRAISTEWLIENWEKWI 85 (96)
T ss_pred CCHHHhhcccccccHHHHHHHHHHhh
Confidence 4555555554 999999999998643
Done!