RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy8300
(256 letters)
>gnl|CDD|225030 COG2119, COG2119, Predicted membrane protein [Function unknown].
Length = 190
Score = 131 bits (332), Expect = 3e-38
Identities = 64/226 (28%), Positives = 92/226 (40%), Gaps = 65/226 (28%)
Query: 33 AFVAALSVIVVSELGDKTFFIAAIMAMRHPRVTVFIGAIAALALMTKFFHHEMLLDKVYV 92
A + +L ++ ++E+GDKT IA ++AMR+ R VF G AL M
Sbjct: 3 ALLVSLLMVALAEIGDKTQLIAMLLAMRYRRWPVFAGIAIALFAMH-------------- 48
Query: 93 QCTFYTYSPQVLVLSGAFDMAA-NIIPRIWTYYISTVLFIIFGLKMLREGYKMSPNEGQE 151
L+ AA +++P + S VLF+ F + ML E
Sbjct: 49 ------------ALAVLVGHAAASLLPERPLAWASGVLFLAFAVWMLIED---------- 86
Query: 152 ELEEVQSDLRKRDDEFEKEALTGDVESGKSYQAQTISLLSRVVIQAFTLTFLAEWGDRSQ 211
K DDE +AQ S V + F FLAE GD++Q
Sbjct: 87 ----------KEDDE----------------EAQAASPRG-VFVTTFITFFLAELGDKTQ 119
Query: 212 LTTIILAARE-DVYGVTLGGVLGHSLCTGLAVIGGRFIAQRISVRT 256
+ TI LAA + V G LG L + LAV+ G+ IA ++ R
Sbjct: 120 IATIALAADYHSPWAVFAGTTLGMILASVLAVLLGKLIAGKLPERL 165
Score = 32.3 bits (74), Expect = 0.16
Identities = 22/110 (20%), Positives = 38/110 (34%), Gaps = 26/110 (23%)
Query: 33 AFVAALSVIVVSELGDKTFFIAAIMAMRHPRV-TVFIGAIAALALMTKFFHHEMLLDKVY 91
FV ++ELGDKT +A + VF G + L +
Sbjct: 101 VFVTTFITFFLAELGDKTQIATIALAADYHSPWAVFAGTTLGMILAS------------- 147
Query: 92 VQCTFYTYSPQVLVLSGAFDMAANIIPRIWTYYISTVLFIIFGLKMLREG 141
++ + A +P +I+ +LF+IF L +L +
Sbjct: 148 ------------VLAVLLGKLIAGKLPERLLRFIAALLFLIFALVLLWQV 185
>gnl|CDD|216341 pfam01169, UPF0016, Uncharacterized protein family UPF0016. This
family contains integral membrane proteins of unknown
function. Most members of the family contain two copies
of a region that contains an EXGD motif. Each of these
regions contains three predicted transmembrane regions.
Length = 78
Score = 72.1 bits (178), Expect = 1e-16
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 195 IQAFTLTFLAEWGDRSQLTTIILAARE--DVYGVTLGGVLGHSLCTGLAVIGGRFIAQRI 252
+ +F L FLAE GD++QL TI LAAR + V LG L +L T LAV+ GR++A +
Sbjct: 2 LTSFLLIFLAELGDKTQLATIALAARYSRSPWAVFLGATLALALATLLAVLLGRWLATLL 61
Query: 253 SVRT 256
R
Sbjct: 62 PPRV 65
Score = 64.0 bits (157), Expect = 1e-13
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 29/104 (27%)
Query: 34 FVAALSVIVVSELGDKTFFIAAIMAMRHPR--VTVFIGAIAALALMTKFFHHEMLLDKVY 91
F+ + +I ++ELGDKT +A R+ R VF+GA ALAL T
Sbjct: 1 FLTSFLLIFLAELGDKTQLATIALAARYSRSPWAVFLGATLALALAT------------- 47
Query: 92 VQCTFYTYSPQVLVLSGAF-DMAANIIPRIWTYYISTVLFIIFG 134
+L+ A ++P ++++ VLF+ FG
Sbjct: 48 -------------LLAVLLGRWLATLLPPRVLHFVAGVLFLAFG 78
>gnl|CDD|226404 COG3887, COG3887, Predicted signaling protein consisting of a
modified GGDEF domain and a DHH domain [Signal
transduction mechanisms].
Length = 655
Score = 31.5 bits (72), Expect = 0.49
Identities = 20/97 (20%), Positives = 33/97 (34%), Gaps = 15/97 (15%)
Query: 77 MTKFFHHEMLLDKVYVQCTFYTYSPQVLVLSGAFDMAANIIPRIWTYYISTVLFIIFGLK 136
M KF+H +L F ++L + V+F+IF L
Sbjct: 1 MNKFYHKRLLSY------IFLGLIAFSIILIIVSFSFNWW--LSAIAVLLLVVFLIFLLL 52
Query: 137 MLREGYKMSPNEGQEELEEVQSDLRKRDDEFEKEALT 173
Y Q+ + S L + ++ +EALT
Sbjct: 53 AFTLFY-------QDSDQNYISYLSYQAEKSLEEALT 82
>gnl|CDD|192111 pfam08647, BRE1, BRE1 E3 ubiquitin ligase. BRE1 is an E3 ubiquitin
ligase that has been shown to act as a transcriptional
activator through direct activator interactions.
Length = 96
Score = 28.8 bits (65), Expect = 0.76
Identities = 9/25 (36%), Positives = 19/25 (76%)
Query: 147 NEGQEELEEVQSDLRKRDDEFEKEA 171
+E E+L++++++LR+R E EK+
Sbjct: 72 SELIEQLKDLENELRRRIKELEKQL 96
>gnl|CDD|218661 pfam05622, HOOK, HOOK protein. This family consists of several
HOOK1, 2 and 3 proteins from different eukaryotic
organisms. The different members of the human gene
family are HOOK1, HOOK2 and HOOK3. Different domains
have been identified in the three human HOOK proteins,
and it was demonstrated that the highly conserved
NH2-domain mediates attachment to microtubules, whereas
the central coiled-coil motif mediates homodimerisation
and the more divergent C-terminal domains are involved
in binding to specific organelles (organelle-binding
domains). It has been demonstrated that endogenous HOOK3
binds to Golgi membranes, whereas both HOOK1 and HOOK2
are localised to discrete but unidentified cellular
structures. In mice the Hook1 gene is predominantly
expressed in the testis. Hook1 function is necessary for
the correct positioning of microtubular structures
within the haploid germ cell. Disruption of Hook1
function in mice causes abnormal sperm head shape and
fragile attachment of the flagellum to the sperm head.
Length = 713
Score = 30.2 bits (68), Expect = 1.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 136 KMLREGYKMSPNEGQEELEEVQSDLRKRDDEFEKE 170
KMLR G + S NE EL+++ D +R++E E +
Sbjct: 469 KMLRLGQEGSENERITELQQLLEDANRRNNELETQ 503
>gnl|CDD|222636 pfam14265, DUF4355, Domain of unknown function (DUF4355). This
family of proteins is found in bacteria and viruses.
Proteins in this family are typically between 180 and
214 amino acids in length.
Length = 125
Score = 28.8 bits (65), Expect = 1.4
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 9/57 (15%)
Query: 143 KMSPNEGQE-ELEEVQSDLRKRDDEFEKEALTGDVESGKSYQAQ----TISLLSRVV 194
KMS E E ELE+++ +L + + E + L + + + LL VV
Sbjct: 40 KMSAEEKAEYELEKLEKELEELEAELARRELKAEAKK----MLSEKGLPVELLDLVV 92
>gnl|CDD|224882 COG1971, COG1971, Predicted membrane protein [Function unknown].
Length = 190
Score = 29.1 bits (66), Expect = 1.7
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 120 IWTYYISTVLFIIFGLKMLREGYKMSPNEGQEELEEVQSDLR 161
W ++I VL II GLKM+ EG+K +E + E+ + +
Sbjct: 67 EWAHWIGFVLLIILGLKMIIEGFKNEEDEFVDPAEKHDLNFK 108
>gnl|CDD|224217 COG1298, FlhA, Flagellar biosynthesis pathway, component FlhA [Cell
motility and secretion / Intracellular trafficking and
secretion].
Length = 696
Score = 29.5 bits (67), Expect = 1.8
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 97 YTYSPQVLVLSGAFDMAANIIPRIWTYYISTVLFIIFGLKMLREGYKMSPN-EGQEELEE 155
+P+VL+++ +IP + + F++ + Y +S E Q E +E
Sbjct: 281 LFANPKVLLIAAGVLFLLGLIPGM-----PHLPFLLLAGLLAFLAYLLSKRKEQQAEEKE 335
Query: 156 VQSDLRKRDDEFEKEALTGDV 176
++ K+++E E+E DV
Sbjct: 336 KPAEEAKKEEEEEEEESVDDV 356
>gnl|CDD|218899 pfam06102, DUF947, Domain of unknown function (DUF947). Family of
eukaryotic proteins with unknown function.
Length = 168
Score = 28.8 bits (65), Expect = 2.1
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 133 FGLKMLREGYKMSPNEGQEELEEVQSDLRKRDDEFEKEALTGDVESGKSYQA 184
L R+ YK + ++E+EE++ L+K D EKE L ++S KS
Sbjct: 45 LNLDKFRKNYKFLDDYREKEIEELEKALKKTKDSEEKEELKRTLQSMKSRLK 96
>gnl|CDD|236200 PRK08245, PRK08245, hypothetical protein; Validated.
Length = 240
Score = 28.7 bits (65), Expect = 2.4
Identities = 19/70 (27%), Positives = 21/70 (30%), Gaps = 16/70 (22%)
Query: 192 RVVIQAFTLTF---------LAEWGDR-SQLTTIILAARE------DVYGVTLGGVLGHS 235
R+V AFTL F + D S I D G G G
Sbjct: 48 RMVGPAFTLRFVPAREDLNTPESFADPESPQRAAIETCPPGCVLVVDARGDARAGSFGDI 107
Query: 236 LCTGLAVIGG 245
LCT L G
Sbjct: 108 LCTRLKKRGV 117
>gnl|CDD|233596 TIGR01846, type_I_sec_HlyB, type I secretion system ABC
transporter, HlyB family. Type I protein secretion is a
system in some Gram-negative bacteria to export proteins
(often proteases) across both inner and outer membranes
to the extracellular medium. This is one of three
proteins of the type I secretion apparatus. Targeted
proteins are not cleaved at the N-terminus, but rather
carry signals located toward the extreme C-terminus to
direct type I secretion [Protein fate, Protein and
peptide secretion and trafficking].
Length = 694
Score = 29.3 bits (66), Expect = 2.4
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 35 VAALSVIVVSELGDKTFFIAAIMAMRHPRVTVFIGAIA--ALALMTKFFHHEMLLDKVYV 92
+A SV + ++FI AI+ R V + ++A AL+T ++++DKV V
Sbjct: 113 LATRSVAGKALKFGFSWFIPAIIRYRKQFREVLLISLALQLFALVTPLL-FQVVIDKVLV 171
Query: 93 QCTFYTYSPQVLVLSGAFDMAANIIPRIWTYYISTVLF 130
T S VL+ A M A I + T LF
Sbjct: 172 HRGLSTLS----VLALA--MLAVAIFEPALGGLRTYLF 203
>gnl|CDD|237751 PRK14549, PRK14549, 50S ribosomal protein L29P; Provisional.
Length = 69
Score = 26.5 bits (59), Expect = 3.7
Identities = 10/20 (50%), Positives = 16/20 (80%)
Query: 143 KMSPNEGQEELEEVQSDLRK 162
+MSP E +E+LEE++ +L K
Sbjct: 11 EMSPEEREEKLEELKLELLK 30
>gnl|CDD|217705 pfam03739, YjgP_YjgQ, Predicted permease YjgP/YjgQ family. Members
of this family are predicted integral membrane proteins
of unknown function. They are about 350 amino acids long
and contain about 6 transmembrane regions. They are
predicted to be permeases although there is no
verification of this.
Length = 354
Score = 28.4 bits (64), Expect = 4.0
Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 23/90 (25%)
Query: 51 FFIAAIMAMRHPRVTVFIGAIAALALMTKFFHHEMLLDKVYVQCTFYTYSPQVLVLSGAF 110
+A + + PR G + A+ L ++ ++L
Sbjct: 286 ALLALPLGLGSPRSGRGAGLVLAILLGFLYY----------------------VLLFLGE 323
Query: 111 DMAAN-IIPRIWTYYISTVLFIIFGLKMLR 139
+ N ++P I ++ +LF++ GL +L
Sbjct: 324 ALGENGVLPPILAAWLPNLLFLLLGLYLLL 353
>gnl|CDD|220303 pfam09592, DUF2031, Protein of unknown function (DUF2031). This
protein is expressed in Plasmodium; its function is
unknown. It may be the product of gene family pyst-b.
Length = 228
Score = 28.1 bits (63), Expect = 4.2
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 135 LKMLREGYKMSPNEGQEELEEVQSDL-RKRDDEFE 168
L + + K NE ++ELEEV+ +L KR+ E
Sbjct: 103 LNNVDKKTKKLINELRKELEEVKKELDNKRNGELA 137
>gnl|CDD|182492 PRK10483, PRK10483, tryptophan permease; Provisional.
Length = 414
Score = 28.2 bits (63), Expect = 4.3
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 197 AFTLTFLAEWGDR--SQLTTIILAAREDVYGVTLGGVLGH 234
A + F+ + S++T I+L A+ + +T G +LGH
Sbjct: 135 ALLVAFVVWLSTKAVSRMTAIVLGAKVITFFLTFGSLLGH 174
>gnl|CDD|217443 pfam03234, CDC37_N, Cdc37 N terminal kinase binding. Cdc37 is a
molecular chaperone required for the activity of
numerous eukaryotic protein kinases. This domain
corresponds to the N terminal domain which binds
predominantly to protein kinases and is found N terminal
to the Hsp (Heat shocked protein) 90-binding domain
pfam08565. Expression of a construct consisting of only
the N-terminal domain of Saccharomyces pombe Cdc37
results in cellular viability. This indicates that
interactions with the cochaperone Hsp90 may not be
essential for Cdc37 function.
Length = 172
Score = 27.4 bits (61), Expect = 5.3
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 150 QEELEEVQSDLRKRDDEFEKE 170
+++L++ Q +L K+ DE EKE
Sbjct: 135 RDKLKKEQKELLKKLDELEKE 155
>gnl|CDD|172968 PRK14497, PRK14497, putative molybdopterin biosynthesis protein
MoeA/unknown domain fusion protein; Provisional.
Length = 546
Score = 27.9 bits (62), Expect = 6.0
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 123 YYISTVLF--IIFGLKMLREGYKM-SPNEGQEELEEVQSDLRKRDD 165
YY V F + G L +GY M PNE EE +EV+ DL+K DD
Sbjct: 363 YYALPVPFDSYMVGTFSLTDGYIMLGPNEEIEEGKEVEVDLKKLDD 408
>gnl|CDD|218333 pfam04931, DNA_pol_phi, DNA polymerase phi. This family includes
the fifth essential DNA polymerase in yeast EC:2.7.7.7.
Pol5p is localised exclusively to the nucleolus and
binds near or at the enhancer region of rRNA-encoding
DNA repeating units.
Length = 784
Score = 27.9 bits (62), Expect = 6.2
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 120 IWTYYISTV----LFIIFGLKMLREGYKMSPNEGQEELEEVQSDLRKRDDEFEKEALTGD 175
++TY+I V L +I L +L+ S ++ E EE D + D+ E E +
Sbjct: 612 VFTYFIEDVTNEGLQLI--LDVLKADENKSRHQQLFEGEEEDEDDLEETDDDEDECEAIE 669
>gnl|CDD|239459 cd03343, cpn60, cpn60 chaperonin family. Chaperonins are involved
in productive folding of proteins. They share a common
general morphology, a double toroid of 2 stacked rings.
Archaeal cpn60 (thermosome), together with TF55 from
thermophilic bacteria and the eukaryotic cytosol
chaperonin (CTT), belong to the type II group of
chaperonins. Cpn60 consists of two stacked octameric
rings, which are composed of one or two different
subunits. Their common function is to sequester
nonnative proteins inside their central cavity and
promote folding by using energy derived from ATP
hydrolysis.
Length = 517
Score = 27.6 bits (62), Expect = 6.7
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 140 EGYKMSPNEGQEELEEVQSDLRKRDDE-FEKEALTGDVESGKSYQAQTISLLSRVVIQA 197
EGY+++ + E L+E+ + D + K A T +GK +A L+ +V+ A
Sbjct: 118 EGYRLAAEKALELLDEIAIKVDPDDKDTLRKIAKTS--LTGKGAEA-AKDKLADLVVDA 173
>gnl|CDD|203280 pfam05579, Peptidase_S32, Equine arteritis virus serine
endopeptidase S32. Serine peptidases involved in
processing nidovirus polyprotein.
Length = 425
Score = 27.4 bits (61), Expect = 7.3
Identities = 25/102 (24%), Positives = 36/102 (35%), Gaps = 28/102 (27%)
Query: 52 FIAAIMAMRHPRVTVFIGAIAALALMTKFFHHEMLLDKVYVQCTFYTYSPQVLVLSGAFD 111
F+ ++ + P + IGA+ LAL+ F + +L D VLV G+FD
Sbjct: 296 FLPRVLVVTSPVPFITIGAVHVLALLLSLFKYPLLAD--------------VLVGDGSFD 341
Query: 112 MAANIIPRIWTYYISTVLFIIFGLKMLREGYKMSPNEGQEEL 153
+ F LREG S E L
Sbjct: 342 --------------AAFFLRYFAEGNLREGVSQSCGMTPESL 369
>gnl|CDD|214957 smart00987, UreE_C, UreE urease accessory protein, C-terminal
domain. UreE is a urease accessory protein. Urease
hydrolyses urea into ammonia and carbamic acid. The
C-terminal region of members of this family contains a
His rich Nickel binding site.
Length = 135
Score = 26.8 bits (60), Expect = 7.7
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 5/53 (9%)
Query: 49 KTFFIAAIMAMRHPRVTVFIGAIAALALMTKFFHHEMLLDKVYVQCTFYTYSP 101
+ A I +R P+V V +G AA AL+TK + + + P
Sbjct: 79 PGWLDAEIALLR-PKVIVLLGKTAAKALLTKLIGRL----RGRLPRVLPSPHP 126
>gnl|CDD|226684 COG4231, COG4231, Indolepyruvate ferredoxin oxidoreductase, alpha
and beta subunits [Energy production and conversion].
Length = 640
Score = 27.7 bits (62), Expect = 8.0
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 28 LGFIHAFVAALSVIVVSELGDKTFFIAAIMAMR 60
+G A + +V+ +GD TFF + I+A+
Sbjct: 434 IGIAGGLSFASTKKIVAVIGDSTFFHSGILALI 466
>gnl|CDD|200458 cd11319, AmyAc_euk_AmyA, Alpha amylase catalytic domain found in
eukaryotic Alpha-amylases (also called
1,4-alpha-D-glucan-4-glucanohydrolase). AmyA (EC
3.2.1.1) catalyzes the hydrolysis of alpha-(1,4)
glycosidic linkages of glycogen, starch, related
polysaccharides, and some oligosaccharides. This group
includes eukaryotic alpha-amylases including proteins
from fungi, sponges, and protozoans. The Alpha-amylase
family comprises the largest family of glycoside
hydrolases (GH), with the majority of enzymes acting on
starch, glycogen, and related oligo- and
polysaccharides. These proteins catalyze the
transformation of alpha-1,4 and alpha-1,6 glucosidic
linkages with retention of the anomeric center. The
protein is described as having 3 domains: A, B, C. A is
a (beta/alpha) 8-barrel; B is a loop between the beta 3
strand and alpha 3 helix of A; C is the C-terminal
extension characterized by a Greek key. The majority of
the enzymes have an active site cleft found between
domains A and B where a triad of catalytic residues
(Asp, Glu and Asp) performs catalysis. Other members of
this family have lost the catalytic activity as in the
case of the human 4F2hc, or only have 2 residues that
serve as the catalytic nucleophile and the acid/base,
such as Thermus A4 beta-galactosidase with 2 Glu
residues (GH42) and human alpha-galactosidase with 2 Asp
residues (GH31). The family members are quite extensive
and include: alpha amylase, maltosyltransferase,
cyclodextrin glycotransferase, maltogenic amylase,
neopullulanase, isoamylase, 1,4-alpha-D-glucan
maltotetrahydrolase, 4-alpha-glucotransferase,
oligo-1,6-glucosidase, amylosucrase, sucrose
phosphorylase, and amylomaltase.
Length = 375
Score = 27.5 bits (62), Expect = 8.1
Identities = 14/61 (22%), Positives = 20/61 (32%)
Query: 170 EALTGDVESGKSYQAQTISLLSRVVIQAFTLTFLAEWGDRSQLTTIILAAREDVYGVTLG 229
E GD YQ +L+ + F + G S L I + + TL
Sbjct: 230 EVFDGDPNYVCPYQNYLDGVLNYPLYYPLVDAFQSTKGSMSALVDTINSVQSSCKDPTLL 289
Query: 230 G 230
G
Sbjct: 290 G 290
>gnl|CDD|235654 PRK05957, PRK05957, aspartate aminotransferase; Provisional.
Length = 389
Score = 27.3 bits (61), Expect = 8.4
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Query: 133 FGLKMLREGYKMSPNEGQEELEEVQSDLRKRDDEFEKEALTGDVESGKSYQAQTISLLSR 192
+G R GY + P E ++++Q + + A G ++ GKSY Q + +++
Sbjct: 235 YGFASWRIGYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQ 294
Query: 193 VVIQAFTLTFLAEWGDRSQLTT 214
V + L L + DR L
Sbjct: 295 V--RQILLKSLGQLQDRCTLHP 314
>gnl|CDD|223691 COG0618, COG0618, Exopolyphosphatase-related proteins [General
function prediction only].
Length = 332
Score = 27.3 bits (61), Expect = 9.1
Identities = 14/74 (18%), Positives = 22/74 (29%), Gaps = 21/74 (28%)
Query: 17 HHSSTESPRGDLGFIHAFVAALSVIVVSELGDKTFFIAAIMAMRHPRVTVFIGAIAALAL 76
HH GD +I A + I+ EL + + + A AL
Sbjct: 115 HHPGNNDIYGDFVWIDPSAGATAEIIA-EL---------LKEAGID-----LDPLVATAL 159
Query: 77 M------TKFFHHE 84
+ T F +
Sbjct: 160 LLGIRTDTGRFRYA 173
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.325 0.138 0.398
Gapped
Lambda K H
0.267 0.0756 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 13,416,191
Number of extensions: 1333257
Number of successful extensions: 2278
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2264
Number of HSP's successfully gapped: 67
Length of query: 256
Length of database: 10,937,602
Length adjustment: 95
Effective length of query: 161
Effective length of database: 6,723,972
Effective search space: 1082559492
Effective search space used: 1082559492
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.1 bits)