Query psy833
Match_columns 642
No_of_seqs 493 out of 2444
Neff 8.2
Searched_HMMs 29240
Date Sat Aug 17 00:56:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy833.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/833hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gsx_A Complement receptor typ 100.0 1.4E-34 4.8E-39 344.7 35.0 416 116-640 253-744 (951)
2 1ntj_A Complement receptor rel 100.0 9E-35 3.1E-39 304.7 22.2 269 117-489 3-320 (320)
3 2gsx_A Complement receptor typ 100.0 1E-32 3.4E-37 328.7 33.8 361 141-639 472-875 (951)
4 1qub_A Protein (human BETA2-gl 100.0 4.6E-34 1.6E-38 298.8 18.9 275 117-491 2-309 (319)
5 1haq_A Complement factor H; im 100.0 1.9E-32 6.7E-37 332.4 31.7 416 61-638 636-1134(1213)
6 2c8i_E CD55, complement decay- 100.0 5E-33 1.7E-37 290.9 21.7 272 118-490 2-316 (316)
7 2q7z_A Complement receptor typ 100.0 1.2E-31 4.2E-36 337.8 34.7 323 140-593 478-841 (1931)
8 1haq_A Complement factor H; im 100.0 7.5E-32 2.6E-36 327.2 29.1 272 118-502 792-1094(1213)
9 2q7z_A Complement receptor typ 100.0 3.7E-31 1.3E-35 333.5 36.0 504 5-640 24-626 (1931)
10 3o8e_B Membrane cofactor prote 100.0 1.3E-32 4.4E-37 278.4 18.1 225 122-490 3-251 (252)
11 1ntl_A CRRY-IG; immunology, co 100.0 1.6E-32 5.6E-37 308.7 20.8 271 118-491 2-319 (551)
12 2xrb_A Complement regulatory p 100.0 2.2E-31 7.6E-36 274.5 16.6 231 116-489 35-289 (290)
13 2wii_C H factor 1, complement 100.0 7.9E-31 2.7E-35 268.8 18.1 164 117-310 6-181 (277)
14 1ok3_A CD55, CR, DAF, compleme 100.0 1.3E-30 4.6E-35 263.9 16.3 164 118-310 3-174 (254)
15 3iyp_F Complement decay-accele 100.0 3.5E-30 1.2E-34 274.3 17.5 245 116-502 33-301 (381)
16 1ntj_A Complement receptor rel 100.0 3.6E-29 1.2E-33 262.1 20.2 250 61-381 30-319 (320)
17 1rid_A Complement control prot 100.0 1.7E-29 5.7E-34 254.2 15.0 209 119-382 2-243 (244)
18 2c8i_E CD55, complement decay- 100.0 1.1E-28 3.7E-33 258.0 20.3 255 61-381 27-314 (316)
19 1qub_A Protein (human BETA2-gl 100.0 1.5E-28 5E-33 257.0 18.4 209 61-317 27-244 (319)
20 1ntl_A CRRY-IG; immunology, co 100.0 3.6E-28 1.2E-32 273.3 20.9 252 61-381 28-316 (551)
21 3o8e_B Membrane cofactor prote 100.0 9E-28 3.1E-32 242.8 17.5 201 61-310 25-238 (252)
22 1ok3_A CD55, CR, DAF, compleme 99.9 2.4E-27 8.2E-32 240.0 14.5 195 61-310 28-237 (254)
23 1rid_A Complement control prot 99.9 1.1E-26 3.6E-31 233.7 9.6 206 61-329 30-241 (244)
24 2xrb_A Complement regulatory p 99.9 3.6E-26 1.2E-30 235.6 13.3 197 61-310 63-277 (290)
25 3iyp_F Complement decay-accele 99.9 2E-25 6.7E-30 237.7 17.3 203 61-318 60-287 (381)
26 3erb_A Complement C2; C3/C5 co 99.9 2.4E-25 8.3E-30 220.7 16.8 169 118-330 3-184 (223)
27 2wii_C H factor 1, complement 99.9 1.4E-25 4.9E-30 229.6 12.4 199 61-310 34-240 (277)
28 3sw0_X H factor 1, complement 99.9 1.7E-23 5.7E-28 201.9 12.8 161 116-310 2-177 (188)
29 3erb_A Complement C2; C3/C5 co 99.9 3.8E-23 1.3E-27 204.9 13.1 105 179-310 2-113 (223)
30 3hrz_D Complement factor B; se 99.9 6.4E-23 2.2E-27 238.7 16.8 176 116-332 9-195 (741)
31 2uwn_A H factor 1, human compl 99.9 5E-23 1.7E-27 198.3 8.2 166 116-330 3-186 (187)
32 3t5o_A Complement component C6 99.9 8.4E-22 2.9E-26 232.0 12.9 225 33-310 493-727 (913)
33 3sw0_X H factor 1, complement 99.8 9.7E-21 3.3E-25 182.5 12.4 107 178-309 2-110 (188)
34 2qy0_A Complement C1R subcompo 99.8 7.3E-20 2.5E-24 171.4 11.4 136 116-270 2-157 (159)
35 3gov_A MAsp-1; complement, ser 99.8 7.9E-20 2.7E-24 170.4 11.4 135 116-269 5-152 (155)
36 3hrz_D Complement factor B; se 99.8 5.3E-20 1.8E-24 214.1 12.3 106 174-310 5-122 (741)
37 1gkg_A Complement receptor typ 99.8 1.3E-19 4.6E-24 165.0 11.4 111 175-310 1-120 (136)
38 1gkn_A Complement receptor typ 99.8 1.5E-19 5.3E-24 162.8 10.8 116 116-258 3-127 (128)
39 2uwn_A H factor 1, human compl 99.8 1.2E-19 4.1E-24 174.6 9.0 111 178-310 3-114 (187)
40 1ly2_A CD21, complement recept 99.8 6.3E-19 2.1E-23 159.3 9.5 116 117-258 2-130 (130)
41 1gkn_A Complement receptor typ 99.8 1.8E-18 6.3E-23 155.7 11.2 118 178-330 3-124 (128)
42 1h03_P Complement decay-accele 99.8 1.1E-18 3.7E-23 156.6 8.7 115 118-257 2-125 (125)
43 1h03_P Complement decay-accele 99.7 2.8E-18 9.7E-23 153.8 9.8 116 180-329 2-122 (125)
44 3gov_A MAsp-1; complement, ser 99.7 5E-18 1.7E-22 158.2 11.4 123 175-325 2-129 (155)
45 1ly2_A CD21, complement recept 99.7 5.4E-18 1.9E-22 153.1 11.0 104 179-310 2-115 (130)
46 2a55_A C4B-binding protein; co 99.7 1E-18 3.5E-23 158.4 6.1 114 118-258 2-126 (133)
47 1gkg_A Complement receptor typ 99.7 6.1E-18 2.1E-22 154.0 9.6 117 116-256 4-136 (136)
48 2qy0_A Complement C1R subcompo 99.7 2.2E-17 7.5E-22 154.5 13.3 105 179-301 3-109 (159)
49 2a55_A C4B-binding protein; co 99.7 2.2E-18 7.4E-23 156.2 5.3 119 179-331 1-124 (133)
50 2aty_A Complement receptor chi 99.7 5.3E-17 1.8E-21 173.5 11.9 126 117-269 2-140 (376)
51 3t5o_A Complement component C6 99.7 4.7E-17 1.6E-21 191.7 8.3 156 118-310 622-782 (913)
52 2yby_A Complement factor H; im 99.6 1.5E-16 5.2E-21 142.3 6.1 110 117-257 3-124 (124)
53 3r62_A H factor 1, complement 99.6 3E-16 1E-20 141.4 4.6 119 116-257 4-128 (129)
54 3r62_A H factor 1, complement 99.6 1.1E-15 3.6E-20 137.8 7.2 107 178-310 4-118 (129)
55 2aty_A Complement receptor chi 99.6 3.1E-15 1.1E-19 159.8 11.3 113 179-318 2-131 (376)
56 4ayi_A H factor 1, complement 99.5 1.4E-15 4.9E-20 136.1 3.6 109 180-310 6-115 (125)
57 4ayi_A H factor 1, complement 99.5 2.5E-15 8.5E-20 134.5 4.5 112 116-256 4-125 (125)
58 2yby_A Complement factor H; im 99.5 3.3E-15 1.1E-19 133.5 4.2 109 179-311 3-114 (124)
59 1zjk_A Mannan-binding lectin s 99.5 1E-13 3.4E-18 149.5 15.1 125 166-310 3-131 (403)
60 1zjk_A Mannan-binding lectin s 99.5 5.1E-14 1.7E-18 151.7 11.1 127 116-265 14-156 (403)
61 2ehf_A CUB and sushi domain-co 99.4 3.1E-13 1.1E-17 108.7 7.5 69 169-258 2-70 (73)
62 2yra_A Seizure 6-like protein 99.3 2.6E-12 9E-17 103.5 7.2 70 176-264 3-72 (74)
63 1gpz_A Complement C1R componen 99.2 6.2E-11 2.1E-15 127.4 11.9 133 118-264 2-149 (399)
64 2b5i_D Interleukin-2 receptor 99.1 7E-11 2.4E-15 112.7 8.8 115 118-258 2-166 (217)
65 1gpz_A Complement C1R componen 99.1 2E-10 6.9E-15 123.3 12.6 114 179-310 1-125 (399)
66 3tvj_A Mannan-binding lectin s 99.1 1.2E-10 4.2E-15 96.5 7.9 73 175-265 2-81 (86)
67 1srz_A Gamma-aminobutyric acid 99.1 8E-11 2.7E-15 93.0 5.0 67 173-258 1-68 (68)
68 2ehf_A CUB and sushi domain-co 99.1 2.1E-10 7.2E-15 92.0 7.3 67 248-331 2-68 (73)
69 2yra_A Seizure 6-like protein 99.0 1.9E-10 6.5E-15 92.5 5.8 65 115-185 4-72 (74)
70 2b5i_D Interleukin-2 receptor 99.0 3.7E-10 1.3E-14 107.8 8.6 104 180-310 2-149 (217)
71 4aqb_A Mannan-binding lectin s 98.6 2.6E-08 8.9E-13 105.4 6.5 84 175-272 276-360 (361)
72 1srz_A Gamma-aminobutyric acid 98.6 1.5E-08 5.3E-13 79.8 2.6 57 117-179 6-68 (68)
73 1jma_B Herpesvirus entry media 98.5 7.4E-08 2.5E-12 90.0 4.5 104 6-111 13-136 (167)
74 3tvj_A Mannan-binding lectin s 98.4 2.3E-07 7.8E-12 76.6 5.8 64 116-186 5-81 (86)
75 2hey_R Tumor necrosis factor r 98.4 3.5E-07 1.2E-11 83.5 6.7 98 8-109 3-111 (146)
76 1jma_B Herpesvirus entry media 98.3 2.2E-07 7.6E-12 86.8 4.0 87 11-103 3-101 (167)
77 1sg1_X Tumor necrosis factor r 98.3 7.7E-07 2.6E-11 82.7 6.6 100 9-110 16-129 (161)
78 2hey_R Tumor necrosis factor r 98.3 1.1E-06 3.9E-11 80.1 7.0 88 9-102 19-120 (146)
79 3alq_R Tumor necrosis factor r 98.2 8.6E-07 2.9E-11 83.3 4.5 82 8-90 4-96 (173)
80 3alq_R Tumor necrosis factor r 98.1 8.3E-07 2.8E-11 83.4 3.0 104 6-111 19-141 (173)
81 1ext_A Tumor necrosis factor r 98.1 7.9E-07 2.7E-11 82.6 2.2 44 11-54 4-54 (162)
82 3me4_A Tumor necrosis factor r 98.1 1.7E-06 5.9E-11 83.8 4.5 45 66-110 113-161 (216)
83 4aqb_A Mannan-binding lectin s 98.0 1.9E-06 6.3E-11 91.0 3.7 74 117-191 280-358 (361)
84 3u3p_A Tumor necrosis factor r 98.0 3.1E-06 1.1E-10 85.4 4.2 101 8-110 25-138 (313)
85 1sg1_X Tumor necrosis factor r 97.9 1.5E-05 5.1E-10 73.9 7.5 95 11-109 3-107 (161)
86 3urf_Z Tumor necrosis factor r 97.9 3.9E-06 1.3E-10 78.3 3.0 103 7-111 18-133 (171)
87 2uwi_A CRME protein; receptor, 97.8 4.1E-06 1.4E-10 75.8 1.8 100 8-109 16-134 (142)
88 1du3_A Death receptor 5; trail 97.8 1.1E-05 3.8E-10 71.8 4.5 27 9-35 25-52 (130)
89 3k51_B Decoy receptor 3; DCR3, 97.8 9.2E-06 3.2E-10 76.2 3.4 102 8-111 21-135 (176)
90 3qd6_R CD40L receptor, tumor n 97.7 3.6E-05 1.2E-09 72.4 6.5 100 9-110 18-134 (177)
91 3me4_A Tumor necrosis factor r 97.7 3.7E-05 1.3E-09 74.4 5.6 26 65-90 131-161 (216)
92 2psm_F Interleukin-15 receptor 97.6 6.4E-05 2.2E-09 59.1 5.0 60 178-257 8-73 (78)
93 1du3_A Death receptor 5; trail 97.6 3.1E-05 1.1E-09 68.9 3.3 90 14-109 14-114 (130)
94 3u3p_A Tumor necrosis factor r 97.5 0.00011 3.6E-09 74.2 6.2 75 13-88 9-98 (313)
95 3qd6_R CD40L receptor, tumor n 97.4 0.00012 3.9E-09 68.9 5.0 95 10-110 4-113 (177)
96 1ext_A Tumor necrosis factor r 97.1 0.00059 2E-08 63.0 6.3 121 27-154 4-139 (162)
97 3tje_F Tumor necrosis factor r 97.0 0.0011 3.6E-08 60.7 6.5 77 11-90 31-121 (156)
98 2z3q_B Interleukin-15 receptor 97.0 0.00085 2.9E-08 55.3 4.9 59 178-256 5-69 (107)
99 2uwi_A CRME protein; receptor, 96.9 0.00067 2.3E-08 61.1 4.0 75 12-88 2-89 (142)
100 1elv_A Complement C1S componen 96.6 0.0024 8.1E-08 66.2 6.8 69 179-266 2-76 (333)
101 3tje_F Tumor necrosis factor r 96.6 0.0011 3.7E-08 60.6 3.6 64 9-74 44-121 (156)
102 3k51_B Decoy receptor 3; DCR3, 96.6 0.0028 9.5E-08 59.2 6.3 50 23-72 20-74 (176)
103 3fl7_A Ephrin receptor; ATP-bi 96.6 0.0015 5.1E-08 72.1 5.1 59 6-72 262-320 (536)
104 3urf_Z Tumor necrosis factor r 96.6 0.0014 4.8E-08 60.9 4.2 65 23-88 18-92 (171)
105 4fhq_A Tumor necrosis factor r 96.2 0.0014 4.7E-08 58.4 1.7 76 11-89 5-92 (134)
106 4fhq_A Tumor necrosis factor r 95.9 0.0054 1.8E-07 54.5 4.1 64 9-74 18-93 (134)
107 1mox_A Epidermal growth factor 95.2 0.012 4.1E-07 64.2 4.4 85 6-104 221-307 (501)
108 2psm_F Interleukin-15 receptor 95.2 0.019 6.5E-07 45.1 4.3 46 257-310 8-55 (78)
109 4f4o_C Haptoglobin; globin fol 95.2 0.02 6.8E-07 59.6 5.9 61 179-266 31-96 (347)
110 1mox_A Epidermal growth factor 94.4 0.04 1.4E-06 60.0 5.9 70 7-87 189-261 (501)
111 3pdd_A Glycoside hydrolase, fa 93.9 0.12 4.2E-06 48.6 7.6 86 547-642 60-163 (190)
112 2z3q_B Interleukin-15 receptor 93.8 0.062 2.1E-06 44.3 4.4 46 257-310 5-52 (107)
113 1m6b_A C-ER, receptor protein- 93.3 0.028 9.5E-07 63.1 2.2 28 23-51 234-262 (621)
114 1yy9_A Epidermal growth factor 93.2 0.041 1.4E-06 61.7 3.4 22 61-82 282-305 (624)
115 4f4o_C Haptoglobin; globin fol 93.0 0.09 3.1E-06 54.6 5.4 60 116-187 30-96 (347)
116 3fl7_A Ephrin receptor; ATP-bi 93.0 0.087 3E-06 58.0 5.5 56 66-126 281-337 (536)
117 1elv_A Complement C1S componen 92.0 0.14 4.7E-06 52.8 5.3 63 117-186 2-75 (333)
118 1klo_A Laminin; glycoprotein; 92.0 0.24 8.2E-06 45.3 6.3 37 6-46 17-57 (162)
119 3i2t_A Epidermal growth factor 91.6 0.1 3.5E-06 57.4 3.8 21 61-83 283-303 (551)
120 1n8y_C Protooncoprotein; tyros 91.0 0.099 3.4E-06 58.4 3.0 25 6-34 228-253 (608)
121 1klo_A Laminin; glycoprotein; 90.2 0.33 1.1E-05 44.4 5.3 26 7-36 75-100 (162)
122 3hny_M Coagulation factor VIII 90.1 1.6 5.3E-05 39.6 9.8 43 430-472 115-159 (159)
123 2ahx_A P180ERBB4, receptor tyr 89.6 0.3 1E-05 54.7 5.4 42 5-50 492-536 (617)
124 2kpn_A Bacillolysin; solution 89.3 0.27 9.1E-06 41.3 3.6 58 575-642 8-69 (103)
125 4deq_A Neuropilin-1, vascular 88.5 2.1 7.3E-05 41.0 9.9 134 319-474 9-159 (218)
126 2hr7_A Insulin receptor; hormo 88.3 0.36 1.2E-05 52.3 4.8 13 61-73 236-248 (486)
127 1md8_A C1R complement serine p 88.2 0.86 2.9E-05 46.7 7.3 72 180-264 1-81 (329)
128 1m6b_A C-ER, receptor protein- 86.7 0.24 8.3E-06 55.4 2.2 24 11-34 239-262 (621)
129 2kpn_A Bacillolysin; solution 86.5 0.92 3.1E-05 38.0 5.2 74 491-575 8-86 (103)
130 3bn6_A Lactadherin; anticoagul 85.2 4.2 0.00014 36.6 9.5 31 440-470 128-158 (158)
131 2ahx_A P180ERBB4, receptor tyr 85.0 0.27 9.4E-06 55.0 1.6 22 61-82 279-302 (617)
132 2e4u_A Metabotropic glutamate 83.7 0.36 1.2E-05 53.2 1.8 52 43-100 487-539 (555)
133 2gy5_A Angiopoietin-1 receptor 83.2 2.7 9.3E-05 44.5 8.3 8 142-149 307-314 (423)
134 2e4u_A Metabotropic glutamate 80.9 0.75 2.6E-05 50.6 3.1 15 66-80 525-539 (555)
135 1yy9_A Epidermal growth factor 80.2 1.3 4.5E-05 49.5 4.7 10 61-70 235-244 (624)
136 1czt_A Protein (coagulation fa 79.8 8 0.00027 34.8 9.2 42 430-471 115-158 (160)
137 1n8y_C Protooncoprotein; tyros 76.3 1.2 4.2E-05 49.5 3.0 37 6-49 504-546 (608)
138 2wuh_A Discoidin domain recept 76.1 8.5 0.00029 35.4 8.3 83 388-472 84-175 (178)
139 2dtg_E Insulin receptor; IR ec 76.0 1.3 4.4E-05 51.9 3.2 11 594-604 806-816 (897)
140 3i2t_A Epidermal growth factor 75.7 2.4 8.3E-05 46.4 5.1 11 141-151 285-295 (551)
141 2hr7_A Insulin receptor; hormo 75.1 2.2 7.4E-05 46.2 4.4 8 81-88 240-247 (486)
142 4aqt_A Laminin subunit gamma-1 74.1 2.2 7.5E-05 44.4 4.0 82 10-104 274-369 (375)
143 1igr_A Insulin-like growth fac 68.3 3.4 0.00012 44.4 4.0 12 61-72 272-283 (478)
144 2y38_A Laminin subunit alpha-5 66.8 4.7 0.00016 42.2 4.6 33 9-46 288-326 (403)
145 1igr_A Insulin-like growth fac 66.8 3.1 0.00011 44.7 3.4 13 41-53 272-285 (478)
146 2gy5_A Angiopoietin-1 receptor 65.0 8.3 0.00028 40.8 6.2 51 27-88 188-239 (423)
147 4gz9_A Neuropilin-1, A5 protei 64.1 26 0.00088 38.6 10.3 134 319-474 260-410 (577)
148 2qqj_A Neuropilin-2; VEGF rece 61.3 32 0.0011 34.6 9.7 33 441-473 128-160 (325)
149 2y38_A Laminin subunit alpha-5 59.3 5.3 0.00018 41.8 3.3 82 23-120 286-393 (403)
150 4aqs_A Laminin subunit beta-1; 59.0 7.3 0.00025 42.4 4.6 24 23-46 418-442 (525)
151 4ag4_A Epithelial discoidin do 56.7 32 0.0011 35.2 8.6 133 319-473 9-163 (351)
152 1yo8_A Thrombospondin-2; EGF, 56.6 16 0.00056 40.5 6.8 16 139-154 128-143 (634)
153 2bou_A EGF-like module contain 54.4 13 0.00044 32.5 4.6 15 139-153 118-132 (143)
154 1yo8_A Thrombospondin-2; EGF, 53.6 5.9 0.0002 44.1 2.7 14 95-109 127-140 (634)
155 1emn_A Fibrillin; extracellula 49.7 9.2 0.00031 30.0 2.6 54 95-152 24-77 (82)
156 2qqi_A Neuropilin-1; VEGF rece 47.4 69 0.0023 32.0 9.4 33 441-473 127-159 (318)
157 2vj2_A Jagged-1; signalling, p 46.7 25 0.00085 31.7 5.4 10 140-149 154-163 (169)
158 3zyj_B Netrin-G1; cell adhesio 46.1 8 0.00027 40.7 2.1 10 24-33 325-334 (426)
159 1lmj_A Fibrillin 1; EGF, calci 46.1 22 0.00075 28.0 4.3 12 22-34 24-35 (86)
160 2dtg_E Insulin receptor; IR ec 44.1 10 0.00034 44.3 2.8 67 9-85 225-307 (897)
161 4aqs_A Laminin subunit beta-1; 43.6 20 0.00068 38.9 4.9 12 141-154 461-472 (525)
162 1md8_A C1R complement serine p 42.7 33 0.0011 34.6 6.1 48 259-310 1-57 (329)
163 2xtt_A Protease inhibitor SGPI 42.2 17 0.00059 23.9 2.5 31 143-182 3-33 (36)
164 2wn3_A Discoidin-1 subunit A; 41.7 58 0.002 31.6 7.5 81 389-474 72-157 (254)
165 3pe9_A Fibronectin(III)-like m 41.1 65 0.0022 26.2 6.5 28 548-575 61-89 (98)
166 4aqt_A Laminin subunit gamma-1 40.1 23 0.0008 36.6 4.5 69 27-110 275-359 (375)
167 3ojy_B Complement component C8 39.9 18 0.0006 39.5 3.7 83 33-135 442-528 (537)
168 3k6s_B Integrin beta-2; cell r 38.6 11 0.00039 42.3 1.9 10 98-108 539-548 (687)
169 3pdd_A Glycoside hydrolase, fa 36.4 58 0.002 30.0 6.2 60 513-575 110-181 (190)
170 4ers_A GL-R, glucagon receptor 33.0 39 0.0013 27.6 3.8 34 212-250 43-81 (96)
171 2yrl_A KIAA1837 protein; PKD d 32.7 73 0.0025 26.0 5.6 31 548-578 69-99 (102)
172 2ygq_A WIF-1, WNT inhibitory f 30.3 1.2E+02 0.0039 30.5 7.8 54 11-73 154-208 (324)
173 3zyj_B Netrin-G1; cell adhesio 29.8 19 0.00066 37.8 1.8 22 23-50 313-334 (426)
174 3qc5_X Platelet binding protei 29.2 1.1E+02 0.0038 30.7 7.0 35 488-529 153-187 (360)
175 3q2v_A Cadherin-1; cell adhesi 28.8 2.6E+02 0.0089 30.1 10.9 86 550-642 296-415 (550)
176 2vm9_A Discoidin-2, discoidin 27.9 1.4E+02 0.0046 28.9 7.6 82 388-474 72-158 (257)
177 2c4x_A Endoglucanase, ctcel9D- 26.3 1.1E+02 0.0037 29.8 6.4 30 548-577 69-98 (260)
178 3n7s_A Calcitonin gene-related 24.7 51 0.0017 27.8 3.2 33 213-250 60-95 (115)
179 4gz9_A Neuropilin-1, A5 protei 24.1 1.5E+02 0.0051 32.3 7.9 86 387-474 475-569 (577)
180 2l27_A Seven transmembrane hel 23.2 27 0.00093 27.7 1.2 33 213-250 34-71 (84)
181 3c5t_A Glucagon-like peptide 1 21.4 89 0.0031 26.6 4.2 33 212-249 51-88 (122)
182 2x57_A Vasoactive intestinal p 21.1 73 0.0025 26.9 3.5 35 212-252 62-100 (116)
183 2qkh_A Glucose-dependent insul 20.2 50 0.0017 28.7 2.3 33 212-249 70-107 (135)
No 1
>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=344.66 Aligned_cols=416 Identities=18% Similarity=0.324 Sum_probs=281.4
Q ss_pred CCCCCCCCCCCCccceecCC-CCee----eEEeCCCC------eeccCCcCCCCceEeccc----CCeeecCCCCc----
Q psy833 116 RNFCRVPTPGAEYGNFLDTR-YQSS----FFFGCQDT------FKLAGQTDKNDNVVRCQA----NGIWDFGDLRC---- 176 (642)
Q Consensus 116 ~~~C~~~~~~p~nG~~~~~~-~~~~----~~~~C~~G------y~l~g~~~~~~~~~~C~~----~G~Ws~~~p~C---- 176 (642)
...|+ +++.+.||.+.... ..+. ..|+|+.| |.|.|.. +++|+. +|.|+.+.|.|
T Consensus 253 ~i~C~-~p~~i~nG~~~~~~~~~~~~g~~v~y~C~~g~~~~~~y~l~G~~-----~~~C~~~~~~~g~Ws~~~P~C~~~~ 326 (951)
T 2gsx_A 253 EIFCP-SPPPILNGRHIGNSLANVSYGSIVTYTCDPDPEEGVNFILIGES-----TLRCTVDSQKTGTWSGPAPRCELST 326 (951)
T ss_pred cCcCC-CCCCcCCCceeccccCcccCCCEEEEEcCCCCCCcceEEecCCc-----eEEeccCCCCCCcCCCCCCcccccc
Confidence 35687 56789999988753 2232 39999999 9999999 999999 89999999999
Q ss_pred cCCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCcee
Q psy833 177 EGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCE 256 (642)
Q Consensus 177 ~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~ 256 (642)
+.+.|+.|..+.++.+.. ....|.+|++|+|+|++||.|.|+.. ++|+++|+|++..|.|+
T Consensus 327 ~~~~C~~P~~~~~~~~~~--------------~~~~y~~g~~v~f~C~~Gy~l~G~~~-----~~C~~~G~Ws~~~P~C~ 387 (951)
T 2gsx_A 327 SAVQCPHPQILRGRMVSG--------------QKDRYTYNDTVIFACMFGFTLKGSKQ-----IRCNAQGTWEPSAPVCE 387 (951)
T ss_pred cceecCCCCCCCCcEeec--------------CCCccccCCEEEEEcCCCCEEcCCCc-----eEECCCCcCCCCCcccc
Confidence 778999998888876221 11458999999999999999999864 89999999999999999
Q ss_pred cCcCCCCCCCCCcEEEccCCccccccCCCCCEEEEEccCCCeEEeCCCceeeCC-------CCceEEecCCCCCCccCCC
Q psy833 257 GPVCSDPGRPVDGYQVATSYEQVRYDDEQGSEVQFGCNKPGYILINPRPITCVR-------EPECKIIKPLGLASGRIPD 329 (642)
Q Consensus 257 ~~~C~~p~~~~~g~~~~~~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~~-------~P~C~~v~p~~~~~g~~~~ 329 (642)
++ |+.|+.+.||.+.......|. +|++|+|+|+ +||.|.|+..++|+. .|.|+++.++.+.++.+..
T Consensus 388 ~~-C~~p~~~~ng~~~~~~~~~~~----~g~~v~~~C~-~Gy~l~G~~~~~C~~~G~Ws~~~p~C~~~~C~~~~~~~~~~ 461 (951)
T 2gsx_A 388 KE-CQAPPNILNGQKEDRHMVRFD----PGTSIKYSCN-PGYVLVGEESIQCTSEGVWTPPVPQCKVAACEATGRQLLTK 461 (951)
T ss_pred cc-cCCCCcccCCeEecCCCcccC----CCCEEEEEcC-CCCEECCCCCeEECCCCcCCCCCCccceeeCCCCCcccccC
Confidence 97 999999999998864322222 7999999999 999999999999996 4899988865555443321
Q ss_pred ------CCCCccCCCcCceecccccCCCCCCCcccccccccceeeeccCC-cccCccce--eEEee--EEeeceecc---
Q psy833 330 ------SSINATSESPYLVRVNACSVPLIPGPRVQELLAEKNVRLFNVLR-TLANMEVY--VYRLA--ILVKGVVTN--- 395 (642)
Q Consensus 330 ------~~~~~~~~~~~y~~~~~~~~~~~~g~~~~~~l~g~~~~~c~~~g-Ws~~~p~c--v~~~~--~~~~g~~~~--- 395 (642)
.....++|+.|| .|.|...++|+.+| |++..|.| +.|.. .+.+|....
T Consensus 462 ~~~~~~~~~~~~~C~~Gy------------------~l~G~~~~~C~~~g~Ws~~~p~C~~i~C~~pp~i~nG~~~~~~~ 523 (951)
T 2gsx_A 462 PQHQFVRPDVNSSCGEGY------------------KLSGSVYQECQGTIPWFMEIRLCKEITCPPPPVIYNGAHTGSSL 523 (951)
T ss_pred CCCceecCeEEEEcCCCc------------------EEcCCCeeEccCcccccCCCceecceeCCCCCCCCCCeEeCCCC
Confidence 123567899999 88999999999999 99999999 67752 112232211
Q ss_pred --cccccceeeeeeEeeccc----cceEEeeccceeccC----CCCCccCcc--c------ccCc---c-------ceee
Q psy833 396 --DIVGRPTEIRFFYKQAES----ENFVVYFPNFNLTMR----DPGNYGELA--M------ITLP---K-------FVQA 447 (642)
Q Consensus 396 --~~~g~~~~~~~~~~~~~~----~~~~~~~p~~~~~~~----~~g~~~~~~--~------~~~~---~-------~~~~ 447 (642)
..+|.. +.|..... ..|.. .-.-.++|. .+|.|+... . +..+ . ....
T Consensus 524 ~~~~~g~~----v~y~C~~g~~~~~~y~l-~G~~~~~C~~~~~~~G~Ws~~~P~C~~~~~~~~C~~p~~~~~~~~~~~~~ 598 (951)
T 2gsx_A 524 EDFPYGTT----VTYTCNPGPERGVEFSL-IGESTIRCTSNDQERGTWSGPAPLCKLSLLAVQCSHVHIANGYKISGKEA 598 (951)
T ss_pred CccccCCE----EEEEcCCCCCCCceEEE-ecCceEEecccCCCCccCcCCCceeecCCCccCCcCCCCCCCceEeCCCC
Confidence 111111 22222211 00222 122346776 789998642 1 1111 0 1124
Q ss_pred eeEEeeEEEEEeCcccceeecc-----cCCCCCcCcccccCCCCCCcCCCCCeeecCCCCceEEEeCCCCeeeEEEcCCc
Q psy833 448 RFVILGIVSYMDNACLKFELMG-----CEEPKVEPLLGYDYGYSPCVDNEPPVFQNCPQQPIIVRKGPNGIEPVNITEPV 522 (642)
Q Consensus 448 ~~~~~~~v~~~C~~~~gf~l~G-----C~~~g~~~~~~Ws~~~P~C~d~~pP~~~~CP~~~i~~~~~~~~~~~v~~~~p~ 522 (642)
.|.+|++|+|+|++ ||+|.| |+++| +|++..|+|+.+ .|+.....+ ++ +
T Consensus 599 ~~~~g~~v~~~C~~--Gy~l~G~~~~~C~~~g-----~Ws~~~P~C~~~------~C~~~~~~~----~~-----~---- 652 (951)
T 2gsx_A 599 PYFYNDTVTFKCYS--GFTLKGSSQIRCKADN-----TWDPEIPVCEKE------TCQHVRQSL----QE-----L---- 652 (951)
T ss_pred cccCCCEEEEEeCC--CCEEcCCCceEECCCC-----CCCCCCCcceec------ccCCCCCCc----CC-----C----
Confidence 68899999999999 999999 99999 999999999975 455431100 00 0
Q ss_pred eecCCCceeEEEEccCCCCCCceeecceEEEEEEEeCCCCEEEEEEEEEEecCCCC---eEeCCCCcEEEccCCCceeEE
Q psy833 523 AVDNSGSIARLEIKPQSFKTPMITFHDMAVKYIAYDFDGNVAICEINITVVDETPP---LLSCPQSYIIELVDKQDSYVM 599 (642)
Q Consensus 523 ~~dnsg~~~~~~~~~~~~~~~~~~~G~~~Vtyta~D~~Gn~a~C~f~v~v~d~~pP---~i~Cp~~~~i~~~~~~~~~~v 599 (642)
..|+.+.+. .....+.+.+.|...+++.. +.+|. ++...| .|.|+.++.+.++...
T Consensus 653 ---~~g~~~~~~--~~~C~~Gy~l~g~~~~~C~~-~~~g~----------Ws~~~p~C~~i~C~~p~~i~nG~~~----- 711 (951)
T 2gsx_A 653 ---PAGSRVELV--NTSCQDGYQLTGHAYQMCQD-AENGI----------WFKKIPLCKVIHCHPPPVIVNGKHT----- 711 (951)
T ss_pred ---CcCCEEEEE--ecCCCCCcEECCCccceeec-CCCce----------eCCCCceecceeCCCCCcCCCCeEe-----
Confidence 012222222 01122334455666666551 12232 233444 3459998888766331
Q ss_pred EecCCCcceeeecCCCCeEEEeCCCCccccCCCceEEEEEE
Q psy833 600 NFNETRRRVNVSDASGEVTVTFSPDRATILLGDFENVTVTA 640 (642)
Q Consensus 600 ~w~~p~~~~~~~Dnsg~~~v~~~~~~g~~~~G~~~~v~~ta 640 (642)
-.. ..+..-...|++..++|...+|.. .++.++
T Consensus 712 -~~~------~~~~~~g~~v~y~C~~Gy~l~G~~-~~~C~~ 744 (951)
T 2gsx_A 712 -GMM------AENFLYGNEVSYECDQGFYLLGEK-KLQCRS 744 (951)
T ss_pred -ccc------CCCcccCCEEEEEeCCCceeCCCc-ceEEcc
Confidence 000 001111245777777887788887 777765
No 2
>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR, CCP, immune system; NMR {Rattus norvegicus}
Probab=100.00 E-value=9e-35 Score=304.68 Aligned_cols=269 Identities=19% Similarity=0.371 Sum_probs=210.7
Q ss_pred CCCCCCCCCCCccceecCC--CCee----eEEeCCCCeeccCCcCCCCceEecccCCeeecCCCCccCCcCCCCCCCCCc
Q psy833 117 NFCRVPTPGAEYGNFLDTR--YQSS----FFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDG 190 (642)
Q Consensus 117 ~~C~~~~~~p~nG~~~~~~--~~~~----~~~~C~~Gy~l~g~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~~g 190 (642)
..|. .++.+.|+.+.... ..|. ..|+|++|| +.+.. .++|+.+|+|+...|.|+++.|+.|+.+.||
T Consensus 3 ~~C~-~Pp~~~~~~~~~~~~~~~~~~g~~~~y~C~~Gy-~~~~~-----~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG 75 (320)
T 1ntj_A 3 GQCP-APPLFPYAKPINPTDESTFPVGTSLKYECRPGY-IKRQF-----SITCEVNSVWTSPQDVCIRKQCETPLDPQNG 75 (320)
T ss_pred CcCc-CCCcCCcceeccccccccCCCCCEEEEEcCCCC-CCCCC-----eEEECCCCEECCCCCccccccCcCCCCCCCC
Confidence 4576 45667777765321 1222 399999999 56777 8999999999999999999999999999999
Q ss_pred eeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCC---eecCCCCceecCcCCCCCCCC
Q psy833 191 YQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANG---IWDFGDLRCEGPVCSDPGRPV 267 (642)
Q Consensus 191 ~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G---~Ws~~~P~C~~~~C~~p~~~~ 267 (642)
.+. +. ..+.+|++|+|+|++||+|.|.+. ++|+.+| +|++..|.|+.+.|+.|+.+.
T Consensus 76 ~~~------~~---------~~~~~g~~~~y~C~~Gy~l~G~~~-----~~C~~~g~~~~Ws~~~P~C~~~~C~~p~~~~ 135 (320)
T 1ntj_A 76 IVH------VN---------TDIRFGSSITYTCNEGYRLIGSSS-----AMCIISDQSVAWDAEAPICESIPCEIPPSIP 135 (320)
T ss_pred EEE------CC---------CCcccCCEEEEEcCCCCEECCCCc-----eEEEeCCCCeeeCCCCCcCcCCCCCCCCCCC
Confidence 832 21 347899999999999999999865 8999988 899999999999999999999
Q ss_pred CcEEEccCCccccccCCCCCEEEEEccCCC------eEEeCCCceeeCC-----------CCceEE-ec--CCCCCCccC
Q psy833 268 DGYQVATSYEQVRYDDEQGSEVQFGCNKPG------YILINPRPITCVR-----------EPECKI-IK--PLGLASGRI 327 (642)
Q Consensus 268 ~g~~~~~~~~~~~~~~~~gs~~~~~C~~~G------y~l~G~~~~~C~~-----------~P~C~~-v~--p~~~~~g~~ 327 (642)
||.+.......+. +|++|+|+|+ +| |.|+|...++|+. .|.|++ +. ++.+.||.+
T Consensus 136 nG~~~~~~~~~~~----~g~~v~y~C~-~G~~~~~~y~l~G~~~~~C~~~~~~~G~Ws~~~P~C~~~~~C~~p~~~ng~~ 210 (320)
T 1ntj_A 136 NGDFFSPNREDFH----YGMVVTYQCN-TDARGKKLFNLVGEPSIHCTSIDGQVGVWSGPPPQCIELNKCTPPHVENAVI 210 (320)
T ss_pred CCcEecCCCCccc----cCCEEEEECC-CCCCCcceEEEeCCCceEEecCCCCCCEECCCCccccccCCCCCCCCCCCeE
Confidence 9988753222222 9999999999 99 9999999999985 399997 44 456778765
Q ss_pred CC--------CCCCccCCCcCceecccccCCCCCCCcccccccccceeeeccCC-cccCcccee---EEeeEEeeceecc
Q psy833 328 PD--------SSINATSESPYLVRVNACSVPLIPGPRVQELLAEKNVRLFNVLR-TLANMEVYV---YRLAILVKGVVTN 395 (642)
Q Consensus 328 ~~--------~~~~~~~~~~~y~~~~~~~~~~~~g~~~~~~l~g~~~~~c~~~g-Ws~~~p~cv---~~~~~~~~g~~~~ 395 (642)
.. ...+.+.|++|| .|.|...++|..+| |++..|.|+ .|... +..
T Consensus 211 ~~~~~~~~~~g~~v~f~C~~Gy------------------~l~G~~~~~C~~~g~Ws~~~P~C~~~~~C~~p-----~~~ 267 (320)
T 1ntj_A 211 VSKNKSLFSLRDMVEFRCQDGF------------------MMKGDSSVYCRSLNRWEPQLPSCFKVKSCGAF-----LGE 267 (320)
T ss_pred eCCCCCcccCCCEEEEECCCCC------------------eECCCCCcEECCCCeECCCCCeeEcccccCCC-----CCC
Confidence 42 233677899999 78999999999999 999999993 35210 000
Q ss_pred cccccceeeeeeEeeccccceEEeeccceeccCCCCCccCcccccCccceeeeeEEeeEEEEEeCcccceeecc-----c
Q psy833 396 DIVGRPTEIRFFYKQAESENFVVYFPNFNLTMRDPGNYGELAMITLPKFVQARFVILGIVSYMDNACLKFELMG-----C 470 (642)
Q Consensus 396 ~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~C~~~~gf~l~G-----C 470 (642)
. .+|... ....|.+|++|+|+|++ ||+|.| |
T Consensus 268 ~--------------------------------~ng~~~----------~~~~~~~g~~v~~~C~~--Gy~l~G~~~~~C 303 (320)
T 1ntj_A 268 L--------------------------------PNGHVF----------VPQNLQLGAKVTFVCNT--GYQLKGNSSSHC 303 (320)
T ss_pred C--------------------------------CCCeEe----------cCCCcccCCEEEEEcCC--CCEECCCCcCEe
Confidence 0 112110 11257789999999999 999999 9
Q ss_pred CCCCCcCccc---ccCCCCCCc
Q psy833 471 EEPKVEPLLG---YDYGYSPCV 489 (642)
Q Consensus 471 ~~~g~~~~~~---Ws~~~P~C~ 489 (642)
+++| + |++..|+|+
T Consensus 304 ~~~G-----~~~~Ws~~~P~C~ 320 (320)
T 1ntj_A 304 VLDG-----VESIWNSSVPVCE 320 (320)
T ss_pred eCCC-----CcCccCCCCCccC
Confidence 9998 6 999999995
No 3
>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=1e-32 Score=328.75 Aligned_cols=361 Identities=18% Similarity=0.324 Sum_probs=251.6
Q ss_pred EEeCCCCeeccCCcCCCCceEecccCCeeecCCCCccCCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEE
Q psy833 141 FFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFF 220 (642)
Q Consensus 141 ~~~C~~Gy~l~g~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~ 220 (642)
.|.|++||+|.|.. .++|+.+|.|+...|.|+.+.|++|+.+.||.+.. .. ...|.+|++|+
T Consensus 472 ~~~C~~Gy~l~G~~-----~~~C~~~g~Ws~~~p~C~~i~C~~pp~i~nG~~~~------~~-------~~~~~~g~~v~ 533 (951)
T 2gsx_A 472 NSSCGEGYKLSGSV-----YQECQGTIPWFMEIRLCKEITCPPPPVIYNGAHTG------SS-------LEDFPYGTTVT 533 (951)
T ss_pred EEEcCCCcEEcCCC-----eeEccCcccccCCCceecceeCCCCCCCCCCeEeC------CC-------CCccccCCEEE
Confidence 89999999999999 99999999999999999999999999999998332 10 12489999999
Q ss_pred EEcccC------ccccCCccCCCceEEec----cCCeecCCCCcee----cCcCCCCCCCCCcEEEcc--CCccccccCC
Q psy833 221 FGCQDT------FKLAGQTDKNDNVVRCQ----ANGIWDFGDLRCE----GPVCSDPGRPVDGYQVAT--SYEQVRYDDE 284 (642)
Q Consensus 221 ~~C~~G------y~l~G~~~~~~~~~~C~----~~G~Ws~~~P~C~----~~~C~~p~~~~~g~~~~~--~~~~~~~~~~ 284 (642)
|+|++| |.|.|++. ++|+ ++|+|++..|.|+ .+.|+.|..+.++.+... .+.
T Consensus 534 y~C~~g~~~~~~y~l~G~~~-----~~C~~~~~~~G~Ws~~~P~C~~~~~~~~C~~p~~~~~~~~~~~~~~~~------- 601 (951)
T 2gsx_A 534 YTCNPGPERGVEFSLIGEST-----IRCTSNDQERGTWSGPAPLCKLSLLAVQCSHVHIANGYKISGKEAPYF------- 601 (951)
T ss_pred EEcCCCCCCCceEEEecCce-----EEecccCCCCccCcCCCceeecCCCccCCcCCCCCCCceEeCCCCccc-------
Confidence 999999 99999975 8999 8999999999996 679999887777766543 233
Q ss_pred CCCEEEEEccCCCeEEeCCCceeeCC-------CCceEEecCCCCCC--ccCCCC---CCCccCCCcCceecccccCCCC
Q psy833 285 QGSEVQFGCNKPGYILINPRPITCVR-------EPECKIIKPLGLAS--GRIPDS---SINATSESPYLVRVNACSVPLI 352 (642)
Q Consensus 285 ~gs~~~~~C~~~Gy~l~G~~~~~C~~-------~P~C~~v~p~~~~~--g~~~~~---~~~~~~~~~~y~~~~~~~~~~~ 352 (642)
+|++|+|+|+ +||.|.|+..++|++ .|.|+++.++.+.. ..++.. .+..++|++||
T Consensus 602 ~g~~v~~~C~-~Gy~l~G~~~~~C~~~g~Ws~~~P~C~~~~C~~~~~~~~~~~~g~~~~~~~~~C~~Gy----------- 669 (951)
T 2gsx_A 602 YNDTVTFKCY-SGFTLKGSSQIRCKADNTWDPEIPVCEKETCQHVRQSLQELPAGSRVELVNTSCQDGY----------- 669 (951)
T ss_pred CCCEEEEEeC-CCCEEcCCCceEECCCCCCCCCCCcceecccCCCCCCcCCCCcCCEEEEEecCCCCCc-----------
Confidence 8999999999 999999999999996 48999887433221 112222 23346799999
Q ss_pred CCCcccccccccceeeec--cCC-cccCccce--eEEeeEEeeceecccccccceeeeeeEeeccccceEEeeccceecc
Q psy833 353 PGPRVQELLAEKNVRLFN--VLR-TLANMEVY--VYRLAILVKGVVTNDIVGRPTEIRFFYKQAESENFVVYFPNFNLTM 427 (642)
Q Consensus 353 ~g~~~~~~l~g~~~~~c~--~~g-Ws~~~p~c--v~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 427 (642)
.|.|...++|. .+| |++..|.| +.|. .++.+.
T Consensus 670 -------~l~g~~~~~C~~~~~g~Ws~~~p~C~~i~C~------~p~~i~------------------------------ 706 (951)
T 2gsx_A 670 -------QLTGHAYQMCQDAENGIWFKKIPLCKVIHCH------PPPVIV------------------------------ 706 (951)
T ss_pred -------EECCCccceeecCCCceeCCCCceecceeCC------CCCcCC------------------------------
Confidence 78999999999 788 99999999 5562 111111
Q ss_pred CCCCCccCcccccCccceeeeeEEeeEEEEEeCcccceeecc-----cCCC----CCcCcccccCCCCCCcCCCCCeeec
Q psy833 428 RDPGNYGELAMITLPKFVQARFVILGIVSYMDNACLKFELMG-----CEEP----KVEPLLGYDYGYSPCVDNEPPVFQN 498 (642)
Q Consensus 428 ~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~C~~~~gf~l~G-----C~~~----g~~~~~~Ws~~~P~C~d~~pP~~~~ 498 (642)
+|..... ....|.+|++|+|+|++ ||+|.| |+++ | +|++..|+|+...+ . ..
T Consensus 707 --nG~~~~~--------~~~~~~~g~~v~y~C~~--Gy~l~G~~~~~C~~~~~g~g-----~Ws~~~P~C~~~~~-~-~~ 767 (951)
T 2gsx_A 707 --NGKHTGM--------MAENFLYGNEVSYECDQ--GFYLLGEKKLQCRSDSKGHG-----SWSGPSPQCLRSPP-V-TR 767 (951)
T ss_pred --CCeEecc--------cCCCcccCCEEEEEeCC--CceeCCCcceEEccCCCCCC-----cCCCCCCcccccCC-C-cc
Confidence 2222111 12468899999999999 999999 9998 6 99999999986322 2 26
Q ss_pred CCCCceEEEeCCCCeeeEEEcCCceecCCCceeEEEEccCCCCCCceeecceEEEEEEEe-CCCCEEEEEEEEEEecCCC
Q psy833 499 CPQQPIIVRKGPNGIEPVNITEPVAVDNSGSIARLEIKPQSFKTPMITFHDMAVKYIAYD-FDGNVAICEINITVVDETP 577 (642)
Q Consensus 499 CP~~~i~~~~~~~~~~~v~~~~p~~~dnsg~~~~~~~~~~~~~~~~~~~G~~~Vtyta~D-~~Gn~a~C~f~v~v~d~~p 577 (642)
||.. . .+++.... ........|+++.+.+.+ ++.+.|...+++.+.- =++...+|.-.
T Consensus 768 C~~p-~----i~ng~~~~---~~~~~y~~g~~v~~~C~~-----Gy~l~G~~~~~C~~~g~Ws~~~P~C~~~-------- 826 (951)
T 2gsx_A 768 CPNP-E----VKHGYKLN---KTHSAYSHNDIVYVDCNP-----GFIMNGSRVIRCHTDNTWVPGVPTCIKK-------- 826 (951)
T ss_pred CCCC-c----CCCCceec---CCCCccccCCEEEEEcCC-----CcEEeCCceeEEccCCeECCCCceeecc--------
Confidence 8863 1 12332110 001122346667777652 2345577777666520 01112244311
Q ss_pred CeEeCCCCcEEEccCCCceeEEEecCCCcceeeecCCCCeEEEeCCCCccccCCCceEEEEE
Q psy833 578 PLLSCPQSYIIELVDKQDSYVMNFNETRRRVNVSDASGEVTVTFSPDRATILLGDFENVTVT 639 (642)
Q Consensus 578 P~i~Cp~~~~i~~~~~~~~~~v~w~~p~~~~~~~Dnsg~~~v~~~~~~g~~~~G~~~~v~~t 639 (642)
..+.|+.++.+.++.. +... ...-.-...|++..++|..++|.. .++..
T Consensus 827 ~~~~C~~pp~~~ng~~------~~~~------~~~~~~g~~v~y~C~~Gy~l~G~~-~~~C~ 875 (951)
T 2gsx_A 827 AFIGCPPPPKTPNGNH------TGGN------IARFSPGMSILYSCDQGYLLVGEA-LLLCT 875 (951)
T ss_pred cccCCCCCCcCCccee------eCCc------cccccCCCEEEEEcCCCCEECCCC-eeEEC
Confidence 1235888877765422 1100 000011245777777888788887 66664
No 4
>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat, sushi, complement control protein, N glycosylation, multi-domain, membrane adhesion; HET: NAG MAN; 2.70A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A
Probab=100.00 E-value=4.6e-34 Score=298.78 Aligned_cols=275 Identities=18% Similarity=0.287 Sum_probs=211.4
Q ss_pred CCCCCCCCCCCccceecCCCCee----eEEeCCCCeeccC-CcCCCCceEecccCCeeecCCCCccCCcCCCCCCCCCce
Q psy833 117 NFCRVPTPGAEYGNFLDTRYQSS----FFFGCQDTFKLAG-QTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGY 191 (642)
Q Consensus 117 ~~C~~~~~~p~nG~~~~~~~~~~----~~~~C~~Gy~l~g-~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~~g~ 191 (642)
+.|+ .++.+.||.+......|. +.|+|++||.|.| .. .++|+.+|+|+...|.|+++.|+.|+.+.||.
T Consensus 2 ~~C~-~P~~~~ng~~~~~~~~y~~g~~~~y~C~~Gy~l~g~~~-----~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~nG~ 75 (319)
T 1qub_A 2 RTCP-KPDDLPFSTVVPLKTFYEPGEEITYSCKPGYVSRGGMR-----KFICPLTGLWPINTLKCTPRVCPFAGILENGA 75 (319)
T ss_dssp CSEE-CCCCCTTEEEESCCSEECTTCEEEEEECTTEEETTSCE-----EEECCTTSCCCCCCCCEEECBCCCCCCCTTEE
T ss_pred CcCc-CCCCCCCCEEecCCCcccCCCEEEEEECCCCeEcCCCc-----eEEECCCCEECCCCCeECccCCcCCCCCCCcc
Confidence 3576 456788999887544332 3999999999986 55 88999999999999999999999999999998
Q ss_pred eeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceecCcCCCCCCCCCcEE
Q psy833 192 QVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGYQ 271 (642)
Q Consensus 192 ~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~~g~~ 271 (642)
+.. ..+.+|++|+|+|++||.|.|.+. ++|+++|+|++..|.|+.+.|+.|+.+.||.+
T Consensus 76 ~~~----------------~~~~~g~~v~~~C~~Gy~l~G~~~-----~~C~~~G~Ws~~~P~C~~~~C~~p~~~~~g~~ 134 (319)
T 1qub_A 76 VRY----------------TTFEYPNTISFSCNTGFYLNGADS-----AKCTEEGKWSPELPVCAPIICPPPSIPTFATL 134 (319)
T ss_dssp EEC----------------SCSBTTCEEEEEECTTEEEESCSE-----EEECTTSCEESCCCEEEECEECCCCCCTTEEE
T ss_pred Eec----------------CCcccCCEEEEECCCCceeCCCCc-----eEECCCCeECCCCCCCccCcCCCCCCCCCceE
Confidence 321 347899999999999999999864 89999999999999999999999999999998
Q ss_pred EccC---CccccccCCCCCEEEEEccCCCeEEeCCCceeeCC------CCceEEec---CCCCCCccCCC--------CC
Q psy833 272 VATS---YEQVRYDDEQGSEVQFGCNKPGYILINPRPITCVR------EPECKIIK---PLGLASGRIPD--------SS 331 (642)
Q Consensus 272 ~~~~---~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~~------~P~C~~v~---p~~~~~g~~~~--------~~ 331 (642)
.... ...+. +|++|+|+|+ +||.|+|+..++|+. .|.|+++. |+.+.||.+.. ..
T Consensus 135 ~~~~~~~~~~~~----~g~~v~y~C~-~Gy~l~G~~~~~C~~~G~Ws~~P~C~~v~C~~p~~~~nG~~~~~~~~~~~~g~ 209 (319)
T 1qub_A 135 RVYKPSAGNNSL----YRDTAVFECL-PQHAMFGNDTITCTTHGNWTKLPECREVKCPFPSRPDNGFVNYPAKPTLYYKD 209 (319)
T ss_dssp EECCCSBTTBEE----TTCEEEEEEC-TTEEEESCSEEEBCTTSSBSCCCEEEECEECCCCCCTTEEEECCSCSSEETTC
T ss_pred EecccCCCCcee----cCCEEEEEeC-CCceecCCCeEEECCCCeECCCCceeccCCCCCCCCCCCeEecCCCCccccCC
Confidence 7531 11222 9999999999 999999999999985 49999986 45577886532 23
Q ss_pred CCccCCCcCceecccccCCCCCCCcccccccccceeeeccCC-cccCcccee-EEeeEEeeceecccccccceeeeeeEe
Q psy833 332 INATSESPYLVRVNACSVPLIPGPRVQELLAEKNVRLFNVLR-TLANMEVYV-YRLAILVKGVVTNDIVGRPTEIRFFYK 409 (642)
Q Consensus 332 ~~~~~~~~~y~~~~~~~~~~~~g~~~~~~l~g~~~~~c~~~g-Ws~~~p~cv-~~~~~~~~g~~~~~~~g~~~~~~~~~~ 409 (642)
.+.+.|++|| .|.|...++|..+| |++ .|+|+ .|. ++.. .+++
T Consensus 210 ~v~~~C~~Gy------------------~l~G~~~~~C~~~G~Ws~-~P~C~~~C~------~p~~--~~~~-------- 254 (319)
T 1qub_A 210 KATFGCHDGY------------------SLDGPEEIECTKLGNWSA-MPSCKASCK------VPVK--KATV-------- 254 (319)
T ss_dssp EEEEEECTTE------------------EESSCSEEEBCTTSSBSC-CCCEEECBC------CSSS--SCEE--------
T ss_pred EEEEEcCCCC------------------EECCCCCeEECCCCcCCC-CCCccCcCC------CCcc--cccc--------
Confidence 4678899999 88999999999999 998 79993 242 1100 0000
Q ss_pred eccccceEEeeccceeccCCCCCccCcccccCccceeeeeEEeeEEEEEeCcccceeecc------cCCCCCcCcccccC
Q psy833 410 QAESENFVVYFPNFNLTMRDPGNYGELAMITLPKFVQARFVILGIVSYMDNACLKFELMG------CEEPKVEPLLGYDY 483 (642)
Q Consensus 410 ~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~C~~~~gf~l~G------C~~~g~~~~~~Ws~ 483 (642)
. .+|.... +.......|.+|+.|+|+|+. ||++.| |+ +| +|+
T Consensus 255 --------~----------~~g~~~~-----~~~~~~~~~~~g~~v~f~C~~--g~~~~~~~~~~~C~-~G-----~w~- 302 (319)
T 1qub_A 255 --------V----------YQGERVK-----IQEKFKNGMLHGDKVSFFCKN--KEKKCSYTEDAQCI-DG-----TIE- 302 (319)
T ss_dssp --------E----------SSSSEEE-----HHHHTTTCBCTTCEEEEEEEE--TTTTEEEEEEEECB-TT-----BCC-
T ss_pred --------c----------cCCceee-----ccccccCcccCCCEEEEEeCC--CCccccCCcCCEec-CC-----cCc-
Confidence 0 0110000 000012357789999999999 999877 98 68 894
Q ss_pred CCCCCcCC
Q psy833 484 GYSPCVDN 491 (642)
Q Consensus 484 ~~P~C~d~ 491 (642)
.|.|+..
T Consensus 303 -~P~C~~~ 309 (319)
T 1qub_A 303 -VPKCFKE 309 (319)
T ss_dssp -CCTTCCC
T ss_pred -CCcccCC
Confidence 8999854
No 5
>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A
Probab=100.00 E-value=1.9e-32 Score=332.35 Aligned_cols=416 Identities=16% Similarity=0.239 Sum_probs=273.9
Q ss_pred ccccCCCCCeecCCCCCCcccCCCCcccCCCCCCCCCCCCCCCCceeeccCCCCCCCCCCCCCCCCCccceecCCCCeee
Q psy833 61 ECVPVCGYGTYSPTGLVPCLECPRNSYTGEPPVGGHKDCEACPANMFTYQPAAPARNFCRVPTPGAEYGNFLDTRYQSSF 140 (642)
Q Consensus 61 ~C~~~C~~G~y~~~g~~~C~~C~~G~y~~~~p~~g~~~C~~Cp~G~~~~~~~~~s~~~C~~~~~~p~nG~~~~~~~~~~~ 140 (642)
.|.-.|.+||...+. . =+.|..|.|.. .| .|.. ....|. .++.|+||.+.+....+.+
T Consensus 636 ~v~y~C~~Gy~l~G~-~-~~~C~~G~Ws~-~P-----~C~~-------------~~~~C~-~~~~~~nG~~~~~~~~~~~ 693 (1213)
T 1haq_A 636 VVEYYCNPRFLMKGP-N-KIQCVDGEWTT-LP-----VCIV-------------EESTCG-DIPELEHGWAQLSSPPYYY 693 (1213)
T ss_pred EEEEEeCCCceEcCC-C-eEEeCCCeeCC-Cc-----cccc-------------ccCcCC-CCCcCCCCeeccCCCcccC
Confidence 444467777765431 1 13444577764 33 4420 135677 5678999999876444433
Q ss_pred ----EEeCCCCeeccCCcCCCCceEecccCCeeecCCCCccCCc----CCCCCCCCCceeeecc----------ee----
Q psy833 141 ----FFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPV----CSDPGRPVDGYQVATS----------YE---- 198 (642)
Q Consensus 141 ----~~~C~~Gy~l~g~~~~~~~~~~C~~~G~Ws~~~p~C~~~~----C~~p~~~~~g~~~~~~----------~~---- 198 (642)
.|+|+.||.|.|.. .++| .+|+|+ .+|.|+++. |+.|..+ +|.+..+. ..
T Consensus 694 g~~~~~~C~~Gy~l~G~~-----~~~C-~~G~Ws-~~p~C~~~~~~~~C~~p~~~-~g~~~~~~~~~~~~gs~v~y~C~~ 765 (1213)
T 1haq_A 694 GDSVEFNCSESFTMIGHR-----SITC-IHGVWT-QLPQCVAIDKLKKCKSSNLI-ILEEHLKNKKEFDHNSNIRYRCRG 765 (1213)
T ss_pred CCEEEEEeCCCceeCCCC-----eEEC-CCCCcc-CccccccccccccCCCCCcc-CCcccccccccccCCCeEEEEcCC
Confidence 99999999999999 9999 999999 899998876 8766544 22211000 00
Q ss_pred --------------------------eeeeCC-cCCCC----ccccccCcEEEEEcccCccccCCccCCCceEEeccCCe
Q psy833 199 --------------------------QVRYDD-EQYGN----FLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGI 247 (642)
Q Consensus 199 --------------------------~C~~~~-~~~g~----~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~ 247 (642)
.|...+ .+.|. ...|.+|++|+|+|++||+|.|... ++|+ +|+
T Consensus 766 g~~~~~~~C~~G~W~~~p~C~~~~~~~C~~pp~i~ng~~~~~~~~~~~G~~v~y~C~~Gy~l~g~~~-----~~C~-~G~ 839 (1213)
T 1haq_A 766 KEGWIHTVCINGRWDPEVNCSMAQIQLCPPPPQIPNSHNMTTTLNYRDGEKVSVLCQENYLIQEGEE-----ITCK-DGR 839 (1213)
T ss_pred CCcEEEEEeCCCCcCCCCccccccCCcCCCCCCCCCCeecCCCCcccCCCEEEEECCCCceeCCCCe-----eECC-CCC
Confidence 133222 11221 1247899999999999999999864 8999 999
Q ss_pred ecCCCCceec-CcCCCCCCCCCcEEEccCCc--cccccCCCCCEEEEEccCCCeEEeCCCceeeCC-----CCceEEec-
Q psy833 248 WDFGDLRCEG-PVCSDPGRPVDGYQVATSYE--QVRYDDEQGSEVQFGCNKPGYILINPRPITCVR-----EPECKIIK- 318 (642)
Q Consensus 248 Ws~~~P~C~~-~~C~~p~~~~~g~~~~~~~~--~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~~-----~P~C~~v~- 318 (642)
|+. .|.|++ +.|+.|+.+.||.+...... .+. +|++|+|+|+ +||.|.|+..++|+. .|.|+++.
T Consensus 840 Ws~-~p~C~~~~~C~~p~~~~ng~~~~~~~~~~~~~----~gs~v~y~C~-~Gy~l~G~~~~~C~~G~Ws~~p~C~~~~C 913 (1213)
T 1haq_A 840 WQS-IPLCVEKIPCSQPPQIEHGTINSSRSSQESYA----HGTKLSYTCE-GGFRISEENETTCYMGKWSSPPQCEGLPC 913 (1213)
T ss_pred cCC-cceeccCCcCCCCCccCCCEEecccCCCCccc----CCCEEEEECC-CCceECCCcceEECCCcccCCCceeecCC
Confidence 998 999998 69999999999999864211 122 8999999999 999999999999997 49999986
Q ss_pred --CCCCCCccCCC-------CCCCccCCCcCceecccccCCCCCCCcccccccccceeeeccCCcccCccce--eEEeeE
Q psy833 319 --PLGLASGRIPD-------SSINATSESPYLVRVNACSVPLIPGPRVQELLAEKNVRLFNVLRTLANMEVY--VYRLAI 387 (642)
Q Consensus 319 --p~~~~~g~~~~-------~~~~~~~~~~~y~~~~~~~~~~~~g~~~~~~l~g~~~~~c~~~gWs~~~p~c--v~~~~~ 387 (642)
|+.+.||.+.. .....+.|.+|| .|.|...++|..+.|++ .|.| +.|..
T Consensus 914 ~~p~~~~ng~~~~~~~~~~~g~~v~~~C~~Gy------------------~l~G~~~~~C~~~~Ws~-~P~C~~~~C~~- 973 (1213)
T 1haq_A 914 KSPPEISHGVVAHMSDSYQYGEEVTYKCFEGF------------------GIDGPAIAKCLGEKWSH-PPSCIKTDCLS- 973 (1213)
T ss_pred CCCCccCCceEeccCCccccCCEEEEECCCCc------------------eecCCCeeEECCCccCC-CCceecCcCCC-
Confidence 55677887643 233678899999 78999999999866999 8999 44521
Q ss_pred EeeceecccccccceeeeeeEeeccccceEEeeccceeccCCCCCccCcccccCccceeeeeEEeeEEEEEeCcccceee
Q psy833 388 LVKGVVTNDIVGRPTEIRFFYKQAESENFVVYFPNFNLTMRDPGNYGELAMITLPKFVQARFVILGIVSYMDNACLKFEL 467 (642)
Q Consensus 388 ~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~C~~~~gf~l 467 (642)
++.. .+|.... ..+..|.+|++|+|+|++ ||.|
T Consensus 974 -----~p~~--------------------------------~ng~~~~--------~~~~~y~~g~~v~y~C~~--Gy~l 1006 (1213)
T 1haq_A 974 -----LPSF--------------------------------ENAIPMG--------EKKDVYKAGEQVTYTCAT--YYKM 1006 (1213)
T ss_pred -----CCcC--------------------------------CCCEEec--------cCcCCEEcCCEEEEECCC--CCEe
Confidence 0000 0111100 023468899999999999 9999
Q ss_pred cc-----cCCCCCcCcccccCCCCCCcCCCCCeeecCCCCceEEEeCCCCeeeEEEcCCceecCCCceeEEEEccCCCCC
Q psy833 468 MG-----CEEPKVEPLLGYDYGYSPCVDNEPPVFQNCPQQPIIVRKGPNGIEPVNITEPVAVDNSGSIARLEIKPQSFKT 542 (642)
Q Consensus 468 ~G-----C~~~g~~~~~~Ws~~~P~C~d~~pP~~~~CP~~~i~~~~~~~~~~~v~~~~p~~~dnsg~~~~~~~~~~~~~~ 542 (642)
.| |+ +| +|++ .|+|+++ .|+..+ ...|+.+.. ........|+.+.+.+.+
T Consensus 1007 ~G~~~~~C~-~g-----~Ws~-~P~C~~~------~C~~p~----~~~ng~~~~---~~~~~~~~g~~v~~~C~~----- 1061 (1213)
T 1haq_A 1007 DGASNVTCI-NS-----RWTG-RPTCRDT------SCVNPP----TVQNAYIVS---RQMSKYPSGERVRYQCRS----- 1061 (1213)
T ss_pred cCCCccccc-CC-----ccCC-CCccccc------cCCCCc----cccCceEec---cCCCcccCCCEEEEEeCC-----
Confidence 99 99 88 9999 9999875 566541 112332211 011222345566666652
Q ss_pred CceeecceEEEEEEEeCCCCEEEEEEEEEEecCCCCeE-----eCCCCcEEEccCCCceeEEEecCCCcceeeecCCCCe
Q psy833 543 PMITFHDMAVKYIAYDFDGNVAICEINITVVDETPPLL-----SCPQSYIIELVDKQDSYVMNFNETRRRVNVSDASGEV 617 (642)
Q Consensus 543 ~~~~~G~~~Vtyta~D~~Gn~a~C~f~v~v~d~~pP~i-----~Cp~~~~i~~~~~~~~~~v~w~~p~~~~~~~Dnsg~~ 617 (642)
++.|.|...+++. +.+| ..+|+. .|+.+..+.++... ....+ ...-..
T Consensus 1062 gy~l~G~~~~~C~-------------~G~W--~~~p~C~~~~~~C~~p~~~~nG~~~-----~~~~~-------~~~~g~ 1114 (1213)
T 1haq_A 1062 PYEMFGDEEVMCL-------------NGNW--TEPPQCKDSTGKCGPPPPIDNGDIT-----SFPLS-------VYAPAS 1114 (1213)
T ss_pred CCcccCCceeEcC-------------CCCc--CCCceeECCCCCCCCCCCcCCCeee-----cCCcc-------ccCCCC
Confidence 2234566666554 3333 233322 38887766654221 00111 111134
Q ss_pred EEEeCCCCccccCCCceEEEE
Q psy833 618 TVTFSPDRATILLGDFENVTV 638 (642)
Q Consensus 618 ~v~~~~~~g~~~~G~~~~v~~ 638 (642)
.|++..++|....|.. .++.
T Consensus 1115 ~v~y~C~~gy~l~G~~-~~~C 1134 (1213)
T 1haq_A 1115 SVEYQCQNLYQLEGNK-RITC 1134 (1213)
T ss_pred EEEEECCCCCEECCCC-eeEc
Confidence 5777777777777776 6654
No 6
>2c8i_E CD55, complement decay-accelerating factor; picornavirus, DAF, virus-receptor complex, antigen, blood group antigen, complement pathway, GPI-anchor; 14.00A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1
Probab=100.00 E-value=5e-33 Score=290.88 Aligned_cols=272 Identities=18% Similarity=0.273 Sum_probs=209.5
Q ss_pred CCCCCCCCCCccceecCCC-Ce----eeEEeCCCCeec-cCC-cCCCCceEecccCCeeecCCCCccC-CcCCCCCCCCC
Q psy833 118 FCRVPTPGAEYGNFLDTRY-QS----SFFFGCQDTFKL-AGQ-TDKNDNVVRCQANGIWDFGDLRCEG-PVCSDPGRPVD 189 (642)
Q Consensus 118 ~C~~~~~~p~nG~~~~~~~-~~----~~~~~C~~Gy~l-~g~-~~~~~~~~~C~~~G~Ws~~~p~C~~-~~C~~p~~~~~ 189 (642)
.|+ +++.++||.+..... .| .+.|+|+.||.| .|. . .++|+.+|+|+...|.|++ +.|+.|+.+.|
T Consensus 2 ~C~-~Pp~i~ng~~~~~~~~~~~~g~~v~y~C~~Gy~l~~G~~~-----~~~C~~~g~Ws~~~p~C~~~~~C~~pp~~~n 75 (316)
T 2c8i_E 2 DCG-LPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKD-----SVICLKGSQWSDIEEFCNRSQDCGLPPDVPN 75 (316)
T ss_pred CCC-CCCCCCCCccccCCCceecCCCEEEEEcCCCcEeccCCcc-----eEEecCCCcCCCCCcccccCCcCCCCCCCCC
Confidence 577 567889998764422 22 238999999998 575 6 8999999999999999985 68999999999
Q ss_pred ceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCcccc-CCccCCCceEEeccCCeecCCCCceecCcCCCCCCCCC
Q psy833 190 GYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLA-GQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVD 268 (642)
Q Consensus 190 g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~-G~~~~~~~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~~ 268 (642)
|.++.. ....|.+|++|+|+|++||.|. |... .++|+++|+|+...|.|+. .|+.|+.+.|
T Consensus 76 g~~~~~-------------~~~~~~~g~~v~y~C~~Gy~~~~G~~~----~~~C~~~G~Ws~~~p~C~~-~C~~p~~~~~ 137 (316)
T 2c8i_E 76 AQPALE-------------GRTSFPEDTVITYKCEESFVKIPGEKD----SVICLKGSQWSDIEEFCNR-SCEVPTRLNS 137 (316)
T ss_pred CEEcCC-------------CCcccCCCCEEEEEeCCCCcccCCCCC----eEEECCCCcCCCCCCcccc-CCCCcccccc
Confidence 973321 1145789999999999999987 7532 4899999999999999985 8999999999
Q ss_pred cEEEcc--CCccccccCCCCCEEEEEccCCCeEEeC--CCceeeCC-------CCceEEec---CCCCCCccCCC-----
Q psy833 269 GYQVAT--SYEQVRYDDEQGSEVQFGCNKPGYILIN--PRPITCVR-------EPECKIIK---PLGLASGRIPD----- 329 (642)
Q Consensus 269 g~~~~~--~~~~~~~~~~~gs~~~~~C~~~Gy~l~G--~~~~~C~~-------~P~C~~v~---p~~~~~g~~~~----- 329 (642)
|.+... ....+. +|++|+|+|+ +||+|.| +..++|+. .|.|+++. |+.+.||.+..
T Consensus 138 g~~~~~~~~~~~~~----~g~~~~y~C~-~Gy~l~g~~~~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~~~~~ 212 (316)
T 2c8i_E 138 ASLKQPYITQNYFP----VGTVVEYECR-PGYRREPSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGGIL 212 (316)
T ss_pred ceeecccccCCccC----CCCEEEEEcC-CCceECCCCCceEEECCCCcCCCCCCceeeeeCcCCCCcCCCEEEcCCCce
Confidence 987642 111122 8999999999 9999987 67899986 38999987 45677887642
Q ss_pred -CCCCccCCCcCceecccccCCCCCCCcccccccccceeeeccCC----cccCccce--eEEeeEEeeceecccccccce
Q psy833 330 -SSINATSESPYLVRVNACSVPLIPGPRVQELLAEKNVRLFNVLR----TLANMEVY--VYRLAILVKGVVTNDIVGRPT 402 (642)
Q Consensus 330 -~~~~~~~~~~~y~~~~~~~~~~~~g~~~~~~l~g~~~~~c~~~g----Ws~~~p~c--v~~~~~~~~g~~~~~~~g~~~ 402 (642)
.....+.|++|| .|.|...++|..+| |++..|.| +.|.. ++..
T Consensus 213 ~g~~~~~~C~~Gy------------------~l~G~~~~~C~~~g~~~~Ws~~~P~C~~i~C~~------p~~~------ 262 (316)
T 2c8i_E 213 FGATISFSCNTGY------------------KLFGSTSSFCLISGSSVQWSDPLPECREIYCPA------PPQI------ 262 (316)
T ss_pred eCCEEEEEeCCcc------------------eECCCccEEEecCCCcccccCCCCccccccCCC------CCcc------
Confidence 233678899999 78999999999765 99999999 55631 1111
Q ss_pred eeeeeEeeccccceEEeeccceeccCCCCCccCcccccCccceeeeeEEeeEEEEEeCcccceeecc-----cCC---CC
Q psy833 403 EIRFFYKQAESENFVVYFPNFNLTMRDPGNYGELAMITLPKFVQARFVILGIVSYMDNACLKFELMG-----CEE---PK 474 (642)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~C~~~~gf~l~G-----C~~---~g 474 (642)
++|.... .+..|.+|++|+|+|++ ||+|.| |++ +|
T Consensus 263 --------------------------~nG~~~~---------~~~~~~~g~~v~~~C~~--gy~l~G~~~~~C~~~~~~g 305 (316)
T 2c8i_E 263 --------------------------DNGIIQG---------ERDHYGYRQSVTYACNK--GFTMIGEHSIYCTVNNDEG 305 (316)
T ss_pred --------------------------CcceEec---------CCCcccCCCEEEEEcCC--CCeEcCCCceEeecCCCCC
Confidence 1222111 13468899999999999 999999 996 46
Q ss_pred CcCcccccCCCCCCcC
Q psy833 475 VEPLLGYDYGYSPCVD 490 (642)
Q Consensus 475 ~~~~~~Ws~~~P~C~d 490 (642)
+|++.+|+|+.
T Consensus 306 -----~Ws~~~P~C~~ 316 (316)
T 2c8i_E 306 -----EWSGPPPECRG 316 (316)
T ss_pred -----eECCCCCeeCC
Confidence 99999999973
No 7
>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens}
Probab=100.00 E-value=1.2e-31 Score=337.82 Aligned_cols=323 Identities=18% Similarity=0.320 Sum_probs=238.9
Q ss_pred eEEeCCCCeeccCCcCCCCceEecccCCeeecCCCCccCCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEE
Q psy833 140 FFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSF 219 (642)
Q Consensus 140 ~~~~C~~Gy~l~g~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~ 219 (642)
+.|+|++||+ .|.. .++|+++|+|+.+.|.|+++.|+.|+.+.||.+... ..+.+|++|
T Consensus 478 v~y~C~~Gy~-~g~~-----~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~v~~~---------------~~~~~g~~v 536 (1931)
T 2q7z_A 478 LKYECRPEYY-GRPF-----SITCLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHVI---------------TDIQVGSRI 536 (1931)
T ss_pred EEEeCCCCcc-CCCe-----eEEECCCCeECCCCCccccCcCCCCCCCCCCeEEec---------------CCcccCceE
Confidence 3999999999 8888 999999999999999999999999999999983221 357899999
Q ss_pred EEEcccCccccCCccCCCceEEeccCCe---ecCCCCceecCcCCCCCCCCCcEEEccCCccccccCCCCCEEEEEccCC
Q psy833 220 FFGCQDTFKLAGQTDKNDNVVRCQANGI---WDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQGSEVQFGCNKP 296 (642)
Q Consensus 220 ~~~C~~Gy~l~G~~~~~~~~~~C~~~G~---Ws~~~P~C~~~~C~~p~~~~~g~~~~~~~~~~~~~~~~gs~~~~~C~~~ 296 (642)
+|+|+.||+|.|.+. ++|+.+|+ |+...|.|+++.|+.|+.+.||.+.......+. +|++|+|+|+ +
T Consensus 537 ~y~C~~Gy~l~G~~~-----~~C~~~g~~~~Ws~~~P~C~~v~C~~p~~i~nG~~~~~~~~~~~----~g~~v~y~C~-~ 606 (1931)
T 2q7z_A 537 NYSCTTGHRLIGHSS-----AECILSGNAAHWSTKPPICQRIPCGLPPTIANGDFISTNRENFH----YGSVVTYRCN-P 606 (1931)
T ss_pred EEEeCCCcEECCccc-----eEEEeCCCeeecCCCCceeEeeeCCCCCCcCCceEECCCCCCcc----cCCEEEEEEC-C
Confidence 999999999999975 89999986 999999999999999999999998864322222 9999999999 9
Q ss_pred C------eEEeCCCceeeCCC-----------CceE-Eec--CCCCCCccCCC--------CCCCccCCCcCceeccccc
Q psy833 297 G------YILINPRPITCVRE-----------PECK-IIK--PLGLASGRIPD--------SSINATSESPYLVRVNACS 348 (642)
Q Consensus 297 G------y~l~G~~~~~C~~~-----------P~C~-~v~--p~~~~~g~~~~--------~~~~~~~~~~~y~~~~~~~ 348 (642)
| |.|.|+..++|+++ |+|+ +++ +|.+.||.+.. ...+.+.|++||
T Consensus 607 G~~~~~~y~l~G~~~~~C~~~~~~~G~Ws~~~P~C~~~~~C~~P~i~nG~~~~~~~~~y~~g~~v~f~C~~Gy------- 679 (1931)
T 2q7z_A 607 GSGGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCIIPNKCTPPNVENGILVSDNRSLFSLNEVVEFRCQPGF------- 679 (1931)
T ss_pred CCCcccceEEeCCceeEeCCCCCcCceECCCCCcCCcCcccCCCcccCCeEecCCCcccccCCEEEEEcCCCc-------
Confidence 9 78999999999864 9998 665 56678887632 234678999999
Q ss_pred CCCCCCCcccccccccceeeeccCC-cccCccce-eEEeeEEeeceecccccccceeeeeeEeeccccceEEeeccceec
Q psy833 349 VPLIPGPRVQELLAEKNVRLFNVLR-TLANMEVY-VYRLAILVKGVVTNDIVGRPTEIRFFYKQAESENFVVYFPNFNLT 426 (642)
Q Consensus 349 ~~~~~g~~~~~~l~g~~~~~c~~~g-Ws~~~p~c-v~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~ 426 (642)
.|.|...++|+++| |++..|.| ..|. .++...
T Consensus 680 -----------~l~G~~~~~C~~~g~Ws~~~P~C~~~C~------~~p~~~----------------------------- 713 (1931)
T 2q7z_A 680 -----------VMKGPRRVKCQALNKWEPELPSCSRVCQ------PPPDVL----------------------------- 713 (1931)
T ss_pred -----------eEcCCCceEECCCCcCCCCCCccccccC------CCCCCC-----------------------------
Confidence 78999999999998 99999999 4441 111111
Q ss_pred cCCCCCccCcccccCccceeeeeEEeeEEEEEeCcccceeecc-----cCCCCCcCcccccCCCCCCcCCCCCeeecCCC
Q psy833 427 MRDPGNYGELAMITLPKFVQARFVILGIVSYMDNACLKFELMG-----CEEPKVEPLLGYDYGYSPCVDNEPPVFQNCPQ 501 (642)
Q Consensus 427 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~C~~~~gf~l~G-----C~~~g~~~~~~Ws~~~P~C~d~~pP~~~~CP~ 501 (642)
+|..... ....|.+|++|+|+|++ ||+|.| |+++| +|++..|+|+.. .|+.
T Consensus 714 ---~g~~~~~--------~~~~~~~g~~v~y~C~~--Gy~l~G~~~~~C~~~G-----~Ws~~~P~C~~~------~C~~ 769 (1931)
T 2q7z_A 714 ---HAERTQR--------DKDNFSPGQEVFYSCEP--GYDLRGAASMRCTPQG-----DWSPAAPTCEVK------SCDD 769 (1931)
T ss_pred ---CcccccC--------CCCcccCCCEEEEECCC--CCeeCCCCeeEECCCC-----eECCCCCccccc------cCCC
Confidence 1221110 23468899999999999 999999 99999 999999999854 4654
Q ss_pred CceEEEeCCCCeeeEEEcCCceecCCCceeEEEEccCCCCCCceeecceEEEEEEEeCCCCEEEEEEEEEEecCCCC---
Q psy833 502 QPIIVRKGPNGIEPVNITEPVAVDNSGSIARLEIKPQSFKTPMITFHDMAVKYIAYDFDGNVAICEINITVVDETPP--- 578 (642)
Q Consensus 502 ~~i~~~~~~~~~~~v~~~~p~~~dnsg~~~~~~~~~~~~~~~~~~~G~~~Vtyta~D~~Gn~a~C~f~v~v~d~~pP--- 578 (642)
. ....+++.+ .+. . ....|+.+.+.+.. .+.|.|...+++...-..| .|+.+.|
T Consensus 770 p---~~~~~ng~v--~~~--~-~~~~G~~v~~~C~~-----Gy~l~G~~~~~C~~~g~~~----------~Ws~~~P~C~ 826 (1931)
T 2q7z_A 770 F---MGQLLNGRV--LFP--V-NLQLGAKVDFVCDE-----GFQLKGSSASYCVLAGMES----------LWNSSVPVCE 826 (1931)
T ss_pred c---cccCCCceE--ecC--C-CcccCCEEEEECCC-----CCEEcCCCeeEeecCCCCC----------cccCCCCeee
Confidence 3 111223321 111 1 11235556666652 2345577666664321111 1233444
Q ss_pred eEeCCCCcEEEccCC
Q psy833 579 LLSCPQSYIIELVDK 593 (642)
Q Consensus 579 ~i~Cp~~~~i~~~~~ 593 (642)
.|.|+.++.+.++..
T Consensus 827 ~i~C~~p~~~~nG~~ 841 (1931)
T 2q7z_A 827 QIFCPSPPVIPNGRH 841 (1931)
T ss_pred eccCCCCCccCCcee
Confidence 234999988877643
No 8
>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A
Probab=100.00 E-value=7.5e-32 Score=327.24 Aligned_cols=272 Identities=17% Similarity=0.318 Sum_probs=214.9
Q ss_pred CCCCCCCCCCccceecCCCCee----eEEeCCCCeeccCCcCCCCceEecccCCeeecCCCCccC-CcCCCCCCCCCcee
Q psy833 118 FCRVPTPGAEYGNFLDTRYQSS----FFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEG-PVCSDPGRPVDGYQ 192 (642)
Q Consensus 118 ~C~~~~~~p~nG~~~~~~~~~~----~~~~C~~Gy~l~g~~~~~~~~~~C~~~G~Ws~~~p~C~~-~~C~~p~~~~~g~~ 192 (642)
.|+ +++.+.||.+......|. ..|+|++||.|.|.. .++|+ +|+|+. .|.|++ +.|+.|+.+.||.+
T Consensus 792 ~C~-~pp~i~ng~~~~~~~~~~~G~~v~y~C~~Gy~l~g~~-----~~~C~-~G~Ws~-~p~C~~~~~C~~p~~~~ng~~ 863 (1213)
T 1haq_A 792 LCP-PPPQIPNSHNMTTTLNYRDGEKVSVLCQENYLIQEGE-----EITCK-DGRWQS-IPLCVEKIPCSQPPQIEHGTI 863 (1213)
T ss_pred cCC-CCCCCCCCeecCCCCcccCCCEEEEECCCCceeCCCC-----eeECC-CCCcCC-cceeccCCcCCCCCccCCCEE
Confidence 588 567889998876533332 399999999999999 99999 999998 999998 69999999999983
Q ss_pred eecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceecCcCCCCCCCCCcEEE
Q psy833 193 VATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGYQV 272 (642)
Q Consensus 193 ~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~~g~~~ 272 (642)
.. .. .....|.+|++|+|+|++||.|.|... ++|+. |+|+. .|.|+++.|+.|+.+.||.+.
T Consensus 864 ~~------~~-----~~~~~~~~gs~v~y~C~~Gy~l~G~~~-----~~C~~-G~Ws~-~p~C~~~~C~~p~~~~ng~~~ 925 (1213)
T 1haq_A 864 NS------SR-----SSQESYAHGTKLSYTCEGGFRISEENE-----TTCYM-GKWSS-PPQCEGLPCKSPPEISHGVVA 925 (1213)
T ss_pred ec------cc-----CCCCcccCCCEEEEECCCCceECCCcc-----eEECC-CcccC-CCceeecCCCCCCccCCceEe
Confidence 32 11 000247899999999999999999865 89987 99997 799999999999999999987
Q ss_pred cc--CCccccccCCCCCEEEEEccCCCeEEeCCCceeeCC-----CCceEEec---CCCCCCccCCC--------CCCCc
Q psy833 273 AT--SYEQVRYDDEQGSEVQFGCNKPGYILINPRPITCVR-----EPECKIIK---PLGLASGRIPD--------SSINA 334 (642)
Q Consensus 273 ~~--~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~~-----~P~C~~v~---p~~~~~g~~~~--------~~~~~ 334 (642)
.. .+. +|++|+|+|+ +||.|+|+..++|+. .|.|+++. ++.+.||.+.. ...+.
T Consensus 926 ~~~~~~~-------~g~~v~~~C~-~Gy~l~G~~~~~C~~~~Ws~~P~C~~~~C~~~p~~~ng~~~~~~~~~y~~g~~v~ 997 (1213)
T 1haq_A 926 HMSDSYQ-------YGEEVTYKCF-EGFGIDGPAIAKCLGEKWSHPPSCIKTDCLSLPSFENAIPMGEKKDVYKAGEQVT 997 (1213)
T ss_pred ccCCccc-------cCCEEEEECC-CCceecCCCeeEECCCccCCCCceecCcCCCCCcCCCCEEeccCcCCEEcCCEEE
Confidence 63 344 9999999999 999999999999997 49999886 45566775432 23467
Q ss_pred cCCCcCceecccccCCCCCCCcccccccccceeeeccCC-cccCccce--eEEeeEEeeceecccccccceeeeeeEeec
Q psy833 335 TSESPYLVRVNACSVPLIPGPRVQELLAEKNVRLFNVLR-TLANMEVY--VYRLAILVKGVVTNDIVGRPTEIRFFYKQA 411 (642)
Q Consensus 335 ~~~~~~y~~~~~~~~~~~~g~~~~~~l~g~~~~~c~~~g-Ws~~~p~c--v~~~~~~~~g~~~~~~~g~~~~~~~~~~~~ 411 (642)
+.|.+|| .|.|...++|. +| |++ .|+| +.|.. ++..
T Consensus 998 y~C~~Gy------------------~l~G~~~~~C~-~g~Ws~-~P~C~~~~C~~------p~~~--------------- 1036 (1213)
T 1haq_A 998 YTCATYY------------------KMDGASNVTCI-NSRWTG-RPTCRDTSCVN------PPTV--------------- 1036 (1213)
T ss_pred EECCCCC------------------EecCCCccccc-CCccCC-CCccccccCCC------Cccc---------------
Confidence 8899999 88999999999 88 999 9999 45521 1100
Q ss_pred cccceEEeeccceeccCCCCCccCcccccCccceeeeeEEeeEEEEEeCcccceeecc-----cCCCCCcCcccccCCCC
Q psy833 412 ESENFVVYFPNFNLTMRDPGNYGELAMITLPKFVQARFVILGIVSYMDNACLKFELMG-----CEEPKVEPLLGYDYGYS 486 (642)
Q Consensus 412 ~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~C~~~~gf~l~G-----C~~~g~~~~~~Ws~~~P 486 (642)
.+|..... .+..|.+|++|+|.|++ ||+|.| |+ +| +| +..|
T Consensus 1037 -----------------~ng~~~~~--------~~~~~~~g~~v~~~C~~--gy~l~G~~~~~C~-~G-----~W-~~~p 1082 (1213)
T 1haq_A 1037 -----------------QNAYIVSR--------QMSKYPSGERVRYQCRS--PYEMFGDEEVMCL-NG-----NW-TEPP 1082 (1213)
T ss_pred -----------------cCceEecc--------CCCcccCCCEEEEEeCC--CCcccCCceeEcC-CC-----Cc-CCCc
Confidence 11111100 24568899999999999 999999 99 88 99 7899
Q ss_pred CCcCCCCCeeecCCCC
Q psy833 487 PCVDNEPPVFQNCPQQ 502 (642)
Q Consensus 487 ~C~d~~pP~~~~CP~~ 502 (642)
+|++... .|+..
T Consensus 1083 ~C~~~~~----~C~~p 1094 (1213)
T 1haq_A 1083 QCKDSTG----KCGPP 1094 (1213)
T ss_pred eeECCCC----CCCCC
Confidence 9997521 46654
No 9
>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens}
Probab=100.00 E-value=3.7e-31 Score=333.52 Aligned_cols=504 Identities=20% Similarity=0.311 Sum_probs=319.6
Q ss_pred CCCCCc-cCCCCeeecCCCCCcccC-CCCceecCCCCCCc--eeCCC------CceecCCCCccccccccCCCCCeecCC
Q psy833 5 QVPRCL-HCPAGTFAGINQKTCTPC-PRGFYQNNDRQGVC--LKCPM------GTYTREEGSKAVQECVPVCGYGTYSPT 74 (642)
Q Consensus 5 ~~~~C~-~C~~G~~~~~~~~~C~~C-p~G~y~~~~~~~~C--~~Cp~------g~~~~~~gs~~~~~C~~~C~~G~y~~~ 74 (642)
....+. .|++||+...... .| ..|.+... ...| ..||. |......+..--+.+.-.|..||....
T Consensus 24 ~G~~~~y~C~~Gy~~~~~~~---~C~~~g~W~~~--~~~c~~~~C~~p~~~~nG~~~~~~~~~~g~~v~~~C~~GY~L~G 98 (1931)
T 2q7z_A 24 IGTYLNYECRPGYSGRPFSI---ICLKNSVWTGA--KDRCRRKSCRNPPDPVNGMVHVIKGIQFGSQIKYSCTKGYRLIG 98 (1931)
T ss_pred CCCEEEEEcCCCCcCCCceE---EeCCCCccCCC--CCcccCCCCcCCCCCCCCeEEecCCeEeCCEEEEEECCCCEEcC
Confidence 345565 8888885321122 44 36666643 2223 35652 433222222222345557888887754
Q ss_pred C-CCCcccCCCC---cccCCCCCCCCCCCCCCCCceeeccCCCCCCCCCCCCCCCCCccceecCC-CCee----eEEeCC
Q psy833 75 G-LVPCLECPRN---SYTGEPPVGGHKDCEACPANMFTYQPAAPARNFCRVPTPGAEYGNFLDTR-YQSS----FFFGCQ 145 (642)
Q Consensus 75 g-~~~C~~C~~G---~y~~~~p~~g~~~C~~Cp~G~~~~~~~~~s~~~C~~~~~~p~nG~~~~~~-~~~~----~~~~C~ 145 (642)
. ...|+. .| .|....| .|. ...|+ +++.+.||.+.... ..+. ..|+|+
T Consensus 99 ~~~~~C~~--~g~~~~Ws~~~P-----~C~---------------~~~C~-~pp~~~nG~~~~~~~~~~~~g~~v~y~C~ 155 (1931)
T 2q7z_A 99 SSSATCII--SGDTVIWDNETP-----ICD---------------RIPCG-LPPTITNGDFISTNRENFHYGSVVTYRCN 155 (1931)
T ss_pred CccceEec--CCCccccCCCCC-----Eee---------------eccCC-CCCcCCCCeEeccCCCccccCCEEEEEeC
Confidence 2 233442 45 5665433 454 34676 56788999887542 2222 399999
Q ss_pred CC------eeccCCcCCCCceEecccC----CeeecCCCCc-cCCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccc
Q psy833 146 DT------FKLAGQTDKNDNVVRCQAN----GIWDFGDLRC-EGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTR 214 (642)
Q Consensus 146 ~G------y~l~g~~~~~~~~~~C~~~----G~Ws~~~p~C-~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~ 214 (642)
+| |.|.|.. .++|+++ |.|+++.|.| +.+.|+.|.. .||.+.. +....|.
T Consensus 156 ~g~~~~~~y~l~G~~-----~~~C~~~~~~~g~Ws~~~P~C~~~~~C~~p~~-~nG~~~~-------------~~~~~~~ 216 (1931)
T 2q7z_A 156 PGSGGRKVFELVGEP-----SIYCTSNDDQVGIWSGPAPQCIIPNKCTPPNV-ENGILVS-------------DNRSLFS 216 (1931)
T ss_pred CCCCCceeEEecCCc-----eEEEccCCCcCceECCCCCCcccccCCCCCCC-CCeEEeC-------------CCCCccc
Confidence 99 9999999 9999986 9999999999 6788998764 5887321 1113478
Q ss_pred cCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceecCcCCCCCCCCCcEEEccCCccccccCCCCCEEEEEcc
Q psy833 215 YQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQGSEVQFGCN 294 (642)
Q Consensus 215 ~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~~g~~~~~~~~~~~~~~~~gs~~~~~C~ 294 (642)
++++|+|+|++||.|.|... ++|+++|+|++..|.|++ .|+.|+.+.||.+.......++ +|++|+|+|+
T Consensus 217 ~~~~v~f~C~~Gy~l~G~~~-----~~C~~~g~Ws~~~P~C~~-~C~~p~~~~ng~~~~~~~~~~~----~g~~v~~~C~ 286 (1931)
T 2q7z_A 217 LNEVVEFRCQPGFVMKGPRR-----VKCQALNKWEPELPSCSR-VCQPPPDVLHAERTQRDKDNFS----PGQEVFYSCE 286 (1931)
T ss_pred cCCEEEEEcCCCceeCCcce-----EEEcCCCeECCCCceeec-cccCCCCCcCceeecccCCCCC----CCCEEEEEcC
Confidence 99999999999999999975 899999999999999998 8999999999999874222222 9999999999
Q ss_pred CCCeEEeCCCceeeCC-------CCceEEecCC----CCCCccCC------CCCCCccCCCcCceecccccCCCCCCCcc
Q psy833 295 KPGYILINPRPITCVR-------EPECKIIKPL----GLASGRIP------DSSINATSESPYLVRVNACSVPLIPGPRV 357 (642)
Q Consensus 295 ~~Gy~l~G~~~~~C~~-------~P~C~~v~p~----~~~~g~~~------~~~~~~~~~~~~y~~~~~~~~~~~~g~~~ 357 (642)
+||.|.|...++|++ .|.|+++.++ .+.||.+. ......+.|+.||
T Consensus 287 -~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~~~C~~~~~~~~ng~~~~~~~~~~g~~~~~~C~~Gy---------------- 349 (1931)
T 2q7z_A 287 -PGYDLRGAASMRCTPQGDWSPAAPTCEVKSCDDFMGQLLNGRVLFPVNLQLGAKVDFVCDEGF---------------- 349 (1931)
T ss_pred -CCCeecCCCceEecCCCeECCCCCcccccccCCCCcCCCCceEecCCCcccCCEEEEECCCCC----------------
Confidence 999999999999996 4999998733 35677653 2234678899999
Q ss_pred cccccccceeeeccCC----cccCccce--eEEeeE--Eeeceeccc-----ccccceeeeeeEeecc----ccceEEee
Q psy833 358 QELLAEKNVRLFNVLR----TLANMEVY--VYRLAI--LVKGVVTND-----IVGRPTEIRFFYKQAE----SENFVVYF 420 (642)
Q Consensus 358 ~~~l~g~~~~~c~~~g----Ws~~~p~c--v~~~~~--~~~g~~~~~-----~~g~~~~~~~~~~~~~----~~~~~~~~ 420 (642)
.|.|...++|..+| |++..|+| +.|... ..+|..... ..|. .+.|.... ...|..-
T Consensus 350 --~l~G~~~~~C~~~g~~~~Ws~~~P~C~~i~C~~p~~~~ng~~~~~~~~~~~~g~----~v~y~C~~~~~~g~gy~l~- 422 (1931)
T 2q7z_A 350 --QLKGSSASYCVLAGMESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGK----AVNYTCDPHPDRGTSFDLI- 422 (1931)
T ss_pred --EeCCCCccccccCCCcceecCCCCeeEeccCCCCCCCCccceecccccceecCC----EEEEEcCCCCccCcceEec-
Confidence 78899999999988 99999999 566411 112221111 1111 12222221 0012211
Q ss_pred ccceeccC----CCCCccCcc--cccC-----c----------cceeeeeEEeeEEEEEeCcccceeecc-----cCCCC
Q psy833 421 PNFNLTMR----DPGNYGELA--MITL-----P----------KFVQARFVILGIVSYMDNACLKFELMG-----CEEPK 474 (642)
Q Consensus 421 p~~~~~~~----~~g~~~~~~--~~~~-----~----------~~~~~~~~~~~~v~~~C~~~~gf~l~G-----C~~~g 474 (642)
-.-.++|. .+|.|+... .+.+ | ......|.+|++|.|+|++ ||. .| |++++
T Consensus 423 g~~~~~C~~~~~~~g~Ws~~~P~C~~~~~C~~p~~~~~~~~~~~~~~~~~~~g~~v~y~C~~--Gy~-~g~~~~~C~~~g 499 (1931)
T 2q7z_A 423 GESTIRCTSDPQGNGVWSSPAPRCGILGHCQAPDHFLFAKLKTQTNASDFPIGTSLKYECRP--EYY-GRPFSITCLDNL 499 (1931)
T ss_pred CCcccEeecCCCCCCcccCCCCccccccccCCccccccCcccccccccccCCCCEEEEeCCC--Ccc-CCCeeEEECCCC
Confidence 11124453 568888431 1100 0 0123467889999999999 999 67 99999
Q ss_pred CcCcccccCCCCCCcCCCCCeeecCCCCceEEEeCCCCeeeEEEcCCceecCCCceeEEEEccCCCCCCceeecceEEEE
Q psy833 475 VEPLLGYDYGYSPCVDNEPPVFQNCPQQPIIVRKGPNGIEPVNITEPVAVDNSGSIARLEIKPQSFKTPMITFHDMAVKY 554 (642)
Q Consensus 475 ~~~~~~Ws~~~P~C~d~~pP~~~~CP~~~i~~~~~~~~~~~v~~~~p~~~dnsg~~~~~~~~~~~~~~~~~~~G~~~Vty 554 (642)
+|++..|+|+.+ .|+..+ ...||.+.+. .....|.++.+.+.+ .+.|.|...+++
T Consensus 500 -----~Ws~~~p~C~~~------~C~~p~----~~~nG~v~~~-----~~~~~g~~v~y~C~~-----Gy~l~G~~~~~C 554 (1931)
T 2q7z_A 500 -----VWSSPKDVCKRK------SCKTPP----DPVNGMVHVI-----TDIQVGSRINYSCTT-----GHRLIGHSSAEC 554 (1931)
T ss_pred -----eECCCCCccccC------cCCCCC----CCCCCeEEec-----CCcccCceEEEEeCC-----CcEECCccceEE
Confidence 999999999875 455431 1223432221 011235566666652 234556665555
Q ss_pred EEEeCCCCEEEEEEEEEEecCCCCe---EeCCCCcEEEccCCCceeEEEecCCCcceeeecCCCCeEEEeCCCCc-----
Q psy833 555 IAYDFDGNVAICEINITVVDETPPL---LSCPQSYIIELVDKQDSYVMNFNETRRRVNVSDASGEVTVTFSPDRA----- 626 (642)
Q Consensus 555 ta~D~~Gn~a~C~f~v~v~d~~pP~---i~Cp~~~~i~~~~~~~~~~v~w~~p~~~~~~~Dnsg~~~v~~~~~~g----- 626 (642)
.+. |++ ..++..+|. +.|+.+..|.++..... +.. .+ .-...|++..++|
T Consensus 555 ~~~---g~~-------~~Ws~~~P~C~~v~C~~p~~i~nG~~~~~-----~~~----~~---~~g~~v~y~C~~G~~~~~ 612 (1931)
T 2q7z_A 555 ILS---GNA-------AHWSTKPPICQRIPCGLPPTIANGDFIST-----NRE----NF---HYGSVVTYRCNPGSGGRK 612 (1931)
T ss_pred EeC---CCe-------eecCCCCceeEeeeCCCCCCcCCceEECC-----CCC----Cc---ccCCEEEEEECCCCCccc
Confidence 552 221 124556663 35998888877532100 000 01 1123466666666
Q ss_pred -cccCCCceEEEEEE
Q psy833 627 -TILLGDFENVTVTA 640 (642)
Q Consensus 627 -~~~~G~~~~v~~ta 640 (642)
...+|+. .++.++
T Consensus 613 ~y~l~G~~-~~~C~~ 626 (1931)
T 2q7z_A 613 VFELVGEP-SIYCTS 626 (1931)
T ss_pred ceEEeCCc-eeEeCC
Confidence 2378888 777765
No 10
>3o8e_B Membrane cofactor protein; short consensus repeat, complement control protein, fiber KN virus-receptor interaction, cell adhesion-immunity complex; HET: NAG; 2.84A {Homo sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M*
Probab=100.00 E-value=1.3e-32 Score=278.36 Aligned_cols=225 Identities=20% Similarity=0.325 Sum_probs=176.6
Q ss_pred CCCCCCccceecC-CCCee----eEEeCCCCeeccCC--cCCCCceEecccCCeeec-CCCCccCCcCCCCCCCCCceee
Q psy833 122 PTPGAEYGNFLDT-RYQSS----FFFGCQDTFKLAGQ--TDKNDNVVRCQANGIWDF-GDLRCEGPVCSDPGRPVDGYQV 193 (642)
Q Consensus 122 ~~~~p~nG~~~~~-~~~~~----~~~~C~~Gy~l~g~--~~~~~~~~~C~~~G~Ws~-~~p~C~~~~C~~p~~~~~g~~~ 193 (642)
+++...|+.+... +..|. +.|+|++||.|.|+ . .++|+++|+|+. ..|.|+++.|+.|+.+.||.+.
T Consensus 3 ~PP~~~~~~~~~~~~~~y~~g~~~~y~C~~Gy~~~g~~~~-----~~~C~~~g~Ws~~~~p~C~~~~C~~p~~~~nG~~~ 77 (252)
T 3o8e_B 3 EPPTFEAMELIGKPKPYYEIGERVDYKCKKGYFYIPPLAT-----HTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAV 77 (252)
T ss_dssp SCCCCSSEEESSCCCSSCCTTCEEEEEECTTEEECSSSCC-----EEEBCTTSSBCCCCSTTEEECBCCCCCCCTTEEEE
T ss_pred CCCCCCcccCcCCcCCcCCCCCEEEEEcCCCccCCCCCCC-----eEEECCCCcCCCCCCCceeeeECcCCCCCCCcEEe
Confidence 4456778877654 22232 39999999999975 6 899999999998 5899999999999999999833
Q ss_pred ecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCC---eecCCCCceecCcCCCCCCCCCcE
Q psy833 194 ATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANG---IWDFGDLRCEGPVCSDPGRPVDGY 270 (642)
Q Consensus 194 ~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G---~Ws~~~P~C~~~~C~~p~~~~~g~ 270 (642)
. .. ..|.+|++|+|+|++||+|.|++. ++|+.+| +|++..|.|+.+.|+.|+.+.||.
T Consensus 78 ~------~~--------~~~~~g~~~~~~C~~Gy~l~G~~~-----~~C~~~G~~~~Ws~~~P~C~~~~C~~p~~~~nG~ 138 (252)
T 3o8e_B 78 P------AN--------GTYEFGYQMHFICNEGYYLIGEEI-----LYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGK 138 (252)
T ss_dssp E------TT--------SSSBTTCEEEEEECTTEEEESCSE-----EEEEESSSCEEESSCCCEEEECEECCCCCCTTEE
T ss_pred e------cC--------CCccCCCEEEEECCCCCeECCCCE-----EEEeCCCCCCeeCCCCCeEeeeEcCCCCCCCCCc
Confidence 2 10 348999999999999999999864 8999988 899999999999999999999999
Q ss_pred EEccCCccccccCCCCCEEEEEccCC-----CeEEeCCCceeeCCCCceEEecCCCCCCccCCCCCCCccCCCcCceecc
Q psy833 271 QVATSYEQVRYDDEQGSEVQFGCNKP-----GYILINPRPITCVREPECKIIKPLGLASGRIPDSSINATSESPYLVRVN 345 (642)
Q Consensus 271 ~~~~~~~~~~~~~~~gs~~~~~C~~~-----Gy~l~G~~~~~C~~~P~C~~v~p~~~~~g~~~~~~~~~~~~~~~y~~~~ 345 (642)
+.......+. +|++|+|+|+ + ||.|+|+..++|+.
T Consensus 139 ~~~~~~~~~~----~g~~v~y~C~-~g~~~~gy~l~G~~~~~C~~----------------------------------- 178 (252)
T 3o8e_B 139 HTFSEVEVFE----YLDAVTYSCD-PAPGPDPFSLIGESTIYCGD----------------------------------- 178 (252)
T ss_dssp ESSTTCCCEE----TTCEEEEEEC-CCSSSSCCEEESCSEEEBCT-----------------------------------
T ss_pred EeccCCceec----CCCEEEEEeC-CCCCCCCeEEeCCCceEECC-----------------------------------
Confidence 9864322233 9999999999 7 78888877777765
Q ss_pred cccCCCCCCCcccccccccceeeeccCC-cccCccce--eEEeeEEeeceecccccccceeeeeeEeeccccceEEeecc
Q psy833 346 ACSVPLIPGPRVQELLAEKNVRLFNVLR-TLANMEVY--VYRLAILVKGVVTNDIVGRPTEIRFFYKQAESENFVVYFPN 422 (642)
Q Consensus 346 ~~~~~~~~g~~~~~~l~g~~~~~c~~~g-Ws~~~p~c--v~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~ 422 (642)
+| |++..|.| +.|. .+ ...+|..
T Consensus 179 --------------------------~G~Ws~~~P~C~~v~C~------~P-~~~ng~~--------------------- 204 (252)
T 3o8e_B 179 --------------------------NSVWSRAAPECKVVKCR------FP-VVENGKQ--------------------- 204 (252)
T ss_dssp --------------------------TSSBSSCCCEEECCCBC------CC-CCTTEEE---------------------
T ss_pred --------------------------CCeECCCCCEEeeeecC------CC-cccCCcE---------------------
Confidence 45 88888888 3452 00 1111110
Q ss_pred ceeccCCCCCccCcccccCccceeeeeEEeeEEEEEeCcccceeecc-----cCCCCCcCcccccCCCCCCcC
Q psy833 423 FNLTMRDPGNYGELAMITLPKFVQARFVILGIVSYMDNACLKFELMG-----CEEPKVEPLLGYDYGYSPCVD 490 (642)
Q Consensus 423 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~C~~~~gf~l~G-----C~~~g~~~~~~Ws~~~P~C~d 490 (642)
.. ..+..|.+|++|+|+|++ ||+|.| |+++| +|++..|+|++
T Consensus 205 -----------~~--------~~~~~~~~g~~v~f~C~~--Gy~l~G~~~~~C~~~g-----~Ws~~~P~C~~ 251 (252)
T 3o8e_B 205 -----------IS--------GFGKKFYYKATVMFECDK--GFYLDGSDTIVCDSNS-----TWDPPVPKCLK 251 (252)
T ss_dssp -----------EE--------CCCSCBCTTCEEEEEECT--TEEEESCSEEEECTTS-----CEESCCCEEEE
T ss_pred -----------ec--------CCCCccccCCEEEEEeCC--CCEEcCCCcEEECCCC-----eECCCCCeeee
Confidence 00 023467889999999999 999999 99999 99999999975
No 11
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=100.00 E-value=1.6e-32 Score=308.73 Aligned_cols=271 Identities=16% Similarity=0.322 Sum_probs=213.7
Q ss_pred CCCCCCCCCCccceecCC--CCee----eEEeCCCCeeccCCcCCCCceEecccCCeeecCCCCccCCcCCCCCCCCCce
Q psy833 118 FCRVPTPGAEYGNFLDTR--YQSS----FFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGY 191 (642)
Q Consensus 118 ~C~~~~~~p~nG~~~~~~--~~~~----~~~~C~~Gy~l~g~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~~g~ 191 (642)
.|. .++.+.|+.+.... ..|. +.|+|++|| +.+.. .++|+.+|+|++..|.|+++.|+.|+.+.||.
T Consensus 2 ~C~-~pp~~~~~~~~~~~~~~~~~~g~~~~y~C~~Gy-~~~~~-----~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~ng~ 74 (551)
T 1ntl_A 2 HCP-APSQLPSAKPINLTDESMFPIGTYLLYECLPGY-IKRQF-----SITCKQDSTWTSAEDKCIRKQCKTPSDPENGL 74 (551)
T ss_pred CCc-CCCCCCcceeccccCCCCccCCCEEEEEeCCCC-cCCCc-----eEEECCCCeECCCCCCcccCCCcCCCCCCCcE
Confidence 466 45667788754321 2232 399999999 45667 89999999999999999999999999999998
Q ss_pred eeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCC---eecCCCCceecCcCCCCCCCCC
Q psy833 192 QVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANG---IWDFGDLRCEGPVCSDPGRPVD 268 (642)
Q Consensus 192 ~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G---~Ws~~~P~C~~~~C~~p~~~~~ 268 (642)
+. +. ..+.+|++|.|+|++||+|.|... ++|+.+| .|++..|.|+.+.|+.|+.+.|
T Consensus 75 ~~------~~---------~~~~~g~~~~y~C~~Gy~l~G~~~-----~~C~~~g~~~~Ws~~~p~C~~~~C~~p~~~~n 134 (551)
T 1ntl_A 75 VH------VH---------TGIEFGSRINYTCNQGYRLIGSSS-----AVCVITDQSVDWDTEAPICEWIPCEIPPGIPN 134 (551)
T ss_pred EE------cC---------CCcccCCEEEEECCCCCEECCCcc-----EEEEeCCCcceeCCCCCCCCCCCCCCCCcCCC
Confidence 22 21 347899999999999999999864 8999998 8999999999999999999999
Q ss_pred cEEEccCCccccccCCCCCEEEEEccCCC------eEEeCCCceeeCC-----------CCceEE-ec---CCCCCCccC
Q psy833 269 GYQVATSYEQVRYDDEQGSEVQFGCNKPG------YILINPRPITCVR-----------EPECKI-IK---PLGLASGRI 327 (642)
Q Consensus 269 g~~~~~~~~~~~~~~~~gs~~~~~C~~~G------y~l~G~~~~~C~~-----------~P~C~~-v~---p~~~~~g~~ 327 (642)
|.+.......+. +|++|+|+|+ +| |.|.|+..++|+. .|.|+. +. |+.+.||.+
T Consensus 135 G~~~~~~~~~~~----~g~~v~y~C~-~G~~~~~~y~l~G~~~~~C~~~~~~~G~Ws~~~P~C~~~~~C~~p~~~~ng~~ 209 (551)
T 1ntl_A 135 GDFFSSTREDFH----YGMVVTYRCN-TDARGKALFNLVGEPSLYCTSNDGEIGVWSGPPPQCIELNKCTPPPYVENAVM 209 (551)
T ss_pred CcEecCCCCccc----cCCEEEEEeC-CCCCccceeEecCCcceEeeCCCCcCCEECCCCCcccCccccCCCCCCCCceE
Confidence 998763222222 9999999999 99 9999999999985 389996 54 466778865
Q ss_pred CC--------CCCCccCCCcCceecccccCCCCCCCcccccccccceeeeccCC-cccCccce--e-EEeeEEeeceecc
Q psy833 328 PD--------SSINATSESPYLVRVNACSVPLIPGPRVQELLAEKNVRLFNVLR-TLANMEVY--V-YRLAILVKGVVTN 395 (642)
Q Consensus 328 ~~--------~~~~~~~~~~~y~~~~~~~~~~~~g~~~~~~l~g~~~~~c~~~g-Ws~~~p~c--v-~~~~~~~~g~~~~ 395 (642)
.. .....+.|++|| .|.|...++|..+| |++..|.| + .|. .+..
T Consensus 210 ~~~~~~~~~~g~~v~~~C~~Gy------------------~l~G~~~~~C~~~g~Ws~~~P~C~~~~~C~------~p~~ 265 (551)
T 1ntl_A 210 LSENRSLFSLRDIVEFRCHPGF------------------IMKGASSVHCQSLNKWEPELPSCFKGVICR------LPQE 265 (551)
T ss_pred eCCCCCcccCCCEEEEECCCCC------------------EEcCCCCeEECCCCeECCCCccccccccCC------CCCc
Confidence 42 234677899999 88999999999999 99999999 2 452 1111
Q ss_pred cccccceeeeeeEeeccccceEEeeccceeccCCCCCccCcccccCccceeeeeEEeeEEEEEeCcccceeecc-----c
Q psy833 396 DIVGRPTEIRFFYKQAESENFVVYFPNFNLTMRDPGNYGELAMITLPKFVQARFVILGIVSYMDNACLKFELMG-----C 470 (642)
Q Consensus 396 ~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~C~~~~gf~l~G-----C 470 (642)
. .+|..... ....|.+|++|+|+|++ ||+|.| |
T Consensus 266 ~--------------------------------~~g~~~~~--------~~~~~~~g~~v~~~C~~--Gy~l~G~~~~~C 303 (551)
T 1ntl_A 266 M--------------------------------SGFQKGLG--------MKKEYYYGENVTLECED--GYTLEGSSQSQC 303 (551)
T ss_pred C--------------------------------CCCccccC--------CCCCcccCCEEEEEcCC--CcEecCCcceEE
Confidence 1 12222100 12358899999999999 999999 9
Q ss_pred CCCCCcCcccccCCCCCCcCC
Q psy833 471 EEPKVEPLLGYDYGYSPCVDN 491 (642)
Q Consensus 471 ~~~g~~~~~~Ws~~~P~C~d~ 491 (642)
+++| +|++..|+|+..
T Consensus 304 ~~~g-----~W~~~~p~C~~~ 319 (551)
T 1ntl_A 304 QSDG-----SWNPLLAKCVSR 319 (551)
T ss_pred eCCC-----eECCCCCeeeee
Confidence 9999 999999999864
No 12
>2xrb_A Complement regulatory protein CRRY; immune system, immunology; 2.50A {Rattus norvegicus} PDB: 2xrd_A
Probab=99.97 E-value=2.2e-31 Score=274.55 Aligned_cols=231 Identities=19% Similarity=0.382 Sum_probs=179.5
Q ss_pred CCCCCCCCCCCCccceecCC--CCe----eeEEeCCCCeeccCCcCCCCceEecccCCeeecCCCCccCCcCCCCCCCCC
Q psy833 116 RNFCRVPTPGAEYGNFLDTR--YQS----SFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVD 189 (642)
Q Consensus 116 ~~~C~~~~~~p~nG~~~~~~--~~~----~~~~~C~~Gy~l~g~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~~ 189 (642)
...|. .++.+.|+.+.... ..| ...|+|++|| +.|.. .++|+.+|+|+...|.|+++.|+.|+.+.|
T Consensus 35 ~~~C~-~pp~~~~~~~~~~~~~~~~~~g~~~~y~C~~Gy-~~~~~-----~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~n 107 (290)
T 2xrb_A 35 LGQCP-APPLFPYAKPINPTDESTFPVGTSLKYECRPGY-IKRQF-----SITCEVNSVWTSPQDVCIRKQCETPLDPQN 107 (290)
T ss_dssp --CBC-SCCCCSSEEESSCCSCSCBCTTCEEEEEECTTB-CCCEE-----EEEECTTSCEECCTTCSCBCBCCCCCCCTT
T ss_pred ccccc-CCCCCCccccccccccCcccCCCEEEEEccCCc-CCCCC-----eEEECCCCeECCCCCCcCcCCCcCCCCCCC
Confidence 35677 45677888775432 122 2399999999 56667 899999999999999999999999999999
Q ss_pred ceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCC---eecCCCCceecCcCCCCCCC
Q psy833 190 GYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANG---IWDFGDLRCEGPVCSDPGRP 266 (642)
Q Consensus 190 g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G---~Ws~~~P~C~~~~C~~p~~~ 266 (642)
|.+. +. ..+.+|++|+|+|++||+|.|++. ++|+.+| +|++..|.|+.+.|+.|+.+
T Consensus 108 G~~~------~~---------~~~~~G~~v~y~C~~GY~l~G~~~-----~~C~~~g~~~~Ws~~~P~C~~v~C~~p~~~ 167 (290)
T 2xrb_A 108 GIVH------VN---------TDIRFGSSITYTCNEGYRLIGSSS-----AMCIISDQSVAWDAEAPICESIPCEIPPSI 167 (290)
T ss_dssp EEEE------ES---------SCSBTTCEEEEEECTTEEEESCSE-----EEEEEETTEEEESSCCCEEEECEECCCCCB
T ss_pred ceEe------cC---------CCcccCCEEEEECCCCceeCCCCc-----eEEEeCCCCceeCCCCCeeccccCCCCCCC
Confidence 9832 21 347999999999999999999864 8999988 89999999999999999999
Q ss_pred CCcEEEccCCccccccCCCCCEEEEEccCCC------eEEeCCCceeeCCCCceEEecCCCCCCccCCCCCCCccCCCcC
Q psy833 267 VDGYQVATSYEQVRYDDEQGSEVQFGCNKPG------YILINPRPITCVREPECKIIKPLGLASGRIPDSSINATSESPY 340 (642)
Q Consensus 267 ~~g~~~~~~~~~~~~~~~~gs~~~~~C~~~G------y~l~G~~~~~C~~~P~C~~v~p~~~~~g~~~~~~~~~~~~~~~ 340 (642)
.||.+.......+. +|++|+|+|+ +| |.|+|+..++|+.+
T Consensus 168 ~nG~~~~~~~~~~~----~g~~v~y~C~-~G~~~~~~y~l~G~~~~~C~~~----------------------------- 213 (290)
T 2xrb_A 168 PNGDFFSPNREDFH----YGMVVTYQCN-TDARGKKLFNLVGEPSIHCTSI----------------------------- 213 (290)
T ss_dssp TTEEEECSSTTCEE----TTCEEEEEEC-BCTTSCBCEEEESCSEEEEEES-----------------------------
T ss_pred CCCeEecCCCCccc----cCCEEEEEeC-CCCCCcceEEecCCceeEecCC-----------------------------
Confidence 99998864322233 9999999999 99 88999888888762
Q ss_pred ceecccccCCCCCCCcccccccccceeeeccCC-cccCcccee---EEeeEEeeceecccccccceeeeeeEeeccccce
Q psy833 341 LVRVNACSVPLIPGPRVQELLAEKNVRLFNVLR-TLANMEVYV---YRLAILVKGVVTNDIVGRPTEIRFFYKQAESENF 416 (642)
Q Consensus 341 y~~~~~~~~~~~~g~~~~~~l~g~~~~~c~~~g-Ws~~~p~cv---~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~ 416 (642)
. ...| |++..|.|+ .|.. +...
T Consensus 214 ---------------------~-------~~~G~Ws~~~P~C~~~~~C~~-------p~~~------------------- 239 (290)
T 2xrb_A 214 ---------------------D-------GQVGVWSGPPPQCIELNKCTP-------PHVE------------------- 239 (290)
T ss_dssp ---------------------S-------SSSEEESSCCCEEEETTEECC-------CCCT-------------------
T ss_pred ---------------------C-------CCCCeECCCCCcccccccCCC-------CCCC-------------------
Confidence 0 0136 999999993 3420 1111
Q ss_pred EEeeccceeccCCCCCccCcccccCccceeeeeEEeeEEEEEeCcccceeecc-----cCCCCCcCcccccCCCCCCc
Q psy833 417 VVYFPNFNLTMRDPGNYGELAMITLPKFVQARFVILGIVSYMDNACLKFELMG-----CEEPKVEPLLGYDYGYSPCV 489 (642)
Q Consensus 417 ~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~C~~~~gf~l~G-----C~~~g~~~~~~Ws~~~P~C~ 489 (642)
+|.... ..+..|.+|++|+|+|++ ||+|.| |+++| +|++..|+|+
T Consensus 240 -------------nG~~~~--------~~~~~y~~g~~v~f~C~~--Gy~l~G~~~~~C~~~g-----~Ws~~~P~C~ 289 (290)
T 2xrb_A 240 -------------NAVIVS--------KNKSLFSLRDMVEFRCQD--GFMMKGDSSVYCRSLN-----RWEPQLPSCA 289 (290)
T ss_dssp -------------TEEECS--------CCCSSEETTCEEEEEECT--TCEEESCSEEEEETTT-----EEESCCCEEE
T ss_pred -------------CCeEec--------CCCCcccCCCEEEEEcCC--CCEECCCCCeEECCCC-----eECCCCCeee
Confidence 111110 023468899999999999 999999 99999 9999999996
No 13
>2wii_C H factor 1, complement factor H; immune system, sushi, secreted, polymorphism, glycoprotein, complement system, complement pathway, immune response; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2rlp_A 2rlq_A
Probab=99.97 E-value=7.9e-31 Score=268.75 Aligned_cols=164 Identities=21% Similarity=0.471 Sum_probs=129.7
Q ss_pred CCCCCCCCCCCccceecC---CCCe----eeEEeCCCCeeccCCcCCCCceEecccCCeeecCCCC--ccCCcCCCCCCC
Q psy833 117 NFCRVPTPGAEYGNFLDT---RYQS----SFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLR--CEGPVCSDPGRP 187 (642)
Q Consensus 117 ~~C~~~~~~p~nG~~~~~---~~~~----~~~~~C~~Gy~l~g~~~~~~~~~~C~~~G~Ws~~~p~--C~~~~C~~p~~~ 187 (642)
..|. .++.+.|+.+... ...| ...|+|++||.|.|.. .++|. +|.|+...|. |+++.|+.|+.+
T Consensus 6 ~~C~-~pp~~~n~~i~~g~~~~~~~~~g~~~~y~C~~Gy~l~G~~-----~~~C~-~g~Ws~~~P~~~C~~~~C~~p~~~ 78 (277)
T 2wii_C 6 EDCN-ELPPRRNTEILTGSWSDQTYPEGTQAIYKCRPGYRSLGNI-----IMVCR-KGEWVALNPLRKCQKRPCGHPGDT 78 (277)
T ss_dssp --CC-SCCCCCSSEEECSCCCCSSCCTTCEEEEEECTTEECSSCE-----EEEEC-SSSEEESCSSCCCEECBCCCCCCC
T ss_pred ccCc-CCCCCccccccccccccCCcCCCCEEEEEcCCCCcCCCCc-----eEEcC-CCeeeCCCCCccccccCCcCCCCC
Confidence 4676 4455666655431 1122 2399999999999999 99996 8999998765 999999999999
Q ss_pred CCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceecCcCCCCCCCC
Q psy833 188 VDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPV 267 (642)
Q Consensus 188 ~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~ 267 (642)
.||.+. +.. + ..|.+|++|+|+|++||+|.|.+. .++|+.+| |++..|.|+.+.|+.|+.+.
T Consensus 79 ~nG~~~------~~~-----~--~~~~~g~~v~y~C~~Gy~l~G~~~----~r~C~~~g-Ws~~~P~C~~~~C~~p~~~~ 140 (277)
T 2wii_C 79 PFGTFT------LTG-----G--NVFEYGVKAVYTCNEGYQLLGEIN----YRECDTDG-WTNDIPICEVVKCLPVTAPE 140 (277)
T ss_dssp TTEEEE------EES-----S--SSSBTTCEEEEEECTTEEEESSCC----EEEBCSSS-BCSCCCEEEECEECCCCCCT
T ss_pred CCCEEE------ecC-----C--CcccCCCEEEEEcCCCceEeCCCc----eeEeCCCC-cCCCCCcccceeCCCCCccc
Confidence 999832 211 1 358999999999999999999864 24999999 99999999999999999999
Q ss_pred CcEEEcc---CCccccccCCCCCEEEEEccCCCeEEeCCCceeeCC
Q psy833 268 DGYQVAT---SYEQVRYDDEQGSEVQFGCNKPGYILINPRPITCVR 310 (642)
Q Consensus 268 ~g~~~~~---~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~~ 310 (642)
||.+... ....+. +|++|+|+|+ +||.|.|+..++|+.
T Consensus 141 nG~~~~~~~~~~~~~~----~g~~v~y~C~-~Gy~L~G~~~~~C~~ 181 (277)
T 2wii_C 141 NGKIVSSAMEPDREYH----FGQAVRFVCN-SGYKIEGDEEMHCSD 181 (277)
T ss_dssp TEECCSSSSCTTCCEE----TTBEEECEEC-TTEEEESCSEEEBCT
T ss_pred CCeEEecccccCCccc----CCCEEEEEcC-CCccCcCCCCCEECC
Confidence 9998763 112222 9999999999 999999988888876
No 14
>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of complement pathway, regulator of complement; 2.2A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A 2qzh_A 2qzf_A
Probab=99.97 E-value=1.3e-30 Score=263.89 Aligned_cols=164 Identities=18% Similarity=0.336 Sum_probs=133.5
Q ss_pred CCCCCCCCCCccceecCC-CCee----eEEeCCCCeecc-CC-cCCCCceEecccCCeeecCCCCccCCcCCCCCCCCCc
Q psy833 118 FCRVPTPGAEYGNFLDTR-YQSS----FFFGCQDTFKLA-GQ-TDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDG 190 (642)
Q Consensus 118 ~C~~~~~~p~nG~~~~~~-~~~~----~~~~C~~Gy~l~-g~-~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~~g 190 (642)
.|. .++.++||.+.... ..|. +.|+|++||.|. |. . .++|+++|+|+...|.|++ .|+.|+.+.||
T Consensus 3 ~C~-~Pp~i~ng~~~~~~~~~~~~g~~v~y~C~~Gy~~~~G~~~-----~~~C~~~g~Ws~~~p~C~~-~C~~p~~~~~g 75 (254)
T 1ok3_A 3 DCG-LPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKD-----SVICLKGSQWSDIEEFCNR-SCEVPTRLNSA 75 (254)
T ss_dssp EEC-SCCCCTTEEECCTTCSCEETTCEEEEEECTTCEECTTSCC-----EEEEETTTEECCCCCCEEC-CCCSCCCCSSE
T ss_pred CCC-CCCcCCcceecCCcCcccCCCCEEEEEcCCCcEeCCCCCC-----EEEeCCCCCCCCCCCcCCC-CCCCCCCCCcc
Confidence 566 45778899876532 2332 399999999976 64 6 8999999999999999985 69999999999
Q ss_pred eeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceecCcCCCCCCCCCcE
Q psy833 191 YQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGY 270 (642)
Q Consensus 191 ~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~~g~ 270 (642)
.+.. .+ .....|.+|++|+|+|+.||+|.|... ..++|+++|+|+...|.|+++.|+.|+.+.||.
T Consensus 76 ~~~~------~~-----~~~~~~~~g~~~~y~C~~Gy~l~g~~~---~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~ 141 (254)
T 1ok3_A 76 SLKQ------PY-----ITQNYFPVGTVVEYECRPGYRREPSLS---PKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQ 141 (254)
T ss_dssp EECT------TG-----GGCCCCCTTCEEEEEECTTEEECTTSC---CEEEBCTTSCBCCCCCSEEECBCCCCCCCTTEE
T ss_pred cccc------cc-----cccCcCCCCCEEEEEeCCCceeCCCCC---CeEEECCCCeECCCCCeeCccCCcCCCCCCCCE
Confidence 7221 00 001347899999999999999998422 258999999999999999999999999999999
Q ss_pred EEcc-CCccccccCCCCCEEEEEccCCCeEEeCCCceeeCC
Q psy833 271 QVAT-SYEQVRYDDEQGSEVQFGCNKPGYILINPRPITCVR 310 (642)
Q Consensus 271 ~~~~-~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~~ 310 (642)
+... .+. +|++|+|+|+ +||+|+|+..++|+.
T Consensus 142 ~~~~~~~~-------~g~~v~~~C~-~Gy~l~G~~~~~C~~ 174 (254)
T 1ok3_A 142 IDVPGGIL-------FGATISFSCN-TGYKLFGSTSSFCLI 174 (254)
T ss_dssp EECTTCSB-------TTCEEEEEEC-TTEEEESCSEEEEEE
T ss_pred EEcCCCcE-------EcCEEEEECC-CCceeCCCcceEEEe
Confidence 9863 344 9999999999 999999999999976
No 15
>3iyp_F Complement decay-accelerating factor; virus, receptor, complex, echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo sapiens}
Probab=99.97 E-value=3.5e-30 Score=274.33 Aligned_cols=245 Identities=17% Similarity=0.288 Sum_probs=180.5
Q ss_pred CCCCCCCCCCCCccceecCC-CCee----eEEeCCCCeecc-C-CcCCCCceEecccCCeeecCCCCccCCcCCCCCCCC
Q psy833 116 RNFCRVPTPGAEYGNFLDTR-YQSS----FFFGCQDTFKLA-G-QTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPV 188 (642)
Q Consensus 116 ~~~C~~~~~~p~nG~~~~~~-~~~~----~~~~C~~Gy~l~-g-~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~ 188 (642)
...|. .++.+.||.+.... ..|. +.|+|++||.|. | .. .++|+++|+|+...|.|++ .|..|+.+.
T Consensus 33 ~~~C~-~PP~i~ng~~~~~~~~~y~~G~~v~y~C~~Gy~l~~G~~~-----~~~C~~dG~Ws~~~p~C~~-~C~~P~~~~ 105 (381)
T 3iyp_F 33 WQDCG-LPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKD-----SVICLKGSQWSDIEEFCNR-SCEVPTRLN 105 (381)
T ss_dssp -CEEC-SCCCCTTEEECCTTCSCEETTCEEEEEECTTEEECTTSCC-----EEEEETTTEECCCCCCEEE-BCCSCCCCS
T ss_pred cccCc-CCCCCCCCEEecCCCccccCCCEEEEEcCCCCEecCCCCC-----eEEECCCCcccccCCcccc-cCCCCcccc
Confidence 35687 55788999986542 2332 399999999987 6 46 8999999999999999997 799999888
Q ss_pred CceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceecCcCCCCCCCCC
Q psy833 189 DGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVD 268 (642)
Q Consensus 189 ~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~~ 268 (642)
||.+... +.....|.+|++|.|+|+.||.|.|... ..++|+++|.|+...|.|+.+.|+.|+.+.|
T Consensus 106 ~g~~~~~-----------~~~~~~~~~Gs~v~y~C~~GY~l~g~~~---~~~tC~~~g~Ws~~~p~C~~~~C~~p~~~~n 171 (381)
T 3iyp_F 106 SASLKQP-----------YITQNYFPVGTVVEYECRPGYRREPSLS---PKLTCLQNLKWSTAVEFCKKKSCPNPGEIRN 171 (381)
T ss_dssp SEEECTT-----------GGGCCCCBTTCEEEEEECTTEEECTTSC---CEEEBCTTSCBCCCCCSEEECBCCCCCCCTT
T ss_pred CCccccc-----------ccCCCcccCCCEEEEEcCCCcccCCCCC---ceEEecCCCcCcccCceeccccCCCCCccCC
Confidence 8872210 0111348999999999999999998422 2589999999999999999999999999999
Q ss_pred cEEEcc-CCccccccCCCCCEEEEEccCCCeEEeCCCceeeCCCCceEEecCCCCCCccCCCCCCCccCCCcCceecccc
Q psy833 269 GYQVAT-SYEQVRYDDEQGSEVQFGCNKPGYILINPRPITCVREPECKIIKPLGLASGRIPDSSINATSESPYLVRVNAC 347 (642)
Q Consensus 269 g~~~~~-~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~~~P~C~~v~p~~~~~g~~~~~~~~~~~~~~~y~~~~~~ 347 (642)
|.+... .+. +|++|+|+|+ +||+|+|+..++|+.+
T Consensus 172 G~~~~~~~~~-------~Gs~v~y~C~-~GY~L~G~~~~~C~~~------------------------------------ 207 (381)
T 3iyp_F 172 GQIDVPGGIL-------FGATISFSCN-TGYKLFGSTSSFCLIS------------------------------------ 207 (381)
T ss_dssp EEEECSSCSB-------TTCEEEEEEC-TTEEEESCSEEEEEEE------------------------------------
T ss_pred CceecCCCcC-------cCCEEEEEeC-CCcccCCccceEEecC------------------------------------
Confidence 999864 344 9999999999 9999999999999862
Q ss_pred cCCCCCCCcccccccccceeeeccCC-cccCccce--eEEeeEEeeceecccccccceeeeeeEeeccccceEEeeccce
Q psy833 348 SVPLIPGPRVQELLAEKNVRLFNVLR-TLANMEVY--VYRLAILVKGVVTNDIVGRPTEIRFFYKQAESENFVVYFPNFN 424 (642)
Q Consensus 348 ~~~~~~g~~~~~~l~g~~~~~c~~~g-Ws~~~p~c--v~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~ 424 (642)
| .++ |++..|.| +.|. .+....
T Consensus 208 ---------------G-------~~~~Ws~~~P~C~~v~C~------~p~~~~--------------------------- 232 (381)
T 3iyp_F 208 ---------------G-------SSVQWSDPLPECREIYCP------APPQID--------------------------- 232 (381)
T ss_dssp ---------------T-------TEEEESSCCCEEEECBCC------CCCCCT---------------------------
T ss_pred ---------------C-------CcceEcCCCCeeeeeecC------CCCCCC---------------------------
Confidence 0 022 88888888 4452 111111
Q ss_pred eccCCCCCccCcccccCccceeeeeEEeeEEEEEeCcccceeecc-----cCC---CCCcCcccccCCCCCCcCCC----
Q psy833 425 LTMRDPGNYGELAMITLPKFVQARFVILGIVSYMDNACLKFELMG-----CEE---PKVEPLLGYDYGYSPCVDNE---- 492 (642)
Q Consensus 425 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~C~~~~gf~l~G-----C~~---~g~~~~~~Ws~~~P~C~d~~---- 492 (642)
+|.... .+..|.+|+.|+|+|++ ||+|.| |++ +| +|++..|+|++..
T Consensus 233 -----nG~~~~---------~~~~y~~g~~v~y~C~~--Gy~L~G~~~~~C~~~~~~G-----~Ws~~~P~C~~~~~~~~ 291 (381)
T 3iyp_F 233 -----NGIIQG---------ERDHYGYRQSVTYACNK--GFTMIGEHSIYCTVNNDEG-----EWSGPPPECRGKSLTSK 291 (381)
T ss_dssp -----TEEEET---------CCSCCBTTCEEEEEECT--TCEEESCSEEEEECTTSSC-----EESSCCCEEEC------
T ss_pred -----CCeEec---------CCCCeecCCEEEEEeCC--CCEeCCCCcEEecccCCCC-----EEcCCCCeEeCCCCCCC
Confidence 111110 12357889999999999 999999 995 56 9999999999853
Q ss_pred -CCeeecCCCC
Q psy833 493 -PPVFQNCPQQ 502 (642)
Q Consensus 493 -pP~~~~CP~~ 502 (642)
||.+ .+|..
T Consensus 292 ~pP~~-~~~~~ 301 (381)
T 3iyp_F 292 VPPTV-QKPTT 301 (381)
T ss_dssp -----------
T ss_pred CcCCC-CCCcc
Confidence 4555 55544
No 16
>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR, CCP, immune system; NMR {Rattus norvegicus}
Probab=99.96 E-value=3.6e-29 Score=262.12 Aligned_cols=250 Identities=19% Similarity=0.346 Sum_probs=193.7
Q ss_pred ccccCCCCCeecCCCCCCcccCC-CCcccCCCCCCCCCCCCCCCCceeeccCCCCCCCCCCCCCCCCCccceecCCC-C-
Q psy833 61 ECVPVCGYGTYSPTGLVPCLECP-RNSYTGEPPVGGHKDCEACPANMFTYQPAAPARNFCRVPTPGAEYGNFLDTRY-Q- 137 (642)
Q Consensus 61 ~C~~~C~~G~y~~~g~~~C~~C~-~G~y~~~~p~~g~~~C~~Cp~G~~~~~~~~~s~~~C~~~~~~p~nG~~~~~~~-~- 137 (642)
.|.-.|.+||...... ..|. .|.|.... ..|. ...|. .+..|.||.+..... .
T Consensus 30 ~~~y~C~~Gy~~~~~~---~~C~~~g~Ws~~~-----p~C~---------------~~~C~-~p~~~~nG~~~~~~~~~~ 85 (320)
T 1ntj_A 30 SLKYECRPGYIKRQFS---ITCEVNSVWTSPQ-----DVCI---------------RKQCE-TPLDPQNGIVHVNTDIRF 85 (320)
T ss_pred EEEEEcCCCCCCCCCe---EEECCCCEECCCC-----Cccc---------------cccCc-CCCCCCCCEEECCCCccc
Confidence 4555788998532112 3443 67787542 3455 35676 456789999876422 1
Q ss_pred -eeeEEeCCCCeeccCCcCCCCceEecccCC---eeecCCCCccCCcCCCCCCCCCceeeecceeeeeeCCcCCCCcccc
Q psy833 138 -SSFFFGCQDTFKLAGQTDKNDNVVRCQANG---IWDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDT 213 (642)
Q Consensus 138 -~~~~~~C~~Gy~l~g~~~~~~~~~~C~~~G---~Ws~~~p~C~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~ 213 (642)
....|+|++||+|.|.. .++|+.+| .|+...|.|+++.|+.|+.+.||.+... ....|
T Consensus 86 g~~~~y~C~~Gy~l~G~~-----~~~C~~~g~~~~Ws~~~P~C~~~~C~~p~~~~nG~~~~~-------------~~~~~ 147 (320)
T 1ntj_A 86 GSSITYTCNEGYRLIGSS-----SAMCIISDQSVAWDAEAPICESIPCEIPPSIPNGDFFSP-------------NREDF 147 (320)
T ss_pred CCEEEEEcCCCCEECCCC-----ceEEEeCCCCeeeCCCCCcCcCCCCCCCCCCCCCcEecC-------------CCCcc
Confidence 22399999999999999 99999988 8999999999999999999999983321 11358
Q ss_pred ccCcEEEEEcccC------ccccCCccCCCceEEeccC----CeecCCCCceec-CcCCCCCCCCCcEEEccCCcccccc
Q psy833 214 RYQSSFFFGCQDT------FKLAGQTDKNDNVVRCQAN----GIWDFGDLRCEG-PVCSDPGRPVDGYQVATSYEQVRYD 282 (642)
Q Consensus 214 ~~gs~~~~~C~~G------y~l~G~~~~~~~~~~C~~~----G~Ws~~~P~C~~-~~C~~p~~~~~g~~~~~~~~~~~~~ 282 (642)
.+|++|+|+|++| |.|.|.+. ++|+++ |+|++..|.|+. +.|+.| .+.||.+.......+.
T Consensus 148 ~~g~~v~y~C~~G~~~~~~y~l~G~~~-----~~C~~~~~~~G~Ws~~~P~C~~~~~C~~p-~~~ng~~~~~~~~~~~-- 219 (320)
T 1ntj_A 148 HYGMVVTYQCNTDARGKKLFNLVGEPS-----IHCTSIDGQVGVWSGPPPQCIELNKCTPP-HVENAVIVSKNKSLFS-- 219 (320)
T ss_pred ccCCEEEEECCCCCCCcceEEEeCCCc-----eEEecCCCCCCEECCCCccccccCCCCCC-CCCCCeEeCCCCCccc--
Confidence 9999999999999 99999975 899987 999999999996 689874 6789988753222222
Q ss_pred CCCCCEEEEEccCCCeEEeCCCceeeCC-------CCceEEe-cC---C-CCCCccCCC------CCCCccCCCcCceec
Q psy833 283 DEQGSEVQFGCNKPGYILINPRPITCVR-------EPECKII-KP---L-GLASGRIPD------SSINATSESPYLVRV 344 (642)
Q Consensus 283 ~~~gs~~~~~C~~~Gy~l~G~~~~~C~~-------~P~C~~v-~p---~-~~~~g~~~~------~~~~~~~~~~~y~~~ 344 (642)
+|++|+|+|+ +||.|.|+..++|+. .|.|+++ .+ + .+.||.+.. ...+.+.|++||
T Consensus 220 --~g~~v~f~C~-~Gy~l~G~~~~~C~~~g~Ws~~~P~C~~~~~C~~p~~~~~ng~~~~~~~~~~g~~v~~~C~~Gy--- 293 (320)
T 1ntj_A 220 --LRDMVEFRCQ-DGFMMKGDSSVYCRSLNRWEPQLPSCFKVKSCGAFLGELPNGHVFVPQNLQLGAKVTFVCNTGY--- 293 (320)
T ss_pred --CCCEEEEECC-CCCeECCCCCcEECCCCeECCCCCeeEcccccCCCCCCCCCCeEecCCCcccCCEEEEEcCCCC---
Confidence 9999999999 999999999999996 4899987 32 2 567776531 234678899999
Q ss_pred ccccCCCCCCCcccccccccceeeeccCC----cccCccce
Q psy833 345 NACSVPLIPGPRVQELLAEKNVRLFNVLR----TLANMEVY 381 (642)
Q Consensus 345 ~~~~~~~~~g~~~~~~l~g~~~~~c~~~g----Ws~~~p~c 381 (642)
.|.|...++|..+| |++.+|+|
T Consensus 294 ---------------~l~G~~~~~C~~~G~~~~Ws~~~P~C 319 (320)
T 1ntj_A 294 ---------------QLKGNSSSHCVLDGVESIWNSSVPVC 319 (320)
T ss_pred ---------------EECCCCcCEeeCCCCcCccCCCCCcc
Confidence 78999999999766 99999988
No 17
>1rid_A Complement control protein; regulation, SCR, immune system; HET: IDS SGN; 2.10A {Vaccinia virus} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1g44_A 1g40_A* 1y8e_A* 1e5g_A 1vvc_A 1vvd_A 1vve_A
Probab=99.96 E-value=1.7e-29 Score=254.15 Aligned_cols=209 Identities=19% Similarity=0.356 Sum_probs=174.3
Q ss_pred CCCCCCCCCccceecCC-----CCee----eEEeCCCCeeccCC--cCCCCceEecccCCeeecCCCCccCCcCCCCCCC
Q psy833 119 CRVPTPGAEYGNFLDTR-----YQSS----FFFGCQDTFKLAGQ--TDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRP 187 (642)
Q Consensus 119 C~~~~~~p~nG~~~~~~-----~~~~----~~~~C~~Gy~l~g~--~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~ 187 (642)
|. .++.+.|+.+.... ..|. ..|+|++||.|.|. . .++| .+|.|+.. |.|+++.|+.|+.+
T Consensus 2 C~-~PP~~~n~~~~~~~~~~~~~~~~~g~~~~y~C~~Gy~~~g~~~~-----~~~C-~~g~Ws~~-p~C~~~~C~~p~~~ 73 (244)
T 1rid_A 2 CT-IPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPI-----YAKC-TGTGWTLF-NQCIKRRCPSPRDI 73 (244)
T ss_dssp CC-CCCCCSSSCBCCSSCCCSSCCCSSCCEECCBCCTTCEECSSCSS-----SEEE-ETTEEESC-CCEECCCCCCCCCC
T ss_pred cC-CCCCCCccEecCCccccccCccCCCCEEEEEeCCCCeEcCCCCC-----eEEc-CCCcCCCC-CeeeeCCCcCCCCC
Confidence 55 45677788876542 2232 28999999999976 7 8999 99999976 99999999999999
Q ss_pred CCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccC----CeecCCCCceecCcCCCC
Q psy833 188 VDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQAN----GIWDFGDLRCEGPVCSDP 263 (642)
Q Consensus 188 ~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~----G~Ws~~~P~C~~~~C~~p 263 (642)
.||.+.. ..+.+|++|+|+|++||+|.|.+. ++|+.+ |+|++..|.|+++.|+.|
T Consensus 74 ~nG~~~~----------------~~~~~g~~~~y~C~~Gy~l~G~~~-----~~C~~~~g~~g~Ws~~~p~C~~~~C~~p 132 (244)
T 1rid_A 74 DNGQLDI----------------GGVDFGSSITYSCNSGYHLIGESK-----SYCELGSTGSMVWNPEAPICESVKCQSP 132 (244)
T ss_dssp SSCBCCC----------------CCCSSCCCBCCBCCSSCEESSCSS-----BCBCCSSSSCCSBSSCSCCEESSCCCSC
T ss_pred CCCEEeC----------------CCcccCCEEEEECCCCCeECCCcc-----eEEECCCCCccccCCCCCeeccCcCcCC
Confidence 9998221 347899999999999999999865 899877 799999999999999999
Q ss_pred CCCCCcEEEcc--CCccccccCCCCCEEEEEccCCCeEEeCCCceeeCC-----CCceEEec--CCCCCCccCCC-----
Q psy833 264 GRPVDGYQVAT--SYEQVRYDDEQGSEVQFGCNKPGYILINPRPITCVR-----EPECKIIK--PLGLASGRIPD----- 329 (642)
Q Consensus 264 ~~~~~g~~~~~--~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~~-----~P~C~~v~--p~~~~~g~~~~----- 329 (642)
+.+.||.+... .+. +|++|+|+|+ +||.|+|+..++|+. .|.|+++. ++.+.||.+..
T Consensus 133 ~~~~nG~~~~~~~~~~-------~g~~v~y~C~-~Gy~l~G~~~~~C~~g~Ws~~P~C~~~~C~~p~~~ng~~~~~~~~~ 204 (244)
T 1rid_A 133 PSISNGRHNGYEDFYT-------DGSVVTYSCN-SGYSLIGNSGVLCSGGEWSDPPTCQIVKCPHPTISNGYLSSGFKRS 204 (244)
T ss_dssp CCCSSCEECCSSSSCC-------SSCCBCEECC-SSCEEECSSSBCCSSSCCCSCCEEESCCCCCCCCSSCBCCSSCCSS
T ss_pred CCCCCCEEecCCCcee-------cCCeEEEEeC-CCCeeCCCCceEECCCccCCCCeeeeeeCcCCCCcCCeeccCCCCc
Confidence 99999999732 233 9999999999 999999999999996 69999886 45667776532
Q ss_pred ---CCCCccCCCcCceecccccCCCCCCCcccccccccceeeeccCC-cccCcccee
Q psy833 330 ---SSINATSESPYLVRVNACSVPLIPGPRVQELLAEKNVRLFNVLR-TLANMEVYV 382 (642)
Q Consensus 330 ---~~~~~~~~~~~y~~~~~~~~~~~~g~~~~~~l~g~~~~~c~~~g-Ws~~~p~cv 382 (642)
.....+.|++|| .|.|...++|..+| |++.+|+|+
T Consensus 205 ~~~g~~v~~~C~~Gy------------------~l~G~~~~~C~~~g~Ws~~~P~C~ 243 (244)
T 1rid_A 205 YSYNDNVDFKCKYGY------------------KLSGSSSSTCSPGNTWKPELPKCV 243 (244)
T ss_dssp CCSCCCCCCBCSSSC------------------EEESCSCCEEETTTEEESCCCEEE
T ss_pred ccCCCEEEEEcCCCC------------------EECCCCCeEECCCCeECCCCCEee
Confidence 234678899999 78999999999999 999999983
No 18
>2c8i_E CD55, complement decay-accelerating factor; picornavirus, DAF, virus-receptor complex, antigen, blood group antigen, complement pathway, GPI-anchor; 14.00A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1
Probab=99.96 E-value=1.1e-28 Score=258.02 Aligned_cols=255 Identities=16% Similarity=0.259 Sum_probs=195.2
Q ss_pred ccccCCCCCeecCCCCCCcccCCC-CcccCCCCCCCCCCCCCCCCceeeccCCCCCCCCCCCCCCCCCccceecCC-CCe
Q psy833 61 ECVPVCGYGTYSPTGLVPCLECPR-NSYTGEPPVGGHKDCEACPANMFTYQPAAPARNFCRVPTPGAEYGNFLDTR-YQS 138 (642)
Q Consensus 61 ~C~~~C~~G~y~~~g~~~C~~C~~-G~y~~~~p~~g~~~C~~Cp~G~~~~~~~~~s~~~C~~~~~~p~nG~~~~~~-~~~ 138 (642)
.|.-.|..||....|...-+.|.. |.|....| .|.. ...|. .++.+.||.+.... ..|
T Consensus 27 ~v~y~C~~Gy~l~~G~~~~~~C~~~g~Ws~~~p-----~C~~--------------~~~C~-~pp~~~ng~~~~~~~~~~ 86 (316)
T 2c8i_E 27 VITYKCEESFVKIPGEKDSVICLKGSQWSDIEE-----FCNR--------------SQDCG-LPPDVPNAQPALEGRTSF 86 (316)
T ss_pred EEEEEcCCCcEeccCCcceEEecCCCcCCCCCc-----cccc--------------CCcCC-CCCCCCCCEEcCCCCccc
Confidence 354578899987554322244544 67875432 4531 24576 44667888876532 222
Q ss_pred ----eeEEeCCCCeecc-CC-cCCCCceEecccCCeeecCCCCccCCcCCCCCCCCCceeeecceeeeeeCCcCCCCccc
Q psy833 139 ----SFFFGCQDTFKLA-GQ-TDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLD 212 (642)
Q Consensus 139 ----~~~~~C~~Gy~l~-g~-~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~ 212 (642)
.+.|+|++||.|. |. . .++|+++|.|+...|.|++ .|+.|+.+.||.+.. .+ .....
T Consensus 87 ~~g~~v~y~C~~Gy~~~~G~~~-----~~~C~~~G~Ws~~~p~C~~-~C~~p~~~~~g~~~~------~~-----~~~~~ 149 (316)
T 2c8i_E 87 PEDTVITYKCEESFVKIPGEKD-----SVICLKGSQWSDIEEFCNR-SCEVPTRLNSASLKQ------PY-----ITQNY 149 (316)
T ss_pred CCCCEEEEEeCCCCcccCCCCC-----eEEECCCCcCCCCCCcccc-CCCCccccccceeec------cc-----ccCCc
Confidence 2399999999976 75 5 8999999999999999985 699999888987221 10 01134
Q ss_pred cccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceecCcCCCCCCCCCcEEEcc-CCccccccCCCCCEEEE
Q psy833 213 TRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGYQVAT-SYEQVRYDDEQGSEVQF 291 (642)
Q Consensus 213 ~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~~g~~~~~-~~~~~~~~~~~gs~~~~ 291 (642)
|.+|++|+|+|++||.|.|... ..++|+++|+|+...|.|+++.|+.|+.+.||.+... .+. +|++|+|
T Consensus 150 ~~~g~~~~y~C~~Gy~l~g~~~---~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~~~~~-------~g~~~~~ 219 (316)
T 2c8i_E 150 FPVGTVVEYECRPGYRREPSLS---PKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGGIL-------FGATISF 219 (316)
T ss_pred cCCCCEEEEEcCCCceECCCCC---ceEEECCCCcCCCCCCceeeeeCcCCCCcCCCEEEcCCCce-------eCCEEEE
Confidence 7899999999999999998422 2589999999999999999999999999999999863 344 9999999
Q ss_pred EccCCCeEEeCCCceeeCC----------CCceEEec---CCCCCCccCCC-------CCCCccCCCcCceecccccCCC
Q psy833 292 GCNKPGYILINPRPITCVR----------EPECKIIK---PLGLASGRIPD-------SSINATSESPYLVRVNACSVPL 351 (642)
Q Consensus 292 ~C~~~Gy~l~G~~~~~C~~----------~P~C~~v~---p~~~~~g~~~~-------~~~~~~~~~~~y~~~~~~~~~~ 351 (642)
+|+ +||+|+|+..++|+. .|.|++|. |+.+.||.+.. ...+.+.|++||
T Consensus 220 ~C~-~Gy~l~G~~~~~C~~~g~~~~Ws~~~P~C~~i~C~~p~~~~nG~~~~~~~~~~~g~~v~~~C~~gy---------- 288 (316)
T 2c8i_E 220 SCN-TGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGF---------- 288 (316)
T ss_pred EeC-CcceECCCccEEEecCCCcccccCCCCccccccCCCCCccCcceEecCCCcccCCCEEEEEcCCCC----------
Confidence 999 999999999999984 49999997 45677887653 234678899999
Q ss_pred CCCCcccccccccceeeecc---CC-cccCccce
Q psy833 352 IPGPRVQELLAEKNVRLFNV---LR-TLANMEVY 381 (642)
Q Consensus 352 ~~g~~~~~~l~g~~~~~c~~---~g-Ws~~~p~c 381 (642)
.|.|...++|.. +| |++.+|+|
T Consensus 289 --------~l~G~~~~~C~~~~~~g~Ws~~~P~C 314 (316)
T 2c8i_E 289 --------TMIGEHSIYCTVNNDEGEWSGPPPEC 314 (316)
T ss_pred --------eEcCCCceEeecCCCCCeECCCCCee
Confidence 889999999985 58 99999998
No 19
>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat, sushi, complement control protein, N glycosylation, multi-domain, membrane adhesion; HET: NAG MAN; 2.70A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A
Probab=99.96 E-value=1.5e-28 Score=257.04 Aligned_cols=209 Identities=24% Similarity=0.489 Sum_probs=165.1
Q ss_pred ccccCCCCCeecCCCCCCcccCC-CCcccCCCCCCCCCCCCCCCCceeeccCCCCCCCCCCCCCCCCCccceecCCCCe-
Q psy833 61 ECVPVCGYGTYSPTGLVPCLECP-RNSYTGEPPVGGHKDCEACPANMFTYQPAAPARNFCRVPTPGAEYGNFLDTRYQS- 138 (642)
Q Consensus 61 ~C~~~C~~G~y~~~g~~~C~~C~-~G~y~~~~p~~g~~~C~~Cp~G~~~~~~~~~s~~~C~~~~~~p~nG~~~~~~~~~- 138 (642)
.+.-.|..||....+.. -..|. .|.|.... ..|. ...|+ .+..+.||.+......+
T Consensus 27 ~~~y~C~~Gy~l~g~~~-~~~C~~~G~Ws~~~-----p~C~---------------~~~C~-~p~~~~nG~~~~~~~~~g 84 (319)
T 1qub_A 27 EITYSCKPGYVSRGGMR-KFICPLTGLWPINT-----LKCT---------------PRVCP-FAGILENGAVRYTTFEYP 84 (319)
T ss_dssp EEEEEECTTEEETTSCE-EEECCTTSCCCCCC-----CCEE---------------ECBCC-CCCCCTTEEEECSCSBTT
T ss_pred EEEEEECCCCeEcCCCc-eEEECCCCEECCCC-----CeEC---------------ccCCc-CCCCCCCccEecCCcccC
Confidence 45557889998865432 23454 67787542 3565 35677 55678999998653322
Q ss_pred -eeEEeCCCCeeccCCcCCCCceEecccCCeeecCCCCccCCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCc
Q psy833 139 -SFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQS 217 (642)
Q Consensus 139 -~~~~~C~~Gy~l~g~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs 217 (642)
...|+|++||.|.|+. .++|+++|+|+...|.|+.+.|+.|+.+.||.+.. ... ..+ ..+.+|+
T Consensus 85 ~~v~~~C~~Gy~l~G~~-----~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~~g~~~~------~~~--~~~--~~~~~g~ 149 (319)
T 1qub_A 85 NTISFSCNTGFYLNGAD-----SAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRV------YKP--SAG--NNSLYRD 149 (319)
T ss_dssp CEEEEEECTTEEEESCS-----EEEECTTSCEESCCCEEEECEECCCCCCTTEEEEE------CCC--SBT--TBEETTC
T ss_pred CEEEEECCCCceeCCCC-----ceEECCCCeECCCCCCCccCcCCCCCCCCCceEEe------ccc--CCC--CceecCC
Confidence 3399999999999999 99999999999999999999999999999998322 100 001 3478999
Q ss_pred EEEEEcccCccccCCccCCCceEEeccCCeecCCCCceecCcCCCCCCCCCcEEEccCCccccccCCCCCEEEEEccCCC
Q psy833 218 SFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQGSEVQFGCNKPG 297 (642)
Q Consensus 218 ~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~~g~~~~~~~~~~~~~~~~gs~~~~~C~~~G 297 (642)
+|+|+|++||.|.|+.. ++|+++|+|+. .|.|+++.|+.|+.+.||.+.......+. +|++|+|+|+ +|
T Consensus 150 ~v~y~C~~Gy~l~G~~~-----~~C~~~G~Ws~-~P~C~~v~C~~p~~~~nG~~~~~~~~~~~----~g~~v~~~C~-~G 218 (319)
T 1qub_A 150 TAVFECLPQHAMFGNDT-----ITCTTHGNWTK-LPECREVKCPFPSRPDNGFVNYPAKPTLY----YKDKATFGCH-DG 218 (319)
T ss_dssp EEEEEECTTEEEESCSE-----EEBCTTSSBSC-CCEEEECEECCCCCCTTEEEECCSCSSEE----TTCEEEEEEC-TT
T ss_pred EEEEEeCCCceecCCCe-----EEECCCCeECC-CCceeccCCCCCCCCCCCeEecCCCCccc----cCCEEEEEcC-CC
Confidence 99999999999999874 89999999997 89999999999999999999864322222 9999999999 99
Q ss_pred eEEeCCCceeeCC------CCceEEe
Q psy833 298 YILINPRPITCVR------EPECKII 317 (642)
Q Consensus 298 y~l~G~~~~~C~~------~P~C~~v 317 (642)
|.|.|+..++|+. .|.|++.
T Consensus 219 y~l~G~~~~~C~~~G~Ws~~P~C~~~ 244 (319)
T 1qub_A 219 YSLDGPEEIECTKLGNWSAMPSCKAS 244 (319)
T ss_dssp EEESSCSEEEBCTTSSBSCCCCEEEC
T ss_pred CEECCCCCeEECCCCcCCCCCCccCc
Confidence 9999999999996 4888874
No 20
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=99.96 E-value=3.6e-28 Score=273.33 Aligned_cols=252 Identities=18% Similarity=0.304 Sum_probs=197.8
Q ss_pred ccccCCCCCeecCCCCCCcccCCCCcccCCCCCCCCCCCCCCCCceeeccCCCCCCCCCCCCCCCCCccceecCCC---C
Q psy833 61 ECVPVCGYGTYSPTGLVPCLECPRNSYTGEPPVGGHKDCEACPANMFTYQPAAPARNFCRVPTPGAEYGNFLDTRY---Q 137 (642)
Q Consensus 61 ~C~~~C~~G~y~~~g~~~C~~C~~G~y~~~~p~~g~~~C~~Cp~G~~~~~~~~~s~~~C~~~~~~p~nG~~~~~~~---~ 137 (642)
.|.-.|.+||+.......|+ ..|.|.... ..|. ...|+ .+..+.||.+..... .
T Consensus 28 ~~~y~C~~Gy~~~~~~~~C~--~~g~Ws~~~-----p~C~---------------~~~C~-~p~~~~ng~~~~~~~~~~g 84 (551)
T 1ntl_A 28 YLLYECLPGYIKRQFSITCK--QDSTWTSAE-----DKCI---------------RKQCK-TPSDPENGLVHVHTGIEFG 84 (551)
T ss_pred EEEEEeCCCCcCCCceEEEC--CCCeECCCC-----CCcc---------------cCCCc-CCCCCCCcEEEcCCCcccC
Confidence 44447888885322222333 367787542 3455 35676 456789999876422 1
Q ss_pred eeeEEeCCCCeeccCCcCCCCceEecccCC---eeecCCCCccCCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccc
Q psy833 138 SSFFFGCQDTFKLAGQTDKNDNVVRCQANG---IWDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTR 214 (642)
Q Consensus 138 ~~~~~~C~~Gy~l~g~~~~~~~~~~C~~~G---~Ws~~~p~C~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~ 214 (642)
....|+|++||.|.|.. .++|+.+| .|+...|.|+++.|+.|+.+.||.+... ....|.
T Consensus 85 ~~~~y~C~~Gy~l~G~~-----~~~C~~~g~~~~Ws~~~p~C~~~~C~~p~~~~nG~~~~~-------------~~~~~~ 146 (551)
T 1ntl_A 85 SRINYTCNQGYRLIGSS-----SAVCVITDQSVDWDTEAPICEWIPCEIPPGIPNGDFFSS-------------TREDFH 146 (551)
T ss_pred CEEEEECCCCCEECCCc-----cEEEEeCCCcceeCCCCCCCCCCCCCCCCcCCCCcEecC-------------CCCccc
Confidence 22399999999999999 99999998 8999999999999999999999983221 013589
Q ss_pred cCcEEEEEcccC------ccccCCccCCCceEEeccC----CeecCCCCceec-CcCCCCCCCCCcEEEccCCccccccC
Q psy833 215 YQSSFFFGCQDT------FKLAGQTDKNDNVVRCQAN----GIWDFGDLRCEG-PVCSDPGRPVDGYQVATSYEQVRYDD 283 (642)
Q Consensus 215 ~gs~~~~~C~~G------y~l~G~~~~~~~~~~C~~~----G~Ws~~~P~C~~-~~C~~p~~~~~g~~~~~~~~~~~~~~ 283 (642)
+|++|+|+|++| |.|.|... ++|+.+ |+|++..|.|+. +.|+.|+.+.||.+.......+.
T Consensus 147 ~g~~v~y~C~~G~~~~~~y~l~G~~~-----~~C~~~~~~~G~Ws~~~P~C~~~~~C~~p~~~~ng~~~~~~~~~~~--- 218 (551)
T 1ntl_A 147 YGMVVTYRCNTDARGKALFNLVGEPS-----LYCTSNDGEIGVWSGPPPQCIELNKCTPPPYVENAVMLSENRSLFS--- 218 (551)
T ss_pred cCCEEEEEeCCCCCccceeEecCCcc-----eEeeCCCCcCCEECCCCCcccCccccCCCCCCCCceEeCCCCCccc---
Confidence 999999999999 99999875 899988 999999999996 68999999999998764222222
Q ss_pred CCCCEEEEEccCCCeEEeCCCceeeCC-------CCceEEe-c---CCCCCCccCC--------CCCCCccCCCcCceec
Q psy833 284 EQGSEVQFGCNKPGYILINPRPITCVR-------EPECKII-K---PLGLASGRIP--------DSSINATSESPYLVRV 344 (642)
Q Consensus 284 ~~gs~~~~~C~~~Gy~l~G~~~~~C~~-------~P~C~~v-~---p~~~~~g~~~--------~~~~~~~~~~~~y~~~ 344 (642)
+|++|+|+|+ +||.|.|+..++|+. .|.|+++ . |+.+.||.+. ......+.|++||
T Consensus 219 -~g~~v~~~C~-~Gy~l~G~~~~~C~~~g~Ws~~~P~C~~~~~C~~p~~~~~g~~~~~~~~~~~~g~~v~~~C~~Gy--- 293 (551)
T 1ntl_A 219 -LRDIVEFRCH-PGFIMKGASSVHCQSLNKWEPELPSCFKGVICRLPQEMSGFQKGLGMKKEYYYGENVTLECEDGY--- 293 (551)
T ss_pred -CCCEEEEECC-CCCEEcCCCCeEECCCCeECCCCccccccccCCCCCcCCCCccccCCCCCcccCCEEEEEcCCCc---
Confidence 8999999999 999999999999996 4999998 4 4456777654 1233567899999
Q ss_pred ccccCCCCCCCcccccccccceeeeccCC-cccCccce
Q psy833 345 NACSVPLIPGPRVQELLAEKNVRLFNVLR-TLANMEVY 381 (642)
Q Consensus 345 ~~~~~~~~~g~~~~~~l~g~~~~~c~~~g-Ws~~~p~c 381 (642)
.|.|...++|..+| |++..|.|
T Consensus 294 ---------------~l~G~~~~~C~~~g~W~~~~p~C 316 (551)
T 1ntl_A 294 ---------------TLEGSSQSQCQSDGSWNPLLAKC 316 (551)
T ss_pred ---------------EecCCcceEEeCCCeECCCCCee
Confidence 78999999999988 99999999
No 21
>3o8e_B Membrane cofactor protein; short consensus repeat, complement control protein, fiber KN virus-receptor interaction, cell adhesion-immunity complex; HET: NAG; 2.84A {Homo sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M*
Probab=99.95 E-value=9e-28 Score=242.80 Aligned_cols=201 Identities=20% Similarity=0.438 Sum_probs=159.1
Q ss_pred ccccCCCCCeecCCCCCCcccCC-CCcccCCCCCCCCCCCCCCCCceeeccCCCCCCCCCCCCCCCCCccceecCCCCee
Q psy833 61 ECVPVCGYGTYSPTGLVPCLECP-RNSYTGEPPVGGHKDCEACPANMFTYQPAAPARNFCRVPTPGAEYGNFLDTRYQSS 139 (642)
Q Consensus 61 ~C~~~C~~G~y~~~g~~~C~~C~-~G~y~~~~p~~g~~~C~~Cp~G~~~~~~~~~s~~~C~~~~~~p~nG~~~~~~~~~~ 139 (642)
.|.-.|..||........-..|. .|.|... ....|. ...|+ .++.+.||.+......+.
T Consensus 25 ~~~y~C~~Gy~~~g~~~~~~~C~~~g~Ws~~----~~p~C~---------------~~~C~-~p~~~~nG~~~~~~~~~~ 84 (252)
T 3o8e_B 25 RVDYKCKKGYFYIPPLATHTICDRNHTWLPV----SDDACY---------------RETCP-YIRDPLNGQAVPANGTYE 84 (252)
T ss_dssp EEEEEECTTEEECSSSCCEEEBCTTSSBCCC----CSTTEE---------------ECBCC-CCCCCTTEEEEETTSSSB
T ss_pred EEEEEcCCCccCCCCCCCeEEECCCCcCCCC----CCCcee---------------eeECc-CCCCCCCcEEeecCCCcc
Confidence 44447889998865212335564 6788752 123565 45676 567889999987654333
Q ss_pred ----eEEeCCCCeeccCCcCCCCceEecccCC---eeecCCCCccCCcCCCCCCCCCceeeecceeeeeeCCcCCCCccc
Q psy833 140 ----FFFGCQDTFKLAGQTDKNDNVVRCQANG---IWDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLD 212 (642)
Q Consensus 140 ----~~~~C~~Gy~l~g~~~~~~~~~~C~~~G---~Ws~~~p~C~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~ 212 (642)
..|+|++||.|.|+. .++|+.+| +|+...|.|+++.|++|+.+.||.+... ....
T Consensus 85 ~g~~~~~~C~~Gy~l~G~~-----~~~C~~~G~~~~Ws~~~P~C~~~~C~~p~~~~nG~~~~~-------------~~~~ 146 (252)
T 3o8e_B 85 FGYQMHFICNEGYYLIGEE-----ILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFS-------------EVEV 146 (252)
T ss_dssp TTCEEEEEECTTEEEESCS-----EEEEEESSSCEEESSCCCEEEECEECCCCCCTTEEESST-------------TCCC
T ss_pred CCCEEEEECCCCCeECCCC-----EEEEeCCCCCCeeCCCCCeEeeeEcCCCCCCCCCcEecc-------------CCce
Confidence 399999999999999 99999988 8999999999999999999999983321 1135
Q ss_pred cccCcEEEEEccc-----CccccCCccCCCceEEeccCCeecCCCCceecCcCCCCCCCCCcEEEccCCccccccCCCCC
Q psy833 213 TRYQSSFFFGCQD-----TFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQGS 287 (642)
Q Consensus 213 ~~~gs~~~~~C~~-----Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~~g~~~~~~~~~~~~~~~~gs 287 (642)
|.+|++|+|+|+. ||.|.|++. ++|+++|+|++..|.|+.+.|+.| .+.||.+.......+. +|+
T Consensus 147 ~~~g~~v~y~C~~g~~~~gy~l~G~~~-----~~C~~~G~Ws~~~P~C~~v~C~~P-~~~ng~~~~~~~~~~~----~g~ 216 (252)
T 3o8e_B 147 FEYLDAVTYSCDPAPGPDPFSLIGEST-----IYCGDNSVWSRAAPECKVVKCRFP-VVENGKQISGFGKKFY----YKA 216 (252)
T ss_dssp EETTCEEEEEECCCSSSSCCEEESCSE-----EEBCTTSSBSSCCCEEECCCBCCC-CCTTEEEEECCCSCBC----TTC
T ss_pred ecCCCEEEEEeCCCCCCCCeEEeCCCc-----eEECCCCeECCCCCEEeeeecCCC-cccCCcEecCCCCccc----cCC
Confidence 8999999999998 899999864 899999999999999999999977 6789987643222222 999
Q ss_pred EEEEEccCCCeEEeCCCceeeCC
Q psy833 288 EVQFGCNKPGYILINPRPITCVR 310 (642)
Q Consensus 288 ~~~~~C~~~Gy~l~G~~~~~C~~ 310 (642)
+|+|+|+ +||.|.|+..++|++
T Consensus 217 ~v~f~C~-~Gy~l~G~~~~~C~~ 238 (252)
T 3o8e_B 217 TVMFECD-KGFYLDGSDTIVCDS 238 (252)
T ss_dssp EEEEEEC-TTEEEESCSEEEECT
T ss_pred EEEEEeC-CCCEEcCCCcEEECC
Confidence 9999999 999999999999986
No 22
>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of complement pathway, regulator of complement; 2.2A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A 2qzh_A 2qzf_A
Probab=99.94 E-value=2.4e-27 Score=239.97 Aligned_cols=195 Identities=18% Similarity=0.371 Sum_probs=154.0
Q ss_pred ccccCCCCCeecCCCCCCcccCC-CCcccCCCCCCCCCCCCCCCCceeeccCCCCCCCCCCCCCCCCCccceecC---CC
Q psy833 61 ECVPVCGYGTYSPTGLVPCLECP-RNSYTGEPPVGGHKDCEACPANMFTYQPAAPARNFCRVPTPGAEYGNFLDT---RY 136 (642)
Q Consensus 61 ~C~~~C~~G~y~~~g~~~C~~C~-~G~y~~~~p~~g~~~C~~Cp~G~~~~~~~~~s~~~C~~~~~~p~nG~~~~~---~~ 136 (642)
.+.-.|..||....|...-+.|. .|.|....| .|. ..|. .++.+.||.+... ..
T Consensus 28 ~v~y~C~~Gy~~~~G~~~~~~C~~~g~Ws~~~p-----~C~----------------~~C~-~p~~~~~g~~~~~~~~~~ 85 (254)
T 1ok3_A 28 VITYKCEESFVKIPGEKDSVICLKGSQWSDIEE-----FCN----------------RSCE-VPTRLNSASLKQPYITQN 85 (254)
T ss_dssp EEEEEECTTCEECTTSCCEEEEETTTEECCCCC-----CEE----------------CCCC-SCCCCSSEEECTTGGGCC
T ss_pred EEEEEcCCCcEeCCCCCCEEEeCCCCCCCCCCC-----cCC----------------CCCC-CCCCCCcccccccccccC
Confidence 45557889998764432224454 578875432 343 2466 4456788877542 11
Q ss_pred Ce----eeEEeCCCCeeccC--CcCCCCceEecccCCeeecCCCCccCCcCCCCCCCCCceeeecceeeeeeCCcCCCCc
Q psy833 137 QS----SFFFGCQDTFKLAG--QTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNF 210 (642)
Q Consensus 137 ~~----~~~~~C~~Gy~l~g--~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~ 210 (642)
.| ...|+|++||.|.| .. .++|+.+|+|+...|.|+++.|+.|+.+.||.+. +.
T Consensus 86 ~~~~g~~~~y~C~~Gy~l~g~~~~-----~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~------~~--------- 145 (254)
T 1ok3_A 86 YFPVGTVVEYECRPGYRREPSLSP-----KLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQID------VP--------- 145 (254)
T ss_dssp CCCTTCEEEEEECTTEEECTTSCC-----EEEBCTTSCBCCCCCSEEECBCCCCCCCTTEEEE------CT---------
T ss_pred cCCCCCEEEEEeCCCceeCCCCCC-----eEEECCCCeECCCCCeeCccCCcCCCCCCCCEEE------cC---------
Confidence 22 23999999999987 56 8999999999999999999999999999999832 21
Q ss_pred cccccCcEEEEEcccCccccCCccCCCceEEeccCC---eecCCCCceecCcCCCCCCCCCcEEEcc--CCccccccCCC
Q psy833 211 LDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANG---IWDFGDLRCEGPVCSDPGRPVDGYQVAT--SYEQVRYDDEQ 285 (642)
Q Consensus 211 ~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G---~Ws~~~P~C~~~~C~~p~~~~~g~~~~~--~~~~~~~~~~~ 285 (642)
..+.+|++|+|+|++||+|.|... ++|+.+| +|++..|.|+++.|+.|+.+.||.+... .+. +
T Consensus 146 ~~~~~g~~v~~~C~~Gy~l~G~~~-----~~C~~~G~~~~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~~~-------~ 213 (254)
T 1ok3_A 146 GGILFGATISFSCNTGYKLFGSTS-----SFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYG-------Y 213 (254)
T ss_dssp TCSBTTCEEEEEECTTEEEESCSE-----EEEEEETTEEEESSCCCEEEECBCCCCCCCTTEEETTCCSCCB-------T
T ss_pred CCcEEcCEEEEECCCCceeCCCcc-----eEEEeCCCcccccCCCCccccccCCCCCCCCCceEecCCCccc-------C
Confidence 347899999999999999999874 8999998 9999999999999999999999998753 234 9
Q ss_pred CCEEEEEccCCCeEEeCCCceeeCC
Q psy833 286 GSEVQFGCNKPGYILINPRPITCVR 310 (642)
Q Consensus 286 gs~~~~~C~~~Gy~l~G~~~~~C~~ 310 (642)
|++|+|+|+ +||.|.|+..++|+.
T Consensus 214 g~~v~~~C~-~Gy~l~G~~~~~C~~ 237 (254)
T 1ok3_A 214 RQSVTYACN-KGFTMIGEHSIYCTV 237 (254)
T ss_dssp TCEEEEEEC-TTCEEEEESEEEEEE
T ss_pred CCEEEEECC-CCCeEcCCCceEEec
Confidence 999999999 999999999999974
No 23
>1rid_A Complement control protein; regulation, SCR, immune system; HET: IDS SGN; 2.10A {Vaccinia virus} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1g44_A 1g40_A* 1y8e_A* 1e5g_A 1vvc_A 1vvd_A 1vve_A
Probab=99.93 E-value=1.1e-26 Score=233.65 Aligned_cols=206 Identities=19% Similarity=0.362 Sum_probs=161.1
Q ss_pred ccccCCCCCeecCCCCCCcccCCCCcccCCCCCCCCCCCCCCCCceeeccCCCCCCCCCCCCCCCCCccceecCCCCe--
Q psy833 61 ECVPVCGYGTYSPTGLVPCLECPRNSYTGEPPVGGHKDCEACPANMFTYQPAAPARNFCRVPTPGAEYGNFLDTRYQS-- 138 (642)
Q Consensus 61 ~C~~~C~~G~y~~~g~~~C~~C~~G~y~~~~p~~g~~~C~~Cp~G~~~~~~~~~s~~~C~~~~~~p~nG~~~~~~~~~-- 138 (642)
.|.-.|.+||........-..|..|.|... ..|. ...|+ .+..+.||.+......+
T Consensus 30 ~~~y~C~~Gy~~~g~~~~~~~C~~g~Ws~~------p~C~---------------~~~C~-~p~~~~nG~~~~~~~~~g~ 87 (244)
T 1rid_A 30 TIEYLCLPGYRKQKMGPIYAKCTGTGWTLF------NQCI---------------KRRCP-SPRDIDNGQLDIGGVDFGS 87 (244)
T ss_dssp EECCBCCTTCEECSSCSSSEEEETTEEESC------CCEE---------------CCCCC-CCCCCSSCBCCCCCCSSCC
T ss_pred EEEEEeCCCCeEcCCCCCeEEcCCCcCCCC------Ceee---------------eCCCc-CCCCCCCCEEeCCCcccCC
Confidence 455689999987653122355667888743 3565 35677 55778999988732222
Q ss_pred eeEEeCCCCeeccCCcCCCCceEecccC----CeeecCCCCccCCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccc
Q psy833 139 SFFFGCQDTFKLAGQTDKNDNVVRCQAN----GIWDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTR 214 (642)
Q Consensus 139 ~~~~~C~~Gy~l~g~~~~~~~~~~C~~~----G~Ws~~~p~C~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~ 214 (642)
...|+|++||.|.|.. .++|+.+ |.|+...|.|+++.|+.|+.+.||.+... ...|.
T Consensus 88 ~~~y~C~~Gy~l~G~~-----~~~C~~~~g~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~--------------~~~~~ 148 (244)
T 1rid_A 88 SITYSCNSGYHLIGES-----KSYCELGSTGSMVWNPEAPICESVKCQSPPSISNGRHNGY--------------EDFYT 148 (244)
T ss_dssp CBCCBCCSSCEESSCS-----SBCBCCSSSSCCSBSSCSCCEESSCCCSCCCCSSCEECCS--------------SSSCC
T ss_pred EEEEECCCCCeECCCc-----ceEEECCCCCccccCCCCCeeccCcCcCCCCCCCCEEecC--------------CCcee
Confidence 2389999999999999 9999887 79999999999999999999999983311 14589
Q ss_pred cCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceecCcCCCCCCCCCcEEEccCCccccccCCCCCEEEEEcc
Q psy833 215 YQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQGSEVQFGCN 294 (642)
Q Consensus 215 ~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~~g~~~~~~~~~~~~~~~~gs~~~~~C~ 294 (642)
+|++|+|+|++||.|.|++. ++|++ |+|+ ..|.|+.+.|+.| .+.||.+.......+. +|++|+|+|+
T Consensus 149 ~g~~v~y~C~~Gy~l~G~~~-----~~C~~-g~Ws-~~P~C~~~~C~~p-~~~ng~~~~~~~~~~~----~g~~v~~~C~ 216 (244)
T 1rid_A 149 DGSVVTYSCNSGYSLIGNSG-----VLCSG-GEWS-DPPTCQIVKCPHP-TISNGYLSSGFKRSYS----YNDNVDFKCK 216 (244)
T ss_dssp SSCCBCEECCSSCEEECSSS-----BCCSS-SCCC-SCCEEESCCCCCC-CCSSCBCCSSCCSSCC----SCCCCCCBCS
T ss_pred cCCeEEEEeCCCCeeCCCCc-----eEECC-CccC-CCCeeeeeeCcCC-CCcCCeeccCCCCccc----CCCEEEEEcC
Confidence 99999999999999999875 89999 9999 9999999999966 6778887642111122 9999999999
Q ss_pred CCCeEEeCCCceeeCCCCceEEecCCCCCCccCCC
Q psy833 295 KPGYILINPRPITCVREPECKIIKPLGLASGRIPD 329 (642)
Q Consensus 295 ~~Gy~l~G~~~~~C~~~P~C~~v~p~~~~~g~~~~ 329 (642)
+||.|.|+..++|+.+ +.|++.+|.
T Consensus 217 -~Gy~l~G~~~~~C~~~---------g~Ws~~~P~ 241 (244)
T 1rid_A 217 -YGYKLSGSSSSTCSPG---------NTWKPELPK 241 (244)
T ss_dssp -SSCEEESCSCCEEETT---------TEEESCCCE
T ss_pred -CCCEECCCCCeEECCC---------CeECCCCCE
Confidence 9999999999999974 667766553
No 24
>2xrb_A Complement regulatory protein CRRY; immune system, immunology; 2.50A {Rattus norvegicus} PDB: 2xrd_A
Probab=99.93 E-value=3.6e-26 Score=235.56 Aligned_cols=197 Identities=20% Similarity=0.411 Sum_probs=153.5
Q ss_pred ccccCCCCCeecCCCCCCcccC-CCCcccCCCCCCCCCCCCCCCCceeeccCCCCCCCCCCCCCCCCCccceecCCC---
Q psy833 61 ECVPVCGYGTYSPTGLVPCLEC-PRNSYTGEPPVGGHKDCEACPANMFTYQPAAPARNFCRVPTPGAEYGNFLDTRY--- 136 (642)
Q Consensus 61 ~C~~~C~~G~y~~~g~~~C~~C-~~G~y~~~~p~~g~~~C~~Cp~G~~~~~~~~~s~~~C~~~~~~p~nG~~~~~~~--- 136 (642)
.|.-.|.+||+. +. .=..| ..|.|.... ..|. ...|. .+..|.||.+.....
T Consensus 63 ~~~y~C~~Gy~~--~~-~~~~C~~~g~Ws~~~-----p~C~---------------~~~C~-~p~~~~nG~~~~~~~~~~ 118 (290)
T 2xrb_A 63 SLKYECRPGYIK--RQ-FSITCEVNSVWTSPQ-----DVCI---------------RKQCE-TPLDPQNGIVHVNTDIRF 118 (290)
T ss_dssp EEEEEECTTBCC--CE-EEEEECTTSCEECCT-----TCSC---------------BCBCC-CCCCCTTEEEEESSCSBT
T ss_pred EEEEEccCCcCC--CC-CeEEECCCCeECCCC-----CCcC---------------cCCCc-CCCCCCCceEecCCCccc
Confidence 455578899842 21 12345 367887542 3555 35677 456789999876422
Q ss_pred CeeeEEeCCCCeeccCCcCCCCceEecccCC---eeecCCCCccCCcCCCCCCCCCceeeecceeeeeeCCcCCCCcccc
Q psy833 137 QSSFFFGCQDTFKLAGQTDKNDNVVRCQANG---IWDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDT 213 (642)
Q Consensus 137 ~~~~~~~C~~Gy~l~g~~~~~~~~~~C~~~G---~Ws~~~p~C~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~ 213 (642)
.....|+|++||+|.|+. .++|+.+| +|+...|.|+++.|+.|+.+.||.+... ....|
T Consensus 119 G~~v~y~C~~GY~l~G~~-----~~~C~~~g~~~~Ws~~~P~C~~v~C~~p~~~~nG~~~~~-------------~~~~~ 180 (290)
T 2xrb_A 119 GSSITYTCNEGYRLIGSS-----SAMCIISDQSVAWDAEAPICESIPCEIPPSIPNGDFFSP-------------NREDF 180 (290)
T ss_dssp TCEEEEEECTTEEEESCS-----EEEEEEETTEEEESSCCCEEEECEECCCCCBTTEEEECS-------------STTCE
T ss_pred CCEEEEECCCCceeCCCC-----ceEEEeCCCCceeCCCCCeeccccCCCCCCCCCCeEecC-------------CCCcc
Confidence 123399999999999999 99999988 8999999999999999999999983321 11358
Q ss_pred ccCcEEEEEcccC------ccccCCccCCCceEEeccC----CeecCCCCceec-CcCCCCCCCCCcEEEccCCcccccc
Q psy833 214 RYQSSFFFGCQDT------FKLAGQTDKNDNVVRCQAN----GIWDFGDLRCEG-PVCSDPGRPVDGYQVATSYEQVRYD 282 (642)
Q Consensus 214 ~~gs~~~~~C~~G------y~l~G~~~~~~~~~~C~~~----G~Ws~~~P~C~~-~~C~~p~~~~~g~~~~~~~~~~~~~ 282 (642)
.+|++|+|+|++| |.|.|++. ++|+.+ |+|++..|.|+. +.|+. +.+.||.+.......+.
T Consensus 181 ~~g~~v~y~C~~G~~~~~~y~l~G~~~-----~~C~~~~~~~G~Ws~~~P~C~~~~~C~~-p~~~nG~~~~~~~~~y~-- 252 (290)
T 2xrb_A 181 HYGMVVTYQCNTDARGKKLFNLVGEPS-----IHCTSIDGQVGVWSGPPPQCIELNKCTP-PHVENAVIVSKNKSLFS-- 252 (290)
T ss_dssp ETTCEEEEEECBCTTSCBCEEEESCSE-----EEEEESSSSSEEESSCCCEEEETTEECC-CCCTTEEECSCCCSSEE--
T ss_pred ccCCEEEEEeCCCCCCcceEEecCCce-----eEecCCCCCCCeECCCCCcccccccCCC-CCCCCCeEecCCCCccc--
Confidence 9999999999999 99999974 899987 999999999996 68987 56789988753222222
Q ss_pred CCCCCEEEEEccCCCeEEeCCCceeeCC
Q psy833 283 DEQGSEVQFGCNKPGYILINPRPITCVR 310 (642)
Q Consensus 283 ~~~gs~~~~~C~~~Gy~l~G~~~~~C~~ 310 (642)
+|++|+|+|+ +||.|.|+..++|+.
T Consensus 253 --~g~~v~f~C~-~Gy~l~G~~~~~C~~ 277 (290)
T 2xrb_A 253 --LRDMVEFRCQ-DGFMMKGDSSVYCRS 277 (290)
T ss_dssp --TTCEEEEEEC-TTCEEESCSEEEEET
T ss_pred --CCCEEEEEcC-CCCEECCCCCeEECC
Confidence 9999999999 999999999999986
No 25
>3iyp_F Complement decay-accelerating factor; virus, receptor, complex, echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo sapiens}
Probab=99.93 E-value=2e-25 Score=237.73 Aligned_cols=203 Identities=19% Similarity=0.389 Sum_probs=157.8
Q ss_pred ccccCCCCCeecCCCCCCcccC-CCCcccCCCCCCCCCCCCCCCCceeeccCCCCCCCCCCCCCCCCCccceecC---CC
Q psy833 61 ECVPVCGYGTYSPTGLVPCLEC-PRNSYTGEPPVGGHKDCEACPANMFTYQPAAPARNFCRVPTPGAEYGNFLDT---RY 136 (642)
Q Consensus 61 ~C~~~C~~G~y~~~g~~~C~~C-~~G~y~~~~p~~g~~~C~~Cp~G~~~~~~~~~s~~~C~~~~~~p~nG~~~~~---~~ 136 (642)
.|.-.|..||....|...=..| .+|.|....| .|. ..|. .++.+.||.+... ..
T Consensus 60 ~v~y~C~~Gy~l~~G~~~~~~C~~dG~Ws~~~p-----~C~----------------~~C~-~P~~~~~g~~~~~~~~~~ 117 (381)
T 3iyp_F 60 VITYKCEESFVKIPGEKDSVICLKGSQWSDIEE-----FCN----------------RSCE-VPTRLNSASLKQPYITQN 117 (381)
T ss_dssp EEEEEECTTEEECTTSCCEEEEETTTEECCCCC-----CEE----------------EBCC-SCCCCSSEEECTTGGGCC
T ss_pred EEEEEcCCCCEecCCCCCeEEECCCCcccccCC-----ccc----------------ccCC-CCccccCCcccccccCCC
Confidence 4555788999876442222345 4688875432 443 2465 3456677766432 11
Q ss_pred Ce----eeEEeCCCCeeccC--CcCCCCceEecccCCeeecCCCCccCCcCCCCCCCCCceeeecceeeeeeCCcCCCCc
Q psy833 137 QS----SFFFGCQDTFKLAG--QTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNF 210 (642)
Q Consensus 137 ~~----~~~~~C~~Gy~l~g--~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~ 210 (642)
.| ...|+|++||.|.| .. .++|+++|.|+...|.|+++.|+.|+.+.||.+. +.
T Consensus 118 ~~~~Gs~v~y~C~~GY~l~g~~~~-----~~tC~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~------~~--------- 177 (381)
T 3iyp_F 118 YFPVGTVVEYECRPGYRREPSLSP-----KLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQID------VP--------- 177 (381)
T ss_dssp CCBTTCEEEEEECTTEEECTTSCC-----EEEBCTTSCBCCCCCSEEECBCCCCCCCTTEEEE------CS---------
T ss_pred cccCCCEEEEEcCCCcccCCCCCc-----eEEecCCCcCcccCceeccccCCCCCccCCCcee------cC---------
Confidence 22 23999999999988 56 8999999999999999999999999999999832 21
Q ss_pred cccccCcEEEEEcccCccccCCccCCCceEEeccCC---eecCCCCceecCcCCCCCCCCCcEEEccC--CccccccCCC
Q psy833 211 LDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANG---IWDFGDLRCEGPVCSDPGRPVDGYQVATS--YEQVRYDDEQ 285 (642)
Q Consensus 211 ~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G---~Ws~~~P~C~~~~C~~p~~~~~g~~~~~~--~~~~~~~~~~ 285 (642)
..+.+|++|.|+|++||+|.|... ++|+.+| +|++..|.|+++.|+.|+.+.||.+.... |. +
T Consensus 178 ~~~~~Gs~v~y~C~~GY~L~G~~~-----~~C~~~G~~~~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~y~-------~ 245 (381)
T 3iyp_F 178 GGILFGATISFSCNTGYKLFGSTS-----SFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYG-------Y 245 (381)
T ss_dssp SCSBTTCEEEEEECTTEEEESCSE-----EEEEEETTEEEESSCCCEEEECBCCCCCCCTTEEEETCCSCCB-------T
T ss_pred CCcCcCCEEEEEeCCCcccCCccc-----eEEecCCCcceEcCCCCeeeeeecCCCCCCCCCeEecCCCCee-------c
Confidence 347899999999999999999864 8999998 89999999999999999999999988642 33 9
Q ss_pred CCEEEEEccCCCeEEeCCCceeeCC----------CCceEEec
Q psy833 286 GSEVQFGCNKPGYILINPRPITCVR----------EPECKIIK 318 (642)
Q Consensus 286 gs~~~~~C~~~Gy~l~G~~~~~C~~----------~P~C~~v~ 318 (642)
|++|+|+|+ +||.|+|+..++|+. .|.|+++.
T Consensus 246 g~~v~y~C~-~Gy~L~G~~~~~C~~~~~~G~Ws~~~P~C~~~~ 287 (381)
T 3iyp_F 246 RQSVTYACN-KGFTMIGEHSIYCTVNNDEGEWSGPPPECRGKS 287 (381)
T ss_dssp TCEEEEEEC-TTCEEESCSEEEEECTTSSCEESSCCCEEEC--
T ss_pred CCEEEEEeC-CCCEeCCCCcEEecccCCCCEEcCCCCeEeCCC
Confidence 999999999 999999999999982 36676653
No 26
>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi domain, human complement system, complement second component C2; 1.80A {Homo sapiens}
Probab=99.93 E-value=2.4e-25 Score=220.69 Aligned_cols=169 Identities=22% Similarity=0.452 Sum_probs=139.5
Q ss_pred CCCCCCCCCCccceecCCC---CeeeEEeCCCCeeccCCcCCCCceEecccCCeeecC-------CCCccCCcCCCCCCC
Q psy833 118 FCRVPTPGAEYGNFLDTRY---QSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFG-------DLRCEGPVCSDPGRP 187 (642)
Q Consensus 118 ~C~~~~~~p~nG~~~~~~~---~~~~~~~C~~Gy~l~g~~~~~~~~~~C~~~G~Ws~~-------~p~C~~~~C~~p~~~ 187 (642)
.|+ .++.++||.+..++. .....|+|++||.|.| . .++|+.+|+|+.+ .|.|+++.|+.|+.+
T Consensus 3 ~C~-~p~~~~nG~~~~~~~~~~g~~~~y~C~~Gy~l~g-~-----~~~C~~~G~Ws~~~~~~~~~~p~C~~~~C~~p~~~ 75 (223)
T 3erb_A 3 SCP-QNVNISGGTFTLSHGWAPGSLLTYSCPQGLYPSP-A-----SRLCKSSGQWQTPGATRSLSKAVCKPVRCPAPVSF 75 (223)
T ss_dssp CCC-SCCCCBTCEEEESSTTSTTCEEEEECCTTEEEES-C-----EEEECTTSCEECC-------CCEEEECEEECCSCC
T ss_pred cCc-CCCCCCCCEEecCCCCcCCCEEEEECCCCCeecC-C-----eeEECCCCeECCCccCCCCCCCeEeeeECcCCCCC
Confidence 577 668899999987643 2234999999999998 7 7999999999984 899999999999999
Q ss_pred CCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceec--CcCCCCCC
Q psy833 188 VDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEG--PVCSDPGR 265 (642)
Q Consensus 188 ~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~--~~C~~p~~ 265 (642)
.||.+... ...|.+|++|+|+|++||.|.|... ++|+++|+|++..|.|+. +.|+.|..
T Consensus 76 ~nG~~~~~--------------~~~~~~g~~v~~~C~~Gy~l~G~~~-----~~C~~~G~Ws~~~P~C~~~~~~C~~p~~ 136 (223)
T 3erb_A 76 ENGIYTPR--------------LGSYPVGGNVSFECEDGFILRGSPV-----RQCRPNGMWDGETAVCDNGAGHCPNPGI 136 (223)
T ss_dssp TTEEEESC--------------CSEEETTCEEEEEECTTCEEESCSE-----EEBCTTSCBSSCCCEEECSCSSSCCCCC
T ss_pred CCCEEecC--------------CCCccCCCEEEEEeCCCCEEcCCCc-----eEECCCCeECCCCCEEEeCCccCcCCCC
Confidence 99983221 1358999999999999999999864 899999999999999998 79999865
Q ss_pred CCCcEEEc-cCCccccccCCCCCEEEEEccCCCeEEeCCCceeeCCCCceEEecCCCCCCccCCCC
Q psy833 266 PVDGYQVA-TSYEQVRYDDEQGSEVQFGCNKPGYILINPRPITCVREPECKIIKPLGLASGRIPDS 330 (642)
Q Consensus 266 ~~~g~~~~-~~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~~~P~C~~v~p~~~~~g~~~~~ 330 (642)
+ +|.+.. ..+. +|++|+|+|+ +||.|.|+..++|+++ +.|++.+|.|
T Consensus 137 ~-~g~~~~~~~~~-------~g~~v~~~C~-~Gy~l~G~~~~~C~~~---------G~Ws~~~P~C 184 (223)
T 3erb_A 137 S-LGAVRTGFRFG-------HGDKVRYRCS-SNLVLTGSSERECQGN---------GVWSGTEPIC 184 (223)
T ss_dssp C-TTEEEECCCCS-------TTCEEEEEEC-TTCEEESCSEEEBCTT---------SCBSSCCCEE
T ss_pred C-CCcEecCCCCC-------CCCEEEEEeC-CCCEEcCCCceEECCC---------CeECCCCCEE
Confidence 5 565543 3344 9999999999 9999999999999964 6666655544
No 27
>2wii_C H factor 1, complement factor H; immune system, sushi, secreted, polymorphism, glycoprotein, complement system, complement pathway, immune response; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2rlp_A 2rlq_A
Probab=99.92 E-value=1.4e-25 Score=229.62 Aligned_cols=199 Identities=20% Similarity=0.504 Sum_probs=155.7
Q ss_pred ccccCCCCCeecCCCCCCcccCCCCcccCCCCCCCCCCCCCCCCceeeccCCCCCCCCCCCCCCCCCccceecCC-CCe-
Q psy833 61 ECVPVCGYGTYSPTGLVPCLECPRNSYTGEPPVGGHKDCEACPANMFTYQPAAPARNFCRVPTPGAEYGNFLDTR-YQS- 138 (642)
Q Consensus 61 ~C~~~C~~G~y~~~g~~~C~~C~~G~y~~~~p~~g~~~C~~Cp~G~~~~~~~~~s~~~C~~~~~~p~nG~~~~~~-~~~- 138 (642)
.|.-.|.+||+.... .-..|..|.|....| .-.|. ...|. .++.+.||.+.... ..|
T Consensus 34 ~~~y~C~~Gy~l~G~--~~~~C~~g~Ws~~~P---~~~C~---------------~~~C~-~p~~~~nG~~~~~~~~~~~ 92 (277)
T 2wii_C 34 QAIYKCRPGYRSLGN--IIMVCRKGEWVALNP---LRKCQ---------------KRPCG-HPGDTPFGTFTLTGGNVFE 92 (277)
T ss_dssp EEEEEECTTEECSSC--EEEEECSSSEEESCS---SCCCE---------------ECBCC-CCCCCTTEEEEEESSSSSB
T ss_pred EEEEEcCCCCcCCCC--ceEEcCCCeeeCCCC---Ccccc---------------ccCCc-CCCCCCCCEEEecCCCccc
Confidence 455578899987542 235567888886432 11243 35677 55678999987542 222
Q ss_pred ---eeEEeCCCCeeccCCcCCCCceE-ecccCCeeecCCCCccCCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccc
Q psy833 139 ---SFFFGCQDTFKLAGQTDKNDNVV-RCQANGIWDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTR 214 (642)
Q Consensus 139 ---~~~~~C~~Gy~l~g~~~~~~~~~-~C~~~G~Ws~~~p~C~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~ 214 (642)
.+.|+|++||.|.|.. .+ +|+.+| |+...|.|+.+.|+.|+.+.||.+.... . .....+.
T Consensus 93 ~g~~v~y~C~~Gy~l~G~~-----~~r~C~~~g-Ws~~~P~C~~~~C~~p~~~~nG~~~~~~---~-------~~~~~~~ 156 (277)
T 2wii_C 93 YGVKAVYTCNEGYQLLGEI-----NYRECDTDG-WTNDIPICEVVKCLPVTAPENGKIVSSA---M-------EPDREYH 156 (277)
T ss_dssp TTCEEEEEECTTEEEESSC-----CEEEBCSSS-BCSCCCEEEECEECCCCCCTTEECCSSS---S-------CTTCCEE
T ss_pred CCCEEEEEcCCCceEeCCC-----ceeEeCCCC-cCCCCCcccceeCCCCCcccCCeEEecc---c-------ccCCccc
Confidence 2399999999999998 76 999999 9999999999999999999999832210 0 0114589
Q ss_pred cCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceecCcCCCCCCCCCcEEEcc--CCccccccCCCCCEEEEE
Q psy833 215 YQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGYQVAT--SYEQVRYDDEQGSEVQFG 292 (642)
Q Consensus 215 ~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~~g~~~~~--~~~~~~~~~~~gs~~~~~ 292 (642)
+|++|+|+|++||.|.|.+. ++|+++|+|++..|.|+.+.|+.| .+.||.+... .+. +|++|+|+
T Consensus 157 ~g~~v~y~C~~Gy~L~G~~~-----~~C~~~G~Ws~~~P~C~~v~C~~p-~~~nG~~~~~~~~y~-------~g~~v~~~ 223 (277)
T 2wii_C 157 FGQAVRFVCNSGYKIEGDEE-----MHCSDDGFWSKEKPKCVEISCKSP-DVINGSPISQKIIYK-------ENERFQYK 223 (277)
T ss_dssp TTBEEECEECTTEEEESCSE-----EEBCTTSSBSSCCCEEEECEECCC-CCTTEEESSCCCCEE-------TTCEEEEE
T ss_pred CCCEEEEEcCCCccCcCCCC-----CEECCCCeECCCCCeeeeeeCCCC-CCCCCeEccCCCCCc-------CCCEEEEE
Confidence 99999999999999999864 899999999999999999999976 4679988753 233 89999999
Q ss_pred ccCCCeEEeCCCceeeCC
Q psy833 293 CNKPGYILINPRPITCVR 310 (642)
Q Consensus 293 C~~~Gy~l~G~~~~~C~~ 310 (642)
|+ +||.|.|+..++|+.
T Consensus 224 C~-~Gy~l~G~~~~~C~~ 240 (277)
T 2wii_C 224 CN-MGYEYSERGDAVCTE 240 (277)
T ss_dssp EC-TTEEESSCSEEEEET
T ss_pred cC-CCCeECCCCCeEccC
Confidence 99 999999999999987
No 28
>3sw0_X H factor 1, complement factor H; innate immune response, sushi domains, cofactor in the inact of C3B, C3B, human plasma, immune system; 1.80A {Homo sapiens}
Probab=99.90 E-value=1.7e-23 Score=201.93 Aligned_cols=161 Identities=22% Similarity=0.450 Sum_probs=128.3
Q ss_pred CCCCCCCCCCCCccceecCC-CCe----eeEEeCCCCeeccCCcCCCCceEecccCCeeecCCCCccCC--cCCCCCCCC
Q psy833 116 RNFCRVPTPGAEYGNFLDTR-YQS----SFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGP--VCSDPGRPV 188 (642)
Q Consensus 116 ~~~C~~~~~~p~nG~~~~~~-~~~----~~~~~C~~Gy~l~g~~~~~~~~~~C~~~G~Ws~~~p~C~~~--~C~~p~~~~ 188 (642)
...|+ +++.++||.+.... ..| .+.|+|++||.|.|.. .++|+ +|+|+. .|.|+.+ .|+.|+.+.
T Consensus 2 ~v~C~-~pp~~~ng~~~~~~~~~~~~g~~~~y~C~~Gy~l~G~~-----~~~C~-~g~Ws~-~p~C~~~~~~C~~p~~~~ 73 (188)
T 3sw0_X 2 GTSCV-NPPTVQNAYIVSRQMSKYPSGERVRYQCRSPYEMFGDE-----EVMCL-NGNWTE-PPQCKDSTGKCGPPPPID 73 (188)
T ss_dssp CCCBC-SCCCCTTEEECSCCCSSBCTTCEEEEEECTTCEEESCS-----EEEEE-TTEECC-CCEEECTTCCBCSCCCCT
T ss_pred cCcCc-CCCCCCCCEEecccCCcccCCCEEEEECCCCCEECCCC-----EEEeC-CCEeCC-CCccCcCCCcCCCCCccC
Confidence 45687 56789999987642 223 2399999999999999 99999 999996 6999986 899999999
Q ss_pred CceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceecCcCCCCCCCCC
Q psy833 189 DGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVD 268 (642)
Q Consensus 189 ~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~~ 268 (642)
||.+... ....|.+|++|+|+|++||.|.|+.. ++|+ +|+|+. +|.|++ .|+.|..+.+
T Consensus 74 ng~~~~~-------------~~~~~~~g~~v~~~C~~Gy~l~G~~~-----~~C~-~G~Ws~-~P~C~~-~C~~p~~~~~ 132 (188)
T 3sw0_X 74 NGDITSF-------------PLSVYAPASSVEYQCQNLYQLEGNKR-----ITCR-NGQWSE-PPKCLH-PCVISREIME 132 (188)
T ss_dssp TEEESSC-------------CCSCBCTTCEEEEEECTTCEEESCSE-----EEEE-TTEECC-CCEEEC-CEECCHHHHH
T ss_pred CCeEecC-------------CCCcccCCCEEEEEcCCCCEECCCCe-----EEcC-CCccCC-CCcccc-cCCCChHHhc
Confidence 9983221 11458899999999999999999864 8999 999997 699998 8998876654
Q ss_pred c---EEEccC-Cccc-cccCCCCCEEEEEccCCCeEEeCCC---ceeeCC
Q psy833 269 G---YQVATS-YEQV-RYDDEQGSEVQFGCNKPGYILINPR---PITCVR 310 (642)
Q Consensus 269 g---~~~~~~-~~~~-~~~~~~gs~~~~~C~~~Gy~l~G~~---~~~C~~ 310 (642)
+ .+.... ...+ . +|++|+|+|+ +||+|.|+. .++|++
T Consensus 133 ~~~~~~~~~~~~~~y~~----~g~~v~~~C~-~Gy~l~G~~~~~~~~C~~ 177 (188)
T 3sw0_X 133 NYNIALRWTAKQKLYSR----TGESVEFVCK-RGYRLSSRSHTLRTTCWD 177 (188)
T ss_dssp HHTEEESCCSSCCCEEC----TTCEEEEEEC-TTCEECTTCCCSEEECBT
T ss_pred cCceeeecccccccccc----CCCEEEEECC-CCceeCCCCCCeEeEcCC
Confidence 3 222221 1111 2 8999999999 999999998 899996
No 29
>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi domain, human complement system, complement second component C2; 1.80A {Homo sapiens}
Probab=99.89 E-value=3.8e-23 Score=204.91 Aligned_cols=105 Identities=19% Similarity=0.367 Sum_probs=88.1
Q ss_pred CcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecC-------C
Q psy833 179 PVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDF-------G 251 (642)
Q Consensus 179 ~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~-------~ 251 (642)
+.|+.|+.+.||.+. +. ..+.+|++|+|+|++||.|.|.+ ++|+.+|+|+. .
T Consensus 2 ~~C~~p~~~~nG~~~------~~---------~~~~~g~~~~y~C~~Gy~l~g~~------~~C~~~G~Ws~~~~~~~~~ 60 (223)
T 3erb_A 2 PSCPQNVNISGGTFT------LS---------HGWAPGSLLTYSCPQGLYPSPAS------RLCKSSGQWQTPGATRSLS 60 (223)
T ss_dssp -CCCSCCCCBTCEEE------ES---------STTSTTCEEEEECCTTEEEESCE------EEECTTSCEECC-------
T ss_pred CcCcCCCCCCCCEEe------cC---------CCCcCCCEEEEECCCCCeecCCe------eEECCCCeECCCccCCCCC
Confidence 469999999999832 22 34789999999999999999953 89999999998 4
Q ss_pred CCceecCcCCCCCCCCCcEEEccCCccccccCCCCCEEEEEccCCCeEEeCCCceeeCC
Q psy833 252 DLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQGSEVQFGCNKPGYILINPRPITCVR 310 (642)
Q Consensus 252 ~P~C~~~~C~~p~~~~~g~~~~~~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~~ 310 (642)
.|.|+++.|+.|+.+.||.+.... ..+. +|++|+|+|+ +||.|.|+..++|+.
T Consensus 61 ~p~C~~~~C~~p~~~~nG~~~~~~-~~~~----~g~~v~~~C~-~Gy~l~G~~~~~C~~ 113 (223)
T 3erb_A 61 KAVCKPVRCPAPVSFENGIYTPRL-GSYP----VGGNVSFECE-DGFILRGSPVRQCRP 113 (223)
T ss_dssp CCEEEECEEECCSCCTTEEEESCC-SEEE----TTCEEEEEEC-TTCEEESCSEEEBCT
T ss_pred CCeEeeeECcCCCCCCCCEEecCC-CCcc----CCCEEEEEeC-CCCEEcCCCceEECC
Confidence 899999999999999999998632 1222 9999999999 999999998888876
No 30
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.89 E-value=6.4e-23 Score=238.70 Aligned_cols=176 Identities=23% Similarity=0.433 Sum_probs=148.3
Q ss_pred CCCCCCCCCCCCccceecCCCCeeeEEeCCCCeeccCCcCCCCceEecccCCeeecC---------CCCccCCcCCCCCC
Q psy833 116 RNFCRVPTPGAEYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFG---------DLRCEGPVCSDPGR 186 (642)
Q Consensus 116 ~~~C~~~~~~p~nG~~~~~~~~~~~~~~C~~Gy~l~g~~~~~~~~~~C~~~G~Ws~~---------~p~C~~~~C~~p~~ 186 (642)
...|+.++..+.||.+..........|+|++||.|.|.. .++|+.+|+|+.. .|.|+++.|+.|+.
T Consensus 9 ~~~C~~~~~~~~~g~~~~~~~g~~~~y~C~~Gy~l~g~~-----~~~C~~~g~Ws~~~~~~~~~~~~p~C~~~~C~~p~~ 83 (741)
T 3hrz_D 9 QGSCSLEGVEIKGGSFRLLQEGQALEYVCPSGFYPYPVQ-----TRTCRSTGSWSTLKTQDQKTVRKAECRAIHCPRPHD 83 (741)
T ss_dssp --CCCCTTCCCBTSEEEEEGGGTEEEEECCTTEEEESCS-----EEEBCTTSCBCCEECTTCCEESCCEEEECEECCCSC
T ss_pred CCCCCCCCccCCCCeeeeccCCCEEEEEeCCCCEECCCC-----eEEECCCCcCCCCCcccccCcCCCeEEeeECcCCCC
Confidence 356775667788998865444444599999999999999 9999999999985 88999999999999
Q ss_pred CCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceec--CcCCCCC
Q psy833 187 PVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEG--PVCSDPG 264 (642)
Q Consensus 187 ~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~--~~C~~p~ 264 (642)
+.||.+. +. ...|.+|++|+|+|++||.|.|+.. ++|+.+|+|++..|.|+. +.|+.|.
T Consensus 84 ~~ng~~~------~~--------~~~~~~g~~~~~~C~~Gy~l~G~~~-----~~C~~~g~Ws~~~p~C~~~~~~C~~p~ 144 (741)
T 3hrz_D 84 FENGEYW------PR--------SPYYNVSDEISFHCYDGYTLRGSAN-----RTCQVNGRWSGQTAICDNGAGYCSNPG 144 (741)
T ss_dssp CTTEEEE------CC--------CSSEETTCEEEEEECTTCEEESCSE-----EEBCTTSCBSSCCCEEECSCSSSCCCC
T ss_pred CCCCEEe------cc--------CCCcccCCEEEEEECCCCccCCCcc-----eEecCCCeEccCcCeeeccCCcCCCCC
Confidence 9999832 21 1458999999999999999999975 899999999999999997 7899998
Q ss_pred CCCCcEEEccCCccccccCCCCCEEEEEccCCCeEEeCCCceeeCCCCceEEecCCCCCCccCCCCCC
Q psy833 265 RPVDGYQVATSYEQVRYDDEQGSEVQFGCNKPGYILINPRPITCVREPECKIIKPLGLASGRIPDSSI 332 (642)
Q Consensus 265 ~~~~g~~~~~~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~~~P~C~~v~p~~~~~g~~~~~~~ 332 (642)
.+.++......+. +|++|+|+|+ +||.|.|+..++|+.+ +.|++..|.|..
T Consensus 145 ~~~~~~~~~~~~~-------~g~~v~~~C~-~gy~l~G~~~~~C~~~---------g~Ws~~~p~C~~ 195 (741)
T 3hrz_D 145 IPIGTRKVGSQYR-------LEDSVTYHCS-RGLTLRGSQRRTCQEG---------GSWSGTEPSCQD 195 (741)
T ss_dssp CCTTEEEECCCCS-------TTCEEEEEEC-TTSEEESCSEEEBCTT---------SSBSSCCCEEEC
T ss_pred CCCCCeeeCCccc-------cCCEEEEEcC-CCCEEcCCCeEEECCC---------CEEeCCCccccC
Confidence 8888877665565 9999999999 9999999999999975 788887776643
No 31
>2uwn_A H factor 1, human complement factor H; alternative splicing, sucrose octasulphate, AGE-related macular degeneration, complement alternate pathway; HET: SCR; 2.35A {Homo sapiens} PDB: 2v8e_A* 2ic4_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=99.87 E-value=5e-23 Score=198.30 Aligned_cols=166 Identities=23% Similarity=0.460 Sum_probs=132.0
Q ss_pred CCCCCCCCCCCCccceecC---CCC------eeeEEeCCCCeeccCC---cCCCCceEecccCCeeecCCCCccCCcCCC
Q psy833 116 RNFCRVPTPGAEYGNFLDT---RYQ------SSFFFGCQDTFKLAGQ---TDKNDNVVRCQANGIWDFGDLRCEGPVCSD 183 (642)
Q Consensus 116 ~~~C~~~~~~p~nG~~~~~---~~~------~~~~~~C~~Gy~l~g~---~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~ 183 (642)
.+.|+. +.++||.+... ... ....|+|++||.|.|. . .++|+.+| |+...| |++ .|+.
T Consensus 3 ~~~C~~--P~~~nG~~~~~~~~~~~~~~~~g~~~~y~C~~Gy~l~g~~~~~-----~~~C~~~g-Ws~~~~-C~~-~C~~ 72 (187)
T 2uwn_A 3 LKPCDY--PDIKHGGLYHENMRRPYFPVAVGKYYSYYCDEHFETPSGSYWD-----HIHCTQDG-WSPAVP-CLR-KCYF 72 (187)
T ss_dssp CCCBCC--CCCTTEEETTHHHHTTTCSBCTTCEEEEEECTTEECTTSSSEE-----EEEEETTE-EESSSC-CEE-EEEC
T ss_pred ccCCCC--CccccceEeccccccccccccCCCEEEEECCCCcEecCCccCC-----EEEeCCCC-CCCCCC-cCC-cCcC
Confidence 457863 46899999764 112 2239999999999998 6 89999999 998766 998 8987
Q ss_pred CCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCcccc-CCccCCCceEEeccCCeecCCCCceecC-cCC
Q psy833 184 PGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLA-GQTDKNDNVVRCQANGIWDFGDLRCEGP-VCS 261 (642)
Q Consensus 184 p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~-G~~~~~~~~~~C~~~G~Ws~~~P~C~~~-~C~ 261 (642)
| .+.||.+... ...|.+|++|+|+|++||.|. |.. .++|+++| |++ .|.|+.+ .|+
T Consensus 73 p-~~~ng~~~~~--------------~~~~~~g~~v~~~C~~Gy~l~~G~~-----~~~C~~~g-Ws~-~P~C~~v~~C~ 130 (187)
T 2uwn_A 73 P-YLENGYNQNH--------------GRKFVQGKSIDVACHPGYALPKAQT-----TVTCMENG-WSP-TPRCIRVKTCS 130 (187)
T ss_dssp C-CCTTEECSCT--------------TCEEETTCEEECEECTTEECSSSCS-----EEEEETTE-EES-CSCCEECCEEE
T ss_pred C-CCCccEEcCC--------------CccccCCCEEEEEcCCCCCccCCCe-----EEEecCCC-cCC-CCceeecccCC
Confidence 5 5789982211 134789999999999999997 775 49999999 998 6999997 899
Q ss_pred C-CCCCCCcEEEccCCccccccCCCCCEEEEEccCCCeEEeCC---CceeeCCCCceEEecCCCCCCccCCCC
Q psy833 262 D-PGRPVDGYQVATSYEQVRYDDEQGSEVQFGCNKPGYILINP---RPITCVREPECKIIKPLGLASGRIPDS 330 (642)
Q Consensus 262 ~-p~~~~~g~~~~~~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~---~~~~C~~~P~C~~v~p~~~~~g~~~~~ 330 (642)
. |+.+.||.+.... ..+. +|++|+|+|+ +||.|.|. ..++|+.+ + |++ .|.+
T Consensus 131 ~~p~~~~nG~~~~~~-~~y~----~g~~v~~~C~-~Gy~l~g~~~s~~~~C~~~---------g-Ws~-~P~C 186 (187)
T 2uwn_A 131 KSSIDIENGFISESQ-YTYA----LKEKAKYQCK-LGYVTADGETSGSITCGKD---------G-WSA-QPTC 186 (187)
T ss_dssp GGGCCCSSEECCSCC-SEEE----TTCEEEEEEC-TTCCCSSSCSEEEEEEETT---------E-ESC-CCCC
T ss_pred CCCccccCceEcCCC-ccCc----CCCEEEEECC-CCCEecCCCCcCeEEECCC---------C-cCC-CCcc
Confidence 8 5889999886532 1122 8999999999 99999995 79999985 7 988 6654
No 32
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=99.86 E-value=8.4e-22 Score=231.99 Aligned_cols=225 Identities=22% Similarity=0.442 Sum_probs=148.2
Q ss_pred eecCCCCCCceeCCCCceecCCCCccccccccCCCCCeecCCCCCCcccCCCCcccC--CCCCCCCCCCCC----CCCce
Q psy833 33 YQNNDRQGVCLKCPMGTYTREEGSKAVQECVPVCGYGTYSPTGLVPCLECPRNSYTG--EPPVGGHKDCEA----CPANM 106 (642)
Q Consensus 33 y~~~~~~~~C~~Cp~g~~~~~~gs~~~~~C~~~C~~G~y~~~g~~~C~~C~~G~y~~--~~p~~g~~~C~~----Cp~G~ 106 (642)
|..+.....|.+|++|-.....|. +|...|++||+... |+.+. .. ..+..|.+.|+. |..+.
T Consensus 493 Yl~e~~~c~C~PC~ngg~~~l~g~----~C~C~C~~g~~G~~-------Ce~~~-~~~~~~~v~G~ws~W~~w~~cs~~C 560 (913)
T 3t5o_A 493 YAAKFDPCQCAPCPNNGRPTLSGT----ECLCVCQSGTYGEN-------CEKQS-PDYKSNAVDGQWGCWSSWSTCDATY 560 (913)
T ss_dssp HHHTTCGGGSCCBTTTBEEEEETT----EEEEECCTTBCSTT-------SCCBC-SSCCCCCBCCCCCCCCCCCCCCSSS
T ss_pred hccccccccCCCCCCCCEeecCCC----ceEEEccCCccccC-------ccCcc-ccccccccCCCCcccCCCcccCCcc
Confidence 555556667888998876665443 67778999887632 22221 10 112345555541 11110
Q ss_pred eeccCCCCCCCCCCCCCCCCCccceecCCCCeeeEEeCCCCeeccCCcCCCCceEecccCC----eeecCCCCccCCcCC
Q psy833 107 FTYQPAAPARNFCRVPTPGAEYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANG----IWDFGDLRCEGPVCS 182 (642)
Q Consensus 107 ~~~~~~~~s~~~C~~~~~~p~nG~~~~~~~~~~~~~~C~~Gy~l~g~~~~~~~~~~C~~~G----~Ws~~~p~C~~~~C~ 182 (642)
.......|.. +.|.||...+.... ...+.| ||.|.|.. .++|+.+| .|+.+.|.|+. .|+
T Consensus 561 -----~~~r~R~C~n--P~P~~GG~~C~G~~-~~~~~C--gy~L~G~~-----~~~C~~~g~~~~~Ws~~~P~C~~-~C~ 624 (913)
T 3t5o_A 561 -----KRSRTRECNN--PAPQRGGKRCEGEK-RQEEDC--TFSIMENN-----GQPCINDDEEMKEVDLPEIEADS-GCP 624 (913)
T ss_dssp -----EEEEECCSCS--SCCBSSCCCCCSCS-EEEEEC--C--------------CCCCCCCC-----------CC-CBC
T ss_pred -----ccccccccCC--CCcccCCcccCCCc-eEEEEC--CCcccccc-----cceEeCCCCccccCCCCCCCCcC-cCC
Confidence 0111346763 45777777776432 236889 99999999 99999987 89999999999 899
Q ss_pred CCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceecCcCCC
Q psy833 183 DPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSD 262 (642)
Q Consensus 183 ~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~~~C~~ 262 (642)
.|+.+.||.+... ...|.+|++|+|+|++||.|.|... ++|+++|+|+++.|.|+++.|+.
T Consensus 625 ~p~~~~nG~~~~~--------------~~~y~~g~~v~y~C~~Gy~L~G~~~-----~~C~~~G~Ws~~~P~C~~v~C~~ 685 (913)
T 3t5o_A 625 QPVPPENGFIRNE--------------KQLYLVGEDVEISCLTGFETVGYQY-----FRCLPDGTWRQGDVECQRTECIK 685 (913)
T ss_dssp CCCCCTTEEESCC--------------CSCBCTTCEEEEEECTTEEEESCCE-----EEECTTSCEECCSCEEEECEEEC
T ss_pred CCCCCCCceEecC--------------CCceecccEEEEEeCCCCEECCCCc-----eEECCCCeEcCCCCeeccCcCCC
Confidence 9999999983221 1458999999999999999999874 99999999999999999999999
Q ss_pred CCCCCCcEEEccCCccccccCCCCCEEEEEccCCCeEEeCCCceeeCC
Q psy833 263 PGRPVDGYQVATSYEQVRYDDEQGSEVQFGCNKPGYILINPRPITCVR 310 (642)
Q Consensus 263 p~~~~~g~~~~~~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~~ 310 (642)
|+.+.++.+.... ..+. +|++|+|+|+ +||.|.|+..++|+.
T Consensus 686 P~~~~~~~~~~~~-~~y~----~gs~v~y~C~-~Gy~l~G~~~~~C~~ 727 (913)
T 3t5o_A 686 PVVQEVLTITPFQ-RLYR----IGESIELTCP-KGFVVAGPSRYTCQG 727 (913)
T ss_dssp CCCCSSSBCSSCC-SEEE----TTCEEECBCC-TTCEESSCSEEECBT
T ss_pred CCCCCCcEecCCC-Cccc----CCCEEEEEeC-CCCEECCCCceEECC
Confidence 9988877664321 1122 8999999999 999999999999998
No 33
>3sw0_X H factor 1, complement factor H; innate immune response, sushi domains, cofactor in the inact of C3B, C3B, human plasma, immune system; 1.80A {Homo sapiens}
Probab=99.84 E-value=9.7e-21 Score=182.49 Aligned_cols=107 Identities=22% Similarity=0.482 Sum_probs=87.6
Q ss_pred CCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceec
Q psy833 178 GPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEG 257 (642)
Q Consensus 178 ~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~ 257 (642)
.+.|+.|+.+.||.+... ....|.+|++|+|+|+.||.|.|+.. ++|+ +|+|+. .|.|+.
T Consensus 2 ~v~C~~pp~~~ng~~~~~-------------~~~~~~~g~~~~y~C~~Gy~l~G~~~-----~~C~-~g~Ws~-~p~C~~ 61 (188)
T 3sw0_X 2 GTSCVNPPTVQNAYIVSR-------------QMSKYPSGERVRYQCRSPYEMFGDEE-----VMCL-NGNWTE-PPQCKD 61 (188)
T ss_dssp CCCBCSCCCCTTEEECSC-------------CCSSBCTTCEEEEEECTTCEEESCSE-----EEEE-TTEECC-CCEEEC
T ss_pred cCcCcCCCCCCCCEEecc-------------cCCcccCCCEEEEECCCCCEECCCCE-----EEeC-CCEeCC-CCccCc
Confidence 457999999999983321 11458999999999999999999864 8999 999995 699998
Q ss_pred C--cCCCCCCCCCcEEEccCCccccccCCCCCEEEEEccCCCeEEeCCCceeeC
Q psy833 258 P--VCSDPGRPVDGYQVATSYEQVRYDDEQGSEVQFGCNKPGYILINPRPITCV 309 (642)
Q Consensus 258 ~--~C~~p~~~~~g~~~~~~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~ 309 (642)
+ .|+.|+.+.||.+.......+. +|++|+|+|+ +||.|.|+..++|+
T Consensus 62 ~~~~C~~p~~~~ng~~~~~~~~~~~----~g~~v~~~C~-~Gy~l~G~~~~~C~ 110 (188)
T 3sw0_X 62 STGKCGPPPPIDNGDITSFPLSVYA----PASSVEYQCQ-NLYQLEGNKRITCR 110 (188)
T ss_dssp TTCCBCSCCCCTTEEESSCCCSCBC----TTCEEEEEEC-TTCEEESCSEEEEE
T ss_pred CCCcCCCCCccCCCeEecCCCCccc----CCCEEEEEcC-CCCEECCCCeEEcC
Confidence 7 8999999999998763222222 8999999999 99999988777775
No 34
>2qy0_A Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens}
Probab=99.81 E-value=7.3e-20 Score=171.38 Aligned_cols=136 Identities=21% Similarity=0.445 Sum_probs=105.6
Q ss_pred CCCCCCCCCCCCccceecC-CCCee----eEEeCCCCeeccC------CcCCCCceEecccCCeeecCCCCccCCcCCCC
Q psy833 116 RNFCRVPTPGAEYGNFLDT-RYQSS----FFFGCQDTFKLAG------QTDKNDNVVRCQANGIWDFGDLRCEGPVCSDP 184 (642)
Q Consensus 116 ~~~C~~~~~~p~nG~~~~~-~~~~~----~~~~C~~Gy~l~g------~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p 184 (642)
...|+ .++.|.||.+... ...|. +.|+|++||.|.| +. .++|+.+|+|+...|.|+++.|+.|
T Consensus 2 s~~C~-~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~Gy~l~g~~~~~~s~-----~~~C~~~G~Ws~~~p~C~~~~C~~p 75 (159)
T 2qy0_A 2 TQACP-QPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSF-----TAVCQDDGTWHRAMPRCKIKDCGQP 75 (159)
T ss_dssp -CBCC-CCCCCSTTEEEETCCSSCBTTCEEEEEECTTEEEEETTEEESCC-----EEEBCTTSCBSSCCCEEEECBCCSC
T ss_pred CccCc-CCCCCCCCcEecCCCCccccCCEEEEEcCCCcEEccCCccccee-----EEECCCCCcCcCCCCccccccCCCC
Confidence 35677 5677899976543 23333 3999999999997 46 8999999999999999999999999
Q ss_pred CCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCcccc----CCccCCCceEEeccCCeecCC-----CCce
Q psy833 185 GRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLA----GQTDKNDNVVRCQANGIWDFG-----DLRC 255 (642)
Q Consensus 185 ~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~----G~~~~~~~~~~C~~~G~Ws~~-----~P~C 255 (642)
+.+.||.+.. .. ....+.+|++|+|+|++||.|. |++...+..++|+++|+|++. .|.|
T Consensus 76 ~~~~nG~~~~------~~------~~~~~~~g~~v~y~C~~Gy~~~~~~~G~~~~g~~~~~C~~~G~Ws~~~~~~~~P~C 143 (159)
T 2qy0_A 76 RNLPNGDFRY------TT------TMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRC 143 (159)
T ss_dssp CCCTTEEEEE------SS------STTCCBTTCEEEEEECTTTEEECCC---CCSSTTEEEECTTSSEEBTTTBTSCCCE
T ss_pred CCCCCCeeEe------cc------CCCCcccCCEEEEECCCcceecccccCccccCCccEEECCCccCCCCCCCccCCce
Confidence 9999998332 10 0135899999999999999876 541100125999999999997 9999
Q ss_pred ecCcCCCCCCCCCcE
Q psy833 256 EGPVCSDPGRPVDGY 270 (642)
Q Consensus 256 ~~~~C~~p~~~~~g~ 270 (642)
+++ |+.|..|.||.
T Consensus 144 ~~~-C~~p~~p~~g~ 157 (159)
T 2qy0_A 144 LPV-CGKPVNPVEQR 157 (159)
T ss_dssp EEC-CSCCSSCSSCC
T ss_pred eCC-CCCCCCCcccc
Confidence 998 99999999885
No 35
>3gov_A MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_A
Probab=99.81 E-value=7.9e-20 Score=170.45 Aligned_cols=135 Identities=20% Similarity=0.382 Sum_probs=107.0
Q ss_pred CCCCCCCCCCCCccceecCCCCeee----EEeCCCCeeccCCcC-CCCceEecccCCeeecCCCCccCCcCCCCCCCCCc
Q psy833 116 RNFCRVPTPGAEYGNFLDTRYQSSF----FFGCQDTFKLAGQTD-KNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDG 190 (642)
Q Consensus 116 ~~~C~~~~~~p~nG~~~~~~~~~~~----~~~C~~Gy~l~g~~~-~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~~g 190 (642)
...|+ .+..|.||.+......|.+ .|+|++||.|.|... .....++|+.+|+|+...|.|+++.|+.|+.+.||
T Consensus 5 ~i~C~-~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~nG 83 (155)
T 3gov_A 5 GNECP-ELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCKIVDCRAPGELEHG 83 (155)
T ss_dssp CCEEC-CCCCCTTEEEESCCSSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCBSSCCCEEEECBCCSCCCCTTE
T ss_pred ceeCC-CCCCCCCCEEecCCCCcccCCEEEEECCCCcEEccCccccceeEEEECCCCeEcCCCCeeeEccCCCCCCCcCc
Confidence 46787 5678899999887554443 999999999987530 00016999999999999999999999999999999
Q ss_pred eeeecceeeeeeCCcCCCCccccccCcEEEEEcccCc-ccc--CCccCCCceEEeccCCeecC-----CCCceecCcCCC
Q psy833 191 YQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTF-KLA--GQTDKNDNVVRCQANGIWDF-----GDLRCEGPVCSD 262 (642)
Q Consensus 191 ~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy-~l~--G~~~~~~~~~~C~~~G~Ws~-----~~P~C~~~~C~~ 262 (642)
.+. |.. ....+.+|++|+|+|++|| .|. |+. .++|+++|+|++ ..|.|+++ |+.
T Consensus 84 ~~~------~~~------~~~~~~~g~~v~y~C~~Gy~~l~~~G~~-----~~~C~~~G~Ws~~~~~~~~P~C~~v-C~~ 145 (155)
T 3gov_A 84 LIT------FST------RNNLTTYKSEIKYSCQEPYYKMLNNNTG-----IYTCSAQGVWMNKVLGRSLPTCLPV-CGL 145 (155)
T ss_dssp EEE------ESS------TTCCCBTTCEEEEEECTTTEEECTTCCC-----EEEECTTSCEEBTTTBTSCCCEEEC-CSC
T ss_pred eEE------ecC------CCCccccCCEEEEEeCCChhhhccCCCc-----eEEECCCCeECCCcCCCCCCcCCCc-cCC
Confidence 832 221 1145899999999999997 787 665 489999999998 79999997 999
Q ss_pred CCCCCCc
Q psy833 263 PGRPVDG 269 (642)
Q Consensus 263 p~~~~~g 269 (642)
|..|.++
T Consensus 146 P~~p~~~ 152 (155)
T 3gov_A 146 PKFSRKL 152 (155)
T ss_dssp CSSCCC-
T ss_pred CCCChhh
Confidence 9877544
No 36
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.81 E-value=5.3e-20 Score=214.11 Aligned_cols=106 Identities=22% Similarity=0.349 Sum_probs=87.2
Q ss_pred CCccCCcCC-CCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCC-
Q psy833 174 LRCEGPVCS-DPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFG- 251 (642)
Q Consensus 174 p~C~~~~C~-~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~- 251 (642)
..|....|+ +++.+.||. + ..+.+|++|+|+|++||.|.|..+ ++|+.+|+|+..
T Consensus 5 ~~c~~~~C~~~~~~~~~g~-~-----------------~~~~~g~~~~y~C~~Gy~l~g~~~-----~~C~~~g~Ws~~~ 61 (741)
T 3hrz_D 5 LARPQGSCSLEGVEIKGGS-F-----------------RLLQEGQALEYVCPSGFYPYPVQT-----RTCRSTGSWSTLK 61 (741)
T ss_dssp ------CCCCTTCCCBTSE-E-----------------EEEGGGTEEEEECCTTEEEESCSE-----EEBCTTSCBCCEE
T ss_pred ccCCCCCCCCCCccCCCCe-e-----------------eeccCCCEEEEEeCCCCEECCCCe-----EEECCCCcCCCCC
Confidence 368888999 777788887 2 236799999999999999999864 899999999974
Q ss_pred --------CCceecCcCCCCCCCCCcEEEccC--CccccccCCCCCEEEEEccCCCeEEeCCCceeeCC
Q psy833 252 --------DLRCEGPVCSDPGRPVDGYQVATS--YEQVRYDDEQGSEVQFGCNKPGYILINPRPITCVR 310 (642)
Q Consensus 252 --------~P~C~~~~C~~p~~~~~g~~~~~~--~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~~ 310 (642)
.|.|+.+.|+.|+.+.||.+.... |. +|++|+|+|+ +||.|.|+..++|+.
T Consensus 62 ~~~~~~~~~p~C~~~~C~~p~~~~ng~~~~~~~~~~-------~g~~~~~~C~-~Gy~l~G~~~~~C~~ 122 (741)
T 3hrz_D 62 TQDQKTVRKAECRAIHCPRPHDFENGEYWPRSPYYN-------VSDEISFHCY-DGYTLRGSANRTCQV 122 (741)
T ss_dssp CTTCCEESCCEEEECEECCCSCCTTEEEECCCSSEE-------TTCEEEEEEC-TTCEEESCSEEEBCT
T ss_pred cccccCcCCCeEEeeECcCCCCCCCCEEeccCCCcc-------cCCEEEEEEC-CCCccCCCcceEecC
Confidence 889999999999999999997642 33 8999999999 999999999988876
No 37
>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A
Probab=99.80 E-value=1.3e-19 Score=165.00 Aligned_cols=111 Identities=26% Similarity=0.530 Sum_probs=94.0
Q ss_pred CccCCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCe---ecCC
Q psy833 175 RCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGI---WDFG 251 (642)
Q Consensus 175 ~C~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~---Ws~~ 251 (642)
.|+++.|+.|+.+.||.+.. . ..+.+|++|+|+|++||+|.|.+. ++|+.+|+ |++.
T Consensus 1 ~c~~~~C~~p~~~~nG~~~~------~---------~~~~~g~~v~y~C~~Gy~l~G~~~-----~~C~~~G~~~~Ws~~ 60 (136)
T 1gkg_A 1 EAEAKSCKTPPDPVNGMVHV------I---------TDIQVGSRITYSCTTGHRLIGHSS-----AECILSGNTAHWSTK 60 (136)
T ss_dssp CCSCCBCCCCCCCSSCEEEC------C---------SCSBTTCEEEEECCSSEEECSCSE-----EEEEECSSSEEESSC
T ss_pred CcccCCCcCCCCCCCCEEEC------C---------CCCccCCEEEEECCCCCeEcCCCc-----eEEeCCCccccccCC
Confidence 38889999999999998321 1 458999999999999999999864 89999999 9999
Q ss_pred CCceecCcCCCCCCCCCcEEEccCCccccccCCCCCEEEEEccCCC------eEEeCCCceeeCC
Q psy833 252 DLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQGSEVQFGCNKPG------YILINPRPITCVR 310 (642)
Q Consensus 252 ~P~C~~~~C~~p~~~~~g~~~~~~~~~~~~~~~~gs~~~~~C~~~G------y~l~G~~~~~C~~ 310 (642)
.|.|+.+.|+.|+.+.||.+.......+. +|++|+|+|+ +| |.|.|+..++|+.
T Consensus 61 ~P~C~~~~C~~p~~~~nG~~~~~~~~~~~----~g~~v~y~C~-~Gy~~~~~y~l~G~~~~~C~~ 120 (136)
T 1gkg_A 61 PPICQRIPCGLPPTIANGDFISTNRENFH----YGSVVTYRCN-LGSRGRKVFELVGEPSIYCTS 120 (136)
T ss_dssp CCCEEECCCCCCCCCTTCCBCSSCSSCCC----SSCEEEBCCC-CTTSCCSSCCEESCCEEECCC
T ss_pred CCCEEeecCCCCCCCCCCeEEcCCCCccc----cCCEEEEEeC-CCCCccceEEEeCCCeeEECC
Confidence 99999999999999999998763212222 9999999999 99 8888888888876
No 38
>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1
Probab=99.80 E-value=1.5e-19 Score=162.78 Aligned_cols=116 Identities=18% Similarity=0.442 Sum_probs=99.4
Q ss_pred CCCCCCCCCCCCccceecCC--CCee----eEEeCCCCeeccCCcCCCCceEecccCCeeecCCCCccCCcCCCCCCCCC
Q psy833 116 RNFCRVPTPGAEYGNFLDTR--YQSS----FFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVD 189 (642)
Q Consensus 116 ~~~C~~~~~~p~nG~~~~~~--~~~~----~~~~C~~Gy~l~g~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~~ 189 (642)
...|. .++.+.||.+.... ..+. ..|+|++|| |.|.. .++|+.+|+|+...|.|+++.|+.|+.+.|
T Consensus 3 ~~~C~-~p~~~~ng~~~~~~~~~~~~~g~~~~y~C~~Gy-l~G~~-----~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~n 75 (128)
T 1gkn_A 3 EAHCQ-APDHFLFAKLKTQTTASDFPIGTSLKYECRPEY-YGRPF-----SITCLDNLVWSSPKDVCKRKSCKTPPDPVN 75 (128)
T ss_dssp CCEEC-CCCCCSSEEECSCCCCSSEESSCEEEEEECTTE-ESCCE-----EEEBCSSSCBCCCCSCCEECBCCCCCCCTT
T ss_pred CccCc-CCCCCCCCEEeccCcCCCcCCCCEEEEEcCCCC-cCCCC-----ceEECCCCcCCCCCCeEcceECcCCCCCCC
Confidence 35677 56789999998754 2333 399999999 99999 999999999999999999999999999999
Q ss_pred ceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCe---ecCCCCceecC
Q psy833 190 GYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGI---WDFGDLRCEGP 258 (642)
Q Consensus 190 g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~---Ws~~~P~C~~~ 258 (642)
|.+. +. ..+.+|++|+|+|++||+|.|+.. ++|+.+|+ |++..|.|++|
T Consensus 76 G~~~------~~---------~~~~~g~~v~~~C~~Gy~l~G~~~-----~~C~~~G~~~~Ws~~~P~C~~i 127 (128)
T 1gkn_A 76 GMVH------VI---------TDIQVGSRITYSCTTGHRLIGHSS-----AECILSGNTAHWSTKPPICQRI 127 (128)
T ss_dssp EEEE------ES---------SCCBTTCEEEEEECTTEECCSCSE-----EEEEECSSSEEESSCCCCCEEC
T ss_pred cEEE------ec---------cCCccCCEEEEEeCCCCEEccCCc-----eEEcCCCCcCCccCCCCEeeEC
Confidence 9832 21 357999999999999999999864 89999999 99999999875
No 39
>2uwn_A H factor 1, human complement factor H; alternative splicing, sucrose octasulphate, AGE-related macular degeneration, complement alternate pathway; HET: SCR; 2.35A {Homo sapiens} PDB: 2v8e_A* 2ic4_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=99.79 E-value=1.2e-19 Score=174.64 Aligned_cols=111 Identities=20% Similarity=0.439 Sum_probs=79.9
Q ss_pred CCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceec
Q psy833 178 GPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEG 257 (642)
Q Consensus 178 ~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~ 257 (642)
.+.|+.| .+.||.+..+. . .+....+.+|++|+|+|++||+|.|.+. +..++|+++| |+..+| |++
T Consensus 3 ~~~C~~P-~~~nG~~~~~~------~---~~~~~~~~~g~~~~y~C~~Gy~l~g~~~--~~~~~C~~~g-Ws~~~~-C~~ 68 (187)
T 2uwn_A 3 LKPCDYP-DIKHGGLYHEN------M---RRPYFPVAVGKYYSYYCDEHFETPSGSY--WDHIHCTQDG-WSPAVP-CLR 68 (187)
T ss_dssp CCCBCCC-CCTTEEETTHH------H---HTTTCSBCTTCEEEEEECTTEECTTSSS--EEEEEEETTE-EESSSC-CEE
T ss_pred ccCCCCC-ccccceEeccc------c---ccccccccCCCEEEEECCCCcEecCCcc--CCEEEeCCCC-CCCCCC-cCC
Confidence 3468865 57999832210 0 0000114699999999999999999841 0148999999 998776 998
Q ss_pred CcCCCCCCCCCcEEEccCCccccccCCCCCEEEEEccCCCeEEe-CCCceeeCC
Q psy833 258 PVCSDPGRPVDGYQVATSYEQVRYDDEQGSEVQFGCNKPGYILI-NPRPITCVR 310 (642)
Q Consensus 258 ~~C~~p~~~~~g~~~~~~~~~~~~~~~~gs~~~~~C~~~Gy~l~-G~~~~~C~~ 310 (642)
.|+.| .+.||.+.... ..+. +|++|+|+|+ +||.|+ |...++|+.
T Consensus 69 -~C~~p-~~~ng~~~~~~-~~~~----~g~~v~~~C~-~Gy~l~~G~~~~~C~~ 114 (187)
T 2uwn_A 69 -KCYFP-YLENGYNQNHG-RKFV----QGKSIDVACH-PGYALPKAQTTVTCME 114 (187)
T ss_dssp -EEECC-CCTTEECSCTT-CEEE----TTCEEECEEC-TTEECSSSCSEEEEET
T ss_pred -cCcCC-CCCccEEcCCC-cccc----CCCEEEEEcC-CCCCccCCCeEEEecC
Confidence 89875 67899875431 1122 8999999999 999996 887777776
No 40
>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of comple activation, short consensus repeat, viral receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C
Probab=99.77 E-value=6.3e-19 Score=159.26 Aligned_cols=116 Identities=27% Similarity=0.549 Sum_probs=95.7
Q ss_pred CCCCCCCCCCCccceecCCCCee----eEEeCCCCeeccCCcCCCCceEeccc----CCeeecCCCCccC----CcCCCC
Q psy833 117 NFCRVPTPGAEYGNFLDTRYQSS----FFFGCQDTFKLAGQTDKNDNVVRCQA----NGIWDFGDLRCEG----PVCSDP 184 (642)
Q Consensus 117 ~~C~~~~~~p~nG~~~~~~~~~~----~~~~C~~Gy~l~g~~~~~~~~~~C~~----~G~Ws~~~p~C~~----~~C~~p 184 (642)
..|+ +++.|.||.+......+. ..|+|++||.|.|.. .++|+. +|+|+.+.|.|+. +.|+.|
T Consensus 2 i~C~-~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~-----~~~C~~~~~~~g~Ws~~~P~C~~~~~~~~C~~p 75 (130)
T 1ly2_A 2 ASCG-SPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEK-----SLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEP 75 (130)
T ss_dssp CEEC-CCCCCTTEEECCCCSSEETTCEEEEEECTTEEEESCS-----EEEEECSSSSSCEESSCCCEEEECCTTCEECCC
T ss_pred ccCC-CCCCCCCCeEecCCCcccCCCEEEEEcCCCCEEeCCC-----eeEEeCCCCCCCeECCCCCeeEcccCccCCcCC
Confidence 3576 567899999887544443 399999999999999 999986 8999999999996 789988
Q ss_pred CCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCC-CCceecC
Q psy833 185 GRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFG-DLRCEGP 258 (642)
Q Consensus 185 ~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~-~P~C~~~ 258 (642)
.+.+|.++. +. ..|.+|++|+|+|+.||.|.|+.. ++|+++|+|++. .|.|++|
T Consensus 76 -~~~~g~~~~-----~~---------~~~~~g~~v~~~C~~Gy~l~G~~~-----~~C~~~G~Ws~~~~P~C~~i 130 (130)
T 1ly2_A 76 -IVPGGYKIR-----GS---------TPYRHGDSVTFACKTNFSMNGNKS-----VWCQANNMWGPTRLPTCVSI 130 (130)
T ss_dssp -CCTTEEEEE-----CC---------SSEETTCEEEEEECTTEEEESCSE-----EEECTTSSEESSCCCEEEEC
T ss_pred -CCCCCeEec-----Cc---------ccccCCCEEEEEeCCCCEEeCCCc-----eEECCCCEECCCCCccceEC
Confidence 456676221 11 358999999999999999999974 899999999997 9999864
No 41
>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1
Probab=99.76 E-value=1.8e-18 Score=155.73 Aligned_cols=118 Identities=20% Similarity=0.402 Sum_probs=99.9
Q ss_pred CCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceec
Q psy833 178 GPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEG 257 (642)
Q Consensus 178 ~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~ 257 (642)
.+.|+.|+.+.||.+... .....|.+|++|.|+|++|| |.|... ++|+.+|+|++..|.|+.
T Consensus 3 ~~~C~~p~~~~ng~~~~~------------~~~~~~~~g~~~~y~C~~Gy-l~G~~~-----~~C~~~g~Ws~~~p~C~~ 64 (128)
T 1gkn_A 3 EAHCQAPDHFLFAKLKTQ------------TTASDFPIGTSLKYECRPEY-YGRPFS-----ITCLDNLVWSSPKDVCKR 64 (128)
T ss_dssp CCEECCCCCCSSEEECSC------------CCCSSEESSCEEEEEECTTE-ESCCEE-----EEBCSSSCBCCCCSCCEE
T ss_pred CccCcCCCCCCCCEEecc------------CcCCCcCCCCEEEEEcCCCC-cCCCCc-----eEECCCCcCCCCCCeEcc
Confidence 357999999999983321 00135899999999999999 999864 899999999999999999
Q ss_pred CcCCCCCCCCCcEEEcc-CCccccccCCCCCEEEEEccCCCeEEeCCCceeeCCCCceEEecCCCC---CCccCCCC
Q psy833 258 PVCSDPGRPVDGYQVAT-SYEQVRYDDEQGSEVQFGCNKPGYILINPRPITCVREPECKIIKPLGL---ASGRIPDS 330 (642)
Q Consensus 258 ~~C~~p~~~~~g~~~~~-~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~~~P~C~~v~p~~~---~~g~~~~~ 330 (642)
+.|+.|+.+.||.+... .+. +|++|+|+|+ +||+|+|+..++|+.+ +. |++.+|.+
T Consensus 65 ~~C~~p~~~~nG~~~~~~~~~-------~g~~v~~~C~-~Gy~l~G~~~~~C~~~---------G~~~~Ws~~~P~C 124 (128)
T 1gkn_A 65 KSCKTPPDPVNGMVHVITDIQ-------VGSRITYSCT-TGHRLIGHSSAECILS---------GNTAHWSTKPPIC 124 (128)
T ss_dssp CBCCCCCCCTTEEEEESSCCB-------TTCEEEEEEC-TTEECCSCSEEEEEEC---------SSSEEESSCCCCC
T ss_pred eECcCCCCCCCcEEEeccCCc-------cCCEEEEEeC-CCCEEccCCceEEcCC---------CCcCCccCCCCEe
Confidence 99999999999999763 344 9999999999 9999999999999964 66 88877765
No 42
>1h03_P Complement decay-accelerating factor; immune system protein, enteroviral receptor, bacterial receptor, ligand for CD97, complement pathway; 1.7A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P 1h04_P 2qzd_A
Probab=99.76 E-value=1.1e-18 Score=156.62 Aligned_cols=115 Identities=22% Similarity=0.440 Sum_probs=96.7
Q ss_pred CCCCCCCCCCccceecCCC---CeeeEEeCCCCeeccCCcCCCCceEecccCC---eeecCCCCccCCcCCCCCCCCCce
Q psy833 118 FCRVPTPGAEYGNFLDTRY---QSSFFFGCQDTFKLAGQTDKNDNVVRCQANG---IWDFGDLRCEGPVCSDPGRPVDGY 191 (642)
Q Consensus 118 ~C~~~~~~p~nG~~~~~~~---~~~~~~~C~~Gy~l~g~~~~~~~~~~C~~~G---~Ws~~~p~C~~~~C~~p~~~~~g~ 191 (642)
.|+ .++.|.||.+..... .....|+|++||.|.|.. .++|+.+| +|+...|.|+++.|+.|+.+.||.
T Consensus 2 ~C~-~p~~~~nG~~~~~~~~~~g~~~~~~C~~Gy~l~G~~-----~~~C~~~g~~~~Ws~~~p~C~~~~C~~p~~~~nG~ 75 (125)
T 1h03_P 2 SCP-NPGEIRNGQIDVPGGILFGATISFSCNTGYKLFGST-----SSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGI 75 (125)
T ss_dssp BCC-CCCCCTTEEEECTTCSBTTCEEEEEECTTEEEESCS-----EEEEEEETTEEEESSCCCEEEECBCCCCCCCTTEE
T ss_pred cCc-CCCCCCCCEEECCCCcCcCCEEEEECCCCCeECCCC-----eeEEcCCCCCCEeCCCCCcCCCCcCCCCCCCCCCE
Confidence 576 567899999987532 122399999999999999 99999998 999999999999999999999998
Q ss_pred eeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEecc---CCeecCCCCceec
Q psy833 192 QVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQA---NGIWDFGDLRCEG 257 (642)
Q Consensus 192 ~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~---~G~Ws~~~P~C~~ 257 (642)
+... ...|.+|++|+|+|++||+|.|+.. ++|+. +|+|++..|.|+.
T Consensus 76 ~~~~--------------~~~~~~g~~v~~~C~~Gy~l~G~~~-----~~C~~~~~~G~Ws~~~P~C~~ 125 (125)
T 1h03_P 76 IQGE--------------RDHYGYRQSVTYACNKGFTMIGEHS-----IYCTVNNDEGEWSGPPPECRG 125 (125)
T ss_dssp ETTC--------------CSCCBTTCEEEEEECTTCEEESCSE-----EEEEEETTEEEESSCCCEEEC
T ss_pred EeCC--------------cCceecCCEEEEEECCCCEECCCCe-----eEEecCCCCCEECCCCceecC
Confidence 3211 1358899999999999999999874 89985 6999999999974
No 43
>1h03_P Complement decay-accelerating factor; immune system protein, enteroviral receptor, bacterial receptor, ligand for CD97, complement pathway; 1.7A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P 1h04_P 2qzd_A
Probab=99.75 E-value=2.8e-18 Score=153.84 Aligned_cols=116 Identities=25% Similarity=0.500 Sum_probs=96.1
Q ss_pred cCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCC---eecCCCCcee
Q psy833 180 VCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANG---IWDFGDLRCE 256 (642)
Q Consensus 180 ~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G---~Ws~~~P~C~ 256 (642)
.|+.|+.+.||.+..+ ..+.+|++|+|+|++||+|.|... ++|+.+| +|++..|.|+
T Consensus 2 ~C~~p~~~~nG~~~~~---------------~~~~~g~~~~~~C~~Gy~l~G~~~-----~~C~~~g~~~~Ws~~~p~C~ 61 (125)
T 1h03_P 2 SCPNPGEIRNGQIDVP---------------GGILFGATISFSCNTGYKLFGSTS-----SFCLISGSSVQWSDPLPECR 61 (125)
T ss_dssp BCCCCCCCTTEEEECT---------------TCSBTTCEEEEEECTTEEEESCSE-----EEEEEETTEEEESSCCCEEE
T ss_pred cCcCCCCCCCCEEECC---------------CCcCcCCEEEEECCCCCeECCCCe-----eEEcCCCCCCEeCCCCCcCC
Confidence 5999999999983321 347899999999999999999864 8999988 9999999999
Q ss_pred cCcCCCCCCCCCcEEEcc--CCccccccCCCCCEEEEEccCCCeEEeCCCceeeCCCCceEEecCCCCCCccCCC
Q psy833 257 GPVCSDPGRPVDGYQVAT--SYEQVRYDDEQGSEVQFGCNKPGYILINPRPITCVREPECKIIKPLGLASGRIPD 329 (642)
Q Consensus 257 ~~~C~~p~~~~~g~~~~~--~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~~~P~C~~v~p~~~~~g~~~~ 329 (642)
.+.|+.|+.+.||.+... .+. +|++|+|+|+ +||.|+|+..++|+.+ ...+.|++.+|.
T Consensus 62 ~~~C~~p~~~~nG~~~~~~~~~~-------~g~~v~~~C~-~Gy~l~G~~~~~C~~~------~~~G~Ws~~~P~ 122 (125)
T 1h03_P 62 EIYCPAPPQIDNGIIQGERDHYG-------YRQSVTYACN-KGFTMIGEHSIYCTVN------NDEGEWSGPPPE 122 (125)
T ss_dssp ECBCCCCCCCTTEEETTCCSCCB-------TTCEEEEEEC-TTCEEESCSEEEEEEE------TTEEEESSCCCE
T ss_pred CCcCCCCCCCCCCEEeCCcCcee-------cCCEEEEEEC-CCCEECCCCeeEEecC------CCCCEECCCCce
Confidence 999999999999998763 234 9999999999 9999999999999830 001567665553
No 44
>3gov_A MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_A
Probab=99.74 E-value=5e-18 Score=158.19 Aligned_cols=123 Identities=19% Similarity=0.399 Sum_probs=97.2
Q ss_pred CccCCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccC-CCceEEeccCCeecCCCC
Q psy833 175 RCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDK-NDNVVRCQANGIWDFGDL 253 (642)
Q Consensus 175 ~C~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~-~~~~~~C~~~G~Ws~~~P 253 (642)
.|+++.|+.|..+.||.+. +. ...|.+|++|+|+|+.||+|.|.... ....++|+++|+|++..|
T Consensus 2 s~~~i~C~~p~~~~nG~~~------~~--------~~~~~~g~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~p 67 (155)
T 3gov_A 2 SMTGNECPELQPPVHGKIE------PS--------QAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIP 67 (155)
T ss_dssp ---CCEECCCCCCTTEEEE------SC--------CSSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCBSSCCC
T ss_pred CccceeCCCCCCCCCCEEe------cC--------CCCcccCCEEEEECCCCcEEccCccccceeEEEECCCCeEcCCCC
Confidence 5788899999999999832 22 13589999999999999999987510 001489999999999999
Q ss_pred ceecCcCCCCCCCCCcEEEccC-CccccccCCCCCEEEEEccCCCe-EEe--CCCceeeCCCCceEEecCCCCCCc
Q psy833 254 RCEGPVCSDPGRPVDGYQVATS-YEQVRYDDEQGSEVQFGCNKPGY-ILI--NPRPITCVREPECKIIKPLGLASG 325 (642)
Q Consensus 254 ~C~~~~C~~p~~~~~g~~~~~~-~~~~~~~~~~gs~~~~~C~~~Gy-~l~--G~~~~~C~~~P~C~~v~p~~~~~g 325 (642)
.|+.+.|+.|+.+.||.+.... ...+. +|++|+|+|+ +|| .|. |+..++|+.+ +.|++
T Consensus 68 ~C~~~~C~~p~~~~nG~~~~~~~~~~~~----~g~~v~y~C~-~Gy~~l~~~G~~~~~C~~~---------G~Ws~ 129 (155)
T 3gov_A 68 TCKIVDCRAPGELEHGLITFSTRNNLTT----YKSEIKYSCQ-EPYYKMLNNNTGIYTCSAQ---------GVWMN 129 (155)
T ss_dssp EEEECBCCSCCCCTTEEEEESSTTCCCB----TTCEEEEEEC-TTTEEECTTCCCEEEECTT---------SCEEB
T ss_pred eeeEccCCCCCCCcCceEEecCCCCccc----cCCEEEEEeC-CChhhhccCCCceEEECCC---------CeECC
Confidence 9999999999999999988532 12222 9999999999 996 888 8999999974 77777
No 45
>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of comple activation, short consensus repeat, viral receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C
Probab=99.74 E-value=5.4e-18 Score=153.07 Aligned_cols=104 Identities=23% Similarity=0.585 Sum_probs=86.6
Q ss_pred CcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEecc----CCeecCCCCc
Q psy833 179 PVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQA----NGIWDFGDLR 254 (642)
Q Consensus 179 ~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~----~G~Ws~~~P~ 254 (642)
+.|+.|+.+.||.+... ...|.+|++|+|+|++||+|.|.+. ++|+. +|+|++..|.
T Consensus 2 i~C~~p~~~~nG~~~~~--------------~~~~~~g~~v~y~C~~Gy~l~G~~~-----~~C~~~~~~~g~Ws~~~P~ 62 (130)
T 1ly2_A 2 ASCGSPPPILNGRISYY--------------STPIAVGTVIRYSCSGTFRLIGEKS-----LLCITKDKVDGTWDKPAPK 62 (130)
T ss_dssp CEECCCCCCTTEEECCC--------------CSSEETTCEEEEEECTTEEEESCSE-----EEEECSSSSSCEESSCCCE
T ss_pred ccCCCCCCCCCCeEecC--------------CCcccCCCEEEEEcCCCCEEeCCCe-----eEEeCCCCCCCeECCCCCe
Confidence 57999999999983221 1458999999999999999999964 89986 8999999999
Q ss_pred eec----CcCCCCCCCCCcEEEc-c-CCccccccCCCCCEEEEEccCCCeEEeCCCceeeCC
Q psy833 255 CEG----PVCSDPGRPVDGYQVA-T-SYEQVRYDDEQGSEVQFGCNKPGYILINPRPITCVR 310 (642)
Q Consensus 255 C~~----~~C~~p~~~~~g~~~~-~-~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~~ 310 (642)
|+. +.|+.| .+.+|.+.. . .+. +|++|+|+|+ +||.|.|+..++|+.
T Consensus 63 C~~~~~~~~C~~p-~~~~g~~~~~~~~~~-------~g~~v~~~C~-~Gy~l~G~~~~~C~~ 115 (130)
T 1ly2_A 63 CEYFNKYSSCPEP-IVPGGYKIRGSTPYR-------HGDSVTFACK-TNFSMNGNKSVWCQA 115 (130)
T ss_dssp EEECCTTCEECCC-CCTTEEEEECCSSEE-------TTCEEEEEEC-TTEEEESCSEEEECT
T ss_pred eEcccCccCCcCC-CCCCCeEecCccccc-------CCCEEEEEeC-CCCEEeCCCceEECC
Confidence 997 799998 455676654 2 344 9999999999 999999999999986
No 46
>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system; NMR {Homo sapiens}
Probab=99.74 E-value=1e-18 Score=158.38 Aligned_cols=114 Identities=23% Similarity=0.537 Sum_probs=96.4
Q ss_pred CCCCCCCCCCccceecC---CCCee----eEEeCCCCe-eccCCcCCCCceEecccCCeeecCCCCccCCcCCCCCCCCC
Q psy833 118 FCRVPTPGAEYGNFLDT---RYQSS----FFFGCQDTF-KLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVD 189 (642)
Q Consensus 118 ~C~~~~~~p~nG~~~~~---~~~~~----~~~~C~~Gy-~l~g~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~~ 189 (642)
.|+ +++.+.||.+... ...|. ..|+|++|| .|.|+. .++|+.+|+|+. .|.|+++.|+.|+.+.|
T Consensus 2 ~C~-~Pp~~~ng~~~~~~~~~~~y~~g~~v~y~C~~Gy~~l~G~~-----~~~C~~~G~Ws~-~p~C~~~~C~~p~~~~n 74 (133)
T 2a55_A 2 NCG-PPPTLSFAAPMDITLTETRFKTGTTLKYTCLPGYVRSHSTQ-----TLTCNSDGEWVY-NTFCIYKRCRHPGELRN 74 (133)
T ss_dssp CCC-SCCCCTTCBCCSSCTTCSCCCTTCCCCCBCCTTEESCCSCC-----CCEECSSSSEEC-CCCSEECBCCCCCCCTT
T ss_pred cCC-CCCCCCcceEccccccCCccCCCCEEEEEeCCCCcccCCCC-----EEEECCCCeECC-CCcCccCCCcCCCccCC
Confidence 466 5678999998763 22332 399999999 789999 999999999999 99999999999999999
Q ss_pred ceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCC---eecCCCCceecC
Q psy833 190 GYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANG---IWDFGDLRCEGP 258 (642)
Q Consensus 190 g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G---~Ws~~~P~C~~~ 258 (642)
|.+. +. ..+.+|++|+|+|++||.|.|+.. ++|+++| +|++.+|.|+..
T Consensus 75 G~~~------~~---------~~~~~g~~v~~~C~~Gy~L~G~~~-----~~C~~~G~~~~Ws~~~p~C~~~ 126 (133)
T 2a55_A 75 GQVE------IK---------TDLSFGSQIEFSCSEGFFLIGSTT-----SRCEVQDRGVGWSHPLPQCEIL 126 (133)
T ss_dssp BCCC------CC---------STTBSSCBCCCCBCTTCBCCSCSC-----CBCCCCSSSCCCSCCCCCCBCC
T ss_pred ceEE------cC---------CCCcCCCEEEEEcCCCCEEcCCCe-----eEecCCCCCCEeCCCCcccccc
Confidence 9822 11 357999999999999999999975 8999999 999999999864
No 47
>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A
Probab=99.73 E-value=6.1e-18 Score=153.99 Aligned_cols=117 Identities=23% Similarity=0.482 Sum_probs=97.9
Q ss_pred CCCCCCCCCCCCccceecCCC---CeeeEEeCCCCeeccCCcCCCCceEecccCCe---eecCCCCccCCcCCCCCCCCC
Q psy833 116 RNFCRVPTPGAEYGNFLDTRY---QSSFFFGCQDTFKLAGQTDKNDNVVRCQANGI---WDFGDLRCEGPVCSDPGRPVD 189 (642)
Q Consensus 116 ~~~C~~~~~~p~nG~~~~~~~---~~~~~~~C~~Gy~l~g~~~~~~~~~~C~~~G~---Ws~~~p~C~~~~C~~p~~~~~ 189 (642)
...|+ .++.|.||.+..... .....|+|++||.|.|.. .++|+.+|+ |+...|.|+++.|+.|+.+.|
T Consensus 4 ~~~C~-~p~~~~nG~~~~~~~~~~g~~v~y~C~~Gy~l~G~~-----~~~C~~~G~~~~Ws~~~P~C~~~~C~~p~~~~n 77 (136)
T 1gkg_A 4 AKSCK-TPPDPVNGMVHVITDIQVGSRITYSCTTGHRLIGHS-----SAECILSGNTAHWSTKPPICQRIPCGLPPTIAN 77 (136)
T ss_dssp CCBCC-CCCCCSSCEEECCSCSBTTCEEEEECCSSEEECSCS-----EEEEEECSSSEEESSCCCCEEECCCCCCCCCTT
T ss_pred cCCCc-CCCCCCCCEEECCCCCccCCEEEEECCCCCeEcCCC-----ceEEeCCCccccccCCCCCEEeecCCCCCCCCC
Confidence 46787 567899999975321 122399999999999999 999999999 999999999999999999999
Q ss_pred ceeeecceeeeeeCCcCCCCccccccCcEEEEEcccC------ccccCCccCCCceEEeccC----CeecCCCCcee
Q psy833 190 GYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDT------FKLAGQTDKNDNVVRCQAN----GIWDFGDLRCE 256 (642)
Q Consensus 190 g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~G------y~l~G~~~~~~~~~~C~~~----G~Ws~~~P~C~ 256 (642)
|.+.. . ....+.+|++|+|+|++| |.|.|+.. ++|+.+ |+|++..|.|+
T Consensus 78 G~~~~------~-------~~~~~~~g~~v~y~C~~Gy~~~~~y~l~G~~~-----~~C~~~~~~~G~Ws~~~P~C~ 136 (136)
T 1gkg_A 78 GDFIS------T-------NRENFHYGSVVTYRCNLGSRGRKVFELVGEPS-----IYCTSNDDQVGIWSGPAPQCI 136 (136)
T ss_dssp CCBCS------S-------CSSCCCSSCEEEBCCCCTTSCCSSCCEESCCE-----EECCCSSSSSCCCSCCCCEEC
T ss_pred CeEEc------C-------CCCccccCCEEEEEeCCCCCccceEEEeCCCe-----eEECCCCCCCCEECCCCcccC
Confidence 98322 1 013589999999999999 99999874 899999 99999999995
No 48
>2qy0_A Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens}
Probab=99.73 E-value=2.2e-17 Score=154.49 Aligned_cols=105 Identities=17% Similarity=0.337 Sum_probs=82.6
Q ss_pred CcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCcc-CCCceEEeccCCeecCCCCceec
Q psy833 179 PVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTD-KNDNVVRCQANGIWDFGDLRCEG 257 (642)
Q Consensus 179 ~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~-~~~~~~~C~~~G~Ws~~~P~C~~ 257 (642)
+.|+.|+.+.||.++.. ....|.+|++|+|+|++||+|.|... .....++|+++|+|++..|.|+.
T Consensus 3 ~~C~~p~~~~nG~~~~~-------------~~~~~~~g~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~p~C~~ 69 (159)
T 2qy0_A 3 QACPQPKTLDEFTIIQN-------------LQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRCKI 69 (159)
T ss_dssp CBCCCCCCCSTTEEEET-------------CCSSCBTTCEEEEEECTTEEEEETTEEESCCEEEBCTTSCBSSCCCEEEE
T ss_pred ccCcCCCCCCCCcEecC-------------CCCccccCCEEEEEcCCCcEEccCCcccceeEEECCCCCcCcCCCCcccc
Confidence 46999999999973321 11358999999999999999998420 00025899999999999999999
Q ss_pred CcCCCCCCCCCcEEEccC-CccccccCCCCCEEEEEccCCCeEEe
Q psy833 258 PVCSDPGRPVDGYQVATS-YEQVRYDDEQGSEVQFGCNKPGYILI 301 (642)
Q Consensus 258 ~~C~~p~~~~~g~~~~~~-~~~~~~~~~~gs~~~~~C~~~Gy~l~ 301 (642)
+.|+.|+.+.||.+.... ...+. +|++|+|+|+ +||.|.
T Consensus 70 ~~C~~p~~~~nG~~~~~~~~~~~~----~g~~v~y~C~-~Gy~~~ 109 (159)
T 2qy0_A 70 KDCGQPRNLPNGDFRYTTTMGVNT----YKARIQYYCH-EPYYKM 109 (159)
T ss_dssp CBCCSCCCCTTEEEEESSSTTCCB----TTCEEEEEEC-TTTEEE
T ss_pred ccCCCCCCCCCCeeEeccCCCCcc----cCCEEEEECC-Ccceec
Confidence 999999999999998632 11122 9999999999 999876
No 49
>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system; NMR {Homo sapiens}
Probab=99.72 E-value=2.2e-18 Score=156.22 Aligned_cols=119 Identities=18% Similarity=0.382 Sum_probs=99.9
Q ss_pred CcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCc-cccCCccCCCceEEeccCCeecCCCCceec
Q psy833 179 PVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTF-KLAGQTDKNDNVVRCQANGIWDFGDLRCEG 257 (642)
Q Consensus 179 ~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy-~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~ 257 (642)
+.|++|+.+.||.+... . .....|.+|++|+|+|++|| .|.|+.. ++|+.+|+|++ .|.|++
T Consensus 1 v~C~~Pp~~~ng~~~~~------~-----~~~~~y~~g~~v~y~C~~Gy~~l~G~~~-----~~C~~~G~Ws~-~p~C~~ 63 (133)
T 2a55_A 1 MNCGPPPTLSFAAPMDI------T-----LTETRFKTGTTLKYTCLPGYVRSHSTQT-----LTCNSDGEWVY-NTFCIY 63 (133)
T ss_dssp CCCCSCCCCTTCBCCSS------C-----TTCSCCCTTCCCCCBCCTTEESCCSCCC-----CEECSSSSEEC-CCCSEE
T ss_pred CcCCCCCCCCcceEccc------c-----ccCCccCCCCEEEEEeCCCCcccCCCCE-----EEECCCCeECC-CCcCcc
Confidence 46999999999983210 0 01135889999999999999 8889865 89999999999 999999
Q ss_pred CcCCCCCCCCCcEEEcc-CCccccccCCCCCEEEEEccCCCeEEeCCCceeeCCCCceEEecCCC---CCCccCCCCC
Q psy833 258 PVCSDPGRPVDGYQVAT-SYEQVRYDDEQGSEVQFGCNKPGYILINPRPITCVREPECKIIKPLG---LASGRIPDSS 331 (642)
Q Consensus 258 ~~C~~p~~~~~g~~~~~-~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~~~P~C~~v~p~~---~~~g~~~~~~ 331 (642)
+.|+.|+.+.||.+... .+. +|++|+|+|+ +||+|.|+..++|+.+ + .|++.+|.+.
T Consensus 64 ~~C~~p~~~~nG~~~~~~~~~-------~g~~v~~~C~-~Gy~L~G~~~~~C~~~---------G~~~~Ws~~~p~C~ 124 (133)
T 2a55_A 64 KRCRHPGELRNGQVEIKTDLS-------FGSQIEFSCS-EGFFLIGSTTSRCEVQ---------DRGVGWSHPLPQCE 124 (133)
T ss_dssp CBCCCCCCCTTBCCCCCSTTB-------SSCBCCCCBC-TTCBCCSCSCCBCCCC---------SSSCCCSCCCCCCB
T ss_pred CCCcCCCccCCceEEcCCCCc-------CCCEEEEEcC-CCCEEcCCCeeEecCC---------CCCCEeCCCCcccc
Confidence 99999999999998763 344 9999999999 9999999999999985 6 8999888664
No 50
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.69 E-value=5.3e-17 Score=173.49 Aligned_cols=126 Identities=25% Similarity=0.447 Sum_probs=104.1
Q ss_pred CCCCCCCCCCCccceecCCCCee----eEEeCCCCeeccCCcCCCCceEecc----cCCeeecCCCCccC----CcCCCC
Q psy833 117 NFCRVPTPGAEYGNFLDTRYQSS----FFFGCQDTFKLAGQTDKNDNVVRCQ----ANGIWDFGDLRCEG----PVCSDP 184 (642)
Q Consensus 117 ~~C~~~~~~p~nG~~~~~~~~~~----~~~~C~~Gy~l~g~~~~~~~~~~C~----~~G~Ws~~~p~C~~----~~C~~p 184 (642)
..|+ +++.|.||.+......|. ..|+|++||.|.|.. .++|+ .+|+|+++.|.|+. +.|+.|
T Consensus 2 i~C~-~p~~~~nG~~~~~~~~~~~g~~~~y~C~~Gy~l~G~~-----~~~C~~~~~~~g~Ws~~~P~C~~~~~~~~C~~p 75 (376)
T 2aty_A 2 ISCG-SPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEK-----SLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEP 75 (376)
T ss_pred CCCc-CCCCCCCCEEeccCCcccCCCEEEEEeCCCCEEcCCC-----ceEEeccCCCCCeECCCCCccccccCccEeCCC
Confidence 4677 567899999987544333 399999999999999 99999 79999999999997 689998
Q ss_pred CCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecC-CCCceecCcCCCC
Q psy833 185 GRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDF-GDLRCEGPVCSDP 263 (642)
Q Consensus 185 ~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~-~~P~C~~~~C~~p 263 (642)
..+.++. + .+. ..|.+|++|+|+|+.||.|.|... ++|+++|+|++ ..|.|+.+ |+.|
T Consensus 76 ~~~~~~~-~-----~~~---------~~~~~g~~~~~~C~~gy~l~G~~~-----~~C~~~g~Ws~~~~p~C~~~-~~~~ 134 (376)
T 2aty_A 76 IVPGGYK-I-----RGS---------TPYRHGDSVTFACKTNFSMNGNKS-----VWCQANNMWGPTRLPTCVSV-FPLE 134 (376)
T ss_pred cCCCCeE-e-----cCC---------CCccCCCEEEEECCCCCEECCCcC-----eEECCCCEECCCCCCEeEcc-CCCc
Confidence 8776665 2 221 358999999999999999999975 89999999998 79999986 6666
Q ss_pred CCCCCc
Q psy833 264 GRPVDG 269 (642)
Q Consensus 264 ~~~~~g 269 (642)
+.+.|+
T Consensus 135 ~~~~~~ 140 (376)
T 2aty_A 135 GSIEGR 140 (376)
T ss_pred ccccCC
Confidence 666664
No 51
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=99.66 E-value=4.7e-17 Score=191.66 Aligned_cols=156 Identities=21% Similarity=0.264 Sum_probs=118.7
Q ss_pred CCCCCCCCCCccceecCCCCee----eEEeCCCCeeccCCcCCCCceEecccCCeeecCCCCccCCcCCCCCCCCCceee
Q psy833 118 FCRVPTPGAEYGNFLDTRYQSS----FFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGYQV 193 (642)
Q Consensus 118 ~C~~~~~~p~nG~~~~~~~~~~----~~~~C~~Gy~l~g~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~~g~~~ 193 (642)
.|+ +++.|.||.+......|. +.|+|++||.|.|.. .++|+++|+|+.+.|.|+++.|+.|+.+.++. +
T Consensus 622 ~C~-~p~~~~nG~~~~~~~~y~~g~~v~y~C~~Gy~L~G~~-----~~~C~~~G~Ws~~~P~C~~v~C~~P~~~~~~~-~ 694 (913)
T 3t5o_A 622 GCP-QPVPPENGFIRNEKQLYLVGEDVEISCLTGFETVGYQ-----YFRCLPDGTWRQGDVECQRTECIKPVVQEVLT-I 694 (913)
T ss_dssp CBC-CCCCCTTEEESCCCSCBCTTCEEEEEECTTEEEESCC-----EEEECTTSCEECCSCEEEECEEECCCCCSSSB-C
T ss_pred cCC-CCCCCCCceEecCCCceecccEEEEEeCCCCEECCCC-----ceEECCCCeEcCCCCeeccCcCCCCCCCCCcE-e
Confidence 787 567889999986544443 399999999999999 99999999999999999999999999888776 2
Q ss_pred ecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceecCcCCCCCCCCCcEEEc
Q psy833 194 ATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGYQVA 273 (642)
Q Consensus 194 ~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~~g~~~~ 273 (642)
. .....|.+|++|+|+|++||.|.|+.. ++|+++ +|+++.|. .+.|..++.+..+ ..+
T Consensus 695 ~-------------~~~~~y~~gs~v~y~C~~Gy~l~G~~~-----~~C~~~-~Ws~~~P~--~i~C~~~~~~~~~-~~C 752 (913)
T 3t5o_A 695 T-------------PFQRLYRIGESIELTCPKGFVVAGPSR-----YTCQGN-SWTPPISN--SLTCEKDTLTKLK-GHC 752 (913)
T ss_dssp S-------------SCCSEEETTCEEECBCCTTCEESSCSE-----EECBTT-BCSCCCTT--SCCEECCC------CTT
T ss_pred c-------------CCCCcccCCCEEEEEeCCCCEECCCCc-----eEECCC-EeeCCCCe--eeECcCCCCCCCC-CCC
Confidence 1 111458899999999999999999964 999999 99998885 4578776554433 233
Q ss_pred cCCccccccCCCCCEEEEEccCCCeEEeCC-CceeeCC
Q psy833 274 TSYEQVRYDDEQGSEVQFGCNKPGYILINP-RPITCVR 310 (642)
Q Consensus 274 ~~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~-~~~~C~~ 310 (642)
.... .. .++++ .|. .+|.+-|. ....|..
T Consensus 753 ~~g~-~~----~~s~C--~C~-~p~~~c~~~~~~~C~~ 782 (913)
T 3t5o_A 753 QLGQ-KQ----SGSEC--ICM-SPEEDCSHHSEDLCVF 782 (913)
T ss_dssp TTTE-EC----STTSC--EEC-CHHHHCCSCCSEEEEE
T ss_pred CCCc-cc----CCCce--EEC-ChhhcCCCCCCCeecc
Confidence 3211 11 45555 898 89987777 6778875
No 52
>2yby_A Complement factor H; immune system, complement regulation, innate immunity, infec; 1.58A {Mus musculus}
Probab=99.63 E-value=1.5e-16 Score=142.26 Aligned_cols=110 Identities=22% Similarity=0.459 Sum_probs=86.9
Q ss_pred CCCCCCCCCCCccceecC---CC------CeeeEEeCCCCeeccCC---cCCCCceEecccCCeeecCCCCccCCcCCCC
Q psy833 117 NFCRVPTPGAEYGNFLDT---RY------QSSFFFGCQDTFKLAGQ---TDKNDNVVRCQANGIWDFGDLRCEGPVCSDP 184 (642)
Q Consensus 117 ~~C~~~~~~p~nG~~~~~---~~------~~~~~~~C~~Gy~l~g~---~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p 184 (642)
+.|.. +.++||.+... .. ...+.|+|++||.|.|. . .++|+.+| |+.. |.|+ +.|+.
T Consensus 3 ~~C~~--P~i~nG~~~~~~~~~~~yp~~~g~~v~y~C~~Gy~l~g~~~~~-----~~~C~~~g-Ws~~-p~C~-~~C~~- 71 (124)
T 2yby_A 3 KPCEF--PQFKYGRLYYEESLRPNFPVSIGNKYSYKCDNGFSPPSGYSWD-----YLRCTAQG-WEPE-VPCV-RKCVF- 71 (124)
T ss_dssp CCBCC--CCCTTEEETTHHHHGGGCSBCTTCEEEEEECTTEECTTCSSCE-----EEEEETTE-EESS-SCCE-EEEEE-
T ss_pred ccCCC--CcccCCEEEecccccccccccCCCEEEEECCCCCEeCCCCCcc-----EEEecCCC-ccCC-Ccee-eECcC-
Confidence 56773 38999998753 11 22349999999999999 8 99999999 9985 9999 78997
Q ss_pred CCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceec
Q psy833 185 GRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEG 257 (642)
Q Consensus 185 ~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~ 257 (642)
+.+.||.+.. ....|.+|++|+|+|++||.|.|... .++|+++| |++ +|.|++
T Consensus 72 p~~~nG~~~~--------------~~~~y~~g~~v~~~C~~Gy~l~G~~~----~~~C~~~g-Ws~-~P~C~~ 124 (124)
T 2yby_A 72 HYVENGDSAY--------------WEKVYVQGQSLKVQCYNGYSLQNGQD----TMTCTENG-WSP-PPKCIR 124 (124)
T ss_dssp CCCBTBCCCS--------------SCEEEETTCEEECCBCTTCCCSSSSC----EEEEETTE-EES-CSBCC-
T ss_pred CCCCCCeEec--------------ccCcccCCCEEEEECCCCCEecCCCC----eEEcCCCC-cCC-CCeecC
Confidence 5678997211 11347789999999999999999863 38999999 998 699863
No 53
>3r62_A H factor 1, complement factor H; immunity, repeating sushi domain, regulator of C activation, C3D, immune system; 1.52A {Homo sapiens} PDB: 2bzm_A 3oxu_D 3rj3_D 2g7i_A 3kxv_A 3kzj_A 2xqw_C
Probab=99.60 E-value=3e-16 Score=141.39 Aligned_cols=119 Identities=22% Similarity=0.440 Sum_probs=89.7
Q ss_pred CCCCCCCCCCCCccceecCC-CCe----eeEEeCCCCeeccCCcCCCCceEecccCCeeecCCCCccCCcCCCCCCCCCc
Q psy833 116 RNFCRVPTPGAEYGNFLDTR-YQS----SFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDG 190 (642)
Q Consensus 116 ~~~C~~~~~~p~nG~~~~~~-~~~----~~~~~C~~Gy~l~g~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~~g 190 (642)
...|. +++.+.||.+.... ..+ .+.|+|++||.|.|.. .++|+ +|+|+ ..|.|++ .|+.|..+.||
T Consensus 4 ~~~C~-~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~-----~~~C~-~g~Ws-~~p~C~~-~C~~p~~~~~g 74 (129)
T 3r62_A 4 FGKCG-PPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNK-----RITCR-NGQWS-EPPKCLH-PCVISREIMEN 74 (129)
T ss_dssp -CCBC-SCCCBTTEEESSCCCSSBCTTCEEEEEECTTCEEESCS-----EEEEE-TTEEC-CCCEEEC-CEECCHHHHHH
T ss_pred cccCc-CCCCCCCCEEecCCCCcCCCCCEEEEECCCCCEeCCCC-----eeEcC-CCcCC-CCCCccC-cCCCChhhhcc
Confidence 45787 56789999997632 233 2399999999999999 99999 99999 7899999 89998777777
Q ss_pred eeeecceeeeeeCCcCCCCcccc-ccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceec
Q psy833 191 YQVATSYEQVRYDDEQYGNFLDT-RYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEG 257 (642)
Q Consensus 191 ~~~~~~~~~C~~~~~~~g~~~~~-~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~ 257 (642)
..+. +.+. .....| .+|++|+|+|++||.|.|++. ...++|+ +|+| ..|.|++
T Consensus 75 ~~i~---~~~~------~~~~~y~~~g~~v~f~C~~Gy~l~G~~~--~~~~~C~-~G~W--~~P~C~~ 128 (129)
T 3r62_A 75 YNIA---LRWR------AKQKLYSRTGESVEFVCKRGYRLSSRSH--TLRTTCW-DGKL--EYPTCAK 128 (129)
T ss_dssp HTEE---ETTT------TTCCSEECTTCEEEEEECTTEEECTTSC--CSEEECB-TTBC--CCCCEEE
T ss_pred ccee---eeec------ccccccccCCCEEEEEeCCCccccCCCC--cceEEeC-CCcC--CCceeee
Confidence 3111 1111 011234 689999999999999999861 0248999 8999 5899986
No 54
>3r62_A H factor 1, complement factor H; immunity, repeating sushi domain, regulator of C activation, C3D, immune system; 1.52A {Homo sapiens} PDB: 2bzm_A 3oxu_D 3rj3_D 2g7i_A 3kxv_A 3kzj_A 2xqw_C
Probab=99.59 E-value=1.1e-15 Score=137.80 Aligned_cols=107 Identities=24% Similarity=0.447 Sum_probs=85.0
Q ss_pred CCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceec
Q psy833 178 GPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEG 257 (642)
Q Consensus 178 ~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~ 257 (642)
.+.|+.|+.+.||.+... ....|.+|++|+|+|++||.|.|... ++|+ +|+|+ ..|.|+.
T Consensus 4 ~~~C~~p~~~~nG~~~~~-------------~~~~~~~g~~v~y~C~~Gy~l~G~~~-----~~C~-~g~Ws-~~p~C~~ 63 (129)
T 3r62_A 4 FGKCGPPPPIDNGDITSF-------------PLSVYAPASSVEYQCQNLYQLEGNKR-----ITCR-NGQWS-EPPKCLH 63 (129)
T ss_dssp -CCBCSCCCBTTEEESSC-------------CCSSBCTTCEEEEEECTTCEEESCSE-----EEEE-TTEEC-CCCEEEC
T ss_pred cccCcCCCCCCCCEEecC-------------CCCcCCCCCEEEEECCCCCEeCCCCe-----eEcC-CCcCC-CCCCccC
Confidence 467999999999983221 11458999999999999999999864 8999 99999 8899998
Q ss_pred CcCCCCCCCCCcE-EEc--cC-Cccc-cccCCCCCEEEEEccCCCeEEeCCC---ceeeCC
Q psy833 258 PVCSDPGRPVDGY-QVA--TS-YEQV-RYDDEQGSEVQFGCNKPGYILINPR---PITCVR 310 (642)
Q Consensus 258 ~~C~~p~~~~~g~-~~~--~~-~~~~-~~~~~~gs~~~~~C~~~Gy~l~G~~---~~~C~~ 310 (642)
.|+.|+.+.||. +.. .. ...+ + +|++|+|+|+ +||.|.|+. .++|++
T Consensus 64 -~C~~p~~~~~g~~i~~~~~~~~~~y~~----~g~~v~f~C~-~Gy~l~G~~~~~~~~C~~ 118 (129)
T 3r62_A 64 -PCVISREIMENYNIALRWRAKQKLYSR----TGESVEFVCK-RGYRLSSRSHTLRTTCWD 118 (129)
T ss_dssp -CEECCHHHHHHHTEEETTTTTCCSEEC----TTCEEEEEEC-TTEEECTTSCCSEEECBT
T ss_pred -cCCCChhhhcccceeeeeccccccccc----CCCEEEEEeC-CCccccCCCCcceEEeCC
Confidence 899987777772 321 11 1111 2 7999999999 999999998 999996
No 55
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.59 E-value=3.1e-15 Score=159.76 Aligned_cols=113 Identities=22% Similarity=0.495 Sum_probs=94.7
Q ss_pred CcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEec----cCCeecCCCCc
Q psy833 179 PVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQ----ANGIWDFGDLR 254 (642)
Q Consensus 179 ~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~----~~G~Ws~~~P~ 254 (642)
+.|+.|+.+.||.+.. . ...|.+|++|+|+|+.||.|.|.+. ++|+ .+|+|++..|.
T Consensus 2 i~C~~p~~~~nG~~~~------~--------~~~~~~g~~~~y~C~~Gy~l~G~~~-----~~C~~~~~~~g~Ws~~~P~ 62 (376)
T 2aty_A 2 ISCGSPPPILNGRISY------Y--------STPIAVGTVIRYSCSGTFRLIGEKS-----LLCITKDKVDGTWDKPAPK 62 (376)
T ss_pred CCCcCCCCCCCCEEec------c--------CCcccCCCEEEEEeCCCCEEcCCCc-----eEEeccCCCCCeECCCCCc
Confidence 5799999999998322 1 1358999999999999999999975 8999 79999999999
Q ss_pred eec----CcCCCCCCCCCcEEEcc-CCccccccCCCCCEEEEEccCCCeEEeCCCceeeCC--------CCceEEec
Q psy833 255 CEG----PVCSDPGRPVDGYQVAT-SYEQVRYDDEQGSEVQFGCNKPGYILINPRPITCVR--------EPECKIIK 318 (642)
Q Consensus 255 C~~----~~C~~p~~~~~g~~~~~-~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~~--------~P~C~~v~ 318 (642)
|+. +.|+.|..+.++.+... .+. +|++|+|+|+ +||.|.|+..++|+. .|.|+++.
T Consensus 63 C~~~~~~~~C~~p~~~~~~~~~~~~~~~-------~g~~~~~~C~-~gy~l~G~~~~~C~~~g~Ws~~~~p~C~~~~ 131 (376)
T 2aty_A 63 CEYFNKYSSCPEPIVPGGYKIRGSTPYR-------HGDSVTFACK-TNFSMNGNKSVWCQANNMWGPTRLPTCVSVF 131 (376)
T ss_pred cccccCccEeCCCcCCCCeEecCCCCcc-------CCCEEEEECC-CCCEECCCcCeEECCCCEECCCCCCEeEccC
Confidence 998 68999988877777652 344 9999999999 999999999999995 36666664
No 56
>4ayi_A H factor 1, complement factor H; immune system, antigens; 2.31A {Homo sapiens} PDB: 4aye_A 4ayd_A 4aym_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=99.55 E-value=1.4e-15 Score=136.06 Aligned_cols=109 Identities=18% Similarity=0.448 Sum_probs=78.0
Q ss_pred cCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCceecCc
Q psy833 180 VCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPV 259 (642)
Q Consensus 180 ~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~~~~ 259 (642)
.|..| .+.||.+...... .....+.+|++|+|+|++||+|.|.+.+ ..++|+++| |+ ..|.|+++.
T Consensus 6 ~C~~P-~i~nG~~~~~~~~---------~~~~p~~~G~~v~y~C~~Gy~l~g~~~~--~~~~C~~~g-Ws-~~P~C~~~~ 71 (125)
T 4ayi_A 6 PCDYP-DIKHGGLYHENMR---------RPYFPVAVGKYYSYYCDEHFETPSGSYW--DHIHCTQDG-WS-PAVPCLRKC 71 (125)
T ss_dssp CBCSC-CCTTEEETTHHHH---------GGGCSBCTTCEEEEEECTTEECTTSSSE--EEEEEETTE-EE-SSSCCEEEE
T ss_pred cCcCC-ccCCCEEeccccc---------cccccccCCCEEEEEcCCCCEECCCCcc--CEEEeCCCc-cc-CCCCCcCcC
Confidence 58766 5789983321100 0001136799999999999999998642 358999988 99 568899877
Q ss_pred CCCCCCCCCcEEEccCCccccccCCCCCEEEEEccCCCeEEe-CCCceeeCC
Q psy833 260 CSDPGRPVDGYQVATSYEQVRYDDEQGSEVQFGCNKPGYILI-NPRPITCVR 310 (642)
Q Consensus 260 C~~p~~~~~g~~~~~~~~~~~~~~~~gs~~~~~C~~~Gy~l~-G~~~~~C~~ 310 (642)
|. +.+.||.+..... .+. +|++|+|+|+ +||.|+ |+.+++|++
T Consensus 72 c~--P~i~nG~~~~~~~-~y~----~g~~v~y~C~-~Gy~l~~g~~~~~C~~ 115 (125)
T 4ayi_A 72 YF--PYLENGYNQNHGR-KFV----QGKSIDVACH-PGYALPKAQTTVTCME 115 (125)
T ss_dssp EC--CCCTTBCCTTTTC-EEE----TTCEEECCBC-TTCCCGGGCCEEEEET
T ss_pred CC--CCCCCCEEeCCCC-ccc----CCCEEEEEcC-CCCEeCCCCceEEECC
Confidence 74 3577998764321 122 8999999999 999996 788888876
No 57
>4ayi_A H factor 1, complement factor H; immune system, antigens; 2.31A {Homo sapiens} PDB: 4aye_A 4ayd_A 4aym_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=99.54 E-value=2.5e-15 Score=134.46 Aligned_cols=112 Identities=21% Similarity=0.438 Sum_probs=81.6
Q ss_pred CCCCCCCCCCCCccceecCCC---------CeeeEEeCCCCeeccCCcCCCCceEecccCCeeecCCCCccCCcCCCCCC
Q psy833 116 RNFCRVPTPGAEYGNFLDTRY---------QSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGR 186 (642)
Q Consensus 116 ~~~C~~~~~~p~nG~~~~~~~---------~~~~~~~C~~Gy~l~g~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~ 186 (642)
.+.|.. +.++||.+..... ...++|+|++||.|.|.+ ....++|+++| |+ +.|.|+++.|.+ .
T Consensus 4 ~k~C~~--P~i~nG~~~~~~~~~~~~p~~~G~~v~y~C~~Gy~l~g~~--~~~~~~C~~~g-Ws-~~P~C~~~~c~P--~ 75 (125)
T 4ayi_A 4 LKPCDY--PDIKHGGLYHENMRRPYFPVAVGKYYSYYCDEHFETPSGS--YWDHIHCTQDG-WS-PAVPCLRKCYFP--Y 75 (125)
T ss_dssp --CBCS--CCCTTEEETTHHHHGGGCSBCTTCEEEEEECTTEECTTSS--SEEEEEEETTE-EE-SSSCCEEEEECC--C
T ss_pred CccCcC--CccCCCEEeccccccccccccCCCEEEEEcCCCCEECCCC--ccCEEEeCCCc-cc-CCCCCcCcCCCC--C
Confidence 456763 4678998865421 122399999999999975 01147999998 99 569999887743 4
Q ss_pred CCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCcccc-CCccCCCceEEeccCCeecCCCCcee
Q psy833 187 PVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLA-GQTDKNDNVVRCQANGIWDFGDLRCE 256 (642)
Q Consensus 187 ~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~-G~~~~~~~~~~C~~~G~Ws~~~P~C~ 256 (642)
+.||.+... ...|.+|++|+|+|++||+|. |++ .++|+++| |+ +.|+|.
T Consensus 76 i~nG~~~~~--------------~~~y~~g~~v~y~C~~Gy~l~~g~~-----~~~C~~~g-Ws-~~P~Cv 125 (125)
T 4ayi_A 76 LENGYNQNH--------------GRKFVQGKSIDVACHPGYALPKAQT-----TVTCMENG-WS-PTPRCI 125 (125)
T ss_dssp CTTBCCTTT--------------TCEEETTCEEECCBCTTCCCGGGCC-----EEEEETTE-EE-SCCCCC
T ss_pred CCCCEEeCC--------------CCcccCCCEEEEEcCCCCEeCCCCc-----eEEECCCc-cc-CcCEeC
Confidence 679973211 145789999999999999997 665 48999888 99 578884
No 58
>2yby_A Complement factor H; immune system, complement regulation, innate immunity, infec; 1.58A {Mus musculus}
Probab=99.53 E-value=3.3e-15 Score=133.54 Aligned_cols=109 Identities=20% Similarity=0.358 Sum_probs=81.9
Q ss_pred CcCCCCCCCCCceeeecceeeeeeCCcCCCCcccc--ccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCcee
Q psy833 179 PVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDT--RYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCE 256 (642)
Q Consensus 179 ~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~--~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C~ 256 (642)
+.|+.| .+.||.+.... .....| .+|++|+|+|++||+|.|... +..++|+++| |++. |.|+
T Consensus 3 ~~C~~P-~i~nG~~~~~~-----------~~~~~yp~~~g~~v~y~C~~Gy~l~g~~~--~~~~~C~~~g-Ws~~-p~C~ 66 (124)
T 2yby_A 3 KPCEFP-QFKYGRLYYEE-----------SLRPNFPVSIGNKYSYKCDNGFSPPSGYS--WDYLRCTAQG-WEPE-VPCV 66 (124)
T ss_dssp CCBCCC-CCTTEEETTHH-----------HHGGGCSBCTTCEEEEEECTTEECTTCSS--CEEEEEETTE-EESS-SCCE
T ss_pred ccCCCC-cccCCEEEecc-----------cccccccccCCCEEEEECCCCCEeCCCCC--ccEEEecCCC-ccCC-Ccee
Confidence 468876 88999833210 000123 789999999999999999821 0148999999 9985 9999
Q ss_pred cCcCCCCCCCCCcEEEccCCccccccCCCCCEEEEEccCCCeEEeCCCc-eeeCCC
Q psy833 257 GPVCSDPGRPVDGYQVATSYEQVRYDDEQGSEVQFGCNKPGYILINPRP-ITCVRE 311 (642)
Q Consensus 257 ~~~C~~p~~~~~g~~~~~~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~-~~C~~~ 311 (642)
+.|+. +.+.||.+.... ..+. +|++|+|+|+ +||.|.|... ++|+.+
T Consensus 67 -~~C~~-p~~~nG~~~~~~-~~y~----~g~~v~~~C~-~Gy~l~G~~~~~~C~~~ 114 (124)
T 2yby_A 67 -RKCVF-HYVENGDSAYWE-KVYV----QGQSLKVQCY-NGYSLQNGQDTMTCTEN 114 (124)
T ss_dssp -EEEEE-CCCBTBCCCSSC-EEEE----TTCEEECCBC-TTCCCSSSSCEEEEETT
T ss_pred -eECcC-CCCCCCeEeccc-Cccc----CCCEEEEECC-CCCEecCCCCeEEcCCC
Confidence 79997 577899875422 1111 7999999999 9999999985 999985
No 59
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.51 E-value=1e-13 Score=149.48 Aligned_cols=125 Identities=17% Similarity=0.269 Sum_probs=91.0
Q ss_pred CCeeecCCCCccCCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCcc-CCCceEEecc
Q psy833 166 NGIWDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTD-KNDNVVRCQA 244 (642)
Q Consensus 166 ~G~Ws~~~p~C~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~-~~~~~~~C~~ 244 (642)
+.-|+. .+.|+++.|+.|..+.||.+. +. ...|.+|++|+|+|++||.|.+... .....++|++
T Consensus 3 ~~gw~~-~~~c~~~~C~~p~~~~ng~~~------~~--------~~~~~~g~~v~~~C~~Gy~l~~g~~~~g~~~~~C~~ 67 (403)
T 1zjk_A 3 MTGWKI-HYTSTAHACPYPMAPPNGHVS------PV--------QAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQK 67 (403)
T ss_dssp -----------CCCCBCCCCCCTTEEES------SC--------CSCBCTTCEEEEEECTTEEEEETTEECSCCEEEBCS
T ss_pred CCceEE-EEEECCccCcCCCCCCCceEc------cc--------CCccccCCEEEEEeCCCCEEccCCCcCCceeeEcCC
Confidence 345985 589999999999999999832 21 1358999999999999999943210 0012489999
Q ss_pred CCeecCCCCceecCcCCCCCCCCCcEEEccC-CccccccCCCCCEEEEEccCCCe-EEeCC-CceeeCC
Q psy833 245 NGIWDFGDLRCEGPVCSDPGRPVDGYQVATS-YEQVRYDDEQGSEVQFGCNKPGY-ILINP-RPITCVR 310 (642)
Q Consensus 245 ~G~Ws~~~P~C~~~~C~~p~~~~~g~~~~~~-~~~~~~~~~~gs~~~~~C~~~Gy-~l~G~-~~~~C~~ 310 (642)
+|+|++..|.|+.+.|+.|+.+.||.+.... ...+. +|++|+|+|+ +|| .|.|. ..++|..
T Consensus 68 ~g~Ws~~~p~C~~~~C~~p~~~~ng~~~~~~~~~~~~----~g~~v~~~C~-~gyy~l~~~~~~~~C~~ 131 (403)
T 1zjk_A 68 DGSWDRPMPACSIVDCGPPDDLPSGRVEYITGPGVTT----YKAVIQYSCE-ETFYTMKVNDGKYVCEA 131 (403)
T ss_dssp SSSBSSCCCEEEECBCCSCCCCTTEEEEESSSTTCCB----TTCEEEEEEC-TTTEEEESSCSEEEECT
T ss_pred CCEeCCCCCCcccccCCCCCCcCCccEEEccCCCCCc----cCCeEEEeCC-CchhheecCCCCEEECC
Confidence 9999999999999999999999999987421 11122 9999999999 994 78887 7899986
No 60
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.49 E-value=5.1e-14 Score=151.74 Aligned_cols=127 Identities=21% Similarity=0.373 Sum_probs=101.7
Q ss_pred CCCCCCCCCCCCccceecCCCCeee----EEeCCCCeec------cCCcCCCCceEecccCCeeecCCCCccCCcCCCCC
Q psy833 116 RNFCRVPTPGAEYGNFLDTRYQSSF----FFGCQDTFKL------AGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPG 185 (642)
Q Consensus 116 ~~~C~~~~~~p~nG~~~~~~~~~~~----~~~C~~Gy~l------~g~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~ 185 (642)
...|+ .+..|.||.+.+....|.+ .|+|++||.| .|+. .++|+.+|+|+...|.|+++.|+.|+
T Consensus 14 ~~~C~-~p~~~~ng~~~~~~~~~~~g~~v~~~C~~Gy~l~~g~~~~g~~-----~~~C~~~g~Ws~~~p~C~~~~C~~p~ 87 (403)
T 1zjk_A 14 AHACP-YPMAPPNGHVSPVQAKYILKDSFSIFCETGYELLQGHLPLKSF-----TAVCQKDGSWDRPMPACSIVDCGPPD 87 (403)
T ss_dssp CCCBC-CCCCCTTEEESSCCSCBCTTCEEEEEECTTEEEEETTEECSCC-----EEEBCSSSSBSSCCCEEEECBCCSCC
T ss_pred CccCc-CCCCCCCceEcccCCccccCCEEEEEeCCCCEEccCCCcCCce-----eeEcCCCCEeCCCCCCcccccCCCCC
Confidence 46787 6688999999876544433 9999999999 4566 89999999999999999999999999
Q ss_pred CCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCc-cccCCccCCCceEEeccCCeecC-----CCCceecCc
Q psy833 186 RPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTF-KLAGQTDKNDNVVRCQANGIWDF-----GDLRCEGPV 259 (642)
Q Consensus 186 ~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy-~l~G~~~~~~~~~~C~~~G~Ws~-----~~P~C~~~~ 259 (642)
.+.||.+.. ... ...+.||++|+|+|++|| +|.|... .++|.++|.|+. ..|.|+. .
T Consensus 88 ~~~ng~~~~------~~~------~~~~~~g~~v~~~C~~gyy~l~~~~~----~~~C~~~g~W~~~~~~~~~p~C~~-~ 150 (403)
T 1zjk_A 88 DLPSGRVEY------ITG------PGVTTYKAVIQYSCEETFYTMKVNDG----KYVCEADGFWTSSKGEKSLPVCEP-V 150 (403)
T ss_dssp CCTTEEEEE------SSS------TTCCBTTCEEEEEECTTTEEEESSCS----EEEECTTSCEEETTCCCSCCEEEE-C
T ss_pred CcCCccEEE------ccC------CCCCccCCeEEEeCCCchhheecCCC----CEEECCCcccccccCCccCCCCCC-C
Confidence 999998321 110 134789999999999995 7777631 389999999997 4889987 6
Q ss_pred CCCCCC
Q psy833 260 CSDPGR 265 (642)
Q Consensus 260 C~~p~~ 265 (642)
|+.+..
T Consensus 151 CG~~~~ 156 (403)
T 1zjk_A 151 CGLSAR 156 (403)
T ss_dssp CCCCSS
T ss_pred CCCCCC
Confidence 987754
No 61
>2ehf_A CUB and sushi domain-containing protein 1; CUB and sushi multiple domains protein 1, CSMD1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=3.1e-13 Score=108.69 Aligned_cols=69 Identities=28% Similarity=0.513 Sum_probs=62.3
Q ss_pred eecCCCCccCCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCee
Q psy833 169 WDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIW 248 (642)
Q Consensus 169 Ws~~~p~C~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~W 248 (642)
|++..|.|+.+.|+.|..+.||.+.. ..|.+|++|+|+|++||.|.|++. ++|+++|+|
T Consensus 2 ws~~~p~C~~~~C~~p~~p~nG~~~~----------------~~~~~g~~v~f~C~~Gy~L~G~~~-----~~C~~~g~W 60 (73)
T 2ehf_A 2 SSGSSGEIEKGGCGDPGIPAYGKRTG----------------SSFLHGDTLTFECPAAFELVGERV-----ITCQQNNQW 60 (73)
T ss_dssp CCCCCCCCCCCCSCCCCCCSSSEEEC----------------SCCCTTCEEEEECCSSCCBCSCSE-----EEBCSSSSB
T ss_pred CCCCCCeEeeeECcCCCCCCCCEEeC----------------CcccCCCEEEEEcCCCCEEeCCCe-----EEECCCCeE
Confidence 99999999999999999999998321 358999999999999999999974 899999999
Q ss_pred cCCCCceecC
Q psy833 249 DFGDLRCEGP 258 (642)
Q Consensus 249 s~~~P~C~~~ 258 (642)
++..|+|+.+
T Consensus 61 s~~~P~C~~~ 70 (73)
T 2ehf_A 61 SGNKPSCSGP 70 (73)
T ss_dssp SSCCCCBCCC
T ss_pred CCCCCeEecc
Confidence 9999999874
No 62
>2yra_A Seizure 6-like protein isoform 3; disulfide bond, sushi domain, SCR, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=2.6e-12 Score=103.52 Aligned_cols=70 Identities=19% Similarity=0.386 Sum_probs=59.7
Q ss_pred ccCCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCCCCce
Q psy833 176 CEGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRC 255 (642)
Q Consensus 176 C~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~P~C 255 (642)
+..+.|+.|+.+.||.+.. . ...|.+|++|+|+|++||+|.|+.. ++|+++|+|++..|.|
T Consensus 3 s~~~~C~~p~~~~nG~~~~------~--------~~~~~~g~~v~y~C~~Gy~L~G~~~-----~~C~~~g~Ws~~~P~C 63 (74)
T 2yra_A 3 SGSSGCSDLPEIQNGWKTT------S--------HTELVRGARITYQCDPGYDIVGSDT-----LTCQWDLSWSSDPPFC 63 (74)
T ss_dssp CCCCCCCCCCCCTTEEECC------S--------SSSCCTTCEEEEEECTTEEEESCSE-----EEBCTTSCBSSCCCEE
T ss_pred ccCCcCcCCCCCCCeEEec------c--------CCCccCCCEEEEECCCCCEECCCCc-----eEECCCCEECCCCCEE
Confidence 5667899999999998322 1 1358999999999999999999864 8999999999999999
Q ss_pred ecCcCCCCC
Q psy833 256 EGPVCSDPG 264 (642)
Q Consensus 256 ~~~~C~~p~ 264 (642)
+.+.|+.|+
T Consensus 64 ~~v~C~~P~ 72 (74)
T 2yra_A 64 EKTEESGPS 72 (74)
T ss_dssp EECSCCSSS
T ss_pred eecCCcCCC
Confidence 999998774
No 63
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.19 E-value=6.2e-11 Score=127.37 Aligned_cols=133 Identities=22% Similarity=0.428 Sum_probs=92.0
Q ss_pred CCCCCCCCCCcc-ceecCCCCeee----EEeCCCCeeccC-CcCCCCceEecccCCeeecCCCCccCCcCCCCCCCCCce
Q psy833 118 FCRVPTPGAEYG-NFLDTRYQSSF----FFGCQDTFKLAG-QTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGY 191 (642)
Q Consensus 118 ~C~~~~~~p~nG-~~~~~~~~~~~----~~~C~~Gy~l~g-~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~~g~ 191 (642)
.|+ .++.|.|| .+...+..|.+ .|+|++||+|.+ ........++|+.||+|+...|.|+.+.|+.|+.+.||.
T Consensus 2 ~C~-~p~~~~n~~~~~~~~~~y~~g~~v~~~C~~Gy~l~~g~~~~~s~~~~C~~~g~W~~~~p~C~~~~C~~p~~~~nG~ 80 (399)
T 1gpz_A 2 KCP-QPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRCKIKDCGQPRNLPNGD 80 (399)
T ss_dssp CBC-CCCCSSTTEEEESCCSSBCTTCEEEEEECTTEEEESSSCEESCEEEEBCTTSCBSSCCCEEEECBCCSCCCCTTEE
T ss_pred CCc-CCCCCCCCCCcCCCCCceecCCEEEEEecCCcEEecCCcccceeeEecCCCCcccCcCCceeeeeCCCCCCCCCcc
Confidence 466 55678885 44444444433 999999999954 220000167799999999999999988999999999997
Q ss_pred eeecceeeeeeCCcCCCCccccccCcEEEEEcccCc-cccCCc---cCCCceEEeccCCeecCC-----CCceecCcCCC
Q psy833 192 QVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTF-KLAGQT---DKNDNVVRCQANGIWDFG-----DLRCEGPVCSD 262 (642)
Q Consensus 192 ~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy-~l~G~~---~~~~~~~~C~~~G~Ws~~-----~P~C~~~~C~~ 262 (642)
+... .....+.+++++.|.|++|| ++.+.. ......++|..+|.|+.. .|.|.. .|+.
T Consensus 81 ~~~~------------~~~~~~~~~~~v~y~C~~gy~~l~~~~~~~~~~~g~~~C~~~g~w~~~~~~~~~p~C~~-~CG~ 147 (399)
T 1gpz_A 81 FRYT------------TTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLP-VCGK 147 (399)
T ss_dssp EEES------------SSTTCCBTTCEEEEEECTTTEEEEC-------CCCEEEECTTSSEEESSSCSSCCEEEE-CCSC
T ss_pred eEee------------cCCCCceeeEEEEEecCCchhccccccCcccccCceEEECCCceEeccccccccCCccC-CCCC
Confidence 3211 00034688999999999998 454321 000135899999999864 688987 5987
Q ss_pred CC
Q psy833 263 PG 264 (642)
Q Consensus 263 p~ 264 (642)
+.
T Consensus 148 ~~ 149 (399)
T 1gpz_A 148 PV 149 (399)
T ss_dssp CS
T ss_pred cC
Confidence 63
No 64
>2b5i_D Interleukin-2 receptor alpha chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 3nfp_I 3iu3_I 1z92_B 2erj_A*
Probab=99.15 E-value=7e-11 Score=112.75 Aligned_cols=115 Identities=18% Similarity=0.454 Sum_probs=81.6
Q ss_pred CCCCCCCCCCccceecCCC--CeeeEEeCCCCeeccC--CcCCCCceEecccCC---eeecCCCCccCC-----------
Q psy833 118 FCRVPTPGAEYGNFLDTRY--QSSFFFGCQDTFKLAG--QTDKNDNVVRCQANG---IWDFGDLRCEGP----------- 179 (642)
Q Consensus 118 ~C~~~~~~p~nG~~~~~~~--~~~~~~~C~~Gy~l~g--~~~~~~~~~~C~~~G---~Ws~~~p~C~~~----------- 179 (642)
.|..+++.+.|+.+..... ...+.|.|+.||.+.+ +. .++|+.++ +|+. .+.|.+.
T Consensus 2 ~C~g~PP~l~nA~~~~~~Y~~Gt~V~Y~C~~Gf~r~~~~s~-----~i~C~~~~~~~~Wt~-~~fC~~~~~~~~~~~v~p 75 (217)
T 2b5i_D 2 LCDDDPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSL-----YMLCTGNSSHSSWDN-QCQCTSSATRQTTKQVTP 75 (217)
T ss_dssp CCCSCCCCCTTEEEECSSBCTTCEEECCCCTTEEECTTCCS-----EEEBC-----CCBSC-CCCEEEC-----------
T ss_pred CCCCCCCCCccccccCccCCCCCEEEEECCCCceeCCCCCc-----eEEecCCCCcccccC-CceeecccccCccccccc
Confidence 3533567788887754322 2234999999998764 56 89997776 5987 6777432
Q ss_pred ---------------------------cCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCc--ccc
Q psy833 180 ---------------------------VCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTF--KLA 230 (642)
Q Consensus 180 ---------------------------~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy--~l~ 230 (642)
.|..|+.+.|+. +.. ...|.+|++|.|.|++|| .|.
T Consensus 76 ~~~e~~~~k~t~~q~~~~~~~~~n~~~~C~~PP~i~n~~-l~~--------------~~~y~~Gs~V~Y~C~eGY~~ll~ 140 (217)
T 2b5i_D 76 QPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEA-TER--------------IYHFVVGQMVYYQCVQGYRALHR 140 (217)
T ss_dssp ---------------------------CBCCCCCCSSCC-SSC--------------CEECCTTCEEEEEECTTCEEEES
T ss_pred CchhhccccccccccccCccccccccccCCCCCcccccc-ccc--------------cccccCCCEEEEECcCCchhccc
Confidence 477777777775 211 145899999999999999 479
Q ss_pred CCccCCCceEEecc-CC--eecCCCCceecC
Q psy833 231 GQTDKNDNVVRCQA-NG--IWDFGDLRCEGP 258 (642)
Q Consensus 231 G~~~~~~~~~~C~~-~G--~Ws~~~P~C~~~ 258 (642)
|+.. ++|.. +| .|+.++|.|+..
T Consensus 141 G~~~-----~~C~~~~G~~~WS~p~p~C~~~ 166 (217)
T 2b5i_D 141 GPAE-----SVCKMTHGKTRWTQPQLICTGE 166 (217)
T ss_dssp SCSE-----EEEEECSSCEEECCCCEEEEC-
T ss_pred CCcc-----eEeecCCCccccCCCCcceEec
Confidence 9864 89975 56 899999999874
No 65
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.13 E-value=2e-10 Score=123.35 Aligned_cols=114 Identities=18% Similarity=0.313 Sum_probs=85.3
Q ss_pred CcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccC-CccCCCceEEeccCCeecCCCCceec
Q psy833 179 PVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAG-QTDKNDNVVRCQANGIWDFGDLRCEG 257 (642)
Q Consensus 179 ~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G-~~~~~~~~~~C~~~G~Ws~~~P~C~~ 257 (642)
+.|+.|+.+.||.++.. ....|.+|++|.|+|++||+|.+ ........++|+.+|+|+...|.|+.
T Consensus 1 i~C~~p~~~~n~~~~~~-------------~~~~y~~g~~v~~~C~~Gy~l~~g~~~~~s~~~~C~~~g~W~~~~p~C~~ 67 (399)
T 1gpz_A 1 IKCPQPKTLDEFTIIQN-------------LQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRCKI 67 (399)
T ss_dssp CCBCCCCCSSTTEEEES-------------CCSSBCTTCEEEEEECTTEEEESSSCEESCEEEEBCTTSCBSSCCCEEEE
T ss_pred CCCcCCCCCCCCCCcCC-------------CCCceecCCEEEEEecCCcEEecCCcccceeeEecCCCCcccCcCCceee
Confidence 36999999999652321 11458999999999999999964 32111134789999999999999999
Q ss_pred CcCCCCCCCCCcEEEccCC-ccccccCCCCCEEEEEccCCCe-EEeC--------CCceeeCC
Q psy833 258 PVCSDPGRPVDGYQVATSY-EQVRYDDEQGSEVQFGCNKPGY-ILIN--------PRPITCVR 310 (642)
Q Consensus 258 ~~C~~p~~~~~g~~~~~~~-~~~~~~~~~gs~~~~~C~~~Gy-~l~G--------~~~~~C~~ 310 (642)
+.|+.|+.+.||.+..... ..+. +++.++|.|+ +|| .|.+ ...++|..
T Consensus 68 ~~C~~p~~~~nG~~~~~~~~~~~~----~~~~v~y~C~-~gy~~l~~~~~~~~~~~g~~~C~~ 125 (399)
T 1gpz_A 68 KDCGQPRNLPNGDFRYTTTMGVNT----YKARIQYYCH-EPYYKMQTRAGSRESEQGVYTCTA 125 (399)
T ss_dssp CBCCSCCCCTTEEEEESSSTTCCB----TTCEEEEEEC-TTTEEEEC-------CCCEEEECT
T ss_pred eeCCCCCCCCCcceEeecCCCCce----eeEEEEEecC-CchhccccccCcccccCceEEECC
Confidence 9999999999998764221 1112 8999999999 998 4543 45778885
No 66
>3tvj_A Mannan-binding lectin serine protease 2 A chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens}
Probab=99.12 E-value=1.2e-10 Score=96.52 Aligned_cols=73 Identities=21% Similarity=0.351 Sum_probs=58.7
Q ss_pred CccCCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccC-ccccCC-ccCCCceEEeccCCeec---
Q psy833 175 RCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDT-FKLAGQ-TDKNDNVVRCQANGIWD--- 249 (642)
Q Consensus 175 ~C~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~G-y~l~G~-~~~~~~~~~C~~~G~Ws--- 249 (642)
.|+.+.|+.|+.+.||.+... . ....|.||++|+|+|++| |.|.|. . .++|+++|+|+
T Consensus 2 ~C~~v~C~~P~~~~nG~~~~~------~------~~~~~~~gs~v~y~C~~g~y~l~g~~~-----~~~C~~~G~Ws~~~ 64 (86)
T 3tvj_A 2 SMTIVDCGPPDDLPSGRVEYI------T------GPGVTTYKAVIQYSCEETFYTMKVNDG-----KYVCDADGFWTSSK 64 (86)
T ss_dssp --CCCBCCSCCCCTTEEEEES------S------STTCCBTTCEEEEEECTTTEEECSSCC-----EEEECTTSSEEETT
T ss_pred eeeeeeCCCCCCCCCeEEEec------c------CCCcccCCCEEEEEcCCCceeccCCCC-----EEEECCCCCCCcCC
Confidence 699999999999999983311 0 013589999999999995 889998 5 38999999999
Q ss_pred --CCCCceecCcCCCCCC
Q psy833 250 --FGDLRCEGPVCSDPGR 265 (642)
Q Consensus 250 --~~~P~C~~~~C~~p~~ 265 (642)
..+|.|+++ |..|..
T Consensus 65 ~~~~~P~C~~v-Cg~P~~ 81 (86)
T 3tvj_A 65 GEKSLPVCEPV-CGLSAR 81 (86)
T ss_dssp SCCSCCCEEEC-CCCCCC
T ss_pred CCCCCCeeECc-CCCCCc
Confidence 689999996 998865
No 67
>1srz_A Gamma-aminobutyric acid type B receptor, subunit 1; GABA(B) receptor, CIS-trans isomerization, CCP module, sushi domain; NMR {Rattus norvegicus} SCOP: g.18.1.1 PDB: 1ss2_A
Probab=99.08 E-value=8e-11 Score=93.03 Aligned_cols=67 Identities=22% Similarity=0.389 Sum_probs=52.6
Q ss_pred CCCccCCcCC-CCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCC
Q psy833 173 DLRCEGPVCS-DPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFG 251 (642)
Q Consensus 173 ~p~C~~~~C~-~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~ 251 (642)
+|.|.. .|+ +++.+.||.+..+ +....|.+|++|+|+|++||.|.|++. ++|+ +|+|++.
T Consensus 1 ~~~C~~-~Cp~~~~~~~nG~~~~~------------~~~~~y~~g~~v~f~C~~Gy~L~G~~~-----~~C~-~g~Ws~~ 61 (68)
T 1srz_A 1 EAEFVR-ICSKSYLTLENGKVFLT------------GGDLPALDGARVEFRCDPDFHLVGSSR-----SVCS-QGQWSTP 61 (68)
T ss_dssp CCCSSS-SCCGGGGEETTEEEECC------------CCSCSTTTTCEEEEEECTTEEECSCCE-----EEEE-TTEESSC
T ss_pred CCccee-ECCCCCCCCCCCEEEec------------CCCCceeCCCEEEEECCCCCEEeCCCc-----CEEC-CCEEeCC
Confidence 467874 695 5677899983321 111347899999999999999999975 8999 9999999
Q ss_pred CCceecC
Q psy833 252 DLRCEGP 258 (642)
Q Consensus 252 ~P~C~~~ 258 (642)
.|.|+.+
T Consensus 62 ~P~C~~i 68 (68)
T 1srz_A 62 KPHCQVN 68 (68)
T ss_dssp CCCEEEC
T ss_pred CCEeeEC
Confidence 9999864
No 68
>2ehf_A CUB and sushi domain-containing protein 1; CUB and sushi multiple domains protein 1, CSMD1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=2.1e-10 Score=91.97 Aligned_cols=67 Identities=30% Similarity=0.511 Sum_probs=59.8
Q ss_pred ecCCCCceecCcCCCCCCCCCcEEEccCCccccccCCCCCEEEEEccCCCeEEeCCCceeeCCCCceEEecCCCCCCccC
Q psy833 248 WDFGDLRCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQGSEVQFGCNKPGYILINPRPITCVREPECKIIKPLGLASGRI 327 (642)
Q Consensus 248 Ws~~~P~C~~~~C~~p~~~~~g~~~~~~~~~~~~~~~~gs~~~~~C~~~Gy~l~G~~~~~C~~~P~C~~v~p~~~~~g~~ 327 (642)
|++..|.|+.+.|+.|+.|.||.+....+. +|++|+|+|+ +||.|+|+..++|+++ +.|++..
T Consensus 2 ws~~~p~C~~~~C~~p~~p~nG~~~~~~~~-------~g~~v~f~C~-~Gy~L~G~~~~~C~~~---------g~Ws~~~ 64 (73)
T 2ehf_A 2 SSGSSGEIEKGGCGDPGIPAYGKRTGSSFL-------HGDTLTFECP-AAFELVGERVITCQQN---------NQWSGNK 64 (73)
T ss_dssp CCCCCCCCCCCCSCCCCCCSSSEEECSCCC-------TTCEEEEECC-SSCCBCSCSEEEBCSS---------SSBSSCC
T ss_pred CCCCCCeEeeeECcCCCCCCCCEEeCCccc-------CCCEEEEEcC-CCCEEeCCCeEEECCC---------CeECCCC
Confidence 999999999999999999999999865555 9999999999 9999999999999975 7888877
Q ss_pred CCCC
Q psy833 328 PDSS 331 (642)
Q Consensus 328 ~~~~ 331 (642)
|.+.
T Consensus 65 P~C~ 68 (73)
T 2ehf_A 65 PSCS 68 (73)
T ss_dssp CCBC
T ss_pred CeEe
Confidence 7653
No 69
>2yra_A Seizure 6-like protein isoform 3; disulfide bond, sushi domain, SCR, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.04 E-value=1.9e-10 Score=92.52 Aligned_cols=65 Identities=18% Similarity=0.366 Sum_probs=55.3
Q ss_pred CCCCCCCCCCCCCccceecCCCCee----eEEeCCCCeeccCCcCCCCceEecccCCeeecCCCCccCCcCCCCC
Q psy833 115 ARNFCRVPTPGAEYGNFLDTRYQSS----FFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCSDPG 185 (642)
Q Consensus 115 s~~~C~~~~~~p~nG~~~~~~~~~~----~~~~C~~Gy~l~g~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~ 185 (642)
....|. .++.|.||.+......+. +.|+|++||.|.|+. .++|+.+|+|+...|+|+.+.|+.|+
T Consensus 4 ~~~~C~-~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L~G~~-----~~~C~~~g~Ws~~~P~C~~v~C~~P~ 72 (74)
T 2yra_A 4 GSSGCS-DLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSD-----TLTCQWDLSWSSDPPFCEKTEESGPS 72 (74)
T ss_dssp CCCCCC-CCCCCTTEEECCSSSSCCTTCEEEEEECTTEEEESCS-----EEEBCTTSCBSSCCCEEEECSCCSSS
T ss_pred cCCcCc-CCCCCCCeEEeccCCCccCCCEEEEECCCCCEECCCC-----ceEECCCCEECCCCCEEeecCCcCCC
Confidence 357787 667899999987643333 399999999999999 99999999999999999999998775
No 70
>2b5i_D Interleukin-2 receptor alpha chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 3nfp_I 3iu3_I 1z92_B 2erj_A*
Probab=99.04 E-value=3.7e-10 Score=107.77 Aligned_cols=104 Identities=19% Similarity=0.401 Sum_probs=76.0
Q ss_pred cC-CCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCC---eecCCCCce
Q psy833 180 VC-SDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANG---IWDFGDLRC 255 (642)
Q Consensus 180 ~C-~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G---~Ws~~~P~C 255 (642)
.| ++|+.+.|+. +.. ..|..|++|.|.|+.||++.+... ..++|+.++ +|+. .+.|
T Consensus 2 ~C~g~PP~l~nA~-~~~---------------~~Y~~Gt~V~Y~C~~Gf~r~~~~s---~~i~C~~~~~~~~Wt~-~~fC 61 (217)
T 2b5i_D 2 LCDDDPPEIPHAT-FKA---------------MAYKEGTMLNCECKRGFRRIKSGS---LYMLCTGNSSHSSWDN-QCQC 61 (217)
T ss_dssp CCCSCCCCCTTEE-EEC---------------SSBCTTCEEECCCCTTEEECTTCC---SEEEBC-----CCBSC-CCCE
T ss_pred CCCCCCCCCcccc-ccC---------------ccCCCCCEEEEECCCCceeCCCCC---ceEEecCCCCcccccC-Ccee
Confidence 37 6788888987 221 459999999999999998876532 359997666 5997 6777
Q ss_pred ecC--------------------------------------cCCCCCCCCCcEEEccCCccccccCCCCCEEEEEccCCC
Q psy833 256 EGP--------------------------------------VCSDPGRPVDGYQVATSYEQVRYDDEQGSEVQFGCNKPG 297 (642)
Q Consensus 256 ~~~--------------------------------------~C~~p~~~~~g~~~~~~~~~~~~~~~~gs~~~~~C~~~G 297 (642)
.++ .|..|+.+.||.+... +.|.+|++|+|.|+ +|
T Consensus 62 ~~~~~~~~~~~v~p~~~e~~~~k~t~~q~~~~~~~~~n~~~~C~~PP~i~n~~l~~~------~~y~~Gs~V~Y~C~-eG 134 (217)
T 2b5i_D 62 TSSATRQTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERI------YHFVVGQMVYYQCV-QG 134 (217)
T ss_dssp EEC--------------------------------------CBCCCCCCSSCCSSCC------EECCTTCEEEEEEC-TT
T ss_pred ecccccCcccccccCchhhccccccccccccCccccccccccCCCCCcccccccccc------ccccCCCEEEEECc-CC
Confidence 542 4888877778754321 11229999999999 99
Q ss_pred e--EEeCCCceeeCC
Q psy833 298 Y--ILINPRPITCVR 310 (642)
Q Consensus 298 y--~l~G~~~~~C~~ 310 (642)
| .|+|+..++|..
T Consensus 135 Y~~ll~G~~~~~C~~ 149 (217)
T 2b5i_D 135 YRALHRGPAESVCKM 149 (217)
T ss_dssp CEEEESSCSEEEEEE
T ss_pred chhcccCCcceEeec
Confidence 9 478999999975
No 71
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=98.63 E-value=2.6e-08 Score=105.36 Aligned_cols=84 Identities=14% Similarity=0.287 Sum_probs=56.0
Q ss_pred CccCCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCC-CceEEeccCCeecCCCC
Q psy833 175 RCEGPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKN-DNVVRCQANGIWDFGDL 253 (642)
Q Consensus 175 ~C~~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~-~~~~~C~~~G~Ws~~~P 253 (642)
.|....|+.+..+.||.+..+. ..+.+|++|+|+|+.||+|.|...+. ...++|+.+|+|+...|
T Consensus 276 ~~~~~~C~~~~~p~~G~~~~~~--------------~~~~~g~~v~~~C~~GY~l~g~~~~~~~~~~~C~~~g~Ws~~~P 341 (361)
T 4aqb_A 276 RAAGNECPELQPPVHGKIEPSQ--------------AKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIP 341 (361)
T ss_dssp EEECCEECCCCCCTTEEEESCC--------------SSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCBSSCCC
T ss_pred EEccCCCCCCCCCCCCEEecCC--------------CCcccCCEEEEEeCCCeEEeCCCcccccCeeEECCCCeeCCCCC
Confidence 3556679889899999833221 45889999999999999999975310 01378999999999999
Q ss_pred ceecCcCCCCCCCCCcEEE
Q psy833 254 RCEGPVCSDPGRPVDGYQV 272 (642)
Q Consensus 254 ~C~~~~C~~p~~~~~g~~~ 272 (642)
.|+++.|+.|..+.||.+.
T Consensus 342 ~C~~~~Cg~p~~~~ng~vt 360 (361)
T 4aqb_A 342 TCKKNEIDLESELKSEQVT 360 (361)
T ss_dssp EEEECC-------------
T ss_pred eeeEEeCCCCCCCCCCccc
Confidence 9999999999999999874
No 72
>1srz_A Gamma-aminobutyric acid type B receptor, subunit 1; GABA(B) receptor, CIS-trans isomerization, CCP module, sushi domain; NMR {Rattus norvegicus} SCOP: g.18.1.1 PDB: 1ss2_A
Probab=98.59 E-value=1.5e-08 Score=79.76 Aligned_cols=57 Identities=23% Similarity=0.465 Sum_probs=45.7
Q ss_pred CCCCCCCCCCCccceecCC--CCe----eeEEeCCCCeeccCCcCCCCceEecccCCeeecCCCCccCC
Q psy833 117 NFCRVPTPGAEYGNFLDTR--YQS----SFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGP 179 (642)
Q Consensus 117 ~~C~~~~~~p~nG~~~~~~--~~~----~~~~~C~~Gy~l~g~~~~~~~~~~C~~~G~Ws~~~p~C~~~ 179 (642)
..|+.+++.+.||.+..+. ..| .+.|+|++||.|.|+. .++|+ +|+|+++.|.|+.+
T Consensus 6 ~~Cp~~~~~~~nG~~~~~~~~~~y~~g~~v~f~C~~Gy~L~G~~-----~~~C~-~g~Ws~~~P~C~~i 68 (68)
T 1srz_A 6 RICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGSS-----RSVCS-QGQWSTPKPHCQVN 68 (68)
T ss_dssp SSCCGGGGEETTEEEECCCCSCSTTTTCEEEEEECTTEEECSCC-----EEEEE-TTEESSCCCCEEEC
T ss_pred eECCCCCCCCCCCEEEecCCCCceeCCCEEEEECCCCCEEeCCC-----cCEEC-CCEEeCCCCEeeEC
Confidence 4574366788999998642 222 2399999999999999 99999 99999999999753
No 73
>1jma_B Herpesvirus entry mediator; V-type IG molecule and TNFR superfamily, viral protein; HET: NAG; 2.65A {Human herpesvirus 1} SCOP: g.24.1.1 g.24.1.1 PDB: 2aw2_B*
Probab=98.48 E-value=7.4e-08 Score=90.03 Aligned_cols=104 Identities=20% Similarity=0.446 Sum_probs=47.0
Q ss_pred CCCCccCCCCeeec-----CCCCCcccCCCCceecCC-CCCCceeC---CC--Cceec-CCCCccccccccCCCCCeecC
Q psy833 6 VPRCLHCPAGTFAG-----INQKTCTPCPRGFYQNND-RQGVCLKC---PM--GTYTR-EEGSKAVQECVPVCGYGTYSP 73 (642)
Q Consensus 6 ~~~C~~C~~G~~~~-----~~~~~C~~Cp~G~y~~~~-~~~~C~~C---p~--g~~~~-~~gs~~~~~C~~~C~~G~y~~ 73 (642)
...|..||+|+|.. .....|.+||.|+|++.. +...|++| +. |.+.. ...+++-.+| .|++|+|..
T Consensus 13 ~~~C~~CppG~~~~~~C~~~~~t~C~~Cp~GtY~~~~n~~~~C~~C~~C~~~~g~~~~~~Ct~t~~t~C--~C~~G~y~~ 90 (167)
T 1jma_B 13 SECCPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVC--GCSPGHFCI 90 (167)
T ss_dssp TBCCBCBCTTEEEEECCCSSSCCEEEECCTTEECSSCBCSSCCEECCCCCTTTTEEEEECCCSSSCCEE--EECTTEEEE
T ss_pred CcCCCCCCCCCEeccCCCCCCCCcCCcCCCCccccccCcCccccCCcccccCCCeEEeccCCCCCCCcc--cCCCCceec
Confidence 34688999999873 245688899999998853 34567766 44 55532 2233444567 599999976
Q ss_pred C-CCCCcc------cCCCCcccCCCC-CCCCCCCCCCCCceeeccC
Q psy833 74 T-GLVPCL------ECPRNSYTGEPP-VGGHKDCEACPANMFTYQP 111 (642)
Q Consensus 74 ~-g~~~C~------~C~~G~y~~~~p-~~g~~~C~~Cp~G~~~~~~ 111 (642)
. +...|. .|+.|++..... ......|..|+.|+|....
T Consensus 91 ~~~~~~C~~C~~~t~C~~G~~~~~~gt~~~dt~C~~C~~Gtfs~~~ 136 (167)
T 1jma_B 91 VQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQNCPPGTFSPNG 136 (167)
T ss_dssp ECC--CCSEEEECCC-------------------------------
T ss_pred CCCCCcCccccCcccCCCCCEEeccCCcCCCCccccCCCCceeCCC
Confidence 4 334454 456777654322 1235679899999887553
No 74
>3tvj_A Mannan-binding lectin serine protease 2 A chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens}
Probab=98.43 E-value=2.3e-07 Score=76.64 Aligned_cols=64 Identities=20% Similarity=0.400 Sum_probs=51.1
Q ss_pred CCCCCCCCCCCCccceecC--CCCee----eEEeCCCC-eeccCC-cCCCCceEecccCCeee-----cCCCCccCCcCC
Q psy833 116 RNFCRVPTPGAEYGNFLDT--RYQSS----FFFGCQDT-FKLAGQ-TDKNDNVVRCQANGIWD-----FGDLRCEGPVCS 182 (642)
Q Consensus 116 ~~~C~~~~~~p~nG~~~~~--~~~~~----~~~~C~~G-y~l~g~-~~~~~~~~~C~~~G~Ws-----~~~p~C~~~~C~ 182 (642)
...|. +++.+.||.+... ...+. +.|+|++| |.|.|. . .++|+++|+|+ ...|+|+++ |.
T Consensus 5 ~v~C~-~P~~~~nG~~~~~~~~~~~~~gs~v~y~C~~g~y~l~g~~~-----~~~C~~~G~Ws~~~~~~~~P~C~~v-Cg 77 (86)
T 3tvj_A 5 IVDCG-PPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDG-----KYVCDADGFWTSSKGEKSLPVCEPV-CG 77 (86)
T ss_dssp CCBCC-SCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEECSSCC-----EEEECTTSSEEETTSCCSCCCEEEC-CC
T ss_pred eeeCC-CCCCCCCeEEEeccCCCcccCCCEEEEEcCCCceeccCCCC-----EEEECCCCCCCcCCCCCCCCeeECc-CC
Confidence 45677 5678999998742 22232 39999996 789999 8 99999999999 689999998 99
Q ss_pred CCCC
Q psy833 183 DPGR 186 (642)
Q Consensus 183 ~p~~ 186 (642)
.|..
T Consensus 78 ~P~~ 81 (86)
T 3tvj_A 78 LSAR 81 (86)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 8865
No 75
>2hey_R Tumor necrosis factor receptor superfamily member; cytokine, receptor-ligan complex, CO-stimulator, TNFSF; 2.00A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 2hev_R
Probab=98.40 E-value=3.5e-07 Score=83.48 Aligned_cols=98 Identities=24% Similarity=0.507 Sum_probs=48.7
Q ss_pred CCccCCCCeeecCCCCCcccCCCCceec----CCCCCCceeCCCCceecCCCCccccccccCCCCC--eec-----CCCC
Q psy833 8 RCLHCPAGTFAGINQKTCTPCPRGFYQN----NDRQGVCLKCPMGTYTREEGSKAVQECVPVCGYG--TYS-----PTGL 76 (642)
Q Consensus 8 ~C~~C~~G~~~~~~~~~C~~Cp~G~y~~----~~~~~~C~~Cp~g~~~~~~gs~~~~~C~~~C~~G--~y~-----~~g~ 76 (642)
++..|+.|+|... +.-|..||+|+|.. ......|.+||+|+|+...+...|..|. .|..| .+. ....
T Consensus 3 ~~~~C~~g~Y~~~-g~CC~~C~pG~~~~~~Ct~~~~t~C~~C~~gty~~~~~~~~C~~C~-~C~~~~g~~~~~~Ct~t~d 80 (146)
T 2hey_R 3 HMLHCVGDTYPSN-DRCCHECRPGNGMVSRCSRSQNTVCRPCGPGFYNDVVSSKPCKPCT-WCNLRSGSERKQLCTATQD 80 (146)
T ss_dssp --CCBCSSEEEET-TEEEECBCTTEEEEECCCSSCCCEEEECCTTEECCSCBSSCCEECC-CCCGGGTEEEEECCBTTBC
T ss_pred cCCCCCCCCEeCC-CcCCCCCCCCCeecccCCCCCCCCcccCCCCCEECCCCCCcCcccC-CCCCCCCceEeccCccCCC
Confidence 4556666666642 22346666666653 2234566666666666655444444444 35553 221 1122
Q ss_pred CCcccCCCCcccCCCCCCCCCCCCCCCCceeec
Q psy833 77 VPCLECPRNSYTGEPPVGGHKDCEACPANMFTY 109 (642)
Q Consensus 77 ~~C~~C~~G~y~~~~p~~g~~~C~~Cp~G~~~~ 109 (642)
..|. |+.|+|... +......|.+|+.|+|..
T Consensus 81 t~C~-C~~G~y~~~-g~~~~~~C~~C~~Gtfs~ 111 (146)
T 2hey_R 81 TVCR-CRAGTQPLD-SYKPGVDCAPCPPGHFSP 111 (146)
T ss_dssp CEEE-ECTTEEESC-SSSTTSSEEECCTTEECC
T ss_pred cccc-CCCCeeeCC-CcccCcccccCCCCcccC
Confidence 3353 566655532 111234566666666554
No 76
>1jma_B Herpesvirus entry mediator; V-type IG molecule and TNFR superfamily, viral protein; HET: NAG; 2.65A {Human herpesvirus 1} SCOP: g.24.1.1 g.24.1.1 PDB: 2aw2_B*
Probab=98.34 E-value=2.2e-07 Score=86.76 Aligned_cols=87 Identities=24% Similarity=0.577 Sum_probs=60.4
Q ss_pred cCCCCeeecCCCCCcccCCCCceecC----CCCCCceeCCCCceecCC-CCccccccccCCCC--Ceec-----CCCCCC
Q psy833 11 HCPAGTFAGINQKTCTPCPRGFYQNN----DRQGVCLKCPMGTYTREE-GSKAVQECVPVCGY--GTYS-----PTGLVP 78 (642)
Q Consensus 11 ~C~~G~~~~~~~~~C~~Cp~G~y~~~----~~~~~C~~Cp~g~~~~~~-gs~~~~~C~~~C~~--G~y~-----~~g~~~ 78 (642)
.|+.|.|.. ++..|..||+|+|... .....|.+||+|+|+... +...|..|. .|++ |++. ......
T Consensus 3 ~C~~g~Y~~-~~~~C~~CppG~~~~~~C~~~~~t~C~~Cp~GtY~~~~n~~~~C~~C~-~C~~~~g~~~~~~Ct~t~~t~ 80 (167)
T 1jma_B 3 SCKEDEYPV-GSECCPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQ-MCDPAMGLRASRNCSRTENAV 80 (167)
T ss_dssp -CCTTBCCB-TTBCCBCBCTTEEEEECCCSSSCCEEEECCTTEECSSCBCSSCCEECC-CCCTTTTEEEEECCCSSSCCE
T ss_pred CCCCCCEEC-CCcCCCCCCCCCEeccCCCCCCCCcCCcCCCCccccccCcCccccCCc-ccccCCCeEEeccCCCCCCCc
Confidence 699999986 3568999999999853 356789999999999754 345677776 6887 7763 235556
Q ss_pred cccCCCCcccCCCCCCCCCCCCCCC
Q psy833 79 CLECPRNSYTGEPPVGGHKDCEACP 103 (642)
Q Consensus 79 C~~C~~G~y~~~~p~~g~~~C~~Cp 103 (642)
| .|+.|+|.... +...|..|.
T Consensus 81 C-~C~~G~y~~~~---~~~~C~~C~ 101 (167)
T 1jma_B 81 C-GCSPGHFCIVQ---DGDHCAACR 101 (167)
T ss_dssp E-EECTTEEEEEC---C--CCSEEE
T ss_pred c-cCCCCceecCC---CCCcCcccc
Confidence 7 78888887542 334555443
No 77
>1sg1_X Tumor necrosis factor receptor superfamily member 16; nerve growth factor, NGF, neurotrophin, common neurotrophin receptor; 2.40A {Rattus norvegicus} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 g.24.1.1 PDB: 3buk_C* 3ij2_X
Probab=98.30 E-value=7.7e-07 Score=82.67 Aligned_cols=100 Identities=22% Similarity=0.401 Sum_probs=43.5
Q ss_pred CccCCCCeeecC----CCCCcccCCCC-ceecCCC-CCCceeC---CCCceecCC-CCccccccccCCCCCeecCCCCCC
Q psy833 9 CLHCPAGTFAGI----NQKTCTPCPRG-FYQNNDR-QGVCLKC---PMGTYTREE-GSKAVQECVPVCGYGTYSPTGLVP 78 (642)
Q Consensus 9 C~~C~~G~~~~~----~~~~C~~Cp~G-~y~~~~~-~~~C~~C---p~g~~~~~~-gs~~~~~C~~~C~~G~y~~~g~~~ 78 (642)
|..||+|+|... ....|.+|+.| +|++..+ ...|++| +.|.+.... -++.-..|. |++|+|.......
T Consensus 16 C~~CppG~~~~~~C~~~~t~C~~C~~g~ty~~~~~~~~~C~~C~~C~~~~~~~~~Ct~t~d~~C~--C~~G~y~~~~~~~ 93 (161)
T 1sg1_X 16 CKACNLGEGVAQPCGANQTVCEPCLDNVTFSDVVSATEPCKPCTECLGLQSMSAPCVEADDAVCR--CAYGYYQDEETGH 93 (161)
T ss_dssp CCCBCTTEEEEECSSSSSCEEEECCTTTEECCSCBSSCCCEECCCCCTTEEEEECCBTTBCCEEE--ECTTEEECTTTCC
T ss_pred CCCCCcCCeECCcCCCCCCcCcCCcCCCccccCCCCCCcCcCCCCCCCcceeecCCCcccCceec--cCCCeEeCCCCcc
Confidence 455555555432 23445555555 5554332 2234433 234332111 111223442 6666666432222
Q ss_pred ---cccCCCCcccCCCC-CCCCCCCCCCCCceeecc
Q psy833 79 ---CLECPRNSYTGEPP-VGGHKDCEACPANMFTYQ 110 (642)
Q Consensus 79 ---C~~C~~G~y~~~~p-~~g~~~C~~Cp~G~~~~~ 110 (642)
|..|+.|++..... ......|.+|+.|+|...
T Consensus 94 C~~C~~C~~G~~v~~~ct~~~dt~C~~C~~Gtfs~~ 129 (161)
T 1sg1_X 94 CEACSVCEVGSGLVFSCQDKQNTVCEECPEGTYSDE 129 (161)
T ss_dssp EEECCCBCTTEEEEECCBTTBCCEEEECCTTEECCS
T ss_pred ccCCccCCCCCeecccCCCCCCCcccCCCCCceeCC
Confidence 34555665432211 123455666666665443
No 78
>2hey_R Tumor necrosis factor receptor superfamily member; cytokine, receptor-ligan complex, CO-stimulator, TNFSF; 2.00A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 2hev_R
Probab=98.27 E-value=1.1e-06 Score=80.07 Aligned_cols=88 Identities=23% Similarity=0.548 Sum_probs=63.9
Q ss_pred CccCCCCeeec-----CCCCCcccCCCCceecCCCCCCceeCC---CC--ceec-CCCCccccccccCCCCCeecCCC--
Q psy833 9 CLHCPAGTFAG-----INQKTCTPCPRGFYQNNDRQGVCLKCP---MG--TYTR-EEGSKAVQECVPVCGYGTYSPTG-- 75 (642)
Q Consensus 9 C~~C~~G~~~~-----~~~~~C~~Cp~G~y~~~~~~~~C~~Cp---~g--~~~~-~~gs~~~~~C~~~C~~G~y~~~g-- 75 (642)
|..||+|+|.. .....|.+||.|+|++..+...|++|. .+ .+.. ...+++-.+|. |++|||...|
T Consensus 19 C~~C~pG~~~~~~Ct~~~~t~C~~C~~gty~~~~~~~~C~~C~~C~~~~g~~~~~~Ct~t~dt~C~--C~~G~y~~~g~~ 96 (146)
T 2hey_R 19 CHECRPGNGMVSRCSRSQNTVCRPCGPGFYNDVVSSKPCKPCTWCNLRSGSERKQLCTATQDTVCR--CRAGTQPLDSYK 96 (146)
T ss_dssp EECBCTTEEEEECCCSSCCCEEEECCTTEECCSCBSSCCEECCCCCGGGTEEEEECCBTTBCCEEE--ECTTEEESCSSS
T ss_pred CCCCCCCCeecccCCCCCCCCcccCCCCCEECCCCCCcCcccCCCCCCCCceEeccCccCCCcccc--CCCCeeeCCCcc
Confidence 68999999974 345789999999999987777888764 43 3322 22344556674 9999999765
Q ss_pred -CCCcccCCCCcccCCCCCCCCCCCCCC
Q psy833 76 -LVPCLECPRNSYTGEPPVGGHKDCEAC 102 (642)
Q Consensus 76 -~~~C~~C~~G~y~~~~p~~g~~~C~~C 102 (642)
...|.+|+.|+|++. ....|.+|
T Consensus 97 ~~~~C~~C~~Gtfs~~----~~~~C~~~ 120 (146)
T 2hey_R 97 PGVDCAPCPPGHFSPG----DNQACKPW 120 (146)
T ss_dssp TTSSEEECCTTEECCS----TTCCCEEC
T ss_pred cCcccccCCCCcccCC----CCCCCcCC
Confidence 347999999999975 24566543
No 79
>3alq_R Tumor necrosis factor receptor superfamily member; ligand-receptor complex, cytokine, cytokine-cytokine recepto; 3.00A {Homo sapiens}
Probab=98.19 E-value=8.6e-07 Score=83.33 Aligned_cols=82 Identities=20% Similarity=0.303 Sum_probs=57.0
Q ss_pred CCccCCCCeeecC-CCCCcccCCCCceecCC----CCCCceeCCCCceecCCCC-ccccccccCCCCCeecC-----CCC
Q psy833 8 RCLHCPAGTFAGI-NQKTCTPCPRGFYQNND----RQGVCLKCPMGTYTREEGS-KAVQECVPVCGYGTYSP-----TGL 76 (642)
Q Consensus 8 ~C~~C~~G~~~~~-~~~~C~~Cp~G~y~~~~----~~~~C~~Cp~g~~~~~~gs-~~~~~C~~~C~~G~y~~-----~g~ 76 (642)
.+..|+.|+|.+. ++.-|..||+|+|.... +...|.+|++|+|+...+. ..|..|...|..|++.. ...
T Consensus 4 ~~~~C~~g~Y~~~~~~~cC~~C~pG~~~~~~C~~~~~t~C~~C~~gty~~~~n~~~~C~~C~~~C~~g~~~~~~Ct~t~d 83 (173)
T 3alq_R 4 PGSTCRLREYYDQTAQMCCSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQVETQACTREQN 83 (173)
T ss_dssp ---CCCTTEEEETTTTEEEECBCTTEEEEECCCSSCCCEEEECCTTEECCSSBCCSSCEECCCCCCTTEEEEECCCSSSC
T ss_pred CcCcCCCCccccCCCCcCCCCCCCCCeecccCCCCCCCcCCcCCCCccccCCCCCCccCCCCCcCCCCCEEecCCCCCCC
Confidence 4668999999864 45678899999998752 5688999999999976554 35666654688888742 234
Q ss_pred CCcccCCCCcccCC
Q psy833 77 VPCLECPRNSYTGE 90 (642)
Q Consensus 77 ~~C~~C~~G~y~~~ 90 (642)
..|. |..|+|...
T Consensus 84 ~~C~-C~~G~y~~~ 96 (173)
T 3alq_R 84 RICT-CRPGWYCAL 96 (173)
T ss_dssp CEEE-ECTTEEEEE
T ss_pred CeeE-CCCCeEecc
Confidence 4564 777777643
No 80
>3alq_R Tumor necrosis factor receptor superfamily member; ligand-receptor complex, cytokine, cytokine-cytokine recepto; 3.00A {Homo sapiens}
Probab=98.13 E-value=8.3e-07 Score=83.44 Aligned_cols=104 Identities=19% Similarity=0.432 Sum_probs=73.6
Q ss_pred CCCCccCCCCeeecC-----CCCCcccCCCCceecCCCC-CCceeCC----CCceecCC-CCccccccccCCCCCeecCC
Q psy833 6 VPRCLHCPAGTFAGI-----NQKTCTPCPRGFYQNNDRQ-GVCLKCP----MGTYTREE-GSKAVQECVPVCGYGTYSPT 74 (642)
Q Consensus 6 ~~~C~~C~~G~~~~~-----~~~~C~~Cp~G~y~~~~~~-~~C~~Cp----~g~~~~~~-gs~~~~~C~~~C~~G~y~~~ 74 (642)
..-|..|++|+|... +...|.+||.|+|++..+. ..|++|. .|.+.... -+++-..|. |++|||...
T Consensus 19 ~~cC~~C~pG~~~~~~C~~~~~t~C~~C~~gty~~~~n~~~~C~~C~~~C~~g~~~~~~Ct~t~d~~C~--C~~G~y~~~ 96 (173)
T 3alq_R 19 QMCCSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQVETQACTREQNRICT--CRPGWYCAL 96 (173)
T ss_dssp TEEEECBCTTEEEEECCCSSCCCEEEECCTTEECCSSBCCSSCEECCCCCCTTEEEEECCCSSSCCEEE--ECTTEEEEE
T ss_pred CcCCCCCCCCCeecccCCCCCCCcCCcCCCCccccCCCCCCccCCCCCcCCCCCEEecCCCCCCCCeeE--CCCCeEecc
Confidence 345889999999864 4578999999999987554 4687765 78775332 233345774 999999865
Q ss_pred C-C---CCc---ccCCCCcccCCCC-CCCCCCCCCCCCceeeccC
Q psy833 75 G-L---VPC---LECPRNSYTGEPP-VGGHKDCEACPANMFTYQP 111 (642)
Q Consensus 75 g-~---~~C---~~C~~G~y~~~~p-~~g~~~C~~Cp~G~~~~~~ 111 (642)
. . ..| ..|+.|++....+ ......|.+|+.|+|....
T Consensus 97 ~~~~~c~~C~~~~~C~~G~~v~~~~t~~~dt~C~~C~~Gtfs~~~ 141 (173)
T 3alq_R 97 SKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCKPCAPGTFSNTT 141 (173)
T ss_dssp ECSSSEEEEEECCCBCTTEEEEECCTTTSCCEEEECCTTEECCCC
T ss_pred CCCCCCCcccccCcCCCCeeEecCCcCCCCCcccCCCCCeecCCC
Confidence 2 1 245 6889998765432 2356789999999887643
No 81
>1ext_A Tumor necrosis factor receptor; binding protein, cytokine, signalling protein; 1.85A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1ft4_A* 1ncf_A 1tnr_R
Probab=98.10 E-value=7.9e-07 Score=82.60 Aligned_cols=44 Identities=36% Similarity=0.808 Sum_probs=22.2
Q ss_pred cCCCCeeec--CCCCCcccCCCCceecCC-----CCCCceeCCCCceecCC
Q psy833 11 HCPAGTFAG--INQKTCTPCPRGFYQNND-----RQGVCLKCPMGTYTREE 54 (642)
Q Consensus 11 ~C~~G~~~~--~~~~~C~~Cp~G~y~~~~-----~~~~C~~Cp~g~~~~~~ 54 (642)
.|+.|+|.. ..+.-|..||+|+|.... +...|.+||+|+|+...
T Consensus 4 ~C~~g~Y~~~~~~~~CC~~CppG~~~~~~Ct~~~~~t~C~~C~~gty~~~~ 54 (162)
T 1ext_A 4 VCPQGKYIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASE 54 (162)
T ss_dssp CCCTTEEECSSCTTCEEECBCTTEEEEECCSSTTSCCEEEECCTTEECCSS
T ss_pred cCCCCceeccCCCCCCCCCCCCCcccccccCCCCCCcccccCCCCcccccc
Confidence 455565554 123334556666655421 24456666666655543
No 82
>3me4_A Tumor necrosis factor receptor superfamily member; RANK, rankl, rankl-RANK complex, tnfsf11, tnfrsf11A, TNF SUP signaling protein; 2.01A {Mus musculus} PDB: 3me2_R 3qbq_B 4giq_R* 3nzy_B
Probab=98.10 E-value=1.7e-06 Score=83.79 Aligned_cols=45 Identities=20% Similarity=0.370 Sum_probs=22.2
Q ss_pred CCCCeecCCCCCCc---ccCCCCcccCCCC-CCCCCCCCCCCCceeecc
Q psy833 66 CGYGTYSPTGLVPC---LECPRNSYTGEPP-VGGHKDCEACPANMFTYQ 110 (642)
Q Consensus 66 C~~G~y~~~g~~~C---~~C~~G~y~~~~p-~~g~~~C~~Cp~G~~~~~ 110 (642)
|.+|||...+...| ..|+.|++..... ......|.+|+.|+|...
T Consensus 113 C~~G~y~~~~c~~C~~cs~C~pG~~v~~~ct~~~Dt~C~~C~~GtFs~~ 161 (216)
T 3me4_A 113 CTAGYHWNSDCECCRRNTECAPGFGAQHPLQLNKDTVCTPCLLGFFSDV 161 (216)
T ss_dssp ECTTEEEETTTTEEEECCCBCTTEEECSSEETTSCCCEEECCTTEECCS
T ss_pred CCCCeEccCCCcchhccccCCCCccccccCccCCCCccccCCCceecCC
Confidence 66666665433333 3555665443321 123345666666665443
No 83
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=98.04 E-value=1.9e-06 Score=91.02 Aligned_cols=74 Identities=12% Similarity=0.201 Sum_probs=48.7
Q ss_pred CCCCCCCCCCCccceecCCCCee----eEEeCCCCeeccCCcCCC-CceEecccCCeeecCCCCccCCcCCCCCCCCCce
Q psy833 117 NFCRVPTPGAEYGNFLDTRYQSS----FFFGCQDTFKLAGQTDKN-DNVVRCQANGIWDFGDLRCEGPVCSDPGRPVDGY 191 (642)
Q Consensus 117 ~~C~~~~~~p~nG~~~~~~~~~~----~~~~C~~Gy~l~g~~~~~-~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~~g~ 191 (642)
..|. .+..|.||.+......+. +.|+|++||+|.|...+. ...++|+.+|+|+.+.|.|+++.|+.|..+.||.
T Consensus 280 ~~C~-~~~~p~~G~~~~~~~~~~~g~~v~~~C~~GY~l~g~~~~~~~~~~~C~~~g~Ws~~~P~C~~~~Cg~p~~~~ng~ 358 (361)
T 4aqb_A 280 NECP-ELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCKKNEIDLESELKSEQ 358 (361)
T ss_dssp CEEC-CCCCCTTEEEESCCSSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCBSSCCCEEEECC-----------
T ss_pred CCCC-CCCCCCCCEEecCCCCcccCCEEEEEeCCCeEEeCCCcccccCeeEECCCCeeCCCCCeeeEEeCCCCCCCCCCc
Confidence 3576 557789999987765543 389999999999875100 0136899999999999999999999999999997
No 84
>3u3p_A Tumor necrosis factor receptor superfamily member; trigger apoptosis, apoptosis; 2.09A {Homo sapiens} PDB: 3u3q_A 3u3s_A 3u3t_A 3u3v_A 3qo4_A
Probab=97.99 E-value=3.1e-06 Score=85.36 Aligned_cols=101 Identities=23% Similarity=0.569 Sum_probs=65.3
Q ss_pred CCccCCCCeeecC-----CCCCcccCCCCceecCC-CCCCceeC----CCCceecCC-CCccccccccCCCCCeecCCC-
Q psy833 8 RCLHCPAGTFAGI-----NQKTCTPCPRGFYQNND-RQGVCLKC----PMGTYTREE-GSKAVQECVPVCGYGTYSPTG- 75 (642)
Q Consensus 8 ~C~~C~~G~~~~~-----~~~~C~~Cp~G~y~~~~-~~~~C~~C----p~g~~~~~~-gs~~~~~C~~~C~~G~y~~~g- 75 (642)
-|..|++|+|... ....|.+|+.|+|++.. +...|++| ..|.+.... -++.-..| .|.+|+|....
T Consensus 25 CC~~CpPGtyv~~~Ct~~~dt~C~pCp~GtYt~~~N~~~~C~~C~~~C~~g~~~~~~CT~TsDtvC--~C~~G~y~~~~~ 102 (313)
T 3u3p_A 25 TCDKCPAGTYVSEHCTNTSLRVCSSCPVGTFTRHENGIEKCHDCSQPCPWPMIEKLPCAALTDREC--TCPPGMFQSNAT 102 (313)
T ss_dssp EEECBCTTEEEEECCBTTBCCEEEECCTTEECCSCBCCSSCEECCCCCCTTCEEEECSBTTBCCEE--ECCTTEEEETTE
T ss_pred CCCCCCCCceecCcCCCCCCCccccCCCCceeccCCCCCcCcccccccCCCCEEecCCcCCCCccc--cCCCCceecccc
Confidence 4778999999653 24689999999999863 55677764 457664332 22233456 59999997653
Q ss_pred CCCcccCCCCcccCCCC-CCCCCCCCCCCCceeecc
Q psy833 76 LVPCLECPRNSYTGEPP-VGGHKDCEACPANMFTYQ 110 (642)
Q Consensus 76 ~~~C~~C~~G~y~~~~p-~~g~~~C~~Cp~G~~~~~ 110 (642)
-..|..|+.|++..... ......|..|+.|+|...
T Consensus 103 C~~Ct~CppG~gV~~~cT~tsDTvC~~Cp~GTFSd~ 138 (313)
T 3u3p_A 103 CAPHTVCPVGWGVRKKGTETEDVRCKQCARGTFSDV 138 (313)
T ss_dssp EEECCCBCTTEEEEECCCSSSCCEEEECCTTEECCS
T ss_pred ccccccCCCCCeeeecCCCCCCCccccCCCCeecCC
Confidence 12345777787554322 234567888888887554
No 85
>1sg1_X Tumor necrosis factor receptor superfamily member 16; nerve growth factor, NGF, neurotrophin, common neurotrophin receptor; 2.40A {Rattus norvegicus} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 g.24.1.1 PDB: 3buk_C* 3ij2_X
Probab=97.94 E-value=1.5e-05 Score=73.90 Aligned_cols=95 Identities=20% Similarity=0.414 Sum_probs=65.6
Q ss_pred cCCCCeeecCCCCCcccCCCCceecC---CCCCCceeCCCC-ceecCCC-CccccccccCCCCCeecC-----CCCCCcc
Q psy833 11 HCPAGTFAGINQKTCTPCPRGFYQNN---DRQGVCLKCPMG-TYTREEG-SKAVQECVPVCGYGTYSP-----TGLVPCL 80 (642)
Q Consensus 11 ~C~~G~~~~~~~~~C~~Cp~G~y~~~---~~~~~C~~Cp~g-~~~~~~g-s~~~~~C~~~C~~G~y~~-----~g~~~C~ 80 (642)
.|+.|+|.. +..-|..||+|+|... .....|.+|++| +|+...+ ...|..|. .|.+|.+.. .....|.
T Consensus 3 ~C~~g~y~~-~~~~C~~CppG~~~~~~C~~~~t~C~~C~~g~ty~~~~~~~~~C~~C~-~C~~~~~~~~~Ct~t~d~~C~ 80 (161)
T 1sg1_X 3 TCSTGLYTH-SGECCKACNLGEGVAQPCGANQTVCEPCLDNVTFSDVVSATEPCKPCT-ECLGLQSMSAPCVEADDAVCR 80 (161)
T ss_dssp CCTTCCBCT-TSCBCCCBCTTEEEEECSSSSSCEEEECCTTTEECCSCBSSCCCEECC-CCCTTEEEEECCBTTBCCEEE
T ss_pred CCCcccCcc-CCcCCCCCCcCCeECCcCCCCCCcCcCCcCCCccccCCCCCCcCcCCC-CCCCcceeecCCCcccCceec
Confidence 588999885 3567888999999864 256789999988 8887654 34566776 688887763 2345685
Q ss_pred cCCCCcccCCCCCCCCCCCCCCCCceeec
Q psy833 81 ECPRNSYTGEPPVGGHKDCEACPANMFTY 109 (642)
Q Consensus 81 ~C~~G~y~~~~p~~g~~~C~~Cp~G~~~~ 109 (642)
|+.|+|.+.. ...-..|..|+.|++..
T Consensus 81 -C~~G~y~~~~-~~~C~~C~~C~~G~~v~ 107 (161)
T 1sg1_X 81 -CAYGYYQDEE-TGHCEACSVCEVGSGLV 107 (161)
T ss_dssp -ECTTEEECTT-TCCEEECCCBCTTEEEE
T ss_pred -cCCCeEeCCC-CccccCCccCCCCCeec
Confidence 9999988531 01112357788888653
No 86
>3urf_Z Tumor necrosis factor receptor superfamily member; cystein-rich domain, beta-sandwich, cytokine; HET: NAG; 2.70A {Homo sapiens} PDB: 4e4d_R
Probab=97.91 E-value=3.9e-06 Score=78.26 Aligned_cols=103 Identities=23% Similarity=0.556 Sum_probs=68.8
Q ss_pred CCCccCCCCeeecC-----CCCCcccCCCCceecCC-CCCCceeCC----CCceecC-CCCccccccccCCCCCeecCCC
Q psy833 7 PRCLHCPAGTFAGI-----NQKTCTPCPRGFYQNND-RQGVCLKCP----MGTYTRE-EGSKAVQECVPVCGYGTYSPTG 75 (642)
Q Consensus 7 ~~C~~C~~G~~~~~-----~~~~C~~Cp~G~y~~~~-~~~~C~~Cp----~g~~~~~-~gs~~~~~C~~~C~~G~y~~~g 75 (642)
.-|..||+|+|... ....|.+||.|+|.+.. +...|++|. .+.+... --+++-.+|. |++|||....
T Consensus 18 ~cC~~CppG~~~~~~Ct~~~~t~C~~C~~gty~~~~n~~~~C~~C~~~C~~~~~~~~~CT~tsdtvC~--C~~G~~~~~~ 95 (171)
T 3urf_Z 18 LLCDKCPPGTYLKQHCTAKWKTVCAPCPDHYYTDSWHTSDECLYCSPVCKELQYVKQECNRTHNRVCE--CKEGRYLEIE 95 (171)
T ss_dssp CEEECBCTTEEEEECCCSSSCCEEEECCTTEECCSCBCCSSCEECCCCCCTTEEEEECCCSSSCCEEE--ECTTEEEETT
T ss_pred CCCCCCCCCceecccCCCCCCCccccCCCCcEecCCCCCCccccCcCccCCCCEEeccCcCCCCcccc--CCCCcEECCc
Confidence 45779999999643 34689999999999874 356787765 3543322 2233345675 9999998642
Q ss_pred -CCCcccCCCCcccCCCC-CCCCCCCCCCCCceeeccC
Q psy833 76 -LVPCLECPRNSYTGEPP-VGGHKDCEACPANMFTYQP 111 (642)
Q Consensus 76 -~~~C~~C~~G~y~~~~p-~~g~~~C~~Cp~G~~~~~~ 111 (642)
-..|..|+.|++..... ......|.+|+.|+|....
T Consensus 96 ~C~~ct~C~~G~~v~~~~t~~~dt~C~~C~~Gtfs~~~ 133 (171)
T 3urf_Z 96 FCLKHRSCPPGFGVVQAGTPERNTVCKRCPDGFFSNET 133 (171)
T ss_dssp EEEECCCBCTTEEEEECCCSSSCCEEEECCTTEECSSC
T ss_pred cCcccCcCCCCceEeecCccCCCcccccCCCCcccCCC
Confidence 12356778887654432 2345679999999887654
No 87
>2uwi_A CRME protein; receptor, poxvirus TNF receptor, receptor immunomodulator, TNF alpha receptor; 2.0A {Vaccinia virus}
Probab=97.84 E-value=4.1e-06 Score=75.79 Aligned_cols=100 Identities=19% Similarity=0.435 Sum_probs=58.8
Q ss_pred CCccCCCCeeecC-----CCCCcccCCCCceecCCCC-CCceeCCCC----cee-cCCCCccccccccCCCCCeecCC--
Q psy833 8 RCLHCPAGTFAGI-----NQKTCTPCPRGFYQNNDRQ-GVCLKCPMG----TYT-REEGSKAVQECVPVCGYGTYSPT-- 74 (642)
Q Consensus 8 ~C~~C~~G~~~~~-----~~~~C~~Cp~G~y~~~~~~-~~C~~Cp~g----~~~-~~~gs~~~~~C~~~C~~G~y~~~-- 74 (642)
-|..||+|+|... ....|.+||.|+|++.... ..|++|... ... ..--+++-..| .|.+|||...
T Consensus 16 cC~~CppG~~~~~~C~~~~~t~C~pC~~gty~~~~n~~~~C~~C~~C~~~~~~~~~~Ct~t~dtvC--~C~~G~yc~~~~ 93 (142)
T 2uwi_A 16 CCKLCKPGTYSDHRCDKYSDTICGHCPSDTFTSIYNRSPWCHSCRGPCGTNRVEVTPCTPTTNRIC--HCDSNSYCLLKA 93 (142)
T ss_dssp EEECBCTTEEEEECCCSSCCCEEEECCTTEECCSSBCCSSCEECCCCCCTTEEEEECCBTTBCCEE--EECTTEEEEEEC
T ss_pred CCCCCCCCCeeCccCCCCCCCccCcCCCCCCcccCCCCCccCCCcCcccCCeeEeecCCCCCCCEe--eCCCCcEecccC
Confidence 4789999999652 3567999999999986443 468887643 221 11122333466 4999999642
Q ss_pred CC---CCc---ccCCCCcccCCCCCCCCCCCCCCCCceeec
Q psy833 75 GL---VPC---LECPRNSYTGEPPVGGHKDCEACPANMFTY 109 (642)
Q Consensus 75 g~---~~C---~~C~~G~y~~~~p~~g~~~C~~Cp~G~~~~ 109 (642)
.. ..| ..|+.|.+...........|.+|+.|+|+.
T Consensus 94 ~~~~C~~C~~~t~C~pG~~v~~~t~~~dt~C~~C~~GtfS~ 134 (142)
T 2uwi_A 94 SDGNCVTCAPKTKCGRGYGKKGEDEMGNTICKKCRKGTYSK 134 (142)
T ss_dssp TTSCEEEEEECCCCCTTEEEEEECTTSCEEEEECC------
T ss_pred CCCCCCCCcCCCcCCcCEeeCCCCCCCCCcccCCCCCcccC
Confidence 11 345 577888774221123567788888887743
No 88
>1du3_A Death receptor 5; trail, DR5, complex; 2.20A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1d0g_R 2h9g_R 1za3_R 1d4v_A
Probab=97.84 E-value=1.1e-05 Score=71.76 Aligned_cols=27 Identities=26% Similarity=0.594 Sum_probs=12.6
Q ss_pred CccCCCCeeecCCCCCcccCCCC-ceec
Q psy833 9 CLHCPAGTFAGINQKTCTPCPRG-FYQN 35 (642)
Q Consensus 9 C~~C~~G~~~~~~~~~C~~Cp~G-~y~~ 35 (642)
|..||+|+|.......|.+|+.| +|.+
T Consensus 25 C~~CppG~~~~~~~t~C~pC~~g~ty~~ 52 (130)
T 1du3_A 25 EGLCPPGHHISEDGRDCISCKYGQDYST 52 (130)
T ss_dssp TTBBCTTEEECSSSSCEEECCTTTEECC
T ss_pred cCCCCCCceecCCCCcCccCCCcCEEeC
Confidence 44455555544333444444444 4443
No 89
>3k51_B Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, cytokine, D bond, glycoprotein, membrane, secreted, signal-anchor, transmembrane, apoptosis; 2.45A {Homo sapiens} PDB: 3mi8_D 3mhd_D
Probab=97.79 E-value=9.2e-06 Score=76.17 Aligned_cols=102 Identities=25% Similarity=0.556 Sum_probs=66.1
Q ss_pred CCccCCCCeeecC-----CCCCcccCCCCceecCC-CCCCceeCC----CCceecC-CCCccccccccCCCCCeecCCC-
Q psy833 8 RCLHCPAGTFAGI-----NQKTCTPCPRGFYQNND-RQGVCLKCP----MGTYTRE-EGSKAVQECVPVCGYGTYSPTG- 75 (642)
Q Consensus 8 ~C~~C~~G~~~~~-----~~~~C~~Cp~G~y~~~~-~~~~C~~Cp----~g~~~~~-~gs~~~~~C~~~C~~G~y~~~g- 75 (642)
-|..||+|+|... ....|.+|+.|+|++.. ....|++|. .|..... --+++-.+| .|.+|||....
T Consensus 21 cC~~CppG~~~~~~Ct~~~~t~C~pC~~gtY~~~~n~~~~C~~C~~~C~~~~~~~~~Ct~tsdtvC--~C~~G~~~~~~~ 98 (176)
T 3k51_B 21 VCAQCPPGTFVQRPCRRDSPTTCGPCPPRHYTQFWNYLERCRYCNVLCGEREEEARACHATHNRAC--RCRTGFFAHAGF 98 (176)
T ss_dssp EEECBCTTEEEEECCCSSSCCEEEECCTTEECCSCBCCSSCEECCCCCCSSEEEEECCBTTBCCEE--EECTTEEEETTE
T ss_pred CCCCCCCCceeCccCCCCCCCccccCCCCCeecCCCCCCcCccccCcCCCCCEEeccCcCCCCcee--eccCCeeECCCc
Confidence 4779999999642 24689999999999764 446788775 3333221 122333456 49999998743
Q ss_pred CCCcccCCCCcccCCCC-CCCCCCCCCCCCceeeccC
Q psy833 76 LVPCLECPRNSYTGEPP-VGGHKDCEACPANMFTYQP 111 (642)
Q Consensus 76 ~~~C~~C~~G~y~~~~p-~~g~~~C~~Cp~G~~~~~~ 111 (642)
-..|..|+.|++..... ......|.+|+.|+|....
T Consensus 99 C~~~s~C~pG~~v~~~~t~~~Dt~C~~C~~GtFs~~~ 135 (176)
T 3k51_B 99 CLEHASCPPGAGVIAPGTPSQNTQCQPCPPGTFSASS 135 (176)
T ss_dssp EEECCCCCTTEEEEECCCSSSCCEEEECCTTEECCSC
T ss_pred ccccccCCCCcEEeecCcccCCCccccCCCCcccCCC
Confidence 12345788887654322 2345679999999886554
No 90
>3qd6_R CD40L receptor, tumor necrosis factor receptor superfamily member; immune regulator, cytokine-cytokine receptor compl; HET: NAG; 3.50A {Homo sapiens}
Probab=97.74 E-value=3.6e-05 Score=72.42 Aligned_cols=100 Identities=20% Similarity=0.406 Sum_probs=39.0
Q ss_pred CccCCCCeeecC-----CCCCcccCCCCceecCC-CCCCceeCC---C--Ccee-cCCCCccccccccCCCCCeecCC-C
Q psy833 9 CLHCPAGTFAGI-----NQKTCTPCPRGFYQNND-RQGVCLKCP---M--GTYT-REEGSKAVQECVPVCGYGTYSPT-G 75 (642)
Q Consensus 9 C~~C~~G~~~~~-----~~~~C~~Cp~G~y~~~~-~~~~C~~Cp---~--g~~~-~~~gs~~~~~C~~~C~~G~y~~~-g 75 (642)
|..||+|+|... ....|.+|+.|+|++.. +...|++|. . |... ..--+++-..|. |++|||... .
T Consensus 18 C~~CppG~~~~~~C~~~~~t~C~pC~~gty~~~~n~~~~C~~C~~C~~~~g~~~~~~Ct~t~d~~C~--C~~G~~~~~~~ 95 (177)
T 3qd6_R 18 CSLCQPGQKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICT--CEEGWHCTSEA 95 (177)
T ss_dssp ECCBCTTBCCCBCCCSSCCCBCCBCCSSEECCSSBCCSSCEECCCCCGGGTEEEEECCCTTSCCEEE--ECTTEEESSSS
T ss_pred CCCCCCCCEeccCCCCCCCCccccCCCCceecCCCCCCcCCCCCcCCCcCCeEEecCCcCCCCceee--cCCCcEECCCC
Confidence 556666666432 23456666666666542 233454442 2 2211 111222233454 777777643 2
Q ss_pred CCCc---ccCCCCcccCCCC-CCCCCCCCCCCCceeecc
Q psy833 76 LVPC---LECPRNSYTGEPP-VGGHKDCEACPANMFTYQ 110 (642)
Q Consensus 76 ~~~C---~~C~~G~y~~~~p-~~g~~~C~~Cp~G~~~~~ 110 (642)
-..| ..|+.|++..... ......|.+|+.|+|...
T Consensus 96 c~~C~~~~~C~pG~~v~~~~t~~~dt~C~~C~~Gtfs~~ 134 (177)
T 3qd6_R 96 CESCVLHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNV 134 (177)
T ss_dssp CCCEEECCCC------CCCCCSSCCCCCCC---------
T ss_pred CccccccCcCCCCcEEEeCCccCCCCccccCCCCcccCC
Confidence 2334 3456665443322 123456666777766443
No 91
>3me4_A Tumor necrosis factor receptor superfamily member; RANK, rankl, rankl-RANK complex, tnfsf11, tnfrsf11A, TNF SUP signaling protein; 2.01A {Mus musculus} PDB: 3me2_R 3qbq_B 4giq_R* 3nzy_B
Probab=97.67 E-value=3.7e-05 Score=74.41 Aligned_cols=26 Identities=15% Similarity=0.261 Sum_probs=16.7
Q ss_pred CCCCCeecCC-----CCCCcccCCCCcccCC
Q psy833 65 VCGYGTYSPT-----GLVPCLECPRNSYTGE 90 (642)
Q Consensus 65 ~C~~G~y~~~-----g~~~C~~C~~G~y~~~ 90 (642)
.|++|++... ....|.+|+.|+|.+.
T Consensus 131 ~C~pG~~v~~~ct~~~Dt~C~~C~~GtFs~~ 161 (216)
T 3me4_A 131 ECAPGFGAQHPLQLNKDTVCTPCLLGFFSDV 161 (216)
T ss_dssp CBCTTEEECSSEETTSCCCEEECCTTEECCS
T ss_pred cCCCCccccccCccCCCCccccCCCceecCC
Confidence 6777776432 3346777777777754
No 92
>2psm_F Interleukin-15 receptor alpha chain; cytokine, glycoprotein, secreted, alternative splicing, endoplasmic reticulum, golgi apparatus, membrane; 2.19A {Mus musculus} SCOP: g.18.1.1
Probab=97.61 E-value=6.4e-05 Score=59.11 Aligned_cols=60 Identities=23% Similarity=0.465 Sum_probs=46.4
Q ss_pred CCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCcc-ccCCccCCCceEEeccCC-----eecCC
Q psy833 178 GPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFK-LAGQTDKNDNVVRCQANG-----IWDFG 251 (642)
Q Consensus 178 ~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~-l~G~~~~~~~~~~C~~~G-----~Ws~~ 251 (642)
.+.|++|+..+|.. +. ...|.++++++|.|++||+ +.|.+ ..++|..+| .|+.+
T Consensus 8 ~~~C~~Pp~ve~a~-~r---------------~~~y~v~s~vRYqC~~Gf~rr~g~s----~lirC~~n~~~~~~~Wt~P 67 (78)
T 2psm_F 8 GTTCPPPVSIEHAD-IR---------------VKNYSVNSRERYVCNSGFKRKAGTS----TLIECVINKNTNVAHWTTP 67 (78)
T ss_dssp --CCCCCCCCTTEE-CC---------------CSCCSTTCEEECEECTTEEECTTCC----CEEEEEEETTTTEEEECCC
T ss_pred CCcCCCCCcccccc-cc---------------eeeeccCCEEEEecchhHHhhCCCC----CceEEEcCCCcCcceecCC
Confidence 45799999999987 21 1458999999999999995 44554 369999876 69988
Q ss_pred CCceec
Q psy833 252 DLRCEG 257 (642)
Q Consensus 252 ~P~C~~ 257 (642)
...|..
T Consensus 68 ~L~CI~ 73 (78)
T 2psm_F 68 SLKCIR 73 (78)
T ss_dssp CCCEEE
T ss_pred CeEEec
Confidence 888874
No 93
>1du3_A Death receptor 5; trail, DR5, complex; 2.20A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1d0g_R 2h9g_R 1za3_R 1d4v_A
Probab=97.58 E-value=3.1e-05 Score=68.85 Aligned_cols=90 Identities=21% Similarity=0.447 Sum_probs=55.2
Q ss_pred CCeeecCCCCCcccCCCCceecCCCCCCceeCCCC-ceecCC-CCccccccccCCCCCeecC-----CCCCCcccCCCCc
Q psy833 14 AGTFAGINQKTCTPCPRGFYQNNDRQGVCLKCPMG-TYTREE-GSKAVQECVPVCGYGTYSP-----TGLVPCLECPRNS 86 (642)
Q Consensus 14 ~G~~~~~~~~~C~~Cp~G~y~~~~~~~~C~~Cp~g-~~~~~~-gs~~~~~C~~~C~~G~y~~-----~g~~~C~~C~~G~ 86 (642)
+|.|.-.....|..||+|+|... ....|.+|++| +|+... +...|..|. .|++|++.. .....|. |+.|+
T Consensus 14 ~~~~~~~~~~~C~~CppG~~~~~-~~t~C~pC~~g~ty~~~~n~~~~C~~C~-~C~~g~~~~~~Ct~t~dtvC~-C~~G~ 90 (130)
T 1du3_A 14 AAPQQKRSSPSEGLCPPGHHISE-DGRDCISCKYGQDYSTHWNDLLFCLRCT-RCDSGEVELSPCTTTRNTVCQ-CEEGT 90 (130)
T ss_dssp -------CCCBTTBBCTTEEECS-SSSCEEECCTTTEECCSSBCCSSCEECC-CCCTTEEEEECCCSSSCCEEE-ECTTC
T ss_pred CcceecCCCCccCCCCCCceecC-CCCcCccCCCcCEEeCCCCCCCcCcCCC-CCCcceeeeccCCCCCCCEec-CCCCe
Confidence 45555445667899999999998 46889999999 898754 334466777 699998843 3456788 99999
Q ss_pred ccCCCCCCCCCCCC----CCCCceeec
Q psy833 87 YTGEPPVGGHKDCE----ACPANMFTY 109 (642)
Q Consensus 87 y~~~~p~~g~~~C~----~Cp~G~~~~ 109 (642)
|.... ....|. .|+.|+...
T Consensus 91 y~~~~---~~~~C~~C~t~C~~G~~~~ 114 (130)
T 1du3_A 91 FREED---SPEMCRKCRTGCPRGMVKV 114 (130)
T ss_dssp EEETT---EEEEEEC------------
T ss_pred EECCC---CCCcCcCCcCcCCcCCEEe
Confidence 98642 233454 366776543
No 94
>3u3p_A Tumor necrosis factor receptor superfamily member; trigger apoptosis, apoptosis; 2.09A {Homo sapiens} PDB: 3u3q_A 3u3s_A 3u3t_A 3u3v_A 3qo4_A
Probab=97.50 E-value=0.00011 Score=74.23 Aligned_cols=75 Identities=31% Similarity=0.733 Sum_probs=50.4
Q ss_pred CCCeeecCC-----CCCcccCCCCceecC----CCCCCceeCCCCceecCC-CCccccccccCCCCCeecCC-----CCC
Q psy833 13 PAGTFAGIN-----QKTCTPCPRGFYQNN----DRQGVCLKCPMGTYTREE-GSKAVQECVPVCGYGTYSPT-----GLV 77 (642)
Q Consensus 13 ~~G~~~~~~-----~~~C~~Cp~G~y~~~----~~~~~C~~Cp~g~~~~~~-gs~~~~~C~~~C~~G~y~~~-----g~~ 77 (642)
.+|+|.... ..-|..||+|+|... .....|.+|+.|+|+... +...|..|...|..|++... ...
T Consensus 9 ~pgtY~h~d~~t~~~~CC~~CpPGtyv~~~Ct~~~dt~C~pCp~GtYt~~~N~~~~C~~C~~~C~~g~~~~~~CT~TsDt 88 (313)
T 3u3p_A 9 LIGTYRHVDRATGQVLTCDKCPAGTYVSEHCTNTSLRVCSSCPVGTFTRHENGIEKCHDCSQPCPWPMIEKLPCAALTDR 88 (313)
T ss_dssp -CCEEEEECTTTCCEEEEECBCTTEEEEECCBTTBCCEEEECCTTEECCSCBCCSSCEECCCCCCTTCEEEECSBTTBCC
T ss_pred CCCccccCCCCCCCCCCCCCCCCCceecCcCCCCCCCccccCCCCceeccCCCCCcCcccccccCCCCEEecCCcCCCCc
Confidence 478886532 235789999999753 246789999999999764 55677777755888877431 223
Q ss_pred CcccCCCCccc
Q psy833 78 PCLECPRNSYT 88 (642)
Q Consensus 78 ~C~~C~~G~y~ 88 (642)
.| .|..|+|.
T Consensus 89 vC-~C~~G~y~ 98 (313)
T 3u3p_A 89 EC-TCPPGMFQ 98 (313)
T ss_dssp EE-ECCTTEEE
T ss_pred cc-cCCCCcee
Confidence 35 46666554
No 95
>3qd6_R CD40L receptor, tumor necrosis factor receptor superfamily member; immune regulator, cytokine-cytokine receptor compl; HET: NAG; 3.50A {Homo sapiens}
Probab=97.41 E-value=0.00012 Score=68.90 Aligned_cols=95 Identities=14% Similarity=0.261 Sum_probs=61.4
Q ss_pred ccCCCCeeecCCCCCcccCCCCceecC----CCCCCceeCCCCceecCC-CCccccccccCCCCC--eec-----CCCCC
Q psy833 10 LHCPAGTFAGINQKTCTPCPRGFYQNN----DRQGVCLKCPMGTYTREE-GSKAVQECVPVCGYG--TYS-----PTGLV 77 (642)
Q Consensus 10 ~~C~~G~~~~~~~~~C~~Cp~G~y~~~----~~~~~C~~Cp~g~~~~~~-gs~~~~~C~~~C~~G--~y~-----~~g~~ 77 (642)
..|+.|.|... +.-|..||+|+|... .....|.+|++|+|+... +...|..|. .|.++ .+. .....
T Consensus 4 ~~C~~~~Y~~~-~~CC~~CppG~~~~~~C~~~~~t~C~pC~~gty~~~~n~~~~C~~C~-~C~~~~g~~~~~~Ct~t~d~ 81 (177)
T 3qd6_R 4 TACREKQYLIN-SQCCSLCQPGQKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQHK-YCDPNLGLRVQQKGTSETDT 81 (177)
T ss_dssp --CCSSCEECS-SSEECCBCTTBCCCBCCCSSCCCBCCBCCSSEECCSSBCCSSCEECC-CCCGGGTEEEEECCCTTSCC
T ss_pred ccCCCCcEECC-CeECCCCCCCCEeccCCCCCCCCccccCCCCceecCCCCCCcCCCCC-cCCCcCCeEEecCCcCCCCc
Confidence 46899999873 455789999999753 245789999999998764 334566666 68864 432 12456
Q ss_pred CcccCCCCcccCCCCCCCCCCC---CCCCCceeecc
Q psy833 78 PCLECPRNSYTGEPPVGGHKDC---EACPANMFTYQ 110 (642)
Q Consensus 78 ~C~~C~~G~y~~~~p~~g~~~C---~~Cp~G~~~~~ 110 (642)
.|. |..|+|... ..-..| ..|+.|+....
T Consensus 82 ~C~-C~~G~~~~~---~~c~~C~~~~~C~pG~~v~~ 113 (177)
T 3qd6_R 82 ICT-CEEGWHCTS---EACESCVLHRSCSPGFGVKQ 113 (177)
T ss_dssp EEE-ECTTEEESS---SSCCCEEECCCC------CC
T ss_pred eee-cCCCcEECC---CCCccccccCcCCCCcEEEe
Confidence 788 999999764 356667 57898875543
No 96
>1ext_A Tumor necrosis factor receptor; binding protein, cytokine, signalling protein; 1.85A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1ft4_A* 1ncf_A 1tnr_R
Probab=97.12 E-value=0.00059 Score=63.04 Aligned_cols=121 Identities=22% Similarity=0.436 Sum_probs=62.7
Q ss_pred cCCCCceecC-CCCCCceeCCCCceecCCC--CccccccccCCCCCeecCC--CCCCcccCC---C--CcccCC-CCCCC
Q psy833 27 PCPRGFYQNN-DRQGVCLKCPMGTYTREEG--SKAVQECVPVCGYGTYSPT--GLVPCLECP---R--NSYTGE-PPVGG 95 (642)
Q Consensus 27 ~Cp~G~y~~~-~~~~~C~~Cp~g~~~~~~g--s~~~~~C~~~C~~G~y~~~--g~~~C~~C~---~--G~y~~~-~p~~g 95 (642)
.|+.|+|... .+..-|..||+|++..... ...-+.|. .|++|+|.+. ....|.+|. . |.+... -....
T Consensus 4 ~C~~g~Y~~~~~~~~CC~~CppG~~~~~~Ct~~~~~t~C~-~C~~gty~~~~n~~~~C~~C~~C~~~~~~~~~~~Ct~t~ 82 (162)
T 1ext_A 4 VCPQGKYIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCR-ECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDR 82 (162)
T ss_dssp CCCTTEEECSSCTTCEEECBCTTEEEEECCSSTTSCCEEE-ECCTTEECCSSBCCSSCEECCCCCGGGTCEEEECCBTTB
T ss_pred cCCCCceeccCCCCCCCCCCCCCcccccccCCCCCCcccc-cCCCCccccccCCCCcccccCCCCCCCCEEEEecccCCC
Confidence 6788888862 2444578888888876542 23345666 5888888765 334465554 3 322211 01234
Q ss_pred CCCCCCCCCceeeccCC--CCCCCCCCCCCCCCCcccee--cCCCCeeeEEeCCCCeeccCCc
Q psy833 96 HKDCEACPANMFTYQPA--APARNFCRVPTPGAEYGNFL--DTRYQSSFFFGCQDTFKLAGQT 154 (642)
Q Consensus 96 ~~~C~~Cp~G~~~~~~~--~~s~~~C~~~~~~p~nG~~~--~~~~~~~~~~~C~~Gy~l~g~~ 154 (642)
...| .|+.|+|....+ ......|.. -..|.+. ++....... .|.+||+..+..
T Consensus 83 dt~C-~C~~G~y~~~~~~~~~~C~~C~~----C~~G~v~~~ct~~~dtvC-~C~~G~ys~~~~ 139 (162)
T 1ext_A 83 DTVC-GCRKNQYRHYWSENLFQCFNCSL----CLNGTVHLSCQEKQNTVC-TCHAGFFLRENE 139 (162)
T ss_dssp CCEE-ECCTTEEEEEEETTEEEEEECCC----CTTEEEEECCBTTBCCEE-EECTTEEEETTE
T ss_pred CCCc-cCCCCceeccCCCCcccccCCCc----CCCCEEeccccCCCCccc-cCCCCeecCCCc
Confidence 4567 488887764221 111222221 1124322 222222223 399998877644
No 97
>3tje_F Tumor necrosis factor receptor superfamily member; agonistic antibody, FAB fragment, antibody-receptor complex, cysteine-rich domain, FAS, immune; HET: EDO; 1.93A {Homo sapiens} PDB: 3thm_F*
Probab=96.98 E-value=0.0011 Score=60.66 Aligned_cols=77 Identities=26% Similarity=0.499 Sum_probs=44.3
Q ss_pred cCCCCeeecCCCCCcccCCCCceecCC----C-CCCceeCCCC-ceecCC-CCccccccccCCCCCe--ec-----CCCC
Q psy833 11 HCPAGTFAGINQKTCTPCPRGFYQNND----R-QGVCLKCPMG-TYTREE-GSKAVQECVPVCGYGT--YS-----PTGL 76 (642)
Q Consensus 11 ~C~~G~~~~~~~~~C~~Cp~G~y~~~~----~-~~~C~~Cp~g-~~~~~~-gs~~~~~C~~~C~~G~--y~-----~~g~ 76 (642)
.|+.|+|.. ++.-|..||+|+|.... + ...|.+|++| +|+... +...|..|. .|..+. .. ....
T Consensus 31 ~C~~~~Y~~-~~~CC~~CppG~~v~~~Ct~~~~~t~C~pC~~g~ty~~~~n~~~~C~~C~-~C~~~~g~~~~~~CT~t~d 108 (156)
T 3tje_F 31 QNLEGLHHD-GQFCHKPCPPGERKARDCTVNGDEPDCVPCQEGKEYTDKAHFSSKCRRCR-LCDEGHGLEVEINCTRTQN 108 (156)
T ss_dssp --------C-CTTCSSCBCTTEEESSCCCSSSCCCCEEECCTTTEECSSCBSCSCCEECC-CCCGGGTEEEEECCBTTBC
T ss_pred CCCCCcEEC-cCeECCCCCCCCeECCcCCCCCCCCcceeCCCCCeeeccCCCCCcCcCCC-CCCCCcceEEeccccCCCC
Confidence 688998875 34556789999997531 2 5789999999 788764 335566777 588762 21 1123
Q ss_pred CCcccCCCCcccCC
Q psy833 77 VPCLECPRNSYTGE 90 (642)
Q Consensus 77 ~~C~~C~~G~y~~~ 90 (642)
..| .|..|+|...
T Consensus 109 tvC-~C~~G~fc~~ 121 (156)
T 3tje_F 109 TKC-RCKPNFFCNS 121 (156)
T ss_dssp CEE-EECTTEECCS
T ss_pred Cee-eCCCCCEeCC
Confidence 446 5777777643
No 98
>2z3q_B Interleukin-15 receptor alpha chain; protein-protein complex, cytokine/cytokine receptor complex; 1.85A {Homo sapiens} SCOP: g.18.1.1 PDB: 2z3r_B 2ers_A
Probab=96.95 E-value=0.00085 Score=55.28 Aligned_cols=59 Identities=22% Similarity=0.355 Sum_probs=46.8
Q ss_pred CCcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCcc-ccCCccCCCceEEeccC-----CeecCC
Q psy833 178 GPVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFK-LAGQTDKNDNVVRCQAN-----GIWDFG 251 (642)
Q Consensus 178 ~~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~-l~G~~~~~~~~~~C~~~-----G~Ws~~ 251 (642)
.+.|+.|+..+|..+ . ...|.+|++++|.|++||+ +.|.+ +.++|..+ ..|+.+
T Consensus 5 ~~~C~~Pp~~EHad~-r---------------v~~y~v~s~vRYqC~~Gykrkagts----ali~Ck~~~~~g~~~WT~P 64 (107)
T 2z3q_B 5 SITCPPPMSVEHADI-W---------------VKSYSLYSRERYICNSGFKRKAGTS----SLTECVLNKATNVAHWTTP 64 (107)
T ss_dssp CCBCCCCCCCTTEEC-C---------------CSCCBTTCEEECEECTTEEECTTCC----CEEEEEEETTTTEEEECCC
T ss_pred CccCCCCCCcccccc-e---------------eEEeccCCEEEEecchhhhhhcCCC----CccEEEecccCCcceecCC
Confidence 357999998888872 1 1458999999999999995 56665 46999855 579998
Q ss_pred CCcee
Q psy833 252 DLRCE 256 (642)
Q Consensus 252 ~P~C~ 256 (642)
...|+
T Consensus 65 ~LkCI 69 (107)
T 2z3q_B 65 SLKCI 69 (107)
T ss_dssp CCCEE
T ss_pred CeEEe
Confidence 88998
No 99
>2uwi_A CRME protein; receptor, poxvirus TNF receptor, receptor immunomodulator, TNF alpha receptor; 2.0A {Vaccinia virus}
Probab=96.85 E-value=0.00067 Score=61.15 Aligned_cols=75 Identities=27% Similarity=0.516 Sum_probs=47.2
Q ss_pred CCCC-eeec-CCCCCcccCCCCceecC----CCCCCceeCCCCceecCCCC-ccccccccCCCC-Ceec-----CCCCCC
Q psy833 12 CPAG-TFAG-INQKTCTPCPRGFYQNN----DRQGVCLKCPMGTYTREEGS-KAVQECVPVCGY-GTYS-----PTGLVP 78 (642)
Q Consensus 12 C~~G-~~~~-~~~~~C~~Cp~G~y~~~----~~~~~C~~Cp~g~~~~~~gs-~~~~~C~~~C~~-G~y~-----~~g~~~ 78 (642)
|..+ .|.. .+..-|..||+|+|... .....|.+||+|+|+..... ..|..|. .|.. +... ......
T Consensus 2 C~~~~eyy~~~~~~cC~~CppG~~~~~~C~~~~~t~C~pC~~gty~~~~n~~~~C~~C~-~C~~~~~~~~~~Ct~t~dtv 80 (142)
T 2uwi_A 2 CEQGVSYYNSQELKCCKLCKPGTYSDHRCDKYSDTICGHCPSDTFTSIYNRSPWCHSCR-GPCGTNRVEVTPCTPTTNRI 80 (142)
T ss_dssp CCTTTEEEETTTTEEEECBCTTEEEEECCCSSCCCEEEECCTTEECCSSBCCSSCEECC-CCCCTTEEEEECCBTTBCCE
T ss_pred CCCCCeeeccCCCCCCCCCCCCCeeCccCCCCCCCccCcCCCCCCcccCCCCCccCCCc-CcccCCeeEeecCCCCCCCE
Confidence 5556 5554 34457889999999763 35678999999999976433 3455565 3544 3431 112345
Q ss_pred cccCCCCccc
Q psy833 79 CLECPRNSYT 88 (642)
Q Consensus 79 C~~C~~G~y~ 88 (642)
|. |..|+|.
T Consensus 81 C~-C~~G~yc 89 (142)
T 2uwi_A 81 CH-CDSNSYC 89 (142)
T ss_dssp EE-ECTTEEE
T ss_pred ee-CCCCcEe
Confidence 63 7777774
No 100
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=96.63 E-value=0.0024 Score=66.21 Aligned_cols=69 Identities=22% Similarity=0.439 Sum_probs=51.9
Q ss_pred CcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCc-cccCCccCCCceEEeccCCeecC-----CC
Q psy833 179 PVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTF-KLAGQTDKNDNVVRCQANGIWDF-----GD 252 (642)
Q Consensus 179 ~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy-~l~G~~~~~~~~~~C~~~G~Ws~-----~~ 252 (642)
+.|+.|+.+.||.+... ..+.|+++++|+|++|| +|.+... ...+|.++|.|.. ..
T Consensus 2 v~C~~p~~~~~g~~~~~---------------~~~~~~s~~~~~C~~~yy~~~~~~~---~~~~C~~~g~w~~~~~~~~~ 63 (333)
T 1elv_A 2 LDCGIPESIENGKVEDP---------------ESTLFGSVIRYTCEEPYYYMENGGG---GEYHCAGNGSWVNEVLGPEL 63 (333)
T ss_dssp CBCCSCCCCTTEEECCC---------------SCCBTTCEEEEEECTTTEEEC--CC---SEEEECTTSCEEBTTTBTSC
T ss_pred CCCCCCCcccCCceecC---------------CCCccceeEEEECCCCeEeeecCCC---ceEEECCCCeEccccccccc
Confidence 57999999999983211 34789999999999995 6666521 2489999999987 78
Q ss_pred CceecCcCCCCCCC
Q psy833 253 LRCEGPVCSDPGRP 266 (642)
Q Consensus 253 P~C~~~~C~~p~~~ 266 (642)
|.|.+ .|+.+..+
T Consensus 64 ~~c~~-~CG~~~~~ 76 (333)
T 1elv_A 64 PKCVP-VCGVPREP 76 (333)
T ss_dssp CCEEE-CCSCCSSC
T ss_pred ccccC-CcCCCCCc
Confidence 89997 69876543
No 101
>3tje_F Tumor necrosis factor receptor superfamily member; agonistic antibody, FAB fragment, antibody-receptor complex, cysteine-rich domain, FAS, immune; HET: EDO; 1.93A {Homo sapiens} PDB: 3thm_F*
Probab=96.62 E-value=0.0011 Score=60.58 Aligned_cols=64 Identities=20% Similarity=0.516 Sum_probs=43.2
Q ss_pred CccCCCCeeecC-----C-CCCcccCCCC-ceecCCC-CCCceeCC---CCc--e-ecCCCCccccccccCCCCCeecCC
Q psy833 9 CLHCPAGTFAGI-----N-QKTCTPCPRG-FYQNNDR-QGVCLKCP---MGT--Y-TREEGSKAVQECVPVCGYGTYSPT 74 (642)
Q Consensus 9 C~~C~~G~~~~~-----~-~~~C~~Cp~G-~y~~~~~-~~~C~~Cp---~g~--~-~~~~gs~~~~~C~~~C~~G~y~~~ 74 (642)
|..||+|+|... . ...|.+|+.| +|.+... ...|++|. .+. . ...--++.-..| .|.+|||...
T Consensus 44 C~~CppG~~v~~~Ct~~~~~t~C~pC~~g~ty~~~~n~~~~C~~C~~C~~~~g~~~~~~CT~t~dtvC--~C~~G~fc~~ 121 (156)
T 3tje_F 44 HKPCPPGERKARDCTVNGDEPDCVPCQEGKEYTDKAHFSSKCRRCRLCDEGHGLEVEINCTRTQNTKC--RCKPNFFCNS 121 (156)
T ss_dssp SSCBCTTEEESSCCCSSSCCCCEEECCTTTEECSSCBSCSCCEECCCCCGGGTEEEEECCBTTBCCEE--EECTTEECCS
T ss_pred CCCCCCCCeECCcCCCCCCCCcceeCCCCCeeeccCCCCCcCcCCCCCCCCcceEEeccccCCCCCee--eCCCCCEeCC
Confidence 679999999853 2 4789999999 8998753 35676664 442 2 112223334567 5999999865
No 102
>3k51_B Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, cytokine, D bond, glycoprotein, membrane, secreted, signal-anchor, transmembrane, apoptosis; 2.45A {Homo sapiens} PDB: 3mi8_D 3mhd_D
Probab=96.60 E-value=0.0028 Score=59.22 Aligned_cols=50 Identities=26% Similarity=0.535 Sum_probs=35.4
Q ss_pred CCcccCCCCceec----CCCCCCceeCCCCceecCC-CCccccccccCCCCCeec
Q psy833 23 KTCTPCPRGFYQN----NDRQGVCLKCPMGTYTREE-GSKAVQECVPVCGYGTYS 72 (642)
Q Consensus 23 ~~C~~Cp~G~y~~----~~~~~~C~~Cp~g~~~~~~-gs~~~~~C~~~C~~G~y~ 72 (642)
.-|..||+|+|.. ......|.+|++|+|+... +...|..|...|..|.+.
T Consensus 20 ~cC~~CppG~~~~~~Ct~~~~t~C~pC~~gtY~~~~n~~~~C~~C~~~C~~~~~~ 74 (176)
T 3k51_B 20 LVCAQCPPGTFVQRPCRRDSPTTCGPCPPRHYTQFWNYLERCRYCNVLCGEREEE 74 (176)
T ss_dssp EEEECBCTTEEEEECCCSSSCCEEEECCTTEECCSCBCCSSCEECCCCCCSSEEE
T ss_pred CCCCCCCCCceeCccCCCCCCCccccCCCCCeecCCCCCCcCccccCcCCCCCEE
Confidence 3567899999964 2245789999999998754 344566666558777654
No 103
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=96.59 E-value=0.0015 Score=72.12 Aligned_cols=59 Identities=31% Similarity=0.782 Sum_probs=36.4
Q ss_pred CCCCccCCCCeeecCCCCCcccCCCCceecCCCCCCceeCCCCceecCCCCccccccccCCCCCeec
Q psy833 6 VPRCLHCPAGTFAGINQKTCTPCPRGFYQNNDRQGVCLKCPMGTYTREEGSKAVQECVPVCGYGTYS 72 (642)
Q Consensus 6 ~~~C~~C~~G~~~~~~~~~C~~Cp~G~y~~~~~~~~C~~Cp~g~~~~~~gs~~~~~C~~~C~~G~y~ 72 (642)
.++|. |.+||-.. ...|+.||.|+|....+...|.+||++..+...|+..|. |..||+.
T Consensus 262 ~G~C~-C~~G~e~~--~~~C~aC~~g~~k~~~~~~~C~~CP~~S~s~~~Gs~~C~-----C~ng~~r 320 (536)
T 3fl7_A 262 IGQCL-CQAGYEKV--EDACQACSPGFFKFEASESPCLECPEHTLPSPEGATSCE-----CEEGFFR 320 (536)
T ss_dssp BCCCE-ECTTEEEE--TTEEEECCTTEECCSCCSSCCEECCSSEECCCTTCSSCE-----ECTTCBC
T ss_pred cCcEe-ccCccccC--CceeeecCCCCCcccCCCCccccCCCCCCCCCCCccEEE-----Eeccccc
Confidence 35565 77777633 456777777777766666667777777666555554332 5555554
No 104
>3urf_Z Tumor necrosis factor receptor superfamily member; cystein-rich domain, beta-sandwich, cytokine; HET: NAG; 2.70A {Homo sapiens} PDB: 4e4d_R
Probab=96.59 E-value=0.0014 Score=60.93 Aligned_cols=65 Identities=31% Similarity=0.594 Sum_probs=43.1
Q ss_pred CCcccCCCCceecC----CCCCCceeCCCCceecCC-CCccccccccCCCCCeecCC-----CCCCcccCCCCccc
Q psy833 23 KTCTPCPRGFYQNN----DRQGVCLKCPMGTYTREE-GSKAVQECVPVCGYGTYSPT-----GLVPCLECPRNSYT 88 (642)
Q Consensus 23 ~~C~~Cp~G~y~~~----~~~~~C~~Cp~g~~~~~~-gs~~~~~C~~~C~~G~y~~~-----g~~~C~~C~~G~y~ 88 (642)
.-|..||+|+|... .....|.+|++|+|+... +...|..|...|..+.+... ....|. |..|+|.
T Consensus 18 ~cC~~CppG~~~~~~Ct~~~~t~C~~C~~gty~~~~n~~~~C~~C~~~C~~~~~~~~~CT~tsdtvC~-C~~G~~~ 92 (171)
T 3urf_Z 18 LLCDKCPPGTYLKQHCTAKWKTVCAPCPDHYYTDSWHTSDECLYCSPVCKELQYVKQECNRTHNRVCE-CKEGRYL 92 (171)
T ss_dssp CEEECBCTTEEEEECCCSSSCCEEEECCTTEECCSCBCCSSCEECCCCCCTTEEEEECCCSSSCCEEE-ECTTEEE
T ss_pred CCCCCCCCCceecccCCCCCCCccccCCCCcEecCCCCCCccccCcCccCCCCEEeccCcCCCCcccc-CCCCcEE
Confidence 45789999999753 245789999999998765 34566777656887765421 122344 5555554
No 105
>4fhq_A Tumor necrosis factor receptor superfamily member; cysteine rich domain, TNF receptor, structural genomics, PSI protein structure initiative; 2.25A {Homo sapiens} PDB: 2aw2_B*
Probab=96.22 E-value=0.0014 Score=58.36 Aligned_cols=76 Identities=24% Similarity=0.554 Sum_probs=44.3
Q ss_pred cCCCCeeecCCCCCcccCCCCceecC----CCCCCceeCCCCceecCC-CCccccccccCCCC--CeecC-----CCCCC
Q psy833 11 HCPAGTFAGINQKTCTPCPRGFYQNN----DRQGVCLKCPMGTYTREE-GSKAVQECVPVCGY--GTYSP-----TGLVP 78 (642)
Q Consensus 11 ~C~~G~~~~~~~~~C~~Cp~G~y~~~----~~~~~C~~Cp~g~~~~~~-gs~~~~~C~~~C~~--G~y~~-----~g~~~ 78 (642)
.|+.+.|.. ++.-|..||+|+|... .....|.+|++|+|+... +...|..|. .|.. |.... .....
T Consensus 5 ~C~~~eY~~-~~~CC~~CppG~~~~~~C~~~~~t~C~pC~~gtys~~~n~~~~C~~C~-~C~~~~g~~~~~~CT~t~dtv 82 (134)
T 4fhq_A 5 SCKEDEYPV-GSECCPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQ-MCDPAMGLRASRNCSRTENAV 82 (134)
T ss_dssp CCCTTEEEE-TTEEEECBCTTEEEEECCC--CCCEEEECCTTEECCSCBCCSSCEECC-CCCGGGTEEEEECCCSSSCCE
T ss_pred CCCcccEEC-cCcCCCCCCCCCEecccCCCCCCCcccCCCCCCEecCCCCCCcCcCCC-CCCccCCeEEeccCCCCCCcc
Confidence 477777775 2344677888887542 134568888888877653 334555565 4764 44321 12334
Q ss_pred cccCCCCcccC
Q psy833 79 CLECPRNSYTG 89 (642)
Q Consensus 79 C~~C~~G~y~~ 89 (642)
|. |..|+|..
T Consensus 83 C~-C~~G~~c~ 92 (134)
T 4fhq_A 83 CG-CSPGHFCI 92 (134)
T ss_dssp EE-ECTTEEEE
T ss_pred cc-CCCCCEec
Confidence 65 77777764
No 106
>4fhq_A Tumor necrosis factor receptor superfamily member; cysteine rich domain, TNF receptor, structural genomics, PSI protein structure initiative; 2.25A {Homo sapiens} PDB: 2aw2_B*
Probab=95.93 E-value=0.0054 Score=54.51 Aligned_cols=64 Identities=27% Similarity=0.623 Sum_probs=32.7
Q ss_pred CccCCCCeeecC-----CCCCcccCCCCceecCC-CCCCceeCCC-----CceecCC-CCccccccccCCCCCeecCC
Q psy833 9 CLHCPAGTFAGI-----NQKTCTPCPRGFYQNND-RQGVCLKCPM-----GTYTREE-GSKAVQECVPVCGYGTYSPT 74 (642)
Q Consensus 9 C~~C~~G~~~~~-----~~~~C~~Cp~G~y~~~~-~~~~C~~Cp~-----g~~~~~~-gs~~~~~C~~~C~~G~y~~~ 74 (642)
|..||+|+|... ....|.+||.|+|.+.. ....|++|.. |...... -+++-..|. |.+|||...
T Consensus 18 C~~CppG~~~~~~C~~~~~t~C~pC~~gtys~~~n~~~~C~~C~~C~~~~g~~~~~~CT~t~dtvC~--C~~G~~c~~ 93 (134)
T 4fhq_A 18 CPKCSPGYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVCG--CSPGHFCIV 93 (134)
T ss_dssp EECBCTTEEEEECCC--CCCEEEECCTTEECCSCBCCSSCEECCCCCGGGTEEEEECCCSSSCCEEE--ECTTEEEEE
T ss_pred CCCCCCCCEecccCCCCCCCcccCCCCCCEecCCCCCCcCcCCCCCCccCCeEEeccCCCCCCcccc--CCCCCEecC
Confidence 557777777532 23467777777777643 3355655532 2222111 122223453 777777653
No 107
>1mox_A Epidermal growth factor receptor; EGFR, receptor, complex, transferase-growth F complex; HET: NAG FUC BMA MAN; 2.50A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1
Probab=95.21 E-value=0.012 Score=64.21 Aligned_cols=85 Identities=26% Similarity=0.486 Sum_probs=54.5
Q ss_pred CCCCccCCCCeeecCCCCCcc-cCCCCceecCCCCCCceeCCCCceecCCCCccccccccCCCCCeecCCCCCCcc-cCC
Q psy833 6 VPRCLHCPAGTFAGINQKTCT-PCPRGFYQNNDRQGVCLKCPMGTYTREEGSKAVQECVPVCGYGTYSPTGLVPCL-ECP 83 (642)
Q Consensus 6 ~~~C~~C~~G~~~~~~~~~C~-~Cp~G~y~~~~~~~~C~~Cp~g~~~~~~gs~~~~~C~~~C~~G~y~~~g~~~C~-~C~ 83 (642)
...|+.|....+ .++|. .||.|+|.+. ....|..+|.+.+.. +..|...|+.+|+...+ ..|. .||
T Consensus 221 ~~~C~~C~~~~~----~~~Cv~~Cp~g~y~~~-~~~~~~~~p~~~~~~------~~~Cv~~Cp~~~~l~~~-g~Cv~~Cp 288 (501)
T 1mox_A 221 ESDCLVCRKFRD----EATCKDTCPPLMLYNP-TTYQMDVNPEGKYSF------GATCVKKCPRNYVVTDH-GSCVRACG 288 (501)
T ss_dssp STTEEEESSEEE----TTEEESSCCCSEEEET-TTTEEEECTTCCEEE------TTEEESSCCTTCEECTT-SBEESSCC
T ss_pred CcccccccccCC----CCcccccCCCCeeecC-CceEEecCCCccccc------hhhhhcccCcccEeccC-CEEeccCC
Confidence 456888877322 46886 5999988876 334456677777653 23676678888877222 3574 789
Q ss_pred CCcccCCCCCCCCCCCCCCCC
Q psy833 84 RNSYTGEPPVGGHKDCEACPA 104 (642)
Q Consensus 84 ~G~y~~~~p~~g~~~C~~Cp~ 104 (642)
.|+|.... .+...|.+|..
T Consensus 289 ~G~y~~~~--~~~~~C~~C~~ 307 (501)
T 1mox_A 289 ADSYEMEE--DGVRKCKKCEG 307 (501)
T ss_dssp SSCCCBCS--SSSCBCCCC-C
T ss_pred CCCeecCC--CCCCcCcCCCc
Confidence 99887531 24457887754
No 108
>2psm_F Interleukin-15 receptor alpha chain; cytokine, glycoprotein, secreted, alternative splicing, endoplasmic reticulum, golgi apparatus, membrane; 2.19A {Mus musculus} SCOP: g.18.1.1
Probab=95.20 E-value=0.019 Score=45.11 Aligned_cols=46 Identities=24% Similarity=0.432 Sum_probs=36.5
Q ss_pred cCcCCCCCCCCCcEEEccCCccccccCCCCCEEEEEccCCCeEEe--CCCceeeCC
Q psy833 257 GPVCSDPGRPVDGYQVATSYEQVRYDDEQGSEVQFGCNKPGYILI--NPRPITCVR 310 (642)
Q Consensus 257 ~~~C~~p~~~~~g~~~~~~~~~~~~~~~~gs~~~~~C~~~Gy~l~--G~~~~~C~~ 310 (642)
.+.|++|+...|..+....|. +++++.|.|+ +||+.. +++.+.|..
T Consensus 8 ~~~C~~Pp~ve~a~~r~~~y~-------v~s~vRYqC~-~Gf~rr~g~s~lirC~~ 55 (78)
T 2psm_F 8 GTTCPPPVSIEHADIRVKNYS-------VNSRERYVCN-SGFKRKAGTSTLIECVI 55 (78)
T ss_dssp --CCCCCCCCTTEECCCSCCS-------TTCEEECEEC-TTEEECTTCCCEEEEEE
T ss_pred CCcCCCCCcccccccceeeec-------cCCEEEEecc-hhHHhhCCCCCceEEEc
Confidence 458999999999877333454 9999999999 999765 577999987
No 109
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=95.18 E-value=0.02 Score=59.60 Aligned_cols=61 Identities=31% Similarity=0.611 Sum_probs=44.9
Q ss_pred CcCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCccccCCccCCCceEEeccCCeecCC-----CC
Q psy833 179 PVCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTFKLAGQTDKNDNVVRCQANGIWDFG-----DL 253 (642)
Q Consensus 179 ~~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~-----~P 253 (642)
..|+.|+.++||. + ...++|+|++.|+|..... ...+|.++|+|+.. .|
T Consensus 31 ~~c~~p~~~~~g~-~----------------------~~~i~y~C~~~y~~~~~~~---~~~~c~~~g~w~~~~~~~~lp 84 (347)
T 4f4o_C 31 DSCPKPPEIPKGY-V----------------------EHMVRYHCQTYYKLRTAGD---GVYTLDSNKQWTNKVTGEKLP 84 (347)
T ss_dssp --CCCCCCBTTEE-E----------------------EEEEEEEECTTEEEECSSC---SEEEECTTSCEEBTTTBTCCC
T ss_pred CcCCCCCCCCCce-e----------------------ceeeEEcCCCccEeccCCC---CCEEECCCCCEeCCCCCccCC
Confidence 3588888888987 1 1237999999998864432 35899999999854 48
Q ss_pred ceecCcCCCCCCC
Q psy833 254 RCEGPVCSDPGRP 266 (642)
Q Consensus 254 ~C~~~~C~~p~~~ 266 (642)
.|++ .|+.|..+
T Consensus 85 ~C~p-~CG~p~~~ 96 (347)
T 4f4o_C 85 ECEA-VCGKPKNP 96 (347)
T ss_dssp EEEE-CCSCCSSC
T ss_pred CccC-CCCCCCCC
Confidence 9998 69987554
No 110
>1mox_A Epidermal growth factor receptor; EGFR, receptor, complex, transferase-growth F complex; HET: NAG FUC BMA MAN; 2.50A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1
Probab=94.38 E-value=0.04 Score=60.02 Aligned_cols=70 Identities=19% Similarity=0.328 Sum_probs=42.1
Q ss_pred CCCc-cCCCCeeecCCCCCcccCCCCce-e-cCCCCCCceeCCCCceecCCCCccccccccCCCCCeecCCCCCCcccCC
Q psy833 7 PRCL-HCPAGTFAGINQKTCTPCPRGFY-Q-NNDRQGVCLKCPMGTYTREEGSKAVQECVPVCGYGTYSPTGLVPCLECP 83 (642)
Q Consensus 7 ~~C~-~C~~G~~~~~~~~~C~~Cp~G~y-~-~~~~~~~C~~Cp~g~~~~~~gs~~~~~C~~~C~~G~y~~~g~~~C~~C~ 83 (642)
..|. .|+.|+|.. ....| |....- . ...+...|.+|... ... ..|...|++|+|.......+..+|
T Consensus 189 ~~C~~~C~~~~~~~-~~~~C--Ch~~C~~~C~gp~~~~C~~C~~~--~~~------~~Cv~~Cp~g~y~~~~~~~~~~~p 257 (501)
T 1mox_A 189 IICAQQCSGRCRGK-SPSDC--CHNQCAAGCTGPRESDCLVCRKF--RDE------ATCKDTCPPLMLYNPTTYQMDVNP 257 (501)
T ss_dssp SSCCTTCSSCBSSS-STTSB--CCTTEEEEESSSSSTTEEEESSE--EET------TEEESSCCCSEEEETTTTEEEECT
T ss_pred CcccCcCCcccccC-CCCCe--ECCccCCccCCCCCccccccccc--CCC------CcccccCCCCeeecCCceEEecCC
Confidence 4677 899888853 34566 544332 1 12245679999874 211 378889999998765443333334
Q ss_pred CCcc
Q psy833 84 RNSY 87 (642)
Q Consensus 84 ~G~y 87 (642)
.+.|
T Consensus 258 ~~~~ 261 (501)
T 1mox_A 258 EGKY 261 (501)
T ss_dssp TCCE
T ss_pred Cccc
Confidence 4433
No 111
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=93.92 E-value=0.12 Score=48.61 Aligned_cols=86 Identities=21% Similarity=0.235 Sum_probs=54.3
Q ss_pred ecceEEEEEEEeCCCCEEE-EEEEEEEecCCCCeEe--CCCCcEEEccCCCceeEEEecCCCcceeeecCCC-CeEEEeC
Q psy833 547 FHDMAVKYIAYDFDGNVAI-CEINITVVDETPPLLS--CPQSYIIELVDKQDSYVMNFNETRRRVNVSDASG-EVTVTFS 622 (642)
Q Consensus 547 ~G~~~Vtyta~D~~Gn~a~-C~f~v~v~d~~pP~i~--Cp~~~~i~~~~~~~~~~v~w~~p~~~~~~~Dnsg-~~~v~~~ 622 (642)
-|.+.|+..|+|.+||... =.+.|+|.+++||.+. =|........ ...|++.- .++|+.| +..|.+-
T Consensus 60 ~G~htlta~A~D~aGn~s~s~~v~vtV~~~~~Ptv~itsP~~g~~~~~----~~~vtl~~-----~AsD~~g~V~~Ve~~ 130 (190)
T 3pdd_A 60 VGAYNLKAVAVLSDGRRIESPVTPVLVKVIVKPTVKLTAPKSNVVAYG----NEFLKITA-----TASDSDGKISRVDFL 130 (190)
T ss_dssp SEEEEEEEEEEETTSCEEECCCEEEEEECCCCCEEEEEECCTTCCCBT----TSEEEEEE-----EEECSSSCEEEEEEE
T ss_pred CccEEEEEEEEECCCCEeeecceeEEeccCCCCceeecCCCCCcEEec----CCeEEEEE-----EEECCCCcEEEEEEE
Confidence 3999999999999999865 3477877778999764 3332221111 12333332 5778877 5555432
Q ss_pred CC----------Cccc----cCCCceEEEEEEeC
Q psy833 623 PD----------RATI----LLGDFENVTVTAAD 642 (642)
Q Consensus 623 ~~----------~g~~----~~G~~~~v~~tatD 642 (642)
-+ +-.+ +.|.| +|+..|+|
T Consensus 131 ~dg~~v~t~t~~~y~~~~~~~~G~~-tl~a~A~D 163 (190)
T 3pdd_A 131 VDGEVIGSDREAPYEYEWKAVEGNH-EISVIAYD 163 (190)
T ss_dssp ETTEEEEEECSSSEEEEEECCSEEE-EEEEEEEE
T ss_pred ECCEEEecccCCCEEEEEecCCeeE-EEEEEEEE
Confidence 11 1111 57888 99999988
No 112
>2z3q_B Interleukin-15 receptor alpha chain; protein-protein complex, cytokine/cytokine receptor complex; 1.85A {Homo sapiens} SCOP: g.18.1.1 PDB: 2z3r_B 2ers_A
Probab=93.81 E-value=0.062 Score=44.31 Aligned_cols=46 Identities=22% Similarity=0.304 Sum_probs=36.9
Q ss_pred cCcCCCCCCCCCcEEEccCCccccccCCCCCEEEEEccCCCeEEe--CCCceeeCC
Q psy833 257 GPVCSDPGRPVDGYQVATSYEQVRYDDEQGSEVQFGCNKPGYILI--NPRPITCVR 310 (642)
Q Consensus 257 ~~~C~~p~~~~~g~~~~~~~~~~~~~~~~gs~~~~~C~~~Gy~l~--G~~~~~C~~ 310 (642)
.+.|+.|+...|..+....|. +|++++|.|+ +||+.. +++.+.|..
T Consensus 5 ~~~C~~Pp~~EHad~rv~~y~-------v~s~vRYqC~-~Gykrkagtsali~Ck~ 52 (107)
T 2z3q_B 5 SITCPPPMSVEHADIWVKSYS-------LYSRERYICN-SGFKRKAGTSSLTECVL 52 (107)
T ss_dssp CCBCCCCCCCTTEECCCSCCB-------TTCEEECEEC-TTEEECTTCCCEEEEEE
T ss_pred CccCCCCCCcccccceeEEec-------cCCEEEEecc-hhhhhhcCCCCccEEEe
Confidence 368999999999877544555 9999999999 999654 467889985
No 113
>1m6b_A C-ER, receptor protein-tyrosine kinase ERBB-3; cell surface receptor, immunity, signaling transferase; HET: NAG NDG; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 3p11_A*
Probab=93.29 E-value=0.028 Score=63.05 Aligned_cols=28 Identities=21% Similarity=0.363 Sum_probs=13.5
Q ss_pred CCcc-cCCCCceecCCCCCCceeCCCCcee
Q psy833 23 KTCT-PCPRGFYQNNDRQGVCLKCPMGTYT 51 (642)
Q Consensus 23 ~~C~-~Cp~G~y~~~~~~~~C~~Cp~g~~~ 51 (642)
..|+ .||.|+|.+. ....|..||.+.|.
T Consensus 234 ~~Cv~~Cp~~~~~~~-~~~~~~~~p~~~y~ 262 (621)
T 1m6b_A 234 GACVPRCPQPLVYNK-LTFQLEPNPHTKYQ 262 (621)
T ss_dssp TEEESSCSCSEEECT-TTSSEEECTTCCEE
T ss_pred CceeccCCCcccccc-cceeeeeCCccccc
Confidence 4554 3566655443 23345555555544
No 114
>1yy9_A Epidermal growth factor receptor; cell surface receptor, tyrosine kinase, glycoprotein, antigen:antibody complex, FAB fragment, antitumor, drug; HET: NDG NAG BMA MAN; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 3qwq_A* 1nql_A* 3b2v_A* 1ivo_A* 3njp_A*
Probab=93.23 E-value=0.041 Score=61.66 Aligned_cols=22 Identities=36% Similarity=0.987 Sum_probs=10.2
Q ss_pred ccccCCCCCeecCC--CCCCcccC
Q psy833 61 ECVPVCGYGTYSPT--GLVPCLEC 82 (642)
Q Consensus 61 ~C~~~C~~G~y~~~--g~~~C~~C 82 (642)
+|...|++|+|... +...|.+|
T Consensus 282 ~Cv~~CP~g~~~~~~~~~~~C~~C 305 (624)
T 1yy9_A 282 SCVRACGADSYEMEEDGVRKCKKC 305 (624)
T ss_dssp BEESSCCTTEEEEESSSCEEEEEC
T ss_pred eEeccCCCCCccccCCCCcccccC
Confidence 45555555555432 23345544
No 115
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=92.99 E-value=0.09 Score=54.58 Aligned_cols=60 Identities=27% Similarity=0.521 Sum_probs=43.0
Q ss_pred CCCCCCCCCCCCccceecCCCCeeeEEeCCCCeecc--CCcCCCCceEecccCCeeecCC-----CCccCCcCCCCCCC
Q psy833 116 RNFCRVPTPGAEYGNFLDTRYQSSFFFGCQDTFKLA--GQTDKNDNVVRCQANGIWDFGD-----LRCEGPVCSDPGRP 187 (642)
Q Consensus 116 ~~~C~~~~~~p~nG~~~~~~~~~~~~~~C~~Gy~l~--g~~~~~~~~~~C~~~G~Ws~~~-----p~C~~~~C~~p~~~ 187 (642)
...|. .++..+||++. +..+|+|++.|+|. ++. ..+|.++|.|+... |.|+++ |+.|..+
T Consensus 30 ~~~c~-~p~~~~~g~~~-----~~i~y~C~~~y~~~~~~~~-----~~~c~~~g~w~~~~~~~~lp~C~p~-CG~p~~~ 96 (347)
T 4f4o_C 30 DDSCP-KPPEIPKGYVE-----HMVRYHCQTYYKLRTAGDG-----VYTLDSNKQWTNKVTGEKLPECEAV-CGKPKNP 96 (347)
T ss_dssp ---CC-CCCCBTTEEEE-----EEEEEEECTTEEEECSSCS-----EEEECTTSCEEBTTTBTCCCEEEEC-CSCCSSC
T ss_pred CCcCC-CCCCCCCceec-----eeeEEcCCCccEeccCCCC-----CEEECCCCCEeCCCCCccCCCccCC-CCCCCCC
Confidence 34576 45677788754 23489999999874 455 89999999998653 899987 9876543
No 116
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=92.97 E-value=0.087 Score=57.98 Aligned_cols=56 Identities=30% Similarity=0.712 Sum_probs=29.1
Q ss_pred CCCCeecCC-CCCCcccCCCCcccCCCCCCCCCCCCCCCCceeeccCCCCCCCCCCCCCCCC
Q psy833 66 CGYGTYSPT-GLVPCLECPRNSYTGEPPVGGHKDCEACPANMFTYQPAAPARNFCRVPTPGA 126 (642)
Q Consensus 66 C~~G~y~~~-g~~~C~~C~~G~y~~~~p~~g~~~C~~Cp~G~~~~~~~~~s~~~C~~~~~~p 126 (642)
|++|+|... +...|.+||....... .|...|. |..|++.... ......|..++.+|
T Consensus 281 C~~g~~k~~~~~~~C~~CP~~S~s~~---~Gs~~C~-C~ng~~ra~~-d~~~~~ct~pPsaP 337 (536)
T 3fl7_A 281 CSPGFFKFEASESPCLECPEHTLPSP---EGATSCE-CEEGFFRAPQ-DPASMPCTRPPSAP 337 (536)
T ss_dssp CCTTEECCSCCSSCCEECCSSEECCC---TTCSSCE-ECTTCBCCTT-CCTTSCCBCCCCCB
T ss_pred cCCCCCcccCCCCccccCCCCCCCCC---CCccEEE-EeccccccCC-CccccccccCCCcc
Confidence 455554433 4456777777665544 3666777 7777653222 12234454444444
No 117
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=92.04 E-value=0.14 Score=52.76 Aligned_cols=63 Identities=21% Similarity=0.403 Sum_probs=45.2
Q ss_pred CCCCCCCCCCCccceecCC-C--CeeeEEeCCCCe-eccCC--cCCCCceEecccCCeeec-----CCCCccCCcCCCCC
Q psy833 117 NFCRVPTPGAEYGNFLDTR-Y--QSSFFFGCQDTF-KLAGQ--TDKNDNVVRCQANGIWDF-----GDLRCEGPVCSDPG 185 (642)
Q Consensus 117 ~~C~~~~~~p~nG~~~~~~-~--~~~~~~~C~~Gy-~l~g~--~~~~~~~~~C~~~G~Ws~-----~~p~C~~~~C~~p~ 185 (642)
..|+ .++.++||.+.... . ....+|.|+.|| .|.+. . .++|..+|.|.. ..|.|.+. |+.+.
T Consensus 2 v~C~-~p~~~~~g~~~~~~~~~~~s~~~~~C~~~yy~~~~~~~~-----~~~C~~~g~w~~~~~~~~~~~c~~~-CG~~~ 74 (333)
T 1elv_A 2 LDCG-IPESIENGKVEDPESTLFGSVIRYTCEEPYYYMENGGGG-----EYHCAGNGSWVNEVLGPELPKCVPV-CGVPR 74 (333)
T ss_dssp CBCC-SCCCCTTEEECCCSCCBTTCEEEEEECTTTEEEC--CCS-----EEEECTTSCEEBTTTBTSCCCEEEC-CSCCS
T ss_pred CCCC-CCCcccCCceecCCCCccceeEEEECCCCeEeeecCCCc-----eEEECCCCeEcccccccccccccCC-cCCCC
Confidence 3577 56788999887332 1 223499999996 56655 6 899999999997 67899874 98765
Q ss_pred C
Q psy833 186 R 186 (642)
Q Consensus 186 ~ 186 (642)
.
T Consensus 75 ~ 75 (333)
T 1elv_A 75 E 75 (333)
T ss_dssp S
T ss_pred C
Confidence 3
No 118
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=92.04 E-value=0.24 Score=45.32 Aligned_cols=37 Identities=32% Similarity=0.811 Sum_probs=26.6
Q ss_pred CCCCccCCCCeeecCCCCCcccCCCCceecCCC----CCCceeCC
Q psy833 6 VPRCLHCPAGTFAGINQKTCTPCPRGFYQNNDR----QGVCLKCP 46 (642)
Q Consensus 6 ~~~C~~C~~G~~~~~~~~~C~~Cp~G~y~~~~~----~~~C~~Cp 46 (642)
...|+.|++||. ...|..|+.|||..... ...|++|.
T Consensus 17 ~~~C~~C~~g~~----G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~ 57 (162)
T 1klo_A 17 EVVCTHCPTGTA----GKRCELCDDGYFGDPLGSNGPVRLCRPCQ 57 (162)
T ss_dssp CEEECSCCTTEE----STTSCEECTTEEEETTCTTSSCEEEEECC
T ss_pred CEEeCCCCCCCc----CCCCcCCCCCCcCCcccccCCCCCCeeCc
Confidence 346878999887 35888899999986432 23688775
No 119
>3i2t_A Epidermal growth factor receptor, isoform A; EGFR, ectodomain, unliganded, autoinhibited, ATP nucleotide-binding, tyrosine-protein kinase; HET: NDG NAG BMA; 2.70A {Drosophila melanogaster} PDB: 3ltf_A* 3ltg_A
Probab=91.59 E-value=0.1 Score=57.38 Aligned_cols=21 Identities=24% Similarity=0.629 Sum_probs=10.7
Q ss_pred ccccCCCCCeecCCCCCCcccCC
Q psy833 61 ECVPVCGYGTYSPTGLVPCLECP 83 (642)
Q Consensus 61 ~C~~~C~~G~y~~~g~~~C~~C~ 83 (642)
.|...|++|+|... ..|.+|.
T Consensus 283 ~Cv~~CP~g~~~~~--~~C~~C~ 303 (551)
T 3i2t_A 283 ACVRSCPQDKMDKG--GECVPCN 303 (551)
T ss_dssp EEESSCCTTEEESS--SBEEECS
T ss_pred cccccCCCCCcccC--CeeeECC
Confidence 45555666655432 2455553
No 120
>1n8y_C Protooncoprotein; tyrosin kinase receptor, cell surface receptor, transferase; HET: NAG; 2.40A {Rattus norvegicus} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 1n8z_C* 3be1_A* 1s78_A* 3mzw_A* 3n85_A* 2a91_A* 3h3b_A
Probab=91.01 E-value=0.099 Score=58.36 Aligned_cols=25 Identities=24% Similarity=0.453 Sum_probs=14.4
Q ss_pred CCCCccCCCCeeecCCCCCcc-cCCCCcee
Q psy833 6 VPRCLHCPAGTFAGINQKTCT-PCPRGFYQ 34 (642)
Q Consensus 6 ~~~C~~C~~G~~~~~~~~~C~-~Cp~G~y~ 34 (642)
+..|+.|.. ++ . .+.|+ .||.|+|-
T Consensus 228 ~~~C~aC~~-~~-~--~g~Cv~~CP~~~~y 253 (608)
T 1n8y_C 228 HSDCLACLH-FN-H--SGICELHCPALVTY 253 (608)
T ss_dssp TTSBSSBSS-EE-E--TTEEESSCCCSEEC
T ss_pred CCccccCcc-cc-c--CCchhccCCCcccc
Confidence 345777775 22 2 35775 47777643
No 121
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=90.16 E-value=0.33 Score=44.40 Aligned_cols=26 Identities=35% Similarity=0.750 Sum_probs=14.8
Q ss_pred CCCccCCCCeeecCCCCCcccCCCCceecC
Q psy833 7 PRCLHCPAGTFAGINQKTCTPCPRGFYQNN 36 (642)
Q Consensus 7 ~~C~~C~~G~~~~~~~~~C~~Cp~G~y~~~ 36 (642)
.+|+.|++|+. ...|..|+.|||...
T Consensus 75 G~C~~C~~g~~----G~~Ce~C~~Gy~g~~ 100 (162)
T 1klo_A 75 GECLKCIYNTA----GFYCDRCKEGFFGNP 100 (162)
T ss_dssp CCBCCBCTTEE----TTTTCEECTTEEECT
T ss_pred CcccCCCCCCc----CCCcCcCchhhcCCc
Confidence 44555666654 345666666666654
No 122
>3hny_M Coagulation factor VIII; blood clotting, acute phase, blood coagulation, calcium, DIS mutation, disulfide bond, glycoprotein, hemophilia; 1.07A {Homo sapiens} SCOP: b.18.1.2 PDB: 3hnb_M 3hob_M 1d7p_M 1iqd_C 1cfg_A 1fac_A
Probab=90.07 E-value=1.6 Score=39.61 Aligned_cols=43 Identities=23% Similarity=0.518 Sum_probs=33.4
Q ss_pred CCCccCcccc--cCccceeeeeEEeeEEEEEeCcccceeecccCC
Q psy833 430 PGNYGELAMI--TLPKFVQARFVILGIVSYMDNACLKFELMGCEE 472 (642)
Q Consensus 430 ~g~~~~~~~~--~~~~~~~~~~~~~~~v~~~C~~~~gf~l~GC~~ 472 (642)
.|+......+ .+.+++.+||+..-..++.-..+|.+||.||.+
T Consensus 115 ~GN~d~~t~v~~~l~~pi~ARyvRi~P~~w~~~i~lR~El~GC~~ 159 (159)
T 3hny_M 115 QGNQDSFTPVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCEA 159 (159)
T ss_dssp ECCSSSSSCEEEEEEEEEEEEEEEEEEEEEESSCCBEEEEEEEEC
T ss_pred eccCCCCcEEEEECCCCcEEEEEEEEEEEeCCccEEEEEEEccCC
Confidence 3555544322 356678999999999999999999999999963
No 123
>2ahx_A P180ERBB4, receptor tyrosine-protein kinase ERBB-4; X-RAY crystallography, neuregulins, heparin-binding, cell CY signaling protein; HET: NAG NDG; 2.40A {Homo sapiens} PDB: 3u2p_A*
Probab=89.58 E-value=0.3 Score=54.70 Aligned_cols=42 Identities=19% Similarity=0.506 Sum_probs=24.2
Q ss_pred CCCCCccCCCCeeecCCCCCcc-cCCCCceecC--CCCCCceeCCCCce
Q psy833 5 QVPRCLHCPAGTFAGINQKTCT-PCPRGFYQNN--DRQGVCLKCPMGTY 50 (642)
Q Consensus 5 ~~~~C~~C~~G~~~~~~~~~C~-~Cp~G~y~~~--~~~~~C~~Cp~g~~ 50 (642)
....|+.|+. |.. .++|+ .||.|+|... .....|.+|.....
T Consensus 492 ~~~~C~sC~~--~~~--~~~Cv~~Cp~~~~~~~~~~~~~~C~~Ch~~C~ 536 (617)
T 2ahx_A 492 GPDQCLSCRR--FSR--GRICIESCNLYDGEFREFENDSICVECDPQCE 536 (617)
T ss_dssp STTSBSSBSS--EEE--TTEEESCCSSSSSSSCEEEETTEEEECCTTBC
T ss_pred Cchhhhhccc--ccc--CCeeccccCCCcCcccccCCCCchhhcChhhh
Confidence 3456788874 332 46886 5988755321 02446888876543
No 124
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=89.31 E-value=0.27 Score=41.27 Aligned_cols=58 Identities=22% Similarity=0.340 Sum_probs=41.3
Q ss_pred CCCCeEeCCCCcEEEccCCCceeEEEecCCCcceeeecCCC-CeE--EEeCCCCccc-cCCCceEEEEEEeC
Q psy833 575 ETPPLLSCPQSYIIELVDKQDSYVMNFNETRRRVNVSDASG-EVT--VTFSPDRATI-LLGDFENVTVTAAD 642 (642)
Q Consensus 575 ~~pP~i~Cp~~~~i~~~~~~~~~~v~w~~p~~~~~~~Dnsg-~~~--v~~~~~~g~~-~~G~~~~v~~tatD 642 (642)
.++|+|+-+.+.+|..+. .|+++ ..++|.|+-+ .++ |..+ ...+. ..|.+ .|+|+++|
T Consensus 8 ~~~P~It~~~d~tI~~Gd-------~fd~~-~gvtA~D~~DGDlT~~I~V~-g~Vdt~k~G~Y-~VtY~VtD 69 (103)
T 2kpn_A 8 DLEPKLTVPVGATIHVGD-------SFVPM-AEVLAIDKEDGDLTSKIKVD-GEVDTTKAGTY-VLTYTVTD 69 (103)
T ss_dssp CCCCEEECCSEEEEETTC-------CCCHH-HHCEEECSSSCBCGGGCEEE-SCCCSSSCEEE-EEEEEEEC
T ss_pred CCCCEEEeCCCEEEECCC-------Ccccc-cCcEEEcCCCCCcceeEEEe-CcccCCCceEE-EEEEEEEc
Confidence 588999988888887753 45544 3568999765 443 4433 33455 89999 99999998
No 125
>4deq_A Neuropilin-1, vascular endothelial growth factor; coagulation factor domain, heparin binding domain, angiogene protein binding-cytokine complex; 2.65A {Homo sapiens} PDB: 1kmx_A 1vgh_A 2vgh_A
Probab=88.55 E-value=2.1 Score=40.96 Aligned_cols=134 Identities=19% Similarity=0.240 Sum_probs=73.7
Q ss_pred CCCCCCccCCCCCCCccCCC-cCceecccccCCCCCCCcccccccccceeeecc-CCcccCcc---ce--eEEe-eEEee
Q psy833 319 PLGLASGRIPDSSINATSES-PYLVRVNACSVPLIPGPRVQELLAEKNVRLFNV-LRTLANME---VY--VYRL-AILVK 390 (642)
Q Consensus 319 p~~~~~g~~~~~~~~~~~~~-~~y~~~~~~~~~~~~g~~~~~~l~g~~~~~c~~-~gWs~~~p---~c--v~~~-~~~~~ 390 (642)
|.|+.+|.|++..+..-+.. .+| .....|+-.. ++|++... .- |.-. ...|.
T Consensus 9 pLGmesg~I~D~qITASS~~~~~~--------------------~P~~ARLn~~~~aW~a~~~d~~qWLQVDLg~~~~Vt 68 (218)
T 4deq_A 9 ALGMESGEIHSDQITASSQYSTNW--------------------SAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVT 68 (218)
T ss_dssp ECSTTTTCSCGGGEEESCCSCGGG--------------------CGGGCBTTCSSCCBCCSSCSTTCCEEEEEEEEEEEE
T ss_pred CcccCCCCcCcccEEEeccCCCCC--------------------ChhHeEEcCCCCeECCCCCCCCCeEEEeCCCcEEEE
Confidence 67899999998876444421 222 1222222222 34887653 23 2211 33455
Q ss_pred ceeccccc-------ccceeeeeeEeeccccceEEeeccceeccCCCCCccCcccc--cCccceeeeeEEeeEEEEEeCc
Q psy833 391 GVVTNDIV-------GRPTEIRFFYKQAESENFVVYFPNFNLTMRDPGNYGELAMI--TLPKFVQARFVILGIVSYMDNA 461 (642)
Q Consensus 391 g~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~v~~~C~~ 461 (642)
|+.+.... ..++.+.+.|-.. ..+|..|...- ......|+......+ .+.+++.++|+..-..++.-..
T Consensus 69 gV~tQG~~~~~~~~~~~VtsY~l~yS~D-G~~W~~y~~~~-~~kvF~GN~D~~t~v~~~l~~Pi~ARyVRi~P~~w~~~i 146 (218)
T 4deq_A 69 AVGTQGAISKETKKKYYVKTYKIDVSSN-GEDWITIKEGN-KPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGI 146 (218)
T ss_dssp EEEEECEECTTTCCEEEEEEEEEEEESS-SSSCEECEETT-EECCEECCSSSSSCEEEEEEEEEEEEEEEEEEEEEESSC
T ss_pred EEEEEeccCCCCCccceEEEEEEEEEeC-CCceEEeecce-eeecccCcCCCCceEEEeCCCCEEEEEEEEEeeeecCCc
Confidence 66544321 2233444444322 23465553221 111224565544332 3456789999999999999999
Q ss_pred ccceeecccCCCC
Q psy833 462 CLKFELMGCEEPK 474 (642)
Q Consensus 462 ~~gf~l~GC~~~g 474 (642)
+|.+||.||....
T Consensus 147 ~lRvElyGC~~~~ 159 (218)
T 4deq_A 147 SMRFEVYGCKITD 159 (218)
T ss_dssp CBEEEEEEECTTT
T ss_pred EEEEEEEeecccc
Confidence 9999999997643
No 126
>2hr7_A Insulin receptor; hormone receptor, leucine rich repeat, transferase; HET: NAG BMA MAN FUC P33; 2.32A {Homo sapiens}
Probab=88.29 E-value=0.36 Score=52.27 Aligned_cols=13 Identities=31% Similarity=0.562 Sum_probs=7.3
Q ss_pred ccccCCCCCeecC
Q psy833 61 ECVPVCGYGTYSP 73 (642)
Q Consensus 61 ~C~~~C~~G~y~~ 73 (642)
.|...|++|+|..
T Consensus 236 ~Cv~~CP~g~y~~ 248 (486)
T 2hr7_A 236 RCVETCPPPYYHF 248 (486)
T ss_dssp EEESSCCTTCEEE
T ss_pred ccccccCCCeEec
Confidence 4555666666543
No 127
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=88.18 E-value=0.86 Score=46.67 Aligned_cols=72 Identities=25% Similarity=0.527 Sum_probs=48.8
Q ss_pred cCCCCCCCCCceeeecceeeeeeCCcCCCCccccccCcEEEEEcccCc-cccCCc---cCCCceEEeccCCeecCC----
Q psy833 180 VCSDPGRPVDGYQVATSYEQVRYDDEQYGNFLDTRYQSSFFFGCQDTF-KLAGQT---DKNDNVVRCQANGIWDFG---- 251 (642)
Q Consensus 180 ~C~~p~~~~~g~~~~~~~~~C~~~~~~~g~~~~~~~gs~~~~~C~~Gy-~l~G~~---~~~~~~~~C~~~G~Ws~~---- 251 (642)
.|..|..+.||.+... + . ...+.|+++++|+|++.| .|.+.. .......+|..+|.|...
T Consensus 1 ~c~~p~~~~~g~~~~~-----~------~-~~~~~~~~~~~y~c~~~~~~~~~~~~~~~~~~~~~~C~~~~~w~~~~~~~ 68 (329)
T 1md8_A 1 DCGQPRNLPNGDFRYT-----T------T-MGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGE 68 (329)
T ss_dssp CCCSCCCCTTEEEEES-----S------S-TTCCSTTCEEEEEECTTTEEECC--------CCEEEECTTSSEECSSCCS
T ss_pred CCCCCCCcCCCceeee-----c------C-CCCcccceEEEeecCCcceEeeccCCccccCCCceEECCCccccCccCcc
Confidence 4889999999973211 0 1 134789999999999875 666641 000135899999999853
Q ss_pred -CCceecCcCCCCC
Q psy833 252 -DLRCEGPVCSDPG 264 (642)
Q Consensus 252 -~P~C~~~~C~~p~ 264 (642)
.|.|.. .|+.+.
T Consensus 69 ~~~~c~~-~CG~~~ 81 (329)
T 1md8_A 69 KIPRCLP-VCGKPV 81 (329)
T ss_dssp SCCCEEE-CCSCCS
T ss_pred ccCCCCC-CCCCCC
Confidence 578887 598764
No 128
>1m6b_A C-ER, receptor protein-tyrosine kinase ERBB-3; cell surface receptor, immunity, signaling transferase; HET: NAG NDG; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 3p11_A*
Probab=86.66 E-value=0.24 Score=55.40 Aligned_cols=24 Identities=25% Similarity=0.348 Sum_probs=10.4
Q ss_pred cCCCCeeecCCCCCcccCCCCcee
Q psy833 11 HCPAGTFAGINQKTCTPCPRGFYQ 34 (642)
Q Consensus 11 ~C~~G~~~~~~~~~C~~Cp~G~y~ 34 (642)
.||+|+|.+....+|..||.++|.
T Consensus 239 ~Cp~~~~~~~~~~~~~~~p~~~y~ 262 (621)
T 1m6b_A 239 RCPQPLVYNKLTFQLEPNPHTKYQ 262 (621)
T ss_dssp SCSCSEEECTTTSSEEECTTCCEE
T ss_pred cCCCcccccccceeeeeCCccccc
Confidence 444444443333444444444443
No 129
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=86.54 E-value=0.92 Score=37.96 Aligned_cols=74 Identities=14% Similarity=0.230 Sum_probs=44.0
Q ss_pred CCCCeeecCCCCceEEEeCCCCeeeEEEcCC---ceecCCCcee--EEEEccCCCCCCceeecceEEEEEEEeCCCCEEE
Q psy833 491 NEPPVFQNCPQQPIIVRKGPNGIEPVNITEP---VAVDNSGSIA--RLEIKPQSFKTPMITFHDMAVKYIAYDFDGNVAI 565 (642)
Q Consensus 491 ~~pP~~~~CP~~~i~~~~~~~~~~~v~~~~p---~~~dnsg~~~--~~~~~~~~~~~~~~~~G~~~Vtyta~D~~Gn~a~ 565 (642)
..+|+| .-|.+ +.+.... .|..+ +|.|+.+.-. .+.+. ... ...--|...|+|+++|.+||.++
T Consensus 8 ~~~P~I-t~~~d-~tI~~Gd------~fd~~~gvtA~D~~DGDlT~~I~V~-g~V--dt~k~G~Y~VtY~VtDs~Gn~~t 76 (103)
T 2kpn_A 8 DLEPKL-TVPVG-ATIHVGD------SFVPMAEVLAIDKEDGDLTSKIKVD-GEV--DTTKAGTYVLTYTVTDSKGHEVT 76 (103)
T ss_dssp CCCCEE-ECCSE-EEEETTC------CCCHHHHCEEECSSSCBCGGGCEEE-SCC--CSSSCEEEEEEEEEECTTSCEEE
T ss_pred CCCCEE-EeCCC-EEEECCC------CcccccCcEEEcCCCCCcceeEEEe-Ccc--cCCCceEEEEEEEEEcCCCCEEE
Confidence 467887 44655 4443322 23332 6787754321 12222 111 11223999999999999999988
Q ss_pred EEEEEEEecC
Q psy833 566 CEINITVVDE 575 (642)
Q Consensus 566 C~f~v~v~d~ 575 (642)
=..+|+|.+.
T Consensus 77 ~trtVtV~~~ 86 (103)
T 2kpn_A 77 AKQTVTVKVR 86 (103)
T ss_dssp EEEEEEEECS
T ss_pred EEEEEEEeCC
Confidence 7888888664
No 130
>3bn6_A Lactadherin; anticoagulation, anti-coagulation, anticoagulant, anti- coagulant, membrane binding, phosphatidyl-serine binding; 1.67A {Bos taurus} PDB: 2pqs_A
Probab=85.24 E-value=4.2 Score=36.58 Aligned_cols=31 Identities=35% Similarity=0.625 Sum_probs=27.2
Q ss_pred cCccceeeeeEEeeEEEEEeCcccceeeccc
Q psy833 440 TLPKFVQARFVILGIVSYMDNACLKFELMGC 470 (642)
Q Consensus 440 ~~~~~~~~~~~~~~~v~~~C~~~~gf~l~GC 470 (642)
.+..+..+||+..-..++.-..+|.+||.||
T Consensus 128 ~l~~pi~ARyVRi~p~~~~~~~~lR~ElyGC 158 (158)
T 3bn6_A 128 IFETPFQARFVRIQPVAWHNRITLRVELLGC 158 (158)
T ss_dssp EEEEEEEEEEEEEEEEEEESSCEEEEEEEEC
T ss_pred eCCCCEEEEEEEEEEEEcCCeeEEEEEEEcC
Confidence 3456789999999999999999999999998
No 131
>2ahx_A P180ERBB4, receptor tyrosine-protein kinase ERBB-4; X-RAY crystallography, neuregulins, heparin-binding, cell CY signaling protein; HET: NAG NDG; 2.40A {Homo sapiens} PDB: 3u2p_A*
Probab=85.01 E-value=0.27 Score=54.98 Aligned_cols=22 Identities=27% Similarity=0.706 Sum_probs=10.8
Q ss_pred ccccCCCCCeecCC--CCCCcccC
Q psy833 61 ECVPVCGYGTYSPT--GLVPCLEC 82 (642)
Q Consensus 61 ~C~~~C~~G~y~~~--g~~~C~~C 82 (642)
+|...|++|+|... +...|.+|
T Consensus 279 ~Cv~~CP~g~~~~~~~~~~~C~~C 302 (617)
T 2ahx_A 279 SCVRACPSSKMEVEENGIKMCKPC 302 (617)
T ss_dssp EEESSCCTTEEEEEETTEEEEEEC
T ss_pred eeeccCCCCCCccCCCCCceeccC
Confidence 45555666665422 23345554
No 132
>2e4u_A Metabotropic glutamate receptor 3; G-protein-coupled receptor, neuron, central nerve system, SI protein; HET: NAG GLU; 2.35A {Rattus norvegicus} PDB: 2e4v_A* 2e4w_A* 2e4x_A* 2e4y_A*
Probab=83.66 E-value=0.36 Score=53.25 Aligned_cols=52 Identities=15% Similarity=0.384 Sum_probs=27.8
Q ss_pred eeCCCCceecC-CCCccccccccCCCCCeecCCCCCCcccCCCCcccCCCCCCCCCCCC
Q psy833 43 LKCPMGTYTRE-EGSKAVQECVPVCGYGTYSPTGLVPCLECPRNSYTGEPPVGGHKDCE 100 (642)
Q Consensus 43 ~~Cp~g~~~~~-~gs~~~~~C~~~C~~G~y~~~g~~~C~~C~~G~y~~~~p~~g~~~C~ 100 (642)
.+|++|+.+.. .|..-|.+|. .|+.|.++ .....|..||...|.+. ....|.
T Consensus 487 ~~C~pG~rk~~~~g~~CC~~C~-~C~~~~~~-td~~~C~~Cp~~~wpn~----~~~~C~ 539 (555)
T 2e4u_A 487 DPCAPNEMKNMQPGDVCCWICI-PCEPYEYL-VDEFTCMDCGPGQWPTA----DLSGCY 539 (555)
T ss_dssp CCCCTTTEEEECCSSSSCCEEE-ECCTTEEE-EETTEEEECCTTEEECT----TSSSEE
T ss_pred CCCCCCeeeeecCCCeeEEECc-cCCCceec-CCCccceeCCcccCcCC----CcCccc
Confidence 35566655542 2333445555 36666655 34455666666666554 455555
No 133
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=83.16 E-value=2.7 Score=44.55 Aligned_cols=8 Identities=13% Similarity=0.409 Sum_probs=4.1
Q ss_pred EeCCCCee
Q psy833 142 FGCQDTFK 149 (642)
Q Consensus 142 ~~C~~Gy~ 149 (642)
..|.+||.
T Consensus 307 C~C~~G~~ 314 (423)
T 2gy5_A 307 CLCSPGWQ 314 (423)
T ss_dssp EECCTTCB
T ss_pred eECCCCCc
Confidence 45555554
No 134
>2e4u_A Metabotropic glutamate receptor 3; G-protein-coupled receptor, neuron, central nerve system, SI protein; HET: NAG GLU; 2.35A {Rattus norvegicus} PDB: 2e4v_A* 2e4w_A* 2e4x_A* 2e4y_A*
Probab=80.94 E-value=0.75 Score=50.64 Aligned_cols=15 Identities=33% Similarity=0.884 Sum_probs=7.7
Q ss_pred CCCCeecCCCCCCcc
Q psy833 66 CGYGTYSPTGLVPCL 80 (642)
Q Consensus 66 C~~G~y~~~g~~~C~ 80 (642)
|+.+++.+.....|.
T Consensus 525 Cp~~~wpn~~~~~C~ 539 (555)
T 2e4u_A 525 CGPGQWPTADLSGCY 539 (555)
T ss_dssp CCTTEEECTTSSSEE
T ss_pred CCcccCcCCCcCccc
Confidence 555555555444554
No 135
>1yy9_A Epidermal growth factor receptor; cell surface receptor, tyrosine kinase, glycoprotein, antigen:antibody complex, FAB fragment, antitumor, drug; HET: NDG NAG BMA MAN; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 3qwq_A* 1nql_A* 3b2v_A* 1ivo_A* 3njp_A*
Probab=80.23 E-value=1.3 Score=49.48 Aligned_cols=10 Identities=20% Similarity=0.361 Sum_probs=4.5
Q ss_pred ccccCCCCCe
Q psy833 61 ECVPVCGYGT 70 (642)
Q Consensus 61 ~C~~~C~~G~ 70 (642)
.|...|++|+
T Consensus 235 ~Cv~~CP~~~ 244 (624)
T 1yy9_A 235 TCKDTCPPLM 244 (624)
T ss_dssp CEESSCCCSE
T ss_pred cccccCCCcc
Confidence 3444444444
No 136
>1czt_A Protein (coagulation factor V); membrane-binding, discoidin family, calcium- independent, blood clotting; 1.87A {Homo sapiens} SCOP: b.18.1.2 PDB: 1czs_A 1czv_A
Probab=79.80 E-value=8 Score=34.77 Aligned_cols=42 Identities=21% Similarity=0.377 Sum_probs=32.2
Q ss_pred CCCccCccc--ccCccceeeeeEEeeEEEEEeCcccceeecccC
Q psy833 430 PGNYGELAM--ITLPKFVQARFVILGIVSYMDNACLKFELMGCE 471 (642)
Q Consensus 430 ~g~~~~~~~--~~~~~~~~~~~~~~~~v~~~C~~~~gf~l~GC~ 471 (642)
.|+...... ..+..+..+||+..-..++.-..+|.+||.||.
T Consensus 115 ~GN~d~~t~v~~~l~~pi~ARyvRi~p~~w~~~~~~R~ElyGc~ 158 (160)
T 1czt_A 115 EGNTNTKGHVKNFFNPPIISRFIRVIPKTWNQSITLRLELFGCD 158 (160)
T ss_dssp ECCSSSSCCEEEEEEEEEEEEEEEEEEEEEESSCEEEEEEEEEE
T ss_pred cCcCCCCceEEEecCCCEEEEEEEEEEEEeCCceEEEEEEEeEe
Confidence 355544322 235567899999999999999999999999985
No 137
>1n8y_C Protooncoprotein; tyrosin kinase receptor, cell surface receptor, transferase; HET: NAG; 2.40A {Rattus norvegicus} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 1n8z_C* 3be1_A* 1s78_A* 3mzw_A* 3n85_A* 2a91_A* 3h3b_A
Probab=76.28 E-value=1.2 Score=49.52 Aligned_cols=37 Identities=24% Similarity=0.660 Sum_probs=22.3
Q ss_pred CCCCccCCCCeeecCCCCCcc-cCCC-----CceecCCCCCCceeCCCCc
Q psy833 6 VPRCLHCPAGTFAGINQKTCT-PCPR-----GFYQNNDRQGVCLKCPMGT 49 (642)
Q Consensus 6 ~~~C~~C~~G~~~~~~~~~C~-~Cp~-----G~y~~~~~~~~C~~Cp~g~ 49 (642)
...|+.|+. |.. ...|+ .||. ++|.+. ..|.+|.+..
T Consensus 504 ~~~C~~C~~--~~~--~~~Cv~~C~~~~g~~~~~~~~---~~C~~Ch~~C 546 (608)
T 1n8y_C 504 PTQCVNCSH--FLR--GQECVEECRVWKGLPREYVSD---KRCLPCHPEC 546 (608)
T ss_dssp TTCBSSBSS--EEE--TTEEESCCSSSSSSSCEECSS---SBCEECCTTB
T ss_pred ccccccccc--cCc--CCcccccCCCCCCcCcccCCC---Ccccccchhh
Confidence 445667763 222 46786 5887 777543 4688886544
No 138
>2wuh_A Discoidin domain receptor 2; receptor-peptide complex, transferase, nucleotide-binding, tyrosine-protein kinase; 1.60A {Homo sapiens} PDB: 2z4f_A
Probab=76.06 E-value=8.5 Score=35.40 Aligned_cols=83 Identities=20% Similarity=0.263 Sum_probs=47.6
Q ss_pred Eeeceeccccc------ccceeeeeeEeeccccceEEeeccceeccCCCCCccCcccc--cCccceeeeeEEeeEEEEEe
Q psy833 388 LVKGVVTNDIV------GRPTEIRFFYKQAESENFVVYFPNFNLTMRDPGNYGELAMI--TLPKFVQARFVILGIVSYMD 459 (642)
Q Consensus 388 ~~~g~~~~~~~------g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~v~~~C 459 (642)
.|.|+.++... .-++.+++.|-.+. .+|..|...-. .....|+......+ .+..++.+||+..-..++.=
T Consensus 84 ~VtgV~tQG~~~~~~~~~~vt~Y~l~yS~Dg-~~W~~y~~~~~-~kvF~GN~D~~t~v~~~l~~pi~ARyVRi~p~~w~~ 161 (178)
T 2wuh_A 84 FITLVGTQGRHAGGHGIEFAPMYKINYSRDG-TRWISWRNRHG-KQVLDGNSNPYDIFLKDLEPPIVARFVRFIPVTDHS 161 (178)
T ss_dssp EEEEEEEECCCGGGTCCCCCSEEEEEEESSS-SSCEECCCTTS-CCCEECCSSSSSCEEEEEEEEEEEEEEEEEEECSSC
T ss_pred EEeEEEEecccCCCCccceeEEEEEEEEcCC-CcEEEEecCCc-cccccccCCCCceEEEeCCCCeEEEEEEEEEEeecC
Confidence 45566554322 23445555554333 44666542211 01123555544322 34567899999988888775
Q ss_pred -CcccceeecccCC
Q psy833 460 -NACLKFELMGCEE 472 (642)
Q Consensus 460 -~~~~gf~l~GC~~ 472 (642)
..+|.+||.||..
T Consensus 162 ~~i~lRvElyGC~~ 175 (178)
T 2wuh_A 162 MNVCMRVELYGCVW 175 (178)
T ss_dssp BCCCBEEEEEEEEC
T ss_pred CCeEEEEEEecccc
Confidence 3799999999975
No 139
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=76.00 E-value=1.3 Score=51.93 Aligned_cols=11 Identities=9% Similarity=0.226 Sum_probs=9.1
Q ss_pred CceeEEEecCC
Q psy833 594 QDSYVMNFNET 604 (642)
Q Consensus 594 ~~~~~v~w~~p 604 (642)
..+..|+|.+|
T Consensus 806 ~~sv~LsW~~P 816 (897)
T 2dtg_E 806 NNVVHLMWQEP 816 (897)
T ss_dssp SSCCCCCCCCC
T ss_pred CCEEEEEECCC
Confidence 35789999999
No 140
>3i2t_A Epidermal growth factor receptor, isoform A; EGFR, ectodomain, unliganded, autoinhibited, ATP nucleotide-binding, tyrosine-protein kinase; HET: NDG NAG BMA; 2.70A {Drosophila melanogaster} PDB: 3ltf_A* 3ltg_A
Probab=75.72 E-value=2.4 Score=46.41 Aligned_cols=11 Identities=9% Similarity=0.015 Sum_probs=7.2
Q ss_pred EEeCCCCeecc
Q psy833 141 FFGCQDTFKLA 151 (642)
Q Consensus 141 ~~~C~~Gy~l~ 151 (642)
...|+.||+..
T Consensus 285 v~~CP~g~~~~ 295 (551)
T 3i2t_A 285 VRSCPQDKMDK 295 (551)
T ss_dssp ESSCCTTEEES
T ss_pred cccCCCCCccc
Confidence 34588888643
No 141
>2hr7_A Insulin receptor; hormone receptor, leucine rich repeat, transferase; HET: NAG BMA MAN FUC P33; 2.32A {Homo sapiens}
Probab=75.14 E-value=2.2 Score=46.16 Aligned_cols=8 Identities=38% Similarity=0.949 Sum_probs=4.6
Q ss_pred cCCCCccc
Q psy833 81 ECPRNSYT 88 (642)
Q Consensus 81 ~C~~G~y~ 88 (642)
.||.|+|.
T Consensus 240 ~CP~g~y~ 247 (486)
T 2hr7_A 240 TCPPPYYH 247 (486)
T ss_dssp SCCTTCEE
T ss_pred ccCCCeEe
Confidence 56666554
No 142
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=74.10 E-value=2.2 Score=44.38 Aligned_cols=82 Identities=20% Similarity=0.432 Sum_probs=42.0
Q ss_pred ccCCCCeeecCCCCCcccCCCCceecC------CCCCCceeCCCC-ceec--CCC-----CccccccccCCCCCeecCCC
Q psy833 10 LHCPAGTFAGINQKTCTPCPRGFYQNN------DRQGVCLKCPMG-TYTR--EEG-----SKAVQECVPVCGYGTYSPTG 75 (642)
Q Consensus 10 ~~C~~G~~~~~~~~~C~~Cp~G~y~~~------~~~~~C~~Cp~g-~~~~--~~g-----s~~~~~C~~~C~~G~y~~~g 75 (642)
-.|+.|+. +..|..|-.|+|..- .....|.+|.=+ ..+. ... ..+-..|. .|++|+..
T Consensus 274 C~C~~nt~----G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~~~~G~C~-~C~~n~~G--- 345 (375)
T 4aqt_A 274 CNCKHNTY----GVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHGGHCT-NCRDNTDG--- 345 (375)
T ss_dssp ECCCTTEE----STTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHSSCCEEEC-SCTTTEES---
T ss_pred eeCcCCCc----CCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccCCCCCCCC-CCCCCCcC---
Confidence 35777776 458888888888752 123457777521 1100 000 00001232 36676653
Q ss_pred CCCcccCCCCcccCCCCCCCCCCCCCCCC
Q psy833 76 LVPCLECPRNSYTGEPPVGGHKDCEACPA 104 (642)
Q Consensus 76 ~~~C~~C~~G~y~~~~p~~g~~~C~~Cp~ 104 (642)
..|..|..|+|... ....|.+|..
T Consensus 346 -~~Ce~C~~Gyyg~~----~~~~C~pCaA 369 (375)
T 4aqt_A 346 -AKCERCRENFFRLG----NTEACSPAAA 369 (375)
T ss_dssp -TTSCEECSSEECCT----TCSSCEEC--
T ss_pred -CCCCCCCcCcccCc----CCCCCcCCcC
Confidence 35777777777643 2345666654
No 143
>1igr_A Insulin-like growth factor receptor 1; hormone receptor, insulin receptor family; HET: NAG FUC BMA MAN; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1
Probab=68.29 E-value=3.4 Score=44.44 Aligned_cols=12 Identities=33% Similarity=0.725 Sum_probs=5.2
Q ss_pred ccccCCCCCeec
Q psy833 61 ECVPVCGYGTYS 72 (642)
Q Consensus 61 ~C~~~C~~G~y~ 72 (642)
.|...|++||+.
T Consensus 272 ~Cv~~CP~g~~~ 283 (478)
T 1igr_A 272 ECMQECPSGFIR 283 (478)
T ss_dssp EEESSCCTTEEE
T ss_pred eecccCCCCCcc
Confidence 344444444443
No 144
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=66.83 E-value=4.7 Score=42.21 Aligned_cols=33 Identities=33% Similarity=0.797 Sum_probs=21.1
Q ss_pred CccCCCCeeecCCCCCcccCCCCceecC------CCCCCceeCC
Q psy833 9 CLHCPAGTFAGINQKTCTPCPRGFYQNN------DRQGVCLKCP 46 (642)
Q Consensus 9 C~~C~~G~~~~~~~~~C~~Cp~G~y~~~------~~~~~C~~Cp 46 (642)
| .|+.++. +..|..|..|||... .....|.+|+
T Consensus 288 C-~C~hnT~----G~~CErC~pGy~g~p~~~at~~~~~~C~pC~ 326 (403)
T 2y38_A 288 C-ACQHNTC----GGSCDRCCPGFNQQPWKPATTDSANECQSCN 326 (403)
T ss_dssp E-CCCTTEE----SSSCCEECTTCCSSCCCCCCSSCCCCCCCCC
T ss_pred e-ECcCcCc----CCCCCCCCccccCCcccccccCCCccccccc
Confidence 5 4777666 357888888888752 1224577776
No 145
>1igr_A Insulin-like growth factor receptor 1; hormone receptor, insulin receptor family; HET: NAG FUC BMA MAN; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1
Probab=66.82 E-value=3.1 Score=44.74 Aligned_cols=13 Identities=31% Similarity=0.879 Sum_probs=8.2
Q ss_pred Cce-eCCCCceecC
Q psy833 41 VCL-KCPMGTYTRE 53 (642)
Q Consensus 41 ~C~-~Cp~g~~~~~ 53 (642)
.|. .||.|+....
T Consensus 272 ~Cv~~CP~g~~~~~ 285 (478)
T 1igr_A 272 ECMQECPSGFIRNG 285 (478)
T ss_dssp EEESSCCTTEEESS
T ss_pred eecccCCCCCcccC
Confidence 453 6888876544
No 146
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=65.03 E-value=8.3 Score=40.77 Aligned_cols=51 Identities=20% Similarity=0.528 Sum_probs=29.9
Q ss_pred cCCCCceecCCCCCCceeCCCCceecCCCCccccccccCCCCCeecCCCCCCccc-CCCCccc
Q psy833 27 PCPRGFYQNNDRQGVCLKCPMGTYTREEGSKAVQECVPVCGYGTYSPTGLVPCLE-CPRNSYT 88 (642)
Q Consensus 27 ~Cp~G~y~~~~~~~~C~~Cp~g~~~~~~gs~~~~~C~~~C~~G~y~~~g~~~C~~-C~~G~y~ 88 (642)
.|+.|+|.+.... .|.+|..+-.-.. +. ..|. |++||.. ..|.. |+.|.|.
T Consensus 188 ~C~~g~~G~~C~~-~C~~C~~~G~C~~-~~---g~C~--C~~G~~G----~~Ce~~C~~g~~g 239 (423)
T 2gy5_A 188 RCEAQKWGPECNH-LCTACMNNGVCHE-DT---GECI--CPPGFMG----RTCEKACELHTFG 239 (423)
T ss_dssp SSCTTEESTTSCE-ECCCCCTTCEECT-TT---CCEE--CCTTEES----TTSCEECCTTEES
T ss_pred cCCCCCCCCCCCC-CCCCCCCCCEEEC-CC---CcEe--CCCCccC----CCcccccCCCCCC
Confidence 6899998876443 4667776543322 11 2453 7888764 34653 6666553
No 147
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=64.13 E-value=26 Score=38.56 Aligned_cols=134 Identities=22% Similarity=0.266 Sum_probs=75.0
Q ss_pred CCCCCCccCCCCCCCccCCC-cCceecccccCCCCCCCcccccccccceeeeccCC-cccCccce-----eEEe-eEEee
Q psy833 319 PLGLASGRIPDSSINATSES-PYLVRVNACSVPLIPGPRVQELLAEKNVRLFNVLR-TLANMEVY-----VYRL-AILVK 390 (642)
Q Consensus 319 p~~~~~g~~~~~~~~~~~~~-~~y~~~~~~~~~~~~g~~~~~~l~g~~~~~c~~~g-Ws~~~p~c-----v~~~-~~~~~ 390 (642)
+.+..+|.|++..+..-+.. .++ .....|+-...+ |++....= |.=. ...|.
T Consensus 260 ~lgmesg~I~d~~itASS~~~~~~--------------------~p~~aRLn~~~~aW~~~~~~~~qwlqVDl~~~~~it 319 (577)
T 4gz9_A 260 ALGMESGEIHSDQITASSQYGTNW--------------------SVERSRLNYPENGWTPGEDSYKEWIQVDLGLLRFVT 319 (577)
T ss_dssp ECSTTTSSSCGGGEEESCCSCGGG--------------------CGGGCBTTCSSCCBCCSSCCTTCCEEEEEEEEEEEE
T ss_pred cccccCCeecCcccccCCcCcCCC--------------------CcccccccCCCCcccCCCCCCCeEEEEcCCCEEEEE
Confidence 56889999998876544432 222 233334433334 98765322 2111 33455
Q ss_pred ceecccccc-------cceeeeeeEeeccccceEEeeccceeccCCCCCccCcccc--cCccceeeeeEEeeEEEEEeCc
Q psy833 391 GVVTNDIVG-------RPTEIRFFYKQAESENFVVYFPNFNLTMRDPGNYGELAMI--TLPKFVQARFVILGIVSYMDNA 461 (642)
Q Consensus 391 g~~~~~~~g-------~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~v~~~C~~ 461 (642)
|+.++-..+ -++.+++.|... ..+|..|...-. .....|+......+ .++.++.+||+..-.+++.-..
T Consensus 320 ~v~tQG~~~~~~~~~~~v~~y~v~~s~d-g~~w~~y~~~~~-~~vf~GN~d~~~~v~~~l~~pi~aryvRi~p~~~~~~~ 397 (577)
T 4gz9_A 320 AVGTQGAISKETKKKYYVKTYRVDISSN-GEDWISLKEGNK-AIIFQGNTNPTDVVLGVFSKPLITRFVRIKPVSWETGI 397 (577)
T ss_dssp EEEEECEECTTTCCEEEEEEEEEEEESS-SSSCEECBSSSS-BCCEECCSSSSSCEEEEEEEEEEEEEEEEEEEEEESSC
T ss_pred EEEccCCCCCCCCcceeEEEEEEEEEcC-CCcEEEEecCCC-ceEEeCCCCCCcEeEeecCCCcEEEEEEEEeEeccccE
Confidence 666543211 233344444332 234665543211 11124555554433 2456788999999999999999
Q ss_pred ccceeecccCCCC
Q psy833 462 CLKFELMGCEEPK 474 (642)
Q Consensus 462 ~~gf~l~GC~~~g 474 (642)
+|.+||.||....
T Consensus 398 ~mR~El~Gc~~~~ 410 (577)
T 4gz9_A 398 SMRFEVYGCKITD 410 (577)
T ss_dssp CBEEEEEEECGGG
T ss_pred EEEEEeccccccc
Confidence 9999999997643
No 148
>2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens}
Probab=61.31 E-value=32 Score=34.59 Aligned_cols=33 Identities=27% Similarity=0.500 Sum_probs=28.6
Q ss_pred CccceeeeeEEeeEEEEEeCcccceeecccCCC
Q psy833 441 LPKFVQARFVILGIVSYMDNACLKFELMGCEEP 473 (642)
Q Consensus 441 ~~~~~~~~~~~~~~v~~~C~~~~gf~l~GC~~~ 473 (642)
+..+..+||+.....++.-..+|.+||.||...
T Consensus 128 l~~pi~aRyvRi~p~~~~~~~~~R~ElyGc~~~ 160 (325)
T 2qqj_A 128 LHAPLLTRFVRIRPQTWHSGIALRLELFGCRVT 160 (325)
T ss_dssp EEEEEEEEEEEEEEEEEESSCCBEEEEEEECGG
T ss_pred cCCceEEEEEeecCccccccceeeeeeeeeeec
Confidence 456788999999999999899999999999754
No 149
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=59.30 E-value=5.3 Score=41.82 Aligned_cols=82 Identities=23% Similarity=0.543 Sum_probs=47.0
Q ss_pred CCcccCCCCceecCCCCCCceeCCCCceecCC------CCccccccccCCCCCee-c------------------CCCCC
Q psy833 23 KTCTPCPRGFYQNNDRQGVCLKCPMGTYTREE------GSKAVQECVPVCGYGTY-S------------------PTGLV 77 (642)
Q Consensus 23 ~~C~~Cp~G~y~~~~~~~~C~~Cp~g~~~~~~------gs~~~~~C~~~C~~G~y-~------------------~~g~~ 77 (642)
..| .|..+|.... |..|.+|+|...- ....|..|. |..... . ..+..
T Consensus 286 g~C-~C~hnT~G~~-----CErC~pGy~g~p~~~at~~~~~~C~pC~--Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G 357 (403)
T 2y38_A 286 LQC-ACQHNTCGGS-----CDRCCPGFNQQPWKPATTDSANECQSCN--CHGHAYDCYYDPEVDRREASQNQDNVYQGGG 357 (403)
T ss_dssp EEE-CCCTTEESSS-----CCEECTTCCSSCCCCCCSSCCCCCCCCC--CTTSCSCEEECHHHHHTTCCCCTTSCSCCCE
T ss_pred eEe-ECcCcCcCCC-----CCCCCccccCCcccccccCCCccccccc--cCCCCcccccCcccccccccccccccCCCCC
Confidence 457 7888887776 7788888875421 112344442 432110 0 01234
Q ss_pred CcccCCCCcccCCCCCCCCCCCCCCCCceeeccCCC-CCCCCCC
Q psy833 78 PCLECPRNSYTGEPPVGGHKDCEACPANMFTYQPAA-PARNFCR 120 (642)
Q Consensus 78 ~C~~C~~G~y~~~~p~~g~~~C~~Cp~G~~~~~~~~-~s~~~C~ 120 (642)
.|..|..++.- . .|..|..|||...... .+...|.
T Consensus 358 ~C~~C~~nt~G-~-------~CErC~~GYyg~p~~~~~~~~~C~ 393 (403)
T 2y38_A 358 VCLDCQHHTTG-I-------NCERCLPGFFRAPDQPLDSPHVCR 393 (403)
T ss_dssp EESSCCSSEES-T-------TSCEECTTCEECTTSCTTSTTSEE
T ss_pred CCCCCcCcCcC-C-------CCCcCCCCccCCCCCCCCCCCccc
Confidence 68778877543 3 4877888888765543 3455676
No 150
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=59.02 E-value=7.3 Score=42.44 Aligned_cols=24 Identities=29% Similarity=0.769 Sum_probs=12.6
Q ss_pred CCcccCCCCceecCC-CCCCceeCC
Q psy833 23 KTCTPCPRGFYQNND-RQGVCLKCP 46 (642)
Q Consensus 23 ~~C~~Cp~G~y~~~~-~~~~C~~Cp 46 (642)
..|..|+.|+|.... ....|.+|+
T Consensus 418 ~~C~~C~~Gy~G~~c~~~~~C~~C~ 442 (525)
T 4aqs_A 418 ERCDVCKEGFYDLSAEDPYGCKSCA 442 (525)
T ss_dssp TTTCEECTTEECCCTTSTTSSEECC
T ss_pred CcccCCCCCCcCCCCCCCCCCccCC
Confidence 456666666665432 223466554
No 151
>4ag4_A Epithelial discoidin domain-containing receptor 1; immune system-transferase complex; HET: NAG; 2.80A {Homo sapiens}
Probab=56.71 E-value=32 Score=35.16 Aligned_cols=133 Identities=24% Similarity=0.215 Sum_probs=73.3
Q ss_pred CCCCCCccCCCCCCCccCCC-cCceecccccCCCCCCCcccccccccceeeec---cCCcccCcc------ce--eEEe-
Q psy833 319 PLGLASGRIPDSSINATSES-PYLVRVNACSVPLIPGPRVQELLAEKNVRLFN---VLRTLANME------VY--VYRL- 385 (642)
Q Consensus 319 p~~~~~g~~~~~~~~~~~~~-~~y~~~~~~~~~~~~g~~~~~~l~g~~~~~c~---~~gWs~~~p------~c--v~~~- 385 (642)
|.|+.+|.||+..+..-+-. +.+ .....|+-. .++|++... .- |.-.
T Consensus 9 pLGMesG~IpDsqITASS~~~~~~--------------------~p~~ARLn~~~~~gaW~a~~~~~~d~~qWLQVDLg~ 68 (351)
T 4ag4_A 9 ALGMQDRTIPDSDISASSSWSDST--------------------AARHSRLESSDGDGAWCPAGSVFPKEEEYLQVDLQR 68 (351)
T ss_dssp ECSTTTSCSCGGGEEESCCSSGGG--------------------CGGGCBTTCCTTTSSBCCSSCCCSSCCCCEEEEEEE
T ss_pred cccccCCCcChHheEEeCcCCCcc--------------------ChhhhhcccCCCCccccccccccCCCCCEEEecCCC
Confidence 67899999998876443321 122 111122222 233987542 23 2221
Q ss_pred eEEeeceecccc------cccceeeeeeEeeccccceEEeeccceeccCCCCCccCcccc--cCccceeeeeEEeeEEEE
Q psy833 386 AILVKGVVTNDI------VGRPTEIRFFYKQAESENFVVYFPNFNLTMRDPGNYGELAMI--TLPKFVQARFVILGIVSY 457 (642)
Q Consensus 386 ~~~~~g~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~v~~ 457 (642)
...|.|+.++.. ..-++.+++.|-.+ ..+|..|...-. .....|+......+ .+.+++.+||+..-..++
T Consensus 69 ~~~VtgV~TQGr~~~g~~~~wVtsY~l~yS~D-G~~W~~y~d~~~-~kvF~GN~D~~t~v~n~l~~PI~ARyVRi~P~~w 146 (351)
T 4ag4_A 69 LHLVALVGTQGRHAGGLGKEFSRSYRLRYSRD-GRRWMGWKDRWG-QEVISGNEDPEGVVLKDLGPPMVARLVRFYPRAD 146 (351)
T ss_dssp EEEEEEEEEECBCGGGTCCBCCSEEEEEEESS-SSCEEECCCTTS-CCCEECCSSSSCCEEEEEEEEEEEEEEEEEEECS
T ss_pred eEEEEEEEEecccCCCCccceEEEEEEEEEeC-CCcEEEEECCCc-cccccccCCCCceEEEeCCCCcEEEEEEEEEEEc
Confidence 334556654432 22345555555443 245666643211 11224666554433 356778999999888887
Q ss_pred -EeCcccceeecccCCC
Q psy833 458 -MDNACLKFELMGCEEP 473 (642)
Q Consensus 458 -~C~~~~gf~l~GC~~~ 473 (642)
.-..+|.+||.||...
T Consensus 147 ~~~~i~LRvELyGC~~~ 163 (351)
T 4ag4_A 147 RVMSVCLRVELYGCLWR 163 (351)
T ss_dssp SSCCCCBEEEEEEEECC
T ss_pred cCCceEEEEEEeccccc
Confidence 3678999999999753
No 152
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=56.63 E-value=16 Score=40.53 Aligned_cols=16 Identities=19% Similarity=0.341 Sum_probs=11.5
Q ss_pred eeEEeCCCCeeccCCc
Q psy833 139 SFFFGCQDTFKLAGQT 154 (642)
Q Consensus 139 ~~~~~C~~Gy~l~g~~ 154 (642)
.|...|.+||.-.|..
T Consensus 128 sY~C~C~~Gy~GdG~~ 143 (634)
T 1yo8_A 128 MYKCECQTGYAGDGLI 143 (634)
T ss_dssp SEEEEECTTEEESSSS
T ss_pred ceeeeccCCccccCcc
Confidence 4578999999854443
No 153
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=54.42 E-value=13 Score=32.52 Aligned_cols=15 Identities=20% Similarity=0.344 Sum_probs=11.3
Q ss_pred eeEEeCCCCeeccCC
Q psy833 139 SFFFGCQDTFKLAGQ 153 (642)
Q Consensus 139 ~~~~~C~~Gy~l~g~ 153 (642)
.|...|.+||.+...
T Consensus 118 ~y~C~C~~Gy~g~~~ 132 (143)
T 2bou_A 118 SYSCRCRPGWKPRHG 132 (143)
T ss_dssp CEEEECCSSSCBCTT
T ss_pred CEEeeCCCCcccCCC
Confidence 447889999987543
No 154
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=53.58 E-value=5.9 Score=44.06 Aligned_cols=14 Identities=21% Similarity=0.394 Sum_probs=9.9
Q ss_pred CCCCCCCCCCceeec
Q psy833 95 GHKDCEACPANMFTY 109 (642)
Q Consensus 95 g~~~C~~Cp~G~~~~ 109 (642)
+...|. |+.||...
T Consensus 127 GsY~C~-C~~Gy~Gd 140 (634)
T 1yo8_A 127 PMYKCE-CQTGYAGD 140 (634)
T ss_dssp SSEEEE-ECTTEEES
T ss_pred cceeee-ccCCcccc
Confidence 566786 88888653
No 155
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=49.66 E-value=9.2 Score=30.03 Aligned_cols=54 Identities=20% Similarity=0.372 Sum_probs=26.9
Q ss_pred CCCCCCCCCCceeeccCCCCCCCCCCCCCCCCCccceecCCCCeeeEEeCCCCeeccC
Q psy833 95 GHKDCEACPANMFTYQPAAPARNFCRVPTPGAEYGNFLDTRYQSSFFFGCQDTFKLAG 152 (642)
Q Consensus 95 g~~~C~~Cp~G~~~~~~~~~s~~~C~~~~~~p~nG~~~~~~~~~~~~~~C~~Gy~l~g 152 (642)
+...|. |+.||......+.+...|... ..-.||. +.+..-.|...|.+||.+.+
T Consensus 24 g~y~C~-C~~Gy~~~g~~C~dideC~~~-~~C~~~~--C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 24 GSYRCE-CPFGYILAGNECVDTDECSVG-NPCGNGT--CKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp SCCCEE-CCTTEEEETTEEEECCGGGTC-CTTSSSC--EEECSSSEEECCSSSSCCCS
T ss_pred CCEEEE-CCCCeECCCCccCCcccccCC-CCCCCCE--eECCCCCEEeECCCCeEeCC
Confidence 344564 666665433333333445421 1122442 33233345788999998654
No 156
>2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A
Probab=47.39 E-value=69 Score=32.03 Aligned_cols=33 Identities=27% Similarity=0.597 Sum_probs=28.2
Q ss_pred CccceeeeeEEeeEEEEEeCcccceeecccCCC
Q psy833 441 LPKFVQARFVILGIVSYMDNACLKFELMGCEEP 473 (642)
Q Consensus 441 ~~~~~~~~~~~~~~v~~~C~~~~gf~l~GC~~~ 473 (642)
+..+..+||+..-..++.-..+|.|+|.||...
T Consensus 127 l~~pi~aRyVRi~p~~~~~~~~lr~ElyGc~~~ 159 (318)
T 2qqi_A 127 FPKPLITRFVRIKPATWETGISMRFEVYGCKIT 159 (318)
T ss_dssp EEEEEEEEEEEEEEEEEESSCCBEEEEEEECGG
T ss_pred cCCCeeEEEEEEEEeeccceeEEEEEecccccc
Confidence 445688999999999999899999999999753
No 157
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=46.69 E-value=25 Score=31.74 Aligned_cols=10 Identities=10% Similarity=0.674 Sum_probs=7.6
Q ss_pred eEEeCCCCee
Q psy833 140 FFFGCQDTFK 149 (642)
Q Consensus 140 ~~~~C~~Gy~ 149 (642)
+...|.+||.
T Consensus 154 ~~C~C~~G~~ 163 (169)
T 2vj2_A 154 YQCSCPEGYS 163 (169)
T ss_dssp EEEECCTTCC
T ss_pred cEeECCCCCc
Confidence 4678888886
No 158
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=46.14 E-value=8 Score=40.72 Aligned_cols=10 Identities=20% Similarity=0.906 Sum_probs=5.3
Q ss_pred CcccCCCCce
Q psy833 24 TCTPCPRGFY 33 (642)
Q Consensus 24 ~C~~Cp~G~y 33 (642)
.|..|..|+|
T Consensus 325 ~CE~C~pgy~ 334 (426)
T 3zyj_B 325 DCGKCKKNYQ 334 (426)
T ss_dssp SSCEECTTCC
T ss_pred Cccccccccc
Confidence 5555555554
No 159
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=46.06 E-value=22 Score=27.99 Aligned_cols=12 Identities=25% Similarity=0.800 Sum_probs=6.9
Q ss_pred CCCcccCCCCcee
Q psy833 22 QKTCTPCPRGFYQ 34 (642)
Q Consensus 22 ~~~C~~Cp~G~y~ 34 (642)
...| .|+.|+..
T Consensus 24 ~y~C-~C~~Gy~~ 35 (86)
T 1lmj_A 24 DFEC-KCDEGYES 35 (86)
T ss_dssp EEEE-CCCSSEEE
T ss_pred CEEe-eCCCCcCc
Confidence 4556 56666654
No 160
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=44.12 E-value=10 Score=44.31 Aligned_cols=67 Identities=21% Similarity=0.534 Sum_probs=42.8
Q ss_pred CccCCCCeeecCCCCCcc-cCCCCceecCCCC----CCceeCCC-----------CceecCCCCccccccccCCCCCeec
Q psy833 9 CLHCPAGTFAGINQKTCT-PCPRGFYQNNDRQ----GVCLKCPM-----------GTYTREEGSKAVQECVPVCGYGTYS 72 (642)
Q Consensus 9 C~~C~~G~~~~~~~~~C~-~Cp~G~y~~~~~~----~~C~~Cp~-----------g~~~~~~gs~~~~~C~~~C~~G~y~ 72 (642)
|+.|..-.+ .+.|+ .||.|+|...... ..|..|.. .+.. .-..|...|+.||+.
T Consensus 225 C~~C~~~~~----~~~Cv~~Cp~~~y~~~~~~C~~~~~C~~~~~~c~~~~~~~c~~~~~------~~~~Cv~~CP~g~~~ 294 (897)
T 2dtg_E 225 CVACRNFYL----DGRCVETCPPPYYHFQDWRCVNFSFCQDLHHKCKNSRRQGCHQYVI------HNNKCIPECPSGYTM 294 (897)
T ss_dssp EECCSSCBB----TTBCCSSCCSSCCCCTTSBCCCHHHHHHHSSCCCSTTTTSCCCCEE------ETTEEESSCCSSCEE
T ss_pred eeECccCcc----CCcchhhcCCceeEecCcEEcChhHhhccCccccCCCcccccceee------ECCEEccCCCCCccc
Confidence 899975333 46997 5999999864111 12433322 2211 124899999999998
Q ss_pred CCCCCCcccCCCC
Q psy833 73 PTGLVPCLECPRN 85 (642)
Q Consensus 73 ~~g~~~C~~C~~G 85 (642)
......|.+|...
T Consensus 295 ~~~~~~C~~C~~~ 307 (897)
T 2dtg_E 295 NSSNLLCTPCLGP 307 (897)
T ss_dssp CSSSCBEECCCSS
T ss_pred cCCCCeeccCCCC
Confidence 7544679988653
No 161
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=43.57 E-value=20 Score=38.95 Aligned_cols=12 Identities=25% Similarity=0.584 Sum_probs=7.6
Q ss_pred EEeCCCCeeccCCc
Q psy833 141 FFGCQDTFKLAGQT 154 (642)
Q Consensus 141 ~~~C~~Gy~l~g~~ 154 (642)
...|.+||. |..
T Consensus 461 ~C~C~~g~~--G~~ 472 (525)
T 4aqs_A 461 YCYCKRLVT--GQR 472 (525)
T ss_dssp CBCBCTTCC--STT
T ss_pred EEECCCCCc--CCC
Confidence 356888875 554
No 162
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=42.75 E-value=33 Score=34.61 Aligned_cols=48 Identities=21% Similarity=0.350 Sum_probs=33.6
Q ss_pred cCCCCCCCCCcEEEccC-CccccccCCCCCEEEEEccCCCeEEeCC--------CceeeCC
Q psy833 259 VCSDPGRPVDGYQVATS-YEQVRYDDEQGSEVQFGCNKPGYILINP--------RPITCVR 310 (642)
Q Consensus 259 ~C~~p~~~~~g~~~~~~-~~~~~~~~~~gs~~~~~C~~~Gy~l~G~--------~~~~C~~ 310 (642)
.|+.|..+.||.+.... -.... ++++++|+|+.+-|.|.+. ...+|..
T Consensus 1 ~c~~p~~~~~g~~~~~~~~~~~~----~~~~~~y~c~~~~~~~~~~~~~~~~~~~~~~C~~ 57 (329)
T 1md8_A 1 DCGQPRNLPNGDFRYTTTMGVNT----YKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTA 57 (329)
T ss_dssp CCCSCCCCTTEEEEESSSTTCCS----TTCEEEEEECTTTEEECC--------CCEEEECT
T ss_pred CCCCCCCcCCCceeeecCCCCcc----cceEEEeecCCcceEeeccCCccccCCCceEECC
Confidence 48899999999877421 11111 8999999998344677765 5678886
No 163
>2xtt_A Protease inhibitor SGPI-1; hydrolase, catalytic mechanism, inhibition, in vitro evoluti; 0.93A {Schistocerca gregaria} PDB: 1kj0_A 2f91_B 2vu8_I 1kio_A
Probab=42.23 E-value=17 Score=23.92 Aligned_cols=31 Identities=26% Similarity=0.726 Sum_probs=22.2
Q ss_pred eCCCCeeccCCcCCCCceEecccCCeeecCCCCccCCcCC
Q psy833 143 GCQDTFKLAGQTDKNDNVVRCQANGIWDFGDLRCEGPVCS 182 (642)
Q Consensus 143 ~C~~Gy~l~g~~~~~~~~~~C~~~G~Ws~~~p~C~~~~C~ 182 (642)
.|.+|..+...= ++=+|..+|.|. |....|+
T Consensus 3 ~C~pG~~~~~dC----NtC~C~~~G~W~-----CT~~~Cp 33 (36)
T 2xtt_A 3 ECEPGQTKKQDC----NTCRCGSDGVWA-----CTRMGCP 33 (36)
T ss_dssp CSCTTCEEEETT----EEEEECTTSCEE-----EECCCCC
T ss_pred cCCCCCEEECCC----CccCCCCCCEEe-----eeCCcCC
Confidence 478887765443 378898899997 6666665
No 164
>2wn3_A Discoidin-1 subunit A; type-H lectin, cell adhesion, discoidin domain, lectin; HET: NGA GAL 1PG; 1.59A {Dictyostelium discoideum} PDB: 2w94_A* 2wn2_A* 2w95_A*
Probab=41.68 E-value=58 Score=31.57 Aligned_cols=81 Identities=11% Similarity=0.093 Sum_probs=50.5
Q ss_pred eeceecccc---cccceeeeeeEeeccccceEEeeccceeccCCCCCccCcccc--cCccceeeeeEEeeEEEEEeCccc
Q psy833 389 VKGVVTNDI---VGRPTEIRFFYKQAESENFVVYFPNFNLTMRDPGNYGELAMI--TLPKFVQARFVILGIVSYMDNACL 463 (642)
Q Consensus 389 ~~g~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~v~~~C~~~~ 463 (642)
|.|+.++.. ...++.+++.|-.. ..+|..|... ....|+......+ .+..++.+||+..-..++.-+.+|
T Consensus 72 VtgV~tQG~~~~~~~VtsY~l~yS~d-g~~W~~y~~~----~vF~GN~d~~t~v~~~l~~pi~ARyvRi~P~~w~~~i~l 146 (254)
T 2wn3_A 72 FMCVALQGRGDADQWVTSYKIRYSLD-NVSWFEYRNG----AAVTGVTDRNTVVNHFFDTPIRARSIAIHPLTWNGHISL 146 (254)
T ss_dssp EEEEEEECCSSSSCEEEEEEEEEESS-SSSCEEGGGG----CCEECCSSSSCCEEEEEEEEEEEEEEEEEEEEEESSCEE
T ss_pred EEEEEEeCCCCCCCceEEEEEEEECC-CCcEEEecCC----cEEeccCCCCeeEEEecCCCcEEEEEEEEEEEecCccEE
Confidence 445554422 23344555555433 2346665422 1224666554433 355678999999999999999999
Q ss_pred ceeecccCCCC
Q psy833 464 KFELMGCEEPK 474 (642)
Q Consensus 464 gf~l~GC~~~g 474 (642)
.+||.||....
T Consensus 147 R~El~Gc~~~~ 157 (254)
T 2wn3_A 147 RCEFYTQPVQS 157 (254)
T ss_dssp EEEEEECCCCC
T ss_pred EEEeccCCccc
Confidence 99999997643
No 165
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=41.10 E-value=65 Score=26.24 Aligned_cols=28 Identities=25% Similarity=0.292 Sum_probs=23.1
Q ss_pred cceEEEEEEEeCCCCEE-EEEEEEEEecC
Q psy833 548 HDMAVKYIAYDFDGNVA-ICEINITVVDE 575 (642)
Q Consensus 548 G~~~Vtyta~D~~Gn~a-~C~f~v~v~d~ 575 (642)
|.++|+-.|+|.+||.. +=.+.|+|...
T Consensus 61 G~htl~a~AtD~~G~~~tS~~v~vtV~~~ 89 (98)
T 3pe9_A 61 GNHEISVIAYDDDDAASTPDSVKIFVKQA 89 (98)
T ss_dssp EEEEEEEEEEETTCCBCCCEEEEEEEECC
T ss_pred ccEEEEEEEEECCCCEEeeeEEEEEECch
Confidence 99999999999999975 56677777543
No 166
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=40.15 E-value=23 Score=36.59 Aligned_cols=69 Identities=25% Similarity=0.450 Sum_probs=36.3
Q ss_pred cCCCCceecCCCCCCceeCCCCceecCC------CCccccccccCCCCCee----------cCCCCCCcccCCCCcccCC
Q psy833 27 PCPRGFYQNNDRQGVCLKCPMGTYTREE------GSKAVQECVPVCGYGTY----------SPTGLVPCLECPRNSYTGE 90 (642)
Q Consensus 27 ~Cp~G~y~~~~~~~~C~~Cp~g~~~~~~------gs~~~~~C~~~C~~G~y----------~~~g~~~C~~C~~G~y~~~ 90 (642)
.|+.|+.... |..|-+|++...- ....|..| .|..... .......|..|..|+ .
T Consensus 275 ~C~~nt~G~~-----Ce~C~~gy~~~p~~~g~~~~~~~C~~C--~Cn~~g~~C~~d~~~~~c~~~~G~C~~C~~n~-~-- 344 (375)
T 4aqt_A 275 NCKHNTYGVD-----CEKCLPFFNDRPWRRATAESASECLPC--DCNGRSQECYFDPELYRSTGHGGHCTNCRDNT-D-- 344 (375)
T ss_dssp CCCTTEESTT-----SCEECTTCCSSCCCCCCSSCCCCCCCC--CGGGSCSCEEECHHHHHHSSCCEEECSCTTTE-E--
T ss_pred eCcCCCcCCC-----cccCCCCCcCCCCCCCccCCCCCCCCC--cCcCCCCCcccccccCccCCCCCCCCCCCCCC-c--
Confidence 6777775443 8888888775421 11123333 2322110 011123466677663 2
Q ss_pred CCCCCCCCCCCCCCceeecc
Q psy833 91 PPVGGHKDCEACPANMFTYQ 110 (642)
Q Consensus 91 ~p~~g~~~C~~Cp~G~~~~~ 110 (642)
...|..|..|||...
T Consensus 345 -----G~~Ce~C~~Gyyg~~ 359 (375)
T 4aqt_A 345 -----GAKCERCRENFFRLG 359 (375)
T ss_dssp -----STTSCEECSSEECCT
T ss_pred -----CCCCCCCCcCcccCc
Confidence 236888999988643
No 167
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=39.95 E-value=18 Score=39.53 Aligned_cols=83 Identities=20% Similarity=0.425 Sum_probs=42.4
Q ss_pred eecCCCCCCceeCCCCceecCCCCccccccccCCCCCeecCCCCCCcccCCCCcccCCCCCCCCCCCC----CCCCceee
Q psy833 33 YQNNDRQGVCLKCPMGTYTREEGSKAVQECVPVCGYGTYSPTGLVPCLECPRNSYTGEPPVGGHKDCE----ACPANMFT 108 (642)
Q Consensus 33 y~~~~~~~~C~~Cp~g~~~~~~gs~~~~~C~~~C~~G~y~~~g~~~C~~C~~G~y~~~~p~~g~~~C~----~Cp~G~~~ 108 (642)
|..+.....|.+|+.|......| ++|...|++|++. ..|+.+... ..|..|.|.++ .|..|...
T Consensus 442 Yl~e~~~c~C~pC~~~~~~~~~g----t~C~c~C~~g~~G-------~~c~~~~~~-~~pv~G~Ws~Ws~Ws~Cs~G~~~ 509 (537)
T 3ojy_B 442 FQKEVSSCHCAPCQGNGVPVLKG----SRCDCICPVGSQG-------LACEVSYRK-NTPIDGKWNCWSNWSSCSGRRKT 509 (537)
T ss_dssp HHHHTCGGGSCCCSTTCEEEEET----TEEEEECCTTEET-------GGGCEESSS-SCCCCCCCCCCCCCCCSSSEEEE
T ss_pred HHHHhCcccCCCCCcCCEEecCC----CceeccCCCCccc-------ccccCCccc-cCccCCCCCCCCCCCCcCCCcee
Confidence 44444566788999886555544 3777789998654 123332221 11344555554 45544332
Q ss_pred ccCCCCCCCCCCCCCCCCCccceecCC
Q psy833 109 YQPAAPARNFCRVPTPGAEYGNFLDTR 135 (642)
Q Consensus 109 ~~~~~~s~~~C~~~~~~p~nG~~~~~~ 135 (642)
. ...|.. +.|.||...|..
T Consensus 510 R------~R~C~~--p~P~~gG~~C~G 528 (537)
T 3ojy_B 510 R------QRQCNN--PPPQNGGSPCSG 528 (537)
T ss_dssp C------CTTTTC--CSSCC-----CC
T ss_pred c------ccccCC--CCCCCCCCcCCC
Confidence 2 345652 456777766653
No 168
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=38.58 E-value=11 Score=42.28 Aligned_cols=10 Identities=20% Similarity=0.670 Sum_probs=6.9
Q ss_pred CCCCCCCceee
Q psy833 98 DCEACPANMFT 108 (642)
Q Consensus 98 ~C~~Cp~G~~~ 108 (642)
.|. |+.||+.
T Consensus 539 ~C~-C~~G~~G 548 (687)
T 3k6s_B 539 KCR-CHPGFEG 548 (687)
T ss_dssp EEE-ECTTCCS
T ss_pred EEE-cCCCCcC
Confidence 566 8888763
No 169
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=36.41 E-value=58 Score=29.97 Aligned_cols=60 Identities=22% Similarity=0.285 Sum_probs=35.9
Q ss_pred eeeEEEcCCceecCCCceeEEEEccCC------CCCCce-----eecceEEEEEEEeCCCCEE-EEEEEEEEecC
Q psy833 513 IEPVNITEPVAVDNSGSIARLEIKPQS------FKTPMI-----TFHDMAVKYIAYDFDGNVA-ICEINITVVDE 575 (642)
Q Consensus 513 ~~~v~~~~p~~~dnsg~~~~~~~~~~~------~~~~~~-----~~G~~~Vtyta~D~~Gn~a-~C~f~v~v~d~ 575 (642)
.+.+.| .+.|+.|.+..+++.-.+ ...|+. .-|.+.|+..|+|.+||.+ .=.+.|+|.+.
T Consensus 110 ~vtl~~---~AsD~~g~V~~Ve~~~dg~~v~t~t~~~y~~~~~~~~G~~tl~a~A~D~aGn~s~s~~vtvtv~~~ 181 (190)
T 3pdd_A 110 FLKITA---TASDSDGKISRVDFLVDGEVIGSDREAPYEYEWKAVEGNHEISVIAYDDDDAASTPDSVKIFVKQA 181 (190)
T ss_dssp EEEEEE---EEECSSSCEEEEEEEETTEEEEEECSSSEEEEEECCSEEEEEEEEEEETTCCBCCCEEEEEEEBCG
T ss_pred eEEEEE---EEECCCCcEEEEEEEECCEEEecccCCCEEEEEecCCeeEEEEEEEEECCCCEEecceEEEEECCc
Confidence 344454 577888766555432111 011221 1299999999999999975 44566666443
No 170
>4ers_A GL-R, glucagon receptor; class-B GPCR, FAB, glycosylation, extra-C immune system; HET: NAG; 2.64A {Homo sapiens}
Probab=33.02 E-value=39 Score=27.58 Aligned_cols=34 Identities=21% Similarity=0.294 Sum_probs=24.1
Q ss_pred ccccCcEEEEEccc---Ccc--ccCCccCCCceEEeccCCeecC
Q psy833 212 DTRYQSSFFFGCQD---TFK--LAGQTDKNDNVVRCQANGIWDF 250 (642)
Q Consensus 212 ~~~~gs~~~~~C~~---Gy~--l~G~~~~~~~~~~C~~~G~Ws~ 250 (642)
....|+++...|.. ||. ..|.. .+.|.++|+|..
T Consensus 43 ~t~~G~~v~~~CP~~~~~~~~~~~~~a-----~R~C~~~G~W~~ 81 (96)
T 4ers_A 43 DTPANTTANISCPWYLPWHHKVQHRFV-----FKRCGPDGQWVR 81 (96)
T ss_dssp CEETTEEEEEECCTTSTTTTTSTTCEE-----EEEECTTSCBCB
T ss_pred CCCCCCEEECCCChhhCcCccCCccce-----eeecCCCCeEeC
Confidence 36788899999975 332 23444 479999999963
No 171
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.68 E-value=73 Score=25.97 Aligned_cols=31 Identities=16% Similarity=0.184 Sum_probs=26.8
Q ss_pred cceEEEEEEEeCCCCEEEEEEEEEEecCCCC
Q psy833 548 HDMAVKYIAYDFDGNVAICEINITVVDETPP 578 (642)
Q Consensus 548 G~~~Vtyta~D~~Gn~a~C~f~v~v~d~~pP 578 (642)
|...++-+++|..|.+++=++.|+|.....|
T Consensus 69 G~y~f~LTVtD~~G~s~s~~v~VtV~~~~~~ 99 (102)
T 2yrl_A 69 GTYVFTLTVKDERNLQSQSSVNVIVKEESGP 99 (102)
T ss_dssp SEEEEEEEEEBTTCCEEEEEEEEEEECCSSC
T ss_pred eEEEEEEEEEeCCCCEEEeEEEEEEcCCCCC
Confidence 8889999999999999998999988766544
No 172
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=30.25 E-value=1.2e+02 Score=30.55 Aligned_cols=54 Identities=28% Similarity=0.705 Sum_probs=25.3
Q ss_pred cCCCCeeecCCCCCcccCCCCceecCCCCCCce-eCCCCceecCCCCccccccccCCCCCeecC
Q psy833 11 HCPAGTFAGINQKTCTPCPRGFYQNNDRQGVCL-KCPMGTYTREEGSKAVQECVPVCGYGTYSP 73 (642)
Q Consensus 11 ~C~~G~~~~~~~~~C~~Cp~G~y~~~~~~~~C~-~Cp~g~~~~~~gs~~~~~C~~~C~~G~y~~ 73 (642)
.|..+-.... ...| .|+.|++........|. .|..+-.-... ..| .|++||...
T Consensus 154 ~C~~~G~C~~-~~~C-~C~~G~~G~~C~~~~C~~~C~~~G~C~~~-----~~C--~C~~G~~G~ 208 (324)
T 2ygq_A 154 GCRNGGFCNE-RRIC-ECPDGFHGPHCEKALCTPRCMNGGLCVTP-----GFC--ICPPGFYGV 208 (324)
T ss_dssp CCCSSCEECT-TSCE-ECCTTEESSSSCEESSSSCCCTTCEECSS-----CCE--ECCTTCBTT
T ss_pred CCCCCCEECC-CCeE-ECCCCCcCCCCCCCCCCCCCCCCCEEcCC-----CEE--eCCCCccCC
Confidence 3444333332 3566 78888876543222231 23332211111 234 488888754
No 173
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=29.77 E-value=19 Score=37.82 Aligned_cols=22 Identities=27% Similarity=0.555 Sum_probs=11.1
Q ss_pred CCcccCCCCceecCCCCCCceeCCCCce
Q psy833 23 KTCTPCPRGFYQNNDRQGVCLKCPMGTY 50 (642)
Q Consensus 23 ~~C~~Cp~G~y~~~~~~~~C~~Cp~g~~ 50 (642)
..|. |+.|+-... |..|.+|++
T Consensus 313 ~~C~-C~~~ttG~~-----CE~C~pgy~ 334 (426)
T 3zyj_B 313 LTCE-CEHNTTGPD-----CGKCKKNYQ 334 (426)
T ss_dssp EEEC-CCTTEESSS-----SCEECTTCC
T ss_pred ceee-CCCCCcCCC-----ccccccccc
Confidence 4553 555555554 444544443
No 174
>3qc5_X Platelet binding protein GSPB; carbohydrate/sugar binding, sugar binding protein; HET: GOL; 1.40A {Streptococcus gordonii} PDB: 3qc6_X 4i8e_X* 3qd1_X*
Probab=29.20 E-value=1.1e+02 Score=30.67 Aligned_cols=35 Identities=34% Similarity=0.506 Sum_probs=21.8
Q ss_pred CcCCCCCeeecCCCCceEEEeCCCCeeeEEEcCCceecCCCc
Q psy833 488 CVDNEPPVFQNCPQQPIIVRKGPNGIEPVNITEPVAVDNSGS 529 (642)
Q Consensus 488 C~d~~pP~~~~CP~~~i~~~~~~~~~~~v~~~~p~~~dnsg~ 529 (642)
-.|.+||.| .=|.. +.+...+. ++|. -.++||||.
T Consensus 153 ~~Dt~pPtI-~~P~e-I~vYRGEe----vnft-~~VTDNSgk 187 (360)
T 3qc5_X 153 EKDTERPVV-NVPSE-ITVYRGES----FEYF-ATVTDNSNA 187 (360)
T ss_dssp CCCCCCCEE-ECCSE-EEEETTCE----EEEE-EEEECTTSC
T ss_pred cCCCCCCcc-cCCcc-EEEEcCCe----EEEE-EEEecCCCC
Confidence 358899999 44666 55554433 3444 245788887
No 175
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=28.81 E-value=2.6e+02 Score=30.11 Aligned_cols=86 Identities=13% Similarity=0.173 Sum_probs=0.0
Q ss_pred eEEEEEEEeCCC-----CEEEEEEEEEEec-CCCCeEeCCCCcEEEccCCCceeEEEecCCCcceeeecCCC--------
Q psy833 550 MAVKYIAYDFDG-----NVAICEINITVVD-ETPPLLSCPQSYIIELVDKQDSYVMNFNETRRRVNVSDASG-------- 615 (642)
Q Consensus 550 ~~Vtyta~D~~G-----n~a~C~f~v~v~d-~~pP~i~Cp~~~~i~~~~~~~~~~v~w~~p~~~~~~~Dnsg-------- 615 (642)
+.++..|.|..+ .++++.+.|.|.| +++|++. +..+.+.+.+....-.+.-.-- |+|...
T Consensus 296 y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND~P~f~-~~~~~~~v~E~~~~gt~v~~v~-----A~D~D~g~n~~i~y 369 (550)
T 3q2v_A 296 YILHVRVENEEPFEGSLVPSTATVTVDVVDVNEAPIFM-PAERRVEVPEDFGVGQEITSYT-----AREPDTFMDQKITY 369 (550)
T ss_dssp EEEEEEEEESSCCCSSCCCEEEEEEEEEECCCCCCEES-SSSCEEEEETTCCSSCEEEECC-----EECCCCSTTCCCEE
T ss_pred EEEEEEEEeCCCCCCCccceEEEEEEEEEecCCCCeEc-CcceEEEEecCCCCCCEEEEEe-----CCCCCCCCCCCEEE
Q ss_pred ------CeEEEeCCCCccc-cC-------------CCceEEEEEEeC
Q psy833 616 ------EVTVTFSPDRATI-LL-------------GDFENVTVTAAD 642 (642)
Q Consensus 616 ------~~~v~~~~~~g~~-~~-------------G~~~~v~~tatD 642 (642)
.-....+...|.+ .. +.+ .++++|+|
T Consensus 370 ~i~~~~~~~f~id~~tG~i~~~~~lDrE~~~~~~~~~y-~l~V~A~D 415 (550)
T 3q2v_A 370 RIWRDTANWLEINPETGAIFTRAEMDREDAEHVKNSTY-VALIIATD 415 (550)
T ss_dssp EEEECTTCCEEECTTTCEEEECSCCCTTCTTTCCSSEE-EEEEEEEC
T ss_pred EEecCCCCcEEEeCCCcEEEECCccCcccccccCCCEE-EEEEEEEe
No 176
>2vm9_A Discoidin-2, discoidin II; DDR, lectin, aggregation, cell adhesion; 1.75A {Dictyostelium discoideum} PDB: 2vmc_A* 2vmd_A* 2vme_A*
Probab=27.93 E-value=1.4e+02 Score=28.90 Aligned_cols=82 Identities=16% Similarity=0.161 Sum_probs=50.3
Q ss_pred Eeeceecccc---cccceeeeeeEeeccccceEEeeccceeccCCCCCccCcccc--cCccceeeeeEEeeEEEEEeCcc
Q psy833 388 LVKGVVTNDI---VGRPTEIRFFYKQAESENFVVYFPNFNLTMRDPGNYGELAMI--TLPKFVQARFVILGIVSYMDNAC 462 (642)
Q Consensus 388 ~~~g~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~v~~~C~~~ 462 (642)
.|.|+.++.. ...++.+++.|-.+. .+|..|...- ...|+......+ .+..+..+||+..-..++.-+.+
T Consensus 72 ~Vt~V~tQG~~~~~~~vt~Y~l~yS~Dg-~~W~~y~~~~----vF~GN~d~~t~v~~~l~~pi~ARyVRi~p~~w~~~i~ 146 (257)
T 2vm9_A 72 HFVAISTQGRGDHDQWVTSYKLRYTLDN-VNWVEYNNGE----IINANKDRNSIVTINFNPPIKARSIAIHPQTYNNHIS 146 (257)
T ss_dssp EEEEEEEECCSSSSCEEEEEEEEEESSS-SCEEEGGGGC----CEECCSSSSCCEEEEEEEEEEEEEEEEEEEEEESSCE
T ss_pred EEEEEEEeCCccCCceEEEEEEEEEcCC-CcEEEEcCCc----eecccCCCCceEEEeCCCCceEEEEEeeeeeecCceE
Confidence 4455554432 233445555554332 3466554211 123555544322 34567899999999999999999
Q ss_pred cceeecccCCCC
Q psy833 463 LKFELMGCEEPK 474 (642)
Q Consensus 463 ~gf~l~GC~~~g 474 (642)
|.+||.||....
T Consensus 147 lR~El~Gc~~~~ 158 (257)
T 2vm9_A 147 LRWELYALPVKS 158 (257)
T ss_dssp EEEEEEECCCCT
T ss_pred EEEEeccCCccc
Confidence 999999998654
No 177
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=26.29 E-value=1.1e+02 Score=29.80 Aligned_cols=30 Identities=27% Similarity=0.242 Sum_probs=24.6
Q ss_pred cceEEEEEEEeCCCCEEEEEEEEEEecCCC
Q psy833 548 HDMAVKYIAYDFDGNVAICEINITVVDETP 577 (642)
Q Consensus 548 G~~~Vtyta~D~~Gn~a~C~f~v~v~d~~p 577 (642)
|..+|+-+++|..|.+++=+..|+|....+
T Consensus 69 GtYtVtLTVtD~~G~s~t~t~~ItV~~~~a 98 (260)
T 2c4x_A 69 GTYKVKLIVTDNQGASSSFTATIKVTSATG 98 (260)
T ss_dssp EEEEEEEEEEETTSCEEEEEEEEEEBCSSS
T ss_pred EEEEEEEEEEeCCCCeEEEEEEEEECCCCC
Confidence 999999999999999877677777765443
No 178
>3n7s_A Calcitonin gene-related peptide type 1 receptor; GPCR, class B GPCR, antagonist, olcegepant, telcagepant, MIG membrane protein; HET: 3N6 3N7; 2.10A {Homo sapiens} PDB: 3n7r_A* 3n7p_A* 3aqf_B
Probab=24.66 E-value=51 Score=27.82 Aligned_cols=33 Identities=18% Similarity=0.319 Sum_probs=23.3
Q ss_pred cccCcEEEEEcccC---ccccCCccCCCceEEeccCCeecC
Q psy833 213 TRYQSSFFFGCQDT---FKLAGQTDKNDNVVRCQANGIWDF 250 (642)
Q Consensus 213 ~~~gs~~~~~C~~G---y~l~G~~~~~~~~~~C~~~G~Ws~ 250 (642)
...|.++...|..- |.-.|.. .+.|.++|+|+.
T Consensus 60 t~~G~~v~~~CP~~~~~f~~~g~v-----~R~C~~~G~W~~ 95 (115)
T 3n7s_A 60 VAAGTESMQLCPDYFQDFDPSEKV-----TKICDQDGNWFR 95 (115)
T ss_dssp EETTCEEEEECCSSSTTCCTTSEE-----EEEBCTTSCBCB
T ss_pred CCCCCEEEecCchhhcCCCCCCcE-----EeecCCCCCccc
Confidence 57788888888653 3333443 379999999973
No 179
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=24.10 E-value=1.5e+02 Score=32.31 Aligned_cols=86 Identities=16% Similarity=0.214 Sum_probs=46.0
Q ss_pred EEeeceecccc-----cccceeeeeeEeeccccceEEeeccce-eccCCCCCccCccccc--CccceeeeeEEeeEE-EE
Q psy833 387 ILVKGVVTNDI-----VGRPTEIRFFYKQAESENFVVYFPNFN-LTMRDPGNYGELAMIT--LPKFVQARFVILGIV-SY 457 (642)
Q Consensus 387 ~~~~g~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~v-~~ 457 (642)
..|.|+.++-. ..-++.+++.|-.. ..+|..|..... ......|+......+. ++ ++.+||+..-.+ .+
T Consensus 475 ~~VtgV~tQG~~~~~~~~~vtsY~l~yS~D-g~~W~~~~~~~~~~~kvF~GN~d~~t~v~~~~~-Pi~ARyvRi~P~~~~ 552 (577)
T 4gz9_A 475 KIVRGVIIQGGKHRENKVFMRKFKIAYSNN-GSDWKTIMDDSKRKAKSFEGNNNYDTPELRTFS-PLSTRFIRIYPERAT 552 (577)
T ss_dssp EEEEEEEEECEESSSCEECEEEEEEEEESS-SSSCEECBCTTSSSBCCEECCSSSSCCEEEEEE-EEEEEEEEEEEEEEB
T ss_pred EEEEEEEEeCCCCCCcceeEEEEEEEEECC-CCCeEEEEcCCCCceEEeeCccCCCeeEEeecC-CEEEEEEEEEEEEec
Confidence 34556655321 12345555555432 233655532211 0111245655443222 22 578999987766 45
Q ss_pred EeCcccceeecccCCCC
Q psy833 458 MDNACLKFELMGCEEPK 474 (642)
Q Consensus 458 ~C~~~~gf~l~GC~~~g 474 (642)
.-..+|.+||.||....
T Consensus 553 ~~~i~lR~El~GC~~~~ 569 (577)
T 4gz9_A 553 HSGLGLRMELLGCEVER 569 (577)
T ss_dssp TTBEEEEEEEEEECCC-
T ss_pred CCCEEEEEEEcccCchh
Confidence 56678999999998754
No 180
>2l27_A Seven transmembrane helix receptor; CRF, ECD1, family B1, alpha helical CRF, membrane P peptide binding protein; NMR {Homo sapiens}
Probab=23.21 E-value=27 Score=27.70 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=21.4
Q ss_pred cccCcEEEEEcccCcc-----ccCCccCCCceEEeccCCeecC
Q psy833 213 TRYQSSFFFGCQDTFK-----LAGQTDKNDNVVRCQANGIWDF 250 (642)
Q Consensus 213 ~~~gs~~~~~C~~Gy~-----l~G~~~~~~~~~~C~~~G~Ws~ 250 (642)
...|+++...|..-|. ..|..+ +.|.++|+|+.
T Consensus 34 t~~G~~v~~~CP~~~~~~~~~~~~~~~-----R~C~~~G~W~~ 71 (84)
T 2l27_A 34 SPAGQLVVRPCPAFFYGVRYNTTNNGY-----RECLANGSWAA 71 (84)
T ss_dssp CBSSBCCBCCCCSSBTTBCCCCSSCCB-----CCEETTTEECS
T ss_pred CCCCCEEEecCchhhcCcccCcCCcee-----cCCCCCCcCCC
Confidence 4556666667765432 234444 68999999985
No 181
>3c5t_A Glucagon-like peptide 1 receptor; ligand-bound G protein-coupled receptor extracellular domain protein coupled receptor, glycoprotein, membrane; HET: 10M; 2.10A {Homo sapiens} PDB: 3c59_A* 3iol_A*
Probab=21.39 E-value=89 Score=26.56 Aligned_cols=33 Identities=24% Similarity=0.370 Sum_probs=23.3
Q ss_pred ccccCcEEEEEcccCc---c--ccCCccCCCceEEeccCCeec
Q psy833 212 DTRYQSSFFFGCQDTF---K--LAGQTDKNDNVVRCQANGIWD 249 (642)
Q Consensus 212 ~~~~gs~~~~~C~~Gy---~--l~G~~~~~~~~~~C~~~G~Ws 249 (642)
....|+.+...|..-| . ..|.. ...|.++|+|.
T Consensus 51 ~t~~G~~v~~~CP~~~~~~~~~~~~~~-----~R~C~~~G~W~ 88 (122)
T 3c5t_A 51 DGEPGSFVNVSCPWYLPWASSVPQGHV-----YRFCTAEGLWL 88 (122)
T ss_dssp CBCTTEEEEEECCTTSTTGGGCTTCEE-----EEEECTTSSBC
T ss_pred CCCCCcEEEeeCcchhhCccccccceE-----ecCCCCCCccc
Confidence 3577888888997543 3 34444 37999999994
No 182
>2x57_A Vasoactive intestinal polypeptide receptor 2; G-protein coupled receptor, circadian rhythm, MALE reproduct hormone binding, growth, transducer; 2.10A {Homo sapiens}
Probab=21.08 E-value=73 Score=26.91 Aligned_cols=35 Identities=20% Similarity=0.442 Sum_probs=24.7
Q ss_pred ccccCcEEEEEcccCcc----ccCCccCCCceEEeccCCeecCCC
Q psy833 212 DTRYQSSFFFGCQDTFK----LAGQTDKNDNVVRCQANGIWDFGD 252 (642)
Q Consensus 212 ~~~~gs~~~~~C~~Gy~----l~G~~~~~~~~~~C~~~G~Ws~~~ 252 (642)
....|+.+...|..-|. ..|.. .+.|.++| |+..-
T Consensus 62 ~t~~G~~v~~~CP~~~~~~~~~~g~v-----~R~C~~~G-Ws~~~ 100 (116)
T 2x57_A 62 PANVGETVTVPCPKVFSNFYSKAGNI-----SKNCTSDG-WSETF 100 (116)
T ss_dssp CBCTTCEEEEECCGGGGGGBSSCCEE-----EEEEETTE-ECCCB
T ss_pred CCCCCCEEEecCcccccCccCCCCeE-----EeeCCccc-CCCCC
Confidence 35778889999986543 34444 37899999 97543
No 183
>2qkh_A Glucose-dependent insulinotropic polypeptide receptor; GPCR, incretin, hormone-GPCR complex, extracellular domain, ligand binding domain, ECD; HET: QKH; 1.90A {Homo sapiens}
Probab=20.15 E-value=50 Score=28.73 Aligned_cols=33 Identities=18% Similarity=0.308 Sum_probs=24.1
Q ss_pred ccccCcEEEEEcccCc---c--ccCCccCCCceEEeccCCeec
Q psy833 212 DTRYQSSFFFGCQDTF---K--LAGQTDKNDNVVRCQANGIWD 249 (642)
Q Consensus 212 ~~~~gs~~~~~C~~Gy---~--l~G~~~~~~~~~~C~~~G~Ws 249 (642)
....|+.+...|.+-| . -.|..+ ..|.++|+|+
T Consensus 70 ~t~~G~~v~~~CP~~~~~~~~~~~g~vs-----R~C~~dG~W~ 107 (135)
T 2qkh_A 70 YAAPNATARASCPWYLPWHHHVAAGFVL-----RQCGSDGQWG 107 (135)
T ss_dssp CBCTTEEEEEECCTTSTTHHHHTTCEEE-----EEECTTSCBC
T ss_pred CCCCCCEEEecCchhhcCcccCCCceEe-----ccCCCCCCCC
Confidence 3577888888997654 3 345443 6899999998
Done!