Query psy8342
Match_columns 225
No_of_seqs 307 out of 1568
Neff 9.0
Searched_HMMs 29240
Date Sat Aug 17 01:15:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8342.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8342hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z0u_A WW domain-containing pr 99.8 1.5E-21 5.2E-26 147.9 8.0 107 113-223 41-155 (155)
2 2b3r_A Phosphatidylinositol-4- 99.8 1.8E-20 6.1E-25 138.6 12.5 108 113-225 18-132 (134)
3 2d8k_A Synaptotagmin VII; exoc 99.8 1.4E-20 4.9E-25 140.1 11.6 110 112-225 23-137 (141)
4 3f04_A Synaptotagmin-1; C2A, c 99.8 6.9E-21 2.3E-25 142.1 9.5 108 113-224 32-143 (143)
5 3b7y_A E3 ubiquitin-protein li 99.8 2.5E-20 8.5E-25 140.6 12.5 115 110-224 15-135 (153)
6 1rsy_A Synaptotagmin I; calciu 99.8 2.3E-20 7.9E-25 140.8 11.2 108 113-224 40-151 (152)
7 2ep6_A MCTP2 protein; beta san 99.8 2E-20 6.7E-25 138.0 9.8 107 109-224 7-114 (133)
8 3m7f_B E3 ubiquitin-protein li 99.8 4.9E-20 1.7E-24 142.3 12.5 115 111-225 4-124 (176)
9 1rh8_A Piccolo protein; beta-s 99.8 1.4E-20 4.9E-25 140.2 8.6 108 114-225 17-140 (142)
10 3fdw_A Synaptotagmin-like prot 99.8 1.6E-20 5.3E-25 141.1 8.7 109 113-225 21-136 (148)
11 2q3x_A Regulating synaptic mem 99.8 2.3E-20 7.8E-25 143.7 9.1 108 114-225 29-141 (171)
12 1rlw_A Phospholipase A2, CALB 99.8 7E-20 2.4E-24 133.6 10.9 106 114-224 2-112 (126)
13 2fk9_A Protein kinase C, ETA t 99.8 1.6E-20 5.4E-25 142.3 7.6 112 110-224 24-146 (157)
14 3kwu_A MUNC13-1; calcium bindi 99.8 1.1E-19 3.9E-24 136.3 12.1 104 112-224 14-129 (148)
15 1ugk_A Synaptotagmin IV, KIAA1 99.8 1.7E-19 5.9E-24 133.7 12.2 110 113-225 20-135 (138)
16 2enp_A B/K protein; C2 type 1, 99.8 5.1E-20 1.8E-24 138.0 9.0 109 113-225 24-143 (147)
17 2dmh_A Myoferlin; beta-sandwic 99.8 3.5E-19 1.2E-23 132.3 12.7 101 112-220 4-109 (140)
18 1wfm_A Synaptotagmin XIII; C2 99.8 1.9E-19 6.5E-24 133.7 11.2 105 113-224 24-133 (138)
19 3fbk_A RGS3, RGP3, regulator o 99.8 2.5E-19 8.7E-24 135.2 11.5 108 112-224 24-138 (153)
20 1a25_A CALB, protein kinase C 99.8 2.3E-19 7.7E-24 134.9 11.0 106 114-224 30-140 (149)
21 1v27_A Regulating synaptic mem 99.8 3.3E-19 1.1E-23 132.4 11.7 107 113-224 19-134 (141)
22 2dmg_A KIAA1228 protein; beta- 99.8 1.6E-19 5.4E-24 134.5 9.8 109 113-225 22-137 (142)
23 3rdl_A Protein kinase C alpha 99.8 1.2E-19 4E-24 134.2 8.8 106 114-224 15-125 (137)
24 2bwq_A Regulating synaptic mem 99.8 3.6E-19 1.2E-23 130.3 10.6 105 113-222 16-129 (129)
25 1wfj_A Putative elicitor-respo 99.8 2E-19 6.8E-24 133.0 8.9 106 111-222 6-113 (136)
26 1gmi_A Protein kinase C, epsil 99.8 2.3E-19 7.9E-24 132.8 8.2 107 113-224 4-122 (136)
27 1tjx_A Similar to synaptotagmi 99.8 4.8E-19 1.7E-23 134.5 9.9 108 113-224 23-148 (159)
28 3n5a_A Synaptotagmin-7; calciu 99.8 5E-19 1.7E-23 130.9 9.5 111 113-223 14-138 (138)
29 3pyc_A E3 ubiquitin-protein li 99.8 1.1E-18 3.9E-23 128.3 11.1 105 114-224 4-113 (132)
30 2cm5_A Rabphilin-3A; protein t 99.8 2.6E-18 9E-23 131.3 11.9 113 113-225 35-161 (166)
31 2chd_A Rabphilin-3A, exophilin 99.8 1.4E-18 4.7E-23 129.4 9.9 107 113-223 27-140 (142)
32 1w15_A Synaptotagmin IV; metal 99.8 3E-18 1E-22 129.2 9.3 92 113-204 28-125 (153)
33 2r83_A Synaptotagmin-1; C2A-C2 99.7 9.4E-18 3.2E-22 138.7 12.6 108 113-224 17-128 (284)
34 2nq3_A Itchy homolog E3 ubiqui 99.7 5.5E-18 1.9E-22 130.5 9.9 110 111-224 32-143 (173)
35 2cjt_A UNC-13 homolog A, MUNC1 99.7 5.8E-17 2E-21 119.2 9.6 86 114-208 4-91 (131)
36 1dqv_A Synaptotagmin III; beta 99.7 4.2E-16 1.4E-20 129.7 12.6 111 111-224 16-131 (296)
37 2r83_A Synaptotagmin-1; C2A-C2 99.7 2.2E-16 7.5E-21 130.4 10.2 111 113-224 148-273 (284)
38 1cjy_A CPLA2, protein (cytosol 99.7 2.3E-16 7.7E-21 144.9 10.1 109 111-224 14-127 (749)
39 2cjs_A UNC-13 homolog A, MUNC1 99.6 9.4E-16 3.2E-20 117.3 10.5 87 113-208 12-100 (167)
40 3jzy_A Intersectin 2; C2 domai 99.6 7.4E-16 2.5E-20 137.1 8.6 109 113-224 385-495 (510)
41 1dqv_A Synaptotagmin III; beta 99.6 6.1E-16 2.1E-20 128.7 5.4 112 113-224 150-276 (296)
42 3nsj_A Perforin-1; pore formin 99.6 7.2E-15 2.5E-19 131.0 10.6 100 112-223 391-493 (540)
43 1djx_A PLC-D1, phosphoinositid 99.5 2.6E-14 8.8E-19 129.8 11.6 104 113-223 495-605 (624)
44 3bxj_A RAS GTPase-activating p 99.5 4.2E-15 1.4E-19 131.5 -0.4 100 113-222 9-115 (483)
45 3l9b_A Otoferlin; C2-domain, b 99.5 3.7E-13 1.3E-17 98.7 9.4 90 112-208 18-111 (144)
46 3pfq_A PKC-B, PKC-beta, protei 99.4 6.5E-13 2.2E-17 122.0 9.1 105 114-223 171-280 (674)
47 1tk7_A CG4244-PB; WW domain, n 99.4 4.6E-13 1.6E-17 91.2 5.6 81 18-99 6-88 (88)
48 2kxq_A E3 ubiquitin-protein li 99.4 1.1E-12 3.9E-17 89.7 6.6 81 19-100 4-88 (90)
49 3ohm_B 1-phosphatidylinositol- 99.2 8E-11 2.7E-15 109.9 12.7 96 113-222 723-825 (885)
50 2zkm_X 1-phosphatidylinositol- 99.2 9.2E-11 3.1E-15 109.1 10.4 97 113-223 676-780 (799)
51 2ysg_A Syntaxin-binding protei 99.2 2.2E-11 7.5E-16 70.2 3.8 35 65-99 5-39 (40)
52 3qr0_A Phospholipase C-beta (P 99.2 1.1E-10 3.7E-15 108.4 10.4 95 114-222 649-751 (816)
53 2dwv_A Salvador homolog 1 prot 99.1 2.6E-11 9E-16 72.8 3.7 35 66-100 12-46 (49)
54 2djy_A SMAD ubiquitination reg 99.1 3E-11 1E-15 70.3 3.7 36 65-100 5-40 (42)
55 2law_A Yorkie homolog; YAP, SM 99.1 2.4E-11 8.1E-16 69.2 3.0 34 66-99 5-38 (38)
56 2ysf_A E3 ubiquitin-protein li 99.1 3.2E-11 1.1E-15 69.5 3.5 35 65-99 5-39 (40)
57 2ez5_W Dnedd4, E3 ubiquitin-pr 99.1 6.7E-11 2.3E-15 70.2 4.2 37 65-101 8-44 (46)
58 1wr7_A NEDD4-2; all-beta, liga 99.1 7E-11 2.4E-15 68.5 3.9 35 65-99 6-40 (41)
59 1wr3_A Ubiquitin-protein ligas 99.1 5E-11 1.7E-15 67.2 3.2 34 66-99 3-36 (36)
60 2zaj_A Membrane-associated gua 99.1 5.2E-11 1.8E-15 71.4 3.3 36 65-100 11-46 (49)
61 2kyk_A E3 ubiquitin-protein li 99.1 6E-11 2E-15 68.0 3.4 35 65-99 4-38 (39)
62 1wr4_A Ubiquitin-protein ligas 99.1 1E-10 3.4E-15 66.0 3.4 34 66-99 3-36 (36)
63 2jmf_A E3 ubiquitin-protein li 99.1 1.1E-10 3.9E-15 71.1 3.6 37 64-100 15-51 (53)
64 2l4j_A YES-associated protein 99.0 1.2E-10 4.2E-15 69.0 3.6 36 65-100 9-44 (46)
65 1i5h_W Rnedd4, ubiquitin ligas 99.0 1.3E-10 4.4E-15 70.2 3.7 37 65-101 9-45 (50)
66 2ysb_A Salvador homolog 1 prot 99.0 1.7E-10 5.9E-15 69.2 3.9 38 65-102 9-46 (49)
67 1wmv_A WWOX, WW domain contain 99.0 2.1E-10 7.1E-15 70.3 4.4 40 64-103 8-47 (54)
68 2dmv_A Itchy homolog E3 ubiqui 99.0 1.4E-10 4.8E-15 67.9 3.4 36 65-100 5-40 (43)
69 2yse_A Membrane-associated gua 99.0 1.3E-10 4.3E-15 72.5 3.1 38 64-101 10-47 (60)
70 2kpz_A E3 ubiquitin-protein li 99.0 1.7E-10 5.7E-15 69.5 3.2 38 64-101 9-46 (49)
71 2ysd_A Membrane-associated gua 99.0 3.6E-10 1.2E-14 69.9 3.8 38 65-102 12-49 (57)
72 2ho2_A Fe65 protein, amyloid b 99.0 3.2E-10 1.1E-14 64.2 3.2 34 66-100 2-35 (38)
73 1e0m_A Wwprototype; SH3 protot 98.9 6.9E-10 2.4E-14 62.8 3.5 34 66-99 2-35 (37)
74 2ysh_A GAS-7, growth-arrest-sp 98.9 9E-10 3.1E-14 63.4 3.4 35 65-99 5-39 (40)
75 2e45_A Fe65 protein, amyloid b 98.9 8.6E-10 2.9E-14 66.3 3.1 35 65-100 17-51 (55)
76 2ysc_A Amyloid beta A4 precurs 98.9 1.1E-09 3.8E-14 62.3 3.0 33 65-98 6-38 (39)
77 1ymz_A CC45; artificial protei 98.9 1.6E-09 5.6E-14 63.4 3.3 35 65-99 6-40 (43)
78 1jmq_A YAP65, 65 kDa YES-assoc 98.8 4E-09 1.4E-13 62.6 3.0 37 66-102 7-43 (46)
79 2enj_A NPKC-theta, protein kin 98.7 2.3E-08 8E-13 72.2 7.2 105 113-224 8-119 (138)
80 3l4h_A E3 ubiquitin-protein li 98.7 5.3E-09 1.8E-13 72.7 3.6 37 65-101 70-106 (109)
81 2jv4_A Peptidyl-prolyl CIS/tra 98.7 8.2E-09 2.8E-13 63.1 3.6 35 66-100 6-41 (54)
82 1yrk_A NPKC-delta, protein kin 98.7 2.9E-08 1E-12 70.7 7.0 106 114-224 5-114 (126)
83 1o6w_A PRP40, PRE-mRNA process 98.7 1.5E-09 5.2E-14 71.5 -1.0 69 29-100 3-73 (75)
84 2l5f_A PRE-mRNA-processing fac 98.6 1.9E-08 6.6E-13 68.7 2.3 75 24-102 11-87 (92)
85 1tk7_A CG4244-PB; WW domain, n 98.5 3.9E-08 1.3E-12 66.6 3.2 37 64-100 9-45 (88)
86 2kxq_A E3 ubiquitin-protein li 98.5 6.9E-08 2.4E-12 65.7 3.2 36 65-100 7-42 (90)
87 2jxw_A WW domain-binding prote 98.5 1.8E-07 6.3E-12 61.3 4.8 68 28-98 5-74 (75)
88 3tc5_A Peptidyl-prolyl CIS-tra 98.3 4.8E-07 1.7E-11 68.5 4.4 37 66-102 8-45 (166)
89 1eg3_A Dystrophin; EF-hand lik 98.2 4E-07 1.4E-11 73.7 2.9 36 66-101 10-45 (261)
90 3olm_A E3 ubiquitin-protein li 98.2 6.4E-07 2.2E-11 77.8 3.0 39 65-103 6-44 (429)
91 2jx8_A Hpcif1, phosphorylated 98.2 3.3E-07 1.1E-11 55.5 0.6 35 66-100 9-44 (52)
92 2l5f_A PRE-mRNA-processing fac 97.9 5.2E-06 1.8E-10 56.5 3.1 36 65-100 9-44 (92)
93 2ysi_A Transcription elongatio 97.9 1.1E-05 3.9E-10 45.9 3.5 34 65-98 5-38 (40)
94 1ywi_A Formin-binding protein 97.7 2.2E-05 7.7E-10 44.9 2.6 34 65-98 7-40 (41)
95 1e0l_A Formin binding protein; 97.4 0.0001 3.6E-09 41.1 3.1 31 68-98 4-34 (37)
96 1e0n_A Hypothetical protein; Y 97.4 9.5E-05 3.2E-09 38.2 2.7 27 70-97 1-27 (27)
97 1o6w_A PRP40, PRE-mRNA process 97.4 6.7E-05 2.3E-09 48.9 2.6 31 70-100 2-32 (75)
98 2jxw_A WW domain-binding prote 96.9 0.00042 1.4E-08 45.1 2.5 30 70-99 5-34 (75)
99 2ysd_A Membrane-associated gua 96.5 0.0027 9.3E-08 38.8 3.5 47 19-71 9-57 (57)
100 2zaj_A Membrane-associated gua 95.5 0.0067 2.3E-07 35.8 2.1 39 16-55 5-45 (49)
101 1yw5_A Peptidyl prolyl CIS/tra 95.4 0.0089 3.1E-07 45.3 3.1 34 66-99 6-40 (177)
102 2dk1_A WW domain-binding prote 95.1 0.01 3.5E-07 35.1 1.9 29 71-99 8-36 (50)
103 3l4c_A Dedicator of cytokinesi 94.6 0.77 2.6E-05 35.8 12.0 62 143-204 71-139 (220)
104 2yse_A Membrane-associated gua 94.3 0.012 4.2E-07 36.2 0.9 37 17-54 6-44 (60)
105 2ysg_A Syntaxin-binding protei 94.3 0.027 9.3E-07 31.6 2.3 33 21-54 4-38 (40)
106 3hhm_A Phosphatidylinositol-4, 94.1 0.36 1.2E-05 46.3 10.8 92 114-206 354-456 (1091)
107 2dk7_A Transcription elongatio 94.1 0.032 1.1E-06 35.5 2.5 29 71-99 21-49 (73)
108 2ez5_W Dnedd4, E3 ubiquitin-pr 93.7 0.05 1.7E-06 31.5 2.7 33 22-55 8-42 (46)
109 2wxf_A Phosphatidylinositol-4, 93.5 0.41 1.4E-05 45.4 10.0 95 112-206 214-325 (940)
110 2ysf_A E3 ubiquitin-protein li 93.1 0.057 1.9E-06 30.2 2.2 32 22-54 5-38 (40)
111 3le4_A Microprocessor complex 92.4 0.14 4.9E-06 32.3 3.5 37 63-99 24-60 (79)
112 2dmv_A Itchy homolog E3 ubiqui 92.3 0.093 3.2E-06 29.8 2.5 33 22-55 5-39 (43)
113 2ysb_A Salvador homolog 1 prot 92.0 0.1 3.4E-06 30.7 2.4 32 23-55 10-43 (49)
114 2law_A Yorkie homolog; YAP, SM 91.9 0.08 2.7E-06 29.2 1.8 31 23-54 5-37 (38)
115 2kpz_A E3 ubiquitin-protein li 91.7 0.083 2.8E-06 31.0 1.8 34 22-56 10-45 (49)
116 1e7u_A Phosphatidylinositol 3- 91.6 0.84 2.9E-05 43.3 9.5 94 113-206 216-331 (961)
117 1i5h_W Rnedd4, ubiquitin ligas 91.5 0.11 3.9E-06 30.6 2.2 33 22-55 9-43 (50)
118 1wr4_A Ubiquitin-protein ligas 91.4 0.1 3.4E-06 28.3 1.9 30 23-53 3-34 (36)
119 1wr3_A Ubiquitin-protein ligas 90.9 0.13 4.4E-06 27.9 1.9 30 23-53 3-34 (36)
120 2ysh_A GAS-7, growth-arrest-sp 90.8 0.21 7.3E-06 27.7 2.9 32 22-54 5-38 (40)
121 2l4j_A YES-associated protein 90.5 0.19 6.4E-06 29.0 2.5 32 22-54 9-42 (46)
122 2ho2_A Fe65 protein, amyloid b 90.5 0.12 4.2E-06 28.6 1.6 30 24-55 3-34 (38)
123 2djy_A SMAD ubiquitination reg 90.4 0.14 4.9E-06 28.9 1.9 32 23-55 6-39 (42)
124 2kyk_A E3 ubiquitin-protein li 90.2 0.28 9.6E-06 27.1 3.0 31 23-54 5-37 (39)
125 1wr7_A NEDD4-2; all-beta, liga 89.4 0.16 5.5E-06 28.5 1.6 31 23-54 7-39 (41)
126 2dwv_A Salvador homolog 1 prot 89.3 0.15 5.2E-06 29.9 1.5 32 23-55 12-45 (49)
127 2jmf_A E3 ubiquitin-protein li 89.3 0.2 6.7E-06 29.9 2.0 33 22-55 16-50 (53)
128 1wmv_A WWOX, WW domain contain 89.2 0.36 1.2E-05 28.8 3.1 34 22-56 9-44 (54)
129 2y3a_A Phosphatidylinositol-4, 89.0 0.61 2.1E-05 44.8 6.1 95 112-206 350-471 (1092)
130 3l4h_A E3 ubiquitin-protein li 87.5 0.33 1.1E-05 33.4 2.4 35 20-55 68-104 (109)
131 1jmq_A YAP65, 65 kDa YES-assoc 87.2 0.4 1.4E-05 27.5 2.4 32 23-55 7-40 (46)
132 2jv4_A Peptidyl-prolyl CIS/tra 82.2 0.92 3.2E-05 27.0 2.4 32 23-55 6-40 (54)
133 2yrb_A Protein fantom; beta sa 70.9 12 0.0004 27.4 6.1 57 150-208 55-119 (156)
134 3olm_A E3 ubiquitin-protein li 67.0 2.5 8.6E-05 36.3 2.1 33 23-56 7-41 (429)
135 1eg3_A Dystrophin; EF-hand lik 65.5 1.9 6.5E-05 34.5 1.0 30 24-54 11-42 (261)
136 3tc5_A Peptidyl-prolyl CIS-tra 58.0 3.7 0.00013 30.3 1.4 33 23-56 8-43 (166)
137 2khr_A Protein MBTH; sideropho 20.6 60 0.002 20.4 2.1 47 39-99 16-64 (74)
No 1
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.85 E-value=1.5e-21 Score=147.91 Aligned_cols=107 Identities=19% Similarity=0.174 Sum_probs=90.4
Q ss_pred CccceeEeeeeeecCCcCCCCCC-eeEEEEeCCC---CccCcccCceecCCCCCeeccEEEEEecCC---CcEEEEEEEE
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGD---QTIDSALTKTRKKTLNPVWNEEFIFRVKPS---EHKLVFQVFD 185 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~---~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~---~~~L~v~V~d 185 (225)
..+.|.|.|++|++|+.+|.+|. ++|+.+.... ....++||+++++++||+|||+|.|.+... ...|.|+|||
T Consensus 41 ~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d 120 (155)
T 2z0u_A 41 KNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCT 120 (155)
T ss_dssp TTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEE
T ss_pred CCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEE
Confidence 45899999999999999998888 8888766543 222368999999999999999999998753 3689999999
Q ss_pred ccCCCCCceeEEEEEECcccCC-CCCCccccCeeEEccc
Q psy8342 186 MNRLTRDDFLGMVELSLLNLPR-ESDGCVIHNKKYILRP 223 (225)
Q Consensus 186 ~d~~~~d~~lG~~~i~l~~l~~-~~~~~~~~~~w~~L~p 223 (225)
+|.+++++|||++.|+|.++.. +... ..||.|+|
T Consensus 121 ~d~~~~~d~iG~~~i~l~~l~~~~~~~----~~W~~L~~ 155 (155)
T 2z0u_A 121 TDRSHLEECLGGAQISLAEVCRSGERS----TRWYNLLS 155 (155)
T ss_dssp ECTTSCEEEEEEEEEECTTSCTTCCCE----EEEEEEBC
T ss_pred CCCCCCCcEEEEEEEEHHHccCCCCcc----ccceEccC
Confidence 9999999999999999999963 3333 79999986
No 2
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.84 E-value=1.8e-20 Score=138.58 Aligned_cols=108 Identities=19% Similarity=0.256 Sum_probs=88.5
Q ss_pred CccceeEeeeeeecCCcCCCCCC-eeEEEEeC--CCCccCcccCceecCCCCCeeccEEEEE-ecC---CCcEEEEEEEE
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVN--GDQTIDSALTKTRKKTLNPVWNEEFIFR-VKP---SEHKLVFQVFD 185 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~--~~~~~~~~kT~v~~~~~~P~Wne~f~f~-v~~---~~~~L~v~V~d 185 (225)
..+.|.|+|++|++|+. +.+|. ++|+.+.. +.....+++|+++++++||+|||+|.|. +.. ....|.|+|||
T Consensus 18 ~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d 96 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLS 96 (134)
T ss_dssp ETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEE
T ss_pred cCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEE
Confidence 45899999999999997 66666 77776544 2223447899999999999999999999 763 34789999999
Q ss_pred ccCCCCCceeEEEEEECcccCCCCCCccccCeeEEcccCC
Q psy8342 186 MNRLTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRPRR 225 (225)
Q Consensus 186 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~prs 225 (225)
++.+++++|||++.|+|.++..+... ..||+|++++
T Consensus 97 ~d~~~~~~~lG~~~i~l~~l~~~~~~----~~W~~L~~~~ 132 (134)
T 2b3r_A 97 AESLRENFFLGGITLPLKDFNLSKET----VKWYQLTAAT 132 (134)
T ss_dssp CCSSSCCEEEEEEEEEGGGSCTTSCE----EEEEECBC--
T ss_pred CCCCCCCcEEEEEEEEhhhccCCCCc----ceeEECCCcc
Confidence 99999999999999999999876544 8999999874
No 3
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=1.4e-20 Score=140.11 Aligned_cols=110 Identities=26% Similarity=0.376 Sum_probs=92.8
Q ss_pred CCccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCCccCcccCceecCCCCCeeccEEEEEecC----CCcEEEEEEEEc
Q psy8342 112 EPTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQTIDSALTKTRKKTLNPVWNEEFIFRVKP----SEHKLVFQVFDM 186 (225)
Q Consensus 112 ~~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~----~~~~L~v~V~d~ 186 (225)
...+.|.|+|++|++|+.++..|. ++|+.+........+++|+++++++||+|||+|.|.+.. ....|.|+|||+
T Consensus 23 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 102 (141)
T 2d8k_A 23 FQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDY 102 (141)
T ss_dssp SSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEEC
T ss_pred CCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEEC
Confidence 346899999999999999998887 888876654333347899999999999999999998633 247899999999
Q ss_pred cCCCCCceeEEEEEECcccCCCCCCccccCeeEEcccCC
Q psy8342 187 NRLTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRPRR 225 (225)
Q Consensus 187 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~prs 225 (225)
+.++++++||++.|+|.++..+... ..||+|+|++
T Consensus 103 d~~~~~~~iG~~~i~l~~l~~~~~~----~~W~~L~~~~ 137 (141)
T 2d8k_A 103 DRFSRNDPIGEVSIPLNKVDLTQMQ----TFWKDLKPSG 137 (141)
T ss_dssp CSSSSCEEEEEEEEETTTSCTTSCE----EEEECCEECC
T ss_pred CCCCCCcEEEEEEEEhhhhcCCCCc----cEEEECcCCC
Confidence 9999999999999999999876543 8999999874
No 4
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.84 E-value=6.9e-21 Score=142.13 Aligned_cols=108 Identities=26% Similarity=0.361 Sum_probs=92.6
Q ss_pred CccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCCccCcccCceecCCCCCeeccEEEEEecCC---CcEEEEEEEEccC
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQTIDSALTKTRKKTLNPVWNEEFIFRVKPS---EHKLVFQVFDMNR 188 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~---~~~L~v~V~d~d~ 188 (225)
..+.|.|+|++|++|+.++..|. ++|+.+........+++|+++++++||+|||+|.|.+... ...|.|+|||++.
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 111 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR 111 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS
T ss_pred CCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC
Confidence 46889999999999999988777 7888766533333478999999999999999999998643 3789999999999
Q ss_pred CCCCceeEEEEEECcccCCCCCCccccCeeEEcccC
Q psy8342 189 LTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRPR 224 (225)
Q Consensus 189 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~pr 224 (225)
+++++|||++.|+|.++..+... ..||+|+|.
T Consensus 112 ~~~~~~iG~~~i~l~~l~~~~~~----~~W~~L~~~ 143 (143)
T 3f04_A 112 FSKHDIIGEFKVPMNTVDFGHVT----EEWRDLQSA 143 (143)
T ss_dssp SSCCEEEEEEEEEGGGCCTTSCE----EEEEECBCC
T ss_pred CCCCceEEEEEEEHHHccCCCCc----ceEEECcCC
Confidence 99999999999999999877555 799999984
No 5
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.84 E-value=2.5e-20 Score=140.63 Aligned_cols=115 Identities=50% Similarity=0.792 Sum_probs=90.1
Q ss_pred CCCCccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCCc---cCcccCceecCCCCCeeccEEEEEecCCCcEEEEEEEE
Q psy8342 110 PEEPTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQT---IDSALTKTRKKTLNPVWNEEFIFRVKPSEHKLVFQVFD 185 (225)
Q Consensus 110 ~~~~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~~---~~~~kT~v~~~~~~P~Wne~f~f~v~~~~~~L~v~V~d 185 (225)
.....+.|.|+|++|++|+.++..|. ++|+.+..+... ..+++|+++++++||+|||+|.|.+......|.|+|||
T Consensus 15 ~~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d 94 (153)
T 3b7y_A 15 DEENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFD 94 (153)
T ss_dssp CCTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEE
T ss_pred CCCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEE
Confidence 35567999999999999999988877 888876554221 24689999999999999999999998877899999999
Q ss_pred ccCCCCCceeEEEEEECcccCCCCCC--ccccCeeEEcccC
Q psy8342 186 MNRLTRDDFLGMVELSLLNLPRESDG--CVIHNKKYILRPR 224 (225)
Q Consensus 186 ~d~~~~d~~lG~~~i~l~~l~~~~~~--~~~~~~w~~L~pr 224 (225)
++.+++++|||++.|+|.++..+... ..+...||.|+++
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~ 135 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPR 135 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCS
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccc
Confidence 99999999999999999999866542 1223699999886
No 6
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.83 E-value=2.3e-20 Score=140.80 Aligned_cols=108 Identities=26% Similarity=0.361 Sum_probs=92.3
Q ss_pred CccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCCccCcccCceecCCCCCeeccEEEEEecCC---CcEEEEEEEEccC
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQTIDSALTKTRKKTLNPVWNEEFIFRVKPS---EHKLVFQVFDMNR 188 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~---~~~L~v~V~d~d~ 188 (225)
..+.|.|+|++|++|+.++.+|. ++|+.+........+++|+++++++||+|||+|.|.+... ...|.|+|||++.
T Consensus 40 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 119 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR 119 (152)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS
T ss_pred CCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCC
Confidence 46889999999999999998887 8888766543333478999999999999999999998643 4789999999999
Q ss_pred CCCCceeEEEEEECcccCCCCCCccccCeeEEcccC
Q psy8342 189 LTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRPR 224 (225)
Q Consensus 189 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~pr 224 (225)
++++++||++.|+|.++..+... ..||+|++.
T Consensus 120 ~~~~~~iG~~~i~l~~l~~~~~~----~~W~~L~~~ 151 (152)
T 1rsy_A 120 FSKHDIIGEFKVPMNTVDFGHVT----EEWRDLQSA 151 (152)
T ss_dssp SSCCEEEEEEEEEGGGCCCSSCE----EEEEECBCC
T ss_pred CCCCcEEEEEEEEchhccCCCCc----ceEEECCCC
Confidence 99999999999999999876544 899999875
No 7
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.83 E-value=2e-20 Score=138.02 Aligned_cols=107 Identities=26% Similarity=0.394 Sum_probs=94.8
Q ss_pred CCCCCccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCCccCcccCceecCCCCCeeccEEEEEecCCCcEEEEEEEEcc
Q psy8342 109 APEEPTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQTIDSALTKTRKKTLNPVWNEEFIFRVKPSEHKLVFQVFDMN 187 (225)
Q Consensus 109 ~~~~~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~~~~L~v~V~d~d 187 (225)
......+.|.|+|++|++|+.++..|. ++|+.+..+.. +++|+++++++||+|||+|.|.+......|.|+|||++
T Consensus 7 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~---~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d 83 (133)
T 2ep6_A 7 GDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGND---RLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDED 83 (133)
T ss_dssp CSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTE---EEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEE
T ss_pred cccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCE---EEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECC
Confidence 456688999999999999999998887 88888777653 67999999999999999999999987789999999999
Q ss_pred CCCCCceeEEEEEECcccCCCCCCccccCeeEEcccC
Q psy8342 188 RLTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRPR 224 (225)
Q Consensus 188 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~pr 224 (225)
.++++++||++.|+|.++..+. ..||+|.++
T Consensus 84 ~~~~~~~lG~~~i~l~~l~~~~------~~w~~L~~~ 114 (133)
T 2ep6_A 84 GDKPPDFLGKVAIPLLSIRDGQ------PNCYVLKNK 114 (133)
T ss_dssp TTEEEEECCBCEEEGGGCCSSC------CEECCCBCS
T ss_pred CCCCCCeeEEEEEEHHHccCCC------ceEEEeecC
Confidence 9989999999999999997542 689999864
No 8
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.83 E-value=4.9e-20 Score=142.34 Aligned_cols=115 Identities=48% Similarity=0.767 Sum_probs=87.5
Q ss_pred CCCccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCCc---cCcccCceecCCCCCeeccEEEEEecCCCcEEEEEEEEc
Q psy8342 111 EEPTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQT---IDSALTKTRKKTLNPVWNEEFIFRVKPSEHKLVFQVFDM 186 (225)
Q Consensus 111 ~~~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~~---~~~~kT~v~~~~~~P~Wne~f~f~v~~~~~~L~v~V~d~ 186 (225)
....+.|.|+|++|++|+.++..|. ++|+.+..+... ..+++|+++++++||+|||+|.|.+......|.|+|||+
T Consensus 4 ~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~ 83 (176)
T 3m7f_B 4 NDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDE 83 (176)
T ss_dssp CTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEEC
T ss_pred CCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEEC
Confidence 4567999999999999999998887 888876655322 136799999999999999999999997778999999999
Q ss_pred cCCCCCceeEEEEEECcccCCCCCC--ccccCeeEEcccCC
Q psy8342 187 NRLTRDDFLGMVELSLLNLPRESDG--CVIHNKKYILRPRR 225 (225)
Q Consensus 187 d~~~~d~~lG~~~i~l~~l~~~~~~--~~~~~~w~~L~prs 225 (225)
+.+++++|||++.|+|.++..+... .....+||.|++++
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~ 124 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRS 124 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC------CCCCEEEECBCSS
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccC
Confidence 9999999999999999999866432 11223899999863
No 9
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.83 E-value=1.4e-20 Score=140.15 Aligned_cols=108 Identities=23% Similarity=0.353 Sum_probs=91.4
Q ss_pred ccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCCc-----------cCcccCceecCCCCCeeccEEEEE-ecC---CCc
Q psy8342 114 TEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQT-----------IDSALTKTRKKTLNPVWNEEFIFR-VKP---SEH 177 (225)
Q Consensus 114 ~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~~-----------~~~~kT~v~~~~~~P~Wne~f~f~-v~~---~~~ 177 (225)
.+.|.|+|++|++|+.++.+|. ++|+.+..+... ..+++|+++++++||+|||+|.|. +.. ...
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 5789999999999999998887 888877665432 135899999999999999999997 543 346
Q ss_pred EEEEEEEEccCCCCCceeEEEEEECcccCCCCCCccccCeeEEcccCC
Q psy8342 178 KLVFQVFDMNRLTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRPRR 225 (225)
Q Consensus 178 ~L~v~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~prs 225 (225)
.|.|+|||++.+++++|||++.|+|.++..+... ..||+|++++
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~----~~W~~L~~~~ 140 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNT----PRWYPLKEQT 140 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTC----CEEEECBCCC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCC----CeEEECCccC
Confidence 8999999999999999999999999998765444 8999999875
No 10
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.83 E-value=1.6e-20 Score=141.08 Aligned_cols=109 Identities=20% Similarity=0.283 Sum_probs=91.0
Q ss_pred CccceeEeeeeeecCCcCC-CCCC-eeEEEEeCCCCc--cCcccCceecCCCCCeeccEEEEEecCCC---cEEEEEEEE
Q psy8342 113 PTEQIRLRIIAGHSLAKKD-IFGA-RIDLNTVNGDQT--IDSALTKTRKKTLNPVWNEEFIFRVKPSE---HKLVFQVFD 185 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d-~~g~-~~~~~~~~~~~~--~~~~kT~v~~~~~~P~Wne~f~f~v~~~~---~~L~v~V~d 185 (225)
..+.|.|+|++|++|+.++ ..|. ++|+.+...... ..+++|+++++++||+|||+|.|.+...+ ..|.|+|||
T Consensus 21 ~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d 100 (148)
T 3fdw_A 21 QTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWH 100 (148)
T ss_dssp TTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEE
Confidence 4688999999999999888 4566 777765554322 34789999999999999999999987653 579999999
Q ss_pred ccCCCCCceeEEEEEECcccCCCCCCccccCeeEEcccCC
Q psy8342 186 MNRLTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRPRR 225 (225)
Q Consensus 186 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~prs 225 (225)
+|.+++++|||++.|+|.++..+... .+||+|+|+.
T Consensus 101 ~d~~~~~~~iG~~~i~l~~l~~~~~~----~~W~~L~~~~ 136 (148)
T 3fdw_A 101 HGRFGRNTFLGEAEIQMDSWKLDKKL----DHCLPLHGKI 136 (148)
T ss_dssp ECGGGCEEEEEEEEEEHHHHHHHCCS----EEEEECBCC-
T ss_pred CCCCcCCcEEEEEEEEcccccccCCc----cceEECcCcc
Confidence 99999999999999999999866544 7999999974
No 11
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.82 E-value=2.3e-20 Score=143.66 Aligned_cols=108 Identities=23% Similarity=0.325 Sum_probs=91.0
Q ss_pred ccceeEeeeeeecCCcCCC-CCC-eeEEEEeCCCCc--cCcccCceecCCCCCeeccEEEEEecCCCcEEEEEEE-EccC
Q psy8342 114 TEQIRLRIIAGHSLAKKDI-FGA-RIDLNTVNGDQT--IDSALTKTRKKTLNPVWNEEFIFRVKPSEHKLVFQVF-DMNR 188 (225)
Q Consensus 114 ~~~l~v~vi~a~~L~~~d~-~g~-~~~~~~~~~~~~--~~~~kT~v~~~~~~P~Wne~f~f~v~~~~~~L~v~V~-d~d~ 188 (225)
.+.|.|+|++|++|+.+|. .|. ++|+.+...... ..+++|+++++++||+|||+|.|.+......|.|+|| |+|.
T Consensus 29 ~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d~ 108 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGR 108 (171)
T ss_dssp TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECST
T ss_pred CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCCC
Confidence 5889999999999999985 566 888766544321 2368999999999999999999999877789999999 9999
Q ss_pred CCCCceeEEEEEECcccCCCCCCccccCeeEEcccCC
Q psy8342 189 LTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRPRR 225 (225)
Q Consensus 189 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~prs 225 (225)
+++++|||++.|+|.++..+... .+||+|++++
T Consensus 109 ~~~d~~iG~~~i~l~~l~~~~~~----~~W~~L~~~~ 141 (171)
T 2q3x_A 109 MDHKCFMGVAQILLEELDLSSMV----IGWYKLFPPS 141 (171)
T ss_dssp TCSSEEEEEEEECGGGSCTTSCE----EEEEECBCGG
T ss_pred CCCCCEEEEEEEEHHHcccCCCc----ceeEECCCcc
Confidence 99999999999999999866544 8999999863
No 12
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.82 E-value=7e-20 Score=133.60 Aligned_cols=106 Identities=19% Similarity=0.365 Sum_probs=89.6
Q ss_pred ccceeEeeeeeecCCcC---CCCCC-eeEEEEeCCCCccCcccCceecCCCCCeeccEEEEEecC-CCcEEEEEEEEccC
Q psy8342 114 TEQIRLRIIAGHSLAKK---DIFGA-RIDLNTVNGDQTIDSALTKTRKKTLNPVWNEEFIFRVKP-SEHKLVFQVFDMNR 188 (225)
Q Consensus 114 ~~~l~v~vi~a~~L~~~---d~~g~-~~~~~~~~~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~-~~~~L~v~V~d~d~ 188 (225)
.+.|.|+|++|++|+.+ +..|. ++|+.+..+.....+++|+++++++||+|||+|.|.+.. ....|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 47899999999999984 55566 888888777543457899999999999999999999954 45789999999998
Q ss_pred CCCCceeEEEEEECcccCCCCCCccccCeeEEcccC
Q psy8342 189 LTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRPR 224 (225)
Q Consensus 189 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~pr 224 (225)
++ +++||++.++|.++..+... ..||+|.+.
T Consensus 82 ~~-~~~iG~~~i~l~~l~~~~~~----~~~~~L~~~ 112 (126)
T 1rlw_A 82 VM-DETLGTATFTVSSMKVGEKK----EVPFIFNQV 112 (126)
T ss_dssp SC-CEEEEEEEEEGGGSCTTCEE----EEEEEETTT
T ss_pred CC-CceeEEEEEEHHHccCCCcE----EEEEEcCCC
Confidence 85 89999999999999866544 799999864
No 13
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.82 E-value=1.6e-20 Score=142.26 Aligned_cols=112 Identities=23% Similarity=0.229 Sum_probs=91.1
Q ss_pred CCCCccceeEeeeeeecCCcCCCC----------CC-eeEEEEeCCCCccCcccCceecCCCCCeeccEEEEEecCCCcE
Q psy8342 110 PEEPTEQIRLRIIAGHSLAKKDIF----------GA-RIDLNTVNGDQTIDSALTKTRKKTLNPVWNEEFIFRVKPSEHK 178 (225)
Q Consensus 110 ~~~~~~~l~v~vi~a~~L~~~d~~----------g~-~~~~~~~~~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~~~~ 178 (225)
.....+.|.|+|++|++|+.+|.. |. ++|+.+..+... ..+|+++++++||+|||+|.|.+... ..
T Consensus 24 ~~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~--~~kT~v~~ktlnP~WNE~F~f~v~~~-~~ 100 (157)
T 2fk9_A 24 TMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVR--VGQTSTKQKTNKPTYNEEFCANVTDG-GH 100 (157)
T ss_dssp CCCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEE--EEECCCCSSCSSCEEEEEEEEEEEEE-CE
T ss_pred hccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEe--eEEeeecCCCCCCccCcEEEEEcCCC-CE
Confidence 345679999999999999988732 44 889988777542 46899999999999999999999754 58
Q ss_pred EEEEEEEccCCCCCceeEEEEEECcccCCCCCCccccCeeEEcccC
Q psy8342 179 LVFQVFDMNRLTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRPR 224 (225)
Q Consensus 179 L~v~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~pr 224 (225)
|.|+|||+|.+++|+|||++.|+|.++..+.......+.||+|+|.
T Consensus 101 L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~~ 146 (157)
T 2fk9_A 101 LELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEPE 146 (157)
T ss_dssp EEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBSS
T ss_pred EEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCCC
Confidence 9999999999999999999999999987541011123899999975
No 14
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.82 E-value=1.1e-19 Score=136.25 Aligned_cols=104 Identities=29% Similarity=0.429 Sum_probs=91.0
Q ss_pred CCccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCCccCcccCceecCCCCCeeccEEEEEecCCCcEEEEEEEEccCC-
Q psy8342 112 EPTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQTIDSALTKTRKKTLNPVWNEEFIFRVKPSEHKLVFQVFDMNRL- 189 (225)
Q Consensus 112 ~~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~~~~L~v~V~d~d~~- 189 (225)
...+.|.|+|++|++|+.++.+|. ++|+.+..+.. +++|+++++++||.|||+|.|.+......|.|+|||++.+
T Consensus 14 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~---~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~ 90 (148)
T 3kwu_A 14 KWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKT---KKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDI 90 (148)
T ss_dssp -CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTE---EEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSH
T ss_pred ccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCE---EEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCc
Confidence 346999999999999999998887 88888777643 6799999999999999999999988778999999999986
Q ss_pred ----------CCCceeEEEEEECcccCCCCCCccccCeeEEcccC
Q psy8342 190 ----------TRDDFLGMVELSLLNLPRESDGCVIHNKKYILRPR 224 (225)
Q Consensus 190 ----------~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~pr 224 (225)
++++|||++.|+|.++... . ..||+|+++
T Consensus 91 ~~~~~~~~~~~~~~~lG~~~i~l~~l~~~--~----~~w~~L~~~ 129 (148)
T 3kwu_A 91 KSRVKQRFKRESDDFLGQTIIEVRTLSGE--M----DVWYNLDKR 129 (148)
T ss_dssp HHHHHTTTSSCSSEEEEEEEEEGGGCCSE--E----EEEEECBCS
T ss_pred cccccccccCCCCccEEEEEEEHHHCcCC--C----CEEEEcccC
Confidence 7899999999999999422 2 799999975
No 15
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.81 E-value=1.7e-19 Score=133.73 Aligned_cols=110 Identities=19% Similarity=0.256 Sum_probs=91.4
Q ss_pred CccceeEeeeeeecCCcCCCC-CC-eeEEEEeCCCCccCcccCceecCCCCCeeccEEEEE-ecCC---CcEEEEEEEEc
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIF-GA-RIDLNTVNGDQTIDSALTKTRKKTLNPVWNEEFIFR-VKPS---EHKLVFQVFDM 186 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~-g~-~~~~~~~~~~~~~~~~kT~v~~~~~~P~Wne~f~f~-v~~~---~~~L~v~V~d~ 186 (225)
..+.|.|+|++|++|+.++.+ |. ++|+.+........+++|+++++++||+|||+|.|. +... ...|.|+|||+
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~ 99 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSF 99 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEEC
Confidence 457899999999999999985 66 888876654333357899999999999999999996 6543 36899999999
Q ss_pred cCCCCCceeEEEEEECcccCCCCCCccccCeeEEcccCC
Q psy8342 187 NRLTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRPRR 225 (225)
Q Consensus 187 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~prs 225 (225)
+.+++++|||++.|+|.++..+.+. ...|+.|++|+
T Consensus 100 d~~~~~~~lG~~~i~l~~l~~~~~~---~~~~~~l~~~~ 135 (138)
T 1ugk_A 100 DRFSRDDIIGEVLIPLSGIELSEGK---MLMNREIISGP 135 (138)
T ss_dssp CSSCCCCCCEEEEEECTTCCCTTCC---EEEEEECBSSS
T ss_pred CCCCCCcEEEEEEEehhHccCCCCc---chhhhhhhcCC
Confidence 9999999999999999999876543 15689999874
No 16
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.81 E-value=5.1e-20 Score=138.04 Aligned_cols=109 Identities=19% Similarity=0.286 Sum_probs=89.9
Q ss_pred CccceeEeeeeeecCCcC-CCC------CC-eeEEEEeCCCCccCcccCceecCCCCCeeccEEEEEecCC---CcEEEE
Q psy8342 113 PTEQIRLRIIAGHSLAKK-DIF------GA-RIDLNTVNGDQTIDSALTKTRKKTLNPVWNEEFIFRVKPS---EHKLVF 181 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~-d~~------g~-~~~~~~~~~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~---~~~L~v 181 (225)
..+.|.|+|++|++|+.. +.+ |. ++|+.+........+++|+++++++||+|||+|.|.+... ...|.|
T Consensus 24 ~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~ 103 (147)
T 2enp_A 24 LHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLL 103 (147)
T ss_dssp TTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEE
T ss_pred CCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEE
Confidence 468999999999999984 444 34 7777665543333478999999999999999999998653 358999
Q ss_pred EEEEccCCCCCceeEEEEEECcccCCCCCCccccCeeEEcccCC
Q psy8342 182 QVFDMNRLTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRPRR 225 (225)
Q Consensus 182 ~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~prs 225 (225)
+|||++.+++++|||++.|+|.++...... ..||.|+|++
T Consensus 104 ~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~----~~w~~L~~~~ 143 (147)
T 2enp_A 104 TVVDFDKFSRHCVIGKVSVPLCEVDLVKGG----HWWKALIPSG 143 (147)
T ss_dssp EEECCSTTCCSCCCEEEEEETTTSCTTTCC----CEEECCBCCC
T ss_pred EEEECCCCcCCcEEEEEEEechhcCCCCCc----cEEEEeecCC
Confidence 999999999999999999999999765444 7999999975
No 17
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=3.5e-19 Score=132.30 Aligned_cols=101 Identities=21% Similarity=0.370 Sum_probs=88.5
Q ss_pred CCccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCCccCcccCceecCCCCCeeccEEEEEecCC----CcEEEEEEEEc
Q psy8342 112 EPTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQTIDSALTKTRKKTLNPVWNEEFIFRVKPS----EHKLVFQVFDM 186 (225)
Q Consensus 112 ~~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~----~~~L~v~V~d~ 186 (225)
...+.|.|+|++|++|+.++. |. ++|+.+..+.. +++|+++++++||+|||+|.|.+... ...|.|+|||+
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~---~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~ 79 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDE---KKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDF 79 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSC---EEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEET
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCE---eEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEEC
Confidence 456899999999999999998 76 88988877743 68999999999999999999999753 47899999999
Q ss_pred cCCCCCceeEEEEEECcccCCCCCCccccCeeEE
Q psy8342 187 NRLTRDDFLGMVELSLLNLPRESDGCVIHNKKYI 220 (225)
Q Consensus 187 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~ 220 (225)
+.+++++|||++.|+|.+|..+... ..||.
T Consensus 80 d~~~~~~~lG~~~i~l~~l~~~~~~----~~w~~ 109 (140)
T 2dmh_A 80 ETIGQNKLIGTATVALKDLTGDQSR----SLPYK 109 (140)
T ss_dssp TCSSSCCCCEEEEEEGGGTCSSSCE----EEEEE
T ss_pred CCCCCCceEEEEEEEHHHhccCCCc----eeEEe
Confidence 9999999999999999999876544 78988
No 18
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.81 E-value=1.9e-19 Score=133.66 Aligned_cols=105 Identities=13% Similarity=0.192 Sum_probs=86.8
Q ss_pred CccceeEeeeeeecCCcCCCCCC-eeEEEEeCCC-CccCcccCceecCCCCCeeccEEEEEecCC---CcEEEEEEEEcc
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGD-QTIDSALTKTRKKTLNPVWNEEFIFRVKPS---EHKLVFQVFDMN 187 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~-~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~---~~~L~v~V~d~d 187 (225)
..+.|.|+|++|++ +|.+|. ++|+.+.... ....+++|+++++++||+|||+|.|.+... ...|.|+|||+|
T Consensus 24 ~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d 100 (138)
T 1wfm_A 24 QKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCD 100 (138)
T ss_dssp TTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECC
Confidence 46889999999993 666776 7887765532 123368999999999999999999998764 368999999999
Q ss_pred CCCCCceeEEEEEECcccCCCCCCccccCeeEEcccC
Q psy8342 188 RLTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRPR 224 (225)
Q Consensus 188 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~pr 224 (225)
.+++++|||++.|+|.++..+... ..||.|++.
T Consensus 101 ~~~~dd~lG~~~i~l~~l~~~~~~----~~W~~L~~~ 133 (138)
T 1wfm_A 101 RFSRHSVAGELRLGLDGTSVPLGA----AQWGELKTS 133 (138)
T ss_dssp SSCTTSCSEEEEEESSSSSSCTTC----CEEEECCCC
T ss_pred CCCCCcEEEEEEEEcccccCcccc----cceeeCcCC
Confidence 999999999999999999755444 899999985
No 19
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.80 E-value=2.5e-19 Score=135.24 Aligned_cols=108 Identities=20% Similarity=0.331 Sum_probs=88.1
Q ss_pred CCccceeEeeeeeecCCcCCCCCC-eeEEEEeCC--CCccCcccCceecCCCCCeeccEEEEEec--CCCcEEEEEEEEc
Q psy8342 112 EPTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNG--DQTIDSALTKTRKKTLNPVWNEEFIFRVK--PSEHKLVFQVFDM 186 (225)
Q Consensus 112 ~~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~--~~~~~~~kT~v~~~~~~P~Wne~f~f~v~--~~~~~L~v~V~d~ 186 (225)
...+.|.|+|++|++|+.++ .|. ++|+.+... .....+++|+++++++||+|||+|.|.+. .....|.|+|||+
T Consensus 24 ~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~ 102 (153)
T 3fbk_A 24 AQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNR 102 (153)
T ss_dssp ESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEEC
T ss_pred CCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeC
Confidence 34689999999999999998 566 777765442 22344789999999999999999999984 3446799999999
Q ss_pred cCCCC-CceeEEEEEECcccCC-CCCCccccCeeEEcccC
Q psy8342 187 NRLTR-DDFLGMVELSLLNLPR-ESDGCVIHNKKYILRPR 224 (225)
Q Consensus 187 d~~~~-d~~lG~~~i~l~~l~~-~~~~~~~~~~w~~L~pr 224 (225)
+.+++ ++|||++.|+|.+|.. +... .+||.|.++
T Consensus 103 d~~~~~d~~lG~~~i~l~~l~~~~~~~----~~W~~L~~~ 138 (153)
T 3fbk_A 103 ASQSRQSGLIGCMSFGVKSLLTPDKEI----SGWYYLLGE 138 (153)
T ss_dssp CSSGGGCEEEEEEEEEHHHHTC--CCE----EEEEECBCT
T ss_pred CCCCCCCcEEEEEEEEHHHhcCCCCcc----ccEEECCCh
Confidence 99887 8999999999999985 4433 799999986
No 20
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.80 E-value=2.3e-19 Score=134.86 Aligned_cols=106 Identities=25% Similarity=0.375 Sum_probs=89.7
Q ss_pred ccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCC--ccCcccCceecCCCCCeeccEEEEEecCC--CcEEEEEEEEccC
Q psy8342 114 TEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQ--TIDSALTKTRKKTLNPVWNEEFIFRVKPS--EHKLVFQVFDMNR 188 (225)
Q Consensus 114 ~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~--~~~~~kT~v~~~~~~P~Wne~f~f~v~~~--~~~L~v~V~d~d~ 188 (225)
.+.|.|+|++|++|+.++..|. ++|+.+..... ...+++|+++++++||+|||+|.|.+... ...|.|+|||++.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 4679999999999999998887 78876655432 23478999999999999999999999764 3689999999999
Q ss_pred CCCCceeEEEEEECcccCCCCCCccccCeeEEcccC
Q psy8342 189 LTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRPR 224 (225)
Q Consensus 189 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~pr 224 (225)
+++++|||++.|+|.+|... .. ..||.|.++
T Consensus 110 ~~~~~~iG~~~i~l~~l~~~-~~----~~W~~L~~~ 140 (149)
T 1a25_A 110 TSRNDFMGSLSFGISELQKA-GV----DGWFKLLSQ 140 (149)
T ss_dssp SSCCEEEEEEEEEHHHHTTC-CE----EEEEECBCH
T ss_pred CCCCCEEEEEEEEHHHhCcC-cc----CCeEEccCC
Confidence 99999999999999999865 23 799999874
No 21
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.80 E-value=3.3e-19 Score=132.43 Aligned_cols=107 Identities=23% Similarity=0.332 Sum_probs=89.6
Q ss_pred CccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCC--ccCcccCceecCCCCCeeccEEEEEe-cCC---CcEEEEEEEE
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQ--TIDSALTKTRKKTLNPVWNEEFIFRV-KPS---EHKLVFQVFD 185 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~--~~~~~kT~v~~~~~~P~Wne~f~f~v-~~~---~~~L~v~V~d 185 (225)
..+.|.|+|++|++|+.++.+|. ++|+.+..... ...+++|+++++++||+|||+|.|.+ ... ...|.|+|||
T Consensus 19 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 98 (141)
T 1v27_A 19 VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWD 98 (141)
T ss_dssp TTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEE
T ss_pred CCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEE
Confidence 35889999999999999998887 88887765321 23478999999999999999999995 322 3789999999
Q ss_pred ccCCCC--CceeEEEEEECcccCCCCCCccccCeeEEcccC
Q psy8342 186 MNRLTR--DDFLGMVELSLLNLPRESDGCVIHNKKYILRPR 224 (225)
Q Consensus 186 ~d~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~pr 224 (225)
++.+++ ++|||++.|+|.++.... . ..||+|+++
T Consensus 99 ~d~~~~~~~~~lG~~~i~l~~l~~~~-~----~~W~~L~~~ 134 (141)
T 1v27_A 99 QARVREEESEFLGEILIELETALLDD-E----PHWYKLQTH 134 (141)
T ss_dssp BCSSSSCCBCCCEEEEEEGGGCCCSS-E----EEEEECBCC
T ss_pred CCCCcCCCCceEEEEEEEccccCCCC-C----CceEECccc
Confidence 999987 899999999999987542 2 799999986
No 22
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.80 E-value=1.6e-19 Score=134.52 Aligned_cols=109 Identities=20% Similarity=0.175 Sum_probs=88.9
Q ss_pred CccceeEeeeeeecCCcCCCCCCeeEEEEeCCC--CccCcccCceecCCCCCeeccEEEEEecCC---CcEEEEEEEEcc
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGARIDLNTVNGD--QTIDSALTKTRKKTLNPVWNEEFIFRVKPS---EHKLVFQVFDMN 187 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~~~~~~~~~~~--~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~---~~~L~v~V~d~d 187 (225)
..+.|.|.|++|++|+.++..|.++|+.+.... ....+++|+++++++||+|||+|.|.+... ...|.|+|||++
T Consensus 22 ~~~~L~v~v~~a~~L~~~d~~g~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 101 (142)
T 2dmg_A 22 QRNKLIVVVHACRNLIAFSEDGSDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSG 101 (142)
T ss_dssp TTTEEEEEEEEEECCCCSSTTCCCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECC
T ss_pred CCCEEEEEEEEeECCCCCCCCCCCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECC
Confidence 468899999999999999877676777654422 223578999999999999999999998643 258999999999
Q ss_pred CCCC--CceeEEEEEECcccCCCCCCccccCeeEEcccCC
Q psy8342 188 RLTR--DDFLGMVELSLLNLPRESDGCVIHNKKYILRPRR 225 (225)
Q Consensus 188 ~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~prs 225 (225)
.+++ ++|||++.|+|.++...... ..||.|.+++
T Consensus 102 ~~~~~~~~~iG~~~i~l~~~~~~~~~----~~W~~L~~~~ 137 (142)
T 2dmg_A 102 GFLSKDKGLLGKVLVALASEELAKGW----TQWYDLTEDS 137 (142)
T ss_dssp CSSCCSCCCCEEEEEECCCSTTTTCB----CCBCCCBCSC
T ss_pred CccccCCcEEEEEEEecccccccccc----cceeeccCCC
Confidence 8864 57999999999999866544 8999999863
No 23
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.80 E-value=1.2e-19 Score=134.22 Aligned_cols=106 Identities=28% Similarity=0.465 Sum_probs=89.7
Q ss_pred ccceeEeeeeeecCCcCCCCCC-eeEEEEeCCC--CccCcccCceecCCCCCeeccEEEEEecCCC--cEEEEEEEEccC
Q psy8342 114 TEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGD--QTIDSALTKTRKKTLNPVWNEEFIFRVKPSE--HKLVFQVFDMNR 188 (225)
Q Consensus 114 ~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~--~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~~--~~L~v~V~d~d~ 188 (225)
.+.|.|+|++|++|+.++..|. ++|+.+.... ....+++|+++++++||+|||+|.|.+...+ ..|.|+|||++.
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~ 94 (137)
T 3rdl_A 15 DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDR 94 (137)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCC
Confidence 5899999999999999998877 7777665522 1334789999999999999999999987543 589999999999
Q ss_pred CCCCceeEEEEEECcccCCCCCCccccCeeEEcccC
Q psy8342 189 LTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRPR 224 (225)
Q Consensus 189 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~pr 224 (225)
++++++||++.|+|.++.... . .+||.|.++
T Consensus 95 ~~~~~~iG~~~i~l~~l~~~~-~----~~W~~L~~~ 125 (137)
T 3rdl_A 95 TTRNDFMGSLSFGVSELMKMP-A----SGWYKLLNQ 125 (137)
T ss_dssp SSCCEEEEEEEEEHHHHHHSC-E----EEEEECBCH
T ss_pred CCCCceEEEEEEeHHHhccCc-c----CceEECcCc
Confidence 999999999999999997543 3 899999874
No 24
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.80 E-value=3.6e-19 Score=130.32 Aligned_cols=105 Identities=24% Similarity=0.326 Sum_probs=82.7
Q ss_pred CccceeEeeeeeecCCcCCCCCC-eeEEEEeCCC--CccCcccCceecCCCCCeeccEEEEEecC----CCcEEEEEEEE
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGD--QTIDSALTKTRKKTLNPVWNEEFIFRVKP----SEHKLVFQVFD 185 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~--~~~~~~kT~v~~~~~~P~Wne~f~f~v~~----~~~~L~v~V~d 185 (225)
..+.|.|+|++|++|+.++..|. ++|+.+.... ....+++|+++++++||+|||+|.|.+.. ....|.|+|||
T Consensus 16 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d 95 (129)
T 2bwq_A 16 VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWD 95 (129)
T ss_dssp TTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEE
Confidence 45889999999999999998887 7777655421 12347899999999999999999999532 23789999999
Q ss_pred ccCCCC--CceeEEEEEECcccCCCCCCccccCeeEEcc
Q psy8342 186 MNRLTR--DDFLGMVELSLLNLPRESDGCVIHNKKYILR 222 (225)
Q Consensus 186 ~d~~~~--d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~ 222 (225)
++.+++ +++||++.++|.++.... . .+||+|+
T Consensus 96 ~d~~~~~~~~~lG~~~i~l~~l~~~~-~----~~W~~Lq 129 (129)
T 2bwq_A 96 QARVREEESEFLGEILIELETALLDD-E----PHWYKLQ 129 (129)
T ss_dssp C-------CEEEEEEEEEGGGCCCSS-C----EEEEECC
T ss_pred CCcCcCcCCceeEEEEEEccccCCCc-C----CccEECc
Confidence 999987 999999999999987643 3 8999996
No 25
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.79 E-value=2e-19 Score=132.96 Aligned_cols=106 Identities=22% Similarity=0.340 Sum_probs=91.3
Q ss_pred CCCccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCCccCcccCceec-CCCCCeeccEEEEEecCCCcEEEEEEEEccC
Q psy8342 111 EEPTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQTIDSALTKTRK-KTLNPVWNEEFIFRVKPSEHKLVFQVFDMNR 188 (225)
Q Consensus 111 ~~~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~~~~~~kT~v~~-~~~~P~Wne~f~f~v~~~~~~L~v~V~d~d~ 188 (225)
....+.|.|+|++|++|+.++..|. ++|+.+..+.. +++|++++ +++||+|||+|.|.+......|.|+|||++.
T Consensus 6 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~---~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~ 82 (136)
T 1wfj_A 6 SGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQ---DQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDV 82 (136)
T ss_dssp CCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSC---EEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSS
T ss_pred CCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCc---cceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCC
Confidence 4467999999999999999998887 88888877754 57899998 8999999999999999877899999999999
Q ss_pred CCCCceeEEEEEECcccCCCCCCccccCeeEEcc
Q psy8342 189 LTRDDFLGMVELSLLNLPRESDGCVIHNKKYILR 222 (225)
Q Consensus 189 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~ 222 (225)
+++|++||++.|+|.++.... .....||+|.
T Consensus 83 ~~~d~~lG~~~i~l~~l~~~~---~~~~~w~~L~ 113 (136)
T 1wfj_A 83 GTEDDAVGEATIPLEPVFVEG---SIPPTAYNVV 113 (136)
T ss_dssp CTTTCCSEEEEEESHHHHHHS---EEEEEEEEEE
T ss_pred CCCCceEEEEEEEHHHhccCC---CCCcEEEEee
Confidence 999999999999999994321 1227899986
No 26
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.79 E-value=2.3e-19 Score=132.81 Aligned_cols=107 Identities=21% Similarity=0.263 Sum_probs=88.6
Q ss_pred CccceeEeeeeeecCCcCCCCC------------CeeEEEEeCCCCccCcccCceecCCCCCeeccEEEEEecCCCcEEE
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFG------------ARIDLNTVNGDQTIDSALTKTRKKTLNPVWNEEFIFRVKPSEHKLV 180 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g------------~~~~~~~~~~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~~~~L~ 180 (225)
..+.|.|+|++|++|+.+|.++ .++|+.+..+... ..+|+++++++||+|||+|.|.+... ..|.
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~--~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~ 80 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSR--IGQTATKQKTNSPAWHDEFVTDVCNG-RKIE 80 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEE--EEECCCCSSCSSCEEEEEEEEEEEEE-CEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeE--eeeeeEECCCcCCccCCEEEEEecCC-CEEE
Confidence 3588999999999999877432 3888887765432 46899999999999999999999765 7899
Q ss_pred EEEEEccCCCCCceeEEEEEECcccCCCCCCccccCeeEEcccC
Q psy8342 181 FQVFDMNRLTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRPR 224 (225)
Q Consensus 181 v~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~pr 224 (225)
|+|||+|.+++|+|||.+.|+|.++...... ..+.||.|+|+
T Consensus 81 ~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~--~~~~w~~L~~~ 122 (136)
T 1gmi_A 81 LAVFHDAPIGYDDFVANCTIQFEELLQNGSR--HFEDWIDLEPE 122 (136)
T ss_dssp EEEEECCSSSSCEEEEEEEEEHHHHTSTTCS--EEEEEEECBSS
T ss_pred EEEEeCCCCCCCCEEEEEEEEHHHhcccCCC--CccEEEEcCCC
Confidence 9999999999999999999999999865321 12789999985
No 27
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.79 E-value=4.8e-19 Score=134.46 Aligned_cols=108 Identities=21% Similarity=0.295 Sum_probs=88.4
Q ss_pred CccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCC--ccCcccCceecCCCCCeeccEEEEEecCC---CcEEEEEEEEc
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQ--TIDSALTKTRKKTLNPVWNEEFIFRVKPS---EHKLVFQVFDM 186 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~--~~~~~kT~v~~~~~~P~Wne~f~f~v~~~---~~~L~v~V~d~ 186 (225)
..+.|.|+|++|++|+.++.+|. ++|+.+..+.. ...+++|+++++++||+|||+|.|.+... ...|.|+|||+
T Consensus 23 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 102 (159)
T 1tjx_A 23 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 102 (159)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEEC
Confidence 46799999999999999998887 88887655422 22468999999999999999999998754 36799999999
Q ss_pred cCCCCCceeEEEEEECcccC------------CCCCCccccCeeEEcccC
Q psy8342 187 NRLTRDDFLGMVELSLLNLP------------RESDGCVIHNKKYILRPR 224 (225)
Q Consensus 187 d~~~~d~~lG~~~i~l~~l~------------~~~~~~~~~~~w~~L~pr 224 (225)
+.+++++|||.+.|+|..+. .+.. ..+||.|.++
T Consensus 103 d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~----~~~W~~L~~~ 148 (159)
T 1tjx_A 103 DKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRP----IAQWHTLQVE 148 (159)
T ss_dssp CSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCC----EEEEEECBCH
T ss_pred CCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCe----eeeEEECcCc
Confidence 99999999999999999642 1222 2799999975
No 28
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.78 E-value=5e-19 Score=130.91 Aligned_cols=111 Identities=25% Similarity=0.369 Sum_probs=88.3
Q ss_pred CccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCC--ccCcccCceecCCCCCeeccEEEEEecCCC---cEEEEEEEEc
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQ--TIDSALTKTRKKTLNPVWNEEFIFRVKPSE---HKLVFQVFDM 186 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~--~~~~~kT~v~~~~~~P~Wne~f~f~v~~~~---~~L~v~V~d~ 186 (225)
..+.|.|.|++|++|+.++..|. ++|+.+..+.. ...+++|+++++++||+|||+|.|.+.... ..|.|+|||+
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~ 93 (138)
T 3n5a_A 14 SANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDK 93 (138)
T ss_dssp TTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEEC
T ss_pred CCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEEC
Confidence 46899999999999999998877 77776655422 234689999999999999999999987654 6899999999
Q ss_pred cCCCCCceeEEEEEECcccCCCCC--------CccccCeeEEccc
Q psy8342 187 NRLTRDDFLGMVELSLLNLPRESD--------GCVIHNKKYILRP 223 (225)
Q Consensus 187 d~~~~d~~lG~~~i~l~~l~~~~~--------~~~~~~~w~~L~p 223 (225)
+.+++++|||++.|+|+++..+.. ......+|+.|+|
T Consensus 94 ~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~p 138 (138)
T 3n5a_A 94 DKLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQPVAQWHQLKA 138 (138)
T ss_dssp CSSSCCEEEEEEEESSSSCHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred CCCCCCcEEEEEEEccccCChHHHHHHHHHhCCCCeEEEEeecCC
Confidence 999999999999999996542100 0111278999987
No 29
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.78 E-value=1.1e-18 Score=128.34 Aligned_cols=105 Identities=27% Similarity=0.410 Sum_probs=87.5
Q ss_pred ccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCCccCcccCceecCCCCCeeccEEEEEecCCCcEEEEEEEEccCCCC-
Q psy8342 114 TEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQTIDSALTKTRKKTLNPVWNEEFIFRVKPSEHKLVFQVFDMNRLTR- 191 (225)
Q Consensus 114 ~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~~~~L~v~V~d~d~~~~- 191 (225)
...|.|+|++|++|+.+|..|. ++|+.+..+.. ..+++|+++++++||+|||+|.|.+.... .|.|+|||++.+++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~-~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~~~ 81 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS-GQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIHKK 81 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTT-CCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTTSS
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCC-CceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCCCC
Confidence 4679999999999999998887 88887766532 24789999999999999999999998765 59999999999876
Q ss_pred --CceeEEEEEECcccCC-CCCCccccCeeEEcccC
Q psy8342 192 --DDFLGMVELSLLNLPR-ESDGCVIHNKKYILRPR 224 (225)
Q Consensus 192 --d~~lG~~~i~l~~l~~-~~~~~~~~~~w~~L~pr 224 (225)
|+|||++.|+++++.. .... ..||.|..+
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~~~~----~~~~~L~~~ 113 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLKDTG----YQRLDLCKL 113 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHTTSC----CEEEECBCS
T ss_pred CCCCceEEEEEeHHHhhcccccC----cEEEeeeec
Confidence 7999999999998832 2222 688998765
No 30
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.77 E-value=2.6e-18 Score=131.33 Aligned_cols=113 Identities=23% Similarity=0.242 Sum_probs=88.6
Q ss_pred CccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCC--ccCcccCceecCCCCCeeccEEEEEecCC---CcEEEEEEEEc
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQ--TIDSALTKTRKKTLNPVWNEEFIFRVKPS---EHKLVFQVFDM 186 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~--~~~~~kT~v~~~~~~P~Wne~f~f~v~~~---~~~L~v~V~d~ 186 (225)
..+.|.|+|++|++|+.++.+|. ++|+.+..+.. ...+++|+++++++||+|||+|.|.+... ...|.|+|||+
T Consensus 35 ~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 114 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDY 114 (166)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEEC
Confidence 46899999999999999998887 78887655432 23478999999999999999999999753 36899999999
Q ss_pred cCCCCCceeEEEEEECcccCCCC--------CCccccCeeEEcccCC
Q psy8342 187 NRLTRDDFLGMVELSLLNLPRES--------DGCVIHNKKYILRPRR 225 (225)
Q Consensus 187 d~~~~d~~lG~~~i~l~~l~~~~--------~~~~~~~~w~~L~prs 225 (225)
+.+++++|||++.|+|.++..+. .......+|+.|++++
T Consensus 115 d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~~~~ 161 (166)
T 2cm5_A 115 DIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNEN 161 (166)
T ss_dssp CSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCCEEEEEECBC--
T ss_pred CCCCCCcEEEeEEEecccCCchhHHHHHHHhCCCCcceEeeECCCcc
Confidence 99999999999999999853110 0011127999998763
No 31
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.77 E-value=1.4e-18 Score=129.39 Aligned_cols=107 Identities=23% Similarity=0.328 Sum_probs=89.7
Q ss_pred CccceeEeeeeeecCCcCCCCCC-eeEEEEeCCC--CccCcccCceecCCCCCeeccEEEEE-ecCC---CcEEEEEEEE
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGD--QTIDSALTKTRKKTLNPVWNEEFIFR-VKPS---EHKLVFQVFD 185 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~--~~~~~~kT~v~~~~~~P~Wne~f~f~-v~~~---~~~L~v~V~d 185 (225)
..+.|.|+|++|++|+.++..|. ++|+.+..+. ....+++|+++++++||+|||+|.|. +... ...|.|+|||
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 106 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCD 106 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEE
Confidence 46889999999999999998887 7887765543 22347899999999999999999998 5432 2689999999
Q ss_pred ccCCCCCceeEEEEEECcccCCCCCCccccCeeEEccc
Q psy8342 186 MNRLTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRP 223 (225)
Q Consensus 186 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~p 223 (225)
++.++++++||++.|+|.++..+... ..|+.|++
T Consensus 107 ~d~~~~d~~iG~~~i~l~~l~~~~~~----~~~~~L~~ 140 (142)
T 2chd_A 107 EDKFGHNEFIGETRFSLKKLKANQRK----NFNICLER 140 (142)
T ss_dssp ECTTSCEEEEEEEEEEGGGCCTTCCE----EEEEECBC
T ss_pred CCCCCCCcEEEEEEEEHHHcCCCCcc----EEEEeccc
Confidence 99999999999999999999876544 78888875
No 32
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.75 E-value=3e-18 Score=129.23 Aligned_cols=92 Identities=24% Similarity=0.342 Sum_probs=73.7
Q ss_pred CccceeEeeeeeecCCcCCCCCC-eeEEEEeCC--CCccCcccCceecCCCCCeeccEEEEEecCCC---cEEEEEEEEc
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNG--DQTIDSALTKTRKKTLNPVWNEEFIFRVKPSE---HKLVFQVFDM 186 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~--~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~~---~~L~v~V~d~ 186 (225)
..+.|.|+|++|++|+.++.+|. ++|+.+... .....+++|+++++++||+|||+|.|.+.... ..|.|+|||+
T Consensus 28 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~ 107 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDS 107 (153)
T ss_dssp TTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeC
Confidence 45899999999999999998887 788876553 22223679999999999999999999997653 6899999999
Q ss_pred cCCCCCceeEEEEEECcc
Q psy8342 187 NRLTRDDFLGMVELSLLN 204 (225)
Q Consensus 187 d~~~~d~~lG~~~i~l~~ 204 (225)
+.+++++|||++.|+|.+
T Consensus 108 d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 108 ERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp CTTSCCEEEEEEEESTTC
T ss_pred CCCCCCcEEEEEEECCCC
Confidence 999999999999999988
No 33
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.75 E-value=9.4e-18 Score=138.65 Aligned_cols=108 Identities=26% Similarity=0.361 Sum_probs=93.0
Q ss_pred CccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCCccCcccCceecCCCCCeeccEEEEEecCC---CcEEEEEEEEccC
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQTIDSALTKTRKKTLNPVWNEEFIFRVKPS---EHKLVFQVFDMNR 188 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~---~~~L~v~V~d~d~ 188 (225)
..+.|.|+|++|++|+.++.+|. ++|+.+..+.....+++|+++++++||+|||+|.|.+... ...|.|+|||++.
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~ 96 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDR 96 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCS
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCC
Confidence 46899999999999999998887 8888776654434478899999999999999999998753 3789999999999
Q ss_pred CCCCceeEEEEEECcccCCCCCCccccCeeEEcccC
Q psy8342 189 LTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRPR 224 (225)
Q Consensus 189 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~pr 224 (225)
+++++|||++.++|.++..+... ..||.|.++
T Consensus 97 ~~~~~~lG~~~i~l~~l~~~~~~----~~w~~L~~~ 128 (284)
T 2r83_A 97 FSKHDIIGEFKVPMNTVDFGHVT----EEWRDLQSA 128 (284)
T ss_dssp SSCCCEEEEEEEEGGGCCCSSCE----EEEEECBCC
T ss_pred CCCCceeEEEEEcchhcccCCcc----eeEEEeecc
Confidence 99999999999999999876544 799999864
No 34
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.75 E-value=5.5e-18 Score=130.54 Aligned_cols=110 Identities=21% Similarity=0.278 Sum_probs=87.4
Q ss_pred CCCccceeEeeeeeecCC-cCCCCCCeeEEEEeCCCCccCcccCceecCCCCCeeccEEEEEecCCCcEEEEEEEEccCC
Q psy8342 111 EEPTEQIRLRIIAGHSLA-KKDIFGARIDLNTVNGDQTIDSALTKTRKKTLNPVWNEEFIFRVKPSEHKLVFQVFDMNRL 189 (225)
Q Consensus 111 ~~~~~~l~v~vi~a~~L~-~~d~~g~~~~~~~~~~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~~~~L~v~V~d~d~~ 189 (225)
....+.|.|+|++|++|+ ..+..+.++|+.+..+. .+++|+++++++||+|||+|.|.+.. ...|.|+|||+|.+
T Consensus 32 ~~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~---~~~kT~v~~~tlnP~Wne~f~f~v~~-~~~L~~~V~D~d~~ 107 (173)
T 2nq3_A 32 LTMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDG---QSKKTEKCNNTNSPKWKQPLTVIVTP-VSKLHFRVWSHQTL 107 (173)
T ss_dssp CSCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETT---EEEECCCCSSCSSCEEEEEEEEEECT-TCEEEEEEEECCSS
T ss_pred cCCceEEEEEEEEeECCCCcccCCCCCeEEEEEECC---EEeEccccCCCCCCeECCEEEEEeCC-CCEEEEEEEECCCC
Confidence 345688999999999999 44444448888877664 37899999999999999999999964 67999999999999
Q ss_pred CCCceeEEEEEECcccCCCCCCc-cccCeeEEcccC
Q psy8342 190 TRDDFLGMVELSLLNLPRESDGC-VIHNKKYILRPR 224 (225)
Q Consensus 190 ~~d~~lG~~~i~l~~l~~~~~~~-~~~~~w~~L~pr 224 (225)
++++|||++.|+|.++..+.... .....|+.|.++
T Consensus 108 ~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~ 143 (173)
T 2nq3_A 108 KSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGD 143 (173)
T ss_dssp SCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEES
T ss_pred CCCceEEEEEEEHHHhcccCCCCcceeEEEEECccC
Confidence 99999999999999987543211 111569999764
No 35
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.70 E-value=5.8e-17 Score=119.23 Aligned_cols=86 Identities=15% Similarity=0.266 Sum_probs=71.7
Q ss_pred ccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCCccCcccCceec-CCCCCeeccEEEEEecCCCcEEEEEEEEccCCCC
Q psy8342 114 TEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQTIDSALTKTRK-KTLNPVWNEEFIFRVKPSEHKLVFQVFDMNRLTR 191 (225)
Q Consensus 114 ~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~~~~~~kT~v~~-~~~~P~Wne~f~f~v~~~~~~L~v~V~d~d~~~~ 191 (225)
.+.|.|+|++|+++.. .|. ++|+.+. + . ..+|++++ +++||+|||+|.|.+...+..|.|+|||+| +++
T Consensus 4 ~~~L~V~V~~A~~l~~---~g~~DPYv~v~-~-~---~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~ 74 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA---QEKFNTYVTLK-V-Q---NVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIW 74 (131)
T ss_dssp CEEEEEEEEEEECSSC---GGGCEEEEEEE-E-T---TEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSC
T ss_pred ceEEEEEEEEeECCCC---CCCcCeEEEEE-e-c---CEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCC
Confidence 5789999999998853 444 8888876 2 1 34565555 799999999999999987788999999999 889
Q ss_pred CceeEEEEEECcccCCC
Q psy8342 192 DDFLGMVELSLLNLPRE 208 (225)
Q Consensus 192 d~~lG~~~i~l~~l~~~ 208 (225)
|+|||++.|+|.++...
T Consensus 75 dd~iG~~~i~l~~l~~~ 91 (131)
T 2cjt_A 75 DTMVGTVWIPLRTIRQS 91 (131)
T ss_dssp EEEEEEEEEEGGGSCBC
T ss_pred CCeEEEEEEEHHHhhhc
Confidence 99999999999998744
No 36
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.67 E-value=4.2e-16 Score=129.70 Aligned_cols=111 Identities=30% Similarity=0.400 Sum_probs=88.6
Q ss_pred CCCccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCCccCcccCceecCCCCCeeccEEEEEecCC---CcEEEEEEEEc
Q psy8342 111 EEPTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQTIDSALTKTRKKTLNPVWNEEFIFRVKPS---EHKLVFQVFDM 186 (225)
Q Consensus 111 ~~~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~---~~~L~v~V~d~ 186 (225)
....+.|.|+|++|++|+.+|.+|. ++|+.+........+++|+++++++||+|||+|.|.+... ...|.|+|||+
T Consensus 16 ~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~ 95 (296)
T 1dqv_A 16 LYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDF 95 (296)
T ss_dssp CSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEEC
T ss_pred eCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEc
Confidence 3456899999999999999998887 8888877643333478999999999999999999998643 35899999999
Q ss_pred cCCCCCceeEEEEEE-CcccCCCCCCccccCeeEEcccC
Q psy8342 187 NRLTRDDFLGMVELS-LLNLPRESDGCVIHNKKYILRPR 224 (225)
Q Consensus 187 d~~~~d~~lG~~~i~-l~~l~~~~~~~~~~~~w~~L~pr 224 (225)
|.+++++|||++.++ +.++...... ...|+.|.++
T Consensus 96 d~~~~~~~iG~~~i~~l~~~~~~~~~---~~~w~~L~~~ 131 (296)
T 1dqv_A 96 DRFSRHDLIGQVVLDNLLELAEQPPD---RPLWRDILEG 131 (296)
T ss_dssp CSSSCCCEEEEEECCCTTGGGSSCSS---CCCCEECBCC
T ss_pred CCCCCCceEEEEEeccccccccCCcc---ceeeeccccc
Confidence 999999999999996 4444432111 2689999764
No 37
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.67 E-value=2.2e-16 Score=130.40 Aligned_cols=111 Identities=22% Similarity=0.288 Sum_probs=88.1
Q ss_pred CccceeEeeeeeecCCcCCCCCC-eeEEEEeCCC--CccCcccCceecCCCCCeeccEEEEEecCCC---cEEEEEEEEc
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGD--QTIDSALTKTRKKTLNPVWNEEFIFRVKPSE---HKLVFQVFDM 186 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~--~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~~---~~L~v~V~d~ 186 (225)
..+.|.|.|++|++|+.++.+|. ++|+.+.... ....+++|+++++++||+|||+|.|.+...+ ..|.|+|||+
T Consensus 148 ~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 227 (284)
T 2r83_A 148 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 227 (284)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEEC
T ss_pred cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeC
Confidence 45789999999999999998887 7777665431 2234689999999999999999999997653 5799999999
Q ss_pred cCCCCCceeEEEEEECcccCCC---------CCCccccCeeEEcccC
Q psy8342 187 NRLTRDDFLGMVELSLLNLPRE---------SDGCVIHNKKYILRPR 224 (225)
Q Consensus 187 d~~~~d~~lG~~~i~l~~l~~~---------~~~~~~~~~w~~L~pr 224 (225)
+.++++++||++.|+|+.+..+ .+. ....+||.|+|+
T Consensus 228 d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~-~~~~~W~~L~~~ 273 (284)
T 2r83_A 228 DKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPR-RPIAQWHTLQVE 273 (284)
T ss_dssp CSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTT-SCEEEEEECBCH
T ss_pred CCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCC-CchheeeecCCc
Confidence 9999999999999999864221 111 112799999985
No 38
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.66 E-value=2.3e-16 Score=144.95 Aligned_cols=109 Identities=18% Similarity=0.352 Sum_probs=95.0
Q ss_pred CCCccceeEeeeeeecCCc---CCCCCC-eeEEEEeCCCCccCcccCceecCCCCCeeccEEEEEecC-CCcEEEEEEEE
Q psy8342 111 EEPTEQIRLRIIAGHSLAK---KDIFGA-RIDLNTVNGDQTIDSALTKTRKKTLNPVWNEEFIFRVKP-SEHKLVFQVFD 185 (225)
Q Consensus 111 ~~~~~~l~v~vi~a~~L~~---~d~~g~-~~~~~~~~~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~-~~~~L~v~V~d 185 (225)
....+.|.|+|++|++|+. +|..|. ++|+.+..+.....+++|+++++++||+|||+|.|.+.. ....|.|+|||
T Consensus 14 ~~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D 93 (749)
T 1cjy_A 14 HQYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMD 93 (749)
T ss_dssp CCCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEE
T ss_pred CCCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEE
Confidence 3467899999999999998 787777 899988777544457899999999999999999999986 35789999999
Q ss_pred ccCCCCCceeEEEEEECcccCCCCCCccccCeeEEcccC
Q psy8342 186 MNRLTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRPR 224 (225)
Q Consensus 186 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~pr 224 (225)
+|.++ +++||++.|+|.+|..+... ..||+|+|+
T Consensus 94 ~D~~~-ddfIG~v~I~L~~L~~g~~~----~~w~~L~~~ 127 (749)
T 1cjy_A 94 ANYVM-DETLGTATFTVSSMKVGEKK----EVPFIFNQV 127 (749)
T ss_dssp CCSSS-CEEEEEECCBSTTSCTTCCC----CEEEEETTT
T ss_pred CCCCC-CceeEEEEEEHHHcCCCCce----EEEEecCCC
Confidence 99999 99999999999999876554 899999875
No 39
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.64 E-value=9.4e-16 Score=117.27 Aligned_cols=87 Identities=15% Similarity=0.247 Sum_probs=72.9
Q ss_pred CccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCCccCcccCceec-CCCCCeeccEEEEEecCCCcEEEEEEEEccCCC
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQTIDSALTKTRK-KTLNPVWNEEFIFRVKPSEHKLVFQVFDMNRLT 190 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~~~~~~kT~v~~-~~~~P~Wne~f~f~v~~~~~~L~v~V~d~d~~~ 190 (225)
..+.|.|+|++|+++. ..|. ++|+.+. + . ..+|++++ +++||+|||+|.|.+...+..|.|+|||+| ++
T Consensus 12 ~~~~L~V~V~~A~~l~---~~g~~DPYV~v~-~-~---~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~ 82 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG---AQEKFNTYVTLK-V-Q---NVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LI 82 (167)
T ss_dssp CCCEEEEEEEEEECSS---CGGGCEEEEEEE-E-T---TEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SS
T ss_pred ceEEEEEEEEEEECCC---CCCCCCeEEEEE-e-c---ceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CC
Confidence 4679999999999884 2444 8888876 2 1 45666665 699999999999999987788999999999 88
Q ss_pred CCceeEEEEEECcccCCC
Q psy8342 191 RDDFLGMVELSLLNLPRE 208 (225)
Q Consensus 191 ~d~~lG~~~i~l~~l~~~ 208 (225)
+|+|||++.|+|.++...
T Consensus 83 ~dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 83 WDTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp CCEEEEEEEEEGGGSCBC
T ss_pred CCceEEEEEEEHHHhccc
Confidence 999999999999998654
No 40
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.62 E-value=7.4e-16 Score=137.07 Aligned_cols=109 Identities=25% Similarity=0.356 Sum_probs=91.6
Q ss_pred CccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCCccCcccCceecCCCCCeeccEEEEEecCCC-cEEEEEEEEccCCC
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQTIDSALTKTRKKTLNPVWNEEFIFRVKPSE-HKLVFQVFDMNRLT 190 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~~-~~L~v~V~d~d~~~ 190 (225)
..+.|.|+|++|++|+.+|.+|. ++|+.+..+.. +++|+++++++||+|||+|.|.+.... ..|.|+|||+|.++
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~---~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~ 461 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQ---SYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFS 461 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTE---EEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSS
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECCe---eccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCC
Confidence 55789999999999999998888 88888777643 689999999999999999999997654 68999999999999
Q ss_pred CCceeEEEEEECcccCCCCCCccccCeeEEcccC
Q psy8342 191 RDDFLGMVELSLLNLPRESDGCVIHNKKYILRPR 224 (225)
Q Consensus 191 ~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~pr 224 (225)
+|+|||++.++|.++..+.........|+.|.+.
T Consensus 462 ~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~ 495 (510)
T 3jzy_A 462 PDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV 495 (510)
T ss_dssp SCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS
T ss_pred CCCceEEEEEEHHHhccccCCCCceeeeecCCCC
Confidence 9999999999999998653321223789998754
No 41
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.59 E-value=6.1e-16 Score=128.73 Aligned_cols=112 Identities=19% Similarity=0.254 Sum_probs=89.9
Q ss_pred CccceeEeeeeeecCCcCCCCCC-eeEEEEeCCC--CccCcccCceecCCCCCeeccEEEEEecCCC---cEEEEEEEEc
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGD--QTIDSALTKTRKKTLNPVWNEEFIFRVKPSE---HKLVFQVFDM 186 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~--~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~~---~~L~v~V~d~ 186 (225)
..+.|.|.|++|++|+.+|..|. ++|+.+.... ....+++|+++++++||+|||+|.|.+.... ..|.|+|||+
T Consensus 150 ~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 229 (296)
T 1dqv_A 150 TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDY 229 (296)
T ss_dssp TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEEC
T ss_pred ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeC
Confidence 45889999999999999998887 8888877652 2245789999999999999999999987642 5799999999
Q ss_pred cCCCCCceeEEEEEECcccCC-C--------CCCccccCeeEEcccC
Q psy8342 187 NRLTRDDFLGMVELSLLNLPR-E--------SDGCVIHNKKYILRPR 224 (225)
Q Consensus 187 d~~~~d~~lG~~~i~l~~l~~-~--------~~~~~~~~~w~~L~pr 224 (225)
+.++++++||.+.|+++++.. + ........+|+.|.+.
T Consensus 230 d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 230 DCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp CSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred CCCCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 999999999999999997643 0 0011123789998864
No 42
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.57 E-value=7.2e-15 Score=131.04 Aligned_cols=100 Identities=22% Similarity=0.183 Sum_probs=84.2
Q ss_pred CCccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCCccCcccCceecCCCCCeeccEEEEEecC--CCcEEEEEEEEccC
Q psy8342 112 EPTEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQTIDSALTKTRKKTLNPVWNEEFIFRVKP--SEHKLVFQVFDMNR 188 (225)
Q Consensus 112 ~~~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~--~~~~L~v~V~d~d~ 188 (225)
...+.|.|+|++|++|+. |.+|. ++|+.+..+.. +++|+++++++||+|||+|.|.+.. ....|.|+|||+|.
T Consensus 391 ~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~---~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~ 466 (540)
T 3nsj_A 391 RGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQ---EFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY 466 (540)
T ss_dssp TTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTE---EEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS
T ss_pred CcccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCE---eeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC
Confidence 346889999999999998 88887 99998877643 5899999999999999999998643 46789999999999
Q ss_pred CCCCceeEEEEEECcccCCCCCCccccCeeEEccc
Q psy8342 189 LTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRP 223 (225)
Q Consensus 189 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~p 223 (225)
+++|||||++.++|.. +. ...|+.|.+
T Consensus 467 ~~~dD~LG~~~~~L~~---g~-----~~~~~~l~~ 493 (540)
T 3nsj_A 467 GWDDDLLGSCDRSPHS---GF-----HEVTCELNH 493 (540)
T ss_dssp SSCCEEEEEEEECCCS---EE-----EEEEEECSS
T ss_pred CCCCCEEEEEEEEeeC---Cc-----EEEEEEcCC
Confidence 9999999999999872 21 267887764
No 43
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.54 E-value=2.6e-14 Score=129.84 Aligned_cols=104 Identities=25% Similarity=0.382 Sum_probs=86.3
Q ss_pred CccceeEeeeeeecCCcCCC--CCC-eeEEEEeC-CC-CccCcccCceecCC-CCCeeccEEEEEecCCC-cEEEEEEEE
Q psy8342 113 PTEQIRLRIIAGHSLAKKDI--FGA-RIDLNTVN-GD-QTIDSALTKTRKKT-LNPVWNEEFIFRVKPSE-HKLVFQVFD 185 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~--~g~-~~~~~~~~-~~-~~~~~~kT~v~~~~-~~P~Wne~f~f~v~~~~-~~L~v~V~d 185 (225)
..+.|.|+|++|++|+..+. .|. ++|+.+.. +. ....+++|++++++ +||+|||+|.|.+..++ ..|.|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 56889999999999998874 455 78876655 31 12236799999987 99999999999998765 689999999
Q ss_pred ccCCCCCceeEEEEEECcccCCCCCCccccCeeEEccc
Q psy8342 186 MNRLTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRP 223 (225)
Q Consensus 186 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~p 223 (225)
+|.+++++|||++.|+|..|..+ ..|++|..
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G-------~r~v~L~d 605 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQG-------YRHVHLLS 605 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCE-------EEEEEEEC
T ss_pred cCCCCCCceeEEEEEEHHHcCCC-------cEEEeCCC
Confidence 99999999999999999999876 56888854
No 44
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.46 E-value=4.2e-15 Score=131.55 Aligned_cols=100 Identities=19% Similarity=0.333 Sum_probs=14.0
Q ss_pred CccceeEeeeeeecCCcCCCCCCeeEEEEeCCCCccCcccCceecCC---CCCeeccEEEEEecCCCcEEEEEEEE-cc-
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGARIDLNTVNGDQTIDSALTKTRKKT---LNPVWNEEFIFRVKPSEHKLVFQVFD-MN- 187 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~~~~~~~~~~~~~~~~~kT~v~~~~---~~P~Wne~f~f~v~~~~~~L~v~V~d-~d- 187 (225)
..+.|.|+|++|++|+.+| ++|+.+..+... ..||++++++ +||+|||+|.|.+.+....|.|+||| +|
T Consensus 9 ~~~~L~V~VieAk~L~~~d----dpYv~v~l~~~~--~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~ 82 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK----RYYCELCLDDML--YARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDK 82 (483)
T ss_dssp EEECC---------------------------------------------------CCEECC------------------
T ss_pred eccEEEEEEEEcCCcCCCC----CCeEEEEECCeE--EeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCc
Confidence 4578999999999999887 667766655432 4689999999 99999999999976555789999999 45
Q ss_pred --CCCCCceeEEEEEECcccCCCCCCccccCeeEEcc
Q psy8342 188 --RLTRDDFLGMVELSLLNLPRESDGCVIHNKKYILR 222 (225)
Q Consensus 188 --~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~ 222 (225)
.+++++|||.+.|++.++..+... ..||+|.
T Consensus 83 ~~~~~~d~~lG~v~i~l~~l~~~~~~----~~W~~L~ 115 (483)
T 3bxj_A 83 KRKKDKAGYVGLVTVPVATLAGRHFT----EQWYPVT 115 (483)
T ss_dssp ------------------------CC----EECC---
T ss_pred cccCCCCceEEEEEEEHHHhcCCCCC----CeEEECC
Confidence 367899999999999999876544 8999995
No 45
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.45 E-value=3.7e-13 Score=98.74 Aligned_cols=90 Identities=13% Similarity=0.169 Sum_probs=74.1
Q ss_pred CCccceeEeeeeeecCCcCCCCCCeeEEEEeCCCCccCcccCceec-CCCCCeeccEEEEEecCC---CcEEEEEEEEcc
Q psy8342 112 EPTEQIRLRIIAGHSLAKKDIFGARIDLNTVNGDQTIDSALTKTRK-KTLNPVWNEEFIFRVKPS---EHKLVFQVFDMN 187 (225)
Q Consensus 112 ~~~~~l~v~vi~a~~L~~~d~~g~~~~~~~~~~~~~~~~~kT~v~~-~~~~P~Wne~f~f~v~~~---~~~L~v~V~d~d 187 (225)
...+.|+|.|.+|.+|+.+. ++++.+.+. ..++||++++ ++.||+|||.|.|++..+ +..|.|.|||++
T Consensus 18 ~~~msL~V~l~~a~~Lpg~~----Dp~akv~FR---g~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~ 90 (144)
T 3l9b_A 18 GSHMALIVHLKTVSELRGRA----DRIAKVTFR---GQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYS 90 (144)
T ss_dssp -CCEEEEEEEEEEESCCSCE----EEEEEEEET---TEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEEC
T ss_pred CCcEEEEEEEEEecCCCCCC----CCeEEEEEe---ccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECc
Confidence 34578999999999999421 565555443 2378999998 699999999999999853 489999999999
Q ss_pred CCCCCceeEEEEEECcccCCC
Q psy8342 188 RLTRDDFLGMVELSLLNLPRE 208 (225)
Q Consensus 188 ~~~~d~~lG~~~i~l~~l~~~ 208 (225)
+++++++||++.++|+++...
T Consensus 91 ~v~~nrlIG~~~i~Lq~lv~~ 111 (144)
T 3l9b_A 91 KVFSNKLIGTFRMVLQKVVEE 111 (144)
T ss_dssp TTSCCEEEEEEEEESHHHHHH
T ss_pred cccCCCEEEEEEEEhHHhccC
Confidence 999999999999999988754
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.39 E-value=6.5e-13 Score=122.02 Aligned_cols=105 Identities=25% Similarity=0.400 Sum_probs=87.5
Q ss_pred ccceeEeeeeeecCCcCCCCCC-eeEEEEeC--CCCccCcccCceecCCCCCeeccEEEEEecCC--CcEEEEEEEEccC
Q psy8342 114 TEQIRLRIIAGHSLAKKDIFGA-RIDLNTVN--GDQTIDSALTKTRKKTLNPVWNEEFIFRVKPS--EHKLVFQVFDMNR 188 (225)
Q Consensus 114 ~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~--~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~--~~~L~v~V~d~d~ 188 (225)
.+.|.|.+++|++|..+|.+|. ++|+.+.. +.....+.+|+++++++||+|||+|.|.+... ...|.|+|||+|.
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 4678899999999999999888 77775544 22233478999999999999999999998754 3679999999999
Q ss_pred CCCCceeEEEEEECcccCCCCCCccccCeeEEccc
Q psy8342 189 LTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRP 223 (225)
Q Consensus 189 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~p 223 (225)
++++++||.+.++|.++.... . ..||.|..
T Consensus 251 ~~~dd~iG~~~i~l~~l~~~~-~----~~w~~Lls 280 (674)
T 3pfq_A 251 TSRNDFMGSLSFGISELQKAG-V----DGWFKLLS 280 (674)
T ss_dssp SSCCEECCBCCCBTTHHHHCC-E----EEEEECBC
T ss_pred ccccccccccccchhhhccCC-c----ccceeecc
Confidence 999999999999999997543 2 78998864
No 47
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=99.38 E-value=4.6e-13 Score=91.23 Aligned_cols=81 Identities=26% Similarity=0.386 Sum_probs=63.1
Q ss_pred cCCCCCccccccCcccCCCCCeEEEeCCCCc--eeecCCcccccCccccCCCCCCCceeeeeCCCCcEEEeeecceeeec
Q psy8342 18 LSDHETNLEVSRHRESADPDSWIIVDASTES--IVETPAQPLFIGGVEQQGALPPGWEERTDANGRTYYVNHIARCTQWE 95 (225)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~ 95 (225)
+.+....||++ |+++.++.|.+||-++... +|..|+............+||+||+++.+..|++||+||.++.++|.
T Consensus 6 ~~~~~~~LP~g-We~~~~~~Gr~Yy~n~~t~~t~W~~P~~~~~~~~~~~~~~LP~gWe~~~~~~G~~Yy~nh~t~~ttw~ 84 (88)
T 1tk7_A 6 HMDALGPLPDG-WEKKIQSDNRVYFVNHKNRTTQWEDPRTQGQEVSLINEGPLPPGWEIRYTAAGERFFVDHNTRRTTFE 84 (88)
T ss_dssp CSSTTSSSSSS-CCEEEETTTEEEEEETTTTEEEEESCCCTTTCCHHHHSCSSCSSCEEEEETTTEEEEEETTTTEEESS
T ss_pred CCCccCCCCCC-cEEEECCCCCEEEEECCCCCeEeecccccccccccccccccCCceEEEECCCCCEEEEECCCCcEeCC
Confidence 34445568887 9999888899999887776 88888742100000135789999999999999999999999999999
Q ss_pred cccc
Q psy8342 96 RPTV 99 (225)
Q Consensus 96 ~P~~ 99 (225)
+|++
T Consensus 85 ~Prl 88 (88)
T 1tk7_A 85 DPRP 88 (88)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 9973
No 48
>2kxq_A E3 ubiquitin-protein ligase smurf2; WW, smurf2, TGF-beta, modular binding, protein BIN; NMR {Homo sapiens} PDB: 2lb0_A* 2laz_A*
Probab=99.36 E-value=1.1e-12 Score=89.65 Aligned_cols=81 Identities=27% Similarity=0.509 Sum_probs=63.9
Q ss_pred CCCCCccccccCcccCCCCCeEEEeCCCCc--eeecCCcccccCc--cccCCCCCCCceeeeeCCCCcEEEeeecceeee
Q psy8342 19 SDHETNLEVSRHRESADPDSWIIVDASTES--IVETPAQPLFIGG--VEQQGALPPGWEERTDANGRTYYVNHIARCTQW 94 (225)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w 94 (225)
.+++..||++ |+++.++.|.+||-++... +|..|..+-.+.. .....+||+||+++.+..|++||+||.++.++|
T Consensus 4 ~~~~~~LP~g-We~~~~~~Gr~YY~n~~t~~t~W~~P~~~~~~~~~~~~~~~~LP~gWe~~~~~~G~~Yy~n~~t~~t~w 82 (90)
T 2kxq_A 4 GGSPPDLPEG-YEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQF 82 (90)
T ss_dssp CSSCCSCCSS-CEEEEETTTEEEEEETTTTEEESSCSSSCSSSCSCCGGGTCCCCSSCCEEECTTSCEEEEETTTTEEES
T ss_pred CCCCCCCCCC-cEEEECCCCCEEEEECCCCeEeeecccccccccccCcccccccCCCceEEECCCCCEEEEECCCCcEec
Confidence 3445568888 9999888899999888776 7888874321111 123468999999999999999999999999999
Q ss_pred cccccc
Q psy8342 95 ERPTVH 100 (225)
Q Consensus 95 ~~P~~~ 100 (225)
++|+..
T Consensus 83 ~~Pr~~ 88 (90)
T 2kxq_A 83 TDPRLS 88 (90)
T ss_dssp SCTTTS
T ss_pred CCCCcC
Confidence 999764
No 49
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.22 E-value=8e-11 Score=109.95 Aligned_cols=96 Identities=24% Similarity=0.364 Sum_probs=72.8
Q ss_pred CccceeEeeeeeecCCcCCCCCCeeEEEEeCCC---CccCcccCceecC-CCCCeecc-EEEEE-ecCCC-cEEEEEEEE
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGARIDLNTVNGD---QTIDSALTKTRKK-TLNPVWNE-EFIFR-VKPSE-HKLVFQVFD 185 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~~~~~~~~~~~---~~~~~~kT~v~~~-~~~P~Wne-~f~f~-v~~~~-~~L~v~V~d 185 (225)
....|.|+|++|++|+.. ..++|+.+.+.. +...+++|+++++ ++||+||| +|.|. |..++ ..|.|.|||
T Consensus 723 ~~~~L~V~Visaq~L~~~---~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 723 VANALRVKVISGQFLSDR---KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CCEEEEEEEEEEESCCSS---CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEeccCccc---CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 346899999999999853 236666544321 2223579999875 69999999 69998 65444 579999999
Q ss_pred ccCCCCCceeEEEEEECcccCCCCCCccccCeeEEcc
Q psy8342 186 MNRLTRDDFLGMVELSLLNLPRESDGCVIHNKKYILR 222 (225)
Q Consensus 186 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~ 222 (225)
+| ++|||++.|||..|..| ..+++|.
T Consensus 800 ~d----ddfiG~~~lpL~~L~~G-------yR~vpL~ 825 (885)
T 3ohm_B 800 EG----GKFVGHRILPVSAIRSG-------YHYVCLR 825 (885)
T ss_dssp TT----TEEEEEEEEETTTCCCE-------EEEEEEE
T ss_pred CC----ccEEeeEEEEHHHcCCC-------ceEEEec
Confidence 87 78999999999999876 4555554
No 50
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.17 E-value=9.2e-11 Score=109.13 Aligned_cols=97 Identities=23% Similarity=0.411 Sum_probs=74.2
Q ss_pred CccceeEeeeeeecCCcCCCCCCeeEEEEeC-CC--CccCcccCc-eec-CCCCCeecc-EEEE-EecCCC-cEEEEEEE
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGARIDLNTVN-GD--QTIDSALTK-TRK-KTLNPVWNE-EFIF-RVKPSE-HKLVFQVF 184 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~~~~~~~~~-~~--~~~~~~kT~-v~~-~~~~P~Wne-~f~f-~v~~~~-~~L~v~V~ 184 (225)
..+.|.|+|++|++|+.. ..++|+.+.. |. +...+++|+ +++ +++||+||| +|.| .|..++ ..|.|.||
T Consensus 676 ~~~~L~V~Visa~~L~~~---~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~ 752 (799)
T 2zkm_X 676 VATTLSITVISGQFLSER---SVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVM 752 (799)
T ss_dssp TCEEEEEEEEEEESCCSS---CCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEE
T ss_pred eeeeEEEEEEeccccCcc---CCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEE
Confidence 457899999999999852 1266665544 31 222367899 776 569999999 7999 786554 57899999
Q ss_pred EccCCCCCceeEEEEEECcccCCCCCCccccCeeEEccc
Q psy8342 185 DMNRLTRDDFLGMVELSLLNLPRESDGCVIHNKKYILRP 223 (225)
Q Consensus 185 d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~p 223 (225)
|+| ++|||++.|||+.|..| ..|++|..
T Consensus 753 D~d----~d~iG~~~ipl~~L~~G-------~r~v~L~~ 780 (799)
T 2zkm_X 753 EEG----NKFLGHRIIPINALNSG-------YHHLCLHS 780 (799)
T ss_dssp ETT----TEEEEEEEEEGGGBCCE-------EEEEEEEC
T ss_pred EeC----CCccceEeeehhhcCCC-------cEEEeccC
Confidence 987 78999999999999876 56777753
No 51
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.16 E-value=2.2e-11 Score=70.19 Aligned_cols=35 Identities=40% Similarity=0.937 Sum_probs=32.8
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeeccccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPTV 99 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~ 99 (225)
..+||+||+.+.+..|++||+||.++.++|++|+.
T Consensus 5 ~~~LP~gWe~~~~~~Gr~Yy~nh~t~~ttW~~P~~ 39 (40)
T 2ysg_A 5 SSGLPYGWEEAYTADGIKYFINHVTQTTSWIHPVM 39 (40)
T ss_dssp SSCCCTTEEEEECSSSCEEEEESSSCCEECCCCCC
T ss_pred cCCCCCCcEEEEcCCCCEEEEECCCCcCcCCCCCC
Confidence 46899999999999999999999999999999974
No 52
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.16 E-value=1.1e-10 Score=108.42 Aligned_cols=95 Identities=20% Similarity=0.288 Sum_probs=72.8
Q ss_pred ccceeEeeeeeecCCcCCCCCCeeEEEEeCCCCc----cCcccCceecC-CCCCeeccE-EEEE-ecCCC-cEEEEEEEE
Q psy8342 114 TEQIRLRIIAGHSLAKKDIFGARIDLNTVNGDQT----IDSALTKTRKK-TLNPVWNEE-FIFR-VKPSE-HKLVFQVFD 185 (225)
Q Consensus 114 ~~~l~v~vi~a~~L~~~d~~g~~~~~~~~~~~~~----~~~~kT~v~~~-~~~P~Wne~-f~f~-v~~~~-~~L~v~V~d 185 (225)
...|.|+|++|++|+... .++|+.+.....+ ..+++|+++++ ++||+|||+ |.|. +..++ ..|.|.|||
T Consensus 649 ~~~L~V~Visaq~L~~~~---~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D 725 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDKQ---ISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSE 725 (816)
T ss_dssp CEEEEEEEEEEECCCSSC---CCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEcccCCCCC---CCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEe
Confidence 578999999999998541 2666655432211 13678999885 699999998 9998 76554 678999999
Q ss_pred ccCCCCCceeEEEEEECcccCCCCCCccccCeeEEcc
Q psy8342 186 MNRLTRDDFLGMVELSLLNLPRESDGCVIHNKKYILR 222 (225)
Q Consensus 186 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~w~~L~ 222 (225)
++ ++|||++.|||+.|..| ..+++|.
T Consensus 726 ~d----ddfiG~~~ipL~~L~~G-------yR~vpL~ 751 (816)
T 3qr0_A 726 EN----GKFIGHRVMPLDGIKPG-------YRHVPLR 751 (816)
T ss_dssp TT----SCEEEEEEEESTTCCCE-------EEEEEEE
T ss_pred cC----CCeeeEEEEEHHHcCCc-------ceEEEEe
Confidence 85 78999999999999987 4556664
No 53
>2dwv_A Salvador homolog 1 protein; WW domain, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.15 E-value=2.6e-11 Score=72.82 Aligned_cols=35 Identities=37% Similarity=0.765 Sum_probs=33.0
Q ss_pred CCCCCCceeeeeCCCCcEEEeeecceeeecccccc
Q psy8342 66 GALPPGWEERTDANGRTYYVNHIARCTQWERPTVH 100 (225)
Q Consensus 66 ~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~ 100 (225)
.+||+|||++.|..|++|||||.++.++|++|+..
T Consensus 12 ~~LP~GWe~~~d~~g~~YYvnh~t~~T~We~P~~~ 46 (49)
T 2dwv_A 12 EGLPPGWERVESSEFGTYYVDHTNKRAQYRHPSGP 46 (49)
T ss_dssp SCCCTTEEEEEETTTEEEEEETTTTEEESSCCCCC
T ss_pred CCCCcCcEEEECCCCCEEEEECCCCCEeccCcCCC
Confidence 78999999999999999999999999999999754
No 54
>2djy_A SMAD ubiquitination regulatory factor 2; beta sheet, polyproline type II helix, PPII, ligase/signaling protein complex; NMR {Homo sapiens} PDB: 2lb1_A
Probab=99.14 E-value=3e-11 Score=70.26 Aligned_cols=36 Identities=50% Similarity=1.021 Sum_probs=33.4
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeecccccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPTVH 100 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~ 100 (225)
..+||+||+.+.+..|++||+||.++.++|++|+..
T Consensus 5 ~~~LP~GWe~~~~~~G~~Yy~nh~t~~ttW~~Pr~~ 40 (42)
T 2djy_A 5 SGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLS 40 (42)
T ss_dssp CSCCCSSEEEEECSSSCEEEEETTTTEEESSCTTTS
T ss_pred cCCCCcCcEEEECCCCCEEEEECCCCCEeCCCCCCC
Confidence 468999999999999999999999999999999864
No 55
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens}
Probab=99.13 E-value=2.4e-11 Score=69.25 Aligned_cols=34 Identities=41% Similarity=1.003 Sum_probs=32.2
Q ss_pred CCCCCCceeeeeCCCCcEEEeeecceeeeccccc
Q psy8342 66 GALPPGWEERTDANGRTYYVNHIARCTQWERPTV 99 (225)
Q Consensus 66 ~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~ 99 (225)
.+||+||+.+.+.+|++||+||.++.++|.+|++
T Consensus 5 ~~LP~gWe~~~~~~G~~Yy~nh~t~~ttW~~Prl 38 (38)
T 2law_A 5 GPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRL 38 (38)
T ss_dssp CCCSSSCCEEEETTTEEEEEETTTTEEESSCTTC
T ss_pred CCCCCCcEEEECCCCCEEEEECCCCCEeCCCCCC
Confidence 6799999999999999999999999999999974
No 56
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.13 E-value=3.2e-11 Score=69.47 Aligned_cols=35 Identities=37% Similarity=0.762 Sum_probs=32.8
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeeccccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPTV 99 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~ 99 (225)
..+||+||+.+.+.+|++||+||.++.++|++|+.
T Consensus 5 ~~~LP~gWe~~~~~~G~~Yy~nh~t~~ttw~~Pr~ 39 (40)
T 2ysf_A 5 SSGLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRT 39 (40)
T ss_dssp CCCCCSSEEEEECTTCCEEEEETTTCCEESSCTTT
T ss_pred cCCCCcCcEEEEcCCCCEEEEECCCCcEecCCCCC
Confidence 36799999999999999999999999999999975
No 57
>2ez5_W Dnedd4, E3 ubiquitin-protein ligase NEDD4; WW domain, PY motif, binding affinity, signalling protein,ligase; NMR {Drosophila melanogaster}
Probab=99.11 E-value=6.7e-11 Score=70.18 Aligned_cols=37 Identities=35% Similarity=0.840 Sum_probs=34.1
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeeccccccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPTVHH 101 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~~ 101 (225)
..+||+||+.+.+.+|++||+||.++.++|++|+...
T Consensus 8 ~~~LP~gWe~~~~~~Gr~Yyinh~t~~TtW~~Pr~~~ 44 (46)
T 2ez5_W 8 EEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRNGR 44 (46)
T ss_dssp SCCCCTTEEEEECTTSSEEEEETTTTEEESBCTTTCC
T ss_pred CCCCCcCcEEEEcCCCCEEEEECCCCCEeccCCCCCC
Confidence 4689999999999999999999999999999998653
No 58
>1wr7_A NEDD4-2; all-beta, ligase; NMR {Mus musculus}
Probab=99.10 E-value=7e-11 Score=68.47 Aligned_cols=35 Identities=46% Similarity=1.069 Sum_probs=32.9
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeeccccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPTV 99 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~ 99 (225)
..+||+||+++.+.+|++||+||.++.++|++|+.
T Consensus 6 ~~~LP~gWe~~~~~~G~~Yy~n~~t~~t~We~Pr~ 40 (41)
T 1wr7_A 6 QSFLPPGWEMRIAPNGRPFFIDHNTKTTTWEDPRL 40 (41)
T ss_dssp CCSSCTTEEEEECTTSCEEEEETTTTEEESSCGGG
T ss_pred cCCCCCCcEEEEcCCCCEEEEECCCCCeecCCCCC
Confidence 47899999999999999999999999999999975
No 59
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus}
Probab=99.10 E-value=5e-11 Score=67.16 Aligned_cols=34 Identities=65% Similarity=1.270 Sum_probs=31.9
Q ss_pred CCCCCCceeeeeCCCCcEEEeeecceeeeccccc
Q psy8342 66 GALPPGWEERTDANGRTYYVNHIARCTQWERPTV 99 (225)
Q Consensus 66 ~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~ 99 (225)
.+||+||+++.|..|++||+||.++.++|++|++
T Consensus 3 ~~LP~GWe~~~d~~G~~Yy~n~~t~~t~We~P~l 36 (36)
T 1wr3_A 3 PPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSL 36 (36)
T ss_dssp SCSCTTEEEEECSSSCEEEEETTTCCEESSCSCC
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCEeeeCcCC
Confidence 5799999999999999999999999999999963
No 60
>2zaj_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; BAI1-associated protein 1 (BAP-1); NMR {Homo sapiens}
Probab=99.09 E-value=5.2e-11 Score=71.41 Aligned_cols=36 Identities=44% Similarity=0.743 Sum_probs=33.6
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeecccccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPTVH 100 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~ 100 (225)
..+||+||+++.+..|++|||||.++.++|++|+..
T Consensus 11 ~~~LP~GWe~~~d~~Gr~YYvnh~t~~T~We~P~~~ 46 (49)
T 2zaj_A 11 ELELPAGWEKIEDPVYGIYYVDHINRKTQYENPSGP 46 (49)
T ss_dssp SSCCCTTEEEEEETTTEEEEEETTTTEEESSCCCSS
T ss_pred CCCCCcCceEEEcCCCCEEEEeCCCCCEecCCCCCC
Confidence 478999999999999999999999999999999864
No 61
>2kyk_A E3 ubiquitin-protein ligase itchy homolog; LMP2A, PY motif, WW domain; NMR {Homo sapiens}
Probab=99.09 E-value=6e-11 Score=68.04 Aligned_cols=35 Identities=60% Similarity=1.289 Sum_probs=32.7
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeeccccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPTV 99 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~ 99 (225)
..+||+||+++.|..|++||+||.++.++|.+|+.
T Consensus 4 ~~~LP~gWe~~~d~~G~~YY~n~~t~~t~We~P~~ 38 (39)
T 2kyk_A 4 MGPLPPGWERRVDNMGRIYYVDHFTRTTTWQRPTL 38 (39)
T ss_dssp SCCCCSSCEEEECTTSCEEEECSSSCCEECCCCCC
T ss_pred cCCCCCCcEEEEcCCCCEEEEECCCCCEeccCCCC
Confidence 36899999999999999999999999999999974
No 62
>1wr4_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} PDB: 2lb2_A*
Probab=99.06 E-value=1e-10 Score=65.95 Aligned_cols=34 Identities=65% Similarity=1.226 Sum_probs=31.8
Q ss_pred CCCCCCceeeeeCCCCcEEEeeecceeeeccccc
Q psy8342 66 GALPPGWEERTDANGRTYYVNHIARCTQWERPTV 99 (225)
Q Consensus 66 ~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~ 99 (225)
.+||+||+++.|..|++||+||.++.++|++|++
T Consensus 3 ~~LP~gWe~~~d~~g~~Yy~n~~t~~t~W~~P~~ 36 (36)
T 1wr4_A 3 PGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIM 36 (36)
T ss_dssp TTCCTTEEEEECSSSCEEEEETTTTEEESSCCCC
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCEeCcCCCC
Confidence 5799999999999999999999999999999963
No 63
>2jmf_A E3 ubiquitin-protein ligase suppressor of deltex; WW domain, solution, complex, ligase/signaling protein complex; NMR {Drosophila melanogaster} SCOP: b.72.1.1 PDB: 2op7_A
Probab=99.05 E-value=1.1e-10 Score=71.14 Aligned_cols=37 Identities=43% Similarity=0.879 Sum_probs=34.1
Q ss_pred cCCCCCCCceeeeeCCCCcEEEeeecceeeecccccc
Q psy8342 64 QQGALPPGWEERTDANGRTYYVNHIARCTQWERPTVH 100 (225)
Q Consensus 64 ~~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~ 100 (225)
...+||+|||.+.+..|+.||+||+++.++|.+|+..
T Consensus 15 ~~~~LP~GWe~~~~~~Gr~Yyinh~tk~TtW~dPr~~ 51 (53)
T 2jmf_A 15 NEGPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPRPG 51 (53)
T ss_dssp SCSCCCTTEEEEECTTSCEEEEETTTCCEESSCCCSS
T ss_pred cCCCCCcCcEEEEcCCCCEEEEeCCCCcEecCCCCCC
Confidence 4578999999999999999999999999999999864
No 64
>2l4j_A YES-associated protein 2 (YAP2); WW domain, medaka, transcription; NMR {Oryzias latipes}
Probab=99.05 E-value=1.2e-10 Score=68.99 Aligned_cols=36 Identities=39% Similarity=0.947 Sum_probs=33.5
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeecccccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPTVH 100 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~ 100 (225)
..+||+||+.+.+..|++||+||.++.++|++|+..
T Consensus 9 ~~~LP~gWe~~~~~~G~~Yyinh~t~~TtWe~Pr~~ 44 (46)
T 2l4j_A 9 SGPLPEGWEQAITPEGEIYYINHKNKTTSWLDPRLE 44 (46)
T ss_dssp TSCCCTTCEEEECTTSCEEEEETTTTEEECSCCSSC
T ss_pred CCCCCcCceeEECCCCCEEEEECCCCCEeCCCCCcC
Confidence 468999999999999999999999999999999864
No 65
>1i5h_W Rnedd4, ubiquitin ligase NEDD4; NEDD4, WW domains, ENAC, PY motif, liddle syndrome, proline-rich, ligase; NMR {Rattus norvegicus} SCOP: b.72.1.1 PDB: 1yiu_A 2jo9_A 2joc_A*
Probab=99.05 E-value=1.3e-10 Score=70.16 Aligned_cols=37 Identities=51% Similarity=1.149 Sum_probs=34.1
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeeccccccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPTVHH 101 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~~ 101 (225)
..+||+||+.+.+..|++||+||.++.++|++|+...
T Consensus 9 ~~~LP~gWe~~~~~~Gr~Yy~nh~t~~T~We~Pr~~~ 45 (50)
T 1i5h_W 9 LGPLPPGWEERTHTDGRVFFINHNIKKTQWEDPRMQN 45 (50)
T ss_dssp CSSCSTTEEEEECTTSCEEEEETTTTEEESSCTTTSC
T ss_pred CCCCCcCcEEEEcCCCCEEEEECCCCCEEeeCCCCCc
Confidence 4689999999999999999999999999999998654
No 66
>2ysb_A Salvador homolog 1 protein; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: k.22.1.1
Probab=99.04 E-value=1.7e-10 Score=69.23 Aligned_cols=38 Identities=34% Similarity=0.775 Sum_probs=34.3
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeecccccccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPTVHHT 102 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~~~ 102 (225)
..+||+||+.+.+..|++||+||+++.++|.+|+....
T Consensus 9 ~~~LP~gWe~~~~~~Gr~Yy~nh~t~~T~W~~P~~~~p 46 (49)
T 2ysb_A 9 DLPLPPGWSVDWTMRGRKYYIDHNTNTTHWSHPLESGP 46 (49)
T ss_dssp CCCCCTTEEEEECSSSCEEEEETTTTEEESSCTTTSCC
T ss_pred CCCCCCCceEEECCCCCEEEEEcCCCCEEecCCCCCCC
Confidence 36799999999999999999999999999999986543
No 67
>1wmv_A WWOX, WW domain containing oxidoreductase; all-beta, apoptosis; NMR {Homo sapiens}
Probab=99.04 E-value=2.1e-10 Score=70.30 Aligned_cols=40 Identities=40% Similarity=0.838 Sum_probs=36.3
Q ss_pred cCCCCCCCceeeeeCCCCcEEEeeecceeeeccccccccC
Q psy8342 64 QQGALPPGWEERTDANGRTYYVNHIARCTQWERPTVHHTM 103 (225)
Q Consensus 64 ~~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~~~~ 103 (225)
...+||+|||.+.+..|++|||||+++.++|++|+....+
T Consensus 8 ~~~~LP~GWe~~~~~~G~~Yyinh~tk~TtwedPr~~~~~ 47 (54)
T 1wmv_A 8 VAGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRLAFTV 47 (54)
T ss_dssp CSSCSCTTEEEEECTTSCEEEEESSSCCEESSCTTSSCCC
T ss_pred cCCCCCcCcEEEECCCCCEEEEeCCCCCEeecCCCCcccc
Confidence 3568999999999999999999999999999999987655
No 68
>2dmv_A Itchy homolog E3 ubiquitin protein ligase; WW domain, three stranded antiparallel beta sheet, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=1.4e-10 Score=67.88 Aligned_cols=36 Identities=50% Similarity=1.181 Sum_probs=33.2
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeecccccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPTVH 100 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~ 100 (225)
..+||+||+++.|..|++||+||.++.++|++|+..
T Consensus 5 ~~~LP~GWe~~~d~~Gr~YY~n~~t~~T~We~P~~~ 40 (43)
T 2dmv_A 5 SSGLPPGWEQRVDQHGRVYYVDHVEKRTTWDRPSGP 40 (43)
T ss_dssp CCSCCTTEEEEECTTSCEEEEETTTCCEESSCSSSC
T ss_pred CCCCCCCceEEECCCCCEEEEECCCCCEecCCcCCC
Confidence 367999999999999999999999999999999754
No 69
>2yse_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI-1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.02 E-value=1.3e-10 Score=72.52 Aligned_cols=38 Identities=42% Similarity=0.743 Sum_probs=34.7
Q ss_pred cCCCCCCCceeeeeCCCCcEEEeeecceeeeccccccc
Q psy8342 64 QQGALPPGWEERTDANGRTYYVNHIARCTQWERPTVHH 101 (225)
Q Consensus 64 ~~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~~ 101 (225)
...+||+|||.+.|..|++|||||.++.++|++|+...
T Consensus 10 ~~~~LP~GWE~~~d~~Gr~YYvnh~tk~T~We~P~~~~ 47 (60)
T 2yse_A 10 SELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEA 47 (60)
T ss_dssp CCSSCCSSEEEEECSSSCEEEEETTTTEEESSCHHHHH
T ss_pred CCCCCCCCcEEEECCCCCEEEEeCCCCCeeccCCCchh
Confidence 35789999999999999999999999999999998653
No 70
>2kpz_A E3 ubiquitin-protein ligase NEDD4; WW domain, HTLV1, NEDD4, human modular domain, complex, HOST interaction, ligase; NMR {Homo sapiens} PDB: 2kq0_A 2laj_A*
Probab=99.01 E-value=1.7e-10 Score=69.47 Aligned_cols=38 Identities=42% Similarity=0.972 Sum_probs=32.6
Q ss_pred cCCCCCCCceeeeeCCCCcEEEeeecceeeeccccccc
Q psy8342 64 QQGALPPGWEERTDANGRTYYVNHIARCTQWERPTVHH 101 (225)
Q Consensus 64 ~~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~~ 101 (225)
...+||+||+.+.+.+|++||+||.++.++|++|+...
T Consensus 9 ~~~~LP~gWe~~~~~~G~~Yy~nh~T~~ttWe~Pr~~~ 46 (49)
T 2kpz_A 9 EQGFLPKGWEVRHAPNGRPFFIDHNTKTTTWEDPRLKI 46 (49)
T ss_dssp ---CCCTTEEEEECTTSCEEEEETTTTEEESSCTTCC-
T ss_pred cCCCCCCCcEEEECCCCCEEEEECCCCCEecCCCCCCC
Confidence 34789999999999999999999999999999998654
No 71
>2ysd_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.98 E-value=3.6e-10 Score=69.94 Aligned_cols=38 Identities=32% Similarity=0.752 Sum_probs=34.8
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeecccccccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPTVHHT 102 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~~~ 102 (225)
..+||+||+.+.+..|++|||||.++.++|.+|+....
T Consensus 12 ~~~LP~GWe~~~~~~Gr~Yyinh~tk~TtWe~Pr~~~~ 49 (57)
T 2ysd_A 12 LGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNK 49 (57)
T ss_dssp CCSCCSSEEEEECSSCCEEEEETTTTEEESSCTTTCSS
T ss_pred CCCCCcCcEEEECCCCCEEEEECCCCcEecCCCCCccc
Confidence 47899999999999999999999999999999987644
No 72
>2ho2_A Fe65 protein, amyloid beta A4 protein-binding family B member 1; WW domain, beta sheet, Fe65, protein binding; 1.33A {Homo sapiens} SCOP: b.72.1.1 PDB: 2idh_A* 2oei_A
Probab=98.98 E-value=3.2e-10 Score=64.15 Aligned_cols=34 Identities=41% Similarity=0.773 Sum_probs=30.8
Q ss_pred CCCCCCceeeeeCCCCcEEEeeecceeeecccccc
Q psy8342 66 GALPPGWEERTDANGRTYYVNHIARCTQWERPTVH 100 (225)
Q Consensus 66 ~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~ 100 (225)
.+||+||+++.|..| +||+||.++.+||++|+..
T Consensus 2 ~~LP~GWe~~~d~~g-~YY~n~~t~~tqWe~P~~~ 35 (38)
T 2ho2_A 2 SDLPAGWMRVQDTSG-TYYWHIPTGTTQWEPPGRA 35 (38)
T ss_dssp CCSCTTEEEEECSSC-EEEEETTTTEEESSCCCC-
T ss_pred CcCCCCceEEEeCCC-CEEEecCCCCEeccCCCCC
Confidence 469999999999999 9999999999999999753
No 73
>1e0m_A Wwprototype; SH3 prototype, protein design, de novo protein; NMR {} SCOP: k.22.1.1
Probab=98.93 E-value=6.9e-10 Score=62.83 Aligned_cols=34 Identities=44% Similarity=1.028 Sum_probs=31.9
Q ss_pred CCCCCCceeeeeCCCCcEEEeeecceeeeccccc
Q psy8342 66 GALPPGWEERTDANGRTYYVNHIARCTQWERPTV 99 (225)
Q Consensus 66 ~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~ 99 (225)
.+||+||+++.+..|+.||+||.++.++|++|+.
T Consensus 2 ~~LP~gW~~~~~~~G~~Yy~n~~t~~t~W~~P~~ 35 (37)
T 1e0m_A 2 MGLPPGWDEYKTHNGKTYYYNHNTKTSTWTDPRM 35 (37)
T ss_dssp CCSCTTEEEEECSSCCEEEEETTTTEEESSCTTT
T ss_pred CCCCCCcEEEECCCCCEEEEECCCCCeeeeCcCC
Confidence 4699999999999999999999999999999975
No 74
>2ysh_A GAS-7, growth-arrest-specific protein 7; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.90 E-value=9e-10 Score=63.44 Aligned_cols=35 Identities=46% Similarity=1.003 Sum_probs=32.3
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeeccccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPTV 99 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~ 99 (225)
..+||+||+++.|..|++||+||.++.++|++|..
T Consensus 5 ~~~LP~gW~~~~d~~Gr~YY~n~~T~~t~We~P~~ 39 (40)
T 2ysh_A 5 SSGLPPGWQSYLSPQGRRYYVNTTTNETTWERPSS 39 (40)
T ss_dssp CSSCCTTCEEEECTTSCEEEECSSSCCEESSSCCC
T ss_pred CCCCCCCceEEECCCCCEEEEECCCCCEeCCCCCC
Confidence 36799999999999999999999999999999863
No 75
>2e45_A Fe65 protein, amyloid beta A4 precursor protein-binding family B member 1; triple-stranded beta-sheet; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.89 E-value=8.6e-10 Score=66.31 Aligned_cols=35 Identities=40% Similarity=0.759 Sum_probs=32.2
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeecccccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPTVH 100 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~ 100 (225)
...||+||+++.|..| +||++|.++.+||++|...
T Consensus 17 ~~~LPpGW~~~~D~sG-tYY~h~~T~tTQWerP~~~ 51 (55)
T 2e45_A 17 DSDLPAGWMRVQDTSG-TYYWHIPTGTTQWEPPGRA 51 (55)
T ss_dssp CSCCCTTEEEEEETTE-EEEEETTTCCEESSCCCCC
T ss_pred CCCCCCCCeEeecCCC-CEEEEcCCCCCccCCCCCC
Confidence 4679999999999999 9999999999999999653
No 76
>2ysc_A Amyloid beta A4 precursor protein-binding family B member 3; Fe65-like protein 2, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.88 E-value=1.1e-09 Score=62.32 Aligned_cols=33 Identities=52% Similarity=1.061 Sum_probs=30.2
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeecccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPT 98 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~ 98 (225)
..+||+||+++.|..|+ ||+||.++.++|++|+
T Consensus 6 ~~~LP~GWe~~~~~~G~-YY~n~~t~~tqWe~P~ 38 (39)
T 2ysc_A 6 SGGLPPGWRKIHDAAGT-YYWHVPSGSTQWQRPT 38 (39)
T ss_dssp CCCCCTTEEEEEETTEE-EEEESSSCCEESSCCC
T ss_pred CCCCCCCcEEEEcCCCC-EEEEcCCCCEeccCCC
Confidence 36899999999998895 9999999999999985
No 77
>1ymz_A CC45; artificial protein, computational design, unknown function; NMR {Synthetic} SCOP: k.22.1.1
Probab=98.85 E-value=1.6e-09 Score=63.36 Aligned_cols=35 Identities=54% Similarity=1.088 Sum_probs=32.2
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeeccccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPTV 99 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~ 99 (225)
..+||+||+++.|..|++||+||.++.++|.+|+.
T Consensus 6 ~~~LP~gW~~~~~~~Gr~YY~n~~T~~t~We~P~~ 40 (43)
T 1ymz_A 6 SMPLPPGWERRTDVEGKVYYFNVRTLTTTWERPTI 40 (43)
T ss_dssp -CCCCSSEEEEECTTSCEEEEETTTTEEESSCCCS
T ss_pred CCCCCCCCEEEECCCCCEEEEECCCCCCcccCCcc
Confidence 46799999999999999999999999999999974
No 78
>1jmq_A YAP65, 65 kDa YES-associated protein; polyproline ligand, YAP65 mutant, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1k9q_A* 1k9r_A 1k5r_A* 2lax_A* 2lay_A*
Probab=98.76 E-value=4e-09 Score=62.62 Aligned_cols=37 Identities=35% Similarity=0.782 Sum_probs=33.9
Q ss_pred CCCCCCceeeeeCCCCcEEEeeecceeeecccccccc
Q psy8342 66 GALPPGWEERTDANGRTYYVNHIARCTQWERPTVHHT 102 (225)
Q Consensus 66 ~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~~~ 102 (225)
.+||+||+.+.+..|+.||+||+++.++|.+|+....
T Consensus 7 ~~LP~GWe~~~~~~gr~y~~n~~t~~t~W~dPr~~~~ 43 (46)
T 1jmq_A 7 VPLPAGWEMAKTSSGQRYFKNHIDQTTTWQDPRKAML 43 (46)
T ss_dssp CCCCTTBCCBCCSSCCCBEEETTTTEEESSCTTTSSS
T ss_pred CCCCcCcEEEEcCCCceEEEEecCCceeecCCCchhh
Confidence 5799999999999999999999999999999987643
No 79
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.75 E-value=2.3e-08 Score=72.18 Aligned_cols=105 Identities=13% Similarity=0.167 Sum_probs=72.8
Q ss_pred CccceeEeeeeeecCCcCCCCC--CeeEEEEeCCCCcc-CcccC-ceecCCCCCeeccEEEEEecCCCcEEEEEEEEccC
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFG--ARIDLNTVNGDQTI-DSALT-KTRKKTLNPVWNEEFIFRVKPSEHKLVFQVFDMNR 188 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g--~~~~~~~~~~~~~~-~~~kT-~v~~~~~~P~Wne~f~f~v~~~~~~L~v~V~d~d~ 188 (225)
...-|+|.+.+..-.+.+...+ .++|+.+....... ...+| ..+++|..|+|||+|.-.|.+. +.|.|.|++...
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~G-r~l~i~Vfh~a~ 86 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINKG-RVMQIIVKGKNV 86 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCSS-CEEEEEEECSSC
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEECC-eEEEEEEEcCCC
Confidence 4566788887665443332111 27777665543211 13566 6677899999999999888865 589999996443
Q ss_pred CCCCceeEEEEEECcccCCC---CCCccccCeeEEcccC
Q psy8342 189 LTRDDFLGMVELSLLNLPRE---SDGCVIHNKKYILRPR 224 (225)
Q Consensus 189 ~~~d~~lG~~~i~l~~l~~~---~~~~~~~~~w~~L~pr 224 (225)
+|++.++|++.+|... .+ ...+.|+.|+|-
T Consensus 87 ----~fVAn~tV~~edL~~~ck~~~--g~~e~WvdLeP~ 119 (138)
T 2enj_A 87 ----DLISETTVELYSLAERCRKNN--GKTEIWLELKPQ 119 (138)
T ss_dssp ----SCCEEEEEESHHHHHHHHHTT--TCEEEEEECBSS
T ss_pred ----CeeeEEEEEHHHHHhhhccCC--CceEEEEecccC
Confidence 8999999999999843 11 223899999994
No 80
>3l4h_A E3 ubiquitin-protein ligase HECW1; E3 ligase, WW domain, UBL-conjugation pathway, structural GE structural genomics consortium, SGC, coiled coil; HET: MSE; 1.80A {Homo sapiens}
Probab=98.74 E-value=5.3e-09 Score=72.70 Aligned_cols=37 Identities=35% Similarity=0.780 Sum_probs=34.0
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeeccccccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPTVHH 101 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~~ 101 (225)
..+||+|||.+.+..|+.|||||+++.++|.+|+...
T Consensus 70 ~~pLP~GWE~r~d~~Gr~YfIdH~tktTtW~dPRl~~ 106 (109)
T 3l4h_A 70 RLELPRGWEIKTDQQGKSFFVDHNSRATTFIDPRIPL 106 (109)
T ss_dssp TSCCCTTEEEEECTTCCEEEEETTTTEEESSCSCCSC
T ss_pred CCCCCCCCeEEECCCCCEEEEeCCCCCEeeCCCCccc
Confidence 4689999999999999999999999999999998653
No 81
>2jv4_A Peptidyl-prolyl CIS/trans isomerase; ppiase domain, WW domain group IV, rotamase; NMR {Emericella nidulans}
Probab=98.73 E-value=8.2e-09 Score=63.12 Aligned_cols=35 Identities=37% Similarity=0.784 Sum_probs=31.9
Q ss_pred CCCCCCceeeeeC-CCCcEEEeeecceeeecccccc
Q psy8342 66 GALPPGWEERTDA-NGRTYYVNHIARCTQWERPTVH 100 (225)
Q Consensus 66 ~~LP~gwe~~~d~-~gr~~yv~~~~~~~~w~~P~~~ 100 (225)
.+||+||+.+.|. .|+.||+|+.++.++|++|...
T Consensus 6 ~~LP~GW~~~~~~~~Gr~YY~N~~T~~sqWe~P~~~ 41 (54)
T 2jv4_A 6 TGLPAGWEVRHSNSKNLPYYFNPATRESRWEPPADT 41 (54)
T ss_dssp CCCCSSCCEEECSSSSCEEEEETTTTEEESSCCTTS
T ss_pred CCCCCCcEEEEECCCCCEEEEECCCCcEEecCCCCc
Confidence 6799999999985 8999999999999999999753
No 82
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.72 E-value=2.9e-08 Score=70.74 Aligned_cols=106 Identities=11% Similarity=0.055 Sum_probs=69.6
Q ss_pred ccceeEeeeeeecCCcCCCCCC-eeEEEEeCCCCccC-cccC-ceecCCCCCeeccEEEEEecCCCcEEEEEEEEccCCC
Q psy8342 114 TEQIRLRIIAGHSLAKKDIFGA-RIDLNTVNGDQTID-SALT-KTRKKTLNPVWNEEFIFRVKPSEHKLVFQVFDMNRLT 190 (225)
Q Consensus 114 ~~~l~v~vi~a~~L~~~d~~g~-~~~~~~~~~~~~~~-~~kT-~v~~~~~~P~Wne~f~f~v~~~~~~L~v~V~d~d~~~ 190 (225)
..-|+|.+.++.--..+...-. ++|+.+........ ..+| ..+++|.+|+|||+|.-.+.+. +.|.|.|++...
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~G-r~l~i~Vfh~a~-- 81 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYEG-RVIQIVLMRAAE-- 81 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCTT-CEEEEEEEEETT--
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeCC-EEEEEEEEcCCC--
Confidence 3456666655543222211111 67776655432211 2355 5677899999999999998875 589999997543
Q ss_pred CCceeEEEEEECcccCCCCC-CccccCeeEEcccC
Q psy8342 191 RDDFLGMVELSLLNLPRESD-GCVIHNKKYILRPR 224 (225)
Q Consensus 191 ~d~~lG~~~i~l~~l~~~~~-~~~~~~~w~~L~pr 224 (225)
+|++.++|++.+|..... .+...+.|+.|+|-
T Consensus 82 --~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP~ 114 (126)
T 1yrk_A 82 --EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQPQ 114 (126)
T ss_dssp --EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBSS
T ss_pred --CeeeEEEEEHHHHHhhhccCCCceEEEEecccC
Confidence 899999999999984310 01234899999994
No 83
>1o6w_A PRP40, PRE-mRNA processing protein PRP40; WW domain PAIR, nuclear protein, mRNA splicing, ribonucleoprotein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1 b.72.1.1
Probab=98.67 E-value=1.5e-09 Score=71.51 Aligned_cols=69 Identities=25% Similarity=0.427 Sum_probs=53.3
Q ss_pred cCcccCCCCCeEEEeCCCCc--eeecCCcccccCccccCCCCCCCceeeeeCCCCcEEEeeecceeeecccccc
Q psy8342 29 RHRESADPDSWIIVDASTES--IVETPAQPLFIGGVEQQGALPPGWEERTDANGRTYYVNHIARCTQWERPTVH 100 (225)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~ 100 (225)
.|++..++.|..|+-++... +|..|.... .......||.||++..+..|++||+||.++.++|.+|...
T Consensus 3 ~W~~~~~~~Gr~YY~n~~T~~s~W~~P~~~~---~~~~~~~lp~gW~~~~~~~Gr~Yy~n~~t~~t~W~~P~~~ 73 (75)
T 1o6w_A 3 IWKEAKDASGRIYYYNTLTKKSTWEKPKELI---SQEELLLRENGWKAAKTADGKVYYYNPTTRETSWTIPAFE 73 (75)
T ss_dssp CEEEEECTTCCEEEEETTTTEEESSCCHHHH---HHHHHHHHHHTCEEEECTTCCEEEEETTTTEEESSCCCCC
T ss_pred CCeEEECCCCCeEEEECCCCCEEeecchhhc---ccccccCCCCeEEEEECCCCCEEEEECCCCCEECCCCCCC
Confidence 38888888899988776665 777775210 0111245899999999999999999999999999999753
No 84
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=98.57 E-value=1.9e-08 Score=68.73 Aligned_cols=75 Identities=20% Similarity=0.322 Sum_probs=56.9
Q ss_pred ccccccCcccCCCCCeEEEeCCCCc--eeecCCcccccCccccCCCCCCCceeeeeCCCCcEEEeeecceeeeccccccc
Q psy8342 24 NLEVSRHRESADPDSWIIVDASTES--IVETPAQPLFIGGVEQQGALPPGWEERTDANGRTYYVNHIARCTQWERPTVHH 101 (225)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~~ 101 (225)
.++.+ |++..++.|..||-++.+. +|+.|... ........||.+|+++.+.+||+||+|+.++.++|.+|....
T Consensus 11 ~lp~~-W~e~~~~~Gr~YYyN~~T~~s~We~P~~~---~~~~e~~~~~~~W~~~~~~~Gr~Yy~N~~T~~s~We~P~~~~ 86 (92)
T 2l5f_A 11 GAKSM-WTEHKSPDGRTYYYNTETKQSTWEKPDDL---KTPAEQLLSKCPWKEYKSDSGKTYYYNSQTKESRWAKPKELE 86 (92)
T ss_dssp BTTTT-EEEEECTTSCEEEEETTTTEEESSCSGGG---TCHHHHHHHSCSEEEEECTTCCEEEEETTTTEEESCCCHHHH
T ss_pred CCCCC-cEEEEcCCCCEEEEECCCCceecccCccc---cccccccccccceEEEECCCCCEEEEECCCCCeeccCchhHh
Confidence 35555 9999988899998776665 78777631 011112358899999999999999999999999999998644
Q ss_pred c
Q psy8342 102 T 102 (225)
Q Consensus 102 ~ 102 (225)
.
T Consensus 87 ~ 87 (92)
T 2l5f_A 87 D 87 (92)
T ss_dssp T
T ss_pred h
Confidence 3
No 85
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=98.54 E-value=3.9e-08 Score=66.63 Aligned_cols=37 Identities=46% Similarity=1.010 Sum_probs=33.8
Q ss_pred cCCCCCCCceeeeeCCCCcEEEeeecceeeecccccc
Q psy8342 64 QQGALPPGWEERTDANGRTYYVNHIARCTQWERPTVH 100 (225)
Q Consensus 64 ~~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~ 100 (225)
...+||+||+++.+..|++||+||.++.++|.+|+..
T Consensus 9 ~~~~LP~gWe~~~~~~Gr~Yy~n~~t~~t~W~~P~~~ 45 (88)
T 1tk7_A 9 ALGPLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQ 45 (88)
T ss_dssp TTSSSSSSCCEEEETTTEEEEEETTTTEEEEESCCCT
T ss_pred ccCCCCCCcEEEECCCCCEEEEECCCCCeEeeccccc
Confidence 3468999999999999999999999999999999754
No 86
>2kxq_A E3 ubiquitin-protein ligase smurf2; WW, smurf2, TGF-beta, modular binding, protein BIN; NMR {Homo sapiens} PDB: 2lb0_A* 2laz_A*
Probab=98.48 E-value=6.9e-08 Score=65.69 Aligned_cols=36 Identities=31% Similarity=0.737 Sum_probs=33.3
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeecccccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPTVH 100 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~ 100 (225)
..+||+||+.+.+.+||+||+||.++.++|.+|+..
T Consensus 7 ~~~LP~gWe~~~~~~Gr~YY~n~~t~~t~W~~P~~~ 42 (90)
T 2kxq_A 7 PPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVP 42 (90)
T ss_dssp CCSCCSSCEEEEETTTEEEEEETTTTEEESSCSSSC
T ss_pred CCCCCCCcEEEECCCCCEEEEECCCCeEeeeccccc
Confidence 367999999999999999999999999999999864
No 87
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=98.47 E-value=1.8e-07 Score=61.34 Aligned_cols=68 Identities=24% Similarity=0.361 Sum_probs=53.6
Q ss_pred ccCcccCCCCCeEEEeCCCCc--eeecCCcccccCccccCCCCCCCceeeeeCCCCcEEEeeecceeeecccc
Q psy8342 28 SRHRESADPDSWIIVDASTES--IVETPAQPLFIGGVEQQGALPPGWEERTDANGRTYYVNHIARCTQWERPT 98 (225)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~ 98 (225)
+.|++..+++|..||-++.+. +|+.|... ........+|.+|++..+..|+.||+|+.++.++|.+|.
T Consensus 5 ~~W~e~~~~~G~~YYyN~~T~~s~We~P~~~---~~~~e~~~~~~~W~~~~~~~Gr~YyyN~~T~~s~We~P~ 74 (75)
T 2jxw_A 5 GRWVEGITSEGYHYYYDLISGASQWEKPEGF---QGDLKKTAVKTVWVEGLSEDGFTYYYNTETGESRWEKPD 74 (75)
T ss_dssp CCEEEEEETTTEEEEEETTTTEEECSCCSSC---SSCCSSSSCCCSEEEEEETTTEEEEEETTTTEEESSCCC
T ss_pred CCcEEEECCCCCEEEEECCCCCEeecCCCcc---cccccccCCCccEEEEECCCCCEEEEECcCCCEeccCcC
Confidence 458888888899988776554 78877631 112223578999999999999999999999999999985
No 88
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=98.30 E-value=4.8e-07 Score=68.54 Aligned_cols=37 Identities=49% Similarity=1.099 Sum_probs=29.3
Q ss_pred CCCCCCceeeee-CCCCcEEEeeecceeeecccccccc
Q psy8342 66 GALPPGWEERTD-ANGRTYYVNHIARCTQWERPTVHHT 102 (225)
Q Consensus 66 ~~LP~gwe~~~d-~~gr~~yv~~~~~~~~w~~P~~~~~ 102 (225)
.+||+||+.+.+ ..|++||+||.++.++|++|+....
T Consensus 8 ~~LP~gWe~~~~~~~g~~yy~n~~t~~t~We~P~~~~~ 45 (166)
T 3tc5_A 8 EKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSS 45 (166)
T ss_dssp --CCTTEEEEECTTTCCEEEEETTTCCEESSCC-----
T ss_pred CCCCCCceEEEcCCCCCEEEEECCCCCEEecCCCCCcc
Confidence 679999999999 7999999999999999999986543
No 89
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=98.24 E-value=4e-07 Score=73.69 Aligned_cols=36 Identities=28% Similarity=0.661 Sum_probs=33.8
Q ss_pred CCCCCCceeeeeCCCCcEEEeeecceeeeccccccc
Q psy8342 66 GALPPGWEERTDANGRTYYVNHIARCTQWERPTVHH 101 (225)
Q Consensus 66 ~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~~ 101 (225)
.+||+|||.+.+.+|++|||||.+++|+|.+|+...
T Consensus 10 ~~l~~~we~~~~~~~~~y~~~h~~~tt~w~~p~~~~ 45 (261)
T 1eg3_A 10 TSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTE 45 (261)
T ss_dssp TTCCTTEEEEECTTSCEEEEETTTTEEESSCHHHHH
T ss_pred CCCCCCcceeECCCCCeEeecCCcccccCCCCchhh
Confidence 789999999999999999999999999999998544
No 90
>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}
Probab=98.18 E-value=6.4e-07 Score=77.76 Aligned_cols=39 Identities=36% Similarity=0.891 Sum_probs=35.4
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeeccccccccC
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPTVHHTM 103 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~~~~ 103 (225)
.++||+|||.+.+..|++|||||++++|+|.+|+.....
T Consensus 6 ~~~lP~gWe~~~~~~g~~y~i~h~~~~t~w~~Pr~~~~~ 44 (429)
T 3olm_A 6 LGPLPSGWEMRLTNTARVYFVDHNTKTTTWDDPRLPSSL 44 (429)
T ss_dssp CCCCCTTCCCCCSSCCCCCEEETTTTEEESSCTTSCCCC
T ss_pred CCCCCCCceeEECCCCCeEEEeCCCcceeccCCCCCccc
Confidence 478999999999999999999999999999999876533
No 91
>2jx8_A Hpcif1, phosphorylated CTD-interacting factor 1; protein fragment, WW domain, triple-standed beta-sheet, alpha-helix, nucleus, phosphorylation; NMR {Homo sapiens}
Probab=98.16 E-value=3.3e-07 Score=55.49 Aligned_cols=35 Identities=29% Similarity=0.653 Sum_probs=31.8
Q ss_pred CCCCCCceeeee-CCCCcEEEeeecceeeecccccc
Q psy8342 66 GALPPGWEERTD-ANGRTYYVNHIARCTQWERPTVH 100 (225)
Q Consensus 66 ~~LP~gwe~~~d-~~gr~~yv~~~~~~~~w~~P~~~ 100 (225)
..||+||+++.+ ..|+.||+|+.++.++|++|...
T Consensus 9 ~~LP~gW~~~~~~~~gr~YY~N~~T~~SqWe~P~~~ 44 (52)
T 2jx8_A 9 ELVHAGWEKCWSRRENRPYYFNRFTNQSLWEMPVLG 44 (52)
T ss_dssp HHHHHTCCEEEETTTTEEEEEETTTTEEESSCCCCT
T ss_pred CCCCcCcEEEEccccCCEEEEECCCCCEEeCCCCCC
Confidence 469999999998 68999999999999999999765
No 92
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=97.93 E-value=5.2e-06 Score=56.53 Aligned_cols=36 Identities=31% Similarity=0.667 Sum_probs=33.0
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeecccccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPTVH 100 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~ 100 (225)
..+||+||+++.+.+|+.||+|+.++.++|.+|...
T Consensus 9 ~~~lp~~W~e~~~~~Gr~YYyN~~T~~s~We~P~~~ 44 (92)
T 2l5f_A 9 ASGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDL 44 (92)
T ss_dssp TTBTTTTEEEEECTTSCEEEEETTTTEEESSCSGGG
T ss_pred CCCCCCCcEEEEcCCCCEEEEECCCCceecccCccc
Confidence 367999999999999999999999999999999753
No 93
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=97.89 E-value=1.1e-05 Score=45.91 Aligned_cols=34 Identities=26% Similarity=0.643 Sum_probs=31.2
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeecccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPT 98 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~ 98 (225)
..++|.+|.+..+.+|+.||.|..++.++|++|.
T Consensus 5 ~~~~~~~W~e~~~~~G~~YYyN~~T~eS~We~P~ 38 (40)
T 2ysi_A 5 SSGTEEIWVENKTPDGKVYYYNARTRESAWTKPD 38 (40)
T ss_dssp CCCCCCSEEEEECTTSCEEEEETTTCCEESSCCS
T ss_pred cCCCCCCCEEEECCCCCEEEEECCCCCEEeCCCC
Confidence 3568999999999999999999999999999985
No 94
>1ywi_A Formin-binding protein 3; WW domain, class II, proline-rich peptides, protein-protein interactions, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1ywj_A 1zr7_A 2dyf_A
Probab=97.69 E-value=2.2e-05 Score=44.91 Aligned_cols=34 Identities=35% Similarity=0.807 Sum_probs=27.2
Q ss_pred CCCCCCCceeeeeCCCCcEEEeeecceeeecccc
Q psy8342 65 QGALPPGWEERTDANGRTYYVNHIARCTQWERPT 98 (225)
Q Consensus 65 ~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~ 98 (225)
.+.+|.+|.+..+.+|+.||.|..++.++|+.|.
T Consensus 7 ~~~~~~~W~e~~~~~G~~YYyN~~T~eS~We~P~ 40 (41)
T 1ywi_A 7 VGSAKSMWTEHKSPDGRTYYYNTETKQSTWEKPD 40 (41)
T ss_dssp -----CCEEEEEETTTEEEEEETTTTEEEESCC-
T ss_pred CCCCCCCcEEEECCCCCEEEEECCCCCEEeCCCC
Confidence 3668999999999999999999999999999984
No 95
>1e0l_A Formin binding protein; SH3 domain, WW domain, FBP28, signal transduction; NMR {Mus musculus} SCOP: b.72.1.1 PDB: 2jup_W 2rly_W 2rm0_W 2nnt_A
Probab=97.45 E-value=0.0001 Score=41.08 Aligned_cols=31 Identities=35% Similarity=0.764 Sum_probs=28.5
Q ss_pred CCCCceeeeeCCCCcEEEeeecceeeecccc
Q psy8342 68 LPPGWEERTDANGRTYYVNHIARCTQWERPT 98 (225)
Q Consensus 68 LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~ 98 (225)
...+|.+..+.+|+.||.|..++.++|++|.
T Consensus 4 ~~~~W~e~~~~~G~~YYyN~~T~es~We~P~ 34 (37)
T 1e0l_A 4 AVSEWTEYKTADGKTYYYNNRTLESTWEKPQ 34 (37)
T ss_dssp SSCSCEEEECTTSCEEEEETTTTEEESSCCS
T ss_pred CCCCeEEEECCCCCEEEEECCCCCEEecCCC
Confidence 4578999999999999999999999999985
No 96
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=97.44 E-value=9.5e-05 Score=38.16 Aligned_cols=27 Identities=37% Similarity=0.683 Sum_probs=24.0
Q ss_pred CCceeeeeCCCCcEEEeeecceeeeccc
Q psy8342 70 PGWEERTDANGRTYYVNHIARCTQWERP 97 (225)
Q Consensus 70 ~gwe~~~d~~gr~~yv~~~~~~~~w~~P 97 (225)
+||+ .....|+.||.|..++.++|++|
T Consensus 1 ~gWe-~~~~~g~~YYyN~~T~~s~We~P 27 (27)
T 1e0n_A 1 PGWE-IIHENGRPLYYNAEQKTKLHYPP 27 (27)
T ss_dssp CCEE-EEESSSSEEEEETTTTEEESSCC
T ss_pred CCCe-EECCCCCeEEEECCCCCEeccCC
Confidence 5899 55689999999999999999987
No 97
>1o6w_A PRP40, PRE-mRNA processing protein PRP40; WW domain PAIR, nuclear protein, mRNA splicing, ribonucleoprotein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1 b.72.1.1
Probab=97.43 E-value=6.7e-05 Score=48.90 Aligned_cols=31 Identities=39% Similarity=0.863 Sum_probs=28.6
Q ss_pred CCceeeeeCCCCcEEEeeecceeeecccccc
Q psy8342 70 PGWEERTDANGRTYYVNHIARCTQWERPTVH 100 (225)
Q Consensus 70 ~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~~ 100 (225)
+||+++.+.+|++||+||.++.++|.+|...
T Consensus 2 ~~W~~~~~~~Gr~YY~n~~T~~s~W~~P~~~ 32 (75)
T 1o6w_A 2 SIWKEAKDASGRIYYYNTLTKKSTWEKPKEL 32 (75)
T ss_dssp CCEEEEECTTCCEEEEETTTTEEESSCCHHH
T ss_pred CCCeEEECCCCCeEEEECCCCCEEeecchhh
Confidence 5899999999999999999999999999754
No 98
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=96.95 E-value=0.00042 Score=45.09 Aligned_cols=30 Identities=33% Similarity=0.739 Sum_probs=28.1
Q ss_pred CCceeeeeCCCCcEEEeeecceeeeccccc
Q psy8342 70 PGWEERTDANGRTYYVNHIARCTQWERPTV 99 (225)
Q Consensus 70 ~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~ 99 (225)
.+|+++.+.+|++||+|+.++.++|.+|..
T Consensus 5 ~~W~e~~~~~G~~YYyN~~T~~s~We~P~~ 34 (75)
T 2jxw_A 5 GRWVEGITSEGYHYYYDLISGASQWEKPEG 34 (75)
T ss_dssp CCEEEEEETTTEEEEEETTTTEEECSCCSS
T ss_pred CCcEEEECCCCCEEEEECCCCCEeecCCCc
Confidence 579999999999999999999999999974
No 99
>2ysd_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=96.46 E-value=0.0027 Score=38.81 Aligned_cols=47 Identities=13% Similarity=0.019 Sum_probs=34.9
Q ss_pred CCCCCccccccCcccCCCCCeEEEeCCCCc--eeecCCcccccCccccCCCCCCC
Q psy8342 19 SDHETNLEVSRHRESADPDSWIIVDASTES--IVETPAQPLFIGGVEQQGALPPG 71 (225)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~LP~g 71 (225)
.+....||.+ |+.+.+..|..||.+++.. .|.+|+.. ...+.+||.|
T Consensus 9 ~~~~~~LP~G-We~~~~~~Gr~Yyinh~tk~TtWe~Pr~~-----~~~~~plp~g 57 (57)
T 2ysd_A 9 EDNLGPLPEN-WEMAYTENGEVYFIDHNTKTTSWLDPRCL-----NKQQSGPSSG 57 (57)
T ss_dssp CSCCCSCCSS-EEEEECSSCCEEEEETTTTEEESSCTTTC-----SSCCCSCCCC
T ss_pred CCCCCCCCcC-cEEEECCCCCEEEEECCCCcEecCCCCCc-----cccCCCCCCC
Confidence 3345568888 9999888899998888776 88998853 2345688876
No 100
>2zaj_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; BAI1-associated protein 1 (BAP-1); NMR {Homo sapiens}
Probab=95.52 E-value=0.0067 Score=35.84 Aligned_cols=39 Identities=21% Similarity=0.114 Sum_probs=31.2
Q ss_pred eecCCCCCccccccCcccCCCCCeEEEeCCCCc--eeecCCc
Q psy8342 16 LRLSDHETNLEVSRHRESADPDSWIIVDASTES--IVETPAQ 55 (225)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 55 (225)
+.+.|.+..||++ |+.+.++.|.+||.++..+ +|+.|+.
T Consensus 5 ~~~~~~~~~LP~G-We~~~d~~Gr~YYvnh~t~~T~We~P~~ 45 (49)
T 2zaj_A 5 SSGLDSELELPAG-WEKIEDPVYGIYYVDHINRKTQYENPSG 45 (49)
T ss_dssp CCCCCCSSCCCTT-EEEEEETTTEEEEEETTTTEEESSCCCS
T ss_pred ccccCCCCCCCcC-ceEEEcCCCCEEEEeCCCCCEecCCCCC
Confidence 3567777889988 9999888888998888776 7887764
No 101
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=95.45 E-value=0.0089 Score=45.33 Aligned_cols=34 Identities=26% Similarity=0.753 Sum_probs=30.5
Q ss_pred CCCCCCceeeee-CCCCcEEEeeecceeeeccccc
Q psy8342 66 GALPPGWEERTD-ANGRTYYVNHIARCTQWERPTV 99 (225)
Q Consensus 66 ~~LP~gwe~~~d-~~gr~~yv~~~~~~~~w~~P~~ 99 (225)
..||+||+.+.+ +.|+.||.+..++..+|..|..
T Consensus 6 ~~lp~~w~~~~s~s~~~~Yy~~~~~~~~~~~~~~~ 40 (177)
T 1yw5_A 6 TGLPPNWTIRVSRSHNKEYFLNQSTNESSWDPPYG 40 (177)
T ss_dssp CCCCTTEEEEECSSTTCEEEEETTTCCEESSCCTT
T ss_pred CCCCchHHHHhcccCCchhhhhHHHhhHhhcCccc
Confidence 569999999987 6799999999999999999864
No 102
>2dk1_A WW domain-binding protein 4; WBP-4, formin- binding protein 21, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=95.09 E-value=0.01 Score=35.14 Aligned_cols=29 Identities=34% Similarity=0.783 Sum_probs=26.4
Q ss_pred CceeeeeCCCCcEEEeeecceeeeccccc
Q psy8342 71 GWEERTDANGRTYYVNHIARCTQWERPTV 99 (225)
Q Consensus 71 gwe~~~d~~gr~~yv~~~~~~~~w~~P~~ 99 (225)
.|.+..+.+|+.||.|..++.++|+.|..
T Consensus 8 ~W~e~~s~~G~~YYyN~~T~eS~WekP~~ 36 (50)
T 2dk1_A 8 RWVEGITSEGYHYYYDLISGASQWEKPEG 36 (50)
T ss_dssp CEEECCCSTTCCCEEESSSCCEESSCCTT
T ss_pred CeEEEECCCCCEEEEECCCCCEEeeCChh
Confidence 59888888999999999999999999963
No 103
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=94.64 E-value=0.77 Score=35.76 Aligned_cols=62 Identities=15% Similarity=0.249 Sum_probs=46.3
Q ss_pred CCCCccCcccCceecCCCCCeeccEEEEEecCC---CcEEEEEEEEccCC----CCCceeEEEEEECcc
Q psy8342 143 NGDQTIDSALTKTRKKTLNPVWNEEFIFRVKPS---EHKLVFQVFDMNRL----TRDDFLGMVELSLLN 204 (225)
Q Consensus 143 ~~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~~---~~~L~v~V~d~d~~----~~d~~lG~~~i~l~~ 204 (225)
.|......++|.|...+.+|.|+|++.+.++.. ...|.|+++....- ..+..+|-+.+||-.
T Consensus 71 sg~~~~se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 71 AGDEAISEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp TCCSCBSCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred CCCCCceeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 344445578888998999999999999999865 36899999875432 122468999999854
No 104
>2yse_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI-1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.30 E-value=0.012 Score=36.21 Aligned_cols=37 Identities=22% Similarity=0.139 Sum_probs=30.3
Q ss_pred ecCCCCCccccccCcccCCCCCeEEEeCCCCc--eeecCC
Q psy8342 17 RLSDHETNLEVSRHRESADPDSWIIVDASTES--IVETPA 54 (225)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 54 (225)
++.|++.+||++ |+.+.++.|.+||.++... +|+.|+
T Consensus 6 ~~~d~~~~LP~G-WE~~~d~~Gr~YYvnh~tk~T~We~P~ 44 (60)
T 2yse_A 6 SGLDSELELPAG-WEKIEDPVYGIYYVDHINRKTQYENPV 44 (60)
T ss_dssp CCCCCCSSCCSS-EEEEECSSSCEEEEETTTTEEESSCHH
T ss_pred cccCCCCCCCCC-cEEEECCCCCEEEEeCCCCCeeccCCC
Confidence 466777889988 9999888899998888776 777776
No 105
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=94.30 E-value=0.027 Score=31.59 Aligned_cols=33 Identities=12% Similarity=0.029 Sum_probs=25.6
Q ss_pred CCCccccccCcccCCCCCeEEEeCCCCc--eeecCC
Q psy8342 21 HETNLEVSRHRESADPDSWIIVDASTES--IVETPA 54 (225)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 54 (225)
++..||++ |+.+.++.|.+||.++..+ +|.+|+
T Consensus 4 ~~~~LP~g-We~~~~~~Gr~Yy~nh~t~~ttW~~P~ 38 (40)
T 2ysg_A 4 GSSGLPYG-WEEAYTADGIKYFINHVTQTTSWIHPV 38 (40)
T ss_dssp SSSCCCTT-EEEEECSSSCEEEEESSSCCEECCCCC
T ss_pred CcCCCCCC-cEEEEcCCCCEEEEECCCCcCcCCCCC
Confidence 34568888 9999888899998887766 676664
No 106
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=94.09 E-value=0.36 Score=46.25 Aligned_cols=92 Identities=13% Similarity=0.197 Sum_probs=60.5
Q ss_pred ccceeEeeeeeecCCcCCCCCC--eeEEEEeCCCCccCc-ccCceecCCCCCeeccEEEEEecC----CCcEEEEEEEEc
Q psy8342 114 TEQIRLRIIAGHSLAKKDIFGA--RIDLNTVNGDQTIDS-ALTKTRKKTLNPVWNEEFIFRVKP----SEHKLVFQVFDM 186 (225)
Q Consensus 114 ~~~l~v~vi~a~~L~~~d~~g~--~~~~~~~~~~~~~~~-~kT~v~~~~~~P~Wne~f~f~v~~----~~~~L~v~V~d~ 186 (225)
...++|+|+.+.++........ .+.+.+..|...+.. .+|+.+ ...+|.|||.+.|++.- .+..|.|+||+.
T Consensus 354 ~~~f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~-~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~ 432 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRV-PCSNPRWNEWLNYDIYIPDLPRAARLCLSICSV 432 (1091)
T ss_dssp CSEEEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCC-CTTSCEEEEEEEEEEEGGGCCTTCEEEEEECCC
T ss_pred CCCEEEEEEEecCCCCCccccceEEEEEEEEECCEEccCceecccc-CCCCCCCCeeEEecCccccCChhcEEEEEEEEe
Confidence 4577899998887763321112 566667777766533 334333 35578899999999863 357899999986
Q ss_pred cCC----CCCceeEEEEEECcccC
Q psy8342 187 NRL----TRDDFLGMVELSLLNLP 206 (225)
Q Consensus 187 d~~----~~d~~lG~~~i~l~~l~ 206 (225)
... .....||.+.++|-+..
T Consensus 433 ~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 433 KGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCC-------CCEEEEEESBCTT
T ss_pred cCccCcccccceeEEeeeeeEccC
Confidence 542 12357999999987655
No 107
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.06 E-value=0.032 Score=35.52 Aligned_cols=29 Identities=24% Similarity=0.582 Sum_probs=26.5
Q ss_pred CceeeeeCCCCcEEEeeecceeeeccccc
Q psy8342 71 GWEERTDANGRTYYVNHIARCTQWERPTV 99 (225)
Q Consensus 71 gwe~~~d~~gr~~yv~~~~~~~~w~~P~~ 99 (225)
.|-+....+||+||.|..++.+.|+.|..
T Consensus 21 ~W~~v~T~dGR~fyyN~~Tk~S~WekP~e 49 (73)
T 2dk7_A 21 PWCVVWTGDERVFFYNPTTRLSMWDRPDD 49 (73)
T ss_dssp SCEEEEESSSCEEEEETTTTEECSSCCTT
T ss_pred CcEEEECCCCCEEEecCcccceeccCChH
Confidence 49888899999999999999999999863
No 108
>2ez5_W Dnedd4, E3 ubiquitin-protein ligase NEDD4; WW domain, PY motif, binding affinity, signalling protein,ligase; NMR {Drosophila melanogaster}
Probab=93.70 E-value=0.05 Score=31.53 Aligned_cols=33 Identities=12% Similarity=0.086 Sum_probs=26.5
Q ss_pred CCccccccCcccCCCCCeEEEeCCCCc--eeecCCc
Q psy8342 22 ETNLEVSRHRESADPDSWIIVDASTES--IVETPAQ 55 (225)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 55 (225)
+..||++ |+.+.++.|..||.++.++ +|.+|+.
T Consensus 8 ~~~LP~g-We~~~~~~Gr~Yyinh~t~~TtW~~Pr~ 42 (46)
T 2ez5_W 8 EEPLPPR-WSMQVAPNGRTFFIDHASRRTTWIDPRN 42 (46)
T ss_dssp SCCCCTT-EEEEECTTSSEEEEETTTTEEESBCTTT
T ss_pred CCCCCcC-cEEEEcCCCCEEEEECCCCCEeccCCCC
Confidence 4568887 9999888899988887776 7888874
No 109
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=93.53 E-value=0.41 Score=45.37 Aligned_cols=95 Identities=13% Similarity=0.306 Sum_probs=62.0
Q ss_pred CCccceeEeeeeeecCCcCCCCCCeeEEEEeCCCCccC-cccCceecCCCCCeeccEEEEEecC----CCcEEEEEEEEc
Q psy8342 112 EPTEQIRLRIIAGHSLAKKDIFGARIDLNTVNGDQTID-SALTKTRKKTLNPVWNEEFIFRVKP----SEHKLVFQVFDM 186 (225)
Q Consensus 112 ~~~~~l~v~vi~a~~L~~~d~~g~~~~~~~~~~~~~~~-~~kT~v~~~~~~P~Wne~f~f~v~~----~~~~L~v~V~d~ 186 (225)
.-...+.|+|+.+.++...+..-..+.+.+..|...+. ...|+.+....+|.|||.+.|++.- .+..|.|+||+.
T Consensus 214 ~~~~~f~i~i~~~~~~~~~~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 293 (940)
T 2wxf_A 214 SLEQPFSIELIEGRKVNADERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAV 293 (940)
T ss_dssp TCCSEEEEEEEEEECCCC---CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred hcCCceEEEEEEecccCCCCCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEEe
Confidence 44578899999999887543211144445566655442 2345555557789999999998863 357899999996
Q ss_pred cCC--C----------CCceeEEEEEECcccC
Q psy8342 187 NRL--T----------RDDFLGMVELSLLNLP 206 (225)
Q Consensus 187 d~~--~----------~d~~lG~~~i~l~~l~ 206 (225)
..- + .+..||.+.++|-+-.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 294 VEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp C----------------CEEEEEEEEESBCTT
T ss_pred cCCccCccccccccccccceEEEEeeeEECCc
Confidence 331 1 2348999999987654
No 110
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=93.10 E-value=0.057 Score=30.25 Aligned_cols=32 Identities=9% Similarity=-0.024 Sum_probs=24.7
Q ss_pred CCccccccCcccCCCCCeEEEeCCCCc--eeecCC
Q psy8342 22 ETNLEVSRHRESADPDSWIIVDASTES--IVETPA 54 (225)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 54 (225)
...||++ |+.+.++.|..||.++..+ +|.+|+
T Consensus 5 ~~~LP~g-We~~~~~~G~~Yy~nh~t~~ttw~~Pr 38 (40)
T 2ysf_A 5 SSGLPEG-WEMRFTVDGIPYFVDHNRRTTTYIDPR 38 (40)
T ss_dssp CCCCCSS-EEEEECTTCCEEEEETTTCCEESSCTT
T ss_pred cCCCCcC-cEEEEcCCCCEEEEECCCCcEecCCCC
Confidence 4568887 9999888898888877765 666664
No 111
>3le4_A Microprocessor complex subunit DGCR8; WW motif, dimerization, 3D domain swapping, heme binding, MI processing, heme, iron, metal-binding, nucleus; 1.70A {Homo sapiens}
Probab=92.35 E-value=0.14 Score=32.30 Aligned_cols=37 Identities=27% Similarity=0.608 Sum_probs=33.0
Q ss_pred ccCCCCCCCceeeeeCCCCcEEEeeecceeeeccccc
Q psy8342 63 EQQGALPPGWEERTDANGRTYYVNHIARCTQWERPTV 99 (225)
Q Consensus 63 ~~~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~ 99 (225)
...++||.||-...-..|-..|+...++..+|.+|-.
T Consensus 24 ~~~~~LPeGW~~v~H~SGmP~YlH~~trV~T~SrPY~ 60 (79)
T 3le4_A 24 PPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYF 60 (79)
T ss_dssp CCCCCCCTTEEEEECTTSSEEEEETTTTEEESSCCCC
T ss_pred CcCCcCCCccEEEEecCCceEEEeccceEEeccCCeE
Confidence 4458899999999999999999999999999999854
No 112
>2dmv_A Itchy homolog E3 ubiquitin protein ligase; WW domain, three stranded antiparallel beta sheet, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.31 E-value=0.093 Score=29.83 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=25.5
Q ss_pred CCccccccCcccCCCCCeEEEeCCCCc--eeecCCc
Q psy8342 22 ETNLEVSRHRESADPDSWIIVDASTES--IVETPAQ 55 (225)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 55 (225)
...||++ |++..++.|.+||-++... +|+.|+.
T Consensus 5 ~~~LP~G-We~~~d~~Gr~YY~n~~t~~T~We~P~~ 39 (43)
T 2dmv_A 5 SSGLPPG-WEQRVDQHGRVYYVDHVEKRTTWDRPSG 39 (43)
T ss_dssp CCSCCTT-EEEEECTTSCEEEEETTTCCEESSCSSS
T ss_pred CCCCCCC-ceEEECCCCCEEEEECCCCCEecCCcCC
Confidence 4568887 9999888888888777665 7887764
No 113
>2ysb_A Salvador homolog 1 protein; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: k.22.1.1
Probab=91.99 E-value=0.1 Score=30.67 Aligned_cols=32 Identities=6% Similarity=-0.140 Sum_probs=25.8
Q ss_pred CccccccCcccCCCCCeEEEeCCCCc--eeecCCc
Q psy8342 23 TNLEVSRHRESADPDSWIIVDASTES--IVETPAQ 55 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 55 (225)
..||++ |+.+.++.|..||.+++++ +|.+|+.
T Consensus 10 ~~LP~g-We~~~~~~Gr~Yy~nh~t~~T~W~~P~~ 43 (49)
T 2ysb_A 10 LPLPPG-WSVDWTMRGRKYYIDHNTNTTHWSHPLE 43 (49)
T ss_dssp CCCCTT-EEEEECSSSCEEEEETTTTEEESSCTTT
T ss_pred CCCCCC-ceEEECCCCCEEEEEcCCCCEEecCCCC
Confidence 358887 9999988899998888776 7888863
No 114
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens}
Probab=91.92 E-value=0.08 Score=29.23 Aligned_cols=31 Identities=13% Similarity=0.004 Sum_probs=23.8
Q ss_pred CccccccCcccCCCCCeEEEeCCCCc--eeecCC
Q psy8342 23 TNLEVSRHRESADPDSWIIVDASTES--IVETPA 54 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 54 (225)
..||++ |+.+.++.|..||.++.+. +|.+|+
T Consensus 5 ~~LP~g-We~~~~~~G~~Yy~nh~t~~ttW~~Pr 37 (38)
T 2law_A 5 GPLPDG-WEQAMTQDGEIYYINHKNKTTSWLDPR 37 (38)
T ss_dssp CCCSSS-CCEEEETTTEEEEEETTTTEEESSCTT
T ss_pred CCCCCC-cEEEECCCCCEEEEECCCCCEeCCCCC
Confidence 458887 9999888899998887765 666653
No 115
>2kpz_A E3 ubiquitin-protein ligase NEDD4; WW domain, HTLV1, NEDD4, human modular domain, complex, HOST interaction, ligase; NMR {Homo sapiens} PDB: 2kq0_A 2laj_A*
Probab=91.67 E-value=0.083 Score=30.99 Aligned_cols=34 Identities=12% Similarity=0.048 Sum_probs=25.6
Q ss_pred CCccccccCcccCCCCCeEEEeCCCCc--eeecCCcc
Q psy8342 22 ETNLEVSRHRESADPDSWIIVDASTES--IVETPAQP 56 (225)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 56 (225)
...||++ |+++.++.|..||.++.+. +|..|+..
T Consensus 10 ~~~LP~g-We~~~~~~G~~Yy~nh~T~~ttWe~Pr~~ 45 (49)
T 2kpz_A 10 QGFLPKG-WEVRHAPNGRPFFIDHNTKTTTWEDPRLK 45 (49)
T ss_dssp --CCCTT-EEEEECTTSCEEEEETTTTEEESSCTTCC
T ss_pred CCCCCCC-cEEEECCCCCEEEEECCCCCEecCCCCCC
Confidence 3458877 9999888898888887776 78888743
No 116
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=91.65 E-value=0.84 Score=43.35 Aligned_cols=94 Identities=18% Similarity=0.183 Sum_probs=58.5
Q ss_pred CccceeEeeeeeecCCcCCCCCC--eeEEEEeCCCCccCcccCceecCCCCCeeccEEEEEecC----CCcEEEEEEEEc
Q psy8342 113 PTEQIRLRIIAGHSLAKKDIFGA--RIDLNTVNGDQTIDSALTKTRKKTLNPVWNEEFIFRVKP----SEHKLVFQVFDM 186 (225)
Q Consensus 113 ~~~~l~v~vi~a~~L~~~d~~g~--~~~~~~~~~~~~~~~~kT~v~~~~~~P~Wne~f~f~v~~----~~~~L~v~V~d~ 186 (225)
-...++|+|+.+........... .+.+.+..|...+...+|..+.-+.+|.|||.+.|++.- .+..|.|+||+.
T Consensus 216 ~~~~f~i~i~~~~~~~~~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 216 CDRKFRVKIRGIDIPVLPRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp CCSEEEEEEEEEECSSCCTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred ccCceEEEEeecccccccCCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 34667788887754221111111 344445667655544556555556689999999998763 357899999985
Q ss_pred cCCC----------------CCceeEEEEEECcccC
Q psy8342 187 NRLT----------------RDDFLGMVELSLLNLP 206 (225)
Q Consensus 187 d~~~----------------~d~~lG~~~i~l~~l~ 206 (225)
...+ +...||.+.++|-+..
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 296 AKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp EC--------------------CEEEEEEEESBCTT
T ss_pred ccCccccccccccccccccccceeEEEEeeeeecCC
Confidence 4321 2347999999887655
No 117
>1i5h_W Rnedd4, ubiquitin ligase NEDD4; NEDD4, WW domains, ENAC, PY motif, liddle syndrome, proline-rich, ligase; NMR {Rattus norvegicus} SCOP: b.72.1.1 PDB: 1yiu_A 2jo9_A 2joc_A*
Probab=91.48 E-value=0.11 Score=30.57 Aligned_cols=33 Identities=15% Similarity=0.081 Sum_probs=26.3
Q ss_pred CCccccccCcccCCCCCeEEEeCCCCc--eeecCCc
Q psy8342 22 ETNLEVSRHRESADPDSWIIVDASTES--IVETPAQ 55 (225)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 55 (225)
...||++ |+.+.+..|..||.++... +|..|+.
T Consensus 9 ~~~LP~g-We~~~~~~Gr~Yy~nh~t~~T~We~Pr~ 43 (50)
T 1i5h_W 9 LGPLPPG-WEERTHTDGRVFFINHNIKKTQWEDPRM 43 (50)
T ss_dssp CSSCSTT-EEEEECTTSCEEEEETTTTEEESSCTTT
T ss_pred CCCCCcC-cEEEEcCCCCEEEEECCCCCEEeeCCCC
Confidence 4568888 9999888898888888776 8888873
No 118
>1wr4_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} PDB: 2lb2_A*
Probab=91.41 E-value=0.1 Score=28.27 Aligned_cols=30 Identities=13% Similarity=0.111 Sum_probs=22.4
Q ss_pred CccccccCcccCCCCCeEEEeCCCCc--eeecC
Q psy8342 23 TNLEVSRHRESADPDSWIIVDASTES--IVETP 53 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 53 (225)
..||++ |++..++.|-.|+.++... +|+.|
T Consensus 3 ~~LP~g-We~~~d~~g~~Yy~n~~t~~t~W~~P 34 (36)
T 1wr4_A 3 PGLPSG-WEERKDAKGRTYYVNHNNRTTTWTRP 34 (36)
T ss_dssp TTCCTT-EEEEECSSSCEEEEETTTTEEESSCC
T ss_pred CCCCCC-CEEEECCCCCEEEEECCCCCEeCcCC
Confidence 457877 9999888888888777664 66555
No 119
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus}
Probab=90.86 E-value=0.13 Score=27.92 Aligned_cols=30 Identities=13% Similarity=0.025 Sum_probs=22.3
Q ss_pred CccccccCcccCCCCCeEEEeCCCCc--eeecC
Q psy8342 23 TNLEVSRHRESADPDSWIIVDASTES--IVETP 53 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 53 (225)
..||++ |++..++.|..||-++.+. +|+.|
T Consensus 3 ~~LP~G-We~~~d~~G~~Yy~n~~t~~t~We~P 34 (36)
T 1wr3_A 3 PPLPPG-WEEKVDNLGRTYYVNHNNRSTQWHRP 34 (36)
T ss_dssp SCSCTT-EEEEECSSSCEEEEETTTCCEESSCS
T ss_pred CCCCCC-CEEEECCCCCEEEEECCCCCEeeeCc
Confidence 457877 9999888888888776654 66655
No 120
>2ysh_A GAS-7, growth-arrest-specific protein 7; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=90.83 E-value=0.21 Score=27.71 Aligned_cols=32 Identities=16% Similarity=0.170 Sum_probs=23.9
Q ss_pred CCccccccCcccCCCCCeEEEeCCCCc--eeecCC
Q psy8342 22 ETNLEVSRHRESADPDSWIIVDASTES--IVETPA 54 (225)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 54 (225)
...||++ |++..++.|.+||-++... +|+.|.
T Consensus 5 ~~~LP~g-W~~~~d~~Gr~YY~n~~T~~t~We~P~ 38 (40)
T 2ysh_A 5 SSGLPPG-WQSYLSPQGRRYYVNTTTNETTWERPS 38 (40)
T ss_dssp CSSCCTT-CEEEECTTSCEEEECSSSCCEESSSCC
T ss_pred CCCCCCC-ceEEECCCCCEEEEECCCCCEeCCCCC
Confidence 3558877 9999888898888777654 676664
No 121
>2l4j_A YES-associated protein 2 (YAP2); WW domain, medaka, transcription; NMR {Oryzias latipes}
Probab=90.54 E-value=0.19 Score=29.04 Aligned_cols=32 Identities=13% Similarity=0.075 Sum_probs=25.4
Q ss_pred CCccccccCcccCCCCCeEEEeCCCCc--eeecCC
Q psy8342 22 ETNLEVSRHRESADPDSWIIVDASTES--IVETPA 54 (225)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 54 (225)
+..||++ |+.+.++.|-+||.++..+ +|.+|+
T Consensus 9 ~~~LP~g-We~~~~~~G~~Yyinh~t~~TtWe~Pr 42 (46)
T 2l4j_A 9 SGPLPEG-WEQAITPEGEIYYINHKNKTTSWLDPR 42 (46)
T ss_dssp TSCCCTT-CEEEECTTSCEEEEETTTTEEECSCCS
T ss_pred CCCCCcC-ceeEECCCCCEEEEECCCCCEeCCCCC
Confidence 4568887 9999888898888887776 777776
No 122
>2ho2_A Fe65 protein, amyloid beta A4 protein-binding family B member 1; WW domain, beta sheet, Fe65, protein binding; 1.33A {Homo sapiens} SCOP: b.72.1.1 PDB: 2idh_A* 2oei_A
Probab=90.51 E-value=0.12 Score=28.56 Aligned_cols=30 Identities=13% Similarity=0.087 Sum_probs=22.3
Q ss_pred ccccccCcccCCCCCeEEEeCCCCc--eeecCCc
Q psy8342 24 NLEVSRHRESADPDSWIIVDASTES--IVETPAQ 55 (225)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 55 (225)
.||++ |+++.+..| .||-++... +|+.|+.
T Consensus 3 ~LP~G-We~~~d~~g-~YY~n~~t~~tqWe~P~~ 34 (38)
T 2ho2_A 3 DLPAG-WMRVQDTSG-TYYWHIPTGTTQWEPPGR 34 (38)
T ss_dssp CSCTT-EEEEECSSC-EEEEETTTTEEESSCCCC
T ss_pred cCCCC-ceEEEeCCC-CEEEecCCCCEeccCCCC
Confidence 47888 999988888 777665554 7877763
No 123
>2djy_A SMAD ubiquitination regulatory factor 2; beta sheet, polyproline type II helix, PPII, ligase/signaling protein complex; NMR {Homo sapiens} PDB: 2lb1_A
Probab=90.40 E-value=0.14 Score=28.90 Aligned_cols=32 Identities=6% Similarity=-0.004 Sum_probs=25.0
Q ss_pred CccccccCcccCCCCCeEEEeCCCCc--eeecCCc
Q psy8342 23 TNLEVSRHRESADPDSWIIVDASTES--IVETPAQ 55 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 55 (225)
..||.+ |+.+.+..|.+||.++... +|..|+.
T Consensus 6 ~~LP~G-We~~~~~~G~~Yy~nh~t~~ttW~~Pr~ 39 (42)
T 2djy_A 6 GPLPPG-WEIRNTATGRVYFVDHNNRTTQFTDPRL 39 (42)
T ss_dssp SCCCSS-EEEEECSSSCEEEEETTTTEEESSCTTT
T ss_pred CCCCcC-cEEEECCCCCEEEEECCCCCEeCCCCCC
Confidence 458887 9999888898888887776 7777763
No 124
>2kyk_A E3 ubiquitin-protein ligase itchy homolog; LMP2A, PY motif, WW domain; NMR {Homo sapiens}
Probab=90.22 E-value=0.28 Score=27.07 Aligned_cols=31 Identities=13% Similarity=0.028 Sum_probs=24.0
Q ss_pred CccccccCcccCCCCCeEEEeCCCCc--eeecCC
Q psy8342 23 TNLEVSRHRESADPDSWIIVDASTES--IVETPA 54 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 54 (225)
..||++ |++..++.|..||-++.+. +|..|+
T Consensus 5 ~~LP~g-We~~~d~~G~~YY~n~~t~~t~We~P~ 37 (39)
T 2kyk_A 5 GPLPPG-WERRVDNMGRIYYVDHFTRTTTWQRPT 37 (39)
T ss_dssp CCCCSS-CEEEECTTSCEEEECSSSCCEECCCCC
T ss_pred CCCCCC-cEEEEcCCCCEEEEECCCCCEeccCCC
Confidence 457887 9999888898888887765 676664
No 125
>1wr7_A NEDD4-2; all-beta, ligase; NMR {Mus musculus}
Probab=89.38 E-value=0.16 Score=28.46 Aligned_cols=31 Identities=13% Similarity=0.083 Sum_probs=23.5
Q ss_pred CccccccCcccCCCCCeEEEeCCCCc--eeecCC
Q psy8342 23 TNLEVSRHRESADPDSWIIVDASTES--IVETPA 54 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 54 (225)
..||.+ |++..++.|..||-++.+. +|..|+
T Consensus 7 ~~LP~g-We~~~~~~G~~Yy~n~~t~~t~We~Pr 39 (41)
T 1wr7_A 7 SFLPPG-WEMRIAPNGRPFFIDHNTKTTTWEDPR 39 (41)
T ss_dssp CSSCTT-EEEEECTTSCEEEEETTTTEEESSCGG
T ss_pred CCCCCC-cEEEEcCCCCEEEEECCCCCeecCCCC
Confidence 457777 9999888888888777765 676664
No 126
>2dwv_A Salvador homolog 1 protein; WW domain, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=89.34 E-value=0.15 Score=29.85 Aligned_cols=32 Identities=9% Similarity=0.010 Sum_probs=25.7
Q ss_pred CccccccCcccCCCCCeEEEeCCCCc--eeecCCc
Q psy8342 23 TNLEVSRHRESADPDSWIIVDASTES--IVETPAQ 55 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 55 (225)
.+||++ |+.+.++.|-+||.++... +|+.|+.
T Consensus 12 ~~LP~G-We~~~d~~g~~YYvnh~t~~T~We~P~~ 45 (49)
T 2dwv_A 12 EGLPPG-WERVESSEFGTYYVDHTNKRAQYRHPSG 45 (49)
T ss_dssp SCCCTT-EEEEEETTTEEEEEETTTTEEESSCCCC
T ss_pred CCCCcC-cEEEECCCCCEEEEECCCCCEeccCcCC
Confidence 568888 9999888888888887776 7777764
No 127
>2jmf_A E3 ubiquitin-protein ligase suppressor of deltex; WW domain, solution, complex, ligase/signaling protein complex; NMR {Drosophila melanogaster} SCOP: b.72.1.1 PDB: 2op7_A
Probab=89.32 E-value=0.2 Score=29.92 Aligned_cols=33 Identities=12% Similarity=-0.000 Sum_probs=25.8
Q ss_pred CCccccccCcccCCCCCeEEEeCCCCc--eeecCCc
Q psy8342 22 ETNLEVSRHRESADPDSWIIVDASTES--IVETPAQ 55 (225)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 55 (225)
+..||++ |+.+.+..|..||.+++++ .|..|+.
T Consensus 16 ~~~LP~G-We~~~~~~Gr~Yyinh~tk~TtW~dPr~ 50 (53)
T 2jmf_A 16 EGPLPPG-WEIRYTAAGERFFVDHNTRRTTFEDPRP 50 (53)
T ss_dssp CSCCCTT-EEEEECTTSCEEEEETTTCCEESSCCCS
T ss_pred CCCCCcC-cEEEEcCCCCEEEEeCCCCcEecCCCCC
Confidence 4568888 9999888899888887776 7777763
No 128
>1wmv_A WWOX, WW domain containing oxidoreductase; all-beta, apoptosis; NMR {Homo sapiens}
Probab=89.16 E-value=0.36 Score=28.85 Aligned_cols=34 Identities=9% Similarity=0.125 Sum_probs=26.3
Q ss_pred CCccccccCcccCCCCCeEEEeCCCCc--eeecCCcc
Q psy8342 22 ETNLEVSRHRESADPDSWIIVDASTES--IVETPAQP 56 (225)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 56 (225)
...||.+ |+.+.++.|-.||.+++.. +|..|+.+
T Consensus 9 ~~~LP~G-We~~~~~~G~~Yyinh~tk~TtwedPr~~ 44 (54)
T 1wmv_A 9 AGDLPYG-WEQETDENGQVFFVDHINKRTTYLDPRLA 44 (54)
T ss_dssp SSCSCTT-EEEEECTTSCEEEEESSSCCEESSCTTSS
T ss_pred CCCCCcC-cEEEECCCCCEEEEeCCCCCEeecCCCCc
Confidence 3468888 9999888888888777765 78888754
No 129
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=88.96 E-value=0.61 Score=44.82 Aligned_cols=95 Identities=12% Similarity=0.309 Sum_probs=59.1
Q ss_pred CCccceeEeeeeeecCCcCCCCCCeeEEEEeCCCCccC-cccCceecCCCCCeeccEEEEEecCC----CcEEEEEEEEc
Q psy8342 112 EPTEQIRLRIIAGHSLAKKDIFGARIDLNTVNGDQTID-SALTKTRKKTLNPVWNEEFIFRVKPS----EHKLVFQVFDM 186 (225)
Q Consensus 112 ~~~~~l~v~vi~a~~L~~~d~~g~~~~~~~~~~~~~~~-~~kT~v~~~~~~P~Wne~f~f~v~~~----~~~L~v~V~d~ 186 (225)
.....+.|+|..+.++...+.....+.+.+..|...+. ...|+.+.-..+|.|||.+.|++.-. +..|.|+||+.
T Consensus 350 ~~~~~f~i~i~~~~~~~~~~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~ 429 (1092)
T 2y3a_A 350 DNNNPFQITLVKGNKLNTEETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAV 429 (1092)
T ss_dssp CCCSEEEEEECCCCCCCCCSSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC
T ss_pred hcCCCEEEEEEEeccCCCCCCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEe
Confidence 34578889999998887543221134444555554432 23455555577899999999988643 47899999986
Q ss_pred cCC----------------------CCCceeEEEEEECcccC
Q psy8342 187 NRL----------------------TRDDFLGMVELSLLNLP 206 (225)
Q Consensus 187 d~~----------------------~~d~~lG~~~i~l~~l~ 206 (225)
... +....||.+.++|-+-.
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 471 (1092)
T 2y3a_A 430 LDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFK 471 (1092)
T ss_dssp ------------------------------CCEEEEESBCTT
T ss_pred cCccccccccccccccccccccccccccceeEEEeeeeECCc
Confidence 311 01237899988887644
No 130
>3l4h_A E3 ubiquitin-protein ligase HECW1; E3 ligase, WW domain, UBL-conjugation pathway, structural GE structural genomics consortium, SGC, coiled coil; HET: MSE; 1.80A {Homo sapiens}
Probab=87.46 E-value=0.33 Score=33.44 Aligned_cols=35 Identities=11% Similarity=0.045 Sum_probs=28.0
Q ss_pred CCCCccccccCcccCCCCCeEEEeCCCCc--eeecCCc
Q psy8342 20 DHETNLEVSRHRESADPDSWIIVDASTES--IVETPAQ 55 (225)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 55 (225)
+.+..||+| ||.+.++.|..|+.+|+.. .|..|+.
T Consensus 68 d~~~pLP~G-WE~r~d~~Gr~YfIdH~tktTtW~dPRl 104 (109)
T 3l4h_A 68 DTRLELPRG-WEIKTDQQGKSFFVDHNSRATTFIDPRI 104 (109)
T ss_dssp CTTSCCCTT-EEEEECTTCCEEEEETTTTEEESSCSCC
T ss_pred CCCCCCCCC-CeEEECCCCCEEEEeCCCCCEeeCCCCc
Confidence 334568888 9999999999999888876 7777764
No 131
>1jmq_A YAP65, 65 kDa YES-associated protein; polyproline ligand, YAP65 mutant, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1k9q_A* 1k9r_A 1k5r_A* 2lax_A* 2lay_A*
Probab=87.19 E-value=0.4 Score=27.47 Aligned_cols=32 Identities=6% Similarity=0.068 Sum_probs=25.8
Q ss_pred CccccccCcccCCCCCeEEEeCCCCc--eeecCCc
Q psy8342 23 TNLEVSRHRESADPDSWIIVDASTES--IVETPAQ 55 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 55 (225)
..||++ |+...+++|..++-++.++ +|..|+.
T Consensus 7 ~~LP~G-We~~~~~~gr~y~~n~~t~~t~W~dPr~ 40 (46)
T 1jmq_A 7 VPLPAG-WEMAKTSSGQRYFKNHIDQTTTWQDPRK 40 (46)
T ss_dssp CCCCTT-BCCBCCSSCCCBEEETTTTEEESSCTTT
T ss_pred CCCCcC-cEEEEcCCCceEEEEecCCceeecCCCc
Confidence 468888 9999888888887778777 8888874
No 132
>2jv4_A Peptidyl-prolyl CIS/trans isomerase; ppiase domain, WW domain group IV, rotamase; NMR {Emericella nidulans}
Probab=82.18 E-value=0.92 Score=27.03 Aligned_cols=32 Identities=16% Similarity=0.055 Sum_probs=23.2
Q ss_pred CccccccCcccCCC-CCeEEEeCCCCc--eeecCCc
Q psy8342 23 TNLEVSRHRESADP-DSWIIVDASTES--IVETPAQ 55 (225)
Q Consensus 23 ~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 55 (225)
..||++ |+.+.+. .|..||-++.+. +|+.|+.
T Consensus 6 ~~LP~G-W~~~~~~~~Gr~YY~N~~T~~sqWe~P~~ 40 (54)
T 2jv4_A 6 TGLPAG-WEVRHSNSKNLPYYFNPATRESRWEPPAD 40 (54)
T ss_dssp CCCCSS-CCEEECSSSSCEEEEETTTTEEESSCCTT
T ss_pred CCCCCC-cEEEEECCCCCEEEEECCCCcEEecCCCC
Confidence 458888 9998765 687777666554 8887763
No 133
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=70.89 E-value=12 Score=27.45 Aligned_cols=57 Identities=14% Similarity=0.216 Sum_probs=43.2
Q ss_pred cccCceecCCCCCeeccEEEEEecCCC--------cEEEEEEEEccCCCCCceeEEEEEECcccCCC
Q psy8342 150 SALTKTRKKTLNPVWNEEFIFRVKPSE--------HKLVFQVFDMNRLTRDDFLGMVELSLLNLPRE 208 (225)
Q Consensus 150 ~~kT~v~~~~~~P~Wne~f~f~v~~~~--------~~L~v~V~d~d~~~~d~~lG~~~i~l~~l~~~ 208 (225)
...|.+.. +.+|.+|-+-.|.|...+ ..|.|+++... .+.-..||.+.|+|.++...
T Consensus 55 tq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lELhqa~-g~~~~tla~~~I~l~~lLe~ 119 (156)
T 2yrb_A 55 LQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQAY-STEYETIAACQLKFHEILEK 119 (156)
T ss_dssp CEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEEEEC-SSCEEEEEEEEECCSHHHHC
T ss_pred eeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEEEEee-CCCceEEEEEEEEhHHhhCc
Confidence 45566555 889999999999986543 57888888764 23456899999999988744
No 134
>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}
Probab=66.98 E-value=2.5 Score=36.35 Aligned_cols=33 Identities=9% Similarity=0.081 Sum_probs=27.9
Q ss_pred CccccccCcccCCCCCeEEEeCCCCc--eeecCCcc
Q psy8342 23 TNLEVSRHRESADPDSWIIVDASTES--IVETPAQP 56 (225)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 56 (225)
..+|++ |+.+.++.|+.|+.+|+.+ .|.+|+.+
T Consensus 7 ~~lP~g-We~~~~~~g~~y~i~h~~~~t~w~~Pr~~ 41 (429)
T 3olm_A 7 GPLPSG-WEMRLTNTARVYFVDHNTKTTTWDDPRLP 41 (429)
T ss_dssp CCCCTT-CCCCCSSCCCCCEEETTTTEEESSCTTSC
T ss_pred CCCCCC-ceeEECCCCCeEEEeCCCcceeccCCCCC
Confidence 347888 9999999999999888887 88899864
No 135
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=65.46 E-value=1.9 Score=34.51 Aligned_cols=30 Identities=7% Similarity=0.078 Sum_probs=26.1
Q ss_pred ccccccCcccCCCCCeEEEeCCCCc--eeecCC
Q psy8342 24 NLEVSRHRESADPDSWIIVDASTES--IVETPA 54 (225)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 54 (225)
.+|++ |+.+.+++|..||.+|++. +|.||.
T Consensus 11 ~l~~~-we~~~~~~~~~y~~~h~~~tt~w~~p~ 42 (261)
T 1eg3_A 11 SVQGP-WERAISPNKVPYYINHETQTTCWDHPK 42 (261)
T ss_dssp TCCTT-EEEEECTTSCEEEEETTTTEEESSCHH
T ss_pred CCCCC-cceeECCCCCeEeecCCcccccCCCCc
Confidence 47777 9999999999999999887 888887
No 136
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=57.99 E-value=3.7 Score=30.35 Aligned_cols=33 Identities=9% Similarity=0.054 Sum_probs=22.4
Q ss_pred CccccccCcccCCC-CCeEEEeCCCCc--eeecCCcc
Q psy8342 23 TNLEVSRHRESADP-DSWIIVDASTES--IVETPAQP 56 (225)
Q Consensus 23 ~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~ 56 (225)
..||++ |+.+.++ .|.+||-++.+. +|+.|+.|
T Consensus 8 ~~LP~g-We~~~~~~~g~~yy~n~~t~~t~We~P~~~ 43 (166)
T 3tc5_A 8 EKLPPG-WEKAMSRSSGRVYYFNHITNASQWERPSGN 43 (166)
T ss_dssp --CCTT-EEEEECTTTCCEEEEETTTCCEESSCC---
T ss_pred CCCCCC-ceEEEcCCCCCEEEEECCCCCEEecCCCCC
Confidence 348888 9999884 788888776655 89888754
No 137
>2khr_A Protein MBTH; siderophores, mycobactin, MTBH-like, 2-hydroxyphenyloxazolin tuberculosis, biosynthetic protein, structural genomics; NMR {Mycobacterium tuberculosis}
Probab=20.59 E-value=60 Score=20.43 Aligned_cols=47 Identities=11% Similarity=0.364 Sum_probs=28.3
Q ss_pred eEEEeCCCCc--eeecCCcccccCccccCCCCCCCceeeeeCCCCcEEEeeecceeeeccccc
Q psy8342 39 WIIVDASTES--IVETPAQPLFIGGVEQQGALPPGWEERTDANGRTYYVNHIARCTQWERPTV 99 (225)
Q Consensus 39 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~LP~gwe~~~d~~gr~~yv~~~~~~~~w~~P~~ 99 (225)
|.+|.++..+ .|. .-..+|.||+.......|--+++++. ..|.+.+.
T Consensus 16 f~VlvN~E~QySLWP------------~~~~vP~GW~~v~~~~sr~~CL~yIe--~~WtDmRP 64 (74)
T 2khr_A 16 FFVLVNDEDQHSLWP------------VFADIPAGWRVVHGEASRAACLDYVE--KNWTDLRP 64 (74)
T ss_dssp EEEEEETTCSCEEEE------------TTSCCCSSEEEEECSCCHHHHHHHHH--HHHHSCCC
T ss_pred EEEEEcCCCccccCc------------CcCCCCCCcccCCCCCCHHHHHHHHH--hhhcCCCc
Confidence 7777777665 342 12679999998876655554444332 35666543
Done!