Query psy8315
Match_columns 107
No_of_seqs 2 out of 4
Neff 1.3
Searched_HMMs 13730
Date Sat Aug 17 00:36:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8315.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/8315hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2jdid1 a.69.1.1 (D:358-475) F 10.3 40 0.0029 21.9 0.9 13 3-15 48-60 (118)
2 d1pzra_ a.38.2.1 (A:) Erythron 10.0 32 0.0024 20.6 0.3 9 7-15 32-40 (60)
3 d1skye1 a.69.1.1 (E:357-470) F 9.3 47 0.0034 21.5 0.9 12 3-14 45-56 (114)
4 d1fx0b1 a.69.1.1 (B:378-485) F 9.2 47 0.0034 21.2 0.8 13 3-15 45-57 (108)
5 d1gtta2 d.177.1.1 (A:214-429) 8.0 53 0.0039 21.3 0.8 15 1-15 155-169 (216)
6 d1k8kd2 d.198.2.1 (D:121-284) 7.5 55 0.004 22.3 0.7 12 2-13 121-132 (164)
7 d1gtta1 d.177.1.1 (A:1-213) 4- 7.4 59 0.0043 21.5 0.8 15 1-15 149-163 (213)
8 d1nr9a_ d.177.1.1 (A:) Putativ 6.4 71 0.0052 21.1 0.8 15 1-15 166-180 (221)
9 d1sawa_ d.177.1.1 (A:) FAHD1 ( 6.4 71 0.0052 21.0 0.8 15 1-15 158-172 (217)
10 d1gxea_ b.1.1.4 (A:) Cardiac m 4.2 2.8E+02 0.021 14.0 2.3 16 78-93 12-27 (130)
No 1
>d2jdid1 a.69.1.1 (D:358-475) F1 ATP synthase beta subunit, domain 3 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=10.31 E-value=40 Score=21.95 Aligned_cols=13 Identities=38% Similarity=0.452 Sum_probs=10.2
Q ss_pred hhhhhhhhhhhcc
Q psy8315 3 WRILKLRNYLSQI 15 (107)
Q Consensus 3 wrilklrnyls~~ 15 (107)
-|-.||.+||||-
T Consensus 48 ~RARklqrfLsQp 60 (118)
T d2jdid1 48 SRARKIQRFLSQP 60 (118)
T ss_dssp HHHHHHHHHHCCC
T ss_pred HHHHHHHHHhcCc
Confidence 3667899999983
No 2
>d1pzra_ a.38.2.1 (A:) Erythronolide synthase {Saccharopolyspora erythraea [TaxId: 1836]}
Probab=9.98 E-value=32 Score=20.57 Aligned_cols=9 Identities=56% Similarity=0.925 Sum_probs=7.6
Q ss_pred hhhhhhhcc
Q psy8315 7 KLRNYLSQI 15 (107)
Q Consensus 7 klrnyls~~ 15 (107)
|||.||.|+
T Consensus 32 kLRRYLkRT 40 (60)
T d1pzra_ 32 KLRRYLKRT 40 (60)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 789999875
No 3
>d1skye1 a.69.1.1 (E:357-470) F1 ATP synthase beta subunit, domain 3 {Bacillus sp., strain ps3 [TaxId: 1409]}
Probab=9.28 E-value=47 Score=21.51 Aligned_cols=12 Identities=33% Similarity=0.523 Sum_probs=9.8
Q ss_pred hhhhhhhhhhhc
Q psy8315 3 WRILKLRNYLSQ 14 (107)
Q Consensus 3 wrilklrnyls~ 14 (107)
-|-.||.+||||
T Consensus 45 ~RARklqrFLsQ 56 (114)
T d1skye1 45 HRARRIQFFLSQ 56 (114)
T ss_dssp HHHHHHHHHTCB
T ss_pred HHHHHHHHHhcC
Confidence 466789999998
No 4
>d1fx0b1 a.69.1.1 (B:378-485) F1 ATP synthase beta subunit, domain 3 {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=9.19 E-value=47 Score=21.23 Aligned_cols=13 Identities=38% Similarity=0.416 Sum_probs=9.9
Q ss_pred hhhhhhhhhhhcc
Q psy8315 3 WRILKLRNYLSQI 15 (107)
Q Consensus 3 wrilklrnyls~~ 15 (107)
-|-.||.+||+|-
T Consensus 45 ~RArklq~FLtQp 57 (108)
T d1fx0b1 45 ARARKIERFLSQP 57 (108)
T ss_dssp HHHHHHHHHTCCC
T ss_pred HHHHHHHHHhccc
Confidence 3667889999983
No 5
>d1gtta2 d.177.1.1 (A:214-429) 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpcE {Escherichia coli [TaxId: 562]}
Probab=8.03 E-value=53 Score=21.32 Aligned_cols=15 Identities=33% Similarity=0.572 Sum_probs=13.2
Q ss_pred Cchhhhhhhhhhhcc
Q psy8315 1 MIWRILKLRNYLSQI 15 (107)
Q Consensus 1 miwrilklrnyls~~ 15 (107)
|||.+-.|-.|||+.
T Consensus 155 Mi~~~~~li~~lS~~ 169 (216)
T d1gtta2 155 LIFSVPFLIAYLSEF 169 (216)
T ss_dssp BSSCHHHHHHHHHTT
T ss_pred hccCHHHHHHHHhCC
Confidence 899999999999874
No 6
>d1k8kd2 d.198.2.1 (D:121-284) ARPC2 (34 kDa subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=7.53 E-value=55 Score=22.30 Aligned_cols=12 Identities=42% Similarity=0.581 Sum_probs=10.9
Q ss_pred chhhhhhhhhhh
Q psy8315 2 IWRILKLRNYLS 13 (107)
Q Consensus 2 iwrilklrnyls 13 (107)
||.|.-.||||.
T Consensus 121 i~~i~~FR~Ylh 132 (164)
T d1k8kd2 121 INLIHTFRDYLH 132 (164)
T ss_dssp HHHHTTHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 799999999985
No 7
>d1gtta1 d.177.1.1 (A:1-213) 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpcE {Escherichia coli [TaxId: 562]}
Probab=7.44 E-value=59 Score=21.46 Aligned_cols=15 Identities=20% Similarity=0.191 Sum_probs=13.5
Q ss_pred Cchhhhhhhhhhhcc
Q psy8315 1 MIWRILKLRNYLSQI 15 (107)
Q Consensus 1 miwrilklrnyls~~ 15 (107)
|||.+-.|-.|||+.
T Consensus 149 mi~~~~~lI~~lS~~ 163 (213)
T d1gtta1 149 LQRNAAQLLSALSEF 163 (213)
T ss_dssp BSSCHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHhCC
Confidence 899999999999984
No 8
>d1nr9a_ d.177.1.1 (A:) Putative isomerase YcgM {Escherichia coli [TaxId: 562]}
Probab=6.44 E-value=71 Score=21.07 Aligned_cols=15 Identities=40% Similarity=0.711 Sum_probs=13.2
Q ss_pred Cchhhhhhhhhhhcc
Q psy8315 1 MIWRILKLRNYLSQI 15 (107)
Q Consensus 1 miwrilklrnyls~~ 15 (107)
|||.+-.|-.|||+.
T Consensus 166 Mi~~~~elI~~lS~~ 180 (221)
T d1nr9a_ 166 MIHKIVPLIAYMSKF 180 (221)
T ss_dssp BSSCHHHHHHHHTTT
T ss_pred ccCCHHHHHHHHhCC
Confidence 899999999999973
No 9
>d1sawa_ d.177.1.1 (A:) FAHD1 (Flj36880, YISKL) {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.43 E-value=71 Score=20.96 Aligned_cols=15 Identities=40% Similarity=0.665 Sum_probs=13.2
Q ss_pred Cchhhhhhhhhhhcc
Q psy8315 1 MIWRILKLRNYLSQI 15 (107)
Q Consensus 1 miwrilklrnyls~~ 15 (107)
|||.+-.|-.|||+.
T Consensus 158 mi~~~~eli~~lS~~ 172 (217)
T d1sawa_ 158 MIFSIPYIISYVSKI 172 (217)
T ss_dssp BSSCHHHHHHHHHTT
T ss_pred hcccHHHHHHHHhCC
Confidence 899999999999974
No 10
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.15 E-value=2.8e+02 Score=14.03 Aligned_cols=16 Identities=31% Similarity=0.603 Sum_probs=7.9
Q ss_pred CCcCCCcccccccccc
Q psy8315 78 PRETPDKISVKSNSEV 93 (107)
Q Consensus 78 P~qT~~~I~~ksnsev 93 (107)
+.+.++.|.+...+.|
T Consensus 12 ~~~~~~~v~v~~G~~v 27 (130)
T d1gxea_ 12 PGRIPDTIVVVAGNKL 27 (130)
T ss_dssp SCCCCCEEEESSSSCC
T ss_pred CCCCCCCEEEEcCCeE
Confidence 3444555555554444
Done!