Query psy8348
Match_columns 622
No_of_seqs 571 out of 3303
Neff 7.8
Searched_HMMs 29240
Date Sat Aug 17 01:25:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8348.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8348hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i7t_A Cleavage and polyadenyl 100.0 2.2E-79 7.4E-84 674.8 48.3 446 2-447 14-459 (459)
2 3iek_A Ribonuclease TTHA0252; 100.0 7.8E-77 2.7E-81 648.3 47.4 423 2-444 3-431 (431)
3 2xr1_A Cleavage and polyadenyl 100.0 8.5E-66 2.9E-70 586.0 45.4 433 2-444 186-639 (640)
4 3af5_A Putative uncharacterize 100.0 8.7E-66 3E-70 587.4 44.7 433 2-444 191-650 (651)
5 2ycb_A Beta-CAsp RNAse, cleava 100.0 1.8E-65 6.3E-70 583.7 45.8 434 2-444 182-635 (636)
6 2i7x_A Protein CFT2; polyadeny 100.0 2.1E-53 7.4E-58 487.2 37.5 350 2-357 3-382 (717)
7 3zq4_A Ribonuclease J 1, RNAse 100.0 5.7E-50 1.9E-54 448.2 28.5 383 2-445 11-425 (555)
8 3bk2_A RNAse J, metal dependen 100.0 2.4E-47 8.3E-52 428.6 32.7 388 2-446 19-441 (562)
9 2az4_A Hypothetical protein EF 100.0 3.5E-40 1.2E-44 359.5 23.0 378 2-444 9-429 (429)
10 3zdk_A 5' exonuclease apollo; 100.0 4.7E-32 1.6E-36 284.7 25.2 270 50-410 23-304 (336)
11 4b87_A DNA cross-LINK repair 1 100.0 1.1E-31 3.8E-36 285.3 26.7 312 13-408 26-345 (367)
12 1zkp_A Hypothetical protein BA 99.8 6.7E-20 2.3E-24 186.4 16.0 165 2-198 27-205 (268)
13 2cbn_A Ribonuclease Z; phospho 99.8 6.1E-20 2.1E-24 190.2 13.9 172 2-198 4-239 (306)
14 1y44_A Ribonuclease Z; zinc-de 99.8 7.6E-20 2.6E-24 190.9 14.6 173 2-199 3-238 (320)
15 3g1p_A Protein PHNP; C-P lyase 99.8 2.1E-19 7.2E-24 182.0 11.3 156 11-198 37-193 (258)
16 3zwf_A Zinc phosphodiesterase 99.8 2.7E-18 9.2E-23 182.8 12.6 189 2-198 3-279 (368)
17 3md7_A Beta-lactamase-like; ss 99.7 2.2E-17 7.5E-22 170.3 11.8 171 2-197 31-235 (293)
18 2e7y_A TRNAse Z; tRNA maturati 99.7 1.4E-16 4.7E-21 162.5 17.4 207 14-259 13-272 (280)
19 3kl7_A Putative metal-dependen 99.6 1.1E-14 3.6E-19 145.4 20.9 137 12-194 36-183 (235)
20 3jxp_A Coenzyme PQQ synthesis 99.6 3E-16 1E-20 163.8 8.8 167 11-197 39-227 (321)
21 3m8t_A 'BLR6230 protein; subcl 99.6 1.4E-15 4.9E-20 156.1 9.4 146 11-170 53-205 (294)
22 2r2d_A AGR_PTI_140P, Zn-depend 99.6 3.1E-15 1.1E-19 152.3 10.8 150 11-172 41-218 (276)
23 3esh_A Protein similar to meta 99.6 1.4E-15 4.7E-20 155.6 6.7 152 10-173 45-212 (280)
24 1k07_A FEZ-1 beta-lactamase; m 99.6 5.8E-15 2E-19 149.4 10.3 147 12-170 24-177 (263)
25 3rpc_A Possible metal-dependen 99.5 3E-14 1E-18 144.5 13.7 153 12-195 11-193 (264)
26 3adr_A Putative uncharacterize 99.5 9.3E-14 3.2E-18 140.0 15.9 143 8-171 15-169 (261)
27 3dha_A N-acyl homoserine lacto 99.5 8.7E-15 3E-19 147.2 8.1 143 9-173 35-201 (254)
28 2wyl_A L-ascorbate-6-phosphate 99.5 2.6E-13 9E-18 143.9 18.8 158 12-194 44-250 (360)
29 3l6n_A Metallo-beta-lactamase; 99.5 4.4E-15 1.5E-19 145.8 4.7 132 10-170 28-161 (219)
30 2xf4_A Hydroxyacylglutathione 99.5 1.5E-14 5.3E-19 141.0 7.1 142 11-171 11-155 (210)
31 3bv6_A Metal-dependent hydrola 99.5 4.7E-13 1.6E-17 143.0 18.9 158 12-194 68-275 (379)
32 4dik_A Flavoprotein; TM0755, e 99.5 1.3E-13 4.5E-18 148.3 13.6 128 13-169 52-182 (410)
33 1ztc_A Hypothetical protein TM 99.5 1.5E-14 5.1E-19 142.7 5.3 145 10-171 32-178 (221)
34 4ax1_B Metallo-beta-lactamase 99.5 3.1E-14 1.1E-18 146.5 6.0 148 11-170 56-209 (303)
35 1m2x_A Class B carbapenemase B 99.5 2.8E-14 9.5E-19 140.7 4.9 132 10-170 24-157 (223)
36 1sml_A Protein (penicillinase) 99.5 1.1E-13 3.7E-18 140.5 9.1 145 12-170 37-187 (269)
37 4hl2_A Beta-lactamase NDM-1; s 99.4 3.6E-15 1.2E-19 149.1 -2.6 145 5-170 40-184 (243)
38 2bib_A CBPE, teichoic acid pho 99.4 2.2E-13 7.5E-18 152.5 10.7 224 2-259 8-280 (547)
39 2zwr_A Metallo-beta-lactamase 99.4 1.2E-13 4.1E-18 134.6 7.3 145 3-171 4-148 (207)
40 1p9e_A Methyl parathion hydrol 99.4 9.1E-14 3.1E-18 145.8 6.4 155 12-172 96-260 (331)
41 1e5d_A Rubredoxin\:oxygen oxid 99.4 8E-14 2.7E-18 149.7 6.1 132 11-169 33-167 (402)
42 3iog_A Beta-lactamase; hydrola 99.4 4.9E-14 1.7E-18 138.9 4.0 152 4-169 14-167 (227)
43 1mqo_A Beta-lactamase II; alph 99.4 5.3E-14 1.8E-18 139.1 4.1 131 11-170 39-171 (227)
44 2zo4_A Metallo-beta-lactamase 99.4 2.3E-13 7.7E-18 141.4 9.0 150 12-171 21-194 (317)
45 1a7t_A Metallo-beta-lactamase; 99.4 5.2E-14 1.8E-18 139.7 3.9 131 11-170 35-167 (232)
46 3aj3_A MLR6805 protein, 4-pyri 99.4 7.7E-14 2.6E-18 141.8 4.8 150 10-172 32-212 (274)
47 3q6v_A Beta-lactamase; metallo 99.4 6.5E-14 2.2E-18 138.5 4.1 156 4-171 17-172 (233)
48 4efz_A Metallo-beta-lactamase 99.4 2E-13 6.9E-18 140.9 7.7 149 10-172 14-179 (298)
49 2fhx_A SPM-1; metallo-beta-lac 99.4 1.6E-13 5.5E-18 137.1 6.3 154 5-170 22-187 (246)
50 1vjn_A Zn-dependent hydrolase 99.4 2.1E-12 7.1E-17 127.4 13.4 123 11-194 18-147 (220)
51 4ad9_A Lactb2, beta-lactamase- 99.4 1.3E-13 4.5E-18 141.4 4.3 135 11-170 30-168 (289)
52 2qed_A Hydroxyacylglutathione 99.4 2.2E-13 7.7E-18 137.7 5.4 126 2-170 10-137 (258)
53 2p18_A Glyoxalase II; metallop 99.4 7E-13 2.4E-17 137.7 9.0 128 13-171 40-184 (311)
54 2ohh_A Type A flavoprotein FPR 99.4 4.6E-13 1.6E-17 143.8 7.6 133 12-169 34-172 (404)
55 3hnn_A Putative diflavin flavo 99.4 8.8E-14 3E-18 140.9 1.6 131 11-168 41-175 (262)
56 2vw8_A PA1000, PQSE; quinolone 99.4 7.1E-13 2.4E-17 136.9 8.2 152 11-169 22-182 (303)
57 1qh5_A Glyoxalase II, protein 99.3 6.2E-13 2.1E-17 134.6 5.8 121 12-170 11-137 (260)
58 3tp9_A Beta-lactamase and rhod 99.3 5.2E-13 1.8E-17 146.8 4.9 132 11-171 14-153 (474)
59 1xm8_A Glyoxalase II; structur 99.3 5.2E-13 1.8E-17 134.7 4.4 120 13-170 12-134 (254)
60 1ycg_A Nitric oxide reductase; 99.3 6E-13 2.1E-17 142.6 4.9 132 11-169 34-168 (398)
61 1jjt_A IMP-1 metallo beta-lact 99.3 3E-13 1E-17 133.9 2.1 130 10-170 30-161 (228)
62 2y8b_A Metallo-B-lactamase; hy 99.3 6.8E-13 2.3E-17 134.6 3.9 137 10-171 65-201 (265)
63 2gcu_A Putative hydroxyacylglu 99.3 7.9E-13 2.7E-17 132.6 4.2 126 10-171 12-146 (245)
64 2q9u_A A-type flavoprotein; fl 99.2 2.4E-12 8.2E-17 138.9 3.1 131 12-169 40-173 (414)
65 4eyb_A Beta-lactamase NDM-1; m 99.2 4.3E-13 1.5E-17 136.5 -2.7 143 7-170 69-211 (270)
66 3r2u_A Metallo-beta-lactamase 99.2 5.5E-12 1.9E-16 138.3 3.9 132 10-171 34-173 (466)
67 2p97_A Hypothetical protein; p 99.1 8.8E-12 3E-16 120.9 2.1 122 9-171 20-141 (201)
68 2cfu_A SDSA1; SDS-hydrolase, l 99.0 1.5E-10 5.2E-15 131.8 4.8 155 12-170 122-302 (658)
69 2yhe_A SEC-alkyl sulfatase; hy 98.4 2.3E-10 8E-15 129.8 0.0 155 13-170 133-313 (668)
70 2p4z_A Metal-dependent hydrola 98.5 5.8E-08 2E-12 99.2 5.2 73 12-88 32-104 (284)
71 3h3e_A Uncharacterized protein 97.8 3.2E-06 1.1E-10 85.2 1.2 61 13-87 32-92 (267)
72 3rpc_A Possible metal-dependen 82.1 1.6 5.6E-05 42.9 5.8 58 382-444 202-264 (264)
73 2wyl_A L-ascorbate-6-phosphate 79.1 2.7 9.3E-05 43.4 6.5 67 382-449 257-328 (360)
74 3bv6_A Metal-dependent hydrola 78.2 3.6 0.00012 42.9 7.1 64 382-446 282-350 (379)
75 1zkp_A Hypothetical protein BA 71.8 5 0.00017 39.2 5.9 56 382-443 211-267 (268)
76 2e7y_A TRNAse Z; tRNA maturati 71.3 7.7 0.00026 37.8 7.2 58 382-444 220-280 (280)
77 1y44_A Ribonuclease Z; zinc-de 60.9 13 0.00045 37.1 6.7 57 382-445 245-305 (320)
78 2cbn_A Ribonuclease Z; phospho 59.5 14 0.00046 36.7 6.4 56 382-444 247-306 (306)
79 3zwf_A Zinc phosphodiesterase 50.9 16 0.00053 37.8 5.3 62 382-448 287-361 (368)
80 3md7_A Beta-lactamase-like; ss 48.3 26 0.0009 34.5 6.4 56 381-445 237-292 (293)
81 3evf_A RNA-directed RNA polyme 37.4 90 0.0031 30.8 8.0 64 182-246 137-204 (277)
82 1ej0_A FTSJ; methyltransferase 37.1 39 0.0013 29.4 5.1 62 184-245 87-153 (180)
83 3gcz_A Polyprotein; flavivirus 36.2 78 0.0027 31.4 7.3 67 181-247 152-222 (282)
84 3eld_A Methyltransferase; flav 33.2 2.2E+02 0.0075 28.4 10.1 87 182-268 144-239 (300)
85 3dou_A Ribosomal RNA large sub 31.8 17 0.00057 33.6 1.6 60 185-244 91-155 (191)
86 1vjn_A Zn-dependent hydrolase 26.7 45 0.0015 31.5 3.7 29 382-410 149-177 (220)
87 2p4z_A Metal-dependent hydrola 26.5 60 0.002 31.8 4.8 50 386-444 235-284 (284)
88 3g1p_A Protein PHNP; C-P lyase 25.7 41 0.0014 32.3 3.3 55 382-445 198-252 (258)
89 2px2_A Genome polyprotein [con 25.6 1.9E+02 0.0064 28.3 7.8 81 183-265 137-228 (269)
90 2gak_A Beta-1,6-N-acetylglucos 25.3 69 0.0024 33.3 5.1 40 379-418 88-128 (391)
91 3kl7_A Putative metal-dependen 24.4 38 0.0013 32.3 2.7 39 381-419 184-222 (235)
92 2wa2_A Non-structural protein 23.3 3.8E+02 0.013 25.9 10.0 58 183-242 146-206 (276)
93 2nyu_A Putative ribosomal RNA 23.2 75 0.0026 28.5 4.5 62 184-245 96-162 (196)
94 2oxt_A Nucleoside-2'-O-methylt 22.7 2.1E+02 0.0073 27.6 7.9 58 183-242 138-198 (265)
95 2hwk_A Helicase NSP2; rossman 22.6 36 0.0012 33.8 2.1 62 184-245 205-273 (320)
96 3h3e_A Uncharacterized protein 21.5 1.8E+02 0.006 28.4 7.0 93 336-444 171-265 (267)
No 1
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=100.00 E-value=2.2e-79 Score=674.77 Aligned_cols=446 Identities=81% Similarity=1.311 Sum_probs=367.1
Q ss_pred cEecCCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeE
Q psy8348 2 KTLKGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRC 81 (622)
Q Consensus 2 v~~LG~g~evG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~I 81 (622)
|++||+++++|+||++|+.++.+||||||..++..+...+|++..+++.+||+|||||+|.||+||+|++..+.+++++|
T Consensus 14 i~~LG~~~~vg~s~~li~~~~~~iLID~G~~~~~~~~~~~~~l~~~~~~~Id~VllTH~H~DH~ggl~~l~~~~~~~~~i 93 (459)
T 2i7t_A 14 IRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRT 93 (459)
T ss_dssp EEEEESSSSSSSCEEEEEETTEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHSSCCSEE
T ss_pred EEEEecCCCCCCCEEEEEECCeEEEEeCCCCcCcccccccCcccccCcccCcEEEECCCChhhhhhhHHHHHhcCCCCCE
Confidence 78999999999999999999999999999876654445566666678889999999999999999999998888889999
Q ss_pred EechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeCCCCCCcEEEEEEECCEE
Q psy8348 82 FMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVK 161 (622)
Q Consensus 82 y~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~aGH~~Gs~~~~I~~~~~~ 161 (622)
|++++|.++++.++.++.++........+|+..++.....++..+++++.++++|++++++++||++|+++|.++.++.+
T Consensus 94 y~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~GH~~Gs~~~~i~~~~~~ 173 (459)
T 2i7t_A 94 FMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK 173 (459)
T ss_dssp EEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEETTEEEEEEECCSSTTCEEEEEEETTEE
T ss_pred EechHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHhccEEeCCCCEEEECCEEEEEEeCCCccCcEEEEEEECCcE
Confidence 99999999999888887766555455677888888887788999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCccccccccCCCCCCCcEEEEcccCCCCCCchhhhHHHHHHHHHHHHHHcCCeEEEeecccchHHHHHHHH
Q psy8348 162 ILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGTHVHEQREEREGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLIL 241 (622)
Q Consensus 162 IlytGD~~~~~~~~l~~a~~~~~~~DvLI~EsTyg~~~~~~~~~~~~~~~~~i~~~l~~gg~vliP~falGR~qEll~iL 241 (622)
++||||+...++.++..+.++..++|+||+||||+.+.|+++.+++++|.+.+++++++||+|+||+|++||+|||+.+|
T Consensus 174 il~sGD~~~~~~~~~~~~~~~~~~~D~Li~Esty~~~~~~~~~~~~~~l~~~i~~~~~~~g~vlip~fa~gr~qell~~l 253 (459)
T 2i7t_A 174 LLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLIL 253 (459)
T ss_dssp EEECCSCCCC-----CCCCCCSSCCSEEEEECTTTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCSSSSHHHHHHHH
T ss_pred EEEeCCCCCCCCcccCCCCcCCCCCeEEEECCCCCCCCCCChHHHHHHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHH
Confidence 99999999988777665556667899999999999999999889999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCccEEEECchHHHHHHHHHHhHHhhhHHHHHHHhcCCCcccccccccccccccccCCCeEEEecCCCCC
Q psy8348 242 DEYWSLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQISINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQ 321 (622)
Q Consensus 242 ~~~~~~~~~l~~ipI~~~s~~a~~~~~~y~~~~~~~~~~i~~~~~~~npf~f~~i~~l~~~~~~~~~~p~Vvias~gml~ 321 (622)
+++|++++.++++|||++|++|.+++++|++|.+||++.+++.+...|||.|+++..+++.+.+...+||||+|+||||+
T Consensus 254 ~~~~~~~~~~~~~pi~~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~viia~~gm~~ 333 (459)
T 2i7t_A 254 DEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQ 333 (459)
T ss_dssp HHHHHHCGGGTTSCEEEC---------------------------------CCSEEECCCTTSSCCCSSEEEEESCTTCS
T ss_pred HHHHHhcCCCCCccEEEECHHHHHHHHHHHHHHHHHhHHHHHHhcccCCcCCCcceeeCCHHHhcCCCCeEEEEcCcccC
Confidence 99999887778899999999999999999999999999998887778999999988776655555679999999999999
Q ss_pred cchHHHHHHHHcCCCCCeEEEeccCCCCCcccccccCCceeeeccCeEeeceeeEEEEecccCCCHHHHHHHHHHhCCCe
Q psy8348 322 SGLSRELFEMWCTDAKNGVIIAGYCVEGTLAKTILSEPEEVIGMSGQRLPLKMSVDYISFSAHTDYQQTSEFVRELRPAH 401 (622)
Q Consensus 322 ~G~s~~~l~~~~~d~~n~vil~gy~~~gt~~~~l~~~~~~~~~~~g~~i~~~~~v~~i~fS~Had~~el~~~i~~l~P~~ 401 (622)
+|+++++|++|++|++|+|+|+||+++||+|++++++++.+..+.|+.++++|+|+.++||+|||+.||.+||+.++|++
T Consensus 334 ~g~~~~~l~~~~~~~~~~ii~~gy~~~gt~g~~l~~~~~~~~~~~g~~~~~~~~v~~~~~S~Had~~~l~~~i~~~~p~~ 413 (459)
T 2i7t_A 334 SGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH 413 (459)
T ss_dssp SHHHHHHHHHHTTCTTCEEEECSCCCTTSHHHHHTTCCSEEECTTSCEEECCSEEEECCCSCCCCHHHHHHHHHHHCCSE
T ss_pred CCHHHHHHHHHcCCCCCeEEEEecCCCCChHHHHhhCCceeeeeCCcEEEEEEEEEEeeecccCCHHHHHHHHHhcCCCe
Confidence 99999999999999999999999999999999999999887778899999999999999999999999999999999999
Q ss_pred EEEEcCChHHHHHHHHHHHHhhcCCCCCceEEeeCCCCcEEEEeec
Q psy8348 402 VVLVHGEQNEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDLYFK 447 (622)
Q Consensus 402 VilvHGe~~~~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l~~~ 447 (622)
|++||||+..+.+|++.|.++|+.+++.+.++++|+|||+++|.|+
T Consensus 414 v~~vHGe~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 459 (459)
T 2i7t_A 414 VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFR 459 (459)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHSSCTTCCCEEECCCTTCCEEEEEC
T ss_pred EEEeCCCHHHHHHHHHHHHHHhccccccCceEEeCCCCCEEEEEeC
Confidence 9999999999999999999999866544578999999999999985
No 2
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=100.00 E-value=7.8e-77 Score=648.29 Aligned_cols=423 Identities=27% Similarity=0.478 Sum_probs=376.0
Q ss_pred cEecCCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeE
Q psy8348 2 KTLKGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRC 81 (622)
Q Consensus 2 v~~LG~g~evG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~I 81 (622)
|++|||++++|+||++|+.++.+||||||+.++......++.+ .+++.+||+|||||+|.||+||+|++.+ .+++++|
T Consensus 3 i~~LG~~~~vg~s~~li~~~~~~iLID~G~~~~~~~~~~~~~~-~~~~~~Id~VllTH~H~DH~gglp~l~~-~~~~~~I 80 (431)
T 3iek_A 3 IVPFGAAREVTGSAHLLLAGGRRVLLDCGMFQGKEEARNHAPF-GFDPKEVDAVLLTHAHLDHVGRLPKLFR-EGYRGPV 80 (431)
T ss_dssp EEECSCSSSSSCCCEEEEETTEEEEECCCCCCGGGGGGGGSCC-SSCGGGCCEEECSCCCHHHHTTHHHHHH-TTCCSCE
T ss_pred EEEeCCCCCCCCcEEEEEECCeEEEEeCCCCcchhhccchhhc-CCCcccCCEEEECCCChHHhccHHHHHH-cCCCCeE
Confidence 7899999999999999999999999999985543111111111 2467889999999999999999999876 4678999
Q ss_pred EechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeCCCCCCcEEEEEEECCEE
Q psy8348 82 FMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVK 161 (622)
Q Consensus 82 y~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~aGH~~Gs~~~~I~~~~~~ 161 (622)
|+|++|.++++.++.++.++... ++|+.+++..++.++..+++++.++++|++++++++||++||++|.++.++.+
T Consensus 81 y~t~~t~~l~~~~l~d~~~~~~~----~~y~~~~~~~~~~~~~~l~~~~~~~l~g~~v~~~~agH~~Gs~~~~i~~~~~~ 156 (431)
T 3iek_A 81 YATRATVLLMEIVLEDALKVMDE----PFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQAGHLPGSAFVVAQGEGRT 156 (431)
T ss_dssp EECHHHHHHHHHHHHHHHHHCSS----CSSCHHHHHHHHHTEEECCTTCCEEETTEEEEEEECCSSTTCEEEEEEETTEE
T ss_pred EEcHHHHHHHHHHHHHHHhhccc----CCCCHHHHHHHHhccEEcCCCCeEEeCCEEEEEEeCCCCcCceEEEEEECCEE
Confidence 99999999999988888766532 67999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCccccccccCCCCCCCcEEEEcccCCCCCCchhhhHHHHHHHHHHHHHHcCCeEEEeecccchHHHHHHHH
Q psy8348 162 ILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGTHVHEQREEREGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLIL 241 (622)
Q Consensus 162 IlytGD~~~~~~~~l~~a~~~~~~~DvLI~EsTyg~~~~~~~~~~~~~~~~~i~~~l~~gg~vliP~falGR~qEll~iL 241 (622)
++||||+....+..+.... ...++|+||+||||+++.|+++.+++++|.+.+.+++++||+++||+|++||+|||+.+|
T Consensus 157 ilfsGD~~~~~~~~l~~~~-~~~~~D~LI~EsTy~~~~h~~~~~~~~~l~~~i~~~~~~gg~vlIp~fa~gR~qell~~l 235 (431)
T 3iek_A 157 LVYSGDLGNREKDVLPDPS-LPPLADLVLAEGTYGDRPHRPYRETVREFLEILEKTLSQGGKVLIPTFAVERAQEILYVL 235 (431)
T ss_dssp EEECCCCCCTTSSSSCCCC-BCCCCSEEEEECTTTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCTTTHHHHHHHHH
T ss_pred EEEeCCCCCCCCcccCCcc-ccCCccEEEEEcccCCcCCCChHHHHHHHHHHHHHHHHcCCeEEEEeccchHHHHHHHHH
Confidence 9999999987776653332 235899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCccEEEECchHHHHHHHHHHhHHhhhHHHHHHHh-cCCCcccccccccccccc---c-ccCCCeEEEec
Q psy8348 242 DEYWSLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQIS-INNPFVFKHISNLKGIDH---F-EDIGPCVVMAS 316 (622)
Q Consensus 242 ~~~~~~~~~l~~ipI~~~s~~a~~~~~~y~~~~~~~~~~i~~~~~-~~npf~f~~i~~l~~~~~---~-~~~~p~Vvias 316 (622)
+++|++ ++++|||++|++|.+++++|+.|.+||++.+++.+. ..|||.|++++.+++.+. + ...+||||||+
T Consensus 236 ~~~~~~---~~~~pi~~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~p~viia~ 312 (431)
T 3iek_A 236 YTHGHR---LPRAPIYLDSPMAGRVLSLYPRLVRYFSEEVQAHFLQGKNPFRPAGLEVVEHTEASKALNRAPGPMVVLAG 312 (431)
T ss_dssp HHHGGG---SCCCCEEEECHHHHHHHHHGGGGGGGSCHHHHHHHHTTSCTTCCTTEEECCSHHHHHHHHHSCSSEEEEES
T ss_pred HHHHHh---ccCCCEEEeChHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCCCCCCeEEeCCHHHHHHHhcCCCCeEEEec
Confidence 999977 568999999999999999999999999999988775 479999999887765432 2 24799999999
Q ss_pred CCCCCcchHHHHHHHHcCCCCCeEEEeccCCCCCcccccccCCceeeeccCeEeeceeeEEEE-ecccCCCHHHHHHHHH
Q psy8348 317 PGMMQSGLSRELFEMWCTDAKNGVIIAGYCVEGTLAKTILSEPEEVIGMSGQRLPLKMSVDYI-SFSAHTDYQQTSEFVR 395 (622)
Q Consensus 317 ~gml~~G~s~~~l~~~~~d~~n~vil~gy~~~gt~~~~l~~~~~~~~~~~g~~i~~~~~v~~i-~fS~Had~~el~~~i~ 395 (622)
||||++|+++++|++|++|++|+|+|+|||++||+|++|+++++++ .+.|+.++++|+|+++ +||||||+.||.+|++
T Consensus 313 ~gm~~~G~~~~~l~~~~~~~~n~ii~~gyq~~gt~g~~l~~~~~~v-~~~g~~~~v~a~v~~~~~~saHad~~~l~~~~~ 391 (431)
T 3iek_A 313 SGMLAGGRILHHLKHGLSDPRNALVFVGYQPQGGLGAEIIARPPAV-RILGEEVPLRASVHTLGGFSGHAGQDELLDWLQ 391 (431)
T ss_dssp CTTSSSSHHHHHHHHHTTCTTCEEEECSCCCTTSHHHHHHTCCSEE-EETTEEEECCSEEEECGGGCSSCCHHHHHHHHT
T ss_pred CCCCCCChHHHHHHHhcCCCCCeEEEECCCCCCChHHHhhcCCcEE-EECCEEEEEEEEEEEECCccccCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987765 5789999999999999 6999999999999999
Q ss_pred HhCCCeEEEEcCChHHHHHHHHHHHHhhcCCCCCceEEeeCCCCcEEEE
Q psy8348 396 ELRPAHVVLVHGEQNEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDL 444 (622)
Q Consensus 396 ~l~P~~VilvHGe~~~~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l 444 (622)
.++ +|++||||++.+.+|+++|.+++. ++++|++||++++
T Consensus 392 ~~~--~v~lvHge~~~~~~l~~~l~~~~~-------~~~~p~~~~~~~~ 431 (431)
T 3iek_A 392 GEP--RVVLVHGEEEKLLALGKLLALRGQ-------EVSLARFGEGVPV 431 (431)
T ss_dssp TCS--EEEEESSCHHHHHHHHHHHHHTTC-------EEEECCTTCCEEC
T ss_pred hCC--eEEEECCCHHHHHHHHHHHHHhCC-------cEEECCCCCEEeC
Confidence 775 899999999999999999988752 5899999999874
No 3
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=100.00 E-value=8.5e-66 Score=586.01 Aligned_cols=433 Identities=28% Similarity=0.538 Sum_probs=356.5
Q ss_pred cEecCCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCC--C-CCCCccEEEcCCCchhhhcchHHHHHhcCCC
Q psy8348 2 KTLKGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDL--V-ESDQIDLLLISHFHLDHCGALPWFLLKTGFK 78 (622)
Q Consensus 2 v~~LG~g~evG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~--~-~~~~Id~IlITH~H~DHiggLp~l~~~~~~~ 78 (622)
|++||+++++|+||++|+.++.+||||||..++. +...+|.+.. . +..+||+|||||+|.||+||+|+++.. +++
T Consensus 186 I~~LG~~~evg~s~~LI~~~~~~ILID~G~~~~~-~~~~l~~l~~~~~~~~~~Id~VllTH~H~DHiGgl~~L~~~-~~~ 263 (640)
T 2xr1_A 186 VTALGGCKEVGRSCFLLSTPESRILIDCGVNVGS-DENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLFKY-GYE 263 (640)
T ss_dssp EEEEECSSSSBCCEEEEECSSCEEEECCCCBCSS-CSSCCCCTTSTTTCSGGGCCEEECCSSCHHHHTTHHHHHHT-TCC
T ss_pred EEEEecCCCCCCcEEEEEECCeEEEEeCCCCccc-cccccccccccccCCcccCcEEEECCCChhhhccHHHHHhc-CCC
Confidence 7899999999999999999999999999986543 2334565542 4 677899999999999999999998764 478
Q ss_pred CeEEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEe-CCEEEEEEeCCCCCCcEEEEEEE
Q psy8348 79 GRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDV-NGIKFSAYNAGHVLGAAMFLIEI 157 (622)
Q Consensus 79 ~~Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i-~gi~v~~~~aGH~~Gs~~~~I~~ 157 (622)
++||++++|.++++..+.++.+..........|+..++.....++..+.+++.+++ +|++++++++||++||++|.++.
T Consensus 264 ~~Iy~t~~t~~ll~~~l~d~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~g~~i~l~gg~~v~~~~~GH~~Gs~~~~i~~ 343 (640)
T 2xr1_A 264 GPVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAGHILGSAISHFHI 343 (640)
T ss_dssp SCEEECHHHHHHHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSSTTCEEEEEEE
T ss_pred CeEEECHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHHhceEEeCCCCEEEecCCEEEEEEcCCCCcCcEEEEEEE
Confidence 99999999999988888877665432233456887788777778889999999999 99999999999999999999999
Q ss_pred CCE--EEEEEcCCCCCccccccccCCCCCCCcEEEEcccCCCCC--CchhhhHHHHHHHHHHHHHHcCCeEEEeecccch
Q psy8348 158 AGV--KILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGTHV--HEQREEREGRFTSLIHDIVNRGGRCLIPVFALGR 233 (622)
Q Consensus 158 ~~~--~IlytGD~~~~~~~~l~~a~~~~~~~DvLI~EsTyg~~~--~~~~~~~~~~~~~~i~~~l~~gg~vliP~falGR 233 (622)
++. +++||||+....+.++..+..+..++|+||+||||++.. |+++.+...+|.+.+.++++++|+++||+|++||
T Consensus 344 ~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLi~EsT~g~~~~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp~favGR 423 (640)
T 2xr1_A 344 GDGLHNVVFTGDYKYEKTRLFDPAVNKFPRVETVISEATYGNANAFQPALKDAEKHLQMVVKNTIERGGIAVIPAFAVGR 423 (640)
T ss_dssp TTTTEEEEECCSCCSSCCSSCCCCCCBCSCCSEEEEECTTCSTTCCCCCHHHHHHHHHHHC--------CEEEECCTTTH
T ss_pred CCceEEEEEECCCCCCCccccccccccCCCCcEEEECCCCCCCccCCCCHHHHHHHHHHHHHHHHhcCCeEEEEecccch
Confidence 888 999999999877665554333456899999999999887 8888888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCccEEEECchHHHHHHHHHHhHHhhhHHHHHHH--hcCCCcccccccccccc---ccc-cc
Q psy8348 234 AQELLLILDEYWSLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQI--SINNPFVFKHISNLKGI---DHF-ED 307 (622)
Q Consensus 234 ~qEll~iL~~~~~~~~~l~~ipI~~~s~~a~~~~~~y~~~~~~~~~~i~~~~--~~~npf~f~~i~~l~~~---~~~-~~ 307 (622)
+||++.+|+++|.+. .++++|||++| ++.+++.+|..+.+||++.+++.+ ...|||.++++..+++. ..+ ..
T Consensus 424 ~qell~~l~~~~~~~-~~~~~~V~~dg-~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 501 (640)
T 2xr1_A 424 SQEVMIVLEESIRKG-LIPEVPVYLDG-MIWEATAIHATHPEYLNNDLRKLIFQKGQNPFLSECFKPVDSHEARQKIIQN 501 (640)
T ss_dssp HHHHHHHHHHHHHHT-SSCCCCEEEES-SHHHHHHHHHHCGGGSCHHHHHHC------CTTCTTEEEEC-CHHHHHC---
T ss_pred HHHHHHHHHHHHHhC-CCCCCcEEEEh-HHHHHHHHHHHhHhhhcHHHHHHHHhcccCcccCCceEEeCCHHHHHHHhcC
Confidence 999999999998763 56789999998 888999999999999999887654 23689987776665532 222 33
Q ss_pred CCCeEEEecCCCCCcchHHHHHHHHcCCCCCeEEEeccCCCCCcccccccCCceeeec--cCe--EeeceeeEEEEe-cc
Q psy8348 308 IGPCVVMASPGMMQSGLSRELFEMWCTDAKNGVIIAGYCVEGTLAKTILSEPEEVIGM--SGQ--RLPLKMSVDYIS-FS 382 (622)
Q Consensus 308 ~~p~Vvias~gml~~G~s~~~l~~~~~d~~n~vil~gy~~~gt~~~~l~~~~~~~~~~--~g~--~i~~~~~v~~i~-fS 382 (622)
.+||||+||+||+++|+++++|++|+++++|+|+|+||+++||+|++|.++..++... .|. .++++|+|..++ ||
T Consensus 502 ~~~~vIiat~gm~~gg~~~~~l~~~~~~~~~~vi~sg~~~~gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~g~S 581 (640)
T 2xr1_A 502 PQPCVILATSGMMNGGPVMEYFKAFAEDPRNTLVFVGYQADGTIGRRIQKGWKEIPMTGKNGSTEMLKMNMEVQVVDGFS 581 (640)
T ss_dssp -CCCEEEESCTTSSSSHHHHHHHHHSSCTTCEEEECSCCCTTCHHHHHHTTCCC-----------CCCCCSEEEECCCCS
T ss_pred CCCeEEEeCCCccCCChHHHHHHHhhCCCCCEEEEecCCCCCCHHHHHhhccceeeeeccCCCceEEeeeEEEEEEcccc
Confidence 7899999999999999999999999999999999999999999999988776554322 376 788999999999 99
Q ss_pred cCCCHHHHHHHHHHhC--CCeEEEEcCChHHHHHHHHHHHHhhcCCCCCceEEeeCCCCcEEEE
Q psy8348 383 AHTDYQQTSEFVRELR--PAHVVLVHGEQNEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDL 444 (622)
Q Consensus 383 ~Had~~el~~~i~~l~--P~~VilvHGe~~~~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l 444 (622)
+|||++||.+|++.++ |++|||||||++.+..|++.+.++++ +++++|+||++++|
T Consensus 582 gHad~~eL~~~i~~~~~~P~~vi~vHGe~~~~~~~a~~~~~~~g------~~~~~p~~g~~~~l 639 (640)
T 2xr1_A 582 GHSDRRQLMEYVKRMQPRPERVFTEHGDEKACVDLASSVYKKLK------IETRALTNLETVRL 639 (640)
T ss_dssp CSCCHHHHHHHHHTCBSCCSEEEEESSCHHHHHHHHHHHHHHHC------CEEEECCTTCEEEC
T ss_pred ccCCHHHHHHHHHHhccCCCEEEEECCCHHHHHHHHHHHHHHcC------CeEEeCCCCCEEEe
Confidence 9999999999999999 99999999999999999998877775 47999999999986
No 4
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=100.00 E-value=8.7e-66 Score=587.41 Aligned_cols=433 Identities=30% Similarity=0.554 Sum_probs=369.2
Q ss_pred cEecCCCCCCCCcEEEEEECCeEEEEeCCCCCCCC--CCCCCCCCCC--C--CC--CCccEEEcCCCchhhhcchHHHHH
Q psy8348 2 KTLKGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLS--GMDALPFVDL--V--ES--DQIDLLLISHFHLDHCGALPWFLL 73 (622)
Q Consensus 2 v~~LG~g~evG~sc~lI~~~~~~ILiD~G~~~~~~--~~~~lp~~~~--~--~~--~~Id~IlITH~H~DHiggLp~l~~ 73 (622)
|++||+++++|+||++|+.++.+||||||..++.. +...+|.+.. + +. .+||+|||||+|.||+||+|+++.
T Consensus 191 i~~LG~~~~vg~s~~LI~~~~~~ILID~G~~~~~~~~g~~~l~~l~~~~~g~~~~~~~Id~VllTH~H~DHiGglp~L~~ 270 (651)
T 3af5_A 191 ITGLGGFREVGRSALLVQTDESFVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVLREGLLDAIIITHAHLDHCGMLPYLFR 270 (651)
T ss_dssp EEEEECSSSSSCCEEEEEESSCEEEECCCCCGGGTTCHHHHSCCTTCHHHHHHHHTTCCCEEECSCSSHHHHTTHHHHHH
T ss_pred EEEEecCCCCCCcEEEEEECCcEEEEeCCCChhccccchhhcccccchhhccCcccCCCCEEEECCCChHhhcCHHHHHh
Confidence 78999999999999999999999999999864421 1223454432 2 45 789999999999999999999876
Q ss_pred hcC-CCCeEEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEe-CCEEEEEEeCCCCCCcE
Q psy8348 74 KTG-FKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDV-NGIKFSAYNAGHVLGAA 151 (622)
Q Consensus 74 ~~~-~~~~Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i-~gi~v~~~~aGH~~Gs~ 151 (622)
. + ++++||++.+|..+++..+.++.+..........|+..++.....++..+++++.+++ +|++++++++||++||+
T Consensus 271 ~-~~~~~pIy~t~~t~~ll~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~Gs~ 349 (651)
T 3af5_A 271 Y-NLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGHILGSA 349 (651)
T ss_dssp T-TCCCSCEEECHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSSTTCE
T ss_pred c-CCCCceEEEcHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHhhhcEEEeCCCCEEEecCCEEEEEecCCCCcCcE
Confidence 3 4 6799999999999988888877665443333456887777777777889999999999 99999999999999999
Q ss_pred EEEEEECCE--EEEEEcCCCCCccccccccCCCCCCCcEEEEcccCCCCC--CchhhhHHHHHHHHHHHHHHcCCeEEEe
Q psy8348 152 MFLIEIAGV--KILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGTHV--HEQREEREGRFTSLIHDIVNRGGRCLIP 227 (622)
Q Consensus 152 ~~~I~~~~~--~IlytGD~~~~~~~~l~~a~~~~~~~DvLI~EsTyg~~~--~~~~~~~~~~~~~~i~~~l~~gg~vliP 227 (622)
+|.++.++. +++||||+....+.++..+.....++|+||+||||+++. |+++.+.++.|.+.+.++++++|+++||
T Consensus 350 ~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLI~EsT~~~~~~~h~s~~~~~~~l~~~i~~~l~~~g~vlIp 429 (651)
T 3af5_A 350 IVHLHIGNGLHNIAITGDFKFIPTRLLEPANAKFPRLETLVMESTYGGANDIQMPREEAEKRLIEVIHNTIKRGGKVLIP 429 (651)
T ss_dssp EEEEEETTTTTCEEECCSCCCSCCSSCCCCCCBCSSCSEEEEECTTCSTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEECCCceEEEEeCCCCCCcccccccccccCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 999999888 999999999887766544333446899999999999887 8888888899999999999999999999
Q ss_pred ecccchHHHHHHHHHHHHHhCCCCCCccEEEECchHHHHHHHHHHhHHhhhHHHHHHH--hcCCCcccccccccccc---
Q psy8348 228 VFALGRAQELLLILDEYWSLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQI--SINNPFVFKHISNLKGI--- 302 (622)
Q Consensus 228 ~falGR~qEll~iL~~~~~~~~~l~~ipI~~~s~~a~~~~~~y~~~~~~~~~~i~~~~--~~~npf~f~~i~~l~~~--- 302 (622)
+|++||+||++.+|+++|.++ .++ +|||++| ++.+++.+|+.+.+||++.+++.+ ...|||.++++..+++.
T Consensus 430 ~favgR~qell~~l~~~~~~~-~l~-~~I~~dg-~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~v~~~~~~ 506 (651)
T 3af5_A 430 AMAVGRAQEVMMVLEEYARIG-GIE-VPIYLDG-MIWEATAIHTAYPEYLSRRLREQIFKEGYNPFLSEIFHPVANSRER 506 (651)
T ss_dssp CCTTTHHHHHHHHHHHHHTTT-CCC-SCEEEES-SHHHHHHHHHTCGGGSCHHHHHHTTTSSCCSTTCTTEEECCSHHHH
T ss_pred ccCccHHHHHHHHHHHhhhhc-CCC-CcEEEec-hHHHHHHHHHHhHHhcCHHHHHHHHhccCCCccCCceEEcCCHHHH
Confidence 999999999999999998754 455 8999998 888999999999999999887765 23689987776665532
Q ss_pred ccc-ccCCCeEEEecCCCCCcchHHHHHHHHcCCCCCeEEEeccCCCCCcccccccCCceeee--ccCe--EeeceeeEE
Q psy8348 303 DHF-EDIGPCVVMASPGMMQSGLSRELFEMWCTDAKNGVIIAGYCVEGTLAKTILSEPEEVIG--MSGQ--RLPLKMSVD 377 (622)
Q Consensus 303 ~~~-~~~~p~Vvias~gml~~G~s~~~l~~~~~d~~n~vil~gy~~~gt~~~~l~~~~~~~~~--~~g~--~i~~~~~v~ 377 (622)
..+ ...+||||+|++||+++|+++++|++|+++++|+|+|+||+++||+|++|.++..++.. ..|. .++++|+|.
T Consensus 507 ~~~~~~~~~~vIia~~gm~~gg~~~~~l~~~~~~~~~~vi~sg~~~~gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~ 586 (651)
T 3af5_A 507 QDIIDSNEPAIIIASSGMLVGGPSVEYFKQLAPDPKNSIIFVSYQAEGTLGRQVQSGIREIPMVGEEGRTEVIKVNMEVH 586 (651)
T ss_dssp HHHHHSCSCEEEEESCTTSSSSHHHHHHHHHTTCTTCEEEECSCCCTTCHHHHHHHTCSEEEEECGGGCEEEEECCSEEE
T ss_pred HHHhcCCCCEEEEECCCCCCCCHHHHHHHHHhCCCCCEEEEeCCCCCCcHHHHHHhccceeeehhcCCCceEEEeEEEEE
Confidence 222 34789999999999999999999999999999999999999999999998877665432 2477 788999999
Q ss_pred EEe-cccCCCHHHHHHHHHHhC--CCeEEEEcCChHHHHHHHHHHHHhhcCCCCCceEEeeCCCCcEEEE
Q psy8348 378 YIS-FSAHTDYQQTSEFVRELR--PAHVVLVHGEQNEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDL 444 (622)
Q Consensus 378 ~i~-fS~Had~~el~~~i~~l~--P~~VilvHGe~~~~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l 444 (622)
.++ ||+|||++||.+|++.++ |++|||||||++.+..|++.+.++++ +++++|+||++++|
T Consensus 587 ~i~g~SgHad~~eL~~~i~~~~~~P~~vi~vHGe~~~~~~la~~~~~~~g------~~~~~p~~g~~~~l 650 (651)
T 3af5_A 587 TIDGFSGHADRRELMNYVAKVRPRPERIITVHGEPQKCLDLATSIHRKFG------ISTRAPNNLDTIRL 650 (651)
T ss_dssp ECGGGCSSCCHHHHHHHHHHCBSCCSEEEEESSCHHHHHHHHHHHHHHHC------CEEECCCTTCEEEC
T ss_pred EcCcccCcCCHHHHHHHHHHhhcCCCEEEEEcCCHHHHHHHHHHHHHhcC------CeEEECCCCCEEEe
Confidence 999 999999999999999999 99999999999999999998877775 46999999999986
No 5
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=100.00 E-value=1.8e-65 Score=583.65 Aligned_cols=434 Identities=30% Similarity=0.566 Sum_probs=370.2
Q ss_pred cEecCCCCCCCCcEEEEEECCeEEEEeCCCCCCCC-CCCCCCCCC--CCCCCCccEEEcCCCchhhhcchHHHHHhcCCC
Q psy8348 2 KTLKGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLS-GMDALPFVD--LVESDQIDLLLISHFHLDHCGALPWFLLKTGFK 78 (622)
Q Consensus 2 v~~LG~g~evG~sc~lI~~~~~~ILiD~G~~~~~~-~~~~lp~~~--~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~ 78 (622)
|++||+++++|+||++|+.++.+||||||..++.. +...+|.++ ..+..+||+|||||+|.||+||+|+++.. +++
T Consensus 182 i~~LG~~~evg~s~~lI~~~~~~ILID~G~~~~~~~~~~~~~~l~~l~~~~~~Id~VlLTH~H~DHiGglp~L~~~-~~~ 260 (636)
T 2ycb_A 182 LTAMGGFREVGRSCLYLQTPNSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLYHY-GYD 260 (636)
T ss_dssp EEEEESSSSSSCCEEEEECSSCEEEEEECCCCSSCCHHHHSCCTTSTTCCTTTCCEEECSSSSHHHHTTHHHHHHT-TCC
T ss_pred EEEEecCCCCCCCEEEEEECCeEEEEeCCCCcccccchhhccccccccCCcccCcEEEECCCChHHhcCHHHHHhc-CCC
Confidence 78999999999999999999999999999865421 012345444 24678999999999999999999998764 578
Q ss_pred CeEEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEe-CCEEEEEEeCCCCCCcEEEEEEE
Q psy8348 79 GRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDV-NGIKFSAYNAGHVLGAAMFLIEI 157 (622)
Q Consensus 79 ~~Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i-~gi~v~~~~aGH~~Gs~~~~I~~ 157 (622)
++||++++|.++++..+.++.+..........|+..++.....++..+++++.+++ +|++++++++||++|+++|.++.
T Consensus 261 ~~Iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~Gs~~~~i~~ 340 (636)
T 2ycb_A 261 GPVYCTAPTRDLMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNAGHILGSAMAHLHI 340 (636)
T ss_dssp SCEEECHHHHHHHHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECCSSTTCEEEEEEE
T ss_pred CeEEEcchHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHhceEEeCCCCEEEecCCeEEEEeCCCCCCCcEEEEEEE
Confidence 99999999999988888777655432233456888788777778899999999999 99999999999999999999999
Q ss_pred CCE--EEEEEcCCCCCccccccccCCCCCCCcEEEEcccCCCCC--CchhhhHHHHHHHHHHHHHHcCCeEEEeecccch
Q psy8348 158 AGV--KILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGTHV--HEQREEREGRFTSLIHDIVNRGGRCLIPVFALGR 233 (622)
Q Consensus 158 ~~~--~IlytGD~~~~~~~~l~~a~~~~~~~DvLI~EsTyg~~~--~~~~~~~~~~~~~~i~~~l~~gg~vliP~falGR 233 (622)
+++ +++||||+....+.++..+.....++|+||+||||+... |+++.+.+++|.+.+.++++++|+++||+|++||
T Consensus 341 ~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~D~LI~EsT~~~~~~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp~fa~GR 420 (636)
T 2ycb_A 341 GDGQHNMVYTGDFKYEQSRLLEAAANRFPRIETLVMESTYGGHEDVQPSRNRAEKELVKTIYSTLRRGGKILIPVFAVGR 420 (636)
T ss_dssp TTTTTCEEECCSCCSSCCSSSCCCCCCCSCCSEEEEECTTCSGGGCCCCHHHHHHHHHHHHHHHHHHTCCEEEECCTTTH
T ss_pred CCCeEEEEEECCCCCCcccccCCcccCCCCCeEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEECCCcH
Confidence 888 999999999887766554433456899999999999887 8888888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCccEEEECchHHHHHHHHHHhHHhhhHHHHHHH--hcCCCcccccccccccc---cccccC
Q psy8348 234 AQELLLILDEYWSLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQI--SINNPFVFKHISNLKGI---DHFEDI 308 (622)
Q Consensus 234 ~qEll~iL~~~~~~~~~l~~ipI~~~s~~a~~~~~~y~~~~~~~~~~i~~~~--~~~npf~f~~i~~l~~~---~~~~~~ 308 (622)
+||++.+|+++|.+ +.++++|||++| ++.+++.+|..+.+||++.+++.+ ...|||.++++..+++. ..+...
T Consensus 421 ~qell~~l~~~~~~-~~~~~~~V~~dg-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~ 498 (636)
T 2ycb_A 421 AQELMIVLEEYIRT-GIIDEVPVYIDG-MIWEANAIHTARPEYLSKDLRDQIFHMGHNPFISDIFHKVNGMDERREIVEG 498 (636)
T ss_dssp HHHHHHHHHHHHHT-TSSCCCCEEEEH-HHHHHHHHHHHSGGGSCHHHHHHHHTTCCCGGGCTTEEEECCHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHh-CCCCCCeEEEeh-HHHHHHHHHHHhHHhhCHHHHHHHHhccCCcccCCceEEeCCHHHHHHhccC
Confidence 99999999999875 456789999997 888999999999999999887654 23689977766655422 223336
Q ss_pred CCeEEEecCCCCCcchHHHHHHHHcCCCCCeEEEeccCCCCCcccccccCCceeeec--cCe--EeeceeeEEEEe-ccc
Q psy8348 309 GPCVVMASPGMMQSGLSRELFEMWCTDAKNGVIIAGYCVEGTLAKTILSEPEEVIGM--SGQ--RLPLKMSVDYIS-FSA 383 (622)
Q Consensus 309 ~p~Vvias~gml~~G~s~~~l~~~~~d~~n~vil~gy~~~gt~~~~l~~~~~~~~~~--~g~--~i~~~~~v~~i~-fS~ 383 (622)
+||||+|++||+++|+++++|++|+++++|+|+|+||+++||+|+++.++..++... .|. .++++|++..++ ||+
T Consensus 499 ~~~vIiat~gm~~gg~~~~~l~~~~~~~~~~vi~sg~~~~Gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~~~Sg 578 (636)
T 2ycb_A 499 EPSIILSTSGMLTGGNSLEYFKWLCEDPDNSLVFVGYQAEGSLGRRIQKGWKEIPLKDEDDKMRVYNVRMNIKTIEGFSG 578 (636)
T ss_dssp SSCEEEESCSSSSSHHHHHHHHHHTTCTTSEEEECSCCCSSSHHHHHHTTCCEEEEECSSSCEEEEECCSEEEECCSCCS
T ss_pred CCEEEEecCCccCCChHHHHHHHHhCCCCCEEEEecCCCCCCHHHHhhcCCceeeeeccCCceeEEEeEEEEEEECCcce
Confidence 899999999999999999999999999999999999999999999988776654332 477 888999999999 999
Q ss_pred CCCHHHHHHHHHHhC--CCeEEEEcCChHHHHHHHHHHHHhhcCCCCCceEEeeCCCCcEEEE
Q psy8348 384 HTDYQQTSEFVRELR--PAHVVLVHGEQNEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDL 444 (622)
Q Consensus 384 Had~~el~~~i~~l~--P~~VilvHGe~~~~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l 444 (622)
|||++||.+|++.++ |++|||||||++.+..|++.+.++++ +++++|+||++++|
T Consensus 579 Had~~eL~~~i~~~~~~Pk~vi~vHGe~~~~~~~a~~~~~~~g------~~~~~p~~g~~~~l 635 (636)
T 2ycb_A 579 HSDRRQLMEYVKRISPKPEKILLCHGDNYKTLDLASSIYRTYR------IETKTPLNLETVRI 635 (636)
T ss_dssp SCCHHHHHHHHHSCSSCCSEEEEESSCHHHHHHHHHHHHHHHC------CEEECCCTTCEEEC
T ss_pred eCCHHHHHHHHHHhccCCCEEEEECCCHHHHHHHHHHHHHHcC------CcEEeCCCCCEEEe
Confidence 999999999999999 99999999999999999998877775 46999999999986
No 6
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=100.00 E-value=2.1e-53 Score=487.20 Aligned_cols=350 Identities=17% Similarity=0.249 Sum_probs=281.3
Q ss_pred cEec-CCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCC-CCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcC---
Q psy8348 2 KTLK-GAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDA-LPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTG--- 76 (622)
Q Consensus 2 v~~L-G~g~evG~sc~lI~~~~~~ILiD~G~~~~~~~~~~-lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~--- 76 (622)
+++| ||++++|+|||+|+.++.+||||||+.++...+.. +.++....+ +||+|||||+|.||+||+|+++.+.+
T Consensus 3 ~t~L~gg~~ev~~n~~LIe~~~~~ILID~G~~~~~~~~~~~l~~L~~~~~-~IdaVlLTH~H~DHiGgLp~L~~~~~~g~ 81 (717)
T 2i7x_A 3 YKYNCCDDGSGTTVGSVVRFDNVTLLIDPGWNPSKVSYEQCIKYWEKVIP-EIDVIILSQPTIECLGAHSLLYYNFTSHF 81 (717)
T ss_dssp EEEEECCSSSSSCCCEEEEETTEEEEECCCCCTTTSCHHHHHHHHHTTGG-GCCEEECCCSSHHHHTTHHHHHHHSHHHH
T ss_pred EEEEeecCCCCCCCEEEEEECCeEEEEeCCCCcccchhhhHHHHHHhcCC-CCCEEEECCCChHHHCCHHHHHHhhhhcc
Confidence 4666 66689999999999999999999998643110000 011112233 89999999999999999999986521
Q ss_pred -CCCeEEechhhHHHHHHHHHhHHhhhccccc--ccCCCHHHHHHhhcccEEecCCCeEEe----CCEEEEEEeCCCCCC
Q psy8348 77 -FKGRCFMTHATKAIYRWLLSDYIKVSNISTE--QMLYTESDLEKSMDKIETINFHEEKDV----NGIKFSAYNAGHVLG 149 (622)
Q Consensus 77 -~~~~Iy~t~~t~~i~~~~l~d~~~~~~~~~~--~~ly~~~di~~~~~~i~~i~~~~~~~i----~gi~v~~~~aGH~~G 149 (622)
.+++||+|++|..+++.++.++.+....... .++|+..++...+.++..+.+++.+++ +|++++++++||++|
T Consensus 82 ~~~~pIY~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~~ggi~V~~~~aGHs~G 161 (717)
T 2i7x_A 82 ISRIQVYATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYNAGVCPG 161 (717)
T ss_dssp HHTCEEEEEHHHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEECSSSTT
T ss_pred cCCceEEecchhHHHHHHHHHHHHHhhccccccccccccHHHHHhhhhceEEecCCCEEEEeecCCCEEEEEECCCCCCC
Confidence 3689999999999998888877665432211 146788888888888999999999999 899999999999999
Q ss_pred cEEEEEEECCEEEEEEcCCCCCccccccccCC---------CCCCCcEEEEcccCCCCCCchhhhHHHHHHHHHHHHHHc
Q psy8348 150 AAMFLIEIAGVKILYTGDFSRQEDRHLMAAEI---------PPVKPDILITESTYGTHVHEQREEREGRFTSLIHDIVNR 220 (622)
Q Consensus 150 s~~~~I~~~~~~IlytGD~~~~~~~~l~~a~~---------~~~~~DvLI~EsTyg~~~~~~~~~~~~~~~~~i~~~l~~ 220 (622)
+++|.|+.++.+|+||||++...+.++..+.+ ...++|+||+||||+...|+.+. +..+|.+.+.+++++
T Consensus 162 s~~~~I~~~~~~IvytGD~~~~~~~~l~~~~~L~~~g~~l~~l~~~D~LI~EsTy~~~~h~~~~-~~~~l~~~i~~~l~~ 240 (717)
T 2i7x_A 162 GSIWCISTYSEKLVYAKRWNHTRDNILNAASILDATGKPLSTLMRPSAIITTLDRFGSSQPFKK-RSKIFKDTLKKGLSS 240 (717)
T ss_dssp CEEEEEECSSCEEEECSSCCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEEECCSCCCCSSCHHH-HHHHHHHHHHHHTST
T ss_pred cEEEEEEeCCCEEEEECCCCCCcccccCccccccccchhHHhccCCcEEEEcCCCCCCCCCCHH-HHHHHHHHHHHHHhC
Confidence 99999999999999999999877765543321 13489999999999998887764 556899999999999
Q ss_pred CCeEEEeecccchHHHHHHHHHHHH---HhCCCCCCccEEEECchHHHHHHHHHHhHHhhhHHHHHHHhc-C--CCcc-c
Q psy8348 221 GGRCLIPVFALGRAQELLLILDEYW---SLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQISI-N--NPFV-F 293 (622)
Q Consensus 221 gg~vliP~falGR~qEll~iL~~~~---~~~~~l~~ipI~~~s~~a~~~~~~y~~~~~~~~~~i~~~~~~-~--npf~-f 293 (622)
+|+|+||+|++||+|||+.+|.++| .+++.++++|||++|+++.+++++|+.+.+||++.+++.+.. . +||. |
T Consensus 241 ~G~VlIp~fa~gR~qell~~l~~~~~~~~~~~~~~~~pI~l~g~~a~~~~~i~~~~~e~l~~~~~~~~~~~~~~~pf~~~ 320 (717)
T 2i7x_A 241 DGSVIIPVDMSGKFLDLFTQVHELLFESTKINAHTQVPVLILSYARGRTLTYAKSMLEWLSPSLLKTWENRNNTSPFEIG 320 (717)
T ss_dssp TCEEEEEECTTTHHHHHHHHHHHHHTTC-------CCCEEEECTTTTHHHHHHHTCGGGSCHHHHHHHHSSSSCCTTCCT
T ss_pred CCeEEEEeccchHHHHHHHHHHHhhhhhhccccCCCceEEEECHHHHHHHHHHHHHHHHhChHHHHHHhcccccCCcccc
Confidence 9999999999999999999999998 244556789999999999999999999999999988777654 2 4999 7
Q ss_pred cccccccccccccc-CCCeEEEecCCCCCcchHHHHHHHHcCCCCCeEEEeccCC-CCCccccccc
Q psy8348 294 KHISNLKGIDHFED-IGPCVVMASPGMMQSGLSRELFEMWCTDAKNGVIIAGYCV-EGTLAKTILS 357 (622)
Q Consensus 294 ~~i~~l~~~~~~~~-~~p~Vvias~gml~~G~s~~~l~~~~~d~~n~vil~gy~~-~gt~~~~l~~ 357 (622)
+++.. .+.+.+.. .+||||+||+ ++|+++++|++|+++++|+|||+||++ +||+|++|++
T Consensus 321 ~~l~~-~~~~~l~~~~~p~VI~aSG---~gG~~~~~L~~~a~~~~n~VIf~g~~~p~gTlgr~l~~ 382 (717)
T 2i7x_A 321 SRIKI-IAPNELSKYPGSKICFVSE---VGALINEVIIKVGNSEKTTLILTKPSFECASSLDKILE 382 (717)
T ss_dssp TTEEE-CCGGGGGGCCSCEEEEEES---CHHHHHHHHHHHSSCTTEEEEECSSCCTTCHHHHHHHH
T ss_pred ccCcc-CCHHHHhhCCCCEEEEECC---CCHHHHHHHHHHcCCCcCEEEEEcCCCCCCChHHHHHh
Confidence 88764 33333333 5799988875 889999999999999999999999999 6999887764
No 7
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=100.00 E-value=5.7e-50 Score=448.15 Aligned_cols=383 Identities=19% Similarity=0.226 Sum_probs=293.9
Q ss_pred cEecCCCCCCCCcEEEEEECCeEEEEeCCCCC-CCC--CCC-CCCCCCC--CCCCCccEEEcCCCchhhhcchHHHHHhc
Q psy8348 2 KTLKGAGQEVGRSCIMLEFKNKSIMMDCGIHP-GLS--GMD-ALPFVDL--VESDQIDLLLISHFHLDHCGALPWFLLKT 75 (622)
Q Consensus 2 v~~LG~g~evG~sc~lI~~~~~~ILiD~G~~~-~~~--~~~-~lp~~~~--~~~~~Id~IlITH~H~DHiggLp~l~~~~ 75 (622)
+++|||.+|+|+||+++++++..||||||... +.. +.+ .+|.+.. .+..+||+|||||+|.||+||+|+++.+
T Consensus 11 i~~lGg~~eiG~n~~li~~~~~~iLID~G~~~~~~~~~g~d~iip~~~~l~~~~~~Id~I~lTH~H~DHiggl~~l~~~- 89 (555)
T 3zq4_A 11 VFALGGLGEIGKNTYAVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIPYLLRQ- 89 (555)
T ss_dssp EEEEESBSSSSCCEEEEEETTEEEEEEECCBCCCTTSTTCSEEEECCHHHHTTTTTEEEEEESCCCHHHHTTHHHHHTT-
T ss_pred EEEcCCCCccCCEEEEEEECCeEEEEeCCCCCCccccccccccccCHHHHhcCccCCCEEEECCCchhhhCCHHHHHHh-
Confidence 68999999999999999999999999999742 211 111 1232222 2568999999999999999999999876
Q ss_pred CCCCeEEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeCCC-CCCcEEEE
Q psy8348 76 GFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGH-VLGAAMFL 154 (622)
Q Consensus 76 ~~~~~Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~aGH-~~Gs~~~~ 154 (622)
++++||+++.|.++++..+.++.... ...+..+++++.++++++++++++++| ++||++|.
T Consensus 90 -~~~pIy~t~~t~~ll~~~l~~~~~~~-----------------~~~~~~v~~g~~~~ig~~~v~~~~~~H~~pgs~~~~ 151 (555)
T 3zq4_A 90 -VNIPVYGGKLAIGLLRNKLEEHGLLR-----------------QTKLNIIGEDDIVKFRKTAVSFFRTTHSIPDSYGIV 151 (555)
T ss_dssp -CCCCEEECHHHHHHHHHHHHHHSTTT-----------------TCCEEECCTTCCEEETTEEEEEEEEBCSSSSEEEEE
T ss_pred -cCceEEECHHHHHHHHHHHHHcCccC-----------------CCceEEeCCCCEEEECCEEEEEEeCCCCCcCcEEEE
Confidence 57899999999998877665431100 125678899999999999999999998 78999999
Q ss_pred EEECCEEEEEEcCCCCCccccccccC------CCCCCCcEEEEcccCCCCCCchhhhHHHHHHHHHHHHHHc-CCeEEEe
Q psy8348 155 IEIAGVKILYTGDFSRQEDRHLMAAE------IPPVKPDILITESTYGTHVHEQREEREGRFTSLIHDIVNR-GGRCLIP 227 (622)
Q Consensus 155 I~~~~~~IlytGD~~~~~~~~l~~a~------~~~~~~DvLI~EsTyg~~~~~~~~~~~~~~~~~i~~~l~~-gg~vliP 227 (622)
++.++++++||||+....+....... +...++|+||+||||+...+.. ..++.+.+.+.+++++ +|++++|
T Consensus 152 i~~~~~~il~tGD~~~~~~~~~g~~d~~~l~~l~~~~~d~Li~esT~~~~~~~~--~se~~v~~~i~~~~~~~~grvii~ 229 (555)
T 3zq4_A 152 VKTPPGNIVHTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNSENPEFT--MSERRVGESIHDIFRKVDGRIIFA 229 (555)
T ss_dssp EEETTEEEEECCSCBCCSSCSSSCCCHHHHHHHHHTCEEEEEEECTTTTCCSCC--CCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred EEECCcEEEEeCCCCCCCCcCcCccCHHHHHHhcccCCcEEEecCcccCCCCCC--CCHHHHHHHHHHHHHhCCCEEEEE
Confidence 99999999999999987654322111 1124799999999999876543 3346788888888876 8999999
Q ss_pred ecc--cchHHHHHHHHHHHHHhCCCCCCccEEEECchHHHHHHHHHHhHHhhhHHHHHHHhcCCCcc-cccccccccccc
Q psy8348 228 VFA--LGRAQELLLILDEYWSLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQISINNPFV-FKHISNLKGIDH 304 (622)
Q Consensus 228 ~fa--lGR~qEll~iL~~~~~~~~~l~~ipI~~~s~~a~~~~~~y~~~~~~~~~~i~~~~~~~npf~-f~~i~~l~~~~~ 304 (622)
+|+ +||+|+++.++.++ ++||++.++.+.+++.+++.+. ++ ..|.. |-. .+....
T Consensus 230 ~fasnv~R~q~il~~a~~~--------gr~v~v~grs~~~~~~~~~~~g-~l----------~~p~~~~v~---~~~~~~ 287 (555)
T 3zq4_A 230 TFASNIHRLQQVIEAAVQN--------GRKVAVFGRSMESAIEIGQTLG-YI----------NCPKNTFIE---HNEINR 287 (555)
T ss_dssp CCTTCHHHHHHHHHHHHTT--------TCEEEEESHHHHHHHHHHHGGG-SC----------CCCGGGEEC---GGGTTT
T ss_pred EChhHHHHHHHHHHHHHHH--------CCEEEEeCHHHHHHHHHHHHcC-Cc----------cCCcccEeC---HHHHhh
Confidence 999 99999999998865 6899999988888887776642 22 11211 111 112222
Q ss_pred cccCCCeEEEecCCCCCcchHHHHHHHHcCCCCC--------eEEEeccCCCCCccc--ccccCCceeeeccCeEeecee
Q psy8348 305 FEDIGPCVVMASPGMMQSGLSRELFEMWCTDAKN--------GVIIAGYCVEGTLAK--TILSEPEEVIGMSGQRLPLKM 374 (622)
Q Consensus 305 ~~~~~p~Vvias~gml~~G~s~~~l~~~~~d~~n--------~vil~gy~~~gt~~~--~l~~~~~~~~~~~g~~i~~~~ 374 (622)
+. .+++||++|.+ .|..+..|.+|+.++.+ +|+|+||+++|+.+. ++++ ...+..+
T Consensus 288 ~~-~~~~vii~tgs---qGe~~~~L~r~a~~~~~~~~~~~~d~vi~s~~~ipGne~~~~~~~~----------~l~~~g~ 353 (555)
T 3zq4_A 288 MP-ANKVTILCTGS---QGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTIN----------QLYRAGA 353 (555)
T ss_dssp SC-GGGEEEEECCT---TCCTTSHHHHHHSSCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHH----------HHHHTTC
T ss_pred CC-CCCEEEEeCCC---CchHHHHHHHHhcCCCCccccCCCCEEEEECCCCCCcHHHHHHHHH----------HHHHCCC
Confidence 22 35788888865 57778899999998776 999999999998743 1111 1122334
Q ss_pred eEE-----EEecccCCCHHHHHHHHHHhCCCeEEEEcCChHHHHHHHHHHHHhhcCCCCCceEEeeCCCCcEEEEe
Q psy8348 375 SVD-----YISFSAHTDYQQTSEFVRELRPAHVVLVHGEQNEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDLY 445 (622)
Q Consensus 375 ~v~-----~i~fS~Had~~el~~~i~~l~P~~VilvHGe~~~~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l~ 445 (622)
+|. .+++|+||+++||+.|++.++|+++||||||++++..+++ ++++.|.++ .++++|+||+.++|.
T Consensus 354 ~v~~~~~~~~h~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~~~~~~~~-~a~~~G~~~---~~~~~~~nG~~~~l~ 425 (555)
T 3zq4_A 354 EVIHGPLNDIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVK-LATDCGIPE---ENCFIMDNGEVLALK 425 (555)
T ss_dssp EEECSSSSCCCCCSSCCHHHHHHHHHHSCEEEEEEESBCHHHHHHHHH-HHHHTTCCG---GGBCCCCTTCEEEEE
T ss_pred EEEecCCcceEEeCCCCHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHH-HHHHcCCCc---ccEEEccCCCEEEEe
Confidence 443 4799999999999999999999999999999999999887 777777643 368999999999996
No 8
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=100.00 E-value=2.4e-47 Score=428.59 Aligned_cols=388 Identities=16% Similarity=0.233 Sum_probs=282.0
Q ss_pred cEecCCCCCCCCcEEEEEECCeEEEEeCCCCCCCCC---CC-CCCCCCCC--CCCCccEEEcCCCchhhhcchHHHHHhc
Q psy8348 2 KTLKGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSG---MD-ALPFVDLV--ESDQIDLLLISHFHLDHCGALPWFLLKT 75 (622)
Q Consensus 2 v~~LG~g~evG~sc~lI~~~~~~ILiD~G~~~~~~~---~~-~lp~~~~~--~~~~Id~IlITH~H~DHiggLp~l~~~~ 75 (622)
+++|||++++|+||++++.++..+|||||....... .+ .+|.+..+ +..+||+|||||+|.||+||+|+++...
T Consensus 19 i~~LGg~~eig~n~~li~~~~~~iLID~G~~~~~~~~~g~~~~~p~~~~l~~~~~~Id~I~iTH~H~DHiggl~~L~~~~ 98 (562)
T 3bk2_A 19 IIPLGGMGEIGKNITVFRFRDEIFVLDGGLAFPEEGMPGVDLLIPRVDYLIEHRHKIKAWVLTHGHEDHIGGLPFLLPMI 98 (562)
T ss_dssp EEEEESBSBSSCCEEEEEETTEEEEECCCCBCCCTTSTTCCEEEECCHHHHHTGGGEEEEECCCCCHHHHTTHHHHHHHH
T ss_pred EEEecCCCCcCCCEEEEEECCeEEEEECCCCCCccccccccccccchhhhhcCcccCcEEEECCCChHHhCCHHHHHHhh
Confidence 789999999999999999999999999997432211 11 12333222 5678999999999999999999998763
Q ss_pred CC----CCeEEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCC-EEEEEEeCCC-CCC
Q psy8348 76 GF----KGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNG-IKFSAYNAGH-VLG 149 (622)
Q Consensus 76 ~~----~~~Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~g-i~v~~~~aGH-~~G 149 (622)
+ +++||+++.|.++++..+.+. .. .. ....+..+++++.+++++ +++++++++| ++|
T Consensus 99 -~~~~~~~pIy~~~~t~~~l~~~l~~~----~~-------~~-----~~~~~~~v~~g~~~~lg~~~~v~~~~~~H~~~g 161 (562)
T 3bk2_A 99 -FGKESPVPIYGARLTLGLLRGKLEEF----GL-------RP-----GAFNLKEISPDDRIQVGRYFTLDLFRMTHSIPD 161 (562)
T ss_dssp -HCSCCCSEEEEEHHHHHHHHHHHHHT----TC-------CS-----TTSEEEEECTTCEEEETTTEEEEEEECCCSSSS
T ss_pred -ccccCCceEEeCHHHHHHHHHHHHHc----CC-------Cc-----CCceEEEECCCCEEEeCCCEEEEEEECCCCCcc
Confidence 2 689999999999887655432 00 00 012467889999999998 9999999999 689
Q ss_pred cEEEEEEECCEEEEEEcCCCCCcccccc-ccCCC------CCCCcEEEEcccCCCCCCchhhhHHHHHHHHHHHHHH-cC
Q psy8348 150 AAMFLIEIAGVKILYTGDFSRQEDRHLM-AAEIP------PVKPDILITESTYGTHVHEQREEREGRFTSLIHDIVN-RG 221 (622)
Q Consensus 150 s~~~~I~~~~~~IlytGD~~~~~~~~l~-~a~~~------~~~~DvLI~EsTyg~~~~~~~~~~~~~~~~~i~~~l~-~g 221 (622)
|++|.++.++.+++||||+......... ...+. ..++|+||+||||+...+... .+..+.+.+.++++ .+
T Consensus 162 s~~~~i~~~~~~il~tGD~~~~~~~~~g~~~d~~~l~~~~~~~~d~Li~EsT~~~~~g~~~--~e~~v~~~l~~~~~~~~ 239 (562)
T 3bk2_A 162 NSGVVIRTPIGTIVHTGDFKLDPTPIDGKVSHLAKVAQAGAEGVLLLIADATNAERPGYTP--SEMEIAKELDRVIGRAP 239 (562)
T ss_dssp CEEEEEEETTEEEEECCSCCCCSSCTTSCCCCCHHHHHHHHHCCSEEEEECTTTTCCSCCC--CHHHHHHHHHHHHHHCS
T ss_pred cEEEEEEECCeEEEEcCCCCCCCCCCCCCcccHHHHHHhhccCCCEEEecccCCCCCCCCC--hHHHHHHHHHHHHHhCC
Confidence 9999999999999999999876554321 11110 037999999999986654332 23456666666664 68
Q ss_pred CeEEEeecc--cchHHHHHHHHHHHHHhCCCCCCccEEEECchHHHHHHHHHHhHHhhhHHHHHHHhcCCCccccccccc
Q psy8348 222 GRCLIPVFA--LGRAQELLLILDEYWSLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQISINNPFVFKHISNL 299 (622)
Q Consensus 222 g~vliP~fa--lGR~qEll~iL~~~~~~~~~l~~ipI~~~s~~a~~~~~~y~~~~~~~~~~i~~~~~~~npf~f~~i~~l 299 (622)
|++++|+|+ +||+|+++.++.++ +.||++.+....+++.+|+.. ++++ ..++|...
T Consensus 240 grvii~~fas~~~r~q~il~~a~~~--------~r~V~v~g~s~~~~~~~~~~~-g~l~--------~~~~~i~~----- 297 (562)
T 3bk2_A 240 GRVFVTTFASHIHRIQSVIWAAEKY--------GRKVAMEGRSMLKFSRIALEL-GYLK--------VKDRLYTL----- 297 (562)
T ss_dssp SCEEEECCTTCHHHHHHHHHHHHHT--------TCEEEEECHHHHHHHHHHHHT-TSCC--------CSSCCBCT-----
T ss_pred CEEEEEEccccchHHHHHHHHHHHh--------CCEEEEEChHHHHHHHHHHhc-Cccc--------CCCCccCH-----
Confidence 999999999 99999999998764 568998655445677766542 3332 13444211
Q ss_pred ccccccccCCCeEEEecCCCCCcchHHHHHHHHcC--------CCCCeEEEeccCCCCCcccccccCCceeeeccCeEee
Q psy8348 300 KGIDHFEDIGPCVVMASPGMMQSGLSRELFEMWCT--------DAKNGVIIAGYCVEGTLAKTILSEPEEVIGMSGQRLP 371 (622)
Q Consensus 300 ~~~~~~~~~~p~Vvias~gml~~G~s~~~l~~~~~--------d~~n~vil~gy~~~gt~~~~l~~~~~~~~~~~g~~i~ 371 (622)
+....+ ..+++|+++|+++ |.....+.+|+. +++|+|+|+||+++||.+.. ..+.+...+
T Consensus 298 ~~~~~~-~~~~~vi~~tg~~---ge~~~~l~ria~~~h~~~~~~~~~~vi~s~~~~~G~~~~~--------~~~~~~l~~ 365 (562)
T 3bk2_A 298 EEVKDL-PDHQVLILATGSQ---GQPMSVLHRLAFEGHAKMAIKPGDTVILSSSPIPGNEEAV--------NRVINRLYA 365 (562)
T ss_dssp GGGTTS-CGGGEEEEECCTT---SCSHHHHHHHHTTCCSSCCCCTTCEEEECSCCCTTCHHHH--------HHHHHHHHH
T ss_pred HHHhcC-CCCCEEEEEcCCC---chhHHHHHhhhhcccccccCCCCCEEEEECCCCCCCeEeh--------hhhcCceee
Confidence 111111 1357788887653 444445777764 88999999999999997531 111122223
Q ss_pred ceeeE-----EEEecccCCCHHHHHHHHHHhCCCeEEEEcCChHHHHHHHHHHHHhhcCCCCCceEEeeCCCCcEEEEee
Q psy8348 372 LKMSV-----DYISFSAHTDYQQTSEFVRELRPAHVVLVHGEQNEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDLYF 446 (622)
Q Consensus 372 ~~~~v-----~~i~fS~Had~~el~~~i~~l~P~~VilvHGe~~~~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l~~ 446 (622)
..++| ..++||+|||++||.+|++.++|++|||||||++.+.++++ ++++.+.++ .++++|+||+.++|..
T Consensus 366 ~g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~~Pk~vipvHGe~~~~~~~~~-~~~~~g~~~---~~~~~~~~G~~~~l~~ 441 (562)
T 3bk2_A 366 LGAYVLYPPTYKVHASGHASQEELKLILNLTTPRFFLPWHGEVRHQMNFKW-LAESMSRPP---EKTLIGENGAVYRLTR 441 (562)
T ss_dssp TTCEEECTTTSSSCCCSSCCHHHHHHHHHHHCCSEEEEESBCHHHHHHHHH-HHHTSSSCC---SEECCCCTTEEEEECS
T ss_pred CCCEEEEccCCceEEeCCCCHHHHHHHHHhcCCCEEEEEcCCHHHHHHHHH-HHHHcCCCc---ceEEECCCCCEEEEeC
Confidence 33443 34689999999999999999999999999999999999886 555666543 3799999999999973
No 9
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=100.00 E-value=3.5e-40 Score=359.50 Aligned_cols=378 Identities=14% Similarity=0.101 Sum_probs=250.6
Q ss_pred cEecCCCCCCCCcEEEEEECCeEEEEeCCCCCCCCC------------CCCCCCCC--------------CCCCCCccEE
Q psy8348 2 KTLKGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSG------------MDALPFVD--------------LVESDQIDLL 55 (622)
Q Consensus 2 v~~LG~g~evG~sc~lI~~~~~~ILiD~G~~~~~~~------------~~~lp~~~--------------~~~~~~Id~I 55 (622)
|++|||++++|+||++|+.++..||||||....... ...+|.+. ..+..+||+|
T Consensus 9 i~~lG~~~~~g~n~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~i~~v 88 (429)
T 2az4_A 9 VTFHSGILTIGGTVIEVAYKDAHIFFDFGTEFRPELDLPDDHIETLINNRLVPELKDLYDPRLGYEYHGAEDKDYQHTAV 88 (429)
T ss_dssp EEEEECTTSSSCCEEEEEETTEEEEECCCCCCCTTCCCSCCCHHHHHHTTSSCCCSSCBCGGGCCCCCSSCCCCCSEEEE
T ss_pred EEEeeCCCccCCeEEEEEECCeEEEEecCCCCCcccCCCcchhhhccCCcccCCchhhhcccccccchhhhhccccCCEE
Confidence 789999999999999999999999999997532100 01223321 2467789999
Q ss_pred EcCCCchhhhcchHHHHHhcCCCCeEEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeC
Q psy8348 56 LISHFHLDHCGALPWFLLKTGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVN 135 (622)
Q Consensus 56 lITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~ 135 (622)
||||+|.||+||+|++.. +.+||+++.|..+++.+...... + ++...+......++..+++++.++++
T Consensus 89 ~lTH~H~DHiggl~~l~~----~~~iy~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~~~~~~g~~~~~g 156 (429)
T 2az4_A 89 FLSHAHLDHSRMINYLDP----AVPLYTLKETKMILNSLNRKGDF------L--IPSPFEEKNFTREMIGLNKNDVIKVG 156 (429)
T ss_dssp ECSCSCHHHHTTGGGBCT----TSCEEEEHHHHHHHHHHTTTSCS------S--CCCTTSCTTCCCCCEEECTTCEEEET
T ss_pred EECCchHHHhCcHhHhcC----CCCEEECHHHHHHHHHHHHhCcc------c--cccccccccccceEEEeCCCCeEEEC
Confidence 999999999999999753 57999999999887643211000 0 01100000112356788999999999
Q ss_pred CEEEEEEeCCC-CCCcEEEEEEECCEEEEEEcCCCCCccccc---cccCCCCCCCcEEEEcccCCCCC------Cchhhh
Q psy8348 136 GIKFSAYNAGH-VLGAAMFLIEIAGVKILYTGDFSRQEDRHL---MAAEIPPVKPDILITESTYGTHV------HEQREE 205 (622)
Q Consensus 136 gi~v~~~~aGH-~~Gs~~~~I~~~~~~IlytGD~~~~~~~~l---~~a~~~~~~~DvLI~EsTyg~~~------~~~~~~ 205 (622)
++++++++++| ++|+++|.++.++++++||||+........ ...+.. .++|+||+||||+... +.....
T Consensus 157 ~~~v~~~~~~H~~~gs~~~~i~~~~~~i~~tGD~~~~~~~~~~~~~~~~~~-~~~d~Li~Est~~~~~~~~~~~~~~~~~ 235 (429)
T 2az4_A 157 EISVEIVPVDHDAYGASALLIRTPDHFITYTGDLRLHGHNREETLAFCEKA-KHTELLMMEGVSISFPEREPDPAQIAVV 235 (429)
T ss_dssp TEEEEEEECCCSSTTCEEEEEEETTEEEEECCSCCSSSTTHHHHHHHHHHH-TTCSEEEEECCGGGSCCCCCCTTBCCCC
T ss_pred CEEEEEEECCCCChhhEEEEEEeCCcEEEECCCcccCCCchHHHHHHHHhc-cCCCEEEECCCCcCcccccccccCCCCC
Confidence 99999999999 789999999999999999999986543210 011111 2899999999998732 111123
Q ss_pred HHHHHHHHHHHHHHc-CCeEEEeecc---cchHHHHHHHHHHHHHhCCCCCCccEEEECchHHHHHHHHHHhHHhhhHHH
Q psy8348 206 REGRFTSLIHDIVNR-GGRCLIPVFA---LGRAQELLLILDEYWSLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRI 281 (622)
Q Consensus 206 ~~~~~~~~i~~~l~~-gg~vliP~fa---lGR~qEll~iL~~~~~~~~~l~~ipI~~~s~~a~~~~~~y~~~~~~~~~~i 281 (622)
.++.+.+.+.+++++ +++++++.++ .+|.|++ +.+ .+.||+++++++.+...+|......+....
T Consensus 236 s~~~~~~~i~~~~~~~~~rlil~h~~~~~~~r~~~~---a~~--------~gr~v~~~g~~~~~~~~~~~~~~~~~~~~~ 304 (429)
T 2az4_A 236 SEEDLVQHLVRLELENPNRQITFNGYPANVERFAKI---IEK--------SPRTVVLEANMAALLLEVFGIEVRYYYAES 304 (429)
T ss_dssp SHHHHHHHHHHHHHTCSSSCEEEEECTTCHHHHHHH---HHH--------CSSEEEEEHHHHHHHHHHHCCCCEEECSSS
T ss_pred CHHHHHHHHHHHHHhCCCcEEEEEeccchHHHHHHH---HHH--------hCCEEEEEChhHHHHHhhccccCeeEeccc
Confidence 345666777777765 4568998888 7888877 332 267999999988777665421111110000
Q ss_pred HHHHhcCCCcccccccccccccccccCCCeEEEecCCCCCcchHHHHHHHHcCCCCCeEEEeccCCCCCc---ccccccC
Q psy8348 282 RRQISINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFEMWCTDAKNGVIIAGYCVEGTL---AKTILSE 358 (622)
Q Consensus 282 ~~~~~~~npf~f~~i~~l~~~~~~~~~~p~Vvias~gml~~G~s~~~l~~~~~d~~n~vil~gy~~~gt~---~~~l~~~ 358 (622)
.....+.-......+.. ...+++.|++ | .|... ++ .+.+.||+++++++|+. ..+++
T Consensus 305 ----~~~~~~~~~~~~~~~~~--~~~~~~~ii~----~--~~~~~----~l--~~~~~vi~s~~~~~g~~~~~~~~~~-- 364 (429)
T 2az4_A 305 ----GKIPELNPALEIPYDTL--LKDKTDYLWQ----V--VNQFD----NL--QEGSLYIHSDAQPLGDFDPQYRVFL-- 364 (429)
T ss_dssp ----SCCTTSCGGGBCCHHHH--HHCSSSEEEE----C--CSCGG----GS--CTTCEEEEESCSSCSTTSHHHHHHH--
T ss_pred ----ccccccCccceecHHHH--hhCCCcEEEE----e--cCcHH----hh--CCCCEEEEeCCCCCcccchHHHHHH--
Confidence 00000000000001111 1123455544 2 23311 22 34689999999999884 12222
Q ss_pred CceeeeccCeEeeceeeEEEEecccCCCHHHHHHHHHHhCCCeEEEEcCChHHHHHHHHHHHHhhcCCCCCceEEeeCCC
Q psy8348 359 PEEVIGMSGQRLPLKMSVDYISFSAHTDYQQTSEFVRELRPAHVVLVHGEQNEMSRLKAALTREYEDDPNTSMELYNPRN 438 (622)
Q Consensus 359 ~~~~~~~~g~~i~~~~~v~~i~fS~Had~~el~~~i~~l~P~~VilvHGe~~~~~~l~~~l~~~~~~~~~~~~~v~~p~n 438 (622)
+...++.++|..+++|+|||++||++|++.++|++|||||||++.+.+ .. +.++++|+|
T Consensus 365 --------~~~~~~~~~v~~i~~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~~~~~-------~~------~~~~~~~~~ 423 (429)
T 2az4_A 365 --------DLLAKKDITFVRLACSGHAIPEDLDKIIALIEPQVLVPIHTLKPEKLE-------NP------YGERILPER 423 (429)
T ss_dssp --------HHHHHTTCEEEECCCCSSCCHHHHHHHHHHHCCSEEEEESCSCGGGCC-------CT------TSEECCCCT
T ss_pred --------HHHHhCCCEEEEEeecCCCCHHHHHHHHHhhCCCEEEECCCCchhhhh-------cC------CCcEEEeCC
Confidence 223455677778999999999999999999999999999999986443 11 247999999
Q ss_pred CcEEEE
Q psy8348 439 TVSVDL 444 (622)
Q Consensus 439 g~~v~l 444 (622)
|+.++|
T Consensus 424 g~~~~l 429 (429)
T 2az4_A 424 GEQIVL 429 (429)
T ss_dssp TCEEEC
T ss_pred CcEEeC
Confidence 999975
No 10
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=100.00 E-value=4.7e-32 Score=284.71 Aligned_cols=270 Identities=19% Similarity=0.238 Sum_probs=187.6
Q ss_pred CCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCC
Q psy8348 50 DQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFH 129 (622)
Q Consensus 50 ~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~ 129 (622)
.+||+|||||+|.||+||++++ ++++||+++.|.++++..+... -..+..++++
T Consensus 23 ~~i~ai~lTH~H~DHiggl~~l-----~~~pVy~s~~t~~ll~~~l~~~---------------------~~~~~~~~~~ 76 (336)
T 3zdk_A 23 GTARLFFLSHMHSDHTVGLSST-----WARPLYCSPITAHLLHRHLQVS---------------------KQWIQALEVG 76 (336)
T ss_dssp CSSCEEECCCCCGGGSTTCSTT-----CCSCEEECHHHHHHHHHHHCCC---------------------TTTEEECCTT
T ss_pred CCCCEEEECCChHHHHCchHHH-----cCCCEEecHHHHHHHHHhhhhc---------------------ccceEecCCC
Confidence 5899999999999999999996 3689999999999887543211 0134566777
Q ss_pred CeEEe-------CCEEEEEEeCCCCCCcEEEEEEECCEEEEEEcCCCCCccccccccCCCCCCCcEEEEcccCCCCCC--
Q psy8348 130 EEKDV-------NGIKFSAYNAGHVLGAAMFLIEIAGVKILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGTHVH-- 200 (622)
Q Consensus 130 ~~~~i-------~gi~v~~~~aGH~~Gs~~~~I~~~~~~IlytGD~~~~~~~~l~~a~~~~~~~DvLI~EsTyg~~~~-- 200 (622)
+.+.+ ++++++++++||++|+++|.|+.++++++||||++..++...........++|+||+||||+++.+
T Consensus 77 ~~~~i~~~~~~~g~~~v~~~~~~H~~gs~~~~i~~~~~~i~~tGD~~~~~~~~~~~~l~~~~~vD~Li~DsT~~~~~~~~ 156 (336)
T 3zdk_A 77 ESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFGTILYTGDFRYTPSMLKEPALTLGKQIHTLYLDNTNCNPALVL 156 (336)
T ss_dssp SEEEEESSSSSSCEEEEEEEECSSSTTCEEEEEEETTEEEEECCSCCCCGGGGGCGGGSSCCCCSEEEECCTBCCTTCCC
T ss_pred CeEEecCcccccCCEEEEEEECCCCcceEEEEEEeCCceEEEeCCCCCCcccccchhhhccCCccEEEEecCCCCCCCCC
Confidence 76654 789999999999999999999999999999999997766443222113458999999999999765
Q ss_pred chhhhHHHHHHHHHHHHHHcCCeEEEeecccchHHHHHHHHHHHHHhCCCCCCccEEEECchHHHHHHHHHHhHHhhhHH
Q psy8348 201 EQREEREGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLILDEYWSLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDR 280 (622)
Q Consensus 201 ~~~~~~~~~~~~~i~~~l~~gg~vliP~falGR~qEll~iL~~~~~~~~~l~~ipI~~~s~~a~~~~~~y~~~~~~~~~~ 280 (622)
+++.+..+.+.+.+.++ .||+++||+|++||+|+++.+++++ +.+|++.+..... ++ .
T Consensus 157 pse~~v~~~l~~~i~~~--~~g~vii~~f~vgR~q~i~~~a~~~--------grkV~v~gr~~~~----~~----~---- 214 (336)
T 3zdk_A 157 PSRQEAAHQIVQLIRKH--PQHNIKIGLYSLGKESLLEQLALEF--------QTWVVLSPRRLEL----VQ----L---- 214 (336)
T ss_dssp CCHHHHHHHHHHHHHTC--TTSEEEEEECSSSCHHHHHHHHHHH--------TCCEECCHHHHHH----HH----H----
T ss_pred CCHHHHHHHHHHHHHhC--CCCcEEEeecchHHHHHHHHHHHHc--------CCEEEEEhHHHHH----HH----h----
Confidence 44444445555555442 3679999999999999999999886 7899988643322 11 1
Q ss_pred HHHHHhcCCCcccccccccccccccccCCCeEEEecCCCCCcchHHHHHHHHcCCCCCeEEE--eccCCCCCcccccccC
Q psy8348 281 IRRQISINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFEMWCTDAKNGVII--AGYCVEGTLAKTILSE 358 (622)
Q Consensus 281 i~~~~~~~npf~f~~i~~l~~~~~~~~~~p~Vvias~gml~~G~s~~~l~~~~~d~~n~vil--~gy~~~gt~~~~l~~~ 358 (622)
+...+.|. ..+.. ..+-......+. +..+.+|+ +....|-+ +|...+|+ +
T Consensus 215 ----lg~~~~~~-----~~~~~-------~~i~~~~~~~i~----~~al~r~~-~~~~~i~i~~S~~~ipg~-------~ 266 (336)
T 3zdk_A 215 ----LGLADVFT-----VEEKA-------GRIHAVDHMEIC----HSNMLRWN-QTHPTIAILPTSRKIHSS-------H 266 (336)
T ss_dssp ----TTCCSCEE-----SCGGG-------CSEEEEEGGGCS----HHHHHHHH-HHSCEEEEEECSSCCCCS-------S
T ss_pred ----cCCccccC-----CHhHc-------CCCCcchhheeH----HHHHHhhh-CcCCeEEEEeccccccCC-------c
Confidence 11112121 00111 111111111111 45567787 33333333 23333331 0
Q ss_pred CceeeeccCeEeeceeeEEEEecccCCCHHHHHHHHHHhCCCeEEEEc-CChH
Q psy8348 359 PEEVIGMSGQRLPLKMSVDYISFSAHTDYQQTSEFVRELRPAHVVLVH-GEQN 410 (622)
Q Consensus 359 ~~~~~~~~g~~i~~~~~v~~i~fS~Had~~el~~~i~~l~P~~VilvH-Ge~~ 410 (622)
..+..+|+|+|++++||++|++.++|++++||| ||+.
T Consensus 267 ---------------~~~~~vh~S~Ha~~~EL~~~~~~~~P~~~iPvh~ge~~ 304 (336)
T 3zdk_A 267 ---------------PDIHVIPYSDHSSYSELRAFVAALKPCQVVPIVSRRPC 304 (336)
T ss_dssp ---------------TTEEEECCCSSCBHHHHHHHHHHHCCSCEEESCTTSCC
T ss_pred ---------------cCceeeEecCCCCHHHHHHHHHHhCCCEEEEEECCcCc
Confidence 124678999999999999999999999999999 9986
No 11
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=100.00 E-value=1.1e-31 Score=285.27 Aligned_cols=312 Identities=19% Similarity=0.238 Sum_probs=211.4
Q ss_pred CcEE-EEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHHHH
Q psy8348 13 RSCI-MLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKAIY 91 (622)
Q Consensus 13 ~sc~-lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~i~ 91 (622)
+.|. ++..+|..+++|+... -+..+||+|||||+|.||+||++. .++++||+++.|..++
T Consensus 26 ~~~p~~~~~pG~~ilVD~f~~--------------~~~~~IdaI~lTH~H~DHiggl~~-----~~~~pIy~s~~t~~ll 86 (367)
T 4b87_A 26 KTCPFYKKIPGTGFTVDAFQY--------------GVVEGCTAYFLTHFHSDHYAGLSK-----HFTFPVYCSEITGNLL 86 (367)
T ss_dssp CCCCGGGBCTTSSEEESCCSS--------------SSCTTCCEEECCCCCHHHHTTCST-----TCCSCEEECHHHHHHH
T ss_pred CCCceEEEECCCeEEEeCCCc--------------CCccCCcEEEECcChHHHhCCccc-----ccCCcEEECHHHHHHH
Confidence 4443 3446788899997520 145689999999999999999983 3688999999999877
Q ss_pred HHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeCCCCCCcEEEEEEE-CCEEEEEEcCCCC
Q psy8348 92 RWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEI-AGVKILYTGDFSR 170 (622)
Q Consensus 92 ~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~aGH~~Gs~~~~I~~-~~~~IlytGD~~~ 170 (622)
+..+.. . ...+..+++++.++++|++++++++||++|+++|.++. ++.+++||||+..
T Consensus 87 ~~~l~~--------------~-------~~~~~~l~~g~~~~ig~~~v~~~~agH~~gs~~~~i~~~~g~~il~tGD~~~ 145 (367)
T 4b87_A 87 KNKLHV--------------Q-------EQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFRA 145 (367)
T ss_dssp HHHSCC--------------C-------GGGEEECCBTSCEEETTEEEEEEECSSSTTCEEEEEECTTSCEEEECCSCCC
T ss_pred HHHhcc--------------c-------cceEEEeCCCCEEEECCEEEEEEeCCCcCCcEEEEEEcCCCcEEEEecCccc
Confidence 543210 0 02467888999999999999999999999999999987 4567999999998
Q ss_pred CccccccccCCCCCCCcEEEEcccCCCCC--CchhhhHHHHHHHHHHHHHHcCCeEE--EeecccchHHHHHHHHHHHHH
Q psy8348 171 QEDRHLMAAEIPPVKPDILITESTYGTHV--HEQREEREGRFTSLIHDIVNRGGRCL--IPVFALGRAQELLLILDEYWS 246 (622)
Q Consensus 171 ~~~~~l~~a~~~~~~~DvLI~EsTyg~~~--~~~~~~~~~~~~~~i~~~l~~gg~vl--iP~falGR~qEll~iL~~~~~ 246 (622)
.++... ..++..++|+||+||||+++. ++++++..+++.+.+.+.++++|+++ +|+|++||+|+++.+++++
T Consensus 146 ~~~~~~--~~l~~~~~D~Li~EsTy~~~~~~~ps~~~~~~~~~~~i~~~~~~~g~~~v~~~a~~igr~q~ll~ia~~~-- 221 (367)
T 4b87_A 146 DPSMER--SLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVL-- 221 (367)
T ss_dssp CGGGGG--SGGGTSCCCEEEECCTTCSTTCCCCCHHHHHHHHHHHHHHHHHHCTTEEEEEEESSSCCHHHHHHHHHHT--
T ss_pred Ccccch--hhhccCCCCEEEEecccCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEccchhHHHHHHHHHHHHh--
Confidence 776533 334445899999999999865 45666666677888888887788764 6888999999999999875
Q ss_pred hCCCCCCccEEEECchHHHHHHHHHHhHHhhhHHHHHHHhcCCCcccccccccccccccccCCCeEEEecCCCCCcchHH
Q psy8348 247 LHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQISINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSR 326 (622)
Q Consensus 247 ~~~~l~~ipI~~~s~~a~~~~~~y~~~~~~~~~~i~~~~~~~npf~f~~i~~l~~~~~~~~~~p~Vvias~gml~~G~s~ 326 (622)
+++|++.+..++ +++.+ + + +.+...+ ..+| ..-.|-+++.+.++.....
T Consensus 222 ------g~ki~v~~~~~~----il~~l-~-~-~~~~~~~-t~d~-----------------~~~~vh~~~~~~~~~~~l~ 270 (367)
T 4b87_A 222 ------GSKVGMSQEKYK----TLQCL-N-I-PEINSLI-TTDM-----------------CSSLVHLLPMMQINFKGLQ 270 (367)
T ss_dssp ------TCCEECCHHHHH----HHHTT-C-C-TTHHHHE-ESCG-----------------GGCSEEEEEGGGCSHHHHH
T ss_pred ------CCEEEEeHHHHH----HHHhc-C-C-chhhhhc-ccCC-----------------ccceEEEeecCcCCHHHHH
Confidence 789988753221 12111 0 0 0011110 0111 1234555554445545555
Q ss_pred HHHHHHcCCCCCeEEE--eccCCCCCcccccccCCceeeeccCeEeeceeeEEEEecccCCCHHHHHHHHHHhCCCeEEE
Q psy8348 327 ELFEMWCTDAKNGVII--AGYCVEGTLAKTILSEPEEVIGMSGQRLPLKMSVDYISFSAHTDYQQTSEFVRELRPAHVVL 404 (622)
Q Consensus 327 ~~l~~~~~d~~n~vil--~gy~~~gt~~~~l~~~~~~~~~~~g~~i~~~~~v~~i~fS~Had~~el~~~i~~l~P~~Vil 404 (622)
.++++..+.....+-| |||.-... ..-+.. + . ....-++.+..+++|.|++|.||.+|++.++|++|||
T Consensus 271 ~~~~~~~~~~~~~v~~~ptgw~~~~~--~~~~~~---~---~-~~~~~~~~~~~vpySeHss~~EL~~fv~~l~p~~iip 341 (367)
T 4b87_A 271 SHLKKCGGKYNQILAFRPTGWTHSNK--FTRIAD---V---I-PQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIP 341 (367)
T ss_dssp HHHHSGGGCCCEEEEEEECC------------CC---C---C-CEEETTEEEEEECCCSSCCHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHhhcccccEEEEcCcccccCCC--CCcccc---c---c-cccCCceEEEEEeccCCCCHHHHHHHHHhcCCCeEEC
Confidence 6666655544444333 44422211 000000 0 0 0112245678899999999999999999999999999
Q ss_pred EcCC
Q psy8348 405 VHGE 408 (622)
Q Consensus 405 vHGe 408 (622)
+|+-
T Consensus 342 tv~~ 345 (367)
T 4b87_A 342 TVNV 345 (367)
T ss_dssp CSSC
T ss_pred eecC
Confidence 9954
No 12
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.82 E-value=6.7e-20 Score=186.40 Aligned_cols=165 Identities=18% Similarity=0.188 Sum_probs=126.0
Q ss_pred cEecCCCCCC-----CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHh--
Q psy8348 2 KTLKGAGQEV-----GRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLK-- 74 (622)
Q Consensus 2 v~~LG~g~ev-----G~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~-- 74 (622)
|++||+++.+ +.||++|+.++..||||||... ...+... +++.+||+|||||.|.||++|++.+...
T Consensus 27 i~~LG~g~~~p~~~~~~~~~li~~~~~~iLiD~G~~~----~~~l~~~--~~~~~i~~v~iTH~H~DH~~gl~~l~~~~~ 100 (268)
T 1zkp_A 27 MTVVGFWGGFPEAGEATSGYLFEHDGFRLLVDCGSGV----LAQLQKY--ITPSDIDAVVLSHYHHDHVADIGVLQYARL 100 (268)
T ss_dssp EEEEECBSSSCCTTCCBSEEEEEETTEEEEECCCTTH----HHHHTTT--CCGGGCCEEECSCCCHHHHTTHHHHHHHHH
T ss_pred EEEEeCCCCcCCCCCCccEEEEEECCcEEEEECCHHH----HHHHHHh--CCcccCCEEEEecCCchhhCCHHHHHHHHH
Confidence 7899988766 5899999999999999999631 1111111 4567899999999999999999988764
Q ss_pred -------cCCCCeEEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeCCCC
Q psy8348 75 -------TGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHV 147 (622)
Q Consensus 75 -------~~~~~~Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~aGH~ 147 (622)
.....+||++..+.+.++... |. ...++..+..++.+++++++++++++.|+
T Consensus 101 ~~~~~~~~~~~~~i~~~~~~~~~l~~~~---------------~~------~~~~~~~~~~g~~~~~g~~~v~~~~~~H~ 159 (268)
T 1zkp_A 101 ITSATKGQLPELPIYGHTFDENGFHSLT---------------HE------PHTKGIPYNPEETLQIGPFSISFLKTVHP 159 (268)
T ss_dssp HHHHHHCCCCCEEEEECSSSHHHHHTTC---------------BT------TTEEEEECCTTSCEEETTEEEEEEECCSS
T ss_pred hcccccCCCCceEEEeCccHHHHHHhcc---------------cC------CccceEEecCCCeEEECCEEEEEEECCCC
Confidence 123578999998876543210 10 01234667788899999999999999999
Q ss_pred CCcEEEEEEECCEEEEEEcCCCCCccccccccCCCCCCCcEEEEcccCCCC
Q psy8348 148 LGAAMFLIEIAGVKILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGTH 198 (622)
Q Consensus 148 ~Gs~~~~I~~~~~~IlytGD~~~~~~~~l~~a~~~~~~~DvLI~EsTyg~~ 198 (622)
+|+++|+++.++.+++|+||+...++.... ..++|+||+|+||...
T Consensus 160 ~~~~~~~i~~~~~~i~~~GD~~~~~~~~~~-----~~~~d~li~e~~~~~~ 205 (268)
T 1zkp_A 160 VTCFAMRITAGNDIVVYSADSSYIPEFIPF-----TKDADLFICECNMYAH 205 (268)
T ss_dssp SCCEEEEEEETTEEEEECCSCCCCTTHHHH-----HTTCSEEEEECCBCTT
T ss_pred CCceEEEEEECCeEEEEeCCCCCCHHHHHH-----HcCCCEEEEECCCCcc
Confidence 999999999999999999999875542211 1379999999998754
No 13
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.82 E-value=6.1e-20 Score=190.21 Aligned_cols=172 Identities=22% Similarity=0.217 Sum_probs=126.7
Q ss_pred cEecCCCCCC-----CCcEEEEEE----CCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHH
Q psy8348 2 KTLKGAGQEV-----GRSCIMLEF----KNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFL 72 (622)
Q Consensus 2 v~~LG~g~ev-----G~sc~lI~~----~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~ 72 (622)
|++||+|+.+ +.||++|+. ++..+|||||... ...+.. ..++..+||+|||||.|.||++|++.++
T Consensus 4 i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~~iliD~G~~~----~~~l~~-~~~~~~~i~~i~iTH~H~DH~~gl~~l~ 78 (306)
T 2cbn_A 4 LIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGT----QHQLLH-TAFNPGKLDKIFISHLHGDHLFGLPGLL 78 (306)
T ss_dssp EEEEECBSSSCCSSCCBCEEEEECCCSSCCCEEEECCCTTH----HHHHHT-SCCCTTTEEEEECSCCCHHHHTTHHHHH
T ss_pred EEEEEcCCCCCCCCCCCCEEEEEeecCCCCcEEEEECCHHH----HHHHHH-hCCCHHHcCEEEEecCCchhhCChHHHH
Confidence 7899999876 569999998 8899999999621 011111 1235678999999999999999999987
Q ss_pred HhcC-----CCCeEEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeCCCC
Q psy8348 73 LKTG-----FKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHV 147 (622)
Q Consensus 73 ~~~~-----~~~~Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~aGH~ 147 (622)
.... .+.+||++..+...++..+..... ...|. .++..+..++.+++++++++++++.|.
T Consensus 79 ~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~-------~~~~~--------~~~~~~~~g~~~~~~~~~v~~~~~~H~ 143 (306)
T 2cbn_A 79 CSRSMSGIIQPLTIYGPQGIREFVETALRISGS-------WTDYP--------LEIVEIGAGEILDDGLRKVTAYPLEHP 143 (306)
T ss_dssp HHHHHTTCCSCEEEEESTTHHHHHHHHHHHTTC-------CCSSC--------EEEEECCSEEEEECSSEEEEEEECBSS
T ss_pred HHHHhcCCCCCeEEEcCccHHHHHHHHHHhhcc-------CCCce--------EEEEEcCCCcEeecCCEEEEEEEccCC
Confidence 6421 346799999998876654332110 00011 134566777888899999999999999
Q ss_pred CCcEEEEEEE--------------------------------------------------CCEEEEEEcCCCCCcccccc
Q psy8348 148 LGAAMFLIEI--------------------------------------------------AGVKILYTGDFSRQEDRHLM 177 (622)
Q Consensus 148 ~Gs~~~~I~~--------------------------------------------------~~~~IlytGD~~~~~~~~l~ 177 (622)
.++.+|.++. ++.+++|+||++..+... .
T Consensus 144 ~~~~gy~i~~~~~~~~~~~~~~~~~gv~~~~~~~~l~~g~~v~~~~G~~~~~~~~~~~~~~g~~i~~sgDt~~~~~~~-~ 222 (306)
T 2cbn_A 144 LECYGYRIEEHDAPGALNAQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAAL-D 222 (306)
T ss_dssp SCCEEEEEEECCCCCCBCHHHHHHTTCCSSHHHHHHHHTCCCEETTTEECCGGGTBCCCCCCCEEEECCSCBSCSTHH-H
T ss_pred CCccEEEEEecCccCccCHHHHHHcCCCCchHHHHhcCCCeEEcCCCcEEcHHHhcCCCCCCCEEEEeCCCCCHHHHH-H
Confidence 9999999985 467999999999765321 1
Q ss_pred ccCCCCCCCcEEEEcccCCCC
Q psy8348 178 AAEIPPVKPDILITESTYGTH 198 (622)
Q Consensus 178 ~a~~~~~~~DvLI~EsTyg~~ 198 (622)
. ..++|+||+||||+..
T Consensus 223 ~----~~~~D~li~E~t~~~~ 239 (306)
T 2cbn_A 223 L----AKGVDVMVHEATLDIT 239 (306)
T ss_dssp H----HTTCSEEEEECCBCGG
T ss_pred H----hcCCCEEEEECcCChh
Confidence 1 1379999999999864
No 14
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.82 E-value=7.6e-20 Score=190.89 Aligned_cols=173 Identities=18% Similarity=0.262 Sum_probs=127.1
Q ss_pred cEecCCCCCC-----CCcEEEEEE---CCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHH
Q psy8348 2 KTLKGAGQEV-----GRSCIMLEF---KNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLL 73 (622)
Q Consensus 2 v~~LG~g~ev-----G~sc~lI~~---~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~ 73 (622)
|++||+++.+ +.||++|+. ++..+|||||... ...+.. ..++..+||+|||||.|.||++|++.++.
T Consensus 3 i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~iLiD~G~~~----~~~l~~-~~~~~~~i~~I~iTH~H~DH~~gl~~l~~ 77 (320)
T 1y44_A 3 LLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDCGEAT----QHQMLH-TTIKPRKIEKIFITHMHGDHVYGLPGLLG 77 (320)
T ss_dssp EEEEECBSSSCCSSCCBCEEEEEETTTTSEEEEECCCTTH----HHHHTT-SSCCGGGEEEEECSBCCGGGTTTHHHHHH
T ss_pred EEEEecCCCCCCccCCCCEEEEEEecCCCcEEEEECCHHH----HHHHHH-cCCCHHHcCEEEEeCCChhhhCCHHHHHH
Confidence 7899999876 579999999 8999999999631 011111 12356789999999999999999999876
Q ss_pred hcC-----CCCeEEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeCCCCC
Q psy8348 74 KTG-----FKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVL 148 (622)
Q Consensus 74 ~~~-----~~~~Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~aGH~~ 148 (622)
... .+.+||++..+...++..+.... .+ ..|. .++..+..++.+++++++|++++++|+.
T Consensus 78 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~------~~-~~~~--------~~~~~~~~g~~~~~~~~~v~~~p~~H~~ 142 (320)
T 1y44_A 78 SRSFQGGEDELTVYGPKGIKAFIETSLAVTK------TH-LTYP--------LAIQEIEEGIVFEDDQFIVTAVSVIHGV 142 (320)
T ss_dssp HHHHTTCCSCEEEEESTTHHHHHHHHHHHTT------CC-CSSC--------EEEEECCSEEEEECSSEEEEEEECBSSS
T ss_pred HHHhcCCCCCEEEEeCHHHHHHHHHHHHhhc------cC-CCCc--------eEEEEcCCCceEecCCEEEEEEEccCCC
Confidence 431 24689999999877654432110 00 0011 1345667778888999999999999999
Q ss_pred CcEEEEEEE--------------------------------------------------CCEEEEEEcCCCCCccccccc
Q psy8348 149 GAAMFLIEI--------------------------------------------------AGVKILYTGDFSRQEDRHLMA 178 (622)
Q Consensus 149 Gs~~~~I~~--------------------------------------------------~~~~IlytGD~~~~~~~~l~~ 178 (622)
++++|.++. ++.+++|+||++..+... ..
T Consensus 143 ~~~gy~i~~~~~~~~~~~~~~~~~g~~~g~~~~~l~~g~~v~~~~G~i~~~~~~~~~~~~g~~i~~sgDt~~~~~~~-~~ 221 (320)
T 1y44_A 143 EAFGYRVQEKDVPGSLKADVLKEMNIPPGPVYQKIKKGETVTLEDGRIINGNDFLEPPKKGRSVVFSGDTRVSDKLK-EL 221 (320)
T ss_dssp SBEEEEEEECCBCCCC--------------------------------------CCCCBCCCEEEECCSCBCCHHHH-HH
T ss_pred CcceEEEecCCCcCccCHHHHHHcCCCCchhHHHhhCCCeEEcCCCeEEcHHHhcccCCCCCEEEEeCCCCCHHHHH-HH
Confidence 999999974 467999999999765321 11
Q ss_pred cCCCCCCCcEEEEcccCCCCC
Q psy8348 179 AEIPPVKPDILITESTYGTHV 199 (622)
Q Consensus 179 a~~~~~~~DvLI~EsTyg~~~ 199 (622)
..++|+||+||||....
T Consensus 222 ----~~~~D~li~E~t~~~~~ 238 (320)
T 1y44_A 222 ----ARDCDVMVHEATFAKED 238 (320)
T ss_dssp ----TTTCSEEEEECCBCTTC
T ss_pred ----hCCCCEEEEeccCCcch
Confidence 13799999999998753
No 15
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.79 E-value=2.1e-19 Score=181.97 Aligned_cols=156 Identities=15% Similarity=0.258 Sum_probs=115.2
Q ss_pred CCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHHH
Q psy8348 11 VGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKAI 90 (622)
Q Consensus 11 vG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~i 90 (622)
.+++|++|+.++..||||||.. .+. ..++..+||+|||||.|.||++|++.+....+.+.+||+++.+..+
T Consensus 37 r~~s~~li~~~~~~iLiD~G~~----~~~-----~~~~~~~id~IliTH~H~DHi~gl~~l~~~~~~~~~v~~~~~~~~~ 107 (258)
T 3g1p_A 37 RQPCSGVVKFNDAITLIDAGLH----DLA-----DRWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQGC 107 (258)
T ss_dssp BCBSEEEEEETTEEEEECCCCT----THH-----HHCCTTSSCEEECSCCCHHHHGGGTTTTTCSSSCEEEEECCCSSCS
T ss_pred ccCceEEEEECCcEEEEECCch----HHH-----hhcCcccCCEEEEccCchhHhCCHHHHhccCCCCeEEEeChhhhhH
Confidence 3579999999999999999941 111 1234568999999999999999999875443335789999877521
Q ss_pred HHHHHHhHHhhhcccccccCCCHHHHHHhhcc-cEEecCCCeEEeCCEEEEEEeCCCCCCcEEEEEEECCEEEEEEcCCC
Q psy8348 91 YRWLLSDYIKVSNISTEQMLYTESDLEKSMDK-IETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKILYTGDFS 169 (622)
Q Consensus 91 ~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~-i~~i~~~~~~~i~gi~v~~~~aGH~~Gs~~~~I~~~~~~IlytGD~~ 169 (622)
. +.++ . + . ... ...+..++.+++++++++++++.|+.++++|+++.++.+++|+||+.
T Consensus 108 ~-----~~~~------~-~-----~----~~~~~~~~~~g~~~~~g~~~v~~~~~~H~~~~~g~~i~~~~~~i~~~GDt~ 166 (258)
T 3g1p_A 108 D-----DLFK------H-P-----G----LLDFSHTVEPFVVFDLQGLQVTPLPLNHSKLTFGYLLETAHSRVAWLSDTA 166 (258)
T ss_dssp T-----TTTT------S-C-----T----TEEEEEECCTTCCEEETTEEEEEEECCSSSCCEEEEEECSSCEEEEECSCS
T ss_pred H-----HHhc------C-C-----C----ccccccccCCCCeEEECCEEEEEEECCCCCCceEEEEEeCCcEEEEECCCC
Confidence 1 0000 0 0 0 011 24678889999999999999999999999999999999999999999
Q ss_pred CCccccccccCCCCCCCcEEEEcccCCCC
Q psy8348 170 RQEDRHLMAAEIPPVKPDILITESTYGTH 198 (622)
Q Consensus 170 ~~~~~~l~~a~~~~~~~DvLI~EsTyg~~ 198 (622)
..++..... +...++|+||+|+||...
T Consensus 167 ~~~~~~~~~--l~~~~~Dlli~e~t~~~~ 193 (258)
T 3g1p_A 167 GLPEKTLKF--LRNNQPQVMVMDCSHPPR 193 (258)
T ss_dssp SCCHHHHHH--HHHTCCSEEEEECCBSSC
T ss_pred CCCHHHHHH--HHhCCCCEEEEeCCCCCc
Confidence 765532211 111379999999998754
No 16
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=99.75 E-value=2.7e-18 Score=182.82 Aligned_cols=189 Identities=19% Similarity=0.191 Sum_probs=118.4
Q ss_pred cEecCCCCC-----CCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcC
Q psy8348 2 KTLKGAGQE-----VGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTG 76 (622)
Q Consensus 2 v~~LG~g~e-----vG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~ 76 (622)
|++||.++. .+.||++|+.++..+|||||.. .........++..+||+|||||.|.||++|++.++....
T Consensus 3 l~~LGtg~~~p~~~r~~ss~ll~~~~~~iLiD~G~g-----~~~~l~~~~~~~~~id~I~iTH~H~DHi~gl~~l~~~~~ 77 (368)
T 3zwf_A 3 VTFLGTGAAYPSPTRGASAVVLRCEGECWLFDCGEG-----TQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTIS 77 (368)
T ss_dssp EEEEECBSSSCCSSSCSSEEEEEETTEEEEECCCTT-----HHHHHHHSSSCGGGEEEEECCCSSGGGTTTHHHHHHHHH
T ss_pred EEEECCCCCCCCCCCCccEEEEEECCeEEEEeCChh-----HHHHHHHcCCChHHCCEEEECCCChHHhCcHHHHHHHhh
Confidence 789998874 4689999999999999999942 110000113456789999999999999999999876532
Q ss_pred ---------CCCeEEechhhHHHHHHHHHhHHhh-------hcccccc-cCCCH--HHHH--HhhcccEEecCCC-----
Q psy8348 77 ---------FKGRCFMTHATKAIYRWLLSDYIKV-------SNISTEQ-MLYTE--SDLE--KSMDKIETINFHE----- 130 (622)
Q Consensus 77 ---------~~~~Iy~t~~t~~i~~~~l~d~~~~-------~~~~~~~-~ly~~--~di~--~~~~~i~~i~~~~----- 130 (622)
...+||++..+.+.++..+...... ....... ..... .... ...+.......++
T Consensus 78 ~~~~~~~~~~~l~iygp~~~~~~l~~~l~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~ 157 (368)
T 3zwf_A 78 LQSGSMVSKQPIEIYGPVGLRDFIWRTMELSHTELVFHYVVHELVPTADQCPAEELKEFAHVNRADSPPKEEQGRTILLD 157 (368)
T ss_dssp HHC------CCEEEEEETTHHHHHHHHHHHTTCCCSSCEEEEEECCCGGGSCC-------------------CCCEECCB
T ss_pred hccccccCCCCeEEEEcHHHHHHHHHHHHhhCcCCCceEEEEEeecCccccccccccccccccccccCcccccccccccc
Confidence 2568999999988776554321100 0000000 00000 0000 0000000001122
Q ss_pred -------eEEeCCEEEEEEeCCCCCCcEEEEEEEC---------------------------------------------
Q psy8348 131 -------EKDVNGIKFSAYNAGHVLGAAMFLIEIA--------------------------------------------- 158 (622)
Q Consensus 131 -------~~~i~gi~v~~~~aGH~~Gs~~~~I~~~--------------------------------------------- 158 (622)
.++.++++|+++++.|...+++|.|+..
T Consensus 158 ~~~~~~~~~~~~~~~V~a~~~~H~vp~~gy~i~e~~~~g~~~~ek~~~~gip~G~~~~~Lk~G~~v~~~dG~~i~~~~v~ 237 (368)
T 3zwf_A 158 SEENSYLLFDDEQFVVKAFRLFHRIPSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKLKNGISVVLENGVTISPQDVL 237 (368)
T ss_dssp TTTTBEEEEECSSEEEEEEEEESSSCEEEEEEEECC--------------------------------------------
T ss_pred cccCceeEEeCCCEEEEEEeccCCCceEEEEEEecCCcCccCHHHHHHcCCCchHHHHhcCCCCeEEecCCEEEEhHHhc
Confidence 2334789999999999999999999864
Q ss_pred -----CEEEEEEcCCCCCccccccccCCCCCCCcEEEEcccCCCC
Q psy8348 159 -----GVKILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGTH 198 (622)
Q Consensus 159 -----~~~IlytGD~~~~~~~~l~~a~~~~~~~DvLI~EsTyg~~ 198 (622)
+.+++|+||+.......+. .. ..++|+||+|+||...
T Consensus 238 ~~~~~g~~v~~~GDT~~~~~~~~~-~~--~~~~Dlli~Eat~~~~ 279 (368)
T 3zwf_A 238 KKPIVGRKICILGDCSGVVGDGGV-KL--CFEADLLIHEATLDDA 279 (368)
T ss_dssp ----CCCEEEEECSCSEECSSHHH-HH--TTTCSEEEEECCSCGG
T ss_pred cccccceEEEEEecCCcccchhHH-HH--hcCCCEEEEecCCChH
Confidence 7789999998751111111 11 2379999999999864
No 17
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.71 E-value=2.2e-17 Score=170.34 Aligned_cols=171 Identities=18% Similarity=0.228 Sum_probs=118.4
Q ss_pred cEecCCCCCCC---------------------CcEEEEEE--C-C--eEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEE
Q psy8348 2 KTLKGAGQEVG---------------------RSCIMLEF--K-N--KSIMMDCGIHPGLSGMDALPFVDLVESDQIDLL 55 (622)
Q Consensus 2 v~~LG~g~evG---------------------~sc~lI~~--~-~--~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~I 55 (622)
|++||.|+..| ++|++|+. + + .++|||||.. .. ..+ ...+..+||+|
T Consensus 31 v~~LG~g~~~G~P~~~c~c~~C~~~~~~~~R~~~s~li~~~~~~g~~~~iLID~G~~--~~--~~l---~~~~~~~id~I 103 (293)
T 3md7_A 31 FTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTGPD--FR--MQM---IDSGVHMLDAA 103 (293)
T ss_dssp EEEEECBCTTCBSCTTCCCTTSCTTCGGGCBCBCEEEEEEECTTCCEEEEEECCCTT--HH--HHH---HHHTCCCCSEE
T ss_pred EEEEeecCCCCcccCCCCCccCCccCCCCcccccEEEEEecCCCCceeEEEEECCcc--HH--HHH---HhcCCCcccEE
Confidence 68899887533 38999996 3 4 7999999942 11 111 11245789999
Q ss_pred EcCCCchhhhcchHHHHHhc---CCCCeEEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeE
Q psy8348 56 LISHFHLDHCGALPWFLLKT---GFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEK 132 (622)
Q Consensus 56 lITH~H~DHiggLp~l~~~~---~~~~~Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~ 132 (622)
||||.|.||++|++.+.... ....+||++..+.+.++..+....... ....|. ....+..+..++.+
T Consensus 104 liTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~~~~~~~l~~~~~~~~~~~----~~~~~~------~~~~~~~l~~g~~~ 173 (293)
T 3md7_A 104 VYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFETP----VGSSYP------PILSMHDIAPETPF 173 (293)
T ss_dssp ECSCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHHHHHHHHHCGGGTSCC----TTCCCC------CCEEEEECCTTCCE
T ss_pred EEcCCCchhhCCHHHHHHHhhcCCCceEEEECHHHHHHHHHhhhhhhccc----cccCCC------CceEEEEcCCCCcE
Confidence 99999999999999875422 356899999998877654332211100 000111 00135667788999
Q ss_pred EeCC----EEEEEEeCCCC-CCcEEEEEEECCEEEEEEcCCCCCccccccccCCCCCCCcEEEEcccCCC
Q psy8348 133 DVNG----IKFSAYNAGHV-LGAAMFLIEIAGVKILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGT 197 (622)
Q Consensus 133 ~i~g----i~v~~~~aGH~-~Gs~~~~I~~~~~~IlytGD~~~~~~~~l~~a~~~~~~~DvLI~EsTyg~ 197 (622)
++++ ++|+++++.|. .++++|.|+ +++|+||+....+...... .++|+||+|+++..
T Consensus 174 ~~g~~~~~~~v~~~~~~H~~~~~~g~~i~----~~~y~gDt~~~~~~~~~~~----~~~Dlli~e~~~~~ 235 (293)
T 3md7_A 174 SIEGAGGAIRFEPFSQVHGDIESLGFRIG----SVVYCTDVSAFPEQSLQYI----KDADVLIIGALQYR 235 (293)
T ss_dssp EECCTTCCEEEEEEEEEETTEEEEEEEET----TEEEECSCSBCCGGGHHHH----TTCSEEEEECCCSS
T ss_pred EECCCCCcEEEEEEEecCCCCCEEEEEEe----EEEEECCCCCCCHHHHHHh----cCCCEEEEeCccCC
Confidence 9999 99999999998 599999997 8999999985433322221 27999999998654
No 18
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.71 E-value=1.4e-16 Score=162.45 Aligned_cols=207 Identities=13% Similarity=0.129 Sum_probs=129.6
Q ss_pred cEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHh----c---CCCCeEEechh
Q psy8348 14 SCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLK----T---GFKGRCFMTHA 86 (622)
Q Consensus 14 sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~----~---~~~~~Iy~t~~ 86 (622)
+|+++ ++..+|||||.... ..+ .....+||+|||||.|.||++|++.++.. . ..+.+||+++.
T Consensus 13 ~~~~i--~~~~iLiD~G~~~~----~~l----~~~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~v~~~~~ 82 (280)
T 2e7y_A 13 TWIYY--SPERILFDAGEGVS----TTL----GSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPEG 82 (280)
T ss_dssp EEEEE--GGGTEEEEECTTHH----HHH----GGGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCEEEEEETT
T ss_pred EEEEE--CCcEEEEECCcchH----HHh----ccCccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCCCCCCEEEECcc
Confidence 45555 57899999995211 111 12456899999999999999999998531 1 12478999999
Q ss_pred hHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeC-----CEEEEEEeCCCCCC--cEEEEEEE--
Q psy8348 87 TKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVN-----GIKFSAYNAGHVLG--AAMFLIEI-- 157 (622)
Q Consensus 87 t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~-----gi~v~~~~aGH~~G--s~~~~I~~-- 157 (622)
+. .++..+..+.... . ...+. ..+..+..++.++++ ++++++++++|++| +++|.|+.
T Consensus 83 ~~-~l~~~~~~~~~~~---~-~~~~~--------~~~~~~~~g~~~~~g~~~~~~~~v~~~~~~H~~~~~~~g~~i~~~~ 149 (280)
T 2e7y_A 83 NR-AVEEYTEFIKRAN---P-DLRFS--------FNVHPLKEGERVFLRNAGGFKRYVQPFRTKHVSSEVSFGYHIFEVR 149 (280)
T ss_dssp CH-HHHHHHHHHHHHC---G-GGTTT--------EEEEEECTTCCEECCCSSCSCEEEEEEECCSCSSSCCEEEEEEEEE
T ss_pred HH-HHHHHHHHHhhcc---c-CCCCc--------eEEEEcCCCCEEEeCCcccCCEEEEEEEccCCCCCceEEEEEEEcc
Confidence 88 6654433221110 0 00010 145678889999998 89999999999999 99999974
Q ss_pred -------------------------------CCEEEEEEcCCCCCccccccccCCCCCCCcEEEEcccCCCCC------C
Q psy8348 158 -------------------------------AGVKILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGTHV------H 200 (622)
Q Consensus 158 -------------------------------~~~~IlytGD~~~~~~~~l~~a~~~~~~~DvLI~EsTyg~~~------~ 200 (622)
++.+++|+||+... .... ..++|+||+|+||.... |
T Consensus 150 ~~l~~~~~g~~~~~~~~l~~~~g~~~~~~~~~g~~i~ysgDt~~~---~~~~----~~~~d~li~e~t~~~~~~~~~~~H 222 (280)
T 2e7y_A 150 RKLKKEFQGLDSKEISRLVKEKGRDFVTEEYHKKVLTISGDSLAL---DPEE----IRGTELLIHECTFLDARDRRYKNH 222 (280)
T ss_dssp EEECGGGTTCCHHHHHHHHHHHCTGGGEEEEEEEEEEECCSCSSC---CHHH----HTTCSCEEEECCBC--------CC
T ss_pred cccCHhhcCCCHHHHHHHHhhcCCceecCCccCCEEEEECCCChH---HHHh----hcCCCEEEEeCCcCChhhHHhcCC
Confidence 45789999999876 1111 13799999999997652 2
Q ss_pred chhhhHHHHHHHHHHHHHHcCCeEEEeecccchHHHHHHHHHHHHHhCCCCCCccEEEE
Q psy8348 201 EQREEREGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLILDEYWSLHPELHDIPIYYA 259 (622)
Q Consensus 201 ~~~~~~~~~~~~~i~~~l~~gg~vliP~falGR~qEll~iL~~~~~~~~~l~~ipI~~~ 259 (622)
.+. .+..+.++++ +-+++++..|+..-..++-.++++..+. +.+.+|.+.
T Consensus 223 ~t~----~~a~~~~~~~--~~~~lvl~H~~~~~~~~~~~~~~~~~~~---~~~~~v~~a 272 (280)
T 2e7y_A 223 AAI----DEVMESVKAA--GVKKVILYHISTRYIRQLKSVIKKYREE---MPDVEILYM 272 (280)
T ss_dssp CBH----HHHHHHHHHH--TCCEEEEESCCGGGHHHHHHHHHHHHHH---CTTSEEEEC
T ss_pred CCH----HHHHHHHHHc--CCCEEEEEeecCcCcchHHHHHHHHHHh---CCCceEEEe
Confidence 222 2233333332 3357777777752211233333433222 235566554
No 19
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.64 E-value=1.1e-14 Score=145.42 Aligned_cols=137 Identities=16% Similarity=0.207 Sum_probs=106.8
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHHHH
Q psy8348 12 GRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKAIY 91 (622)
Q Consensus 12 G~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~i~ 91 (622)
|.||++|+.++.+||||||.... . ..+..++|+||+||.|.||+ +++.+......+.++|++..+...+
T Consensus 36 g~s~~li~~~~~~iliDpg~~~~--~--------~~~~~~id~VliTH~H~DH~-~~~~l~~~~~~~~~v~~~~~~~~~l 104 (235)
T 3kl7_A 36 KHGSLMLTYDNHSIQVDPVSEYA--D--------YTTFPKADIILITHEHGDHL-DPKAIQAVEKSDTEIIANENSQKKL 104 (235)
T ss_dssp ETTEEEEEETTEEEEESCCTTTC--C--------TTSSCCCSEEEECCSSTTTC-CHHHHHHHCCTTCEEEECHHHHHHH
T ss_pred cceEEEEEECCEEEEECCCCCcc--c--------hhhCCCCCEEEECCCccccC-CHHHHHHhhcCCCEEEEcHHHHHHh
Confidence 67999999999999999996321 1 12346899999999999999 5666554334578999998776543
Q ss_pred HHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCC-eEEeCCEEEEEEeCCCCCC----------cEEEEEEECCE
Q psy8348 92 RWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHE-EKDVNGIKFSAYNAGHVLG----------AAMFLIEIAGV 160 (622)
Q Consensus 92 ~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~-~~~i~gi~v~~~~aGH~~G----------s~~~~I~~~~~ 160 (622)
.+...+..++ .+++++++|+++++.|..+ +++|+|+.++.
T Consensus 105 -----------------------------~~~~~l~~g~~~~~~g~~~i~~~p~~H~~~~~~~~~~~~~~~g~~i~~~g~ 155 (235)
T 3kl7_A 105 -----------------------------GKGKVLKNGDTDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDGL 155 (235)
T ss_dssp -----------------------------TCSEECCTTCEECCSTTCEEEEEECCCCSTTGGGTSCTTTSEEEEEEETTE
T ss_pred -----------------------------cCcEEecCCCEEEEECCEEEEEEEeecCCCccccccCCCCceEEEEEeCCe
Confidence 1235677888 8999999999999988763 58999999999
Q ss_pred EEEEEcCCCCCccccccccCCCCCCCcEEEEccc
Q psy8348 161 KILYTGDFSRQEDRHLMAAEIPPVKPDILITEST 194 (622)
Q Consensus 161 ~IlytGD~~~~~~~~l~~a~~~~~~~DvLI~EsT 194 (622)
+++|+||+...++.. .+ .++|++++++.
T Consensus 156 ~i~~~GDt~~~~~~~----~l--~~~Dv~il~~~ 183 (235)
T 3kl7_A 156 RVYIAGDTEDIPEMK----DL--KDIDIAFLPVN 183 (235)
T ss_dssp EEEECCSCCSCGGGG----GC--CSCSEEEEECC
T ss_pred EEEEECCCCchhhHH----hh--cCCCEEEECCC
Confidence 999999998876431 22 37999999985
No 20
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.63 E-value=3e-16 Score=163.78 Aligned_cols=167 Identities=13% Similarity=0.150 Sum_probs=114.8
Q ss_pred CCCcEEEEEECCeE-EEEeCCCCCCCCCCCCCCC---CCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechh
Q psy8348 11 VGRSCIMLEFKNKS-IMMDCGIHPGLSGMDALPF---VDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHA 86 (622)
Q Consensus 11 vG~sc~lI~~~~~~-ILiD~G~~~~~~~~~~lp~---~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~ 86 (622)
.+++|++|+.++.+ ||||||.... ..+...+. ...++..+||+|||||.|.||++|++.+... .+.+||+++.
T Consensus 39 R~~ss~li~~~~~~~iLiD~G~~~~-~~l~~~~~l~~~~~~~~~~i~~i~lTH~H~DH~~gl~~l~~~--~~~~vy~~~~ 115 (321)
T 3jxp_A 39 RTQSSIALSDDGVHWILCNASPDIR-AQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLREG--CPHQVWCTDM 115 (321)
T ss_dssp BCBCEEEEESSSSSEEEECCCTTHH-HHHHTCGGGCCCSSSSCCSEEEEECSCCCHHHHGGGGGGGGG--CCEEEEECHH
T ss_pred ccceEEEEEeCCceEEEEeCCchHH-HHHHhcccccccccCCcccCCEEEECCCChhhhhhHHHHHhc--CCCeEEECHH
Confidence 45689999998876 9999995211 01111110 0124678999999999999999999998543 5789999999
Q ss_pred hHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEe---CCEEEEEEeCC--------CC-----CCc
Q psy8348 87 TKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDV---NGIKFSAYNAG--------HV-----LGA 150 (622)
Q Consensus 87 t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i---~gi~v~~~~aG--------H~-----~Gs 150 (622)
+.+.++..+. ...... ..+. --.+..+..++.+++ +|++|+++++. |. ..+
T Consensus 116 ~~~~l~~~~~-~f~~~~-----~~~~-------~i~~~~i~~g~~~~i~~~~~~~V~~~~v~H~~~~~~~H~~~~~~~~~ 182 (321)
T 3jxp_A 116 VHQDLTTGFP-LFNMLS-----HWNG-------GLQWNRIELEGSFVIDACPNLKFTPFPLRSAAPPYSPHRFDPHPGDN 182 (321)
T ss_dssp HHHHTTTTSC-HHHHHT-----TTTT-------CEEEEECCSSSCEECTTSTTEEEEEEEECCCCCTTCTTTTSCCTTSE
T ss_pred HHHHHHhhCc-cccccc-----cccC-------ceeEEEcCCCCeEEeccCCCeEEEEEEecCCccccccccccccCCCc
Confidence 8776542211 111000 0000 013456777889999 99999999987 65 378
Q ss_pred EEEEEE--ECCEEEEEEcCCCCCccccccccCCCCCCCcEEEEcccCCC
Q psy8348 151 AMFLIE--IAGVKILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGT 197 (622)
Q Consensus 151 ~~~~I~--~~~~~IlytGD~~~~~~~~l~~a~~~~~~~DvLI~EsTyg~ 197 (622)
++|.|+ .++++++|+||+...++...... .++|+||+|+||..
T Consensus 183 ~Gy~i~~~~~g~~i~y~~Dt~~~~~~~~~~~----~~~D~li~eat~~~ 227 (321)
T 3jxp_A 183 LGLMVEDTRTGGKLFYAPGLGQVDEKLLAMM----HGADCLLVDGTLWE 227 (321)
T ss_dssp EEEEEEETTTCCEEEEESSCCCCCHHHHHHH----HHCSEEEEECCCSS
T ss_pred EEEEEEecCCCcEEEEECCCCCCCHHHHHHh----cCCCEEEEeCCCCC
Confidence 999999 78899999999986443222211 26999999999864
No 21
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.59 E-value=1.4e-15 Score=156.08 Aligned_cols=146 Identities=14% Similarity=0.186 Sum_probs=102.0
Q ss_pred CCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCC--CCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhH
Q psy8348 11 VGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVD--LVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATK 88 (622)
Q Consensus 11 vG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~--~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~ 88 (622)
.+.|||+|+.++..+|||||.......+ ...+. ++++.+||+||+||.|.||+||++.+.++ ++.+||++..+.
T Consensus 53 ~~~n~~li~~~~~~iLID~G~~~~~~~~--~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~--~~~~v~~~~~~~ 128 (294)
T 3m8t_A 53 DGIAVYVIKTSQGLILMDTAMPQSTGMI--KDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKE--TGAQLVAGERDK 128 (294)
T ss_dssp SSSCCEEEEETTEEEEECCCCGGGHHHH--HHHHHHTTCCGGGEEEEECSCCCHHHHTTHHHHHHH--HCCEEEEEGGGH
T ss_pred CCeEEEEEEECCceEEEECCCchhHHHH--HHHHHHcCCCHHHCcEEEECCCCccccccHHHHhhc--cCCEEEEChHHH
Confidence 4679999999999999999962111101 11111 23455899999999999999999998776 468999999998
Q ss_pred HHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEe-CCCCCCcEEEEEEECCE----EEE
Q psy8348 89 AIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYN-AGHVLGAAMFLIEIAGV----KIL 163 (622)
Q Consensus 89 ~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~-aGH~~Gs~~~~I~~~~~----~Il 163 (622)
..++.... ..........|. .......+..++.++++|.++++++ +||++|+++|+++.++. +++
T Consensus 129 ~~~~~~~~----~~~~~~~~~~~~------~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~g~~~~~~~~~~~~~~~~~l 198 (294)
T 3m8t_A 129 PLLEGGYY----PGDEKNEDLAFP------AVKVDRAVKEGDRVTLGDTTLTAHATPGHSPGCTSWEMTVKDGKEDREVL 198 (294)
T ss_dssp HHHHHTCB----TTBTTCGGGCCC------CCCCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEE
T ss_pred HHHhcccc----cCccccccCCCC------CCCCceEeCCCCEEEeCCEEEEEEeCCCCCccCEEEEEEccCCCccceEE
Confidence 76643211 000000000010 0112356788999999999999886 68999999999986554 899
Q ss_pred EEcCCCC
Q psy8348 164 YTGDFSR 170 (622)
Q Consensus 164 ytGD~~~ 170 (622)
|+||+..
T Consensus 199 f~GD~~~ 205 (294)
T 3m8t_A 199 FFCSGTV 205 (294)
T ss_dssp ECCCCCC
T ss_pred EEcCccC
Confidence 9999874
No 22
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.59 E-value=3.1e-15 Score=152.27 Aligned_cols=150 Identities=19% Similarity=0.318 Sum_probs=102.3
Q ss_pred CCCcEEEEEECCeEEEEeCCCCCCCC---C-C---------------CCC-CCC--CCCCCCCccEEEcCCCchhhhcch
Q psy8348 11 VGRSCIMLEFKNKSIMMDCGIHPGLS---G-M---------------DAL-PFV--DLVESDQIDLLLISHFHLDHCGAL 68 (622)
Q Consensus 11 vG~sc~lI~~~~~~ILiD~G~~~~~~---~-~---------------~~l-p~~--~~~~~~~Id~IlITH~H~DHiggL 68 (622)
.+.||++|+.++..||||||...... + . ..+ ..+ .++++.+||+|++||.|.||+||+
T Consensus 41 ~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~ 120 (276)
T 2r2d_A 41 IPVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCV 120 (276)
T ss_dssp EEEEEEEEECSSCEEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHHHTTCCGGGCSEEECSCCSTTTSTTG
T ss_pred eeeEEEEEECCCCCEEEECCCCcccccccccccHhHHhhcCCCCChhhCHHHHHHHcCCCHHHCCEEEecCcccccCCCh
Confidence 35699999999999999999754320 0 0 000 001 124566899999999999999999
Q ss_pred HHHHHhcCCCCeEEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHh---hcccEEec-CCCeEEeC-CEEEEEEe
Q psy8348 69 PWFLLKTGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKS---MDKIETIN-FHEEKDVN-GIKFSAYN 143 (622)
Q Consensus 69 p~l~~~~~~~~~Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~---~~~i~~i~-~~~~~~i~-gi~v~~~~ 143 (622)
+.| .+++||+++.+.+.+....... .....|....+... ..++..++ +++.++++ ++++....
T Consensus 121 ~~~-----~~~~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~v~~~~ 188 (276)
T 2r2d_A 121 EYF-----GKSRLIAHEDEFATAVRYFATG-------DHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFG 188 (276)
T ss_dssp GGC-----SSSEEEEEHHHHHHHHHHHHTT-------CCSSSSCHHHHHHHTTSCCCEEEECTTCCEEEEETTEEEEEEE
T ss_pred hhC-----CCCEEEECHHHHHHHhcccccc-------ccccccchHHhhhhccccccceeccCCCceeEecCCEEEEeCC
Confidence 886 4689999998876543321110 00011222233221 12455666 57888885 89998883
Q ss_pred CCCCCCcEEEEEEECC-EEEEEEcCCCCCc
Q psy8348 144 AGHVLGAAMFLIEIAG-VKILYTGDFSRQE 172 (622)
Q Consensus 144 aGH~~Gs~~~~I~~~~-~~IlytGD~~~~~ 172 (622)
+||++|+++|+++.++ .+++|+||+....
T Consensus 189 pgHt~g~~~~~~~~~~~~~vl~~GD~~~~~ 218 (276)
T 2r2d_A 189 TGHASGMLGLAVRLEKQPGFLLVSDACYTA 218 (276)
T ss_dssp SSSSSSEEEEEEECSSSCEEEEEETTSCCH
T ss_pred CCCCceeEEEEEEcCCCceEEEEechhhhH
Confidence 4999999999999877 8999999998755
No 23
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.57 E-value=1.4e-15 Score=155.58 Aligned_cols=152 Identities=19% Similarity=0.263 Sum_probs=97.8
Q ss_pred CCCCcEEEEEECCeEEEEeCCCCCCCC-----------CCC-CCCCC--CCCCCCCccEEEcCCCchhhhcchHHHHHhc
Q psy8348 10 EVGRSCIMLEFKNKSIMMDCGIHPGLS-----------GMD-ALPFV--DLVESDQIDLLLISHFHLDHCGALPWFLLKT 75 (622)
Q Consensus 10 evG~sc~lI~~~~~~ILiD~G~~~~~~-----------~~~-~lp~~--~~~~~~~Id~IlITH~H~DHiggLp~l~~~~ 75 (622)
+.+.|||+|+.+++.||||||...... ... ..+.+ .++++.+||+|++||.|.||+||++.+..+.
T Consensus 45 ~~~~n~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~Id~IllTH~H~DHigg~~~l~~~~ 124 (280)
T 3esh_A 45 NLPTHPILIQTAQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHA 124 (280)
T ss_dssp EEECCCEEEECSSCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCTTSCC
T ss_pred EEeEEEEEEEECCEEEEEECCCCCcccccccccccCCcccchHHHHHHHcCCCHHHCCEEEeCCCcccccCccccccccc
Confidence 467799999999999999999753210 000 01111 1246678999999999999999999876531
Q ss_pred CC-CCeEEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEe-CCEEEEEEeCCCCCCcEEE
Q psy8348 76 GF-KGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDV-NGIKFSAYNAGHVLGAAMF 153 (622)
Q Consensus 76 ~~-~~~Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i-~gi~v~~~~aGH~~Gs~~~ 153 (622)
.| +++||+++.+...+... .... ...|....+.....++..++. ..++ +++++.. .+||++|+++|
T Consensus 125 ~fp~a~i~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~~~~~~~~~~~--~~~l~~gi~~~~-~pGHt~g~~~~ 192 (280)
T 3esh_A 125 IFENAIHVVQQDEWHEFIAP---NIRS------KSTYWDKNKGDYSNKLILFEK--HFEPVPGIKMQH-SGGHSFGHTII 192 (280)
T ss_dssp SSTTCEEEEEHHHHHHHHSC---CTTG------GGTSCGGGCCGGGGGEEEESS--EECSSTTEEEEE-CCSSSTTCEEE
T ss_pred CCCCCEEEECHHHHHHhhCc---cccc------ccchhhhhhhhhhheEEEeCC--CCeEcCCEEEEE-cCCCCcccEEE
Confidence 24 78999999877654311 0000 001111111111123333332 3333 4677744 48999999999
Q ss_pred EEEECCEEEEEEcCCCCCcc
Q psy8348 154 LIEIAGVKILYTGDFSRQED 173 (622)
Q Consensus 154 ~I~~~~~~IlytGD~~~~~~ 173 (622)
+++.++.+++||||+-+...
T Consensus 193 ~i~~~~~~vlftGD~~~~~~ 212 (280)
T 3esh_A 193 TIESQGDKAVHMGDIFPTTA 212 (280)
T ss_dssp EEEETTEEEEECGGGSCSGG
T ss_pred EEEECCcEEEEEEccCCchh
Confidence 99999999999999986543
No 24
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.56 E-value=5.8e-15 Score=149.38 Aligned_cols=147 Identities=12% Similarity=0.181 Sum_probs=99.6
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCC--CCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHH
Q psy8348 12 GRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVD--LVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKA 89 (622)
Q Consensus 12 G~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~--~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~ 89 (622)
+.|||+|+.++..+|||||.......+ ...+. .+++.+|++|++||.|.||+||++.+... ++++||+++.+..
T Consensus 24 ~~n~~li~~~~~~iLID~G~~~~~~~l--~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~--~~~~v~~~~~~~~ 99 (263)
T 1k07_A 24 DLASYLIVTPRGNILINSDLEANVPMI--KASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQ--TKAKYMVMDEDVS 99 (263)
T ss_dssp SBCCEEEEETTEEEEECCCCGGGHHHH--HHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHHHH--HCCEEEEEHHHHH
T ss_pred CeEEEEEEeCCceEEEECCCcccHHHH--HHHHHHcCCCHHHCcEEEeCCCCccccccHHHHHHh--cCCEEEEcHHHHH
Confidence 578999999999999999963111000 01111 23456899999999999999999998776 4689999998877
Q ss_pred HHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEe-CCCCCCcEEEEEEEC--C--EEEEE
Q psy8348 90 IYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYN-AGHVLGAAMFLIEIA--G--VKILY 164 (622)
Q Consensus 90 i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~-aGH~~Gs~~~~I~~~--~--~~Ily 164 (622)
.++......... + ..+. ..+. .......+..++.+.++|.++++++ +||++|+++|+++.. + .+++|
T Consensus 100 ~~~~~~~~~~~~---~---~~~~-~~~~-~~~~~~~~~~g~~~~~g~~~i~~i~~pGHt~g~~~~~~~~~~~~~~~~~lf 171 (263)
T 1k07_A 100 VILSGGKSDFHY---A---NDSS-TYFT-QSTVDKVLHDGERVELGGTVLTAHLTPGHTRGCTTWTMKLKDHGKQYQAVI 171 (263)
T ss_dssp HHHTTTTTCTTT---T---TCGG-GCCC-CCCCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEE
T ss_pred HHhccccccccc---C---cccc-ccCC-CCCcceEeCCCCEEEECCeEEEEEECCCCCCCcEEEEEecccCCceeEEEE
Confidence 654311000000 0 0000 0000 0113456788899999998888864 589999999999874 5 48999
Q ss_pred EcCCCC
Q psy8348 165 TGDFSR 170 (622)
Q Consensus 165 tGD~~~ 170 (622)
+||+..
T Consensus 172 ~GD~~~ 177 (263)
T 1k07_A 172 IGSIGV 177 (263)
T ss_dssp ECCCCC
T ss_pred ECCccc
Confidence 999865
No 25
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=99.54 E-value=3e-14 Score=144.52 Aligned_cols=153 Identities=21% Similarity=0.297 Sum_probs=106.6
Q ss_pred CCcEEEEEECCeEEEEeCCCCCC-----CCCCC----CCCCCC-CCCC----CCccEEEcCCCchhhhcchHHHHHhcCC
Q psy8348 12 GRSCIMLEFKNKSIMMDCGIHPG-----LSGMD----ALPFVD-LVES----DQIDLLLISHFHLDHCGALPWFLLKTGF 77 (622)
Q Consensus 12 G~sc~lI~~~~~~ILiD~G~~~~-----~~~~~----~lp~~~-~~~~----~~Id~IlITH~H~DHiggLp~l~~~~~~ 77 (622)
|.||++|+.++.+||+|++.... +.+.. .-|... .++. .++|+|||||.|.||+++++.+..+ .
T Consensus 11 Gha~~li~~~g~~iLiDp~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~id~iliTH~H~DH~~~~~~~~~~--~ 88 (264)
T 3rpc_A 11 RNATGKLTIKNTTFLIDPFLAPKDTYPGFEGTFNYQQRMPMVDLPLSMDDLLSNVTAVVVTHTHLDHWDDTAINSIP--K 88 (264)
T ss_dssp ETTEEEEEETTEEEEESCCCCCTTCBCCCTTBTTTTSCBSSSCCSSCHHHHHTTCCEEECSCCCGGGSCHHHHHHSC--T
T ss_pred eCcEEEEEECCEEEEeCcccCCCcCccCCCCcccccccCCCCCCCCCHHHccccCCEEEECCCchhhCCCHHHHhhc--c
Confidence 57999999999999999986431 10100 011100 1222 3799999999999999999876543 4
Q ss_pred CCeEEec-hhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeCCCCCC-------
Q psy8348 78 KGRCFMT-HATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLG------- 149 (622)
Q Consensus 78 ~~~Iy~t-~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~aGH~~G------- 149 (622)
+.++|++ ..+...++.. . +.....+ ++++++++++|+++++.|..+
T Consensus 89 ~~~v~~~~~~~~~~l~~~--------g----------------~~~~~~~--~~~~~~~~~~i~~~pa~H~~~~~~~~p~ 142 (264)
T 3rpc_A 89 SLPIFVQNTADKELITSQ--------G----------------FIDVRII--FESLEFNGITLRKTGGSHGTVEMYANPV 142 (264)
T ss_dssp TSCEEESSHHHHHHHHHT--------T----------------CSCEEEC--SSEEEETTEEEEEECCCSSCHHHHTSTT
T ss_pred CCeEEEeCHHHHHHHHhc--------C----------------CCeeEEe--cccEEECCEEEEEeccccCCcccccccc
Confidence 6899998 6655543211 0 0122333 578999999999999999875
Q ss_pred -------cEEEEEEEC-CEEEEEEcCCCCCccccccccCCCCCCCcEEEEcccC
Q psy8348 150 -------AAMFLIEIA-GVKILYTGDFSRQEDRHLMAAEIPPVKPDILITESTY 195 (622)
Q Consensus 150 -------s~~~~I~~~-~~~IlytGD~~~~~~~~l~~a~~~~~~~DvLI~EsTy 195 (622)
+++|+|+.+ +.+++|+||+...++....... .++|+++++++.
T Consensus 143 ~~~~~~~~~g~~i~~~~~~~i~~~GDt~~~~~~~~~~~~---~~~Dv~il~~g~ 193 (264)
T 3rpc_A 143 LAPLAGDAMGVIFEAADEPTVYLVGDTVWTSDVEKALLR---FDPNVIIMNTGY 193 (264)
T ss_dssp HHHHHCCCCEEEEECTTSCCEEECCSCCSCHHHHHHHHH---HCCSEEEEECSC
T ss_pred ccccccccEEEEEEeCCccEEEEECCcCchHHHHHHHHH---hCCCEEEEecCc
Confidence 489999987 7899999999987653221111 258999999974
No 26
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.53 E-value=9.3e-14 Score=139.96 Aligned_cols=143 Identities=22% Similarity=0.329 Sum_probs=97.0
Q ss_pred CCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhh
Q psy8348 8 GQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHAT 87 (622)
Q Consensus 8 g~evG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t 87 (622)
+.....|||+|+.++..+|||||...... .+ .+ ..+|++|++||.|.||+||++.+.++ ++.+||+++.+
T Consensus 15 g~~~~~~~~li~~~~~~iLiD~G~~~~~~---~l----~~-~~~i~~vi~TH~H~DH~gg~~~l~~~--~~~~i~~~~~~ 84 (261)
T 3adr_A 15 EFPEIATVYVMCGEKLTVMIDAGVSNSIA---DF----SF-LDKLDYIVLTHLHIDHIGLLPELLQV--YKAKVLVKSGF 84 (261)
T ss_dssp TCGGGSEEEEEECSSCEEEECCCCTTCCC---CC----TT-CSCCCEEECSCCSGGGTTTHHHHHHH--SCCEEEEETTC
T ss_pred CCCCceEEEEEEcCCcEEEEeCCCCCChh---hc----CC-CCCCcEEEECCCCccccCCHHHHHHH--hCCeEEECHHH
Confidence 33456789999877889999999743211 12 34 67899999999999999999998776 37899999887
Q ss_pred HHHHHH------HHHhHHhhh----cccccc-cCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEe-CCCCCCcEEEEE
Q psy8348 88 KAIYRW------LLSDYIKVS----NISTEQ-MLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYN-AGHVLGAAMFLI 155 (622)
Q Consensus 88 ~~i~~~------~l~d~~~~~----~~~~~~-~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~-aGH~~Gs~~~~I 155 (622)
...+.. ++....+.. ...... ..+. ..++..+..++.++++|.++++++ +||++|+++|.+
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~g~~~~~g~~~i~~~~~pGHt~~~~~~~~ 157 (261)
T 3adr_A 85 KKYLTSEDGLKKLNESAEKVLGDLYYVYGGLEKKLD-------QDKVIEVEGNEEFDLGGYRMRLIYTPGHARHHMSVLV 157 (261)
T ss_dssp THHHHSHHHHHHHHHHHHHHHTHHHHHHCCCCSCCC-------GGGEEEECSCCEEECSSSEEEEEECTTSCTTCEEEEE
T ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHhcccccCCC-------ccceEecCCCCEEEECCEEEEEEECCCCCCccEEEEE
Confidence 654431 111100000 000000 0000 013456788889999999898886 579999999864
Q ss_pred EECCEEEEEEcCCCCC
Q psy8348 156 EIAGVKILYTGDFSRQ 171 (622)
Q Consensus 156 ~~~~~~IlytGD~~~~ 171 (622)
.+++|+||+...
T Consensus 158 ----~~~lf~GD~~~~ 169 (261)
T 3adr_A 158 ----DDFLFTGDSAGA 169 (261)
T ss_dssp ----TTEEEEETSSCE
T ss_pred ----CCEEEEcCcccc
Confidence 369999998653
No 27
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.53 E-value=8.7e-15 Score=147.16 Aligned_cols=143 Identities=20% Similarity=0.226 Sum_probs=95.0
Q ss_pred CCCCCcEEEEEECCeEEEEeCCCCCCCCCC-CCC----------C----------CC--CCCCCCCccEEEcCCCchhhh
Q psy8348 9 QEVGRSCIMLEFKNKSIMMDCGIHPGLSGM-DAL----------P----------FV--DLVESDQIDLLLISHFHLDHC 65 (622)
Q Consensus 9 ~evG~sc~lI~~~~~~ILiD~G~~~~~~~~-~~l----------p----------~~--~~~~~~~Id~IlITH~H~DHi 65 (622)
.+++.||++|+.++..||||||........ ... | .+ ..+++.+||+|++||.|.||+
T Consensus 35 ~~~~~~~~lI~~~~~~iLiDtG~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~l~~~g~~~~~I~~VilTH~H~DH~ 114 (254)
T 3dha_A 35 LNLPVWCYLLETEEGPILVDTGMPESAVNNEGLFNGTFVEGQILPKMTEEDRIVNILKRVGYEPDDLLYIISSHLHFDHA 114 (254)
T ss_dssp EEEEEEEEEEEETTEEEEECCCCCGGGBTCTTTTTTSTTTTTEEEEBCGGGSHHHHHHHHTCCGGGCSEEECSCCSHHHH
T ss_pred EEEeeEEEEEECCCccEEEECCCChhhhcccccccccccccccccccCchhhHHHHHHHcCCCHHHCCEEEcCCChhhcC
Confidence 356789999999999999999975221000 000 0 00 123556799999999999999
Q ss_pred cchHHHHHhcCCCCeEEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeCC
Q psy8348 66 GALPWFLLKTGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAG 145 (622)
Q Consensus 66 ggLp~l~~~~~~~~~Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~aG 145 (622)
||++.| .+.+||+++.+.+.+.... .|... .......... ..++...++|+++... +|
T Consensus 115 gg~~~~-----~~~~i~~~~~~~~~~~~~~--------------~~~~~-~~~~~~~~~~-~~~~~~~~~~i~~~~~-pG 172 (254)
T 3dha_A 115 GGNGAF-----TNTPIIVQRTEYEAALHRE--------------EYMKE-CILPHLNYKI-IEGDYEVVPGVQLLYT-PG 172 (254)
T ss_dssp TTGGGC-----SSSCEEEEHHHHHHHHHCT--------------TSCGG-GSCTTSCEEE-ECSSEEEETTEEEEEC-CS
T ss_pred CChHHC-----CCCEEEECHHHHHHhhccc--------------ccccc-ccCcccceEE-ecCCccccCCEEEEEC-CC
Confidence 999876 2679999998876553210 01100 0000011222 2355556678887765 59
Q ss_pred CCCCcEEEEEEEC-CEEEEEEcCCCCCcc
Q psy8348 146 HVLGAAMFLIEIA-GVKILYTGDFSRQED 173 (622)
Q Consensus 146 H~~Gs~~~~I~~~-~~~IlytGD~~~~~~ 173 (622)
|++|+++++++.. +++++|+||+.....
T Consensus 173 Ht~g~~~~~~~~~~~~~vl~~GD~~~~~~ 201 (254)
T 3dha_A 173 HSPGHQSLFIETEQSGSVLLTIDASYTKE 201 (254)
T ss_dssp SSTTCEEEEEEETTTEEEEEEETTCSSHH
T ss_pred CCCCCEEEEEEeCCCCEEEEEecccchhh
Confidence 9999999999986 689999999986543
No 28
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.52 E-value=2.6e-13 Score=143.91 Aligned_cols=158 Identities=18% Similarity=0.225 Sum_probs=106.3
Q ss_pred CCcEEEEEEC-CeEEEEe--CCCCCC---------------CCCCCC-C------CC-CCCCCCCCccEEEcCCCchhhh
Q psy8348 12 GRSCIMLEFK-NKSIMMD--CGIHPG---------------LSGMDA-L------PF-VDLVESDQIDLLLISHFHLDHC 65 (622)
Q Consensus 12 G~sc~lI~~~-~~~ILiD--~G~~~~---------------~~~~~~-l------p~-~~~~~~~~Id~IlITH~H~DHi 65 (622)
|.||++|+.+ +.+|||| ||.... ..+... . |. ++..+..+||+|||||.|.||+
T Consensus 44 G~s~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~ql~~~~G~~~l~~~~~~~p~~l~~~~l~~id~VliTH~H~DHi 123 (360)
T 2wyl_A 44 GCTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDHNDHI 123 (360)
T ss_dssp ETTEEEEECTTCCEEEESCCCCCCCCCCCC----------------CCCCCCBCSCCCCCGGGCCCCSEEECSBSCTTTC
T ss_pred cccEEEEEeCCCCEEEEeecCCCCcccccccccccchhhhhhcCccccCCCcccCCCccCHHHcCCCCEEEECCCchhcC
Confidence 4689999995 8999999 874210 000000 1 11 1111246899999999999999
Q ss_pred c--chHHHHHhcCCCCeEEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEe
Q psy8348 66 G--ALPWFLLKTGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYN 143 (622)
Q Consensus 66 g--gLp~l~~~~~~~~~Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~ 143 (622)
| ++..+..+...+.+||++..+.+.++.. . +. ..++..++.++.+++++++|++++
T Consensus 124 g~~~l~~l~~~~~~~~~v~~p~~~~~~l~~~--------g-------~~-------~~~~~~l~~g~~~~~g~~~v~~~~ 181 (360)
T 2wyl_A 124 DVNVAAAVMQNCADDVPFIGPKTCVDLWIGW--------G-------VP-------KERCIVVKPGDVVKVKDIEIHALD 181 (360)
T ss_dssp CHHHHHHHHHHSCTTCCEEECHHHHHHHHHH--------T-------CC-------GGGEEECCTTCEEEETTEEEEEEE
T ss_pred CHHHHHHHHhcCCCCCEEEEcHHHHHHHHHc--------C-------CC-------hheEEEcCCCCEEEECCEEEEEEe
Confidence 7 4555555432268999998776654321 0 10 014677888999999999999999
Q ss_pred CCCC------------C---------CcEEEEEEECCEEEEEEcCCCCCccccccccCCCCCCCcEEEEccc
Q psy8348 144 AGHV------------L---------GAAMFLIEIAGVKILYTGDFSRQEDRHLMAAEIPPVKPDILITEST 194 (622)
Q Consensus 144 aGH~------------~---------Gs~~~~I~~~~~~IlytGD~~~~~~~~l~~a~~~~~~~DvLI~EsT 194 (622)
+.|. + ++++|+|+.++.+++|+||+...++....... .++|++++..+
T Consensus 182 ~~H~~~~~~~~~~~h~~g~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~~~~~~i~~~---~~~Dv~il~~g 250 (360)
T 2wyl_A 182 AFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNYYAKHGNE---HQIDVALGSYG 250 (360)
T ss_dssp CCCC------------------CCTTTBEEEEEEETTEEEEECTTCCCCTTHHHHHHH---SCCCEEEEEBC
T ss_pred ccCcccccccccccccccccccccCcccEEEEEEECCcEEEEeCCCCcCHHHHHHhhC---CCCCEEEecCC
Confidence 8664 2 37899999999999999999876543221111 26899998654
No 29
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.52 E-value=4.4e-15 Score=145.78 Aligned_cols=132 Identities=15% Similarity=0.160 Sum_probs=97.0
Q ss_pred CCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHH
Q psy8348 10 EVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKA 89 (622)
Q Consensus 10 evG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~ 89 (622)
..+.||++|+.++..+|||||..... ....+..+......+|++|++||.|.||+||++.+.+ ++.+||++..+.+
T Consensus 28 ~~~~n~~li~~~~~~iLiD~G~~~~~-~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~---~~~~v~~~~~~~~ 103 (219)
T 3l6n_A 28 EYSANSMYLVTKKGVVLFDVPWEKVQ-YQSLMDTIKKRHNLPVVAVFATHSHDDRAGDLSFFNN---KGIKTYATAKTNE 103 (219)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSGGG-HHHHHHHHHHHHSCCEEEEECSSSSTTTTCCTHHHHH---TTCEEEECHHHHH
T ss_pred cccceEEEEEeCCEEEEEeCCCChHH-HHHHHHHHHHhcCCceeEEEecCCCcccccCHHHHHh---CCCEEEEcHHHHH
Confidence 45679999999999999999963211 0000111111113689999999999999999999864 4789999998876
Q ss_pred HHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEe--CCCCCCcEEEEEEECCEEEEEEcC
Q psy8348 90 IYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYN--AGHVLGAAMFLIEIAGVKILYTGD 167 (622)
Q Consensus 90 i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~--aGH~~Gs~~~~I~~~~~~IlytGD 167 (622)
.++.. . .......+..++.+.+++.++++++ +||++|+++++++ +.+++|+||
T Consensus 104 ~~~~~--------~---------------~~~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~g~~~~~~~--~~~~lf~GD 158 (219)
T 3l6n_A 104 FLKKD--------G---------------KATSTEIIKTGKPYRIGGEEFVVDFLGEGHTADNVVVWFP--KYNVLDGGC 158 (219)
T ss_dssp HHHHT--------T---------------CCCCSEECCTTSEEEETTEEEEEECCCCSSSSSCCEEEET--TTTEEEEET
T ss_pred HHHhc--------C---------------CCCCcEecCCCCEEEECCEEEEEEeCCCCCCCCCEEEEEC--CCCEEEECC
Confidence 55321 0 0013456788899999999999985 6999999999875 667999999
Q ss_pred CCC
Q psy8348 168 FSR 170 (622)
Q Consensus 168 ~~~ 170 (622)
+-.
T Consensus 159 ~~~ 161 (219)
T 3l6n_A 159 LVK 161 (219)
T ss_dssp TSC
T ss_pred eee
Confidence 764
No 30
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.50 E-value=1.5e-14 Score=141.04 Aligned_cols=142 Identities=18% Similarity=0.223 Sum_probs=95.4
Q ss_pred CCCcEEEEEE--CCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhH
Q psy8348 11 VGRSCIMLEF--KNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATK 88 (622)
Q Consensus 11 vG~sc~lI~~--~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~ 88 (622)
.+.|||+|+. +++.+|||||.. ...+ ...+.... .++++|++||.|.||+||++.+.++. +.+||+++.+.
T Consensus 11 ~~~n~~li~~~~~~~~iLiD~G~~--~~~l--~~~l~~~g-~~i~~ii~TH~H~DH~gg~~~l~~~~--~~~v~~~~~~~ 83 (210)
T 2xf4_A 11 FSQNCSLIWCEQTRLAALVDPGGD--AEKI--KQEVDASG-VTLMQILLTHGHLDHVGAASELAQHY--GVPVIGPEKED 83 (210)
T ss_dssp TTEEEEEEECTTTCEEEEECCCSC--HHHH--HHHHHHHT-CEEEEEECSCSCHHHHTTHHHHHHHH--TCCEECCCGGG
T ss_pred cccEEEEEEecCCCcEEEEcCCCC--HHHH--HHHHHHcC-CceeEEEECCCChhhhcCHHHHHHHc--CCcEEEecchH
Confidence 5689999984 678999999942 1100 11111111 25899999999999999999987764 57999998887
Q ss_pred HHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEe-CCCCCCcEEEEEEECCEEEEEEcC
Q psy8348 89 AIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYN-AGHVLGAAMFLIEIAGVKILYTGD 167 (622)
Q Consensus 89 ~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~-aGH~~Gs~~~~I~~~~~~IlytGD 167 (622)
+.+...+....+........ .......+..++.+++++.++++++ +||++|+++++++ +.+++|+||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~g~~~~~~~--~~~~lf~GD 151 (210)
T 2xf4_A 84 EFWLQGLPAQSRMFGLDECQ----------PLTPDRWLNDGDRVSVGNVTLQVLHCPGHTPGHVVFFDE--QSQLLISGD 151 (210)
T ss_dssp HHHHHTHHHHHHHTTCCCCC----------CCCCSBCCCTTCEEEETTEEEEEEECCSSSTTCEEEEET--TTTEEEEET
T ss_pred HHHhccchhhhhhcCCcccC----------CCCCceEECCCCEEEECCeEEEEEECCCCCCCcEEEEeC--CCCEEEECC
Confidence 66543322211110000000 0012345677888999999888874 5899999999874 778999999
Q ss_pred CCCC
Q psy8348 168 FSRQ 171 (622)
Q Consensus 168 ~~~~ 171 (622)
+...
T Consensus 152 ~~~~ 155 (210)
T 2xf4_A 152 VIFK 155 (210)
T ss_dssp SEET
T ss_pred Eecc
Confidence 8653
No 31
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=99.50 E-value=4.7e-13 Score=142.97 Aligned_cols=158 Identities=18% Similarity=0.233 Sum_probs=107.6
Q ss_pred CCcEEEEEEC-CeEEEEe--CCCCCC------------------CCCC----CCCCC-CCCCCCCCccEEEcCCCchhhh
Q psy8348 12 GRSCIMLEFK-NKSIMMD--CGIHPG------------------LSGM----DALPF-VDLVESDQIDLLLISHFHLDHC 65 (622)
Q Consensus 12 G~sc~lI~~~-~~~ILiD--~G~~~~------------------~~~~----~~lp~-~~~~~~~~Id~IlITH~H~DHi 65 (622)
|.||++|+.+ +.+|||| ||.... ...+ ...|. ++..+..+||+|||||.|.||+
T Consensus 68 G~s~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~q~~~~~G~~~l~p~~~~~p~~l~~~~~~~iD~IliTH~H~DHi 147 (379)
T 3bv6_A 68 GCTGIWLKSAGNTNLSIDFWCGTGKKTQKNRLMNTQHQMMRMGGVEALQPNLRTSIFPLDPFAIKEIDAVLASHDHADHI 147 (379)
T ss_dssp ETTEEEEEETTCCEEEESCCCCCCCCCSSCCBCCTTCHHHHHHCCCBCCCCCBCSCCCSCGGGCCCCSEEECSBCSGGGC
T ss_pred cccEEEEEeCCCCEEEEccCCCCCccccccccccccchhheecCccccCccccCCCCccChHHCCCCCEEEECCCCcccC
Confidence 5689999996 8999999 774210 0000 00111 1111256899999999999999
Q ss_pred c--chHHHHHhcCCCCeEEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEe
Q psy8348 66 G--ALPWFLLKTGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYN 143 (622)
Q Consensus 66 g--gLp~l~~~~~~~~~Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~ 143 (622)
| ++..+..+...+.+||++..+.+.++.. . +. ..++..++.++.+++++++|++++
T Consensus 148 g~~~l~~l~~~~~~~~~v~~~~~~~~~l~~~--------g-------~~-------~~~~~~l~~g~~~~~g~~~v~~~~ 205 (379)
T 3bv6_A 148 DVNVAAAVLQNCGEHVKFIGPQACVDLWLGW--------G-------VP-------QERCIVAKVGDVLEIGDVKIRVLD 205 (379)
T ss_dssp CHHHHHHHHHHSCTTCEEEECHHHHHHHHHH--------T-------CC-------GGGEEECCTTCEEEETTEEEEEEE
T ss_pred ChHHHHHHHhcCCCCcEEEecHHHHHHHHHc--------C-------CC-------hhhEEEeCCCCEEEECCEEEEEEe
Confidence 7 5555555432268999998776654321 0 10 014577888999999999999999
Q ss_pred CCCC-------------C---------CcEEEEEEECCEEEEEEcCCCCCccccccccCCCCCCCcEEEEccc
Q psy8348 144 AGHV-------------L---------GAAMFLIEIAGVKILYTGDFSRQEDRHLMAAEIPPVKPDILITEST 194 (622)
Q Consensus 144 aGH~-------------~---------Gs~~~~I~~~~~~IlytGD~~~~~~~~l~~a~~~~~~~DvLI~EsT 194 (622)
+.|. . ++++|+|+.++.+++|+||+...++....... .++|++++...
T Consensus 206 ~~H~~~~~~~p~~h~~~~G~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~~~~~~i~~~---~~~Dv~il~~g 275 (379)
T 3bv6_A 206 SFDRTALVTLPKGVSSYDKAILDGMDERAVNYLIETSGGSVYHSGDSHYSNYYAKHGND---YQIDVALLSYG 275 (379)
T ss_dssp CCCHHHHTCCCTTSCSSCGGGGGCHHHHBEEEEEEETTEEEEECTTCCCCTTHHHHHHH---SCCSEEEEEBC
T ss_pred cccccccccccccccccccccccccCCceEEEEEEeCCeEEEEeCCCCccHHHHHHhhc---CCCCEEEecCC
Confidence 9774 2 27999999999999999999876543221111 16899998654
No 32
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.49 E-value=1.3e-13 Score=148.30 Aligned_cols=128 Identities=18% Similarity=0.305 Sum_probs=97.6
Q ss_pred CcEEEEEECCeEEEEeCCCCCCCCC-CCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHHHH
Q psy8348 13 RSCIMLEFKNKSIMMDCGIHPGLSG-MDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKAIY 91 (622)
Q Consensus 13 ~sc~lI~~~~~~ILiD~G~~~~~~~-~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~i~ 91 (622)
-|||||..+++.+|||+|.....+. ++.+. ..+++.+||+|++||.|.||+||++.++++.+.+.+||+++.+..++
T Consensus 52 yNsYLI~~~~~~vLIDtg~~~~~~~~l~~l~--~~i~~~~IdyIi~TH~h~DH~G~l~~l~~~~~~~~~v~~s~~~~~~l 129 (410)
T 4dik_A 52 YNAYLVKLNGANVLIDGWKGNYAKEFIDALS--KIVDPKEITHIIVNHTEPDASGSLPATLKTIGHDVEIIASNFGKRLL 129 (410)
T ss_dssp EEEEEEECSSCEEEECCCCGGGHHHHHHHHT--TTSCGGGCCEEECSCCCHHHHTTHHHHHHHHCSCCEEEECHHHHHHH
T ss_pred EEEEEEEECCeEEEEeCCCcchHHHHHHHHH--HhcCcccCCEEEeCcCCcchhhhHHHHHHHcCCCCEEEeCHHHHHHH
Confidence 4899999999999999995211100 11111 12467789999999999999999999998887789999999888766
Q ss_pred HHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeC-C-CCCCcEEEEEEECCEEEEEEcCCC
Q psy8348 92 RWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNA-G-HVLGAAMFLIEIAGVKILYTGDFS 169 (622)
Q Consensus 92 ~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~a-G-H~~Gs~~~~I~~~~~~IlytGD~~ 169 (622)
+.... ...+..++.++.+++++.+++++++ | |++|+.+++. + +++||||+-
T Consensus 130 ~~~~~-----------------------~~~~~~v~dGd~l~lG~~~L~~i~tPg~H~p~~~~~y~--~--~iLFsgD~f 182 (410)
T 4dik_A 130 EGFYG-----------------------IKDVTVVKDGEEREIGGKKFKFVMTPWLHWPDTMVTYL--D--GILFSCDVG 182 (410)
T ss_dssp HHHHC-----------------------CCCEEECCTTCEEEETTEEEEEEECTTSSSTTCEEEEE--T--TEEEEETTT
T ss_pred HhhcC-----------------------ccceeEecCCCEEeecceEEEEecCCCCCCCCCeeEEe--C--CceEccccc
Confidence 43311 0245678899999999998888754 5 9999988874 2 699999975
No 33
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.48 E-value=1.5e-14 Score=142.72 Aligned_cols=145 Identities=19% Similarity=0.215 Sum_probs=92.5
Q ss_pred CCCCcEEEEEECCeEEEEeCCCCCCCCCC-CCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhH
Q psy8348 10 EVGRSCIMLEFKNKSIMMDCGIHPGLSGM-DALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATK 88 (622)
Q Consensus 10 evG~sc~lI~~~~~~ILiD~G~~~~~~~~-~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~ 88 (622)
..+.|||+|+.++..+|||||.......+ ..+.. ..+++.+|++|++||.|.||+||++.+. +.+||+++..
T Consensus 32 ~~~~n~~li~~~~~~iLID~G~~~~~~~l~~~l~~-~g~~~~~i~~ViiTH~H~DH~gg~~~~~-----~~~v~~~~~~- 104 (221)
T 1ztc_A 32 AHFSTVVYLEHKDRRIIIDPGNLSSMDELEEKFSE-LGISPDDITDVLFTHVHLDHIFNSVLFE-----NATFYVHEVY- 104 (221)
T ss_dssp CCBCCEEEEEETTEEEEECCCCGGGHHHHHHHHHH-HTCCGGGCCEEECSCCCHHHHGGGGGCT-----TCEEEEEGGG-
T ss_pred CCceEEEEEEeCCeEEEEECCCCcchHHHHHHHHH-cCCCHHHCcEEEEcCCccccCCchhhCC-----CCEEEEeHHH-
Confidence 34679999999999999999963111011 01100 1245668999999999999999998763 5799998761
Q ss_pred HHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeCCCCCCcEEEEEEECC-EEEEEEcC
Q psy8348 89 AIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAG-VKILYTGD 167 (622)
Q Consensus 89 ~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~aGH~~Gs~~~~I~~~~-~~IlytGD 167 (622)
....+..+.. .....| ..+.....++..++.++.+..+++++...| ||++|+++|+++.++ .+++|+||
T Consensus 105 --~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~g~~l~~~~~~v~~~p-GHt~g~~~~~~~~~~~~~vlftGD 174 (221)
T 1ztc_A 105 --KTKNYLSFGT-----IVGRIY--SKVISSWKNVVLLKGEESLFDEKVKVFHTP-WHAREHLSFLLDTENAGRVLITGD 174 (221)
T ss_dssp --GGSCGGGGCH-----HHHHHH--HHHHHTCCSEEEECSCCEETTTTEEEEECC-SSSTTCEEEEEEETTTEEEEECGG
T ss_pred --hhhhhhhhcc-----chhhhh--hhccccccceEEeCCCCEEECCeEEEEEcC-CCCcccEEEEEEcCCCCeEEEEeC
Confidence 1100000000 000000 001111134566777776653368877765 999999999999877 89999999
Q ss_pred CCCC
Q psy8348 168 FSRQ 171 (622)
Q Consensus 168 ~~~~ 171 (622)
+...
T Consensus 175 ~~~~ 178 (221)
T 1ztc_A 175 ITPN 178 (221)
T ss_dssp GSCS
T ss_pred cccc
Confidence 8753
No 34
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=99.46 E-value=3.1e-14 Score=146.52 Aligned_cols=148 Identities=15% Similarity=0.202 Sum_probs=98.3
Q ss_pred CCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCC--CCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhH
Q psy8348 11 VGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVD--LVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATK 88 (622)
Q Consensus 11 vG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~--~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~ 88 (622)
.+.||++|+.++..||||||.......+ ...+. .+.+.+||+|++||.|.||+||++.+.++ ++.+||++..+.
T Consensus 56 ~~~~~~li~~~~~~iLiD~G~~~~~~~~--~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~--~~~~v~~~~~~~ 131 (303)
T 4ax1_B 56 CGISALLVTSDAGHILVDAATPQAGPQI--LANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKA--TGAPVYARAPAI 131 (303)
T ss_dssp SSSCCEEECCTTCEEEECCBSTTCHHHH--HHHHHHTTCCGGGEEEEECSCSSHHHHTTHHHHHHH--HCCCEEEEHHHH
T ss_pred CCceEEEEEeCCcEEEEECCCcccHHHH--HHHHHHcCCCHHHCcEEEcCCCCccccCCHHHHHhh--cCCEEEEcHHHH
Confidence 4679999999999999999963211111 11111 23455799999999999999999998776 468999999888
Q ss_pred HHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEe-CCCCCCcEEEEEEECC---EEEEE
Q psy8348 89 AIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYN-AGHVLGAAMFLIEIAG---VKILY 164 (622)
Q Consensus 89 ~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~-aGH~~Gs~~~~I~~~~---~~Ily 164 (622)
..++..... .....|..............+..++.++++|.++++++ +||++|+++|+++..+ .+.++
T Consensus 132 ~~l~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~pgHt~g~~~~~~~~~~~~~~~~~l 203 (303)
T 4ax1_B 132 DTLKRGLPD--------RTDPNFEVAEPVAPVANIVTLADDGVVSVGPLALTAVASPGHTPGGTSWTWRSCEGDDCRQMV 203 (303)
T ss_dssp HHHHHTSCC--------TTSTTGGGCCCCCCCSCEEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEE
T ss_pred HHHhccccC--------ccccccccccCcCCCCCcEEeCCCCEEEECCeEEEEEeCCCCCccceEEEEEecCCCceeEEE
Confidence 766432100 00001100000001124567888999999999888875 6899999999987531 22355
Q ss_pred EcCCCC
Q psy8348 165 TGDFSR 170 (622)
Q Consensus 165 tGD~~~ 170 (622)
+||.-.
T Consensus 204 ~gD~l~ 209 (303)
T 4ax1_B 204 YADSLT 209 (303)
T ss_dssp ECCCCC
T ss_pred EeCCcc
Confidence 598754
No 35
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.45 E-value=2.8e-14 Score=140.73 Aligned_cols=132 Identities=16% Similarity=0.199 Sum_probs=95.2
Q ss_pred CCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHH
Q psy8348 10 EVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKA 89 (622)
Q Consensus 10 evG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~ 89 (622)
..+.||++|+.++..+|||||..+... ...+..+......+|++|++||.|.||+||++.+.. .+.+||+++.+.+
T Consensus 24 ~~~~n~~li~~~~~~iLiD~G~~~~~~-~~~~~~l~~~~g~~i~~vi~TH~H~DH~gg~~~~~~---~~~~v~~~~~~~~ 99 (223)
T 1m2x_A 24 KYAANAVYLVTDKGVVVIDCPWGEDKF-KSFTDEIYKKHGKKVIMNIATHSHDDRAGGLEYFGK---IGAKTYSTKMTDS 99 (223)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSGGGH-HHHHHHHHHHHCCCEEEEECSSSSTTTTTTHHHHHH---TTCEEEEEHHHHH
T ss_pred cccccEEEEEeCCEEEEEeCCCChhHH-HHHHHHHHHHhCCCeEEEEeccCCccccCchhhHhh---CCCeEEEcHHHHH
Confidence 356899999999999999999632110 000111111101479999999999999999999765 4689999998876
Q ss_pred HHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEE--eCCCCCCcEEEEEEECCEEEEEEcC
Q psy8348 90 IYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAY--NAGHVLGAAMFLIEIAGVKILYTGD 167 (622)
Q Consensus 90 i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~--~aGH~~Gs~~~~I~~~~~~IlytGD 167 (622)
.++... +. .....+..++.+++++.+++++ .+||++|+++++++ +.+++|+||
T Consensus 100 ~~~~~~---------------~~--------~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~~~~~~~~~--~~~~lf~GD 154 (223)
T 1m2x_A 100 ILAKEN---------------KP--------RAQYTFDNNKSFKVGKSEFQVYYPGKGHTADNVVVWFP--KEKVLVGGC 154 (223)
T ss_dssp HHHHTT---------------CC--------CCSEEESSCEEEEETTEEEEEECCCSSSSSSCCEEEET--TTTEEEEET
T ss_pred HHHhcC---------------cc--------CCceecCCCceEEECCEEEEEEecCCCCCCCCEEEEEC--CCCEEEEec
Confidence 543210 00 0124567788899999999998 47999999999874 668999999
Q ss_pred CCC
Q psy8348 168 FSR 170 (622)
Q Consensus 168 ~~~ 170 (622)
+-.
T Consensus 155 ~~~ 157 (223)
T 1m2x_A 155 IIK 157 (223)
T ss_dssp TSC
T ss_pred ccc
Confidence 654
No 36
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.45 E-value=1.1e-13 Score=140.45 Aligned_cols=145 Identities=19% Similarity=0.249 Sum_probs=95.2
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCC--CCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHH
Q psy8348 12 GRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVD--LVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKA 89 (622)
Q Consensus 12 G~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~--~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~ 89 (622)
+.||++|+.++..+|||||.......+ ...+. ++++.+|++||+||.|.||+||++.+.+. ++.+||++..+..
T Consensus 37 ~~~~~li~~~~~~iLID~G~~~~~~~l--~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~--~~~~v~~~~~~~~ 112 (269)
T 1sml_A 37 DLTALLVQTPDGAVLLDGGMPQMASHL--LDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRR--TGAKVAANAESAV 112 (269)
T ss_dssp TBCCEEEEETTEEEEECCBSGGGHHHH--HHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHH--SSCEEEECHHHHH
T ss_pred CcEEEEEEeCCceEEEECCCCccHHHH--HHHHHHcCCChHHCcEEEeCCCCccccCCHHHHHHh--cCCeEEECHHHHH
Confidence 568999999999999999963111000 11111 23456899999999999999999998776 4689999988876
Q ss_pred HHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEe-CCCCCCcEEEEEEE--CCE-EEEEE
Q psy8348 90 IYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYN-AGHVLGAAMFLIEI--AGV-KILYT 165 (622)
Q Consensus 90 i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~-aGH~~Gs~~~~I~~--~~~-~Ilyt 165 (622)
.++........ .. ....+. .......+..++.++++|+++++++ +||++|+++|+++. .+. +.+++
T Consensus 113 ~l~~~~~~~~~---~~-~~~~~~------~~~~~~~~~~g~~~~~g~~~i~~~~~pGHt~g~~~~~~~~~~~~~~~~l~~ 182 (269)
T 1sml_A 113 LLARGGSDDLH---FG-DGITYP------PANADRIVMDGEVITVGGIVFTAHFMAGHTPGSTAWTWTDTRNGKPVRIAY 182 (269)
T ss_dssp HHHTTTCSBTT---TB-TSSCCC------CCCCSEECCTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEE
T ss_pred HHhcCCccccc---cc-cccCCC------CCCCCeEeCCCCEEEECCEEEEEEECCCCCcccEEEEEecccCCceeEEEE
Confidence 55321100000 00 000000 0012356778889999999998875 48999999999875 232 35556
Q ss_pred cCCCC
Q psy8348 166 GDFSR 170 (622)
Q Consensus 166 GD~~~ 170 (622)
||.-.
T Consensus 183 gD~l~ 187 (269)
T 1sml_A 183 ADSLS 187 (269)
T ss_dssp CCCCC
T ss_pred ecccc
Confidence 99754
No 37
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.44 E-value=3.6e-15 Score=149.12 Aligned_cols=145 Identities=12% Similarity=0.118 Sum_probs=96.4
Q ss_pred cCCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEec
Q psy8348 5 KGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMT 84 (622)
Q Consensus 5 LG~g~evG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t 84 (622)
+++.+..+.|||+|+.++..+|||||..+... ......+......+|++|++||.|.||+||++.+.+. +.+||++
T Consensus 40 ~~~~g~~~~n~~li~~~~~~iLID~G~~~~~~-~~l~~~l~~~~~~~i~~vi~TH~H~DH~gg~~~l~~~---~~~v~~~ 115 (243)
T 4hl2_A 40 MPGFGAVASNGLIVRDGGRVLVVDTAWTDDQT-AQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAA---GIATYAN 115 (243)
T ss_dssp ETTTEEEEEEEEEEEETTEEEEESCCSSHHHH-HHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHT---TCEEEEE
T ss_pred cCCCCcccceEEEEEECCcEEEEECCCCCccH-HHHHHHHHHhhCCCeeEEEECCCCccccCCHHHHHhC---CCeEEEC
Confidence 34445577899999999999999999632110 0001111111123699999999999999999998663 6899999
Q ss_pred hhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeCCCCCCcEEEEEEECCEEEEE
Q psy8348 85 HATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKILY 164 (622)
Q Consensus 85 ~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~aGH~~Gs~~~~I~~~~~~Ily 164 (622)
+.+...++... .......+. ......+..++.++++|+++....+||++|+++++++ +.+++|
T Consensus 116 ~~~~~~~~~~~--------~~~~~~~~~-------~~~~~~~~~g~~~~~g~~~v~~~~pGHt~g~~~~~~~--~~~~lf 178 (243)
T 4hl2_A 116 ALSNQLAPQEG--------MVAAQHSLT-------FAANGWVEPATAPNFGPLKVFYPGPGHTSDNITVGID--GTDIAF 178 (243)
T ss_dssp HHHHHHGGGTT--------CCCCSEEEC-------BCTTSBBCGGGSTTCTTEEEECCCSSSSTTCCEEEET--TTTEEE
T ss_pred HHHHHHHhccc--------ccccccccc-------cccceEecCCCeEEECCEEEEeCCCCCCcCCEEEEEc--CCCEEE
Confidence 88876542110 000000000 0112345567777889999954578999999999885 667999
Q ss_pred EcCCCC
Q psy8348 165 TGDFSR 170 (622)
Q Consensus 165 tGD~~~ 170 (622)
+||+-.
T Consensus 179 ~GD~~~ 184 (243)
T 4hl2_A 179 GGCLIK 184 (243)
T ss_dssp CTTTCC
T ss_pred Ecceee
Confidence 999865
No 38
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.43 E-value=2.2e-13 Score=152.51 Aligned_cols=224 Identities=15% Similarity=0.173 Sum_probs=128.3
Q ss_pred cEecCCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCC---------------------CCCCCCCCCCCCCccEEEcCCC
Q psy8348 2 KTLKGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGM---------------------DALPFVDLVESDQIDLLLISHF 60 (622)
Q Consensus 2 v~~LG~g~evG~sc~lI~~~~~~ILiD~G~~~~~~~~---------------------~~lp~~~~~~~~~Id~IlITH~ 60 (622)
|++|..|. ..++|++|+.++..||||||.....+.- ..+|.+......+||+|||||.
T Consensus 8 I~~ldvG~-gqg~~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~id~vilTH~ 86 (547)
T 2bib_A 8 IHFINVQE-GGSDAIILESNGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSVQKLDFILVTHT 86 (547)
T ss_dssp EEEECBSS-SBCCEEEEEETTEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTCCCBSCEECCCS
T ss_pred EEEEEcCC-CCceEEEEEeCCeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHhcCcccccEEEEcCC
Confidence 45555442 2368999999999999999975221100 0112222335568999999999
Q ss_pred chhhhcchHHHHHhcCCCCeEEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhh--cccE----EecCCCeEEe
Q psy8348 61 HLDHCGALPWFLLKTGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSM--DKIE----TINFHEEKDV 134 (622)
Q Consensus 61 H~DHiggLp~l~~~~~~~~~Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~--~~i~----~i~~~~~~~i 134 (622)
|.||+||++.+++... ..+||+++.+...+..... .....+....+...+ ..+. .+..++.+++
T Consensus 87 H~DHiggl~~l~~~~~-~~~i~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~ 156 (547)
T 2bib_A 87 HSDHIGNVDELLSTYP-VDRVYLKKYSDSRITNSER---------LWDNLYGYDKVLQTATETGVSVIQNITQGDAHFQF 156 (547)
T ss_dssp CHHHHTTHHHHHHHSC-BSEEECCCCCGGGBSCGGG---------CTTHHHHHHHHHHHHHHTTCEEECSCCTTTTEEEE
T ss_pred CccccCCHHHHHHhCC-ccEEEECcccccccCChHH---------HHhHHHHHHHHHHHHHHhCCeEEEeecCCCceEec
Confidence 9999999999987642 2368988765432110000 000000000010000 0111 2355678899
Q ss_pred CCEEEEEEeC---CC-----------CCCcEEEEEEECCEEEEEEcCCCCCccccccccCCCCCCCcEEEEcccCCCCCC
Q psy8348 135 NGIKFSAYNA---GH-----------VLGAAMFLIEIAGVKILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGTHVH 200 (622)
Q Consensus 135 ~gi~v~~~~a---GH-----------~~Gs~~~~I~~~~~~IlytGD~~~~~~~~l~~a~~~~~~~DvLI~EsTyg~~~~ 200 (622)
++++|+++++ .| ..+|++++++.++.++|||||+....+........ ..++|+|++. .|
T Consensus 157 g~~~i~~l~~~~~~h~~~~~~~~~~~n~~S~vl~i~~~~~~iLftGD~~~~~~~e~~l~~~-~~~~DvLkv~------HH 229 (547)
T 2bib_A 157 GDMDIQLYNYENETDSSGELKKIWDDNSNSLISVVKVNGKKIYLGGDLDNVHGAEDKYGPL-IGKVDLMKFN------HH 229 (547)
T ss_dssp TTEEEEEESCSCCBCTTSCBCCBSSGGGGCCEEEEEETTEEEEECTTCCSTTSHHHHHHHH-HCCCSEEECT------TT
T ss_pred CCeeEEEecCccccCccccccccCCCCCCcEEEEEEECCEEEEecCCccchhhhhhhhccc-ccceeEEEec------cc
Confidence 9999999963 23 24789999999999999999998753211110111 1379999863 12
Q ss_pred c-hhhhHHHHHHHHHHHHHHcCCeEEEeecccch-------HHHHHHHHHHHHHhCCCCCCccEEEE
Q psy8348 201 E-QREEREGRFTSLIHDIVNRGGRCLIPVFALGR-------AQELLLILDEYWSLHPELHDIPIYYA 259 (622)
Q Consensus 201 ~-~~~~~~~~~~~~i~~~l~~gg~vliP~falGR-------~qEll~iL~~~~~~~~~l~~ipI~~~ 259 (622)
- ++.....+|.+.++ -..++ ++.|+ .+|.+..|++. ++++|..
T Consensus 230 G~S~~s~s~~fl~~v~-----P~~ai---iS~g~~n~~~hP~~evl~~l~~~--------g~~v~~T 280 (547)
T 2bib_A 230 HDTNKSNTKDFIKNLS-----PSLIV---QTSDSLPWKNGVDSEYVNWLKER--------GIERINA 280 (547)
T ss_dssp TBCSSSSCHHHHHHHC-----CSEEE---ESBSSCSBSSSBCHHHHHHHHTT--------TCEEEEC
T ss_pred cCcccCChHHHHHhcC-----CcEEE---EcCCcccccCCCCHHHHHHHHhC--------CceEEEe
Confidence 1 22122235555442 22333 34444 57777776643 5777764
No 39
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.43 E-value=1.2e-13 Score=134.58 Aligned_cols=145 Identities=14% Similarity=0.160 Sum_probs=93.8
Q ss_pred EecCCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEE
Q psy8348 3 TLKGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCF 82 (622)
Q Consensus 3 ~~LG~g~evG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy 82 (622)
+.+..+ ..+.|||+|+.++..+|||||... ..+ ...+.... .+|++|++||.|.||+||++.+.... +++||
T Consensus 4 ~~~~~g-~~~~n~~li~~~~~~iliD~G~~~--~~l--~~~l~~~g-~~i~~vilTH~H~DH~gg~~~l~~~~--~~~v~ 75 (207)
T 2zwr_A 4 FPVTLG-PLQENAYLVETGEGPVLIDPGDEP--EKL--LALFQTTG-LIPLAILLTHAHFDHVGAVAPLVEAL--DLPVY 75 (207)
T ss_dssp EEEEET-TTTEEEEEEEETTEEEEECCCSCH--HHH--HHHHHHHT-CCCSCEECSCCCGGGTTTHHHHHHHH--CCCEE
T ss_pred EEEecC-CcccEEEEEEeCCcEEEEeCCCCH--HHH--HHHHHHcC-CcccEEEECCCChHHHccHHHHHHHh--CCcEE
Confidence 344433 468899999999999999999521 100 01111111 25899999999999999999987663 68999
Q ss_pred echhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeCCCCCCcEEEEEEECCEEE
Q psy8348 83 MTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKI 162 (622)
Q Consensus 83 ~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~aGH~~Gs~~~~I~~~~~~I 162 (622)
+++.+.+.++...... .. .+.....+. .....+..++.+. ++++... +||++|+++++++ +.++
T Consensus 76 ~~~~~~~~~~~~~~~~-~~--~g~~~~~~~--------~~~~~~~~g~~i~--~~~~~~~-pGHt~g~~~~~~~--~~~~ 139 (207)
T 2zwr_A 76 LHPLDLPLYEGADLAA-RA--WGLAIPKPP--------LPVRPLEEGMRLF--GFQVLHL-PGHSPGHVAFYDP--EGAQ 139 (207)
T ss_dssp ECGGGHHHHHTHHHHH-HH--TTCCCCCCC--------SCCEECCTTCEET--TEEEEEC-CSSSTTCEEEEET--TTTE
T ss_pred ECHHHHHHHhCchhhh-hh--cCCCCCcCC--------CCceEeCCCCEEE--EEEEEeC-CCCCCCcEEEEEC--CCCE
Confidence 9999987665322111 00 000000000 0224455666554 6666554 6899999999875 6789
Q ss_pred EEEcCCCCC
Q psy8348 163 LYTGDFSRQ 171 (622)
Q Consensus 163 lytGD~~~~ 171 (622)
+|+||+...
T Consensus 140 lf~GD~~~~ 148 (207)
T 2zwr_A 140 VFSGDLLFR 148 (207)
T ss_dssp EEEETSEET
T ss_pred EEEecccCC
Confidence 999998643
No 40
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.42 E-value=9.1e-14 Score=145.75 Aligned_cols=155 Identities=18% Similarity=0.217 Sum_probs=95.1
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCC-CCCC-CCC--CCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhh
Q psy8348 12 GRSCIMLEFKNKSIMMDCGIHPGLSG-MDAL-PFV--DLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHAT 87 (622)
Q Consensus 12 G~sc~lI~~~~~~ILiD~G~~~~~~~-~~~l-p~~--~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t 87 (622)
+.||++|+.+++.||||||....... ...+ ..+ .++++.+||+|++||.|.||+||+..+......+.+||+++.+
T Consensus 96 ~~n~~LI~~~~~~iLIDtG~~~~~~~~~~~l~~~L~~~Gi~~~~Id~VilTH~H~DHiggl~~~~~~~fp~a~v~~~~~~ 175 (331)
T 1p9e_A 96 SVTGYLVNTGSKLVLVDTGAAGLFGPTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMVGEQLAFPNAVVRADQKE 175 (331)
T ss_dssp EEEEEEEECSSCEEEECCCCTTSSCTTCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEETTEESSTTCEEECBHHH
T ss_pred EEEEEEEEECCEEEEEECCCCCcCCcchhHHHHHHHHcCCCHHHCCEEEeCCcccccCCcccccccccCCCCEEEECHHH
Confidence 35799999999999999997431110 0000 011 1245678999999999999999998432222236899999888
Q ss_pred HHHHHHHHHhHHhhhcccc-c-ccCCC--HHHHHHh--hcccEEecCCCeEEeCCEEEEEEeCCCCCCcEEEEEEECCEE
Q psy8348 88 KAIYRWLLSDYIKVSNIST-E-QMLYT--ESDLEKS--MDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVK 161 (622)
Q Consensus 88 ~~i~~~~l~d~~~~~~~~~-~-~~ly~--~~di~~~--~~~i~~i~~~~~~~i~gi~v~~~~aGH~~Gs~~~~I~~~~~~ 161 (622)
.+.+.... ....... . ...|. .+.+... ..++..++.++.+. .|+++... +||++|+++|+++.++.+
T Consensus 176 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~-~gi~vi~t-pGHtpG~~~~~i~~~~~~ 249 (331)
T 1p9e_A 176 ADFWLSQT----NLDKAPDDESKGFFKGAMASLNPYVKAGKFKPFSGNTDLV-PGIKALAS-HGHTPGHTTYVVESQGQK 249 (331)
T ss_dssp HHHHSCHH----HHTTCSSTTSCHHHHHHHHHHHHHHHTTCBCCBCSSEECS-TTEEEEEC-TTSSTTCEEEEEEETTEE
T ss_pred HHHHhCch----hhccCchhhhhHHHHHHHHHhhhhcccCceEEeCCCCEEc-ccEEEEEc-CCCChhCEEEEEEECCcE
Confidence 76542110 0000000 0 00000 0111111 12344555555443 36776654 699999999999999999
Q ss_pred EEEEcCCCCCc
Q psy8348 162 ILYTGDFSRQE 172 (622)
Q Consensus 162 IlytGD~~~~~ 172 (622)
++|+||+....
T Consensus 250 vlf~GD~~~~~ 260 (331)
T 1p9e_A 250 LALLGDLILVA 260 (331)
T ss_dssp EEECTTSCCCH
T ss_pred EEEEECccCcc
Confidence 99999998654
No 41
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.42 E-value=8e-14 Score=149.67 Aligned_cols=132 Identities=19% Similarity=0.258 Sum_probs=97.0
Q ss_pred CCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCC-CCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHH
Q psy8348 11 VGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDL-VESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKA 89 (622)
Q Consensus 11 vG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~-~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~ 89 (622)
.+.|||+|+ +++.+|||||.......+ ++.+.. ++..+||+|++||.|.||+||++.+.++. .+.+||+++.+..
T Consensus 33 ~~~n~~li~-~~~~iliD~G~~~~~~~~--~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~-~~~~v~~~~~~~~ 108 (402)
T 1e5d_A 33 TTYNAYLVE-DEKTTLFDTVKAEYKGEL--LCGIASVIDPKKIDYLVIQHLELDHAGALPALIEAC-QPEKIFTSSLGQK 108 (402)
T ss_dssp EEEEEEEEC-SSSCEEECCCCGGGHHHH--HHHHHTTSCGGGCCEEEECCCSHHHHTTHHHHHHHH-CCSEEEEEHHHHH
T ss_pred cceEEEEEE-CCCEEEEeCCCCccHHHH--HHHHHHhCCcccCCEEEeCCCCccccccHHHHHHHC-CCCEEEEChHHHH
Confidence 456899999 678999999963111000 111111 35678999999999999999999987764 3689999999887
Q ss_pred HHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeC--CCCCCcEEEEEEECCEEEEEEcC
Q psy8348 90 IYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNA--GHVLGAAMFLIEIAGVKILYTGD 167 (622)
Q Consensus 90 i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~a--GH~~Gs~~~~I~~~~~~IlytGD 167 (622)
.++..+. +. ......+..++.+++++.+++++++ ||++|++++++ ++.+++|+||
T Consensus 109 ~~~~~~~--------------~~-------~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~~~~~~~~--~~~~~l~~GD 165 (402)
T 1e5d_A 109 AMESHFH--------------YK-------DWPVQVVKHGETLSLGKRTVTFYETRMLHWPDSMVSWF--ADEKVLISND 165 (402)
T ss_dssp HHHHHHC--------------CS-------SCCEEEECTTCEEECSSCEEEEEECTTSSSTTCEEEEE--TTTTEEEEET
T ss_pred HHHHHhC--------------CC-------CCceEEcCCCCEEEECCCEEEEEeCCCCCCCCcEEEEE--CCCCEEEecc
Confidence 6543211 00 0245678889999999988888865 79999999876 5678999999
Q ss_pred CC
Q psy8348 168 FS 169 (622)
Q Consensus 168 ~~ 169 (622)
+.
T Consensus 166 ~~ 167 (402)
T 1e5d_A 166 IF 167 (402)
T ss_dssp TT
T ss_pred cc
Confidence 84
No 42
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=99.42 E-value=4.9e-14 Score=138.89 Aligned_cols=152 Identities=11% Similarity=0.152 Sum_probs=93.7
Q ss_pred ecCCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEe
Q psy8348 4 LKGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFM 83 (622)
Q Consensus 4 ~LG~g~evG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~ 83 (622)
.++++...+.||++|+.++..+|||||..+... ......+..+...+|++|++||.|.||+||++.+.+ ++++||+
T Consensus 14 ~~~~~~~~~~n~~li~~~~~~iLiD~G~~~~~~-~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~---~~~~v~~ 89 (227)
T 3iog_A 14 VVEDNYYVQENSMVYFGAKGVTVVGATWTPDTA-RELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWKS---IGAKVVS 89 (227)
T ss_dssp EEEECSSSCEEEEEEECSSCEEEESCCSSHHHH-HHHHHHHHTTCCSCEEEEECSSSSHHHHTTHHHHHH---TTCEEEE
T ss_pred EEECCCcccCcEEEEEeCCeEEEEECCCChHHH-HHHHHHHHHhcCCCeEEEEeCCCchhhcChHHHHhh---CCCeEEE
Confidence 344444567899999999999999999632110 000111122356789999999999999999999754 6789999
Q ss_pred chhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEE--eCCCCCCcEEEEEEECCEE
Q psy8348 84 THATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAY--NAGHVLGAAMFLIEIAGVK 161 (622)
Q Consensus 84 t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~--~aGH~~Gs~~~~I~~~~~~ 161 (622)
++.+...++............... .+.. .... ...... ...+++++.+++.+ ++||++|+++++++ +.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~-~~~~~~--~~~~~l~~~~~~~~~~~pGHt~g~~~~~~~--~~~ 160 (227)
T 3iog_A 90 TRQTRDLMKSDWAEIVAFTRKGLP--EYPD--LPLV-LPNVVH--DGDFTLQEGKVRAFYAGPAHTPDGIFVYFP--DEQ 160 (227)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHCT--TSCC--CCCC-CCSEEE--SSCEEETTTTEEEECCCCSSSSSCCEEEET--TTT
T ss_pred CHHHHHHHHHhhHHHHHHhhcCCC--CCCC--cccc-CCCEee--cCeEEEcCcEEEEEecCCCCCCCcEEEEec--CCC
Confidence 999988776543332211110000 0000 0000 001111 23467765455555 47999999999875 567
Q ss_pred EEEEcCCC
Q psy8348 162 ILYTGDFS 169 (622)
Q Consensus 162 IlytGD~~ 169 (622)
++| ||.-
T Consensus 161 ~lf-gd~l 167 (227)
T 3iog_A 161 VLY-GGCI 167 (227)
T ss_dssp EEE-CGGG
T ss_pred EEE-cccc
Confidence 999 7754
No 43
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=99.42 E-value=5.3e-14 Score=139.12 Aligned_cols=131 Identities=15% Similarity=0.237 Sum_probs=93.1
Q ss_pred CCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHHH
Q psy8348 11 VGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKAI 90 (622)
Q Consensus 11 vG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~i 90 (622)
.+.||++|+.++..+|||||..... ....+..+......+|++|++||.|.||+||++.+.++ +.+||+++.+...
T Consensus 39 ~~~n~~li~~~~~~iliD~G~~~~~-~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~---~~~v~~~~~~~~~ 114 (227)
T 1mqo_A 39 VPSNGLVLNTSKGLVLVDSSWDDKL-TKELIEMVEKKFQKRVTDVIITHAHADRIGGIKTLKER---GIKAHSTALTAEL 114 (227)
T ss_dssp EEEEEEEEEETTEEEEESCCSSHHH-HHHHHHHHHHHHTSCEEEEECCCCSHHHHTTHHHHHHH---TCEEECBHHHHHH
T ss_pred ecceEEEEEeCCeEEEEECCCChHH-HHHHHHHHHHhcCCCceEEEeCCCCchhccchHHHhhC---CcEEEeccchHHH
Confidence 4579999999999999999963210 00001111111146899999999999999999998765 5799999888765
Q ss_pred HHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEE--eCCCCCCcEEEEEEECCEEEEEEcCC
Q psy8348 91 YRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAY--NAGHVLGAAMFLIEIAGVKILYTGDF 168 (622)
Q Consensus 91 ~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~--~aGH~~Gs~~~~I~~~~~~IlytGD~ 168 (622)
++.. . +. .....+..++.+++++.+++++ .+||++|+++++++ +.+++|+||+
T Consensus 115 ~~~~--------~-------~~--------~~~~~~~~~~~~~~g~~~i~~~~~~pgHt~g~~~~~~~--~~~~lf~GD~ 169 (227)
T 1mqo_A 115 AKKN--------G-------YE--------EPLGDLQTVTNLKFGNMKVETFYPGKGHTEDNIVVWLP--QYNILVGGCL 169 (227)
T ss_dssp HHHT--------T-------CC--------CCCCCBCSEEEEEETTEEEEEECCCCSSSSSCCEEEET--TTTEEEEETT
T ss_pred HHhc--------C-------CC--------CCccccCCCCeeeECCEEEEEEecCCCCCCCCEEEEEC--CCCEEEEeee
Confidence 4311 0 10 0123345567788899999886 47999999999874 6689999998
Q ss_pred CC
Q psy8348 169 SR 170 (622)
Q Consensus 169 ~~ 170 (622)
-.
T Consensus 170 ~~ 171 (227)
T 1mqo_A 170 VK 171 (227)
T ss_dssp SC
T ss_pred ee
Confidence 64
No 44
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=99.42 E-value=2.3e-13 Score=141.35 Aligned_cols=150 Identities=17% Similarity=0.173 Sum_probs=98.5
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCC-CCC--CCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhH
Q psy8348 12 GRSCIMLEFKNKSIMMDCGIHPGLSGMDAL-PFV--DLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATK 88 (622)
Q Consensus 12 G~sc~lI~~~~~~ILiD~G~~~~~~~~~~l-p~~--~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~ 88 (622)
+.|||+|+.++..+|||||..... ....+ ..+ .++++.+|++|++||.|.||+||++.+.++ +++||+++.+.
T Consensus 21 ~~n~~li~~~~~~ilID~G~~~~~-~~~~l~~~l~~~g~~~~~i~~Vi~TH~H~DH~gg~~~l~~~---~~~v~~~~~~~ 96 (317)
T 2zo4_A 21 TVNLYLLQGAGEVALVDTALGTRA-ARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEGL---GARVFLHEEEF 96 (317)
T ss_dssp EEEEEEEEETTEEEEECCCCSSHH-HHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHHT---TCEEEEEGGGT
T ss_pred cEEEEEEEcCCceEEEECCCCCHH-HHHHHHHHHHHcCCChhhcCEEEEcCCCCcccccHHHHHhC---CCEEEEcHHHH
Confidence 578999999989999999964210 00000 011 123456799999999999999999998764 68999999887
Q ss_pred HHHHHHHH----------hHHhhhcccccccCCCHHHHHH----------hhcccEEecCCCeEEeCCEEEEEEeC-CCC
Q psy8348 89 AIYRWLLS----------DYIKVSNISTEQMLYTESDLEK----------SMDKIETINFHEEKDVNGIKFSAYNA-GHV 147 (622)
Q Consensus 89 ~i~~~~l~----------d~~~~~~~~~~~~ly~~~di~~----------~~~~i~~i~~~~~~~i~gi~v~~~~a-GH~ 147 (622)
..++.... .......... . + ...+.. .......+..++.++++|.+++++++ ||+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~gg~~~~~i~tpGHt 172 (317)
T 2zo4_A 97 ARGHRFWREPEAFAEASWRLFLDHGTPE--G-A-LQGIRETVEKTRERVHPPQNPLPLRDGEALEVAGKRLRVLWTPGHA 172 (317)
T ss_dssp TTHHHHHHCTTTSHHHHHHHHHHTTCCC-----------CHHHHHHTTCCCCSSCEEECTTCEEEETTEEEEEEECCSSS
T ss_pred HHHHhhhhhhhhHHHHHHHHHHHcCCCH--H-H-HHHHHHhcccccccCCCCCCceEECCCCEEEeCCceEEEEECCCCC
Confidence 65543221 0110000000 0 0 000000 01234667888999999988888765 999
Q ss_pred CCcEEEEEEECCEEEEEEcCCCCC
Q psy8348 148 LGAAMFLIEIAGVKILYTGDFSRQ 171 (622)
Q Consensus 148 ~Gs~~~~I~~~~~~IlytGD~~~~ 171 (622)
+|+++|++ ++.+++|+||.-..
T Consensus 173 ~g~~~~~~--~~~~~lf~GD~~~~ 194 (317)
T 2zo4_A 173 DGHAAFYL--EEEGVLLAGDALLE 194 (317)
T ss_dssp TTCEEEEE--TTTTEEEEETSCCS
T ss_pred cccEEEEe--CCCCEEEECCEecC
Confidence 99999976 57789999998753
No 45
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.42 E-value=5.2e-14 Score=139.74 Aligned_cols=131 Identities=13% Similarity=0.192 Sum_probs=94.6
Q ss_pred CCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHHH
Q psy8348 11 VGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKAI 90 (622)
Q Consensus 11 vG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~i 90 (622)
.+.|||+|+.++..+|||||..... ....+..+......+|++|++||.|.||+||++.+.+ .+++||+++.+.+.
T Consensus 35 ~~~n~~li~~~~~~iLiD~G~~~~~-~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~---~~~~v~~~~~~~~~ 110 (232)
T 1a7t_A 35 VPSNGMIVINNHQAALLDTPINDAQ-TEMLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQR---KGVQSYANQMTIDL 110 (232)
T ss_dssp EEEEEEEEEETTEEEEESCCSSHHH-HHHHHHHHHHHHCCEEEEEECSSSSHHHHTTHHHHHH---TTCEEEEEHHHHHH
T ss_pred ccceEEEEEeCCEEEEEeCCCCHHH-HHHHHHHHHHhcCCCeEEEEeCCCCccccCCHHHHHh---CCCeEEEcHHHHHH
Confidence 4479999999999999999963110 0000111111113589999999999999999998765 46899999888765
Q ss_pred HHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEe--CCCCCCcEEEEEEECCEEEEEEcCC
Q psy8348 91 YRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYN--AGHVLGAAMFLIEIAGVKILYTGDF 168 (622)
Q Consensus 91 ~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~--aGH~~Gs~~~~I~~~~~~IlytGD~ 168 (622)
++.. . +. .....+..++.+.+++.+++++. +||++|+++++++ +.+++|+||+
T Consensus 111 ~~~~--------~-------~~--------~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~g~~~~~~~--~~~~lf~GD~ 165 (232)
T 1a7t_A 111 AKEK--------G-------LP--------VPEHGFTDSLTVSLDGMPLQCYYLGGGHATDNIVVWLP--TENILFGGCM 165 (232)
T ss_dssp HHHH--------T-------CC--------CCSEEESSEEEEEETTEEEEEECCCCSSSTTCCEEEET--TTTEEEEETT
T ss_pred HHhc--------C-------CC--------CCceecCCCCEEEECCeEEEEEeCCCCCCCCCEEEEEC--CCCEEEEcCc
Confidence 4321 0 00 12345677788899999999984 7999999999874 5689999998
Q ss_pred CC
Q psy8348 169 SR 170 (622)
Q Consensus 169 ~~ 170 (622)
-.
T Consensus 166 ~~ 167 (232)
T 1a7t_A 166 LK 167 (232)
T ss_dssp SC
T ss_pred cc
Confidence 75
No 46
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.41 E-value=7.7e-14 Score=141.82 Aligned_cols=150 Identities=19% Similarity=0.311 Sum_probs=93.1
Q ss_pred CCCCcEEEEEECCeEEEEeCCCCCCC----C--------CCCCC-CCC--CCCCCCCccEEEcCCCchhhhcchHHHHHh
Q psy8348 10 EVGRSCIMLEFKNKSIMMDCGIHPGL----S--------GMDAL-PFV--DLVESDQIDLLLISHFHLDHCGALPWFLLK 74 (622)
Q Consensus 10 evG~sc~lI~~~~~~ILiD~G~~~~~----~--------~~~~l-p~~--~~~~~~~Id~IlITH~H~DHiggLp~l~~~ 74 (622)
..+.|||+|+.++..||||||..... . ....+ ..+ .++++.+|++|++||+|.||+||++.|
T Consensus 32 ~~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~~--- 108 (274)
T 3aj3_A 32 RFPVYSILIEHAEGRFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALGLLGLEPRDIDVVVNSHFHFDHCGGNKYF--- 108 (274)
T ss_dssp EEEEEEEEEEETTEEEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHHHTTCCGGGCCEEECSCCSGGGTTTGGGC---
T ss_pred EeeEEEEEEEeCCccEEEECCCCcccccCccccCCcccCccccHHHHHHHcCCCHHHCCEEEecCcCcccCCchhhC---
Confidence 34569999999999999999974311 0 00000 011 124566899999999999999999886
Q ss_pred cCCCCeEEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHH--------------hhcccEEecCCCeEEeCC-EEE
Q psy8348 75 TGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEK--------------SMDKIETINFHEEKDVNG-IKF 139 (622)
Q Consensus 75 ~~~~~~Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~--------------~~~~i~~i~~~~~~~i~g-i~v 139 (622)
.+++||+++.+...+....... + .......|. ..... ...++..++ +.++++| +++
T Consensus 109 --~~a~v~~~~~~~~~~~~~~~~~-~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~g~~~v 179 (274)
T 3aj3_A 109 --PHAKKICHRSEVPQACNPQPFE-H---LGYSDLSFS-AEAAEARGATAQLLEGTTRANSTFEGID--GDVDLARGVKL 179 (274)
T ss_dssp --TTSEEEEETTHHHHHHSCCGGG-T---TTTCCCTTC-HHHHHHHTCGGGCCTTCCSTTSCEEEEC--SSEEEETTEEE
T ss_pred --CCCEEEECHHHHHHHhCcCCcc-c---cccChhhhc-cccccccccccccccccccCCCCceEcC--CccccCCEEEE
Confidence 4679999988876543211000 0 000000010 00000 011234443 3567777 766
Q ss_pred EEEeCCCCCCcEEEEEEEC-CEEEEEEcCCCCCc
Q psy8348 140 SAYNAGHVLGAAMFLIEIA-GVKILYTGDFSRQE 172 (622)
Q Consensus 140 ~~~~aGH~~Gs~~~~I~~~-~~~IlytGD~~~~~ 172 (622)
... +||++|+++++++.+ +.+++|+||+....
T Consensus 180 ~~~-pGHt~g~~~~~~~~~~~~~~lf~GD~~~~~ 212 (274)
T 3aj3_A 180 IST-PGHSIGHYSLLVEFPRRKPILFTIDAAYTQ 212 (274)
T ss_dssp EEC-TTSSTTCEEEEECCSSSCCEEEEETTCSSH
T ss_pred EEC-CCCCceeeEEEEECCCCCEEEEEechhhhH
Confidence 655 599999999999876 67999999987644
No 47
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=99.41 E-value=6.5e-14 Score=138.55 Aligned_cols=156 Identities=10% Similarity=0.136 Sum_probs=96.2
Q ss_pred ecCCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEe
Q psy8348 4 LKGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFM 83 (622)
Q Consensus 4 ~LG~g~evG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~ 83 (622)
.++++...+.||++|+.++..+|||||..+... ......+..+...+|++|++||.|.||+||++.+. + ++++||+
T Consensus 17 ~i~~~~~~~~n~~li~~~~~~iLiD~G~~~~~~-~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~-~--~~~~v~~ 92 (233)
T 3q6v_A 17 IVEDKEYVQENSMVYIGTDGITIIGATWTPETA-ETLYKEIRKVSPLPINEVINTNYHTDRAGGNAYWK-T--LGAKIVA 92 (233)
T ss_dssp EEEECSSSCEEEEEEECSSCEEEESCCSSHHHH-HHHHHHHHHHCCCCEEEEECSSSSHHHHTTHHHHH-H--TTCEEEE
T ss_pred EEeCCCcCCCcEEEEEeCCeEEEEECCCCHHHH-HHHHHHHHHhcCCCcEEEEECCCChhhhChHHHHh-h--CCCEEEE
Confidence 445555568899999999999999999743110 00001111224578999999999999999999986 3 5789999
Q ss_pred chhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeCCCCCCcEEEEEEECCEEEE
Q psy8348 84 THATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKIL 163 (622)
Q Consensus 84 t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~aGH~~Gs~~~~I~~~~~~Il 163 (622)
++.+.+.++............... .+.. . ........+..+..+..+++++...++||++|+++++++ ..+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~-~~~~~~~~~~~~~~l~~~~~~v~~~~pGHt~g~~~~~~~--~~~~l 165 (233)
T 3q6v_A 93 TQMTYDLQKSQWGSIVNFTRQGNN--KYPN--L-EKSLPDTVFPGDFNLQNGSIRAMYLGEAHTKDGIFVYFP--AERVL 165 (233)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHST--TCCC--C-CCCCCSEEESSCEEETTTTEEEECCCCSSSSSCCEEEET--TTTEE
T ss_pred cHHHHHHHHhhhHHHHHHHhcccc--cccc--c-cccCCCEEeCCCeEEcCceEEEEECCCCCCcCcEEEEec--cCCEE
Confidence 999988776543322211110000 0000 0 000011233333333334566666568999999998874 56799
Q ss_pred EEcCCCCC
Q psy8348 164 YTGDFSRQ 171 (622)
Q Consensus 164 ytGD~~~~ 171 (622)
| ||.-..
T Consensus 166 f-gD~~~~ 172 (233)
T 3q6v_A 166 Y-GNCILK 172 (233)
T ss_dssp E-CTTTSC
T ss_pred E-Cceecc
Confidence 9 997543
No 48
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.41 E-value=2e-13 Score=140.92 Aligned_cols=149 Identities=12% Similarity=0.169 Sum_probs=100.4
Q ss_pred CCCCcEEEEEE--CCeEEEEeCCCCCCCC-------CC-CCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCC
Q psy8348 10 EVGRSCIMLEF--KNKSIMMDCGIHPGLS-------GM-DALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKG 79 (622)
Q Consensus 10 evG~sc~lI~~--~~~~ILiD~G~~~~~~-------~~-~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~ 79 (622)
..+.+||+|.. +++.+|||||...... .. ..+..+.... .+|++||+||.|.||++|++.|.+++ ++
T Consensus 14 ~~~~~~yli~~~~~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g-~~i~~Il~TH~H~DH~gg~~~l~~~~--~a 90 (298)
T 4efz_A 14 ATCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALG-ARVRWLLETHVHADHLSAAPYLKTRV--GG 90 (298)
T ss_dssp TTCBEEEEEECTTTCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHT-CEEEEEECSSCCSSSBCCHHHHHHHH--CC
T ss_pred CcccEEEEEEECCCCeEEEEcCCCCccccccccCcccHHHHHHHHHHCC-CcceEEEECCCchhhhhhHHHHHHHh--CC
Confidence 45789999986 5789999999631100 00 0011111111 25999999999999999999988774 68
Q ss_pred eEEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEe-CCCCCCcEEEEEEEC
Q psy8348 80 RCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYN-AGHVLGAAMFLIEIA 158 (622)
Q Consensus 80 ~Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~-aGH~~Gs~~~~I~~~ 158 (622)
+||+++.+....+.+...+ . .. ..|.... ......+..++.+.+++.+++++. +||++|+++|++...
T Consensus 91 ~i~~~~~~~~~~~~~~~~~-~---~~---~~~~~~~----~~~~~~~~~g~~l~~g~~~i~vi~tPGHT~g~~~~~~~~~ 159 (298)
T 4efz_A 91 EIAIGRHVTRVQDVFGKLF-N---AG---PAFAHDG----SQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEA 159 (298)
T ss_dssp EEEEETTHHHHHHHHHHHT-T---CC---TTSCSSS----TTSSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEET
T ss_pred cEEEChhHHHHHHHHHHhc-C---Cc---ccccccc----cCCCEEeCCCCEEEECCEEEEEEECCCCCcccEEEEECCC
Confidence 9999998877654332111 1 00 0010000 011256788999999999888875 589999999999987
Q ss_pred CEE------EEEEcCCCCCc
Q psy8348 159 GVK------ILYTGDFSRQE 172 (622)
Q Consensus 159 ~~~------IlytGD~~~~~ 172 (622)
+++ ++||||+-...
T Consensus 160 ~~~~~~~~~~lftGD~l~~~ 179 (298)
T 4efz_A 160 HAAHDARDAAAFVGDTLFMP 179 (298)
T ss_dssp TCCGGGCBCEEECCSSBCCT
T ss_pred cccccCCceEEEEcCccccC
Confidence 655 99999986543
No 49
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.40 E-value=1.6e-13 Score=137.09 Aligned_cols=154 Identities=11% Similarity=0.151 Sum_probs=96.8
Q ss_pred cCCCCCCCCcEEEEEEC-CeEEEEeCCCCCCCCCCCCCCCCCC-CCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEE
Q psy8348 5 KGAGQEVGRSCIMLEFK-NKSIMMDCGIHPGLSGMDALPFVDL-VESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCF 82 (622)
Q Consensus 5 LG~g~evG~sc~lI~~~-~~~ILiD~G~~~~~~~~~~lp~~~~-~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy 82 (622)
+.+....+.|||+|+.+ +..+|||||..+... ......+.. ++...+ +|++||.|.||+||++.+.+ ++++||
T Consensus 22 i~~~~~~~~n~~li~~~~~~~iLiD~G~~~~~~-~~l~~~l~~~~~~~~~-~vi~TH~H~DH~gg~~~l~~---~~~~v~ 96 (246)
T 2fhx_A 22 VTDRDFYSSNVLVAKMLDGTVVIVSSPFENLGT-QTLMDWVAKTMKPKKV-VAINTHFHLDGTGGNEIYKK---MGAETW 96 (246)
T ss_dssp EEETTTTTEEEEEEECTTSEEEEESCCSSHHHH-HHHHHHHHHHHCCSEE-EEECCSSSHHHHTTHHHHHH---TTCEEE
T ss_pred EECcCCCCCCEEEEEeCCCeEEEEeCCCCHHHH-HHHHHHHHHhcCCCcE-EEEeCCCCccccChHHHHhh---cCCEEE
Confidence 34444457899999876 479999999632100 000111111 233445 79999999999999998764 478999
Q ss_pred echhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhh--------cccEEecCCCeEEeCCEEEEEEe--CCCCCCcEE
Q psy8348 83 MTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSM--------DKIETINFHEEKDVNGIKFSAYN--AGHVLGAAM 152 (622)
Q Consensus 83 ~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~--------~~i~~i~~~~~~~i~gi~v~~~~--aGH~~Gs~~ 152 (622)
+++.+.+.++........... ..|....+...+ +.+..+..++.++++|.+++++. +||++|+++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g~~~i~~~~~~pGHt~g~~~ 171 (246)
T 2fhx_A 97 SSDLTKQLRLEENKKDRIKAA-----EFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFSNELVEVSFPGPAHSPDNVV 171 (246)
T ss_dssp EEHHHHHHHHHHHHHHHHHHH-----HHCCCHHHHHHHHHTCCCCCSEEECTTTCEEEEETTEEEEEECCCCSSSTTCCE
T ss_pred EcHHHHHHHHhcchhhhHHHH-----hhhccccchhhhcccccCCCCceeecCCCCEEEECCEEEEEEeCCCCCCCCCEE
Confidence 999988776543221110000 001101111100 11234566788899999998873 799999999
Q ss_pred EEEEECCEEEEEEcCCCC
Q psy8348 153 FLIEIAGVKILYTGDFSR 170 (622)
Q Consensus 153 ~~I~~~~~~IlytGD~~~ 170 (622)
++++ +.+++|+||+-.
T Consensus 172 ~~~~--~~~~lf~GD~~~ 187 (246)
T 2fhx_A 172 VYFP--KKKLLFGGCMIK 187 (246)
T ss_dssp EEET--TTTEEEEETTCC
T ss_pred EEEc--CCCEEEECCEec
Confidence 8874 668999999865
No 50
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.39 E-value=2.1e-12 Score=127.45 Aligned_cols=123 Identities=25% Similarity=0.331 Sum_probs=84.8
Q ss_pred CCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHHH
Q psy8348 11 VGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKAI 90 (622)
Q Consensus 11 vG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~i 90 (622)
.+.+|++|+.++.+||||||... .+ ++ .+..++|+|||||.|.||++ ++.+. .+.+++
T Consensus 18 ~~~~~~li~~~~~~iLiD~g~~~--~~---~~----~~~~~id~VliTH~H~DH~~-~~~l~----~~~~vi-------- 75 (220)
T 1vjn_A 18 FGHACFALEMEGKTIVTDPFDES--VG---YP----IPNVTADVVTESHQHFDHNA-HHLVK----GNFRVI-------- 75 (220)
T ss_dssp EETTEEEEEETTEEEEESCCC----------C----CCCCBCSEEECSSCC---CG-GGGCB----SSCEEE--------
T ss_pred ccCCEEEEEECCEEEEEcCCCCc--CC---CC----cCCCCcCEEEECCCCCCCCC-chHhc----CCCEEE--------
Confidence 47899999999999999999631 11 11 13568999999999999998 76532 122232
Q ss_pred HHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeCCCCCC-------cEEEEEEECCEEEE
Q psy8348 91 YRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLG-------AAMFLIEIAGVKIL 163 (622)
Q Consensus 91 ~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~aGH~~G-------s~~~~I~~~~~~Il 163 (622)
.....+++++++++++++.|..+ +++|.|+.++.+++
T Consensus 76 ------------------------------------~~~g~~~~~~~~I~~~~~~H~~~~g~~~g~~~g~~i~~~g~~i~ 119 (220)
T 1vjn_A 76 ------------------------------------DRPGAYTVNGVKIKGVETFHDPSHGRERGKNIVFVFEGEGIKVC 119 (220)
T ss_dssp ------------------------------------CSSEEEEETTEEEEEEEEEEC-------CEEEEEEEEETTEEEE
T ss_pred ------------------------------------cCCCeEEECCEEEEEEeeecCCCCCccCCCcEEEEEEECCeEEE
Confidence 01125678899999999999863 58899999999999
Q ss_pred EEcCCCCCccccccccCCCCCCCcEEEEccc
Q psy8348 164 YTGDFSRQEDRHLMAAEIPPVKPDILITEST 194 (622)
Q Consensus 164 ytGD~~~~~~~~l~~a~~~~~~~DvLI~EsT 194 (622)
|+||+...++.... ..+ .++|++++++.
T Consensus 120 ~~GDt~~~~~~~~~-~~~--~~~Dvlil~~g 147 (220)
T 1vjn_A 120 HLGDLGHVLTPAQV-EEI--GEIDVLLVPVG 147 (220)
T ss_dssp ECTTCCSCCCHHHH-HHH--CCCSEEEEECC
T ss_pred EeCCCCCcchHHHH-Hhh--CCCCEEEEcCC
Confidence 99999876542111 111 37999999984
No 51
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=99.38 E-value=1.3e-13 Score=141.39 Aligned_cols=135 Identities=13% Similarity=0.161 Sum_probs=93.0
Q ss_pred CCCcEEEEEECCeEEEEeCCCCCCCCCCCCC-CCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcC--CCCeEEechhh
Q psy8348 11 VGRSCIMLEFKNKSIMMDCGIHPGLSGMDAL-PFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTG--FKGRCFMTHAT 87 (622)
Q Consensus 11 vG~sc~lI~~~~~~ILiD~G~~~~~~~~~~l-p~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~--~~~~Iy~t~~t 87 (622)
.|.|||+|+.++..+|||||..........+ ..+.. ...+|++||+||.|.||+||++.+.+... ...++|+...+
T Consensus 30 ~~~n~~li~~~~~~ilID~G~~~~~~~~~~l~~~l~~-~~~~i~~Ii~TH~H~DH~gg~~~l~~~~~~~~~~~v~~~~~~ 108 (289)
T 4ad9_A 30 QGTNTYLVGTGPRRILIDTGEPAIPEYISCLKQALTE-FNTAIQEIVVTHWHRDHSGGIGDICKSINNDTTYCIKKLPRN 108 (289)
T ss_dssp TCCEEEEECSSSSEEEECCCSTTCHHHHHHHHHHHHH-TTCCEEEEECSCSSHHHHTTHHHHHHHSCCSSCCCEEECCCS
T ss_pred CceEEEEEecCCceEEEeCCCCCChHHHHHHHHHHHH-cCCCceEEEEcCCCCcccccHHHHHHhhccCCCceEEecCCC
Confidence 4789999999889999999952111000000 00111 12379999999999999999999988742 25678886543
Q ss_pred HHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeC-CCCCCcEEEEEEECCEEEEEEc
Q psy8348 88 KAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNA-GHVLGAAMFLIEIAGVKILYTG 166 (622)
Q Consensus 88 ~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~a-GH~~Gs~~~~I~~~~~~IlytG 166 (622)
... ...+.. ....+..+..++.++++|.+++++.+ ||++|+++|+++ +.+++|+|
T Consensus 109 ~~~-----------------~~~~~~-----~~~~~~~~~~g~~~~~gg~~~~~~~~pGHt~~~~~~~~~--~~~~lftG 164 (289)
T 4ad9_A 109 PQR-----------------EEIIGN-----GEQQYVYLKDGDVIKTEGATLRVLYTPGHTDDHMALLLE--EENAIFSG 164 (289)
T ss_dssp SCC-----------------CCCBTT-----TTBCEEECCTTCEEEETTEEEEEEECCSSSTTCEEEEET--TTTEEEEE
T ss_pred cch-----------------hhhccC-----CCCceEEcCCCCEEEeCCeEEEEEECCCCCCCCEEEEEc--CCCEEEEe
Confidence 100 000000 11245778899999999999998865 999999999985 55799999
Q ss_pred CCCC
Q psy8348 167 DFSR 170 (622)
Q Consensus 167 D~~~ 170 (622)
|.-.
T Consensus 165 D~~~ 168 (289)
T 4ad9_A 165 DCIL 168 (289)
T ss_dssp TSSC
T ss_pred cccC
Confidence 9753
No 52
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.37 E-value=2.2e-13 Score=137.72 Aligned_cols=126 Identities=19% Similarity=0.231 Sum_probs=89.8
Q ss_pred cEecCCCCCCCCcEEEEEE-CCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCe
Q psy8348 2 KTLKGAGQEVGRSCIMLEF-KNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGR 80 (622)
Q Consensus 2 v~~LG~g~evG~sc~lI~~-~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~ 80 (622)
|+.++.++ +.+||+|.. ++..+|||+|.. . ..+..+..... +|++|++||.|.||+||++.+.+.. .+.+
T Consensus 10 i~~i~~~~--~n~~yli~~~~~~~vlID~G~~--~---~i~~~l~~~g~-~i~~Il~TH~H~DH~gg~~~l~~~~-~~~~ 80 (258)
T 2qed_A 10 LNSIPAFQ--DNYIWVLTNDEGRCVIVDPGEA--A---PVLKAIAEHKW-MPEAIFLTHHHHDHVGGVKELLQHF-PQMT 80 (258)
T ss_dssp EEEEEETT--TEEEEEEECTTSEEEEECCSCH--H---HHHHHHHHHTC-EEEEEECCSCCHHHHTTHHHHHHHC-TTCE
T ss_pred EEEecccC--ceEEEEEEECCCcEEEEeCCCc--H---HHHHHHHHcCC-CCCEEEeCCCCccccCCHHHHHHHC-CCCE
Confidence 34454333 456999998 678999999941 0 01111111122 7999999999999999999987763 2389
Q ss_pred EEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEe-CCCCCCcEEEEEEECC
Q psy8348 81 CFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYN-AGHVLGAAMFLIEIAG 159 (622)
Q Consensus 81 Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~-aGH~~Gs~~~~I~~~~ 159 (622)
||++..+. .. .....+..++.+++++.++++++ +||++|+++|+ +
T Consensus 81 v~~~~~~~------------~~------------------~~~~~~~~g~~~~~g~~~~~vi~tPGHt~g~~~~~----~ 126 (258)
T 2qed_A 81 VYGPAETQ------------DK------------------GATHLVGDGDTIRVLGEKFTLFATPGHTLGHVCYF----S 126 (258)
T ss_dssp EEECGGGG------------GG------------------TCSEECCTTCEEEETTEEEEEEECCSSSTTCEEEE----E
T ss_pred EEeccccc------------CC------------------CCcEEeCCCCEEEECCcEEEEEECCCCCCCCeEEE----c
Confidence 99987652 00 02356778889999998888875 49999999998 3
Q ss_pred EEEEEEcCCCC
Q psy8348 160 VKILYTGDFSR 170 (622)
Q Consensus 160 ~~IlytGD~~~ 170 (622)
.+++||||+-.
T Consensus 127 ~~~lftGD~l~ 137 (258)
T 2qed_A 127 RPYLFCGDTLF 137 (258)
T ss_dssp TTEEEEETTEE
T ss_pred CCEEEECCCCC
Confidence 46999999864
No 53
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=99.37 E-value=7e-13 Score=137.74 Aligned_cols=128 Identities=12% Similarity=0.100 Sum_probs=91.2
Q ss_pred CcEEEEEE--CCeEEEEeCCCCCCCCCCCCCCC-CCCCC----CCCccEEEcCCCchhhhcchHHHHHhcC-----CCCe
Q psy8348 13 RSCIMLEF--KNKSIMMDCGIHPGLSGMDALPF-VDLVE----SDQIDLLLISHFHLDHCGALPWFLLKTG-----FKGR 80 (622)
Q Consensus 13 ~sc~lI~~--~~~~ILiD~G~~~~~~~~~~lp~-~~~~~----~~~Id~IlITH~H~DHiggLp~l~~~~~-----~~~~ 80 (622)
.+||+|+. ++..+|||||.... .....+.. +.... +.+|++||+||.|.||+||++.|..... .+.+
T Consensus 40 n~~ylI~~~~~~~~ilID~G~~~~-~~~~~l~~~l~~~g~~~~~~~i~~IllTH~H~DH~gg~~~l~~~~~~~~~~~~~~ 118 (311)
T 2p18_A 40 NFSYLINDHTTHTLAAVDVNADYK-PILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSGGNAKLKAELEAMNSTVPVV 118 (311)
T ss_dssp EEEEEEEETTTTEEEEESCCSCCH-HHHHHHHHTC--------CCEEEEEEESSSSHHHHTTHHHHHHHHHSCC--CCCE
T ss_pred cEEEEEEeCCCCcEEEEeCCCChH-HHHHHHHHHHhhcCCCCCCCCccEEEeCCCCccccCCHHHHHHhhhhcccCCCCE
Confidence 45999998 68899999984211 00000100 00012 3589999999999999999999877641 1578
Q ss_pred EEechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeC-CCCCCcEEEEEEECC
Q psy8348 81 CFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNA-GHVLGAAMFLIEIAG 159 (622)
Q Consensus 81 Iy~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~a-GH~~Gs~~~~I~~~~ 159 (622)
||++..+. +. .....+..++.+++++.+++++++ ||++|+++|+++.++
T Consensus 119 v~~~~~~~----------------------~~--------~~~~~l~~g~~l~lg~~~l~vi~tPGHT~g~i~~~~~~~~ 168 (311)
T 2p18_A 119 VVGGANDS----------------------IP--------AVTKPVREGDRVQVGDLSVEVIDAPCHTRGHVLYKVQHPQ 168 (311)
T ss_dssp EEEEGGGT----------------------CT--------TCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEECTT
T ss_pred EEEechhc----------------------CC--------CCceEeCCCCEEEECCeEEEEEECCCCCcccEEEEEecCC
Confidence 99986541 00 123567788999999999988865 999999999998776
Q ss_pred ---E-EEEEEcCCCCC
Q psy8348 160 ---V-KILYTGDFSRQ 171 (622)
Q Consensus 160 ---~-~IlytGD~~~~ 171 (622)
. +++|+||+-..
T Consensus 169 ~~~~~~~lftGD~l~~ 184 (311)
T 2p18_A 169 HPNDGVALFTGDTMFI 184 (311)
T ss_dssp CGGGCEEEEEETTEET
T ss_pred cCCcCCEEEEcCcccc
Confidence 6 99999998643
No 54
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.37 E-value=4.6e-13 Score=143.79 Aligned_cols=133 Identities=13% Similarity=0.120 Sum_probs=96.6
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCC----CCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhh
Q psy8348 12 GRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLV----ESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHAT 87 (622)
Q Consensus 12 G~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~----~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t 87 (622)
..|||+|+.++..+|||||....... .+..+... +..+||+|++||.|.||+||++.+.++. .+.+||+++.+
T Consensus 34 ~~n~~li~~~~~~iLiD~g~~~~~~~--~~~~l~~~~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~-p~~~v~~~~~~ 110 (404)
T 2ohh_A 34 TYNAYLVCGDEGVALIDNSYPGTFDE--LMARVEDALQQVGMERVDYIIQNHVEKDHSGVLVELHRRF-PEAPIYCTEVA 110 (404)
T ss_dssp EECCEEEECSSCEEEECCCCTTCHHH--HHHHHHHHHHHHTCCCCCEEECSCCSHHHHTTHHHHHHHS-TTCCEEECHHH
T ss_pred eEEEEEEEeCCcEEEEeCCCCccHHH--HHHHHHHHhccCCccCCCEEEeCCCCCcccchHHHHHHHC-CCCEEEECHHH
Confidence 34899999888899999996311110 01111111 4578999999999999999999987763 36899999988
Q ss_pred HHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeC--CCCCCcEEEEEEECCEEEEEE
Q psy8348 88 KAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNA--GHVLGAAMFLIEIAGVKILYT 165 (622)
Q Consensus 88 ~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~a--GH~~Gs~~~~I~~~~~~Ilyt 165 (622)
.+.++..+ ... .......+..++.++++|.+++++++ ||++|+++++++ +.+++|+
T Consensus 111 ~~~~~~~~----~~~----------------~~~~~~~~~~g~~~~~g~~~i~~~~~p~gH~~~~~~~~~~--~~~~lf~ 168 (404)
T 2ohh_A 111 VKGLLKHY----PSL----------------REAEFMTVKTGDVLDLGGKTLTFLETPLLHWPDSMFTLLD--EDGILFS 168 (404)
T ss_dssp HHHHHHHC----GGG----------------GGSCEEECCTTCEEECSSCEEEEEECTTSSSTTCEEEEEE--TTTEEEC
T ss_pred HHHHHHHh----ccc----------------ccCCceEcCCCCEEEECCEEEEEEeCCCCCCCCceEEEEC--CCcEEEe
Confidence 76654321 000 00245677888999999988888866 799999999875 5679999
Q ss_pred cCCC
Q psy8348 166 GDFS 169 (622)
Q Consensus 166 GD~~ 169 (622)
||+-
T Consensus 169 GD~~ 172 (404)
T 2ohh_A 169 NDAF 172 (404)
T ss_dssp TTTT
T ss_pred cCcc
Confidence 9975
No 55
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=99.36 E-value=8.8e-14 Score=140.89 Aligned_cols=131 Identities=15% Similarity=0.150 Sum_probs=93.1
Q ss_pred CCCcEEEEEECCeEEEEeCCCCCCCCCC-CCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHH
Q psy8348 11 VGRSCIMLEFKNKSIMMDCGIHPGLSGM-DALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKA 89 (622)
Q Consensus 11 vG~sc~lI~~~~~~ILiD~G~~~~~~~~-~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~ 89 (622)
...|||+|+. ++.+|||||.......+ ..+. ..++..+||+|++||.|.||+||++.+.++. .+++||+++.+..
T Consensus 41 ~~~N~yli~~-~~~iLID~G~~~~~~~~~~~l~--~~~~~~~i~~IilTH~H~DH~gg~~~l~~~~-~~~~v~~~~~~~~ 116 (262)
T 3hnn_A 41 TTSNSYVIEG-DKTAIIDPPVESFMKIYLEALQ--QTVNLKKLDYVILGHFSPNRIPTFKALLELA-PQITFVCSLPAAG 116 (262)
T ss_dssp EEEEEEEEES-SSEEEECCCCHHHHHHHHHHHH--HHSCGGGEEEEECSSCCGGGHHHHHHHHHHC-TTCEEEECHHHHH
T ss_pred cEEEEEEEEC-CCEEEEECCCcchHHHHHHHHH--HhCChhhCCEEEECCCCcchhchHHHHHHHC-CCCEEEECHHHHH
Confidence 3458999997 78999999963100000 0010 0124568999999999999999999987763 3789999998877
Q ss_pred HHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeC-CEEEEEEe-CC-CCCCcEEEEEEECCEEEEEEc
Q psy8348 90 IYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVN-GIKFSAYN-AG-HVLGAAMFLIEIAGVKILYTG 166 (622)
Q Consensus 90 i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~-gi~v~~~~-aG-H~~Gs~~~~I~~~~~~IlytG 166 (622)
.++..+.. . ......++.++.++++ |.++++++ +| |++|++++++ ++.+++|||
T Consensus 117 ~l~~~~~~----------------~-----~~~~~~~~~g~~l~lg~~~~~~~i~tpg~Ht~g~~~~~~--~~~~~lfsG 173 (262)
T 3hnn_A 117 DLRAAFPD----------------D-----NLNILPMRGKETLDLGKGHVLKFLPIPSPRWPAGLCTYD--VQTQILYTD 173 (262)
T ss_dssp HHHHHSSS----------------S-----CCEEEECCSSCEEECSTTCEEEEEECCCSSCTTCEEEEE--TTTTEEEEE
T ss_pred HHHHHhCC----------------C-----CCceEEeCCCCEEEcCCCcEEEEEECCCCCCCCeeEEEe--CCCCEEEEe
Confidence 65432110 0 0245677889999998 87777664 35 9999988775 467899999
Q ss_pred CC
Q psy8348 167 DF 168 (622)
Q Consensus 167 D~ 168 (622)
|+
T Consensus 174 D~ 175 (262)
T 3hnn_A 174 KI 175 (262)
T ss_dssp TT
T ss_pred ec
Confidence 98
No 56
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.36 E-value=7.1e-13 Score=136.90 Aligned_cols=152 Identities=18% Similarity=0.227 Sum_probs=96.3
Q ss_pred CCCcEEEE-EECCeEEEEeCCCCCCCCC-CCCCCCCCCC-CCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhh
Q psy8348 11 VGRSCIML-EFKNKSIMMDCGIHPGLSG-MDALPFVDLV-ESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHAT 87 (622)
Q Consensus 11 vG~sc~lI-~~~~~~ILiD~G~~~~~~~-~~~lp~~~~~-~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t 87 (622)
.+.|||+| ..++..+|||||....... ...+.. .+ +..+|++|++||.|.||+||++.+.++. .+++||+++.+
T Consensus 22 ~~~n~~li~~~~~~~iLID~G~~~~~~~~~~~l~~--~~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~-~~a~v~~~~~~ 98 (303)
T 2vw8_A 22 VQVPVFLLRLGEASWALVEGGISRDAELVWADLCR--WVADPSQVHYWLITHKHYDHCGLLPYLCPRL-PNVQVLASERT 98 (303)
T ss_dssp TTSCEEEEEEETTEEEEECCCCGGGHHHHHHHHHH--HCSCGGGEEEEECCCCSTTTTTTHHHHGGGC-TTCEEEEEHHH
T ss_pred CCceEEEEEeCCCceEEEECCCCCcHHHHHHHHHH--HhcCcccceEEEeccCCccccCCHHHHHHhC-CCCeEEECHHH
Confidence 46799999 4889999999996321000 001110 12 4568999999999999999999987653 36899999988
Q ss_pred HHHHHHHHHh--HHhhhc--ccccccCCCHHHHHHhhcccEEecCCCeEEeCC-EEEEEEe-CCCCCCcEEEEEEECCEE
Q psy8348 88 KAIYRWLLSD--YIKVSN--ISTEQMLYTESDLEKSMDKIETINFHEEKDVNG-IKFSAYN-AGHVLGAAMFLIEIAGVK 161 (622)
Q Consensus 88 ~~i~~~~l~d--~~~~~~--~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~g-i~v~~~~-aGH~~Gs~~~~I~~~~~~ 161 (622)
.+.+...... ...... ...+.+......+. ......+..++.+++++ .++++++ +||++|+++|+++ +.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~lg~g~~l~~i~~pGHt~g~~~~~~~--~~~ 174 (303)
T 2vw8_A 99 CQAWKSESAVRVVERLNRQLLRAEQRLPEACAWD--ALPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYDV--RRR 174 (303)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCCTTCCCCCCCCGG--GSCEEEECTTCEEEEETTEEEEEEECTTSSTTCEEEEET--TTT
T ss_pred HHHHhccchhhHHHHHHHHHHHhhcccccccCCC--CCCceEcCCCCEEecCCCeEEEEEECCCCCcccEEEEEC--CCC
Confidence 7654321100 000000 00000000000000 01236678888999986 8887764 4999999999875 678
Q ss_pred EEEEcCCC
Q psy8348 162 ILYTGDFS 169 (622)
Q Consensus 162 IlytGD~~ 169 (622)
++|+||.-
T Consensus 175 ~lf~GD~~ 182 (303)
T 2vw8_A 175 RLFCGDAL 182 (303)
T ss_dssp EEEEETTT
T ss_pred EEEEcCcc
Confidence 99999985
No 57
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=99.33 E-value=6.2e-13 Score=134.60 Aligned_cols=121 Identities=12% Similarity=0.126 Sum_probs=87.2
Q ss_pred CCcEEEEEEC--CeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHH
Q psy8348 12 GRSCIMLEFK--NKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKA 89 (622)
Q Consensus 12 G~sc~lI~~~--~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~ 89 (622)
+.+||+|..+ +..+|||+|. + . ..+..+.... .+|++|++||.|.||+||++.+.+.. .+.+||++.....
T Consensus 11 ~n~~yli~~~~~~~~vlID~G~--~-~--~i~~~l~~~g-~~i~~IllTH~H~DH~gg~~~l~~~~-~~~~v~~~~~~~~ 83 (260)
T 1qh5_A 11 DNYMYLVIDDETKEAAIVDPVQ--P-Q--KVVDAARKHG-VKLTTVLTTHHHWDHAGGNEKLVKLE-SGLKVYGGDDRIG 83 (260)
T ss_dssp TEEEEEEEETTTTEEEEESCSS--H-H--HHHHHHHHHT-CEEEEEECCCSSHHHHTTHHHHHHHS-TTCEEEESCTTST
T ss_pred ceEEEEEEECCCCEEEEEcCCC--H-H--HHHHHHHHcC-CCccEEEeCCCCccccCCHHHHHHHC-CCCEEEECcccCC
Confidence 4559999984 6899999993 1 0 0111111112 25899999999999999999987763 2589999853210
Q ss_pred HHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEe-CCCCCCcEEEEE-EE--CCEEEEEE
Q psy8348 90 IYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYN-AGHVLGAAMFLI-EI--AGVKILYT 165 (622)
Q Consensus 90 i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~-aGH~~Gs~~~~I-~~--~~~~Ilyt 165 (622)
.....+..++.+++++.++++++ +||++|+++|++ +. ++.+++||
T Consensus 84 -------------------------------~~~~~~~~g~~~~~g~~~~~vi~tPGHt~g~~~~~~~~~~~~~~~~lft 132 (260)
T 1qh5_A 84 -------------------------------ALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGGSEPPAVFT 132 (260)
T ss_dssp -------------------------------TCSEECCTTCEEEETTEEEEEEECCSSSTTCEEEEEECSSSSSCCEEEE
T ss_pred -------------------------------CCCEEeCCCCEEEECCEEEEEEECCCCCCCCEEEEEeccCCCCCCEEEE
Confidence 02345677889999998888764 599999999998 33 46789999
Q ss_pred cCCCC
Q psy8348 166 GDFSR 170 (622)
Q Consensus 166 GD~~~ 170 (622)
||+-.
T Consensus 133 GD~l~ 137 (260)
T 1qh5_A 133 GDTLF 137 (260)
T ss_dssp ETTEE
T ss_pred cCccc
Confidence 99854
No 58
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.32 E-value=5.2e-13 Score=146.82 Aligned_cols=132 Identities=12% Similarity=0.144 Sum_probs=95.2
Q ss_pred CCCcEEEE--EECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhH
Q psy8348 11 VGRSCIML--EFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATK 88 (622)
Q Consensus 11 vG~sc~lI--~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~ 88 (622)
.+.|||+| +.+++.+|||+|.... ..+..+... ..+|++||+||.|.||++|++.|.++ ++.+||+++.+.
T Consensus 14 ~~~n~yli~~~~~~~~ilID~g~~~~----~~~~~l~~~-~~~i~~Il~TH~H~DH~gg~~~l~~~--~~~~i~~~~~~~ 86 (474)
T 3tp9_A 14 LAHASYLVGCQETGEACVIDPARDVE----PYLLTAKRE-GLRIVAALETHIHADFVSGAREMADR--AGAAICVSDEGP 86 (474)
T ss_dssp TTEEEEEEEETTTCEEEEESCCSCCH----HHHHHHHHH-TCEEEEEECSSCCSSSCCCHHHHHHH--HCCEEEEECCSC
T ss_pred ceeEEEEEEECCCCEEEEEcCCCChH----HHHHHHHHc-CCeeEEEEcCcCchhhhCCHHHHHHH--HCCcEEEcCcch
Confidence 56899999 6678999999995311 011111111 12699999999999999999998776 468999988764
Q ss_pred HHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEe-CCCCCCcEEEEEEECCE-----EE
Q psy8348 89 AIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYN-AGHVLGAAMFLIEIAGV-----KI 162 (622)
Q Consensus 89 ~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~-aGH~~Gs~~~~I~~~~~-----~I 162 (622)
..+.. . +. .......+..++.+.++++++++++ +||++|+++|++...+. ++
T Consensus 87 ~~~~~---~-------------~~------~~~~~~~~~~g~~~~~g~~~i~~i~tPGHt~g~~~~~~~~~~~~~~~~~~ 144 (474)
T 3tp9_A 87 PEWKS---E-------------YV------KAYPHRLLKDGDELHFGNVRIVVMHTPGHTPEHVSYLLYDGKTSPDVPMA 144 (474)
T ss_dssp GGGCC---G-------------GG------GGSSEEEECTTCEEEETTEEEEEEECCSSSSSCEEEEEEETTTEEEEEEE
T ss_pred hhhcc---c-------------cc------ccccceECCCCCEEEECCEEEEEEECCCCCCCCEEEEEecCCCCCCCceE
Confidence 32110 0 00 0012367888999999999998774 58999999999987755 89
Q ss_pred EEEcCCCCC
Q psy8348 163 LYTGDFSRQ 171 (622)
Q Consensus 163 lytGD~~~~ 171 (622)
+||||+-+.
T Consensus 145 lftGD~lf~ 153 (474)
T 3tp9_A 145 LFSGDFVFV 153 (474)
T ss_dssp EEEETSEET
T ss_pred EEeCCcccc
Confidence 999998643
No 59
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=99.32 E-value=5.2e-13 Score=134.69 Aligned_cols=120 Identities=14% Similarity=0.144 Sum_probs=87.6
Q ss_pred CcEEEEEEC--CeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHHH
Q psy8348 13 RSCIMLEFK--NKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKAI 90 (622)
Q Consensus 13 ~sc~lI~~~--~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~i 90 (622)
.+||+|..+ +..++||||. +. ..+..+.... .+|++|++||.|.||+||++.+.++. +.+||+++.+...
T Consensus 12 n~~yli~~~~~~~~~lID~g~--~~---~i~~~l~~~g-~~i~~Il~TH~H~DH~gg~~~l~~~~--~~~v~~~~~~~~~ 83 (254)
T 1xm8_A 12 NYAYILHDEDTGTVGVVDPSE--AE---PIIDSLKRSG-RNLTYILNTHHHYDHTGGNLELKDRY--GAKVIGSAMDKDR 83 (254)
T ss_dssp EEEEEEECTTTCCEEEECCSS--HH---HHHHHHHHHT-CCCCEEECSSCCHHHHTTHHHHHHHH--CCEEEEEGGGGGG
T ss_pred eEEEEEEECCCCEEEEEeCCC--HH---HHHHHHHHcC-CCccEEEECCCCCcccccHHHHHHHc--CCeEEEchhhhhc
Confidence 359999875 5789999993 10 0111111111 36899999999999999999988764 5899998765421
Q ss_pred HHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEe-CCCCCCcEEEEEEECCEEEEEEcCCC
Q psy8348 91 YRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYN-AGHVLGAAMFLIEIAGVKILYTGDFS 169 (622)
Q Consensus 91 ~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~-aGH~~Gs~~~~I~~~~~~IlytGD~~ 169 (622)
++ .....+..++.++++|.++++++ +||++|+++|+++ +.+++|+||+-
T Consensus 84 ~~----------------------------~~~~~~~~g~~~~lg~~~~~vi~tPGHt~g~~~~~~~--~~~~lftGD~l 133 (254)
T 1xm8_A 84 IP----------------------------GIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFP--GSRAIFTGDTM 133 (254)
T ss_dssp ST----------------------------TEEEEECTTCEEEETTEEEEEEECCSSSSSCEEEEEG--GGTEEEEETTE
T ss_pred CC----------------------------CCceeeCCCCEEEECCEEEEEEECCCCCCCcEEEEEC--CCCEEEEcCcc
Confidence 10 01245778889999998888875 5999999999985 45799999986
Q ss_pred C
Q psy8348 170 R 170 (622)
Q Consensus 170 ~ 170 (622)
.
T Consensus 134 ~ 134 (254)
T 1xm8_A 134 F 134 (254)
T ss_dssp E
T ss_pred c
Confidence 5
No 60
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.32 E-value=6e-13 Score=142.61 Aligned_cols=132 Identities=12% Similarity=0.114 Sum_probs=94.7
Q ss_pred CCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCC-CCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHH
Q psy8348 11 VGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDL-VESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKA 89 (622)
Q Consensus 11 vG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~-~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~ 89 (622)
...|||+|+. ++.+|||||.......+ ...+.. ++..+||+|++||.|.||+||++.+.++. .+.+||+++.+..
T Consensus 34 ~~~n~~li~~-~~~iliD~g~~~~~~~~--~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~-~~~~v~~~~~~~~ 109 (398)
T 1ycg_A 34 TTYNAYLIVD-DKTALVDTVYEPFKEEL--IAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMELC-PDAHVLCTQRAFD 109 (398)
T ss_dssp EEECCEEECS-SSCEEECCCCGGGHHHH--HHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHHC-TTCEEEECHHHHH
T ss_pred eeEEEEEEEC-CCEEEEeCCCcccHHHH--HHHHHHhcCcccCCEEEeCCCCcchhhhHHHHHHHC-CCCEEEEcHHHHH
Confidence 3468999985 57999999963111100 111111 35678999999999999999999987763 3689999998876
Q ss_pred HHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeC--CCCCCcEEEEEEECCEEEEEEcC
Q psy8348 90 IYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNA--GHVLGAAMFLIEIAGVKILYTGD 167 (622)
Q Consensus 90 i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~a--GH~~Gs~~~~I~~~~~~IlytGD 167 (622)
.++..+ . .. -.....+..++.+++++.+++++++ ||++|++++++ ++.+++|+||
T Consensus 110 ~l~~~~----~----------~~-------~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~~~~~~~~--~~~~~lf~GD 166 (398)
T 1ycg_A 110 SLKAHY----S----------HI-------DFNYTIVKTGTSVSLGKRSLTFIEAPMLHWPDSMFTYV--PEEALLLPND 166 (398)
T ss_dssp HHHHHT----C----------SC-------CCEEEECCTTCEEECSSCEEEEEECTTSSSTTCEEEEE--TTTTEEEEET
T ss_pred HHHHHh----C----------CC-------CcceEEeCCCCEEeeCCcEEEEEeCCCCCCCCcEEEEE--CCCcEEEecc
Confidence 554321 0 00 0135667888999999988888753 79999998875 5678999999
Q ss_pred CC
Q psy8348 168 FS 169 (622)
Q Consensus 168 ~~ 169 (622)
+.
T Consensus 167 ~~ 168 (398)
T 1ycg_A 167 AF 168 (398)
T ss_dssp TT
T ss_pred cc
Confidence 84
No 61
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=99.32 E-value=3e-13 Score=133.92 Aligned_cols=130 Identities=15% Similarity=0.189 Sum_probs=87.5
Q ss_pred CCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHH
Q psy8348 10 EVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKA 89 (622)
Q Consensus 10 evG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~ 89 (622)
..+.|||+|+.++..+|||||...... ...+..+.... .+|++|++||.|.||+||++.+.+ ++++||+++.+.+
T Consensus 30 ~~~~n~~li~~~~~~iliD~g~~~~~~-~~~~~~l~~~g-~~i~~ii~TH~H~DH~gg~~~l~~---~~~~v~~~~~~~~ 104 (228)
T 1jjt_A 30 VVPKHGLVVLVNAEAYLIDTPFTAKDT-EKLVTWFVERG-YKIKGSISSHFHSDSTGGIEWLNS---RSIPTYASELTNE 104 (228)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSHHHH-HHHHHHHHTTT-CEEEEEECSSSSHHHHTTHHHHHH---TTCCEEEEHHHHH
T ss_pred cccceEEEEEECCcEEEEeCCCChhhH-HHHHHHHHHcC-CCeeEEEeCCCChhhhccHHHHHh---CCCEEEEChHHHH
Confidence 456799999999999999999632100 00011111122 279999999999999999998765 3689999988876
Q ss_pred HHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEE--eCCCCCCcEEEEEEECCEEEEEEcC
Q psy8348 90 IYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAY--NAGHVLGAAMFLIEIAGVKILYTGD 167 (622)
Q Consensus 90 i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~--~aGH~~Gs~~~~I~~~~~~IlytGD 167 (622)
.++... . .+. . ..+ .++.+.+++.+++++ .+||++|+++|+++ +.+++|+||
T Consensus 105 ~~~~~~--------~-----~~~---------~-~~~-~g~~~~l~~~~i~~~~~~pGHt~g~~~~~~~--~~~~lf~GD 158 (228)
T 1jjt_A 105 LLKKDG--------K-----VQA---------T-NSF-SGVNYWLVKNKIEVFYPGPGHTPDNVVVWLP--ERKILFGGC 158 (228)
T ss_dssp HHHHTT--------C-----CCC---------S-EEE-CSSCCEEETTTEEEECCCCSSSTTCCEEEET--TTTEEEEET
T ss_pred HHHhcC--------C-----cCc---------c-ccc-cCcceEecCceEEEEecCCCCCCCcEEEEEC--CCcEEEEec
Confidence 653210 0 000 0 111 134555666566664 57999999999875 568999999
Q ss_pred CCC
Q psy8348 168 FSR 170 (622)
Q Consensus 168 ~~~ 170 (622)
+-.
T Consensus 159 ~~~ 161 (228)
T 1jjt_A 159 FIK 161 (228)
T ss_dssp TCC
T ss_pred ccc
Confidence 874
No 62
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=99.30 E-value=6.8e-13 Score=134.61 Aligned_cols=137 Identities=9% Similarity=0.100 Sum_probs=91.3
Q ss_pred CCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHH
Q psy8348 10 EVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKA 89 (622)
Q Consensus 10 evG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~ 89 (622)
..+.|||+|+.+++.+|||||..+... ...+..+......+|++|++||.|.||+||++.+.+ .+++||+++.+.+
T Consensus 65 ~~~~n~~li~~~~~~iLID~G~~~~~~-~~l~~~l~~~~g~~i~~VilTH~H~DH~gg~~~~~~---~~a~v~~~~~~~~ 140 (265)
T 2y8b_A 65 VYSSNGLIVRDADELLLIDTAWGAKNT-VALLAEIEKQIGLPVTRSISTHFHDDRVGGVDVLRA---AGVATYTSPLTRQ 140 (265)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSHHHH-HHHHHHHHHHTCSCEEEEECSSSSHHHHTTHHHHHH---TTCEEEECHHHHH
T ss_pred cccceEEEEEECCeEEEEeCCCCHHHH-HHHHHHHHHhcCCCeEEEEeCCCChhhcCCHHHHhh---CCCeEEECHHHHH
Confidence 346799999999999999999632100 000111111101279999999999999999998765 3689999998877
Q ss_pred HHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeCCCCCCcEEEEEEECCEEEEEEcCCC
Q psy8348 90 IYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKILYTGDFS 169 (622)
Q Consensus 90 i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~aGH~~Gs~~~~I~~~~~~IlytGD~~ 169 (622)
.++..... . .. ..| .. ....++.+.++++++....+||++|+++|+++ +.+++|+||+-
T Consensus 141 ~~~~~~~~------~-~~-~~~---------~~--~~~~~~~~~~g~~~v~~~~pGHt~g~~~~~~~--~~~~lf~GD~~ 199 (265)
T 2y8b_A 141 LAEAAGNE------V-PA-HSL---------KA--LSSSGDVVRFGPVEVFYPGAAHSGDNLVVYVP--AVRVLFGGCAV 199 (265)
T ss_dssp HHHHTTCC------C-CS-EEC---------SS--CSSTTEEEEETTEEEEECCSSSSTTCCEEEET--TTTEEEEETTS
T ss_pred HHHhcccc------c-cc-ccc---------cc--cCCCCcEEeecCEEEEecCCCCCCCCEEEEec--CCCEEEEcccc
Confidence 65321100 0 00 000 00 12445667778888876678999999999874 56799999987
Q ss_pred CC
Q psy8348 170 RQ 171 (622)
Q Consensus 170 ~~ 171 (622)
..
T Consensus 200 ~~ 201 (265)
T 2y8b_A 200 HE 201 (265)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 63
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=99.30 E-value=7.9e-13 Score=132.63 Aligned_cols=126 Identities=14% Similarity=0.171 Sum_probs=91.8
Q ss_pred CCCCcEEEEEEC----CeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEech
Q psy8348 10 EVGRSCIMLEFK----NKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTH 85 (622)
Q Consensus 10 evG~sc~lI~~~----~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~ 85 (622)
..+.+||+|+.+ ++.+|||+|.... . ..++.+.... .+|++|++||.|.||++|++.+.+.. .+++||++.
T Consensus 12 ~~~~~~yli~~~~~~~~~~ilID~g~~~~-~--~~~~~l~~~g-~~i~~Il~TH~H~DH~gg~~~l~~~~-~~~~v~~~~ 86 (245)
T 2gcu_A 12 ESSTFTYLLADVSHPDKPALLIDPVDKTV-D--RDLKLIDELG-LKLIYAMNTHVHADHVTGTGLLKTKL-PGVKSVISK 86 (245)
T ss_dssp TTTEEEEEEEETTSTTCEEEEESCBGGGH-H--HHHHHHHHHT-CEEEEEECSSCCSSSCBSHHHHHHHS-TTCEEEEEG
T ss_pred CCceEEEEEEcCCCCCCcEEEEeCCCchH-H--HHHHHHHHCC-CeeeEEEeCCCChhhhhhHHHHHHhC-CCCeEEecc
Confidence 457889999984 6899999996210 0 0011111112 25999999999999999999987633 568999987
Q ss_pred hhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEe-CCCCCCcEEEEEEECC----E
Q psy8348 86 ATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYN-AGHVLGAAMFLIEIAG----V 160 (622)
Q Consensus 86 ~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~-aGH~~Gs~~~~I~~~~----~ 160 (622)
.+.. .....+..++.+++++.+++++. +||++|+++|+++..+ .
T Consensus 87 ~~~~-------------------------------~~~~~~~~g~~~~~g~~~i~v~~tpGHt~g~~~~~~~~~~~~~~~ 135 (245)
T 2gcu_A 87 ASGS-------------------------------KADLFLEPGDKVSIGDIYLEVRATPGHTAGCVTYVTGEGADQPQP 135 (245)
T ss_dssp GGCC-------------------------------CCSEEECTTCEEEETTEEEEEEECCSSSTTCEEEEECCSTTSCSS
T ss_pred cccc-------------------------------cCCEEcCCCCEEEECCEEEEEEECCCCCCCCEEEEECCccccccc
Confidence 6521 02246778889999999988875 4999999999987542 3
Q ss_pred EEEEEcCCCCC
Q psy8348 161 KILYTGDFSRQ 171 (622)
Q Consensus 161 ~IlytGD~~~~ 171 (622)
+++||||+-..
T Consensus 136 ~~lftGD~~~~ 146 (245)
T 2gcu_A 136 RMAFTGDAVLI 146 (245)
T ss_dssp CEEEEETTSBT
T ss_pred cEEEECCcccc
Confidence 89999998754
No 64
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.22 E-value=2.4e-12 Score=138.86 Aligned_cols=131 Identities=13% Similarity=0.079 Sum_probs=92.2
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCC-CCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhHHH
Q psy8348 12 GRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVD-LVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKAI 90 (622)
Q Consensus 12 G~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~-~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~~i 90 (622)
..|||+|+. ++.+|||||.......+ +..+. .++..+||+|++||.|.||+||++.+.++. .+.+||+++.+.+.
T Consensus 40 ~~n~~li~~-~~~iLID~G~~~~~~~~--~~~l~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~-~~~~v~~~~~~~~~ 115 (414)
T 2q9u_A 40 SYNSYFIDD-ECPTVIDSVKYPFAEEW--LSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHKF-TNATFVCTKKCQEH 115 (414)
T ss_dssp EECCEEECS-SSCEEECCCCGGGHHHH--HHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHGGGS-TTCEEEECHHHHHH
T ss_pred ceeEEEEEC-CCEEEEeCCCcccHHHH--HHHHHHhcCcccCCEEEeCCCCcchhcCHHHHHHHC-CCCEEEECHHHHHH
Confidence 468999985 78999999962110000 00011 134578999999999999999999987653 47899999988775
Q ss_pred HHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeC--CCCCCcEEEEEEECCEEEEEEcCC
Q psy8348 91 YRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNA--GHVLGAAMFLIEIAGVKILYTGDF 168 (622)
Q Consensus 91 ~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~a--GH~~Gs~~~~I~~~~~~IlytGD~ 168 (622)
++..+. . . ......+..++.++++|.+++++++ ||++|+++++. ++.+++|+||+
T Consensus 116 ~~~~~~----~----------~-------~~~~~~~~~g~~~~lg~~~~~~~~~p~gHt~~~~~~~~--~~~~~lf~GD~ 172 (414)
T 2q9u_A 116 LKILYG----M----------E-------KATWLIVDDKYTLKIGKRTLKFIPVPLLHWPDSTFTYC--PEDKILFSNDG 172 (414)
T ss_dssp HHHHHC----C----------T-------TCCEEECCTTCCEECSSCEEEEEECTTSSSTTCEEEEE--TTTTEEEEETT
T ss_pred HHHHhC----C----------C-------CCeeEEeCCCCEEEECCeEEEEEeCCCCCCCCceEEEE--CCCeEEEEccc
Confidence 543210 0 0 0134667788899999987777654 79999988665 46789999996
Q ss_pred C
Q psy8348 169 S 169 (622)
Q Consensus 169 ~ 169 (622)
.
T Consensus 173 ~ 173 (414)
T 2q9u_A 173 F 173 (414)
T ss_dssp T
T ss_pred c
Confidence 4
No 65
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.22 E-value=4.3e-13 Score=136.48 Aligned_cols=143 Identities=12% Similarity=0.125 Sum_probs=88.6
Q ss_pred CCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechh
Q psy8348 7 AGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHA 86 (622)
Q Consensus 7 ~g~evG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~ 86 (622)
+.+.++.|||+|..+++.+|||+|..+.. ....+.++......+|++|++||.|.||+||+..|.+. +.++|+++.
T Consensus 69 ~~G~~~~N~ylv~~~~~~ilIDtg~~~~~-~~~l~~~i~~~~~~~I~~Ii~TH~H~DH~gg~~~l~~~---~~~v~~~~~ 144 (270)
T 4eyb_A 69 GFGAVASNGLIVRDGGRVLVVDTAWTDDQ-TAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAA---GIATYANAL 144 (270)
T ss_dssp TTEEEEEEEEEEEETTEEEEESCCSSHHH-HHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHT---TCEEEEEHH
T ss_pred CCCccceEEEEEEECCEEEEEeCCCCHHH-HHHHHHHHHHhcCCceEEEEeCCCChhhcCcHHHHHHC---CCeEEECHH
Confidence 33445679999999999999999964321 00001111111235799999999999999999997653 689999988
Q ss_pred hHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeCCCCCCcEEEEEEECCEEEEEEc
Q psy8348 87 TKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKILYTG 166 (622)
Q Consensus 87 t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~aGH~~Gs~~~~I~~~~~~IlytG 166 (622)
+.++++.. ........+. ......+..+..+..+++.+.....||++|++++++ +..+++|+|
T Consensus 145 ~~~~~~~~--------~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~pgHT~g~~~~~~--~~~~vLfsG 207 (270)
T 4eyb_A 145 SNQLAPQE--------GMVAAQHSLT-------FAANGWVEPATAPNFGPLKVFYPGPGHTSDNITVGI--DGTDIAFGG 207 (270)
T ss_dssp HHHHGGGG--------TCCCCSEEEC-------BCTTSBBCGGGSTTCTTEEEECCCSSSSSSCCEEEE--TTSSEEECT
T ss_pred HHHHHHhc--------CccccccccC-------CCCceeecCceeeecCceeEEecccccCCCCEEEEe--cCCcEEEEe
Confidence 77654211 0000000000 000111222233334566665566899999988776 467899999
Q ss_pred CCCC
Q psy8348 167 DFSR 170 (622)
Q Consensus 167 D~~~ 170 (622)
|+-.
T Consensus 208 D~l~ 211 (270)
T 4eyb_A 208 CLIK 211 (270)
T ss_dssp TTCC
T ss_pred Ceec
Confidence 9754
No 66
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.19 E-value=5.5e-12 Score=138.29 Aligned_cols=132 Identities=14% Similarity=0.213 Sum_probs=93.9
Q ss_pred CCCCcEEEEE--ECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhh
Q psy8348 10 EVGRSCIMLE--FKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHAT 87 (622)
Q Consensus 10 evG~sc~lI~--~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t 87 (622)
..+.|||+|. .+++.+|||||.... .+ +..+.. ...+|++|++||.|.||++|++.|.+++ +++||+++.+
T Consensus 34 ~~~~nsyli~~~~~~~~vlID~g~~~~--~~--~~~l~~-~g~~i~~Il~TH~H~DH~gg~~~l~~~~--~a~v~~~~~~ 106 (466)
T 3r2u_A 34 HLSQASYLIGCQKTGEAMIIDPIRDLS--SY--IRVADE-EGLTITHAAETHIHADFASGIRDVAIKL--NANIYVSGES 106 (466)
T ss_dssp TTTEEEEEEEETTTCEEEEESCCSCCH--HH--HHHHHH-HTCEEEEEECSSCCSSSCCCHHHHHHHH--CCEEEEECCS
T ss_pred CccceEEEEEeCCCCEEEEEcCCCCHH--HH--HHHHHH-CCCeeeEEEECCCChhhhccHHHHHHhh--CCeEEECcch
Confidence 3568999995 467899999994211 00 111111 1236999999999999999999988774 6899998764
Q ss_pred HHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEe-CCCCCCcEEEEEEEC-----CEE
Q psy8348 88 KAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYN-AGHVLGAAMFLIEIA-----GVK 161 (622)
Q Consensus 88 ~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~-aGH~~Gs~~~~I~~~-----~~~ 161 (622)
...+. ..+.. .....+..++.++++++++++++ +||++|+++|++... +.+
T Consensus 107 ~~~~~----------------~~~~~-------~~~~~~~~g~~l~~g~~~l~vi~tPGHT~g~~~~~~~~~~~~~~~~~ 163 (466)
T 3r2u_A 107 DDTLG----------------YKNMP-------NHTHFVQHNDDIYVGNIKLKVLHTPGHTPESISFLLTDEGAGAQVPM 163 (466)
T ss_dssp CTTTS----------------CCSCC-------TTCEEECTTCEEEETTEEEEEEECCSSSTTCEEEEEECGGGTCCSCC
T ss_pred hhhhc----------------cccCC-------CCCEEeCCCCEEEECCEEEEEEECCCCCCCCEEEEEcCCCccCCCce
Confidence 32110 00000 13467888999999999998875 589999999999863 346
Q ss_pred EEEEcCCCCC
Q psy8348 162 ILYTGDFSRQ 171 (622)
Q Consensus 162 IlytGD~~~~ 171 (622)
++||||+-..
T Consensus 164 ~lftGD~lf~ 173 (466)
T 3r2u_A 164 GLFSGDFIFV 173 (466)
T ss_dssp EEEEETTBCS
T ss_pred EEEECCcccC
Confidence 9999998654
No 67
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=99.14 E-value=8.8e-12 Score=120.93 Aligned_cols=122 Identities=14% Similarity=0.117 Sum_probs=85.7
Q ss_pred CCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhH
Q psy8348 9 QEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATK 88 (622)
Q Consensus 9 ~evG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~ 88 (622)
...+.|||+|+.+++.+|||||.... .....+... .+|++|++||. ||+||++.+.++ ++++||+++.+.
T Consensus 20 ~~~~~n~~li~~~~~~iliD~g~~~~----~~~~~l~~~--g~i~~ii~TH~--DH~gg~~~~~~~--~~a~v~~~~~~~ 89 (201)
T 2p97_A 20 RNIDFNGFAWIRPEGNILIDPVALSN----HDWKHLESL--GGVVWIVLTNS--DHVRSAKEIADQ--TYTKIAGPVAEK 89 (201)
T ss_dssp TTEEEEEEEECCTTCCEEESCCCCCH----HHHHHHHHT--TCCSEEECSSG--GGCTTHHHHHHH--SCCEEEEEGGGT
T ss_pred CCcceeEEEEEeCCeeEEEECCCCcH----HHHHHHHhc--CCCCEEEECCc--hhhhhHHHHHHh--cCCEEEEcHhHh
Confidence 35678999999988999999994211 001111112 28999999999 999999998776 458999998765
Q ss_pred HHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeCCCCCCcEEEEEEECCEEEEEEcCC
Q psy8348 89 AIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKILYTGDF 168 (622)
Q Consensus 89 ~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~aGH~~Gs~~~~I~~~~~~IlytGD~ 168 (622)
+.++. . ....+..++.+.. ++++...|+||++|+++|+++ + +++|+||+
T Consensus 90 ~~~~~---------------~------------~~~~~~~g~~~~~-~~~~~~~p~gHt~g~~~~~~~--~-~~lf~GD~ 138 (201)
T 2p97_A 90 ENFPI---------------Y------------CDRWLSDGDELVP-GLKVMELQGSKTPGELALLLE--E-TTLITGDL 138 (201)
T ss_dssp TSCSS---------------C------------CSEEECTTCBSST-TEEEEEECSSSSTTEEEEEET--T-TEEEECSS
T ss_pred hhhcc---------------c------------CceecCCCCEEcc-eEEEEECCCCCCCCcEEEEEc--C-CEEEECcc
Confidence 32100 0 0234555554432 677777777999999999876 4 89999998
Q ss_pred CCC
Q psy8348 169 SRQ 171 (622)
Q Consensus 169 ~~~ 171 (622)
-..
T Consensus 139 ~~~ 141 (201)
T 2p97_A 139 VRA 141 (201)
T ss_dssp EEB
T ss_pred ccc
Confidence 653
No 68
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=99.00 E-value=1.5e-10 Score=131.82 Aligned_cols=155 Identities=14% Similarity=0.085 Sum_probs=92.8
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCC-CCCCCCccEEEcCCCchhhhcchHHHHHh---cCCCCeEEechhh
Q psy8348 12 GRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVD-LVESDQIDLLLISHFHLDHCGALPWFLLK---TGFKGRCFMTHAT 87 (622)
Q Consensus 12 G~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~-~~~~~~Id~IlITH~H~DHiggLp~l~~~---~~~~~~Iy~t~~t 87 (622)
..|||+|+.++..||||+|...... ...+..+. .++..+|++|++||.|.||+||+..+... ...+++||+++.+
T Consensus 122 ~~N~ylI~~~~g~iLIDtG~~~~~a-~~~l~~i~~~~~~~~I~~IIlTH~H~DH~GG~~~l~~~~~~~~~~a~V~a~~~~ 200 (658)
T 2cfu_A 122 LANITFIRGDSGWIVVDTLTTPATA-RAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPAGF 200 (658)
T ss_dssp SSCEEEEECSSSEEEECCCSSHHHH-HHHHHHHHHHHCCCCEEEEECSBSCHHHHTTGGGTCCHHHHHTTSSEEEEETTH
T ss_pred CeEEEEEEECCEEEEEECCCCHHHH-HHHHHHHHhhCCCCCceEEEECCCChhhhCCHHHHHhhhhccCCCCEEEEchhH
Confidence 4789999988899999999742110 00011111 12357899999999999999999987542 1256899999987
Q ss_pred HHHHHH-------HHHhHH-hhhcc--ccc-cc-----C---CCHHHHHHhhcccEEe-cCCCeEEeCCEEEEEE-eCCC
Q psy8348 88 KAIYRW-------LLSDYI-KVSNI--STE-QM-----L---YTESDLEKSMDKIETI-NFHEEKDVNGIKFSAY-NAGH 146 (622)
Q Consensus 88 ~~i~~~-------~l~d~~-~~~~~--~~~-~~-----l---y~~~di~~~~~~i~~i-~~~~~~~i~gi~v~~~-~aGH 146 (622)
.+.+.. .+.... ..... ... .. + +..... ........+ ..++.+.++|.+++++ .+||
T Consensus 201 ~~~~~~e~~~~g~~~~~r~~~~~g~~lp~~~~~~v~~~l~~~~~~g~~-~~~~p~~~~~~dG~~l~lgg~~l~vi~tPGH 279 (658)
T 2cfu_A 201 MEAAIKENVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPL-SLLAPTRLIEGEGEDLVLDGVPFTFQNTPGT 279 (658)
T ss_dssp HHHHC---CTTHHHHHHHHHHHTTTTSCBSTTSBCCCSSSSCCCCSCC-CCCCCSEEECTTEEEEEETTEEEEEEECTTS
T ss_pred HHHHhhhhhhhhhHHHHHHHHHhccCCChhhhhhhhhcccccccCCCc-cCCCCcEEEecCceEEEECCEEEEEEeCCCC
Confidence 654310 000000 00000 000 00 0 000000 000112344 4677888999888876 4688
Q ss_pred -CCCcEEEEEEECCEEEEEEcCCCC
Q psy8348 147 -VLGAAMFLIEIAGVKILYTGDFSR 170 (622)
Q Consensus 147 -~~Gs~~~~I~~~~~~IlytGD~~~ 170 (622)
++|+++|++. +.+++|+||.-.
T Consensus 280 hTpg~i~~~~p--~~~vLftGD~v~ 302 (658)
T 2cfu_A 280 ESPAEMNIWLP--RQKALLMAENVV 302 (658)
T ss_dssp SSSSBEEEEET--TTTEEECTTTSC
T ss_pred CCCCcEEEEEC--CCCEEEEecccc
Confidence 9999998874 668999999865
No 69
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=98.38 E-value=2.3e-10 Score=129.82 Aligned_cols=155 Identities=15% Similarity=0.127 Sum_probs=90.3
Q ss_pred CcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCC-CCCCCccEEEcCCCchhhhcchHHHHHh---cCCCCeEEechhhH
Q psy8348 13 RSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDL-VESDQIDLLLISHFHLDHCGALPWFLLK---TGFKGRCFMTHATK 88 (622)
Q Consensus 13 ~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~-~~~~~Id~IlITH~H~DHiggLp~l~~~---~~~~~~Iy~t~~t~ 88 (622)
.||++|+.++..+|||||...... ...+..+.. ++..+|++|++||.|.||+||+..+... ..++.+||+++.+.
T Consensus 133 ~N~~lI~~~~~~iLIDtG~~~~~a-~~~l~~i~~~~~~~~I~~IilTH~H~DH~gG~~~l~~~~~~~~~~a~I~a~~~~~ 211 (668)
T 2yhe_A 133 ANMTIIEGDSGLVLIDTLTTAETA-RAALDLYFQHRPKKPIVAVVYSHSHIDHFGGARGIIDEADVKAGKVKVFAPSGFM 211 (668)
Confidence 589999988899999999743211 111222222 2457899999999999999999998653 12467999998863
Q ss_pred H--HHHHHHH-hHH--hhhc-ccc----c-ccCCC-----H----HHHHHhhcccEEecCCCeEEeCCEEEEEE-eCC-C
Q psy8348 89 A--IYRWLLS-DYI--KVSN-IST----E-QMLYT-----E----SDLEKSMDKIETINFHEEKDVNGIKFSAY-NAG-H 146 (622)
Q Consensus 89 ~--i~~~~l~-d~~--~~~~-~~~----~-~~ly~-----~----~di~~~~~~i~~i~~~~~~~i~gi~v~~~-~aG-H 146 (622)
+ ..+..+. ... +... .+. . ...+. . ............+..++.++++|.+++++ .+| |
T Consensus 212 e~~~~e~~~~g~~~~~r~~~~~G~~lp~~~~~~~~~~l~~~~~~~~~~~~~~P~~~~~~dg~~l~lgg~~l~vi~tPG~H 291 (668)
T 2yhe_A 212 EHAVSENILAGTAMARRGQYQSGVMVPRGAQAQVDSGLFKTTATNATNTLVAPNVLIEKPYERHTVDGVELEFQLTLGSE 291 (668)
Confidence 2 1111100 000 0000 000 0 00000 0 00000000111234567788899888776 345 9
Q ss_pred CCCcEEEEEEECCEEEEEEcCCCC
Q psy8348 147 VLGAAMFLIEIAGVKILYTGDFSR 170 (622)
Q Consensus 147 ~~Gs~~~~I~~~~~~IlytGD~~~ 170 (622)
++|++++++. ..+++|+||.-.
T Consensus 292 tpg~i~~~~p--~~~vLftGD~~~ 313 (668)
T 2yhe_A 292 APSDMNIYLP--QFKVLNTADNAP 313 (668)
Confidence 9999998875 668999999754
No 70
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=98.51 E-value=5.8e-08 Score=99.21 Aligned_cols=73 Identities=19% Similarity=0.266 Sum_probs=54.4
Q ss_pred CCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhhH
Q psy8348 12 GRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATK 88 (622)
Q Consensus 12 G~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t~ 88 (622)
.++|++|+.++..||||||.... -...+.. ..+++.+||+|++||.|.||+||++.+.+.. .+.+||+++.+.
T Consensus 32 ~g~s~li~~~~~~iLiD~G~~~~--~~~~l~~-~g~~~~~i~~v~lTH~H~DH~ggl~~~~~~~-~~~~v~~~~~~~ 104 (284)
T 2p4z_A 32 HGLSLLLKKGNKEIVVDTGQSEN--FIKNCGL-MGIDVGRIKKVVLTHGHYDHIGGLKGLLERN-PEVKIYTHKEIL 104 (284)
T ss_dssp SSCEEEEEETTEEEEECCCSSTH--HHHHHHH-TTCCGGGCCEEECCCSCHHHHTTHHHHHHHC-TTCEEEEEGGGG
T ss_pred CEEEEEEEECCeEEEEeCCCCHH--HHHHHHH-cCCChhhCCEEEECCCCchhhccHHHHHHHc-CCCceecCHHHH
Confidence 46899999999999999996211 0011110 1246678999999999999999999987643 468999998764
No 71
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=97.84 E-value=3.2e-06 Score=85.23 Aligned_cols=61 Identities=20% Similarity=0.304 Sum_probs=42.4
Q ss_pred CcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeEEechhh
Q psy8348 13 RSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHAT 87 (622)
Q Consensus 13 ~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~Iy~t~~t 87 (622)
++|++|+. +|||||... .-...+. ..++++. |+|++||.|.||+||++.+ ++.+||+++..
T Consensus 32 G~s~lie~----iLiD~G~~~--~l~~~l~-~~gi~~~--~~IvlTH~H~DH~ggl~~l-----~~~~v~~~~~~ 92 (267)
T 3h3e_A 32 GFSVLVDS----VLFDTGKSD--VFLKNAR-KLGIDLP--KDVLISHGHYDHAGGLLYL-----SGKRVWLRKEA 92 (267)
T ss_dssp SCEEEETT----EEECCCSSS--HHHHHHH-HTTCCCC--SEEECSCSCHHHHGGGGGC-----CSCEEEEEGGG
T ss_pred EeHHeeee----EEEECCCcH--HHHHHHH-HCCcCcC--CEEEECCCChhhhCCHHHh-----cCCEEEECHHH
Confidence 56788865 999999631 0000110 0123433 9999999999999999986 57899998764
No 72
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=82.10 E-value=1.6 Score=42.87 Aligned_cols=58 Identities=12% Similarity=0.169 Sum_probs=44.0
Q ss_pred ccCCCHHHHHHHHHHhCCCeEEEEcCCh-----HHHHHHHHHHHHhhcCCCCCceEEeeCCCCcEEEE
Q psy8348 382 SAHTDYQQTSEFVRELRPAHVVLVHGEQ-----NEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDL 444 (622)
Q Consensus 382 S~Had~~el~~~i~~l~P~~VilvHGe~-----~~~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l 444 (622)
..|.+.+|..++++.++|+.+||+|=.. .....+++.+++ .+.. .++.+|+.||+++|
T Consensus 202 ~~hm~~~ea~~~~~~l~~~~vi~~H~~~~~~~~~~~~~l~~~~~~-~g~~----~~~~~~~~Ge~~~l 264 (264)
T 3rpc_A 202 SIIMGTKDIGRMVVRKPEAKIIAVHMDTVNHTATSRKDVRKFIKG-NNIE----SHVAVPEDGETITL 264 (264)
T ss_dssp CSSCCHHHHHHHHHHCTTSEEEEESCSSSTTBCSCHHHHHHHHHH-TTCT----TTEECCCTTCEEEC
T ss_pred CcccCHHHHHHHHHhCCcCeEEEEccccccccccCHHHHHHHHHH-cCCC----CcEEecCCCCEEeC
Confidence 5699999999999999999999999763 224555555543 2321 25899999999875
No 73
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=79.14 E-value=2.7 Score=43.40 Aligned_cols=67 Identities=4% Similarity=-0.001 Sum_probs=46.8
Q ss_pred ccCCCHHHHHHHHHHhCCCeEEEEcCChH-----HHHHHHHHHHHhhcCCCCCceEEeeCCCCcEEEEeecce
Q psy8348 382 SAHTDYQQTSEFVRELRPAHVVLVHGEQN-----EMSRLKAALTREYEDDPNTSMELYNPRNTVSVDLYFKGE 449 (622)
Q Consensus 382 S~Had~~el~~~i~~l~P~~VilvHGe~~-----~~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l~~~~~ 449 (622)
+.|.+.++..++++.++|+.+|++|.... ....+++.+.++-+ ..+...++++++.|++++++..++
T Consensus 257 ~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~~~~~~~~~~-~~~~~~~~~~~~~Ge~~~l~~d~~ 328 (360)
T 2wyl_A 257 TDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEMKKD-RLKYGFKPFIWQVGGKFTWPLDKD 328 (360)
T ss_dssp CCSBCHHHHHHHHHHHTCSEEEEESTTTBGGGCCCTHHHHHHHHHHTT-TTTCCCEECBCCTTCEEEETTTTT
T ss_pred cCCCCHHHHHHHHHHhCCCEEEEEeeccccccCCCHHHHHHHHHhhhh-hhcCCcceEEccCCcEEEecCCCC
Confidence 56999999999999999999999997642 13345554542211 001124789999999999974433
No 74
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=78.18 E-value=3.6 Score=42.91 Aligned_cols=64 Identities=8% Similarity=-0.057 Sum_probs=45.0
Q ss_pred ccCCCHHHHHHHHHHhCCCeEEEEcCChH-----HHHHHHHHHHHhhcCCCCCceEEeeCCCCcEEEEee
Q psy8348 382 SAHTDYQQTSEFVRELRPAHVVLVHGEQN-----EMSRLKAALTREYEDDPNTSMELYNPRNTVSVDLYF 446 (622)
Q Consensus 382 S~Had~~el~~~i~~l~P~~VilvHGe~~-----~~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l~~ 446 (622)
..|.+..+..++++.++|+.+|++|.... ....+++.+..+- ...+.+.++++++.|++++++.
T Consensus 282 ~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~~G~~~~l~~ 350 (379)
T 3bv6_A 282 TDKMTSSDVLRAAESLDCQVVVPFHHDIWANFQNDPREIEVLWNMKK-DRLQYQFAPFFWQVGGKYTYPT 350 (379)
T ss_dssp CCSBCHHHHHHHHHHHTCSEEEEESTTSBGGGCCCTHHHHHHHHHHT-TTTTCCCEECBCCTTCEEEETT
T ss_pred cccCCHHHHHHHHHHcCCCEEEEEeecccccccCCHHHHHHHHHhhh-hhhcCCCceEEccCCcEEEecC
Confidence 56999999999999999999999996642 2334444444211 1000124789999999999963
No 75
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=71.75 E-value=5 Score=39.17 Aligned_cols=56 Identities=7% Similarity=0.137 Sum_probs=41.7
Q ss_pred ccCCCHHHHHHHHHHhCCCeEEEEcCChH-HHHHHHHHHHHhhcCCCCCceEEeeCCCCcEEE
Q psy8348 382 SAHTDYQQTSEFVRELRPAHVVLVHGEQN-EMSRLKAALTREYEDDPNTSMELYNPRNTVSVD 443 (622)
Q Consensus 382 S~Had~~el~~~i~~l~P~~VilvHGe~~-~~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~ 443 (622)
.+|.+.++..++++.++|++++++|-... ...++.+.+++.+. .++.+++.|++++
T Consensus 211 ~~H~~~~~a~~~~~~~~~~~lil~H~~~~~~~~~~~~~~~~~~~------~~v~~a~dg~~~~ 267 (268)
T 1zkp_A 211 AGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAKQIFS------GHITLAHSGYVWN 267 (268)
T ss_dssp GTCCBHHHHHHHHHHTTCSEEEEESBCSSSCTHHHHHHHHTTCC------SEEEECCTTCEEE
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEECCCCCCChHHHHHHHHHhCC------CCEEEEeCCcccc
Confidence 45999999999999999999999997653 23334445555442 2588899998874
No 76
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=71.35 E-value=7.7 Score=37.78 Aligned_cols=58 Identities=14% Similarity=0.170 Sum_probs=43.8
Q ss_pred ccCCCHHHHHHHHHHhCCCeEEEEcCChHH---HHHHHHHHHHhhcCCCCCceEEeeCCCCcEEEE
Q psy8348 382 SAHTDYQQTSEFVRELRPAHVVLVHGEQNE---MSRLKAALTREYEDDPNTSMELYNPRNTVSVDL 444 (622)
Q Consensus 382 S~Had~~el~~~i~~l~P~~VilvHGe~~~---~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l 444 (622)
.+|.+.++..++++.++|++++++|=..+. ...+.+++++.|. +.++.+++.|++++|
T Consensus 220 ~~H~t~~~a~~~~~~~~~~~lvl~H~~~~~~~~~~~~~~~~~~~~~-----~~~v~~a~~G~~~~~ 280 (280)
T 2e7y_A 220 KNHAAIDEVMESVKAAGVKKVILYHISTRYIRQLKSVIKKYREEMP-----DVEILYMDPRKVFEM 280 (280)
T ss_dssp -CCCBHHHHHHHHHHHTCCEEEEESCCGGGHHHHHHHHHHHHHHCT-----TSEEEECCTTSCEEC
T ss_pred cCCCCHHHHHHHHHHcCCCEEEEEeecCcCcchHHHHHHHHHHhCC-----CceEEEeCCCceeeC
Confidence 579999999999999999999999987743 3344444444442 257899999998764
No 77
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=60.94 E-value=13 Score=37.09 Aligned_cols=57 Identities=16% Similarity=0.228 Sum_probs=44.6
Q ss_pred ccCCCHHHHHHHHHHhCCCeEEEEcCChH----HHHHHHHHHHHhhcCCCCCceEEeeCCCCcEEEEe
Q psy8348 382 SAHTDYQQTSEFVRELRPAHVVLVHGEQN----EMSRLKAALTREYEDDPNTSMELYNPRNTVSVDLY 445 (622)
Q Consensus 382 S~Had~~el~~~i~~l~P~~VilvHGe~~----~~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l~ 445 (622)
.+|++.+|..++.+.++|+++|++|=..+ .+..+.+++++.+ + ++.+++.|++++++
T Consensus 245 ~~H~t~~~a~~~a~~~~~~~lil~H~s~~~~~~~~~~~~~e~~~~~---~----~~~~a~dg~~~~l~ 305 (320)
T 1y44_A 245 YYHSTTEQAAVTAKEARAKQLILTHISARYQGDASLELQKEAVDVF---P----NSVAAYDFLEVNVP 305 (320)
T ss_dssp TTCCBHHHHHHHHHHHTCSEEEEECBCTTSCTTHHHHHHHHHHHHC---S----SEEECCTTCEEECC
T ss_pred cCCCCHHHHHHHHHHcCCCEEEEEeEcCCCCCcchHHHHHHHHHhC---C----CcEeccCCCEEEec
Confidence 67999999999999999999999997663 2344555555444 1 37899999999986
No 78
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=59.54 E-value=14 Score=36.65 Aligned_cols=56 Identities=13% Similarity=0.205 Sum_probs=41.6
Q ss_pred ccCCCHHHHHHHHHHhCCCeEEEEcCChHH----HHHHHHHHHHhhcCCCCCceEEeeCCCCcEEEE
Q psy8348 382 SAHTDYQQTSEFVRELRPAHVVLVHGEQNE----MSRLKAALTREYEDDPNTSMELYNPRNTVSVDL 444 (622)
Q Consensus 382 S~Had~~el~~~i~~l~P~~VilvHGe~~~----~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l 444 (622)
.+|++.+|..++.+.++|+++|++|=..+. +..+.++.++.+ + ++.+++.|.++++
T Consensus 247 ~~H~t~~~a~~~a~~~~~~~lvl~H~s~~~~~~~~~~~~~e~~~~~---~----~~~~a~Dg~~~~~ 306 (306)
T 2cbn_A 247 RGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLLRECRSIF---P----ATELANDFTVFNV 306 (306)
T ss_dssp TTCCBHHHHHHHHHHHTCSEEEEECBCTTCCHHHHHHHHHHHHTTC---S----CEEECCTTCEEEC
T ss_pred cCCCCHHHHHHHHHHcCCcEEEEEeecCCCCCCchhHHHHHHHHhC---C----CcEEcccccEeeC
Confidence 579999999999999999999999987642 233333333333 1 3789999998864
No 79
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=50.89 E-value=16 Score=37.84 Aligned_cols=62 Identities=19% Similarity=0.218 Sum_probs=40.7
Q ss_pred ccCCCHHHHHHHHHHhCCCeEEEEcCChHHH-------------HHHHHHHHHhhcCCCCCceEEeeCCCCcEEEEeecc
Q psy8348 382 SAHTDYQQTSEFVRELRPAHVVLVHGEQNEM-------------SRLKAALTREYEDDPNTSMELYNPRNTVSVDLYFKG 448 (622)
Q Consensus 382 S~Had~~el~~~i~~l~P~~VilvHGe~~~~-------------~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l~~~~ 448 (622)
..|+...|..++.+..+++.++|+|=.++.. ..+.++.++.|. +.++++.+.|++++++++.
T Consensus 287 ~~H~t~~~A~~~a~~~~~k~lil~H~s~ry~~~~~~~~~~~~~~~~~~~ea~~~f~-----~~~~~~a~dg~~~~i~~~~ 361 (368)
T 3zwf_A 287 HGHSTPQMAATFAKLCRAKRLVLTHFSQRYKPVALAREGETDGIAELKKQAESVLD-----LQEVTLAEDFMVISIPIKK 361 (368)
T ss_dssp TTCCCHHHHHHHHHHTTCSEEEEECBCCCC--------------------------------CEEEECCTTCEEECCC--
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEEeeCcccCccccccccccchHHHHHHHHHHhcC-----CCceEEecCCcEEEeecCc
Confidence 4699999999999999999999999776532 334444333331 1268899999999998754
No 80
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=48.34 E-value=26 Score=34.55 Aligned_cols=56 Identities=14% Similarity=0.222 Sum_probs=42.7
Q ss_pred cccCCCHHHHHHHHHHhCCCeEEEEcCChHHHHHHHHHHHHhhcCCCCCceEEeeCCCCcEEEEe
Q psy8348 381 FSAHTDYQQTSEFVRELRPAHVVLVHGEQNEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDLY 445 (622)
Q Consensus 381 fS~Had~~el~~~i~~l~P~~VilvHGe~~~~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l~ 445 (622)
-..|.+.++..++++.++|++++++|=....- . +.+++++. ..+...+.|.+++|+
T Consensus 237 ~~~H~~~~~a~~~~~~~~~k~lvl~H~~~~~~--~-~~~~~~~~------~~v~~a~DG~~i~l~ 292 (293)
T 3md7_A 237 HPSHFSLGEALEWIEKLSPKRAILTHMHVPLD--Y-ETVMRETP------HHVEPGYDGLRFEVA 292 (293)
T ss_dssp BTTBCCHHHHHHHHHHHCCSEEEEESBCTTCC--H-HHHHHHSC------TTEEECCTTCEEEEC
T ss_pred CCCCCCHHHHHHHHHHcCCCEEEEECCCCCCC--H-HHHHhhcC------CCcEEeeCCcEEEec
Confidence 36799999999999999999999999776521 1 23444442 247888999999885
No 81
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=37.42 E-value=90 Score=30.80 Aligned_cols=64 Identities=22% Similarity=0.282 Sum_probs=44.8
Q ss_pred CCCCCcEEEEcccCCCCCCchh-hhHHHHHHHHHHHHHHcC-CeEEEeecc--cchHHHHHHHHHHHHH
Q psy8348 182 PPVKPDILITESTYGTHVHEQR-EEREGRFTSLIHDIVNRG-GRCLIPVFA--LGRAQELLLILDEYWS 246 (622)
Q Consensus 182 ~~~~~DvLI~EsTyg~~~~~~~-~~~~~~~~~~i~~~l~~g-g~vliP~fa--lGR~qEll~iL~~~~~ 246 (622)
+...+|+++++....+. +... ..+.-.+.+.+.+.++.| |..++-+|. -+-..+++..+..++.
T Consensus 137 ~~~~~DlVlsD~apnsG-~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk~~F~ 204 (277)
T 3evf_A 137 EPVKCDTLLCDIGESSS-SSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQRRFG 204 (277)
T ss_dssp CCCCCSEEEECCCCCCS-CHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHC
T ss_pred CCCCccEEEecCccCcC-chHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHHHhcC
Confidence 34579999998643311 2111 122234578888899999 999999999 6667788888888875
No 82
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=37.10 E-value=39 Score=29.40 Aligned_cols=62 Identities=13% Similarity=0.173 Sum_probs=41.7
Q ss_pred CCCcEEEEcccCCCCCCchhhhH-----HHHHHHHHHHHHHcCCeEEEeecccchHHHHHHHHHHHH
Q psy8348 184 VKPDILITESTYGTHVHEQREER-----EGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLILDEYW 245 (622)
Q Consensus 184 ~~~DvLI~EsTyg~~~~~~~~~~-----~~~~~~~i~~~l~~gg~vliP~falGR~qEll~iL~~~~ 245 (622)
...|++++...+........... ...+.+.+.+.++.||.+++..+......++...+.++|
T Consensus 87 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~ 153 (180)
T 1ej0_A 87 SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSLF 153 (180)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHHHE
T ss_pred CceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHHhh
Confidence 47899998766433222211111 145667777888999999998888878788877777654
No 83
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=36.25 E-value=78 Score=31.35 Aligned_cols=67 Identities=16% Similarity=0.086 Sum_probs=46.6
Q ss_pred CCCCCCcEEEEcccCCCCCCchhhhHHHHHHHHHHHHHHcC--CeEEEeecc--cchHHHHHHHHHHHHHh
Q psy8348 181 IPPVKPDILITESTYGTHVHEQREEREGRFTSLIHDIVNRG--GRCLIPVFA--LGRAQELLLILDEYWSL 247 (622)
Q Consensus 181 ~~~~~~DvLI~EsTyg~~~~~~~~~~~~~~~~~i~~~l~~g--g~vliP~fa--lGR~qEll~iL~~~~~~ 247 (622)
++..++|++++|-...+..+..-..+...+.+...+.++.| |..++-+|. -+-..+++..+..+|..
T Consensus 152 l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~l~~~lk~~F~~ 222 (282)
T 3gcz_A 152 MEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIMEELSRLQLKHGG 222 (282)
T ss_dssp SCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHHHHHHHHHHHHCC
T ss_pred cCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHHHHHHHHHHhcCC
Confidence 34568999999865432211111223234677788889999 999999999 66678888888888753
No 84
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=33.17 E-value=2.2e+02 Score=28.36 Aligned_cols=87 Identities=15% Similarity=0.108 Sum_probs=57.2
Q ss_pred CCCCCcEEEEcccCCCCCCchhhhHHHHHHHHHHHHHHcC-CeEEEeecc--cchHHHHHHHHHHHHHh----CC--CCC
Q psy8348 182 PPVKPDILITESTYGTHVHEQREEREGRFTSLIHDIVNRG-GRCLIPVFA--LGRAQELLLILDEYWSL----HP--ELH 252 (622)
Q Consensus 182 ~~~~~DvLI~EsTyg~~~~~~~~~~~~~~~~~i~~~l~~g-g~vliP~fa--lGR~qEll~iL~~~~~~----~~--~l~ 252 (622)
+...+|+++++....+..+..-..+...+.+...+.++.| |..++-+|. -+-..+++..+..++.. .| .-.
T Consensus 144 ~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk~~F~~V~~~KPaSR~~ 223 (300)
T 3eld_A 144 PTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLRFGGGIVRVPFSRNS 223 (300)
T ss_dssp CCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHHHHHCCEEECCTTSCTT
T ss_pred CCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHHHhCCcEEEEeCCCCCC
Confidence 3457999999865332111111223345677788889999 999999999 67778999999988854 23 113
Q ss_pred CccEEEECchHHHHHH
Q psy8348 253 DIPIYYASSLAKKCMS 268 (622)
Q Consensus 253 ~ipI~~~s~~a~~~~~ 268 (622)
..-+|+.+.....+..
T Consensus 224 S~E~Y~V~~~r~n~~~ 239 (300)
T 3eld_A 224 THEMYYISGARNNITH 239 (300)
T ss_dssp CCCEEEESSCCCCHHH
T ss_pred ChHHeeeccCCCCcch
Confidence 4678888765444443
No 85
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=31.79 E-value=17 Score=33.64 Aligned_cols=60 Identities=15% Similarity=0.239 Sum_probs=39.2
Q ss_pred CCcEEEEcccCCCCCCchhh-----hHHHHHHHHHHHHHHcCCeEEEeecccchHHHHHHHHHHH
Q psy8348 185 KPDILITESTYGTHVHEQRE-----EREGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLILDEY 244 (622)
Q Consensus 185 ~~DvLI~EsTyg~~~~~~~~-----~~~~~~~~~i~~~l~~gg~vliP~falGR~qEll~iL~~~ 244 (622)
.+|+++++......-..... +......+.+.+.++.||+.++-+|.-...++++..+..+
T Consensus 91 ~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~ 155 (191)
T 3dou_A 91 KVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKN 155 (191)
T ss_dssp SEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGG
T ss_pred cceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHh
Confidence 68999998643222111111 1123445566778899999999999887777887777654
No 86
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=26.69 E-value=45 Score=31.47 Aligned_cols=29 Identities=10% Similarity=0.137 Sum_probs=25.9
Q ss_pred ccCCCHHHHHHHHHHhCCCeEEEEcCChH
Q psy8348 382 SAHTDYQQTSEFVRELRPAHVVLVHGEQN 410 (622)
Q Consensus 382 S~Had~~el~~~i~~l~P~~VilvHGe~~ 410 (622)
..|.+.++..++++.++|+.++|+|=...
T Consensus 149 ~~h~~~~~a~~~~~~~~~k~vi~~H~~~~ 177 (220)
T 1vjn_A 149 TYTIGPKEAKEVADLLNAKVIIPMHYKTK 177 (220)
T ss_dssp SSSCCHHHHHHHHHHTTCSEEEEESCCCS
T ss_pred cCcCCHHHHHHHHHhcCCCEEEEEecccc
Confidence 45999999999999999999999996654
No 87
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=26.54 E-value=60 Score=31.83 Aligned_cols=50 Identities=12% Similarity=0.087 Sum_probs=36.2
Q ss_pred CHHHHHHHHHHhCCCeEEEEcCChHHHHHHHHHHHHhhcCCCCCceEEeeCCCCcEEEE
Q psy8348 386 DYQQTSEFVRELRPAHVVLVHGEQNEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDL 444 (622)
Q Consensus 386 d~~el~~~i~~l~P~~VilvHGe~~~~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l 444 (622)
..++..++++.++|++++|.|.....- .+.+++++.. ++..-..|.++++
T Consensus 235 ~~~~a~~~~~~~~~~~l~l~H~~~~~~---~~~~~~~~~~------~v~~a~~G~~i~l 284 (284)
T 2p4z_A 235 KVKDIARKIEEYGVKKVLTGHCTGIDE---YGFLKSVLKD------KISYLTTSSSIVV 284 (284)
T ss_dssp HHHHHHHHHHHTTBCCEEECGGGCHHH---HHHHHHHHGG------GEEECCTTCEEEC
T ss_pred HHHHHHHHHHcCCCCEEEeeCcCcHHH---HHHHHHHhCC------CEEEcCCCcEEeC
Confidence 688899999999999999999987532 2345556632 3566677777653
No 88
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=25.66 E-value=41 Score=32.29 Aligned_cols=55 Identities=13% Similarity=0.162 Sum_probs=38.6
Q ss_pred ccCCCHHHHHHHHHHhCCCeEEEEcCChHHHHHHHHHHHHhhcCCCCCceEEeeCCCCcEEEEe
Q psy8348 382 SAHTDYQQTSEFVRELRPAHVVLVHGEQNEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDLY 445 (622)
Q Consensus 382 S~Had~~el~~~i~~l~P~~VilvHGe~~~~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l~ 445 (622)
.+|.+.++..++++.++|++++++|=..+.-. ..+++.+ + .++..-..|.++++.
T Consensus 198 ~~H~~~~~a~~~~~~~~~k~lil~H~s~~~~~---~~~~~~~---~---~~v~~a~Dg~~~~~~ 252 (258)
T 3g1p_A 198 RNHCDLNTVLALNQVIRSPRVILTHISHQFDA---WLMENAL---P---SGFEVGFDGMEIGVA 252 (258)
T ss_dssp SSSCBHHHHHHHHHHHCCSCEEEESCCHHHHH---HHTTCCC---C---TTEEECCTTEEEC--
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEECccCccch---hhhhhhC---C---CCeEEccCCCEEeee
Confidence 57999999999999999999999998765321 1222211 1 247777888877764
No 89
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=25.57 E-value=1.9e+02 Score=28.34 Aligned_cols=81 Identities=17% Similarity=0.252 Sum_probs=45.2
Q ss_pred CCCCcEEEEcccCCCCCCchhh-hHHHHHHHHHHHHHHcCC-eEEEeecccchHHHH---HHHHHHHHHhC----C--CC
Q psy8348 183 PVKPDILITESTYGTHVHEQRE-EREGRFTSLIHDIVNRGG-RCLIPVFALGRAQEL---LLILDEYWSLH----P--EL 251 (622)
Q Consensus 183 ~~~~DvLI~EsTyg~~~~~~~~-~~~~~~~~~i~~~l~~gg-~vliP~falGR~qEl---l~iL~~~~~~~----~--~l 251 (622)
..++|++++|-.-. .-+...+ .|.-...+...+.++.|| ..++-+|. |-..++ +..+...+..- | .-
T Consensus 137 ~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq-g~~~~~~~~l~~lk~~F~~vkvk~paSR~ 214 (269)
T 2px2_A 137 SEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC-PYMPKVIEKLESLQRRFGGGLVRVPLSRN 214 (269)
T ss_dssp CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC-TTSHHHHHHHHHHHHHHCCEEECCTTSCT
T ss_pred CCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC-CCchHHHHHHHHHHHHcCCEEEECCCCCC
Confidence 34799999997532 1121111 111124466677889999 99999999 644444 44555555321 1 11
Q ss_pred CCccEEEECchHHH
Q psy8348 252 HDIPIYYASSLAKK 265 (622)
Q Consensus 252 ~~ipI~~~s~~a~~ 265 (622)
...-+|+.+....+
T Consensus 215 ~S~E~YlVa~~~~n 228 (269)
T 2px2_A 215 SNHEMYWVSGASGN 228 (269)
T ss_dssp TCCCEEEETTCCSC
T ss_pred CCccEEEEecccCc
Confidence 23467777654433
No 90
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=25.33 E-value=69 Score=33.29 Aligned_cols=40 Identities=18% Similarity=0.306 Sum_probs=31.3
Q ss_pred EecccCCCHHHHHHHHHHh-CCCeEEEEcCChHHHHHHHHH
Q psy8348 379 ISFSAHTDYQQTSEFVREL-RPAHVVLVHGEQNEMSRLKAA 418 (622)
Q Consensus 379 i~fS~Had~~el~~~i~~l-~P~~VilvHGe~~~~~~l~~~ 418 (622)
+-+.+|.|.+++.++++.+ .|++++.||=+.+.-..++..
T Consensus 88 flil~h~d~~~l~rll~~ly~p~n~y~IHvD~ks~~~~~~~ 128 (391)
T 2gak_A 88 YSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDRKAEESFLAA 128 (391)
T ss_dssp EEEEECSCHHHHHHHHHHHCCTTSEEEEEECTTSCHHHHHH
T ss_pred EEEEecCCHHHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHH
Confidence 4567899999999999987 899999999987643333333
No 91
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=24.40 E-value=38 Score=32.31 Aligned_cols=39 Identities=21% Similarity=0.210 Sum_probs=30.4
Q ss_pred cccCCCHHHHHHHHHHhCCCeEEEEcCChHHHHHHHHHH
Q psy8348 381 FSAHTDYQQTSEFVRELRPAHVVLVHGEQNEMSRLKAAL 419 (622)
Q Consensus 381 fS~Had~~el~~~i~~l~P~~VilvHGe~~~~~~l~~~l 419 (622)
-..|.+.++..++++.++|+.+||+|=.......+++.+
T Consensus 184 ~~~h~~~~ea~~~~~~l~~k~vip~H~~~~~~~~~~~~l 222 (235)
T 3kl7_A 184 QPYTMTVSQAAKAARMFSPKILYPYHYGDTKIGELKDAL 222 (235)
T ss_dssp TTTSCCHHHHHHHHHHHCCSEEEEESCTTCCTTHHHHHT
T ss_pred CCcccCHHHHHHHHHHcCCCEEEEEcCCCCCHHHHHHHH
Confidence 356999999999999999999999997663333444433
No 92
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=23.35 E-value=3.8e+02 Score=25.89 Aligned_cols=58 Identities=12% Similarity=0.121 Sum_probs=33.3
Q ss_pred CCCCcEEEEcccCCCCCCchh-hhHHHHHHHHHHHHHHcCC--eEEEeecccchHHHHHHHHH
Q psy8348 183 PVKPDILITESTYGTHVHEQR-EEREGRFTSLIHDIVNRGG--RCLIPVFALGRAQELLLILD 242 (622)
Q Consensus 183 ~~~~DvLI~EsTyg~~~~~~~-~~~~~~~~~~i~~~l~~gg--~vliP~falGR~qEll~iL~ 242 (622)
...+|+++++..+.. .++.. ..+...+.+.+.+.++.|| ..++-+|. ....+++..+.
T Consensus 146 ~~~fD~Vvsd~~~~~-~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~-~~~~~~~~~l~ 206 (276)
T 2wa2_A 146 PFQADTVLCDIGESN-PTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN-PYSCDVLEALM 206 (276)
T ss_dssp CCCCSEEEECCCCCC-SCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC-CCSHHHHHHHH
T ss_pred CCCcCEEEECCCcCC-CchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC-CCchhHHHHHH
Confidence 447899999865211 11111 1111125677788899999 99988887 33343333333
No 93
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=23.23 E-value=75 Score=28.46 Aligned_cols=62 Identities=18% Similarity=0.244 Sum_probs=38.9
Q ss_pred CCCcEEEEcccCCCCCCchhhh-----HHHHHHHHHHHHHHcCCeEEEeecccchHHHHHHHHHHHH
Q psy8348 184 VKPDILITESTYGTHVHEQREE-----REGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLILDEYW 245 (622)
Q Consensus 184 ~~~DvLI~EsTyg~~~~~~~~~-----~~~~~~~~i~~~l~~gg~vliP~falGR~qEll~iL~~~~ 245 (622)
..+|+++++.......+..... ....+.+.+.+.++.||++++..+......+++..+..++
T Consensus 96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~f 162 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEF 162 (196)
T ss_dssp GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHHE
T ss_pred CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHHh
Confidence 3689999865322211211111 1134566677788999999998887766677777776653
No 94
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=22.73 E-value=2.1e+02 Score=27.60 Aligned_cols=58 Identities=14% Similarity=0.173 Sum_probs=33.6
Q ss_pred CCCCcEEEEcccCCCCCCchhh-hHHHHHHHHHHHHHHcCC--eEEEeecccchHHHHHHHHH
Q psy8348 183 PVKPDILITESTYGTHVHEQRE-EREGRFTSLIHDIVNRGG--RCLIPVFALGRAQELLLILD 242 (622)
Q Consensus 183 ~~~~DvLI~EsTyg~~~~~~~~-~~~~~~~~~i~~~l~~gg--~vliP~falGR~qEll~iL~ 242 (622)
...+|+++++..+ ...+.... .+.-.+.+.+.+.++.|| ..++-+|. ....+++..+.
T Consensus 138 ~~~fD~V~sd~~~-~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~-~~~~~~~~~l~ 198 (265)
T 2oxt_A 138 VERTDVIMCDVGE-SSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC-PYSVEVMERLS 198 (265)
T ss_dssp CCCCSEEEECCCC-CCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC-TTSHHHHHHHH
T ss_pred CCCCcEEEEeCcc-cCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC-CCChhHHHHHH
Confidence 3478999998652 11111111 111125677788899999 99998887 44453333333
No 95
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=22.59 E-value=36 Score=33.81 Aligned_cols=62 Identities=18% Similarity=0.235 Sum_probs=37.7
Q ss_pred CCCcEEEEcccCCCCCCc-h-hhhHHH---HHHHHHHHHHHcCCeEEEeecccc--hHHHHHHHHHHHH
Q psy8348 184 VKPDILITESTYGTHVHE-Q-REEREG---RFTSLIHDIVNRGGRCLIPVFALG--RAQELLLILDEYW 245 (622)
Q Consensus 184 ~~~DvLI~EsTyg~~~~~-~-~~~~~~---~~~~~i~~~l~~gg~vliP~falG--R~qEll~iL~~~~ 245 (622)
.++|+++.+-.-...-|. . ..+... .+.....+.++.||+.++-+|.-| ..+++...|.+.+
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F 273 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQF 273 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTE
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhc
Confidence 469999998532222222 1 122111 122333345688999999999998 7778877776543
No 96
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=21.52 E-value=1.8e+02 Score=28.42 Aligned_cols=93 Identities=17% Similarity=0.186 Sum_probs=52.5
Q ss_pred CCCeEEEeccCCCCCcccccccCCceeeeccCeEeeceeeEEEEecccCC--CHHHHHHHHHHhCCCeEEEEcCChHHHH
Q psy8348 336 AKNGVIIAGYCVEGTLAKTILSEPEEVIGMSGQRLPLKMSVDYISFSAHT--DYQQTSEFVRELRPAHVVLVHGEQNEMS 413 (622)
Q Consensus 336 ~~n~vil~gy~~~gt~~~~l~~~~~~~~~~~g~~i~~~~~v~~i~fS~Ha--d~~el~~~i~~l~P~~VilvHGe~~~~~ 413 (622)
++-.|+++|-+-+|-.. +++.. ....| -++.+=|=.+|+..-+ ..+++.+++++++|++++|.|=....
T Consensus 171 ~~GlvvitGCsH~GI~N--iv~~a---~~~~g--~~i~~viGGfHL~~~~~~~l~~tl~~l~~~~~~~i~~~HCTg~~-- 241 (267)
T 3h3e_A 171 KEGLVVITGCSHRGIDN--ILLDI---AETFN--ERIKMVVGGFHLLKSSDDEIEKIVKAFNELGVETVVPCHCTGER-- 241 (267)
T ss_dssp TTEEEEEESCCTTCHHH--HHHHH---HTTCS--SCEEEEEEECCCTTSCHHHHHHHHHHHHHTTCCEEEEETTSCHH--
T ss_pred CCcEEEEeCCCCcCHHH--HHHHH---HHHhC--CCceEEEeccccCCCCHHHHHHHHHHHHhcCCCEEEEECCCCHH--
Confidence 34557788877777421 11111 11122 1222223345654422 23456677788899999999977543
Q ss_pred HHHHHHHHhhcCCCCCceEEeeCCCCcEEEE
Q psy8348 414 RLKAALTREYEDDPNTSMELYNPRNTVSVDL 444 (622)
Q Consensus 414 ~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l 444 (622)
....|++++. .++.....|.++++
T Consensus 242 -a~~~L~~~lp------~~v~~~~~G~~iei 265 (267)
T 3h3e_A 242 -AVDIFKREFL------GKIMDCYAGLKLEV 265 (267)
T ss_dssp -HHHHHHHHCS------SEECCCCTTCEEEE
T ss_pred -HHHHHHHHCC------CCEEEecCceEEEe
Confidence 2345666663 25666678888877
Done!