Query psy8322
Match_columns 651
No_of_seqs 486 out of 3373
Neff 7.8
Searched_HMMs 46136
Date Sat Aug 17 00:44:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8322.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8322hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd03869 M14_CPX_like Peptidase 100.0 1E-86 2.2E-91 706.1 38.4 380 24-583 2-405 (405)
2 cd03863 M14_CPD_II The second 100.0 3.8E-85 8.2E-90 694.8 38.5 371 23-585 2-375 (375)
3 cd03864 M14_CPN Peptidase M14 100.0 1.4E-83 3E-88 685.6 39.9 379 28-584 1-392 (392)
4 cd03865 M14_CPE_H Peptidase M1 100.0 4.8E-83 1E-87 678.5 39.4 381 24-584 2-402 (402)
5 cd06245 M14_CPD_III The third 100.0 6.2E-83 1.3E-87 676.9 39.3 360 27-584 1-362 (363)
6 cd03866 M14_CPM Peptidase M14 100.0 6E-78 1.3E-82 642.3 39.2 359 24-574 2-363 (376)
7 cd03867 M14_CPZ Peptidase M14- 100.0 1.3E-77 2.8E-82 645.3 40.4 374 28-583 1-395 (395)
8 KOG2649|consensus 100.0 6.8E-78 1.5E-82 627.0 35.2 383 23-587 65-457 (500)
9 cd03868 M14_CPD_I The first ca 100.0 3.3E-76 7.1E-81 632.8 39.2 367 28-583 1-372 (372)
10 cd03858 M14_CP_N-E_like Carbox 100.0 2E-72 4.4E-77 605.8 39.9 372 28-583 1-374 (374)
11 KOG2650|consensus 100.0 1.6E-61 3.5E-66 511.9 23.8 269 18-292 111-395 (418)
12 cd03872 M14_CPA6 Carboxypeptid 100.0 6.6E-58 1.4E-62 472.5 25.5 257 27-292 1-273 (300)
13 cd06247 M14_CPO Peptidase M14 100.0 2.1E-57 4.6E-62 468.9 25.8 259 25-292 1-275 (298)
14 cd03870 M14_CPA Peptidase M14 100.0 5.2E-57 1.1E-61 467.7 25.8 260 23-292 1-275 (301)
15 cd03871 M14_CPB Peptidase M14 100.0 9.6E-57 2.1E-61 465.0 25.7 260 23-292 1-276 (300)
16 cd06246 M14_CPB2 Peptidase M14 100.0 1.2E-56 2.7E-61 465.2 26.2 259 25-292 2-276 (300)
17 cd03859 M14_CPT Peptidase M14- 100.0 1E-54 2.2E-59 452.8 26.0 193 26-219 2-210 (295)
18 cd06248 M14_CPA_CPB_like Pepti 100.0 8.8E-55 1.9E-59 453.6 24.9 262 25-292 1-281 (304)
19 cd06226 M14_CPT_like Peptidase 100.0 7.6E-51 1.6E-55 419.2 25.9 176 45-221 1-213 (293)
20 cd06227 Peptidase_M14-like_2 A 100.0 1.4E-49 3E-54 406.1 24.9 248 28-282 2-259 (272)
21 cd03860 M14_CP_A-B_like The Pe 100.0 6E-49 1.3E-53 409.8 25.1 253 28-292 1-271 (294)
22 cd06905 Peptidase_M14-like_8 A 100.0 3.5E-48 7.6E-53 408.8 25.5 252 25-282 1-339 (360)
23 smart00631 Zn_pept Zn_pept. 100.0 3.3E-47 7.3E-52 393.8 25.6 248 28-282 1-261 (277)
24 cd06228 Peptidase_M14-like_3 A 100.0 1.3E-47 2.9E-52 397.4 20.6 235 54-292 6-315 (332)
25 PF00246 Peptidase_M14: Zinc c 100.0 1.4E-46 3.1E-51 390.7 20.7 185 34-220 1-190 (279)
26 cd06229 M14_Endopeptidase_I Pe 100.0 4.5E-40 9.8E-45 336.0 20.3 205 57-282 1-235 (255)
27 KOG2650|consensus 100.0 5E-39 1.1E-43 340.8 14.3 233 258-505 121-417 (418)
28 cd06237 M14_Nna1_like_3 A bact 100.0 7.1E-37 1.5E-41 308.1 21.6 211 27-282 6-226 (244)
29 cd03871 M14_CPB Peptidase M14 100.0 6.8E-38 1.5E-42 324.5 14.2 221 269-505 21-298 (300)
30 cd06246 M14_CPB2 Peptidase M14 100.0 1.2E-37 2.7E-42 323.2 15.7 222 269-505 20-298 (300)
31 cd06247 M14_CPO Peptidase M14 100.0 2.3E-37 4.9E-42 319.9 16.1 222 269-505 19-297 (298)
32 cd06234 M14_Nna1_like_1 A bact 100.0 1.7E-36 3.7E-41 307.3 22.1 224 23-282 5-238 (263)
33 cd03872 M14_CPA6 Carboxypeptid 100.0 3.3E-37 7.2E-42 318.6 15.3 223 269-506 17-296 (300)
34 cd03870 M14_CPA Peptidase M14 100.0 6.6E-37 1.4E-41 317.6 15.6 222 269-506 21-298 (301)
35 cd06908 M14_AGBL4_like Peptida 100.0 3.7E-36 8.1E-41 304.1 20.6 213 38-280 1-226 (261)
36 cd06248 M14_CPA_CPB_like Pepti 100.0 2.5E-36 5.5E-41 314.9 16.5 223 269-504 19-302 (304)
37 cd03862 Peptidase_M14-like_7 A 100.0 2.1E-35 4.5E-40 301.3 20.3 205 59-281 8-240 (273)
38 cd03856 M14_Nna1_like Peptidas 100.0 3.2E-35 7E-40 300.6 18.9 215 27-282 9-241 (269)
39 cd06228 Peptidase_M14-like_3 A 100.0 1.6E-34 3.5E-39 299.8 12.4 206 278-499 4-331 (332)
40 cd06242 Peptidase_M14-like_1_5 100.0 2.9E-32 6.3E-37 278.7 18.3 153 28-211 2-156 (268)
41 cd03860 M14_CP_A-B_like The Pe 100.0 1.3E-32 2.8E-37 287.0 15.3 219 269-504 16-292 (294)
42 cd06239 Peptidase_M14-like_1_2 100.0 7.8E-32 1.7E-36 268.2 14.4 142 41-219 2-143 (231)
43 cd06229 M14_Endopeptidase_I Pe 100.0 1.4E-31 3E-36 273.5 13.7 193 296-497 3-253 (255)
44 PRK10602 murein peptide amidas 100.0 3E-31 6.4E-36 264.4 15.0 185 49-281 15-213 (237)
45 cd06235 M14_Nna1_like_2 Subgro 100.0 1E-30 2.2E-35 266.4 19.0 206 45-280 9-226 (258)
46 cd06238 Peptidase_M14-like_1_1 100.0 7.8E-31 1.7E-35 267.4 16.1 203 54-280 1-253 (271)
47 cd06236 M14_AGBL5_like Peptida 100.0 3.7E-30 7.9E-35 263.9 18.9 203 48-280 15-258 (304)
48 cd06227 Peptidase_M14-like_2 A 100.0 1.8E-30 3.8E-35 265.6 14.8 194 270-478 19-257 (272)
49 smart00631 Zn_pept Zn_pept. 100.0 1.8E-30 3.8E-35 269.0 14.6 205 270-489 17-274 (277)
50 cd06907 M14_AGBL2-3_like Pepti 100.0 1.2E-29 2.6E-34 254.7 18.6 207 45-280 10-227 (261)
51 cd06905 Peptidase_M14-like_8 A 100.0 3.7E-30 8E-35 272.0 13.9 200 269-480 19-339 (360)
52 cd06241 Peptidase_M14-like_1_4 100.0 5.5E-29 1.2E-33 254.3 17.5 163 36-223 1-175 (266)
53 cd03863 M14_CPD_II The second 100.0 2.3E-29 5E-34 268.0 11.6 142 269-422 21-165 (375)
54 cd00596 Peptidase_M14_like The 100.0 3.7E-28 8E-33 239.4 16.8 117 81-221 1-118 (196)
55 cd03869 M14_CPX_like Peptidase 100.0 8.1E-29 1.8E-33 263.8 11.6 143 269-422 20-195 (405)
56 cd06243 Peptidase_M14-like_1_6 100.0 4E-28 8.7E-33 242.7 15.5 126 54-208 1-130 (236)
57 cd06244 Peptidase_M14-like_1_7 100.0 3.2E-27 6.9E-32 237.4 18.4 135 54-215 1-177 (268)
58 cd03867 M14_CPZ Peptidase M14- 99.9 1.6E-27 3.5E-32 257.0 11.2 143 269-422 16-185 (395)
59 cd03868 M14_CPD_I The first ca 99.9 2.2E-27 4.7E-32 255.2 12.0 142 269-422 16-165 (372)
60 cd06245 M14_CPD_III The third 99.9 3E-27 6.5E-32 251.4 12.4 142 269-422 17-161 (363)
61 cd03866 M14_CPM Peptidase M14 99.9 3.1E-27 6.6E-32 252.7 11.4 141 269-422 20-163 (376)
62 cd03857 Peptidase_M14-like_1 P 99.9 6.4E-26 1.4E-30 227.5 19.4 135 54-218 1-141 (226)
63 cd03865 M14_CPE_H Peptidase M1 99.9 5.8E-27 1.3E-31 249.8 11.3 143 269-422 20-191 (402)
64 cd03859 M14_CPT Peptidase M14- 99.9 1.8E-26 3.9E-31 240.6 12.8 217 269-499 19-295 (295)
65 cd03858 M14_CP_N-E_like Carbox 99.9 3.4E-26 7.4E-31 246.8 12.7 143 269-422 16-166 (374)
66 cd06906 M14_Nna1 Peptidase M14 99.9 7.3E-25 1.6E-29 220.8 18.9 217 37-280 3-246 (278)
67 cd06226 M14_CPT_like Peptidase 99.9 1E-25 2.2E-30 232.8 13.1 221 272-501 2-291 (293)
68 cd06240 Peptidase_M14-like_1_3 99.9 2E-25 4.3E-30 227.0 14.0 140 50-209 1-179 (273)
69 cd03864 M14_CPN Peptidase M14 99.9 1.9E-25 4.1E-30 239.1 11.6 143 269-422 16-183 (392)
70 cd06904 M14_MpaA_like Peptidas 99.9 1.1E-24 2.3E-29 210.6 11.9 159 81-282 1-163 (178)
71 cd03862 Peptidase_M14-like_7 A 99.9 3.7E-24 8.1E-29 218.7 13.0 171 295-480 7-241 (273)
72 cd06237 M14_Nna1_like_3 A bact 99.9 3.7E-24 8.1E-29 215.9 12.3 173 274-480 25-226 (244)
73 KOG2649|consensus 99.9 5.3E-24 1.1E-28 223.6 10.6 104 296-400 100-204 (500)
74 PF00246 Peptidase_M14: Zinc c 99.9 6.4E-24 1.4E-28 220.8 7.8 217 269-498 10-279 (279)
75 cd06231 Peptidase_M14-like_4 A 99.9 6.2E-22 1.3E-26 198.6 16.1 125 48-210 14-141 (236)
76 cd03856 M14_Nna1_like Peptidas 99.9 5.9E-22 1.3E-26 202.9 14.0 180 272-482 25-243 (269)
77 cd06232 Peptidase_M14-like_5 P 99.9 1.1E-21 2.3E-26 190.9 13.0 135 29-208 2-143 (240)
78 cd06234 M14_Nna1_like_1 A bact 99.9 3.5E-21 7.5E-26 195.6 14.1 122 274-422 28-149 (263)
79 PRK10602 murein peptide amidas 99.9 1.1E-21 2.4E-26 195.9 9.7 168 296-494 25-226 (237)
80 cd06238 Peptidase_M14-like_1_1 99.8 1.2E-20 2.7E-25 192.7 7.9 119 296-422 6-165 (271)
81 cd06908 M14_AGBL4_like Peptida 99.8 4.2E-20 9.1E-25 187.3 11.5 130 269-423 6-137 (261)
82 cd06242 Peptidase_M14-like_1_5 99.8 1.6E-19 3.4E-24 185.0 11.0 123 270-422 18-142 (268)
83 cd06235 M14_Nna1_like_2 Subgro 99.8 5.6E-19 1.2E-23 180.3 14.1 125 273-422 11-138 (258)
84 cd06239 Peptidase_M14-like_1_2 99.8 1.4E-19 3.1E-24 180.4 9.4 121 268-422 3-123 (231)
85 cd06243 Peptidase_M14-like_1_6 99.8 3.7E-19 8E-24 178.2 10.4 110 296-422 6-119 (236)
86 cd06236 M14_AGBL5_like Peptida 99.7 5.3E-18 1.1E-22 174.4 11.8 115 296-423 26-162 (304)
87 cd06241 Peptidase_M14-like_1_4 99.7 5.2E-18 1.1E-22 173.6 11.2 126 275-422 13-150 (266)
88 cd06904 M14_MpaA_like Peptidas 99.7 3.5E-18 7.6E-23 165.2 8.4 143 318-481 1-164 (178)
89 cd06244 Peptidase_M14-like_1_7 99.7 8.2E-18 1.8E-22 169.5 10.4 113 296-422 6-158 (268)
90 cd06240 Peptidase_M14-like_1_3 99.7 1.1E-17 2.3E-22 170.5 9.1 119 296-422 10-167 (273)
91 cd03857 Peptidase_M14-like_1 P 99.7 1.5E-17 3.3E-22 167.0 10.1 109 296-422 6-120 (226)
92 cd06907 M14_AGBL2-3_like Pepti 99.7 1.3E-16 2.9E-21 160.6 11.3 124 274-422 13-139 (261)
93 KOG3641|consensus 99.6 4.6E-15 1E-19 157.9 10.3 169 23-219 374-551 (650)
94 cd06232 Peptidase_M14-like_5 P 99.6 4.2E-15 9.2E-20 145.0 8.2 108 296-431 25-142 (240)
95 cd06231 Peptidase_M14-like_4 A 99.5 1.4E-14 3E-19 145.6 8.7 101 296-422 26-126 (236)
96 cd00596 Peptidase_M14_like The 99.5 1.1E-14 2.3E-19 143.5 7.0 168 318-498 1-195 (196)
97 cd06906 M14_Nna1 Peptidase M14 99.5 5.5E-14 1.2E-18 142.3 10.2 113 296-422 25-145 (278)
98 PF13715 DUF4480: Domain of un 99.4 1.1E-12 2.5E-17 111.7 11.4 86 509-594 1-87 (88)
99 cd06233 Peptidase_M14-like_6 P 99.4 2.4E-12 5.2E-17 131.6 14.6 117 29-167 3-123 (283)
100 COG2866 Predicted carboxypepti 99.3 5.9E-12 1.3E-16 134.6 9.4 131 19-164 90-222 (374)
101 cd06250 M14_PaAOTO_like An unc 99.3 1.6E-11 3.4E-16 131.5 12.1 97 54-164 5-104 (359)
102 PF13620 CarboxypepD_reg: Carb 99.2 2.7E-11 6E-16 101.6 8.6 76 509-584 1-82 (82)
103 cd06230 M14_ASTE_ASPA_like The 99.2 5.4E-11 1.2E-15 121.8 8.5 103 81-219 1-105 (252)
104 cd06251 M14_ASTE_ASPA_like_1 A 99.2 5.3E-11 1.1E-15 124.1 7.5 118 63-219 9-129 (287)
105 cd06254 M14_ASTE_ASPA_like_4 A 99.2 8.9E-11 1.9E-15 122.5 9.1 120 62-219 5-128 (288)
106 cd06255 M14_ASTE_ASPA_like_5 A 99.1 1.9E-10 4E-15 120.2 11.1 120 55-211 3-125 (293)
107 cd06252 M14_ASTE_ASPA_like_2 A 99.0 1E-09 2.2E-14 115.9 9.0 118 61-218 22-143 (316)
108 cd06253 M14_ASTE_ASPA_like_3 A 99.0 1.7E-09 3.7E-14 113.2 10.3 121 62-218 9-133 (298)
109 TIGR02994 ectoine_eutE ectoine 98.9 2.9E-09 6.2E-14 112.4 9.4 116 62-218 36-156 (325)
110 PF10994 DUF2817: Protein of u 98.9 1.2E-08 2.5E-13 107.7 13.4 114 29-164 3-120 (341)
111 PF04952 AstE_AspA: Succinylgl 98.9 1.3E-09 2.8E-14 114.2 5.9 113 79-218 3-120 (292)
112 cd06250 M14_PaAOTO_like An unc 98.8 4.2E-09 9.2E-14 112.8 7.2 96 294-403 10-106 (359)
113 COG2866 Predicted carboxypepti 98.8 6.3E-09 1.4E-13 111.5 7.0 91 296-401 131-222 (374)
114 cd06233 Peptidase_M14-like_6 P 98.8 9.2E-09 2E-13 105.5 7.9 83 296-400 36-119 (283)
115 cd06251 M14_ASTE_ASPA_like_1 A 98.7 4.4E-08 9.5E-13 102.2 9.7 80 299-402 8-87 (287)
116 PRK02259 aspartoacylase; Provi 98.6 6.1E-08 1.3E-12 101.1 7.9 99 79-209 3-107 (288)
117 COG3608 Predicted deacylase [G 98.6 1.3E-07 2.9E-12 97.9 9.5 111 63-214 38-152 (331)
118 TIGR02994 ectoine_eutE ectoine 98.6 2E-07 4.3E-12 98.6 11.0 206 315-553 47-275 (325)
119 cd06254 M14_ASTE_ASPA_like_4 A 98.6 2.3E-07 5E-12 96.9 10.5 72 314-403 16-87 (288)
120 cd03855 M14_ASTE Peptidase M14 98.6 3.1E-07 6.8E-12 97.2 11.0 100 76-208 40-149 (322)
121 cd06256 M14_ASTE_ASPA_like_6 A 98.6 1.1E-07 2.4E-12 100.4 7.3 97 79-209 35-131 (327)
122 cd06909 M14_ASPA Aspartoacylas 98.5 2.5E-07 5.4E-12 95.8 8.7 98 79-208 1-104 (282)
123 cd06253 M14_ASTE_ASPA_like_3 A 98.5 5.6E-07 1.2E-11 94.3 10.7 75 314-402 18-93 (298)
124 cd06252 M14_ASTE_ASPA_like_2 A 98.5 7.4E-07 1.6E-11 94.3 11.5 68 315-402 34-102 (316)
125 cd06910 M14_ASTE_ASPA_like_7 A 98.5 2.3E-07 4.9E-12 96.1 7.0 112 79-219 1-113 (272)
126 PRK05324 succinylglutamate des 98.4 9E-07 1.9E-11 93.8 10.7 100 76-208 45-153 (329)
127 cd06230 M14_ASTE_ASPA_like The 98.4 4.1E-07 8.9E-12 93.2 7.3 82 318-422 1-82 (252)
128 cd06255 M14_ASTE_ASPA_like_5 A 98.3 8.2E-07 1.8E-11 92.9 6.4 83 296-402 9-92 (293)
129 TIGR03242 arg_catab_astE succi 98.2 3E-06 6.5E-11 89.7 8.9 67 77-164 40-106 (319)
130 PF04952 AstE_AspA: Succinylgl 98.0 4.1E-06 8.8E-11 87.8 4.1 67 315-401 2-69 (292)
131 PF08400 phage_tail_N: Prophag 97.8 0.0001 2.3E-09 66.7 8.9 66 509-574 4-80 (134)
132 COG3608 Predicted deacylase [G 97.8 0.00013 2.8E-09 76.1 10.3 68 314-400 47-114 (331)
133 cd06909 M14_ASPA Aspartoacylas 97.4 0.00074 1.6E-08 70.1 9.6 66 316-403 1-66 (282)
134 PRK15036 hydroxyisourate hydro 97.3 0.00043 9.4E-09 63.6 6.4 57 508-564 27-96 (137)
135 COG2988 Succinylglutamate desu 97.3 0.00053 1.1E-08 69.2 7.4 112 79-218 44-164 (324)
136 PF08308 PEGA: PEGA domain; I 97.2 0.0015 3.3E-08 53.0 7.6 60 523-586 11-70 (71)
137 PRK02259 aspartoacylase; Provi 97.1 0.00052 1.1E-08 71.7 5.1 65 316-402 3-67 (288)
138 KOG3641|consensus 97.1 0.0019 4.1E-08 70.5 8.6 111 296-422 412-522 (650)
139 PRK05324 succinylglutamate des 97.0 0.00091 2E-08 71.1 6.1 70 313-403 45-114 (329)
140 cd06256 M14_ASTE_ASPA_like_6 A 97.0 0.00092 2E-08 70.9 5.7 82 316-422 35-116 (327)
141 PF09892 DUF2119: Uncharacteri 96.9 0.0024 5.2E-08 60.7 7.0 82 79-210 7-88 (193)
142 cd06910 M14_ASTE_ASPA_like_7 A 96.8 0.0006 1.3E-08 70.7 2.3 70 316-402 1-70 (272)
143 cd03855 M14_ASTE Peptidase M14 96.8 0.0021 4.6E-08 68.2 6.5 69 313-402 40-108 (322)
144 cd00421 intradiol_dioxygenase 96.7 0.0046 1E-07 57.8 7.4 46 509-554 13-79 (146)
145 TIGR03242 arg_catab_astE succi 96.7 0.0013 2.9E-08 69.6 4.1 68 314-402 40-107 (319)
146 PF07210 DUF1416: Protein of u 96.6 0.015 3.2E-07 47.8 8.5 54 508-562 8-65 (85)
147 PF10994 DUF2817: Protein of u 96.2 0.022 4.7E-07 60.6 9.7 83 296-400 36-119 (341)
148 PF02369 Big_1: Bacterial Ig-l 95.6 0.064 1.4E-06 46.7 8.3 62 509-570 26-99 (100)
149 KOG1948|consensus 95.6 0.03 6.6E-07 64.1 7.5 68 508-576 316-386 (1165)
150 PF00775 Dioxygenase_C: Dioxyg 95.6 0.049 1.1E-06 52.9 8.1 46 509-554 31-97 (183)
151 cd03458 Catechol_intradiol_dio 95.5 0.041 9E-07 55.9 7.7 64 509-572 106-213 (256)
152 PF14686 fn3_3: Polysaccharide 95.3 0.1 2.2E-06 45.0 8.1 64 509-572 4-85 (95)
153 PF05738 Cna_B: Cna protein B- 95.2 0.082 1.8E-06 42.5 7.1 47 522-568 1-56 (70)
154 COG4073 Uncharacterized protei 95.2 0.036 7.8E-07 51.5 5.4 76 82-208 18-93 (198)
155 TIGR02465 chlorocat_1_2 chloro 95.1 0.062 1.4E-06 54.4 7.4 64 509-572 100-207 (246)
156 cd03462 1,2-CCD chlorocatechol 95.1 0.069 1.5E-06 54.0 7.5 64 509-572 101-208 (247)
157 TIGR02439 catechol_proteo cate 95.0 0.072 1.6E-06 55.0 7.6 64 509-572 130-237 (285)
158 cd03459 3,4-PCD Protocatechuat 94.9 0.073 1.6E-06 50.4 6.9 63 509-571 17-116 (158)
159 cd03460 1,2-CTD Catechol 1,2 d 94.9 0.079 1.7E-06 54.6 7.5 65 509-573 126-234 (282)
160 TIGR02438 catachol_actin catec 94.7 0.094 2E-06 54.0 7.4 65 509-573 134-242 (281)
161 cd03463 3,4-PCD_alpha Protocat 94.6 0.084 1.8E-06 51.3 6.5 46 509-554 38-106 (185)
162 cd03461 1,2-HQD Hydroxyquinol 94.5 0.09 2E-06 54.1 6.7 64 509-572 122-229 (277)
163 TIGR02423 protocat_alph protoc 94.5 0.091 2E-06 51.4 6.4 47 509-555 41-111 (193)
164 smart00634 BID_1 Bacterial Ig- 94.3 0.17 3.7E-06 43.2 7.1 59 509-567 21-90 (92)
165 cd03464 3,4-PCD_beta Protocate 94.2 0.16 3.5E-06 50.6 7.7 46 509-554 67-136 (220)
166 TIGR02422 protocat_beta protoc 94.0 0.23 5E-06 49.5 8.2 47 509-555 62-132 (220)
167 COG3485 PcaH Protocatechuate 3 93.7 0.1 2.2E-06 52.1 5.3 46 508-553 73-141 (226)
168 PF12985 DUF3869: Domain of un 92.9 0.51 1.1E-05 40.9 7.5 71 506-587 20-97 (104)
169 PF09430 DUF2012: Protein of u 92.4 0.28 6E-06 44.4 5.6 51 522-572 7-61 (123)
170 PF12866 DUF3823: Protein of u 92.1 0.59 1.3E-05 46.8 8.0 77 507-585 21-113 (222)
171 PF10670 DUF4198: Domain of un 91.1 0.59 1.3E-05 46.2 6.9 51 509-560 152-212 (215)
172 PF11974 MG1: Alpha-2-macroglo 89.7 0.99 2.1E-05 39.0 6.2 50 509-558 14-69 (97)
173 COG5266 CbiK ABC-type Co2+ tra 89.5 1 2.2E-05 45.3 6.8 52 509-561 173-242 (264)
174 TIGR02962 hdxy_isourate hydrox 88.5 0.89 1.9E-05 40.4 5.1 55 510-564 3-71 (112)
175 PF06488 L_lac_phage_MSP: Lact 84.8 1.6 3.5E-05 42.2 5.0 37 536-572 260-298 (301)
176 PF09892 DUF2119: Uncharacteri 84.2 1.7 3.6E-05 41.8 4.8 48 316-377 7-54 (193)
177 PF00576 Transthyretin: HIUase 83.1 1.4 3E-05 39.2 3.6 53 510-562 3-70 (112)
178 KOG1948|consensus 83.1 2.1 4.6E-05 49.7 5.9 58 509-566 120-181 (1165)
179 PF10794 DUF2606: Protein of u 79.9 14 0.00031 32.7 8.6 53 510-562 44-109 (131)
180 cd03457 intradiol_dioxygenase_ 79.6 4.9 0.00011 39.2 6.4 46 509-554 28-100 (188)
181 COG1470 Predicted membrane pro 77.8 9.8 0.00021 41.7 8.4 74 510-585 189-263 (513)
182 cd05822 TLP_HIUase HIUase (5-h 75.8 5.4 0.00012 35.4 5.0 55 510-564 3-71 (112)
183 cd05469 Transthyretin_like Tra 73.9 7.3 0.00016 34.6 5.3 55 510-564 3-71 (113)
184 smart00095 TR_THY Transthyreti 73.8 7.1 0.00015 35.1 5.3 55 510-564 6-74 (121)
185 cd05821 TLP_Transthyretin Tran 72.3 7.8 0.00017 34.9 5.1 55 510-564 9-77 (121)
186 PF14347 DUF4399: Domain of un 71.4 11 0.00023 32.0 5.5 53 508-563 20-74 (87)
187 COG2988 Succinylglutamate desu 70.7 3.6 7.9E-05 42.2 3.0 31 317-347 45-75 (324)
188 PF01190 Pollen_Ole_e_I: Polle 70.4 8.6 0.00019 33.0 5.0 33 519-551 18-58 (97)
189 COG2351 Transthyretin-like pro 67.8 15 0.00033 32.7 5.8 55 510-564 11-79 (124)
190 COG4073 Uncharacterized protei 67.0 4 8.7E-05 38.3 2.2 45 319-377 18-62 (198)
191 PF03785 Peptidase_C25_C: Pept 61.4 31 0.00067 28.6 6.1 48 523-571 26-81 (81)
192 PF07676 PD40: WD40-like Beta 60.4 3.6 7.7E-05 28.6 0.5 30 354-383 2-31 (39)
193 PF11008 DUF2846: Protein of u 58.6 47 0.001 29.5 7.6 53 522-576 40-96 (117)
194 KOG3006|consensus 56.4 42 0.00091 29.9 6.4 54 509-562 22-89 (132)
195 PF07523 Big_3: Bacterial Ig-l 52.7 28 0.00061 27.5 4.6 48 509-569 18-65 (67)
196 PF10577 UPF0560: Uncharacteri 51.5 29 0.00063 40.8 6.1 60 509-568 2-68 (807)
197 PF05688 DUF824: Salmonella re 50.4 25 0.00054 26.1 3.5 22 509-530 16-37 (47)
198 PF13953 PapC_C: PapC C-termin 48.6 28 0.00061 27.7 4.0 37 513-549 2-40 (68)
199 PF13115 YtkA: YtkA-like 44.6 80 0.0017 26.0 6.4 17 515-531 28-44 (86)
200 TIGR03000 plancto_dom_1 Planct 43.1 81 0.0018 25.9 5.7 34 523-557 11-46 (75)
201 PF01060 DUF290: Transthyretin 41.2 37 0.0008 28.0 3.7 29 518-546 7-43 (80)
202 PF14054 DUF4249: Domain of un 39.8 1.2E+02 0.0027 31.2 8.4 54 521-574 59-123 (298)
203 PF07495 Y_Y_Y: Y_Y_Y domain; 36.5 47 0.001 25.7 3.5 19 543-561 30-49 (66)
204 PF05751 FixH: FixH; InterPro 32.3 1.2E+02 0.0026 27.7 6.2 49 509-557 70-130 (146)
205 PF13860 FlgD_ig: FlgD Ig-like 29.3 1.5E+02 0.0033 24.3 5.6 46 509-559 26-77 (81)
206 PF01835 A2M_N: MG2 domain; I 29.0 3.5E+02 0.0075 22.7 8.9 50 510-559 19-85 (99)
207 smart00557 IG_FLMN Filamin-typ 24.5 2.1E+02 0.0046 24.0 5.8 43 510-562 34-79 (93)
208 PRK15310 fimbrial outer membra 24.2 1.2E+02 0.0025 36.5 5.2 41 509-552 787-827 (895)
209 COG3422 Uncharacterized conser 23.5 85 0.0018 24.3 2.7 33 534-566 5-37 (59)
210 PF07550 DUF1533: Protein of u 20.9 82 0.0018 24.9 2.3 19 549-567 45-63 (65)
No 1
>cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Pro
Probab=100.00 E-value=1e-86 Score=706.06 Aligned_cols=380 Identities=37% Similarity=0.695 Sum_probs=342.2
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHHH
Q psy8322 24 SFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLL 102 (651)
Q Consensus 24 ~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~ 102 (651)
+| +||+|+||.++|++|+++||+++++++||+|+|||+|++|+|++++ .+..+||.|+++|+||||||+|++++++|+
T Consensus 2 ~f-~yh~y~em~~~L~~la~~yP~i~~l~sIGkS~EGR~L~~l~Is~~~~~~~~~kP~v~~~g~iHgrE~ig~~~~l~li 80 (405)
T cd03869 2 DF-KHHNYKDMRQLMKVVNEMCPNITRIYNIGKSYQGLKLYAMEISDNPGEHELGEPEFRYVAGMHGNEVLGRELLLLLM 80 (405)
T ss_pred CC-ccCCHHHHHHHHHHHHHHCCCceEEEEeEECcCCceEEEEEEecCCccccCCCCeEEEEcccCCCcHHHHHHHHHHH
Confidence 56 7899999999999999999999999999999999999999999876 345589999999999999999999999999
Q ss_pred HHHHHHhccCChhHHHhhcCceEEEEeccCccccccccccc---ccCCCCCCCccCcCCCCCCCc----ccCCC------
Q psy8322 103 EHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGN---CRSGRGRNNINNHDLNRQFPD----YFRHN------ 169 (651)
Q Consensus 103 ~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~---r~~~~~r~n~~GvDLNRnf~~----~w~~~------ 169 (651)
++||++|...|+++++||++++|+|+|++|||||+++++++ |.|.++|.||+|||||||||+ +|...
T Consensus 81 ~~L~~~y~~~d~~v~~Ll~~~~i~IvP~~NPDG~e~s~~~~~~~~~Wrk~R~na~GVDLNRNFp~~~~~~W~~~~~~~~~ 160 (405)
T cd03869 81 QFLCQEYLAGNPRVVHLVEETRIHLLPSMNPDGYEKAYEAGSELGGWALGRWTEEGIDINHNFPDLNTILWEAEDKKKVP 160 (405)
T ss_pred HHHHHhhhcCCHHHHHHHhcCeEEEEeeeCCchhhhhhhcCccccccccCccCCCCccccCCCccccccccccccccccc
Confidence 99999986679999999999999999999999999998764 345667899999999999995 78643
Q ss_pred ----CCCCCC---CCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHh
Q psy8322 170 ----RSNIPT---LVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRH 242 (651)
Q Consensus 170 ----~s~~p~---y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (651)
++.+|| |+|+.|++||||+||++|+++++++++.++|||..++.|||+++....
T Consensus 161 ~~~~~~~~Pc~~~Y~G~~~~sEPET~Av~~~i~~~~FvLSanlHgG~lv~~YPyd~~~~~~------------------- 221 (405)
T cd03869 161 RKVPNHHIPIPEWYLSENATVAPETRAVIAWMEKIPFVLGANLQGGELVVSYPYDMTRTPW------------------- 221 (405)
T ss_pred ccccccCCCCccccCCCCCCCcHHHHHHHHHHHhCCceEEEEecCccEEEEcCcccccCCc-------------------
Confidence 134688 999999999999999999999999999999999999999999963220
Q ss_pred hcccCCccccccccccccchhhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEec
Q psy8322 243 NRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVG 322 (651)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~g~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~ 322 (651)
+. ..|
T Consensus 222 --------------------------------------~~---~~~---------------------------------- 226 (405)
T cd03869 222 --------------------------------------AT---QEA---------------------------------- 226 (405)
T ss_pred --------------------------------------cc---cCC----------------------------------
Confidence 00 011
Q ss_pred cccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCC
Q psy8322 323 NIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVT 402 (651)
Q Consensus 323 ~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~ 402 (651)
T Consensus 227 -------------------------------------------------------------------------------- 226 (405)
T cd03869 227 -------------------------------------------------------------------------------- 226 (405)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCChHHHHHHHHHhhccCCCCcCCC--CCCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEeccc
Q psy8322 403 KNKPALTPDTDVFLHLASTYARLHPTMHMKR--PCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCC 480 (651)
Q Consensus 403 ~~~~~~~~~~~~f~~l~~~~a~~~~~~~~~~--~~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~ 480 (651)
..+||+++|+.||..||.+|+.|+... +|... ...+.+||+||+.|||++|||+||.|.+++|+++|+||+||
T Consensus 227 ----~~tpDd~~Fr~LA~~Ya~~h~~M~~~~~~~c~~~-~~~~~~GitNGa~Wy~~~GgmqD~nY~~~ncfEiTlElsc~ 301 (405)
T cd03869 227 ----TPTPDDAVFRWLATSYASTHLLMTDASRRVCHTE-DFQKEDGIINGASWHTVAGSMNDFSYLHTNCFELSVYLGCD 301 (405)
T ss_pred ----CCCCCHHHHHHHHHHHHHhCHHhhcCCCCCCCCc-ccccCCCceeCCeeccCCCcccchhhhccCeEEEEEeccCC
Confidence 248999999999999999999998753 68753 23568999999999999999999999999999999999999
Q ss_pred CCCCCCCcchhhhhchHHHHHHHHhhccceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEe
Q psy8322 481 RYPAPSEIPIHWRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKE 560 (651)
Q Consensus 481 ~~p~~~~i~~~w~~nr~all~~~aqa~~~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~ 560 (651)
|||++++|+.+|.+||++|+.++.+++.||+|.|+|++|.||++|+|.|.|.++.++|..+|.|++.|.||+|+|++++.
T Consensus 302 K~P~~~~L~~~W~~N~~all~~~~~vh~GikG~V~d~~g~~i~~a~i~v~g~~~~v~t~~~GdywRll~pG~y~v~~~a~ 381 (405)
T cd03869 302 KFPHESELPEEWENNKESLLVFMEQVHRGIKGVVRDKTGKGIPNAIISVEGINHDIRTASDGDYWRLLNPGEYRVTAHAE 381 (405)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHhcCceEEEECCCCCcCCCcEEEEecCccceeeCCCCceEEecCCceEEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeEEEEEEeeCC-CceEEEEEE
Q psy8322 561 GYELFRDRIKIPES-TSPVVGAVL 583 (651)
Q Consensus 561 Gy~~~~~~v~v~~~-~~~~~~~~L 583 (651)
||.+.++.++|... ..+.++|+|
T Consensus 382 gy~~~~~~~~v~~~~~~~~~~f~l 405 (405)
T cd03869 382 GYTSSTKNCEVGYEMGPTQCNFTL 405 (405)
T ss_pred CCCcccEEEEEcCCCCceeeccCC
Confidence 99999999988754 455677654
No 2
>cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally ac
Probab=100.00 E-value=3.8e-85 Score=694.82 Aligned_cols=371 Identities=40% Similarity=0.762 Sum_probs=341.2
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHH
Q psy8322 23 MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRL 101 (651)
Q Consensus 23 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~ 101 (651)
.+| +||+|+||.++|++|+++||+++++++||+|+|||+|++++|++++ .+..+||.|+++|+||||||+|++++++|
T Consensus 2 ~~f-~~h~y~ei~~~l~~l~~~~P~i~~l~~IG~S~eGR~I~~l~Is~~~~~~~~~kp~v~~~g~iHg~E~ig~~~~l~l 80 (375)
T cd03863 2 VDF-RHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEPGEPEFKYIGNMHGNEVVGRELLLNL 80 (375)
T ss_pred CCC-ccCCHHHHHHHHHHHHHHCCCcEEEEEcccCCccceEEEEEEecCCCcccCCCCeEEEEccccCCcHHHHHHHHHH
Confidence 356 7899999999999999999999999999999999999999999865 34568999999999999999999999999
Q ss_pred HHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCC
Q psy8322 102 LEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQ 181 (651)
Q Consensus 102 ~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~ 181 (651)
+++||++| +.|++++.||++++|+|||++|||||+++++++|.+.++|.||+|||||||||++|... ..
T Consensus 81 i~~L~~~y-~~d~~v~~ll~~~~i~IvP~~NPDG~e~~~~~~~~~~~~R~n~~GVDLNRNfp~~~~~~----------~~ 149 (375)
T cd03863 81 IEYLCKNF-GTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGGTVGRNNSNNYDLNRNFPDQFFQV----------TD 149 (375)
T ss_pred HHHHHHhc-cCCHHHHHHHhCCEEEEEeccCCchHHheecCCcccccccccCCCcccccCCccccccC----------CC
Confidence 99999998 78999999999999999999999999999999997778899999999999999999753 34
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccccccccccc
Q psy8322 182 SIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEV 261 (651)
Q Consensus 182 ~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (651)
.+||||+||++|++++++.+++++|||+++++||||++...
T Consensus 150 ~~EpEt~Av~~~~~~~~f~l~~~lHsg~~~~~yPy~~~~~~--------------------------------------- 190 (375)
T cd03863 150 PPQPETLAVMSWLKSYPFVLSANLHGGSLVVNYPFDDDEQG--------------------------------------- 190 (375)
T ss_pred CCcHHHHHHHHHHhhCCceEEEEecCCCEEEEccCcCCCcc---------------------------------------
Confidence 67999999999999999999999999999999999995100
Q ss_pred hhhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHH
Q psy8322 262 QAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEY 341 (651)
Q Consensus 262 g~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~ 341 (651)
. ..|
T Consensus 191 --------------------~---~~~----------------------------------------------------- 194 (375)
T cd03863 191 --------------------I---AIY----------------------------------------------------- 194 (375)
T ss_pred --------------------c---ccC-----------------------------------------------------
Confidence 0 011
Q ss_pred HHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHH
Q psy8322 342 LVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLAST 421 (651)
Q Consensus 342 l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~ 421 (651)
..+||++.|+.||..
T Consensus 195 -----------------------------------------------------------------~~~pd~~~~~~la~~ 209 (375)
T cd03863 195 -----------------------------------------------------------------SKSPDDAVFQQLALS 209 (375)
T ss_pred -----------------------------------------------------------------CCCCCHHHHHHHHHH
Confidence 137899999999999
Q ss_pred hhccCCCCcCCCCCCCCcc-ccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchHHHH
Q psy8322 422 YARLHPTMHMKRPCPGNTV-LKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALI 500 (651)
Q Consensus 422 ~a~~~~~~~~~~~~~~~~~-~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~all 500 (651)
|+.+|+.|+.+.+|..... ..|.+||+||+.|||++|||+||+|..++|+++|+||+|||||++++|+.+|.+||++|+
T Consensus 210 ~a~a~~~m~~~~~c~~~~~~~~~~~Gi~nga~wY~~~GgmqDw~y~~~~~~e~T~El~~~k~p~~~~l~~~w~~n~~all 289 (375)
T cd03863 210 YSKENKKMYQGSPCKDLYPTEYFPHGITNGAQWYNVPGGMQDWNYLNTNCFEVTIELGCVKYPKEEELPKYWEQNRRSLL 289 (375)
T ss_pred HHHHHHHHhcCCCCccccccccCCCCccCCceEEecCCChhhhhhhhcCeEEEEEecCcccCCCHHHHHHHHHHHHHHHH
Confidence 9999999999888985433 357899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccceeEEEEc-CCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeCCCceEE
Q psy8322 501 SWLQQVHRGVKGLVLD-ETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVV 579 (651)
Q Consensus 501 ~~~aqa~~~i~G~V~D-~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~~~~~~ 579 (651)
.++.+++++|+|+|+| .+|+||++|+|.|.|++++++||.+|.|++.|++|+|+|+||++||+++++.|.|..++...+
T Consensus 290 ~~~~~~~~gI~G~V~D~~~g~pl~~AtV~V~g~~~~~~Td~~G~f~~~l~pG~ytl~vs~~GY~~~~~~v~V~~~~~~~~ 369 (375)
T cd03863 290 QFMKQVHRGVRGFVLDATDGRGILNATISVADINHPVTTYKDGDYWRLLVPGTYKVTASARGYDPVTKTVEVDSKGAVQV 369 (375)
T ss_pred HHHHHhcCeEEEEEEeCCCCCCCCCeEEEEecCcCceEECCCccEEEccCCeeEEEEEEEcCcccEEEEEEEcCCCcEEE
Confidence 9999999999999999 589999999999999999999999999988899999999999999999999999988888889
Q ss_pred EEEEee
Q psy8322 580 GAVLES 585 (651)
Q Consensus 580 ~~~L~~ 585 (651)
+|.|++
T Consensus 370 ~~~L~~ 375 (375)
T cd03863 370 NFTLSR 375 (375)
T ss_pred EEEecC
Confidence 998863
No 3
>cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3.4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates inclu
Probab=100.00 E-value=1.4e-83 Score=685.63 Aligned_cols=379 Identities=40% Similarity=0.712 Sum_probs=339.4
Q ss_pred CCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322 28 YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV 106 (651)
Q Consensus 28 y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~ 106 (651)
||+|+||.++|++|+++||+++++++||+|+|||+|++++|++++ .+...||.|+++|+|||+||+|++++++|+++||
T Consensus 1 ~h~y~em~~~L~~l~~~yP~i~~l~sIG~SveGR~i~~l~is~~~~~~~~~kp~v~~~g~iHg~E~ig~e~ll~l~~~L~ 80 (392)
T cd03864 1 HHRYDDLVRALYAVQNECPYITRIYSIGRSVEGRHLYVLEFSDNPGIHEPLEPEFKYVGNMHGNEVLGRELLIQLSEFLC 80 (392)
T ss_pred CCCHHHHHHHHHHHHHHCCCeEEEEEeeeccCCceEEEEEecCCCccccCCCCEEEEEcccCCCcHHHHHHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999876 3456799999999999999999999999999999
Q ss_pred HHhccCChhHHHhhcCceEEEEeccCcccccccccccccC---CCCCCCccCcCCCCCCCcccCC-------CC--CCCC
Q psy8322 107 VEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRS---GRGRNNINNHDLNRQFPDYFRH-------NR--SNIP 174 (651)
Q Consensus 107 ~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~---~~~r~n~~GvDLNRnf~~~w~~-------~~--s~~p 174 (651)
++|..+|+++++||++++|+|||++|||||+++.++++.. ..+|.||+|||||||||..|.. .+ ...|
T Consensus 81 ~~y~~~d~~v~~lL~~~~i~ivP~~NPDG~e~~~~~~~~~~~~~~~R~Na~GVDLNRNFp~~~~~~~~~~~~~g~~~~~P 160 (392)
T cd03864 81 EEYRNGNERITRLIQDTRIHILPSMNPDGYEVAARQGPEFNGYLVGRNNANGVDLNRNFPDLNTLMYYNEKYGGPNHHLP 160 (392)
T ss_pred HhcccCCHHHHHHHhcCeEEEEeeeCCchHHhhhccCCCcCccccccccccCcccccCCCcccccchhhhccCCccccCC
Confidence 9885568999999999999999999999999988755422 3579999999999999977531 11 1357
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCcccccc
Q psy8322 175 TLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTS 254 (651)
Q Consensus 175 ~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (651)
|+....+++||||+||++|+++++|++++++|||..++.|||+++....
T Consensus 161 ~~~~~~~~~epET~Av~~~~~~~~fvls~nlHgG~~v~~YPyd~~~~~~------------------------------- 209 (392)
T cd03864 161 LPDNWKSQVEPETLAVIQWMQNYNFVLSANLHGGAVVANYPYDKSREPR------------------------------- 209 (392)
T ss_pred CccccccccCHHHHHHHHHHHhcCcEEEEEccCCceeeeCCcccccccc-------------------------------
Confidence 7766678999999999999999999999999999999999999963220
Q ss_pred ccccccchhhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHH
Q psy8322 255 QSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREI 334 (651)
Q Consensus 255 ~~~~~~~g~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~ 334 (651)
.++ + |
T Consensus 210 ------------------------~~~------~-------------------------------------~-------- 214 (392)
T cd03864 210 ------------------------VRG------F-------------------------------------R-------- 214 (392)
T ss_pred ------------------------ccc------c-------------------------------------c--------
Confidence 000 0 0
Q ss_pred HHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHH
Q psy8322 335 ILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDV 414 (651)
Q Consensus 335 ~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~ 414 (651)
+.....+||+++
T Consensus 215 --------------------------------------------------------------------~~~~~~tpDd~~ 226 (392)
T cd03864 215 --------------------------------------------------------------------RTAYSPTPDDKL 226 (392)
T ss_pred --------------------------------------------------------------------ccccCCCCChHH
Confidence 001135899999
Q ss_pred HHHHHHHhhccCCCCcCCCCCCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhh
Q psy8322 415 FLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRS 494 (651)
Q Consensus 415 f~~l~~~~a~~~~~~~~~~~~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~ 494 (651)
|++||..||.+|+.|+.+..|.+ .|.+||+||+.|||++|||+||.|.+++|+++|+||+|||||++++|+.+|.+
T Consensus 227 f~~la~~ya~~h~~m~~~~~c~~----~f~~gitnGa~wy~~~GgmqD~~Y~~~nc~e~t~el~c~k~p~~~~l~~~w~~ 302 (392)
T cd03864 227 FQKLAKTYSYAHGWMHKGWNCGD----YFDEGITNGASWYSLSKGMQDFNYLHTNCFEITLELSCDKFPPEEELEREWLG 302 (392)
T ss_pred HHHHHHHHHHhCCcccCCCCCcc----cCCCCcccCceeEecCCCchhhhhhccCeeEEEEeccccCCCCHHHHHHHHHH
Confidence 99999999999999999888964 57899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhhccceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeCC
Q psy8322 495 NQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPES 574 (651)
Q Consensus 495 nr~all~~~aqa~~~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~ 574 (651)
||++|+.++.+++.+|+|+|+|++|+||++|+|.|.+.+++++||.+|.|++.|+||+|+|+||+.||++++++|+|..+
T Consensus 303 n~~all~~~~~~~~gI~G~V~D~~g~pi~~A~V~v~g~~~~~~T~~~G~y~r~l~pG~Y~l~vs~~Gy~~~t~~v~V~~~ 382 (392)
T cd03864 303 NREALISYIEQVHQGIKGMVTDENNNGIANAVISVSGISHDVTSGTLGDYFRLLLPGTYTVTASAPGYQPSTVTVTVGPA 382 (392)
T ss_pred HHHHHHHHHHHhcCeEEEEEECCCCCccCCeEEEEECCccceEECCCCcEEecCCCeeEEEEEEEcCceeEEEEEEEcCC
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999877
Q ss_pred CceEEEEEEe
Q psy8322 575 TSPVVGAVLE 584 (651)
Q Consensus 575 ~~~~~~~~L~ 584 (651)
+.+.++|.|+
T Consensus 383 ~~~~~df~L~ 392 (392)
T cd03864 383 EATLVNFQLK 392 (392)
T ss_pred CcEEEeeEeC
Confidence 7777888774
No 4
>cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3.4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine pe
Probab=100.00 E-value=4.8e-83 Score=678.49 Aligned_cols=381 Identities=40% Similarity=0.753 Sum_probs=335.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHHH
Q psy8322 24 SFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLL 102 (651)
Q Consensus 24 ~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~ 102 (651)
+| +||+|+||.++|++|+++||+++++++||+|+|||+|++|+|++++ .+.++||.|+++|+|||+||+|++++++|+
T Consensus 2 ~f-~Yh~y~e~~~~L~~l~~~~p~i~~l~~IG~S~eGR~I~~l~Is~~~~~~~~~kP~v~i~g~iHg~E~ig~~~~l~l~ 80 (402)
T cd03865 2 SF-EYHRYPELREALVSVWLQCPSISRIYTVGRSFEGRELLVIEMSDNPGEHEPGEPEFKYIGNMHGNEAVGRELLIYLA 80 (402)
T ss_pred Cc-ccCCHHHHHHHHHHHHHHCCCceEEEecccccCCCeEEEEEeecCCCCCCCCCCEEEEECCcCCCcHHHHHHHHHHH
Confidence 56 8999999999999999999999999999999999999999999866 345689999999999999999999999999
Q ss_pred HHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccc--c-ccCCCCCCCccCcCCCCCCCcccCC-------CCCC
Q psy8322 103 EHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG--N-CRSGRGRNNINNHDLNRQFPDYFRH-------NRSN 172 (651)
Q Consensus 103 ~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~--~-r~~~~~r~n~~GvDLNRnf~~~w~~-------~~s~ 172 (651)
++||.+|...|+++++||++++|+|||++|||||+++.+. + +.+..+|.||+|||||||||..+.. +++.
T Consensus 81 ~~L~~~y~~~d~~v~~LLd~~~i~IvP~~NPDG~e~~~~~~~~~~~w~~~R~Na~GvDLNRNFp~~~~~~~~~~~~~~~~ 160 (402)
T cd03865 81 QYLCNEYQKGNETIINLIHSTRIHIMPSLNPDGFEKAASQPGELKDWFVGRSNAQGIDLNRNFPDLDRIVYVNEREGGPN 160 (402)
T ss_pred HHHHHhcccCCHHHHHHHhcCEEEEEeeeCCchHHhhhhcCccccchhhhcccccCcccCCCCCcccchhhhhhccCCCc
Confidence 9999988445899999999999999999999999998653 2 3456689999999999999976321 1122
Q ss_pred CC---CCCCC---CCCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhccc
Q psy8322 173 IP---TLVST---SQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSN 246 (651)
Q Consensus 173 ~p---~y~G~---~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (651)
++ .+.++ ....+|||+|+++|+++++|+++.++|||..++.|||+.+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~pEt~Avm~w~~~~~FvlsanlHgG~lva~YP~D~~~~~~----------------------- 217 (402)
T cd03865 161 NHLLKNMKKAVDENTKLAPETKAVIHWIMDIPFVLSANLHGGDLVANYPYDETRSGS----------------------- 217 (402)
T ss_pred cccccccccccccccCCChHHHHHHHHHHhCCcEEEEEccCccEEEECCCCCCCCCC-----------------------
Confidence 11 12222 23678999999999999999999999999999888888852110
Q ss_pred CCccccccccccccchhhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccC
Q psy8322 247 IPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHG 326 (651)
Q Consensus 247 ~~~~~~~~~~~~~~~g~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~ 326 (651)
.. .|
T Consensus 218 ----------------------------------~~----~~-------------------------------------- 221 (402)
T cd03865 218 ----------------------------------AH----EY-------------------------------------- 221 (402)
T ss_pred ----------------------------------cc----cc--------------------------------------
Confidence 00 11
Q ss_pred CCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCC
Q psy8322 327 DEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKP 406 (651)
Q Consensus 327 ~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~ 406 (651)
T Consensus 222 -------------------------------------------------------------------------------- 221 (402)
T cd03865 222 -------------------------------------------------------------------------------- 221 (402)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCChHHHHHHHHHhhccCCCCcCC--CCCCCCc-cccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCC
Q psy8322 407 ALTPDTDVFLHLASTYARLHPTMHMK--RPCPGNT-VLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYP 483 (651)
Q Consensus 407 ~~~~~~~~f~~l~~~~a~~~~~~~~~--~~~~~~~-~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p 483 (651)
..+||+++|++||..||.+|+.|+.. .+|.... ...|.+||+||+.|||++|||+||.|.+++|+++|+||+|||||
T Consensus 222 s~~pDd~~f~~lA~~Ya~~h~~m~~~~~~~c~~~~~~~~f~~GitNGa~Wy~~~GgmqD~ny~~~nc~eiT~El~c~K~P 301 (402)
T cd03865 222 SACPDDAIFKSLARAYSSLNPAMSDPNRPPCRKNDDDSSFVDGTTNGGAWYSVPGGMQDFNYLSSNCFEITVELSCDKFP 301 (402)
T ss_pred cCCCChHHHHHHHHHHHhhCHHhhcCCCCCCCCCCccccCCCCeecCceecccCCcccchhhhccCceEEEEEecCCCCC
Confidence 24899999999999999999999874 4698653 35789999999999999999999999999999999999999999
Q ss_pred CCCCcchhhhhchHHHHHHHHhhccceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeee
Q psy8322 484 APSEIPIHWRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYE 563 (651)
Q Consensus 484 ~~~~i~~~w~~nr~all~~~aqa~~~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~ 563 (651)
++++|+.+|++||++|+.+++|++.+|+|+|+|++|+||++|+|.|++.+++++||.+|.|++.|+||+|+|+|++.||+
T Consensus 302 ~~~~L~~~W~~n~~all~~~~q~~~gI~G~V~D~~g~pI~~AtV~V~g~~~~~~T~~~G~Y~~~L~pG~Ytv~vsa~Gy~ 381 (402)
T cd03865 302 PEETLKQYWEDNKNSLVNYIEQVHRGVKGFVKDLQGNPIANATISVEGIDHDITSAKDGDYWRLLAPGNYKLTASAPGYL 381 (402)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhccceEEEEECCCCCcCCCeEEEEEcCccccEECCCeeEEECCCCEEEEEEEEecCcc
Confidence 99999999999999999999999999999999999999999999999999999999999998899999999999999999
Q ss_pred eEEEEEEeeCCCceEEEEEEe
Q psy8322 564 LFRDRIKIPESTSPVVGAVLE 584 (651)
Q Consensus 564 ~~~~~v~v~~~~~~~~~~~L~ 584 (651)
++++.|+|..++...++|.|+
T Consensus 382 ~~~~~V~V~~~~~~~vdf~Le 402 (402)
T cd03865 382 AVVKKVAVPYSPAVRVDFELE 402 (402)
T ss_pred cEEEEEEEcCCCcEEEeEEeC
Confidence 999999998888888998885
No 5
>cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active a
Probab=100.00 E-value=6.2e-83 Score=676.87 Aligned_cols=360 Identities=35% Similarity=0.641 Sum_probs=334.8
Q ss_pred CCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHHHHHH
Q psy8322 27 NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEHL 105 (651)
Q Consensus 27 ~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L 105 (651)
+||+|+||.++|++|+++||+++++++||+|+|||+|++|+|++++ .+..+||.|+++||||||||+|++++++|+++|
T Consensus 1 ~Yh~y~ei~~~l~~l~~~~p~i~~l~~IG~S~eGR~l~~l~Is~~~~~~~~~kp~v~~~~giHg~E~ig~e~~l~l~~~L 80 (363)
T cd06245 1 RYHHYKELSEFLRGLTLNYPHITNLTSLGQSVEFRPILSLEISNKPNNSEPEEPKIRFVAGIHGNAPVGTELLLALAEFL 80 (363)
T ss_pred CCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCceEEEEEecCCCCCCCCCCCEEEEECCccCCcHHHHHHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999876 345689999999999999999999999999999
Q ss_pred HHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcH
Q psy8322 106 VVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDP 185 (651)
Q Consensus 106 ~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sep 185 (651)
|++| +.|++++.||++++|+|||++|||||+++++++++...+|.||+|||||||||+.| .|+.|+|||
T Consensus 81 ~~~y-~~d~~v~~ll~~~~i~ivP~~NPDG~e~~~~~~~~~~~~r~na~GvDLNRNf~~~~----------~g~~~~sep 149 (363)
T cd06245 81 CMNY-GKNPAVTKLIDRTRIVIVPSLNPDGREKAQEKQCTSKEGHTNAHGKDLDTDFTSNA----------SNMSADVQP 149 (363)
T ss_pred HHHc-cCCHHHHHHHhCCEEEEEeccCCchHHHeecCCCcccCCCCCcccccCCCCCCccc----------CCCCCCCcH
Confidence 9998 78999999999999999999999999999988875556789999999999999754 477999999
Q ss_pred HHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccccccccccchhhh
Q psy8322 186 EVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVI 265 (651)
Q Consensus 186 Et~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 265 (651)
||+||++|+++.++.+++++|||+++++||||++..
T Consensus 150 Et~Av~~~~~~~~f~l~~~lH~~~~~~~yPy~~~~~-------------------------------------------- 185 (363)
T cd06245 150 ETKAIIDNLISKDFTLSVALDGGSVVATYPYDKPVQ-------------------------------------------- 185 (363)
T ss_pred HHHHHHHHHHhCCceEEEEEcCCcEEEEecCCCCCc--------------------------------------------
Confidence 999999999999999999999999999999998410
Q ss_pred cccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHh
Q psy8322 266 DWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVE 345 (651)
Q Consensus 266 dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~ 345 (651)
T Consensus 186 -------------------------------------------------------------------------------- 185 (363)
T cd06245 186 -------------------------------------------------------------------------------- 185 (363)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHhhcc
Q psy8322 346 YIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYARL 425 (651)
Q Consensus 346 y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~a~~ 425 (651)
.+||.+.|+.||..|+.+
T Consensus 186 --------------------------------------------------------------~~pd~~~~~~la~~~a~a 203 (363)
T cd06245 186 --------------------------------------------------------------TVENKETLKHLAKVYANN 203 (363)
T ss_pred --------------------------------------------------------------CCCCHHHHHHHHHHHHHh
Confidence 146788999999999999
Q ss_pred CCCCcCCCC-CCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchHHHHHHHH
Q psy8322 426 HPTMHMKRP-CPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQ 504 (651)
Q Consensus 426 ~~~~~~~~~-~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~all~~~a 504 (651)
|+.|+...+ |+......|.+||+||+.|||++|+|+||+|...+|+++|+||+|||||++++|+.+|++||++++.++.
T Consensus 204 h~~m~~~~~~c~~~~~~~~~~Gitnga~wy~~~g~mqd~~y~~~~~~e~t~e~~~~k~P~~~~l~~~w~~n~~all~~~~ 283 (363)
T cd06245 204 HPTMHLGQPGCPNNSDENIPGGVMRGAEWNSHLGSMKDFSVDFGHCPEITVYTSCCLFPSASQLPDLWAENKKSLLSMIV 283 (363)
T ss_pred ChhhhcCCCCCCCCcccccCCCccccceeecccCCcchhhhhhcCCceeEEEeccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999998765 8765556789999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeCCCceEEEEEEe
Q psy8322 505 QVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAVLE 584 (651)
Q Consensus 505 qa~~~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~~~~~~~~~L~ 584 (651)
+++.+|+|+|+|.+|+||++|+|.|.+.. +++||.+|.|++.|++|+|+|+|+++||++++++|.|..+....++|+|+
T Consensus 284 ~~~~gI~G~V~d~~g~pi~~A~V~v~g~~-~~~T~~~G~y~~~L~pG~y~v~vs~~Gy~~~~~~V~v~~~~~~~~~f~L~ 362 (363)
T cd06245 284 EAHKGVHGVVTDKAGKPISGATIVLNGGH-RVYTKEGGYFHVLLAPGQHNINVIAEGYQQEHLPVVVSHDEASSVKIVLD 362 (363)
T ss_pred HcCcEEEEEEEcCCCCCccceEEEEeCCC-ceEeCCCcEEEEecCCceEEEEEEEeCceeEEEEEEEcCCCeEEEEEEec
Confidence 99999999999999999999999999976 89999999997779999999999999999999999998888788888885
No 6
>cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the cont
Probab=100.00 E-value=6e-78 Score=642.35 Aligned_cols=359 Identities=42% Similarity=0.826 Sum_probs=324.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHHH
Q psy8322 24 SFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLL 102 (651)
Q Consensus 24 ~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~ 102 (651)
+| +||+|+||.++|++|+++||+++++++||+|+|||+|++++|++++ .+..+||.|+++|+||||||+|++++++|+
T Consensus 2 ~~-~Y~~~~ei~~~l~~l~~~~p~i~~l~~IG~S~eGR~i~~l~ig~~~~~~~~~~P~v~~~~~iHg~E~ig~~~~l~l~ 80 (376)
T cd03866 2 DF-NYHNTEQMEAYLKDVNKNYPSITHLHSIGQSVEGRELWVLVLGRFPREHRIGIPEFKYVANMHGNEVVGRELLLHLI 80 (376)
T ss_pred Cc-ccCCHHHHHHHHHHHHHhCCCcEEEEEeeccCCCceEEEEEeccCCccccCCCCeEEEEcccCCCcHHHHHHHHHHH
Confidence 45 8999999999999999999999999999999999999999999865 345679999999999999999999999999
Q ss_pred HHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCC
Q psy8322 103 EHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQS 182 (651)
Q Consensus 103 ~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~ 182 (651)
++||++| +.|+++++||++++|+|||++|||||++++ .+|.+.++|.||+|||||||||++|... ...
T Consensus 81 ~~L~~~y-~~d~~i~~lL~~~~i~ivP~~NPDG~e~~~-~~~~~~~~R~N~~GvDLNRnf~~~w~~~----------~~~ 148 (376)
T cd03866 81 DYLVTSY-GSDPVITRLLNSTRIHIMPSMNPDGFEASK-PDCYYSVGRYNKNGYDLNRNFPDAFEEN----------NEQ 148 (376)
T ss_pred HHHHHhc-CCCHHHHHHHhCCEEEEEeccCCchhhhcc-cccccccccccCCCcccCcCchhhhccC----------CCC
Confidence 9999988 789999999999999999999999999985 6676667899999999999999999764 235
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccccccccccch
Q psy8322 183 IDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQ 262 (651)
Q Consensus 183 sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 262 (651)
+|||++||++|+++++|.+++++|||+++++|||+++....
T Consensus 149 sepEt~al~~~~~~~~~~l~~~~H~~~~~~~YP~~~~~~~~--------------------------------------- 189 (376)
T cd03866 149 RQPETRAVMEWLKSETFVLSANLHGGALVASYPYDNGNGGT--------------------------------------- 189 (376)
T ss_pred CcHHHHHHHHHHHhcCcEEEEEccCCceEEeccccCCCCcc---------------------------------------
Confidence 99999999999999999999999999999999999962110
Q ss_pred hhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHH
Q psy8322 263 AVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYL 342 (651)
Q Consensus 263 ~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l 342 (651)
+. .
T Consensus 190 ------------------~~----~------------------------------------------------------- 192 (376)
T cd03866 190 ------------------GQ----Q------------------------------------------------------- 192 (376)
T ss_pred ------------------cc----c-------------------------------------------------------
Confidence 00 0
Q ss_pred HHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322 343 VVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY 422 (651)
Q Consensus 343 ~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~ 422 (651)
.....+|+...|+.|+..|
T Consensus 193 -------------------------------------------------------------~~~~~~pd~~~~~~la~~~ 211 (376)
T cd03866 193 -------------------------------------------------------------GYRSVSPDDDVFVHLAKTY 211 (376)
T ss_pred -------------------------------------------------------------cCCCCCCCHHHHHHHHHHH
Confidence 0001378999999999999
Q ss_pred hccCCCCcCCCCCCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchHHHHHH
Q psy8322 423 ARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISW 502 (651)
Q Consensus 423 a~~~~~~~~~~~~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~all~~ 502 (651)
+.+|+.|+.+..|.. ...|..||+|++.|||++|+|+||+|..++|+++|+||+|||||++++|+++|++|+++++.+
T Consensus 212 a~~~~~~~~g~~~~~--~~~~~~Gi~nga~~Y~~sG~~~Dw~y~~~~~~~~T~El~~~k~p~~~~l~~~w~~n~~~ll~~ 289 (376)
T cd03866 212 SYNHANMYKGNHCSD--KQSFPSGITNGYQWYPLQGGMQDYNYVWAQCFEITLELSCCKYPPEEQLPAFWEDNKAALIEY 289 (376)
T ss_pred HHhCHHhhCCCCCCc--cccCCCCcccceEEEEcCCCchhhhhhhCceEEEEEEecCCCCCCHHHHHHHHHHhHHHHHHH
Confidence 999999997777875 357899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccceeEEEEcCCCCcccceEEEEeeeee--eeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeCC
Q psy8322 503 LQQVHRGVKGLVLDETGSRLANVSISLAYKNV--SFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPES 574 (651)
Q Consensus 503 ~aqa~~~i~G~V~D~~g~pi~~A~V~i~~~~~--~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~ 574 (651)
+++++.+|+|+|+|.+|+||++|+|.|.++.. .++||.+|.|++.++||+|+|+|++.||+++++++.+..+
T Consensus 290 i~q~~~gI~G~V~D~~g~pi~~A~V~v~g~~~~~~~~T~~~G~y~~~l~pG~Y~v~vsa~Gy~~~~~~v~v~~~ 363 (376)
T cd03866 290 IKQVHLGVKGQVFDSNGNPIPNAIVEVKGRKHICPYRTNVNGEYFLLLLPGKYMINVTAPGFKTVITNVIIPYN 363 (376)
T ss_pred HHHhcCceEEEEECCCCCccCCeEEEEEcCCceeEEEECCCceEEEecCCeeEEEEEEeCCcceEEEEEEeCCC
Confidence 99999999999999999999999999998764 4589999999878999999999999999999999888754
No 7
>cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling.
Probab=100.00 E-value=1.3e-77 Score=645.28 Aligned_cols=374 Identities=41% Similarity=0.753 Sum_probs=332.2
Q ss_pred CCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322 28 YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV 106 (651)
Q Consensus 28 y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~ 106 (651)
||+|+||.++|++|+++||+++++++||+|+|||+|++|+|++++ .+...||.|+++||||||||+|++++++|+++||
T Consensus 1 y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~EGR~i~~l~is~~~~~~~~~kp~v~i~~giHg~E~ig~~~~~~l~~~L~ 80 (395)
T cd03867 1 HHSYSQMVSVLKRTAARCSHIARTYSIGRSFEGRDLLVIEFSSNPGQHELLEPEVKYIGNMHGNEVLGRELLIYLAQFLC 80 (395)
T ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEccccCCCceEEEEEeccCCCcccccCCeEEEEccccCCcHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999865 3345689999999999999999999999999999
Q ss_pred HHhccCChhHHHhhcCceEEEEeccCcccccccccccc---cCCCCCCCccCcCCCCCCCcccCC-------CC-CCC--
Q psy8322 107 VEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC---RSGRGRNNINNHDLNRQFPDYFRH-------NR-SNI-- 173 (651)
Q Consensus 107 ~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r---~~~~~r~n~~GvDLNRnf~~~w~~-------~~-s~~-- 173 (651)
.+|...|++++.||++++|+|||++|||||+++++++| .|.++|.||+|||||||||+.|.. .+ +.+
T Consensus 81 ~~~~~~d~~v~~ll~~~~i~ivP~~NPDG~e~~~~~~~~~~~wr~~R~n~~GvDLNRNf~~~~~~~~~~~~~~g~~~~~~ 160 (395)
T cd03867 81 SEYLLGNQRIQTLINTTRIHLLPSMNPDGYEAAASEGAGYNGWTNGRQNAQNIDLNRNFPDLTSEVYRRRRQRGARTDHI 160 (395)
T ss_pred HhhhcCCHHHHHHhhCcEEEEEeccCCchHHhhhhcCccccccccCCcCCCCcccccCCCcchhhhcchhhcccccccCC
Confidence 98756789999999999999999999999999998775 356679999999999999999864 12 222
Q ss_pred CC---CCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCcc
Q psy8322 174 PT---LVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTL 250 (651)
Q Consensus 174 p~---y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (651)
|| |. .++|||||+||++|++++++.+++++|||+++++||||+++...+
T Consensus 161 p~p~~~~--~~~sepEt~Av~~~~~~~~~~l~~s~Hs~~~~~~yP~~~t~~~~~-------------------------- 212 (395)
T cd03867 161 PIPDSYW--FGKVAPETKAVMKWMRSIPFVLSASLHGGDLVVSYPYDFSRHPLE-------------------------- 212 (395)
T ss_pred CCccccc--cCccCHHHHHHHHHHhhCCceEEEEccCcceeEEcccccccCccc--------------------------
Confidence 44 32 356999999999999999999999999999999999999743210
Q ss_pred ccccccccccchhhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcc
Q psy8322 251 VSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPI 330 (651)
Q Consensus 251 ~~~~~~~~~~~g~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~ 330 (651)
++ .|
T Consensus 213 ------------------------------~~----~~------------------------------------------ 216 (395)
T cd03867 213 ------------------------------EK----MF------------------------------------------ 216 (395)
T ss_pred ------------------------------cc----cc------------------------------------------
Confidence 00 01
Q ss_pred hHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCC
Q psy8322 331 GREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTP 410 (651)
Q Consensus 331 ~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~ 410 (651)
..+|
T Consensus 217 ----------------------------------------------------------------------------~~~~ 220 (395)
T cd03867 217 ----------------------------------------------------------------------------SPTP 220 (395)
T ss_pred ----------------------------------------------------------------------------CCCC
Confidence 1379
Q ss_pred ChHHHHHHHHHhhccCCCCcCCC--CCCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCc
Q psy8322 411 DTDVFLHLASTYARLHPTMHMKR--PCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEI 488 (651)
Q Consensus 411 ~~~~f~~l~~~~a~~~~~~~~~~--~~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i 488 (651)
|.+.|+.||..|+.+|+.|+.+. .|.. ..++.+||+|++.|||++|+|+||+|..++|++||+||+||||||+++|
T Consensus 221 d~~~~~~lA~~~a~a~~~~~~~~~~~~~~--~~~~~g~i~~ga~~Y~~sG~~~Dw~y~~~~~~~~T~EL~~~~~pp~~~i 298 (395)
T cd03867 221 DEKVFKMLARTYADAHPTMSDRSTRRCGG--NFHKRGGIINGAEWYSFSGGMSDFNYLHTNCFEVTVELGCDKFPPEEEL 298 (395)
T ss_pred cHHHHHHHHHHHHHhCccccCCCCCCCcc--ccccCCCceecceeeEcCCCcchhhhhccCceEEEEEecCCCCCCHHHH
Confidence 99999999999999999998643 3654 2456889999999999999999999999999999999999999999999
Q ss_pred chhhhhchHHHHHHHHhhccceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEE
Q psy8322 489 PIHWRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDR 568 (651)
Q Consensus 489 ~~~w~~nr~all~~~aqa~~~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~ 568 (651)
+++|++|+++++.++.+++.+|+|+|+|++|+||++|+|.|.+++++++||.+|.|++.+++|+|+|+|+++||++++++
T Consensus 299 ~~~~~e~~~~l~~~~~~~~~~i~G~V~D~~g~pi~~A~V~v~g~~~~~~Td~~G~y~~~l~~G~y~l~vs~~Gy~~~~~~ 378 (395)
T cd03867 299 YTIWQENKEALLSFMEMVHRGIKGFVKDKDGNPIKGARISVRGIRHDITTAEDGDYWRLLPPGIHIVSAQAPGYTKVMKR 378 (395)
T ss_pred HHHHHHHHHHHHHHHHhccceeEEEEEcCCCCccCCeEEEEeccccceEECCCceEEEecCCCcEEEEEEecCeeeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred EEeeC--CCceEEEEEE
Q psy8322 569 IKIPE--STSPVVGAVL 583 (651)
Q Consensus 569 v~v~~--~~~~~~~~~L 583 (651)
|++.. +....++|+|
T Consensus 379 v~v~~~~~~~~~~d~~l 395 (395)
T cd03867 379 VTLPARMKRAGRVDFVL 395 (395)
T ss_pred EEeCCcCCCceEeeeEC
Confidence 98864 4556777765
No 8
>KOG2649|consensus
Probab=100.00 E-value=6.8e-78 Score=626.97 Aligned_cols=383 Identities=43% Similarity=0.784 Sum_probs=334.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHH
Q psy8322 23 MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRL 101 (651)
Q Consensus 23 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~ 101 (651)
++| .||+|++|+++|+++.++||.+.++++||||+|||+||++.|++.| +|..++|.+.++|+|||+|.+|.|.++++
T Consensus 65 l~f-~hh~y~~m~~~l~~~~~~~p~itrlYSiGkSv~Gr~L~Vle~sd~PgeH~~gePEfKyv~nmHGnE~vGRElll~L 143 (500)
T KOG2649|consen 65 LTF-GHHNYDDLEKALKDFTKRCPNITRLYSIGKSVEGRELWVIEISDRPGEHEPGEPEFKYIGNMHGNEVVGRELLLRL 143 (500)
T ss_pred ccC-CCCCHHHHHHHHHHHHhhCCcceeeeeccccccCceEEEEEcCCCCCcccCCCCcceeeeeccccccccHHHHHHH
Confidence 777 9999999999999999999999999999999999999999999998 88999999999999999999999999999
Q ss_pred HHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCC---------CC
Q psy8322 102 LEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNR---------SN 172 (651)
Q Consensus 102 ~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~---------s~ 172 (651)
+++||.+| ++|+++++|+++++|+|+|.+||||||.+..++|-+.-+|.|++|+|||||||+.+..-. ++
T Consensus 144 ~e~Lc~~y-~~n~~i~~Lv~~trIHlmPSmNPDGyE~a~~~~~~~~~GR~Nang~DLNrnFPd~~~~~~~~~~~~~~n~~ 222 (500)
T KOG2649|consen 144 AEYLCDNY-GKDPRITQLVNNTRIHIMPSMNPDGYEIAKRGDRGWATGRNNANGVDLNRNFPDQFRLVYFIVTFDLLNSH 222 (500)
T ss_pred HHHHHHhc-CCChHHHHHHhhceEEEecccCcchhhhhhcccccceecccCccccchhccCcccccceeeeeeecccccc
Confidence 99999999 999999999999999999999999999999999888889999999999999998854321 11
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCcccc
Q psy8322 173 IPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVS 252 (651)
Q Consensus 173 ~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (651)
.|.|.-.....+|
T Consensus 223 l~~~~~~~~~~~p------------------------------------------------------------------- 235 (500)
T KOG2649|consen 223 LIMFNDDLNLRQP------------------------------------------------------------------- 235 (500)
T ss_pred cccccccccccCc-------------------------------------------------------------------
Confidence 1222223333344
Q ss_pred ccccccccchhhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchH
Q psy8322 253 TSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGR 332 (651)
Q Consensus 253 ~~~~~~~~~g~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~ 332 (651)
++.++|.|+..+||++++.|||++++++||||.+. .+ .
T Consensus 236 -------Et~Avm~W~~~~pFvLSAnLHGG~lvanYPfD~~~-------------~~-----------------~----- 273 (500)
T KOG2649|consen 236 -------ETIAVMKWLRDIPFVLSANLHGGALVANYPFDDTE-------------DK-----------------R----- 273 (500)
T ss_pred -------cHHHHHHHHhhcceeeeccccCCceEEEccccCCc-------------cc-----------------c-----
Confidence 44555555555555555555555566666666400 00 0
Q ss_pred HHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCCh
Q psy8322 333 EIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDT 412 (651)
Q Consensus 333 ~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~ 412 (651)
.....+||+
T Consensus 274 -----------------------------------------------------------------------~~~s~tpDd 282 (500)
T KOG2649|consen 274 -----------------------------------------------------------------------KYYSASPDD 282 (500)
T ss_pred -----------------------------------------------------------------------cccCCCCCc
Confidence 011358999
Q ss_pred HHHHHHHHHhhccCCCCcCCCCCCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhh
Q psy8322 413 DVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHW 492 (651)
Q Consensus 413 ~~f~~l~~~~a~~~~~~~~~~~~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w 492 (651)
.+|++||..||..|+.|+.+..|.........+||+||++||+++|||+||.|.+++||++||||+|+|||++++++.+|
T Consensus 283 ~~F~~La~~YA~~h~~M~~~~~~~~~~~~~~~~GItNGA~Wy~v~GgMqDfnYLhTNCfEiTiElgC~KfP~e~eLp~~W 362 (500)
T KOG2649|consen 283 ATFRFLARIYAKSHRNMSLGKRCECDGNNGSVGGITNGASWYPVYGGMQDWNYLHTNCFEITLELSCEKFPKESELPTLW 362 (500)
T ss_pred HHHHHHHHHHHhhChhhhcCCCCcccccCCCcCceecCcceeecCCcccchhhhhcCeEEEEEEeccccCCchhhhHHHH
Confidence 99999999999999999998888765555555899999999999999999999999999999999999999999999999
Q ss_pred hhchHHHHHHHHhhccceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEee
Q psy8322 493 RSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIP 572 (651)
Q Consensus 493 ~~nr~all~~~aqa~~~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~ 572 (651)
+.||++|+.|+.|++.||+|.|+|.+|+||++|+|.|.|.++.++|-.+|.|++.|+||.|.|++++.||.+.+++|+|.
T Consensus 363 E~Nr~sLl~f~eqvH~GIkG~V~D~~G~~I~NA~IsV~ginHdv~T~~~GDYWRLL~PG~y~vta~A~Gy~~~tk~v~V~ 442 (500)
T KOG2649|consen 363 EYNRKSLLNFVEQVHRGIKGLVFDDTGNPIANATISVDGINHDVTTAKEGDYWRLLPPGKYIITASAEGYDPVTKTVTVP 442 (500)
T ss_pred HhhHHHHHHHHHHHHhccceeEEcCCCCccCceEEEEecCcCceeecCCCceEEeeCCcceEEEEecCCCcceeeEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCceEEEEEEeeee
Q psy8322 573 ESTSPVVGAVLESLL 587 (651)
Q Consensus 573 ~~~~~~~~~~L~~~~ 587 (651)
......++|+|++..
T Consensus 443 ~~~a~~~df~L~~~~ 457 (500)
T KOG2649|consen 443 PDRAARVNFTLQRSI 457 (500)
T ss_pred CCCccceeEEEecCC
Confidence 877778999999865
No 9
>cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at p
Probab=100.00 E-value=3.3e-76 Score=632.76 Aligned_cols=367 Identities=43% Similarity=0.807 Sum_probs=330.6
Q ss_pred CCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322 28 YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV 106 (651)
Q Consensus 28 y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~ 106 (651)
||+|+||.++|++|+++||+++++.+||+|+|||+|++++|++++ .....||.|+++|+||||||+|++++++|+++||
T Consensus 1 Y~~y~ei~~~l~~l~~~~p~~~~l~~iG~S~eGR~i~~l~is~~~~~~~~~kp~v~~~~~iH~~E~ig~~~~l~l~~~L~ 80 (372)
T cd03868 1 YHHYEELTDLLHSLAKKYPNIARLHSIGRSVEGRELWVLRITDNVNRREPGEPMFKYVGNMHGDETVGRQVLIYLAQYLL 80 (372)
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEEEeccccCCCceEEEEEEecCCCCCCCCCCeEEEECCcCCCcHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999875 3345799999999999999999999999999999
Q ss_pred HHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCc
Q psy8322 107 VEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSID 184 (651)
Q Consensus 107 ~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~se 184 (651)
++| ..|++++.||++++|+|||++|||||+++++++| .+..+|.||+|||||||||++|+..+. +.|+||
T Consensus 81 ~~y-~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~~~~~~~R~n~~GvDLNRnf~~~~~~~~~-------~~~~se 152 (372)
T cd03868 81 ENY-GGDERVTELVNTTDIYLMPSMNPDGFERSQEGDCSCGGYGGRENANNVDLNRNFPDQFEGKLQ-------RLSERQ 152 (372)
T ss_pred Hhc-ccCHHHHHHHhCCEEEEEeeeCCchHHhhcccCccccCCCccCCCCCccCCCCCCcccCCcCC-------CCCCCC
Confidence 988 6899999999999999999999999999998884 455678999999999999999976532 689999
Q ss_pred HHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccccccccccchhh
Q psy8322 185 PEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAV 264 (651)
Q Consensus 185 pEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 264 (651)
|||+||++|++++++.+++++|+++++++||||++....+
T Consensus 153 pEt~av~~~~~~~~~~l~~~lH~~~~~~~yP~~~~~~~~~---------------------------------------- 192 (372)
T cd03868 153 PETVAMMKWIRSNPFVLSGNLHGGSVVASYPYDDSSSHNE---------------------------------------- 192 (372)
T ss_pred HHHHHHHHHHhhCCcEEEEEccCccEEEeccccccCCCCC----------------------------------------
Confidence 9999999999999999999999999999999999632200
Q ss_pred hcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHH
Q psy8322 265 IDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVV 344 (651)
Q Consensus 265 ~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~ 344 (651)
.+ .|
T Consensus 193 ----------------~~----~~-------------------------------------------------------- 196 (372)
T cd03868 193 ----------------CG----VY-------------------------------------------------------- 196 (372)
T ss_pred ----------------Cc----cc--------------------------------------------------------
Confidence 00 01
Q ss_pred hhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHhhc
Q psy8322 345 EYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYAR 424 (651)
Q Consensus 345 ~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~a~ 424 (651)
..+||.+.|+.|+..|+.
T Consensus 197 --------------------------------------------------------------~~~pd~~~~~~la~~~a~ 214 (372)
T cd03868 197 --------------------------------------------------------------SKSPDDAVFKYLALTYAN 214 (372)
T ss_pred --------------------------------------------------------------CCCCCHHHHHHHHHHHHh
Confidence 137899999999999999
Q ss_pred cCCCCcCCCC-CCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchHHHHHHH
Q psy8322 425 LHPTMHMKRP-CPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWL 503 (651)
Q Consensus 425 ~~~~~~~~~~-~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~all~~~ 503 (651)
.|..|..+.+ |. ...|..|+++++.|||++|+|+||+|..++|++||+||+|||||++++|+.+|++||++++.++
T Consensus 215 ~~~~~~~~~~~~~---~~~~~~G~~~~~~~Y~~~G~~~Dw~y~~~~~~~~T~El~~~~~p~~~~l~~~w~~n~~al~~~~ 291 (372)
T cd03868 215 NHPTMRTGKPCCE---GETFKDGITNGAHWYDVPGGMQDYNYLHSNCFEITLELSCCKYPPASELPEEWNNNRESLLAYL 291 (372)
T ss_pred hCHHhhCCCCCCc---cccCCCCcccCceeeeCCCCcchhhhhccCeeEEEEEecCCCCCCHHHHHHHHHHhHHHHHHHH
Confidence 9998876544 43 4578999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEE-EEeeCCCceEEEEE
Q psy8322 504 QQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDR-IKIPESTSPVVGAV 582 (651)
Q Consensus 504 aqa~~~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~-v~v~~~~~~~~~~~ 582 (651)
.+++.+|+|+|+|++|+||++|+|.|.+..++++||.+|.|.+.|++|+|+|+|++.||+++++. +.|..++...++|.
T Consensus 292 ~~~~~~i~G~V~d~~g~pv~~A~V~v~~~~~~~~td~~G~y~~~l~~G~Y~l~vs~~Gf~~~~~~~v~v~~g~~~~~~~~ 371 (372)
T cd03868 292 EQVHIGVKGFVRDASGNPIEDATIMVAGIDHNVTTAKFGDYWRLLLPGTYTITAVAPGYEPSTVTDVVVKEGEATSVNFT 371 (372)
T ss_pred HHhCCceEEEEEcCCCCcCCCcEEEEEecccceEeCCCceEEecCCCEEEEEEEEecCCCceEEeeEEEcCCCeEEEeeE
Confidence 99999999999999999999999999999899999999999878999999999999999998886 45666666667765
Q ss_pred E
Q psy8322 583 L 583 (651)
Q Consensus 583 L 583 (651)
|
T Consensus 372 L 372 (372)
T cd03868 372 L 372 (372)
T ss_pred C
Confidence 4
No 10
>cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappr
Probab=100.00 E-value=2e-72 Score=605.78 Aligned_cols=372 Identities=48% Similarity=0.857 Sum_probs=336.5
Q ss_pred CCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCC-CCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322 28 YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPV-HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV 106 (651)
Q Consensus 28 y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~-~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~ 106 (651)
||+|+||.++|++|+++||+++++.+||+|+|||+|++++|++++. ....||.|+|+|++||+||+|++++++|+++|+
T Consensus 1 Y~~y~ei~~~l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~agiH~~E~~g~~~~~~l~~~L~ 80 (374)
T cd03858 1 YHNYAELESFLKEVAANYPNITRLYSIGKSVQGRDLWVLEISDNPGVHEPGEPEFKYVGNMHGNEVVGRELLLRLAQYLC 80 (374)
T ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEcccCCCCCEEEEEEEecCCCCCCCCCceEEEeccccCCchhHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999998652 334799999999999999999999999999999
Q ss_pred HHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHH
Q psy8322 107 VEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPE 186 (651)
Q Consensus 107 ~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepE 186 (651)
.+|...|+.+++||++++|+|||++|||||+++++++|.|..+|.||.|||||||||+.|...+. +|+.|+||||
T Consensus 81 ~~~~~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~w~~~R~n~~GvDLNRnf~~~~~~~~~-----~G~~~~sepE 155 (374)
T cd03858 81 ENYGAGDPRITRLVDNTRIHIMPSMNPDGYEKAAEGDCGGLTGRYNANGVDLNRNFPDLFFTNYR-----SSDNGPRQPE 155 (374)
T ss_pred HHhccCCHHHHHHHhCCEEEEEcccCCchhhhhcccCCcccccCCCCcceecccCCCcccccccc-----cCCCcccCHH
Confidence 98733789999999999999999999999999999998777789999999999999999987644 6999999999
Q ss_pred HHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccccccccccchhhhc
Q psy8322 187 VQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVID 266 (651)
Q Consensus 187 t~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d 266 (651)
++||++++.+++|.+++|+|+++++++|||++++..
T Consensus 156 t~al~~~~~~~~~~~~i~~Hs~~~~~~yp~~~~~~~-------------------------------------------- 191 (374)
T cd03858 156 TKAVMNWIKSIPFVLSANLHGGALVANYPYDDSPSG-------------------------------------------- 191 (374)
T ss_pred HHHHHHHHhhCCceEEEEccCCceEEEcccccCCCc--------------------------------------------
Confidence 999999999999999999999999999999996210
Q ss_pred ccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhh
Q psy8322 267 WMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEY 346 (651)
Q Consensus 267 w~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y 346 (651)
+ .+
T Consensus 192 ---------------~----~~---------------------------------------------------------- 194 (374)
T cd03858 192 ---------------K----RT---------------------------------------------------------- 194 (374)
T ss_pred ---------------c----cc----------------------------------------------------------
Confidence 0 00
Q ss_pred ccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHhhccC
Q psy8322 347 IRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYARLH 426 (651)
Q Consensus 347 ~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~a~~~ 426 (651)
....+||.+.|+.|+..|+..+
T Consensus 195 ----------------------------------------------------------~~~~~~d~~~~~~la~~~a~~~ 216 (374)
T cd03858 195 ----------------------------------------------------------AYSATPDDELFRYLAKTYADAH 216 (374)
T ss_pred ----------------------------------------------------------CCCCCCCHHHHHHHHHHHHHhC
Confidence 0013688999999999999999
Q ss_pred CCCcCCCCCCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchHHHHHHHHhh
Q psy8322 427 PTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQV 506 (651)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~all~~~aqa 506 (651)
+.|++...|.......|..|++++..|||++|+|+||+|..+++++||+||+||++||.++++.+|++|+++++.++.++
T Consensus 217 ~~~~~~~~~~~~~~~~y~~G~~~~~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~p~~~~i~~i~~en~~all~l~~~a 296 (374)
T cd03858 217 PTMHKGGPCCCNDDEEFPGGITNGAAWYSVTGGMQDWNYLHTNCFEITLELSCCKFPPASELPKYWEENREALLAYIEQV 296 (374)
T ss_pred HHhcCCCCCCCcccccCCCCcEEcceeeEcCCCchhhhhhccCceEEEEeccCCCCCChhHhHHHHHHHHHHHHHHHhhc
Confidence 99988766544445678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeC-CCceEEEEEE
Q psy8322 507 HRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPE-STSPVVGAVL 583 (651)
Q Consensus 507 ~~~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~-~~~~~~~~~L 583 (651)
+.+|+|+|+|++|+||++|+|.|.+...+++||.+|.|.+.+++|+|+|+|++.||+++++++.+.. ++...++|.|
T Consensus 297 ~~~i~G~V~d~~g~pl~~A~V~i~~~~~~~~Td~~G~f~~~l~~G~y~l~vs~~Gy~~~~~~v~v~~~g~~~~~~~~l 374 (374)
T cd03858 297 HRGIKGFVRDANGNPIANATISVEGINHDVTTAEDGDYWRLLLPGTYNVTASAPGYEPQTKSVVVPNDNSAVVVDFTL 374 (374)
T ss_pred CCceEEEEECCCCCccCCeEEEEecceeeeEECCCceEEEecCCEeEEEEEEEcCcceEEEEEEEecCCceEEEeeEC
Confidence 9899999999999999999999999999999999999977789999999999999999999888876 6666677654
No 11
>KOG2650|consensus
Probab=100.00 E-value=1.6e-61 Score=511.89 Aligned_cols=269 Identities=25% Similarity=0.386 Sum_probs=233.5
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHH
Q psy8322 18 RPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREI 97 (651)
Q Consensus 18 ~~~~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~ 97 (651)
+....++|.+||+++||++||+.|+++||+++++..||+|+|||+|.+|+|+.+. ...||+|||+|||||||||++++
T Consensus 111 ~~~~~~~~~~Y~~le~I~~~l~~l~~~~P~~v~~~~IG~s~EgR~i~~lkIs~~~--~~~k~~I~id~GiHAREWIspAt 188 (418)
T KOG2650|consen 111 RRSNDFNWERYHSLEEIYEWLDNLAERYPDLVSLIHIGRSYEGRPLKVLKISGGD--NRNKKAIFIDAGIHAREWISPAT 188 (418)
T ss_pred cccccccHHHhcCHHHHHHHHHHHHHhCCCceEEEEcccccCCceEEEEEecCCC--CCCCceEEEecchhHHhhccHHH
Confidence 3344699999999999999999999999999999999999999999999999863 46799999999999999999999
Q ss_pred HHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCCCCC----ccCcCCCCCCCcccCCC-C
Q psy8322 98 ILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRGRNN----INNHDLNRQFPDYFRHN-R 170 (651)
Q Consensus 98 ~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~r~n----~~GvDLNRnf~~~w~~~-~ 170 (651)
++++|++|+..| +.|+.++++|++++|+|+|++|||||+|+++.+| ||+|++.. |.||||||||+++|+.. |
T Consensus 189 a~~~i~qLv~~y-~~~~~~~~ll~~~dwyI~Pv~NPDGYeYS~t~~R~WRKnRs~~~~~~~C~GvDlNRNfd~~W~~~~G 267 (418)
T KOG2650|consen 189 ALWFINQLVSSY-GRDPAVTKLLDKLDWYILPVVNPDGYEYSRTTDRLWRKNRSPNGCASRCIGVDLNRNFDFHWGGGKG 267 (418)
T ss_pred HHHHHHHHHhhh-ccCHHHHHHHhcCcEEEEeeecCCcceeeecccccccccCCCCCCCCeeeCCCCCCCccCcCCCCCC
Confidence 999999999999 8899999999999999999999999999999999 78887655 99999999999999983 4
Q ss_pred -CCCCC---CCCCCCCCcHHHHHHHHHHHhC--CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhc
Q psy8322 171 -SNIPT---LVSTSQSIDPEVQAVIDWMNSV--PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNR 244 (651)
Q Consensus 171 -s~~p~---y~G~~~~sepEt~al~~~~~~~--~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (651)
|++|| |+|++|||||||+||.+|+.+. ++.++|++|+|+|+++|||||++..++|..+..++.+.+.+..+.-.
T Consensus 268 as~~PCse~Y~G~~pfSEpEt~av~~fi~~~~~~i~~yislHSYsQ~llyPyg~~~~~~~~~~dl~~va~~a~~ai~~~~ 347 (418)
T KOG2650|consen 268 ASSDPCSETYAGPSPFSEPETRAVRDFITSFENNIKAYISLHSYSQLLLYPYGYTNDLPEDYEDLQEVARAAADALKSVY 347 (418)
T ss_pred CCCCCCccccCCCCCCCcHHHHHHHHHHHhcCcceEEEEEecccceeEEecccccCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 78999 9999999999999999999986 47999999999999999999998886532221222222222111112
Q ss_pred ccCCccccccccccccchhhhcccC---CCCeEEEEEeeCceecccCCCcc
Q psy8322 245 SNIPTLVSTSQSIDPEVQAVIDWMN---SVPFVMSLQLHGGNVVASYPYDS 292 (651)
Q Consensus 245 ~~~~~~~~~~~~~~~~~g~~~dw~~---~~p~~~t~el~g~~l~~~y~~~~ 292 (651)
...+++++.+..+||++|+++||+. ++|+++++||++. +.|+|.+
T Consensus 348 gt~Y~~G~~~~~~y~asG~S~Dway~~~gi~~~ft~ELrd~---g~~GF~L 395 (418)
T KOG2650|consen 348 GTKYTVGSSADTLYPASGGSDDWAYDVLGIPYAFTFELRDT---GRYGFLL 395 (418)
T ss_pred CCEEEeccccceeeccCCchHHHhhhccCCCEEEEEEeccC---CCCCccC
Confidence 2235667778999999999999994 7999999999987 7889998
No 12
>cd03872 M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also known as CPAH; EC 3.4.17.1), belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA6 prefers large hydrophobic C-terminal amino acids as well as histidine, while peptides with a penultimate glycine or proline are very poorly cleaved. Several neuropeptides are processed by CPA6, including Met- and Leu-enkephalin, angiotensin I, and neurotensin. CPA6 converts enkephalin and neurotensin into forms known to be inactive toward their receptors, but converts inactive angiotensin I into the biologically active angiotensin II. Thus, CPA6 plays a possible role in the regulation of neuropeptides in the extracellular environment within the olfactory bulb where it is highly expresse
Probab=100.00 E-value=6.6e-58 Score=472.52 Aligned_cols=257 Identities=20% Similarity=0.298 Sum_probs=224.5
Q ss_pred CCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322 27 NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV 106 (651)
Q Consensus 27 ~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~ 106 (651)
.||+|+||.+||++|+++||+++++.+||+|+|||+|++|+|+++. ...||.|||+||+|||||+|++++++++++|+
T Consensus 1 ~Y~~~~ei~~~l~~L~~~~p~~v~l~~iG~S~EGR~i~~l~i~~~~--~~~k~~i~i~~giHarEwi~~~~~~~~i~~Ll 78 (300)
T cd03872 1 VYHPLEEIESWMFYMNKTHSDLVHLFSIGKSYEGRSLYVLKLGKRT--RSYKKAVWIDCGIHAREWIGPAFCQWFVKEAL 78 (300)
T ss_pred CCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCCceEEEEEecCC--CCCCCeEEEecccccccccCHHHHHHHHHHHH
Confidence 4999999999999999999999999999999999999999999754 34799999999999999999999999999999
Q ss_pred HHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCC---CCCccCcCCCCCCCcccCCCC-CCCCC---CC
Q psy8322 107 VEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRG---RNNINNHDLNRQFPDYFRHNR-SNIPT---LV 177 (651)
Q Consensus 107 ~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~---r~n~~GvDLNRnf~~~w~~~~-s~~p~---y~ 177 (651)
.+| +.|+.+++||++++|+|||++|||||+++++++| ||+|. +.+|.||||||||+++|...+ +.+|| |+
T Consensus 79 ~~~-~~d~~~~~lL~~~~~~ivP~vNPDGy~ys~~~~r~wrknR~~~~~~~c~GVDLNRNf~~~w~~~g~s~~Pcs~~Y~ 157 (300)
T cd03872 79 NSY-QTDPAMKKMLNQLYFYVMPVFNVDGYHYSWTNDRFWRKTRSKNSRYQCRGVDANRNWKVKWCDEGASLHPCDDTYC 157 (300)
T ss_pred Hhc-cCChHHHHHHhhCeEEEEeeecCCcceeeeccchhhhccCCCCCCCCccccccccccCcccCCCCCCCCCCCCCCC
Confidence 988 7799999999999999999999999999999999 66654 468999999999999998866 67899 99
Q ss_pred CCCCCCcHHHHHHHHHHHhC--CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhc---ccCCcccc
Q psy8322 178 STSQSIDPEVQAVIDWMNSV--PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNR---SNIPTLVS 252 (651)
Q Consensus 178 G~~~~sepEt~al~~~~~~~--~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 252 (651)
|+.|||||||+||++|+.++ ++.+++++|+++++++|||++++..+++ ..+++......++..+ ...+.+++
T Consensus 158 G~~pfSEpEt~al~~~~~~~~~~i~~~ls~Hsyg~~i~~P~g~~~~~~~~---~~~~~~~~~~~~~ai~~~~~~~Y~~g~ 234 (300)
T cd03872 158 GPFPESEPEVKAVAQFLRKHRKHVRAYLSFHAYAQMLLYPYSYKYATIPN---FGCVESAAYNAVNALQSAYGVRYRYGP 234 (300)
T ss_pred CCCCCCcHHHHHHHHHHHhCCccceEEEEEccCCcEEEecCCCcCCCCCC---hHHHHHHHHHHHHHHHHhhCCCCcccC
Confidence 99999999999999999987 4888999999999999999999876542 2233222222222221 23466777
Q ss_pred ccccccccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322 253 TSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS 292 (651)
Q Consensus 253 ~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~ 292 (651)
.+..+|+++|++.||+ .++|+++++||++. +.|+|++
T Consensus 235 ~~~~lY~a~G~s~Dw~y~~~i~~s~t~EL~~~---g~~gF~l 273 (300)
T cd03872 235 ASSTLYVSSGSSMDWAYKNGIPYAFAFELRDT---GYYGFLL 273 (300)
T ss_pred cccceecCCCCHHHHhhcCCCcEEEEEEeCCC---CCCCCcC
Confidence 7888999999999999 48899999999998 7899997
No 13
>cd06247 M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO, also known as metallocarboxypeptidase C; EC 3.4.17.) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPO has not been well characterized as yet, and little is known about it. Based on modeling studies, CPO has been suggested to have specificity for acidic residues rather than aliphatic/aromatic residues as in A-like enzymes or basic residues as in B-like enzymes. It remains to be demonstrated that CPO is functional as an MCP.
Probab=100.00 E-value=2.1e-57 Score=468.86 Aligned_cols=259 Identities=19% Similarity=0.255 Sum_probs=226.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHH
Q psy8322 25 FGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEH 104 (651)
Q Consensus 25 ~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~ 104 (651)
|++||+|+||.++|++|+++||+++++.+||+|+|||+|++|+|+++. ...||.||++|++|||||+|+++++++|++
T Consensus 1 ~~~Y~~~~ei~~~l~~L~~~~p~~v~l~~iG~S~EgR~I~~l~i~~~~--~~~k~~i~i~~giHarEwi~~~~~l~~i~~ 78 (298)
T cd06247 1 YTKYHPMDEIYNWMDQIKEKYSELVSQHYLGCTYELRPMYYLKIGWPS--DKPKKIIWMDCGIHAREWISPAFCQWFVKE 78 (298)
T ss_pred CCCcCCHHHHHHHHHHHHHHCCCcEEEEeceECcCCceEEEEEeecCC--CCCCcEEEEeccccccccccHHHHHHHHHH
Confidence 679999999999999999999999999999999999999999999753 346899999999999999999999999999
Q ss_pred HHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCC---CCCccCcCCCCCCCcccCCCC-CCCCC---
Q psy8322 105 LVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRG---RNNINNHDLNRQFPDYFRHNR-SNIPT--- 175 (651)
Q Consensus 105 L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~---r~n~~GvDLNRnf~~~w~~~~-s~~p~--- 175 (651)
|+++| ..|+.+++||++++|+|||++|||||+++++++| ||+|. +.+|.||||||||+++|+..+ |.+||
T Consensus 79 Ll~~y-~~d~~~~~ll~~~~i~ivP~~NPDGy~ys~~~~r~wRknr~~~~~~~c~GVDLNRNf~~~w~~~g~s~~p~~~~ 157 (298)
T cd06247 79 ILQNY-KTDPILRKVLKNVDFYVLPVLNIDGYIYTWTTDRLWRKNRSPHNNGTCYGVDLNRNFNSQWCSIGASRNCRSNI 157 (298)
T ss_pred HHHHh-ccCHHHHHHHhcCeEEEEeeecCCcceEEecccceecccCCCCCCCCccccccccCCCCccccCCCCCCCCCCC
Confidence 99998 7789999999999999999999999999999998 67665 358999999999999999765 56888
Q ss_pred CCCCCCCCcHHHHHHHHHHHhCC--cEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcc---cCCcc
Q psy8322 176 LVSTSQSIDPEVQAVIDWMNSVP--FVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRS---NIPTL 250 (651)
Q Consensus 176 y~G~~~~sepEt~al~~~~~~~~--~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 250 (651)
|+|+.|||||||+||++++.+.+ +.+++++|+++++++|||++++.++++ ..++++....+++..++ ..+..
T Consensus 158 y~G~~pfSEpEt~ai~~~~~~~~~~i~~~l~~Hsyg~~i~~P~g~~~~~~~n---~~~~~~~a~~~~~ai~~~~~~~y~~ 234 (298)
T cd06247 158 FCGTGPESEPETKAVARLIESKKSDILCYLTIHSYGQLILLPYGYTKEPSSN---HEEMMLVAQKAAAALKEKHGTEYRV 234 (298)
T ss_pred cCCCCCCCcHHHHHHHHHHHhcCcceEEEEEeccCCCeEEeCCcCCCCCCCC---HHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 99999999999999999999986 556999999999999999999877542 23444433333333322 33556
Q ss_pred ccccccccccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322 251 VSTSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS 292 (651)
Q Consensus 251 ~~~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~ 292 (651)
++.+..+|+++|++.||+ .++|+++++||++. ++|+|++
T Consensus 235 g~~~~~~y~a~G~s~Dwa~~~~~~~s~t~El~~~---g~~gF~l 275 (298)
T cd06247 235 GSSALILYSNSGSSRDWAVDIGIPFSYTFELRDN---GTYGFVL 275 (298)
T ss_pred CCcccccccCCCChhhhhhccCCCEEEEEEeCCC---CCCCCCC
Confidence 667788999999999999 48899999999998 7999987
No 14
>cd03870 M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA enzymes generally favor hydrophobic residues. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase A (PCPA) is produced by the exocrine pancreas and stored as a stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. This subfamily includes CPA1, CPA2 and CPA4 forms. Within these A forms, there are slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 p
Probab=100.00 E-value=5.2e-57 Score=467.74 Aligned_cols=260 Identities=21% Similarity=0.302 Sum_probs=226.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHH
Q psy8322 23 MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLL 102 (651)
Q Consensus 23 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~ 102 (651)
++|+.||+|+||.++|++|+++||+++++.+||+|+|||+|++++|+++. ..||.|+|+||+|||||+|++++++++
T Consensus 1 ~~~~~Y~~~~ei~~~l~~L~~~~p~~v~~~~iG~S~eGR~I~~l~is~~~---~~kp~v~i~~giHarE~i~~~~~l~~~ 77 (301)
T cd03870 1 FNYATYHTLDEIYDFMDLLVAEHPNLVSKLQIGRSYEGRPIYVLKFSTGG---SNRPAIWIDAGIHSREWITQATGVWFA 77 (301)
T ss_pred CCccccCCHHHHHHHHHHHHHHCCCceEEEecccCCCCCeEEEEEEecCC---CCCceEEEeccccccchhhHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999764 478999999999999999999999999
Q ss_pred HHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCC---CCCccCcCCCCCCCcccCCCC-CCCCC-
Q psy8322 103 EHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRG---RNNINNHDLNRQFPDYFRHNR-SNIPT- 175 (651)
Q Consensus 103 ~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~---r~n~~GvDLNRnf~~~w~~~~-s~~p~- 175 (651)
++|+.+| +.|+.++.+|++++|+|||++|||||+++++.+| ||+|. ..+|.||||||||+++|+..+ +.+||
T Consensus 78 ~~L~~~~-~~d~~~~~lLd~~~i~ivP~~NPDG~~~s~~~~r~wrknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~~ 156 (301)
T cd03870 78 KKITEDY-GQDPSFTAILDSMDIFLEIVTNPDGYVFTHSQNRLWRKTRSVTSGSLCVGVDPNRNWDAGFGGAGASSNPCS 156 (301)
T ss_pred HHHHHhc-ccCHHHHHHHHhCcEEEEeeecCchhhheecccceeecCCCCCCCCCccccccccCCCcccCcCCCCCCCCc
Confidence 9999988 7789999999999999999999999999998888 66664 358999999999999998765 57899
Q ss_pred --CCCCCCCCcHHHHHHHHHHHhC-CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhc---ccCCc
Q psy8322 176 --LVSTSQSIDPEVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNR---SNIPT 249 (651)
Q Consensus 176 --y~G~~~~sepEt~al~~~~~~~-~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 249 (651)
|+|+.|||||||+||++|+.+. ++.+++++||++++++|||++++..+|+ .+++.+....++...+ ...+.
T Consensus 157 ~~Y~G~~pfSEpEt~av~~~~~~~~~~~~~l~lHS~g~~i~yP~~~~~~~~~~---~~~~~~la~~~~~ai~~~~g~~y~ 233 (301)
T cd03870 157 ETYHGPYANSEVEVKSIVDFVKSHGNFKAFISIHSYSQLLLYPYGYTTQSIPD---KTELNQVAKSAVAALKSLYGTSYK 233 (301)
T ss_pred cccCCCCCCccHHHHHHHHHHhhCCCeEEEEEeccCCceEEecCcCCCCCCCC---HHHHHHHHHHHHHHHHHhcCCccc
Confidence 9999999999999999999987 5999999999999999999999877643 2233222222222121 23355
Q ss_pred cccccccccccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322 250 LVSTSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS 292 (651)
Q Consensus 250 ~~~~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~ 292 (651)
.++.+..+|+++|++.||+ .++++++++||++. ++|+|.+
T Consensus 234 ~g~~~~~~y~a~G~s~Dw~y~~~~~~s~t~El~~~---g~~gF~l 275 (301)
T cd03870 234 YGSIITTIYQASGGSIDWSYNQGIKYSFTFELRDT---GRYGFLL 275 (301)
T ss_pred cccccceeecCCCChhhhhhcCCCcEEEEEEeCCC---CCCCCCC
Confidence 6666778999999999999 48899999999997 6899987
No 15
>cd03871 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients.
Probab=100.00 E-value=9.6e-57 Score=464.99 Aligned_cols=260 Identities=20% Similarity=0.297 Sum_probs=223.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHH
Q psy8322 23 MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLL 102 (651)
Q Consensus 23 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~ 102 (651)
++|++||+|+||.++|++|+++||+++++.+||+|+|||+|++++|+++ ...||.|||+|++|||||+|++++++++
T Consensus 1 ~~~~~Y~~~~ei~~~l~~la~~~p~~v~~~~IG~S~eGR~i~~l~i~~~---~~~kp~v~i~~giHarE~i~~~~~l~~i 77 (300)
T cd03871 1 HSYEKYNNWETIEAWTEQVASENPDLISRSQIGTTFEGRPIYLLKVGKP---GVNKPAIFMDCGFHAREWISPAFCQWFV 77 (300)
T ss_pred CCccccCCHHHHHHHHHHHHHHCCCceEEEEeeeCCCCCeeEEEEEccC---CCCCCeEEEeccccccccccHHHHHHHH
Confidence 4699999999999999999999999999999999999999999999985 3568999999999999999999999999
Q ss_pred HHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCCC---CCccCcCCCCCCCcccCCCC-CCCCC-
Q psy8322 103 EHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRGR---NNINNHDLNRQFPDYFRHNR-SNIPT- 175 (651)
Q Consensus 103 ~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~r---~n~~GvDLNRnf~~~w~~~~-s~~p~- 175 (651)
+.|++.| +.|+.+++||++++|+|||++|||||+++++.+| ||+|.. .+|.|||||||||++|+..+ |.+||
T Consensus 78 ~~l~~~y-~~d~~~~~lL~~~~~~ivP~~NPDG~~~s~~~~r~wrknr~~~~~~~c~GVDLNRNf~~~w~~~g~s~~pc~ 156 (300)
T cd03871 78 REAVRTY-GREAIMTELLDKLDFYVLPVLNIDGYIYTWTKNRMWRKTRSTNAGSSCIGTDPNRNFNAGWCTVGASRNPCD 156 (300)
T ss_pred HHHHHHc-cCCHHHHHHHHcCeEEEEEeecCCcCeeeeccCHHHHHhcCCCCCCCccccccCcCCCCccCCCCCCCCCCC
Confidence 9999998 7889999999999999999999999999999998 676653 45999999999999998765 67899
Q ss_pred --CCCCCCCCcHHHHHHHHHHHhCC--cEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcc---cCC
Q psy8322 176 --LVSTSQSIDPEVQAVIDWMNSVP--FVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRS---NIP 248 (651)
Q Consensus 176 --y~G~~~~sepEt~al~~~~~~~~--~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 248 (651)
|+|+.|||||||+||++|+.+.+ +.+++++|+++++++|||++++..+++ ..++++......+..++ ..+
T Consensus 157 ~~Y~G~~p~SEpEt~Al~~~~~~~~~~~~~~l~~HSyg~~i~~Py~~~~~~~~~---~~~~~~la~~~~~ai~~~~g~~y 233 (300)
T cd03871 157 ETYCGSAPESEKETKALADFIRNNLSSIKAYLTIHSYSQMLLYPYSYTYKLPEN---HAELNSVAKGAVKELASLYGTKY 233 (300)
T ss_pred CCcCCCCCCCCHHHHHHHHHHHhcCcceeEEEEeccCccEEEecCcCCCCCCCC---HHHHHHHHHHHHHHHHHhhCCCC
Confidence 99999999999999999999874 688999999999999999998776542 22332222222222111 223
Q ss_pred ccccccccccccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322 249 TLVSTSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS 292 (651)
Q Consensus 249 ~~~~~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~ 292 (651)
.+++.+..+|+++|++.||+ .++++++++||++. +.|+|.+
T Consensus 234 ~~g~~~~~~Y~a~G~s~Dw~y~~~~~~s~t~El~~~---g~~gf~l 276 (300)
T cd03871 234 TYGPGATTIYPAAGGSDDWAYDQGIKYSFTFELRDK---GRYGFLL 276 (300)
T ss_pred cCCccccccccCCCCHHHHHhcCCCcEEEEEEeCCC---CCCCCCC
Confidence 45555678999999999999 48899999999987 6888887
No 16
>cd06246 M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (CPB2, also known as plasma carboxypeptidase B, carboxypeptidase U, and CPU), belongs to the carboxpeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPB2 enzyme displays B-like activity; it only cleaves the basic residues lysine or arginine. It is produced and secreted by the liver as the inactive precursor, procarboxypeptidase U or PCPB2, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). It circulates in plasma as a zymogen bound to plasminogen, and the active enzyme, TAFIa, inhibits fibrinolysis. It is highly regulated, increased TAFI concentrations are thought to increase the risk of thrombosis and coronary artery disease by reducing fibrinolytic activity whil
Probab=100.00 E-value=1.2e-56 Score=465.22 Aligned_cols=259 Identities=22% Similarity=0.295 Sum_probs=224.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHH
Q psy8322 25 FGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEH 104 (651)
Q Consensus 25 ~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~ 104 (651)
|++||+|+||.++|++|+++||+++++.+||+|+|||+|++|+|+++. ...||.|||+||+|||||+|+++++++|++
T Consensus 2 ~~~Y~~~~ei~~~l~~l~~~~p~~v~~~~iG~S~egR~I~~l~is~~~--~~~k~~v~i~~giHarE~i~~~~~l~~i~~ 79 (300)
T cd06246 2 YEQYHSLNEIYSWIEFITERHSDMLEKIHIGSSFEKRPLYVLKVSGKE--QTAKNAIWIDCGIHAREWISPAFCLWFVGH 79 (300)
T ss_pred CCccCCHHHHHHHHHHHHHHCCCcEEEEecccCCCCCeEEEEEEeCCC--CCCCCeEEEecccCccchhhHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999753 356999999999999999999999999999
Q ss_pred HHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCCC---CCccCcCCCCCCCcccCCCC-CCCCC---
Q psy8322 105 LVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRGR---NNINNHDLNRQFPDYFRHNR-SNIPT--- 175 (651)
Q Consensus 105 L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~r---~n~~GvDLNRnf~~~w~~~~-s~~p~--- 175 (651)
|++.| +.|+.++.||++++|+|||++|||||+++++++| ||+|.. .+|.|||||||||++|...+ +.+||
T Consensus 80 Ll~~~-~~d~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~r~wRknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~~~~ 158 (300)
T cd06246 80 ATQFY-GIDGQMTNLLRHMDFYIMPVMNVDGYDYTWKKNRMWRKNRSFYANSHCIGTDLNRNFDAKWCCEGASSSSCSET 158 (300)
T ss_pred HHHHh-cCCHHHHHHHHhCeEEEEEeecCCceeEEEeccceeecCCCCCCCCCccCcccccccccccCCCCCCCCCCCCC
Confidence 99988 7889999999999999999999999999999988 677653 57999999999999998766 57898
Q ss_pred CCCCCCCCcHHHHHHHHHHHhCC--cEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhc---ccCCcc
Q psy8322 176 LVSTSQSIDPEVQAVIDWMNSVP--FVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNR---SNIPTL 250 (651)
Q Consensus 176 y~G~~~~sepEt~al~~~~~~~~--~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 250 (651)
|+|+.|||||||+||.+|+.+++ +.++|++|+++++++|||++++..+++ ..++++....+++..+ ...+.+
T Consensus 159 y~G~~p~SEpEt~av~~~~~~~~~~i~~~is~Hs~g~~i~~P~~~~~~~~~~---~~~~~~la~~~~~ai~~~~~~~y~~ 235 (300)
T cd06246 159 YCGPYPESEPEVKAVASFLRRHINQIKAYISMHSYSQMILFPYSYTRSKSKD---HEELSLLAKEAVRAIRRTSNNRYTH 235 (300)
T ss_pred cCCCCCCccHHHHHHHHHHHhCCcceeEEEEeccCCcEEEeccccCCCCCCC---HHHHHHHHHHHHHHHHHhhCCCCee
Confidence 99999999999999999999885 778999999999999999999776542 2333332222222221 233555
Q ss_pred ccccccccccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322 251 VSTSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS 292 (651)
Q Consensus 251 ~~~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~ 292 (651)
++.+..+|+++|++.||+ .++++++++|+++. +.|+|.+
T Consensus 236 g~~~~~~Y~a~G~s~Dw~y~~~~~~s~t~El~~~---g~~gF~l 276 (300)
T cd06246 236 GSGAETIYLAPGGSDDWAYDLGIKYSFTFELRDT---GTYGFLL 276 (300)
T ss_pred cCCCCeeeccCCChhhHhhcCCCCEEEEEEecCC---CCCCCCC
Confidence 556778999999999999 48899999999998 7899887
No 17
>cd03859 M14_CPT Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor.
Probab=100.00 E-value=1e-54 Score=452.77 Aligned_cols=193 Identities=32% Similarity=0.460 Sum_probs=178.8
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHH
Q psy8322 26 GNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHL 105 (651)
Q Consensus 26 ~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L 105 (651)
..||+|+||.++|++|+++||+++++++||+|+|||+|++++|++++.....||.|+|+|++||+||+|++++++|++.|
T Consensus 2 ~~y~~y~ei~~~l~~l~~~~p~~v~~~~iG~S~eGR~i~~l~i~~~~~~~~~kp~i~i~~~iH~~E~~g~~~~l~~i~~L 81 (295)
T cd03859 2 RGYHNYLEMVDELNAAAAAYPNLTKVKSIGKSYEGRDIIAVKISDNVATDENKPEVLYTSTHHAREWLSLEMAIYLMHYL 81 (295)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCceEEEeeeecCCCCeEEEEEEecCCCCCCCCCEEEEECCcCccchhhHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999876445679999999999999999999999999999
Q ss_pred HHHhccCChhHHHhhcCceEEEEeccCccccccccc--ccc--cCCCCC-----CCccCcCCCCCCCcccCCC---CCCC
Q psy8322 106 VVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVE--GNC--RSGRGR-----NNINNHDLNRQFPDYFRHN---RSNI 173 (651)
Q Consensus 106 ~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~--~~r--~~~~~r-----~n~~GvDLNRnf~~~w~~~---~s~~ 173 (651)
++++ ..|+.++.+|++++|+|||++|||||+++++ .+| ||+|.+ .||.|||||||||++|... .|.+
T Consensus 82 ~~~~-~~d~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~~~~~wrkn~~~~~~~~~~~~GvDLNRNf~~~w~~~~~g~s~~ 160 (295)
T cd03859 82 LENY-GKDPRIQNLVDNRELWFVPVVNPDGYEYDETTGGYRSWRKNRRDNSGDISSSDGVDLNRNYGYKWGYDSGGSSND 160 (295)
T ss_pred HHhh-ccCHHHHHHHhcCeEEEEeeeCCCcceEEeeccCccceeccCCCCCCCcCcceeecCCCCCCcccCCCCCCCCCC
Confidence 9988 6689999999999999999999999999987 555 666654 5899999999999999873 3678
Q ss_pred CC---CCCCCCCCcHHHHHHHHHHHhC-CcEEEEEEecCceeeeeccccc
Q psy8322 174 PT---LVSTSQSIDPEVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSF 219 (651)
Q Consensus 174 p~---y~G~~~~sepEt~al~~~~~~~-~~~~~i~~H~~~~~~~~P~~~~ 219 (651)
|| |+|+.|||||||+||++++.++ ++.+++++|+++++++|||+++
T Consensus 161 p~~~~y~G~~p~sepEt~av~~~~~~~~~~~~~l~~Hs~g~~i~~P~~~~ 210 (295)
T cd03859 161 PSSETYRGPSAFSEPETQAIRDFVESHKNIKTALNYHTYSNLWLYPYGYQ 210 (295)
T ss_pred CCCCCccCCCCCchHHHHHHHHHHHhCCCeEEEEEeecCCceEEeCCcCC
Confidence 98 9999999999999999999999 8999999999999999999986
No 18
>cd06248 M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/B-like subfamily: This is one of two main M14 carboxypeptidase subfamilies, defined by sequence and structural homology, the other being N/E. Carboxypeptidases (CPs) hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Majority of the proteins in this subfamily have not been characterized as yet. The A/B enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; the proenzymes are called procarboxypeptidases. These enzymes exhibit distinct substrate specificity pattern; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5,
Probab=100.00 E-value=8.8e-55 Score=453.56 Aligned_cols=262 Identities=23% Similarity=0.359 Sum_probs=224.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHH
Q psy8322 25 FGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEH 104 (651)
Q Consensus 25 ~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~ 104 (651)
|++||+|+||.++|++|+++||+++++.+||+|+|||+|++|+|+++......||.|+++|++||+||+|++++++++++
T Consensus 1 ~~~Y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~I~~~~~~~~~k~~v~i~~giHarE~~~~~~~l~~~~~ 80 (304)
T cd06248 1 FDSYHPLEDHLQWLRDLQAAFPNNSELFTIGKSYEGRTILGLHIWGSGGEKGSKPAIVIHGTVHAREWISTMTVEYLAYQ 80 (304)
T ss_pred CCccCCHHHHHHHHHHHHHHCCCceEEeceEECCCCCeEEEEEEecCCCCCCCCcEEEEECCcCcCccccHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999976533457899999999999999999999999999
Q ss_pred HHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCCC---CCccCcCCCCCCCcccCCCC-CCCCC---
Q psy8322 105 LVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRGR---NNINNHDLNRQFPDYFRHNR-SNIPT--- 175 (651)
Q Consensus 105 L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~r---~n~~GvDLNRnf~~~w~~~~-s~~p~--- 175 (651)
|+++| ..|+.++.||++++|+|||++|||||+++++++| ||+|.. .+|.|||||||||++|...+ +.+||
T Consensus 81 L~~~~-~~d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~wRknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~s~~ 159 (304)
T cd06248 81 LLTGY-GSDATVTALLDKFDFYIIPVVNPDGFVYTQTSDRLWRKNRQPTSGSSCVGTDLNRNWPYKWDGGGSSTNPCSET 159 (304)
T ss_pred HHHhh-ccCHHHHHHHHhCcEEEEeeecCchhhhhccchhhhhhcCCCCCCCCceeecCCCCCCCcccCCCCCCCCCCCC
Confidence 99988 6789999999999999999999999999999888 666542 47999999999999999865 57898
Q ss_pred CCCCCCCCcHHHHHHHHHHHhC----CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhc---ccCC
Q psy8322 176 LVSTSQSIDPEVQAVIDWMNSV----PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNR---SNIP 248 (651)
Q Consensus 176 y~G~~~~sepEt~al~~~~~~~----~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 248 (651)
|+|+.|||||||+||++|+.++ ++.+++|+|+++++++|||++++...++ +..++......+++..+ ...+
T Consensus 160 Y~G~~~~sEpEt~av~~~~~~~~~~~~~~~~l~~Hs~~~~i~~P~~~~~~~~~~--d~~~~~~la~~~a~ai~~~~g~~y 237 (304)
T cd06248 160 YRGESPGDAPEAKALAAFLNKLAEGQGIVGYIDWHSYSQLILYPYGYSCDAVPP--NLENLEELAAGLAKAIRAVSGTTY 237 (304)
T ss_pred cCCCCCCccHHHHHHHHHHHhccccCceEEEEEeccCcceEEecCcCCCCCCCC--CHHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999987 4999999999999999999998755321 12233333222222221 1235
Q ss_pred ccccccccccccchhhhcccC---CCCeEEEEEeeCceecccCCCcc
Q psy8322 249 TLVSTSQSIDPEVQAVIDWMN---SVPFVMSLQLHGGNVVASYPYDS 292 (651)
Q Consensus 249 ~~~~~~~~~~~~~g~~~dw~~---~~p~~~t~el~g~~l~~~y~~~~ 292 (651)
+.++.+..+|+++|++.||+. ++++++++|+++. +.|+|++
T Consensus 238 ~~g~~~~~~y~~~G~~~D~~y~~~gi~~~~t~El~~~---~~~gf~~ 281 (304)
T cd06248 238 TVGPACNTLYQTTGSSVDWVYHVAGAAWSYQLELRDT---GTYGFVL 281 (304)
T ss_pred cccccccccccCCCCcchhhhccCCCcEEEEEEeCCC---CCCCCCC
Confidence 566667889999999999994 6689999999997 6888887
No 19
>cd06226 M14_CPT_like Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase (CP) T (CPT)-like proteins. This group belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues and C-terminal positively charged residues. However, CPT does not belong to this CPT-like group.
Probab=100.00 E-value=7.6e-51 Score=419.20 Aligned_cols=176 Identities=26% Similarity=0.419 Sum_probs=158.3
Q ss_pred cCCcEEEEEecccc------CCceEEEEEEcCCCC--CCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhH
Q psy8322 45 YANMTELYSIGKSV------LGKDLLVVNISTAPV--HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNI 116 (651)
Q Consensus 45 ~p~~~~~~~iG~S~------egr~i~~v~i~~~~~--~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~ 116 (651)
||+++++++||+|+ |||+|++|+|+++.. ....||.|+|+|++|||||+|++++++|++.|+++| ..|+++
T Consensus 1 ~p~~~~~~~iG~S~~~~~~~eGR~I~~l~ig~~~~~~~~~~kp~v~i~~~iHarE~ig~~~~l~~i~~L~~~~-~~d~~v 79 (293)
T cd06226 1 YPNLAQWVDIGDSWDKPGGPAGYDIRALKLTNKATNSPTGPKPVFFIMGAIHAREYTTAELVLRFAEDLLEGY-GTDADA 79 (293)
T ss_pred CCcceEEEEeeEecccCcccCCceEEEEEEecCCCCcCCCCCCEEEEECCcCCCcHHHHHHHHHHHHHHHHhc-ccCHHH
Confidence 79999999999999 999999999998653 356899999999999999999999999999999988 778999
Q ss_pred HHhhcCceEEEEeccCcccccccccccc-cCCCC-------CCCccCcCCCCCCCcccCCCCC--CCCC---CCCCCCCC
Q psy8322 117 RFLLDNTRIHLLPNLNPDGSELAVEGNC-RSGRG-------RNNINNHDLNRQFPDYFRHNRS--NIPT---LVSTSQSI 183 (651)
Q Consensus 117 ~~ll~~~~~~iiP~~NPDG~~~~~~~~r-~~~~~-------r~n~~GvDLNRnf~~~w~~~~s--~~p~---y~G~~~~s 183 (651)
+.||++++|+|||++|||||++++++.. ||++. +.||.|||||||||++|...+. .+|| |+|+.|||
T Consensus 80 ~~lL~~~~i~ivP~~NPDG~~~~~~~~~wRkNr~~~~~~~~~~n~~GVDLNRNf~~~w~~~~~~~~~p~~~~y~G~~p~S 159 (293)
T cd06226 80 TWLLDYHEIHVVPIVNPDGRKIAEQGLSQRKNANTSGGSNCSGSSYGVDLNRNYSFGWGGAGASSGDPCSETYRGPAPGS 159 (293)
T ss_pred HHHHhcCeEEEEecccCCcceeeccCcceeccCCCCCCCCccccccccccccCCCCcCCcCCCCCCCCCCCCcCCCCCCC
Confidence 9999999999999999999999876322 66653 4567999999999999987653 6898 99999999
Q ss_pred cHHHHHHHHHHHhCC----------------cEEEEEEecCceeeeeccccccC
Q psy8322 184 DPEVQAVIDWMNSVP----------------FVMSLQLHGGNVVASYPYDSFYG 221 (651)
Q Consensus 184 epEt~al~~~~~~~~----------------~~~~i~~H~~~~~~~~P~~~~~~ 221 (651)
||||+||++|+.+++ +.++|++|+++++++|||+++..
T Consensus 160 EpEt~Av~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~HS~g~~i~~P~g~~~~ 213 (293)
T cd06226 160 EPETAALEDYIRGLFPDQRGPGDTDPAPDDTTGVYLDIHSYSNLVLYPWGWTTQ 213 (293)
T ss_pred cHHHHHHHHHHHhccccccccccccccccccceEEEEeccCCCeEeecCcCCCC
Confidence 999999999999975 78899999999999999999743
No 20
>cd06227 Peptidase_M14-like_2 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=1.4e-49 Score=406.07 Aligned_cols=248 Identities=21% Similarity=0.259 Sum_probs=212.1
Q ss_pred CCC-HHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322 28 YHN-YDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV 106 (651)
Q Consensus 28 y~~-~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~ 106 (651)
||+ ++||.++|++|+++||+ +++.+||+|+|||+|++|+|+........||.|+|+||+|||||+|++++++|++.|+
T Consensus 2 Yh~~~~ei~~~l~~l~~~~p~-~~~~~ig~S~egr~i~~i~~~~~~~~~~~k~~i~i~agiHarE~i~~~~~l~li~~L~ 80 (272)
T cd06227 2 YHTATDEINEEADALVKNIRL-SRLGELIESVKVRNFSSITLNPNGDPSKKKVKALLLFGEHARELISPETGLHLLSNLC 80 (272)
T ss_pred ccCCHHHHHHHHHHHHHHCCC-cEEeeeeeccCCceeeEEEecCCCCCCCCCCEEEEECCccCCchhhHHHHHHHHHHHH
Confidence 899 99999999999999999 8899999999999999999997542114699999999999999999999999999999
Q ss_pred HHhccC---ChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCC--CCCCCCCCC
Q psy8322 107 VEYIRG---DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSN--IPTLVSTSQ 181 (651)
Q Consensus 107 ~~~~~~---d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~--~p~y~G~~~ 181 (651)
.++... ++.++.+|++++|+|||++|||||+++++++|. +|.|++|||||||||++|...+.. ...|+|+.|
T Consensus 81 ~~~~~~~~~~~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~~~---wR~N~~GVDLNRNf~~~w~~~~~~~~~~~y~G~~~ 157 (272)
T cd06227 81 GELAETFDWGDLLKNILDNFDLKIIPNENPDGRKKVESGNYC---LRENENGVDLNRNYGADWGFKEDDYEDEEYSGPAP 157 (272)
T ss_pred HhcccccchhHHHHHHHhcCcEEEEeccCCchheeEeccCcc---cccCCccccccccCCcccccCCCCccccccCCCCC
Confidence 987211 378999999999999999999999999888763 488889999999999999876542 223999999
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccccccc-ccc
Q psy8322 182 SIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSI-DPE 260 (651)
Q Consensus 182 ~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 260 (651)
||||||+||++++.++++.+++++|+++++++|||++++..++ .+..++++.+...+.. ....+++++.+..+ |++
T Consensus 158 ~sEpEt~av~~~~~~~~~~~~i~~Hs~~~~i~~P~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~y~~G~~~~~~~Y~a 234 (272)
T cd06227 158 FSEPETRVLRDLLTSFSPDVFLSVHSGTLALFTPYAYKKEQPE--PNLAEDMRILLLISNK-HCPRCQVGSAGKLVGYLA 234 (272)
T ss_pred CCcHHHHHHHHHHHhCCCeEEEEeccCCCEEEecCCCCCCCCC--CCHHHHHHHHHHHHHH-hCCCCceecCccceeecC
Confidence 9999999999999999999999999999999999999977651 1234556655555442 22346666666666 999
Q ss_pred chhhhcccC---CCCeEEEEEeeCc
Q psy8322 261 VQAVIDWMN---SVPFVMSLQLHGG 282 (651)
Q Consensus 261 ~g~~~dw~~---~~p~~~t~el~g~ 282 (651)
+|++.||+. ++|+++++||+|.
T Consensus 235 ~G~s~Dway~~~gip~s~t~EL~~~ 259 (272)
T cd06227 235 HGTSMDYMYDVLKVPYSFTFEIYGD 259 (272)
T ss_pred CCCHHHHHhhcCCCcEEEEEEccCC
Confidence 999999994 8899999999976
No 21
>cd03860 M14_CP_A-B_like The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the
Probab=100.00 E-value=6e-49 Score=409.83 Aligned_cols=253 Identities=26% Similarity=0.378 Sum_probs=214.4
Q ss_pred CCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHH
Q psy8322 28 YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVV 107 (651)
Q Consensus 28 y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~ 107 (651)
||||+||.++|++|+++||+++++.+||+|.|||+|++++|++++ ...||.|+|+|++||+||+|+++++++++.|+.
T Consensus 1 Y~ty~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~l~i~~~~--~~~k~~v~i~~~~Hg~E~~g~~~~~~~~~~L~~ 78 (294)
T cd03860 1 YHTYDEIYAWLDELAQKYPDLVTVETIGRSYEGRPIKGVKISNGG--RSNKPAIFIDAGIHAREWISPATALYIINQLVE 78 (294)
T ss_pred CCCHHHHHHHHHHHHHHCCCceEEEeeeeCCCCCeEEEEEEecCC--CCCCcEEEEECCcCcCccccHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999864 357899999999999999999999999999998
Q ss_pred HhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCCC---CCccCcCCCCCCCcccCCCC-CCCCC---CCC
Q psy8322 108 EYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRGR---NNINNHDLNRQFPDYFRHNR-SNIPT---LVS 178 (651)
Q Consensus 108 ~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~r---~n~~GvDLNRnf~~~w~~~~-s~~p~---y~G 178 (651)
++ ++.++.||++++|+|||++||||++++++++| ||+|.+ .+|.|||||||||+.|...+ +.+|| |+|
T Consensus 79 ~~---~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~wrknr~~~~~~~~~GvDLNRnf~~~w~~~~~~~~p~~~~y~G 155 (294)
T cd03860 79 SY---DPEVTDLLDNYDWYILPVANPDGYEYTHTTDRLWRKNRSPNSGGGCVGVDLNRNFDYHWGGGGASSDPCSETYAG 155 (294)
T ss_pred cc---CHHHHHHHHcCeEEEEeeecCCchhhhccccchhcccCCCCCCCCceeeccCCCCCCCCccCCCCCCCCCCCccC
Confidence 64 47899999999999999999999999988887 565553 57999999999999998765 56888 999
Q ss_pred CCCCCcHHHHHHHHHHHhC--CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhc----ccCCcccc
Q psy8322 179 TSQSIDPEVQAVIDWMNSV--PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNR----SNIPTLVS 252 (651)
Q Consensus 179 ~~~~sepEt~al~~~~~~~--~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 252 (651)
+.|+|||||+||++++.++ ++.+++|+|+++.+++|||++....++ +.+..+.+...+.... ...+..+.
T Consensus 156 ~~~~sepEt~al~~~~~~~~~~~~~~ld~Hs~~~~i~~P~~~~~~~~~----d~~~~~~la~~~~~~~~~~~g~~Y~~g~ 231 (294)
T cd03860 156 PSAFSEPETRAVRDFLLSLRGRIKAYLSLHSYGQLILYPWGYTSELPP----NYEDLREVAKAAADAIRAVYGTRYTVGS 231 (294)
T ss_pred CCCCchHHHHHHHHHHHhccccEEEEEEeccCCceEEcCCCCCCCCCC----CHHHHHHHHHHHHHHHHHhcCCCCcccc
Confidence 9999999999999999999 799999999999999999999854443 2222223222222111 12344555
Q ss_pred ccccccccchhhhcccC---CCCeEEEEEeeCceecccCCCcc
Q psy8322 253 TSQSIDPEVQAVIDWMN---SVPFVMSLQLHGGNVVASYPYDS 292 (651)
Q Consensus 253 ~~~~~~~~~g~~~dw~~---~~p~~~t~el~g~~l~~~y~~~~ 292 (651)
.+..+||+.|++.||+. ++|+.+++|+++. +.++|.+
T Consensus 232 ~~~~~y~~~G~~~Dw~y~~~~~~~~~t~El~~~---~~~gf~~ 271 (294)
T cd03860 232 SAETLYPASGGSDDWAYGVAGIPYSYTLELRDT---GRYGFLL 271 (294)
T ss_pred ccCccccCCCchhhhhhccCCCcEEEEEEecCC---CCCCCcC
Confidence 56788999999999994 5789999999987 4677775
No 22
>cd06905 Peptidase_M14-like_8 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=3.5e-48 Score=408.80 Aligned_cols=252 Identities=24% Similarity=0.375 Sum_probs=202.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHHHH
Q psy8322 25 FGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLE 103 (651)
Q Consensus 25 ~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~ 103 (651)
|++||+|+||.++|++|+++||+++++.+||+|+|||+|++|+|+++. .....||.|||+|+||||||+|+++++++++
T Consensus 1 ~~~Y~ty~ei~~~L~~La~~~P~lv~l~~IG~S~EGR~I~~l~Is~~~~~~~~~Kp~I~i~~giHarEwig~~~~l~li~ 80 (360)
T cd06905 1 FSRYYRYDELTAALQAWASAYPQLCSLESIGKSYEGRDIWLLTLTNQATGPDREKPAFWIDANIHATEVTGSAVALYVIQ 80 (360)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCCceEEEEecCCCCCCCCCCcEEEEecCCCCCchHHHHHHHHHHH
Confidence 678999999999999999999999999999999999999999999764 2345799999999999999999999999999
Q ss_pred HHHHHhccCChhHHHhhcCceEEEEeccCccccccccc-ccc--cCCCCC------------------C-----------
Q psy8322 104 HLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVE-GNC--RSGRGR------------------N----------- 151 (651)
Q Consensus 104 ~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~-~~r--~~~~~r------------------~----------- 151 (651)
+|+++| +.++++++||++++|+|||++|||||+++++ ++| ||+|.. .
T Consensus 81 ~Ll~~y-~~d~~i~~lLd~~~~~IvP~vNPDG~e~~~~~~~r~wRk~r~~~~~~~~~~g~~~~D~n~D~~~~~mr~~d~~ 159 (360)
T cd06905 81 TLLNGY-GSDPEVTRLLDGYTFYILPRLNPDGAEQALTHPPYVRRSSRRPYPYPDRIDGLYPEDIDGDGLILQMRVKDPC 159 (360)
T ss_pred HHHHhc-cCCHHHHHHHhcCeEEEEeeeCCChheEEeeccccccccCCCCcccccccccccccccCccchhheeeccccc
Confidence 999988 6789999999999999999999999999998 666 443321 0
Q ss_pred ----------------------------------------------CccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcH
Q psy8322 152 ----------------------------------------------NINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDP 185 (651)
Q Consensus 152 ----------------------------------------------n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sep 185 (651)
.|.|||||||||++|...+ ...|+|+.|||||
T Consensus 160 g~w~~~~~~p~~m~~~~~~~~~g~~y~~~~eg~~~~~dg~~~~~~~~~~GvDlNRNf~~~W~~~~--~~~y~G~~p~SEp 237 (360)
T cd06905 160 GAWKVSERDPRIMVRREPDEFGGTYYRLLPEGLIRNYDGYNIKIAPPLEGLDFNRNFPHDWRPEG--EQYGAGPFPFSEP 237 (360)
T ss_pred cccccccccchhhccccccccCceeeeecccccccccccccccccccccCCCcccCcCCCCCCCC--CcCCCCCCCCChH
Confidence 1269999999999997643 2358999999999
Q ss_pred HHHHHHHHHHhC-CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcc----cCCcccccccccccc
Q psy8322 186 EVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRS----NIPTLVSTSQSIDPE 260 (651)
Q Consensus 186 Et~al~~~~~~~-~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 260 (651)
||+||++|+.++ ++.++|++|++++++||||++++.... +.++......+.+.+..... ..++.+ .....+++
T Consensus 238 Et~av~~~~~~~~~i~~~is~Hsyg~~il~P~g~~~~~~~-~~~~~~~~~~la~~~~~~~~y~~~~~~~~~-~~~~~~~~ 315 (360)
T cd06905 238 ETRAVVEFWTDHPNINGFISYHTYSGVILRPYSDKPDDQM-PVDDLELYKALGEKGEELTGYPTVSVYHEF-RYHPKEVT 315 (360)
T ss_pred HHHHHHHHHhcCCCeEEEEEecCCcCeeeeCCCCCcCcCC-ChhhHHHHHHHHHHHHHhcCccccccccce-ecCCcccc
Confidence 999999999987 489999999999999999999876432 12222222222222211100 000111 01223489
Q ss_pred chhhhcccC---CCCeEEEEEeeCc
Q psy8322 261 VQAVIDWMN---SVPFVMSLQLHGG 282 (651)
Q Consensus 261 ~g~~~dw~~---~~p~~~t~el~g~ 282 (651)
+|++.||+. ++ +++++||++.
T Consensus 316 ~G~~~Dw~y~~~gi-~s~t~EL~~~ 339 (360)
T cd06905 316 YGAFDDWAYDHLGI-FAFTVELWDL 339 (360)
T ss_pred cCChhhhhhhcCCe-EEEEEEcCCC
Confidence 999999994 77 9999999997
No 23
>smart00631 Zn_pept Zn_pept.
Probab=100.00 E-value=3.3e-47 Score=393.84 Aligned_cols=248 Identities=31% Similarity=0.473 Sum_probs=210.2
Q ss_pred CCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHH
Q psy8322 28 YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVV 107 (651)
Q Consensus 28 y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~ 107 (651)
||||+||.++|++|+++||+++++.+||+|.+||+|++++|++++ ...||.|+|+|++||+||+|++++++|++.|+.
T Consensus 1 y~ty~e~~~~l~~l~~~~~~~v~~~~iG~S~~Gr~i~~~~i~~~~--~~~k~~v~i~a~~Hg~E~~g~~~~~~~i~~L~~ 78 (277)
T smart00631 1 YHSYEEIEAWLKELAARYPDLVRLVSIGKSVEGRPIWVLKISDGG--SHNKPAIFIDAGIHAREWIGPATALYLINQLLE 78 (277)
T ss_pred CCCHHHHHHHHHHHHHHCCCceEEEeceecCCCCceEEEEEeCCC--CCCCcEEEEECCccccccccHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999864 346899999999999999999999999999999
Q ss_pred HhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCC---CccCcCCCCCCCcccCCCCCCCCC---CCCCCC
Q psy8322 108 EYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRN---NINNHDLNRQFPDYFRHNRSNIPT---LVSTSQ 181 (651)
Q Consensus 108 ~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~---n~~GvDLNRnf~~~w~~~~s~~p~---y~G~~~ 181 (651)
++ +.++.++.+|++++|+|||++||||+++.++++|.+.++|. ||+|||||||||..|.. +.+|| |+|+.|
T Consensus 79 ~~-~~~~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~wr~~r~~~~~~~GvDLNRnf~~~w~~--~~~p~~~~y~G~~~ 155 (277)
T smart00631 79 NY-GRDPRITKLLDKTDIYIVPVLNPDGYEYTHTGDRLWRKNRSPNSNCRGVDLNRNFPFHWGK--TGNPCSETYAGPSP 155 (277)
T ss_pred hc-ccCHHHHHHHHcCcEEEEEeecCchhhheecccccccCCCCCCCCCcCcccCCCCCCCCCC--CCCCCCCCcCCCCC
Confidence 88 56899999999999999999999999999988884434444 89999999999999988 67787 999999
Q ss_pred CCcHHHHHHHHHHHhC-CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhccc---CCccccccccc
Q psy8322 182 SIDPEVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSN---IPTLVSTSQSI 257 (651)
Q Consensus 182 ~sepEt~al~~~~~~~-~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 257 (651)
||||||+||++++.++ ++.+++|+|+++.+++|||++.....+++. ..+...+..+++...+. .+..+..+..+
T Consensus 156 ~sepEt~ai~~~~~~~~~~~~~id~Hs~~~~i~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~y~~g~~~~~~ 233 (277)
T smart00631 156 FSEPETKAVRDFIRSNRRFVLYIDLHSYSQLILYPYGYTKNDLPPNV--DDLDAVAKALAKALASVHGTRYTYGISNGAI 233 (277)
T ss_pred CCcHHHHHHHHHHHhcCCeeEEEEeccCCcEEEecCcCCCCCCCCCH--HHHHHHHHHHHHHHHHhcCCccccccccCcc
Confidence 9999999999999999 899999999999999999999876432211 11222222222222211 23445556667
Q ss_pred cccchhhhcccC---CCCeEEEEEeeCc
Q psy8322 258 DPEVQAVIDWMN---SVPFVMSLQLHGG 282 (651)
Q Consensus 258 ~~~~g~~~dw~~---~~p~~~t~el~g~ 282 (651)
|++.|++.||+. ++++++++|+.+.
T Consensus 234 y~~~G~~~D~~~~~~gi~~~~t~El~~~ 261 (277)
T smart00631 234 YPASGGSDDWAYGTLGIPFSFTLELRDD 261 (277)
T ss_pred cCCCCchhhhhhccCCCcEEEEEEecCC
Confidence 999999999994 6789999999987
No 24
>cd06228 Peptidase_M14-like_3 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=1.3e-47 Score=397.37 Aligned_cols=235 Identities=19% Similarity=0.221 Sum_probs=189.2
Q ss_pred eccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhcc-----------CChhHHHhhcC
Q psy8322 54 IGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIR-----------GDSNIRFLLDN 122 (651)
Q Consensus 54 iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~-----------~d~~~~~ll~~ 122 (651)
-++|+|||+|++|+|+.+. ...||.|||+|++|||||++++++++||++||..|.. .|++++.||+
T Consensus 6 ~~~S~EgR~I~~l~I~~~~--~~~kp~V~i~ggiHAREwis~~~~l~~i~~Ll~~y~~~~~~~yg~~~~~d~~v~~lL~- 82 (332)
T cd06228 6 PHKTYEGRTPHGAKIGAGT--LTSRYGALFIGGVHARERGSPDNLIYFVSDLLNARKAGRGIKYGGRTYTAADVKAILD- 82 (332)
T ss_pred CCCCCCCCeeEEEEEeCCC--CCCCCEEEEEccccccchhhHHHHHHHHHHHHHhhhccccccccccccccHHHHHHHh-
Confidence 4789999999999999853 3569999999999999999999999999999998731 4788999999
Q ss_pred ceEEEEeccCcccccccccccc--cCCCCC------CCccCcCCCCCCCcccCC-----------CCCCCCC---CCCCC
Q psy8322 123 TRIHLLPNLNPDGSELAVEGNC--RSGRGR------NNINNHDLNRQFPDYFRH-----------NRSNIPT---LVSTS 180 (651)
Q Consensus 123 ~~~~iiP~~NPDG~~~~~~~~r--~~~~~r------~n~~GvDLNRnf~~~w~~-----------~~s~~p~---y~G~~ 180 (651)
++|+|||++|||||+++++.+| ||+|.+ .+|.||||||||+++|+. +.|.+|| |+|+.
T Consensus 83 ~~i~IvP~vNPDGy~~s~~~~r~WRKNr~~~~~~~~~~c~GVDLNRNf~~~W~~~~~~~~~~~~~g~S~~Pcse~Y~G~~ 162 (332)
T cd06228 83 AGIVVFPLVNPDGRAHDQTANSCWRKNRNPASAGPNPSSVGVDINRNFDFLWDFQKYFDPGASRSVASTDPASETFHGTA 162 (332)
T ss_pred CeEEEEEeecCcchhheeccchhhhccCCCCcccccCcccccccCCCCCCCcCcccccccccccCCCCCCCCccccCCCC
Confidence 9999999999999999999888 676653 279999999999999973 2367999 99999
Q ss_pred CCCcHHHHHHHHHHHhCC-cEEEEEEecCceeeeeccccccCCCCC----------------------------CCCc-h
Q psy8322 181 QSIDPEVQAVIDWMNSVP-FVMSLQLHGGNVVASYPYDSFYGESKN----------------------------NINN-H 230 (651)
Q Consensus 181 ~~sepEt~al~~~~~~~~-~~~~i~~H~~~~~~~~P~~~~~~~~~~----------------------------~~~~-~ 230 (651)
|||||||+||++++++.+ +.++|++|+++++++|||+|++..+.+ ...+ +
T Consensus 163 pfSEPET~av~~~~~~~~~~~~yls~HSygq~il~P~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (332)
T cd06228 163 AFSEPETRNVVWVMDTFKNIRWFVDLHSYGGDVLYSWGDDENQSTNPAMNFMNPAYDGKRGIVAAPDTRYGEYIDSDDWD 242 (332)
T ss_pred CCccHHHHHHHHHHhccCCeEEEEEeccCCceEEecccCCccccccccccccccccccccccccccccccccccCCCCHH
Confidence 999999999999999986 999999999999999999999753210 0112 2
Q ss_pred hhhhhhhHHHHhhc---ccCCccccccccccccchhhhcccC---------CCCeEEEEEeeCceecccCCCcc
Q psy8322 231 DLNRQFPDYFRHNR---SNIPTLVSTSQSIDPEVQAVIDWMN---------SVPFVMSLQLHGGNVVASYPYDS 292 (651)
Q Consensus 231 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~dw~~---------~~p~~~t~el~g~~l~~~y~~~~ 292 (651)
++++....++.... ...+.+++ +..+||++|+++||+. +.++++++||++..--+.|+|.+
T Consensus 243 ~l~~~a~~~~~ai~~~~g~~Y~~g~-~~~lY~~sG~s~D~ay~~~~~~~~~~~~~s~t~El~~~~~~~~~gF~~ 315 (332)
T cd06228 243 AAVNLAARMGLAMAAARGRIYTVSQ-SVGLYPTSGASDDYAFSRHFADAVKRKVFSYTIEFGETNSEAECPFYP 315 (332)
T ss_pred HHHHHHHHHHHHHHHHhCCCceeCC-cccccCCCCChhhhhhhccccccccCceEEEEEEeCCCCCCCCcCCCC
Confidence 33333333322222 12344544 4459999999999995 46899999999862113678887
No 25
>PF00246 Peptidase_M14: Zinc carboxypeptidase This is family M14 in the peptidase classification. ; InterPro: IPR000834 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of sequences contain a diverse range of gene families, which include metallopeptidases belonging to MEROPS peptidase family M14 (carboxypeptidase A, clan MC), subfamilies M14A and M14B. The carboxypeptidase A family can be divided into two subfamilies: carboxypeptidase H (regulatory) and carboxypeptidase A (digestive) []. Members of the H family have longer C-termini than those of family A [], and carboxypeptidase M (a member of the H family) is bound to the membrane by a glycosylphosphatidylinositol anchor, unlike the majority of the M14 family, which are soluble []. The zinc ligands have been determined as two histidines and a glutamate, and the catalytic residue has been identified as a C-terminal glutamate, but these do not form the characteristic metalloprotease HEXXH motif [, ]. Members of the carboxypeptidase A family are synthesised as inactive molecules with propeptides that must be cleaved to activate the enzyme. Structural studies of carboxypeptidases A and B reveal the propeptide to exist as a globular domain, followed by an extended alpha-helix; this shields the catalytic site, without specifically binding to it, while the substrate-binding site is blocked by making specific contacts [, ]. Other examples of protein families in this entry include: Intron maturase Putative mitochondrial processing peptidase alpha subunit Superoxide dismutase [Mn] (1.15.1.1 from EC) Asparagine synthetase [glutamine-hydrolysing] 3 (6.3.5.4 from EC) Glucose-6-phosphate isomerase (5.3.1.9 from EC) ; GO: 0004181 metallocarboxypeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 3DGV_A 3OSL_C 3D4U_A 2NSM_A 1QMU_A 1H8L_A 2PJ2_A 2PJ9_A 1ZG8_A 1Z5R_A ....
Probab=100.00 E-value=1.4e-46 Score=390.73 Aligned_cols=185 Identities=32% Similarity=0.530 Sum_probs=162.9
Q ss_pred HHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccC
Q psy8322 34 MREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRG 112 (651)
Q Consensus 34 i~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~ 112 (651)
|.++|++|+++||+++++.+||+|.+||+|++++|+++. .....||.|+|+|++||+||+|++++++|++.|+.+| .
T Consensus 1 i~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~k~~v~i~~~~Hg~E~~g~~~~l~~~~~L~~~~--~ 78 (279)
T PF00246_consen 1 INAYLDALAARYPDIVRLESIGKSYEGRPIYALTIGSNSNGSDPGKPTVLIIAGIHGNEWIGSEALLYLIEELLSGY--D 78 (279)
T ss_dssp HHHHHHHHHHHSTTTEEEEEEEE-TTS-EEEEEEESSSTTTTSTTSEEEEEEE-SSTT-THHHHHHHHHHHHHHHHT--T
T ss_pred CHHHHHHHHHHCCCcEEEEEeeECCCCCeEEEEEeecccccccccccceEEEecccccccCchHHHHHHHHHhhccc--c
Confidence 689999999999999999999999999999999999863 3456899999999999999999999999999999865 7
Q ss_pred ChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCC-CCCCC---CCCCCCCCcHHHH
Q psy8322 113 DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNR-SNIPT---LVSTSQSIDPEVQ 188 (651)
Q Consensus 113 d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~-s~~p~---y~G~~~~sepEt~ 188 (651)
++.++.||++++|+|||++||||+++.+.++|.|..+|.|+.||||||||+..|...+ +..|| |+|+.|+||||++
T Consensus 79 ~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~w~~~R~n~~GvDlNRnf~~~w~~~~~~~~~~~~~y~g~~~~sepEt~ 158 (279)
T PF00246_consen 79 DPEVKELLDNVVIYIIPMVNPDGYEYGTSGDRGWRKNRSNANGVDLNRNFPYQWNEEGSSSNPCSETYRGPAPFSEPETR 158 (279)
T ss_dssp SHHHHHHHHHEEEEEES-SSHHHHHHHHHT-TTCCSTSSBTTS--GGGSSSSSTTSSSSBSSTTSTTB--SSTTTSHHHH
T ss_pred chhhhhhcccceEEEEeeecccceeeeeecccccccccccccccccccccCcccccccccCCCCCcccCCCcchhhhHHH
Confidence 8999999999999999999999999999988877778999999999999999997764 56777 9999999999999
Q ss_pred HHHHHHHhCCcEEEEEEecCceeeeecccccc
Q psy8322 189 AVIDWMNSVPFVMSLQLHGGNVVASYPYDSFY 220 (651)
Q Consensus 189 al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~ 220 (651)
||++++++.++.+++|+|+++..++|||+++.
T Consensus 159 al~~~~~~~~~~~~id~H~~~~~~~~p~~~~~ 190 (279)
T PF00246_consen 159 ALRNLIQDWNPDFFIDFHSGGNAILYPYGYSY 190 (279)
T ss_dssp HHHHHHHHTTEEEEEEEEESSSEEEESESSSS
T ss_pred HHHHHHhhcceeEEEeccccccceeeeccccc
Confidence 99999999999999999999999999999864
No 26
>cd06229 M14_Endopeptidase_I Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3.4.19.11). ENP1 is a member of the M14 family of metallocarboxypeptidases (MCPs). However it has an exceptional type of activity of hydrolyzing the gamma-D-Glu-(L)meso-diaminopimelic acid (gamma-D-Glu-Dap) bond of L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. ENP1has a different substrate specificity and cellular role than MpaA (MpaA does not belong to this group). ENP1 hydrolyzes the gamma-D-Glu-Dap bond of MurNAc-tripeptide and MurNAc-tetrapeptide, as well as the amide bond of free tripeptide and tetrapeptide . ENP1 is active on spore cortex peptidoglycan, and is produced at stage IV of sporulation in forespore and spore integuments.
Probab=100.00 E-value=4.5e-40 Score=335.98 Aligned_cols=205 Identities=22% Similarity=0.395 Sum_probs=167.1
Q ss_pred ccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccC-----ChhHHHhhcCceEEEEecc
Q psy8322 57 SVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRG-----DSNIRFLLDNTRIHLLPNL 131 (651)
Q Consensus 57 S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~-----d~~~~~ll~~~~~~iiP~~ 131 (651)
|+|||+|++++|+++ +|.|+|+|++|||||+|+++++++++.|+..| +. +..+++||++++|+|||++
T Consensus 1 S~eGR~I~~~~ig~~------~~~v~i~agiHarE~~~~~~~l~~i~~L~~~~-~~~~~~~~~~~~~lL~~~~i~ivP~~ 73 (255)
T cd06229 1 SVLGRDIYEVKLGNG------PKTVFYNASFHAREWITTLLLMKFIEEYARAY-ENNEKLGGYDLRELLENVTICFVPMV 73 (255)
T ss_pred CCCCceeeEEEEcCC------CceEEEECCccccchhhHHHHHHHHHHHHHHh-ccCccccchhHHHHHhcCeEEEEeCc
Confidence 789999999999975 38999999999999999999999999999987 33 3467999999999999999
Q ss_pred Ccccccccccccc------------cCCC-----CCCCccCcCCCCCCCcccCCCC--CCCCC---CCCCCCCCcHHHHH
Q psy8322 132 NPDGSELAVEGNC------------RSGR-----GRNNINNHDLNRQFPDYFRHNR--SNIPT---LVSTSQSIDPEVQA 189 (651)
Q Consensus 132 NPDG~~~~~~~~r------------~~~~-----~r~n~~GvDLNRnf~~~w~~~~--s~~p~---y~G~~~~sepEt~a 189 (651)
|||||++++++.+ ++++ .|.||.|||||||||+.|...+ +.+|| |+|+.|||||||+|
T Consensus 74 NPDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~GVDLNRNf~~~w~~~~~~s~~p~~~~y~G~~p~SEpEtra 153 (255)
T cd06229 74 NPDGVEIVQNGPYAIRNYYLELLVINAGSINFKEWKANARGVDLNRNFPAGWEKEKAGPKAPAPRNYKGEQPLSEPETIA 153 (255)
T ss_pred cCCchheeeecccccccchhhhHHhhcCCCcccccccCCcccccCCCCCCCCCcCCCCCCCCCccCcCCCCCCCchhHHH
Confidence 9999999987532 2222 2679999999999999998764 67888 99999999999999
Q ss_pred HHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccccccccccchhhhcccC
Q psy8322 190 VIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMN 269 (651)
Q Consensus 190 l~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dw~~ 269 (651)
|++++.++++.++|++|+++++++|||+... + ...+.+.+..+.. .-+..+.... |+++|++.||+.
T Consensus 154 l~~~~~~~~~~~~i~~Hs~g~~i~~~~~~~~--~-------~~~~~~~~~~~~~--~gy~~~~~~~--~~~~G~~~Dw~~ 220 (255)
T cd06229 154 LAELTRENRFRAVLAYHSQGEEIYWGYGGLE--P-------PESQKMAELLAEV--SGYELVDSES--KRSYGGYKDWFI 220 (255)
T ss_pred HHHHHHhCCCeEEEEecCCCCeEEecCCCCC--c-------hHHHHHHHHHhhc--cCCccccccc--cCCCCCHHHHHH
Confidence 9999999999999999999999999998532 1 1112222222211 1144443333 899999999993
Q ss_pred ---CCCeEEEEEeeCc
Q psy8322 270 ---SVPFVMSLQLHGG 282 (651)
Q Consensus 270 ---~~p~~~t~el~g~ 282 (651)
++| ++|+|++.+
T Consensus 221 ~~~gi~-s~t~El~~~ 235 (255)
T cd06229 221 QKFRRP-GFTIEIGRG 235 (255)
T ss_pred hhcCCe-EEEEEeCCC
Confidence 777 999999987
No 27
>KOG2650|consensus
Probab=100.00 E-value=5e-39 Score=340.79 Aligned_cols=233 Identities=23% Similarity=0.290 Sum_probs=187.5
Q ss_pred cccchhhhccc----CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHH
Q psy8322 258 DPEVQAVIDWM----NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGRE 333 (651)
Q Consensus 258 ~~~~g~~~dw~----~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~ 333 (651)
|-.-..+++|+ ..+|..++....|. +| |||+|.+|||+.+. +.+||+||++|||||||||+++
T Consensus 121 Y~~le~I~~~l~~l~~~~P~~v~~~~IG~----s~-------EgR~i~~lkIs~~~--~~~k~~I~id~GiHAREWIspA 187 (418)
T KOG2650|consen 121 YHSLEEIYEWLDNLAERYPDLVSLIHIGR----SY-------EGRPLKVLKISGGD--NRNKKAIFIDAGIHAREWISPA 187 (418)
T ss_pred hcCHHHHHHHHHHHHHhCCCceEEEEccc----cc-------CCceEEEEEecCCC--CCCCceEEEecchhHHhhccHH
Confidence 44455677788 48999999999998 99 99999999998863 4589999999999999999999
Q ss_pred HHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC------ceeEeeccCCCCCC----
Q psy8322 334 IILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP------PFLISLFLPFPVTK---- 403 (651)
Q Consensus 334 ~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~------~~gvdlnrnf~~~~---- 403 (651)
+++|++++|+..|++ |+.+++||+++||+|||++|||||+++++.||+|||+|++ ++||||||||++.|
T Consensus 188 ta~~~i~qLv~~y~~-~~~~~~ll~~~dwyI~Pv~NPDGYeYS~t~~R~WRKnRs~~~~~~~C~GvDlNRNfd~~W~~~~ 266 (418)
T KOG2650|consen 188 TALWFINQLVSSYGR-DPAVTKLLDKLDWYILPVVNPDGYEYSRTTDRLWRKNRSPNGCASRCIGVDLNRNFDFHWGGGK 266 (418)
T ss_pred HHHHHHHHHHhhhcc-CHHHHHHHhcCcEEEEeeecCCcceeeecccccccccCCCCCCCCeeeCCCCCCCccCcCCCCC
Confidence 999999999999988 9999999999999999999999999999999999999974 58999999998553
Q ss_pred -------------CCCCCCCChHHHHHHHHHhhc---cCCCCcC---------CCCCC---CC-----------------
Q psy8322 404 -------------NKPALTPDTDVFLHLASTYAR---LHPTMHM---------KRPCP---GN----------------- 438 (651)
Q Consensus 404 -------------~~~~~~~~~~~f~~l~~~~a~---~~~~~~~---------~~~~~---~~----------------- 438 (651)
..+.++||+.+.+.+..+... .+..+|. +..|. +.
T Consensus 267 Gas~~PCse~Y~G~~pfSEpEt~av~~fi~~~~~~i~~yislHSYsQ~llyPyg~~~~~~~~~~dl~~va~~a~~ai~~~ 346 (418)
T KOG2650|consen 267 GASSDPCSETYAGPSPFSEPETRAVRDFITSFENNIKAYISLHSYSQLLLYPYGYTNDLPEDYEDLQEVARAAADALKSV 346 (418)
T ss_pred CCCCCCCccccCCCCCCCcHHHHHHHHHHHhcCcceEEEEEecccceeEEecccccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 356778888888888776422 1112222 11111 00
Q ss_pred ccccccCcceeccceEeccCcccchhhh-ccceeEEEEEecc----cCCCCCCCcchhhhhchHHHHHHHHh
Q psy8322 439 TVLKFENGVTNGAAWYSFSGGMADYNYL-YHGCLELTLEISC----CRYPAPSEIPIHWRSNQNALISWLQQ 505 (651)
Q Consensus 439 ~~~~~~~gi~n~~~~y~~sG~~~D~~y~-~~~~~~~T~El~~----~~~p~~~~i~~~w~~nr~all~~~aq 505 (651)
.+..+..|.... ..||++|+++||+|. .+++++|||||+. |+.||+.+|.+..+|.+.++..++.+
T Consensus 347 ~gt~Y~~G~~~~-~~y~asG~S~Dway~~~gi~~~ft~ELrd~g~~GF~LP~~~I~pt~~Et~~~i~~i~~~ 417 (418)
T KOG2650|consen 347 YGTKYTVGSSAD-TLYPASGGSDDWAYDVLGIPYAFTFELRDTGRYGFLLPASQIIPTAKETWAGIKAIAEK 417 (418)
T ss_pred hCCEEEeccccc-eeeccCCchHHHhhhccCCCEEEEEEeccCCCCCccCChHHhhhhHHHHHHHHHHHHhh
Confidence 233444443322 239999999999998 7999999999982 34489999999999999988877653
No 28
>cd06237 M14_Nna1_like_3 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP),-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.
Probab=100.00 E-value=7.1e-37 Score=308.14 Aligned_cols=211 Identities=18% Similarity=0.278 Sum_probs=171.5
Q ss_pred CCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322 27 NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV 106 (651)
Q Consensus 27 ~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~ 106 (651)
.-.+++|+.+||++|++. +++++.+||+|+|||||++++|+++ ..||.|++.|++||+||+|+.++++|++.|+
T Consensus 6 ~~~~~~~i~~~l~~L~~~--~~v~~~~iG~S~eGR~i~~l~ig~~----~~k~~v~i~~~iH~~E~~g~~~~~~~~~~l~ 79 (244)
T cd06237 6 ELIDNQDVKDWVDSLIKQ--PFVELELLGLSTQGRPLKALERGNP----DSKEWIVVISRQHPPEVTGALAMKAFIETLL 79 (244)
T ss_pred eeCCHHHHHHHHHHHhcC--CCeEEEEeeEcCCCCEEEEEEecCC----CCCceEEEEcCcCCCcHHHHHHHHHHHHHHH
Confidence 346899999999999755 6799999999999999999999874 4689999999999999999999999999998
Q ss_pred HHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHH
Q psy8322 107 VEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPE 186 (651)
Q Consensus 107 ~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepE 186 (651)
. .++.++.+|++++|+|||++||||+++.. +|.|++||||||||+ +++|||
T Consensus 80 ~----~~~~~~~ll~~~~i~ivP~~NPDG~~~~~--------wR~N~~GvDLNRnw~-----------------~~sepE 130 (244)
T cd06237 80 S----DSELAKKFRAKYNVLLVPNMNPDGVDLGH--------WRHNANGIDLNRDWS-----------------NFNQPE 130 (244)
T ss_pred h----CCHHHHHHHHhCEEEEEEeeCcchhhcCC--------ccCCCCCcCCCCCCC-----------------CCCCHH
Confidence 6 34567999999999999999999999753 589999999999996 689999
Q ss_pred HHHHHHHHHhC-----CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhccc--CCccccccccccc
Q psy8322 187 VQAVIDWMNSV-----PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSN--IPTLVSTSQSIDP 259 (651)
Q Consensus 187 t~al~~~~~~~-----~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 259 (651)
|+++.+++.+. ++.+++|+|++++.++|||++...... ..+. .+......+. -+.... +...++
T Consensus 131 t~a~~~~~~~~~~~~~~~~~~id~Hs~~~~i~~~~~~~~~~~~-----p~~~---~~~~~~l~~~~~~Y~~~~-~~~~~~ 201 (244)
T cd06237 131 TRAIRDYLVRLVKEGGKIVFALDFHSTWHDVFYTMPEDYKLQF-----PGFV---ADWLKELDKRILDYKVNN-RSGSSP 201 (244)
T ss_pred HHHHHHHHHHHhccCCCEEEEEEeccCCcceEecCCCCCCccc-----chHH---HHHHHHhcCcCCCceecc-ccCccc
Confidence 99999999864 799999999999999999987543310 1111 1111111112 233332 233458
Q ss_pred cchhhhccc---CCCCeEEEEEeeCc
Q psy8322 260 EVQAVIDWM---NSVPFVMSLQLHGG 282 (651)
Q Consensus 260 ~~g~~~dw~---~~~p~~~t~el~g~ 282 (651)
++|++.||+ .++| .+|+|++++
T Consensus 202 ~~g~~~Dw~~~~~~~~-~~T~E~g~~ 226 (244)
T cd06237 202 DRGVSKQYFADEHGAH-AITYEVGDN 226 (244)
T ss_pred CCCcHHHHHHHhCCCc-EEEEecCCC
Confidence 999999999 3788 999999876
No 29
>cd03871 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients.
Probab=100.00 E-value=6.8e-38 Score=324.48 Aligned_cols=221 Identities=18% Similarity=0.177 Sum_probs=177.9
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR 348 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~ 348 (651)
+.+|..++....|. +| |||+|++|+|+++ ...||+|+++|++|||||+|++++++++++||++|++
T Consensus 21 ~~~p~~v~~~~IG~----S~-------eGR~i~~l~i~~~---~~~kp~v~i~~giHarE~i~~~~~l~~i~~l~~~y~~ 86 (300)
T cd03871 21 SENPDLISRSQIGT----TF-------EGRPIYLLKVGKP---GVNKPAIFMDCGFHAREWISPAFCQWFVREAVRTYGR 86 (300)
T ss_pred HHCCCceEEEEeee----CC-------CCCeeEEEEEccC---CCCCCeEEEeccccccccccHHHHHHHHHHHHHHccC
Confidence 47788888888887 88 9999999999875 3468999999999999999999999999999999977
Q ss_pred CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC-----ceeEeeccCCCCCC----------------CCCC
Q psy8322 349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP-----PFLISLFLPFPVTK----------------NKPA 407 (651)
Q Consensus 349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~-----~~gvdlnrnf~~~~----------------~~~~ 407 (651)
|+.+++||++++|+|||++||||++++++.||+|||+|.+ +.|||||||||+.| ..+.
T Consensus 87 -d~~~~~lL~~~~~~ivP~~NPDG~~~s~~~~r~wrknr~~~~~~~c~GVDLNRNf~~~w~~~g~s~~pc~~~Y~G~~p~ 165 (300)
T cd03871 87 -EAIMTELLDKLDFYVLPVLNIDGYIYTWTKNRMWRKTRSTNAGSSCIGTDPNRNFNAGWCTVGASRNPCDETYCGSAPE 165 (300)
T ss_pred -CHHHHHHHHcCeEEEEEeecCCcCeeeeccCHHHHHhcCCCCCCCccccccCcCCCCccCCCCCCCCCCCCCcCCCCCC
Confidence 8999999999999999999999999999999999999875 38999999999665 3456
Q ss_pred CCCChHHHHHHHHHhhc---cCCCCcCC---------CCCC--CC------------------ccccccCcceeccceEe
Q psy8322 408 LTPDTDVFLHLASTYAR---LHPTMHMK---------RPCP--GN------------------TVLKFENGVTNGAAWYS 455 (651)
Q Consensus 408 ~~~~~~~f~~l~~~~a~---~~~~~~~~---------~~~~--~~------------------~~~~~~~gi~n~~~~y~ 455 (651)
++||++++..+..+... ....+|.. ..|. .+ ....+..|. .+..||+
T Consensus 166 SEpEt~Al~~~~~~~~~~~~~~l~~HSyg~~i~~Py~~~~~~~~~~~~~~~la~~~~~ai~~~~g~~y~~g~-~~~~~Y~ 244 (300)
T cd03871 166 SEKETKALADFIRNNLSSIKAYLTIHSYSQMLLYPYSYTYKLPENHAELNSVAKGAVKELASLYGTKYTYGP-GATTIYP 244 (300)
T ss_pred CCHHHHHHHHHHHhcCcceeEEEEeccCccEEEecCcCCCCCCCCHHHHHHHHHHHHHHHHHhhCCCCcCCc-ccccccc
Confidence 78899999988776421 11122220 0010 00 011122222 2457899
Q ss_pred ccCcccchhhhccceeEEEEEeccc---CC-CCCCCcchhhhhchHHHHHHHHh
Q psy8322 456 FSGGMADYNYLYHGCLELTLEISCC---RY-PAPSEIPIHWRSNQNALISWLQQ 505 (651)
Q Consensus 456 ~sG~~~D~~y~~~~~~~~T~El~~~---~~-p~~~~i~~~w~~nr~all~~~aq 505 (651)
++|+++||+|..+++++|||||+|. +| ||.++|.++++|.+..+..++..
T Consensus 245 a~G~s~Dw~y~~~~~~s~t~El~~~g~~gf~lp~~~I~~~~~E~~~~i~~~~~~ 298 (300)
T cd03871 245 AAGGSDDWAYDQGIKYSFTFELRDKGRYGFLLPESQIKPTCEETMLAVKYIANY 298 (300)
T ss_pred CCCCHHHHHhcCCCcEEEEEEeCCCCCCCCCCCHHHCccccHHHHHHHHHHHHh
Confidence 9999999999999999999999873 34 78999999999999998887654
No 30
>cd06246 M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (CPB2, also known as plasma carboxypeptidase B, carboxypeptidase U, and CPU), belongs to the carboxpeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPB2 enzyme displays B-like activity; it only cleaves the basic residues lysine or arginine. It is produced and secreted by the liver as the inactive precursor, procarboxypeptidase U or PCPB2, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). It circulates in plasma as a zymogen bound to plasminogen, and the active enzyme, TAFIa, inhibits fibrinolysis. It is highly regulated, increased TAFI concentrations are thought to increase the risk of thrombosis and coronary artery disease by reducing fibrinolytic activity whil
Probab=100.00 E-value=1.2e-37 Score=323.21 Aligned_cols=222 Identities=18% Similarity=0.160 Sum_probs=179.7
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR 348 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~ 348 (651)
+.+|..+++...|. +| |||+|++|+|++++ +..||+||++|+||||||+|++++++++++|++.|+.
T Consensus 20 ~~~p~~v~~~~iG~----S~-------egR~I~~l~is~~~--~~~k~~v~i~~giHarE~i~~~~~l~~i~~Ll~~~~~ 86 (300)
T cd06246 20 ERHSDMLEKIHIGS----SF-------EKRPLYVLKVSGKE--QTAKNAIWIDCGIHAREWISPAFCLWFVGHATQFYGI 86 (300)
T ss_pred HHCCCcEEEEeccc----CC-------CCCeEEEEEEeCCC--CCCCCeEEEecccCccchhhHHHHHHHHHHHHHHhcC
Confidence 46888899998888 89 99999999998754 4579999999999999999999999999999999987
Q ss_pred CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC-----CceeEeeccCCCCCCC----------------CCC
Q psy8322 349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT-----PPFLISLFLPFPVTKN----------------KPA 407 (651)
Q Consensus 349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~-----~~~gvdlnrnf~~~~~----------------~~~ 407 (651)
|+.+++||++++|+|||++||||++++++++++|||+|. ++.|||||||||+.|. .+.
T Consensus 87 -d~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~r~wRknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~~~~y~G~~p~ 165 (300)
T cd06246 87 -DGQMTNLLRHMDFYIMPVMNVDGYDYTWKKNRMWRKNRSFYANSHCIGTDLNRNFDAKWCCEGASSSSCSETYCGPYPE 165 (300)
T ss_pred -CHHHHHHHHhCeEEEEEeecCCceeEEEeccceeecCCCCCCCCCccCcccccccccccCCCCCCCCCCCCCcCCCCCC
Confidence 899999999999999999999999999999999999996 4689999999996553 356
Q ss_pred CCCChHHHHHHHHHhhc---cCCCCcCCC---------CCCCC--------------------ccccccCcceeccceEe
Q psy8322 408 LTPDTDVFLHLASTYAR---LHPTMHMKR---------PCPGN--------------------TVLKFENGVTNGAAWYS 455 (651)
Q Consensus 408 ~~~~~~~f~~l~~~~a~---~~~~~~~~~---------~~~~~--------------------~~~~~~~gi~n~~~~y~ 455 (651)
++||++++..+..+... ....+|... .+... ....+..|.. ...||+
T Consensus 166 SEpEt~av~~~~~~~~~~i~~~is~Hs~g~~i~~P~~~~~~~~~~~~~~~~la~~~~~ai~~~~~~~y~~g~~-~~~~Y~ 244 (300)
T cd06246 166 SEPEVKAVASFLRRHINQIKAYISMHSYSQMILFPYSYTRSKSKDHEELSLLAKEAVRAIRRTSNNRYTHGSG-AETIYL 244 (300)
T ss_pred ccHHHHHHHHHHHhCCcceeEEEEeccCCcEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHhhCCCCeecCC-CCeeec
Confidence 78899999888876521 111223211 11100 0112222321 224799
Q ss_pred ccCcccchhhhccceeEEEEEeccc---C-CCCCCCcchhhhhchHHHHHHHHh
Q psy8322 456 FSGGMADYNYLYHGCLELTLEISCC---R-YPAPSEIPIHWRSNQNALISWLQQ 505 (651)
Q Consensus 456 ~sG~~~D~~y~~~~~~~~T~El~~~---~-~p~~~~i~~~w~~nr~all~~~aq 505 (651)
++|+++||+|..+++++|||||+|+ + .||+++|.+..+|.+.++..++.+
T Consensus 245 a~G~s~Dw~y~~~~~~s~t~El~~~g~~gF~lp~~~I~p~~~E~~~~~~~~~~~ 298 (300)
T cd06246 245 APGGSDDWAYDLGIKYSFTFELRDTGTYGFLLPESYIKPTCSEALAAVKKIAWH 298 (300)
T ss_pred cCCChhhHhhcCCCCEEEEEEecCCCCCCCCCCHHHcccccHHHHHHHHHHHHh
Confidence 9999999999999999999999875 3 489999999999999999887654
No 31
>cd06247 M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO, also known as metallocarboxypeptidase C; EC 3.4.17.) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPO has not been well characterized as yet, and little is known about it. Based on modeling studies, CPO has been suggested to have specificity for acidic residues rather than aliphatic/aromatic residues as in A-like enzymes or basic residues as in B-like enzymes. It remains to be demonstrated that CPO is functional as an MCP.
Probab=100.00 E-value=2.3e-37 Score=319.92 Aligned_cols=222 Identities=18% Similarity=0.164 Sum_probs=180.7
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR 348 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~ 348 (651)
+.+|..++++..|. +| |||+|++|+||++. +..||.||++|+||||||+|++++++++++||++|..
T Consensus 19 ~~~p~~v~l~~iG~----S~-------EgR~I~~l~i~~~~--~~~k~~i~i~~giHarEwi~~~~~l~~i~~Ll~~y~~ 85 (298)
T cd06247 19 EKYSELVSQHYLGC----TY-------ELRPMYYLKIGWPS--DKPKKIIWMDCGIHAREWISPAFCQWFVKEILQNYKT 85 (298)
T ss_pred HHCCCcEEEEeceE----Cc-------CCceEEEEEeecCC--CCCCcEEEEeccccccccccHHHHHHHHHHHHHHhcc
Confidence 47888888888888 88 99999999998753 3468999999999999999999999999999999976
Q ss_pred CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC-----CceeEeeccCCCCCCC----------------CCC
Q psy8322 349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT-----PPFLISLFLPFPVTKN----------------KPA 407 (651)
Q Consensus 349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~-----~~~gvdlnrnf~~~~~----------------~~~ 407 (651)
|+.+++||++++|+|||++|||||+++++.+|+|||+|. +++||||||||++.|. .+.
T Consensus 86 -d~~~~~ll~~~~i~ivP~~NPDGy~ys~~~~r~wRknr~~~~~~~c~GVDLNRNf~~~w~~~g~s~~p~~~~y~G~~pf 164 (298)
T cd06247 86 -DPILRKVLKNVDFYVLPVLNIDGYIYTWTTDRLWRKNRSPHNNGTCYGVDLNRNFNSQWCSIGASRNCRSNIFCGTGPE 164 (298)
T ss_pred -CHHHHHHHhcCeEEEEeeecCCcceEEecccceecccCCCCCCCCccccccccCCCCccccCCCCCCCCCCCcCCCCCC
Confidence 899999999999999999999999999999999999996 4589999999997553 357
Q ss_pred CCCChHHHHHHHHHhhcc---CCCCcCC---------CCCCCC--------------------ccccccCcceeccceEe
Q psy8322 408 LTPDTDVFLHLASTYARL---HPTMHMK---------RPCPGN--------------------TVLKFENGVTNGAAWYS 455 (651)
Q Consensus 408 ~~~~~~~f~~l~~~~a~~---~~~~~~~---------~~~~~~--------------------~~~~~~~gi~n~~~~y~ 455 (651)
++||+.+++.+..+.... ...+|.. ..|... ....|..|... ..+|+
T Consensus 165 SEpEt~ai~~~~~~~~~~i~~~l~~Hsyg~~i~~P~g~~~~~~~n~~~~~~~a~~~~~ai~~~~~~~y~~g~~~-~~~y~ 243 (298)
T cd06247 165 SEPETKAVARLIESKKSDILCYLTIHSYGQLILLPYGYTKEPSSNHEEMMLVAQKAAAALKEKHGTEYRVGSSA-LILYS 243 (298)
T ss_pred CcHHHHHHHHHHHhcCcceEEEEEeccCCCeEEeCCcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCccCCcc-ccccc
Confidence 889999999998876311 1122220 011100 11234444432 34699
Q ss_pred ccCcccchhhhccceeEEEEEecc----cCCCCCCCcchhhhhchHHHHHHHHh
Q psy8322 456 FSGGMADYNYLYHGCLELTLEISC----CRYPAPSEIPIHWRSNQNALISWLQQ 505 (651)
Q Consensus 456 ~sG~~~D~~y~~~~~~~~T~El~~----~~~p~~~~i~~~w~~nr~all~~~aq 505 (651)
++|+++||+|..+++++|||||++ ++.||+++|.+..+|++.++..++..
T Consensus 244 a~G~s~Dwa~~~~~~~s~t~El~~~g~~gF~lp~~~I~p~~~E~~~~i~~~~~~ 297 (298)
T cd06247 244 NSGSSRDWAVDIGIPFSYTFELRDNGTYGFVLPEDQIQPTCEETMTAVMSMVEY 297 (298)
T ss_pred CCCChhhhhhccCCCEEEEEEeCCCCCCCCCCChHHCcchhHHHHHHHHHHHhh
Confidence 999999999998999999999986 34499999999999999999887653
No 32
>cd06234 M14_Nna1_like_1 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP)-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.
Probab=100.00 E-value=1.7e-36 Score=307.29 Aligned_cols=224 Identities=21% Similarity=0.304 Sum_probs=176.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHH
Q psy8322 23 MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLL 102 (651)
Q Consensus 23 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~ 102 (651)
|.|-..++|+++.++|+.+++ . ..+++.+||+|+|||+|++|+|+++ ..+||.|||+|++||+|++|..++..|+
T Consensus 5 ~ay~~Pys~~~~~~~l~~~~~-~-~~v~~~~iG~S~eGR~i~~l~I~~~---~~~k~~V~i~a~iH~~E~~g~~~~~~ll 79 (263)
T cd06234 5 FAYFAPYSYERHLALIARAQG-A-PDVRLEVLGQTVQGRDIDLLTFGEP---GPGKKKLWIIARQHPGETMAEWFMEGLL 79 (263)
T ss_pred EEEeCCCCHHHHHHHHHHHhc-C-CCeEEEEEEEcCCCCeEEEEEEccC---CCCCCEEEEECCCCCCcHHHHHHHHHHH
Confidence 456678899999999999976 3 4799999999999999999999874 2478999999999999999999999999
Q ss_pred HHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCC
Q psy8322 103 EHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQS 182 (651)
Q Consensus 103 ~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~ 182 (651)
+.|+. ..|+.++++|++++|+|||++||||+++.+ .|.||.||||||||+ ++.++
T Consensus 80 ~~L~~---~~d~~~~~ll~~~~~~IvP~~NPDG~~~g~--------~R~n~~GvDLNRnw~--------------~p~~~ 134 (263)
T cd06234 80 ERLLD---PDDAVARALLEKAVFYVVPNMNPDGSARGH--------LRTNAAGANLNREWA--------------EPSAE 134 (263)
T ss_pred HHHhh---cCCHHHHHHHhcCEEEEEeeecchhhhhcC--------CccCCCCCCCCCCCC--------------CCCCC
Confidence 99998 458899999999999999999999999875 588999999999997 67899
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEEecCceeeeecccccc--CCCCCCCCchhhhhhhhHHHHhh-cccCCcccc--ccccc
Q psy8322 183 IDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFY--GESKNNINNHDLNRQFPDYFRHN-RSNIPTLVS--TSQSI 257 (651)
Q Consensus 183 sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~ 257 (651)
++||+++|+++|++.++++++|+|+++++ ||++.. ...|++ ..++ +.+.+.+..+ .+..+.+.. .+...
T Consensus 135 s~PEt~av~~~~~~~~~~~~ld~Hs~~~~---py~f~~g~~~~p~~--~~~l-~~l~~~~~~al~~~~~~f~~~~~y~~~ 208 (263)
T cd06234 135 RSPEVFAVRQRMEETGVDFFLDVHGDEAL---PYNFIAGSEGVPGW--TPRL-AALEARFKAALLRASPDFQTEHGYPKD 208 (263)
T ss_pred CCHHHHHHHHHHHhcCCeEEEEeCCCCCC---CccEeccCCCCCCc--cHHH-HHHHHHHHHHHHHhCcccccccccCCC
Confidence 99999999999999999999999999996 998873 333322 1122 2222222222 222232221 11222
Q ss_pred ---cccchhhhcccC--CCCeEEEEEeeCc
Q psy8322 258 ---DPEVQAVIDWMN--SVPFVMSLQLHGG 282 (651)
Q Consensus 258 ---~~~~g~~~dw~~--~~p~~~t~el~g~ 282 (651)
++..+.+.+|+. .-..++|+|++-+
T Consensus 209 ~~g~~~~~~a~~~~~~~~~~~s~TlEmpf~ 238 (263)
T cd06234 209 APGQANLTIATNWVAHRFDCLSMTLEMPFK 238 (263)
T ss_pred CCCchhHHHHHHHHHhhcCceEEEEEeecC
Confidence 334566678883 3378999999876
No 33
>cd03872 M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also known as CPAH; EC 3.4.17.1), belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA6 prefers large hydrophobic C-terminal amino acids as well as histidine, while peptides with a penultimate glycine or proline are very poorly cleaved. Several neuropeptides are processed by CPA6, including Met- and Leu-enkephalin, angiotensin I, and neurotensin. CPA6 converts enkephalin and neurotensin into forms known to be inactive toward their receptors, but converts inactive angiotensin I into the biologically active angiotensin II. Thus, CPA6 plays a possible role in the regulation of neuropeptides in the extracellular environment within the olfactory bulb where it is highly expresse
Probab=100.00 E-value=3.3e-37 Score=318.61 Aligned_cols=223 Identities=16% Similarity=0.152 Sum_probs=180.2
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR 348 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~ 348 (651)
+.+|..++++..|. +| |||+|++|+||++. ...||.|+++|+||||||+|++++++++++|+++|..
T Consensus 17 ~~~p~~v~l~~iG~----S~-------EGR~i~~l~i~~~~--~~~k~~i~i~~giHarEwi~~~~~~~~i~~Ll~~~~~ 83 (300)
T cd03872 17 KTHSDLVHLFSIGK----SY-------EGRSLYVLKLGKRT--RSYKKAVWIDCGIHAREWIGPAFCQWFVKEALNSYQT 83 (300)
T ss_pred HHCCCceEEEEeee----cC-------CCCceEEEEEecCC--CCCCCeEEEecccccccccCHHHHHHHHHHHHHhccC
Confidence 47888899988888 89 99999999999764 3479999999999999999999999999999999977
Q ss_pred CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC-----ceeEeeccCCCCCC----------------CCCC
Q psy8322 349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP-----PFLISLFLPFPVTK----------------NKPA 407 (651)
Q Consensus 349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~-----~~gvdlnrnf~~~~----------------~~~~ 407 (651)
|+.+++||++++|+|||++|||||++++++||+|||+|.+ ++||||||||++.| ..+.
T Consensus 84 -d~~~~~lL~~~~~~ivP~vNPDGy~ys~~~~r~wrknR~~~~~~~c~GVDLNRNf~~~w~~~g~s~~Pcs~~Y~G~~pf 162 (300)
T cd03872 84 -DPAMKKMLNQLYFYVMPVFNVDGYHYSWTNDRFWRKTRSKNSRYQCRGVDANRNWKVKWCDEGASLHPCDDTYCGPFPE 162 (300)
T ss_pred -ChHHHHHHhhCeEEEEeeecCCcceeeeccchhhhccCCCCCCCCccccccccccCcccCCCCCCCCCCCCCCCCCCCC
Confidence 8999999999999999999999999999999999999875 59999999999654 3457
Q ss_pred CCCChHHHHHHHHHhhc---cCCCCcC---------CCCCCCC--------------------ccccccCcceeccceEe
Q psy8322 408 LTPDTDVFLHLASTYAR---LHPTMHM---------KRPCPGN--------------------TVLKFENGVTNGAAWYS 455 (651)
Q Consensus 408 ~~~~~~~f~~l~~~~a~---~~~~~~~---------~~~~~~~--------------------~~~~~~~gi~n~~~~y~ 455 (651)
++||++++..+..+... ....+|. +..|... ....|..|... ..+|+
T Consensus 163 SEpEt~al~~~~~~~~~~i~~~ls~Hsyg~~i~~P~g~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~Y~~g~~~-~~lY~ 241 (300)
T cd03872 163 SEPEVKAVAQFLRKHRKHVRAYLSFHAYAQMLLYPYSYKYATIPNFGCVESAAYNAVNALQSAYGVRYRYGPAS-STLYV 241 (300)
T ss_pred CcHHHHHHHHHHHhCCccceEEEEEccCCcEEEecCCCcCCCCCChHHHHHHHHHHHHHHHHhhCCCCcccCcc-cceec
Confidence 88999999888876521 1112222 0111100 11223333322 13599
Q ss_pred ccCcccchhhhccceeEEEEEeccc----CCCCCCCcchhhhhchHHHHHHHHhh
Q psy8322 456 FSGGMADYNYLYHGCLELTLEISCC----RYPAPSEIPIHWRSNQNALISWLQQV 506 (651)
Q Consensus 456 ~sG~~~D~~y~~~~~~~~T~El~~~----~~p~~~~i~~~w~~nr~all~~~aqa 506 (651)
++|++.||+|..+++++||+||+.. +.||+++|.+..+|+++++..++.++
T Consensus 242 a~G~s~Dw~y~~~i~~s~t~EL~~~g~~gF~lp~~~I~p~~~E~~~~i~~~~~~~ 296 (300)
T cd03872 242 SSGSSMDWAYKNGIPYAFAFELRDTGYYGFLLPEGLIKPTCTETMLAVKNITMHL 296 (300)
T ss_pred CCCCHHHHhhcCCCcEEEEEEeCCCCCCCCcCCHHHCCcccHHHHHHHHHHHHHH
Confidence 9999999999889999999999853 34899999999999999999887654
No 34
>cd03870 M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA enzymes generally favor hydrophobic residues. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase A (PCPA) is produced by the exocrine pancreas and stored as a stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. This subfamily includes CPA1, CPA2 and CPA4 forms. Within these A forms, there are slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 p
Probab=100.00 E-value=6.6e-37 Score=317.60 Aligned_cols=222 Identities=18% Similarity=0.175 Sum_probs=179.6
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR 348 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~ 348 (651)
+.+|..++++..|. ++ |||+|++|+||+++ ..||+|+++|++|||||+|++++++++++|+.+|.+
T Consensus 21 ~~~p~~v~~~~iG~----S~-------eGR~I~~l~is~~~---~~kp~v~i~~giHarE~i~~~~~l~~~~~L~~~~~~ 86 (301)
T cd03870 21 AEHPNLVSKLQIGR----SY-------EGRPIYVLKFSTGG---SNRPAIWIDAGIHSREWITQATGVWFAKKITEDYGQ 86 (301)
T ss_pred HHCCCceEEEeccc----CC-------CCCeEEEEEEecCC---CCCceEEEeccccccchhhHHHHHHHHHHHHHhccc
Confidence 46788888888887 88 99999999999764 378999999999999999999999999999999977
Q ss_pred CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC-----CceeEeeccCCCCCCC----------------CCC
Q psy8322 349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT-----PPFLISLFLPFPVTKN----------------KPA 407 (651)
Q Consensus 349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~-----~~~gvdlnrnf~~~~~----------------~~~ 407 (651)
|+.+++||++++|+|||++||||++++++.+|+|||+|. +++|||||||||+.|+ .+.
T Consensus 87 -d~~~~~lLd~~~i~ivP~~NPDG~~~s~~~~r~wrknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~~~~Y~G~~pf 165 (301)
T cd03870 87 -DPSFTAILDSMDIFLEIVTNPDGYVFTHSQNRLWRKTRSVTSGSLCVGVDPNRNWDAGFGGAGASSNPCSETYHGPYAN 165 (301)
T ss_pred -CHHHHHHHHhCcEEEEeeecCchhhheecccceeecCCCCCCCCCccccccccCCCcccCcCCCCCCCCccccCCCCCC
Confidence 899999999999999999999999999999999999997 4699999999997653 346
Q ss_pred CCCChHHHHHHHHHhh--ccCCCCcCC---------CCCCCC--------------------ccccccCcceeccceEec
Q psy8322 408 LTPDTDVFLHLASTYA--RLHPTMHMK---------RPCPGN--------------------TVLKFENGVTNGAAWYSF 456 (651)
Q Consensus 408 ~~~~~~~f~~l~~~~a--~~~~~~~~~---------~~~~~~--------------------~~~~~~~gi~n~~~~y~~ 456 (651)
++||+++++.+..... .....+|.. ..|... ....+..|... ..||++
T Consensus 166 SEpEt~av~~~~~~~~~~~~~l~lHS~g~~i~yP~~~~~~~~~~~~~~~~la~~~~~ai~~~~g~~y~~g~~~-~~~y~a 244 (301)
T cd03870 166 SEVEVKSIVDFVKSHGNFKAFISIHSYSQLLLYPYGYTTQSIPDKTELNQVAKSAVAALKSLYGTSYKYGSII-TTIYQA 244 (301)
T ss_pred ccHHHHHHHHHHhhCCCeEEEEEeccCCceEEecCcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCcccccccc-ceeecC
Confidence 7899999998876531 111122221 011100 11223333332 357999
Q ss_pred cCcccchhhhccceeEEEEEeccc----CCCCCCCcchhhhhchHHHHHHHHhh
Q psy8322 457 SGGMADYNYLYHGCLELTLEISCC----RYPAPSEIPIHWRSNQNALISWLQQV 506 (651)
Q Consensus 457 sG~~~D~~y~~~~~~~~T~El~~~----~~p~~~~i~~~w~~nr~all~~~aqa 506 (651)
+|+++||+|..+++++|||||+++ ++||+++|.+..+|.+..+..++.+.
T Consensus 245 ~G~s~Dw~y~~~~~~s~t~El~~~g~~gF~lP~~~i~p~~~E~~~~i~~~~~~~ 298 (301)
T cd03870 245 SGGSIDWSYNQGIKYSFTFELRDTGRYGFLLPASQIIPTAQETWLGLLTIMEHT 298 (301)
T ss_pred CCChhhhhhcCCCcEEEEEEeCCCCCCCCCCChHHCchhhHHHHHHHHHHHHHH
Confidence 999999999999999999999874 34899999999999999998887653
No 35
>cd06908 M14_AGBL4_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-4, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL4 and the mouse cytosolic carboxypeptidase (CCP)-6. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal
Probab=100.00 E-value=3.7e-36 Score=304.10 Aligned_cols=213 Identities=18% Similarity=0.270 Sum_probs=169.0
Q ss_pred HHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC--CCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChh
Q psy8322 38 LENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP--VHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSN 115 (651)
Q Consensus 38 l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~--~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~ 115 (651)
|++|+++||+++++++||+|+|||+|++|+|++++ ....+||.|||.|++||+||+|++++++|+++|+. .|+.
T Consensus 1 l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~It~~~~~~~~~~k~~I~i~ariHp~E~~~s~~~~~li~~L~~----~~~~ 76 (261)
T cd06908 1 LDALEKRSLDYFRREQLGQSVQKRRLDLLTIDSPDNLREDSEKKVIFITARVHPGESPSSYVCQGLIDFLVS----NHPI 76 (261)
T ss_pred ChHHHhhCCCcEEEEEeEEcCCCCeeEEEEEcCCCccccCCCCcEEEEECCcCCCChHHHHHHHHHHHHHhh----CCHH
Confidence 56889999999999999999999999999999864 12357999999999999999999999999999996 3899
Q ss_pred HHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHH
Q psy8322 116 IRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMN 195 (651)
Q Consensus 116 ~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~ 195 (651)
++.|+++++|+||||+||||+++.. .|.+|.|+||||||+ ++.|+++||+++++++++
T Consensus 77 ~~~L~~~~~~~IvP~~NPDGv~~gn--------~R~~~~G~DLNR~w~--------------~p~~~~~PEv~av~~~i~ 134 (261)
T cd06908 77 AKVLREHLVFKIVPMLNPDGVFLGN--------YRCSLMGHDLNRHWH--------------DPSPWAHPTLHAVKNLLK 134 (261)
T ss_pred HHHHHHhCcEEEEeeecCcceeecC--------CcCcCcCcCCCCCCC--------------CCCcccChHHHHHHHHHH
Confidence 9999999999999999999999875 589999999999997 678999999999999998
Q ss_pred hC------CcEEEEEEecCceee-eeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCcccc--ccccccccchhhhc
Q psy8322 196 SV------PFVMSLQLHGGNVVA-SYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVS--TSQSIDPEVQAVID 266 (651)
Q Consensus 196 ~~------~~~~~i~~H~~~~~~-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~d 266 (651)
++ ++.+++|+||+++++ +||||++...++ +......++.+.+........... ....-.+.++.+.=
T Consensus 135 ~~~~~~~~~i~~~lD~H~hs~~~~~F~yG~~~~~~~----~~~~~~~fp~~l~~~~~~F~~~~~~f~~~~~k~gtar~~~ 210 (261)
T cd06908 135 ELDNDSTTQLDFYIDLHAHSSLMNCFIYGNTYDDVY----RYERQLVFPKLLAQNAEDFSMEHTMFNRDAVKAGTGRRFL 210 (261)
T ss_pred HhhhccccCeeEEEEeeccccccceeeccccCCccc----cHHHHHHHHHHHHHhCHHhcccCCcccCCCCCCChHHHHH
Confidence 74 699999999999998 899999865432 344445666666555432211000 01122233333322
Q ss_pred cc-CC-CCeEEEEEee
Q psy8322 267 WM-NS-VPFVMSLQLH 280 (651)
Q Consensus 267 w~-~~-~p~~~t~el~ 280 (651)
|- .+ ++.++|+|..
T Consensus 211 ~~~~~~~~~s~TlE~s 226 (261)
T cd06908 211 GSLLSDNVNCYTLEVS 226 (261)
T ss_pred HHHhCCCceEEEEeec
Confidence 22 25 4788888875
No 36
>cd06248 M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/B-like subfamily: This is one of two main M14 carboxypeptidase subfamilies, defined by sequence and structural homology, the other being N/E. Carboxypeptidases (CPs) hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Majority of the proteins in this subfamily have not been characterized as yet. The A/B enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; the proenzymes are called procarboxypeptidases. These enzymes exhibit distinct substrate specificity pattern; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5,
Probab=100.00 E-value=2.5e-36 Score=314.93 Aligned_cols=223 Identities=21% Similarity=0.258 Sum_probs=178.8
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR 348 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~ 348 (651)
+.+|..++++..|. ++ |||+|++|+|+++......||+|+++|+||||||+|++++++++++|+++|..
T Consensus 19 ~~~p~~v~~~~iG~----S~-------eGR~i~~l~I~~~~~~~~~k~~v~i~~giHarE~~~~~~~l~~~~~L~~~~~~ 87 (304)
T cd06248 19 AAFPNNSELFTIGK----SY-------EGRTILGLHIWGSGGEKGSKPAIVIHGTVHAREWISTMTVEYLAYQLLTGYGS 87 (304)
T ss_pred HHCCCceEEeceEE----CC-------CCCeEEEEEEecCCCCCCCCcEEEEECCcCcCccccHHHHHHHHHHHHHhhcc
Confidence 36777788888887 88 99999999999765434679999999999999999999999999999999987
Q ss_pred CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC-----ceeEeeccCCCCCCC----------------CCC
Q psy8322 349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP-----PFLISLFLPFPVTKN----------------KPA 407 (651)
Q Consensus 349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~-----~~gvdlnrnf~~~~~----------------~~~ 407 (651)
|+.++.||++++|+|||++||||+++++.+||+|||+|.+ +.|||||||||+.|. .+.
T Consensus 88 -d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~wRknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~s~~Y~G~~~~ 166 (304)
T cd06248 88 -DATVTALLDKFDFYIIPVVNPDGFVYTQTSDRLWRKNRQPTSGSSCVGTDLNRNWPYKWDGGGSSTNPCSETYRGESPG 166 (304)
T ss_pred -CHHHHHHHHhCcEEEEeeecCchhhhhccchhhhhhcCCCCCCCCceeecCCCCCCCcccCCCCCCCCCCCCcCCCCCC
Confidence 8999999999999999999999999999999999999963 589999999997664 357
Q ss_pred CCCChHHHHHHHHHhhc-----cCCCCcCC---------CCC---CCC------------------ccccccCcceeccc
Q psy8322 408 LTPDTDVFLHLASTYAR-----LHPTMHMK---------RPC---PGN------------------TVLKFENGVTNGAA 452 (651)
Q Consensus 408 ~~~~~~~f~~l~~~~a~-----~~~~~~~~---------~~~---~~~------------------~~~~~~~gi~n~~~ 452 (651)
++||+++++.+..++.. ....+|.. ..+ +.. ....+..|.. ...
T Consensus 167 sEpEt~av~~~~~~~~~~~~~~~~l~~Hs~~~~i~~P~~~~~~~~~~d~~~~~~la~~~a~ai~~~~g~~y~~g~~-~~~ 245 (304)
T cd06248 167 DAPEAKALAAFLNKLAEGQGIVGYIDWHSYSQLILYPYGYSCDAVPPNLENLEELAAGLAKAIRAVSGTTYTVGPA-CNT 245 (304)
T ss_pred ccHHHHHHHHHHHhccccCceEEEEEeccCcceEEecCcCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCccccc-ccc
Confidence 89999999988876421 11112210 011 111 0112333332 246
Q ss_pred eEeccCcccchhhhccc-eeEEEEEecc----cCCCCCCCcchhhhhchHHHHHHHH
Q psy8322 453 WYSFSGGMADYNYLYHG-CLELTLEISC----CRYPAPSEIPIHWRSNQNALISWLQ 504 (651)
Q Consensus 453 ~y~~sG~~~D~~y~~~~-~~~~T~El~~----~~~p~~~~i~~~w~~nr~all~~~a 504 (651)
||+++|+++||+|...+ +++|||||++ ++.||+++|.+..+|++..+..++.
T Consensus 246 ~y~~~G~~~D~~y~~~gi~~~~t~El~~~~~~gf~~p~~~i~p~~~e~~~~~~~~~~ 302 (304)
T cd06248 246 LYQTTGSSVDWVYHVAGAAWSYQLELRDTGTYGFVLPAKQIIPTGEETWAGIKYLLK 302 (304)
T ss_pred cccCCCCcchhhhccCCCcEEEEEEeCCCCCCCCCCCHHHCcchhHHHHHHHHHHHh
Confidence 89999999999998755 9999999986 3448999999999999999988764
No 37
>cd03862 Peptidase_M14-like_7 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=2.1e-35 Score=301.33 Aligned_cols=205 Identities=22% Similarity=0.350 Sum_probs=163.5
Q ss_pred CCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccc
Q psy8322 59 LGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL 138 (651)
Q Consensus 59 egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~ 138 (651)
...||++|+|++. ...||.|+|+||+||+||+|+++++++++.|+..| +.|+.++++|++++|+|||++||||+.+
T Consensus 8 ~~~pi~~v~ig~~---~~~~p~v~i~~giHg~E~ig~~~~l~~l~~L~~~~-~~d~~~~~ll~~~~i~ivP~vNPdG~~~ 83 (273)
T cd03862 8 LRFPIYALELGSP---DPKAPVLGLVGGVHGLERIGTQVLLAFLESLLERL-RWDKLLQELLEKVRLVFLPLVNPVGMAL 83 (273)
T ss_pred CcceeEEEEecCC---CCCCCEEEEEcCcCCCcHHHHHHHHHHHHHHHHhc-cccHHHHHHHhCCeEEEEeccCcCHHHh
Confidence 4569999999874 25689999999999999999999999999999988 7789999999999999999999999875
Q ss_pred cccccccCCCCCCCccCcCCCCCCCcccCC------CC-CCCCC---CCCCC-CCCcHHHHHHHHHHHhC----CcEEEE
Q psy8322 139 AVEGNCRSGRGRNNINNHDLNRQFPDYFRH------NR-SNIPT---LVSTS-QSIDPEVQAVIDWMNSV----PFVMSL 203 (651)
Q Consensus 139 ~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~------~~-s~~p~---y~G~~-~~sepEt~al~~~~~~~----~~~~~i 203 (651)
. .|.|++|||||||||..|.. .+ +.+|| |+|+. |+||||++||+++++++ ++.+++
T Consensus 84 ~---------~R~n~~GVDLNRNfp~~~~~~~~~~~~G~~~~p~~~~Y~G~~~~~sEpEt~al~~~~~~~~~~~~~~~~l 154 (273)
T cd03862 84 K---------TRSNGNGVDLMRNAPVDAEDKPPFLVGGQRLSPRLPWYRGKNGAGMELEAQALCRFVRELLFESPFSIAL 154 (273)
T ss_pred c---------ccCCCCCcccCCCCCCCccccccccccCccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCeEEEE
Confidence 4 37899999999999999863 22 45677 99987 99999999999999985 689999
Q ss_pred EEecC---ceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhc-ccCCccccccccccccchhhhcccC---------C
Q psy8322 204 QLHGG---NVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNR-SNIPTLVSTSQSIDPEVQAVIDWMN---------S 270 (651)
Q Consensus 204 ~~H~~---~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~dw~~---------~ 270 (651)
|+|+| +++++|||++++...++ ..+++ .+.+.+.... ...+.+++.+. +|+++|++.||+. +
T Consensus 155 d~HSg~G~~~~i~~Pyg~~~~~~~~---~~~~~-~l~~~~~~~~~~~~Y~~g~~s~-~Y~a~G~~~D~~y~~~~~~~~~~ 229 (273)
T cd03862 155 DCHSGFGLVDRIWFPYAYTKEPIPH---LAEIY-ALKELLERTYPNHVYRFEPQSR-HYLTHGDLWDYLYDQHQKQQPNG 229 (273)
T ss_pred EECCCCCccCEEEcCCcCCCCCCCC---HHHHH-HHHHHHHHhCCCCceEECCcce-eEECCCCHHHHHHhhcCcccccc
Confidence 99995 48999999998766432 22332 2333333221 12455555555 7999999999994 2
Q ss_pred CCeEEEEEeeC
Q psy8322 271 VPFVMSLQLHG 281 (651)
Q Consensus 271 ~p~~~t~el~g 281 (651)
....+|+|+.-
T Consensus 230 ~~l~~TlE~Gt 240 (273)
T cd03862 230 RFLPLTLEMGS 240 (273)
T ss_pred cceeEEEEeec
Confidence 24577888753
No 38
>cd03856 M14_Nna1_like Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subfamily includes the human AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. M
Probab=100.00 E-value=3.2e-35 Score=300.59 Aligned_cols=215 Identities=19% Similarity=0.255 Sum_probs=175.0
Q ss_pred CCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322 27 NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV 106 (651)
Q Consensus 27 ~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~ 106 (651)
.-.+|.+....++.++ |..+++.+||+|.+||+|++++++.. .+||.|||.|++||+||+|+++++++++.|+
T Consensus 9 ~~~~y~~~~~l~~sl~---~~~v~l~~IG~s~egr~i~~~~~~~~----~~k~~i~i~a~iH~~E~~~~~~~~~li~~Ll 81 (269)
T cd03856 9 ANQIYDRRLALCESLQ---GNSCDLLTITSPPEGNDIKYEHLCSF----ANKKYIFLIARVHPGETNASWVMKGFLEFLL 81 (269)
T ss_pred CCcCHHHHHHHHHHhc---CCceeEEEeccCCCCccccceeccCC----CCCcEEEEEcCcCCCchHHHHHHHHHHHHHH
Confidence 4568899999998886 77899999999999999999998753 5799999999999999999999999999999
Q ss_pred HHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHH
Q psy8322 107 VEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPE 186 (651)
Q Consensus 107 ~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepE 186 (651)
. .++.++.+|++++|+|||++||||+++.+ +|.||.|+||||||+ +|.++++||
T Consensus 82 ~----~~~~~~~ll~~~~~~ivP~~NPDG~~~g~--------~R~n~~G~DLNR~~~--------------~p~~~~~pE 135 (269)
T cd03856 82 S----DNPTAQSLRESFVFKIVPMLNPDGVIRGN--------YRCSLSGVDLNRQWQ--------------NPSPDLHPE 135 (269)
T ss_pred h----CCHHHHHHHhcCeEEEEeeeCCccccccC--------CcCCCCCCCcCCCCC--------------CCCCCCCCC
Confidence 6 35669999999999999999999999764 589999999999997 688999999
Q ss_pred HHHHHHHHHhC-----CcEEEEEEecCc---eeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccC-------Cccc
Q psy8322 187 VQAVIDWMNSV-----PFVMSLQLHGGN---VVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNI-------PTLV 251 (651)
Q Consensus 187 t~al~~~~~~~-----~~~~~i~~H~~~---~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 251 (651)
++++++++.++ ++.+++|+|+++ ++++ ||++...++ +......++++..... ++ +...
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~idlH~~~~~~~~f~--yG~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~f~~~ 208 (269)
T cd03856 136 IYLVKGLMLYLAAGKRGVLFYCDFHGHSRKKNVFM--YGCSFKDEV----WDQGYRIIPKMLSQNA-PLFCMFGCSFKVE 208 (269)
T ss_pred HHHHHHHHHHHHhccCCceEEEEecCCCccCceEe--ecCCCchhh----hhhHHHHHHHHHHhhC-hhhhhcCCCcCCC
Confidence 99999999987 899999999999 6666 666543322 1222233444322121 22 2222
Q ss_pred cccccccccchhhhccc---CCCCeEEEEEeeCc
Q psy8322 252 STSQSIDPEVQAVIDWM---NSVPFVMSLQLHGG 282 (651)
Q Consensus 252 ~~~~~~~~~~g~~~dw~---~~~p~~~t~el~g~ 282 (651)
+... +|+++|++.+|+ .++|+++|+|+++.
T Consensus 209 ~~~~-~~~~~gtsr~~~~~~~~i~~syTlE~~~~ 241 (269)
T cd03856 209 KSKA-SDPDRGTGRVVVAKQIKVQHSYTMEVTFN 241 (269)
T ss_pred cCCc-ccCCCChHHHHHHHhcCCcEEEEEecCCC
Confidence 2233 789999999998 48999999999987
No 39
>cd06228 Peptidase_M14-like_3 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=1.6e-34 Score=299.83 Aligned_cols=206 Identities=17% Similarity=0.239 Sum_probs=159.2
Q ss_pred EeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc---------
Q psy8322 278 QLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR--------- 348 (651)
Q Consensus 278 el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~--------- 348 (651)
|+++. +| |||+|++|+|+.+. ...||+|+++|+||||||++++++++++++||..|..
T Consensus 4 ~~~~~----S~-------EgR~I~~l~I~~~~--~~~kp~V~i~ggiHAREwis~~~~l~~i~~Ll~~y~~~~~~~yg~~ 70 (332)
T cd06228 4 ELPHK----TY-------EGRTPHGAKIGAGT--LTSRYGALFIGGVHARERGSPDNLIYFVSDLLNARKAGRGIKYGGR 70 (332)
T ss_pred CCCCC----CC-------CCCeeEEEEEeCCC--CCCCCEEEEEccccccchhhHHHHHHHHHHHHHhhhcccccccccc
Confidence 55665 77 99999999999864 3579999999999999999999999999999998752
Q ss_pred --CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC--------CceeEeeccCCCCCCC--------------
Q psy8322 349 --GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT--------PPFLISLFLPFPVTKN-------------- 404 (651)
Q Consensus 349 --~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~--------~~~gvdlnrnf~~~~~-------------- 404 (651)
.|+++++||+ ++|+|||++||||+++++..+|+|||+|. +++||||||||++.|.
T Consensus 71 ~~~d~~v~~lL~-~~i~IvP~vNPDGy~~s~~~~r~WRKNr~~~~~~~~~~c~GVDLNRNf~~~W~~~~~~~~~~~~~g~ 149 (332)
T cd06228 71 TYTAADVKAILD-AGIVVFPLVNPDGRAHDQTANSCWRKNRNPASAGPNPSSVGVDINRNFDFLWDFQKYFDPGASRSVA 149 (332)
T ss_pred ccccHHHHHHHh-CeEEEEEeecCcchhheeccchhhhccCCCCcccccCcccccccCCCCCCCcCcccccccccccCCC
Confidence 2788999999 99999999999999999999999999986 5789999999987664
Q ss_pred ------------CCCCCCChHHHHHHHHHhh--ccCCCCcC---------CCCCC-------------------------
Q psy8322 405 ------------KPALTPDTDVFLHLASTYA--RLHPTMHM---------KRPCP------------------------- 436 (651)
Q Consensus 405 ------------~~~~~~~~~~f~~l~~~~a--~~~~~~~~---------~~~~~------------------------- 436 (651)
.+.++||+++++.+...+. ..+..+|. +..|.
T Consensus 150 S~~Pcse~Y~G~~pfSEPET~av~~~~~~~~~~~~yls~HSygq~il~P~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (332)
T cd06228 150 STDPASETFHGTAAFSEPETRNVVWVMDTFKNIRWFVDLHSYGGDVLYSWGDDENQSTNPAMNFMNPAYDGKRGIVAAPD 229 (332)
T ss_pred CCCCCccccCCCCCCccHHHHHHHHHHhccCCeEEEEEeccCCceEEecccCCccccccccccccccccccccccccccc
Confidence 4578889999988877642 01111111 01110
Q ss_pred ---------CC------------------ccccccCcceeccceEeccCcccchhhhc-------cceeEEEEEecc---
Q psy8322 437 ---------GN------------------TVLKFENGVTNGAAWYSFSGGMADYNYLY-------HGCLELTLEISC--- 479 (651)
Q Consensus 437 ---------~~------------------~~~~~~~gi~n~~~~y~~sG~~~D~~y~~-------~~~~~~T~El~~--- 479 (651)
.+ .+..|..|.. ...||++|+++||+|.. +.+++|||||+.
T Consensus 230 ~~~~~~~~~~~~~~l~~~a~~~~~ai~~~~g~~Y~~g~~--~~lY~~sG~s~D~ay~~~~~~~~~~~~~s~t~El~~~~~ 307 (332)
T cd06228 230 TRYGEYIDSDDWDAAVNLAARMGLAMAAARGRIYTVSQS--VGLYPTSGASDDYAFSRHFADAVKRKVFSYTIEFGETNS 307 (332)
T ss_pred cccccccCCCCHHHHHHHHHHHHHHHHHHhCCCceeCCc--ccccCCCCChhhhhhhccccccccCceEEEEEEeCCCCC
Confidence 00 0112233332 23599999999999974 578999999974
Q ss_pred ----cCCCCCCCcchhhhhchHHH
Q psy8322 480 ----CRYPAPSEIPIHWRSNQNAL 499 (651)
Q Consensus 480 ----~~~p~~~~i~~~w~~nr~al 499 (651)
+++||.++|..+-+|....+
T Consensus 308 ~~~~gF~~p~~~i~~~~~E~~~g~ 331 (332)
T cd06228 308 EAECPFYPTYSEYNQIIKEVAAGL 331 (332)
T ss_pred CCCcCCCCCHHHHHHHHHHHHHhh
Confidence 34588999998877766544
No 40
>cd06242 Peptidase_M14-like_1_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=100.00 E-value=2.9e-32 Score=278.67 Aligned_cols=153 Identities=24% Similarity=0.290 Sum_probs=139.7
Q ss_pred CCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCC--CCCCCCeEEEEecccCCChhHHHHHHHHHHHH
Q psy8322 28 YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPV--HQLGVPNVKIVGNIHGDEPIGREIILRLLEHL 105 (651)
Q Consensus 28 y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~--~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L 105 (651)
+.+|+||.+||++|++++|.+.++.+||+|+|||+|++++|+++.. ....||.|||.|||||+||+|+++++++++.|
T Consensus 2 ~t~y~e~~~~l~~La~~~~~i~~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~V~i~~giHg~E~~g~~a~l~ll~~L 81 (268)
T cd06242 2 PTSHEEMESFMKSLASKNDWMSYHSDIGKSEEGRSIPYVYLSTSKSSSSSSKKLRVWLQGGVHGNEPAGDEAALALLGKL 81 (268)
T ss_pred CCCHHHHHHHHHHHHHHCCCeEEEEECccccCCceeEEEEEecCCccccCCCCCEEEEECCcCCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999988899999999999999999997642 24679999999999999999999999999999
Q ss_pred HHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcH
Q psy8322 106 VVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDP 185 (651)
Q Consensus 106 ~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sep 185 (651)
+.+ +...++|++++|+|+|++||||+++.. |.||.|+||||||. ++++|
T Consensus 82 ~~~-----~~~~~lL~~~~i~ivP~~NPDG~~~~~---------R~na~g~DlNRD~~-----------------~~~~p 130 (268)
T cd06242 82 DNN-----PKWASVLEKIDIIVLPRYNPDGSAYFQ---------RTLATGYDPNRDHT-----------------KLARQ 130 (268)
T ss_pred HhC-----chHHHHHhcCeEEEEeccCcchhhhcc---------ccCCcCcccCCCCC-----------------cccCH
Confidence 973 234589999999999999999999864 88999999999996 58999
Q ss_pred HHHHHHHHHHhCCcEEEEEEecCcee
Q psy8322 186 EVQAVIDWMNSVPFVMSLQLHGGNVV 211 (651)
Q Consensus 186 Et~al~~~~~~~~~~~~i~~H~~~~~ 211 (651)
|++++++++.+++|.+++|+|.++..
T Consensus 131 Etra~~~~~~~~~P~v~iD~He~~~~ 156 (268)
T cd06242 131 QTRDIKEAFSKFNPHIAIDAHEYGAF 156 (268)
T ss_pred HHHHHHHHHHHhCCcEEEEeccCCcc
Confidence 99999999999999999999988775
No 41
>cd03860 M14_CP_A-B_like The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the
Probab=100.00 E-value=1.3e-32 Score=286.99 Aligned_cols=219 Identities=23% Similarity=0.271 Sum_probs=173.7
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR 348 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~ 348 (651)
+.+|..++++..|. ++ |||+|++|+|++++ ...||+|+++|++|||||+|++++++++++|+.++
T Consensus 16 ~~~p~~~~~~~iG~----S~-------egr~i~~l~i~~~~--~~~k~~v~i~~~~Hg~E~~g~~~~~~~~~~L~~~~-- 80 (294)
T cd03860 16 QKYPDLVTVETIGR----SY-------EGRPIKGVKISNGG--RSNKPAIFIDAGIHAREWISPATALYIINQLVESY-- 80 (294)
T ss_pred HHCCCceEEEeeee----CC-------CCCeEEEEEEecCC--CCCCcEEEEECCcCcCccccHHHHHHHHHHHHHcc--
Confidence 35666777777787 77 99999999999874 45789999999999999999999999999999987
Q ss_pred CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC-----ceeEeeccCCCCCCC----------------CCC
Q psy8322 349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP-----PFLISLFLPFPVTKN----------------KPA 407 (651)
Q Consensus 349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~-----~~gvdlnrnf~~~~~----------------~~~ 407 (651)
++.++.||++++|+|||++||||+++.+++++.|||+|.+ +.|||||||||+.|. .+.
T Consensus 81 -~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~wrknr~~~~~~~~~GvDLNRnf~~~w~~~~~~~~p~~~~y~G~~~~ 159 (294)
T cd03860 81 -DPEVTDLLDNYDWYILPVANPDGYEYTHTTDRLWRKNRSPNSGGGCVGVDLNRNFDYHWGGGGASSDPCSETYAGPSAF 159 (294)
T ss_pred -CHHHHHHHHcCeEEEEeeecCCchhhhccccchhcccCCCCCCCCceeeccCCCCCCCCccCCCCCCCCCCCccCCCCC
Confidence 4789999999999999999999999999999999999875 589999999997653 345
Q ss_pred CCCChHHHHHHHHHhh---ccCCCCcCCC-----C--CCCC----------------------ccccccCcceeccceEe
Q psy8322 408 LTPDTDVFLHLASTYA---RLHPTMHMKR-----P--CPGN----------------------TVLKFENGVTNGAAWYS 455 (651)
Q Consensus 408 ~~~~~~~f~~l~~~~a---~~~~~~~~~~-----~--~~~~----------------------~~~~~~~gi~n~~~~y~ 455 (651)
++||+++++.+..++. .....+|... + +... ....+..|.. ...||+
T Consensus 160 sepEt~al~~~~~~~~~~~~~~ld~Hs~~~~i~~P~~~~~~~~~d~~~~~~la~~~~~~~~~~~g~~Y~~g~~-~~~~y~ 238 (294)
T cd03860 160 SEPETRAVRDFLLSLRGRIKAYLSLHSYGQLILYPWGYTSELPPNYEDLREVAKAAADAIRAVYGTRYTVGSS-AETLYP 238 (294)
T ss_pred chHHHHHHHHHHHhccccEEEEEEeccCCceEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCccccc-cCcccc
Confidence 7889999999988773 1111222211 1 0000 0112222322 235899
Q ss_pred ccCcccchhhhcc-ceeEEEEEeccc----CCCCCCCcchhhhhchHHHHHHHH
Q psy8322 456 FSGGMADYNYLYH-GCLELTLEISCC----RYPAPSEIPIHWRSNQNALISWLQ 504 (651)
Q Consensus 456 ~sG~~~D~~y~~~-~~~~~T~El~~~----~~p~~~~i~~~w~~nr~all~~~a 504 (651)
++|+++||+|... .+++||+||+|+ +.||.++|.++.+|++..+..++.
T Consensus 239 ~~G~~~Dw~y~~~~~~~~~t~El~~~~~~gf~~p~~~i~~~~~e~~~~~~~~~~ 292 (294)
T cd03860 239 ASGGSDDWAYGVAGIPYSYTLELRDTGRYGFLLPASQIIPTAEETFAGIKAMAD 292 (294)
T ss_pred CCCchhhhhhccCCCcEEEEEEecCCCCCCCcCChHHchhHHHHHHHHHHHHHh
Confidence 9999999999876 568999999874 458899999999999999988764
No 42
>cd06239 Peptidase_M14-like_1_2 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.97 E-value=7.8e-32 Score=268.22 Aligned_cols=142 Identities=26% Similarity=0.405 Sum_probs=129.6
Q ss_pred HHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhh
Q psy8322 41 FTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLL 120 (651)
Q Consensus 41 l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll 120 (651)
+.+++|+.++++.||+|++||||++++|+++ ||.|++.|++||+||.|++++++|+++|+.+ .++.++.+|
T Consensus 2 ~~~~~p~~v~~~~iG~S~eGrpI~~l~ig~g------~~~vli~agiHG~E~~g~~all~ll~~L~~~---~~~~~~~ll 72 (231)
T cd06239 2 LLEKLPAKFKVEVIGKSVEGRPIYSVKFGSG------KIKILLWSQMHGNESTTTKALLDLLNFLGTS---KDQEAKKIL 72 (231)
T ss_pred hHHHCCCeeEEEEeeECCCCCeEEEEEEcCC------CcEEEEEeccCCCCHHHHHHHHHHHHHHHHC---CCHHHHHHH
Confidence 4578999999999999999999999999974 6999999999999999999999999999983 456668999
Q ss_pred cCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcE
Q psy8322 121 DNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFV 200 (651)
Q Consensus 121 ~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~~~~ 200 (651)
++++|+|||++||||+++.+ |.|+.||||||||+ +.++||+++++++++++++.
T Consensus 73 ~~~~v~iiP~lNPDG~~~~~---------R~N~~GvDLNRdf~-----------------~~s~PEtr~l~~~~~~~~pd 126 (231)
T cd06239 73 DEVTLVIIPMLNPDGAEAYT---------RVNANGVDLNRDAQ-----------------DLSQPESRLLRDVYDGFQPD 126 (231)
T ss_pred hCCEEEEEeccCccHHHHcc---------cCCCcCCcCCCCCC-----------------CCChHHHHHHHHHHHhcCCE
Confidence 99999999999999999754 88999999999997 47899999999999999999
Q ss_pred EEEEEecCceeeeeccccc
Q psy8322 201 MSLQLHGGNVVASYPYDSF 219 (651)
Q Consensus 201 ~~i~~H~~~~~~~~P~~~~ 219 (651)
+++|+|+++.+ |.++.+
T Consensus 127 ~~iDlH~~~~~--y~~~~~ 143 (231)
T cd06239 127 FCFNLHDQRTI--YGVENT 143 (231)
T ss_pred EEEEECCCCCc--cCCCCC
Confidence 99999999986 666554
No 43
>cd06229 M14_Endopeptidase_I Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3.4.19.11). ENP1 is a member of the M14 family of metallocarboxypeptidases (MCPs). However it has an exceptional type of activity of hydrolyzing the gamma-D-Glu-(L)meso-diaminopimelic acid (gamma-D-Glu-Dap) bond of L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. ENP1has a different substrate specificity and cellular role than MpaA (MpaA does not belong to this group). ENP1 hydrolyzes the gamma-D-Glu-Dap bond of MurNAc-tripeptide and MurNAc-tetrapeptide, as well as the amide bond of free tripeptide and tetrapeptide . ENP1 is active on spore cortex peptidoglycan, and is produced at stage IV of sporulation in forespore and spore integuments.
Probab=99.97 E-value=1.4e-31 Score=273.47 Aligned_cols=193 Identities=22% Similarity=0.294 Sum_probs=148.8
Q ss_pred CCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC----ChhhhhcccceeEEEEeccCcC
Q psy8322 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG----DSNIRFLLDNTRIHLLPNLNPD 371 (651)
Q Consensus 296 egr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~----d~~v~~ll~~~~~~i~P~~NpD 371 (651)
|||+|++++|++++ |.|+++|++|||||+|++++++++++||.+|..+ +..+++||++++|+|||++|||
T Consensus 3 eGR~I~~~~ig~~~------~~v~i~agiHarE~~~~~~~l~~i~~L~~~~~~~~~~~~~~~~~lL~~~~i~ivP~~NPD 76 (255)
T cd06229 3 LGRDIYEVKLGNGP------KTVFYNASFHAREWITTLLLMKFIEEYARAYENNEKLGGYDLRELLENVTICFVPMVNPD 76 (255)
T ss_pred CCceeeEEEEcCCC------ceEEEECCccccchhhHHHHHHHHHHHHHHhccCccccchhHHHHHhcCeEEEEeCccCC
Confidence 89999999998643 9999999999999999999999999999998763 3468999999999999999999
Q ss_pred Cceeeecc----------cccCCCCC-------CCceeEeeccCCCCCCC-----------------CCCCCCChHHHHH
Q psy8322 372 GSELAVEG----------NCRSGRGR-------TPPFLISLFLPFPVTKN-----------------KPALTPDTDVFLH 417 (651)
Q Consensus 372 G~~~~~~~----------~~~~~kgr-------~~~~gvdlnrnf~~~~~-----------------~~~~~~~~~~f~~ 417 (651)
|+++++.+ +++|+++| .|+.|||||||||+.|. .+.++||++++..
T Consensus 77 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~GVDLNRNf~~~w~~~~~~s~~p~~~~y~G~~p~SEpEtral~~ 156 (255)
T cd06229 77 GVEIVQNGPYAIRNYYLELLVINAGSINFKEWKANARGVDLNRNFPAGWEKEKAGPKAPAPRNYKGEQPLSEPETIALAE 156 (255)
T ss_pred chheeeecccccccchhhhHHhhcCCCcccccccCCcccccCCCCCCCCCcCCCCCCCCCccCcCCCCCCCchhHHHHHH
Confidence 99999876 34566664 46799999999998764 3468899999999
Q ss_pred HHHHhh-ccCCCCcCCC-----CCCCC-------------ccccccCcceeccceEeccCcccchhhhccceeEEEEEec
Q psy8322 418 LASTYA-RLHPTMHMKR-----PCPGN-------------TVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEIS 478 (651)
Q Consensus 418 l~~~~a-~~~~~~~~~~-----~~~~~-------------~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~ 478 (651)
+..++. .....+|... ++... ....+..+. ... |+++|+++||+|...++++||+||+
T Consensus 157 ~~~~~~~~~~i~~Hs~g~~i~~~~~~~~~~~~~~~~~~~~~~~gy~~~~--~~~-~~~~G~~~Dw~~~~~gi~s~t~El~ 233 (255)
T cd06229 157 LTRENRFRAVLAYHSQGEEIYWGYGGLEPPESQKMAELLAEVSGYELVD--SES-KRSYGGYKDWFIQKFRRPGFTIEIG 233 (255)
T ss_pred HHHhCCCeEEEEecCCCCeEEecCCCCCchHHHHHHHHHhhccCCcccc--ccc-cCCCCCHHHHHHhhcCCeEEEEEeC
Confidence 887652 1111122110 00000 001122221 112 8999999999999878889999999
Q ss_pred ccCCC-CCCCcchhhhhchH
Q psy8322 479 CCRYP-APSEIPIHWRSNQN 497 (651)
Q Consensus 479 ~~~~p-~~~~i~~~w~~nr~ 497 (651)
.++-| |.++++.+|++|+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~ 253 (255)
T cd06229 234 RGTNPLPLSQFKTIYKENKG 253 (255)
T ss_pred CCCCCCChHHhHHHHHhhcC
Confidence 87665 68999999999975
No 44
>PRK10602 murein peptide amidase A; Provisional
Probab=99.97 E-value=3e-31 Score=264.43 Aligned_cols=185 Identities=23% Similarity=0.322 Sum_probs=144.7
Q ss_pred EEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEE
Q psy8322 49 TELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLL 128 (651)
Q Consensus 49 ~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~ii 128 (651)
+...++|+|+|||||++++++.. +|+.++++||+||+||+|+++++++++.|..+ ...++||
T Consensus 15 ~~~~~iG~S~egrpi~~l~~~~~-----~~~~vli~agiHG~E~~g~~~~~~l~~~l~~~-------------~~~~~ii 76 (237)
T PRK10602 15 PGTEHYGRSLLGAPLLWFPAPAA-----SRESGLILAGTHGDETASVVTLSCALRTLTPS-------------LRRHHVV 76 (237)
T ss_pred ccccccccccCCCceEEEEcCCC-----CCceEEEEecCCCCcHHHHHHHHHHHHhhhhh-------------ccceEEE
Confidence 46789999999999999999763 47899999999999999999999999988752 2357899
Q ss_pred eccCcccccccccccccCCCCCCCccCcCCCCCCCc-ccCCCC------CCCCC-----CCCCCCCCcHHHHHHHHHHHh
Q psy8322 129 PNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPD-YFRHNR------SNIPT-----LVSTSQSIDPEVQAVIDWMNS 196 (651)
Q Consensus 129 P~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~-~w~~~~------s~~p~-----y~G~~~~sepEt~al~~~~~~ 196 (651)
|++|||||++.. |.||+|||||||||. .|...+ +..|| |+|+.|+|||||+++.+++.+
T Consensus 77 pvvNPDG~~~~~---------R~n~~GvDLNRnFp~~~w~~~~~~~~w~~~~~~~~~~~y~G~~p~SepEt~al~~~i~~ 147 (237)
T PRK10602 77 LAVNPDGCQLGL---------RANANGVDLNRNFPAANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQALCQLIHR 147 (237)
T ss_pred EEECcccccccc---------ccCCCCCchhhcCCCcccccccccccccCCCCccchhhccCCCCCCCHHHHHHHHHHHH
Confidence 999999999764 789999999999997 686543 23455 899999999999999999999
Q ss_pred CCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccccccccccchhhhccc--CCCCeE
Q psy8322 197 VPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWM--NSVPFV 274 (651)
Q Consensus 197 ~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dw~--~~~p~~ 274 (651)
+++.+++++|+ ||.+...+ +..++.+.+.+ + +...-.....|+..|+..+|+ .++|.
T Consensus 148 ~~~~~~~s~Hs-------P~~~~~~~-----~~~~~~~~la~-------a-f~~~~~~~~~y~~~Gs~~~~a~~~giP~- 206 (237)
T PRK10602 148 LQPAWVVSFHD-------PLACIEDP-----RHSELGEWLAQ-------A-FELPLVTSVGYETPGSFGSWCADLNLHC- 206 (237)
T ss_pred cCCCEEEEeec-------cccccCCc-----cchHHHHHHHH-------H-hCCCeEeecCCCCCCcHHHHHHHcCCcE-
Confidence 99999999999 56553211 11111111111 1 111112356788889998998 58998
Q ss_pred EEEEeeC
Q psy8322 275 MSLQLHG 281 (651)
Q Consensus 275 ~t~el~g 281 (651)
+++|+++
T Consensus 207 it~El~~ 213 (237)
T PRK10602 207 ITAELPP 213 (237)
T ss_pred EEEecCC
Confidence 9999986
No 45
>cd06235 M14_Nna1_like_2 Subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human Nna1/AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induc
Probab=99.97 E-value=1e-30 Score=266.41 Aligned_cols=206 Identities=18% Similarity=0.270 Sum_probs=159.6
Q ss_pred cCCcEEEEEeccccCCceEEEEEEcCCCC---CCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhc
Q psy8322 45 YANMTELYSIGKSVLGKDLLVVNISTAPV---HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLD 121 (651)
Q Consensus 45 ~p~~~~~~~iG~S~egr~i~~v~i~~~~~---~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~ 121 (651)
.+.++++.+||+|.+||+|++++|++... ...+||.|+|.|++||+||+|+++++++++.|+. .+++++.|++
T Consensus 9 ~~~~~~~~~iG~S~eGr~i~~l~i~~~~~~~~~~~~k~~V~i~a~iH~~E~~~s~~~~~ll~~Ll~----~~~~~~~Ll~ 84 (258)
T cd06235 9 NNQYLKRKILCTTLGGLPVPLLTITSPSSKSIPIKKKKVIVITARQHPGETNSSFVMQGFIDFLLS----DSPEAQYLRE 84 (258)
T ss_pred CCCceEEEEeEEcCCCCeeeEEEEeCCcccccccCCCcEEEEECCcCCCChHHHHHHHHHHHHHhc----CCHHHHHHHh
Confidence 56789999999999999999999997531 2357999999999999999999999999999986 3578999999
Q ss_pred CceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC----
Q psy8322 122 NTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV---- 197 (651)
Q Consensus 122 ~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~---- 197 (651)
+++|+||||+||||+++.. .|.||.|+||||||.. |.++++||+++++++++++
T Consensus 85 ~~~~~iiPm~NPDG~~~g~--------~R~n~~GvDLNR~w~~--------------p~~~~~PE~~~~~~~i~~~~~~~ 142 (258)
T cd06235 85 NFIFKIIPMLNPDGVIHGN--------YRCSLSGIDLNRQWKN--------------PDKKLHPEIYHVKQLIKKLSQER 142 (258)
T ss_pred ccEEEEEccccccceeecC--------CcCCCCCCCcCCCCCC--------------CCcccCcHHHHHHHHHHHHhccC
Confidence 9999999999999998754 5899999999999972 4579999999999999997
Q ss_pred CcEEEEEEecCcee-eeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccc---cccccccchhhhccc-CCCC
Q psy8322 198 PFVMSLQLHGGNVV-ASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVST---SQSIDPEVQAVIDWM-NSVP 272 (651)
Q Consensus 198 ~~~~~i~~H~~~~~-~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~dw~-~~~p 272 (651)
++.+++|+||++.. -.|+|+....... ..+...+.++++...... .+.+... ...-.+.++.+.-|- .+++
T Consensus 143 ~~~~~iDlH~~s~~~~~F~yg~~~~~~~---~~~~~~~~~p~~~~~~~~-~f~~~~c~f~~~~~k~~tar~~~~~~~~~~ 218 (258)
T cd06235 143 NIALFIDLHGHSRKKNSFMYGCSNSDDP---LNYYKERLFPKLLSKLCP-YFSFSSCSFKVQKDKEGTARVALWRELGIP 218 (258)
T ss_pred CceEEEecccccccCCeeeecCCCCCcH---HHHHHHHHHHHHHHhhCc-ccCccccccCCCCCCCCcHHHHHHHHcCCc
Confidence 89999999998864 4578888754421 123455666766554432 2221111 122233344444444 4788
Q ss_pred eEEEEEee
Q psy8322 273 FVMSLQLH 280 (651)
Q Consensus 273 ~~~t~el~ 280 (651)
+++|+|..
T Consensus 219 ~syTlE~s 226 (258)
T cd06235 219 NSYTLETS 226 (258)
T ss_pred eEEEEeee
Confidence 99998875
No 46
>cd06238 Peptidase_M14-like_1_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T
Probab=99.97 E-value=7.8e-31 Score=267.44 Aligned_cols=203 Identities=21% Similarity=0.176 Sum_probs=150.5
Q ss_pred eccccCCceEEEEEEcCCCC-----------------------CCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhc
Q psy8322 54 IGKSVLGKDLLVVNISTAPV-----------------------HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYI 110 (651)
Q Consensus 54 iG~S~egr~i~~v~i~~~~~-----------------------~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~ 110 (651)
+|+|.|||+|.++.|++... ....+|.|||.++|||+||+|++++++++++|+.
T Consensus 1 ~G~s~egR~l~~~~I~s~~n~~~l~~~~~~~~~la~p~~~~~~~~~~~~~v~i~~~iH~~E~~g~~~~l~l~~~L~~--- 77 (271)
T cd06238 1 YGRTHEGRPLLLATITSPENIARLDQIREDHLALADPAATSSLISDQPVVVWLGYSVHGNEISGTEAALLTAYHLAA--- 77 (271)
T ss_pred CCcCCCCCeeEEEEEeCHHHHHhHHHHHHHHHHhcCccccccccccCCcEEEEECCcCCCChHHHHHHHHHHHHHHH---
Confidence 69999999999999998631 1236899999999999999999999999999998
Q ss_pred cCChhHHHhhcCceEEEEeccCcccccc-cc----------cccc--cC-----CCCCCCccCcCCCCCCCcccCCCCCC
Q psy8322 111 RGDSNIRFLLDNTRIHLLPNLNPDGSEL-AV----------EGNC--RS-----GRGRNNINNHDLNRQFPDYFRHNRSN 172 (651)
Q Consensus 111 ~~d~~~~~ll~~~~~~iiP~~NPDG~~~-~~----------~~~r--~~-----~~~r~n~~GvDLNRnf~~~w~~~~s~ 172 (651)
+.++.++++|++++|+|+|++||||+++ +. +.+| |+ ..+|.||+|+||||||.
T Consensus 78 ~~~~~~~~ll~~~~i~i~P~~NPDG~~r~~~w~~~~~~~~~~~d~~~r~~~~~wp~~R~n~~g~DLNRD~~--------- 148 (271)
T cd06238 78 AQGDEIEALLDNAVVLIDPMQNPDGRDRFVNWYNSNRGMVPSADPQDREHNEPWPGGRTNHYWFDLNRDWL--------- 148 (271)
T ss_pred cCCHHHHHHHhcCEEEEEeccCCCHHHHHHHhhhhccCCccccchhhhhcccCCccccccccCcccccccc---------
Confidence 4688999999999999999999999995 32 2233 22 33689999999999997
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCc---eeeeec---cccccCCCCCCCCchhhhhhhhHHHHhhcc-
Q psy8322 173 IPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGN---VVASYP---YDSFYGESKNNINNHDLNRQFPDYFRHNRS- 245 (651)
Q Consensus 173 ~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~---~~~~~P---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 245 (651)
++++|||+++.+++.+++|.+++|+|+++ .++++| +++....++ .+.++...+.+......+
T Consensus 149 --------~~s~pEtra~~~~~~~~~p~~~~D~H~~g~~~~~~~~P~~~~~~np~~~p---~~~~~~~~~g~~~~~al~~ 217 (271)
T cd06238 149 --------PLTQPESRGRLAAYHEWRPNVVVDFHEMGTNSTYFFAPGAPPRTNPLTPD---QNRDLTATIGRNHAKAFDE 217 (271)
T ss_pred --------cccCHHHHHHHHHHHhcCCeEEEEeccCCCccceEEeCCCCccCCCCCCH---HHHHHHHHHHHHHHHHHHh
Confidence 59999999999999999999999999976 677788 333211111 122222223222111111
Q ss_pred --cCCccccccccccccchhhhcccCCCCeEEEEEee
Q psy8322 246 --NIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLH 280 (651)
Q Consensus 246 --~~~~~~~~~~~~~~~~g~~~dw~~~~p~~~t~el~ 280 (651)
..+..+...+.+||..|++..|..+..- +++|..
T Consensus 218 ~G~~Y~t~~~~d~~ypg~g~s~~~~~g~ig-~l~E~~ 253 (271)
T cd06238 218 IGWLYFTREVFDDFYPGYGSTYPDLNGAIG-MLYEQA 253 (271)
T ss_pred cCCcEEecccccccccCcCcchhhhcCcee-EEEEec
Confidence 1122334568899999999988865442 344443
No 47
>cd06236 M14_AGBL5_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-5, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL5 and the mouse cytosolic carboxypeptidase (CCP)-5. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal
Probab=99.97 E-value=3.7e-30 Score=263.87 Aligned_cols=203 Identities=17% Similarity=0.241 Sum_probs=162.4
Q ss_pred cEEEEEeccccCCceEEEEEEcCCCCC----------------------CCCCCeEEEEecccCCChhHHHHHHHHHHHH
Q psy8322 48 MTELYSIGKSVLGKDLLVVNISTAPVH----------------------QLGVPNVKIVGNIHGDEPIGREIILRLLEHL 105 (651)
Q Consensus 48 ~~~~~~iG~S~egr~i~~v~i~~~~~~----------------------~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L 105 (651)
+++.+.+|+|.|||+|++|+|++.... ..+||.|||.|++||+||.|++++++++++|
T Consensus 15 y~~~~~Lg~S~eGR~i~lLtITs~~~~~~~~~~~~~~l~~~~~~~~~~~~~~K~~V~I~ariHp~E~~~s~~~~~ll~~L 94 (304)
T cd06236 15 YYHREVLCYSLEGRRIDLLTITSCHGKLEQREPRLEGLFPDRKTPRPHFFFGKPVVFISSRVHPGETPSSFVFNGFLKFL 94 (304)
T ss_pred EEEEEEeEECCCCCceEEEEEecCcccccccccccccccccccccccccccCCcEEEEECCcCCCCchHHHHHHHHHHHH
Confidence 578899999999999999999976421 2579999999999999999999999999999
Q ss_pred HHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcH
Q psy8322 106 VVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDP 185 (651)
Q Consensus 106 ~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sep 185 (651)
+. ..|++++.|+++++|+||||+||||+++.+ .|.+|.|+||||+|- ++.++++|
T Consensus 95 l~---~~d~~a~~L~~~~~~~IvPmlNPDGv~~g~--------~R~~~~G~DLNR~y~--------------~p~~~~~P 149 (304)
T cd06236 95 LN---KDDPRAALLRRRFVFKLIPMLNPDGVYRGH--------YRTDTRGVNLNRVYL--------------NPDPELHP 149 (304)
T ss_pred Hh---CCCHHHHHHHhCCeEEEEEeEcccccccCc--------cccCCcCCCcCcCCC--------------CCCcccCH
Confidence 97 358899999999999999999999999866 589999999999985 78899999
Q ss_pred HHHHHHHHHHhC----CcEEEEEEecCceeee-eccccccCCCCCCCCchhhhhhhhHHHHhhcccCCcccccc------
Q psy8322 186 EVQAVIDWMNSV----PFVMSLQLHGGNVVAS-YPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTS------ 254 (651)
Q Consensus 186 Et~al~~~~~~~----~~~~~i~~H~~~~~~~-~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 254 (651)
|++++++++..+ ++.++||+||.+.... |+||...... ......+.++++...+... +.+.+..
T Consensus 150 ei~aik~~i~~~~~~~~i~~yiDlH~hs~~~~~F~Yg~~~~~~----~~~~~~~~fp~l~~~~~~~-F~~~~c~F~~~~m 224 (304)
T cd06236 150 SIYAIKKLILYLHEESRLAFYIDLHAHASKRGCFIYGNALEDE----SQQVENLLFPKLISLNSPH-FDFDGCNFSEKNM 224 (304)
T ss_pred HHHHHHHHHHHhhccCCceEEEEecccccccceEeeecCCChH----HHHHHHHHHHHHHHhcCcc-cccccceeccccc
Confidence 999999999875 5999999999988765 8999864321 1122345677776666432 2222111
Q ss_pred -------ccccccchhhhccc-CCCCeEEEEEee
Q psy8322 255 -------QSIDPEVQAVIDWM-NSVPFVMSLQLH 280 (651)
Q Consensus 255 -------~~~~~~~g~~~dw~-~~~p~~~t~el~ 280 (651)
+.-...++.+.=|- .+++++||+|.-
T Consensus 225 ~~~d~~~~~~k~gt~Rv~~~~~~~i~~syTlE~s 258 (304)
T cd06236 225 YAKDKRDGLSKEGSGRVAVYKATGIIHSYTLECN 258 (304)
T ss_pred cccccccccCcCCcchhhHhhhhCCceEEEEEEe
Confidence 12344577777776 588999988874
No 48
>cd06227 Peptidase_M14-like_2 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=99.97 E-value=1.8e-30 Score=265.57 Aligned_cols=194 Identities=21% Similarity=0.234 Sum_probs=146.0
Q ss_pred CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC
Q psy8322 270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG 349 (651)
Q Consensus 270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~ 349 (651)
.+|. .+....|. ++ |||+|++|+|+.+......||.|+++||+|||||+|++++++++++|+.+|...
T Consensus 19 ~~p~-~~~~~ig~----S~-------egr~i~~i~~~~~~~~~~~k~~i~i~agiHarE~i~~~~~l~li~~L~~~~~~~ 86 (272)
T cd06227 19 NIRL-SRLGELIE----SV-------KVRNFSSITLNPNGDPSKKKVKALLLFGEHARELISPETGLHLLSNLCGELAET 86 (272)
T ss_pred HCCC-cEEeeeee----cc-------CCceeeEEEecCCCCCCCCCCEEEEECCccCCchhhHHHHHHHHHHHHHhcccc
Confidence 5565 44444555 77 999999999997642224699999999999999999999999999999998642
Q ss_pred ---ChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCC--------------CCCCCCCh
Q psy8322 350 ---DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKN--------------KPALTPDT 412 (651)
Q Consensus 350 ---d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~--------------~~~~~~~~ 412 (651)
++.+++||++++|+|||++||||+++.+.+++.||+++ .|||||||||+.|. .+.++||+
T Consensus 87 ~~~~~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~~~wR~N~---~GVDLNRNf~~~w~~~~~~~~~~~y~G~~~~sEpEt 163 (272)
T cd06227 87 FDWGDLLKNILDNFDLKIIPNENPDGRKKVESGNYCLRENE---NGVDLNRNYGADWGFKEDDYEDEEYSGPAPFSEPET 163 (272)
T ss_pred cchhHHHHHHHhcCcEEEEeccCCchheeEeccCcccccCC---ccccccccCCcccccCCCCccccccCCCCCCCcHHH
Confidence 37899999999999999999999999999999998877 69999999987653 34568999
Q ss_pred HHHHHHHHHhh-ccCCCCcC------------CCCC-CCC-------------ccccccCcceeccceEeccCcccchhh
Q psy8322 413 DVFLHLASTYA-RLHPTMHM------------KRPC-PGN-------------TVLKFENGVTNGAAWYSFSGGMADYNY 465 (651)
Q Consensus 413 ~~f~~l~~~~a-~~~~~~~~------------~~~~-~~~-------------~~~~~~~gi~n~~~~y~~sG~~~D~~y 465 (651)
+++..+..++. .....+|. ...+ +.. ....+..|.......|+++|+++||+|
T Consensus 164 ~av~~~~~~~~~~~~i~~Hs~~~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~G~~~~~~~Y~a~G~s~Dway 243 (272)
T cd06227 164 RVLRDLLTSFSPDVFLSVHSGTLALFTPYAYKKEQPEPNLAEDMRILLLISNKHCPRCQVGSAGKLVGYLAHGTSMDYMY 243 (272)
T ss_pred HHHHHHHHhCCCeEEEEeccCCCEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceecCccceeecCCCCHHHHHh
Confidence 99999988752 01111111 0111 000 111233333332234999999999999
Q ss_pred hc-cceeEEEEEec
Q psy8322 466 LY-HGCLELTLEIS 478 (651)
Q Consensus 466 ~~-~~~~~~T~El~ 478 (651)
.. +++++||+||+
T Consensus 244 ~~~gip~s~t~EL~ 257 (272)
T cd06227 244 DVLKVPYSFTFEIY 257 (272)
T ss_pred hcCCCcEEEEEEcc
Confidence 75 66789999998
No 49
>smart00631 Zn_pept Zn_pept.
Probab=99.97 E-value=1.8e-30 Score=269.02 Aligned_cols=205 Identities=30% Similarity=0.379 Sum_probs=161.1
Q ss_pred CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC
Q psy8322 270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG 349 (651)
Q Consensus 270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~ 349 (651)
.+|..++.+..|. ++ |||+|++++|++++ ...||.|+++|++||+||+|++++++++++|+.+|..
T Consensus 17 ~~~~~v~~~~iG~----S~-------~Gr~i~~~~i~~~~--~~~k~~v~i~a~~Hg~E~~g~~~~~~~i~~L~~~~~~- 82 (277)
T smart00631 17 RYPDLVRLVSIGK----SV-------EGRPIWVLKISDGG--SHNKPAIFIDAGIHAREWIGPATALYLINQLLENYGR- 82 (277)
T ss_pred HCCCceEEEecee----cC-------CCCceEEEEEeCCC--CCCCcEEEEECCccccccccHHHHHHHHHHHHHhccc-
Confidence 5566677777777 77 99999999999864 3469999999999999999999999999999999977
Q ss_pred ChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC---CceeEeeccCCCCCC-------------CCCCCCCChH
Q psy8322 350 DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT---PPFLISLFLPFPVTK-------------NKPALTPDTD 413 (651)
Q Consensus 350 d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~---~~~gvdlnrnf~~~~-------------~~~~~~~~~~ 413 (651)
|+.++.||++++|+|||++||||+++.+.+++.||++|. +..|||||||||+.| ..+.++||++
T Consensus 83 ~~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~wr~~r~~~~~~~GvDLNRnf~~~w~~~~~p~~~~y~G~~~~sepEt~ 162 (277)
T smart00631 83 DPRITKLLDKTDIYIVPVLNPDGYEYTHTGDRLWRKNRSPNSNCRGVDLNRNFPFHWGKTGNPCSETYAGPSPFSEPETK 162 (277)
T ss_pred CHHHHHHHHcCcEEEEEeecCchhhheecccccccCCCCCCCCCcCcccCCCCCCCCCCCCCCCCCCcCCCCCCCcHHHH
Confidence 899999999999999999999999999999999999998 899999999999754 2346799999
Q ss_pred HHHHHHHHhh--ccCCCCcCC---------CCCCCC---------------------ccccccCcceeccceEeccCccc
Q psy8322 414 VFLHLASTYA--RLHPTMHMK---------RPCPGN---------------------TVLKFENGVTNGAAWYSFSGGMA 461 (651)
Q Consensus 414 ~f~~l~~~~a--~~~~~~~~~---------~~~~~~---------------------~~~~~~~gi~n~~~~y~~sG~~~ 461 (651)
++..+..++. .....+|.. ..+... ....+..|...+. +|+++|+++
T Consensus 163 ai~~~~~~~~~~~~~id~Hs~~~~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~y~~g~~~~~-~y~~~G~~~ 241 (277)
T smart00631 163 AVRDFIRSNRRFVLYIDLHSYSQLILYPYGYTKNDLPPNVDDLDAVAKALAKALASVHGTRYTYGISNGA-IYPASGGSD 241 (277)
T ss_pred HHHHHHHhcCCeeEEEEeccCCcEEEecCcCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCccccccccCc-ccCCCCchh
Confidence 9999888762 111122221 011100 0111344555555 488999999
Q ss_pred chhhhccc-eeEEEEEecccC---C-CCCCCcc
Q psy8322 462 DYNYLYHG-CLELTLEISCCR---Y-PAPSEIP 489 (651)
Q Consensus 462 D~~y~~~~-~~~~T~El~~~~---~-p~~~~i~ 489 (651)
||+|...+ ++++|+||++++ | +|.+++.
T Consensus 242 D~~~~~~gi~~~~t~El~~~~~~~~~~p~~~~~ 274 (277)
T smart00631 242 DWAYGTLGIPFSFTLELRDDGRYGFLLPPSQII 274 (277)
T ss_pred hhhhccCCCcEEEEEEecCCCCCCccCCHHHcc
Confidence 99998755 799999999875 4 3445444
No 50
>cd06907 M14_AGBL2-3_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-2, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subgroup includes the human AGBL-2, and -3, and the mouse cytosolic carboxypeptidase (CCPs)-2, and -3. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N
Probab=99.97 E-value=1.2e-29 Score=254.73 Aligned_cols=207 Identities=16% Similarity=0.261 Sum_probs=160.3
Q ss_pred cCCcEEEEEeccccCCceEEEEEEcCCCC---CCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhc
Q psy8322 45 YANMTELYSIGKSVLGKDLLVVNISTAPV---HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLD 121 (651)
Q Consensus 45 ~p~~~~~~~iG~S~egr~i~~v~i~~~~~---~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~ 121 (651)
.+.++++++||+|.|||+|++|+|++... ....||.|||+|++|++|+.|..++..+++.|+. .++.++.|++
T Consensus 10 ~~~~~~~~~lg~S~eGR~i~~LtIt~~~~~~~~~~~K~~I~I~ariHp~E~~~s~~~~gll~~L~~----~~~~a~~Lr~ 85 (261)
T cd06907 10 RSKFCKLRVLCRTLAGNTVYLLTITSPSSNPSLAAAKKAVVLTARVHPGETNASWMMKGFLDFLTS----NSPDAQLLRD 85 (261)
T ss_pred cCCceEEEEEEECCCCCeeeEEEEcCCCccccccCCCCEEEEECCcCCChHHHHHHHHHHHHHHhc----CCHHHHHHHh
Confidence 34689999999999999999999997531 2357999999999999999999999999999984 5889999999
Q ss_pred CceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHh----C
Q psy8322 122 NTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNS----V 197 (651)
Q Consensus 122 ~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~----~ 197 (651)
+++|+||||+||||+++.+ .|.+|.|+||||||.. +.+.+.||+.+++++++. .
T Consensus 86 ~~~f~IvPmlNPDGv~~G~--------~R~~~~G~DLNR~w~~--------------p~~~~~P~i~~~k~li~~l~~~~ 143 (261)
T cd06907 86 TFIFKIVPMLNPDGVIVGN--------YRCSLAGRDLNRNYKT--------------PLKDSFPTIWYTKNMVKRLLEER 143 (261)
T ss_pred cCCEEEEEeecCccccccC--------CcCCCcCCCCCcCCCC--------------CCcccCchHHHHHHHHHHHHhcC
Confidence 9999999999999999876 6899999999999974 336788998888877654 3
Q ss_pred CcEEEEEEecCceeee-eccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccc---cccccccchhhhcccCCCCe
Q psy8322 198 PFVMSLQLHGGNVVAS-YPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVST---SQSIDPEVQAVIDWMNSVPF 273 (651)
Q Consensus 198 ~~~~~i~~H~~~~~~~-~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~dw~~~~p~ 273 (651)
++.+++|+||.++... ||||+.....+ ....-.+.+|++...+....+.+.+. .+.-...|+.+.=|.....+
T Consensus 144 ~i~~ylDlHghs~~~~~F~yG~~~~~~~---~~~~~~~~fp~l~~~~~~~~F~~~~c~F~~~~~k~~t~Rv~~~~~~~~~ 220 (261)
T cd06907 144 EVILYCDLHGHSRKNNVFMYGCENKLNP---EKWLHERVFPLMMSKNAPDKFSFRSCKFKVQKSKEGTGRVVMWRLGILN 220 (261)
T ss_pred CeEEEEEeccchhccceEeecCCCCCCH---HHHHHHHHHHHHHHhcCccceecccCCccCCCCCCCCceEEhhhhcCce
Confidence 6999999999999844 99999754421 12223467787777665433333222 23334456666667654558
Q ss_pred EEEEEee
Q psy8322 274 VMSLQLH 280 (651)
Q Consensus 274 ~~t~el~ 280 (651)
++|+|.-
T Consensus 221 syTlE~s 227 (261)
T cd06907 221 SFTMEAT 227 (261)
T ss_pred EEEEeeE
Confidence 8888764
No 51
>cd06905 Peptidase_M14-like_8 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=99.97 E-value=3.7e-30 Score=271.99 Aligned_cols=200 Identities=24% Similarity=0.277 Sum_probs=152.8
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI 347 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~ 347 (651)
+.+|..++++..|. || |||+|++|+||++. .....||+||++|+||||||+|++++++++++|+++|+
T Consensus 19 ~~~P~lv~l~~IG~----S~-------EGR~I~~l~Is~~~~~~~~~Kp~I~i~~giHarEwig~~~~l~li~~Ll~~y~ 87 (360)
T cd06905 19 SAYPQLCSLESIGK----SY-------EGRDIWLLTLTNQATGPDREKPAFWIDANIHATEVTGSAVALYVIQTLLNGYG 87 (360)
T ss_pred HHCCCceEEEEeee----cC-------CCCceEEEEecCCCCCCCCCCcEEEEecCCCCCchHHHHHHHHHHHHHHHhcc
Confidence 46788888888888 88 99999999998764 33457999999999999999999999999999999997
Q ss_pred cCChhhhhcccceeEEEEeccCcCCceeeec-ccccCCCCCCCc------------------------------------
Q psy8322 348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVE-GNCRSGRGRTPP------------------------------------ 390 (651)
Q Consensus 348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~-~~~~~~kgr~~~------------------------------------ 390 (651)
+ |++++.||++++|+|||++||||+++++. ++++|||+|.+.
T Consensus 88 ~-d~~i~~lLd~~~~~IvP~vNPDG~e~~~~~~~r~wRk~r~~~~~~~~~~g~~~~D~n~D~~~~~mr~~d~~g~w~~~~ 166 (360)
T cd06905 88 S-DPEVTRLLDGYTFYILPRLNPDGAEQALTHPPYVRRSSRRPYPYPDRIDGLYPEDIDGDGLILQMRVKDPCGAWKVSE 166 (360)
T ss_pred C-CHHHHHHHhcCeEEEEeeeCCChheEEeeccccccccCCCCcccccccccccccccCccchhheeecccccccccccc
Confidence 7 89999999999999999999999999999 999999887521
Q ss_pred -----------------------------------------eeEeeccCCCCCC----------CCCCCCCChHHHHHHH
Q psy8322 391 -----------------------------------------FLISLFLPFPVTK----------NKPALTPDTDVFLHLA 419 (651)
Q Consensus 391 -----------------------------------------~gvdlnrnf~~~~----------~~~~~~~~~~~f~~l~ 419 (651)
.|||||||||+.| ..+.++||+.++..+.
T Consensus 167 ~~p~~m~~~~~~~~~g~~y~~~~eg~~~~~dg~~~~~~~~~~GvDlNRNf~~~W~~~~~~~y~G~~p~SEpEt~av~~~~ 246 (360)
T cd06905 167 RDPRIMVRREPDEFGGTYYRLLPEGLIRNYDGYNIKIAPPLEGLDFNRNFPHDWRPEGEQYGAGPFPFSEPETRAVVEFW 246 (360)
T ss_pred ccchhhccccccccCceeeeecccccccccccccccccccccCCCcccCcCCCCCCCCCcCCCCCCCCChHHHHHHHHHH
Confidence 4999999999776 2457899999998887
Q ss_pred HHhhc--cCCCCcC---------CCCCCCC--cc---------ccc--cCc--ceeccce------EeccCcccchhhhc
Q psy8322 420 STYAR--LHPTMHM---------KRPCPGN--TV---------LKF--ENG--VTNGAAW------YSFSGGMADYNYLY 467 (651)
Q Consensus 420 ~~~a~--~~~~~~~---------~~~~~~~--~~---------~~~--~~g--i~n~~~~------y~~sG~~~D~~y~~ 467 (651)
.+..+ .+..+|. +..|... .. ... ..| ..++..- ++++|+++||+|..
T Consensus 247 ~~~~~i~~~is~Hsyg~~il~P~g~~~~~~~~~~~~~~~~~la~~~~~~~~y~~~~~~~~~~~~~~~~~~G~~~Dw~y~~ 326 (360)
T cd06905 247 TDHPNINGFISYHTYSGVILRPYSDKPDDQMPVDDLELYKALGEKGEELTGYPTVSVYHEFRYHPKEVTYGAFDDWAYDH 326 (360)
T ss_pred hcCCCeEEEEEecCCcCeeeeCCCCCcCcCCChhhHHHHHHHHHHHHHhcCccccccccceecCCcccccCChhhhhhhc
Confidence 65421 1112222 1111110 00 000 000 0111001 38999999999998
Q ss_pred cceeEEEEEeccc
Q psy8322 468 HGCLELTLEISCC 480 (651)
Q Consensus 468 ~~~~~~T~El~~~ 480 (651)
.++++||+||+..
T Consensus 327 ~gi~s~t~EL~~~ 339 (360)
T cd06905 327 LGIFAFTVELWDL 339 (360)
T ss_pred CCeEEEEEEcCCC
Confidence 7779999999853
No 52
>cd06241 Peptidase_M14-like_1_4 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.96 E-value=5.5e-29 Score=254.29 Aligned_cols=163 Identities=28% Similarity=0.324 Sum_probs=139.4
Q ss_pred HHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCC------CCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHh
Q psy8322 36 EELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPV------HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEY 109 (651)
Q Consensus 36 ~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~------~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~ 109 (651)
+||++|++++| .+++.+||+|.|||+|++++|+.+.. ...+||.|||.|||||+||.|.+++++|++.|+.+.
T Consensus 1 a~~~~La~~~~-~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~~~~~kp~v~i~agiH~~E~~G~~a~~~ll~~L~~~~ 79 (266)
T cd06241 1 AFLERLAAASP-LIRLESFGKTPEGRPLHLLVLSKDGAFTPEEAKRSGKPVVLVQAGIHAGEIDGKDAGLMLLRDLADGK 79 (266)
T ss_pred CHHHHHHHhCC-ceEEEEeEeCCCCCeeEEEEEecCCccchhhhcccCCCEEEEeCCcCCCCchHHHHHHHHHHHHHhcc
Confidence 47999999996 58999999999999999999997541 125799999999999999999999999999999742
Q ss_pred ccCChhHHHhhcCceEEEEeccCcccccccccccc---cC---CCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCC
Q psy8322 110 IRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC---RS---GRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSI 183 (651)
Q Consensus 110 ~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r---~~---~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~s 183 (651)
. ..+|++++|+|||++||||+++.....| +. ...|.|++|+||||||+ ..+
T Consensus 80 ---~---~~ll~~~~i~ivP~~NpDG~~~~~~~~r~~q~gp~~~~~R~na~g~DLNRdf~-----------------~~~ 136 (266)
T cd06241 80 ---K---DALLDKVVLVFIPVFNVDGHERRSPYNRTNQNGPEEYGWRGNARNLNLNRDFI-----------------KLD 136 (266)
T ss_pred ---h---HHHHhCCEEEEEeCCCccHHHhcccccccccCCCCccCceecccceecCCCCc-----------------ccC
Confidence 2 2899999999999999999998765444 11 23689999999999998 368
Q ss_pred cHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCC
Q psy8322 184 DPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGES 223 (651)
Q Consensus 184 epEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~ 223 (651)
+||+|++.+++.+++|.++||+|+.+. ..|+|+.+...+
T Consensus 137 ~pEtra~~~~~~~~~p~~~iD~H~~~g-~~~~yd~t~~~~ 175 (266)
T cd06241 137 APEMRAFAKLFNKWNPDLFIDNHVTDG-ADYQYDLTYDFT 175 (266)
T ss_pred CHHHHHHHHHHHHhCCCEEEEeccCCC-cCceeeeccccc
Confidence 999999999999999999999998765 378888776554
No 53
>cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally ac
Probab=99.96 E-value=2.3e-29 Score=268.02 Aligned_cols=142 Identities=35% Similarity=0.593 Sum_probs=128.9
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI 347 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~ 347 (651)
..+|..+++...|. |+ |||+|++|+||+++ .+.++||+|+++|+||||||+|++++++|+++||++|+
T Consensus 21 ~~~P~i~~l~~IG~----S~-------eGR~I~~l~Is~~~~~~~~~kp~v~~~g~iHg~E~ig~~~~l~li~~L~~~y~ 89 (375)
T cd03863 21 NEYPSITRLYSVGK----SV-------ELRELYVMEISDNPGIHEPGEPEFKYIGNMHGNEVVGRELLLNLIEYLCKNFG 89 (375)
T ss_pred HHCCCcEEEEEccc----CC-------ccceEEEEEEecCCCcccCCCCeEEEEccccCCcHHHHHHHHHHHHHHHHhcc
Confidence 46788888888888 88 99999999999876 45568999999999999999999999999999999997
Q ss_pred cCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCC--CCCCCChHHHHHHHHHh
Q psy8322 348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNK--PALTPDTDVFLHLASTY 422 (651)
Q Consensus 348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~--~~~~~~~~~f~~l~~~~ 422 (651)
+ |+++++||++++|||||++||||++++++++|.|+++|.|+.|||||||||+.|.. ..++||+.+++.+..++
T Consensus 90 ~-d~~v~~ll~~~~i~IvP~~NPDG~e~~~~~~~~~~~~R~n~~GVDLNRNfp~~~~~~~~~~EpEt~Av~~~~~~~ 165 (375)
T cd03863 90 T-DPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGGTVGRNNSNNYDLNRNFPDQFFQVTDPPQPETLAVMSWLKSY 165 (375)
T ss_pred C-CHHHHHHHhCCEEEEEeccCCchHHheecCCcccccccccCCCcccccCCccccccCCCCCcHHHHHHHHHHhhC
Confidence 6 99999999999999999999999999999999999999999999999999988743 34688999988887765
No 54
>cd00596 Peptidase_M14_like The M14 family of metallocarboxypeptidases (MCPs) are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring
Probab=99.96 E-value=3.7e-28 Score=239.35 Aligned_cols=117 Identities=37% Similarity=0.602 Sum_probs=105.2
Q ss_pred EEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccc-cccccccCCCCCCCccCcCCC
Q psy8322 81 VKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL-AVEGNCRSGRGRNNINNHDLN 159 (651)
Q Consensus 81 v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~-~~~~~r~~~~~r~n~~GvDLN 159 (651)
|+|+|++||+|++|+++++++++.|+..+ + ..+.++++.+|+|||++||||+++ .+ |.|..|+|||
T Consensus 1 v~i~ag~Hg~E~~g~~~~~~~~~~l~~~~---~-~~~~l~~~~~i~iiP~~NPdG~~~~~~---------R~n~~g~DlN 67 (196)
T cd00596 1 VLIIAGIHGNETIGVEAALALLRRLLSNY---G-RDTKLLENGRLLVVPVLNPDGYEAVNW---------RKNANGVDLN 67 (196)
T ss_pred CEEECCcCCCcHHHHHHHHHHHHHHHHcC---c-chHHHHhCCeEEEEeCcccccceeeeE---------EeCCCCcCcc
Confidence 68999999999999999999999999854 2 228999999999999999999998 44 7888899999
Q ss_pred CCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccC
Q psy8322 160 RQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYG 221 (651)
Q Consensus 160 Rnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~ 221 (651)
||||..|.. .++++||++++.+++.++++.+++|+|+++..++|||++...
T Consensus 68 R~f~~~~~~-----------~~~~~~e~~~~~~~~~~~~~~~~idlH~~~~~~~~p~~~~~~ 118 (196)
T cd00596 68 RNFPGLWGK-----------GPLSEPETRALAELIQQRKVDLYIDLHSGSLGVLYPYSHSDT 118 (196)
T ss_pred CCCCCcccC-----------CCCCcHHHHHHHHHHHhCCceEEEEEecCCceEEecCCCCCC
Confidence 999987753 478999999999999999999999999999999999999643
No 55
>cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Pro
Probab=99.95 E-value=8.1e-29 Score=263.78 Aligned_cols=143 Identities=33% Similarity=0.560 Sum_probs=125.6
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI 347 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~ 347 (651)
+.+|...++...|. || |||+|++|+||+++ .+..+||+|+++|+||||||+|++++++++++||++|.
T Consensus 20 ~~yP~i~~l~sIGk----S~-------EGR~L~~l~Is~~~~~~~~~kP~v~~~g~iHgrE~ig~~~~l~li~~L~~~y~ 88 (405)
T cd03869 20 EMCPNITRIYNIGK----SY-------QGLKLYAMEISDNPGEHELGEPEFRYVAGMHGNEVLGRELLLLLMQFLCQEYL 88 (405)
T ss_pred HHCCCceEEEEeEE----Cc-------CCceEEEEEEecCCccccCCCCeEEEEcccCCCcHHHHHHHHHHHHHHHHhhh
Confidence 46788888888888 88 99999999999876 44568999999999999999999999999999999997
Q ss_pred cCChhhhhcccceeEEEEeccCcCCceeeecc---cccCCCCCCCceeEeeccCCCC----CCC----------------
Q psy8322 348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG---NCRSGRGRTPPFLISLFLPFPV----TKN---------------- 404 (651)
Q Consensus 348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~---~~~~~kgr~~~~gvdlnrnf~~----~~~---------------- 404 (651)
.+|+++++||++++|||||++||||+++++++ ++.|||||.|+.|||||||||. .|.
T Consensus 89 ~~d~~v~~Ll~~~~i~IvP~~NPDG~e~s~~~~~~~~~Wrk~R~na~GVDLNRNFp~~~~~~W~~~~~~~~~~~~~~~~~ 168 (405)
T cd03869 89 AGNPRVVHLVEETRIHLLPSMNPDGYEKAYEAGSELGGWALGRWTEEGIDINHNFPDLNTILWEAEDKKKVPRKVPNHHI 168 (405)
T ss_pred cCCHHHHHHHhcCeEEEEeeeCCchhhhhhhcCccccccccCccCCCCccccCCCcccccccccccccccccccccccCC
Confidence 66999999999999999999999999999886 4789999999999999999993 221
Q ss_pred ---------CCCCCCChHHHHHHHHHh
Q psy8322 405 ---------KPALTPDTDVFLHLASTY 422 (651)
Q Consensus 405 ---------~~~~~~~~~~f~~l~~~~ 422 (651)
...++||+.+++.+..++
T Consensus 169 Pc~~~Y~G~~~~sEPET~Av~~~i~~~ 195 (405)
T cd03869 169 PIPEWYLSENATVAPETRAVIAWMEKI 195 (405)
T ss_pred CCccccCCCCCCCcHHHHHHHHHHHhC
Confidence 234678888888777764
No 56
>cd06243 Peptidase_M14-like_1_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.95 E-value=4e-28 Score=242.69 Aligned_cols=126 Identities=32% Similarity=0.451 Sum_probs=116.2
Q ss_pred eccccCCceEEEEEEcCCCCC----CCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEe
Q psy8322 54 IGKSVLGKDLLVVNISTAPVH----QLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLP 129 (651)
Q Consensus 54 iG~S~egr~i~~v~i~~~~~~----~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP 129 (651)
||+|+|||||++++|+++... ...||.|++.+++||+||+|+++++.+++.|+. +.+++++.+|++++|+|+|
T Consensus 1 iG~S~eGRpi~~l~i~~~~~~~~~~~~~~p~v~i~~giHG~E~~G~~a~l~ll~~L~~---~~~~~~~~lL~~~~i~ivP 77 (236)
T cd06243 1 IGTSQRGRPIHLVRVGFAEGPSALDIANRPTVLLVGTQHGDEPAGREALLIIARDLAF---GEDEELVPLLHQTTVLFVP 77 (236)
T ss_pred CccCCCCCeeEEEEEecCCCccccccCCCCEEEEECCcCCCChHHHHHHHHHHHHHHh---cCCHHHHHHHhcceEEEEe
Confidence 699999999999999986521 247899999999999999999999999999987 5688899999999999999
Q ss_pred ccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecC
Q psy8322 130 NLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGG 208 (651)
Q Consensus 130 ~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~ 208 (651)
++||||+++. +|.||.|+||||||+ ++++||++++.+++.+++|.+++|+|++
T Consensus 78 ~~NPDG~~~~---------~R~n~~g~DlNRd~~-----------------~~~~pEt~al~~~~~~~~p~~~iDlHe~ 130 (236)
T cd06243 78 TANPDGREAD---------TRSNADGIDINRDHL-----------------LLNTPEAQALASVLRDYRPDVVVDAHEY 130 (236)
T ss_pred CcCccHhhcC---------CcCCCCCcccCCCCC-----------------CCCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 9999999975 489999999999998 4789999999999999999999999998
No 57
>cd06244 Peptidase_M14-like_1_7 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.95 E-value=3.2e-27 Score=237.39 Aligned_cols=135 Identities=30% Similarity=0.313 Sum_probs=119.2
Q ss_pred eccccCCceEEEEEEcCCCC---------------------------CCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322 54 IGKSVLGKDLLVVNISTAPV---------------------------HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV 106 (651)
Q Consensus 54 iG~S~egr~i~~v~i~~~~~---------------------------~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~ 106 (651)
||+|.|||+|+++.|++.+. ....|+.|++++++||+|++|+++++.++++|+
T Consensus 1 iGkS~eGR~l~~~~Is~~~a~ld~~~~~~~~l~l~dp~~~~~~~~~~~~~~~k~v~~~~~iHg~E~~g~~a~l~ll~~L~ 80 (268)
T cd06244 1 AGKSAEGRDIPVVVVAKPEAAVDKYENETLPLMLENPPELADKIEDGTIEDYKPPIINNNIHPDETPGIDAQTELIEELA 80 (268)
T ss_pred CCcCCCCCeeEEEEEeCcHHHHHHHHHHhhhhhhcCcccchhhhccccccccCeEEEEeCcCCCCHHHHHHHHHHHHHHH
Confidence 79999999999999998740 013577888889999999999999999999999
Q ss_pred HHhccC--------------ChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCC
Q psy8322 107 VEYIRG--------------DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSN 172 (651)
Q Consensus 107 ~~~~~~--------------d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~ 172 (651)
.++ .. ++++++||+++.|+|+|++||||+++.. |.||+|+||||||..
T Consensus 81 ~~~-~~~~~~~~~~~~~~~~~~~i~~lL~~~~i~i~P~~NPDG~~~~~---------R~Na~G~DLNRD~~~-------- 142 (268)
T cd06244 81 QED-EIEFNTTDADGNEVTETLDVDDLLEKVIFLFNVTENPDGRVAGT---------RENANGFDLNRDNSF-------- 142 (268)
T ss_pred hcc-cccccccccccccccCCHHHHHHHhcCEEEEEecccCCcceeee---------ecCCCccccCCCCCc--------
Confidence 864 21 8899999999999999999999999754 899999999999973
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCc-eeeeec
Q psy8322 173 IPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGN-VVASYP 215 (651)
Q Consensus 173 ~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~-~~~~~P 215 (651)
.++|||+++++++.+++|.+++|+||+. .+++.|
T Consensus 143 ---------~sqpEt~av~~~~~~w~P~~~~dlHg~~~~~~~~P 177 (268)
T cd06244 143 ---------QTQPETQAIVALIAEWNPASFLDLHGYVEGFLIEP 177 (268)
T ss_pred ---------ccCHHHHHHHHHHHHhCCeEEEEeCCCCCceEEcC
Confidence 6899999999999999999999999987 555558
No 58
>cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling.
Probab=99.94 E-value=1.6e-27 Score=257.04 Aligned_cols=143 Identities=35% Similarity=0.606 Sum_probs=125.8
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI 347 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~ 347 (651)
..+|..+++...|. +| |||+|++|+||+++ .+...||+|+++||||||||+|++++++++++||++|.
T Consensus 16 ~~~p~~~~~~~iG~----S~-------EGR~i~~l~is~~~~~~~~~kp~v~i~~giHg~E~ig~~~~~~l~~~L~~~~~ 84 (395)
T cd03867 16 ARCSHIARTYSIGR----SF-------EGRDLLVIEFSSNPGQHELLEPEVKYIGNMHGNEVLGRELLIYLAQFLCSEYL 84 (395)
T ss_pred HhCCCceEEEEccc----cC-------CCceEEEEEeccCCCcccccCCeEEEEccccCCcHHHHHHHHHHHHHHHHhhh
Confidence 36788888888888 88 99999999999866 44557999999999999999999999999999999997
Q ss_pred cCChhhhhcccceeEEEEeccCcCCceeeeccc---ccCCCCCCCceeEeeccCCCCCCCC-------------------
Q psy8322 348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGN---CRSGRGRTPPFLISLFLPFPVTKNK------------------- 405 (651)
Q Consensus 348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~---~~~~kgr~~~~gvdlnrnf~~~~~~------------------- 405 (651)
.+|+++++||++++|||||++||||++++++++ +.||++|.|+.|||||||||+.+..
T Consensus 85 ~~d~~v~~ll~~~~i~ivP~~NPDG~e~~~~~~~~~~~wr~~R~n~~GvDLNRNf~~~~~~~~~~~~~~g~~~~~~p~p~ 164 (395)
T cd03867 85 LGNQRIQTLINTTRIHLLPSMNPDGYEAAASEGAGYNGWTNGRQNAQNIDLNRNFPDLTSEVYRRRRQRGARTDHIPIPD 164 (395)
T ss_pred cCCHHHHHHhhCcEEEEEeccCCchHHhhhhcCccccccccCCcCCCCcccccCCCcchhhhcchhhcccccccCCCCcc
Confidence 669999999999999999999999999999877 5799999999999999999975421
Q ss_pred ----CCCCCChHHHHHHHHHh
Q psy8322 406 ----PALTPDTDVFLHLASTY 422 (651)
Q Consensus 406 ----~~~~~~~~~f~~l~~~~ 422 (651)
..++||+++++.+..++
T Consensus 165 ~~~~~~sepEt~Av~~~~~~~ 185 (395)
T cd03867 165 SYWFGKVAPETKAVMKWMRSI 185 (395)
T ss_pred ccccCccCHHHHHHHHHHhhC
Confidence 12578899988887764
No 59
>cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at p
Probab=99.94 E-value=2.2e-27 Score=255.19 Aligned_cols=142 Identities=32% Similarity=0.528 Sum_probs=129.1
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI 347 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~ 347 (651)
+.+|..+++...|. ++ |||+|++|+||+++ .....||+|+++|+||||||+|++++++|+++||++|.
T Consensus 16 ~~~p~~~~l~~iG~----S~-------eGR~i~~l~is~~~~~~~~~kp~v~~~~~iH~~E~ig~~~~l~l~~~L~~~y~ 84 (372)
T cd03868 16 KKYPNIARLHSIGR----SV-------EGRELWVLRITDNVNRREPGEPMFKYVGNMHGDETVGRQVLIYLAQYLLENYG 84 (372)
T ss_pred HHCCCcEEEEeccc----cC-------CCceEEEEEEecCCCCCCCCCCeEEEECCcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 46788888888888 88 99999999999876 34567999999999999999999999999999999997
Q ss_pred cCChhhhhcccceeEEEEeccCcCCceeeeccc--ccCCCCCCCceeEeeccCCCCCCC-----CCCCCCChHHHHHHHH
Q psy8322 348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGN--CRSGRGRTPPFLISLFLPFPVTKN-----KPALTPDTDVFLHLAS 420 (651)
Q Consensus 348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~--~~~~kgr~~~~gvdlnrnf~~~~~-----~~~~~~~~~~f~~l~~ 420 (651)
. |+++++||++++|+|||++||||++++++++ ++|+++|.|+.|||||||||+.|. ...++||+.++..+..
T Consensus 85 ~-d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~~~~~~~R~n~~GvDLNRnf~~~~~~~~~~~~~sepEt~av~~~~~ 163 (372)
T cd03868 85 G-DERVTELVNTTDIYLMPSMNPDGFERSQEGDCSCGGYGGRENANNVDLNRNFPDQFEGKLQRLSERQPETVAMMKWIR 163 (372)
T ss_pred c-CHHHHHHHhCCEEEEEeeeCCchHHhhcccCccccCCCccCCCCCccCCCCCCcccCCcCCCCCCCCHHHHHHHHHHh
Confidence 5 9999999999999999999999999999998 789999999999999999998875 3568899999998887
Q ss_pred Hh
Q psy8322 421 TY 422 (651)
Q Consensus 421 ~~ 422 (651)
++
T Consensus 164 ~~ 165 (372)
T cd03868 164 SN 165 (372)
T ss_pred hC
Confidence 65
No 60
>cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active a
Probab=99.94 E-value=3e-27 Score=251.37 Aligned_cols=142 Identities=31% Similarity=0.530 Sum_probs=127.3
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI 347 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~ 347 (651)
..+|..+++...|. |+ |||+|++|+||+++ .+.++||+|+++|+||||||+|++++++++++||++|+
T Consensus 17 ~~~p~i~~l~~IG~----S~-------eGR~l~~l~Is~~~~~~~~~kp~v~~~~giHg~E~ig~e~~l~l~~~L~~~y~ 85 (363)
T cd06245 17 LNYPHITNLTSLGQ----SV-------EFRPILSLEISNKPNNSEPEEPKIRFVAGIHGNAPVGTELLLALAEFLCMNYG 85 (363)
T ss_pred HHCCCceEEEEeee----cC-------CCceEEEEEecCCCCCCCCCCCEEEEECCccCCcHHHHHHHHHHHHHHHHHcc
Confidence 36788888888888 88 99999999999876 45678999999999999999999999999999999997
Q ss_pred cCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCC--CCCCCCCCChHHHHHHHHHh
Q psy8322 348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVT--KNKPALTPDTDVFLHLASTY 422 (651)
Q Consensus 348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~--~~~~~~~~~~~~f~~l~~~~ 422 (651)
+ |+.+++||++++|||||++||||+++++++++.+..+|.|+.|||||||||++ +..+.++||+++++.+..+.
T Consensus 86 ~-d~~v~~ll~~~~i~ivP~~NPDG~e~~~~~~~~~~~~r~na~GvDLNRNf~~~~~g~~~~sepEt~Av~~~~~~~ 161 (363)
T cd06245 86 K-NPAVTKLIDRTRIVIVPSLNPDGREKAQEKQCTSKEGHTNAHGKDLDTDFTSNASNMSADVQPETKAIIDNLISK 161 (363)
T ss_pred C-CHHHHHHHhCCEEEEEeccCCchHHHeecCCCcccCCCCCcccccCCCCCCcccCCCCCCCcHHHHHHHHHHHhC
Confidence 6 89999999999999999999999999999997766789999999999999954 45667899999999887753
No 61
>cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the cont
Probab=99.94 E-value=3.1e-27 Score=252.73 Aligned_cols=141 Identities=34% Similarity=0.586 Sum_probs=126.2
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI 347 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~ 347 (651)
..+|...+++..|. ++ |||+|++|+||+++ .+...+|.|+++|+||||||+|++++++++++||++|.
T Consensus 20 ~~~p~i~~l~~IG~----S~-------eGR~i~~l~ig~~~~~~~~~~P~v~~~~~iHg~E~ig~~~~l~l~~~L~~~y~ 88 (376)
T cd03866 20 KNYPSITHLHSIGQ----SV-------EGRELWVLVLGRFPREHRIGIPEFKYVANMHGNEVVGRELLLHLIDYLVTSYG 88 (376)
T ss_pred HhCCCcEEEEEeec----cC-------CCceEEEEEeccCCccccCCCCeEEEEcccCCCcHHHHHHHHHHHHHHHHhcC
Confidence 36788888888888 88 99999999999865 34567999999999999999999999999999999997
Q ss_pred cCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCC--CCCCCChHHHHHHHHHh
Q psy8322 348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNK--PALTPDTDVFLHLASTY 422 (651)
Q Consensus 348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~--~~~~~~~~~f~~l~~~~ 422 (651)
+ |+++++||++++|||||++||||++++. .+|.|+++|.|+.|||||||||+.|.. ..++||.++++.+..+.
T Consensus 89 ~-d~~i~~lL~~~~i~ivP~~NPDG~e~~~-~~~~~~~~R~N~~GvDLNRnf~~~w~~~~~~sepEt~al~~~~~~~ 163 (376)
T cd03866 89 S-DPVITRLLNSTRIHIMPSMNPDGFEASK-PDCYYSVGRYNKNGYDLNRNFPDAFEENNEQRQPETRAVMEWLKSE 163 (376)
T ss_pred C-CHHHHHHHhCCEEEEEeccCCchhhhcc-cccccccccccCCCcccCcCchhhhccCCCCCcHHHHHHHHHHHhc
Confidence 7 8999999999999999999999999995 799999999999999999999987642 34789999988887654
No 62
>cd03857 Peptidase_M14-like_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.94 E-value=6.4e-26 Score=227.49 Aligned_cols=135 Identities=37% Similarity=0.500 Sum_probs=117.3
Q ss_pred eccccCCceEEEEEEcCCCC------CCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEE
Q psy8322 54 IGKSVLGKDLLVVNISTAPV------HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHL 127 (651)
Q Consensus 54 iG~S~egr~i~~v~i~~~~~------~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~i 127 (651)
||+|+|||||++++|++... ...+||.|++.||+||+|+.|+++++.|++.|+.+ +...+.+|++++|+|
T Consensus 1 iG~S~eGRpi~~~~i~~~~~~~~~~~~~~~k~~v~i~~giHg~E~~g~~a~~~l~~~l~~~----~~~~~~ll~~~~i~i 76 (226)
T cd03857 1 IGKSVEGRPLWMVTLTTAEGMKKRALAKEGKPRVWIDAQIHGNESAGSDALLELLRQLASA----SDEEAKMLENIVIVL 76 (226)
T ss_pred CccCCCCCeEEEEEEeCCccccccccccCCCcEEEEECCcCCCCchHHHHHHHHHHHHHhC----CHHHHHHHhCCEEEE
Confidence 69999999999999998542 23479999999999999999999999999999862 445689999999999
Q ss_pred EeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEec
Q psy8322 128 LPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHG 207 (651)
Q Consensus 128 iP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~ 207 (651)
||++||||+++.+ |.|++|+||||||+. .++||++++.+++.+++|.+++|+|+
T Consensus 77 vP~~NPDG~~~~~---------R~n~~g~DLNRd~~~-----------------~~~pEt~~~~~~~~~~~p~~~iDlH~ 130 (226)
T cd03857 77 IPRANPDGAALFT---------RENANGLDLNRDFLK-----------------LTQPETRAVREVFIEWKPQFFIDLHE 130 (226)
T ss_pred EeccCCChHHhcc---------ccCCCcccCCCCCCC-----------------cCCHHHHHHHHHHHHcCCeEEEEcCC
Confidence 9999999999864 899999999999983 68999999999999999999999999
Q ss_pred Cceeeeecccc
Q psy8322 208 GNVVASYPYDS 218 (651)
Q Consensus 208 ~~~~~~~P~~~ 218 (651)
+..-..++|..
T Consensus 131 ~~~g~~~~~~~ 141 (226)
T cd03857 131 YGFGAVSFYDP 141 (226)
T ss_pred CCCcceecCCC
Confidence 93223444443
No 63
>cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3.4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine pe
Probab=99.94 E-value=5.8e-27 Score=249.76 Aligned_cols=143 Identities=36% Similarity=0.598 Sum_probs=124.2
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI 347 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~ 347 (651)
..+|..+++...|. || |||+|++|+||+++ .+.++||.|+++|+||||||+|++++++++++||.+|.
T Consensus 20 ~~~p~i~~l~~IG~----S~-------eGR~I~~l~Is~~~~~~~~~kP~v~i~g~iHg~E~ig~~~~l~l~~~L~~~y~ 88 (402)
T cd03865 20 LQCPSISRIYTVGR----SF-------EGRELLVIEMSDNPGEHEPGEPEFKYIGNMHGNEAVGRELLIYLAQYLCNEYQ 88 (402)
T ss_pred HHCCCceEEEeccc----cc-------CCCeEEEEEeecCCCCCCCCCCEEEEECCcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 46788888888888 88 99999999999876 45668999999999999999999999999999999997
Q ss_pred cCChhhhhcccceeEEEEeccCcCCceeeecc---cccCCCCCCCceeEeeccCCCCCCC--------------------
Q psy8322 348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG---NCRSGRGRTPPFLISLFLPFPVTKN-------------------- 404 (651)
Q Consensus 348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~---~~~~~kgr~~~~gvdlnrnf~~~~~-------------------- 404 (651)
.+|+++++||++++|||||++||||++++.++ .+.|++||.|+.|||||||||....
T Consensus 89 ~~d~~v~~LLd~~~i~IvP~~NPDG~e~~~~~~~~~~~w~~~R~Na~GvDLNRNFp~~~~~~~~~~~~~~~~~~~~~~~~ 168 (402)
T cd03865 89 KGNETIINLIHSTRIHIMPSLNPDGFEKAASQPGELKDWFVGRSNAQGIDLNRNFPDLDRIVYVNEREGGPNNHLLKNMK 168 (402)
T ss_pred cCCHHHHHHHhcCEEEEEeeeCCchHHhhhhcCccccchhhhcccccCcccCCCCCcccchhhhhhccCCCccccccccc
Confidence 66899999999999999999999999998652 3679999999999999999995310
Q ss_pred -----CCCCCCChHHHHHHHHHh
Q psy8322 405 -----KPALTPDTDVFLHLASTY 422 (651)
Q Consensus 405 -----~~~~~~~~~~f~~l~~~~ 422 (651)
.....||+.+++....++
T Consensus 169 ~~~~~~~~~~pEt~Avm~w~~~~ 191 (402)
T cd03865 169 KAVDENTKLAPETKAVIHWIMDI 191 (402)
T ss_pred cccccccCCChHHHHHHHHHHhC
Confidence 113468888888877766
No 64
>cd03859 M14_CPT Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor.
Probab=99.94 E-value=1.8e-26 Score=240.61 Aligned_cols=217 Identities=24% Similarity=0.321 Sum_probs=175.5
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR 348 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~ 348 (651)
+.+|..++++..|. ++ |||+|++|+|++++.....||.|+++|++|||||+|++++++++++||.+|..
T Consensus 19 ~~~p~~v~~~~iG~----S~-------eGR~i~~l~i~~~~~~~~~kp~i~i~~~iH~~E~~g~~~~l~~i~~L~~~~~~ 87 (295)
T cd03859 19 AAYPNLTKVKSIGK----SY-------EGRDIIAVKISDNVATDENKPEVLYTSTHHAREWLSLEMAIYLMHYLLENYGK 87 (295)
T ss_pred HHCCCceEEEeeee----cC-------CCCeEEEEEEecCCCCCCCCCEEEEECCcCccchhhHHHHHHHHHHHHHhhcc
Confidence 46788888888888 88 99999999999876445679999999999999999999999999999999977
Q ss_pred CChhhhhcccceeEEEEeccCcCCceeeec--ccccCCCCCC-------CceeEeeccCCCCCCCC--------------
Q psy8322 349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVE--GNCRSGRGRT-------PPFLISLFLPFPVTKNK-------------- 405 (651)
Q Consensus 349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~--~~~~~~kgr~-------~~~gvdlnrnf~~~~~~-------------- 405 (651)
|+.+++||++++|+|||++||||++++++ .++.|||+|. ++.|||||||||+.|..
T Consensus 88 -d~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~~~~~wrkn~~~~~~~~~~~~GvDLNRNf~~~w~~~~~g~s~~p~~~~y 166 (295)
T cd03859 88 -DPRIQNLVDNRELWFVPVVNPDGYEYDETTGGYRSWRKNRRDNSGDISSSDGVDLNRNYGYKWGYDSGGSSNDPSSETY 166 (295)
T ss_pred -CHHHHHHHhcCeEEEEeeeCCCcceEEeeccCccceeccCCCCCCCcCcceeecCCCCCCcccCCCCCCCCCCCCCCCc
Confidence 89999999999999999999999999998 8999999974 56899999999976542
Q ss_pred ----CCCCCChHHHHHHHHHhh--ccCCCCcCC--------CC-------CCCC---------cc--ccccCcceeccce
Q psy8322 406 ----PALTPDTDVFLHLASTYA--RLHPTMHMK--------RP-------CPGN---------TV--LKFENGVTNGAAW 453 (651)
Q Consensus 406 ----~~~~~~~~~f~~l~~~~a--~~~~~~~~~--------~~-------~~~~---------~~--~~~~~gi~n~~~~ 453 (651)
+.++||+++++.+..++. .....+|.. +. +.+. .. ..+..|. ...|
T Consensus 167 ~G~~p~sepEt~av~~~~~~~~~~~~~l~~Hs~g~~i~~P~~~~~~~~~~~~d~~~~~~la~~~~~~~~y~~~~--~~~~ 244 (295)
T cd03859 167 RGPSAFSEPETQAIRDFVESHKNIKTALNYHTYSNLWLYPYGYQYNEPMPSKDEIDFVALGGTMAESNGYTPKV--SSDL 244 (295)
T ss_pred cCCCCCchHHHHHHHHHHHhCCCeEEEEEeecCCceEEeCCcCCCCCCCCCccHHHHHHHHHHHHHHhCCcccC--ccee
Confidence 456789999999888762 111111110 00 1110 00 0122333 3458
Q ss_pred EeccCcccchhhhccceeEEEEEecc-----cCCCCCCCcchhhhhchHHH
Q psy8322 454 YSFSGGMADYNYLYHGCLELTLEISC-----CRYPAPSEIPIHWRSNQNAL 499 (651)
Q Consensus 454 y~~sG~~~D~~y~~~~~~~~T~El~~-----~~~p~~~~i~~~w~~nr~al 499 (651)
|+++|+++||+|...++++||+||++ +++||.++|.++|++|++++
T Consensus 245 Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~~~gf~~p~~~i~~~~~~~~~~~ 295 (295)
T cd03859 245 YTANGDADDWMYGRHKIISLTPEMGPESGGTGFYPPDEEISRETSRNYPAL 295 (295)
T ss_pred EecCCchHHHHhhCCCcEEEEEEeCCCCCCCCCcCCHHHHHHHHHhccCCC
Confidence 99999999999999889999999998 34799999999999998753
No 65
>cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappr
Probab=99.93 E-value=3.4e-26 Score=246.79 Aligned_cols=143 Identities=39% Similarity=0.629 Sum_probs=129.5
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCc-cCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPV-HQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI 347 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~-~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~ 347 (651)
..+|..++++..|. ++ |||+|++|+|++++. ....||.|+++|++|||||+|++++++|+++|+.+|.
T Consensus 16 ~~~p~~~~~~~iG~----S~-------eGR~i~~l~i~~~~~~~~~~kp~v~i~agiH~~E~~g~~~~~~l~~~L~~~~~ 84 (374)
T cd03858 16 ANYPNITRLYSIGK----SV-------QGRDLWVLEISDNPGVHEPGEPEFKYVGNMHGNEVVGRELLLRLAQYLCENYG 84 (374)
T ss_pred HhCCCceEEEEccc----CC-------CCCEEEEEEEecCCCCCCCCCceEEEeccccCCchhHHHHHHHHHHHHHHHhc
Confidence 46788888888888 88 999999999998763 3457999999999999999999999999999999997
Q ss_pred cCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCC-------CCCCCCChHHHHHHHH
Q psy8322 348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKN-------KPALTPDTDVFLHLAS 420 (651)
Q Consensus 348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~-------~~~~~~~~~~f~~l~~ 420 (651)
..|+.+++||++++|+|||++||||+++.++++|.|+++|.|+.|||||||||+.|. .+.++||.+++..+..
T Consensus 85 ~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~w~~~R~n~~GvDLNRnf~~~~~~~~~~G~~~~sepEt~al~~~~~ 164 (374)
T cd03858 85 AGDPRITRLVDNTRIHIMPSMNPDGYEKAAEGDCGGLTGRYNANGVDLNRNFPDLFFTNYRSSDNGPRQPETKAVMNWIK 164 (374)
T ss_pred cCCHHHHHHHhCCEEEEEcccCCchhhhhcccCCcccccCCCCcceecccCCCcccccccccCCCcccCHHHHHHHHHHh
Confidence 458999999999999999999999999999999999999999999999999998764 3468999999998887
Q ss_pred Hh
Q psy8322 421 TY 422 (651)
Q Consensus 421 ~~ 422 (651)
++
T Consensus 165 ~~ 166 (374)
T cd03858 165 SI 166 (374)
T ss_pred hC
Confidence 65
No 66
>cd06906 M14_Nna1 Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the mouse Nna1/CCP-1, and -4 proteins, and the human Nna1/AGTPBP-1 protein. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. Mutations in Nna
Probab=99.93 E-value=7.3e-25 Score=220.80 Aligned_cols=217 Identities=17% Similarity=0.266 Sum_probs=156.6
Q ss_pred HHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCC--------CCCCCeEEEEecccCCChhHHHHHHHHHHHHHHH
Q psy8322 37 ELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVH--------QLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVE 108 (651)
Q Consensus 37 ~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~--------~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~ 108 (651)
.|+......+.+++...+++|.+||++++|+|++.+.. ...||.|||.|++|++|..|..++..+++.|+.
T Consensus 3 ~l~~~~~~~~~y~~~~~Lc~Tl~G~~v~lltIt~~~~~~~~~~~~~~~~kp~I~I~ARvHPgEt~~Swi~~g~l~~L~~- 81 (278)
T cd06906 3 KLESLHDPQQIYFRQQVLCETLGGNSCPLLTITAMPESNYYEHICQFRNRPYIFLSARVHPGETNASWVMKGTLEFLMS- 81 (278)
T ss_pred hHhhhcCCcccEEeeecceeccCCCceeEEEEeCCCccccccccccccCCcEEEEEcccCCCcchHHHHHHHHHHHHhC-
Confidence 34455555567889999999999999999999985421 147999999999999999999999999998874
Q ss_pred hccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHH--
Q psy8322 109 YIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPE-- 186 (651)
Q Consensus 109 ~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepE-- 186 (651)
.|+.++.|+++++|+||||+||||+.+.+ .|.|..|+||||||.. +.|-..||
T Consensus 82 ---~d~~a~~Lr~~~~f~IvPmlNPDGvv~Gn--------~Rc~~~G~DLNR~w~~--------------p~~~~~P~i~ 136 (278)
T cd06906 82 ---SSPTAQSLRESYIFKIVPMLNPDGVINGN--------HRCSLSGEDLNRQWQS--------------PNPELHPTIY 136 (278)
T ss_pred ---CCHHHHHHHHhCcEEEEeeecCccceecc--------cccCCCCCCCCCCCCC--------------CCcccChHHH
Confidence 58999999999999999999999999765 6888899999999972 34455565
Q ss_pred -HHHHHHHHHhC--CcEEEEEEecCcee-eeeccccccCCCCCC---------CCchhhhhhhhHHHHhhcccCCccccc
Q psy8322 187 -VQAVIDWMNSV--PFVMSLQLHGGNVV-ASYPYDSFYGESKNN---------INNHDLNRQFPDYFRHNRSNIPTLVST 253 (651)
Q Consensus 187 -t~al~~~~~~~--~~~~~i~~H~~~~~-~~~P~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (651)
+++|.+++.+. .+.+++|+||++.. -.|=||......+.. .......+.+|++...+.. .+.+.+.
T Consensus 137 ~~k~l~~~l~~~~~~~~~yiDlHghs~~~~~F~yG~~~~~~~~~~~~~~~~~~~~~~~~~~~fP~ll~~~~~-~Fs~~~C 215 (278)
T cd06906 137 HTKGLLQYLAAIKRSPLVYCDYHGHSRKKNVFMYGCSIKETVWHTNVNSASCDLVEDSGYRTLPKILSHIAP-AFSMSSC 215 (278)
T ss_pred HHHHHHHHHHHhCCCceEEEeecccccccceEEeccCCCcchhhhhccccccccchhhhHHHHHHHHHhcCC-ccchhhC
Confidence 66666777654 58899999987764 334444432221100 0011234567777766543 2322222
Q ss_pred ---cccccccchhhhccc-CCCCeEEEEEee
Q psy8322 254 ---SQSIDPEVQAVIDWM-NSVPFVMSLQLH 280 (651)
Q Consensus 254 ---~~~~~~~~g~~~dw~-~~~p~~~t~el~ 280 (651)
.+.-...|+.+.=|- .+++++||+|.-
T Consensus 216 ~F~~~k~K~gTaRv~~~~~~~i~~syTlE~S 246 (278)
T cd06906 216 SFVVEKSKESTARVVVWREIGVQRSYTMEST 246 (278)
T ss_pred CccCCCCCCCCeeEehhhhcCCceEEEEEEE
Confidence 233445567777777 488988888863
No 67
>cd06226 M14_CPT_like Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase (CP) T (CPT)-like proteins. This group belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues and C-terminal positively charged residues. However, CPT does not belong to this CPT-like group.
Probab=99.93 E-value=1e-25 Score=232.75 Aligned_cols=221 Identities=24% Similarity=0.336 Sum_probs=170.4
Q ss_pred CeEEEEEeeCceecccC--CCcccCCCCcceEEEEeeCCCc--cCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322 272 PFVMSLQLHGGNVVASY--PYDSFYGESKDLLVVNISTAPV--HQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI 347 (651)
Q Consensus 272 p~~~t~el~g~~l~~~y--~~~~~~gegr~i~~l~is~~~~--~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~ 347 (651)
|..+++...|. +| +--. |||+|++|+|+++.. ....||.|+++|+||||||+|++++++++++|+.+|.
T Consensus 2 p~~~~~~~iG~----S~~~~~~~---eGR~I~~l~ig~~~~~~~~~~kp~v~i~~~iHarE~ig~~~~l~~i~~L~~~~~ 74 (293)
T cd06226 2 PNLAQWVDIGD----SWDKPGGP---AGYDIRALKLTNKATNSPTGPKPVFFIMGAIHAREYTTAELVLRFAEDLLEGYG 74 (293)
T ss_pred CcceEEEEeeE----ecccCccc---CCceEEEEEEecCCCCcCCCCCCEEEEECCcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 45556666665 44 0011 899999999998763 3568999999999999999999999999999999997
Q ss_pred cCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC---------ceeEeeccCCCCCCC--------------
Q psy8322 348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP---------PFLISLFLPFPVTKN-------------- 404 (651)
Q Consensus 348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~---------~~gvdlnrnf~~~~~-------------- 404 (651)
. |+++++||++++|+|||++||||+++++. +++|||+|.+ ..|||||||||+.|.
T Consensus 75 ~-d~~v~~lL~~~~i~ivP~~NPDG~~~~~~-~~~wRkNr~~~~~~~~~~n~~GVDLNRNf~~~w~~~~~~~~~p~~~~y 152 (293)
T cd06226 75 T-DADATWLLDYHEIHVVPIVNPDGRKIAEQ-GLSQRKNANTSGGSNCSGSSYGVDLNRNYSFGWGGAGASSGDPCSETY 152 (293)
T ss_pred c-CHHHHHHHhcCeEEEEecccCCcceeecc-CcceeccCCCCCCCCccccccccccccCCCCcCCcCCCCCCCCCCCCc
Confidence 6 89999999999999999999999999876 7899999853 479999999997653
Q ss_pred ---CCCCCCChHHHHHHHHHhhcc-----------------CCCCcCCC-----C-------CCCCc-----cccc--cC
Q psy8322 405 ---KPALTPDTDVFLHLASTYARL-----------------HPTMHMKR-----P-------CPGNT-----VLKF--EN 445 (651)
Q Consensus 405 ---~~~~~~~~~~f~~l~~~~a~~-----------------~~~~~~~~-----~-------~~~~~-----~~~~--~~ 445 (651)
.+.++||+++++.+..+.... ...+|... + +++.. ...+ ..
T Consensus 153 ~G~~p~SEpEt~Av~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~HS~g~~i~~P~g~~~~~~p~~~~~~~la~~~~~~~ 232 (293)
T cd06226 153 RGPAPGSEPETAALEDYIRGLFPDQRGPGDTDPAPDDTTGVYLDIHSYSNLVLYPWGWTTQPAPNDTQLRALGRKFASFN 232 (293)
T ss_pred CCCCCCCcHHHHHHHHHHHhccccccccccccccccccceEEEEeccCCCeEeecCcCCCCCCCCHHHHHHHHHHHhhcC
Confidence 346789999999888765311 12222211 1 11000 0000 11
Q ss_pred c--ceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCc-chhhhhchHHHHH
Q psy8322 446 G--VTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEI-PIHWRSNQNALIS 501 (651)
Q Consensus 446 g--i~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i-~~~w~~nr~all~ 501 (651)
| ..+...||+++|+++||+|...+++++||||+|++||+.+++ +.+|.+||++|+.
T Consensus 233 gy~~~~~~~~Y~~~G~~~Dw~y~~~gi~s~TiElg~~~~~~~~~~~~~~~~~n~~~~~~ 291 (293)
T cd06226 233 GYTPQQSVGLYPTDGTTDDWSYGELGVAAYTFEIGTSFFQSCSSFESGILPDNRPALYY 291 (293)
T ss_pred CccccccceEEecCCChhHhHhhcCCceEEEEEccCCCCCCcccccccccccCHHHHhh
Confidence 1 133555899999999999998888999999999999988766 6999999999874
No 68
>cd06240 Peptidase_M14-like_1_3 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T
Probab=99.93 E-value=2e-25 Score=226.95 Aligned_cols=140 Identities=25% Similarity=0.307 Sum_probs=119.5
Q ss_pred EEEEeccccCCceEEEEEEcCCCC----------------------------CCCCCCeEEEEecccCCChhHHHHHHHH
Q psy8322 50 ELYSIGKSVLGKDLLVVNISTAPV----------------------------HQLGVPNVKIVGNIHGDEPIGREIILRL 101 (651)
Q Consensus 50 ~~~~iG~S~egr~i~~v~i~~~~~----------------------------~~~~k~~v~i~~~iHg~E~~g~~~~l~~ 101 (651)
+++++|+|+|||+|+++.|++... ...+||.|||.++|||+||+|+++++++
T Consensus 1 ~l~~iGkS~EGR~l~~~~Iss~~n~~~ld~~~~~~~~la~~~~~~~~~a~~~~~~~kp~v~i~~~iHg~E~~g~ea~l~l 80 (273)
T cd06240 1 KLVEIGKTEEGRPQIMAAISSPENLAKLDHYKAILRKLADPRGLTEEQARALIAEGKPIVWIDGGLHSTETGGPQMLMEL 80 (273)
T ss_pred CeeEeecCCCCCeEEEEEeeChhHhhhHHHHHHHHhhhhccccccchhhhhhhccCCCEEEEECCcCCCchHHHHHHHHH
Confidence 478999999999999999997432 1246999999999999999999999999
Q ss_pred HHHHHHHhccCChhHHHhhcCceEEEEeccCccccccccccccc----C-------CCCCCCccCcCCCCCCCcccCCCC
Q psy8322 102 LEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCR----S-------GRGRNNINNHDLNRQFPDYFRHNR 170 (651)
Q Consensus 102 ~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~----~-------~~~r~n~~GvDLNRnf~~~w~~~~ 170 (651)
+++|+. +.|++++++|++++|+|+|++||||+++...-.++ . ...+.+..|+||||+|-
T Consensus 81 ~~~L~~---~~d~~~~~lLd~~~i~i~P~~NPDG~er~~~w~~~~~~~~~~~~~~~~~~~~~y~g~DlNRD~~------- 150 (273)
T cd06240 81 AYRLAT---EEDPEIKRILDNVIVLIVPVANPDGRDRVVDWYMRTLGPPKRDRSPLPPLYGKYVGHDNNRDGY------- 150 (273)
T ss_pred HHHHHh---cCCHHHHHHHhcCEEEEEeCcCCCHHHHhhhhhhhccCCcccCCCCcccccCccCCcCCCcccc-------
Confidence 999997 56899999999999999999999999985421111 0 11256788999999996
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCc
Q psy8322 171 SNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGN 209 (651)
Q Consensus 171 s~~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~ 209 (651)
..+.||++++.+++.++.|.+++|+|..+
T Consensus 151 ----------~~~~~et~~~~~~~~~w~P~v~~D~He~g 179 (273)
T cd06240 151 ----------MNQQETTNNSRKLFLEWHPQIMYDLHQSG 179 (273)
T ss_pred ----------hhcCHHHHHHHHHHHhcCCcEEEEcccCC
Confidence 37899999999999999999999999763
No 69
>cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3.4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates inclu
Probab=99.92 E-value=1.9e-25 Score=239.07 Aligned_cols=143 Identities=35% Similarity=0.608 Sum_probs=123.1
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI 347 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~ 347 (651)
+.+|...++...|. |+ |||+|++|+||+++ .+...||+|+++|+||||||+|++++++++++||++|.
T Consensus 16 ~~yP~i~~l~sIG~----Sv-------eGR~i~~l~is~~~~~~~~~kp~v~~~g~iHg~E~ig~e~ll~l~~~L~~~y~ 84 (392)
T cd03864 16 NECPYITRIYSIGR----SV-------EGRHLYVLEFSDNPGIHEPLEPEFKYVGNMHGNEVLGRELLIQLSEFLCEEYR 84 (392)
T ss_pred HHCCCeEEEEEeee----cc-------CCceEEEEEecCCCccccCCCCEEEEEcccCCCcHHHHHHHHHHHHHHHHhcc
Confidence 36677777777787 77 99999999999977 45667999999999999999999999999999999997
Q ss_pred cCChhhhhcccceeEEEEeccCcCCceeeeccccc---CCCCCCCceeEeeccCCCCCCC--------------------
Q psy8322 348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCR---SGRGRTPPFLISLFLPFPVTKN-------------------- 404 (651)
Q Consensus 348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~---~~kgr~~~~gvdlnrnf~~~~~-------------------- 404 (651)
.+|+++++||++++|||||++||||+++++++++. |..+|.|+.|||||||||..+.
T Consensus 85 ~~d~~v~~lL~~~~i~ivP~~NPDG~e~~~~~~~~~~~~~~~R~Na~GVDLNRNFp~~~~~~~~~~~~~g~~~~~P~~~~ 164 (392)
T cd03864 85 NGNERITRLIQDTRIHILPSMNPDGYEVAARQGPEFNGYLVGRNNANGVDLNRNFPDLNTLMYYNEKYGGPNHHLPLPDN 164 (392)
T ss_pred cCCHHHHHHHhcCeEEEEeeeCCchHHhhhccCCCcCccccccccccCcccccCCCcccccchhhhccCCccccCCCccc
Confidence 66899999999999999999999999999876544 3468999999999999994310
Q ss_pred -CCCCCCChHHHHHHHHHh
Q psy8322 405 -KPALTPDTDVFLHLASTY 422 (651)
Q Consensus 405 -~~~~~~~~~~f~~l~~~~ 422 (651)
....+||+.++..+..++
T Consensus 165 ~~~~~epET~Av~~~~~~~ 183 (392)
T cd03864 165 WKSQVEPETLAVIQWMQNY 183 (392)
T ss_pred cccccCHHHHHHHHHHHhc
Confidence 134688999888888765
No 70
>cd06904 M14_MpaA_like Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A (MpaA) and related proteins. MpaA is a member of the M14 family of metallocarboxypeptidases (MCPs), however it has an exceptional type of activity, it hydrolyzes the gamma-D-glutamyl-meso-diaminopimelic acid (gamma-D-Glu-Dap) bond in murein peptides. MpaA is specific for cleavage of the gamma-D-Glu-Dap bond of free murein tripeptide; it may also cleave murein tetrapeptide. MpaA has a different substrate specificity and cellular role than endopeptidase I, ENP1 (ENP1 does not belong to this group). MpaA works on free murein peptide in the recycling pathway.
Probab=99.91 E-value=1.1e-24 Score=210.64 Aligned_cols=159 Identities=26% Similarity=0.304 Sum_probs=123.2
Q ss_pred EEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCC
Q psy8322 81 VKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNR 160 (651)
Q Consensus 81 v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNR 160 (651)
|+|+||+||+|++|.+++++|++.|+.. .|++.+|+|||++||||+++.+ |.|+.||||||
T Consensus 1 vli~agiHG~E~~g~~~~~~l~~~l~~~----------~l~~~~i~ivP~~NPdG~~~~~---------R~n~~gvDLNR 61 (178)
T cd06904 1 VLIIGGIHGDEPASVSDLEELLRILPGL----------ILRGLSWYVIPVLNPDGLLRAT---------RCNANGVDLNR 61 (178)
T ss_pred CEEEeccCCCCHHHHHHHHHHHHHHHHH----------hhcCCeEEEEeCcCccHHhhCc---------ccCCCCcChhh
Confidence 5899999999999999999999999863 2788999999999999999754 77889999999
Q ss_pred CCCcccCCCCCCC-CCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHH
Q psy8322 161 QFPDYFRHNRSNI-PTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDY 239 (651)
Q Consensus 161 nf~~~w~~~~s~~-p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~ 239 (651)
|||..|...+++. +.|+|+.++||||++++.+++.+.++.++||+|++...+.++. +. +.+
T Consensus 62 nFp~~~~~~~~~~~~~~~G~~~~sepEt~al~~~~~~~~~~~~idlHs~~~~~~~~~-------------~~--~~l--- 123 (178)
T cd06904 62 NFPTKDWPPGASRYRRYPGPKPGSEPESRALMDLIERFKPDVVVSFHAPLGVLDGDG-------------PN--EPL--- 123 (178)
T ss_pred cCCccccccCCCcccccCCCCCCCCHHHHHHHHHHHhcCCeEEEEeCCCCCeecCCC-------------ch--hHH---
Confidence 9999998765443 4599999999999999999999999999999999866544321 00 111
Q ss_pred HHhhcccCCccccccccccccchhhhcccC---CCCeEEEEEeeCc
Q psy8322 240 FRHNRSNIPTLVSTSQSIDPEVQAVIDWMN---SVPFVMSLQLHGG 282 (651)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~g~~~dw~~---~~p~~~t~el~g~ 282 (651)
++...... ....-++..|+..+|+. ++| ++++|+.++
T Consensus 124 a~~~g~~~-----~~~~~~~~~G~~~~~a~~~~gip-~it~Elg~~ 163 (178)
T cd06904 124 ARKFGYLG-----FDDLGYPTPGSLGSWAGVERNIP-VITIELPYN 163 (178)
T ss_pred HHHhCCCc-----cccCCccCCCcHHHHHhhcCCCe-EEEEEcCCc
Confidence 11111111 11222456788899993 555 788888876
No 71
>cd03862 Peptidase_M14-like_7 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=99.91 E-value=3.7e-24 Score=218.68 Aligned_cols=171 Identities=24% Similarity=0.341 Sum_probs=129.5
Q ss_pred CCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCce
Q psy8322 295 GESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE 374 (651)
Q Consensus 295 gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~ 374 (651)
|...+|++|+|++.. ..+|.|+++||+||+||+|++++++++++|+.+|.. |+.++.+|++++|+|||++||||
T Consensus 7 ~~~~pi~~v~ig~~~---~~~p~v~i~~giHg~E~ig~~~~l~~l~~L~~~~~~-d~~~~~ll~~~~i~ivP~vNPdG-- 80 (273)
T cd03862 7 GLRFPIYALELGSPD---PKAPVLGLVGGVHGLERIGTQVLLAFLESLLERLRW-DKLLQELLEKVRLVFLPLVNPVG-- 80 (273)
T ss_pred CCcceeEEEEecCCC---CCCCEEEEEcCcCCCcHHHHHHHHHHHHHHHHhccc-cHHHHHHHhCCeEEEEeccCcCH--
Confidence 357899999998643 468999999999999999999999999999999976 89999999999999999999999
Q ss_pred eeecccccCCCCCCCceeEeeccCCCCCCC---------------------C--CCCCCChHHHHHHHHHhh--------
Q psy8322 375 LAVEGNCRSGRGRTPPFLISLFLPFPVTKN---------------------K--PALTPDTDVFLHLASTYA-------- 423 (651)
Q Consensus 375 ~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~---------------------~--~~~~~~~~~f~~l~~~~a-------- 423 (651)
+|+++|.|..|||||||||+.+. . ..++||++++..+..++.
T Consensus 81 -------~~~~~R~n~~GVDLNRNfp~~~~~~~~~~~~G~~~~p~~~~Y~G~~~~~sEpEt~al~~~~~~~~~~~~~~~~ 153 (273)
T cd03862 81 -------MALKTRSNGNGVDLMRNAPVDAEDKPPFLVGGQRLSPRLPWYRGKNGAGMELEAQALCRFVRELLFESPFSIA 153 (273)
T ss_pred -------HHhcccCCCCCcccCCCCCCCccccccccccCccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCeEEE
Confidence 46788999999999999996632 1 468888999988887651
Q ss_pred -ccCCCCc--C---------CCC-CCCC--------c-----cccccCcceeccceEeccCcccchhhhcc-------ce
Q psy8322 424 -RLHPTMH--M---------KRP-CPGN--------T-----VLKFENGVTNGAAWYSFSGGMADYNYLYH-------GC 470 (651)
Q Consensus 424 -~~~~~~~--~---------~~~-~~~~--------~-----~~~~~~gi~n~~~~y~~sG~~~D~~y~~~-------~~ 470 (651)
+-|-+++ . ... +... . ...+..| .....|+++|++.||+|... ..
T Consensus 154 ld~HSg~G~~~~i~~Pyg~~~~~~~~~~~~~~l~~~~~~~~~~~~Y~~g--~~s~~Y~a~G~~~D~~y~~~~~~~~~~~~ 231 (273)
T cd03862 154 LDCHSGFGLVDRIWFPYAYTKEPIPHLAEIYALKELLERTYPNHVYRFE--PQSRHYLTHGDLWDYLYDQHQKQQPNGRF 231 (273)
T ss_pred EEECCCCCccCEEEcCCcCCCCCCCCHHHHHHHHHHHHHhCCCCceEEC--CcceeEECCCCHHHHHHhhcCcccccccc
Confidence 3333322 0 001 1100 0 0011111 12225999999999999753 34
Q ss_pred eEEEEEeccc
Q psy8322 471 LELTLEISCC 480 (651)
Q Consensus 471 ~~~T~El~~~ 480 (651)
+.+|+|++..
T Consensus 232 l~~TlE~Gt~ 241 (273)
T cd03862 232 LPLTLEMGSW 241 (273)
T ss_pred eeEEEEeecc
Confidence 7999999865
No 72
>cd06237 M14_Nna1_like_3 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP),-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.
Probab=99.91 E-value=3.7e-24 Score=215.85 Aligned_cols=173 Identities=18% Similarity=0.218 Sum_probs=127.4
Q ss_pred EEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhh
Q psy8322 274 VMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNI 353 (651)
Q Consensus 274 ~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v 353 (651)
.++....|. ++ |||+|++|+|++++ .||.|++.|++||+||+|++++++++++|+.+ ++.+
T Consensus 25 ~v~~~~iG~----S~-------eGR~i~~l~ig~~~----~k~~v~i~~~iH~~E~~g~~~~~~~~~~l~~~----~~~~ 85 (244)
T cd06237 25 FVELELLGL----ST-------QGRPLKALERGNPD----SKEWIVVISRQHPPEVTGALAMKAFIETLLSD----SELA 85 (244)
T ss_pred CeEEEEeeE----cC-------CCCEEEEEEecCCC----CCceEEEEcCcCCCcHHHHHHHHHHHHHHHhC----CHHH
Confidence 367777777 78 99999999998654 68999999999999999999999999999962 4557
Q ss_pred hhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHhhc------cCC
Q psy8322 354 RFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYAR------LHP 427 (651)
Q Consensus 354 ~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~a~------~~~ 427 (651)
++||++++|+|||++||||+++.. | |.|+.|+||||||+. .++||+.++..+..+... .+.
T Consensus 86 ~~ll~~~~i~ivP~~NPDG~~~~~-----w---R~N~~GvDLNRnw~~-----~sepEt~a~~~~~~~~~~~~~~~~~~i 152 (244)
T cd06237 86 KKFRAKYNVLLVPNMNPDGVDLGH-----W---RHNANGIDLNRDWSN-----FNQPETRAIRDYLVRLVKEGGKIVFAL 152 (244)
T ss_pred HHHHHhCEEEEEEeeCcchhhcCC-----c---cCCCCCcCCCCCCCC-----CCCHHHHHHHHHHHHHhccCCCEEEEE
Confidence 899999999999999999999742 5 455579999999963 468999988887664310 011
Q ss_pred CCcCC---------CCCCCC--------------ccccccCcceeccceEeccCcccchhhhccceeEEEEEeccc
Q psy8322 428 TMHMK---------RPCPGN--------------TVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCC 480 (651)
Q Consensus 428 ~~~~~---------~~~~~~--------------~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~ 480 (651)
.+|.. ..+... ....|..+ +...-|+++|+++||.|...++++||+||+..
T Consensus 153 d~Hs~~~~i~~~~~~~~~~~~p~~~~~~~~~l~~~~~~Y~~~--~~~~~~~~~g~~~Dw~~~~~~~~~~T~E~g~~ 226 (244)
T cd06237 153 DFHSTWHDVFYTMPEDYKLQFPGFVADWLKELDKRILDYKVN--NRSGSSPDRGVSKQYFADEHGAHAITYEVGDN 226 (244)
T ss_pred EeccCCcceEecCCCCCCcccchHHHHHHHHhcCcCCCceec--cccCcccCCCcHHHHHHHhCCCcEEEEecCCC
Confidence 11110 001100 00111111 22223688999999999988888999999743
No 73
>KOG2649|consensus
Probab=99.90 E-value=5.3e-24 Score=223.57 Aligned_cols=104 Identities=44% Similarity=0.777 Sum_probs=101.9
Q ss_pred CCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCce
Q psy8322 296 ESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE 374 (651)
Q Consensus 296 egr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~ 374 (651)
|||+||+++||+.| .|..++|++.++|+|||+|.+|+|++++++++||.+| .+|++|++||++++|||||++||||||
T Consensus 100 ~Gr~L~Vle~sd~PgeH~~gePEfKyv~nmHGnE~vGRElll~L~e~Lc~~y-~~n~~i~~Lv~~trIHlmPSmNPDGyE 178 (500)
T KOG2649|consen 100 EGRELWVIEISDRPGEHEPGEPEFKYIGNMHGNEVVGRELLLRLAEYLCDNY-GKDPRITQLVNNTRIHIMPSMNPDGYE 178 (500)
T ss_pred cCceEEEEEcCCCCCcccCCCCcceeeeeccccccccHHHHHHHHHHHHHhc-CCChHHHHHHhhceEEEecccCcchhh
Confidence 99999999999999 7899999999999999999999999999999999999 559999999999999999999999999
Q ss_pred eeecccccCCCCCCCceeEeeccCCC
Q psy8322 375 LAVEGNCRSGRGRTPPFLISLFLPFP 400 (651)
Q Consensus 375 ~~~~~~~~~~kgr~~~~gvdlnrnf~ 400 (651)
++.+++|-|.-||.|+.|+|||||||
T Consensus 179 ~a~~~~~~~~~GR~Nang~DLNrnFP 204 (500)
T KOG2649|consen 179 IAKRGDRGWATGRNNANGVDLNRNFP 204 (500)
T ss_pred hhhcccccceecccCccccchhccCc
Confidence 99999999999999999999999998
No 74
>PF00246 Peptidase_M14: Zinc carboxypeptidase This is family M14 in the peptidase classification. ; InterPro: IPR000834 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of sequences contain a diverse range of gene families, which include metallopeptidases belonging to MEROPS peptidase family M14 (carboxypeptidase A, clan MC), subfamilies M14A and M14B. The carboxypeptidase A family can be divided into two subfamilies: carboxypeptidase H (regulatory) and carboxypeptidase A (digestive) []. Members of the H family have longer C-termini than those of family A [], and carboxypeptidase M (a member of the H family) is bound to the membrane by a glycosylphosphatidylinositol anchor, unlike the majority of the M14 family, which are soluble []. The zinc ligands have been determined as two histidines and a glutamate, and the catalytic residue has been identified as a C-terminal glutamate, but these do not form the characteristic metalloprotease HEXXH motif [, ]. Members of the carboxypeptidase A family are synthesised as inactive molecules with propeptides that must be cleaved to activate the enzyme. Structural studies of carboxypeptidases A and B reveal the propeptide to exist as a globular domain, followed by an extended alpha-helix; this shields the catalytic site, without specifically binding to it, while the substrate-binding site is blocked by making specific contacts [, ]. Other examples of protein families in this entry include: Intron maturase Putative mitochondrial processing peptidase alpha subunit Superoxide dismutase [Mn] (1.15.1.1 from EC) Asparagine synthetase [glutamine-hydrolysing] 3 (6.3.5.4 from EC) Glucose-6-phosphate isomerase (5.3.1.9 from EC) ; GO: 0004181 metallocarboxypeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 3DGV_A 3OSL_C 3D4U_A 2NSM_A 1QMU_A 1H8L_A 2PJ2_A 2PJ9_A 1ZG8_A 1Z5R_A ....
Probab=99.89 E-value=6.4e-24 Score=220.78 Aligned_cols=217 Identities=34% Similarity=0.587 Sum_probs=166.7
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI 347 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~ 347 (651)
..+|..+++...|. ++ |||+|++++|++.. ....+||.|+++|++||+||+|++++++++++|+.+|
T Consensus 10 ~~~p~~v~~~~iG~----S~-------~Gr~i~~~~i~~~~~~~~~~k~~v~i~~~~Hg~E~~g~~~~l~~~~~L~~~~- 77 (279)
T PF00246_consen 10 ARYPDIVRLESIGK----SY-------EGRPIYALTIGSNSNGSDPGKPTVLIIAGIHGNEWIGSEALLYLIEELLSGY- 77 (279)
T ss_dssp HHSTTTEEEEEEEE-----T-------TS-EEEEEEESSSTTTTSTTSEEEEEEE-SSTT-THHHHHHHHHHHHHHHHT-
T ss_pred HHCCCcEEEEEeeE----CC-------CCCeEEEEEeecccccccccccceEEEecccccccCchHHHHHHHHHhhccc-
Confidence 35677777777777 77 99999999999764 3456899999999999999999999999999999998
Q ss_pred cCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCC----------------CCCCCCC
Q psy8322 348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKN----------------KPALTPD 411 (651)
Q Consensus 348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~----------------~~~~~~~ 411 (651)
.|+.++.||++++|+|||++||||+++...++|.|+++|.|..|||||||||+.|. .+.++||
T Consensus 78 -~~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~w~~~R~n~~GvDlNRnf~~~w~~~~~~~~~~~~~y~g~~~~sepE 156 (279)
T PF00246_consen 78 -DDPEVKELLDNVVIYIIPMVNPDGYEYGTSGDRGWRKNRSNANGVDLNRNFPYQWNEEGSSSNPCSETYRGPAPFSEPE 156 (279)
T ss_dssp -TSHHHHHHHHHEEEEEES-SSHHHHHHHHHT-TTCCSTSSBTTS--GGGSSSSSTTSSSSBSSTTSTTB--SSTTTSHH
T ss_pred -cchhhhhhcccceEEEEeeecccceeeeeecccccccccccccccccccccCcccccccccCCCCCcccCCCcchhhhH
Confidence 48999999999999999999999999999999999999999999999999987752 2357899
Q ss_pred hHHHHHHHHHhh-----ccCCCCcC-----CCCC----CCC------------------ccccc-cCcceeccceEeccC
Q psy8322 412 TDVFLHLASTYA-----RLHPTMHM-----KRPC----PGN------------------TVLKF-ENGVTNGAAWYSFSG 458 (651)
Q Consensus 412 ~~~f~~l~~~~a-----~~~~~~~~-----~~~~----~~~------------------~~~~~-~~gi~n~~~~y~~sG 458 (651)
.++++.+.+... +-|..... ...+ ... ....+ ..|+.++..||+++|
T Consensus 157 t~al~~~~~~~~~~~~id~H~~~~~~~~p~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~G 236 (279)
T PF00246_consen 157 TRALRNLIQDWNPDFFIDFHSGGNAILYPYGYSYDEPPPDADELRSLARAFAEALGSMSRGQNYDSYGITNGDNWYPASG 236 (279)
T ss_dssp HHHHHHHHHHTTEEEEEEEEESSSEEEESESSSSTSSTTTHHHHHHHHHHHHHHHHCHTTTTTBSEEEEEHHHHTTTTSS
T ss_pred HHHHHHHHhhcceeEEEeccccccceeeecccccccCCchhhhhhHHHHHHHHHhhhccccccccccCCccccccccccc
Confidence 999999987652 11111110 1011 000 00012 334455566899999
Q ss_pred cccchhhhccce-eEEEEEecccC--CCCCCCcchhhhhchHH
Q psy8322 459 GMADYNYLYHGC-LELTLEISCCR--YPAPSEIPIHWRSNQNA 498 (651)
Q Consensus 459 ~~~D~~y~~~~~-~~~T~El~~~~--~p~~~~i~~~w~~nr~a 498 (651)
++.||+|...++ +++|+||+||+ +||.++|..+|++|+++
T Consensus 237 ~~~D~~~~~~g~~~~~t~E~~~~~~f~p~~~~i~~~~~~~~~~ 279 (279)
T PF00246_consen 237 SSDDYAYYHHGIPFSFTLELGCCGNFYPPASEIEPIWEENWEA 279 (279)
T ss_dssp SHHHHHHHHTTSSEEEEEEESSSSSTSS-GGGHHHHHHHHHH-
T ss_pred ccceeehhhcCCcEEEEEEeCCCCCccCCHHHHHHHHHHHhhC
Confidence 999999987777 99999999998 79999999999999864
No 75
>cd06231 Peptidase_M14-like_4 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=99.88 E-value=6.2e-22 Score=198.59 Aligned_cols=125 Identities=28% Similarity=0.464 Sum_probs=110.4
Q ss_pred cEEEEEeccccC-CceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEE
Q psy8322 48 MTELYSIGKSVL-GKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIH 126 (651)
Q Consensus 48 ~~~~~~iG~S~e-gr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~ 126 (651)
.+++..+|+..+ +++|+++++.+. .++||.|+|+||+||+||.|++++++|++.+.. .++++++|+
T Consensus 14 ~~~~~~~g~~~~~~~pL~~l~~~~~---~~~~p~vlI~gGiHG~E~~G~~a~l~~l~~l~~----------~~l~~~~i~ 80 (236)
T cd06231 14 RLDVREYGQLAYQSYPLYALKSRGW---DSDLPRVLITAGIHGDEPAGPLGALEFLRAAAL----------ELAQDVNLS 80 (236)
T ss_pred ceEEEEccccccCCeeEEEEEcCCC---CCCCCEEEEECCCCCCcHHHHHHHHHHHHHHHH----------HHhcCCeEE
Confidence 468889999665 999999999764 247899999999999999999999999999875 368889999
Q ss_pred EEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC--CcEEEEE
Q psy8322 127 LLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV--PFVMSLQ 204 (651)
Q Consensus 127 iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~--~~~~~i~ 204 (651)
|+|++|||||+... |.|+.|+||||||+. +.++||++++++++.+. ++.+++|
T Consensus 81 ivP~vNPdG~~~~~---------R~n~~g~DLNR~F~~----------------~~~~~E~~al~~~~~~~~~~~~~~ID 135 (236)
T cd06231 81 VYPCINPSGFEAIT---------RWNRNGIDPNRSFRS----------------ESPSPEVRLLMEWLRRLGAAFDLHID 135 (236)
T ss_pred EEECcChhHHhcCc---------cCCCCCccccCCCCC----------------CCCCHHHHHHHHHHHHhCCCcEEEEE
Confidence 99999999999754 889999999999983 46789999999999988 7999999
Q ss_pred EecCce
Q psy8322 205 LHGGNV 210 (651)
Q Consensus 205 ~H~~~~ 210 (651)
+|++..
T Consensus 136 LH~~~~ 141 (236)
T cd06231 136 LHEDTE 141 (236)
T ss_pred eCCCCC
Confidence 999873
No 76
>cd03856 M14_Nna1_like Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subfamily includes the human AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. M
Probab=99.87 E-value=5.9e-22 Score=202.95 Aligned_cols=180 Identities=16% Similarity=0.125 Sum_probs=133.1
Q ss_pred CeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCCh
Q psy8322 272 PFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDS 351 (651)
Q Consensus 272 p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~ 351 (651)
+..+++...|. ++ |||+|++++++.. .+||+||+.|++||+||+|++++++++++|+.+ ++
T Consensus 25 ~~~v~l~~IG~----s~-------egr~i~~~~~~~~----~~k~~i~i~a~iH~~E~~~~~~~~~li~~Ll~~----~~ 85 (269)
T cd03856 25 GNSCDLLTITS----PP-------EGNDIKYEHLCSF----ANKKYIFLIARVHPGETNASWVMKGFLEFLLSD----NP 85 (269)
T ss_pred CCceeEEEecc----CC-------CCccccceeccCC----CCCcEEEEEcCcCCCchHHHHHHHHHHHHHHhC----CH
Confidence 45567777776 77 9999999999754 389999999999999999999999999999974 45
Q ss_pred hhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHhhc------c
Q psy8322 352 NIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYAR------L 425 (651)
Q Consensus 352 ~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~a~------~ 425 (651)
.++.||++++|+|||++||||+++.+ | |.++.|+||||||+- +....+|+...++.+...+.. .
T Consensus 86 ~~~~ll~~~~~~ivP~~NPDG~~~g~-----~---R~n~~G~DLNR~~~~--p~~~~~pE~~~~~~~~~~~~~~~~~~~~ 155 (269)
T cd03856 86 TAQSLRESFVFKIVPMLNPDGVIRGN-----Y---RCSLSGVDLNRQWQN--PSPDLHPEIYLVKGLMLYLAAGKRGVLF 155 (269)
T ss_pred HHHHHHhcCeEEEEeeeCCccccccC-----C---cCCCCCCCcCCCCCC--CCCCCCCCHHHHHHHHHHHHhccCCceE
Confidence 58999999999999999999998753 3 558899999999963 344678999998888777621 0
Q ss_pred CCCCcCCC--------CCCCC------------------------ccccccCcceeccceEeccCcccchhhhc-cceeE
Q psy8322 426 HPTMHMKR--------PCPGN------------------------TVLKFENGVTNGAAWYSFSGGMADYNYLY-HGCLE 472 (651)
Q Consensus 426 ~~~~~~~~--------~~~~~------------------------~~~~~~~gi~n~~~~y~~sG~~~D~~y~~-~~~~~ 472 (651)
...+|... .|... .+..|..+ +...-|+.+|++.||.|.. +.+++
T Consensus 156 ~idlH~~~~~~~~f~yG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~--~~~~~~~~~gtsr~~~~~~~~i~~s 233 (269)
T cd03856 156 YCDFHGHSRKKNVFMYGCSFKDEVWDQGYRIIPKMLSQNAPLFCMFGCSFKVE--KSKASDPDRGTGRVVVAKQIKVQHS 233 (269)
T ss_pred EEEecCCCccCceEeecCCCchhhhhhHHHHHHHHHHhhChhhhhcCCCcCCC--cCCcccCCCChHHHHHHHhcCCcEE
Confidence 00111110 01100 01112222 2222378999999999976 55599
Q ss_pred EEEEecccCC
Q psy8322 473 LTLEISCCRY 482 (651)
Q Consensus 473 ~T~El~~~~~ 482 (651)
||+|++.++.
T Consensus 234 yTlE~~~~g~ 243 (269)
T cd03856 234 YTMEVTFNGN 243 (269)
T ss_pred EEEecCCCCc
Confidence 9999997654
No 77
>cd06232 Peptidase_M14-like_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.87 E-value=1.1e-21 Score=190.93 Aligned_cols=135 Identities=23% Similarity=0.194 Sum_probs=113.7
Q ss_pred CCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHH
Q psy8322 29 HNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVE 108 (651)
Q Consensus 29 ~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~ 108 (651)
.++.+|...|..| |.+ ..--+|+|||+|++++|+ .+||.|||.||+||+||+|+.++++|++.|++
T Consensus 2 ~~~~~i~~~l~~~----~g~---~~~a~S~EGR~I~~l~i~------~~Kp~I~I~gGvHarEwig~~~al~fi~~L~~- 67 (240)
T cd06232 2 LSAGQIAYELAVL----PGI---EFAARSRQGRPVTGRYVA------GLDHPVVISAGQHANETSGVVGALRAAEALAA- 67 (240)
T ss_pred CCHHHHHHHHhhc----CCc---cccccccCCCeeeEEEec------CCCcEEEEeCCcCCCcchhHHHHHHHHHHHhc-
Confidence 4678888888777 553 225679999999999993 24899999999999999999999999999985
Q ss_pred hccCChhHHHhhcCceEEEEeccCcccccccccccccCCCC------CCCccCcCCC-CCCCcccCCCCCCCCCCCCCCC
Q psy8322 109 YIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRG------RNNINNHDLN-RQFPDYFRHNRSNIPTLVSTSQ 181 (651)
Q Consensus 109 ~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~------r~n~~GvDLN-Rnf~~~w~~~~s~~p~y~G~~~ 181 (651)
+++++|+|+|++|||||++.. .-+|++.. |.++.|.|+| |++. +
T Consensus 68 -----------~~~~n~~I~P~vNPDGYe~~~-~L~r~nP~~~hHaaR~~A~g~D~~fr~~~-----------------~ 118 (240)
T cd06232 68 -----------RPGAHFALIPLENPDGYALHE-RLRAEHPRHMHHAARYTALGDDLEYREFP-----------------P 118 (240)
T ss_pred -----------cCCceEEEEEeeCCcHHHhhc-hhhccCcccccchhhhcccCCCcccccCC-----------------c
Confidence 678999999999999999853 11244443 8889999999 9875 3
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEEecC
Q psy8322 182 SIDPEVQAVIDWMNSVPFVMSLQLHGG 208 (651)
Q Consensus 182 ~sepEt~al~~~~~~~~~~~~i~~H~~ 208 (651)
+ .|++++++++.++.+.+.||+|++
T Consensus 119 ~--~Es~~~~~~~~~~~~~~hiDlHey 143 (240)
T cd06232 119 F--GEREARHQALAKSGAQLHVNLHGY 143 (240)
T ss_pred c--hHHHHHHHHHHhhCCcEEEECCCC
Confidence 3 899999999999999999999998
No 78
>cd06234 M14_Nna1_like_1 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP)-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.
Probab=99.86 E-value=3.5e-21 Score=195.64 Aligned_cols=122 Identities=21% Similarity=0.260 Sum_probs=105.0
Q ss_pred EEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhh
Q psy8322 274 VMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNI 353 (651)
Q Consensus 274 ~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v 353 (651)
.++.+..|. ++ |||+|++|+|+++ ..+||.||++|++||+|++|..++..+++.|+..+ |+.+
T Consensus 28 ~v~~~~iG~----S~-------eGR~i~~l~I~~~---~~~k~~V~i~a~iH~~E~~g~~~~~~ll~~L~~~~---d~~~ 90 (263)
T cd06234 28 DVRLEVLGQ----TV-------QGRDIDLLTFGEP---GPGKKKLWIIARQHPGETMAEWFMEGLLERLLDPD---DAVA 90 (263)
T ss_pred CeEEEEEEE----cC-------CCCeEEEEEEccC---CCCCCEEEEECCCCCCcHHHHHHHHHHHHHHhhcC---CHHH
Confidence 467777777 78 9999999999874 24789999999999999999999999999999854 7899
Q ss_pred hhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322 354 RFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY 422 (651)
Q Consensus 354 ~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~ 422 (651)
++||++++|+|||++||||+++.+ .|.|+.|+||||||+. ....++||...++.+..+.
T Consensus 91 ~~ll~~~~~~IvP~~NPDG~~~g~--------~R~n~~GvDLNRnw~~--p~~~s~PEt~av~~~~~~~ 149 (263)
T cd06234 91 RALLEKAVFYVVPNMNPDGSARGH--------LRTNAAGANLNREWAE--PSAERSPEVFAVRQRMEET 149 (263)
T ss_pred HHHHhcCEEEEEeeecchhhhhcC--------CccCCCCCCCCCCCCC--CCCCCCHHHHHHHHHHHhc
Confidence 999999999999999999999864 2689999999999963 2345789998888877654
No 79
>PRK10602 murein peptide amidase A; Provisional
Probab=99.85 E-value=1.1e-21 Score=195.86 Aligned_cols=168 Identities=21% Similarity=0.228 Sum_probs=120.5
Q ss_pred CCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCcee
Q psy8322 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL 375 (651)
Q Consensus 296 egr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~ 375 (651)
|||+|++++++.+ .++.++++|++||+||+|+++++++++.|+.+ ..+++|||++||||+++
T Consensus 25 egrpi~~l~~~~~-----~~~~vli~agiHG~E~~g~~~~~~l~~~l~~~-------------~~~~~iipvvNPDG~~~ 86 (237)
T PRK10602 25 LGAPLLWFPAPAA-----SRESGLILAGTHGDETASVVTLSCALRTLTPS-------------LRRHHVVLAVNPDGCQL 86 (237)
T ss_pred CCCceEEEEcCCC-----CCceEEEEecCCCCcHHHHHHHHHHHHhhhhh-------------ccceEEEEEECcccccc
Confidence 9999999999754 47899999999999999999999999988643 23579999999999987
Q ss_pred eecccccCCCCCCCceeEeeccCCCC-CC-----------------------CCCCCCCChHHHHHHHHHhh-ccCCCCc
Q psy8322 376 AVEGNCRSGRGRTPPFLISLFLPFPV-TK-----------------------NKPALTPDTDVFLHLASTYA-RLHPTMH 430 (651)
Q Consensus 376 ~~~~~~~~~kgr~~~~gvdlnrnf~~-~~-----------------------~~~~~~~~~~~f~~l~~~~a-~~~~~~~ 430 (651)
.. |.|+.|+|||||||. .| ..+.++||.+.+..+..++. .....+|
T Consensus 87 ~~---------R~n~~GvDLNRnFp~~~w~~~~~~~~w~~~~~~~~~~~y~G~~p~SepEt~al~~~i~~~~~~~~~s~H 157 (237)
T PRK10602 87 GL---------RANANGVDLNRNFPAANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQALCQLIHRLQPAWVVSFH 157 (237)
T ss_pred cc---------ccCCCCCchhhcCCCcccccccccccccCCCCccchhhccCCCCCCCHHHHHHHHHHHHcCCCEEEEee
Confidence 74 678999999999995 22 23446888888888887763 1111222
Q ss_pred CCCCCCCC-cc--------ccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhh
Q psy8322 431 MKRPCPGN-TV--------LKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRS 494 (651)
Q Consensus 431 ~~~~~~~~-~~--------~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~ 494 (651)
....+... .. ..|..++.. ...|+.+|++.||++. .+++.+|+||++ .+.+++++.+|..
T Consensus 158 sP~~~~~~~~~~~~~~~la~af~~~~~~-~~~y~~~Gs~~~~a~~-~giP~it~El~~--~~~~~~v~~~~~~ 226 (237)
T PRK10602 158 DPLACIEDPRHSELGEWLAQAFELPLVT-SVGYETPGSFGSWCAD-LNLHCITAELPP--ISADEASEKYLFA 226 (237)
T ss_pred ccccccCCccchHHHHHHHHHhCCCeEe-ecCCCCCCcHHHHHHH-cCCcEEEEecCC--cCcHHHHHHHHHH
Confidence 21111110 00 112222222 2348899999999995 456669999997 6677777777654
No 80
>cd06238 Peptidase_M14-like_1_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T
Probab=99.82 E-value=1.2e-20 Score=192.66 Aligned_cols=119 Identities=24% Similarity=0.251 Sum_probs=101.3
Q ss_pred CCcceEEEEeeCCCc-----------------------cCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChh
Q psy8322 296 ESKDLLVVNISTAPV-----------------------HQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSN 352 (651)
Q Consensus 296 egr~i~~l~is~~~~-----------------------~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~ 352 (651)
|||+|.++.|++... ....+|+||+.|+||||||+|++++++++++|+... |+.
T Consensus 6 egR~l~~~~I~s~~n~~~l~~~~~~~~~la~p~~~~~~~~~~~~~v~i~~~iH~~E~~g~~~~l~l~~~L~~~~---~~~ 82 (271)
T cd06238 6 EGRPLLLATITSPENIARLDQIREDHLALADPAATSSLISDQPVVVWLGYSVHGNEISGTEAALLTAYHLAAAQ---GDE 82 (271)
T ss_pred CCCeeEEEEEeCHHHHHhHHHHHHHHHHhcCccccccccccCCcEEEEECCcCCCChHHHHHHHHHHHHHHHcC---CHH
Confidence 999999999988532 123689999999999999999999999999999864 788
Q ss_pred hhhcccceeEEEEeccCcCCceee-e----------cccccCC-------CCCCCceeEeeccCCCCCCCCCCCCCChHH
Q psy8322 353 IRFLLDNTRIHLLPNLNPDGSELA-V----------EGNCRSG-------RGRTPPFLISLFLPFPVTKNKPALTPDTDV 414 (651)
Q Consensus 353 v~~ll~~~~~~i~P~~NpDG~~~~-~----------~~~~~~~-------kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~ 414 (651)
+++||++++|+|+|++||||++++ . +.|+.|| .||.|++|+||||||.. .++||++.
T Consensus 83 ~~~ll~~~~i~i~P~~NPDG~~r~~~w~~~~~~~~~~~d~~~r~~~~~wp~~R~n~~g~DLNRD~~~-----~s~pEtra 157 (271)
T cd06238 83 IEALLDNAVVLIDPMQNPDGRDRFVNWYNSNRGMVPSADPQDREHNEPWPGGRTNHYWFDLNRDWLP-----LTQPESRG 157 (271)
T ss_pred HHHHHhcCEEEEEeccCCCHHHHHHHhhhhccCCccccchhhhhcccCCccccccccCccccccccc-----ccCHHHHH
Confidence 999999999999999999999963 2 4556554 46789999999999963 45899998
Q ss_pred HHHHHHHh
Q psy8322 415 FLHLASTY 422 (651)
Q Consensus 415 f~~l~~~~ 422 (651)
+..+..++
T Consensus 158 ~~~~~~~~ 165 (271)
T cd06238 158 RLAAYHEW 165 (271)
T ss_pred HHHHHHhc
Confidence 88887776
No 81
>cd06908 M14_AGBL4_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-4, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL4 and the mouse cytosolic carboxypeptidase (CCP)-6. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal
Probab=99.82 E-value=4.2e-20 Score=187.32 Aligned_cols=130 Identities=18% Similarity=0.192 Sum_probs=111.8
Q ss_pred CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC--ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhh
Q psy8322 269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP--VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEY 346 (651)
Q Consensus 269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~--~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y 346 (651)
..+|..++.+..|. ++ |||+|++|+|++++ ....+||.||++|++|++||+|+.++++++++|+.+
T Consensus 6 ~~~p~~~~~~~iG~----S~-------eGR~i~~l~It~~~~~~~~~~k~~I~i~ariHp~E~~~s~~~~~li~~L~~~- 73 (261)
T cd06908 6 KRSLDYFRREQLGQ----SV-------QKRRLDLLTIDSPDNLREDSEKKVIFITARVHPGESPSSYVCQGLIDFLVSN- 73 (261)
T ss_pred hhCCCcEEEEEeEE----cC-------CCCeeEEEEEcCCCccccCCCCcEEEEECCcCCCChHHHHHHHHHHHHHhhC-
Confidence 45677788888887 78 99999999998764 234579999999999999999999999999999973
Q ss_pred ccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHhh
Q psy8322 347 IRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYA 423 (651)
Q Consensus 347 ~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~a 423 (651)
|+.++.|+++++|+|||++||||+++.. .|.++.|+||||||+.. .+..+|+....+.+...++
T Consensus 74 ---~~~~~~L~~~~~~~IvP~~NPDGv~~gn--------~R~~~~G~DLNR~w~~p--~~~~~PEv~av~~~i~~~~ 137 (261)
T cd06908 74 ---HPIAKVLREHLVFKIVPMLNPDGVFLGN--------YRCSLMGHDLNRHWHDP--SPWAHPTLHAVKNLLKELD 137 (261)
T ss_pred ---CHHHHHHHHhCcEEEEeeecCcceeecC--------CcCcCcCcCCCCCCCCC--CcccChHHHHHHHHHHHhh
Confidence 7889999999999999999999999863 48889999999999743 3457899999888888764
No 82
>cd06242 Peptidase_M14-like_1_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.80 E-value=1.6e-19 Score=185.01 Aligned_cols=123 Identities=25% Similarity=0.231 Sum_probs=105.8
Q ss_pred CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCc--cCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322 270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPV--HQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI 347 (651)
Q Consensus 270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~--~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~ 347 (651)
..|...+.+..|. ++ |||+|++++|++++. ....||.||++|+|||+||+|++++++++++|+.++
T Consensus 18 ~~~~i~~~~~iG~----S~-------eGR~i~~l~is~~~~~~~~~~kp~V~i~~giHg~E~~g~~a~l~ll~~L~~~~- 85 (268)
T cd06242 18 KNDWMSYHSDIGK----SE-------EGRSIPYVYLSTSKSSSSSSKKLRVWLQGGVHGNEPAGDEAALALLGKLDNNP- 85 (268)
T ss_pred HCCCeEEEEECcc----cc-------CCceeEEEEEecCCccccCCCCCEEEEECCcCCCCHHHHHHHHHHHHHHHhCc-
Confidence 4566555777787 88 999999999997652 356799999999999999999999999999999753
Q ss_pred cCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322 348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY 422 (651)
Q Consensus 348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~ 422 (651)
...+||++++|+|+|++||||+++.. |.|+.|+||||+|.. ..+||.+.+..+...+
T Consensus 86 ----~~~~lL~~~~i~ivP~~NPDG~~~~~---------R~na~g~DlNRD~~~-----~~~pEtra~~~~~~~~ 142 (268)
T cd06242 86 ----KWASVLEKIDIIVLPRYNPDGSAYFQ---------RTLATGYDPNRDHTK-----LARQQTRDIKEAFSKF 142 (268)
T ss_pred ----hHHHHHhcCeEEEEeccCcchhhhcc---------ccCCcCcccCCCCCc-----ccCHHHHHHHHHHHHh
Confidence 34589999999999999999999876 889999999999954 3589999999988877
No 83
>cd06235 M14_Nna1_like_2 Subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human Nna1/AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induc
Probab=99.79 E-value=5.6e-19 Score=180.25 Aligned_cols=125 Identities=15% Similarity=0.206 Sum_probs=105.4
Q ss_pred eEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC---ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC
Q psy8322 273 FVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP---VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG 349 (651)
Q Consensus 273 ~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~---~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~ 349 (651)
..++.+..|. ++ |||+|++|+|++.. ....+||.|++.|++||+||+|+.++++++++|+..
T Consensus 11 ~~~~~~~iG~----S~-------eGr~i~~l~i~~~~~~~~~~~~k~~V~i~a~iH~~E~~~s~~~~~ll~~Ll~~---- 75 (258)
T cd06235 11 QYLKRKILCT----TL-------GGLPVPLLTITSPSSKSIPIKKKKVIVITARQHPGETNSSFVMQGFIDFLLSD---- 75 (258)
T ss_pred CceEEEEeEE----cC-------CCCeeeEEEEeCCcccccccCCCcEEEEECCcCCCChHHHHHHHHHHHHHhcC----
Confidence 3456666666 66 99999999998753 134579999999999999999999999999999864
Q ss_pred ChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322 350 DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY 422 (651)
Q Consensus 350 d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~ 422 (651)
++.++.|++++.|+|||++||||+++.. .|.+..|+||||||... .+..+|+....+.+...+
T Consensus 76 ~~~~~~Ll~~~~~~iiPm~NPDG~~~g~--------~R~n~~GvDLNR~w~~p--~~~~~PE~~~~~~~i~~~ 138 (258)
T cd06235 76 SPEAQYLRENFIFKIIPMLNPDGVIHGN--------YRCSLSGIDLNRQWKNP--DKKLHPEIYHVKQLIKKL 138 (258)
T ss_pred CHHHHHHHhccEEEEEccccccceeecC--------CcCCCCCCCcCCCCCCC--CcccCcHHHHHHHHHHHH
Confidence 4678999999999999999999998632 48899999999999753 245789999999888877
No 84
>cd06239 Peptidase_M14-like_1_2 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.79 E-value=1.4e-19 Score=180.42 Aligned_cols=121 Identities=21% Similarity=0.396 Sum_probs=105.9
Q ss_pred cCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322 268 MNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI 347 (651)
Q Consensus 268 ~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~ 347 (651)
++++|..++++..|. ++ |||+|++|+|++ ++|+|+++|++||+||+|++++++++++|+.+.
T Consensus 3 ~~~~p~~v~~~~iG~----S~-------eGrpI~~l~ig~------g~~~vli~agiHG~E~~g~~all~ll~~L~~~~- 64 (231)
T cd06239 3 LEKLPAKFKVEVIGK----SV-------EGRPIYSVKFGS------GKIKILLWSQMHGNESTTTKALLDLLNFLGTSK- 64 (231)
T ss_pred HHHCCCeeEEEEeeE----CC-------CCCeEEEEEEcC------CCcEEEEEeccCCCCHHHHHHHHHHHHHHHHCC-
Confidence 346777888888888 78 999999999986 469999999999999999999999999999865
Q ss_pred cCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322 348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY 422 (651)
Q Consensus 348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~ 422 (651)
++.++.||++++|+|||++||||+++.. |.|..|+||||+|+.. .+||..++..+..++
T Consensus 65 --~~~~~~ll~~~~v~iiP~lNPDG~~~~~---------R~N~~GvDLNRdf~~~-----s~PEtr~l~~~~~~~ 123 (231)
T cd06239 65 --DQEAKKILDEVTLVIIPMLNPDGAEAYT---------RVNANGVDLNRDAQDL-----SQPESRLLRDVYDGF 123 (231)
T ss_pred --CHHHHHHHhCCEEEEEeccCccHHHHcc---------cCCCcCCcCCCCCCCC-----ChHHHHHHHHHHHhc
Confidence 5566899999999999999999998743 7788899999999743 589999988887775
No 85
>cd06243 Peptidase_M14-like_1_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.78 E-value=3.7e-19 Score=178.22 Aligned_cols=110 Identities=28% Similarity=0.423 Sum_probs=96.4
Q ss_pred CCcceEEEEeeCCCcc----CCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcC
Q psy8322 296 ESKDLLVVNISTAPVH----QLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPD 371 (651)
Q Consensus 296 egr~i~~l~is~~~~~----~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpD 371 (651)
|||+|++|+|++.+.. ...+|.|++.|++||+||+|++++++++++|+.. + ++.+++||+++.|+|+|++|||
T Consensus 6 eGRpi~~l~i~~~~~~~~~~~~~~p~v~i~~giHG~E~~G~~a~l~ll~~L~~~--~-~~~~~~lL~~~~i~ivP~~NPD 82 (236)
T cd06243 6 RGRPIHLVRVGFAEGPSALDIANRPTVLLVGTQHGDEPAGREALLIIARDLAFG--E-DEELVPLLHQTTVLFVPTANPD 82 (236)
T ss_pred CCCeeEEEEEecCCCccccccCCCCEEEEECCcCCCChHHHHHHHHHHHHHHhc--C-CHHHHHHHhcceEEEEeCcCcc
Confidence 9999999999986532 3578999999999999999999999999999863 2 7889999999999999999999
Q ss_pred CceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322 372 GSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY 422 (651)
Q Consensus 372 G~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~ 422 (651)
|+++. +|.|++|+||||||+.. .+||.+.+..+..++
T Consensus 83 G~~~~---------~R~n~~g~DlNRd~~~~-----~~pEt~al~~~~~~~ 119 (236)
T cd06243 83 GREAD---------TRSNADGIDINRDHLLL-----NTPEAQALASVLRDY 119 (236)
T ss_pred HhhcC---------CcCCCCCcccCCCCCCC-----CCHHHHHHHHHHHhc
Confidence 99973 58899999999999753 478888888877766
No 86
>cd06236 M14_AGBL5_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-5, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL5 and the mouse cytosolic carboxypeptidase (CCP)-5. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal
Probab=99.75 E-value=5.3e-18 Score=174.40 Aligned_cols=115 Identities=23% Similarity=0.277 Sum_probs=98.7
Q ss_pred CCcceEEEEeeCCCcc----------------------CCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhh
Q psy8322 296 ESKDLLVVNISTAPVH----------------------QLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNI 353 (651)
Q Consensus 296 egr~i~~l~is~~~~~----------------------~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v 353 (651)
|||+|++|+|++.... ..+||.||++|++|++||+|+.++++++++|+.++ |+.+
T Consensus 26 eGR~i~lLtITs~~~~~~~~~~~~~~l~~~~~~~~~~~~~~K~~V~I~ariHp~E~~~s~~~~~ll~~Ll~~~---d~~a 102 (304)
T cd06236 26 EGRRIDLLTITSCHGKLEQREPRLEGLFPDRKTPRPHFFFGKPVVFISSRVHPGETPSSFVFNGFLKFLLNKD---DPRA 102 (304)
T ss_pred CCCceEEEEEecCcccccccccccccccccccccccccccCCcEEEEECCcCCCCchHHHHHHHHHHHHHhCC---CHHH
Confidence 9999999999875421 25799999999999999999999999999999864 7889
Q ss_pred hhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHhh
Q psy8322 354 RFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYA 423 (651)
Q Consensus 354 ~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~a 423 (651)
+.|+++++|+||||+||||+++.+. |.+..|+||||+|--. .+...|+...++.+...+.
T Consensus 103 ~~L~~~~~~~IvPmlNPDGv~~g~~--------R~~~~G~DLNR~y~~p--~~~~~Pei~aik~~i~~~~ 162 (304)
T cd06236 103 ALLRRRFVFKLIPMLNPDGVYRGHY--------RTDTRGVNLNRVYLNP--DPELHPSIYAIKKLILYLH 162 (304)
T ss_pred HHHHhCCeEEEEEeEcccccccCcc--------ccCCcCCCcCcCCCCC--CcccCHHHHHHHHHHHHhh
Confidence 9999999999999999999998653 7899999999987432 3456888888888887663
No 87
>cd06241 Peptidase_M14-like_1_4 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.74 E-value=5.2e-18 Score=173.60 Aligned_cols=126 Identities=25% Similarity=0.263 Sum_probs=103.6
Q ss_pred EEEEeeCceecccCCCcccCCCCcceEEEEeeCCCc------cCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322 275 MSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPV------HQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR 348 (651)
Q Consensus 275 ~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~------~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~ 348 (651)
++.+..|. ++ |||+|++|+|+.+.. ...+||.||++|||||+||.|.+++++++++|+.++.
T Consensus 13 v~~~~iG~----S~-------eGR~i~~l~is~~~~~~~~~~~~~~kp~v~i~agiH~~E~~G~~a~~~ll~~L~~~~~- 80 (266)
T cd06241 13 IRLESFGK----TP-------EGRPLHLLVLSKDGAFTPEEAKRSGKPVVLVQAGIHAGEIDGKDAGLMLLRDLADGKK- 80 (266)
T ss_pred eEEEEeEe----CC-------CCCeeEEEEEecCCccchhhhcccCCCEEEEeCCcCCCCchHHHHHHHHHHHHHhcch-
Confidence 46666666 66 999999999987541 2357999999999999999999999999999998642
Q ss_pred CChhhhhcccceeEEEEeccCcCCceeeecccccC------CCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322 349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRS------GRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY 422 (651)
Q Consensus 349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~------~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~ 422 (651)
+ .+|++++|+|||++||||+++....+|.. ...|.|+.|+||||+|+.. .+|+.+++..+...+
T Consensus 81 --~---~ll~~~~i~ivP~~NpDG~~~~~~~~r~~q~gp~~~~~R~na~g~DLNRdf~~~-----~~pEtra~~~~~~~~ 150 (266)
T cd06241 81 --D---ALLDKVVLVFIPVFNVDGHERRSPYNRTNQNGPEEYGWRGNARNLNLNRDFIKL-----DAPEMRAFAKLFNKW 150 (266)
T ss_pred --H---HHHhCCEEEEEeCCCccHHHhcccccccccCCCCccCceecccceecCCCCccc-----CCHHHHHHHHHHHHh
Confidence 2 79999999999999999999876544432 2357889999999999743 479999999888775
No 88
>cd06904 M14_MpaA_like Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A (MpaA) and related proteins. MpaA is a member of the M14 family of metallocarboxypeptidases (MCPs), however it has an exceptional type of activity, it hydrolyzes the gamma-D-glutamyl-meso-diaminopimelic acid (gamma-D-Glu-Dap) bond in murein peptides. MpaA is specific for cleavage of the gamma-D-Glu-Dap bond of free murein tripeptide; it may also cleave murein tetrapeptide. MpaA has a different substrate specificity and cellular role than endopeptidase I, ENP1 (ENP1 does not belong to this group). MpaA works on free murein peptide in the recycling pathway.
Probab=99.74 E-value=3.5e-18 Score=165.23 Aligned_cols=143 Identities=25% Similarity=0.342 Sum_probs=102.1
Q ss_pred EEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeecc
Q psy8322 318 VKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFL 397 (651)
Q Consensus 318 v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnr 397 (651)
|+++|++||+||+|.++++++++.|+..+ |++.+|+|||++||||+++. .|.+..|+||||
T Consensus 1 vli~agiHG~E~~g~~~~~~l~~~l~~~~----------l~~~~i~ivP~~NPdG~~~~---------~R~n~~gvDLNR 61 (178)
T cd06904 1 VLIIGGIHGDEPASVSDLEELLRILPGLI----------LRGLSWYVIPVLNPDGLLRA---------TRCNANGVDLNR 61 (178)
T ss_pred CEEEeccCCCCHHHHHHHHHHHHHHHHHh----------hcCCeEEEEeCcCccHHhhC---------cccCCCCcChhh
Confidence 58999999999999999999999998643 78899999999999999983 366778999999
Q ss_pred CCCCCC-------------CCCCCCCChHHHHHHHHHh-hccCCCCcCCCCCCCCcc------ccccC-cceeccceEec
Q psy8322 398 PFPVTK-------------NKPALTPDTDVFLHLASTY-ARLHPTMHMKRPCPGNTV------LKFEN-GVTNGAAWYSF 456 (651)
Q Consensus 398 nf~~~~-------------~~~~~~~~~~~f~~l~~~~-a~~~~~~~~~~~~~~~~~------~~~~~-gi~n~~~~y~~ 456 (651)
|||+.+ ....++||++.+..+..++ ....-.+|....|-.... ..+.. ...+. .|+.
T Consensus 62 nFp~~~~~~~~~~~~~~~G~~~~sepEt~al~~~~~~~~~~~~idlHs~~~~~~~~~~~~~la~~~g~~~~~~~--~~~~ 139 (178)
T cd06904 62 NFPTKDWPPGASRYRRYPGPKPGSEPESRALMDLIERFKPDVVVSFHAPLGVLDGDGPNEPLARKFGYLGFDDL--GYPT 139 (178)
T ss_pred cCCccccccCCCcccccCCCCCCCCHHHHHHHHHHHhcCCeEEEEeCCCCCeecCCCchhHHHHHhCCCccccC--CccC
Confidence 999653 3445677888888777664 122222333221111000 01111 11111 2667
Q ss_pred cCcccchhhhccceeEEEEEecccC
Q psy8322 457 SGGMADYNYLYHGCLELTLEISCCR 481 (651)
Q Consensus 457 sG~~~D~~y~~~~~~~~T~El~~~~ 481 (651)
.|++.||++...+++++|+|++.+.
T Consensus 140 ~G~~~~~a~~~~gip~it~Elg~~~ 164 (178)
T cd06904 140 PGSLGSWAGVERNIPVITIELPYNL 164 (178)
T ss_pred CCcHHHHHhhcCCCeEEEEEcCCcc
Confidence 8999999998778999999998655
No 89
>cd06244 Peptidase_M14-like_1_7 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.73 E-value=8.2e-18 Score=169.54 Aligned_cols=113 Identities=23% Similarity=0.211 Sum_probs=96.8
Q ss_pred CCcceEEEEeeCCC-----------------------cc----CCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322 296 ESKDLLVVNISTAP-----------------------VH----QLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR 348 (651)
Q Consensus 296 egr~i~~l~is~~~-----------------------~~----~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~ 348 (651)
|||+|+++.||+.+ .+ -..++.|++.++|||+|++|+++++.++++|+.++..
T Consensus 6 eGR~l~~~~Is~~~a~ld~~~~~~~~l~l~dp~~~~~~~~~~~~~~~k~v~~~~~iHg~E~~g~~a~l~ll~~L~~~~~~ 85 (268)
T cd06244 6 EGRDIPVVVVAKPEAAVDKYENETLPLMLENPPELADKIEDGTIEDYKPPIINNNIHPDETPGIDAQTELIEELAQEDEI 85 (268)
T ss_pred CCCeeEEEEEeCcHHHHHHHHHHhhhhhhcCcccchhhhccccccccCeEEEEeCcCCCCHHHHHHHHHHHHHHHhcccc
Confidence 99999999998874 00 1247788888999999999999999999999988721
Q ss_pred -------------CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHH
Q psy8322 349 -------------GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVF 415 (651)
Q Consensus 349 -------------~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f 415 (651)
.++++++||+++.|+|+|++||||+++. +|.|++|+||||||.+. ..||++.+
T Consensus 86 ~~~~~~~~~~~~~~~~~i~~lL~~~~i~i~P~~NPDG~~~~---------~R~Na~G~DLNRD~~~~-----sqpEt~av 151 (268)
T cd06244 86 EFNTTDADGNEVTETLDVDDLLEKVIFLFNVTENPDGRVAG---------TRENANGFDLNRDNSFQ-----TQPETQAI 151 (268)
T ss_pred cccccccccccccCCHHHHHHHhcCEEEEEecccCCcceee---------eecCCCccccCCCCCcc-----cCHHHHHH
Confidence 1788999999999999999999999875 48899999999999753 57899888
Q ss_pred HHHHHHh
Q psy8322 416 LHLASTY 422 (651)
Q Consensus 416 ~~l~~~~ 422 (651)
..+...+
T Consensus 152 ~~~~~~w 158 (268)
T cd06244 152 VALIAEW 158 (268)
T ss_pred HHHHHHh
Confidence 8887776
No 90
>cd06240 Peptidase_M14-like_1_3 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T
Probab=99.72 E-value=1.1e-17 Score=170.51 Aligned_cols=119 Identities=23% Similarity=0.210 Sum_probs=95.9
Q ss_pred CCcceEEEEeeCCCc----------------------------cCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322 296 ESKDLLVVNISTAPV----------------------------HQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI 347 (651)
Q Consensus 296 egr~i~~l~is~~~~----------------------------~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~ 347 (651)
|||+|+++.||+... ....||.||+.|+|||+||+|++++++++++|+.+
T Consensus 10 EGR~l~~~~Iss~~n~~~ld~~~~~~~~la~~~~~~~~~a~~~~~~~kp~v~i~~~iHg~E~~g~ea~l~l~~~L~~~-- 87 (273)
T cd06240 10 EGRPQIMAAISSPENLAKLDHYKAILRKLADPRGLTEEQARALIAEGKPIVWIDGGLHSTETGGPQMLMELAYRLATE-- 87 (273)
T ss_pred CCCeEEEEEeeChhHhhhHHHHHHHHhhhhccccccchhhhhhhccCCCEEEEECCcCCCchHHHHHHHHHHHHHHhc--
Confidence 999999999986442 13469999999999999999999999999999985
Q ss_pred cCChhhhhcccceeEEEEeccCcCCceeeec-----ccccCC------CCCCCceeEeeccCCCCCCCCCCCCCChHHHH
Q psy8322 348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVE-----GNCRSG------RGRTPPFLISLFLPFPVTKNKPALTPDTDVFL 416 (651)
Q Consensus 348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~-----~~~~~~------kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~ 416 (651)
.|++++.||+++.|+|+|++||||+++... .+...+ .-+.+..|.||||+|-. ...|+...+.
T Consensus 88 -~d~~~~~lLd~~~i~i~P~~NPDG~er~~~w~~~~~~~~~~~~~~~~~~~~~y~g~DlNRD~~~-----~~~~et~~~~ 161 (273)
T cd06240 88 -EDPEIKRILDNVIVLIVPVANPDGRDRVVDWYMRTLGPPKRDRSPLPPLYGKYVGHDNNRDGYM-----NQQETTNNSR 161 (273)
T ss_pred -CCHHHHHHHhcCEEEEEeCcCCCHHHHhhhhhhhccCCcccCCCCcccccCccCCcCCCcccch-----hcCHHHHHHH
Confidence 289999999999999999999999998542 111111 11445678999998844 3478888888
Q ss_pred HHHHHh
Q psy8322 417 HLASTY 422 (651)
Q Consensus 417 ~l~~~~ 422 (651)
.+...|
T Consensus 162 ~~~~~w 167 (273)
T cd06240 162 KLFLEW 167 (273)
T ss_pred HHHHhc
Confidence 887777
No 91
>cd03857 Peptidase_M14-like_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.72 E-value=1.5e-17 Score=167.01 Aligned_cols=109 Identities=30% Similarity=0.424 Sum_probs=95.2
Q ss_pred CCcceEEEEeeCCCc------cCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccC
Q psy8322 296 ESKDLLVVNISTAPV------HQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLN 369 (651)
Q Consensus 296 egr~i~~l~is~~~~------~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~N 369 (651)
|||+|++++|++... ...+||.|+++|++||+|+.|.++++.++++|+.+ +...+.+|++..|+|+|++|
T Consensus 6 eGRpi~~~~i~~~~~~~~~~~~~~~k~~v~i~~giHg~E~~g~~a~~~l~~~l~~~----~~~~~~ll~~~~i~ivP~~N 81 (226)
T cd03857 6 EGRPLWMVTLTTAEGMKKRALAKEGKPRVWIDAQIHGNESAGSDALLELLRQLASA----SDEEAKMLENIVIVLIPRAN 81 (226)
T ss_pred CCCeEEEEEEeCCccccccccccCCCcEEEEECCcCCCCchHHHHHHHHHHHHHhC----CHHHHHHHhCCEEEEEeccC
Confidence 999999999998542 23478999999999999999999999999999864 33458899999999999999
Q ss_pred cCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322 370 PDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY 422 (651)
Q Consensus 370 pDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~ 422 (651)
|||+++.+ |.|..|+||||+|+.. .+||...+..+...+
T Consensus 82 PDG~~~~~---------R~n~~g~DLNRd~~~~-----~~pEt~~~~~~~~~~ 120 (226)
T cd03857 82 PDGAALFT---------RENANGLDLNRDFLKL-----TQPETRAVREVFIEW 120 (226)
T ss_pred CChHHhcc---------ccCCCcccCCCCCCCc-----CCHHHHHHHHHHHHc
Confidence 99999874 7888999999999865 478999988888776
No 92
>cd06907 M14_AGBL2-3_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-2, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subgroup includes the human AGBL-2, and -3, and the mouse cytosolic carboxypeptidase (CCPs)-2, and -3. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N
Probab=99.68 E-value=1.3e-16 Score=160.63 Aligned_cols=124 Identities=15% Similarity=0.190 Sum_probs=99.9
Q ss_pred EEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC---ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCC
Q psy8322 274 VMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP---VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGD 350 (651)
Q Consensus 274 ~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~---~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d 350 (651)
.++.+..|. ++ |||+|++|+|++.. .....||.||++|++|+|||.|.-++..++++|+. .|
T Consensus 13 ~~~~~~lg~----S~-------eGR~i~~LtIt~~~~~~~~~~~K~~I~I~ariHp~E~~~s~~~~gll~~L~~----~~ 77 (261)
T cd06907 13 FCKLRVLCR----TL-------AGNTVYLLTITSPSSNPSLAAAKKAVVLTARVHPGETNASWMMKGFLDFLTS----NS 77 (261)
T ss_pred ceEEEEEEE----CC-------CCCeeeEEEEcCCCccccccCCCCEEEEECCcCCChHHHHHHHHHHHHHHhc----CC
Confidence 355666666 77 99999999998753 12357999999999999999998888888888874 37
Q ss_pred hhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322 351 SNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY 422 (651)
Q Consensus 351 ~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~ 422 (651)
+..+.|+++++|+||||+||||+.+.+. |.+..|+||||+|...+ ....|+.-..+.+...+
T Consensus 78 ~~a~~Lr~~~~f~IvPmlNPDGv~~G~~--------R~~~~G~DLNR~w~~p~--~~~~P~i~~~k~li~~l 139 (261)
T cd06907 78 PDAQLLRDTFIFKIVPMLNPDGVIVGNY--------RCSLAGRDLNRNYKTPL--KDSFPTIWYTKNMVKRL 139 (261)
T ss_pred HHHHHHHhcCCEEEEEeecCccccccCC--------cCCCcCCCCCcCCCCCC--cccCchHHHHHHHHHHH
Confidence 8899999999999999999999996653 88999999999996443 33567766666666554
No 93
>KOG3641|consensus
Probab=99.58 E-value=4.6e-15 Score=157.93 Aligned_cols=169 Identities=19% Similarity=0.271 Sum_probs=143.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHH
Q psy8322 23 MSFGNYHNYDLMREELENFTRVYA--NMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILR 100 (651)
Q Consensus 23 ~~~~~y~~~~ei~~~l~~l~~~~p--~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~ 100 (651)
+.|...+||..|.-+|..|+...+ -+.+...++.|..||++.+++|+.. .-..+|.|++.+.+|++|.-+.+++..
T Consensus 374 faYhypyTy~~l~~hLn~les~~~~~~yfr~dVl~~tl~g~~~~l~tI~~a--e~~~~~~IfLSaRVHpgeTnsSwvmkG 451 (650)
T KOG3641|consen 374 FAYHYPYTYSQLQCHLNGLESPKNPAFYFRYDVLLFTLVGRAMALATIDMA--ECAPRPVIFLSARVHPGETNSSWVMKG 451 (650)
T ss_pred EeeccCccHHHHHhhhhcccCCCCcCcccchheeeeeecCCccceEEeeHh--hcCCcceEEEecccCCCCCcHHHHHHH
Confidence 678888999999999999987555 3678889999999999999999932 234689999999999999999999999
Q ss_pred HHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCC
Q psy8322 101 LLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTS 180 (651)
Q Consensus 101 ~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~ 180 (651)
+++.|+. .++....|.+.+.|.|+||+||||.-... .|..-.|.||||.|. -|.
T Consensus 452 ilefl~s----~~p~aq~LRe~~vFKI~PMLNPDGV~~Gn--------yRCSL~G~DLNR~w~--------------tps 505 (650)
T KOG3641|consen 452 ILEFLVS----NSPLAQGLRESYVFKIVPMLNPDGVIVGN--------YRCSLMGLDLNRMWS--------------TPS 505 (650)
T ss_pred HHHHhhc----CCcHHHhhhhheeEecccccCCCceeccc--------ceeccccchhhhhcC--------------CCC
Confidence 9999996 47788889999999999999999998654 588899999999996 356
Q ss_pred CCCcHHHHHHHHHHHhC------CcEEEEEEecCceee-eeccccc
Q psy8322 181 QSIDPEVQAVIDWMNSV------PFVMSLQLHGGNVVA-SYPYDSF 219 (651)
Q Consensus 181 ~~sepEt~al~~~~~~~------~~~~~i~~H~~~~~~-~~P~~~~ 219 (651)
+.+.|+..+.++++... ++.+++|+||.++.+ .|=||..
T Consensus 506 ~~shPsi~~~k~li~~l~~~~~~~p~~Y~DlHgHSqK~n~FvYGnv 551 (650)
T KOG3641|consen 506 PASHPSIYAVKQLIQQLSNVPHSRPLGYVDLHGHSQKVNHFVYGNV 551 (650)
T ss_pred cccchhHHhHHHHHhhhhcccccCceEeecccccccccceEEecCc
Confidence 77999999999988875 488999999987753 2344554
No 94
>cd06232 Peptidase_M14-like_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.57 E-value=4.2e-15 Score=145.02 Aligned_cols=108 Identities=22% Similarity=0.182 Sum_probs=85.3
Q ss_pred CCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCcee
Q psy8322 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL 375 (651)
Q Consensus 296 egr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~ 375 (651)
|||+|++|+|+ .+||.||++||+|||||+|.+.++++++.|++ +++++|+|+|++|||||++
T Consensus 25 EGR~I~~l~i~------~~Kp~I~I~gGvHarEwig~~~al~fi~~L~~------------~~~~n~~I~P~vNPDGYe~ 86 (240)
T cd06232 25 QGRPVTGRYVA------GLDHPVVISAGQHANETSGVVGALRAAEALAA------------RPGAHFALIPLENPDGYAL 86 (240)
T ss_pred CCCeeeEEEec------CCCcEEEEeCCcCCCcchhHHHHHHHHHHHhc------------cCCceEEEEEeeCCcHHHh
Confidence 99999999992 26899999999999999999999999999985 5789999999999999998
Q ss_pred eecccccCCC--------CCCCceeEeec-cCCCCCCCCCCCCCChHHHHHHHHHh-hccCCCCcC
Q psy8322 376 AVEGNCRSGR--------GRTPPFLISLF-LPFPVTKNKPALTPDTDVFLHLASTY-ARLHPTMHM 431 (651)
Q Consensus 376 ~~~~~~~~~k--------gr~~~~gvdln-rnf~~~~~~~~~~~~~~~f~~l~~~~-a~~~~~~~~ 431 (651)
.. ++||- .|.++.|.|+| |.+.. .++.+..+.+...+ ...|-.+|+
T Consensus 87 ~~---~L~r~nP~~~hHaaR~~A~g~D~~fr~~~~-------~~Es~~~~~~~~~~~~~~hiDlHe 142 (240)
T cd06232 87 HE---RLRAEHPRHMHHAARYTALGDDLEYREFPP-------FGEREARHQALAKSGAQLHVNLHG 142 (240)
T ss_pred hc---hhhccCcccccchhhhcccCCCcccccCCc-------chHHHHHHHHHHhhCCcEEEECCC
Confidence 54 34432 36778888888 74422 47778888887766 233334433
No 95
>cd06231 Peptidase_M14-like_4 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=99.54 E-value=1.4e-14 Score=145.64 Aligned_cols=101 Identities=25% Similarity=0.344 Sum_probs=84.8
Q ss_pred CCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCcee
Q psy8322 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL 375 (651)
Q Consensus 296 egr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~ 375 (651)
++++|+++++.+. ++++|.|++.||+||+||.|.++++++++.+... ++++.+|+|+|++||||++.
T Consensus 26 ~~~pL~~l~~~~~---~~~~p~vlI~gGiHG~E~~G~~a~l~~l~~l~~~----------~l~~~~i~ivP~vNPdG~~~ 92 (236)
T cd06231 26 QSYPLYALKSRGW---DSDLPRVLITAGIHGDEPAGPLGALEFLRAAALE----------LAQDVNLSVYPCINPSGFEA 92 (236)
T ss_pred CCeeEEEEEcCCC---CCCCCEEEEECCCCCCcHHHHHHHHHHHHHHHHH----------HhcCCeEEEEECcChhHHhc
Confidence 5999999999643 3478999999999999999999999999988642 68899999999999999987
Q ss_pred eecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322 376 AVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY 422 (651)
Q Consensus 376 ~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~ 422 (651)
.. |.|..|+||||+|+.. .++|+...+..+....
T Consensus 93 ~~---------R~n~~g~DLNR~F~~~----~~~~E~~al~~~~~~~ 126 (236)
T cd06231 93 IT---------RWNRNGIDPNRSFRSE----SPSPEVRLLMEWLRRL 126 (236)
T ss_pred Cc---------cCCCCCccccCCCCCC----CCCHHHHHHHHHHHHh
Confidence 44 6778899999999873 3467887777776554
No 96
>cd00596 Peptidase_M14_like The M14 family of metallocarboxypeptidases (MCPs) are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring
Probab=99.53 E-value=1.1e-14 Score=143.53 Aligned_cols=168 Identities=35% Similarity=0.523 Sum_probs=131.6
Q ss_pred EEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCcee-eecccccCCCCCCCceeEeec
Q psy8322 318 VKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL-AVEGNCRSGRGRTPPFLISLF 396 (651)
Q Consensus 318 v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~-~~~~~~~~~kgr~~~~gvdln 396 (651)
|++.|++||+|++|.+++++++++|+..+.. .+.|+++.+|+|+|++||||+++ .+ |.+..|+|||
T Consensus 1 v~i~ag~Hg~E~~g~~~~~~~~~~l~~~~~~----~~~l~~~~~i~iiP~~NPdG~~~~~~---------R~n~~g~DlN 67 (196)
T cd00596 1 VLIIAGIHGNETIGVEAALALLRRLLSNYGR----DTKLLENGRLLVVPVLNPDGYEAVNW---------RKNANGVDLN 67 (196)
T ss_pred CEEECCcCCCcHHHHHHHHHHHHHHHHcCcc----hHHHHhCCeEEEEeCcccccceeeeE---------EeCCCCcCcc
Confidence 6899999999999999999999999998743 27899999999999999999999 44 5566699999
Q ss_pred cCCCCCCC-CCCCCCChHHHHHHHHHh-hccCCCCcCC-----CCCCCCc------------cc-------cccCcceec
Q psy8322 397 LPFPVTKN-KPALTPDTDVFLHLASTY-ARLHPTMHMK-----RPCPGNT------------VL-------KFENGVTNG 450 (651)
Q Consensus 397 rnf~~~~~-~~~~~~~~~~f~~l~~~~-a~~~~~~~~~-----~~~~~~~------------~~-------~~~~gi~n~ 450 (651)
||||..+. .....|+...+..+...+ ......+|.. -++.... .. ....+....
T Consensus 68 R~f~~~~~~~~~~~~e~~~~~~~~~~~~~~~~idlH~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 147 (196)
T cd00596 68 RNFPGLWGKGPLSEPETRALAELIQQRKVDLYIDLHSGSLGVLYPYSHSDTPPPDAEIPKALAQLLADAARGSKYGVGFG 147 (196)
T ss_pred CCCCCcccCCCCCcHHHHHHHHHHHhCCceEEEEEecCCceEEecCCCCCCCCCCHHHHHHHHHHHHHhccCCCCceeec
Confidence 99998865 556788999999888876 2222222221 0111000 00 012355566
Q ss_pred cceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchHH
Q psy8322 451 AAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNA 498 (651)
Q Consensus 451 ~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~a 498 (651)
..||+..|++.||+|...+++++|+|+++++.|+.+.+...|++|+..
T Consensus 148 ~~~~~~~g~~~d~~~~~~~~~~~tiE~g~~~~~~~~~~~~~~~~~~~~ 195 (196)
T cd00596 148 AKWYETGGGFDDWAYGNHGCPSFTIELGGQGYPPEEELPSRGEENKEA 195 (196)
T ss_pred ceEEEcCCchhhhhhhCCCcEEEEEEeCCCCCCCHHHHHHHHHHHHhh
Confidence 667999999999999888999999999999999889999999988764
No 97
>cd06906 M14_Nna1 Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the mouse Nna1/CCP-1, and -4 proteins, and the human Nna1/AGTPBP-1 protein. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. Mutations in Nna
Probab=99.51 E-value=5.5e-14 Score=142.27 Aligned_cols=113 Identities=19% Similarity=0.209 Sum_probs=90.4
Q ss_pred CCcceEEEEeeCCCcc--------CCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEec
Q psy8322 296 ESKDLLVVNISTAPVH--------QLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPN 367 (651)
Q Consensus 296 egr~i~~l~is~~~~~--------~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~ 367 (651)
+||++.+|+|++.+.. -..||.||+.|.+|++|..|.-++.-++++|+. .|+..+.|+++++|+||||
T Consensus 25 ~G~~v~lltIt~~~~~~~~~~~~~~~~kp~I~I~ARvHPgEt~~Swi~~g~l~~L~~----~d~~a~~Lr~~~~f~IvPm 100 (278)
T cd06906 25 GGNSCPLLTITAMPESNYYEHICQFRNRPYIFLSARVHPGETNASWVMKGTLEFLMS----SSPTAQSLRESYIFKIVPM 100 (278)
T ss_pred CCCceeEEEEeCCCccccccccccccCCcEEEEEcccCCCcchHHHHHHHHHHHHhC----CCHHHHHHHHhCcEEEEee
Confidence 8999999999985421 147999999999999998888888888888774 2799999999999999999
Q ss_pred cCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322 368 LNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY 422 (651)
Q Consensus 368 ~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~ 422 (651)
+||||+.+.+ .|.+..|+||||+|.... +...|+....+.|....
T Consensus 101 lNPDGvv~Gn--------~Rc~~~G~DLNR~w~~p~--~~~~P~i~~~k~l~~~l 145 (278)
T cd06906 101 LNPDGVINGN--------HRCSLSGEDLNRQWQSPN--PELHPTIYHTKGLLQYL 145 (278)
T ss_pred ecCccceecc--------cccCCCCCCCCCCCCCCC--cccChHHHHHHHHHHHH
Confidence 9999998665 478889999999997432 22346655566555544
No 98
>PF13715 DUF4480: Domain of unknown function (DUF4480)
Probab=99.43 E-value=1.1e-12 Score=111.74 Aligned_cols=86 Identities=21% Similarity=0.254 Sum_probs=74.1
Q ss_pred ceeEEEEcC-CCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeCCCceEEEEEEeeee
Q psy8322 509 GVKGLVLDE-TGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAVLESLL 587 (651)
Q Consensus 509 ~i~G~V~D~-~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~~~~~~~~~L~~~~ 587 (651)
.|+|+|+|+ +|+||++|+|.+.+.+.++.||++|.|.+.+++|.|+|.+|++||++.+..+.+..+....+++.|.+..
T Consensus 1 ti~G~V~d~~t~~pl~~a~V~~~~~~~~~~Td~~G~F~i~~~~g~~~l~is~~Gy~~~~~~i~~~~~~~~~~~i~L~~~~ 80 (88)
T PF13715_consen 1 TISGKVVDSDTGEPLPGATVYLKNTKKGTVTDENGRFSIKLPEGDYTLKISYIGYETKTITISVNSNKNTNLNIYLEPKS 80 (88)
T ss_pred CEEEEEEECCCCCCccCeEEEEeCCcceEEECCCeEEEEEEcCCCeEEEEEEeCEEEEEEEEEecCCCEEEEEEEEeeCc
Confidence 389999995 5999999999999999999999999996669999999999999999999988886655456899999877
Q ss_pred eeeEEEE
Q psy8322 588 EFNITMT 594 (651)
Q Consensus 588 ~~~~~v~ 594 (651)
.++.+|.
T Consensus 81 ~~L~eVv 87 (88)
T PF13715_consen 81 NQLDEVV 87 (88)
T ss_pred ccCCeEE
Confidence 6655543
No 99
>cd06233 Peptidase_M14-like_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.42 E-value=2.4e-12 Score=131.65 Aligned_cols=117 Identities=30% Similarity=0.318 Sum_probs=89.8
Q ss_pred CCHHHHHHHHHHHHHHcCCcEEEEEe---ccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCC-hhHHHHHHHHHHH
Q psy8322 29 HNYDLMREELENFTRVYANMTELYSI---GKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDE-PIGREIILRLLEH 104 (651)
Q Consensus 29 ~~~~ei~~~l~~l~~~~p~~~~~~~i---G~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E-~~g~~~~l~~~~~ 104 (651)
.+|+|-.+.+.+.++...-.++-+.+ |..-+--+|+++.|+.. ...|.+++++|+||.| .+|+.+++.+++.
T Consensus 3 ~sY~eAR~kFl~aA~~aga~~~~~~~~~~gp~g~~l~i~v~~~g~~----~~~~~l~i~sGvHG~Eg~~Gs~~~~~ll~~ 78 (283)
T cd06233 3 QSYAEAREKFLAAAKAAGAALESYVHPLLGPDGEALAIDVARLGPA----DAKRLLVITSGTHGVEGFCGSAIQLALLRE 78 (283)
T ss_pred ccHHHHHHHHHHHHHHcCccceeeeccCCCCCCceeeeeEEEEcCC----CCCcEEEEEecccCCcccchHHHHHHHHHh
Confidence 47899988888888765544333333 33223336888998864 2356999999999999 7999999998887
Q ss_pred HHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccC
Q psy8322 105 LVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFR 167 (651)
Q Consensus 105 L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~ 167 (651)
+.. +.+..++.|.+||++||.|+...+ |.|.+||||||||-+...
T Consensus 79 ~~~---------~~~~~~~~vi~vh~vNP~Gf~~~~---------R~nedgvDLNRnf~d~~~ 123 (283)
T cd06233 79 LLP---------RSLPAGVAVLLVHALNPYGFAHLR---------RVNENNVDLNRNFLDFSA 123 (283)
T ss_pred cch---------hhccCCceEEEEeCcCHHHHhhcc---------cCCCCCCChhhcccccCC
Confidence 753 245668899999999999998654 889999999999966543
No 100
>COG2866 Predicted carboxypeptidase [Amino acid transport and metabolism]
Probab=99.30 E-value=5.9e-12 Score=134.65 Aligned_cols=131 Identities=31% Similarity=0.453 Sum_probs=94.5
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHcCC-cEEEEEeccccCCc-eEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHH
Q psy8322 19 PAAGMSFGNYHNYDLMREELENFTRVYAN-MTELYSIGKSVLGK-DLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGRE 96 (651)
Q Consensus 19 ~~~~~~~~~y~~~~ei~~~l~~l~~~~p~-~~~~~~iG~S~egr-~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~ 96 (651)
+...+.++.-...++....+.......+. .+.+..+|+|++|| ++++.+-..+ ..++.+++.+++|++ |..
T Consensus 90 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~sv~GR~~~~i~~~~~~----~~~~~i~~~~~~H~~---g~~ 162 (374)
T COG2866 90 PASFMTFTLAPEEGRVEFAFFEPYSLEQHLLVELELIGRSVEGRDDPLITFPESN----PEHKTILITAGQHAR---GEK 162 (374)
T ss_pred CcccchhhhcccchhhHHhhcccccccccccceeeecCccccccccceeeecCCC----CccceeeEecccccC---ccH
Confidence 34444554433333333333333222222 56788999999999 6665555554 457999999999996 555
Q ss_pred HHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCc
Q psy8322 97 IILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPD 164 (651)
Q Consensus 97 ~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~ 164 (651)
.+..++..|+..|...+..++.+++++.++++|.+||||+++.+ .|.|+.|+||||+|+.
T Consensus 163 ~~~~~~~~li~r~~~~~~~~~~lld~~~~~vvp~~NpDG~~~~~--------lr~na~~~dLnr~~~~ 222 (374)
T COG2866 163 MVEWFLYNLILRYLDPDVQVRKLLDRADLHVVPNVNPDGSDLGN--------LRTNANGVDLNRNFIA 222 (374)
T ss_pred HHHHHHHHHHHHhcCccchhhhhhccccEEEecccCCchhhhcc--------cccccCccchhhhccC
Confidence 66666666666663445789999999999999999999999987 5899999999999963
No 101
>cd06250 M14_PaAOTO_like An uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the the M14 family of metallocarboxypeptidases. This subgroup includes Pseudomonas aeruginosa AotO and related proteins. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD. The gene encoding
Probab=99.29 E-value=1.6e-11 Score=131.48 Aligned_cols=97 Identities=29% Similarity=0.385 Sum_probs=70.9
Q ss_pred eccccCC--ceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEecc
Q psy8322 54 IGKSVLG--KDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNL 131 (651)
Q Consensus 54 iG~S~eg--r~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~ 131 (651)
++++..| +.|++.+|.... ..|+|+|.|++||+|+.|.+++.++++.|.... .+ ..| +-+|++||++
T Consensus 5 ~~~~~~g~~~~ipv~~~~g~~----~gp~v~i~agiHGdE~~G~~~~~~L~~~l~~~~--~~----~~l-~G~v~ivP~~ 73 (359)
T cd06250 5 LPSPAPGTERELTVFRFGGAG----AGPKVYIQASLHADELPGMLVLHHLIELLKKLE--AE----GRI-LGEITLVPVA 73 (359)
T ss_pred cccCCCCCeEEEEEEEEeCCC----CCCEEEEEeccccCchHHHHHHHHHHHHHhhhc--cc----ccc-CceEEEEeCc
Confidence 4554444 578888887531 259999999999999999999999999998631 11 113 4479999999
Q ss_pred CcccccccccccccCCCCCC-CccCcCCCCCCCc
Q psy8322 132 NPDGSELAVEGNCRSGRGRN-NINNHDLNRQFPD 164 (651)
Q Consensus 132 NPDG~~~~~~~~r~~~~~r~-n~~GvDLNRnf~~ 164 (651)
||+|++..... ...+|. ...|.||||.||.
T Consensus 74 Np~g~~~~~~~---~~~~R~~p~dg~dlNR~FPg 104 (359)
T cd06250 74 NPIGLNQRLGG---FHLGRFDLASGTNFNRDFPD 104 (359)
T ss_pred ChHHHHhhccc---cccccccCCCCCccCcCCCC
Confidence 99999753211 112353 4589999999994
No 102
>PF13620 CarboxypepD_reg: Carboxypeptidase regulatory-like domain; PDB: 3MN8_D 3P0D_I 3KCP_A 2B59_B 1UWY_A 1H8L_A 1QMU_A 2NSM_A.
Probab=99.24 E-value=2.7e-11 Score=101.63 Aligned_cols=76 Identities=22% Similarity=0.438 Sum_probs=59.5
Q ss_pred ceeEEEEcCCCCcccceEEEEee----eeeeeeeCCCeeE-EeeccCceEEEEEEEeeeeeEEE-EEEeeCCCceEEEEE
Q psy8322 509 GVKGLVLDETGSRLANVSISLAY----KNVSFMSSQRGEY-WRVLMPGIYFIEASKEGYELFRD-RIKIPESTSPVVGAV 582 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~----~~~~~~Td~~G~f-~~~l~~g~y~l~vs~~Gy~~~~~-~v~v~~~~~~~~~~~ 582 (651)
.|+|+|+|++|+||++|.|.+.+ ....+.||.+|.| +..+++|.|+|.+++.||.+... .+.+..++...++|.
T Consensus 1 tI~G~V~d~~g~pv~~a~V~l~~~~~~~~~~~~Td~~G~f~~~~l~~g~Y~l~v~~~g~~~~~~~~v~v~~~~~~~~~i~ 80 (82)
T PF13620_consen 1 TISGTVTDATGQPVPGATVTLTDQDGGTVYTTTTDSDGRFSFEGLPPGTYTLRVSAPGYQPQTQENVTVTAGQTTTVDIT 80 (82)
T ss_dssp -EEEEEEETTSCBHTT-EEEET--TTTECCEEE--TTSEEEEEEE-SEEEEEEEEBTTEE-EEEEEEEESSSSEEE--EE
T ss_pred CEEEEEEcCCCCCcCCEEEEEEEeeCCCEEEEEECCCceEEEEccCCEeEEEEEEECCcceEEEEEEEEeCCCEEEEEEE
Confidence 38999999999999999999983 3457889999999 55699999999999999999997 688888877788888
Q ss_pred Ee
Q psy8322 583 LE 584 (651)
Q Consensus 583 L~ 584 (651)
|+
T Consensus 81 L~ 82 (82)
T PF13620_consen 81 LE 82 (82)
T ss_dssp EE
T ss_pred EC
Confidence 85
No 103
>cd06230 M14_ASTE_ASPA_like The Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily belongs to the M14 family of metallocarboxypeptidases (MCPs), and includes ASTE, which catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) which cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.17 E-value=5.4e-11 Score=121.83 Aligned_cols=103 Identities=30% Similarity=0.367 Sum_probs=77.1
Q ss_pred EEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCC
Q psy8322 81 VKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNR 160 (651)
Q Consensus 81 v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNR 160 (651)
|+|+||+||+|..|.+++..|++.+... . .-+.+++++|++||+|++... |.+. .||||
T Consensus 1 v~i~agiHG~E~~g~~~~~~l~~~~~~~---------~-~l~g~v~~vp~~N~~g~~~~~---------R~~~--~DLNR 59 (252)
T cd06230 1 VAVVGGVHGNEPCGVQAIRRLLAELDEG---------Q-ALRGPVKLVPAANPLALEAGQ---------RYLD--RDLNR 59 (252)
T ss_pred CEEEcccCCCcHHHHHHHHHHHHHHhhh---------c-ccccEEEEEeCcCHHHHHhCC---------CCCC--cCCCC
Confidence 5799999999999999999999988652 0 235678999999999998643 5554 99999
Q ss_pred CCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCC--cEEEEEEecCceeeeeccccc
Q psy8322 161 QFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVP--FVMSLQLHGGNVVASYPYDSF 219 (651)
Q Consensus 161 nf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~~--~~~~i~~H~~~~~~~~P~~~~ 219 (651)
+||- ......+|.+....+.+... .++.||+|++.. ...|+...
T Consensus 60 ~fpg--------------~~~~~~~~~~~a~~l~~~i~~~~d~~iDlH~~~~-~~~~~~~~ 105 (252)
T cd06230 60 IFPG--------------DPDSGTYEDRLAAELCPELEGLADAVLDLHSTSS-EGPPFILV 105 (252)
T ss_pred CCCC--------------CCCCCCHHHHHHHHHHHHHhhhccEEEECCCCCC-CCCCEEEE
Confidence 9993 11114566666666665553 699999999876 55666554
No 104
>cd06251 M14_ASTE_ASPA_like_1 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.15 E-value=5.3e-11 Score=124.07 Aligned_cols=118 Identities=25% Similarity=0.259 Sum_probs=81.0
Q ss_pred EEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccc
Q psy8322 63 LLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG 142 (651)
Q Consensus 63 i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~ 142 (651)
|+++.|... ...|.++|+||+||+|+.|..++..+++.|... ..+-+++++|++||.|++...
T Consensus 9 ~pv~~~~g~----~~gp~v~i~~giHGdE~~G~~~~~~l~~~l~~~-----------~~~g~v~~vp~~Np~a~~~~~-- 71 (287)
T cd06251 9 IPVHVIRGK----KPGPTLLLTAAIHGDELNGVEIIRRLLRQLDPK-----------TLRGTVIAVPVVNVFGFLNQS-- 71 (287)
T ss_pred eeEEEEeCC----CCCCEEEEEcCccCCchhHHHHHHHHHhcCCcc-----------cCceEEEEEeCCCHHHHHhcc--
Confidence 566666543 124899999999999999999998887776321 123478899999999998643
Q ss_pred cccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC--CcEEEEEEecCce-eeeeccccc
Q psy8322 143 NCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV--PFVMSLQLHGGNV-VASYPYDSF 219 (651)
Q Consensus 143 ~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~--~~~~~i~~H~~~~-~~~~P~~~~ 219 (651)
|.+..|.||||+||-.. ..++|.+....+++.. ..++.||+|++.. .-..||.+.
T Consensus 72 -------R~~~d~~dlNR~fpg~~---------------~g~~~~~~a~~i~~~~~~~~d~~iDlHs~~~~~~~~~~v~~ 129 (287)
T cd06251 72 -------RYLPDRRDLNRSFPGSK---------------NGSLASRIAHLFFTEILSHADYGIDLHTGAIGRTNLPQIRA 129 (287)
T ss_pred -------ccCCCccCHhhcCCCCC---------------CCCHHHHHHHHHHHHHHhhCCEEEEcCCCCCCCCccceEEE
Confidence 66668999999998321 2234434333333333 3899999999863 234555543
No 105
>cd06254 M14_ASTE_ASPA_like_4 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.15 E-value=8.9e-11 Score=122.49 Aligned_cols=120 Identities=18% Similarity=0.213 Sum_probs=84.7
Q ss_pred eEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCccccccccc
Q psy8322 62 DLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVE 141 (651)
Q Consensus 62 ~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~ 141 (651)
.|++..|... ...|.++|+||+||+|+.|..++..|++.|-. . .-+.+++++|++||.|++...
T Consensus 5 ~~pv~~~~g~----~~gp~v~i~agvHG~E~~G~~~~~~l~~~l~~-------~----~~~g~v~~vp~~N~~a~~~~~- 68 (288)
T cd06254 5 AIPVTLINGV----NPGPTLAITAGVHGGEYPGIQALQKLAREIDP-------A----KLSGTLIIVHVLNLSGFYART- 68 (288)
T ss_pred cccEEEEeCC----CCCCEEEEEecccCCchhHHHHHHHHHHhCCc-------c----cCeEEEEEEeCcCHHHHHhcC-
Confidence 4566666543 13489999999999999999999888877632 1 125579999999999998532
Q ss_pred ccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC---CcEEEEEEecCc-eeeeeccc
Q psy8322 142 GNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV---PFVMSLQLHGGN-VVASYPYD 217 (651)
Q Consensus 142 ~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~---~~~~~i~~H~~~-~~~~~P~~ 217 (651)
|......|.||||+||-.+ .. .+++.+..++.+. +.++.||+|+++ ...+.||.
T Consensus 69 ------r~~~~~d~~dlNR~fpg~~--------------~g--~~~~r~a~~~~~~~~~~~d~~iDlHs~~~~~~~~p~~ 126 (288)
T cd06254 69 ------PYIVPEDGKNLNRVFPGDK--------------DG--TLTERIAYFLTEEVIDKADFLIDLHSGDGNEQLRPYV 126 (288)
T ss_pred ------cccCCCCCCchhhcCCCCC--------------CC--CHHHHHHHHHHHHHHhhCcEEEECCCCCCccccCceE
Confidence 1234568999999999422 11 2345555555432 578999999975 44567776
Q ss_pred cc
Q psy8322 218 SF 219 (651)
Q Consensus 218 ~~ 219 (651)
+.
T Consensus 127 ~~ 128 (288)
T cd06254 127 YY 128 (288)
T ss_pred Ee
Confidence 64
No 106
>cd06255 M14_ASTE_ASPA_like_5 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.14 E-value=1.9e-10 Score=120.24 Aligned_cols=120 Identities=24% Similarity=0.304 Sum_probs=81.8
Q ss_pred ccccCCce--EEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccC
Q psy8322 55 GKSVLGKD--LLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLN 132 (651)
Q Consensus 55 G~S~egr~--i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~N 132 (651)
++...|.+ |+++.|.... ..|.++|+|++||+|..|.+++..+++.|... .+ +-++.++|++|
T Consensus 3 ~~~~~g~~~~~pv~~~~g~~----~gp~v~i~agvHG~E~~G~~~~~~l~~~l~~~----------~~-~g~~~~vp~~N 67 (293)
T cd06255 3 GTMADGSAVALPVTILRGAE----PGPTLWLHAQVHGNEYNGTQAIVDLYRSLDPA----------AL-KGRLVALPTAN 67 (293)
T ss_pred ccCCCCCccceeEEEEeCCC----CCCEEEEEcccCCCcHHHHHHHHHHHHhCCHh----------hc-CCeEEEEeCcC
Confidence 44445553 6677776532 24899999999999999999999998887431 12 34778999999
Q ss_pred cccccccccccccCCCCCCCc-cCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCcee
Q psy8322 133 PDGSELAVEGNCRSGRGRNNI-NNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVV 211 (651)
Q Consensus 133 PDG~~~~~~~~r~~~~~r~n~-~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~ 211 (651)
|+|+.... |.+. .+.||||.||-.= ....++..+.++.+.+. ...++.||+|+++..
T Consensus 68 ~~a~~~~~---------R~~p~d~~dlNR~fpg~~------------~g~~~~r~A~~~~~~~~-~~~d~~iDlHs~~~~ 125 (293)
T cd06255 68 PTALDART---------RMSPFDELDLNRTFPGNP------------NGMVTQQMAHALFEEVR-GVADYLVDLHTMTTI 125 (293)
T ss_pred HHHHHhhc---------ccCCCCCCCcccCCCCCC------------CCCHHHHHHHHHHHHHH-hcCCEEEECCCCCCC
Confidence 99998654 6665 8999999998210 00122233333322222 246899999998654
No 107
>cd06252 M14_ASTE_ASPA_like_2 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.99 E-value=1e-09 Score=115.95 Aligned_cols=118 Identities=25% Similarity=0.291 Sum_probs=82.9
Q ss_pred ceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccc
Q psy8322 61 KDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAV 140 (651)
Q Consensus 61 r~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~ 140 (651)
-.|++..|.... -|+|+|.||+||+|..|..++.++++.|... .-+-++.++|++||-|+....
T Consensus 22 ~~iPv~v~~g~~-----gp~v~I~aGiHGdE~~G~~~~~~L~~~l~~~-----------~l~G~vi~vP~~Np~a~~~~~ 85 (316)
T cd06252 22 VMIPITVIKNGD-----GPTVLLTGGNHGDEYEGQIALLRLARRLDPE-----------EVRGRVIILPALNFPAVQAGT 85 (316)
T ss_pred eEeeEEEEeCCC-----CCEEEEEccCCCCchHHHHHHHHHHHhCChh-----------hCeEEEEEEeCCCHHHHHhcc
Confidence 367777776531 4899999999999999999998888877431 124589999999999998543
Q ss_pred cccccCCCCCCCc-cCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC--CcEEEEEEecCceee-eecc
Q psy8322 141 EGNCRSGRGRNNI-NNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV--PFVMSLQLHGGNVVA-SYPY 216 (651)
Q Consensus 141 ~~~r~~~~~r~n~-~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~--~~~~~i~~H~~~~~~-~~P~ 216 (651)
|.+. .|.||||.||-. +..+.|.+.-..+.++. +.++.||+|++.... .+|+
T Consensus 86 ---------R~~p~D~~DLNR~Fpg~---------------~~gs~~~riA~~i~~~l~~~aD~~iDLHt~~~~~~~~p~ 141 (316)
T cd06252 86 ---------RTSPIDGGNLNRVFPGD---------------PDGTVTEMIAHYLTTELLPRADYVIDLHSGGRSLDFLPF 141 (316)
T ss_pred ---------ccCCCCCCcHHhhCCCC---------------CCCCHHHHHHHHHHHhhhhcCcEEEEccCCCCccccCCe
Confidence 6554 589999999932 12334433333333443 578999999985443 3365
Q ss_pred cc
Q psy8322 217 DS 218 (651)
Q Consensus 217 ~~ 218 (651)
..
T Consensus 142 ~~ 143 (316)
T cd06252 142 AL 143 (316)
T ss_pred EE
Confidence 54
No 108
>cd06253 M14_ASTE_ASPA_like_3 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.99 E-value=1.7e-09 Score=113.18 Aligned_cols=121 Identities=27% Similarity=0.312 Sum_probs=81.5
Q ss_pred eEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCccccccccc
Q psy8322 62 DLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVE 141 (651)
Q Consensus 62 ~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~ 141 (651)
.|..-+++.+ .|.++|+|++||+|..|..++.++++.|.... ....+.-+-++.++|++||.|+....
T Consensus 9 ~~~~~~~g~~------gp~v~i~agvHGdE~~G~~~~~~L~~~l~~~~-----~~~~~~l~g~v~~vP~~N~~a~~~~~- 76 (298)
T cd06253 9 RIEGFNFGGG------EKRICIVGGIHGDELQGLYICSLLIRFLKELE-----KRGPLKLNGIVDVIPSVNPLGLNLGT- 76 (298)
T ss_pred EEEeeecCCC------CcEEEEEccCccchHHHHHHHHHHHHHHhhhh-----cccccccCceEEEEeCcCHHHHHHhh-
Confidence 3555556532 58999999999999999999999999997631 00012236789999999999998543
Q ss_pred ccccCCCCCCC-ccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHh-C-CcEEEEEEecCcee-eeeccc
Q psy8322 142 GNCRSGRGRNN-INNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNS-V-PFVMSLQLHGGNVV-ASYPYD 217 (651)
Q Consensus 142 ~~r~~~~~r~n-~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~-~-~~~~~i~~H~~~~~-~~~P~~ 217 (651)
|.. ..|.||||.||-. . ..++ ++.+...+.+ . ..++.||+|++... ..+|+-
T Consensus 77 --------R~~p~d~~dlNR~Fpg~--------------~-~g~~-~~riA~~~~~~~~~~d~~iDLHsg~~~~~~~p~v 132 (298)
T cd06253 77 --------RFWPTDNSDINRMFPGD--------------P-QGET-TQRIAAAVFEDVKGADYCIDLHSSNIFLEEIPQV 132 (298)
T ss_pred --------CcCCCCCCcccccCCCC--------------C-CCcH-HHHHHHHHHHHhcCCCEEEEccCCCcccccCCeE
Confidence 544 3799999999931 1 1122 3333333333 2 47899999997543 224544
Q ss_pred c
Q psy8322 218 S 218 (651)
Q Consensus 218 ~ 218 (651)
+
T Consensus 133 ~ 133 (298)
T cd06253 133 R 133 (298)
T ss_pred E
Confidence 3
No 109
>TIGR02994 ectoine_eutE ectoine utilization protein EutE. Members of this family, part of the succinylglutamate desuccinylase / aspartoacylase family (pfam04952), belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it the operon is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida.
Probab=98.93 E-value=2.9e-09 Score=112.42 Aligned_cols=116 Identities=23% Similarity=0.362 Sum_probs=81.6
Q ss_pred eEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCccccccccc
Q psy8322 62 DLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVE 141 (651)
Q Consensus 62 ~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~ 141 (651)
.|++..|..+ .-|+++|.|++||+|+.|..++..|++.|-.. .-+-++++||++||-|+....
T Consensus 36 ~ipv~vi~~~-----~gp~v~i~agvHGdE~~G~~~~~~L~~~l~~~-----------~l~G~v~~vP~~N~~g~~~~~- 98 (325)
T TIGR02994 36 MIPITVIKNG-----IGPTALLTGGNHGDEYEGPIALFELARTLDAE-----------DVSGRIIIVPAMNYPAFRAGT- 98 (325)
T ss_pred EeeEEEEeCC-----CCCEEEEEeccCCCchHHHHHHHHHHhhCChh-----------hCcEEEEEEcCCCHHHHHhhC-
Confidence 4555555432 23899999999999999999999888877431 124579999999999997543
Q ss_pred ccccCCCCCCC-ccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHH-hC--CcEEEEEEecCce-eeeecc
Q psy8322 142 GNCRSGRGRNN-INNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMN-SV--PFVMSLQLHGGNV-VASYPY 216 (651)
Q Consensus 142 ~~r~~~~~r~n-~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~-~~--~~~~~i~~H~~~~-~~~~P~ 216 (651)
|.+ ..|.||||.|| |. +..+. ++.+...+. +. ..++.||+|+++. .-.+||
T Consensus 99 --------r~~p~d~~nlNR~fP--------------G~-~~gs~-~~riA~~l~~~l~~~aD~~iDlHs~~~~~~~~P~ 154 (325)
T TIGR02994 99 --------RTSPIDRGNLNRSFP--------------GR-PDGTV-TEKIADYFQRHLLPLADIVLDFHSGGKTLDFVPF 154 (325)
T ss_pred --------CCCCCCCCccCCCCC--------------CC-CCCCH-HHHHHHHHHHhHHhhCCEEEECCCCCccccccce
Confidence 444 37999999999 22 22333 556666663 32 5889999998865 234554
Q ss_pred cc
Q psy8322 217 DS 218 (651)
Q Consensus 217 ~~ 218 (651)
..
T Consensus 155 v~ 156 (325)
T TIGR02994 155 AA 156 (325)
T ss_pred EE
Confidence 43
No 110
>PF10994 DUF2817: Protein of unknown function (DUF2817); InterPro: IPR021259 This family of proteins has no known function.
Probab=98.92 E-value=1.2e-08 Score=107.70 Aligned_cols=114 Identities=27% Similarity=0.273 Sum_probs=89.3
Q ss_pred CCHHHHHHHHHHHHHHcCCcEEEEEe---ccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCC-hhHHHHHHHHHHH
Q psy8322 29 HNYDLMREELENFTRVYANMTELYSI---GKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDE-PIGREIILRLLEH 104 (651)
Q Consensus 29 ~~~~ei~~~l~~l~~~~p~~~~~~~i---G~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E-~~g~~~~l~~~~~ 104 (651)
.+|++-.+.+.+.++.....++-+.+ |..-|.--+.++.++... .+..+++++|.||=| ..|+.+.+.+++.
T Consensus 3 ~sY~~AR~~Fl~aA~~~ga~~~~~~~p~~G~~ge~L~~Dva~lg~~~----a~~lLv~~SGtHGVEGf~GSaiQ~~~L~~ 78 (341)
T PF10994_consen 3 QSYAEARERFLAAAEAAGAKLESYPHPLRGPDGEDLATDVAWLGPKD----ASRLLVLTSGTHGVEGFAGSAIQIALLRE 78 (341)
T ss_pred ccHHHHHHHHHHHHHHcCCcceeeeCCCCCCCCCcceeEEEEecCCC----CCeEEEEEecCCcccccccHHHHHHHHHc
Confidence 48999999888888887765444443 333334466778888642 346889999999999 8888888888887
Q ss_pred HHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCc
Q psy8322 105 LVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPD 164 (651)
Q Consensus 105 L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~ 164 (651)
+.. ..+.+++.+.+|-.+||-|+.+.+ |.|..+|||||||-.
T Consensus 79 ~~~---------~~~~~~~avllVHAlNPyGfa~~R---------R~nE~NVDLNRNfld 120 (341)
T PF10994_consen 79 DLA---------RSLPAGVAVLLVHALNPYGFAWLR---------RVNENNVDLNRNFLD 120 (341)
T ss_pred ccc---------cccCCCCeEEEEEccCccccceee---------ccCCcCcCcccccCc
Confidence 632 456778999999999999999876 999999999999973
No 111
>PF04952 AstE_AspA: Succinylglutamate desuccinylase / Aspartoacylase family; InterPro: IPR007036 This family describes both succinylglutamate desuccinylase that catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway and also includes aspartoacylase 3.5.1.15 from EC which cleaves acylaspartate into a fatty acid and aspartate. Mutations in P45381 from SWISSPROT lead to Canavan disease [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0008152 metabolic process; PDB: 3CDX_A 3FMC_A 3NA6_A 2BCO_B 3B2Y_A 3LWU_A 3IEH_A 2QVP_B 2G9D_A 1YW4_A ....
Probab=98.91 E-value=1.3e-09 Score=114.22 Aligned_cols=113 Identities=23% Similarity=0.287 Sum_probs=79.3
Q ss_pred CeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCc-cCcC
Q psy8322 79 PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNI-NNHD 157 (651)
Q Consensus 79 ~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~-~GvD 157 (651)
|.++|+||+||+|+.|..++..+++.|-..- -.-+++++|++||.|+.... |... .|.|
T Consensus 3 p~l~i~agvHGnE~~G~~a~~~L~~~l~~~~-----------~~G~~~~vp~~N~~a~~~~~---------R~~~~d~~d 62 (292)
T PF04952_consen 3 PTLLITAGVHGNEYNGIEALQRLLRELDPAD-----------LSGTVIIVPVANPPAFRQGT---------RFVPIDGRD 62 (292)
T ss_dssp -EEEEEE-SSTTBCHHHHHHHHHHHHHHGGG-----------CTCEEEEEEESSHHHHHHTS---------SSSTTTSSB
T ss_pred CEEEEEcCcccChHHHHHHHHHHHhcchhcc-----------cCCceEEEEEeCHHHHHhcc---------ccCCCCCCC
Confidence 8999999999999999999999988885420 34579999999999999654 5444 8999
Q ss_pred CCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC---CcEEEEEEecCceee-eecccc
Q psy8322 158 LNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV---PFVMSLQLHGGNVVA-SYPYDS 218 (651)
Q Consensus 158 LNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~---~~~~~i~~H~~~~~~-~~P~~~ 218 (651)
|||.||-...... .......-+++.+...+.+. +.++.||+|+++... .+|+..
T Consensus 63 LNR~Fpg~~~~~~-------~~~~~~~~~~~~ia~~l~~~~~~~aD~~iDLHs~~~~~~~~~~~~ 120 (292)
T PF04952_consen 63 LNRCFPGDALGSS-------LQEDYEATETERIAHALFEEILPDADYVIDLHSGSSSSDHPPFVR 120 (292)
T ss_dssp GGGSTTHHHHCHC-------TTHHHHHHHHHHHHHHHHHTTCCCGSEEEEEEEESSTBEEEEEEE
T ss_pred HHHhCCCCccccc-------cccccchhHHHHHHHHHhhhhhccceEEEEeccCCCCCccceEEE
Confidence 9999994332200 00011124677777777654 589999999876543 344443
No 112
>cd06250 M14_PaAOTO_like An uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the the M14 family of metallocarboxypeptidases. This subgroup includes Pseudomonas aeruginosa AotO and related proteins. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD. The gene encoding
Probab=98.84 E-value=4.2e-09 Score=112.84 Aligned_cols=96 Identities=25% Similarity=0.258 Sum_probs=73.7
Q ss_pred CCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCc
Q psy8322 294 YGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGS 373 (651)
Q Consensus 294 ~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~ 373 (651)
.|+.+.|.+.+|+... ..|+|+++|++||+|+.|.+++.++++.|...... . .| +-+|+++|++||+|+
T Consensus 10 ~g~~~~ipv~~~~g~~----~gp~v~i~agiHGdE~~G~~~~~~L~~~l~~~~~~--~----~l-~G~v~ivP~~Np~g~ 78 (359)
T cd06250 10 PGTERELTVFRFGGAG----AGPKVYIQASLHADELPGMLVLHHLIELLKKLEAE--G----RI-LGEITLVPVANPIGL 78 (359)
T ss_pred CCCeEEEEEEEEeCCC----CCCEEEEEeccccCchHHHHHHHHHHHHHhhhccc--c----cc-CceEEEEeCcChHHH
Confidence 3567889999996432 36999999999999999999999999999864321 1 13 337999999999999
Q ss_pred eeeecccccCCCCCCC-ceeEeeccCCCCCC
Q psy8322 374 ELAVEGNCRSGRGRTP-PFLISLFLPFPVTK 403 (651)
Q Consensus 374 ~~~~~~~~~~~kgr~~-~~gvdlnrnf~~~~ 403 (651)
.... +.+..+|.+ ..|.||||.||-+.
T Consensus 79 ~~~~---~~~~~~R~~p~dg~dlNR~FPg~~ 106 (359)
T cd06250 79 NQRL---GGFHLGRFDLASGTNFNRDFPDLA 106 (359)
T ss_pred Hhhc---cccccccccCCCCCccCcCCCCcc
Confidence 7543 334445654 47999999999654
No 113
>COG2866 Predicted carboxypeptidase [Amino acid transport and metabolism]
Probab=98.81 E-value=6.3e-09 Score=111.49 Aligned_cols=91 Identities=31% Similarity=0.499 Sum_probs=80.2
Q ss_pred CCc-ceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCce
Q psy8322 296 ESK-DLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE 374 (651)
Q Consensus 296 egr-~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~ 374 (651)
+|| ++++.+-..++ .++.|+|.|++|+| |..++.+++..|+..|...+..++.++++.++|+||.+||||++
T Consensus 131 ~GR~~~~i~~~~~~~----~~~~i~~~~~~H~~---g~~~~~~~~~~li~r~~~~~~~~~~lld~~~~~vvp~~NpDG~~ 203 (374)
T COG2866 131 EGRDDPLITFPESNP----EHKTILITAGQHAR---GEKMVEWFLYNLILRYLDPDVQVRKLLDRADLHVVPNVNPDGSD 203 (374)
T ss_pred cccccceeeecCCCC----ccceeeEecccccC---ccHHHHHHHHHHHHHhcCccchhhhhhccccEEEecccCCchhh
Confidence 888 66666665544 78999999999999 88999999999999998755889999999999999999999999
Q ss_pred eeecccccCCCCCCCceeEeeccCCCC
Q psy8322 375 LAVEGNCRSGRGRTPPFLISLFLPFPV 401 (651)
Q Consensus 375 ~~~~~~~~~~kgr~~~~gvdlnrnf~~ 401 (651)
+.+. |.++.|+||||+|+-
T Consensus 204 ~~~l--------r~na~~~dLnr~~~~ 222 (374)
T COG2866 204 LGNL--------RTNANGVDLNRNFIA 222 (374)
T ss_pred hccc--------ccccCccchhhhccC
Confidence 9975 889999999999943
No 114
>cd06233 Peptidase_M14-like_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=98.81 E-value=9.2e-09 Score=105.47 Aligned_cols=83 Identities=27% Similarity=0.235 Sum_probs=68.1
Q ss_pred CCcceEEEEeeCCCccCCCCCeEEEeccccCCC-cchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCce
Q psy8322 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDE-PIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE 374 (651)
Q Consensus 296 egr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E-~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~ 374 (651)
|.-+|.++.|+... ..|.+++.+|+||.| .+|..+++.+++.+... .+..++.|.+||++||.|+.
T Consensus 36 ~~l~i~v~~~g~~~----~~~~l~i~sGvHG~Eg~~Gs~~~~~ll~~~~~~---------~~~~~~~vi~vh~vNP~Gf~ 102 (283)
T cd06233 36 EALAIDVARLGPAD----AKRLLVITSGTHGVEGFCGSAIQLALLRELLPR---------SLPAGVAVLLVHALNPYGFA 102 (283)
T ss_pred ceeeeeEEEEcCCC----CCcEEEEEecccCCcccchHHHHHHHHHhcchh---------hccCCceEEEEeCcCHHHHh
Confidence 44467788886543 467999999999999 89999999999887532 35668899999999999997
Q ss_pred eeecccccCCCCCCCceeEeeccCCC
Q psy8322 375 LAVEGNCRSGRGRTPPFLISLFLPFP 400 (651)
Q Consensus 375 ~~~~~~~~~~kgr~~~~gvdlnrnf~ 400 (651)
... |.|..||||||||-
T Consensus 103 ~~~---------R~nedgvDLNRnf~ 119 (283)
T cd06233 103 HLR---------RVNENNVDLNRNFL 119 (283)
T ss_pred hcc---------cCCCCCCChhhccc
Confidence 655 78889999999993
No 115
>cd06251 M14_ASTE_ASPA_like_1 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.72 E-value=4.4e-08 Score=102.22 Aligned_cols=80 Identities=30% Similarity=0.258 Sum_probs=59.6
Q ss_pred ceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeec
Q psy8322 299 DLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVE 378 (651)
Q Consensus 299 ~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~ 378 (651)
.|.+..|.... ..|.++++||+||+|+.|..++..+++.|... .-+-+++++|++||.|+....
T Consensus 8 ~~pv~~~~g~~----~gp~v~i~~giHGdE~~G~~~~~~l~~~l~~~-----------~~~g~v~~vp~~Np~a~~~~~- 71 (287)
T cd06251 8 SIPVHVIRGKK----PGPTLLLTAAIHGDELNGVEIIRRLLRQLDPK-----------TLRGTVIAVPVVNVFGFLNQS- 71 (287)
T ss_pred eeeEEEEeCCC----CCCEEEEEcCccCCchhHHHHHHHHHhcCCcc-----------cCceEEEEEeCCCHHHHHhcc-
Confidence 34555553322 35999999999999999999998888876321 123477899999999997644
Q ss_pred ccccCCCCCCCceeEeeccCCCCC
Q psy8322 379 GNCRSGRGRTPPFLISLFLPFPVT 402 (651)
Q Consensus 379 ~~~~~~kgr~~~~gvdlnrnf~~~ 402 (651)
|....+.||||.||-+
T Consensus 72 --------R~~~d~~dlNR~fpg~ 87 (287)
T cd06251 72 --------RYLPDRRDLNRSFPGS 87 (287)
T ss_pred --------ccCCCccCHhhcCCCC
Confidence 4444689999999854
No 116
>PRK02259 aspartoacylase; Provisional
Probab=98.63 E-value=6.1e-08 Score=101.07 Aligned_cols=99 Identities=22% Similarity=0.219 Sum_probs=68.3
Q ss_pred CeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCC
Q psy8322 79 PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDL 158 (651)
Q Consensus 79 ~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDL 158 (651)
+.|+|+||+||+|..|.+++..+++.+... . + .....++|++||.+++... |.. ..||
T Consensus 3 ~~v~i~aGvHGnE~~Gv~~v~~l~~~~~~~---------~-~-~g~~i~~~i~Np~A~~~~~---------Ry~--~~DL 60 (288)
T PRK02259 3 NRVAIVGGTHGNEITGIYLVKKWQQQPNLI---------N-R-KGLEVQTVIGNPEAIEAGR---------RYI--DRDL 60 (288)
T ss_pred cEEEEEcCccCChhHHHHHHHHHHhccccc---------c-c-CccEEEEEeeCHHHHHhCC---------CCC--cccC
Confidence 689999999999999999887777765321 1 2 2346788899999998643 432 3799
Q ss_pred CCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC------CcEEEEEEecCc
Q psy8322 159 NRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV------PFVMSLQLHGGN 209 (651)
Q Consensus 159 NRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~------~~~~~i~~H~~~ 209 (651)
||.||-..... ...+..|.+.-..+.... +.++.||+|++.
T Consensus 61 NR~Fpg~~~~~----------~~~~~~e~~~A~~l~~~~~~~~~~~~D~~iDLHttt 107 (288)
T PRK02259 61 NRSFRLDLLQN----------PDLSGYEQLRAKELVQQLGPKGNSPCDFIIDLHSTT 107 (288)
T ss_pred CCCCCCccccC----------CCCCCHHHHHHHHHHHHHhhccCccCcEEEECCCCC
Confidence 99999432211 112345555555555544 678999999864
No 117
>COG3608 Predicted deacylase [General function prediction only]
Probab=98.61 E-value=1.3e-07 Score=97.91 Aligned_cols=111 Identities=25% Similarity=0.353 Sum_probs=80.4
Q ss_pred EEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccc
Q psy8322 63 LLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG 142 (651)
Q Consensus 63 i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~ 142 (651)
+.++.+++++ -|.+++.|+.||+|.-|+.++.+|++.|-.. + =.-+++|||.+||-+++...
T Consensus 38 ~~~~~~~~g~-----gp~~~l~ag~HGdEl~G~~al~~Li~~L~~a---------~--i~GtV~iVP~aN~~a~~~~~-- 99 (331)
T COG3608 38 TPVFVFGNGP-----GPSVLLQAGVHGDELPGVIALRRLIPALDPA---------D--ISGTVIIVPIANPPAFEAQG-- 99 (331)
T ss_pred ceEEEecCCC-----CCEEEEEecccccccchHHHHHHHHHhcCHh---------h--cCceEEEEeccCHHHHHhhc--
Confidence 3455555543 4999999999999999999999999988542 1 23589999999999998654
Q ss_pred cccCCCCCCC-ccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC---CcEEEEEEecCceeeee
Q psy8322 143 NCRSGRGRNN-INNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV---PFVMSLQLHGGNVVASY 214 (651)
Q Consensus 143 ~r~~~~~r~n-~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~---~~~~~i~~H~~~~~~~~ 214 (651)
|.. -.+.|+||+||- ..- ..-+.++.++++.. ..++.+|+|+++.-..|
T Consensus 100 -------R~~p~d~~N~NR~fPg--------------~~d--gs~t~ria~~l~r~L~~~aD~VlDlHsg~~~~~~ 152 (331)
T COG3608 100 -------RFSPGDDTNLNRAFPG--------------RPD--GSATERIADRLKRLLLPLADIVLDLHSGGEGLDY 152 (331)
T ss_pred -------ccCCCCCCcccccCCC--------------CCC--CCHHHHHHHHHHHhhhcccCEEEEccCCCCcccc
Confidence 433 378899999991 111 22345666666544 37789999998775444
No 118
>TIGR02994 ectoine_eutE ectoine utilization protein EutE. Members of this family, part of the succinylglutamate desuccinylase / aspartoacylase family (pfam04952), belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it the operon is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida.
Probab=98.61 E-value=2e-07 Score=98.55 Aligned_cols=206 Identities=16% Similarity=0.089 Sum_probs=111.3
Q ss_pred CCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC-ceeE
Q psy8322 315 VPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP-PFLI 393 (651)
Q Consensus 315 ~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~-~~gv 393 (651)
.|+++++|++||+|+.|..++.+|++.|-. . .-+-.+.+||++||-|..... |.. ..|.
T Consensus 47 gp~v~i~agvHGdE~~G~~~~~~L~~~l~~-------~----~l~G~v~~vP~~N~~g~~~~~---------r~~p~d~~ 106 (325)
T TIGR02994 47 GPTALLTGGNHGDEYEGPIALFELARTLDA-------E----DVSGRIIIVPAMNYPAFRAGT---------RTSPIDRG 106 (325)
T ss_pred CCEEEEEeccCCCchHHHHHHHHHHhhCCh-------h----hCcEEEEEEcCCCHHHHHhhC---------CCCCCCCC
Confidence 499999999999999999999999998832 1 124569999999998875443 322 3588
Q ss_pred eeccCCCCCCCCCCCCCChHHHHHHHHH---hhccCCCCcCCCCCCCCcccc----c--------------cCcceec-c
Q psy8322 394 SLFLPFPVTKNKPALTPDTDVFLHLAST---YARLHPTMHMKRPCPGNTVLK----F--------------ENGVTNG-A 451 (651)
Q Consensus 394 dlnrnf~~~~~~~~~~~~~~~f~~l~~~---~a~~~~~~~~~~~~~~~~~~~----~--------------~~gi~n~-~ 451 (651)
||||.||-+... +..++.-..+... -++-.-.+|.++.+......- + .-|.... .
T Consensus 107 nlNR~fPG~~~g---s~~~riA~~l~~~l~~~aD~~iDlHs~~~~~~~~P~v~~~~~~~~~~~~~~~~lA~~fg~p~~~~ 183 (325)
T TIGR02994 107 NLNRSFPGRPDG---TVTEKIADYFQRHLLPLADIVLDFHSGGKTLDFVPFAAAHILPDKAQEAKCFDAVAAFAAPYSMK 183 (325)
T ss_pred ccCCCCCCCCCC---CHHHHHHHHHHHhHHhhCCEEEECCCCCccccccceEEEecCCcchhhHHHHHHHHhcCCCeEEE
Confidence 999999843221 2222222222222 133333344433211111000 0 0011000 0
Q ss_pred ceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchHHHHHHHHhhccceeEEEEcCCCCcccceEEEEee
Q psy8322 452 AWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAY 531 (651)
Q Consensus 452 ~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~all~~~aqa~~~i~G~V~D~~g~pi~~A~V~i~~ 531 (651)
.....+|++-|.+-...+++++|+|++++..-..+. -+.-.+.++.++.... -+.|.+ .+.+...+.+..
T Consensus 184 ~~~~~~~gs~~~a~~~~Gip~i~~E~Gg~~~~~~~~----~~~~~~gi~~vL~~lg-ml~~~~-----~~~~~~~~~~~~ 253 (325)
T TIGR02994 184 MLEIDSVGMYDTAAEEMGKVFVTTELGGGGTASART----IKIAKRGVRNVLRHAG-ILKGEL-----EIAPTIWLDMPS 253 (325)
T ss_pred eccCCCCccHHHHHHHCCCeEEEEeCCCCCcCCHHH----HHHHHHHHHHHHHHcC-CcCCCC-----CCCCccceecCC
Confidence 001134567778777788999999998755322111 2223456777665421 233332 111111121122
Q ss_pred eeeeeeeCCCeeEEeeccCceE
Q psy8322 532 KNVSFMSSQRGEYWRVLMPGIY 553 (651)
Q Consensus 532 ~~~~~~Td~~G~f~~~l~~g~y 553 (651)
...-..+...|.|.....+|..
T Consensus 254 ~~~~v~Ap~~Gi~~~~v~~G~~ 275 (325)
T TIGR02994 254 DDCFIFAEDDGLIEFMIDLGDP 275 (325)
T ss_pred CCeEEEcCCCeEEEEecCCCCE
Confidence 2234567888888666666653
No 119
>cd06254 M14_ASTE_ASPA_like_4 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.58 E-value=2.3e-07 Score=96.90 Aligned_cols=72 Identities=21% Similarity=0.162 Sum_probs=55.9
Q ss_pred CCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeE
Q psy8322 314 GVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLI 393 (651)
Q Consensus 314 ~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gv 393 (651)
..|.+++.|++||+|+.|..++..|++.|- +. .-+-.++++|++||.|++... +...+..+.
T Consensus 16 ~gp~v~i~agvHG~E~~G~~~~~~l~~~l~-------~~----~~~g~v~~vp~~N~~a~~~~~-------r~~~~~d~~ 77 (288)
T cd06254 16 PGPTLAITAGVHGGEYPGIQALQKLAREID-------PA----KLSGTLIIVHVLNLSGFYART-------PYIVPEDGK 77 (288)
T ss_pred CCCEEEEEecccCCchhHHHHHHHHHHhCC-------cc----cCeEEEEEEeCcCHHHHHhcC-------cccCCCCCC
Confidence 359999999999999999999999988762 11 125679999999999987532 112345789
Q ss_pred eeccCCCCCC
Q psy8322 394 SLFLPFPVTK 403 (651)
Q Consensus 394 dlnrnf~~~~ 403 (651)
||||.||-+.
T Consensus 78 dlNR~fpg~~ 87 (288)
T cd06254 78 NLNRVFPGDK 87 (288)
T ss_pred chhhcCCCCC
Confidence 9999998653
No 120
>cd03855 M14_ASTE Peptidase M14 Succinylglutamate desuccinylase (ASTE, also known as N-succinyl-L-glutamate amidohydrolase, N2-succinylglutamate desuccinylase, and SGDS; EC 3.5.1.96) belongs to the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily of the M14 family of metallocarboxypeptidases. This group includes succinylglutamate desuccinylase that catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes N-succinyl-L-glutamate to succinate and L-glutamate.
Probab=98.57 E-value=3.1e-07 Score=97.19 Aligned_cols=100 Identities=24% Similarity=0.293 Sum_probs=67.7
Q ss_pred CCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccC
Q psy8322 76 LGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINN 155 (651)
Q Consensus 76 ~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~G 155 (651)
..-|.|+|+||+||||..|.+++..+++.|.... +.-....++|+.||.++.... |.. .
T Consensus 40 ~~gp~v~IsaGvHGNE~~Gi~~l~~ll~~l~~~~----------l~~~~~v~~~~~Np~A~~~~~---------R~~--d 98 (322)
T cd03855 40 PATKAIVISAGVHGNETAPIEILNQLIKDLLAGE----------LPLAHRLLFIFGNPPAMRAGE---------RFV--D 98 (322)
T ss_pred CCCCeEEEEccccCCchhHHHHHHHHHHhhhhcc----------ccCCeEEEEEeeCHHHHHhCc---------ccC--C
Confidence 3458999999999999999999999988887521 111233567789999998543 432 3
Q ss_pred cCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHH-------HHHHHHHhC---CcEEEEEEecC
Q psy8322 156 HDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQ-------AVIDWMNSV---PFVMSLQLHGG 208 (651)
Q Consensus 156 vDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~-------al~~~~~~~---~~~~~i~~H~~ 208 (651)
.||||.||-.+... .+..|.+ .+.+++.+. ..++.+|+|+.
T Consensus 99 ~DLNR~FpG~~~~~------------~~~~E~~rA~~L~~~~~~~~~~~~~~~~d~~iDLHta 149 (322)
T cd03855 99 ENLNRLFSGRHQKD------------EPGPERARAAELEQAVADFFAAGPSGAERWHYDLHTA 149 (322)
T ss_pred CCccCCCCCCcccC------------CCChHHHHHHHHHHHHHHHHhhcccccCcEEEEccCC
Confidence 59999999433210 1124443 233355444 57999999985
No 121
>cd06256 M14_ASTE_ASPA_like_6 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.56 E-value=1.1e-07 Score=100.40 Aligned_cols=97 Identities=25% Similarity=0.329 Sum_probs=65.7
Q ss_pred CeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCC
Q psy8322 79 PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDL 158 (651)
Q Consensus 79 ~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDL 158 (651)
|.|+|+||+||+|..|.+++..+++.+.. .. +... .+++++||-+++... |....|.||
T Consensus 35 p~v~I~aGvHGNE~~Gi~al~~ll~~~~~---------~~-~~~~--~~l~i~Np~A~~~~~---------R~~~d~~DL 93 (327)
T cd06256 35 PPLFVSTLLHGNEPTGLQAVQRLLKALEA---------RP-LPRS--LLLFIGNVAAALAGV---------RRLDGQPDY 93 (327)
T ss_pred CeEEEEccccCCcHHHHHHHHHHHHhCCh---------hh-cCCc--EEEEEeCHHHHHhCc---------ccCCCCCCc
Confidence 89999999999999999999777776542 12 3333 445579999998543 555568899
Q ss_pred CCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCc
Q psy8322 159 NRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGN 209 (651)
Q Consensus 159 NRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~ 209 (651)
||.||-.. ....+-.++.|.+.+.+....+.||+|++.
T Consensus 94 NR~Fpg~~-------------~s~e~r~A~~l~~~l~~~~~d~~IDLHstt 131 (327)
T cd06256 94 NRCWPGPY-------------DDPEGRLAEEVLELLADERPEASIDIHNNT 131 (327)
T ss_pred cCCCCCCC-------------CCHHHHHHHHHHHHHHhcCCcEEEECCCCC
Confidence 99998211 111223333444444444568999999763
No 122
>cd06909 M14_ASPA Aspartoacylase (ASPA) belongs to the Succinylglutamate desuccinylase/aspartoacylase subfamily of the M14 family of metallocarboxypeptidases. ASPA (also known as aminoacylase 2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.53 E-value=2.5e-07 Score=95.77 Aligned_cols=98 Identities=26% Similarity=0.265 Sum_probs=64.8
Q ss_pred CeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCC
Q psy8322 79 PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDL 158 (651)
Q Consensus 79 ~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDL 158 (651)
+.|+|+||+||+|..|..++..+++.+... .......++|+.||.+++... |.. ..||
T Consensus 1 ~~v~I~aGvHGnE~~Gv~~v~~l~~~~~~~-----------~~~~~~v~~~i~Np~A~~~~~---------Ry~--d~DL 58 (282)
T cd06909 1 KRVAIVGGTHGNELTGVYLVKKWLQQPELI-----------QRPSLEVHPVIANPRAVEACR---------RYI--DTDL 58 (282)
T ss_pred CeEEEEcCccCChHHHHHHHHHHHhccccc-----------ccCCeEEEEEecCHHHHHhCC---------ccC--CCCC
Confidence 468999999999999999887777655321 122334566678999998543 433 5899
Q ss_pred CCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC------CcEEEEEEecC
Q psy8322 159 NRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV------PFVMSLQLHGG 208 (651)
Q Consensus 159 NRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~------~~~~~i~~H~~ 208 (651)
||.||-..... ...+.+|.+....+.... +.++.||+|++
T Consensus 59 NR~Fpg~~~~~----------~~~~~~e~~~A~~l~~~l~~~~~~~~D~~iDLHst 104 (282)
T cd06909 59 NRCFTLENLSN----------SELLPYEVKRAKELNQKLGPKGNSPCDFVIDLHNT 104 (282)
T ss_pred CCCCCCCccCC----------CCCCCHHHHHHHHHHHHHhhccCCCceEEEECCCC
Confidence 99999433221 111234555544444433 47899999985
No 123
>cd06253 M14_ASTE_ASPA_like_3 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.50 E-value=5.6e-07 Score=94.32 Aligned_cols=75 Identities=33% Similarity=0.387 Sum_probs=58.8
Q ss_pred CCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC-Ccee
Q psy8322 314 GVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT-PPFL 392 (651)
Q Consensus 314 ~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~-~~~g 392 (651)
+.|+++++|++||+|+.|..++.+++++|...... ..+.-+-++.++|++||-|..... |. +..+
T Consensus 18 ~gp~v~i~agvHGdE~~G~~~~~~L~~~l~~~~~~-----~~~~l~g~v~~vP~~N~~a~~~~~---------R~~p~d~ 83 (298)
T cd06253 18 GEKRICIVGGIHGDELQGLYICSLLIRFLKELEKR-----GPLKLNGIVDVIPSVNPLGLNLGT---------RFWPTDN 83 (298)
T ss_pred CCcEEEEEccCccchHHHHHHHHHHHHHHhhhhcc-----cccccCceEEEEeCcCHHHHHHhh---------CcCCCCC
Confidence 46999999999999999999999999999754311 012237899999999999987533 43 3468
Q ss_pred EeeccCCCCC
Q psy8322 393 ISLFLPFPVT 402 (651)
Q Consensus 393 vdlnrnf~~~ 402 (651)
.||||.||-+
T Consensus 84 ~dlNR~Fpg~ 93 (298)
T cd06253 84 SDINRMFPGD 93 (298)
T ss_pred CcccccCCCC
Confidence 9999999854
No 124
>cd06252 M14_ASTE_ASPA_like_2 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.49 E-value=7.4e-07 Score=94.29 Aligned_cols=68 Identities=35% Similarity=0.376 Sum_probs=55.0
Q ss_pred CCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCc-eeE
Q psy8322 315 VPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPP-FLI 393 (651)
Q Consensus 315 ~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~-~gv 393 (651)
.|+|+++||+||+|..|..++.+++++|... .-+-.+.++|++||-|+.... |... .+.
T Consensus 34 gp~v~I~aGiHGdE~~G~~~~~~L~~~l~~~-----------~l~G~vi~vP~~Np~a~~~~~---------R~~p~D~~ 93 (316)
T cd06252 34 GPTVLLTGGNHGDEYEGQIALLRLARRLDPE-----------EVRGRVIILPALNFPAVQAGT---------RTSPIDGG 93 (316)
T ss_pred CCEEEEEccCCCCchHHHHHHHHHHHhCChh-----------hCeEEEEEEeCCCHHHHHhcc---------ccCCCCCC
Confidence 5899999999999999999999999887321 125589999999999997543 4443 579
Q ss_pred eeccCCCCC
Q psy8322 394 SLFLPFPVT 402 (651)
Q Consensus 394 dlnrnf~~~ 402 (651)
||||.||-+
T Consensus 94 DLNR~Fpg~ 102 (316)
T cd06252 94 NLNRVFPGD 102 (316)
T ss_pred cHHhhCCCC
Confidence 999999854
No 125
>cd06910 M14_ASTE_ASPA_like_7 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.48 E-value=2.3e-07 Score=96.08 Aligned_cols=112 Identities=20% Similarity=0.133 Sum_probs=69.6
Q ss_pred CeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCC
Q psy8322 79 PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDL 158 (651)
Q Consensus 79 ~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDL 158 (651)
|.++|.|++||+|..|.+++..+++. ++ .. +. .++.++ ++||-++.... |+... -..-.+.||
T Consensus 1 P~v~isagvHGnE~~Gi~al~~l~~~--------~~--~~-l~-G~li~~-~~N~~A~~~~~---~~~p~-~~R~~~~dL 63 (272)
T cd06910 1 PHVMINALVHGNEICGAIALDALLRE--------GL--RP-RR-GRLTLA-FANVAAYARFD---PNNPT-ASRFVDEDM 63 (272)
T ss_pred CEEEEEcCcccChHHHHHHHHHHHhC--------cc--cc-cC-CCEEEE-EECHHHHHhcc---cCCCc-ccccCCCCc
Confidence 78999999999999999999777763 11 11 33 355566 89999997432 11000 011225799
Q ss_pred CCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC-CcEEEEEEecCceeeeeccccc
Q psy8322 159 NRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSF 219 (651)
Q Consensus 159 NRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~-~~~~~i~~H~~~~~~~~P~~~~ 219 (651)
||.||-.+..+ +. ...|.+.-..+..-. ..++.||+|++.. -.+||...
T Consensus 64 NR~Fpg~~~~g---------~~--~~~e~~~A~~l~~~i~~aD~~iDLHt~~~-~~~p~~~~ 113 (272)
T cd06910 64 NRVWSPDVLDG---------PR--DSIELRRARELRPVIDTADYLLDLHSMQW-PSPPLILA 113 (272)
T ss_pred CCCCCCcccCC---------Cc--ccHHHHHHHHHHHHHhhCCEEEECCCCCC-CCCCEEEe
Confidence 99999443221 11 235555544443222 4779999999877 35666653
No 126
>PRK05324 succinylglutamate desuccinylase; Provisional
Probab=98.45 E-value=9e-07 Score=93.83 Aligned_cols=100 Identities=21% Similarity=0.204 Sum_probs=66.2
Q ss_pred CCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccC
Q psy8322 76 LGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINN 155 (651)
Q Consensus 76 ~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~G 155 (651)
...|.|+|+||+||||..|.+++..+++.|... .+.-..+ .++|++||.++.... |.. .
T Consensus 45 ~~gp~v~IsaGvHGNE~~Gi~~l~~Ll~~l~~~---------~~~~~~~-v~~i~~Np~A~~~~~---------R~v--d 103 (329)
T PRK05324 45 PSTKALVLSAGIHGNETAPIELLDQLVRDLLAG---------ELPLRAR-LLVILGNPPAMRAGK---------RYL--D 103 (329)
T ss_pred CCCCeEEEECCcccCcHHHHHHHHHHHHhhhcc---------ccccCce-EEEEecCHHHHHhCc---------ccC--C
Confidence 345899999999999999999999988888652 1111223 555589999998533 433 4
Q ss_pred cCCCCCCCcccCCCCCCCCCCCCCCCCCcHHH---HHHHHHHHh----C--CcEEEEEEecC
Q psy8322 156 HDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEV---QAVIDWMNS----V--PFVMSLQLHGG 208 (651)
Q Consensus 156 vDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt---~al~~~~~~----~--~~~~~i~~H~~ 208 (651)
.||||.||-.+... .+.+|. +.|.+.+.. . ..++.+|+|+.
T Consensus 104 ~DLNR~FpG~~~~~------------~~~~E~~rA~~L~~~i~~~~~~~~~~~D~~iDLHta 153 (329)
T PRK05324 104 EDLNRLFGGRHQQF------------PGSDEARRAAELEQAVEDFFAAGAERVRWHYDLHTA 153 (329)
T ss_pred CCcccCCCCCcCCC------------CCcHHHHHHHHHHHHHHHHhcccCccceEEEECCCC
Confidence 69999999544322 111254 233332222 1 36799999973
No 127
>cd06230 M14_ASTE_ASPA_like The Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily belongs to the M14 family of metallocarboxypeptidases (MCPs), and includes ASTE, which catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) which cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.43 E-value=4.1e-07 Score=93.24 Aligned_cols=82 Identities=29% Similarity=0.340 Sum_probs=59.8
Q ss_pred EEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeecc
Q psy8322 318 VKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFL 397 (651)
Q Consensus 318 v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnr 397 (651)
|++.||+||+|+.|.+++..+++.+.... . -+.+++++|++||+|++... |.+. .||||
T Consensus 1 v~i~agiHG~E~~g~~~~~~l~~~~~~~~---------~-l~g~v~~vp~~N~~g~~~~~---------R~~~--~DLNR 59 (252)
T cd06230 1 VAVVGGVHGNEPCGVQAIRRLLAELDEGQ---------A-LRGPVKLVPAANPLALEAGQ---------RYLD--RDLNR 59 (252)
T ss_pred CEEEcccCCCcHHHHHHHHHHHHHHhhhc---------c-cccEEEEEeCcCHHHHHhCC---------CCCC--cCCCC
Confidence 57999999999999999999999886421 2 25678999999999998644 3333 99999
Q ss_pred CCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322 398 PFPVTKNKPALTPDTDVFLHLASTY 422 (651)
Q Consensus 398 nf~~~~~~~~~~~~~~~f~~l~~~~ 422 (651)
+||-... ..+++...-..+....
T Consensus 60 ~fpg~~~--~~~~~~~~a~~l~~~i 82 (252)
T cd06230 60 IFPGDPD--SGTYEDRLAAELCPEL 82 (252)
T ss_pred CCCCCCC--CCCHHHHHHHHHHHHH
Confidence 9985432 1245555545554433
No 128
>cd06255 M14_ASTE_ASPA_like_5 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.31 E-value=8.2e-07 Score=92.91 Aligned_cols=83 Identities=27% Similarity=0.346 Sum_probs=62.8
Q ss_pred CCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCcee
Q psy8322 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL 375 (651)
Q Consensus 296 egr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~ 375 (651)
+.-.|.+..|.... ..|.+++.|++||+|..|.+++..+++.|... .+ +-++.++|++||.|+..
T Consensus 9 ~~~~~pv~~~~g~~----~gp~v~i~agvHG~E~~G~~~~~~l~~~l~~~----------~~-~g~~~~vp~~N~~a~~~ 73 (293)
T cd06255 9 SAVALPVTILRGAE----PGPTLWLHAQVHGNEYNGTQAIVDLYRSLDPA----------AL-KGRLVALPTANPTALDA 73 (293)
T ss_pred CccceeEEEEeCCC----CCCEEEEEcccCCCcHHHHHHHHHHHHhCCHh----------hc-CCeEEEEeCcCHHHHHh
Confidence 33346666664432 35999999999999999999999999887321 12 34778999999999987
Q ss_pred eecccccCCCCCCCc-eeEeeccCCCCC
Q psy8322 376 AVEGNCRSGRGRTPP-FLISLFLPFPVT 402 (651)
Q Consensus 376 ~~~~~~~~~kgr~~~-~gvdlnrnf~~~ 402 (651)
.. |.+. .+.||||.||-+
T Consensus 74 ~~---------R~~p~d~~dlNR~fpg~ 92 (293)
T cd06255 74 RT---------RMSPFDELDLNRTFPGN 92 (293)
T ss_pred hc---------ccCCCCCCCcccCCCCC
Confidence 65 5554 789999999854
No 129
>TIGR03242 arg_catab_astE succinylglutamate desuccinylase. Members of this protein family are succinylglutamate desuccinylase, the fifth and final enzyme of the arginine succinyltransferase (AST) pathway for arginine catabolism. This model excludes the related protein aspartoacylase.
Probab=98.25 E-value=3e-06 Score=89.66 Aligned_cols=67 Identities=28% Similarity=0.333 Sum_probs=50.0
Q ss_pred CCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCc
Q psy8322 77 GVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNH 156 (651)
Q Consensus 77 ~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~Gv 156 (651)
.-|.|+|+||+||||..|.+++..+++.+... .+.-..++.++ ++||.++.... |.. ..
T Consensus 40 ~gp~v~IsaGvHGNE~~Gi~~l~~ll~~l~~~---------~~~~~~~l~~i-~~Np~A~~~~~---------R~~--~~ 98 (319)
T TIGR03242 40 PQKSLVISAGIHGNETAPIEILEQLLGDIAAG---------KLPLRVRLLVI-LGNPPAMRTGK---------RYL--HD 98 (319)
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHhhhhhc---------cccCCceEEEE-EcCHHHHHhCc---------ccC--CC
Confidence 34899999999999999999998888887642 12223455444 79999998543 433 46
Q ss_pred CCCCCCCc
Q psy8322 157 DLNRQFPD 164 (651)
Q Consensus 157 DLNRnf~~ 164 (651)
||||.||-
T Consensus 99 DLNR~FpG 106 (319)
T TIGR03242 99 DLNRMFGG 106 (319)
T ss_pred CccCCCCC
Confidence 99999983
No 130
>PF04952 AstE_AspA: Succinylglutamate desuccinylase / Aspartoacylase family; InterPro: IPR007036 This family describes both succinylglutamate desuccinylase that catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway and also includes aspartoacylase 3.5.1.15 from EC which cleaves acylaspartate into a fatty acid and aspartate. Mutations in P45381 from SWISSPROT lead to Canavan disease [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0008152 metabolic process; PDB: 3CDX_A 3FMC_A 3NA6_A 2BCO_B 3B2Y_A 3LWU_A 3IEH_A 2QVP_B 2G9D_A 1YW4_A ....
Probab=98.01 E-value=4.1e-06 Score=87.79 Aligned_cols=67 Identities=27% Similarity=0.237 Sum_probs=54.3
Q ss_pred CCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC-ceeE
Q psy8322 315 VPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP-PFLI 393 (651)
Q Consensus 315 ~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~-~~gv 393 (651)
-|+++++|++||+|+.|..++..++++|-... -.-++.++|++||.|+.... |.. ..|.
T Consensus 2 Gp~l~i~agvHGnE~~G~~a~~~L~~~l~~~~-----------~~G~~~~vp~~N~~a~~~~~---------R~~~~d~~ 61 (292)
T PF04952_consen 2 GPTLLITAGVHGNEYNGIEALQRLLRELDPAD-----------LSGTVIIVPVANPPAFRQGT---------RFVPIDGR 61 (292)
T ss_dssp S-EEEEEE-SSTTBCHHHHHHHHHHHHHHGGG-----------CTCEEEEEEESSHHHHHHTS---------SSSTTTSS
T ss_pred CCEEEEEcCcccChHHHHHHHHHHHhcchhcc-----------cCCceEEEEEeCHHHHHhcc---------ccCCCCCC
Confidence 38999999999999999999999999885432 34589999999999988666 433 4789
Q ss_pred eeccCCCC
Q psy8322 394 SLFLPFPV 401 (651)
Q Consensus 394 dlnrnf~~ 401 (651)
||||.||-
T Consensus 62 dLNR~Fpg 69 (292)
T PF04952_consen 62 DLNRCFPG 69 (292)
T ss_dssp BGGGSTTH
T ss_pred CHHHhCCC
Confidence 99999984
No 131
>PF08400 phage_tail_N: Prophage tail fibre N-terminal; InterPro: IPR013609 This entry represents the N terminus of phage 933W tail fibre protein. The characteristics of the protein distribution suggest prophage matches.
Probab=97.81 E-value=0.0001 Score=66.70 Aligned_cols=66 Identities=24% Similarity=0.409 Sum_probs=55.5
Q ss_pred ceeEEEEcCCCCcccceEEEEeeee----------eeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEE-EEEeeCC
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYKN----------VSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRD-RIKIPES 574 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~~----------~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~-~v~v~~~ 574 (651)
.|+|+.+|..|+|++|++|.|+-.. ....|++.|.|...+.||.|.|.+...|+.+... .|.|...
T Consensus 4 ~ISGvL~dg~G~pv~g~~I~L~A~~tS~~Vv~~t~as~~t~~~G~Ys~~~epG~Y~V~l~~~g~~~~~vG~I~V~~d 80 (134)
T PF08400_consen 4 KISGVLKDGAGKPVPGCTITLKARRTSSTVVVGTVASVVTGEAGEYSFDVEPGVYRVTLKVEGRPPVYVGDITVYED 80 (134)
T ss_pred EEEEEEeCCCCCcCCCCEEEEEEccCchheEEEEEEEEEcCCCceEEEEecCCeEEEEEEECCCCceeEEEEEEecC
Confidence 4999999999999999999998533 2447899999999999999999999999977664 5666543
No 132
>COG3608 Predicted deacylase [General function prediction only]
Probab=97.78 E-value=0.00013 Score=76.06 Aligned_cols=68 Identities=26% Similarity=0.261 Sum_probs=52.9
Q ss_pred CCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeE
Q psy8322 314 GVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLI 393 (651)
Q Consensus 314 ~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gv 393 (651)
..|.++++++.||+|.-|..++.+|+++|-..- =.-+++|||.+||=+.+... | +.+..+.
T Consensus 47 ~gp~~~l~ag~HGdEl~G~~al~~Li~~L~~a~-----------i~GtV~iVP~aN~~a~~~~~---R-----~~p~d~~ 107 (331)
T COG3608 47 PGPSVLLQAGVHGDELPGVIALRRLIPALDPAD-----------ISGTVIIVPIANPPAFEAQG---R-----FSPGDDT 107 (331)
T ss_pred CCCEEEEEecccccccchHHHHHHHHHhcCHhh-----------cCceEEEEeccCHHHHHhhc---c-----cCCCCCC
Confidence 469999999999999999999999999984322 13589999999976655443 1 2233667
Q ss_pred eeccCCC
Q psy8322 394 SLFLPFP 400 (651)
Q Consensus 394 dlnrnf~ 400 (651)
++||.||
T Consensus 108 N~NR~fP 114 (331)
T COG3608 108 NLNRAFP 114 (331)
T ss_pred cccccCC
Confidence 8999998
No 133
>cd06909 M14_ASPA Aspartoacylase (ASPA) belongs to the Succinylglutamate desuccinylase/aspartoacylase subfamily of the M14 family of metallocarboxypeptidases. ASPA (also known as aminoacylase 2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=97.39 E-value=0.00074 Score=70.10 Aligned_cols=66 Identities=23% Similarity=0.170 Sum_probs=47.0
Q ss_pred CeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEee
Q psy8322 316 PNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISL 395 (651)
Q Consensus 316 p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdl 395 (651)
+.|++.||+||+|..|..++..+++.+... .......++|+.||-+++... |.. ..||
T Consensus 1 ~~v~I~aGvHGnE~~Gv~~v~~l~~~~~~~-----------~~~~~~v~~~i~Np~A~~~~~---------Ry~--d~DL 58 (282)
T cd06909 1 KRVAIVGGTHGNELTGVYLVKKWLQQPELI-----------QRPSLEVHPVIANPRAVEACR---------RYI--DTDL 58 (282)
T ss_pred CeEEEEcCccCChHHHHHHHHHHHhccccc-----------ccCCeEEEEEecCHHHHHhCC---------ccC--CCCC
Confidence 468999999999999999888888765321 122334566678999986533 322 3799
Q ss_pred ccCCCCCC
Q psy8322 396 FLPFPVTK 403 (651)
Q Consensus 396 nrnf~~~~ 403 (651)
||-||-..
T Consensus 59 NR~Fpg~~ 66 (282)
T cd06909 59 NRCFTLEN 66 (282)
T ss_pred CCCCCCCc
Confidence 99998543
No 134
>PRK15036 hydroxyisourate hydrolase; Provisional
Probab=97.35 E-value=0.00043 Score=63.64 Aligned_cols=57 Identities=19% Similarity=0.215 Sum_probs=48.7
Q ss_pred cceeEEEEc-CCCCcccceEEEEeeee-------eeeeeCCCeeEEe-----eccCceEEEEEEEeeeee
Q psy8322 508 RGVKGLVLD-ETGSRLANVSISLAYKN-------VSFMSSQRGEYWR-----VLMPGIYFIEASKEGYEL 564 (651)
Q Consensus 508 ~~i~G~V~D-~~g~pi~~A~V~i~~~~-------~~~~Td~~G~f~~-----~l~~g~y~l~vs~~Gy~~ 564 (651)
..|++.|.| .+|.|++|+.|.|.... ..+.||.||+|.. .+++|.|+|++...+|-.
T Consensus 27 ~~Is~HVLDt~~G~PA~gV~V~L~~~~~~~w~~l~~~~Td~dGR~~~l~~~~~~~~G~Y~L~F~t~~Yf~ 96 (137)
T PRK15036 27 NILSVHILNQQTGKPAADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFK 96 (137)
T ss_pred CCeEEEEEeCCCCcCCCCCEEEEEEccCCceEEEEEEEECCCCCCccccCcccCCCeeEEEEEEcchhhh
Confidence 359999999 78999999999998754 5678999999932 378899999999999965
No 135
>COG2988 Succinylglutamate desuccinylase [Amino acid transport and metabolism]
Probab=97.34 E-value=0.00053 Score=69.17 Aligned_cols=112 Identities=20% Similarity=0.190 Sum_probs=71.4
Q ss_pred CeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCC
Q psy8322 79 PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDL 158 (651)
Q Consensus 79 ~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDL 158 (651)
..+.|+|||||||..+.+++-.++..+..++ -| -..++.+| +-||--.+... ...--||
T Consensus 44 ~~lvIsaGiHGNEtapvEll~kl~~~~~ag~---~p------~a~r~L~i-lgNP~Ai~~gk-----------RYieqDl 102 (324)
T COG2988 44 GSLVISAGIHGNETAPVELLDKLQQKISAGQ---LP------LAWRCLVI-LGNPPAIAAGK-----------RYIEQDL 102 (324)
T ss_pred CceEEEecccCCccCcHHHHHHHHhhhhhcc---cC------cceeEEEE-ecCcHHHHhch-----------HHHhhhH
Confidence 3799999999999999999998888888753 11 13345555 78998777432 2234599
Q ss_pred CCCCCcccCCCCCCCCCCCCCCCCCcHHH-HHHHHHHHhC--CcEEEEEEec------Cceeeeecccc
Q psy8322 159 NRQFPDYFRHNRSNIPTLVSTSQSIDPEV-QAVIDWMNSV--PFVMSLQLHG------GNVVASYPYDS 218 (651)
Q Consensus 159 NRnf~~~w~~~~s~~p~y~G~~~~sepEt-~al~~~~~~~--~~~~~i~~H~------~~~~~~~P~~~ 218 (651)
||.|...|.... +...++.-|- +++..++..- ++.+.+|+|. -.++.++||..
T Consensus 103 NR~F~gr~q~~~-------~ne~~ra~eler~~q~ff~~~~~~vr~h~DLHtairgs~h~~f~~~P~~~ 164 (324)
T COG2988 103 NRMFGGRPQSFS-------ENETLRAYELERALQDFFQQGKESVRWHLDLHTAIRGSGHPQFGVLPQPD 164 (324)
T ss_pred HHHhCCCcccCC-------CCchhhhHHHHHHHHHHHhcCCCcceEEEEhhhhhhccCCcceeeCCCCC
Confidence 999987665431 1112222332 3444444433 5899999995 23344555544
No 136
>PF08308 PEGA: PEGA domain; InterPro: IPR013229 This domain is found in both archaea and bacteria and has similarity to S-layer (surface layer) proteins. It is named after the characteristic PEGA sequence motif found in this domain. The secondary structure of this domain is predicted to be beta-strands.
Probab=97.21 E-value=0.0015 Score=52.96 Aligned_cols=60 Identities=18% Similarity=0.311 Sum_probs=49.0
Q ss_pred cceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeCCCceEEEEEEeee
Q psy8322 523 ANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAVLESL 586 (651)
Q Consensus 523 ~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~~~~~~~~~L~~~ 586 (651)
++|.|+|.|...+ .|.. -...+++|.|+|++++.||++.+..+.+..++...+++.|++.
T Consensus 11 ~gA~V~vdg~~~G-~tp~---~~~~l~~G~~~v~v~~~Gy~~~~~~v~v~~~~~~~v~~~L~~~ 70 (71)
T PF08308_consen 11 SGAEVYVDGKYIG-TTPL---TLKDLPPGEHTVTVEKPGYEPYTKTVTVKPGETTTVNVTLEPQ 70 (71)
T ss_pred CCCEEEECCEEec-cCcc---eeeecCCccEEEEEEECCCeeEEEEEEECCCCEEEEEEEEEEC
Confidence 5899999887766 2221 1334899999999999999999999999988888899988863
No 137
>PRK02259 aspartoacylase; Provisional
Probab=97.12 E-value=0.00052 Score=71.68 Aligned_cols=65 Identities=22% Similarity=0.117 Sum_probs=48.6
Q ss_pred CeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEee
Q psy8322 316 PNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISL 395 (651)
Q Consensus 316 p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdl 395 (651)
+.|++.||+||+|..|.+++..+++.+... . + .....++|+.||.++.... |.. ..||
T Consensus 3 ~~v~i~aGvHGnE~~Gv~~v~~l~~~~~~~---------~-~-~g~~i~~~i~Np~A~~~~~---------Ry~--~~DL 60 (288)
T PRK02259 3 NRVAIVGGTHGNEITGIYLVKKWQQQPNLI---------N-R-KGLEVQTVIGNPEAIEAGR---------RYI--DRDL 60 (288)
T ss_pred cEEEEEcCccCChhHHHHHHHHHHhccccc---------c-c-CccEEEEEeeCHHHHHhCC---------CCC--cccC
Confidence 689999999999999999888888765321 0 1 2345788899999987644 322 2699
Q ss_pred ccCCCCC
Q psy8322 396 FLPFPVT 402 (651)
Q Consensus 396 nrnf~~~ 402 (651)
||.||-+
T Consensus 61 NR~Fpg~ 67 (288)
T PRK02259 61 NRSFRLD 67 (288)
T ss_pred CCCCCCc
Confidence 9999854
No 138
>KOG3641|consensus
Probab=97.06 E-value=0.0019 Score=70.49 Aligned_cols=111 Identities=20% Similarity=0.270 Sum_probs=82.5
Q ss_pred CCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCcee
Q psy8322 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL 375 (651)
Q Consensus 296 egr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~ 375 (651)
.||++.++.|... +-..+|.|++.+-+|.+|.-+.-++--++++|+.+ ++....|-+..-+-|+||+||||-..
T Consensus 412 ~g~~~~l~tI~~a--e~~~~~~IfLSaRVHpgeTnsSwvmkGilefl~s~----~p~aq~LRe~~vFKI~PMLNPDGV~~ 485 (650)
T KOG3641|consen 412 VGRAMALATIDMA--ECAPRPVIFLSARVHPGETNSSWVMKGILEFLVSN----SPLAQGLRESYVFKIVPMLNPDGVIV 485 (650)
T ss_pred cCCccceEEeeHh--hcCCcceEEEecccCCCCCcHHHHHHHHHHHhhcC----CcHHHhhhhheeEecccccCCCceec
Confidence 6899888888622 34478999999999999999998888999998864 56667799999999999999999763
Q ss_pred eecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322 376 AVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY 422 (651)
Q Consensus 376 ~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~ 422 (651)
.- . |=.-.|.||||-|.-. .+...|.--.-+.|...+
T Consensus 486 Gn---y-----RCSL~G~DLNR~w~tp--s~~shPsi~~~k~li~~l 522 (650)
T KOG3641|consen 486 GN---Y-----RCSLMGLDLNRMWSTP--SPASHPSIYAVKQLIQQL 522 (650)
T ss_pred cc---c-----eeccccchhhhhcCCC--CcccchhHHhHHHHHhhh
Confidence 31 1 3344799999988322 112456555555555555
No 139
>PRK05324 succinylglutamate desuccinylase; Provisional
Probab=97.05 E-value=0.00091 Score=71.09 Aligned_cols=70 Identities=20% Similarity=0.108 Sum_probs=51.2
Q ss_pred CCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCcee
Q psy8322 313 LGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFL 392 (651)
Q Consensus 313 ~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~g 392 (651)
...|.|++.||+||+|..|.+++..+++.|.... +.-....++|+.||.++.... |.. .
T Consensus 45 ~~gp~v~IsaGvHGNE~~Gi~~l~~Ll~~l~~~~----------~~~~~~v~~i~~Np~A~~~~~---------R~v--d 103 (329)
T PRK05324 45 PSTKALVLSAGIHGNETAPIELLDQLVRDLLAGE----------LPLRARLLVILGNPPAMRAGK---------RYL--D 103 (329)
T ss_pred CCCCeEEEECCcccCcHHHHHHHHHHHHhhhccc----------cccCceEEEEecCHHHHHhCc---------ccC--C
Confidence 3569999999999999999999999999886432 111222556689999987533 322 2
Q ss_pred EeeccCCCCCC
Q psy8322 393 ISLFLPFPVTK 403 (651)
Q Consensus 393 vdlnrnf~~~~ 403 (651)
.||||-||-..
T Consensus 104 ~DLNR~FpG~~ 114 (329)
T PRK05324 104 EDLNRLFGGRH 114 (329)
T ss_pred CCcccCCCCCc
Confidence 59999998543
No 140
>cd06256 M14_ASTE_ASPA_like_6 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=97.01 E-value=0.00092 Score=70.86 Aligned_cols=82 Identities=22% Similarity=0.204 Sum_probs=56.0
Q ss_pred CeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEee
Q psy8322 316 PNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISL 395 (651)
Q Consensus 316 p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdl 395 (651)
|.|++.|++||+|..|..++..+++++-. . . +... .++++.||-+++... |....+.||
T Consensus 35 p~v~I~aGvHGNE~~Gi~al~~ll~~~~~-------~--~-~~~~--~~l~i~Np~A~~~~~---------R~~~d~~DL 93 (327)
T cd06256 35 PPLFVSTLLHGNEPTGLQAVQRLLKALEA-------R--P-LPRS--LLLFIGNVAAALAGV---------RRLDGQPDY 93 (327)
T ss_pred CeEEEEccccCCcHHHHHHHHHHHHhCCh-------h--h-cCCc--EEEEEeCHHHHHhCc---------ccCCCCCCc
Confidence 89999999999999999998888876532 1 1 2333 445579999987533 333346799
Q ss_pred ccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322 396 FLPFPVTKNKPALTPDTDVFLHLASTY 422 (651)
Q Consensus 396 nrnf~~~~~~~~~~~~~~~f~~l~~~~ 422 (651)
||-||-... +++...-..+...+
T Consensus 94 NR~Fpg~~~----s~e~r~A~~l~~~l 116 (327)
T cd06256 94 NRCWPGPYD----DPEGRLAEEVLELL 116 (327)
T ss_pred cCCCCCCCC----CHHHHHHHHHHHHH
Confidence 999985432 45554444554443
No 141
>PF09892 DUF2119: Uncharacterized protein conserved in archaea (DUF2119); InterPro: IPR019218 This entry represents a family of hypothetical archaeal proteins of unknown function.
Probab=96.93 E-value=0.0024 Score=60.72 Aligned_cols=82 Identities=21% Similarity=0.333 Sum_probs=59.6
Q ss_pred CeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCC
Q psy8322 79 PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDL 158 (651)
Q Consensus 79 ~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDL 158 (651)
|.=+++||+||+||--+.-++ +.|.. ..+.+-.+.|+| +..+|--++. |
T Consensus 7 p~rLFvgGlHG~Egk~t~~iL---~~l~~----------~~~~~G~l~i~p-lv~~~kYiST-----------------L 55 (193)
T PF09892_consen 7 PKRLFVGGLHGDEGKDTSPIL---KRLKP----------NDFNNGNLIIIP-LVENSKYIST-----------------L 55 (193)
T ss_pred ceEEEEeeccCcchhhHHHHH---HHhCc----------ccccCceEEEEe-CCCCCCceee-----------------c
Confidence 888999999999996655443 33332 223447899999 4445665554 5
Q ss_pred CCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCce
Q psy8322 159 NRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNV 210 (651)
Q Consensus 159 NRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~ 210 (651)
+..| ...++-+.|.+++++++|.+++-+|+|+.
T Consensus 56 ~~~Y-------------------Y~s~~Gk~il~lIe~y~P~~Y~ElHsY~~ 88 (193)
T PF09892_consen 56 DPEY-------------------YKSEMGKKILDLIEKYKPEFYFELHSYSK 88 (193)
T ss_pred CHHH-------------------hcchhhhHHHHHHHHhCCceEEEEeecCH
Confidence 5555 24457789999999999999999999943
No 142
>cd06910 M14_ASTE_ASPA_like_7 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=96.82 E-value=0.0006 Score=70.65 Aligned_cols=70 Identities=20% Similarity=0.083 Sum_probs=46.4
Q ss_pred CeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEee
Q psy8322 316 PNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISL 395 (651)
Q Consensus 316 p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdl 395 (651)
|++++.|++||+|..|.+++..+++. ++ ..|.. ++.++ ++||-++......+. ...|. .+.||
T Consensus 1 P~v~isagvHGnE~~Gi~al~~l~~~--------~~---~~l~G-~li~~-~~N~~A~~~~~~~~p--~~~R~--~~~dL 63 (272)
T cd06910 1 PHVMINALVHGNEICGAIALDALLRE--------GL---RPRRG-RLTLA-FANVAAYARFDPNNP--TASRF--VDEDM 63 (272)
T ss_pred CEEEEEcCcccChHHHHHHHHHHHhC--------cc---cccCC-CEEEE-EECHHHHHhcccCCC--ccccc--CCCCc
Confidence 78999999999999999999988862 11 11333 45555 799999864331000 01111 24699
Q ss_pred ccCCCCC
Q psy8322 396 FLPFPVT 402 (651)
Q Consensus 396 nrnf~~~ 402 (651)
||-||-+
T Consensus 64 NR~Fpg~ 70 (272)
T cd06910 64 NRVWSPD 70 (272)
T ss_pred CCCCCCc
Confidence 9999854
No 143
>cd03855 M14_ASTE Peptidase M14 Succinylglutamate desuccinylase (ASTE, also known as N-succinyl-L-glutamate amidohydrolase, N2-succinylglutamate desuccinylase, and SGDS; EC 3.5.1.96) belongs to the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily of the M14 family of metallocarboxypeptidases. This group includes succinylglutamate desuccinylase that catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes N-succinyl-L-glutamate to succinate and L-glutamate.
Probab=96.82 E-value=0.0021 Score=68.20 Aligned_cols=69 Identities=22% Similarity=0.156 Sum_probs=51.0
Q ss_pred CCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCcee
Q psy8322 313 LGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFL 392 (651)
Q Consensus 313 ~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~g 392 (651)
...|.|++.|++||+|..|.+++..+++.|.... +.-....++|+.||.++.... |.. .
T Consensus 40 ~~gp~v~IsaGvHGNE~~Gi~~l~~ll~~l~~~~----------l~~~~~v~~~~~Np~A~~~~~---------R~~--d 98 (322)
T cd03855 40 PATKAIVISAGVHGNETAPIEILNQLIKDLLAGE----------LPLAHRLLFIFGNPPAMRAGE---------RFV--D 98 (322)
T ss_pred CCCCeEEEEccccCCchhHHHHHHHHHHhhhhcc----------ccCCeEEEEEeeCHHHHHhCc---------ccC--C
Confidence 3568999999999999999999999999886432 112233567789999887533 221 2
Q ss_pred EeeccCCCCC
Q psy8322 393 ISLFLPFPVT 402 (651)
Q Consensus 393 vdlnrnf~~~ 402 (651)
.||||-||-.
T Consensus 99 ~DLNR~FpG~ 108 (322)
T cd03855 99 ENLNRLFSGR 108 (322)
T ss_pred CCccCCCCCC
Confidence 4999999844
No 144
>cd00421 intradiol_dioxygenase Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates. This family contains catechol 1,2-dioxygenases and protocatechuate 3,4-dioxygenases which are mononuclear non-heme iron enzymes that catalyze the oxygenation of catecholates to aliphatic acids via the cleavage of aromatic rings. The members are intradiol-cleaving enzymes which break the catechol C1-C2 bond and utilize Fe3+, as opposed to the extradiol-cleaving enzymes which break the C2-C3 or C1-C6 bond and utilize Fe2+ and Mn+. Catechol 1,2-dioxygenases are mostly homodimers with one catalytic ferric ion per monomer. Protocatechuate 3,4-dioxygenases form more diverse oligomers.
Probab=96.73 E-value=0.0046 Score=57.83 Aligned_cols=46 Identities=24% Similarity=0.504 Sum_probs=39.1
Q ss_pred ceeEEEEcCCCCcccceEEEEeeeee--------------------eeeeCCCeeE-EeeccCceEE
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYKNV--------------------SFMSSQRGEY-WRVLMPGIYF 554 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~~~--------------------~~~Td~~G~f-~~~l~~g~y~ 554 (651)
.|+|+|+|.+|.|+++|.|.|-.... ...||++|.| +..+.||.|.
T Consensus 13 ~l~G~V~D~~g~pv~~A~VeiW~~d~~G~Y~~~~~~~~~~~~~~rg~~~Td~~G~y~f~ti~Pg~Y~ 79 (146)
T cd00421 13 TLTGTVLDGDGCPVPDALVEIWQADADGRYSGQDDSGLDPEFFLRGRQITDADGRYRFRTIKPGPYP 79 (146)
T ss_pred EEEEEEECCCCCCCCCcEEEEEecCCCCccCCcCccccCCCCCCEEEEEECCCcCEEEEEEcCCCCC
Confidence 48999999999999999999864221 4679999999 7789999998
No 145
>TIGR03242 arg_catab_astE succinylglutamate desuccinylase. Members of this protein family are succinylglutamate desuccinylase, the fifth and final enzyme of the arginine succinyltransferase (AST) pathway for arginine catabolism. This model excludes the related protein aspartoacylase.
Probab=96.72 E-value=0.0013 Score=69.61 Aligned_cols=68 Identities=24% Similarity=0.171 Sum_probs=49.5
Q ss_pred CCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeE
Q psy8322 314 GVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLI 393 (651)
Q Consensus 314 ~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gv 393 (651)
..|.|++.||+||+|..|.+++..+++.+...- +--+.++.++ ++||.++.... |.. ..
T Consensus 40 ~gp~v~IsaGvHGNE~~Gi~~l~~ll~~l~~~~---------~~~~~~l~~i-~~Np~A~~~~~---------R~~--~~ 98 (319)
T TIGR03242 40 PQKSLVISAGIHGNETAPIEILEQLLGDIAAGK---------LPLRVRLLVI-LGNPPAMRTGK---------RYL--HD 98 (319)
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHhhhhhcc---------ccCCceEEEE-EcCHHHHHhCc---------ccC--CC
Confidence 458999999999999999999999998875321 1123445444 79999987433 322 25
Q ss_pred eeccCCCCC
Q psy8322 394 SLFLPFPVT 402 (651)
Q Consensus 394 dlnrnf~~~ 402 (651)
||||-||-.
T Consensus 99 DLNR~FpG~ 107 (319)
T TIGR03242 99 DLNRMFGGR 107 (319)
T ss_pred CccCCCCCc
Confidence 999999843
No 146
>PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length. Members of this family appear to be Actinomycete specific. The function of this family is unknown.
Probab=96.63 E-value=0.015 Score=47.78 Aligned_cols=54 Identities=19% Similarity=0.320 Sum_probs=45.1
Q ss_pred cceeEEEEcCCCCcccceEEEEeeee----eeeeeCCCeeEEeeccCceEEEEEEEeee
Q psy8322 508 RGVKGLVLDETGSRLANVSISLAYKN----VSFMSSQRGEYWRVLMPGIYFIEASKEGY 562 (651)
Q Consensus 508 ~~i~G~V~D~~g~pi~~A~V~i~~~~----~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy 562 (651)
..|+|+|+ .+|+|+++|.|.+.+.. ..+.|+..|.|..-..||+++|++...+=
T Consensus 8 ~VItG~V~-~~G~Pv~gAyVRLLD~sgEFtaEvvts~~G~FRFfaapG~WtvRal~~~g 65 (85)
T PF07210_consen 8 TVITGRVT-RDGEPVGGAYVRLLDSSGEFTAEVVTSATGDFRFFAAPGSWTVRALSRGG 65 (85)
T ss_pred EEEEEEEe-cCCcCCCCeEEEEEcCCCCeEEEEEecCCccEEEEeCCCceEEEEEccCC
Confidence 35999999 99999999999998743 35689999999666789999999866554
No 147
>PF10994 DUF2817: Protein of unknown function (DUF2817); InterPro: IPR021259 This family of proteins has no known function.
Probab=96.25 E-value=0.022 Score=60.63 Aligned_cols=83 Identities=23% Similarity=0.187 Sum_probs=63.2
Q ss_pred CCcceEEEEeeCCCccCCCCCeEEEeccccCCCc-chHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCce
Q psy8322 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEP-IGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE 374 (651)
Q Consensus 296 egr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~-~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~ 374 (651)
|.-.+-++.++... .+..+++.+|.||=|= .|+.+-+.+++.+. -..+.+++.+.+|=.+||=|+.
T Consensus 36 e~L~~Dva~lg~~~----a~~lLv~~SGtHGVEGf~GSaiQ~~~L~~~~---------~~~~~~~~avllVHAlNPyGfa 102 (341)
T PF10994_consen 36 EDLATDVAWLGPKD----ASRLLVLTSGTHGVEGFAGSAIQIALLREDL---------ARSLPAGVAVLLVHALNPYGFA 102 (341)
T ss_pred CcceeEEEEecCCC----CCeEEEEEecCCcccccccHHHHHHHHHccc---------ccccCCCCeEEEEEccCccccc
Confidence 33345566665432 4568888999999984 56666667776542 1356789999999999999999
Q ss_pred eeecccccCCCCCCCceeEeeccCCC
Q psy8322 375 LAVEGNCRSGRGRTPPFLISLFLPFP 400 (651)
Q Consensus 375 ~~~~~~~~~~kgr~~~~gvdlnrnf~ 400 (651)
... |.|-.+|||||||-
T Consensus 103 ~~R---------R~nE~NVDLNRNfl 119 (341)
T PF10994_consen 103 WLR---------RVNENNVDLNRNFL 119 (341)
T ss_pred eee---------ccCCcCcCcccccC
Confidence 888 89999999999993
No 148
>PF02369 Big_1: Bacterial Ig-like domain (group 1); InterPro: IPR003344 Proteins that contain this domain are found in a variety of bacterial and phage surface proteins such as intimins. Intimin is a bacterial cell-adhesion molecule that mediates the intimate bacterial host-cell interaction. It contains three domains; two immunoglobulin-like domains and a C-type lectin-like module implying that carbohydrate recognition may be important in intimin-mediated cell adhesion [].; PDB: 1CWV_A 4E9L_A 1F02_I 1F00_I.
Probab=95.63 E-value=0.064 Score=46.70 Aligned_cols=62 Identities=15% Similarity=0.227 Sum_probs=43.8
Q ss_pred ceeEEEEcCCCCcccceEEEE--eee--ee-----eeeeCCCeeE---EeeccCceEEEEEEEeeeeeEEEEEE
Q psy8322 509 GVKGLVLDETGSRLANVSISL--AYK--NV-----SFMSSQRGEY---WRVLMPGIYFIEASKEGYELFRDRIK 570 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i--~~~--~~-----~~~Td~~G~f---~~~l~~g~y~l~vs~~Gy~~~~~~v~ 570 (651)
.++-+|+|..|.||++..|.+ ... .. ...||++|.+ +..-.+|.|+|+++..|-......+.
T Consensus 26 tltatV~D~~gnpv~g~~V~f~~~~~~~~l~~~~~~~~Td~~G~a~~tltst~aG~~~VtA~~~~~~~~~~~~~ 99 (100)
T PF02369_consen 26 TLTATVTDANGNPVPGQPVTFSSSSSGGTLSPTNTSATTDSNGIATVTLTSTKAGTYTVTATVDGGSTSVTSVT 99 (100)
T ss_dssp EEEEEEEETTSEB-TS-EEEE--EESSSEES-CEE-EEE-TTSEEEEEEE-SS-EEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEcCCCCCCCCCEEEEEEcCCCcEEecCccccEECCCEEEEEEEEecCceEEEEEEEECCcceeEEeee
Confidence 488999999999999999999 221 11 2679999998 33467899999999998876655543
No 149
>KOG1948|consensus
Probab=95.59 E-value=0.03 Score=64.06 Aligned_cols=68 Identities=25% Similarity=0.263 Sum_probs=55.9
Q ss_pred cceeEEEEc-CCCCcccceEEEEeeeeeeeeeCCCeeE-Eee-ccCceEEEEEEEeeeeeEEEEEEeeCCCc
Q psy8322 508 RGVKGLVLD-ETGSRLANVSISLAYKNVSFMSSQRGEY-WRV-LMPGIYFIEASKEGYELFRDRIKIPESTS 576 (651)
Q Consensus 508 ~~i~G~V~D-~~g~pi~~A~V~i~~~~~~~~Td~~G~f-~~~-l~~g~y~l~vs~~Gy~~~~~~v~v~~~~~ 576 (651)
..++|+|.+ ..|.|+++|.|.+.+ +.+..||.+|.| +.+ +..|+|+|++.+.-++=.+..+.+..+..
T Consensus 316 fSvtGRVl~g~~g~~l~gvvvlvng-k~~~kTdaqGyykLen~~t~gtytI~a~kehlqFstv~~kv~pnta 386 (1165)
T KOG1948|consen 316 FSVTGRVLVGSKGLPLSGVVVLVNG-KSGGKTDAQGYYKLENLKTDGTYTITAKKEHLQFSTVHAKVKPNTA 386 (1165)
T ss_pred EEeeeeEEeCCCCCCccceEEEEcC-cccceEcccceEEeeeeeccCcEEEEEeccceeeeeEEEEecCCcc
Confidence 359999999 689999999999855 678899999999 556 88999999998888877666666654443
No 150
>PF00775 Dioxygenase_C: Dioxygenase; InterPro: IPR000627 This entry represents the C-terminal domain common to several intradiol ring-cleavage dioxygenases. Dioxygenases catalyse the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms. Cleavage of aromatic rings is one of the most important functions of dioxygenases, which play key roles in the degradation of aromatic compounds. The substrates of ring-cleavage dioxygenases can be classified into two groups according to the mode of scission of the aromatic ring. Intradiol enzymes use a non-haem Fe(III) to cleave the aromatic ring between two hydroxyl groups (ortho-cleavage), whereas extradiol enzymes (IPR000486 from INTERPRO) use a non-haem Fe(II) to cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon (meta-cleavage) []. These two subfamilies differ in sequence, structural fold, iron ligands, and the orientation of second sphere active site amino acid residues. Enzymes that belong to the intradiol family include catechol 1,2-dioxygenase (1,2-CTD) (1.13.11.1 from EC); protocatechuate 3,4-dioxygenase (3,4-PCD) (1.13.11.3 from EC); and chlorocatechol 1,2-dioxygenase (1.13.11.1 from EC) [].; GO: 0003824 catalytic activity, 0008199 ferric iron binding, 0006725 cellular aromatic compound metabolic process, 0055114 oxidation-reduction process; PDB: 2BUV_A 2BUX_A 2BUU_A 2BUR_A 1EO9_A 2BUZ_A 2BV0_A 1EO2_A 1EOC_A 1EOA_A ....
Probab=95.58 E-value=0.049 Score=52.88 Aligned_cols=46 Identities=24% Similarity=0.470 Sum_probs=32.6
Q ss_pred ceeEEEEcCCCCcccceEEEEeee--------------------eeeeeeCCCeeE-EeeccCceEE
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYK--------------------NVSFMSSQRGEY-WRVLMPGIYF 554 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~--------------------~~~~~Td~~G~f-~~~l~~g~y~ 554 (651)
.|+|+|+|.+|+||++|.|.|=-. .-...||++|.| +..+.||.|.
T Consensus 31 ~l~G~V~D~~g~Pv~~A~veiWqada~G~Ys~~~~~~~~~~~~~rG~~~Td~~G~y~f~Ti~Pg~Y~ 97 (183)
T PF00775_consen 31 VLHGRVIDTDGKPVPGALVEIWQADADGRYSGQDPGSDQPDFNLRGRFRTDADGRYSFRTIKPGPYP 97 (183)
T ss_dssp EEEEEEEETTSSB-TTEEEEEEE--TTS--TTTBTTSSSSTTTTEEEEEECTTSEEEEEEE----EE
T ss_pred EEEEEEECCCCCCCCCcEEEEEecCCCCccccccccccccCCCcceEEecCCCCEEEEEeeCCCCCC
Confidence 489999999999999999998311 014579999999 7778888876
No 151
>cd03458 Catechol_intradiol_dioxygenases Catechol intradiol dioxygenases can be divided into several subgroups according to their substrate specificity for catechol, chlorocatechols and hydroxyquinols. Almost all members of this family are homodimers containing one ferric ion (Fe3+) per monomer. They belong to the intradiol dioxygenase family, a family of mononuclear non-heme iron intradiol-cleaving enzymes that catalyze the oxygenation of catecholates to aliphatic acids via the cleavage of aromatic rings.
Probab=95.53 E-value=0.041 Score=55.94 Aligned_cols=64 Identities=27% Similarity=0.444 Sum_probs=48.3
Q ss_pred ceeEEEEcCCCCcccceEEEEeeee------------------eeeeeCCCeeE-EeeccCceE----------------
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYKN------------------VSFMSSQRGEY-WRVLMPGIY---------------- 553 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~~------------------~~~~Td~~G~f-~~~l~~g~y---------------- 553 (651)
.++|+|+|.+|+||++|.|.|=-.+ -...||++|.| +..+.||.|
T Consensus 106 ~l~G~V~D~~G~Pv~~A~VeiWqad~~G~Y~~~~~~~~~~~lRG~~~Td~~G~y~f~Ti~P~~Ypip~dGp~g~lL~~~g 185 (256)
T cd03458 106 FVHGTVTDTDGKPLAGATVDVWHADPDGFYSQQDPDQPEFNLRGKFRTDEDGRYRFRTIRPVPYPIPPDGPTGELLEALG 185 (256)
T ss_pred EEEEEEEcCCCCCCCCcEEEEEccCCCCCcCCCCCCCCCCCCEEEEEeCCCCCEEEEEECCCCccCCCCCcHHHHHHhcc
Confidence 4899999999999999999984211 14679999999 777888766
Q ss_pred ---------EEEEEEeeeeeEEEEEEee
Q psy8322 554 ---------FIEASKEGYELFRDRIKIP 572 (651)
Q Consensus 554 ---------~l~vs~~Gy~~~~~~v~v~ 572 (651)
.+.|++.||.+.+-++-..
T Consensus 186 rh~~RpaHIHf~V~a~G~~~LtTqlyf~ 213 (256)
T cd03458 186 RHPWRPAHIHFMVSAPGYRTLTTQIYFE 213 (256)
T ss_pred cCCCCCCeEEEEEECCCcceeeEEEecC
Confidence 5567888886655555443
No 152
>PF14686 fn3_3: Polysaccharide lyase family 4, domain II; PDB: 1NKG_A 2XHN_B 3NJX_A 3NJV_A.
Probab=95.26 E-value=0.1 Score=45.02 Aligned_cols=64 Identities=27% Similarity=0.403 Sum_probs=33.4
Q ss_pred ceeEEEEcCCC---Ccc-cceEEEEe-------ee--eeeeeeCCCeeE-EeeccCceEEEEEEEee----eeeEEEEEE
Q psy8322 509 GVKGLVLDETG---SRL-ANVSISLA-------YK--NVSFMSSQRGEY-WRVLMPGIYFIEASKEG----YELFRDRIK 570 (651)
Q Consensus 509 ~i~G~V~D~~g---~pi-~~A~V~i~-------~~--~~~~~Td~~G~f-~~~l~~g~y~l~vs~~G----y~~~~~~v~ 570 (651)
.|+|+|.-.+| .|. ..+.|-+. +. ..-+.+|.+|.| +.++.||+|+|.+=..| |...+..|+
T Consensus 4 ~VsG~l~l~dg~~~~~~~~~~~Vgl~~~~d~~q~~~yqYwt~td~~G~Fti~~V~pGtY~L~ay~~g~~g~~~~~~~~It 83 (95)
T PF14686_consen 4 SVSGRLTLSDGVTNPPAGANAVVGLAPPGDFQQNKGYQYWTRTDSDGNFTIPNVRPGTYRLYAYADGIFGDYKVASDSIT 83 (95)
T ss_dssp EEEEEEE---SS--TT--S-EEEEEE--------SS-EEEEE--TTSEEE---B-SEEEEEEEEE----TTEEEEEEEEE
T ss_pred EEEEEEEEccCcccCccceeEEEEeeeccccccCCCCcEEEEeCCCCcEEeCCeeCcEeEEEEEEecccCceEEecceEE
Confidence 48999885544 343 33455554 21 235779999999 77899999999997744 433345555
Q ss_pred ee
Q psy8322 571 IP 572 (651)
Q Consensus 571 v~ 572 (651)
|.
T Consensus 84 V~ 85 (95)
T PF14686_consen 84 VS 85 (95)
T ss_dssp E-
T ss_pred Ec
Confidence 55
No 153
>PF05738 Cna_B: Cna protein B-type domain; InterPro: IPR008454 This entry represents a repeated B region domain found in the collagen-binding surface protein Cna in Staphylococcus aureus, as well as other related domains. The B region domain of Cna has a prealbumin-like beta-sandwich fold of seven strands in two sheets with a Greek key topology []. However, this domain does not mediate collagen binding, the IPR008456 from INTERPRO region carries out that function; instead it appears to form a stalk that presents the ligand binding domain away from the bacterial cell surface. Cna is a collagen-binding MSCRAMM (Microbial Surface Component Recognizing Adhesive Matrix Molecules), and is necessary and sufficient for S. aureus cells to adhere to cartilage.; PDB: 2X5P_A 3RKP_A 3KPT_A 1VLF_T 1TI2_F 1TI6_D 1TI4_J 1VLE_V 1VLD_X 3PF2_A ....
Probab=95.23 E-value=0.082 Score=42.45 Aligned_cols=47 Identities=28% Similarity=0.613 Sum_probs=35.7
Q ss_pred ccceEEEEeeee----e--eeeeCCCeeE-EeeccCceEEEEEEE--eeeeeEEEE
Q psy8322 522 LANVSISLAYKN----V--SFMSSQRGEY-WRVLMPGIYFIEASK--EGYELFRDR 568 (651)
Q Consensus 522 i~~A~V~i~~~~----~--~~~Td~~G~f-~~~l~~g~y~l~vs~--~Gy~~~~~~ 568 (651)
|+||++.|.... . ..+||++|.| +..|++|.|.|+... .||......
T Consensus 1 L~Ga~f~L~~~~~~~~~~~~~~Td~~G~~~f~~L~~G~Y~l~E~~aP~GY~~~~~~ 56 (70)
T PF05738_consen 1 LAGATFELYDEDGNEVIEVTVTTDENGKYTFKNLPPGTYTLKETKAPDGYQLDDTP 56 (70)
T ss_dssp -STEEEEEEETTSEEEEEEEEEGGTTSEEEEEEEESEEEEEEEEETTTTEEEEECE
T ss_pred CCCeEEEEEECCCCEEEEEEEEECCCCEEEEeecCCeEEEEEEEECCCCCEECCCc
Confidence 567888876532 1 2679999999 778999999999877 899875543
No 154
>COG4073 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.21 E-value=0.036 Score=51.47 Aligned_cols=76 Identities=21% Similarity=0.287 Sum_probs=57.3
Q ss_pred EEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCC
Q psy8322 82 KIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQ 161 (651)
Q Consensus 82 ~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRn 161 (651)
+++||.||+||-.++-++. ++.|-. .+-++.|+|.+|+-=|.-+. |-.
T Consensus 18 lfV~GlHGdEgk~te~ilr-l~~~~~-------------~ng~l~Vip~v~n~~YISTl------------------dp~ 65 (198)
T COG4073 18 LFVGGLHGDEGKATEPILR-LRVLPE-------------ENGVLRVIPKVENGPYISTL------------------DPS 65 (198)
T ss_pred EEEeeccCcccchhhhhhh-hcccCc-------------cCceEEEEeccCCCCceeec------------------Chh
Confidence 8899999999998888776 332221 24589999999887776332 222
Q ss_pred CCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecC
Q psy8322 162 FPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGG 208 (651)
Q Consensus 162 f~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~ 208 (651)
| ...++-+.+.+.+++++|.+++.+|+|
T Consensus 66 y-------------------y~s~~G~~ilr~vek~rP~vY~ElH~Y 93 (198)
T COG4073 66 Y-------------------YRSEVGARILRVVEKLRPDVYVELHCY 93 (198)
T ss_pred h-------------------ccchhhHHHHHHHHHhCCceEEEEeec
Confidence 2 234677889999999999999999999
No 155
>TIGR02465 chlorocat_1_2 chlorocatechol 1,2-dioxygenase. Members of this protein family are chlorocatechol 1,2-dioxygenase. This protein is closely related to catechol 1,2-dioxygenase, TIGR02439, EC 1.13.11.1. Note that annotated database entries have appeared for the present protein family with the EC number that refers to that of family TIGR02439. This protein acts in pathways of the biodegradation of chlorinated aromatic compounds.
Probab=95.11 E-value=0.062 Score=54.38 Aligned_cols=64 Identities=22% Similarity=0.371 Sum_probs=47.8
Q ss_pred ceeEEEEcCCCCcccceEEEEeeee------------------eeeeeCCCeeE-EeeccCceE----------------
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYKN------------------VSFMSSQRGEY-WRVLMPGIY---------------- 553 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~~------------------~~~~Td~~G~f-~~~l~~g~y---------------- 553 (651)
.|+|+|+|.+|+||++|.|.|=-.+ -...||++|.| +..+.||.|
T Consensus 100 ~v~G~V~D~~G~Pv~~A~VeiWqad~~G~Y~~~~~~~~~~~lRG~~~Td~~G~y~F~Ti~P~~YpiP~dgp~g~lL~~~g 179 (246)
T TIGR02465 100 LIRGTVRDLSGTPVAGAVIDVWHSTPDGKYSGFHDNIPDDYYRGKLVTAADGSYEVRTTMPVPYQIPDAGPTGALLETMG 179 (246)
T ss_pred EEEEEEEcCCCCCcCCcEEEEECCCCCCCCCCCCCCCCCCCCeEEEEECCCCCEEEEEECCCCCCCCCCCchHHHHHhcc
Confidence 4899999999999999999984210 14578999999 777777766
Q ss_pred ---------EEEEEEeeeeeEEEEEEee
Q psy8322 554 ---------FIEASKEGYELFRDRIKIP 572 (651)
Q Consensus 554 ---------~l~vs~~Gy~~~~~~v~v~ 572 (651)
.+.|++.||.+.+.++-..
T Consensus 180 rh~~RpaHIH~~V~a~G~~~L~Tqiyf~ 207 (246)
T TIGR02465 180 RHSWRPAHVHYKVRADGYRPLTTQAYFE 207 (246)
T ss_pred cCCCCCCeEEEEEECCCcCceEEeEecC
Confidence 4567888887665555443
No 156
>cd03462 1,2-CCD chlorocatechol 1,2-dioxygenases (1,2-CCDs) (type II enzymes) are homodimeric intradiol dioxygenases that degrade chlorocatechols via the addition of molecular oxygen and the subsequent cleavage between two adjacent hydroxyl groups. This reaction is part of the modified ortho-cleavage pathway which is a central oxidative bacterial pathway that channels chlorocatechols, derived from the degradation of chlorinated benzoic acids, phenoxyacetic acids, phenols, benzenes, and other aromatics into the energy-generating tricarboxylic acid pathway.
Probab=95.07 E-value=0.069 Score=54.03 Aligned_cols=64 Identities=22% Similarity=0.370 Sum_probs=48.0
Q ss_pred ceeEEEEcCCCCcccceEEEEeeee------------------eeeeeCCCeeE-EeeccCceE----------------
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYKN------------------VSFMSSQRGEY-WRVLMPGIY---------------- 553 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~~------------------~~~~Td~~G~f-~~~l~~g~y---------------- 553 (651)
.++|+|+|.+|+||++|.|.|=-.+ -...||++|.| +..+.||.|
T Consensus 101 ~l~G~V~D~~G~Pv~~A~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~Td~~G~y~F~Ti~P~~YpiP~dGp~g~lL~~~g 180 (247)
T cd03462 101 LFRGTVKDLAGAPVAGAVIDVWHSTPDGKYSGFHPNIPEDYYRGKIRTDEDGRYEVRTTVPVPYQIPNDGPTGALLEAMG 180 (247)
T ss_pred EEEEEEEcCCCCCcCCcEEEEECCCCCCCcCCCCCCCCCCCCEEEEEeCCCCCEEEEEECCCCcCCCCCCcHHHHHHhcc
Confidence 4899999999999999999984210 14578999999 677777665
Q ss_pred ---------EEEEEEeeeeeEEEEEEee
Q psy8322 554 ---------FIEASKEGYELFRDRIKIP 572 (651)
Q Consensus 554 ---------~l~vs~~Gy~~~~~~v~v~ 572 (651)
.+.|++.||.+.+.++-..
T Consensus 181 rh~~RpaHIHf~V~a~G~~~L~Tqlyf~ 208 (247)
T cd03462 181 GHSWRPAHVHFKVRADGYETLTTQLYFE 208 (247)
T ss_pred cCCCCCCeEEEEEECCCcCceEEEEecC
Confidence 4567888887665555444
No 157
>TIGR02439 catechol_proteo catechol 1,2-dioxygenase, proteobacterial. Members of this family known so far are catechol 1,2-dioxygenases of the Proteobacteria. They are distinct from catechol 1,2-dioxygenases and chlorocatechol 1,2-dioxygenases of the Actinobacteria, which are quite similar to each other and resolved by separate models. This enzyme catalyzes intradiol cleavage in which catechol + O2 becomes cis,cis-muconate. Catechol is an intermediate in the catabolism of many different aromatic compounds, as is the alternative intermediate protocatechuate. In Acinetobacter lwoffii, two isozymes are present with abilities, differing somewhat, to act on catechol analogs 3-methylcatechol, 4-methylcatechol, 4-methoxycatechol, and 4-chlorocatechol.
Probab=95.00 E-value=0.072 Score=55.04 Aligned_cols=64 Identities=25% Similarity=0.387 Sum_probs=48.8
Q ss_pred ceeEEEEcCCCCcccceEEEEeeee------------------eeeeeCCCeeE-EeeccCceE----------------
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYKN------------------VSFMSSQRGEY-WRVLMPGIY---------------- 553 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~~------------------~~~~Td~~G~f-~~~l~~g~y---------------- 553 (651)
.|+|+|+|.+|+||++|.|.|=-.+ -...||++|.| +..+.|+.|
T Consensus 130 ~v~G~V~D~~G~PI~gA~VeIWqad~~G~Ys~~~~~~~~~~lRG~~~TD~~G~y~F~TI~P~~YpiP~dGp~g~lL~~~g 209 (285)
T TIGR02439 130 FLHGQVTDADGKPIAGAKVELWHANTKGNYSHFDKSQSEFNLRRTIITDAEGRYRARSIVPSGYGCPPQGPTQQLLNLLG 209 (285)
T ss_pred EEEEEEECCCCCCcCCcEEEEEccCCCCCcCCCCCCCCCCCceEEEEECCCCCEEEEEECCCCCcCCCCCcHHHHHHhcc
Confidence 4899999999999999999984210 14579999999 777777766
Q ss_pred ---------EEEEEEeeeeeEEEEEEee
Q psy8322 554 ---------FIEASKEGYELFRDRIKIP 572 (651)
Q Consensus 554 ---------~l~vs~~Gy~~~~~~v~v~ 572 (651)
.+.|++.||++.+.++-..
T Consensus 210 rh~~RpaHIHf~V~a~G~~~LtTQiyf~ 237 (285)
T TIGR02439 210 RHGNRPAHVHFFVSAPGHRKLTTQINIE 237 (285)
T ss_pred CCCCCCCeEEEEEecCCCCeeEEEEecC
Confidence 4568888887766666554
No 158
>cd03459 3,4-PCD Protocatechuate 3,4-dioxygenase (3,4-PCD) catalyzes the oxidative ring cleavage of 3,4-dihydroxybenzoate to produce beta-carboxy-cis,cis-muconate. 3,4-PCDs are large aggregates of 12 protomers, each composed of an alpha- and beta-subunit and an Fe3+ ion bound in the beta-subunit at the alpha-beta-subunit interface. 3,4-PCD is a member of the aromatic dioxygenases which are non-heme iron intradiol-cleaving enzymes that break the C1-C2 bond and utilize Fe3+.
Probab=94.94 E-value=0.073 Score=50.38 Aligned_cols=63 Identities=24% Similarity=0.445 Sum_probs=45.7
Q ss_pred ceeEEEEcCCCCcccceEEEEeee-------------------e----eeeeeCCCeeE-EeeccCceEE----------
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYK-------------------N----VSFMSSQRGEY-WRVLMPGIYF---------- 554 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~-------------------~----~~~~Td~~G~f-~~~l~~g~y~---------- 554 (651)
.|+|+|+|.+|+||++|.|.|=-. . -...||.+|.| +..+.||.|.
T Consensus 17 ~l~g~V~D~~g~Pv~~A~veiWqad~~G~Y~~~~~~~~~~~~~~f~~rG~~~Td~~G~~~f~Ti~Pg~Y~~p~~~~R~~H 96 (158)
T cd03459 17 ILEGRVLDGDGRPVPDALVEIWQADAAGRYRHPRDSHRAPLDPNFTGFGRVLTDADGRYRFRTIKPGAYPWRNGAWRAPH 96 (158)
T ss_pred EEEEEEECCCCCCCCCCEEEEEccCCCCccCCccCCcccccCCCCCceeEEEECCCCcEEEEEECCCCcCCCCCCCcCCE
Confidence 489999999999999999998310 0 13579999999 7788999887
Q ss_pred --EEEEEeee-eeEEEEEEe
Q psy8322 555 --IEASKEGY-ELFRDRIKI 571 (651)
Q Consensus 555 --l~vs~~Gy-~~~~~~v~v 571 (651)
+.|.+.|| ...+-++-.
T Consensus 97 IH~~V~~~g~~~~L~Tqlyf 116 (158)
T cd03459 97 IHVSVFARGLLERLVTRLYF 116 (158)
T ss_pred EEEEEECCCcccceEEeEec
Confidence 34556666 444444433
No 159
>cd03460 1,2-CTD Catechol 1,2 dioxygenase (1,2-CTD) catalyzes an intradiol cleavage reaction of catechol to form cis,cis-muconate. 1,2-CTDs is homodimers with one catalytic non-heme ferric ion per monomer. They belong to the aromatic dioxygenase family, a family of mononuclear non-heme iron intradiol-cleaving enzymes that catalyze the oxygenation of catecholates to aliphatic acids via the cleavage of aromatic rings.
Probab=94.89 E-value=0.079 Score=54.63 Aligned_cols=65 Identities=25% Similarity=0.410 Sum_probs=48.9
Q ss_pred ceeEEEEcCCCCcccceEEEEeeee------------------eeeeeCCCeeE-EeeccCceE----------------
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYKN------------------VSFMSSQRGEY-WRVLMPGIY---------------- 553 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~~------------------~~~~Td~~G~f-~~~l~~g~y---------------- 553 (651)
.++|+|+|.+|+||++|.|.|=-.+ -...||++|.| +..+.||.|
T Consensus 126 ~l~G~V~D~~G~PI~~A~VeiWqad~~G~Ys~~~~~~~~f~~RGr~~TD~~G~y~F~TI~P~~YpiP~dGp~g~lL~~~g 205 (282)
T cd03460 126 VMHGTVTDTDGKPVPGAKVEVWHANSKGFYSHFDPTQSPFNLRRSIITDADGRYRFRSIMPSGYGVPPGGPTQQLLNALG 205 (282)
T ss_pred EEEEEEECCCCCCcCCcEEEEECCCCCCCcCCCCCCCCCCCCceEEEeCCCCCEEEEEECCCCCcCCCCCcHHHHHHhhc
Confidence 4899999999999999999984110 14579999999 777777766
Q ss_pred ---------EEEEEEeeeeeEEEEEEeeC
Q psy8322 554 ---------FIEASKEGYELFRDRIKIPE 573 (651)
Q Consensus 554 ---------~l~vs~~Gy~~~~~~v~v~~ 573 (651)
.+.|++.||++.+.++-...
T Consensus 206 rh~~RpaHIHf~V~a~G~~~LtTqlyf~g 234 (282)
T cd03460 206 RHGNRPAHIHFFVSAPGHRKLTTQINIEG 234 (282)
T ss_pred CCCCCCCeEEEEEecCCcCceEEEEecCC
Confidence 45678888876666655443
No 160
>TIGR02438 catachol_actin catechol 1,2-dioxygenase, Actinobacterial. Members of this family are catechol 1,2-dioxygenases of the Actinobacteria. They are more closely related to actinobacterial chlorocatechol 1,2-dioxygenases than to proteobacterial catechol 1,2-dioxygenases, and so are built in this separate model. The member from Rhodococcus rhodochrous NCIMB 13259 (GB|AAC33003.1) is described as a homodimer with bound Fe, similarly active on catechol, 3-methylcatechol and 4-methylcatechol.
Probab=94.65 E-value=0.094 Score=54.02 Aligned_cols=65 Identities=22% Similarity=0.332 Sum_probs=48.4
Q ss_pred ceeEEEEcCCCCcccceEEEEe--e---e-------------eeeeeeCCCeeE-EeeccCceEE---------------
Q psy8322 509 GVKGLVLDETGSRLANVSISLA--Y---K-------------NVSFMSSQRGEY-WRVLMPGIYF--------------- 554 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~--~---~-------------~~~~~Td~~G~f-~~~l~~g~y~--------------- 554 (651)
.|+|+|+|.+|+||++|.|.|= + . .-...||++|.| +..+.||.|.
T Consensus 134 ~v~G~V~D~~G~Pv~gA~VdiWqada~G~Ys~~~~~~~~~~lRGr~~TDadG~y~F~TI~Pg~YpiP~dGp~G~lL~~~G 213 (281)
T TIGR02438 134 VFSGQVTDLDGNGLAGAKVELWHADDDGFYSQFAPGIPEWNLRGTIIADDEGRFEITTMQPAPYQIPTDGPTGKFIAAAG 213 (281)
T ss_pred EEEEEEEcCCCCCcCCCEEEEEecCCCCCcCCCCCCCCCCCCeEEEEeCCCCCEEEEEECCCCcCCCCCCchHHHHHhcc
Confidence 4899999999999999999992 1 1 114578999999 6677776654
Q ss_pred ----------EEEEEeeeeeEEEEEEeeC
Q psy8322 555 ----------IEASKEGYELFRDRIKIPE 573 (651)
Q Consensus 555 ----------l~vs~~Gy~~~~~~v~v~~ 573 (651)
+.|++.||++.+-++-...
T Consensus 214 rh~~RpaHIHf~V~a~G~~~LtTqiyf~g 242 (281)
T TIGR02438 214 GHPWRPAHLHLKVSAPGHELITTQLYFKG 242 (281)
T ss_pred cCCCCCCEEEEEEECCCcceEEEeEecCC
Confidence 5578888877666655543
No 161
>cd03463 3,4-PCD_alpha Protocatechuate 3,4-dioxygenase (3,4-PCD) , alpha subunit. 3,4-PCD catalyzes the oxidative ring cleavage of 3,4-dihydroxybenzoate to produce beta-carboxy-cis,cis-muconate. 3,4-PCDs are large aggregates of 12 protomers, each composed of an alpha- and beta-subunit and an Fe3+ ion bound in the beta-subunit at the alpha-subunit-beta-subunit interface. 3,4-PCD is a member of the aromatic dioxygenases which are non-heme iron intradiol-cleaving enzymes that break the C1-C2 bond and utilize Fe3+.
Probab=94.61 E-value=0.084 Score=51.26 Aligned_cols=46 Identities=15% Similarity=0.357 Sum_probs=36.7
Q ss_pred ceeEEEEcCCCCcccceEEEEeee------------------ee----eeeeCCCeeE-EeeccCceEE
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYK------------------NV----SFMSSQRGEY-WRVLMPGIYF 554 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~------------------~~----~~~Td~~G~f-~~~l~~g~y~ 554 (651)
.|+|+|+|.+|+||++|.|.|=-. .. ...||++|.| +..+.||.|.
T Consensus 38 ~l~G~V~D~~g~Pi~gA~VeiWqad~~G~Y~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~Ti~Pg~Y~ 106 (185)
T cd03463 38 TLEGRVYDGDGAPVPDAMLEIWQADAAGRYAHPADSRRRLDPGFRGFGRVATDADGRFSFTTVKPGAVP 106 (185)
T ss_pred EEEEEEECCCCCCCCCCEEEEEcCCCCCccCCcCCcccccCCCCCcEEEEEECCCCCEEEEEEcCCCcC
Confidence 489999999999999999998421 00 3579999999 7778888875
No 162
>cd03461 1,2-HQD Hydroxyquinol 1,2-dioxygenase (1,2-HQD) catalyzes the ring cleavage of hydroxyquinol (1,2,4-trihydroxybenzene), a intermediate in the degradation of a large variety of aromatic compounds including some polychloro- and nitroaromatic pollutants, to form 3-hydroxy-cis,cis-muconates. 1,2-HQD blongs to the aromatic dioxygenase family, a family of mononuclear non-heme intradiol-cleaving enzymes.
Probab=94.47 E-value=0.09 Score=54.14 Aligned_cols=64 Identities=25% Similarity=0.380 Sum_probs=48.2
Q ss_pred ceeEEEEcCCCCcccceEEEEeee------------------eeeeeeCCCeeE-EeeccCceEE---------------
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYK------------------NVSFMSSQRGEY-WRVLMPGIYF--------------- 554 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~------------------~~~~~Td~~G~f-~~~l~~g~y~--------------- 554 (651)
.++|+|+|..|+||++|.|.|=-. .-...||++|.| +..+.||.|.
T Consensus 122 ~v~G~V~D~~G~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~lRGr~~Td~~G~y~F~Ti~Pg~Ypip~dGp~g~lL~~~g 201 (277)
T cd03461 122 FVHGRVTDTDGKPLPGATVDVWQADPNGLYDVQDPDQPEFNLRGKFRTDEDGRYAFRTLRPTPYPIPTDGPVGKLLKAMG 201 (277)
T ss_pred EEEEEEEcCCCCCcCCcEEEEECcCCCCCcCCCCCCCCCCCCeEEEEeCCCCCEEEEEECCCCcCCCCCCcHHHHHHhhh
Confidence 489999999999999999998421 114679999999 7777777664
Q ss_pred ----------EEEEEeeeeeEEEEEEee
Q psy8322 555 ----------IEASKEGYELFRDRIKIP 572 (651)
Q Consensus 555 ----------l~vs~~Gy~~~~~~v~v~ 572 (651)
+.|++.||.+.+-++-..
T Consensus 202 rh~~RpaHIHf~V~a~G~~~L~Tqlyf~ 229 (277)
T cd03461 202 RHPMRPAHIHFMVTAPGYRTLVTQIFDS 229 (277)
T ss_pred ccCCCCCeEEEEEEcCCcCceEEeEecC
Confidence 567888887665555444
No 163
>TIGR02423 protocat_alph protocatechuate 3,4-dioxygenase, alpha subunit. This model represents the alpha chain of protocatechuate 3,4-dioxygenase. The most closely related family outside this family is that of the beta chain (TIGR02422), typically encoded in an adjacent locus. This enzyme acts in the degradation of aromatic compounds by way of p-hydroxybenzoate to succinate and acetyl-CoA.
Probab=94.46 E-value=0.091 Score=51.35 Aligned_cols=47 Identities=21% Similarity=0.327 Sum_probs=37.2
Q ss_pred ceeEEEEcCCCCcccceEEEEeee-------------------e----eeeeeCCCeeE-EeeccCceEEE
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYK-------------------N----VSFMSSQRGEY-WRVLMPGIYFI 555 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~-------------------~----~~~~Td~~G~f-~~~l~~g~y~l 555 (651)
.|+|+|+|.+|+||++|.|.|=-. . -...||++|.| +..+.||.|..
T Consensus 41 ~l~G~V~D~~g~Pv~~A~VeiWqad~~G~Y~~~~~~~~~~~~~~f~grGr~~Td~~G~y~f~TI~Pg~Yp~ 111 (193)
T TIGR02423 41 RLEGRVLDGDGHPVPDALIEIWQADAAGRYNSPADLRAPATDPGFRGWGRTGTDESGEFTFETVKPGAVPD 111 (193)
T ss_pred EEEEEEECCCCCCCCCCEEEEEccCCCCccCCccCCcccccCCCCCCeEEEEECCCCCEEEEEEcCCCcCC
Confidence 489999999999999999998310 0 13578999999 77788987754
No 164
>smart00634 BID_1 Bacterial Ig-like domain (group 1).
Probab=94.26 E-value=0.17 Score=43.18 Aligned_cols=59 Identities=17% Similarity=0.173 Sum_probs=44.8
Q ss_pred ceeEEEEcCCCCcccceEEEEeeee--------eeeeeCCCeeEE---eeccCceEEEEEEEeeeeeEEE
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYKN--------VSFMSSQRGEYW---RVLMPGIYFIEASKEGYELFRD 567 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~~--------~~~~Td~~G~f~---~~l~~g~y~l~vs~~Gy~~~~~ 567 (651)
.|+-+|+|+.|.|++++.|.+.-.. ....||.+|... ....+|.++|+++..|+.....
T Consensus 21 ~i~v~v~D~~Gnpv~~~~V~f~~~~~~~~~~~~~~~~Td~~G~a~~~l~~~~~G~~~vta~~~~~~~~~~ 90 (92)
T smart00634 21 TLTATVTDANGNPVAGQEVTFTTPSGGALTLSKGTATTDANGIATVTLTSTTAGVYTVTASLENGSSSVK 90 (92)
T ss_pred EEEEEEECCCCCCcCCCEEEEEECCCceeeccCCeeeeCCCCEEEEEEECCCCcEEEEEEEECCCcceee
Confidence 4889999999999999998876321 234689999972 2346788999999888865543
No 165
>cd03464 3,4-PCD_beta Protocatechuate 3,4-dioxygenase (3,4-PCD) , beta subunit. 3,4-PCD catalyzes the oxidative ring cleavage of 3,4-dihydroxybenzoate to produce beta-carboxy-cis,cis-muconate. 3,4-PCDs are large aggregates of 12 protomers, each composed of an alpha- and beta-subunit and an Fe3+ ion bound in the beta-subunit at the alpha-subunit-beta-subunit interface. 3,4-PCD is a member of the aromatic dioxygenases which are non-heme iron intradiol-cleaving enzymes that break the C1-C2 bond and utilize Fe3+.
Probab=94.21 E-value=0.16 Score=50.56 Aligned_cols=46 Identities=30% Similarity=0.490 Sum_probs=36.6
Q ss_pred ceeEEEEcCCCCcccceEEEEeee-----------------------eeeeeeCCCeeE-EeeccCceEE
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYK-----------------------NVSFMSSQRGEY-WRVLMPGIYF 554 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~-----------------------~~~~~Td~~G~f-~~~l~~g~y~ 554 (651)
.|+|+|+|.+|+||++|.|.|=-. .-...||++|.| +..+.||.|.
T Consensus 67 ~l~G~V~D~~G~PV~~A~VEIWQad~~G~Y~~~~d~~~~~~~~~f~grGr~~TD~~G~y~F~TI~Pg~Yp 136 (220)
T cd03464 67 IVHGRVLDEDGRPVPNTLVEIWQANAAGRYRHKRDQHDAPLDPNFGGAGRTLTDDDGYYRFRTIKPGAYP 136 (220)
T ss_pred EEEEEEECCCCCCCCCCEEEEEecCCCCcccCccCCcccccCCCCCCEEEEEECCCccEEEEEECCCCcc
Confidence 488999999999999999988421 014478999999 7778888874
No 166
>TIGR02422 protocat_beta protocatechuate 3,4-dioxygenase, beta subunit. This model represents the beta chain of protocatechuate 3,4-dioxygenase. The most closely related family outside this family is that of the alpha chain (TIGR02423), typically encoded in an adjacent locus. This enzyme acts in the degradation of aromatic compounds by way of p-hydroxybenzoate to succinate and acetyl-CoA.
Probab=93.96 E-value=0.23 Score=49.52 Aligned_cols=47 Identities=30% Similarity=0.429 Sum_probs=37.1
Q ss_pred ceeEEEEcCCCCcccceEEEEeee-----------------------eeeeeeCCCeeE-EeeccCceEEE
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYK-----------------------NVSFMSSQRGEY-WRVLMPGIYFI 555 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~-----------------------~~~~~Td~~G~f-~~~l~~g~y~l 555 (651)
.|+|+|+|.+|+||++|.|.|=-. .-...||++|.| +..+.||.|.+
T Consensus 62 ~l~G~V~D~~g~PV~~A~VEIWQada~G~Y~~~~d~~~~~~~~~f~grGr~~TD~~G~y~F~TI~PG~Y~~ 132 (220)
T TIGR02422 62 IVHGRVLDEDGRPVPNTLVEVWQANAAGRYRHKNDQYLAPLDPNFGGVGRTLTDSDGYYRFRTIKPGPYPW 132 (220)
T ss_pred EEEEEEECCCCCCCCCCEEEEEecCCCCcccCccCccccccCCCCCCEEEEEECCCccEEEEEECCCCccC
Confidence 489999999999999999998421 013568999999 77788988743
No 167
>COG3485 PcaH Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.74 E-value=0.1 Score=52.06 Aligned_cols=46 Identities=26% Similarity=0.495 Sum_probs=36.5
Q ss_pred cceeEEEEcCCCCcccceEEEEeee----------------------eeeeeeCCCeeE-EeeccCceE
Q psy8322 508 RGVKGLVLDETGSRLANVSISLAYK----------------------NVSFMSSQRGEY-WRVLMPGIY 553 (651)
Q Consensus 508 ~~i~G~V~D~~g~pi~~A~V~i~~~----------------------~~~~~Td~~G~f-~~~l~~g~y 553 (651)
..|+|+|+|.+|.||++|.|.|=-. .-.+.||++|.| +..+.||.|
T Consensus 73 i~l~G~VlD~~G~Pv~~A~VEiWQAda~GrY~~~~d~~~~~~~~f~g~Gr~~Td~~G~y~F~Ti~Pg~y 141 (226)
T COG3485 73 ILLEGRVLDGNGRPVPDALVEIWQADADGRYSHPKDSRLAPLPNFNGRGRTITDEDGEYRFRTIKPGPY 141 (226)
T ss_pred EEEEEEEECCCCCCCCCCEEEEEEcCCCCcccCccccccCcCccccceEEEEeCCCceEEEEEeecccc
Confidence 4599999999999999999998310 013579999999 777888776
No 168
>PF12985 DUF3869: Domain of unknown function (DUF3869); InterPro: IPR024620 This functionally uncharacterised domain is found in bacterial sequences, including the N-terminal region of a putative pore-forming toxin (YP_001301288.1) from Bacteroides vulgatus ATCC 8482.; PDB: 3G3L_A 3KOG_A.
Probab=92.94 E-value=0.51 Score=40.88 Aligned_cols=71 Identities=23% Similarity=0.330 Sum_probs=47.8
Q ss_pred hccceeEEEEc-CCCCccc-ceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeC---CCc--eE
Q psy8322 506 VHRGVKGLVLD-ETGSRLA-NVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPE---STS--PV 578 (651)
Q Consensus 506 a~~~i~G~V~D-~~g~pi~-~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~---~~~--~~ 578 (651)
+...|.|.|.| .+|++|. ++.+.+.+.. +|. +.++...+.+++.||.+.+.++.+++ ++. ..
T Consensus 20 A~~tI~~tV~da~tG~~vt~~a~vti~~~~-------~~~----~A~~a~~vtas~~~y~~~~~tV~vpal~~Gq~a~~~ 88 (104)
T PF12985_consen 20 AKYTIAGTVYDAETGEDVTTTATVTISAGS-------DGT----LAAKAVTVTASKDGYMTGSVTVNVPALKAGQFAVYP 88 (104)
T ss_dssp -EEEEEEEEEETTTTEE-CGCSEEEETTCC-------CCC----E--ECCEEEEEECTCEEEEEEEEE--B-TT-EEEEE
T ss_pred CEEEEEEEEEecCCCCeeeccceEEEccCC-------Ccc----cccccEEEEEEccCCeeeEEEEEehhhcCCceEEEe
Confidence 34579999999 7999998 8888886543 444 45666788999999999999988863 322 35
Q ss_pred EEEEEeeee
Q psy8322 579 VGAVLESLL 587 (651)
Q Consensus 579 ~~~~L~~~~ 587 (651)
.+|.|.+..
T Consensus 89 v~i~L~~~~ 97 (104)
T PF12985_consen 89 VNIALQKEA 97 (104)
T ss_dssp EEEEE-CTC
T ss_pred eEEEEeecc
Confidence 677776543
No 169
>PF09430 DUF2012: Protein of unknown function (DUF2012); InterPro: IPR019008 This domain is found in different proteins, including uncharacterised protein family UPF0480 and nodal modulators. A nodal modulator has been identified as part of a protein complex that participates in the nodal signaling pathway during vertebrate development [].
Probab=92.37 E-value=0.28 Score=44.45 Aligned_cols=51 Identities=18% Similarity=0.369 Sum_probs=41.1
Q ss_pred ccceEEEEeeeee---eeeeCCCeeE-EeeccCceEEEEEEEeeeeeEEEEEEee
Q psy8322 522 LANVSISLAYKNV---SFMSSQRGEY-WRVLMPGIYFIEASKEGYELFRDRIKIP 572 (651)
Q Consensus 522 i~~A~V~i~~~~~---~~~Td~~G~f-~~~l~~g~y~l~vs~~Gy~~~~~~v~v~ 572 (651)
.+...|.|.+... .+....||.| +.++++|.|.|.|.+..|.=....|.|.
T Consensus 7 ~~~t~V~L~~g~~~~~~~~v~~dG~F~f~~Vp~GsY~L~V~s~~~~F~~~RVdV~ 61 (123)
T PF09430_consen 7 PSSTRVTLNGGQYRPISAFVRSDGSFVFHNVPPGSYLLEVHSPDYVFPPYRVDVS 61 (123)
T ss_pred CCCEEEEEeCCCccceEEEecCCCEEEeCCCCCceEEEEEECCCccccCEEEEEe
Confidence 4567888876555 7788999999 7889999999999999886655666665
No 170
>PF12866 DUF3823: Protein of unknown function (DUF3823); InterPro: IPR024278 This is a family of uncharacterised proteins from Bacteroidetes. These proteins have characteristic DN and DR sequence-motifs but their function is not known.; PDB: 3HN5_B 4EIU_A.
Probab=92.06 E-value=0.59 Score=46.80 Aligned_cols=77 Identities=18% Similarity=0.178 Sum_probs=53.0
Q ss_pred ccceeEEEEc-CCCCccc----ceEEEEeee------eeeeeeCCCeeE-EeeccCceEEEEE-EEee---eeeEEEEEE
Q psy8322 507 HRGVKGLVLD-ETGSRLA----NVSISLAYK------NVSFMSSQRGEY-WRVLMPGIYFIEA-SKEG---YELFRDRIK 570 (651)
Q Consensus 507 ~~~i~G~V~D-~~g~pi~----~A~V~i~~~------~~~~~Td~~G~f-~~~l~~g~y~l~v-s~~G---y~~~~~~v~ 570 (651)
..+++|+|.| .+|+||. ++.|.+... ........||.| ...|=.|.|+|.+ .-.| +...++.+.
T Consensus 21 ~s~l~G~iiD~~tgE~i~~~~~gv~i~l~e~gy~~~~~~~~~v~qDGtf~n~~lF~G~Yki~~~~G~fp~~~~~dti~v~ 100 (222)
T PF12866_consen 21 DSTLTGRIIDVYTGEPIQTDIGGVRIQLYELGYGDNTPQDVYVKQDGTFRNTKLFDGDYKIVPKNGNFPWVVPVDTIEVD 100 (222)
T ss_dssp -EEEEEEEEECCTTEE----STSSEEEEECS-CCG--SEEEEB-TTSEEEEEEE-SEEEEEEE-CTSCSBSCCE--EEEE
T ss_pred CceEEEEEEEeecCCeeeecCCceEEEEEecccccCCCcceEEccCCceeeeeEeccceEEEEcCCCCcccCCCccEEEE
Confidence 3579999999 8898775 567777542 235567899999 7788999999999 7777 777888888
Q ss_pred eeCCCceEEEEEEee
Q psy8322 571 IPESTSPVVGAVLES 585 (651)
Q Consensus 571 v~~~~~~~~~~~L~~ 585 (651)
+... +.++|..+|
T Consensus 101 i~G~--t~~d~eVtP 113 (222)
T PF12866_consen 101 IKGN--TTQDFEVTP 113 (222)
T ss_dssp ESSC--EEEEEEE-B
T ss_pred ecCc--eEEeEEeee
Confidence 8632 456776664
No 171
>PF10670 DUF4198: Domain of unknown function (DUF4198)
Probab=91.07 E-value=0.59 Score=46.20 Aligned_cols=51 Identities=22% Similarity=0.319 Sum_probs=42.0
Q ss_pred ceeEEEEcCCCCcccceEEEEeee---------eeeeeeCCCeeE-EeeccCceEEEEEEEe
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYK---------NVSFMSSQRGEY-WRVLMPGIYFIEASKE 560 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~---------~~~~~Td~~G~f-~~~l~~g~y~l~vs~~ 560 (651)
.+..+|. -+|+|+++|.|.+... .....||.+|.+ +....+|.|.|.+++.
T Consensus 152 ~~~~~vl-~~GkPl~~a~V~~~~~~~~~~~~~~~~~~~TD~~G~~~~~~~~~G~wli~a~~~ 212 (215)
T PF10670_consen 152 PLPFQVL-FDGKPLAGAEVEAFSPGGWYDVEHEAKTLKTDANGRATFTLPRPGLWLIRASHK 212 (215)
T ss_pred EEEEEEE-ECCeEcccEEEEEEECCCccccccceEEEEECCCCEEEEecCCCEEEEEEEEEe
Confidence 3778887 7899999999999754 446889999999 5567899999998764
No 172
>PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [].
Probab=89.72 E-value=0.99 Score=39.04 Aligned_cols=50 Identities=20% Similarity=0.123 Sum_probs=35.3
Q ss_pred ceeEEEEc-CCCCcccceEEEEee-ee----eeeeeCCCeeEEeeccCceEEEEEE
Q psy8322 509 GVKGLVLD-ETGSRLANVSISLAY-KN----VSFMSSQRGEYWRVLMPGIYFIEAS 558 (651)
Q Consensus 509 ~i~G~V~D-~~g~pi~~A~V~i~~-~~----~~~~Td~~G~f~~~l~~g~y~l~vs 558 (651)
++.-.|++ .+|+||++|.|.+.+ .+ ...+||.+|...+......+.+.++
T Consensus 14 ~~~v~v~~L~tg~Pv~ga~V~l~~~~~~~~l~~g~TD~~G~a~~~~~~~~~~viA~ 69 (97)
T PF11974_consen 14 GLLVWVTSLSTGKPVAGAEVELYDSRNGQVLASGKTDADGFASFDSTKKPFLVIAR 69 (97)
T ss_pred CEEEEEeeCCCCCccCCCEEEEEECCCCcEeeeeeeCCCceEEecCCCCCEEEEEE
Confidence 35567889 899999999999987 33 2567999999855443333444443
No 173
>COG5266 CbiK ABC-type Co2+ transport system, periplasmic component [Inorganic ion transport and metabolism]
Probab=89.47 E-value=1 Score=45.31 Aligned_cols=52 Identities=19% Similarity=0.383 Sum_probs=40.8
Q ss_pred ceeEEEEcCCCCcccceEEEEe-------e----e------eeeeeeCCCeeE-EeeccCceEEEEEEEee
Q psy8322 509 GVKGLVLDETGSRLANVSISLA-------Y----K------NVSFMSSQRGEY-WRVLMPGIYFIEASKEG 561 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~-------~----~------~~~~~Td~~G~f-~~~l~~g~y~l~vs~~G 561 (651)
-++|+|.|. |+||++|+|.+. + + .....||.+|.| +..+..|...+.+-..+
T Consensus 173 ~f~~~vl~~-GkPv~nA~V~v~~~n~~~~d~~a~~~~~ek~~~~~~TD~kG~~~fip~r~G~W~~~~~~~~ 242 (264)
T COG5266 173 VFRGKVLDN-GKPVPNATVEVEFDNIDTKDNRAKTGNTEKTALVQFTDDKGEVSFIPLRAGVWGFAVEHKT 242 (264)
T ss_pred eEEEEEEEC-CccCCCcEEEEEEecccccccccccCCCCCcceEEEcCCCceEEEEEccCceEEEEeeccC
Confidence 489999999 999999999998 1 0 124579999999 77788888877664443
No 174
>TIGR02962 hdxy_isourate hydroxyisourate hydrolase. Members of this family, hydroxyisourate hydrolase, represent a distinct clade of transthyretin-related proteins. Bacterial members typically are encoded next to ureidoglycolate hydrolase and often near either xanthine dehydrogenase or xanthine/uracil permease genes and have been demonstrated to have hydroxyisourate hydrolase activity. In eukaryotes, a clade separate from the transthyretins (a family of thyroid-hormone binding proteins) has also been shown to have HIU hydrolase activity in urate catabolizing organisms. Transthyretin, then, would appear to be the recently diverged paralog of the more ancient HIUH family.
Probab=88.47 E-value=0.89 Score=40.40 Aligned_cols=55 Identities=24% Similarity=0.311 Sum_probs=43.5
Q ss_pred eeEEEEc-CCCCcccceEEEEeeee-------eeeeeCCCeeEE------eeccCceEEEEEEEeeeee
Q psy8322 510 VKGLVLD-ETGSRLANVSISLAYKN-------VSFMSSQRGEYW------RVLMPGIYFIEASKEGYEL 564 (651)
Q Consensus 510 i~G~V~D-~~g~pi~~A~V~i~~~~-------~~~~Td~~G~f~------~~l~~g~y~l~vs~~Gy~~ 564 (651)
|+=.|.| ..|.|.+|+.|.+.... ...+||.||+.. ..+++|.|+|++..-.|-.
T Consensus 3 lstHVLDt~~G~PAagv~V~L~~~~~~~~~~i~~~~Tn~DGR~~~~l~~~~~~~~G~Y~l~F~~g~Yf~ 71 (112)
T TIGR02962 3 LSTHVLDTTSGKPAAGVPVTLYRLDGSGWTPLAEGVTNADGRCPDLLPEGETLAAGIYKLRFDTGDYFA 71 (112)
T ss_pred ceEEEEeCCCCccCCCCEEEEEEecCCCeEEEEEEEECCCCCCcCcccCcccCCCeeEEEEEEhhhhhh
Confidence 6677999 88999999999997532 146799999982 1357899999998888854
No 175
>PF06488 L_lac_phage_MSP: Lactococcus lactis bacteriophage major structural protein; InterPro: IPR010517 This family consists of several Lactococcus lactis bacteriophage F4-1 major structural proteins []. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=84.75 E-value=1.6 Score=42.18 Aligned_cols=37 Identities=19% Similarity=0.352 Sum_probs=29.0
Q ss_pred eeeCCCeeEE--eeccCceEEEEEEEeeeeeEEEEEEee
Q psy8322 536 FMSSQRGEYW--RVLMPGIYFIEASKEGYELFRDRIKIP 572 (651)
Q Consensus 536 ~~Td~~G~f~--~~l~~g~y~l~vs~~Gy~~~~~~v~v~ 572 (651)
.+||..|.-. -.|.+|.|++++|+.||...++.+.|+
T Consensus 260 VITnssG~~vTNgqLsaGtYtVTySAsGY~DVTqtlvVT 298 (301)
T PF06488_consen 260 VITNSSGNVVTNGQLSAGTYTVTYSASGYADVTQTLVVT 298 (301)
T ss_pred EEEcCCCcEeecCcccCceEEEEEeccccccccceEEEe
Confidence 4566666652 248999999999999999888877664
No 176
>PF09892 DUF2119: Uncharacterized protein conserved in archaea (DUF2119); InterPro: IPR019218 This entry represents a family of hypothetical archaeal proteins of unknown function.
Probab=84.25 E-value=1.7 Score=41.83 Aligned_cols=48 Identities=27% Similarity=0.453 Sum_probs=32.8
Q ss_pred CeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeee
Q psy8322 316 PNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAV 377 (651)
Q Consensus 316 p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~ 377 (651)
|.=+|+||+||+||-.+.-++.-+. ...+.+-.+.|+| +..+|.-++.
T Consensus 7 p~rLFvgGlHG~Egk~t~~iL~~l~-------------~~~~~~G~l~i~p-lv~~~kYiST 54 (193)
T PF09892_consen 7 PKRLFVGGLHGDEGKDTSPILKRLK-------------PNDFNNGNLIIIP-LVENSKYIST 54 (193)
T ss_pred ceEEEEeeccCcchhhHHHHHHHhC-------------cccccCceEEEEe-CCCCCCceee
Confidence 8899999999999987765543332 1234457899999 4445544443
No 177
>PF00576 Transthyretin: HIUase/Transthyretin family; InterPro: IPR023416 This family includes transthyretin that is a thyroid hormone-binding protein that transports thyroxine from the bloodstream to the brain. However, most of the sequences listed in this family do not bind thyroid hormones. They are actually enzymes of the purine catabolism that catalyse the conversion of 5-hydroxyisourate (HIU) to OHCU [, ]. HIU hydrolysis is the original function of the family and is conserved from bacteria to mammals; transthyretins arose by gene duplications in the vertebrate lineage [, ]. HIUases are distinguished in the alignment from the conserved C-terminal YRGS sequence. Transthyretin (formerly prealbumin) is one of 3 thyroid hormone-binding proteins found in the blood of vertebrates []. It is produced in the liver and circulates in the bloodstream, where it binds retinol and thyroxine (T4) []. It differs from the other 2 hormone-binding proteins (T4-binding globulin and albumin) in 3 distinct ways: (1) the gene is expressed at a high rate in the brain choroid plexus; (2) it is enriched in cerebrospinal fluid; and (3) no genetically caused absence has been observed, suggesting an essential role in brain function, distinct from that played in the bloodstream []. The protein consists of around 130 amino acids, which assemble as a homotetramer that contains an internal channel in which T4 is bound. Within this complex, T4 appears to be transported across the blood-brain barrier, where, in the choroid plexus, the hormone stimulates further synthesis of transthyretin. The protein then diffuses back into the bloodstream, where it binds T4 for transport back to the brain [].; PDB: 1TFP_B 1KGJ_D 1IE4_C 1GKE_C 1KGI_D 2H0J_B 2H0E_B 2H0F_B 1ZD6_A 3DGD_D ....
Probab=83.09 E-value=1.4 Score=39.21 Aligned_cols=53 Identities=28% Similarity=0.365 Sum_probs=39.9
Q ss_pred eeEEEEc-CCCCcccceEEEEeeee--------eeeeeCCCeeE--Ee----eccCceEEEEEEEeee
Q psy8322 510 VKGLVLD-ETGSRLANVSISLAYKN--------VSFMSSQRGEY--WR----VLMPGIYFIEASKEGY 562 (651)
Q Consensus 510 i~G~V~D-~~g~pi~~A~V~i~~~~--------~~~~Td~~G~f--~~----~l~~g~y~l~vs~~Gy 562 (651)
|+=-|.| ..|.|..++.|.+.... ...+||.||+. .. .+.+|.|+|++.--.|
T Consensus 3 iStHVLDt~~G~PA~gv~V~L~~~~~~~~~~~l~~~~Td~DGR~~~~~~~~~~~~~G~Y~l~F~~~~Y 70 (112)
T PF00576_consen 3 ISTHVLDTTTGKPAAGVPVTLYRLDSDGSWTLLAEGVTDADGRIKQPLLEGESLEPGIYKLVFDTGDY 70 (112)
T ss_dssp EEEEEEETTTTEE-TT-EEEEEEEETTSCEEEEEEEEBETTSEESSTSSETTTS-SEEEEEEEEHHHH
T ss_pred cEEEEeeCCCCCCccCCEEEEEEecCCCCcEEEEEEEECCCCcccccccccccccceEEEEEEEHHHh
Confidence 6667999 78999999999997654 36789999998 11 3778999999876666
No 178
>KOG1948|consensus
Probab=83.06 E-value=2.1 Score=49.74 Aligned_cols=58 Identities=31% Similarity=0.513 Sum_probs=48.4
Q ss_pred ceeEEEEcCCCCcccceEEEEeee---eeeeeeCCCeeE-EeeccCceEEEEEEEeeeeeEE
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYK---NVSFMSSQRGEY-WRVLMPGIYFIEASKEGYELFR 566 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~---~~~~~Td~~G~f-~~~l~~g~y~l~vs~~Gy~~~~ 566 (651)
+|+|+|.-+-|...+++.|.+... -..+.|+.+|.| ++++.||+|.|.+++.-.+-..
T Consensus 120 sv~GkVlgaaggGpagV~velrs~e~~iast~T~~~Gky~f~~iiPG~Yev~ashp~w~~~~ 181 (1165)
T KOG1948|consen 120 SVRGKVLGAAGGGPAGVLVELRSQEDPIASTKTEDGGKYEFRNIIPGKYEVSASHPAWECIS 181 (1165)
T ss_pred eEeeEEeeccCCCcccceeecccccCcceeeEecCCCeEEEEecCCCceEEeccCcceeEee
Confidence 599999987666668888888665 357889999999 8889999999999998876544
No 179
>PF10794 DUF2606: Protein of unknown function (DUF2606); InterPro: IPR019730 This entry represents bacterial proteins with unknown function.
Probab=79.93 E-value=14 Score=32.67 Aligned_cols=53 Identities=17% Similarity=0.270 Sum_probs=41.8
Q ss_pred eeEEEEcCCCCcccceEEEEee---------eee---eeeeCCCeeE-EeeccCceEEEEEEEeee
Q psy8322 510 VKGLVLDETGSRLANVSISLAY---------KNV---SFMSSQRGEY-WRVLMPGIYFIEASKEGY 562 (651)
Q Consensus 510 i~G~V~D~~g~pi~~A~V~i~~---------~~~---~~~Td~~G~f-~~~l~~g~y~l~vs~~Gy 562 (651)
|+=-|.|+.|.|+.+++|.+-. ... -..||+.|.+ |.....|+|.|.+..-+-
T Consensus 44 VT~hVen~e~~pi~~~ev~lmKa~ds~~qPs~eig~~IGKTD~~Gki~Wk~~~kG~Y~v~l~n~e~ 109 (131)
T PF10794_consen 44 VTFHVENAEGQPIKDFEVTLMKAADSDPQPSKEIGISIGKTDEEGKIIWKNGRKGKYIVFLPNGET 109 (131)
T ss_pred EEEEEecCCCCcccceEEEEEeccccCCCCchhhceeecccCCCCcEEEecCCcceEEEEEcCCCc
Confidence 6667889999999999999854 112 2369999999 999999999887755543
No 180
>cd03457 intradiol_dioxygenase_like Intradiol dioxygenase supgroup. Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates. They break the catechol C1-C2 bond and utilize Fe3+, as opposed to the extradiol-cleaving enzymes which break the C2-C3 or C1-C6 bond and utilize Fe2+ and Mn+. The family contains catechol 1,2-dioxygenases and protocatechuate 3,4-dioxygenases. The specific function of this subgroup is unknown.
Probab=79.57 E-value=4.9 Score=39.20 Aligned_cols=46 Identities=17% Similarity=0.213 Sum_probs=33.1
Q ss_pred ceeEEEEc-CCCCcccceEEEEeeee------------------------e-eeeeCCCeeE-EeeccCceEE
Q psy8322 509 GVKGLVLD-ETGSRLANVSISLAYKN------------------------V-SFMSSQRGEY-WRVLMPGIYF 554 (651)
Q Consensus 509 ~i~G~V~D-~~g~pi~~A~V~i~~~~------------------------~-~~~Td~~G~f-~~~l~~g~y~ 554 (651)
.|.|+|+| .+++||++|.|.|=-.+ . ...||++|.| +..+.||-|.
T Consensus 28 ~l~g~V~D~~~c~Pv~~a~VdiWh~da~G~Ys~~~~~~~~~~~~~~~~flRG~~~TD~~G~~~F~TI~PG~Y~ 100 (188)
T cd03457 28 TLDLQVVDVATCCPPPNAAVDIWHCDATGVYSGYSAGGGGGEDTDDETFLRGVQPTDADGVVTFTTIFPGWYP 100 (188)
T ss_pred EEEEEEEeCCCCccCCCeEEEEecCCCCCCCCCccCCccccccccCCCcCEEEEEECCCccEEEEEECCCCCC
Confidence 37888888 56888888888873100 1 3468999998 7778888774
No 181
>COG1470 Predicted membrane protein [Function unknown]
Probab=77.77 E-value=9.8 Score=41.72 Aligned_cols=74 Identities=22% Similarity=0.362 Sum_probs=58.6
Q ss_pred eeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEee-eeeEEEEEEeeCCCceEEEEEEee
Q psy8322 510 VKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEG-YELFRDRIKIPESTSPVVGAVLES 585 (651)
Q Consensus 510 i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~G-y~~~~~~v~v~~~~~~~~~~~L~~ 585 (651)
..-.+.|.+|++++.|-|... +...-|+.+|+-...+.||.|.+.+...| |+.....+.++.+.+..+.+.+.+
T Consensus 189 ~~l~~vd~~G~gv~~~~v~~g--~e~~ets~~g~~~~e~t~g~y~~~i~~~g~ye~~~~av~l~d~~t~dLkls~~~ 263 (513)
T COG1470 189 SKLRLVDDDGAGVPKALVKDG--NESFETSSKGNLEVEITPGKYVVLIAKKGIYEKKKRAVKLNDGETKDLKLSVTE 263 (513)
T ss_pred EEEEEEccCCCccchheeecC--ceeEEeecccceeEEecCcceEEEeccccceecceEEEEcCCCcccceeEEEEe
Confidence 566788999999998888763 34667888998888899999999999999 777777888877766555555543
No 182
>cd05822 TLP_HIUase HIUase (5-hydroxyisourate hydrolase) catalyzes the second step in a three-step ureide pathway in which 5-hydroxyisourate (HIU), a product of the uricase (urate oxidase) reaction, is hydrolyzed to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU). HIUase has high sequence similarity with transthyretins and is a member of the transthyretin-like protein (TLP) family. HIUase is distinguished from transthyretins by a conserved signature motif at its C-terminus that forms part of the active site. In HIUase, this motif is YRGS, while transthyretins have a conserved TAVV sequence in the same location. Most HIUases are cytosolic but in plants and slime molds, they are peroxisomal based on the presence of N-terminal periplasmic localization sequences. HIUase forms a homotetramer with each subunit consisting of eight beta-strands arranged in two sheets and a short alpha-helix. The central channel of the tetramer contains two independent binding sites, each located betw
Probab=75.82 E-value=5.4 Score=35.44 Aligned_cols=55 Identities=24% Similarity=0.283 Sum_probs=43.3
Q ss_pred eeEEEEc-CCCCcccceEEEEeeee-------eeeeeCCCeeE-E--e---eccCceEEEEEEEeeeee
Q psy8322 510 VKGLVLD-ETGSRLANVSISLAYKN-------VSFMSSQRGEY-W--R---VLMPGIYFIEASKEGYEL 564 (651)
Q Consensus 510 i~G~V~D-~~g~pi~~A~V~i~~~~-------~~~~Td~~G~f-~--~---~l~~g~y~l~vs~~Gy~~ 564 (651)
|+=-|.| ..|.|-+|+.|.+.... ...+||.||+. . . .+.+|.|+|++..-.|-.
T Consensus 3 lstHVLDt~~G~PAagv~V~L~~~~~~~~~~i~~~~Td~DGR~~~~~~~~~~~~~G~Y~l~F~~~~Yf~ 71 (112)
T cd05822 3 LSTHVLDTATGKPAAGVAVTLYRLDGNGWTLLATGVTNADGRCDDLLPPGAQLAAGTYKLTFDTGAYFA 71 (112)
T ss_pred ceeEEEeCCCCcccCCCEEEEEEecCCCeEEEEEEEECCCCCccCcccccccCCCeeEEEEEEhhhhhh
Confidence 5667999 78999999999997532 24689999998 2 1 367899999998888854
No 183
>cd05469 Transthyretin_like Transthyretin_like. This domain is present in the transthyretin-like protein (TLP) family which includes transthyretin (TTR) and a transthyretin-related protein called 5-hydroxyisourate hydrolase (HIUase). TTR and HIUase are homotetrameric proteins with each subunit consisting of eight beta-strands arranged in two sheets and a short alpha-helix. The central channel of the tetramer contains two independent binding sites, each located between a pair of subunits. TTR transports thyroid hormones and retinol in the blood serum of vertebrates while HIUase catalyzes the second step in a three-step ureide pathway. TTRs are highly conserved and found only in vertebrates while the HIUases are found in a wide range of bacterial, plant, fungal, slime mold and vertebrate organisms.
Probab=73.94 E-value=7.3 Score=34.64 Aligned_cols=55 Identities=29% Similarity=0.338 Sum_probs=42.4
Q ss_pred eeEEEEc-CCCCcccceEEEEeeee--------eeeeeCCCeeEEe-----eccCceEEEEEEEeeeee
Q psy8322 510 VKGLVLD-ETGSRLANVSISLAYKN--------VSFMSSQRGEYWR-----VLMPGIYFIEASKEGYEL 564 (651)
Q Consensus 510 i~G~V~D-~~g~pi~~A~V~i~~~~--------~~~~Td~~G~f~~-----~l~~g~y~l~vs~~Gy~~ 564 (651)
|+=-|.| ..|.|-+|+.|.+.... ...+||.||+... .+.+|.|+|++.--.|-.
T Consensus 3 lStHVLDt~~G~PAagv~V~L~~~~~~~~w~~l~~~~Tn~DGR~~~~l~~~~~~~G~Y~l~F~t~~Yf~ 71 (113)
T cd05469 3 LMVKVLDAVRGSPAANVAIKVFRKTADGSWEIFATGKTNEDGELHGLITEEEFXAGVYRVEFDTKSYWK 71 (113)
T ss_pred ceEEEEeCCCCccCCCCEEEEEEecCCCceEEEEEEEECCCCCccCccccccccceEEEEEEehHHhHh
Confidence 5667999 78999999999996522 2467999999821 356799999998777743
No 184
>smart00095 TR_THY Transthyretin.
Probab=73.77 E-value=7.1 Score=35.13 Aligned_cols=55 Identities=27% Similarity=0.318 Sum_probs=42.6
Q ss_pred eeEEEEc-CCCCcccceEEEEeeee--------eeeeeCCCeeE-E-e---eccCceEEEEEEEeeeee
Q psy8322 510 VKGLVLD-ETGSRLANVSISLAYKN--------VSFMSSQRGEY-W-R---VLMPGIYFIEASKEGYEL 564 (651)
Q Consensus 510 i~G~V~D-~~g~pi~~A~V~i~~~~--------~~~~Td~~G~f-~-~---~l~~g~y~l~vs~~Gy~~ 564 (651)
|+=-|.| ..|.|-.|+.|.+.... ....||.||+. . . .+.+|.|+|++.--.|-.
T Consensus 6 lTtHVLDt~~G~PAagv~V~L~~~~~~~~w~~la~~~Tn~DGR~~~ll~~~~~~~G~Y~l~F~tg~Yf~ 74 (121)
T smart00095 6 LMVKVLDAVRGSPAVNVAVKVFKKTEEGTWEPFASGKTNESGEIHELTTDEKFVEGLYKVEFDTKSYWK 74 (121)
T ss_pred eEEEEEECCCCccCCCCEEEEEEeCCCCceEEEEEEecCCCccccCccCcccccceEEEEEEehhHhHh
Confidence 6778999 88999999999995432 24689999998 2 2 356899999997766643
No 185
>cd05821 TLP_Transthyretin Transthyretin (TTR) is a 55 kDa protein responsible for the transport of thyroid hormones and retinol in vertebrates. TTR distributes the two thyroid hormones T3 (3,5,3'-triiodo-L-thyronine) and T4 (Thyroxin, or 3,5,3',5'-tetraiodo-L-thyronine), as well as retinol (vitamin A) through the formation of a macromolecular complex that includes each of these as well as retinol-binding protein. Misfolded forms of TTR are implicated in the amyloid diseases familial amyloidotic polyneuropathy and senile systemic amyloidosis. TTR forms a homotetramer with each subunit consisting of eight beta-strands arranged in two sheets and a short alpha-helix. The central channel of the tetramer contains two independent binding sites, each located between a pair of subunits, which differ in their ligand binding affinity. A negative cooperativity has been observed for the binding of T4 and other TTR ligands. A fraction of plasma TTR is carried in high density lipoproteins by bindi
Probab=72.27 E-value=7.8 Score=34.89 Aligned_cols=55 Identities=29% Similarity=0.347 Sum_probs=43.2
Q ss_pred eeEEEEc-CCCCcccceEEEEeeee--------eeeeeCCCeeEE--e---eccCceEEEEEEEeeeee
Q psy8322 510 VKGLVLD-ETGSRLANVSISLAYKN--------VSFMSSQRGEYW--R---VLMPGIYFIEASKEGYEL 564 (651)
Q Consensus 510 i~G~V~D-~~g~pi~~A~V~i~~~~--------~~~~Td~~G~f~--~---~l~~g~y~l~vs~~Gy~~ 564 (651)
|+=-|.| ..|.|-.|+.|.+.... ...+||.||+.- . .+.+|.|.|++.--.|-.
T Consensus 9 ittHVLDt~~G~PAaGV~V~L~~~~~~~~w~~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~l~F~tg~Yf~ 77 (121)
T cd05821 9 LMVKVLDAVRGSPAANVAVKVFKKTADGSWEPFASGKTTETGEIHGLTTDEQFTEGVYKVEFDTKAYWK 77 (121)
T ss_pred cEEEEEECCCCccCCCCEEEEEEecCCCceEEEEEEEECCCCCCCCccCccccCCeeEEEEEehhHhhh
Confidence 6778999 88999999999995422 246899999982 1 256899999998877754
No 186
>PF14347 DUF4399: Domain of unknown function (DUF4399)
Probab=71.41 E-value=11 Score=31.96 Aligned_cols=53 Identities=25% Similarity=0.334 Sum_probs=38.0
Q ss_pred cceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeE--EeeccCceEEEEEEEeeee
Q psy8322 508 RGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEY--WRVLMPGIYFIEASKEGYE 563 (651)
Q Consensus 508 ~~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f--~~~l~~g~y~l~vs~~Gy~ 563 (651)
.+-.=.+.|..+.|.++..|.....-... .+|.= .+.|+||+|+|++.+-.+.
T Consensus 20 tgh~hlliD~~~~~~~~~~I~~~~n~vhy---~~Gqte~~I~L~PG~htLtl~~~d~~ 74 (87)
T PF14347_consen 20 TGHHHLLIDGDGPPLANEPIPFNINGVHY---GKGQTELNIELPPGKHTLTLQLGDGD 74 (87)
T ss_pred CccEEEEECCCCCcCCCCeeeecCCeEEe---CCCEEEEEEEeCCCCEEEEEEeCCCC
Confidence 34566788988889999988875322222 55554 5679999999999886664
No 187
>COG2988 Succinylglutamate desuccinylase [Amino acid transport and metabolism]
Probab=70.67 E-value=3.6 Score=42.20 Aligned_cols=31 Identities=23% Similarity=0.379 Sum_probs=28.3
Q ss_pred eEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322 317 NVKIVGNIHGDEPIGREIILRLLEYLVVEYI 347 (651)
Q Consensus 317 ~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~ 347 (651)
.+.+.|||||+|..+.|++-.+++.+..++.
T Consensus 45 ~lvIsaGiHGNEtapvEll~kl~~~~~ag~~ 75 (324)
T COG2988 45 SLVISAGIHGNETAPVELLDKLQQKISAGQL 75 (324)
T ss_pred ceEEEecccCCccCcHHHHHHHHhhhhhccc
Confidence 7999999999999999999999998887763
No 188
>PF01190 Pollen_Ole_e_I: Pollen proteins Ole e I like; InterPro: IPR006041 Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Ole e 1. A number of plant pollen proteins, whose biological function is not yet known, are structurally related []. These proteins are most probably secreted and consist of about 145 residues. There are six cysteines which are conserved in the sequence of these proteins. They seem to be involved in disulphide bonds.
Probab=70.42 E-value=8.6 Score=32.99 Aligned_cols=33 Identities=15% Similarity=0.211 Sum_probs=25.6
Q ss_pred CCcccceEEEEeeee--------eeeeeCCCeeEEeeccCc
Q psy8322 519 GSRLANVSISLAYKN--------VSFMSSQRGEYWRVLMPG 551 (651)
Q Consensus 519 g~pi~~A~V~i~~~~--------~~~~Td~~G~f~~~l~~g 551 (651)
..||+||+|.|.-.. ....||++|.|...++..
T Consensus 18 ~~~l~GA~V~v~C~~~~~~~~~~~~~~Td~~G~F~i~l~~~ 58 (97)
T PF01190_consen 18 AKPLPGAKVSVECKDGNGGVVFSAEAKTDENGYFSIELPSD 58 (97)
T ss_pred CccCCCCEEEEECCCCCCCcEEEEEEEeCCCCEEEEEecCc
Confidence 569999999998433 356899999997777653
No 189
>COG2351 Transthyretin-like protein [General function prediction only]
Probab=67.82 E-value=15 Score=32.66 Aligned_cols=55 Identities=24% Similarity=0.292 Sum_probs=43.4
Q ss_pred eeEEEEc-CCCCcccceEEEEeeee-------eeeeeCCCeeEE------eeccCceEEEEEEEeeeee
Q psy8322 510 VKGLVLD-ETGSRLANVSISLAYKN-------VSFMSSQRGEYW------RVLMPGIYFIEASKEGYEL 564 (651)
Q Consensus 510 i~G~V~D-~~g~pi~~A~V~i~~~~-------~~~~Td~~G~f~------~~l~~g~y~l~vs~~Gy~~ 564 (651)
++--|.| .+|+|-+++.|.+.... ..+.||.||+-- ..+..|.|.|++..--|-.
T Consensus 11 LTTHVLDta~GkPAagv~V~L~rl~~~~~~~l~t~~Tn~DGR~d~pll~g~~~~~G~Y~l~F~~gdYf~ 79 (124)
T COG2351 11 LTTHVLDTASGKPAAGVKVELYRLEGNQWELLKTVVTNADGRIDAPLLAGETLATGIYELVFHTGDYFK 79 (124)
T ss_pred eeeeeeecccCCcCCCCEEEEEEecCCcceeeeEEEecCCCcccccccCccccccceEEEEEEcchhhh
Confidence 7778999 89999999999986432 367899999962 1367899999998877743
No 190
>COG4073 Uncharacterized protein conserved in archaea [Function unknown]
Probab=66.97 E-value=4 Score=38.31 Aligned_cols=45 Identities=31% Similarity=0.489 Sum_probs=33.0
Q ss_pred EEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeee
Q psy8322 319 KIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAV 377 (651)
Q Consensus 319 ~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~ 377 (651)
+|+||+||+||-.++-++. ++.| ++ .+-++.|+|-+|+.-|.-+.
T Consensus 18 lfV~GlHGdEgk~te~ilr-l~~~-------~~------~ng~l~Vip~v~n~~YISTl 62 (198)
T COG4073 18 LFVGGLHGDEGKATEPILR-LRVL-------PE------ENGVLRVIPKVENGPYISTL 62 (198)
T ss_pred EEEeeccCcccchhhhhhh-hccc-------Cc------cCceEEEEeccCCCCceeec
Confidence 8999999999999988776 3222 11 35688999988876665444
No 191
>PF03785 Peptidase_C25_C: Peptidase family C25, C terminal ig-like domain; InterPro: IPR005536 This domain is found in almost all members of MEROPS peptidase family C25, (clan CD). Peptidase family C25 is a protein family found in the bacteria Porphyromonas gingivalis (Bacteroides gingivalis) a Gram-negative anaerobic bacterial species strongly associated with adult periodontitis. One of its distinguishing characteristics and putative virulence properties is the ability to agglutinate erythrocytes []. It is a highly proteolytic organism which metabolises small peptides and amino acids. Indirect evidence suggests that the proteases produced by this microorganism constitute an important virulence factor []. Protease-encoding genes have been shown to contain multiple copies of repeated nucleotide sequences. These conserved sequences have also been found in haemagglutinin genes [].; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 1CVR_A.
Probab=61.37 E-value=31 Score=28.63 Aligned_cols=48 Identities=13% Similarity=0.151 Sum_probs=29.1
Q ss_pred cceEEEEeee--ee-eeeeCCCeeEEeecc-----CceEEEEEEEeeeeeEEEEEEe
Q psy8322 523 ANVSISLAYK--NV-SFMSSQRGEYWRVLM-----PGIYFIEASKEGYELFRDRIKI 571 (651)
Q Consensus 523 ~~A~V~i~~~--~~-~~~Td~~G~f~~~l~-----~g~y~l~vs~~Gy~~~~~~v~v 571 (651)
+|+.|.|... -. ..+++ +|.+..+++ +|.|+|++...-|.+..++|+|
T Consensus 26 ~gs~ValS~dg~l~G~ai~~-sG~ati~l~~~it~~~~~tlTit~~n~~t~i~~i~V 81 (81)
T PF03785_consen 26 PGSYVALSQDGDLYGKAIVN-SGNATINLTNPITDEGTLTLTITAFNYVTYIKTIQV 81 (81)
T ss_dssp TT-EEEEEETTEEEEEEE-B-TTEEEEE-SS--TT-SEEEEEEE-TTB--EEEEEEE
T ss_pred CCcEEEEecCCEEEEEEEec-CceEEEECCcccCCCceEEEEEEEEccEEEEEEeeC
Confidence 5566666532 23 34667 999966665 5789999999999888777654
No 192
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=60.43 E-value=3.6 Score=28.64 Aligned_cols=30 Identities=20% Similarity=0.250 Sum_probs=21.9
Q ss_pred hhcccceeEEEEeccCcCCceeeecccccC
Q psy8322 354 RFLLDNTRIHLLPNLNPDGSELAVEGNCRS 383 (651)
Q Consensus 354 ~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~ 383 (651)
+++.+.-....-|.+.|||..+++.+++..
T Consensus 2 ~~~t~~~~~~~~p~~SpDGk~i~f~s~~~~ 31 (39)
T PF07676_consen 2 KQLTNSPGDDGSPAWSPDGKYIYFTSNRND 31 (39)
T ss_dssp EEES-SSSSEEEEEE-TTSSEEEEEEECT-
T ss_pred cCcccCCccccCEEEecCCCEEEEEecCCC
Confidence 345566667889999999999999887764
No 193
>PF11008 DUF2846: Protein of unknown function (DUF2846); InterPro: IPR022548 Some members in this group of proteins with unknown function are annotated as lipoproteins. However this cannot be confirmed.
Probab=58.65 E-value=47 Score=29.49 Aligned_cols=53 Identities=13% Similarity=0.115 Sum_probs=33.5
Q ss_pred ccceEEEEeeeeeeeeeCCCeeE-EeeccCceEEEEEEEeeee---eEEEEEEeeCCCc
Q psy8322 522 LANVSISLAYKNVSFMSSQRGEY-WRVLMPGIYFIEASKEGYE---LFRDRIKIPESTS 576 (651)
Q Consensus 522 i~~A~V~i~~~~~~~~Td~~G~f-~~~l~~g~y~l~vs~~Gy~---~~~~~v~v~~~~~ 576 (651)
.....|.|.+...+. + ..|.| ...++||+|+|.++..... .....+++..+++
T Consensus 40 ~~~~~v~vdg~~ig~-l-~~g~y~~~~v~pG~h~i~~~~~~~~~~~~~~l~~~~~~G~~ 96 (117)
T PF11008_consen 40 AVKPDVYVDGELIGE-L-KNGGYFYVEVPPGKHTISAKSEFSSSPGANSLDVTVEAGKT 96 (117)
T ss_pred cccceEEECCEEEEE-e-CCCeEEEEEECCCcEEEEEecCccCCCCccEEEEEEcCCCE
Confidence 345677777755554 3 45555 8899999999999655442 2444555554444
No 194
>KOG3006|consensus
Probab=56.36 E-value=42 Score=29.89 Aligned_cols=54 Identities=31% Similarity=0.515 Sum_probs=40.7
Q ss_pred ceeEEEEc-CCCCcccceEEEEeeee-------e-eeeeCCCeeE-Ee----eccCceEEEEEEEeee
Q psy8322 509 GVKGLVLD-ETGSRLANVSISLAYKN-------V-SFMSSQRGEY-WR----VLMPGIYFIEASKEGY 562 (651)
Q Consensus 509 ~i~G~V~D-~~g~pi~~A~V~i~~~~-------~-~~~Td~~G~f-~~----~l~~g~y~l~vs~~Gy 562 (651)
.|+-.|.| ..|.|-.|+.|.+.-.. . ...|+++|+- +. .+.+|.|++.+--.-|
T Consensus 22 ~itahVLd~s~GsPA~gVqV~~f~~~~~~~w~~igs~~T~~nGrv~~~~~~~tl~~GtYr~~~dT~~Y 89 (132)
T KOG3006|consen 22 PITAHVLDISRGSPAAGVQVHLFILANDDTWTPIGSGFTQDNGRVDWVSPDFTLIPGTYRLVFDTEPY 89 (132)
T ss_pred CcEeEEeecccCCcccceEEEEEEecCCCcccCccccccccCceeecccchhhhccceEEEEEecccc
Confidence 38999999 78999999999875321 1 3468999997 33 3789999999854444
No 195
>PF07523 Big_3: Bacterial Ig-like domain (group 3); InterPro: IPR011080 This entry represents bacterial domains with an Ig-like fold. These domains are found in a variety of bacterial surface proteins.; PDB: 2L7Y_A 2KPN_A.
Probab=52.68 E-value=28 Score=27.50 Aligned_cols=48 Identities=13% Similarity=0.106 Sum_probs=26.5
Q ss_pred ceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEE
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRI 569 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v 569 (651)
++.-.+++++|.+++...+.+.+ . ...-.+|.|.|++++.| .+.+..|
T Consensus 18 ~~~v~at~~dG~~~~~~~~~vs~-----------~-~d~~~~G~y~Vt~~y~~-~t~t~~V 65 (67)
T PF07523_consen 18 GLFVTATYSDGTSLPLSDVTVSG-----------T-VDTSKAGTYTVTYTYKG-VTATFTV 65 (67)
T ss_dssp CHEEEEEETTS-ES-GCCSEEES---------------TTS-CCEEEEEEECT-EEEEEEE
T ss_pred CCEEEEEEcCCCEeceeeeEEEe-----------e-eecCCCceEEEEEEECC-EEEEEEE
Confidence 34455677778776544444433 1 22246899999999999 3344343
No 196
>PF10577 UPF0560: Uncharacterised protein family UPF0560; InterPro: IPR018890 This family of proteins has no known function.
Probab=51.55 E-value=29 Score=40.78 Aligned_cols=60 Identities=23% Similarity=0.198 Sum_probs=46.3
Q ss_pred ceeEEEEc-CCCCcccceEEEEeeee---eeeeeCCCeeEEeec--cCce-EEEEEEEeeeeeEEEE
Q psy8322 509 GVKGLVLD-ETGSRLANVSISLAYKN---VSFMSSQRGEYWRVL--MPGI-YFIEASKEGYELFRDR 568 (651)
Q Consensus 509 ~i~G~V~D-~~g~pi~~A~V~i~~~~---~~~~Td~~G~f~~~l--~~g~-y~l~vs~~Gy~~~~~~ 568 (651)
.||-.|.| .+-+||++|.|.|.... ...+|+.+|.-++.+ ..|. -+|++++-||.+....
T Consensus 2 ~lKV~V~d~~t~qpl~~A~V~V~~N~t~~~s~~t~~dG~~~l~~~yrlg~~l~v~a~k~gyv~ns~P 68 (807)
T PF10577_consen 2 TLKVQVSDASTRQPLSDASVEVFGNQTLTASGTTGNDGVVLLKFPYRLGTWLIVTASKDGYVPNSVP 68 (807)
T ss_pred eEEEEEecccCcccCCCCeEEEEeceeEeecceecCCceEEEEEeccCCCeEEEEEecCCccCCCCC
Confidence 37888999 78889999999997643 245789999975544 4455 7889999999876543
No 197
>PF05688 DUF824: Salmonella repeat of unknown function (DUF824); InterPro: IPR008542 This family consists of a series of repeated sequences (of around 180 residues) which are found in Salmonella typhimurium, Salmonella typhi and Escherichia coli. These repeats are almost always found with this entry. The repeats are associated with RatA and RatB, the coding sequences of which are found in the pathogeneicity island of Salmonella. The sequences may be determinants of pathogenicity [, ].
Probab=50.36 E-value=25 Score=26.10 Aligned_cols=22 Identities=23% Similarity=0.339 Sum_probs=19.2
Q ss_pred ceeEEEEcCCCCcccceEEEEe
Q psy8322 509 GVKGLVLDETGSRLANVSISLA 530 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~ 530 (651)
.++-+|+|..|.|+|++.+.|.
T Consensus 16 ~ltVt~kda~G~pv~n~~f~l~ 37 (47)
T PF05688_consen 16 PLTVTVKDANGNPVPNAPFTLT 37 (47)
T ss_pred EEEEEEECCCCCCcCCceEEEE
Confidence 3777889999999999999985
No 198
>PF13953 PapC_C: PapC C-terminal domain; PDB: 3L48_E 2XET_A 3RFZ_E 2KT6_A.
Probab=48.56 E-value=28 Score=27.71 Aligned_cols=37 Identities=24% Similarity=0.121 Sum_probs=19.3
Q ss_pred EEEcCCCCcccc-eEEEEeeeeeeeeeCCCeeE-Eeecc
Q psy8322 513 LVLDETGSRLAN-VSISLAYKNVSFMSSQRGEY-WRVLM 549 (651)
Q Consensus 513 ~V~D~~g~pi~~-A~V~i~~~~~~~~Td~~G~f-~~~l~ 549 (651)
++++++|+|||. |.|...+.....+...+|.- +..++
T Consensus 2 ~l~~~~G~~lPfGA~v~~~~g~~~g~Vg~~G~vyl~~~~ 40 (68)
T PF13953_consen 2 TLRDADGKPLPFGASVSDEDGNNIGIVGQDGQVYLSGLP 40 (68)
T ss_dssp EEEETTSEE--TT-EEEETTSSEEEEB-GCGEEEEEEE-
T ss_pred EEEcCCCCcCCCCcEEEcCCCCEEEEEcCCCEEEEECCC
Confidence 477899998885 45554334444556677775 44443
No 199
>PF13115 YtkA: YtkA-like
Probab=44.60 E-value=80 Score=25.99 Aligned_cols=17 Identities=12% Similarity=0.446 Sum_probs=14.9
Q ss_pred EcCCCCcccceEEEEee
Q psy8322 515 LDETGSRLANVSISLAY 531 (651)
Q Consensus 515 ~D~~g~pi~~A~V~i~~ 531 (651)
.|.+|+||.+|.|.+.-
T Consensus 28 ~~~~g~pv~~a~V~~~~ 44 (86)
T PF13115_consen 28 VDQGGKPVTDADVQFEI 44 (86)
T ss_pred ECCCCCCCCCCEEEEEE
Confidence 67899999999998864
No 200
>TIGR03000 plancto_dom_1 Planctomycetes uncharacterized domain TIGR03000. Domains described by this model are found, so far, only in the Planctomycetes (Pirellula sp. strain 1 and Gemmata obscuriglobus), in up to six proteins per genome, and may be duplicated within a protein. The function is unknown.
Probab=43.12 E-value=81 Score=25.87 Aligned_cols=34 Identities=15% Similarity=0.119 Sum_probs=21.5
Q ss_pred cceEEEEeeeeeeeeeCCCeeE-EeeccCce-EEEEE
Q psy8322 523 ANVSISLAYKNVSFMSSQRGEY-WRVLMPGI-YFIEA 557 (651)
Q Consensus 523 ~~A~V~i~~~~~~~~Td~~G~f-~~~l~~g~-y~l~v 557 (651)
.+|.|++.|.. ...+...-.| ...|++|. |.-++
T Consensus 11 adAkl~v~G~~-t~~~G~~R~F~T~~L~~G~~y~Y~v 46 (75)
T TIGR03000 11 ADAKLKVDGKE-TNGTGTVRTFTTPPLEAGKEYEYTV 46 (75)
T ss_pred CCCEEEECCeE-cccCccEEEEECCCCCCCCEEEEEE
Confidence 67888887642 3334555567 66799996 44333
No 201
>PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 []. The proteins show weak similarity to transthyretin (formerly called prealbumin) which transports thyroid hormones. The specific function of this protein is unknown.; GO: 0005615 extracellular space
Probab=41.18 E-value=37 Score=28.00 Aligned_cols=29 Identities=17% Similarity=0.203 Sum_probs=21.7
Q ss_pred CCCcccceEEEEeeeee--------eeeeCCCeeEEe
Q psy8322 518 TGSRLANVSISLAYKNV--------SFMSSQRGEYWR 546 (651)
Q Consensus 518 ~g~pi~~A~V~i~~~~~--------~~~Td~~G~f~~ 546 (651)
.|+|++++.|.|-+... .+.||.+|.|.+
T Consensus 7 ~~~P~~~~~V~L~e~d~~~~Ddll~~~~Td~~G~F~l 43 (80)
T PF01060_consen 7 GGKPAKNVKVKLWEDDYFDPDDLLDETKTDSDGNFEL 43 (80)
T ss_pred CCccCCCCEEEEEECCCCCCCceeEEEEECCCceEEE
Confidence 36789999988876432 577899999844
No 202
>PF14054 DUF4249: Domain of unknown function (DUF4249)
Probab=39.80 E-value=1.2e+02 Score=31.24 Aligned_cols=54 Identities=17% Similarity=0.399 Sum_probs=35.3
Q ss_pred cccceEEEE-eeeeee-e-ee--CCC-eeEE-e---eccCce-EEEEEEEeeeeeEEEEEEeeCC
Q psy8322 521 RLANVSISL-AYKNVS-F-MS--SQR-GEYW-R---VLMPGI-YFIEASKEGYELFRDRIKIPES 574 (651)
Q Consensus 521 pi~~A~V~i-~~~~~~-~-~T--d~~-G~f~-~---~l~~g~-y~l~vs~~Gy~~~~~~v~v~~~ 574 (651)
++.+|+|.| .+.... . .. +.. |.|. . ...+|. |+|+|...|.+..+-..+++..
T Consensus 59 ~v~~A~V~i~~~~~~~~~~~~~~~~~~g~Y~~~~~~~~~~G~~Y~L~V~~~~~~~~sa~~~vp~~ 123 (298)
T PF14054_consen 59 PVSGATVTIYEDGQGNEYLFEESSNNDGVYYSSNSFRGRPGRTYRLEVETPGGKTYSAETTVPPP 123 (298)
T ss_pred ccCCcEEEEEeCCCcceEeecccCCCcceEEecccccccCCCEEEEEEEECCCCEEEEEEEECCC
Confidence 499999999 443321 1 11 222 7775 2 456675 9999999888877766666543
No 203
>PF07495 Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This region is mostly found at the end of the beta propellers (IPR011110 from INTERPRO) in a family of two component regulators. However they are also found tandemly repeated in Q891H4 from SWISSPROT without other signal conduction domains being present. It is named after the conserved tyrosines found in the alignment. The exact function is not known.; PDB: 3V9F_D 3VA6_B 3OTT_B 4A2M_D 4A2L_B.
Probab=36.46 E-value=47 Score=25.74 Aligned_cols=19 Identities=26% Similarity=0.487 Sum_probs=13.7
Q ss_pred eE-EeeccCceEEEEEEEee
Q psy8322 543 EY-WRVLMPGIYFIEASKEG 561 (651)
Q Consensus 543 ~f-~~~l~~g~y~l~vs~~G 561 (651)
.+ +.+|+||+|+|.|.+..
T Consensus 30 ~~~~~~L~~G~Y~l~V~a~~ 49 (66)
T PF07495_consen 30 SISYTNLPPGKYTLEVRAKD 49 (66)
T ss_dssp EEEEES--SEEEEEEEEEEE
T ss_pred EEEEEeCCCEEEEEEEEEEC
Confidence 55 77899999999997654
No 204
>PF05751 FixH: FixH; InterPro: IPR008620 This family consists of several Rhizobium FixH like proteins. It has been suggested that the four proteins FixG, FixH, FixI, and FixS may participate in a membrane-bound complex coupling the FixI cation pump with a redox process catalysed by FixG [].
Probab=32.27 E-value=1.2e+02 Score=27.70 Aligned_cols=49 Identities=16% Similarity=0.363 Sum_probs=32.7
Q ss_pred ceeEEEEcCCCCcccceEEEEee---------eeeeeeeCCCeeEEe---eccCceEEEEE
Q psy8322 509 GVKGLVLDETGSRLANVSISLAY---------KNVSFMSSQRGEYWR---VLMPGIYFIEA 557 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~---------~~~~~~Td~~G~f~~---~l~~g~y~l~v 557 (651)
.+.-+++|.+|.|+.++.+.+.= .+.......+|.|.. .+.+|.+.|.+
T Consensus 70 ~~~i~~~d~~g~~~~~~~~~l~l~rp~~~~~D~~~~l~~~~~g~y~~~~~~~~~G~W~l~l 130 (146)
T PF05751_consen 70 SLTIRLTDPNGAPVSGAKLTLSLYRPTDAKLDFTLTLTESAPGVYRAPVPLLKKGRWYLRL 130 (146)
T ss_pred eEEEEEEcCCCCcCcCceEEEEEECCCCccCCeeEEeeECCCceEEEEcCCCCCccEEEEE
Confidence 47778889999999999998841 112333466777732 24667777766
No 205
>PF13860 FlgD_ig: FlgD Ig-like domain; PDB: 3C12_A 3OSV_A.
Probab=29.30 E-value=1.5e+02 Score=24.25 Aligned_cols=46 Identities=20% Similarity=0.308 Sum_probs=23.8
Q ss_pred ceeEEEEcCCCCcccceEEEEeeeeeee---e---eCCCeeEEeeccCceEEEEEEE
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYKNVSF---M---SSQRGEYWRVLMPGIYFIEASK 559 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~~~~~---~---Td~~G~f~~~l~~g~y~l~vs~ 559 (651)
.++-.|+|++|+.|. ++.+.....+. . +|.+|. .+++|.|+++|.+
T Consensus 26 ~v~v~I~d~~G~~V~--t~~~~~~~~G~~~~~WdG~d~~G~---~~~~G~Y~~~v~a 77 (81)
T PF13860_consen 26 NVTVTIYDSNGQVVR--TISLGSQSAGEHSFTWDGKDDDGN---PVPDGTYTFRVTA 77 (81)
T ss_dssp EEEEEEEETTS-EEE--EEEEEECSSEEEEEEE-SB-TTS----B--SEEEEEEEEE
T ss_pred EEEEEEEcCCCCEEE--EEEcCCcCCceEEEEECCCCCCcC---CCCCCCEEEEEEE
Confidence 367788888887663 33332221111 1 233443 5789999999875
No 206
>PF01835 A2M_N: MG2 domain; InterPro: IPR002890 The proteinase-binding alpha-macroglobulins (A2M) [] are large glycoproteins found in the plasma of vertebrates, in the hemolymph of some invertebrates and in reptilian and avian egg white. A2M-like proteins are able to inhibit all four classes of proteinases by a 'trapping' mechanism. They have a peptide stretch, called the 'bait region', which contains specific cleavage sites for different proteinases. When a proteinase cleaves the bait region, a conformational change is induced in the protein, thus trapping the proteinase. The entrapped enzyme remains active against low molecular weight substrates, whilst its activity toward larger substrates is greatly reduced, due to steric hindrance. Following cleavage in the bait region, a thiol ester bond, formed between the side chains of a cysteine and a glutamine, is cleaved and mediates the covalent binding of the A2M-like protein to the proteinase. This family includes the N-terminal region of the alpha-2-macroglobulin family. The inhibitor domains belong to MEROPS inhibitor family I39.; GO: 0004866 endopeptidase inhibitor activity; PDB: 2B39_B 3KLS_B 3PRX_C 3KM9_B 3PVM_C 3CU7_A 4E0S_A 4A5W_A 4ACQ_C 2P9R_B ....
Probab=29.05 E-value=3.5e+02 Score=22.70 Aligned_cols=50 Identities=18% Similarity=0.171 Sum_probs=27.9
Q ss_pred eeEEEEcCC--CCcccceEEE--Eeee------eeee-eeCCCeeEE--ee----ccCceEEEEEEE
Q psy8322 510 VKGLVLDET--GSRLANVSIS--LAYK------NVSF-MSSQRGEYW--RV----LMPGIYFIEASK 559 (651)
Q Consensus 510 i~G~V~D~~--g~pi~~A~V~--i~~~------~~~~-~Td~~G~f~--~~----l~~g~y~l~vs~ 559 (651)
+++.+.|.+ ..+..+..|. |.+. .... .++..|.|. .. .+.|.|+|.+..
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~v~i~dp~g~~v~~~~~~~~~~~G~~~~~~~lp~~~~~G~y~i~~~~ 85 (99)
T PF01835_consen 19 FRAIVRDLDNDFKPPANSPVTVTIKDPSGNEVFRWSVNTTNENGIFSGSFQLPDDAPLGTYTIRVKT 85 (99)
T ss_dssp EEEEEEEECTTCSCESSEEEEEEEEETTSEEEEEEEEEETTCTTEEEEEEE--SS---EEEEEEEEE
T ss_pred EEEEEeccccccccccCCceEEEEECCCCCEEEEEEeeeeCCCCEEEEEEECCCCCCCEeEEEEEEE
Confidence 666766744 3344444444 3332 1233 468899882 22 456899999988
No 207
>smart00557 IG_FLMN Filamin-type immunoglobulin domains. These form a rod-like structure in the actin-binding cytoskeleton protein, filamin. The C-terminal repeats of filamin bind beta1-integrin (CD29).
Probab=24.49 E-value=2.1e+02 Score=24.01 Aligned_cols=43 Identities=19% Similarity=0.356 Sum_probs=28.6
Q ss_pred eeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeE---EeeccCceEEEEEEEeee
Q psy8322 510 VKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEY---WRVLMPGIYFIEASKEGY 562 (651)
Q Consensus 510 i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f---~~~l~~g~y~l~vs~~Gy 562 (651)
++-.|++.+|..++ +. ..-+.+|.| +..-.+|.|+|.|.+-|-
T Consensus 34 ~~v~i~~p~g~~~~---~~-------v~d~~dGty~v~y~P~~~G~~~i~V~~~g~ 79 (93)
T smart00557 34 LEVEVTGPSGKKVP---VE-------VKDNGDGTYTVSYTPTEPGDYTVTVKFGGE 79 (93)
T ss_pred EEEEEECCCCCeeE---eE-------EEeCCCCEEEEEEEeCCCEeEEEEEEECCE
Confidence 66677776664332 12 233577888 445677999999998884
No 208
>PRK15310 fimbrial outer membrane usher protein TcfC; Provisional
Probab=24.22 E-value=1.2e+02 Score=36.50 Aligned_cols=41 Identities=17% Similarity=0.033 Sum_probs=32.7
Q ss_pred ceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCce
Q psy8322 509 GVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGI 552 (651)
Q Consensus 509 ~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~ 552 (651)
.+-|.++|+.|.|+.+|.|. + ..++.||++|.|...+....
T Consensus 787 ~yiGr~~~~~G~~l~~a~Il--N-~~~~~td~~GgF~~d~d~~~ 827 (895)
T PRK15310 787 LYVGRVLDKDGRPLLDAQPL--N-YPFLSLGPSGRFSLQSEHKE 827 (895)
T ss_pred EEEEEEECCCCCCcccceee--c-CccceecCCCCEEEEcccCC
Confidence 47799999999999998875 2 24589999999987765543
No 209
>COG3422 Uncharacterized conserved protein [Function unknown]
Probab=23.54 E-value=85 Score=24.34 Aligned_cols=33 Identities=24% Similarity=0.218 Sum_probs=25.4
Q ss_pred eeeeeCCCeeEEeeccCceEEEEEEEeeeeeEE
Q psy8322 534 VSFMSSQRGEYWRVLMPGIYFIEASKEGYELFR 566 (651)
Q Consensus 534 ~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~ 566 (651)
....-|.+|.|...|..++..+.++..||.+..
T Consensus 5 fei~kdk~Ge~rfrlkA~N~eiI~~sEgY~ska 37 (59)
T COG3422 5 FEIYKDKAGEYRFRLKAANGEIILTSEGYKSKA 37 (59)
T ss_pred EEEEEcCCCcEEEEEEccCccEEEeecccchhH
Confidence 345668999996667777778888889997743
No 210
>PF07550 DUF1533: Protein of unknown function (DUF1533); InterPro: IPR011432 This domain is found duplicated in proteins of unknown function. The proteins typically also contain leucine-rich repeats.
Probab=20.90 E-value=82 Score=24.86 Aligned_cols=19 Identities=21% Similarity=0.050 Sum_probs=16.0
Q ss_pred cCceEEEEEEEeeeeeEEE
Q psy8322 549 MPGIYFIEASKEGYELFRD 567 (651)
Q Consensus 549 ~~g~y~l~vs~~Gy~~~~~ 567 (651)
..|.|+|+|++.||+..+.
T Consensus 45 ~~G~~~I~I~A~GY~d~~~ 63 (65)
T PF07550_consen 45 KDGENTIVIKATGYKDKTF 63 (65)
T ss_pred cCCceEEEEEeCCccceEE
Confidence 5789999999999976554
Done!