RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8322
(651 letters)
>d1uwya2 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 296
Score = 156 bits (394), Expect = 2e-43
Identities = 89/263 (33%), Positives = 129/263 (49%), Gaps = 54/263 (20%)
Query: 296 ESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIR 354
+ ++L V+ + P H++G+P K V N+HGDE +GRE++L L++YLV D I
Sbjct: 36 KGRNLWVLVVGRFPKEHRIGIPEFKYVANMHGDETVGRELLLHLIDYLVTSD-GKDPEIT 94
Query: 355 FLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTK----------- 403
L+++TRIH++P++NPDG E + +C GR L FP
Sbjct: 95 NLINSTRIHIMPSMNPDGFEAVKKPDCYYSIGRENYNQYDLNRNFPDAFEYNNVSRQPET 154
Query: 404 ---------------------------------------NKPALTPDTDVFLHLASTYAR 424
+LTPD DVF +LA TYA
Sbjct: 155 VAVMKWLKTETFVLSANLHGGALVASYPFDNGVQATGALYSRSLTPDDDVFQYLAHTYAS 214
Query: 425 LHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPA 484
+P M C F NGVTNG +WY GGM DYNY++ C E+TLE+SCC+YP
Sbjct: 215 RNPNMKKGDECKNKM--NFPNGVTNGYSWYPLQGGMQDYNYIWAQCFEITLELSCCKYPR 272
Query: 485 PSEIPIHWRSNQNALISWLQQVH 507
++P W +N+ +LI +++QVH
Sbjct: 273 EEKLPSFWNNNKASLIEYIKQVH 295
Score = 129 bits (324), Expect = 7e-34
Identities = 81/200 (40%), Positives = 121/200 (60%), Gaps = 12/200 (6%)
Query: 27 NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVG 85
NYH + M L+ + Y+++T L+SIGKSV G++L V+ + P H++G+P K V
Sbjct: 4 NYHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPKEHRIGIPEFKYVA 63
Query: 86 NIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCR 145
N+HGDE +GRE++L L+++LV D I L+++TRIH++P++NPDG E + +C
Sbjct: 64 NMHGDETVGRELLLHLIDYLVTSD-GKDPEITNLINSTRIHIMPSMNPDGFEAVKKPDCY 122
Query: 146 SGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQL 205
GR N N +DLNR FPD F +N S PE AV+ W+ + FV+S L
Sbjct: 123 YSIGRENYNQYDLNRNFPDAFEYNN----------VSRQPETVAVMKWLKTETFVLSANL 172
Query: 206 HGGNVVASYPYDSFYGESKN 225
HGG +VASYP+D+ +
Sbjct: 173 HGGALVASYPFDNGVQATGA 192
Score = 47.5 bits (112), Expect = 2e-06
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Query: 176 LVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQ 235
L+ + D + + + +NS + ++ A D +Y + N N +DLNR
Sbjct: 79 LIDYLVTSDGKDPEITNLINSTRIHIMPSMNPDGFEAVKKPDCYYSIGRENYNQYDLNRN 138
Query: 236 FPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYG 295
FPD F +N S PE AV+ W+ + FV+S LHGG +VASYP+D+
Sbjct: 139 FPDAFEYNN----------VSRQPETVAVMKWLKTETFVLSANLHGGALVASYPFDNGVQ 188
Query: 296 ESKDLLVVNIS 306
+ L +++
Sbjct: 189 ATGALYSRSLT 199
>d1h8la2 c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic domain
{Crested duck (Lophonetta specularioides) [TaxId: 8836]}
Length = 301
Score = 144 bits (363), Expect = 3e-39
Identities = 83/262 (31%), Positives = 129/262 (49%), Gaps = 50/262 (19%)
Query: 296 ESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIR 354
E ++L V+ IS P +H+ G P K +GN+HG+E +GRE++L L+EYL + +
Sbjct: 41 ELRELYVMEISDNPGIHEAGEPEFKYIGNMHGNEVVGRELLLNLIEYLCKNFGTDP-EVT 99
Query: 355 FLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISL------------------- 395
L+ +TRIH++P++NPDG E + EG+ GR L
Sbjct: 100 DLVQSTRIHIMPSMNPDGYEKSQEGDRGGTVGRNNSNNYDLNRNFPDQFFQVTDPPQPET 159
Query: 396 -------------------------FLPFPVTKNKPAL---TPDTDVFLHLASTYARLHP 427
PF + A+ +PD VF LA +Y++ +
Sbjct: 160 LAVMSWLKTYPFVLSANLHGGSLVVNYPFDDDEQGIAIYSKSPDDAVFQQLALSYSKENK 219
Query: 428 TMHMKRPCPG-NTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPS 486
M+ PC F +G+TNGA WY+ GGM D+NYL C E+T+E+ C +YP
Sbjct: 220 KMYQGSPCKDLYPTEYFPHGITNGAQWYNVPGGMQDWNYLNTNCFEVTIELGCVKYPKAE 279
Query: 487 EIPIHWRSNQNALISWLQQVHR 508
E+P +W N+ +L+ +++QVHR
Sbjct: 280 ELPKYWEQNRRSLLQFIKQVHR 301
Score = 126 bits (317), Expect = 7e-33
Identities = 78/205 (38%), Positives = 119/205 (58%), Gaps = 12/205 (5%)
Query: 28 YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGN 86
+H++ M L + Y ++T LYS+GKSV ++L V+ IS P +H+ G P K +GN
Sbjct: 10 HHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEAGEPEFKYIGN 69
Query: 87 IHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRS 146
+HG+E +GRE++L L+E+L + + L+ +TRIH++P++NPDG E + EG+
Sbjct: 70 MHGNEVVGRELLLNLIEYLCKNFGTDP-EVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGG 128
Query: 147 GRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLH 206
GRNN NN+DLNR FPD F + PE AV+ W+ + PFV+S LH
Sbjct: 129 TVGRNNSNNYDLNRNFPDQFFQV----------TDPPQPETLAVMSWLKTYPFVLSANLH 178
Query: 207 GGNVVASYPYDSFYGESKNNINNHD 231
GG++V +YP+D + D
Sbjct: 179 GGSLVVNYPFDDDEQGIAIYSKSPD 203
Score = 43.3 bits (101), Expect = 4e-05
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 186 EVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRS 245
V D + S + ++ S D +NN NN+DLNR FPD F
Sbjct: 94 TDPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGGTVGRNNSNNYDLNRNFPDQFFQV-- 151
Query: 246 NIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYD 291
+ PE AV+ W+ + PFV+S LHGG++V +YP+D
Sbjct: 152 --------TDPPQPETLAVMSWLKTYPFVLSANLHGGSLVVNYPFD 189
>d2c1ca1 c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earworm
(Helicoverpa zea) [TaxId: 7113]}
Length = 312
Score = 134 bits (338), Expect = 1e-35
Identities = 55/279 (19%), Positives = 96/279 (34%), Gaps = 25/279 (8%)
Query: 23 MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVK 82
+ + NY +++ E L+ Y ++ + + +S G+ + + IST P +
Sbjct: 1 LPYDNYQELEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTNFEDENKPVIF 60
Query: 83 IVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG 142
I G IH E I + + LV + LL+ LLP +NPDG +
Sbjct: 61 IDGGIHAREWISPPSVTWAIHKLVEDV-----TENDLLEKFDWILLPVVNPDGYKYTFTN 115
Query: 143 NCRSGRGRNNINN--------HDLNRQFPDYFR----HNRSNIPTLVSTSQSIDPEVQAV 190
+ R+ NN D NR F + N TS + E + V
Sbjct: 116 ERFWRKTRSTNNNPLSQICRGADGNRNFDFVWNSIGTSNSPCSDIYAGTSAFSEVETRVV 175
Query: 191 IDWMNSVP--FVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIP 248
D ++ + L +H + YP+ S+N + H + + N
Sbjct: 176 RDILHEHLARMALYLTMHSFGSMILYPWGHDGSLSQNALGLHTVGVAMASVIQSNALPNF 235
Query: 249 TLVSTSQSIDPEVQAV----IDWM--NSVPFVMSLQLHG 281
+ S + D+ VP + +L G
Sbjct: 236 PPYTVGNSALVIGYYIAGSSEDYAHSIGVPLSYTYELPG 274
Score = 56.7 bits (136), Expect = 3e-09
Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
E + + + IST P + I G IH E I + + LV +
Sbjct: 37 EGRPIKYIKISTTNFEDENKPVIFIDGGIHAREWISPPSVTWAIHKLVEDV-----TEND 91
Query: 356 LLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP 389
LL+ LLP +NPDG + + R+
Sbjct: 92 LLEKFDWILLPVVNPDGYKYTFTNERFWRKTRST 125
Score = 40.2 bits (93), Expect = 6e-04
Identities = 13/101 (12%), Positives = 27/101 (26%), Gaps = 15/101 (14%)
Query: 394 SLFLPFPVTKNKPALTPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAW 453
+ P+ + + + A + + + P + G +
Sbjct: 198 MILYPWGHDGSLS---QNALGLHTVGVAMASVIQSNALPNFPP------YTVGNSALVIG 248
Query: 454 YSFSGGMADYNYLYHGCLELTLEISCCR------YPAPSEI 488
Y +G DY + L T E+ + P I
Sbjct: 249 YYIAGSSEDYAHSIGVPLSYTYELPGLSSGWDGFHLPPQYI 289
>d1jqga1 c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton bollworm
(Helicoverpa armigera) [TaxId: 29058]}
Length = 317
Score = 134 bits (337), Expect = 2e-35
Identities = 52/277 (18%), Positives = 92/277 (33%), Gaps = 21/277 (7%)
Query: 18 RPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLG 77
+ +SF H+Y+ + L+ + + N+ + GKS G+ + + IST
Sbjct: 2 STRSRLSFDKIHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRISTTNFQDAS 61
Query: 78 VPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE 137
P V + +H E + L + LV++ D L++N +LP NPDG
Sbjct: 62 KPVVMMQSLLHCREWVTLPATLYAIHKLVIDVTESD-----LINNIDWIILPVANPDGYV 116
Query: 138 LAVEGNCRSGRGR-------NNINNHDLNRQFPDYFRHNRSNIP---TLVSTSQSIDPEV 187
G+ + R N DLNR F + S+ T S +PE
Sbjct: 117 HTFGGDRYWRKNRATGYMAGNLCMGVDLNRNFGMNWGTASSSSVCSDTFHGRSAFSEPES 176
Query: 188 QAVIDWMNS--VPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRS 245
+ D + + L +H + Y Y + N + H + Q +
Sbjct: 177 SVIRDIIAEHRNRMALYLDIHSFGSMILYGYGN-GVLPSNALQLHLIGVQMAQAIDRVKW 235
Query: 246 NIPTLV---STSQSIDPEVQAVIDWMNSVPFVMSLQL 279
+ + + D+ S
Sbjct: 236 SSNKDYIVGNIFHVLYAASGGASDYAMQAAAPFSYTY 272
Score = 61.4 bits (148), Expect = 9e-11
Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 5/94 (5%)
Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
E + + + IST P V + +H E + L + LV++ D
Sbjct: 43 EGRSIKYLRISTTNFQDASKPVVMMQSLLHCREWVTLPATLYAIHKLVIDVTESD----- 97
Query: 356 LLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP 389
L++N +LP NPDG G+ + R
Sbjct: 98 LINNIDWIILPVANPDGYVHTFGGDRYWRKNRAT 131
Score = 32.9 bits (74), Expect = 0.10
Identities = 11/43 (25%), Positives = 14/43 (32%), Gaps = 8/43 (18%)
Query: 454 YSFSGGMADYNYLYHGCLELTLEISCCR--------YPAPSEI 488
Y+ SGG +DY T E+ R P I
Sbjct: 251 YAASGGASDYAMQAAAPFSYTYELPAYRNSVWFDGFLVDPDFI 293
>d1ayea1 c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo sapiens)
[TaxId: 9606]}
Length = 307
Score = 132 bits (333), Expect = 5e-35
Identities = 52/272 (19%), Positives = 104/272 (38%), Gaps = 17/272 (6%)
Query: 20 AAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVP 79
+ +FG YH + + +E++N + + +IG S + + V+ ST P
Sbjct: 3 SGNFNFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGGDK----P 58
Query: 80 NVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELA 139
+ + IH E + + L +V +Y + S I +LD I LLP NPDG +
Sbjct: 59 AIWLDAGIHAREWVTQATALWTANKIVSDYGKDPS-ITSILDALDIFLLPVTNPDGYVFS 117
Query: 140 VEGNCRSGRGRNNINN-----HDLNRQFPDYFRHNRS----NIPTLVSTSQSIDPEVQAV 190
N + R+ ++ D NR + F + + S + + EV+++
Sbjct: 118 QTKNRMWRKTRSKVSGSLCVGVDPNRNWDAGFGGPGASSNPCSDSYHGPSANSEVEVKSI 177
Query: 191 IDWMNSVP-FVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPT 249
+D++ S + LH + + +PY + + ++ ++ R
Sbjct: 178 VDFIKSHGKVKAFIILHSYSQLLMFPYGYKCTKLDDFDELSEVAQKAAQSLRSLHGTKYK 237
Query: 250 LVSTSQSIDPEVQAVIDWM--NSVPFVMSLQL 279
+ I IDW + + + +L
Sbjct: 238 VGPICSVIYQASGGSIDWSYDYGIKYSFAFEL 269
Score = 54.4 bits (130), Expect = 1e-08
Identities = 17/104 (16%), Positives = 31/104 (29%), Gaps = 14/104 (13%)
Query: 409 TPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYH 468
D D +A A+ ++H + G + Y SGG D++Y Y
Sbjct: 211 LDDFDELSEVAQKAAQSLRSLHGTKYKVGP----------ICSVIYQASGGSIDWSYDYG 260
Query: 469 GCLELTLEI---SCCRY-PAPSEIPIHWRSNQNALISWLQQVHR 508
E+ + +I L + ++ V
Sbjct: 261 IKYSFAFELRDTGRYGFLLPARQILPTAEETWLGLKAIMEHVRD 304
>d1m4la_ c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) [TaxId:
9913]}
Length = 307
Score = 132 bits (332), Expect = 7e-35
Identities = 49/272 (18%), Positives = 95/272 (34%), Gaps = 14/272 (5%)
Query: 18 RPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLG 77
R ++ YH D + + ++ + + IG+S G+ + V+ ST ++
Sbjct: 2 RSTNTFNYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNR-- 59
Query: 78 VPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE 137
P + I IH E I + + + +Y + D + +LD+ I L NPDG
Sbjct: 60 -PAIWIDLGIHSREWITQATGVWFAKKFTEDYGQ-DPSFTAILDSMDIFLEIVTNPDGFA 117
Query: 138 LAVEGNCRSGRGRN-----NINNHDLNRQFPDYFRHNRSN----IPTLVSTSQSIDPEVQ 188
N + R+ D NR + F ++ T + + EV+
Sbjct: 118 FTHSQNRLWRKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVK 177
Query: 189 AVIDWMNS-VPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNI 247
+++D++ F L +H + + YPY + + + + +
Sbjct: 178 SIVDFVKDHGNFKAFLSIHSYSQLLLYPYGYTTQSIPDKTELNQVAKSAVAALKSLYGTS 237
Query: 248 PTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQL 279
S +I IDW + S
Sbjct: 238 YKYGSIITTIYQASGGSIDWSYNQGIKYSFTF 269
Score = 57.1 bits (137), Expect = 2e-09
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
E + + V+ ST ++ P + I IH E I + + + +Y + D +
Sbjct: 43 EGRPIYVLKFSTGGSNR---PAIWIDLGIHSREWITQATGVWFAKKFTEDYGQ-DPSFTA 98
Query: 356 LLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP 389
+LD+ I L NPDG N + R+
Sbjct: 99 ILDSMDIFLEIVTNPDGFAFTHSQNRLWRKTRSV 132
Score = 54.0 bits (129), Expect = 2e-08
Identities = 17/117 (14%), Positives = 34/117 (29%), Gaps = 17/117 (14%)
Query: 394 SLFLPFPVTKNKPALTPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAW 453
L P+ T PD +A + +++ G+
Sbjct: 201 LLLYPYGYTTQSI---PDKTELNQVAKSAVAALKSLYGTSYKYGSI----------ITTI 247
Query: 454 YSFSGGMADYNYLYHGCLELTLEISCCR----YPAPSEIPIHWRSNQNALISWLQQV 506
Y SGG D++Y T E+ S+I + +++ ++
Sbjct: 248 YQASGGSIDWSYNQGIKYSFTFELRDTGRYGFLLPASQIIPTAQETWLGVLTIMEHT 304
>d2bo9a1 c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo sapiens)
[TaxId: 9606]}
Length = 305
Score = 125 bits (315), Expect = 1e-32
Identities = 55/273 (20%), Positives = 102/273 (37%), Gaps = 15/273 (5%)
Query: 22 GMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNV 81
++G YH+ + + E++N + ++ IG S + + V+ ST P V
Sbjct: 3 NFNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGV--RRPAV 60
Query: 82 KIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVE 141
+ IH E I + + +V +Y + D I +L+ I LLP NPDG
Sbjct: 61 WLNAGIHSREWISQATAIWTARKIVSDY-QRDPAITSILEKMDIFLLPVANPDGYVYTQT 119
Query: 142 GNCRSGRGRN-----NINNHDLNRQFPDYFRHNRS----NIPTLVSTSQSIDPEVQAVID 192
N + R+ + D NR + F + + + EV++V+D
Sbjct: 120 QNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVYHGPHANSEVEVKSVVD 179
Query: 193 WMNSVP-FVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLV 251
++ F + LH + + YPY ++ + + R +
Sbjct: 180 FIQKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAKALASVSGTEYQVG 239
Query: 252 STSQSIDPEVQAVIDWM--NSVPFVMSLQLHGG 282
T ++ P + IDW N + F + +L
Sbjct: 240 PTCTTVYPASGSSIDWAYDNGIKFAFTFELRDT 272
Score = 53.3 bits (127), Expect = 3e-08
Identities = 14/108 (12%), Positives = 27/108 (25%), Gaps = 14/108 (12%)
Query: 405 KPALTPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYN 464
PD + +A A+ ++ Y SG D+
Sbjct: 207 SVKKAPDAEELDKVARLAAKALASVSGT----------EYQVGPTCTTVYPASGSSIDWA 256
Query: 465 YLYHGCLELTLEI----SCCRYPAPSEIPIHWRSNQNALISWLQQVHR 508
Y T E+ + ++I L + ++ V
Sbjct: 257 YDNGIKFAFTFELRDTGTYGFLLPANQIIPTAEETWLGLKTIMEHVRD 304
>d1obra_ c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyces
vulgaris [TaxId: 2026]}
Length = 323
Score = 119 bits (298), Expect = 3e-30
Identities = 60/270 (22%), Positives = 96/270 (35%), Gaps = 20/270 (7%)
Query: 28 YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNI 87
YHNY+ M ++ Y N+ + +SIGKS G++L V IS P V
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVLYTALH 68
Query: 88 HGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSG 147
H E + E+ L L+ Y DS I L++N I+++ N+NPDG E +
Sbjct: 69 HAREHLTVEMALYTLDLFTQNYNL-DSRITNLVNNREIYIVFNINPDGGEYDISSGSYKS 127
Query: 148 RGRNNINNH-------DLNRQFPDYFRHNRSNI-----PTLVSTSQSIDPEVQAVIDWMN 195
+N N DLNR + + + T S PE A+ D++N
Sbjct: 128 WRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETAAMRDFIN 187
Query: 196 SV------PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPT 249
S + H + + YPY Y + ++ D F
Sbjct: 188 SRVVGGKQQIKTLITFHTYSELILYPYGYTYTDVPSD-MTQDDFNVFKTMANTMAQTNGY 246
Query: 250 LVSTSQSIDPEVQAVIDWMNSVPFVMSLQL 279
+ + + DW + +
Sbjct: 247 TPQQASDLYITDGDMTDWAYGQHKIFAFTF 276
Score = 82.6 bits (203), Expect = 9e-18
Identities = 44/275 (16%), Positives = 72/275 (26%), Gaps = 64/275 (23%)
Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
E ++L V IS P V H E + E+ L L+ Y DS I
Sbjct: 40 EGRELWAVKISDNVGTDENEPEVLYTALHHAREHLTVEMALYTLDLFTQNYNL-DSRITN 98
Query: 356 LLDNTRIHLLPNLNPDGSELAVEGNC-------RSGRGRTPPFLISLFLPFP-------- 400
L++N I+++ N+NPDG E + R + L +
Sbjct: 99 LVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGG 158
Query: 401 ---------------------------VTKNKPALTPDTDVFLHLAST-YARLHPTMHMK 432
+ + + L+P +
Sbjct: 159 SSGSPSSETYRGRSAFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYGYTY 218
Query: 433 RPCPGNTVLKFEN---------------GVTNGAAWYSFSGGMADYNYLYHGCLELTLEI 477
P + N + Y G M D+ Y H T E+
Sbjct: 219 TDVPSDMTQDDFNVFKTMANTMAQTNGYTPQQASDLYITDGDMTDWAYGQHKIFAFTFEM 278
Query: 478 SCCR-----YPAPSEIPIHWRSNQNALISWLQQVH 507
YP I N+ A++ ++
Sbjct: 279 YPTSYNPGFYPPDEVIGRETSRNKEAVLYVAEKAD 313
Score = 37.2 bits (85), Expect = 0.004
Identities = 18/88 (20%), Positives = 30/88 (34%), Gaps = 11/88 (12%)
Query: 223 SKNNINNHDLNRQFPDYFRHNRSNI-----PTLVSTSQSIDPEVQAVIDWMNSV------ 271
S ++ DLNR + + + T S PE A+ D++NS
Sbjct: 136 SGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETAAMRDFINSRVVGGKQ 195
Query: 272 PFVMSLQLHGGNVVASYPYDSFYGESKD 299
+ H + + YPY Y +
Sbjct: 196 QIKTLITFHTYSELILYPYGYTYTDVPS 223
>d1z5ra1 c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 304
Score = 115 bits (289), Expect = 4e-29
Identities = 48/269 (17%), Positives = 96/269 (35%), Gaps = 15/269 (5%)
Query: 22 GMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNV 81
G S+ Y+N++ + + T ++ +IG + LG ++ ++ + ++ P +
Sbjct: 1 GHSYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPNK---PAI 57
Query: 82 KIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVE 141
+ H E I + V+ Y +S++ L+ ++LP LN DG
Sbjct: 58 FMDCGFHAREWISHAFCQWFVREAVLTY-GYESHMTEFLNKLDFYVLPVLNIDGYIYTWT 116
Query: 142 GNCRSGRGRNN-----INNHDLNRQFPDYFRHNRS----NIPTLVSTSQSIDPEVQAVID 192
N + R+ D NR F + + T ++ + E +A+ D
Sbjct: 117 KNRMWRKTRSTNAGTTCIGTDPNRNFDAGWCTTGASTDPCDETYCGSAAESEKETKALAD 176
Query: 193 WMNSVP--FVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTL 250
++ + L +H + + YPY Y +NN ++L + T
Sbjct: 177 FIRNNLSSIKAYLTIHSYSQMILYPYSYDYKLPENNAELNNLAKAAVKELATLYGTKYTY 236
Query: 251 VSTSQSIDPEVQAVIDWMNSVPFVMSLQL 279
+ +I P DW S
Sbjct: 237 GPGATTIYPAAGGSDDWAYDQGIKYSFTF 265
Score = 46.3 bits (109), Expect = 5e-06
Identities = 13/84 (15%), Positives = 24/84 (28%), Gaps = 13/84 (15%)
Query: 395 LFLPFPVTKNKPALTPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWY 454
+ P+ P + +LA + T++ + G Y
Sbjct: 198 ILYPYSYDYKLP---ENNAELNNLAKAAVKELATLYGTKYTYG----------PGATTIY 244
Query: 455 SFSGGMADYNYLYHGCLELTLEIS 478
+GG D+ Y T E+
Sbjct: 245 PAAGGSDDWAYDQGIKYSFTFELR 268
>d1uwya1 b.3.2.1 (A:297-403) Carboxypeptidase M C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 41.0 bits (95), Expect = 4e-05
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 509 GVKGLVLDETGSRL--ANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFR 566
GVKG V D+ G+ L V + + +++ GEY+ +L+PG Y I + G++
Sbjct: 1 GVKGQVFDQNGNPLPNVIVEVQDRKHICPYRTNKYGEYYLLLLPGSYIINVTVPGHDPHI 60
Query: 567 DRIKIPESTSPVVGAVLESLLEFNITMTSIQNDKVGNASKEGYELFRD 614
++ IPE + + LL F + SI V N S L+R+
Sbjct: 61 TKVIIPEKSQNFSALKKDILLPFQGQLDSI---PVSNPSCPMIPLYRN 105
>d1h8la1 b.3.2.1 (A:305-383) Carboxypeptidase D C-terminal domain
{Crested duck (Lophonetta specularioides) [TaxId: 8836]}
Length = 79
Score = 40.2 bits (93), Expect = 4e-05
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 509 GVKGLVLD-ETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRD 567
G+ G VLD G + N +IS+A N + + G+YWR+L+ G Y + AS GY+
Sbjct: 1 GIWGFVLDATDGRGILNATISVADINHPVTTYKDGDYWRLLVQGTYKVTASARGYDPVTK 60
Query: 568 RIKIPESTSPVVGAVLE 584
+++ V L
Sbjct: 61 TVEVDSKGGVQVNFTLS 77
>d2gu2a1 c.56.5.7 (A:4-310) Aspartoacylase AspA {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 307
Score = 41.5 bits (97), Expect = 2e-04
Identities = 18/92 (19%), Positives = 27/92 (29%), Gaps = 22/92 (23%)
Query: 78 VPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE 137
+ + I G HG+E G ++ L++ + NP
Sbjct: 7 IKKIAIFGGTHGNELTGVFLVTHWLKNG----------AEVHRAGLEV-KPFITNP---- 51
Query: 138 LAVEGNCRSGRGRNNINNHDLNRQFPDYFRHN 169
AVE R + DLNR F
Sbjct: 52 RAVEKCTRY-------IDCDLNRVFDLENLSK 76
Score = 37.2 bits (86), Expect = 0.005
Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 27/128 (21%)
Query: 315 VPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG-------------DSNIRFL-LDNT 360
+ + I G HG+E G ++ L+ + G + R++ D
Sbjct: 7 IKKIAIFGGTHGNELTGVFLVTHWLKNGAEVHRAGLEVKPFITNPRAVEKCTRYIDCDLN 66
Query: 361 RIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLAS 420
R+ L NL+ + SE R+ + LF P DV L +
Sbjct: 67 RVFDLENLSKEMSEDLPYEVRRAQ------EINHLFGPK-------NSDDAYDVVFDLHN 113
Query: 421 TYARLHPT 428
T + + T
Sbjct: 114 TTSNMGCT 121
>d2g9da1 c.56.5.7 (A:3-342) Succinylglutamate desuccinylase AstE
{Vibrio cholerae [TaxId: 666]}
Length = 340
Score = 40.4 bits (94), Expect = 5e-04
Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 21/88 (23%)
Query: 77 GVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGS 136
N+ I IHGDE E++ + ++ +V + F++ +
Sbjct: 50 ATKNMVISCGIHGDETAPMELLDKWIDDIVSGFQPVAERCLFIMAH-------------- 95
Query: 137 ELAVEGNCRSGRGRNNINNHDLNRQFPD 164
A + R +LNR F D
Sbjct: 96 PQATVRHVR-------FIEQNLNRLFDD 116
Score = 34.6 bits (79), Expect = 0.030
Identities = 10/46 (21%), Positives = 21/46 (45%)
Query: 314 GVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDN 359
N+ I IHGDE E++ + ++ +V + F++ +
Sbjct: 50 ATKNMVISCGIHGDETAPMELLDKWIDDIVSGFQPVAERCLFIMAH 95
>d1yw6a1 c.56.5.7 (A:1-322) Succinylglutamate desuccinylase AstE
{Escherichia coli [TaxId: 562]}
Length = 322
Score = 39.3 bits (91), Expect = 0.001
Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 21/94 (22%)
Query: 79 PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL 138
+ I IHG+E E++ LL + I L+ NP
Sbjct: 44 GALVISAGIHGNETAPVEMLDALLGAISHGEIPL----------RWRLLVILGNP----P 89
Query: 139 AVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSN 172
A++ R + D+NR F ++ +
Sbjct: 90 ALKQGKR-------YCHSDMNRMFGGRWQLFAES 116
Score = 33.9 bits (77), Expect = 0.059
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 316 PNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDN 359
+ I IHG+E E++ LL + I + +L N
Sbjct: 44 GALVISAGIHGNETAPVEMLDALLGAISHGEIPLRWRLLVILGN 87
>d1yw4a1 c.56.5.7 (A:2-332) Succinylglutamate desuccinylase AstE
{Chromobacterium violaceum [TaxId: 536]}
Length = 331
Score = 39.3 bits (91), Expect = 0.001
Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 21/90 (23%)
Query: 74 HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNP 133
G +V + +HG+E E++ +L + + + + L+ N
Sbjct: 41 DARGADSVLLSCGVHGNETAPIEVVDGMLTDIAAGQLALNCRL----------LVMFANL 90
Query: 134 DGSELAVEGNCRSGRGRNNINNHDLNRQFP 163
D A+ R G N+D+NR F
Sbjct: 91 D----AIRQGVRYG-------NYDMNRLFN 109
Score = 33.1 bits (75), Expect = 0.082
Identities = 8/49 (16%), Positives = 20/49 (40%)
Query: 311 HQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDN 359
G +V + +HG+E E++ +L + + + + + N
Sbjct: 41 DARGADSVLLSCGVHGNETAPIEVVDGMLTDIAAGQLALNCRLLVMFAN 89
>d2bcoa1 c.56.5.7 (A:4-342) Succinylglutamate desuccinylase AstE
{Vibrio parahaemolyticus [TaxId: 670]}
Length = 339
Score = 37.7 bits (87), Expect = 0.003
Identities = 14/85 (16%), Positives = 25/85 (29%), Gaps = 21/85 (24%)
Query: 79 PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL 138
N+ I IHGDE E++ +++ + L +P+ +
Sbjct: 51 KNIIISCGIHGDETAPMELVDSIIKDI----------ESGFQKVDARCLFIIAHPESTLA 100
Query: 139 AVEGNCRSGRGRNNINNHDLNRQFP 163
+LNR F
Sbjct: 101 HTRF-----------LEENLNRLFD 114
Score = 33.4 bits (76), Expect = 0.083
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 316 PNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDN 359
N+ I IHGDE E++ +++ + + + D+ F++ +
Sbjct: 51 KNIIISCGIHGDETAPMELVDSIIKDIESGFQKVDARCLFIIAH 94
>d1ovla_ a.123.1.1 (A:) Orphan nuclear receptor NURR1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 236
Score = 30.0 bits (67), Expect = 0.66
Identities = 6/52 (11%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 155 NHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLH 206
++ + PDY + + + + + ++ + W +P L
Sbjct: 21 DYSRFQANPDY-QMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKA 71
Score = 30.0 bits (67), Expect = 0.66
Identities = 6/52 (11%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 229 NHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLH 280
++ + PDY + + + + + ++ + W +P L
Sbjct: 21 DYSRFQANPDY-QMSGDDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKA 71
>d1n4qb_ a.102.4.3 (B:) Protein farnesyltransferase, beta-subunit
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 346
Score = 30.4 bits (68), Expect = 0.78
Identities = 25/175 (14%), Positives = 57/175 (32%), Gaps = 22/175 (12%)
Query: 160 RQFPDYFRHNRSNIPTLV-------STSQSIDPEV-QAVIDWMNSVPFVMSLQLHGGNVV 211
+ P+ + ++ T+ S+D +I+W + SLQ+
Sbjct: 17 QVLPERYSSLETSRLTIAFFALSGLDMLDSLDVVNKDDIIEW------IYSLQVLPTEDR 70
Query: 212 ASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQS--IDPEVQAVIDWMN 269
++ F G S I + + + +I + I + + +D
Sbjct: 71 SNLDRCGFRGSSYLGIPFNPSKNPGTAHPYDS-GHIAMTYTGLSCLIILGDDLSRVDKEA 129
Query: 270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNI 324
+ + +LQL G S+ E+ D+ V ++ + L + +
Sbjct: 130 CLAGLRALQLEDG----SFCAVPEGSEN-DMRFVYCASCICYMLNNWSGMDMKKA 179
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 29.1 bits (63), Expect = 1.4
Identities = 14/162 (8%), Positives = 40/162 (24%), Gaps = 6/162 (3%)
Query: 114 SNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNI 173
N + + + + P +PDGS+LA + + F +
Sbjct: 29 YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAP 88
Query: 174 P------TLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNI 227
L V+D + ++ +P + +
Sbjct: 89 AFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQA 148
Query: 228 NNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMN 269
+ + + R + + + + ++ +
Sbjct: 149 GRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSS 190
Score = 27.5 bits (59), Expect = 4.7
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 351 SNIRFLLDNTRIHLLPNLNPDGSELA 376
N + + + + P +PDGS+LA
Sbjct: 29 YNQFVVHRSPQPLMSPAWSPDGSKLA 54
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Length = 354
Score = 28.0 bits (61), Expect = 3.7
Identities = 33/277 (11%), Positives = 82/277 (29%), Gaps = 18/277 (6%)
Query: 40 NFTRVY---ANMTELY-SIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGR 95
F RV+ ++++ K + L N + Q G + D+P GR
Sbjct: 49 TFDRVFDMSCKQSDIFDFSIKPTVDDILNGYNGTVFAYGQTGAGKSYTMMGTSIDDPDGR 108
Query: 96 EIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINN 155
+I R++E + + +NI + + + + + D + +
Sbjct: 109 GVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQNDNLPVHEEKNRGVYV 168
Query: 156 HDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYP 215
L + + + + + +S+ + Q + A
Sbjct: 169 KGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVETGSAKSG 228
Query: 216 YDSFYG-ESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFV 274
+ + Q + + ++ L ++ + + + +S
Sbjct: 229 QLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDS-KLT 287
Query: 275 MSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVH 311
LQ +S G S+ L++N S + +
Sbjct: 288 RILQ------------ESLGGNSRTTLIINCSPSSYN 312
>d1k8kf_ d.198.2.1 (F:) ARPC4 (20 kDa subunit) {Cow (Bos taurus)
[TaxId: 9913]}
Length = 167
Score = 27.0 bits (60), Expect = 5.1
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 19/99 (19%)
Query: 467 YHGCLELTLEISCCRYPAPSEIP-------IHWRSNQNALISWLQQVHRGVKGLVLDETG 519
Y + TL+ + C S++ + RS++ L+ + + R K VL E
Sbjct: 7 YLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPV-TISRNEKEKVLIEGS 65
Query: 520 SRLANVSIS----------LAYKNVSFMSSQRGEYWRVL 548
VSI+ L +K + FM R E + +L
Sbjct: 66 INSVRVSIAVKQADEIEKILCHKFMRFM-MMRAENFFIL 103
>d1dcfa_ c.23.1.2 (A:) Receiver domain of the ethylene receptor
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 134
Score = 26.5 bits (58), Expect = 5.3
Identities = 9/72 (12%), Positives = 26/72 (36%), Gaps = 5/72 (6%)
Query: 327 DEPIGREIILRLLE---YLVVEYIRGDSNIRFLLDNTRIHLLPNLNP--DGSELAVEGNC 381
+ + R + LL V + +R + ++ + P + ++A+ +
Sbjct: 15 ENGVSRMVTKGLLVHLGCEVTTVSSNEECLRVVSHEHKVVFMDVCMPGVENYQIALRIHE 74
Query: 382 RSGRGRTPPFLI 393
+ + R L+
Sbjct: 75 KFTKQRHQRPLL 86
>d1osha_ a.123.1.1 (A:) Bile acid receptor FXR {Human (Homo sapiens)
[TaxId: 9606]}
Length = 231
Score = 26.9 bits (59), Expect = 7.5
Identities = 4/27 (14%), Positives = 12/27 (44%)
Query: 180 SQSIDPEVQAVIDWMNSVPFVMSLQLH 206
++ VQ ++++ +P +L
Sbjct: 48 TEMATNHVQVLVEFTKKLPGFQTLDHE 74
Score = 26.9 bits (59), Expect = 7.5
Identities = 4/27 (14%), Positives = 12/27 (44%)
Query: 254 SQSIDPEVQAVIDWMNSVPFVMSLQLH 280
++ VQ ++++ +P +L
Sbjct: 48 TEMATNHVQVLVEFTKKLPGFQTLDHE 74
>d2e2ra1 a.123.1.1 (A:234-456) Orphan nuclear receptor ERR3 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 26.5 bits (58), Expect = 7.8
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 171 SNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLH 206
S+I L + D E+ +I W +P +L L
Sbjct: 27 SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLA 62
Score = 26.5 bits (58), Expect = 7.8
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 245 SNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLH 280
S+I L + D E+ +I W +P +L L
Sbjct: 27 SDIKALTTLCDLADRELVVIIGWAKHIPGFSTLSLA 62
>d1mska_ d.173.1.1 (A:) Methionine synthase SAM-binding domain
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 26.9 bits (59), Expect = 8.2
Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 9/68 (13%)
Query: 180 SQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYP---YDSFYGESKNNINNHDLNRQF 236
Q ++ ++ + ++++ PF M+ L G YP D G + D N
Sbjct: 31 VQEVEASIETLRNYIDWTPFFMTWSLAGK-----YPRILEDEVVGVEAQRLFK-DANDML 84
Query: 237 PDYFRHNR 244
Sbjct: 85 DKLSAEKT 92
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.137 0.410
Gapped
Lambda K H
0.267 0.0362 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,465,645
Number of extensions: 120585
Number of successful extensions: 429
Number of sequences better than 10.0: 1
Number of HSP's gapped: 395
Number of HSP's successfully gapped: 73
Length of query: 651
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 560
Effective length of database: 1,158,166
Effective search space: 648572960
Effective search space used: 648572960
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.4 bits)