Query psy8320
Match_columns 119
No_of_seqs 90 out of 106
Neff 3.4
Searched_HMMs 13730
Date Sat Aug 17 00:42:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8320.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/8320hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jm7b_ g.44.1.1 (B:) bard1 RI 78.5 0.54 3.9E-05 29.4 2.2 35 75-109 24-66 (97)
2 d1j2oa1 g.39.1.3 (A:1-30) Rhom 73.8 0.57 4.1E-05 25.6 1.1 11 100-110 5-15 (30)
3 d1rutx1 g.39.1.3 (X:19-48) LIM 71.5 0.64 4.7E-05 25.3 0.9 11 100-110 4-14 (30)
4 d1jm7a_ g.44.1.1 (A:) brca1 RI 67.2 0.84 6.1E-05 28.7 1.0 35 75-109 23-69 (103)
5 d1bora_ g.44.1.1 (A:) Acute pr 65.1 2.3 0.00017 24.6 2.6 37 75-111 8-50 (56)
6 d1ibia2 g.39.1.3 (A:145-175) C 63.4 1.1 7.9E-05 24.5 0.8 13 100-112 2-14 (31)
7 d1k3xa3 g.39.1.8 (A:223-262) E 62.1 1 7.3E-05 25.3 0.5 30 65-94 4-38 (40)
8 d2c6aa1 g.41.11.1 (A:290-335) 57.6 1.6 0.00012 25.7 1.0 21 74-95 14-34 (46)
9 d1chca_ g.44.1.1 (A:) Immediat 56.8 2.1 0.00016 25.1 1.4 40 73-112 5-54 (68)
10 d2c2la2 g.44.1.2 (A:225-304) S 54.9 1.6 0.00012 26.2 0.7 36 75-110 9-54 (80)
11 d2jnea1 g.41.18.1 (A:1-71) Hyp 53.9 1.3 9.8E-05 28.2 0.1 38 74-111 3-44 (71)
12 d1tdza3 g.39.1.8 (A:225-271) D 50.0 2.3 0.00017 24.2 0.8 32 63-94 8-44 (47)
13 d1tjla2 g.39.1.13 (A:111-151) 49.3 2.7 0.0002 23.4 0.9 11 99-109 2-12 (41)
14 d2dloa1 g.39.1.3 (A:8-42) Thyr 47.9 3.1 0.00022 23.2 1.0 12 99-110 9-20 (35)
15 d1ubdc2 g.37.1.1 (C:323-350) Y 47.8 1.6 0.00011 23.4 -0.3 17 99-115 3-19 (28)
16 d1ee8a3 g.39.1.8 (A:211-266) D 46.8 3.7 0.00027 24.1 1.3 33 63-95 15-52 (56)
17 d1fbva4 g.44.1.1 (A:356-434) C 42.6 3.3 0.00024 25.1 0.6 40 73-112 23-72 (79)
18 d2cr8a1 g.41.11.1 (A:8-48) MDM 41.8 3.7 0.00027 23.6 0.7 20 75-95 6-25 (41)
19 d1k82a3 g.39.1.8 (A:225-268) D 40.9 4.3 0.00031 22.8 0.9 32 63-94 6-42 (44)
20 d2baya1 g.44.1.2 (A:1-56) Pre- 38.2 2.1 0.00015 24.3 -0.8 24 86-109 19-46 (56)
21 d1r2za3 g.39.1.8 (A:229-274) D 37.9 4.7 0.00034 22.7 0.8 32 63-94 8-44 (46)
22 d1rutx3 g.39.1.3 (X:83-113) LI 33.7 5.3 0.00039 21.6 0.5 14 98-111 2-15 (31)
23 d2epra1 g.37.1.1 (A:350-384) P 31.8 4.4 0.00032 22.5 -0.1 13 99-111 6-18 (35)
24 d1wt8a1 g.3.7.2 (A:1-31) Bmkx 30.6 13 0.00097 19.8 1.8 19 75-94 12-30 (31)
25 d1x3ha1 g.39.1.3 (A:8-42) Leup 30.2 8.7 0.00063 20.6 1.0 11 100-110 10-20 (35)
26 d1e7la2 d.4.1.5 (A:1-103) Reco 25.9 11 0.00083 24.6 1.2 12 97-108 19-30 (103)
27 d4cpai_ g.3.2.1 (I:) Carboxype 24.9 11 0.00082 20.9 0.8 24 78-101 10-33 (37)
28 d1wgma_ g.44.1.2 (A:) Ubiquiti 23.2 8.3 0.00061 24.1 0.0 35 75-109 24-68 (98)
29 d1g47a2 g.39.1.3 (A:36-70) Pin 22.4 16 0.0012 19.6 1.2 15 100-114 2-16 (35)
30 d1iyma_ g.44.1.1 (A:) EL5 RING 22.3 13 0.00097 20.8 0.9 23 87-109 28-54 (55)
31 d1kbea_ g.49.1.1 (A:) Kinase s 21.7 6.1 0.00045 22.4 -0.8 21 75-97 16-36 (49)
32 d1g25a_ g.44.1.1 (A:) TFIIH Ma 21.5 12 0.0009 21.4 0.6 37 74-110 4-55 (65)
33 d2dara2 g.39.1.3 (A:8-52) PDZ 20.5 17 0.0013 20.9 1.1 12 99-110 19-30 (45)
No 1
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.50 E-value=0.54 Score=29.40 Aligned_cols=35 Identities=17% Similarity=0.519 Sum_probs=25.5
Q ss_pred cchhhhhhcc------cCCCccCcccc--cccccccccCcccc
Q psy8320 75 SCKICRQKVH------QVGSHYCQACA--YKKGICAMCGKKLL 109 (119)
Q Consensus 75 ~C~iCK~~vh------q~g~~YCq~CA--YkkGiCamCGKki~ 109 (119)
.|.||..-+. .=||.||..|. +-...|..|...+.
T Consensus 24 ~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~~CP~Cr~~~~ 66 (97)
T d1jm7b_ 24 RCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAW 66 (97)
T ss_dssp SCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTTBCSSSCCBCS
T ss_pred CCccCCchhhcCceeCCCCCchhHHHHHHHHhccccccCCcCc
Confidence 6888876432 23899999994 45567999998764
No 2
>d1j2oa1 g.39.1.3 (A:1-30) Rhombotin-2 (Lmo2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=73.80 E-value=0.57 Score=25.62 Aligned_cols=11 Identities=27% Similarity=0.721 Sum_probs=10.2
Q ss_pred cccccCccccc
Q psy8320 100 ICAMCGKKLLD 110 (119)
Q Consensus 100 iCamCGKki~D 110 (119)
.||.||++|+|
T Consensus 5 ~CaGC~~~I~D 15 (30)
T d1j2oa1 5 TCGGCQQNIGD 15 (30)
T ss_dssp CBSSSCSCBCS
T ss_pred ccCCCCCcchH
Confidence 59999999998
No 3
>d1rutx1 g.39.1.3 (X:19-48) LIM only 4 (Lmo4) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=71.46 E-value=0.64 Score=25.33 Aligned_cols=11 Identities=55% Similarity=1.044 Sum_probs=10.2
Q ss_pred cccccCccccc
Q psy8320 100 ICAMCGKKLLD 110 (119)
Q Consensus 100 iCamCGKki~D 110 (119)
.||.||.+|.|
T Consensus 4 ~CaGC~~~I~D 14 (30)
T d1rutx1 4 RCAGCGGKIAD 14 (30)
T ss_dssp BBTTTCCBCCC
T ss_pred ccCCCCCccch
Confidence 69999999998
No 4
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.16 E-value=0.84 Score=28.74 Aligned_cols=35 Identities=26% Similarity=0.823 Sum_probs=25.3
Q ss_pred cchhhhhhccc-----CCCccCcccccc-----c--ccccccCcccc
Q psy8320 75 SCKICRQKVHQ-----VGSHYCQACAYK-----K--GICAMCGKKLL 109 (119)
Q Consensus 75 ~C~iCK~~vhq-----~g~~YCq~CAYk-----k--GiCamCGKki~ 109 (119)
.|.||...+.. =||.||..|-+. + ..|++|...+.
T Consensus 23 ~CpIC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 69 (103)
T d1jm7a_ 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDIT 69 (103)
T ss_dssp SCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCC
T ss_pred CCCccCchhCCeEEcCCCCchhhHHHHHHHHHCCCCCcCcCCCCcCC
Confidence 57777765543 289999999653 2 27999998874
No 5
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.10 E-value=2.3 Score=24.64 Aligned_cols=37 Identities=16% Similarity=0.398 Sum_probs=26.7
Q ss_pred cchhhhhhcccC-----CCccCccccccc-ccccccCcccccc
Q psy8320 75 SCKICRQKVHQV-----GSHYCQACAYKK-GICAMCGKKLLDV 111 (119)
Q Consensus 75 ~C~iCK~~vhq~-----g~~YCq~CAYkk-GiCamCGKki~Dt 111 (119)
.|.||.....++ ||.||..|.-+. ..|.+|...+.-.
T Consensus 8 ~C~IC~~~~~~p~~lpCgH~fC~~Ci~~~~~~CP~Cr~~~~~~ 50 (56)
T d1bora_ 8 RCQQCQAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPLG 50 (56)
T ss_dssp SCSSSCSSCBCCSCSTTSCCSBTTTCSSSSSSCSSCCSSSSCC
T ss_pred CCcccCcccCCCEEecCCCHHhHHHHHcCCCcCcCCCCcccCC
Confidence 677776654332 889999997544 4899999888643
No 6
>d1ibia2 g.39.1.3 (A:145-175) Cysteine-rich (intestinal) protein, CRP, CRIP {Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934]}
Probab=63.38 E-value=1.1 Score=24.53 Aligned_cols=13 Identities=46% Similarity=0.853 Sum_probs=10.6
Q ss_pred cccccCccccccc
Q psy8320 100 ICAMCGKKLLDVK 112 (119)
Q Consensus 100 iCamCGKki~Dt~ 112 (119)
.||+|||.+-.|.
T Consensus 2 rca~cgk~lestt 14 (31)
T d1ibia2 2 RCAKCGKSLESTT 14 (31)
T ss_dssp ECSSSCCEECSSC
T ss_pred ccccccCccccce
Confidence 4999999987664
No 7
>d1k3xa3 g.39.1.8 (A:223-262) Endonuclease VIII {Escherichia coli [TaxId: 562]}
Probab=62.14 E-value=1 Score=25.31 Aligned_cols=30 Identities=23% Similarity=0.656 Sum_probs=21.6
Q ss_pred ccCCCcccCccchhhhhhccc-----CCCccCccc
Q psy8320 65 RFNPYTQKFESCKICRQKVHQ-----VGSHYCQAC 94 (119)
Q Consensus 65 r~~Py~~~~~~C~iCK~~vhq-----~g~~YCq~C 94 (119)
+|.-|+.....|..|.+.|.. -...||+.|
T Consensus 4 ~~~VYgR~g~pC~~C~~~I~~~~~~gR~t~~Cp~C 38 (40)
T d1k3xa3 4 RFKVFHRDGEPCERCGSIIEKTTLSSRPFYWCPGC 38 (40)
T ss_dssp CCSSTTCTTSBCTTTCCBCEEEEETTEEEEECTTT
T ss_pred EEEEeCCCCCccCcCCCEEEEEEECCCCCEEChhh
Confidence 677888778899999987632 234677766
No 8
>d2c6aa1 g.41.11.1 (A:290-335) MDM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.59 E-value=1.6 Score=25.73 Aligned_cols=21 Identities=19% Similarity=0.517 Sum_probs=16.9
Q ss_pred ccchhhhhhcccCCCccCcccc
Q psy8320 74 ESCKICRQKVHQVGSHYCQACA 95 (119)
Q Consensus 74 ~~C~iCK~~vhq~g~~YCq~CA 95 (119)
=+|..|+ +...|..-||+.|=
T Consensus 14 WkC~~C~-~~N~Pl~ryC~rCW 34 (46)
T d2c6aa1 14 WKCTSCN-EMNPPLPSHCNRCW 34 (46)
T ss_dssp EECTTTC-CEECSSCSSCTTTC
T ss_pred ccCcccc-ccCCcchhHhHHHH
Confidence 4899997 66666889999993
No 9
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=56.80 E-value=2.1 Score=25.05 Aligned_cols=40 Identities=23% Similarity=0.572 Sum_probs=27.7
Q ss_pred Cccchhhhhhccc------CCCccCccccc----ccccccccCccccccc
Q psy8320 73 FESCKICRQKVHQ------VGSHYCQACAY----KKGICAMCGKKLLDVK 112 (119)
Q Consensus 73 ~~~C~iCK~~vhq------~g~~YCq~CAY----kkGiCamCGKki~Dt~ 112 (119)
...|.||-..+.+ =||.||..|.. .+..|.+|-..|.++.
T Consensus 5 ~d~C~IC~~~~~~~~~~~~C~H~Fc~~Ci~~w~~~~~~CP~CR~~i~~~~ 54 (68)
T d1chca_ 5 AERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVESVV 54 (68)
T ss_dssp CCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCCEE
T ss_pred CCCCccCCcCccCCcEEeCCCCcCcHHHHHHHHHhCCcCCCCCcchHhhc
Confidence 3467777554422 26788888874 6779999998886543
No 10
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=54.90 E-value=1.6 Score=26.16 Aligned_cols=36 Identities=14% Similarity=0.091 Sum_probs=24.4
Q ss_pred cchhhhhhccc-----CCCccCcccccc-----cccccccCccccc
Q psy8320 75 SCKICRQKVHQ-----VGSHYCQACAYK-----KGICAMCGKKLLD 110 (119)
Q Consensus 75 ~C~iCK~~vhq-----~g~~YCq~CAYk-----kGiCamCGKki~D 110 (119)
.|.||..-+.. -||.||+.|-.+ ...|..||.++..
T Consensus 9 ~CpIc~~l~~dPv~~~cGhtfc~~ci~~~l~~~~~~cP~c~~~l~~ 54 (80)
T d2c2la2 9 CGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQ 54 (80)
T ss_dssp BCTTTCSBCSSEEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCG
T ss_pred cCcCcCchhhhhcccCCcCeecHHHHHHHHhcCCccCCCccccccc
Confidence 56666653322 389999999532 3479999998753
No 11
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia coli [TaxId: 562]}
Probab=53.86 E-value=1.3 Score=28.15 Aligned_cols=38 Identities=26% Similarity=0.672 Sum_probs=30.2
Q ss_pred ccchhhhhhccc-CCCccCcccc--c-ccccccccCcccccc
Q psy8320 74 ESCKICRQKVHQ-VGSHYCQACA--Y-KKGICAMCGKKLLDV 111 (119)
Q Consensus 74 ~~C~iCK~~vhq-~g~~YCq~CA--Y-kkGiCamCGKki~Dt 111 (119)
..|..|.+.+.+ .|+.+|..|. | +.+.|.-|+..+--.
T Consensus 3 ~~CP~C~~eL~~~~~~~~C~~C~~~~~~~a~CPdC~~~Le~L 44 (71)
T d2jnea1 3 LHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQPLQVL 44 (71)
T ss_dssp CBCSSSCSBEEEETTEEEETTTCCEEEEEEECTTTCSBCEEE
T ss_pred CcCCCccCcccccCCCEehhhhhhhheeEEeCCccccHHHHH
Confidence 479999999976 5778899997 3 467999999987643
No 12
>d1tdza3 g.39.1.8 (A:225-271) DNA repair protein MutM (Fpg) {Lactococcus lactis [TaxId: 1358]}
Probab=50.04 E-value=2.3 Score=24.24 Aligned_cols=32 Identities=25% Similarity=0.744 Sum_probs=22.6
Q ss_pred hhccCCCcccCccchhhhhhc-----ccCCCccCccc
Q psy8320 63 KARFNPYTQKFESCKICRQKV-----HQVGSHYCQAC 94 (119)
Q Consensus 63 k~r~~Py~~~~~~C~iCK~~v-----hq~g~~YCq~C 94 (119)
.++|.-|+.....|..|...| .+-+..||..|
T Consensus 8 q~~l~VYgR~g~~C~~C~~~I~~~~~~gR~t~~Cp~C 44 (47)
T d1tdza3 8 QNELQVYGKTGEKCSRCGAEIQKIKVAGRGTHFCPVC 44 (47)
T ss_dssp GGGCSSTTCTTSBCTTTCCBCEEEEETTEEEEECTTT
T ss_pred cceEEEeCCCCCCcCCCCcEEEEEEECCcccEECccc
Confidence 356788887778899998755 33345777776
No 13
>d1tjla2 g.39.1.13 (A:111-151) DnaK suppressor protein DksA, zinc finger domain {Escherichia coli [TaxId: 562]}
Probab=49.30 E-value=2.7 Score=23.41 Aligned_cols=11 Identities=36% Similarity=0.969 Sum_probs=9.9
Q ss_pred ccccccCcccc
Q psy8320 99 GICAMCGKKLL 109 (119)
Q Consensus 99 GiCamCGKki~ 109 (119)
|+|-.||+.|-
T Consensus 2 G~C~~Cg~~I~ 12 (41)
T d1tjla2 2 GYCESCGVEIG 12 (41)
T ss_dssp SBCSSSSCBCC
T ss_pred cchhhCcCccC
Confidence 79999999985
No 14
>d2dloa1 g.39.1.3 (A:8-42) Thyroid receptor interacting protein 6, TRIP6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.91 E-value=3.1 Score=23.21 Aligned_cols=12 Identities=42% Similarity=0.963 Sum_probs=10.5
Q ss_pred ccccccCccccc
Q psy8320 99 GICAMCGKKLLD 110 (119)
Q Consensus 99 GiCamCGKki~D 110 (119)
-.|+.||..|+|
T Consensus 9 EkC~~C~~~I~d 20 (35)
T d2dloa1 9 EKCATCSQPILD 20 (35)
T ss_dssp CBCTTTCCBCCS
T ss_pred HHHHHhchHHHH
Confidence 479999999997
No 15
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.85 E-value=1.6 Score=23.39 Aligned_cols=17 Identities=35% Similarity=0.864 Sum_probs=12.6
Q ss_pred ccccccCcccccccccc
Q psy8320 99 GICAMCGKKLLDVKNYK 115 (119)
Q Consensus 99 GiCamCGKki~Dt~~yk 115 (119)
-+|+-|||....-+..+
T Consensus 3 hvc~ecgkaf~essklk 19 (28)
T d1ubdc2 3 HVCAECGKAFVESSKLK 19 (28)
T ss_dssp EECTTTCCEESSHHHHH
T ss_pred chHHHHhHHHHHHHHHH
Confidence 37999999887655443
No 16
>d1ee8a3 g.39.1.8 (A:211-266) DNA repair protein MutM (Fpg) {Thermus thermophilus [TaxId: 274]}
Probab=46.79 E-value=3.7 Score=24.06 Aligned_cols=33 Identities=27% Similarity=0.718 Sum_probs=23.0
Q ss_pred hhccCCCcccCccchhhhhhcc-----cCCCccCcccc
Q psy8320 63 KARFNPYTQKFESCKICRQKVH-----QVGSHYCQACA 95 (119)
Q Consensus 63 k~r~~Py~~~~~~C~iCK~~vh-----q~g~~YCq~CA 95 (119)
..+|.-|+.....|..|+..|. +-...||..|-
T Consensus 15 q~~~~VY~r~g~~C~~C~~~I~~~~~~~R~t~~Cp~CQ 52 (56)
T d1ee8a3 15 QTRHAVYGREGLPCPACGRPVERRVVAGRGTHFCPTCQ 52 (56)
T ss_dssp GGGCSSTTCTTSBCTTTCCBCEEEESSSCEEEECTTTT
T ss_pred cceEEEecCCCcccccCCceEEEEEECCCcCEECcCcc
Confidence 4677788877789999988663 23346777763
No 17
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.63 E-value=3.3 Score=25.06 Aligned_cols=40 Identities=25% Similarity=0.679 Sum_probs=29.8
Q ss_pred Cccchhhhhhccc-----CCCccCccccc-----ccccccccCccccccc
Q psy8320 73 FESCKICRQKVHQ-----VGSHYCQACAY-----KKGICAMCGKKLLDVK 112 (119)
Q Consensus 73 ~~~C~iCK~~vhq-----~g~~YCq~CAY-----kkGiCamCGKki~Dt~ 112 (119)
...|.||...... =||.||..|.. +...|.+|-+.|.++.
T Consensus 23 ~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~wl~~~~~~CP~Cr~~i~~~~ 72 (79)
T d1fbva4 23 FQLCKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTE 72 (79)
T ss_dssp TTBCTTTSSSBCCEECSSSCCEECHHHHHHHHHTTCCSCTTTCCCCCCCC
T ss_pred CCCCccCCCcCCCeEEeCCCCeeeHHHHHHHHHHCcCcCCCCCcCccCCc
Confidence 3479999875543 48999999973 3346999999997654
No 18
>d2cr8a1 g.41.11.1 (A:8-48) MDM4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.76 E-value=3.7 Score=23.60 Aligned_cols=20 Identities=30% Similarity=0.835 Sum_probs=15.5
Q ss_pred cchhhhhhcccCCCccCcccc
Q psy8320 75 SCKICRQKVHQVGSHYCQACA 95 (119)
Q Consensus 75 ~C~iCK~~vhq~g~~YCq~CA 95 (119)
+|..| .+...|..-||+.|-
T Consensus 6 kC~~C-~~~N~Pl~ryC~rCW 25 (41)
T d2cr8a1 6 QCTEC-KKFNSPSKRYCFRCW 25 (41)
T ss_dssp ECSSS-CCEECSSCCBCTTTC
T ss_pred ecCcc-cccCCcchhHHHHHH
Confidence 78888 556666889999983
No 19
>d1k82a3 g.39.1.8 (A:225-268) DNA repair protein MutM (Fpg) {Escherichia coli [TaxId: 562]}
Probab=40.86 E-value=4.3 Score=22.80 Aligned_cols=32 Identities=28% Similarity=0.770 Sum_probs=21.9
Q ss_pred hhccCCCcccCccchhhhhhcc-----cCCCccCccc
Q psy8320 63 KARFNPYTQKFESCKICRQKVH-----QVGSHYCQAC 94 (119)
Q Consensus 63 k~r~~Py~~~~~~C~iCK~~vh-----q~g~~YCq~C 94 (119)
.+.|.-|+-....|..|.+.|. +-+..||..|
T Consensus 6 q~~~~VYgR~g~~C~~C~~~I~~~~~~~R~t~~Cp~C 42 (44)
T d1k82a3 6 AQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRQC 42 (44)
T ss_dssp GGGCSSTTCTTSBCTTTCCBCEEEEETTEEEEECTTT
T ss_pred cceeEEeCCCCCCcCCCCCEEEEEEECCcccEEChhh
Confidence 3567788877778999988663 2244667665
No 20
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=38.24 E-value=2.1 Score=24.34 Aligned_cols=24 Identities=8% Similarity=0.044 Sum_probs=19.5
Q ss_pred CCCccCccccc----ccccccccCcccc
Q psy8320 86 VGSHYCQACAY----KKGICAMCGKKLL 109 (119)
Q Consensus 86 ~g~~YCq~CAY----kkGiCamCGKki~ 109 (119)
-|+.||..|.+ +.+.|.+||..+.
T Consensus 19 cGh~fc~~cI~~~l~~~~~CP~c~~~l~ 46 (56)
T d2baya1 19 SRTIFEKSLLEQYVKDTGNDPITNEPLS 46 (56)
T ss_dssp TTEEEEHHHHHHHHHHHSBCTTTCCBCC
T ss_pred CCCcccHHHHHHHHhhccCCCccCCcCC
Confidence 38889998854 5789999999875
No 21
>d1r2za3 g.39.1.8 (A:229-274) DNA repair protein MutM (Fpg) {Bacillus stearothermophilus [TaxId: 1422]}
Probab=37.89 E-value=4.7 Score=22.71 Aligned_cols=32 Identities=28% Similarity=0.757 Sum_probs=21.7
Q ss_pred hhccCCCcccCccchhhhhhcc-----cCCCccCccc
Q psy8320 63 KARFNPYTQKFESCKICRQKVH-----QVGSHYCQAC 94 (119)
Q Consensus 63 k~r~~Py~~~~~~C~iCK~~vh-----q~g~~YCq~C 94 (119)
.++|.-|+-....|..|.+.|. +-...||..|
T Consensus 8 q~~~~VYgR~g~~C~~C~~~I~~~~~~gR~t~~Cp~C 44 (46)
T d1r2za3 8 QHHLYVYGRQGNPCKRCGTPIEKTVVAGRGTHYCPRC 44 (46)
T ss_dssp GGGCSSTTCTTSBCTTTCCBCEEEEETTEEEEECTTT
T ss_pred cceeEEeCCCCCccCCCCCeEEEEEECCCcCEEChhh
Confidence 3567788876778999988663 2234667666
No 22
>d1rutx3 g.39.1.3 (X:83-113) LIM only 4 (Lmo4) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.69 E-value=5.3 Score=21.60 Aligned_cols=14 Identities=29% Similarity=0.873 Sum_probs=11.2
Q ss_pred cccccccCcccccc
Q psy8320 98 KGICAMCGKKLLDV 111 (119)
Q Consensus 98 kGiCamCGKki~Dt 111 (119)
.|.|+.||..|.-+
T Consensus 2 ~g~Ca~C~~~I~~~ 15 (31)
T d1rutx3 2 SGACSACGQSIPAS 15 (31)
T ss_dssp CEECTTTCCEECTT
T ss_pred CcccccccCcCChh
Confidence 47899999998743
No 23
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.85 E-value=4.4 Score=22.49 Aligned_cols=13 Identities=46% Similarity=0.948 Sum_probs=10.9
Q ss_pred ccccccCcccccc
Q psy8320 99 GICAMCGKKLLDV 111 (119)
Q Consensus 99 GiCamCGKki~Dt 111 (119)
-.|-||||...|+
T Consensus 6 ~~ce~cgk~frdv 18 (35)
T d2epra1 6 VACEICGKIFRDV 18 (35)
T ss_dssp EEETTTTEEESSH
T ss_pred hhHHHHHHHHHHH
Confidence 4799999998876
No 24
>d1wt8a1 g.3.7.2 (A:1-31) Bmkx {Chinese scorpion (Buthus martensi karsch) [TaxId: 34649]}
Probab=30.62 E-value=13 Score=19.76 Aligned_cols=19 Identities=32% Similarity=0.938 Sum_probs=10.0
Q ss_pred cchhhhhhcccCCCccCccc
Q psy8320 75 SCKICRQKVHQVGSHYCQAC 94 (119)
Q Consensus 75 ~C~iCK~~vhq~g~~YCq~C 94 (119)
-|..|---+.- ..-|||+|
T Consensus 12 dcvmcglgisc-kngycqgc 30 (31)
T d1wt8a1 12 DCVMCGLGISC-KNGYCQGC 30 (31)
T ss_dssp GGGGGSSCCCC-CSEECTTC
T ss_pred ceEEeccceee-cCcccccC
Confidence 45555555544 34566665
No 25
>d1x3ha1 g.39.1.3 (A:8-42) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.17 E-value=8.7 Score=20.65 Aligned_cols=11 Identities=27% Similarity=0.875 Sum_probs=8.1
Q ss_pred cccccCccccc
Q psy8320 100 ICAMCGKKLLD 110 (119)
Q Consensus 100 iCamCGKki~D 110 (119)
+|+-|++.|++
T Consensus 10 kC~~C~~~I~g 20 (35)
T d1x3ha1 10 KCGGCNRPVLE 20 (35)
T ss_dssp BCTTTCCBCCS
T ss_pred hhhhcCCcccc
Confidence 67778887764
No 26
>d1e7la2 d.4.1.5 (A:1-103) Recombination endonuclease VII, N-terminal domain {Bacteriophage T4 [TaxId: 10665]}
Probab=25.91 E-value=11 Score=24.57 Aligned_cols=12 Identities=33% Similarity=1.054 Sum_probs=7.6
Q ss_pred ccccccccCccc
Q psy8320 97 KKGICAMCGKKL 108 (119)
Q Consensus 97 kkGiCamCGKki 108 (119)
+.|.|++||..+
T Consensus 19 Q~g~C~IC~~~~ 30 (103)
T d1e7la2 19 QNGKCLICQREL 30 (103)
T ss_dssp TTTBCTTTCCBC
T ss_pred hCCcCCCCCCCc
Confidence 445677777664
No 27
>d4cpai_ g.3.2.1 (I:) Carboxypeptidase A inhibitor {Potato [TaxId: 4113]}
Probab=24.87 E-value=11 Score=20.89 Aligned_cols=24 Identities=29% Similarity=0.709 Sum_probs=18.5
Q ss_pred hhhhhcccCCCccCcccccccccc
Q psy8320 78 ICRQKVHQVGSHYCQACAYKKGIC 101 (119)
Q Consensus 78 iCK~~vhq~g~~YCq~CAYkkGiC 101 (119)
-|++.-.-.|+.+||.|--..|-|
T Consensus 10 pc~t~ddcsg~~fcqacw~~a~tc 33 (37)
T d4cpai_ 10 PCKTHDDCSGAWFCQACWNSARTC 33 (37)
T ss_dssp BCSSSSSSCCCSSCCEEETTTTEE
T ss_pred CcccccCccchHHHHHHHHhcccc
Confidence 466666666999999998777765
No 28
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.17 E-value=8.3 Score=24.05 Aligned_cols=35 Identities=6% Similarity=-0.097 Sum_probs=26.0
Q ss_pred cchhhhhhccc-----CCC-ccCcccccc----cccccccCcccc
Q psy8320 75 SCKICRQKVHQ-----VGS-HYCQACAYK----KGICAMCGKKLL 109 (119)
Q Consensus 75 ~C~iCK~~vhq-----~g~-~YCq~CAYk----kGiCamCGKki~ 109 (119)
.|.||..-+.. .|+ .||..|-.+ ++.|..|+..+.
T Consensus 24 ~CPI~~~lm~dPV~~~~~~~ty~r~~I~~~l~~~~~~P~~~~~l~ 68 (98)
T d1wgma_ 24 LDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLT 68 (98)
T ss_dssp BCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCC
T ss_pred CCcCchhHHHHHHhcccccchhhHHHHHHHHHhcCCccccccccc
Confidence 88888874322 255 599988755 689999999875
No 29
>d1g47a2 g.39.1.3 (A:36-70) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.39 E-value=16 Score=19.58 Aligned_cols=15 Identities=27% Similarity=0.600 Sum_probs=12.0
Q ss_pred cccccCccccccccc
Q psy8320 100 ICAMCGKKLLDVKNY 114 (119)
Q Consensus 100 iCamCGKki~Dt~~y 114 (119)
.|+.|++.+.+...|
T Consensus 2 ~C~~C~~~f~~~~F~ 16 (35)
T d1g47a2 2 VCAQCFQQFPEGLFY 16 (35)
T ss_dssp CCTTTCCCCGGGCSE
T ss_pred CCCCCcCCCCCCCeE
Confidence 588999998877665
No 30
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=22.29 E-value=13 Score=20.82 Aligned_cols=23 Identities=17% Similarity=0.647 Sum_probs=17.0
Q ss_pred CCccCccccc----ccccccccCcccc
Q psy8320 87 GSHYCQACAY----KKGICAMCGKKLL 109 (119)
Q Consensus 87 g~~YCq~CAY----kkGiCamCGKki~ 109 (119)
||.||+.|.. .+..|+||-..|+
T Consensus 28 ~H~Fh~~Ci~~Wl~~~~~CP~CR~~i~ 54 (55)
T d1iyma_ 28 GHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCcccHHHHHHHHHhCCcCCCCCCEeE
Confidence 6778888864 3678999877664
No 31
>d1kbea_ g.49.1.1 (A:) Kinase suppressor of Ras, Ksr {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.65 E-value=6.1 Score=22.42 Aligned_cols=21 Identities=29% Similarity=0.866 Sum_probs=15.5
Q ss_pred cchhhhhhcccCCCccCcccccc
Q psy8320 75 SCKICRQKVHQVGSHYCQACAYK 97 (119)
Q Consensus 75 ~C~iCK~~vhq~g~~YCq~CAYk 97 (119)
.|..|...+.| | -.|+.|.|.
T Consensus 16 tC~~C~~~l~q-g-~~C~~C~~~ 36 (49)
T d1kbea_ 16 VCNVCQKSMIF-G-VKCKHCRLK 36 (49)
T ss_dssp CCSSSCCSSCC-E-EEETTTTEE
T ss_pred CchhhchhhhC-c-CCcCCCCCh
Confidence 48888888876 4 667777664
No 32
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.51 E-value=12 Score=21.39 Aligned_cols=37 Identities=27% Similarity=0.749 Sum_probs=24.7
Q ss_pred ccchhhhhhc----------ccCCCccCcccccc-----cccccccCccccc
Q psy8320 74 ESCKICRQKV----------HQVGSHYCQACAYK-----KGICAMCGKKLLD 110 (119)
Q Consensus 74 ~~C~iCK~~v----------hq~g~~YCq~CAYk-----kGiCamCGKki~D 110 (119)
..|.||...+ ..=||.||..|..+ ...|++|.+.|..
T Consensus 4 ~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~~CP~CR~~i~~ 55 (65)
T d1g25a_ 4 QGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRK 55 (65)
T ss_dssp TCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSS
T ss_pred CCCCcCCceeecCCceEEEeCccChHhhHHHHHHHhCcCcCCCCCCCcCccc
Confidence 3677776432 12478889999742 3479999988753
No 33
>d2dara2 g.39.1.3 (A:8-52) PDZ and LIM domain protein 5, Enigma {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.49 E-value=17 Score=20.90 Aligned_cols=12 Identities=25% Similarity=0.719 Sum_probs=8.5
Q ss_pred ccccccCccccc
Q psy8320 99 GICAMCGKKLLD 110 (119)
Q Consensus 99 GiCamCGKki~D 110 (119)
-+|+.|++.|.+
T Consensus 19 P~C~~C~~pI~g 30 (45)
T d2dara2 19 PMCAHCNQVIRG 30 (45)
T ss_dssp CBBSSSCCBCCS
T ss_pred eeccccCCcccC
Confidence 368888887763
Done!