RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy8308
(311 letters)
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA,
non-ribosomal peptide synthetase, NRPS, adenylation
domain, D-alanylation; HET: AMP; 2.28A {Bacillus
subtilis} PDB: 3e7x_A*
Length = 511
Score = 204 bits (522), Expect = 2e-62
Identities = 60/281 (21%), Positives = 110/281 (39%), Gaps = 33/281 (11%)
Query: 24 QLHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTKAVP 83
+L + +A P A + Q +L TY EL S++ A + +
Sbjct: 2 KLLHAIQTHAETYPQTDAFRSQGQ---SL-----TYQELWEQSDRAA----AAIQKRISG 49
Query: 84 NENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDVTAPEQRVKHILNEARPLLVIA 143
+ + V +I L KAG Y+P+D++ P +R+ I+ + L+I
Sbjct: 50 EK----KSPILVYGHMEPHMIVSFLGSVKAGHPYIPVDLSIPSERIAKIIESSGAELLIH 105
Query: 144 ENEQACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQSNDIAIVLYTSG 203
+ + + + + +S +L ++ + + ++YTSG
Sbjct: 106 AAGLSIDAVGQQIQ-TVSAEELLENEGG----SVSQDQWVKEHE-------TFYIIYTSG 153
Query: 204 STGIPKGVRLPHEVILNRLAWQWATFPYSPSERVGAFKTALTFVDAVSEIWGPLLSARCG 263
STG PKGV++ + + W A FP S + + +F +V +++ L S G
Sbjct: 154 STGNPKGVQISAANLQSFTDWICADFPVSGGKIF-LNQAPFSFDLSVMDLYPCLQS---G 209
Query: 264 GVLII-PRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSMLM 303
G L +D P L L+K + PS ++ LM
Sbjct: 210 GTLHCVTKDAVNKPKVLFEELKKSGLNVWTSTPSFVQMCLM 250
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming
domain, adenylation, D-alanine protein ligase, ATP
complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A*
3dhv_A*
Length = 512
Score = 203 bits (519), Expect = 7e-62
Identities = 66/281 (23%), Positives = 118/281 (41%), Gaps = 34/281 (12%)
Query: 25 LHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTKAV-P 83
L EK AA +PD TA ++ + + TY +L S+ LA H++ ++
Sbjct: 3 LLEQIEKWAAETPDQTAFVWRDA---KI-----TYKQLKEDSDALA----HWISSEYPDD 50
Query: 84 NENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDVTAPEQRVKHILNEARPLLVIA 143
+ V +I L KAG AY+P+D++ P RV+ I + L+++
Sbjct: 51 ------RSPIMVYGHMQPEMIINFLGCVKAGHAYIPVDLSIPADRVQRIAENSGAKLLLS 104
Query: 144 ENEQACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQSNDIAIVLYTSG 203
+L + ++S L+ + + N E + D ++YTSG
Sbjct: 105 ATAVTVTDLPVR---IVSEDNLKDIFFTHKGNTPNPEHAVKGDE-------NFYIIYTSG 154
Query: 204 STGIPKGVRLPHEVILNRLAWQWATFPYSPSERVGAFKTALTFVDAVSEIWGPLLSARCG 263
STG PKGV++ + +++ W F + + +F +V +I+ L++ G
Sbjct: 155 STGNPKGVQITYNCLVSFTKWAVEDFNLQTGQVF-LNQAPFSFDLSVMDIYPSLVT---G 210
Query: 264 GVLII-PRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSMLM 303
G L +D+ P L +LE+ ++ PS LM
Sbjct: 211 GTLWAIDKDMIARPKDLFASLEQSDIQVWTSTPSFAEMCLM 251
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural
genomics, DLTA, ATP-binding, cytoplasm,
nucleotide-binding; 2.41A {Streptococcus pyogenes
serotype M6} PDB: 3lgx_A*
Length = 521
Score = 197 bits (503), Expect = 2e-59
Identities = 62/284 (21%), Positives = 114/284 (40%), Gaps = 36/284 (12%)
Query: 22 EKQLHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTKA 81
K + E+ A D + TY +L S+ +A F+ + A
Sbjct: 3 LKDMIDSIEQFAQTQADFPVYDCLGE---RR-----TYGQLKRDSDSIA----AFIDSLA 50
Query: 82 VPNENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDVTAPEQRVKHILNEARPLLV 141
+ V V A + ++ +A+ K+G AY+P+DV + +R+ I+ A+P L+
Sbjct: 51 LLA-----KSPVLVFGAQTYDMLATFVALTKSGHAYIPVDVHSAPERILAIIEIAKPSLI 105
Query: 142 IAENEQACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQSNDIAIVLYT 201
IA E+ + LS + L+ + + D+N +++T
Sbjct: 106 IAI-EEFPLTIEGISLVSLSEIESAKLAEM-PYERTHS---VKGDDN-------YYIIFT 153
Query: 202 SGSTGIPKGVRLPHEVILNRLAW--QWATFPYSPSERVGAFKTALTFVDAVSEIWGPLLS 259
SG+TG PKGV++ H+ +L+ W + A F ++ + +F +V L
Sbjct: 154 SGTTGQPKGVQISHDNLLSFTNWMIEDAAFDVPKQPQM-LAQPPYSFDLSVMYWAPTLAL 212
Query: 260 ARCGGVLII-PRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSML 302
GG L P+++ + QL T+ + V PS +
Sbjct: 213 ---GGTLFALPKELVADFKQLFTTIAQLPVGIWTSTPSFADMAM 253
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide
synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE;
2.00A {Neotyphodium lolii}
Length = 562
Score = 197 bits (504), Expect = 2e-59
Identities = 54/293 (18%), Positives = 99/293 (33%), Gaps = 32/293 (10%)
Query: 21 KEKQLHRIFEKNAALSPDNTALIFEEQDKDTLVITNE--TYSELNSASNQLARGLLHFLH 78
E A P+ A+ + I E TY +LN +NQ+A + +
Sbjct: 18 STVPPSHYIETWAKTHPEWKAVEVATGFLGSQKIVTEDWTYKKLNETANQVA----NLII 73
Query: 79 TKAVPNENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDVTAPEQRVKHILNEARP 138
++ +AVSL S +++ + K+G Y+P++ P R +L ++R
Sbjct: 74 HASLHGR------AIAVSLDRSLIAFAIIVGIMKSGNTYVPIEAGLPNDRKSFLLRDSRA 127
Query: 139 LLVIAENEQACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQSNDIAIV 198
+ + VL + + + + + A +
Sbjct: 128 AMAFVCDNNFDGVELPPETKVLDTKNQSFIENLSTQDTSDILNNYPENL-------DAYL 180
Query: 199 LYTSGSTGIPKGVRLPHEVILNRLAWQ--------WATFPYSPSERVGAFKTALTFVDAV 250
LYTSGSTG PKGVR+ + + + + + F +
Sbjct: 181 LYTSGSTGTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCL-ASRAFDVHI 239
Query: 251 SEIWGPLLSARCGGVLIIPRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSMLM 303
E++ G + ++ D L T + V +VPSLL +
Sbjct: 240 GEMFLAWRF---GLCAVTGERLSM-LDDLPRTFRELGVTHAGIVPSLLDQTGL 288
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate
forming; HET: PHE AMP; 1.90A {Brevibacillus brevis}
SCOP: e.23.1.1
Length = 563
Score = 196 bits (500), Expect = 1e-58
Identities = 69/284 (24%), Positives = 133/284 (46%), Gaps = 34/284 (11%)
Query: 21 KEKQLHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTK 80
++K +H++FE+ + P+N A++ E + L TY ELN +NQLA K
Sbjct: 37 RDKTIHQLFEEQVSKRPNNVAIVCENE---QL-----TYHELNVKANQLA----RIFIEK 84
Query: 81 AV-PNENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDVTAPEQRVKHILNEARPL 139
+ D +V + + S L +LAV KAG AY+P+D+ P++R+++IL++++
Sbjct: 85 GIGK------DTLVGIMMEKSIDLFIGILAVLKAGGAYVPIDIEYPKERIQYILDDSQAR 138
Query: 140 LVIAENEQACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQSNDIAIVL 199
+++ + + + N+ S +S D+A V+
Sbjct: 139 MLLTQ-KHLVHLIHNIQFNGQVEIFEEDTIKIREGTNLHVPS---------KSTDLAYVI 188
Query: 200 YTSGSTGIPKGVRLPHEVILNRLAWQWATFPYSPSERVGAFKTALTFVDAVSEIWGPLLS 259
YTSG+TG PKG L H+ I N + + + +R+ +++F +V E++ LL+
Sbjct: 189 YTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTEKDRI-GQFASISFDASVWEMFMALLT 247
Query: 260 ARCGGVL-IIPRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSML 302
G L II +D + + + + ++ + L P+ + +
Sbjct: 248 ---GASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVVHLD 288
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein,
ligase phosphoprotein, TER module, phosphopantetheine;
2.60A {Bacillus subtilis}
Length = 1304
Score = 195 bits (499), Expect = 1e-56
Identities = 62/292 (21%), Positives = 109/292 (37%), Gaps = 37/292 (12%)
Query: 13 DTALEKIYKEKQLHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARG 72
A ++ K L F++ +PD AL + Q TL +Y EL+ +N++A
Sbjct: 456 PPAQA--HETKPLTYWFKEAVNANPDAPALTYSGQ---TL-----SYRELDEEANRIA-- 503
Query: 73 LLHFLHTKAV-PNENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDVTAPEQRVKH 131
L +VA+ S L+ +L V KAGAAYLP+D PE R+ +
Sbjct: 504 --RRLQKHGAGK------GSVVALYTKRSLELVIGILGVLKAGAAYLPVDPKLPEDRISY 555
Query: 132 ILNEARPLLVIAENEQACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQ 191
+L ++ ++ E E A T +L ++
Sbjct: 556 MLADSAAACLLTHQEMK-EQAAELPYTGTTLFIDDQTRFEEQASDPATAI---------D 605
Query: 192 SNDIAIVLYTSGSTGIPKGVRLPHEVILNRLAWQWATFPYSPSERVGAFKTALTFVDAVS 251
ND A ++YTSG+TG PKG H I + +S + + F
Sbjct: 606 PNDPAYIMYTSGTTGKPKGNITTHANIQGLVKHV-DYMAFSDQDTF-LSVSNYAFDAFTF 663
Query: 252 EIWGPLLSARCGG-VLIIPRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSML 302
+ + +L+ ++I + ++L + + V + +L +
Sbjct: 664 DFYASMLN---AARLIIADEHTLLDTERLTDLILQENVNVMFATTALFNLLT 712
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier
protei ribosomal peptide synthetase, NRPS, valine
adenylation, LIG; HET: AMP; 2.15A {Pseudomonas
aeruginosa} PDB: 4dg9_A*
Length = 620
Score = 190 bits (486), Expect = 3e-56
Identities = 59/283 (20%), Positives = 102/283 (36%), Gaps = 40/283 (14%)
Query: 21 KEKQLHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTK 80
+ F + AAL P A+ ++ Y +L ++ QL+ +L
Sbjct: 25 AHPTVVARFSEMAALHPHREAIRDRFG---SV-----DYRQLLDSAEQLS----DYLLEH 72
Query: 81 AV-PNENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDVTAPEQRVKHILNEARPL 139
P + V S I LLA+ +G YL +D+ P + +
Sbjct: 73 YPQP------GVCLGVYGEYSRESITCLLAILLSGHHYLYIDLKQPAAWNAELCRQVDCR 126
Query: 140 LVIAENEQACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQSNDIAIVL 199
L++ + G + + L AS +D IA +
Sbjct: 127 LILDCSTTP---TPANGLPCVPVRHLPAAPAS------VARPCFAADQ-------IAYIN 170
Query: 200 YTSGSTGIPKGVRLPHEVILNRLAWQWATFPYSPSERVGAFKTALTFVDAVSEIWGPLLS 259
++SG+TG PK + H I RL + ++P R + L+F A EIWG LL+
Sbjct: 171 FSSGTTGRPKAIACTHAGI-TRLCLGQSFLAFAPQMRF-LVNSPLSFDAATLEIWGALLN 228
Query: 260 ARCGGVLIIPRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSML 302
GG ++ +P L + + + L SL +++
Sbjct: 229 ---GGCCVLNDLGPLDPGVLRQLIGERGADSAWLTASLFNTLV 268
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein
synthetase, PSI-2, protein structure initiative; 2.30A
{Staphylococcus aureus subsp}
Length = 501
Score = 109 bits (275), Expect = 4e-27
Identities = 40/298 (13%), Positives = 94/298 (31%), Gaps = 54/298 (18%)
Query: 25 LHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTKAVPN 84
L K A + + A+ ++ TY L ++ LA+ L
Sbjct: 3 LDFWLYKQAQQNGHHIAITDGQES--------YTYQNLYCEASLLAKRL-------KA-- 45
Query: 85 ENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDV--TAPEQRVKHILNEARPLLVI 142
V + + S I ++ A W A ++ T E + + + L+
Sbjct: 46 --YQQSR-VGLYIDNSIQSIILIHACWLANIEIAMINTRLTPNE--MTNQMRSIDVQLIF 100
Query: 143 AENEQACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQS---------- 192
+ + + L N + + ++ +
Sbjct: 101 CTLPLELRGFQIVSLDDIEFAGRDITTNGLLDNTMGIQYDTSNETVVPKESPSNILNTSF 160
Query: 193 --NDIAIVLYTSGSTGIPKGVRLPHE-VILNRLAWQWATFPYSPSERVGA----FKTA-L 244
+DIA +++TSG+TG K V + + + + + + + + L
Sbjct: 161 NLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCK-ESLGFDRDTNWLSVLPIYHISGL 219
Query: 245 TFVDAVSEIWGPLLSARCGGVLIIPRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSML 302
+ + ++ G + I N +Q++ ++ ++ + LVP L ++
Sbjct: 220 SVL------LRAVIE---GFTVRIVDKF--NAEQILTMIKNERITHISLVPQTLNWLM 266
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase);
ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis}
PDB: 3t5c_A 3t5b_A
Length = 517
Score = 107 bits (269), Expect = 3e-26
Identities = 62/290 (21%), Positives = 106/290 (36%), Gaps = 46/290 (15%)
Query: 25 LHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTKAVPN 84
+ + + A +SP A + D TY+++N+ +N+ A L +
Sbjct: 18 IGWMLRQRATVSPRLQAYVEPSTDVRM------TYAQMNALANRCADVLT----ALGI-- 65
Query: 85 ENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDV--TAPEQRVKHILNEARPLLVI 142
GD VA+ + S + K GA +P++ APE V IL+++ +VI
Sbjct: 66 --AKGDR-VALLMPNSVEFCCLFYGAAKLGAVAVPINTRLAAPE--VSFILSDSGSKVVI 120
Query: 143 AENE-----QACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQSNDIAI 197
A A TV L+ L ++ + D
Sbjct: 121 YGAPSAPVIDAIRAQADPPGTVTDWIGADSLAERLRSAAADEPAVECGGD------DNLF 174
Query: 198 VLYTSGSTGIPKGVRLPHE-VILNRLAWQWATFPYSPSERVGA----FKTALTFVDAVSE 252
++YTSG+TG PKGV HE V +W +T +R+ F A A++
Sbjct: 175 IMYTSGTTGHPKGVVHTHESVHSAASSWA-STIDVRYRDRLLLPLPMFHVA-----ALTT 228
Query: 253 IWGPLLSARCGGVLIIPRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSML 302
+ + G LI ++ + + +V VP++L M
Sbjct: 229 VIFSAMR---GVTLISMPQFD--ATKVWSLIVEERVCIGGAVPAILNFMR 273
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics,
PSI-2, protein S initiative, fatty acid synthesis; HET:
GOL; 2.00A {Rhodopseudomonas palustris}
Length = 509
Score = 104 bits (262), Expect = 2e-25
Identities = 56/287 (19%), Positives = 110/287 (38%), Gaps = 40/287 (13%)
Query: 25 LHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTKAVPN 84
L ++ +NAAL PD TA + + L T+ + + + +LA GLL V
Sbjct: 8 LADVYRRNAALFPDRTAFMVDGV---RL-----THRDYLARAERLASGLLR----DGV-- 53
Query: 85 ENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDV--TAPEQRVKHILNEARPLLVI 142
GD VA+ S +I+++ AV GA LP++ A E + +L + P +V+
Sbjct: 54 --HTGDR-VAILSQNCSEMIELIGAVALIGAILLPVNYRLNADE--IAFVLGDGAPSVVV 108
Query: 143 AENEQACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNE---QSNDIAIVL 199
A + ++ L + S P + + + + D +++
Sbjct: 109 AGTDYR--DIVAGVLPSLGGVKKAYAIGDGSGPFAPFKDLASDTPFSAPEFGAADGFVII 166
Query: 200 YTSGSTGIPKGVRLPHEVILNRLAWQWATFPYSPSERVGAFKTALTFVDA----VSEIWG 255
+T+ G P+G + +L + + + ++ V+ +
Sbjct: 167 HTAAVGGRPRGALISQGNLLIAQSSLVDAWRLTEADVN--------LGMLPLFHVTGLGL 218
Query: 256 PLLSARCGGVLIIPRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSML 302
L + GG +I +P Q +E +KV + +L ++L
Sbjct: 219 MLTLQQAGGASVIAAKF--DPAQAARDIEAHKVTVMAEFAPMLGNIL 263
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel
adenylate-forming EN fold; HET: MCA AMP; 1.43A
{Streptomyces coelicolor} PDB: 3nyr_A*
Length = 505
Score = 100 bits (252), Expect = 4e-24
Identities = 46/213 (21%), Positives = 80/213 (37%), Gaps = 38/213 (17%)
Query: 25 LHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTKAVPN 84
+ D AL F E+ +L TY+EL +A+ A +
Sbjct: 25 FPALSPAPTGAPADRPALRFGER---SL-----TYAELAAAAGATAGRI----------- 65
Query: 85 ENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDVTAPEQRVKHILNEARPLLVIAE 144
VAV P+ ++A AG A +PL+ + ++ + HIL+++ P LV+A
Sbjct: 66 --GGAGR-VAVWATPAMETGVAVVAALLAGVAAVPLNPKSGDKELAHILSDSAPSLVLAP 122
Query: 145 NEQACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQSNDIAIVLYTSGS 204
+ +L L + + E D A+V+YTSG+
Sbjct: 123 PDAE---------LPPALGALERVDVDVRARGAVPEDGADDG-------DPALVVYTSGT 166
Query: 205 TGIPKGVRLPHEVILNRLAWQWATFPYSPSERV 237
TG PKG +P + L + ++ + +
Sbjct: 167 TGPPKGAVIPRRALATTLDALADAWQWTGEDVL 199
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA
ligase; 1.84A {Burkholderia xenovorans}
Length = 529
Score = 100 bits (252), Expect = 6e-24
Identities = 49/291 (16%), Positives = 87/291 (29%), Gaps = 39/291 (13%)
Query: 25 LHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTKAVPN 84
+ TA I + TY EL + + A L T V
Sbjct: 25 FAAYLFRLNETRAGKTAYIDDTGST--------TYGELEERARRFA----SALRTLGV-- 70
Query: 85 ENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDV--TAPEQRVKHILNEARPLLVI 142
+ + + + + L L AG + + T + ++L + VI
Sbjct: 71 --HPEER-ILLVMLDTVALPVAFLGALYAGVVPVVANTLLTPAD--YVYMLTHSHARAVI 125
Query: 143 AENEQACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHS---------DNNNEQSN 193
A +N+ + +L+ + + + +
Sbjct: 126 ASGALV-QNVT-QALESAEHDGCQLIVSQPRESEPRLAPLFEELIDAAAPAAKAAATGCD 183
Query: 194 DIAIVLYTSGSTGIPKGVRLPHEVIL-NRLAWQWATFPYSPSERV-GAFKTALTFVDAVS 251
DIA LY+SGSTG PKG H + + + ++ V A K +
Sbjct: 184 DIAFWLYSSGSTGKPKGTVHTHANLYWTAELYAKPILGIAENDVVFSAAKLFFAY----- 238
Query: 252 EIWGPLLSARCGGVLIIPRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSML 302
+ L G I D + L +++ VP+L +ML
Sbjct: 239 GLGNGLTFPLSVGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANML 289
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase
domain alternation confo change; 2.00A {Alcaligenes SP}
SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X*
2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Length = 504
Score = 100 bits (251), Expect = 6e-24
Identities = 44/290 (15%), Positives = 98/290 (33%), Gaps = 46/290 (15%)
Query: 25 LHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTKAVPN 84
++ + + A +PD+ AL + T++EL + +A L +
Sbjct: 4 VNEMLRRAATRAPDHCALAVPARGLRL------THAELRARVEAVAARLH----ADGL-- 51
Query: 85 ENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDV--TAPEQRVKHILN--EARPLL 140
+ VAV S+ ++ +LA+ + GA L+ + E + ++ E +
Sbjct: 52 --RPQQR-VAVVAPNSADVVIAILALHRLGAVPALLNPRLKSAE--LAELIKRGEMTAAV 106
Query: 141 VIAENEQA-CENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQSNDIAIVL 199
+ + A + G ++ L L S+ + A +
Sbjct: 107 IAVGRQVADAIFQSGSGARIIFLGDLVRDGEPYSYGPPIEDPQREPA-------QPAFIF 159
Query: 200 YTSGSTGIPKGVRLPHEVILNRLAW--QWATFPYSPSERVGA----FKTA-LTFVDAVSE 252
YTSG+TG+PK +P +R+ + + V +
Sbjct: 160 YTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFF------- 212
Query: 253 IWGPLLSARCGGVLIIPRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSML 302
+ + G ++ + P + +++ +V L P+ L ++
Sbjct: 213 -AVLVAALALDGTYVVVEEF--RPVDALQLVQQEQVTSLFATPTHLDALA 259
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure
initiative, PSI-II, NYSGXRC, 11193J, structural
genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Length = 549
Score = 99.2 bits (248), Expect = 2e-23
Identities = 56/298 (18%), Positives = 108/298 (36%), Gaps = 43/298 (14%)
Query: 19 IYKEKQLHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLH 78
Y + L + A + TA+I E + + + E+ + +LA G+
Sbjct: 15 YYPKISLADRIDAAAEKFGEKTAIISAEPKFPSEFPESMNFLEICEVTKKLASGISRKGV 74
Query: 79 TKAVPNENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDV--TAPEQRVKHILNEA 136
K G+H V V + S + + A+W+ A +P++ + E ++HILN++
Sbjct: 75 RK--------GEH-VGVCIPNSIDYVMTIYALWRVAATPVPINPMYKSFE--LEHILNDS 123
Query: 137 RPLLVIAENEQACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQS---- 192
++ L + VL + + + ++ S + + ++
Sbjct: 124 EATTLVVH-----SMLYENFKPVLEKTGVERV-FVVGGEVNSLSEVMDSGSEDFENVKVN 177
Query: 193 --NDIAIVLYTSGSTGIPKGVRLPHEVILNRLAWQWATFPYSPSERVGAF-----KTALT 245
D+A++ YT G+TG+PKGV L H + S + +
Sbjct: 178 PEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVATGLSHMDTIVGCMPMFHSAEFG 237
Query: 246 FVDAVSEIWGPLLSARCGG-VLIIPRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSML 302
V L G +++ N + L +EKYK VP L ++
Sbjct: 238 LV---------NLMVTVGNEYVVMGM---FNQEMLAENIEKYKGTFSWAVPPALNVLV 283
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase
like fold, AMP-binding; 2.05A {Mycobacterium
tuberculosis} PDB: 3e53_A
Length = 480
Score = 95.5 bits (238), Expect = 3e-22
Identities = 46/281 (16%), Positives = 88/281 (31%), Gaps = 40/281 (14%)
Query: 25 LHRIFEKNAALSPDNTALIFEEQDKDTLVITNE-TYSELNSASNQLARGLLHFLHTKAVP 83
L A L P + A F + ++D + T+S+L + +A+ L T
Sbjct: 26 LPAALRACARLQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGST---- 81
Query: 84 NENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDVTAPEQ---RVKHILNEARPLL 140
GD V +S + L +AG +PL V R +L+++ P+
Sbjct: 82 -----GDR-VVISAPQGLEYVVAFLGALQAGRIAVPLSVPQGGVTDERSDSVLSDSSPVA 135
Query: 141 VIAENEQACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQSNDIAIVLY 200
++ + +++ ++ L + P D + A + Y
Sbjct: 136 ILTTSSAV-DDVVQHVARRPGESPPSIIEVDLLDLDAPNGYTFKED----EYPSTAYLQY 190
Query: 201 TSGSTGIPKGVRLPHEVILNRLAWQWATFPYSPSERVGAFKTALTFVDAVSEIWGPL--- 257
TSGST P GV + H+ + + + ++ W P
Sbjct: 191 TSGSTRTPAGVVMSHQNVRVNFEQLMSGYFADTDGIPPPNSALVS--------WLPFYHD 242
Query: 258 ----------LSARCGGVLIIPRDVTRNPDQLIGTLEKYKV 288
+ VL P + P + + +
Sbjct: 243 MGLVIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDFH 283
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl
adenylate, structural genom 2, protein structure
initiative; HET: 1ZZ; 1.85A {Legionella pneumophila
subsp} PDB: 3lnv_A*
Length = 590
Score = 95.1 bits (237), Expect = 5e-22
Identities = 61/280 (21%), Positives = 106/280 (37%), Gaps = 47/280 (16%)
Query: 25 LHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTKAVPN 84
L + A SP+ + F ++ + + TY +L+ + +A L A P
Sbjct: 13 LVDVVRLRALHSPNKKSCTFLNKELEETM----TYEQLDQHAKAIAATLQA---EGAKP- 64
Query: 85 ENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDVTAPEQ---RVKHILNEARPLLV 141
GD V + AP LIQ L AG +P+ A E+ + + I+ ++P++V
Sbjct: 65 ----GDR-VLLLFAPGLPLIQAFLGCLYAGCIAVPIYPPAQEKLLDKAQRIVTNSKPVIV 119
Query: 142 IAENEQACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQSNDIAIVLYT 201
+ + + A + T ++ ++ N S SNDIA + YT
Sbjct: 120 LMIADHIKKFTADELNTNPKFLKIPAIALESIELNRSSSWQPTSIK----SNDIAFLQYT 175
Query: 202 SGSTGIPKGVRLPHEVILNRLAWQWATFPYSPSERVGAFKTALTFVDAVSEIWGPL---- 257
SGST PKGV + H +L+ L + +F + + S W P
Sbjct: 176 SGSTMHPKGVMVSHHNLLDNLNKIFTSFHMNDETII------------FS--WLPPHHDM 221
Query: 258 ---------LSARCGGVLIIPRDVTRNPDQLIGTLEKYKV 288
+ +++ P +NP + + KYK
Sbjct: 222 GLIGCILTPIYGGIQAIMMSPFSFLQNPLSWLKHITKYKA 261
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase;
HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB:
4fut_A*
Length = 503
Score = 92.6 bits (231), Expect = 3e-21
Identities = 55/284 (19%), Positives = 108/284 (38%), Gaps = 50/284 (17%)
Query: 32 NAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTKAVPNENQDGDH 91
+ P A+ D + +Y+EL + + ++A L+ + + Q GD
Sbjct: 11 DKLDDPHKLAIETA--AGDKI-----SYAELVARAGRVANVLVA----RGL----QVGDR 55
Query: 92 IVAVSLAPSSGLIQVLLAVWKAGAAYLPLDV--TAPEQRVKHILNEARPLLVIAENE--- 146
VA S + + LA +AG YLPL+ T E + + + +A P +V+ +
Sbjct: 56 -VAAQTEKSVEALVLYLATVRAGGVYLPLNTAYTLHE--LDYFITDAEPKIVVCDPSKRD 112
Query: 147 ---QACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQSNDIAIVLYTSG 203
+ T+ + L A+ + +D D+A +LYTSG
Sbjct: 113 GIAAIAAKVGATVETLGPDGRGSLTDAAAGASEAFATIDRGAD-------DLAAILYTSG 165
Query: 204 STGIPKGVRLPHEVILNRLAWQWATFPYSPSERVGA----FKT-ALTFVDAVSEIWGPLL 258
+TG KG L H+ + + + ++P + + + T L +
Sbjct: 166 TTGRSKGAMLSHDNLASNSLTLVDYWRFTPDDVLIHALPIYHTHGLF--------VASNV 217
Query: 259 SARCGGVLIIPRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSML 302
+ G +I +PD+++ + + L+ VP+ +L
Sbjct: 218 TLFARGSMIFLPKF--DPDKILDLMA--RATVLMGVPTFYTRLL 257
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain
acyl-COA synthetase, xenobiotic/medium-chain FA COA
ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A
3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Length = 570
Score = 90.8 bits (226), Expect = 2e-20
Identities = 48/299 (16%), Positives = 98/299 (32%), Gaps = 61/299 (20%)
Query: 30 EKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTKAVPNENQDG 89
+ A P + AL + L+ + EL+ S Q A L + G
Sbjct: 50 MEKAGKRPPSPALWWVNGKGKELMWN---FRELSENSQQAANVLSGACGLQR-------G 99
Query: 90 DHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDVTAPEQRVKHILNEARPLLVIAENEQAC 149
D VAV L V+L +AG ++P + + + L ++ ++A +E
Sbjct: 100 DR-VAVVLPRVPEWWLVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVI- 157
Query: 150 ENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQ-----SNDIAIVLYTSGS 204
+ + SL L+S + + +L+ + S + + + +TSG+
Sbjct: 158 QEVDTVASECPSLRIKLLVSEKSCDGWLNFKKLLNEASTTHHCVETGSQEASAIYFTSGT 217
Query: 205 TGIPKGVRLPH-------------------EVILNRLAWQWATFPYSPSERVGAFKTALT 245
+G+PK + +++ W
Sbjct: 218 SGLPKMAEHSYSSLGLKAKMDAGWTGLQASDIMWTISDTGWILNILCS------------ 265
Query: 246 FVDAVSEIWGPLLSARCGGVLIIPRDVTR-NPDQLIGTLEKYKVERLVLVPSLLRSMLM 303
+ P G + + +P ++ TL Y ++ ++ P + R ML+
Sbjct: 266 -------LMEPWAL----GACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYR-MLL 312
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate
synthetase, isochroismatase...; adenylate-forming
enzymes, ANL superfamily; HET: SVS PNS; 3.10A
{Escherichia coli}
Length = 617
Score = 90.8 bits (226), Expect = 2e-20
Identities = 54/295 (18%), Positives = 101/295 (34%), Gaps = 41/295 (13%)
Query: 20 YKEKQLHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHT 79
+++ L I ++AA D+ A+I E+ L +Y ELN A++ LA L
Sbjct: 24 WQDLPLTDILTRHAA--SDSIAVIDGER---QL-----SYRELNQAADNLACSLRR-QGI 72
Query: 80 KAVPNENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDV--TAPEQRVKHILNEAR 137
K G+ V L + L A+ K G A + E + ++
Sbjct: 73 KP-------GET-ALVQLGNVAELYITFFALLKLGVAPVLALFSHQRSE--LNAYASQIE 122
Query: 138 P-LLVIAENEQACENLAYKGRTVLSLPQLRLL-----SASLSHNNIPGESMLHSDNNNEQ 191
P LL+ + V +R++ S + +
Sbjct: 123 PALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDSGEHNLQDAINHPAEDFTATPSP 182
Query: 192 SNDIAIVLYTSGSTGIPKGVRLPHEVILNRLAWQWATFPYSPSERVGAFKTAL----TFV 247
++++A + G+TG PK + H + ++ R A+ +
Sbjct: 183 ADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFTQQTRYLC---AIPAAHNYA 239
Query: 248 DAVSEIWGPLLSARCGGVLIIPRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSML 302
+ G L+ GG +++ D + +EK++V LVP + L
Sbjct: 240 MSSPGSLGVFLA---GGTVVLAADP--SATLCFPLIEKHQVNVTALVPPAVSLWL 289
>3o83_A Peptide arylation enzyme; ligase, adenylation of
2,3-dihydroxybenzoate and transfer to pantetheine
cofactor of BASF; HET: IXN; 1.90A {Acinetobacter
baumannii} PDB: 3o82_A* 3o84_A*
Length = 544
Score = 88.0 bits (219), Expect = 1e-19
Identities = 56/297 (18%), Positives = 105/297 (35%), Gaps = 41/297 (13%)
Query: 20 YKEKQLHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHT 79
+ ++ L RI P + A+I E+ L +Y EL+ S LA L
Sbjct: 27 WIDQPLTRILTVGVQSHPHSLAIICGER---QL-----SYIELDRLSTNLATRLAE---- 74
Query: 80 KAVPNENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDV--TAPEQRVKHILNEAR 137
K + GD V L + V A+ KAG L E + + + +
Sbjct: 75 KGL----GKGDT-ALVQLPNVAEFYIVFFALLKAGVVVLNALYSHRQYE--LNAFIKQIQ 127
Query: 138 P-LLVIAENEQACENLAYKGRTVLSLPQLRLL-------SASLSHNNIPGESMLHSDNNN 189
P LL+ + + N + ++ + + I + D ++
Sbjct: 128 PKLLIGSRQHEVFSNNQFIDSLHDVNLSPEIILMLNHQATDFGLLDWIETPAETFVDFSS 187
Query: 190 EQSNDIAIVLYTSGSTGIPKGVRLPHEVILNRLAWQWATFPYSPSERVGAFKTAL----T 245
++++A + GSTG PK + H + + + R+ AL
Sbjct: 188 TPADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEICGLNSNTRLLC---ALPAPHN 244
Query: 246 FVDAVSEIWGPLLSARCGGVLIIPRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSML 302
F+ + G L + GG +++ + P +++++V LVPS + L
Sbjct: 245 FMLSSPGALGVLHA---GGCVVMAPNP--EPLNCFSIIQRHQVNMASLVPSAVIMWL 296
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide
synthetase, antibiotic biosynthesis, siderophore
formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP:
e.23.1.1 PDB: 1md9_A* 1mdf_A
Length = 539
Score = 86.0 bits (214), Expect = 6e-19
Identities = 55/293 (18%), Positives = 106/293 (36%), Gaps = 37/293 (12%)
Query: 20 YKEKQLHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHT 79
+ + + AA D A+ +Y EL++ +++LA G L
Sbjct: 22 WAGETFGDLLRDRAAKYGDRIAITCGNT---HW-----SYRELDTRADRLAAGFQK-LGI 72
Query: 80 KAVPNENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDV--TAPEQRVKHILNEAR 137
+ D V V L +V+ A+++ GA + + E + + A
Sbjct: 73 QQ-------KDR-VVVQLPNIKEFFEVIFALFRLGALPVFALPSHRSSE--ITYFCEFAE 122
Query: 138 P-LLVIAENEQACENLAYKGRTVLSLPQLR-LLSASLSHNNIPGESMLHSDNNNEQ--SN 193
+I + + + + LP L+ ++ A + +P E + + S+
Sbjct: 123 AAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAEEFLPLEDLHTEPVKLPEVKSS 182
Query: 194 DIAIVLYTSGSTGIPKGVRLPHEVILNRLAWQWATFPYSPSERVGAFKTAL----TFVDA 249
D+A + + GSTG+ K + H+ + L S A AL + +
Sbjct: 183 DVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLA---ALPMAHNYPLS 239
Query: 250 VSEIWGPLLSARCGGVLIIPRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSML 302
+ G L + GG +++ +PD +E+ KV LVP L +
Sbjct: 240 SPGVLGVLYA---GGRVVLSPSP--SPDDAFPLIEREKVTITALVPPLAMVWM 287
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase,
ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina
acetivorans}
Length = 580
Score = 85.3 bits (212), Expect = 1e-18
Identities = 52/324 (16%), Positives = 98/324 (30%), Gaps = 101/324 (31%)
Query: 28 IFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTKAVPNENQ 87
+ + A SP+ A+I+ + + + T + +L S++ A +F +
Sbjct: 61 VVDVYARDSPEKLAMIWCDDYGNEKIFT---FKDLKYYSDKAA----NFFVKHGI----G 109
Query: 88 DGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPL-------D-------------VTAPEQ 127
GD+ V ++L +L + K GA +P D V E
Sbjct: 110 KGDY-VMLTLKSRYDFWYCMLGLHKLGAIAVPATHMLKTRDIVYRIEKAGLKMIVCIAED 168
Query: 128 RVKHILNEARPLLVIAENEQACENLAYKGRTV--------LSLPQLRLLSASLSHNNIPG 179
V ++EA C ++ K V + + L +S G
Sbjct: 169 DVPEQVDEAHA---------ECGDIPLKKAKVGGDVLEGWIDFRKE-LEESSPIFERPTG 218
Query: 180 ESMLHSDNNNEQSNDIAIVLYTSGSTGIPKGVRLPH-------------------EVILN 220
E ++ DI +V ++SG+ G PK V + +
Sbjct: 219 EVSTKNE-------DICLVYFSSGTAGFPKMVEHDNTYPLGHILTAKYWQNVEDDGLHYT 271
Query: 221 RLAWQWATFPYSPSERVGAFKTALTFVDAVSEIWGPLLSARCGGVLIIPRDVTR-NPDQL 279
W + ++G ++ G + D R +
Sbjct: 272 VADSGWGKCVWGK-------------------LYGQWIA----GCAVFVYDYDRFEAKNM 308
Query: 280 IGTLEKYKVERLVLVPSLLRSMLM 303
+ KY V P++ R L+
Sbjct: 309 LEKASKYGVTTFCAPPTIYR-FLI 331
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL
EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Length = 536
Score = 84.9 bits (211), Expect = 1e-18
Identities = 62/320 (19%), Positives = 111/320 (34%), Gaps = 52/320 (16%)
Query: 1 MDPNYLSILKGRDTALEKIYKEKQLHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYS 60
M+P I + + + I K LH +N + LI TY+
Sbjct: 1 MNPQEEFIFRSKLPDIY-IPKNLPLHSYVLENLSNHSSKPCLINGANGDVY------TYA 53
Query: 61 ELNSASNQLARGLLHFLHTKAVPNENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPL 120
++ + ++A GL + GD + + L S + L GA
Sbjct: 54 DVELTARRVASGLNKIGIQQ--------GDV-IMLFLPSSPEFVLAFLGASHRGAIITAA 104
Query: 121 DV--TAPEQRVKHILNEARPLLVIAENEQACENLAYKGRTVLSLPQLR-LLSASLSHNNI 177
+ T E + +R L+I K + ++ + S +
Sbjct: 105 NPFSTPAE--LAKHAKASRAKLLIT-----QACYYEKVKDFARESDVKVMCVDSAPDGCL 157
Query: 178 PGESMLHSDNNNEQS-----NDIAIVLYTSGSTGIPKGVRLPHE-VILNRL---AWQWAT 228
+ +D N +D+ + Y+SG+TG+PKGV L H+ +I +
Sbjct: 158 HFSELTQADENEAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPN 217
Query: 229 FPYSPSERVGAF-----KTALTFVDAVSEIWGPLLSARCGG-VLIIPRDVTRNPDQLIGT 282
+ + + AL + L R G +LI+P+ L+G
Sbjct: 218 LYFHSEDVILCVLPMFHIYALNSI--------MLCGLRVGAPILIMPK---FEIGSLLGL 266
Query: 283 LEKYKVERLVLVPSLLRSML 302
+EKYKV +VP ++ S+
Sbjct: 267 IEKYKVSIAPVVPPVMMSIA 286
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme
family,, structural genomics, PSI-2, protein structure
initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB:
3pbk_A*
Length = 576
Score = 82.7 bits (205), Expect = 9e-18
Identities = 58/285 (20%), Positives = 94/285 (32%), Gaps = 57/285 (20%)
Query: 25 LHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTKAVPN 84
L + A S Q +D L Y L + + A+ LL K
Sbjct: 23 LVDALDYAALSSAGMNFYDRRCQLEDQL-----EYQTLKARAEAGAKRLLSLNLKK---- 73
Query: 85 ENQDGDHIVAVSLAPSSGLIQVLLAVWKAGA----AYLPLDVTAPEQ---RVKHILNEAR 137
GD VA+ SS ++ A AG +P+ V + +++ +L +
Sbjct: 74 ----GDR-VALIAETSSEFVEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLASCQ 128
Query: 138 PLLVIAENEQACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQSNDIAI 197
P +I +E P+L +LS + + L NDIA
Sbjct: 129 PAAIITGDEWL----PLVNAATHDNPELHVLSHAWFKALPEADVALQR----PVPNDIAY 180
Query: 198 VLYTSGSTGIPKGVRLPHEVIL-NRLAWQWATFPYSPSERVGAFKTALTFVDAVSEIWGP 256
+ YTSGST P+GV + H ++ N A P +R VS W P
Sbjct: 181 LQYTSGSTRFPRGVIITHREVMANLRAISHDGIKLRPGDRC------------VS--WLP 226
Query: 257 L-------------LSARCGGVLIIPRDVTRNPDQLIGTLEKYKV 288
++ + + +D P Q + + K +
Sbjct: 227 FYHDMGLVGFLLTPVATQLSVDYLRTQDFAMRPLQWLKLISKNRG 271
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase,
photoprotein, luminescence, aspulvinone, natural product
extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A
1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A
Length = 550
Score = 81.9 bits (203), Expect = 1e-17
Identities = 55/302 (18%), Positives = 104/302 (34%), Gaps = 61/302 (20%)
Query: 31 KNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTKAVPNENQDGD 90
K AL P A + + TY+E S +LA + +
Sbjct: 31 KRYALVPGTIAFTDAHIEVNI------TYAEYFEMSVRLAEAMKRYGLNT--------NH 76
Query: 91 HIVAVSLAPSSGLIQ---VLLAVWKAGAAYLPLDV--TAPEQRVKHILNEARPLLVIAEN 145
+ V + +S +Q +L G A P + E + + +N ++P +V
Sbjct: 77 R-IVV-CSENS--LQFFMPVLGALFIGVAVAPANDIYNERE--LLNSMNISQPTVVFVSK 130
Query: 146 E------QACENLAYKGRTVL------SLPQLRLLSASLSHNNIPGESMLHSDNNNEQSN 193
+ + L + ++ + + SH + ++
Sbjct: 131 KGLQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVTSHLPPGFNEYDFVPESFDRDK 190
Query: 194 DIAIVLYTSGSTGIPKGVRLPHE-VILNRLAWQWATFP--YSPSERVGAF-----KTALT 245
IA+++ +SGSTG+PKGV LPH + + F P + + +
Sbjct: 191 TIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFHHGFGMF 250
Query: 246 FVDAVSEIWGPLLSARCGG-VLIIPRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSMLMF 304
L CG V+++ R + + +L+ YK++ +LVP+L F
Sbjct: 251 TT---------LGYLICGFRVVLMYR---FEEELFLRSLQDYKIQSALLVPTL---FSFF 295
Query: 305 LK 306
K
Sbjct: 296 AK 297
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel,
alpha+beta, riken structural genomics/proteomics
initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata}
PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Length = 548
Score = 76.9 bits (190), Expect = 7e-16
Identities = 48/311 (15%), Positives = 104/311 (33%), Gaps = 55/311 (17%)
Query: 20 YKEKQLHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHT 79
+E K A+ F +Y+E S L + L ++
Sbjct: 20 IEEGSAGTQLRKYMERYAKLGAIAFTNAVTGVDY----SYAEYLEKSCCLGKALQNYGLV 75
Query: 80 KAVPNENQDGDHIVAVSLAPSSGLIQ---VLLAVWKAGAAYLPLDVTAPEQRVKHILNEA 136
+A+ + + + ++A G P + + + H L +
Sbjct: 76 V--------DGR-IAL-CSENC--EEFFIPVIAGLFIGVGVAPTNEIYTLRELVHSLGIS 123
Query: 137 RPLLVIAENE------QACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNN- 189
+P +V + + + + V+ ++ I + ++
Sbjct: 124 KPTIVFSSKKGLDKVITVQKTVTTIKTIVILDSKVDYRGYQCLDTFIKRNTPPGFQASSF 183
Query: 190 -----EQSNDIAIVLYTSGSTGIPKGVRLPHE-VILNRLAWQWATFP--YSPSERVGAF- 240
++ +A+++ +SGSTG+PKGV+L HE ++ + + SP V
Sbjct: 184 KTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVV 243
Query: 241 ----KTALTFVDAVSEIWGPLLSARCGG-VLIIPRDVTRNPDQLIGTLEKYKVERLVLVP 295
+ L CG V+++ + + + + TL+ YK ++LVP
Sbjct: 244 PFHHGFGMFTT---------LGYLICGFRVVMLTK---FDEETFLKTLQDYKCTSVILVP 291
Query: 296 SLLRSMLMFLK 306
+L + K
Sbjct: 292 TL---FAILNK 299
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase;
transferase; 3.10A {Arabidospis thaliana}
Length = 979
Score = 73.5 bits (181), Expect = 1e-14
Identities = 51/303 (16%), Positives = 101/303 (33%), Gaps = 52/303 (17%)
Query: 25 LHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTKAVPN 84
LH +N + LI TYS+++ S Q+A +
Sbjct: 63 LHDYIFQNISEFATKPCLINGPTGHVY------TYSDVHVISRQIAANFHKLGVNQ---- 112
Query: 85 ENQDGDHIVAVSLAPSSGLIQ---VLLAVWKAGAAYLPLDV--TAPEQRVKHILNEARPL 139
D +V + L P+ + LA GA + T E + +
Sbjct: 113 ----ND-VVML-LLPNC--PEFVLSFLAASFRGATATAANPFFTPAE--IAKQAKASNTK 162
Query: 140 LVIAENEQACENLAYKGRTVLSLPQLRLLS---ASLSHNNIPGESMLHSDNNNEQS---- 192
L+I E + + + + + + + + S +
Sbjct: 163 LIITEARYV--DKIKPLQNDDGVVIVCIDDNESVPIPEGCLRFTELTQSTTEASEVIDSV 220
Query: 193 ----NDIAIVLYTSGSTGIPKGVRLPHE----VILNRLAWQWATFPYSPSERVGAFKTAL 244
+D+ + Y+SG+TG+PKGV L H+ + ++ + + + + L
Sbjct: 221 EISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCV---L 277
Query: 245 TFVDAVSEIWGPLLSARCGG-VLIIPRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSMLM 303
+ L R G +LI+P+ + L+ +++ KV +VP + +L
Sbjct: 278 PMFHIYALNSIMLCGLRVGAAILIMPK---FEINLLLELIQRCKVTVAPMVPPI---VLA 331
Query: 304 FLK 306
K
Sbjct: 332 IAK 334
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea
agglomerans} PDB: 3hgv_A 3l2k_A*
Length = 369
Score = 56.7 bits (136), Expect = 3e-09
Identities = 30/130 (23%), Positives = 48/130 (36%), Gaps = 20/130 (15%)
Query: 193 NDIAIVLYTSGSTGIPKGVRLPHEVILNRLAWQWATFPYSPSER----VGAFKTALTFVD 248
+ V + G+TG PK V I ++W+ + + + P + A T V
Sbjct: 91 DSHPQVYESGGTTGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVG 150
Query: 249 AVSEIWGPLLSARCGGVLIIPRDVTR----------------NPDQLIGTLEKYKVERLV 292
A+++ L + I PR V R DQ+ TL + LV
Sbjct: 151 AINKERALRLGGMFFSIDIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLV 210
Query: 293 LVPSLLRSML 302
P +LR +L
Sbjct: 211 TTPPVLRELL 220
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 55.1 bits (132), Expect = 1e-08
Identities = 59/316 (18%), Positives = 94/316 (29%), Gaps = 137/316 (43%)
Query: 3 PNY-LSILKGRDTALEKIYKEKQLHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSE 61
P+ LSI + E++ + + N+ L I +LV
Sbjct: 335 PSPMLSI---SNLTQEQVQD-----YVNKTNSHLPAGKQVEI-------SLV-------- 371
Query: 62 LNSASN--------QLARGL-LHFLHTKAVPNENQDGDHIVAVSLAPSSGLIQVLLAVWK 112
N A N L GL L KA +Q S P S + L
Sbjct: 372 -NGAKNLVVSGPPQSL-YGLNLTLRKAKAPSGLDQ--------SRIPFS---ERKLKF-- 416
Query: 113 AGAAYLPLDVTAPEQRVKH--ILNEARPLLVIAENEQACENLAYKGRTVLSLPQ------ 164
+LP V +P H +L A L+ + N+++ + + +P
Sbjct: 417 -SNRFLP--VASPF----HSHLLVPASDLI---NKDLVKNNVSFNAKD-IQIPVYDTFDG 465
Query: 165 --LRLLSASLSHNNIPGESMLHSDNNNEQSNDIAIVLYTSGSTGIPKGVRLPHEVILNRL 222
LR+LS S+S + I+ RLP +
Sbjct: 466 SDLRVLSGSISERIVD-----------------CII-------------RLP-------V 488
Query: 223 AWQWATFPYSPSERVGAFKTALTFVDAVSEIWGPLLSARCG----------GV-LIIPRD 271
W+ T A +D +GP ++ G GV +I+
Sbjct: 489 KWETTTQ-----------FKATHILD-----FGPGGASGLGVLTHRNKDGTGVRVIVAGT 532
Query: 272 VTRNPDQLIGTLEKYK 287
+ NPD G +K
Sbjct: 533 LDINPDDDYG----FK 544
Score = 36.6 bits (84), Expect = 0.010
Identities = 49/311 (15%), Positives = 82/311 (26%), Gaps = 107/311 (34%)
Query: 24 QLHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYS--ELNSASNQLARGLLHFLHTKA 81
QL F K + A D +E + EL + + L ++ +
Sbjct: 32 QLQEQFNKILPEPTEGFA-----AD-------DEPTTPAEL------VGK-FLGYVSSLV 72
Query: 82 VPNENQDGDHIVAVSLAP--SSGL----IQVLLAVWKAGAAYLPLDVTAPEQRVKHILNE 135
P++ D ++ + L + L I L AA L + + K ++
Sbjct: 73 EPSKVGQFDQVLNLCLTEFENCYLEGNDIHAL-------AAKLLQENDTTLVKTKELI-- 123
Query: 136 ARPLLVIAENEQACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQSNDI 195
+ R + P + S L + +
Sbjct: 124 -----------KN----YITARIMAKRPFDK-----------KSNSALFRAVGEGNAQLV 157
Query: 196 AIVLYTSGSTGIPKGVRLPHEVILNRLAWQWATFPYSPSERVGAFKTALTFVDAVSEIWG 255
AI G G + L + T Y VG + +E
Sbjct: 158 AIF----GGQGNT-------DDYFEELRDLYQT--YHV--LVGD------LIKFSAETLS 196
Query: 256 PLLSARCGGVLIIPR--DVT---RNPDQ---------------LIG--TLEKYKV--ERL 291
L+ + + ++ NP LIG L Y V + L
Sbjct: 197 ELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLL 256
Query: 292 VLVPSLLRSML 302
P LRS L
Sbjct: 257 GFTPGELRSYL 267
Score = 35.0 bits (80), Expect = 0.034
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 33/137 (24%)
Query: 6 LSILKGRDTALEKIYKEKQLHRIFEKNAALSPDNTALIFEEQDKDTLV--ITNETYSELN 63
+ ++ R ++ +L R A++P A F ++ +V + T +
Sbjct: 1783 VEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLV- 1841
Query: 64 SASNQLARGLLHFLHTKAVPNENQDGDHIVAVSLAPSSG-------LIQVLLAVWKAGAA 116
++ N N + VA +G + VL +
Sbjct: 1842 ----EIV-------------NYNVENQQYVA------AGDLRALDTVTNVLNFIKLQKID 1878
Query: 117 YLPLDVTAPEQRVKHIL 133
+ L + + V+ L
Sbjct: 1879 IIELQKSLSLEEVEGHL 1895
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 42.5 bits (99), Expect = 2e-04
Identities = 38/257 (14%), Positives = 75/257 (29%), Gaps = 78/257 (30%)
Query: 1 MDPNYLSILKGRDTALEKIYKEKQ-LHRIFE----KNAALSPDN-----TALIFEEQDKD 50
+DPN+ S +I+ + L R+ + +N L N F K
Sbjct: 209 IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCK- 267
Query: 51 TLVITNETYSELNSASNQLARGLLHFLHTKAVP-NENQDGDHIVAVSLAPSSGLIQVLLA 109
L+ T ++ L+ T + + + L P LL
Sbjct: 268 ILLTTRFK-----QVTDFLS-----AATTTHISLDHHSMT-------LTPDEVK--SLLL 308
Query: 110 VWKAGAAYLPLDVTA---PEQRVKHILNEARPLLV--IAEN--EQAC--ENLAYKGRTVL 160
+ LD P + + P + IAE+ + +N + L
Sbjct: 309 KY--------LDCRPQDLPREVLTTN-----PRRLSIIAESIRDGLATWDNWKHVNCDKL 355
Query: 161 SLPQLRLLSASLSHNNIPGESMLHSDNNNEQSNDIAIVLYTSGSTGIPKGVRLPHEVILN 220
+ ++ +SL+ L + + +++ P +P + L+
Sbjct: 356 T----TIIESSLNV--------LEPAEYRKMFDRLSV---------FPPSAHIPTIL-LS 393
Query: 221 RLAWQWATFPYSPSERV 237
+ W S V
Sbjct: 394 LI---WFDVIKSDVMVV 407
Score = 29.8 bits (66), Expect = 1.5
Identities = 37/187 (19%), Positives = 55/187 (29%), Gaps = 44/187 (23%)
Query: 2 DPNYLSILKGRDTALEKIYKEKQLHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSE 61
+ +SI K+ E LHR + N F+ D + YS
Sbjct: 422 KESTISIPSIYLELKVKLENEYALHRSI-----VDHYNIPKTFDSDDLIPPYLDQYFYSH 476
Query: 62 L--------NSASNQLARGL---LHFLHTKAVPNENQDGDHIVAVSLA-PSSGLIQVLLA 109
+ + L R + FL K I S A +SG I L
Sbjct: 477 IGHHLKNIEHPERMTLFRMVFLDFRFLEQK-----------IRHDSTAWNASGSILNTLQ 525
Query: 110 VWKAGAAYLPLDVTAPEQRVKHILNEARPLLVIAENEQACENLAYKGRTVLSLPQLRLLS 169
K Y+ + E+ V IL+ L I EN ++ LL
Sbjct: 526 QLKFYKPYICDNDPKYERLVNAILDF---LPKIEEN-------------LICSKYTDLLR 569
Query: 170 ASLSHNN 176
+L +
Sbjct: 570 IALMAED 576
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP
forming, related to firefly luciferase, ligase; HET:
AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Length = 663
Score = 38.3 bits (90), Expect = 0.002
Identities = 12/14 (85%), Positives = 13/14 (92%)
Query: 198 VLYTSGSTGIPKGV 211
+LYTSGSTG PKGV
Sbjct: 267 LLYTSGSTGAPKGV 280
Score = 27.9 bits (63), Expect = 4.6
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Query: 37 PDNTALIFEEQD-KDTLVITNETYSELNSASNQLARGL 73
P+ A+IFE + I TY EL Q+A+ L
Sbjct: 96 PNKKAIIFEGDEPGQGYSI---TYKELLEEVCQVAQVL 130
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming,
thioester-forming, ligase; HET: COA PRX; 1.75A
{Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A*
2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Length = 652
Score = 37.9 bits (89), Expect = 0.003
Identities = 12/14 (85%), Positives = 13/14 (92%)
Query: 198 VLYTSGSTGIPKGV 211
+LYTSGSTG PKGV
Sbjct: 261 ILYTSGSTGKPKGV 274
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics,
riken structural genomics/proteomics initiative, RSGI;
HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1
PDB: 1ult_A* 1v26_A*
Length = 541
Score = 34.0 bits (79), Expect = 0.055
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 193 NDIAIVLYTSGSTGIPKGV 211
+ YT+G+TG+PKGV
Sbjct: 176 RAACGMAYTTGTTGLPKGV 194
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 30.1 bits (67), Expect = 0.71
Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 20/83 (24%)
Query: 17 EKIYK--EKQLHRIFEKNAALSPDNTALIFEEQDKDTLVITN--ETYSEL---NSASNQL 69
E I K E+Q R+ E +AA E+ KD + + SE N +N++
Sbjct: 85 ESIRKWREEQRKRLQELDAASKVMEQEWR-EKAKKD---LEEWNQRQSEQVEKNKINNRI 140
Query: 70 ARGLLHFLHTKAVPNENQDGDHI 92
A F + D D I
Sbjct: 141 AD--KAFY-------QQPDADII 154
>4ae5_A Signal transduction protein trap; signaling protein,
phosphorylation, RNAIII, quorum SENS biofilm, toxin
production; 1.85A {Staphylococcus aureus}
Length = 167
Score = 27.6 bits (61), Expect = 3.4
Identities = 15/88 (17%), Positives = 32/88 (36%), Gaps = 9/88 (10%)
Query: 16 LEKIYK----EKQLHRIFEKNAA-----LSPDNTALIFEEQDKDTLVITNETYSELNSAS 66
++K+Y LH+I N S +T++IFEE D +T++ + Y +
Sbjct: 1 MKKLYTSYGTYGFLHQIKINNPTHQLFQFSASDTSVIFEETDGETVLKSPSIYEVIKEIG 60
Query: 67 NQLARGLLHFLHTKAVPNENQDGDHIVA 94
+ + + + +
Sbjct: 61 EFSEHHFYCAIFIPSTEDHAYQLEKKLI 88
>2a0j_A PTS system, nitrogen regulatory IIA protein; nitrogen regulation,
structural genomics, OPPF, oxford prote production
facility; 2.50A {Neisseria meningitidis}
Length = 149
Score = 26.5 bits (59), Expect = 7.6
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 203 GSTGIPKGVRLPH 215
GSTG+ +GV +PH
Sbjct: 55 GSTGLGQGVAIPH 67
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.133 0.383
Gapped
Lambda K H
0.267 0.0789 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,575,305
Number of extensions: 269945
Number of successful extensions: 826
Number of sequences better than 10.0: 1
Number of HSP's gapped: 726
Number of HSP's successfully gapped: 48
Length of query: 311
Length of database: 6,701,793
Length adjustment: 93
Effective length of query: 218
Effective length of database: 4,105,140
Effective search space: 894920520
Effective search space used: 894920520
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (25.6 bits)