Query psy8351
Match_columns 103
No_of_seqs 130 out of 1024
Neff 7.2
Searched_HMMs 29240
Date Sat Aug 17 01:30:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8351.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8351hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iek_A Ribonuclease TTHA0252; 99.7 1.5E-16 5.3E-21 122.6 11.4 90 1-100 82-171 (431)
2 2i7t_A Cleavage and polyadenyl 99.6 1.1E-15 3.6E-20 118.1 10.0 94 1-100 95-188 (459)
3 2i7x_A Protein CFT2; polyadeny 99.6 7.9E-15 2.7E-19 119.6 11.0 96 1-102 89-190 (717)
4 3af5_A Putative uncharacterize 99.6 2.4E-14 8.1E-19 115.4 10.9 95 1-101 280-377 (651)
5 2ycb_A Beta-CAsp RNAse, cleava 99.5 3.4E-14 1.2E-18 114.1 10.3 95 1-101 265-362 (636)
6 2xr1_A Cleavage and polyadenyl 99.5 5.1E-14 1.7E-18 113.3 10.9 95 1-101 268-365 (640)
7 3zdk_A 5' exonuclease apollo; 99.0 6.9E-10 2.4E-14 83.4 7.2 54 40-99 69-129 (336)
8 4b87_A DNA cross-LINK repair 1 98.9 1E-09 3.4E-14 83.4 5.9 53 40-98 96-149 (367)
9 3zq4_A Ribonuclease J 1, RNAse 98.8 1.4E-08 4.8E-13 80.6 7.9 76 1-99 96-172 (555)
10 2az4_A Hypothetical protein EF 98.7 5.2E-09 1.8E-13 79.6 3.5 53 39-97 142-195 (429)
11 3bk2_A RNAse J, metal dependen 98.7 4.7E-08 1.6E-12 77.5 8.8 54 40-99 132-187 (562)
12 1zkp_A Hypothetical protein BA 97.9 2.8E-05 9.6E-10 55.1 6.8 50 41-96 135-184 (268)
13 3g1p_A Protein PHNP; C-P lyase 97.9 2.1E-05 7.3E-10 55.8 5.7 50 42-97 121-170 (258)
14 2e7y_A TRNAse Z; tRNA maturati 97.8 3.9E-05 1.3E-09 54.3 5.4 35 41-75 106-147 (280)
15 3m8t_A 'BLR6230 protein; subcl 97.7 9.3E-05 3.2E-09 52.7 6.2 49 43-97 155-208 (294)
16 2wyl_A L-ascorbate-6-phosphate 97.6 0.0002 6.8E-09 53.4 8.0 66 26-97 139-232 (360)
17 2r2d_A AGR_PTI_140P, Zn-depend 97.5 0.00029 1E-08 49.7 7.1 49 42-96 167-218 (276)
18 1k07_A FEZ-1 beta-lactamase; m 97.5 0.0004 1.4E-08 49.0 7.7 45 44-94 128-177 (263)
19 3kl7_A Putative metal-dependen 97.5 0.00014 4.6E-09 51.4 5.0 67 25-97 91-168 (235)
20 2p18_A Glyoxalase II; metallop 97.3 0.00042 1.4E-08 50.9 6.2 49 42-96 132-185 (311)
21 3bv6_A Metal-dependent hydrola 97.3 0.00094 3.2E-08 50.2 7.9 66 26-97 163-257 (379)
22 2xf4_A Hydroxyacylglutathione 97.2 0.00047 1.6E-08 46.8 4.6 46 43-96 110-156 (210)
23 4efz_A Metallo-beta-lactamase 97.2 0.00088 3E-08 48.4 6.2 48 43-96 125-179 (298)
24 3esh_A Protein similar to meta 97.1 0.00076 2.6E-08 48.1 5.1 43 48-97 169-212 (280)
25 1ztc_A Hypothetical protein TM 97.1 0.00064 2.2E-08 47.0 4.6 47 42-95 131-178 (221)
26 4ad9_A Lactb2, beta-lactamase- 97.0 0.0012 4E-08 47.2 5.7 48 41-96 122-170 (289)
27 3l6n_A Metallo-beta-lactamase; 97.0 0.0015 5.2E-08 44.5 5.7 61 27-95 94-162 (219)
28 1y44_A Ribonuclease Z; zinc-de 96.9 0.0012 4.1E-08 47.7 5.3 33 43-75 119-151 (320)
29 1e5d_A Rubredoxin\:oxygen oxid 96.9 0.00087 3E-08 49.8 4.5 47 41-95 121-169 (402)
30 2gcu_A Putative hydroxyacylglu 96.9 0.0015 5.2E-08 46.2 5.6 48 43-96 95-147 (245)
31 3tp9_A Beta-lactamase and rhod 96.9 0.0017 5.8E-08 49.8 6.2 49 42-96 100-154 (474)
32 3dha_A N-acyl homoserine lacto 96.9 0.0028 9.7E-08 44.1 6.5 41 50-97 160-201 (254)
33 1qh5_A Glyoxalase II, protein 96.8 0.0018 6.3E-08 46.3 5.2 47 43-95 88-138 (260)
34 2fhx_A SPM-1; metallo-beta-lac 96.8 0.0019 6.5E-08 44.7 5.2 44 44-95 143-188 (246)
35 2zo4_A Metallo-beta-lactamase 96.8 0.0025 8.6E-08 45.8 5.8 46 43-96 149-195 (317)
36 1m2x_A Class B carbapenemase B 96.8 0.0022 7.5E-08 44.0 5.2 46 43-96 112-159 (223)
37 1xm8_A Glyoxalase II; structur 96.6 0.0032 1.1E-07 44.8 5.0 46 43-96 90-136 (254)
38 1a7t_A Metallo-beta-lactamase; 96.5 0.0025 8.5E-08 44.1 4.1 44 44-95 123-168 (232)
39 1p9e_A Methyl parathion hydrol 96.5 0.0043 1.5E-07 45.5 5.6 36 54-96 225-260 (331)
40 3aj3_A MLR6805 protein, 4-pyri 96.5 0.0018 6.1E-08 45.6 3.2 41 48-95 169-211 (274)
41 2ohh_A Type A flavoprotein FPR 96.5 0.0021 7.2E-08 47.7 3.7 44 42-93 127-172 (404)
42 2qed_A Hydroxyacylglutathione 96.5 0.0033 1.1E-07 44.8 4.5 44 42-95 94-138 (258)
43 3adr_A Putative uncharacterize 96.4 0.0041 1.4E-07 43.3 4.9 44 42-95 125-169 (261)
44 1mqo_A Beta-lactamase II; alph 96.4 0.0054 1.9E-07 42.1 5.4 44 44-95 127-172 (227)
45 3r2u_A Metallo-beta-lactamase 96.4 0.0063 2.1E-07 46.9 6.2 49 42-96 120-174 (466)
46 1ycg_A Nitric oxide reductase; 96.3 0.004 1.4E-07 46.1 4.5 46 41-94 122-169 (398)
47 2cbn_A Ribonuclease Z; phospho 96.3 0.012 4E-07 42.0 6.8 34 42-75 120-153 (306)
48 2vw8_A PA1000, PQSE; quinolone 96.3 0.0048 1.6E-07 44.2 4.7 42 44-93 139-182 (303)
49 1vjn_A Zn-dependent hydrolase 96.2 0.008 2.7E-07 41.9 5.4 44 48-97 79-129 (220)
50 3rpc_A Possible metal-dependen 96.2 0.0062 2.1E-07 43.1 4.8 67 25-97 89-174 (264)
51 4hl2_A Beta-lactamase NDM-1; s 96.2 0.0011 3.9E-08 46.1 0.7 42 46-95 144-185 (243)
52 2q9u_A A-type flavoprotein; fl 96.1 0.0036 1.2E-07 46.8 3.1 46 41-94 127-174 (414)
53 2y8b_A Metallo-B-lactamase; hy 96.0 0.0088 3E-07 42.4 4.5 42 47-96 161-202 (265)
54 3md7_A Beta-lactamase-like; ss 95.8 0.0039 1.3E-07 44.9 2.3 44 42-95 165-213 (293)
55 1sml_A Protein (penicillinase) 95.6 0.05 1.7E-06 38.1 7.4 46 44-95 139-188 (269)
56 3hnn_A Putative diflavin flavo 95.4 0.019 6.6E-07 40.4 4.5 44 41-92 129-175 (262)
57 4ax1_B Metallo-beta-lactamase 95.2 0.062 2.1E-06 37.8 6.8 35 42-76 159-194 (303)
58 3jxp_A Coenzyme PQQ synthesis 95.1 0.026 8.8E-07 41.6 4.6 49 42-96 140-206 (321)
59 2p97_A Hypothetical protein; p 94.9 0.017 5.7E-07 39.1 2.9 34 54-96 109-142 (201)
60 2zwr_A Metallo-beta-lactamase 94.5 0.021 7.1E-07 38.6 2.6 34 54-96 116-149 (207)
61 4dik_A Flavoprotein; TM0755, e 94.3 0.057 1.9E-06 41.2 4.8 44 41-94 138-183 (410)
62 1jjt_A IMP-1 metallo beta-lact 94.0 0.015 5.3E-07 39.9 1.1 40 48-95 121-162 (228)
63 2bib_A CBPE, teichoic acid pho 93.6 0.17 5.9E-06 39.3 6.4 45 45-95 149-207 (547)
64 3iog_A Beta-lactamase; hydrola 91.4 0.056 1.9E-06 36.5 1.0 39 47-94 128-168 (227)
65 2cfu_A SDSA1; SDS-hydrolase, l 91.4 0.21 7.2E-06 40.2 4.4 42 48-97 262-305 (658)
66 3q6v_A Beta-lactamase; metallo 90.0 0.2 7E-06 33.8 2.8 35 53-96 139-173 (233)
67 3zwf_A Zinc phosphodiesterase 88.5 0.74 2.5E-05 34.2 5.1 25 52-76 168-192 (368)
68 4eyb_A Beta-lactamase NDM-1; m 84.2 0.8 2.7E-05 32.2 3.2 37 53-97 178-214 (270)
69 2yhe_A SEC-alkyl sulfatase; hy 82.2 0.3 1E-05 39.6 0.0 42 47-96 272-315 (668)
70 1wv9_A Rhodanese homolog TT165 70.4 1.2 4.1E-05 26.2 0.6 14 60-73 28-41 (94)
71 3eme_A Rhodanese-like domain p 69.4 0.96 3.3E-05 27.1 -0.0 14 60-73 30-43 (103)
72 3g5j_A Putative ATP/GTP bindin 69.0 0.72 2.5E-05 28.5 -0.7 14 60-73 29-42 (134)
73 3i2v_A Adenylyltransferase and 68.1 0.76 2.6E-05 28.2 -0.7 14 60-73 29-42 (127)
74 3iwh_A Rhodanese-like domain p 67.8 1.1 3.7E-05 27.4 -0.0 12 60-71 30-41 (103)
75 3foj_A Uncharacterized protein 67.6 1.1 3.8E-05 26.7 -0.0 14 60-73 30-43 (100)
76 3utn_X Thiosulfate sulfurtrans 65.2 1.8 6.1E-05 32.0 0.7 12 61-72 227-238 (327)
77 3hix_A ALR3790 protein; rhodan 65.1 1.1 3.7E-05 27.1 -0.4 14 60-73 25-38 (106)
78 1gmx_A GLPE protein; transfera 64.8 0.83 2.8E-05 27.6 -1.0 13 60-72 32-44 (108)
79 2j6p_A SB(V)-AS(V) reductase; 64.0 1.4 4.9E-05 28.4 0.0 14 60-73 35-48 (152)
80 2k0z_A Uncharacterized protein 63.7 1.2 4.2E-05 27.0 -0.3 14 60-73 28-41 (110)
81 3gk5_A Uncharacterized rhodane 63.6 1.5 5E-05 26.7 -0.0 14 60-73 29-42 (108)
82 2jtq_A Phage shock protein E; 62.6 1 3.5E-05 25.9 -0.8 13 60-72 13-25 (85)
83 2ouc_A Dual specificity protei 62.2 0.79 2.7E-05 28.5 -1.5 15 59-73 35-49 (142)
84 3f4a_A Uncharacterized protein 59.5 2 6.7E-05 28.5 0.0 45 27-72 31-76 (169)
85 1c25_A CDC25A; hydrolase, cell 59.5 1.6 5.4E-05 28.2 -0.4 47 26-73 22-69 (161)
86 1hzm_A Dual specificity protei 58.7 0.81 2.8E-05 29.3 -2.0 15 59-73 44-58 (154)
87 3d1p_A Putative thiosulfate su 58.4 1.5 5.1E-05 27.6 -0.7 43 26-72 22-64 (139)
88 1whb_A KIAA0055; deubiqutinati 57.9 1.9 6.6E-05 27.9 -0.2 15 59-73 43-57 (157)
89 2a2k_A M-phase inducer phospha 57.8 1.8 6E-05 28.4 -0.4 47 26-73 23-70 (175)
90 2wlr_A Putative thiosulfate su 57.7 2.7 9.1E-05 31.6 0.5 14 60-73 40-53 (423)
91 2vsw_A Dual specificity protei 54.6 1.6 5.6E-05 27.8 -1.0 14 60-73 33-46 (153)
92 1tq1_A AT5G66040, senescence-a 53.9 2.1 7.1E-05 26.8 -0.6 41 26-73 17-57 (129)
93 2eg4_A Probable thiosulfate su 53.5 2 7E-05 29.3 -0.7 15 60-74 18-32 (230)
94 1t3k_A Arath CDC25, dual-speci 53.3 3.2 0.00011 26.8 0.3 15 59-73 54-68 (152)
95 1qb0_A Protein (M-phase induce 49.7 2.9 9.9E-05 28.5 -0.4 14 60-73 77-90 (211)
96 2gwf_A Ubiquitin carboxyl-term 49.6 2.5 8.7E-05 27.4 -0.7 41 27-72 20-61 (157)
97 3nhv_A BH2092 protein; alpha-b 49.2 2.6 8.8E-05 27.0 -0.7 14 60-73 45-58 (144)
98 3tg1_B Dual specificity protei 48.3 2.8 9.6E-05 27.1 -0.6 16 59-74 45-60 (158)
99 3flh_A Uncharacterized protein 48.0 3.1 0.00011 25.7 -0.4 13 60-72 45-57 (124)
100 3olh_A MST, 3-mercaptopyruvate 48.0 2.8 9.6E-05 30.1 -0.7 14 59-72 61-74 (302)
101 3ilm_A ALR3790 protein; rhodan 47.2 2.5 8.6E-05 27.0 -1.0 14 60-73 29-42 (141)
102 2hhg_A Hypothetical protein RP 47.1 2.9 0.0001 26.1 -0.7 40 27-72 22-64 (139)
103 3aay_A Putative thiosulfate su 46.9 3.6 0.00012 28.7 -0.3 15 59-73 33-47 (277)
104 1urh_A 3-mercaptopyruvate sulf 46.3 3 0.0001 29.2 -0.7 14 60-73 41-54 (280)
105 3hzu_A Thiosulfate sulfurtrans 44.2 4.7 0.00016 29.1 -0.0 14 60-73 68-81 (318)
106 1uar_A Rhodanese; sulfurtransf 43.4 4.4 0.00015 28.4 -0.3 15 59-73 35-49 (285)
107 3op3_A M-phase inducer phospha 42.6 4.2 0.00015 28.2 -0.5 43 28-73 58-103 (216)
108 1e0c_A Rhodanese, sulfurtransf 41.9 4 0.00014 28.4 -0.7 15 59-73 35-49 (271)
109 1rhs_A Sulfur-substituted rhod 41.2 4.1 0.00014 28.9 -0.7 16 59-74 46-61 (296)
110 4h62_V Mediator of RNA polymer 39.7 14 0.0005 17.5 1.3 16 27-42 7-22 (31)
111 1okg_A Possible 3-mercaptopyru 37.3 4.6 0.00016 30.0 -1.0 15 60-74 47-61 (373)
112 3njn_A Peptidase; structural g 32.0 57 0.0019 20.8 3.6 31 45-75 71-106 (119)
113 2i7t_A Cleavage and polyadenyl 31.2 77 0.0026 23.6 4.9 27 54-80 11-37 (459)
114 3oka_C N-terminal His-affinity 24.6 19 0.00066 15.6 0.3 8 60-67 12-19 (21)
115 2az4_A Hypothetical protein EF 23.9 1.4E+02 0.0048 21.8 5.2 27 54-80 6-32 (429)
116 1bh9_B TAFII28; histone fold, 22.5 1.3E+02 0.0045 17.8 4.4 37 6-42 47-83 (89)
117 1lbj_A Motilin; A-helix, B-tur 21.5 75 0.0026 14.7 2.0 15 26-40 2-16 (26)
118 1yt8_A Thiosulfate sulfurtrans 21.2 20 0.00067 27.8 -0.1 38 27-72 7-47 (539)
No 1
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.69 E-value=1.5e-16 Score=122.55 Aligned_cols=90 Identities=19% Similarity=0.350 Sum_probs=84.4
Q ss_pred CCHHHHHHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHhhcccccCCcEEEeCCEEEEEEeCCccccceEEEEEECCeEE
Q psy8351 1 MTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKI 80 (103)
Q Consensus 1 ~T~~T~~l~~~lL~D~~ki~~~~~~~p~y~~~dv~~~~~~~~~v~y~~~~~i~~~~v~~~~AGHIlGsa~~~i~~~~~~i 80 (103)
||++|+++++.++.|+.+++.. |+|+.+|+++++.++++++|+++++++++++++++|||++||+++.|+.++.++
T Consensus 82 ~t~~t~~l~~~~l~d~~~~~~~----~~y~~~~~~~~~~~~~~l~~~~~~~l~g~~v~~~~agH~~Gs~~~~i~~~~~~i 157 (431)
T 3iek_A 82 ATRATVLLMEIVLEDALKVMDE----PFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQAGHLPGSAFVVAQGEGRTL 157 (431)
T ss_dssp ECHHHHHHHHHHHHHHHHHCSS----CSSCHHHHHHHHHTEEECCTTCCEEETTEEEEEEECCSSTTCEEEEEEETTEEE
T ss_pred EcHHHHHHHHHHHHHHHhhccc----CCCCHHHHHHHHhccEEcCCCCeEEeCCEEEEEEeCCCCcCceEEEEEECCEEE
Confidence 6899999999999999988752 889999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeeEEEecCCCCCccce
Q psy8351 81 ARYLFLWYQVNVNQNNQEFR 100 (103)
Q Consensus 81 ~~~~~~~ysgD~~~~~~~~~ 100 (103)
+||||++..+++++
T Consensus 158 ------lfsGD~~~~~~~~l 171 (431)
T 3iek_A 158 ------VYSGDLGNREKDVL 171 (431)
T ss_dssp ------EECCCCCCTTSSSS
T ss_pred ------EEeCCCCCCCCccc
Confidence 99999998887765
No 2
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.63 E-value=1.1e-15 Score=118.06 Aligned_cols=94 Identities=71% Similarity=1.098 Sum_probs=76.3
Q ss_pred CCHHHHHHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHhhcccccCCcEEEeCCEEEEEEeCCccccceEEEEEECCeEE
Q psy8351 1 MTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKI 80 (103)
Q Consensus 1 ~T~~T~~l~~~lL~D~~ki~~~~~~~p~y~~~dv~~~~~~~~~v~y~~~~~i~~~~v~~~~AGHIlGsa~~~i~~~~~~i 80 (103)
||++|+++++.++.|+++++......++|+.+++..+..++++++|+++++++|+++++++|||++||+++.|+.++.++
T Consensus 95 ~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~GH~~Gs~~~~i~~~~~~i 174 (459)
T 2i7t_A 95 MTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKL 174 (459)
T ss_dssp EEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEETTEEEEEEECCSSTTCEEEEEEETTEEE
T ss_pred echHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHhccEEeCCCCEEEECCEEEEEEeCCCccCcEEEEEEECCcEE
Confidence 57899999999999999887655556889999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeeEEEecCCCCCccce
Q psy8351 81 ARYLFLWYQVNVNQNNQEFR 100 (103)
Q Consensus 81 ~~~~~~~ysgD~~~~~~~~~ 100 (103)
+||||++..++...
T Consensus 175 ------l~sGD~~~~~~~~~ 188 (459)
T 2i7t_A 175 ------LYTGDFSRQEDRHL 188 (459)
T ss_dssp ------EECCSCCCC-----
T ss_pred ------EEeCCCCCCCCccc
Confidence 99999998776543
No 3
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.59 E-value=7.9e-15 Score=119.55 Aligned_cols=96 Identities=21% Similarity=0.257 Sum_probs=84.3
Q ss_pred CCHHHHHHHHHHHHHHHhhhhcCCCC--CCCCHHHHHHHHhhcccccCCcEEEe----CCEEEEEEeCCccccceEEEEE
Q psy8351 1 MTHATKAIYRWLLSDYIKVSNISTEQ--MLYTESDLEKSMDKIETINFHEEKDV----NGIKFSAYNAGHVLGAAMFLIE 74 (103)
Q Consensus 1 ~T~~T~~l~~~lL~D~~ki~~~~~~~--p~y~~~dv~~~~~~~~~v~y~~~~~i----~~~~v~~~~AGHIlGsa~~~i~ 74 (103)
||++|+++++.+|.|+++........ ++|+.+++..++.++++++|++++++ ++++|++++|||++||+++.|+
T Consensus 89 ~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~~ggi~V~~~~aGHs~Gs~~~~I~ 168 (717)
T 2i7x_A 89 ATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYNAGVCPGGSIWCIS 168 (717)
T ss_dssp EEHHHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEECSSSTTCEEEEEE
T ss_pred ecchhHHHHHHHHHHHHHhhccccccccccccHHHHHhhhhceEEecCCCEEEEeecCCCEEEEEECCCCCCCcEEEEEE
Confidence 57899999999999998876533222 57899999999999999999999999 8999999999999999999999
Q ss_pred ECCeEEEeeeeeEEEecCCCCCccceeC
Q psy8351 75 IAGVKIARYLFLWYQVNVNQNNQEFRIG 102 (103)
Q Consensus 75 ~~~~~i~~~~~~~ysgD~~~~~~~~~~g 102 (103)
.++.++ +||||++....+++.+
T Consensus 169 ~~~~~I------vytGD~~~~~~~~l~~ 190 (717)
T 2i7x_A 169 TYSEKL------VYAKRWNHTRDNILNA 190 (717)
T ss_dssp CSSCEE------EECSSCCSSCCSSCCC
T ss_pred eCCCEE------EEECCCCCCcccccCc
Confidence 998899 9999999887776543
No 4
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.55 E-value=2.4e-14 Score=115.36 Aligned_cols=95 Identities=22% Similarity=0.381 Sum_probs=85.6
Q ss_pred CCHHHHHHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHhhcccccCCcEEEe-CCEEEEEEeCCccccceEEEEEECCe-
Q psy8351 1 MTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDV-NGIKFSAYNAGHVLGAAMFLIEIAGV- 78 (103)
Q Consensus 1 ~T~~T~~l~~~lL~D~~ki~~~~~~~p~y~~~dv~~~~~~~~~v~y~~~~~i-~~~~v~~~~AGHIlGsa~~~i~~~~~- 78 (103)
||++|+++++.++.|+++++..++..++|+.+++.++..+++++++++++++ ++++++++++||++||+++.++.++.
T Consensus 280 ~t~~t~~ll~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~Gs~~~~i~~~~~~ 359 (651)
T 3af5_A 280 TTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGHILGSAIVHLHIGNGL 359 (651)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSSTTCEEEEEEETTTT
T ss_pred EcHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHhhhcEEEeCCCCEEEecCCEEEEEecCCCCcCcEEEEEEECCCc
Confidence 5899999999999999998765555678999999999889999999999999 99999999999999999999999877
Q ss_pred -EEEeeeeeEEEecCCCCCcccee
Q psy8351 79 -KIARYLFLWYQVNVNQNNQEFRI 101 (103)
Q Consensus 79 -~i~~~~~~~ysgD~~~~~~~~~~ 101 (103)
++ +||||++..++++++
T Consensus 360 ~~i------lftGD~~~~~~~ll~ 377 (651)
T 3af5_A 360 HNI------AITGDFKFIPTRLLE 377 (651)
T ss_dssp TCE------EECCSCCCSCCSSCC
T ss_pred eEE------EEeCCCCCCcccccc
Confidence 88 999999988876654
No 5
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.53 E-value=3.4e-14 Score=114.08 Aligned_cols=95 Identities=23% Similarity=0.378 Sum_probs=85.1
Q ss_pred CCHHHHHHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHhhcccccCCcEEEe-CCEEEEEEeCCccccceEEEEEECCe-
Q psy8351 1 MTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDV-NGIKFSAYNAGHVLGAAMFLIEIAGV- 78 (103)
Q Consensus 1 ~T~~T~~l~~~lL~D~~ki~~~~~~~p~y~~~dv~~~~~~~~~v~y~~~~~i-~~~~v~~~~AGHIlGsa~~~i~~~~~- 78 (103)
||++|+++++.++.|+++++..++..++|+.++++++..++.++++++++++ +|++++++++||++||+++.++.++.
T Consensus 265 ~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~Gs~~~~i~~~~~~ 344 (636)
T 2ycb_A 265 CTAPTRDLMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNAGHILGSAMAHLHIGDGQ 344 (636)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECCSSTTCEEEEEEETTTT
T ss_pred EcchHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHhceEEeCCCCEEEecCCeEEEEeCCCCCCCcEEEEEEECCCe
Confidence 5899999999999999988765455678999999999999999999999999 99999999999999999999999887
Q ss_pred -EEEeeeeeEEEecCCCCCcccee
Q psy8351 79 -KIARYLFLWYQVNVNQNNQEFRI 101 (103)
Q Consensus 79 -~i~~~~~~~ysgD~~~~~~~~~~ 101 (103)
++ +||||++...+++++
T Consensus 345 ~~i------lftGD~~~~~~~ll~ 362 (636)
T 2ycb_A 345 HNM------VYTGDFKYEQSRLLE 362 (636)
T ss_dssp TCE------EECCSCCSSCCSSSC
T ss_pred EEE------EEECCCCCCcccccC
Confidence 88 999999988776554
No 6
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.53 E-value=5.1e-14 Score=113.30 Aligned_cols=95 Identities=22% Similarity=0.359 Sum_probs=85.1
Q ss_pred CCHHHHHHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHhhcccccCCcEEEe-CCEEEEEEeCCccccceEEEEEECCe-
Q psy8351 1 MTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDV-NGIKFSAYNAGHVLGAAMFLIEIAGV- 78 (103)
Q Consensus 1 ~T~~T~~l~~~lL~D~~ki~~~~~~~p~y~~~dv~~~~~~~~~v~y~~~~~i-~~~~v~~~~AGHIlGsa~~~i~~~~~- 78 (103)
||++|.++++.++.|+++++..++..++|+.+++.++..+++++++++++++ ++++++++++||++||+++.++.++.
T Consensus 268 ~t~~t~~ll~~~l~d~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~g~~i~l~gg~~v~~~~~GH~~Gs~~~~i~~~~~~ 347 (640)
T 2xr1_A 268 CTPPTRDLMVLLQLDYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAGHILGSAISHFHIGDGL 347 (640)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSSTTCEEEEEEETTTT
T ss_pred ECHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHHhceEEeCCCCEEEecCCEEEEEEcCCCCcCcEEEEEEECCce
Confidence 5899999999999999988765455678999999999999999999999999 99999999999999999999999887
Q ss_pred -EEEeeeeeEEEecCCCCCcccee
Q psy8351 79 -KIARYLFLWYQVNVNQNNQEFRI 101 (103)
Q Consensus 79 -~i~~~~~~~ysgD~~~~~~~~~~ 101 (103)
++ +||||++...++++.
T Consensus 348 ~~i------lftGD~~~~~~~ll~ 365 (640)
T 2xr1_A 348 HNV------VFTGDYKYEKTRLFD 365 (640)
T ss_dssp EEE------EECCSCCSSCCSSCC
T ss_pred EEE------EEECCCCCCCccccc
Confidence 88 999999987776554
No 7
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=99.01 E-value=6.9e-10 Score=83.43 Aligned_cols=54 Identities=20% Similarity=0.255 Sum_probs=47.9
Q ss_pred hcccccCCcEEEe-------CCEEEEEEeCCccccceEEEEEECCeEEEeeeeeEEEecCCCCCccc
Q psy8351 40 KIETINFHEEKDV-------NGIKFSAYNAGHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQNNQEF 99 (103)
Q Consensus 40 ~~~~v~y~~~~~i-------~~~~v~~~~AGHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~~~~~ 99 (103)
.+.++++++++.+ ++++|+++++||++||+++.|+.+++++ +||||++...+.+
T Consensus 69 ~~~~~~~~~~~~i~~~~~~~g~~~v~~~~~~H~~gs~~~~i~~~~~~i------~~tGD~~~~~~~~ 129 (336)
T 3zdk_A 69 WIQALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFGTI------LYTGDFRYTPSML 129 (336)
T ss_dssp TEEECCTTSEEEEESSSSSSCEEEEEEEECSSSTTCEEEEEEETTEEE------EECCSCCCCGGGG
T ss_pred ceEecCCCCeEEecCcccccCCEEEEEEECCCCcceEEEEEEeCCceE------EEeCCCCCCcccc
Confidence 4578889998876 7899999999999999999999999999 9999999877653
No 8
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=98.94 E-value=1e-09 Score=83.36 Aligned_cols=53 Identities=26% Similarity=0.342 Sum_probs=47.4
Q ss_pred hcccccCCcEEEeCCEEEEEEeCCccccceEEEEEE-CCeEEEeeeeeEEEecCCCCCcc
Q psy8351 40 KIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEI-AGVKIARYLFLWYQVNVNQNNQE 98 (103)
Q Consensus 40 ~~~~v~y~~~~~i~~~~v~~~~AGHIlGsa~~~i~~-~~~~i~~~~~~~ysgD~~~~~~~ 98 (103)
.+.++++++++++++++|++++|||++||+++.|+. ++.++ +||||++..++.
T Consensus 96 ~~~~l~~g~~~~ig~~~v~~~~agH~~gs~~~~i~~~~g~~i------l~tGD~~~~~~~ 149 (367)
T 4b87_A 96 YIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVI------LHTGDFRADPSM 149 (367)
T ss_dssp GEEECCBTSCEEETTEEEEEEECSSSTTCEEEEEECTTSCEE------EECCSCCCCGGG
T ss_pred eEEEeCCCCEEEECCEEEEEEeCCCcCCcEEEEEEcCCCcEE------EEecCcccCccc
Confidence 467889999999999999999999999999999997 56678 999999988754
No 9
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=98.79 E-value=1.4e-08 Score=80.61 Aligned_cols=76 Identities=9% Similarity=0.012 Sum_probs=60.6
Q ss_pred CCHHHHHHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHhhcccccCCcEEEeCCEEEEEEeCCc-cccceEEEEEECCeE
Q psy8351 1 MTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGH-VLGAAMFLIEIAGVK 79 (103)
Q Consensus 1 ~T~~T~~l~~~lL~D~~ki~~~~~~~p~y~~~dv~~~~~~~~~v~y~~~~~i~~~~v~~~~AGH-IlGsa~~~i~~~~~~ 79 (103)
||++|+++++..+.+.... + -..+..++++++++++++++++++++| ++||+++.|+.++.+
T Consensus 96 ~t~~t~~ll~~~l~~~~~~-------~----------~~~~~~v~~g~~~~ig~~~v~~~~~~H~~pgs~~~~i~~~~~~ 158 (555)
T 3zq4_A 96 GGKLAIGLLRNKLEEHGLL-------R----------QTKLNIIGEDDIVKFRKTAVSFFRTTHSIPDSYGIVVKTPPGN 158 (555)
T ss_dssp ECHHHHHHHHHHHHHHSTT-------T----------TCCEEECCTTCCEEETTEEEEEEEEBCSSSSEEEEEEEETTEE
T ss_pred ECHHHHHHHHHHHHHcCcc-------C----------CCceEEeCCCCEEEECCEEEEEEeCCCCCcCcEEEEEEECCcE
Confidence 4667777766666553211 0 025678899999999999999999999 999999999999999
Q ss_pred EEeeeeeEEEecCCCCCccc
Q psy8351 80 IARYLFLWYQVNVNQNNQEF 99 (103)
Q Consensus 80 i~~~~~~~ysgD~~~~~~~~ 99 (103)
+ +||||+....+++
T Consensus 159 i------l~tGD~~~~~~~~ 172 (555)
T 3zq4_A 159 I------VHTGDFKFDFTPV 172 (555)
T ss_dssp E------EECCSCBCCSSCS
T ss_pred E------EEeCCCCCCCCcC
Confidence 9 9999999887754
No 10
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=98.73 E-value=5.2e-09 Score=79.60 Aligned_cols=53 Identities=19% Similarity=0.247 Sum_probs=47.6
Q ss_pred hhcccccCCcEEEeCCEEEEEEeCCc-cccceEEEEEECCeEEEeeeeeEEEecCCCCCc
Q psy8351 39 DKIETINFHEEKDVNGIKFSAYNAGH-VLGAAMFLIEIAGVKIARYLFLWYQVNVNQNNQ 97 (103)
Q Consensus 39 ~~~~~v~y~~~~~i~~~~v~~~~AGH-IlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~~~ 97 (103)
..+..+++++++++++++|+++++|| ++||+.+.|+.++.++ +||||+...+.
T Consensus 142 ~~~~~~~~g~~~~~g~~~v~~~~~~H~~~gs~~~~i~~~~~~i------~~tGD~~~~~~ 195 (429)
T 2az4_A 142 REMIGLNKNDVIKVGEISVEIVPVDHDAYGASALLIRTPDHFI------TYTGDLRLHGH 195 (429)
T ss_dssp CCCEEECTTCEEEETTEEEEEEECCCSSTTCEEEEEEETTEEE------EECCSCCSSST
T ss_pred ceEEEeCCCCeEEECCEEEEEEECCCCChhhEEEEEEeCCcEE------EECCCcccCCC
Confidence 35667889999999999999999999 9999999999999999 99999987653
No 11
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=98.72 E-value=4.7e-08 Score=77.46 Aligned_cols=54 Identities=9% Similarity=0.117 Sum_probs=48.5
Q ss_pred hcccccCCcEEEeCC-EEEEEEeCCc-cccceEEEEEECCeEEEeeeeeEEEecCCCCCccc
Q psy8351 40 KIETINFHEEKDVNG-IKFSAYNAGH-VLGAAMFLIEIAGVKIARYLFLWYQVNVNQNNQEF 99 (103)
Q Consensus 40 ~~~~v~y~~~~~i~~-~~v~~~~AGH-IlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~~~~~ 99 (103)
.+.++++++++++++ ++|++++++| ++||+++.|+.++.++ +||||+...+.++
T Consensus 132 ~~~~v~~g~~~~lg~~~~v~~~~~~H~~~gs~~~~i~~~~~~i------l~tGD~~~~~~~~ 187 (562)
T 3bk2_A 132 NLKEISPDDRIQVGRYFTLDLFRMTHSIPDNSGVVIRTPIGTI------VHTGDFKLDPTPI 187 (562)
T ss_dssp EEEEECTTCEEEETTTEEEEEEECCCSSSSCEEEEEEETTEEE------EECCSCCCCSSCT
T ss_pred eEEEECCCCEEEeCCCEEEEEEECCCCCcccEEEEEEECCeEE------EEcCCCCCCCCCC
Confidence 466888999999998 9999999999 9999999999999999 9999998876543
No 12
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=97.91 E-value=2.8e-05 Score=55.11 Aligned_cols=50 Identities=12% Similarity=0.022 Sum_probs=43.9
Q ss_pred cccccCCcEEEeCCEEEEEEeCCccccceEEEEEECCeEEEeeeeeEEEecCCCCC
Q psy8351 41 IETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQNN 96 (103)
Q Consensus 41 ~~~v~y~~~~~i~~~~v~~~~AGHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~~ 96 (103)
+..++-++++++++++|+++++.|.+|+..+.++.+++++ +||||....+
T Consensus 135 ~~~~~~g~~~~~g~~~v~~~~~~H~~~~~~~~i~~~~~~i------~~~GD~~~~~ 184 (268)
T 1zkp_A 135 GIPYNPEETLQIGPFSISFLKTVHPVTCFAMRITAGNDIV------VYSADSSYIP 184 (268)
T ss_dssp EEECCTTSCEEETTEEEEEEECCSSSCCEEEEEEETTEEE------EECCSCCCCT
T ss_pred eEEecCCCeEEECCEEEEEEECCCCCCceEEEEEECCeEE------EEeCCCCCCH
Confidence 3456667788999999999999999999999999989999 9999998754
No 13
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=97.88 E-value=2.1e-05 Score=55.78 Aligned_cols=50 Identities=14% Similarity=0.167 Sum_probs=45.0
Q ss_pred ccccCCcEEEeCCEEEEEEeCCccccceEEEEEECCeEEEeeeeeEEEecCCCCCc
Q psy8351 42 ETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQNNQ 97 (103)
Q Consensus 42 ~~v~y~~~~~i~~~~v~~~~AGHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~~~ 97 (103)
.+++.++++++++++|+++++.|.+|+..+.|+.+++++ +||||.+..++
T Consensus 121 ~~~~~g~~~~~g~~~v~~~~~~H~~~~~g~~i~~~~~~i------~~~GDt~~~~~ 170 (258)
T 3g1p_A 121 HTVEPFVVFDLQGLQVTPLPLNHSKLTFGYLLETAHSRV------AWLSDTAGLPE 170 (258)
T ss_dssp EECCTTCCEEETTEEEEEEECCSSSCCEEEEEECSSCEE------EEECSCSSCCH
T ss_pred cccCCCCeEEECCEEEEEEECCCCCCceEEEEEeCCcEE------EEECCCCCCCH
Confidence 466778889999999999999999999999999989999 99999997665
No 14
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=97.76 E-value=3.9e-05 Score=54.27 Aligned_cols=35 Identities=11% Similarity=0.053 Sum_probs=30.0
Q ss_pred cccccCCcEEEeC-----CEEEEEEeCCcccc--ceEEEEEE
Q psy8351 41 IETINFHEEKDVN-----GIKFSAYNAGHVLG--AAMFLIEI 75 (103)
Q Consensus 41 ~~~v~y~~~~~i~-----~~~v~~~~AGHIlG--sa~~~i~~ 75 (103)
+..++.+++++++ +++|+++++||.+| +..+.|+.
T Consensus 106 ~~~~~~g~~~~~g~~~~~~~~v~~~~~~H~~~~~~~g~~i~~ 147 (280)
T 2e7y_A 106 VHPLKEGERVFLRNAGGFKRYVQPFRTKHVSSEVSFGYHIFE 147 (280)
T ss_dssp EEEECTTCCEECCCSSCSCEEEEEEECCSCSSSCCEEEEEEE
T ss_pred EEEcCCCCEEEeCCcccCCEEEEEEEccCCCCCceEEEEEEE
Confidence 4456677888897 89999999999999 99999974
No 15
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=97.66 E-value=9.3e-05 Score=52.71 Aligned_cols=49 Identities=8% Similarity=0.169 Sum_probs=39.9
Q ss_pred cccCCcEEEeCCEEEEEEe-CCccccceEEEEEECCe----EEEeeeeeEEEecCCCCCc
Q psy8351 43 TINFHEEKDVNGIKFSAYN-AGHVLGAAMFLIEIAGV----KIARYLFLWYQVNVNQNNQ 97 (103)
Q Consensus 43 ~v~y~~~~~i~~~~v~~~~-AGHIlGsa~~~i~~~~~----~i~~~~~~~ysgD~~~~~~ 97 (103)
.+.-++.+++++.+++++. .||.+|++.+.++.++. ++ +|+||....+.
T Consensus 155 ~~~~g~~~~~g~~~i~~~~~pgHt~g~~~~~~~~~~~~~~~~~------lf~GD~~~~~~ 208 (294)
T 3m8t_A 155 AVKEGDRVTLGDTTLTAHATPGHSPGCTSWEMTVKDGKEDREV------LFFCSGTVALN 208 (294)
T ss_dssp EECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEE------EECCCCCCTTC
T ss_pred EeCCCCEEEeCCEEEEEEeCCCCCccCEEEEEEccCCCccceE------EEEcCccCCCC
Confidence 4556788889999999988 78999999999987554 67 99999975543
No 16
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=97.65 E-value=0.0002 Score=53.36 Aligned_cols=66 Identities=14% Similarity=0.110 Sum_probs=49.0
Q ss_pred CCCCCHHHHHHHHh-------hcccccCCcEEEeCCEEEEEEeCCc------------ccc---------ceEEEEEECC
Q psy8351 26 QMLYTESDLEKSMD-------KIETINFHEEKDVNGIKFSAYNAGH------------VLG---------AAMFLIEIAG 77 (103)
Q Consensus 26 ~p~y~~~dv~~~~~-------~~~~v~y~~~~~i~~~~v~~~~AGH------------IlG---------sa~~~i~~~~ 77 (103)
.+.|..+...+.+. ++..++.++++++++++|+++++-| .+| ++.+.|+.++
T Consensus 139 ~~v~~p~~~~~~l~~~g~~~~~~~~l~~g~~~~~g~~~v~~~~~~H~~~~~~~~~~~h~~g~~~~~~~~~~~g~~i~~~g 218 (360)
T 2wyl_A 139 VPFIGPKTCVDLWIGWGVPKERCIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPG 218 (360)
T ss_dssp CCEEECHHHHHHHHHHTCCGGGEEECCTTCEEEETTEEEEEEECCCC------------------CCTTTBEEEEEEETT
T ss_pred CEEEEcHHHHHHHHHcCCChheEEEcCCCCEEEECCEEEEEEeccCcccccccccccccccccccccCcccEEEEEEECC
Confidence 45565555555553 4566778889999999999999954 334 7888999999
Q ss_pred eEEEeeeeeEEEecCCCCCc
Q psy8351 78 VKIARYLFLWYQVNVNQNNQ 97 (103)
Q Consensus 78 ~~i~~~~~~~ysgD~~~~~~ 97 (103)
.++ +|+||......
T Consensus 219 ~~i------~~sGDt~~~~~ 232 (360)
T 2wyl_A 219 GSL------YHSGDSHYSNY 232 (360)
T ss_dssp EEE------EECTTCCCCTT
T ss_pred cEE------EEeCCCCcCHH
Confidence 999 99999987653
No 17
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=97.52 E-value=0.00029 Score=49.72 Aligned_cols=49 Identities=10% Similarity=0.271 Sum_probs=39.9
Q ss_pred cccc-CCcEEEeC-CEEEEEEeCCccccceEEEEEECC-eEEEeeeeeEEEecCCCCC
Q psy8351 42 ETIN-FHEEKDVN-GIKFSAYNAGHVLGAAMFLIEIAG-VKIARYLFLWYQVNVNQNN 96 (103)
Q Consensus 42 ~~v~-y~~~~~i~-~~~v~~~~AGHIlGsa~~~i~~~~-~~i~~~~~~~ysgD~~~~~ 96 (103)
..++ +++.++++ ++++.....||.+|++.+.++.++ .++ +|+||.....
T Consensus 167 ~~~~~~g~~~~l~~~~~v~~~~pgHt~g~~~~~~~~~~~~~v------l~~GD~~~~~ 218 (276)
T 2r2d_A 167 DLVGRDERERELAPGVNLLNFGTGHASGMLGLAVRLEKQPGF------LLVSDACYTA 218 (276)
T ss_dssp EEECTTCCEEEEETTEEEEEEESSSSSSEEEEEEECSSSCEE------EEEETTSCCH
T ss_pred eeccCCCceeEecCCEEEEeCCCCCCceeEEEEEEcCCCceE------EEEechhhhH
Confidence 3444 46888884 899998833999999999999877 788 9999998765
No 18
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=97.51 E-value=0.0004 Score=48.96 Aligned_cols=45 Identities=16% Similarity=0.279 Sum_probs=36.2
Q ss_pred ccCCcEEEeCCEEEEEEeC-CccccceEEEEEEC--C--eEEEeeeeeEEEecCCC
Q psy8351 44 INFHEEKDVNGIKFSAYNA-GHVLGAAMFLIEIA--G--VKIARYLFLWYQVNVNQ 94 (103)
Q Consensus 44 v~y~~~~~i~~~~v~~~~A-GHIlGsa~~~i~~~--~--~~i~~~~~~~ysgD~~~ 94 (103)
+.-++.+.+++.+++++.. ||.+|++++.++.. + .++ +|+||+..
T Consensus 128 ~~~g~~~~~g~~~i~~i~~pGHt~g~~~~~~~~~~~~~~~~~------lf~GD~~~ 177 (263)
T 1k07_A 128 LHDGERVELGGTVLTAHLTPGHTRGCTTWTMKLKDHGKQYQA------VIIGSIGV 177 (263)
T ss_dssp ECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEEE------EEECCCCC
T ss_pred eCCCCEEEECCeEEEEEECCCCCCCcEEEEEecccCCceeEE------EEECCccc
Confidence 4456777888988988764 89999999999874 4 367 99999976
No 19
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=97.49 E-value=0.00014 Score=51.40 Aligned_cols=67 Identities=9% Similarity=0.225 Sum_probs=55.7
Q ss_pred CCCCCCHHHHHHHHhhcccccCCc-EEEeCCEEEEEEeCCcccc----------ceEEEEEECCeEEEeeeeeEEEecCC
Q psy8351 25 EQMLYTESDLEKSMDKIETINFHE-EKDVNGIKFSAYNAGHVLG----------AAMFLIEIAGVKIARYLFLWYQVNVN 93 (103)
Q Consensus 25 ~~p~y~~~dv~~~~~~~~~v~y~~-~~~i~~~~v~~~~AGHIlG----------sa~~~i~~~~~~i~~~~~~~ysgD~~ 93 (103)
..+.|..++..+.+++...++.++ ++++++++|++.++-|-++ ++.+.|+.++.++ +|+||..
T Consensus 91 ~~~v~~~~~~~~~l~~~~~l~~g~~~~~~g~~~i~~~p~~H~~~~~~~~~~~~~~~g~~i~~~g~~i------~~~GDt~ 164 (235)
T 3kl7_A 91 DTEIIANENSQKKLGKGKVLKNGDTDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDGLRV------YIAGDTE 164 (235)
T ss_dssp TCEEEECHHHHHHHTCSEECCTTCEECCSTTCEEEEEECCCCSTTGGGTSCTTTSEEEEEEETTEEE------EECCSCC
T ss_pred CCEEEEcHHHHHHhcCcEEecCCCEEEEECCEEEEEEEeecCCCccccccCCCCceEEEEEeCCeEE------EEECCCC
Confidence 456777777777777788888899 9999999999999988653 4788999999999 9999998
Q ss_pred CCCc
Q psy8351 94 QNNQ 97 (103)
Q Consensus 94 ~~~~ 97 (103)
..++
T Consensus 165 ~~~~ 168 (235)
T 3kl7_A 165 DIPE 168 (235)
T ss_dssp SCGG
T ss_pred chhh
Confidence 7653
No 20
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=97.34 E-value=0.00042 Score=50.91 Aligned_cols=49 Identities=8% Similarity=0.126 Sum_probs=40.3
Q ss_pred ccccCCcEEEeCCEEEEEEeC-CccccceEEEEEECC---e-EEEeeeeeEEEecCCCCC
Q psy8351 42 ETINFHEEKDVNGIKFSAYNA-GHVLGAAMFLIEIAG---V-KIARYLFLWYQVNVNQNN 96 (103)
Q Consensus 42 ~~v~y~~~~~i~~~~v~~~~A-GHIlGsa~~~i~~~~---~-~i~~~~~~~ysgD~~~~~ 96 (103)
..+.-++.+++++.+++++.+ ||.+|++++.++.++ . ++ +||||.-+.+
T Consensus 132 ~~l~~g~~l~lg~~~l~vi~tPGHT~g~i~~~~~~~~~~~~~~~------lftGD~l~~~ 185 (311)
T 2p18_A 132 KPVREGDRVQVGDLSVEVIDAPCHTRGHVLYKVQHPQHPNDGVA------LFTGDTMFIA 185 (311)
T ss_dssp EEECTTCEEEETTEEEEEEECCSSSTTCEEEEEECTTCGGGCEE------EEEETTEETT
T ss_pred eEeCCCCEEEECCeEEEEEECCCCCcccEEEEEecCCcCCcCCE------EEEcCccccC
Confidence 345557788899999999988 999999999998766 6 88 9999986543
No 21
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=97.30 E-value=0.00094 Score=50.18 Aligned_cols=66 Identities=11% Similarity=0.076 Sum_probs=50.3
Q ss_pred CCCCCHHHHHHHHh-------hcccccCCcEEEeCCEEEEEEeCCcc-------------c---------cceEEEEEEC
Q psy8351 26 QMLYTESDLEKSMD-------KIETINFHEEKDVNGIKFSAYNAGHV-------------L---------GAAMFLIEIA 76 (103)
Q Consensus 26 ~p~y~~~dv~~~~~-------~~~~v~y~~~~~i~~~~v~~~~AGHI-------------l---------Gsa~~~i~~~ 76 (103)
.+.|..+...+.+. ++..++.++.+++++++|+++++-|- + +++.+.|+.+
T Consensus 163 ~~v~~~~~~~~~l~~~g~~~~~~~~l~~g~~~~~g~~~v~~~~~~H~~~~~~~p~~h~~~~G~~~~~~~~~~~g~~i~~~ 242 (379)
T 3bv6_A 163 VKFIGPQACVDLWLGWGVPQERCIVAKVGDVLEIGDVKIRVLDSFDRTALVTLPKGVSSYDKAILDGMDERAVNYLIETS 242 (379)
T ss_dssp CEEEECHHHHHHHHHHTCCGGGEEECCTTCEEEETTEEEEEEECCCHHHHTCCCTTSCSSCGGGGGCHHHHBEEEEEEET
T ss_pred cEEEecHHHHHHHHHcCCChhhEEEeCCCCEEEECCEEEEEEecccccccccccccccccccccccccCCceEEEEEEeC
Confidence 45565555555543 35667788999999999999999773 2 3788999999
Q ss_pred CeEEEeeeeeEEEecCCCCCc
Q psy8351 77 GVKIARYLFLWYQVNVNQNNQ 97 (103)
Q Consensus 77 ~~~i~~~~~~~ysgD~~~~~~ 97 (103)
++++ +||||......
T Consensus 243 g~~i------~~sGDt~~~~~ 257 (379)
T 3bv6_A 243 GGSV------YHSGDSHYSNY 257 (379)
T ss_dssp TEEE------EECTTCCCCTT
T ss_pred CeEE------EEeCCCCccHH
Confidence 9999 99999987643
No 22
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=97.17 E-value=0.00047 Score=46.85 Aligned_cols=46 Identities=17% Similarity=0.265 Sum_probs=36.3
Q ss_pred cccCCcEEEeCCEEEEEEeC-CccccceEEEEEECCeEEEeeeeeEEEecCCCCC
Q psy8351 43 TINFHEEKDVNGIKFSAYNA-GHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQNN 96 (103)
Q Consensus 43 ~v~y~~~~~i~~~~v~~~~A-GHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~~ 96 (103)
.+.-++.+++++.+++++.+ ||.+|++++.++ +.++ +||||.....
T Consensus 110 ~~~~g~~~~~g~~~i~~~~~pgHt~g~~~~~~~--~~~~------lf~GD~~~~~ 156 (210)
T 2xf4_A 110 WLNDGDRVSVGNVTLQVLHCPGHTPGHVVFFDE--QSQL------LISGDVIFKG 156 (210)
T ss_dssp CCCTTCEEEETTEEEEEEECCSSSTTCEEEEET--TTTE------EEEETSEETT
T ss_pred EECCCCEEEECCeEEEEEECCCCCCCcEEEEeC--CCCE------EEECCEeccC
Confidence 34556788889999998864 899999988764 5667 9999986654
No 23
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=97.16 E-value=0.00088 Score=48.42 Aligned_cols=48 Identities=8% Similarity=0.111 Sum_probs=38.9
Q ss_pred cccCCcEEEeCCEEEEEEeC-CccccceEEEEEECCeE------EEeeeeeEEEecCCCCC
Q psy8351 43 TINFHEEKDVNGIKFSAYNA-GHVLGAAMFLIEIAGVK------IARYLFLWYQVNVNQNN 96 (103)
Q Consensus 43 ~v~y~~~~~i~~~~v~~~~A-GHIlGsa~~~i~~~~~~------i~~~~~~~ysgD~~~~~ 96 (103)
.+.-++.+.+++++++++.. ||.+|++.+.+...+++ + +||||.-+.+
T Consensus 125 ~~~~g~~l~~g~~~i~vi~tPGHT~g~~~~~~~~~~~~~~~~~~~------lftGD~l~~~ 179 (298)
T 4efz_A 125 LLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEAHAAHDARDAA------AFVGDTLFMP 179 (298)
T ss_dssp EECTTCEEEETTEEEEEEECCSSSTTCEEEEEEETTCCGGGCBCE------EECCSSBCCT
T ss_pred EeCCCCEEEECCEEEEEEECCCCCcccEEEEECCCcccccCCceE------EEEcCccccC
Confidence 34456778889999988875 89999999999977655 7 9999986653
No 24
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=97.07 E-value=0.00076 Score=48.05 Aligned_cols=43 Identities=23% Similarity=0.314 Sum_probs=33.8
Q ss_pred cEEEe-CCEEEEEEeCCccccceEEEEEECCeEEEeeeeeEEEecCCCCCc
Q psy8351 48 EEKDV-NGIKFSAYNAGHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQNNQ 97 (103)
Q Consensus 48 ~~~~i-~~~~v~~~~AGHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~~~ 97 (103)
...++ +++++ ..-.||.+|++.+.++.++.++ +||||.-....
T Consensus 169 ~~~~l~~gi~~-~~~pGHt~g~~~~~i~~~~~~v------lftGD~~~~~~ 212 (280)
T 3esh_A 169 KHFEPVPGIKM-QHSGGHSFGHTIITIESQGDKA------VHMGDIFPTTA 212 (280)
T ss_dssp SEECSSTTEEE-EECCSSSTTCEEEEEEETTEEE------EECGGGSCSGG
T ss_pred CCCeEcCCEEE-EEcCCCCcccEEEEEEECCcEE------EEEEccCCchh
Confidence 33444 36777 5568999999999999999999 99999876554
No 25
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=97.07 E-value=0.00064 Score=46.98 Aligned_cols=47 Identities=13% Similarity=0.065 Sum_probs=35.6
Q ss_pred ccccCCcEEEeCCEEEEEEeCCccccceEEEEEECC-eEEEeeeeeEEEecCCCC
Q psy8351 42 ETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAG-VKIARYLFLWYQVNVNQN 95 (103)
Q Consensus 42 ~~v~y~~~~~i~~~~v~~~~AGHIlGsa~~~i~~~~-~~i~~~~~~~ysgD~~~~ 95 (103)
..++-++.+..+++++...+ ||.+|++++.++.++ .++ +||||....
T Consensus 131 ~~~~~g~~l~~~~~~v~~~p-GHt~g~~~~~~~~~~~~~v------lftGD~~~~ 178 (221)
T 1ztc_A 131 VLLKGEESLFDEKVKVFHTP-WHAREHLSFLLDTENAGRV------LITGDITPN 178 (221)
T ss_dssp EEECSCCEETTTTEEEEECC-SSSTTCEEEEEEETTTEEE------EECGGGSCS
T ss_pred EEeCCCCEEECCeEEEEEcC-CCCcccEEEEEEcCCCCeE------EEEeCcccc
Confidence 34444555432378888777 999999999999876 788 999998753
No 26
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=97.03 E-value=0.0012 Score=47.23 Aligned_cols=48 Identities=10% Similarity=0.112 Sum_probs=38.5
Q ss_pred cccccCCcEEEeCCEEEEEEeC-CccccceEEEEEECCeEEEeeeeeEEEecCCCCC
Q psy8351 41 IETINFHEEKDVNGIKFSAYNA-GHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQNN 96 (103)
Q Consensus 41 ~~~v~y~~~~~i~~~~v~~~~A-GHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~~ 96 (103)
+..+.-++.++++|.+++++.+ ||.+|++++.++ +.++ +||||.-+..
T Consensus 122 ~~~~~~g~~~~~gg~~~~~~~~pGHt~~~~~~~~~--~~~~------lftGD~~~~~ 170 (289)
T 4ad9_A 122 YVYLKDGDVIKTEGATLRVLYTPGHTDDHMALLLE--EENA------IFSGDCILGE 170 (289)
T ss_dssp EEECCTTCEEEETTEEEEEEECCSSSTTCEEEEET--TTTE------EEEETSSCSS
T ss_pred eEEcCCCCEEEeCCeEEEEEECCCCCCCCEEEEEc--CCCE------EEEecccCCC
Confidence 4566678889999999999988 999999999874 4457 9999965443
No 27
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=96.97 E-value=0.0015 Score=44.47 Aligned_cols=61 Identities=13% Similarity=0.162 Sum_probs=43.5
Q ss_pred CCCCHHHHHHHHhh------cccccCCcEEEeCCEEEEEEe--CCccccceEEEEEECCeEEEeeeeeEEEecCCCC
Q psy8351 27 MLYTESDLEKSMDK------IETINFHEEKDVNGIKFSAYN--AGHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQN 95 (103)
Q Consensus 27 p~y~~~dv~~~~~~------~~~v~y~~~~~i~~~~v~~~~--AGHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~ 95 (103)
+.|..+...+.+.. ...++-++++.+++.+++++. .||.+|++++.+. +.++ +||||.-..
T Consensus 94 ~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~g~~~~~~~--~~~~------lf~GD~~~~ 162 (219)
T 3l6n_A 94 KTYATAKTNEFLKKDGKATSTEIIKTGKPYRIGGEEFVVDFLGEGHTADNVVVWFP--KYNV------LDGGCLVKS 162 (219)
T ss_dssp EEEECHHHHHHHHHTTCCCCSEECCTTSEEEETTEEEEEECCCCSSSSSCCEEEET--TTTE------EEEETTSCC
T ss_pred EEEEcHHHHHHHHhcCCCCCcEecCCCCEEEECCEEEEEEeCCCCCCCCCEEEEEC--CCCE------EEECCeeec
Confidence 44544444444432 334566788999999999986 6999999998874 4456 999997653
No 28
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=96.95 E-value=0.0012 Score=47.70 Aligned_cols=33 Identities=12% Similarity=-0.036 Sum_probs=27.3
Q ss_pred cccCCcEEEeCCEEEEEEeCCccccceEEEEEE
Q psy8351 43 TINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEI 75 (103)
Q Consensus 43 ~v~y~~~~~i~~~~v~~~~AGHIlGsa~~~i~~ 75 (103)
.++-++.+++++++|++++++|-.++..+.++.
T Consensus 119 ~~~~g~~~~~~~~~v~~~p~~H~~~~~gy~i~~ 151 (320)
T 1y44_A 119 EIEEGIVFEDDQFIVTAVSVIHGVEAFGYRVQE 151 (320)
T ss_dssp ECCSEEEEECSSEEEEEEECBSSSSBEEEEEEE
T ss_pred EcCCCceEecCCEEEEEEEccCCCCcceEEEec
Confidence 444456777889999999999999998888874
No 29
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=96.94 E-value=0.00087 Score=49.78 Aligned_cols=47 Identities=11% Similarity=0.131 Sum_probs=37.1
Q ss_pred cccccCCcEEEeCCEEEEEEeC--CccccceEEEEEECCeEEEeeeeeEEEecCCCC
Q psy8351 41 IETINFHEEKDVNGIKFSAYNA--GHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQN 95 (103)
Q Consensus 41 ~~~v~y~~~~~i~~~~v~~~~A--GHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~ 95 (103)
+..++-++.+++++.+++++++ ||.+|++.+.+ ++.++ +||||....
T Consensus 121 ~~~~~~g~~~~~g~~~~~~~~~p~gH~~~~~~~~~--~~~~~------l~~GD~~~~ 169 (402)
T 1e5d_A 121 VQVVKHGETLSLGKRTVTFYETRMLHWPDSMVSWF--ADEKV------LISNDIFGQ 169 (402)
T ss_dssp EEEECTTCEEECSSCEEEEEECTTSSSTTCEEEEE--TTTTE------EEEETTTCC
T ss_pred eEEcCCCCEEEECCCEEEEEeCCCCCCCCcEEEEE--CCCCE------EEecccccC
Confidence 4456667888899999999987 79999998765 45667 999999543
No 30
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=96.93 E-value=0.0015 Score=46.18 Aligned_cols=48 Identities=8% Similarity=0.173 Sum_probs=38.0
Q ss_pred cccCCcEEEeCCEEEEEEeC-CccccceEEEEEECC----eEEEeeeeeEEEecCCCCC
Q psy8351 43 TINFHEEKDVNGIKFSAYNA-GHVLGAAMFLIEIAG----VKIARYLFLWYQVNVNQNN 96 (103)
Q Consensus 43 ~v~y~~~~~i~~~~v~~~~A-GHIlGsa~~~i~~~~----~~i~~~~~~~ysgD~~~~~ 96 (103)
.+.-++.+++++.+++++.. ||.+|++.+.++..+ .++ +||||.-+..
T Consensus 95 ~~~~g~~~~~g~~~i~v~~tpGHt~g~~~~~~~~~~~~~~~~~------lftGD~~~~~ 147 (245)
T 2gcu_A 95 FLEPGDKVSIGDIYLEVRATPGHTAGCVTYVTGEGADQPQPRM------AFTGDAVLIR 147 (245)
T ss_dssp EECTTCEEEETTEEEEEEECCSSSTTCEEEEECCSTTSCSSCE------EEEETTSBTT
T ss_pred EcCCCCEEEECCEEEEEEECCCCCCCCEEEEECCccccccccE------EEECCccccC
Confidence 45556788889999998876 999999999887542 367 9999987643
No 31
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=96.92 E-value=0.0017 Score=49.84 Aligned_cols=49 Identities=8% Similarity=0.116 Sum_probs=39.8
Q ss_pred ccccCCcEEEeCCEEEEEEeC-CccccceEEEEEECCe-----EEEeeeeeEEEecCCCCC
Q psy8351 42 ETINFHEEKDVNGIKFSAYNA-GHVLGAAMFLIEIAGV-----KIARYLFLWYQVNVNQNN 96 (103)
Q Consensus 42 ~~v~y~~~~~i~~~~v~~~~A-GHIlGsa~~~i~~~~~-----~i~~~~~~~ysgD~~~~~ 96 (103)
..+.-++.+++++++++++.. ||.+|++++.+...+. ++ +||||.-+.+
T Consensus 100 ~~~~~g~~~~~g~~~i~~i~tPGHt~g~~~~~~~~~~~~~~~~~~------lftGD~lf~~ 154 (474)
T 3tp9_A 100 RLLKDGDELHFGNVRIVVMHTPGHTPEHVSYLLYDGKTSPDVPMA------LFSGDFVFVG 154 (474)
T ss_dssp EEECTTCEEEETTEEEEEEECCSSSSSCEEEEEEETTTEEEEEEE------EEEETSEETT
T ss_pred eECCCCCEEEECCEEEEEEECCCCCCCCEEEEEecCCCCCCCceE------EEeCCccccC
Confidence 345567888899999988776 9999999999987654 67 9999987544
No 32
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=96.87 E-value=0.0028 Score=44.13 Aligned_cols=41 Identities=17% Similarity=0.315 Sum_probs=32.8
Q ss_pred EEeCCEEEEEEeCCccccceEEEEEEC-CeEEEeeeeeEEEecCCCCCc
Q psy8351 50 KDVNGIKFSAYNAGHVLGAAMFLIEIA-GVKIARYLFLWYQVNVNQNNQ 97 (103)
Q Consensus 50 ~~i~~~~v~~~~AGHIlGsa~~~i~~~-~~~i~~~~~~~ysgD~~~~~~ 97 (103)
..++++++...+ ||.+|++.+.++.. ++++ +||||......
T Consensus 160 ~~~~~i~~~~~p-GHt~g~~~~~~~~~~~~~v------l~~GD~~~~~~ 201 (254)
T 3dha_A 160 EVVPGVQLLYTP-GHSPGHQSLFIETEQSGSV------LLTIDASYTKE 201 (254)
T ss_dssp EEETTEEEEECC-SSSTTCEEEEEEETTTEEE------EEEETTCSSHH
T ss_pred cccCCEEEEECC-CCCCCCEEEEEEeCCCCEE------EEEecccchhh
Confidence 344678877655 99999999999986 6788 99999987653
No 33
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=96.81 E-value=0.0018 Score=46.26 Aligned_cols=47 Identities=9% Similarity=0.114 Sum_probs=36.6
Q ss_pred cccCCcEEEeCCEEEEEEeC-CccccceEEEE-EE--CCeEEEeeeeeEEEecCCCC
Q psy8351 43 TINFHEEKDVNGIKFSAYNA-GHVLGAAMFLI-EI--AGVKIARYLFLWYQVNVNQN 95 (103)
Q Consensus 43 ~v~y~~~~~i~~~~v~~~~A-GHIlGsa~~~i-~~--~~~~i~~~~~~~ysgD~~~~ 95 (103)
.+.-++.+++++.+++++.. ||.+|++++.+ +. ++.++ +||||.-+.
T Consensus 88 ~~~~g~~~~~g~~~~~vi~tPGHt~g~~~~~~~~~~~~~~~~------lftGD~l~~ 138 (260)
T 1qh5_A 88 KITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGGSEPPA------VFTGDTLFV 138 (260)
T ss_dssp ECCTTCEEEETTEEEEEEECCSSSTTCEEEEEECSSSSSCCE------EEEETTEET
T ss_pred EeCCCCEEEECCEEEEEEECCCCCCCCEEEEEeccCCCCCCE------EEEcCcccc
Confidence 45556788889988888775 99999999988 43 35677 999998554
No 34
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=96.81 E-value=0.0019 Score=44.72 Aligned_cols=44 Identities=5% Similarity=-0.032 Sum_probs=34.3
Q ss_pred ccCCcEEEeCCEEEEEEe--CCccccceEEEEEECCeEEEeeeeeEEEecCCCC
Q psy8351 44 INFHEEKDVNGIKFSAYN--AGHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQN 95 (103)
Q Consensus 44 v~y~~~~~i~~~~v~~~~--AGHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~ 95 (103)
+.-++.++++|.+++++. .||.+|++++.+ ++.++ +||||.-..
T Consensus 143 ~~~g~~l~~g~~~i~~~~~~pGHt~g~~~~~~--~~~~~------lf~GD~~~~ 188 (246)
T 2fhx_A 143 LKQGKVFSFSNELVEVSFPGPAHSPDNVVVYF--PKKKL------LFGGCMIKP 188 (246)
T ss_dssp TTTCEEEEETTEEEEEECCCCSSSTTCCEEEE--TTTTE------EEEETTCCS
T ss_pred cCCCCEEEECCEEEEEEeCCCCCCCCCEEEEE--cCCCE------EEECCEecc
Confidence 344667888999999984 799999998876 34567 999998764
No 35
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=96.77 E-value=0.0025 Score=45.79 Aligned_cols=46 Identities=17% Similarity=0.228 Sum_probs=37.1
Q ss_pred cccCCcEEEeCCEEEEEEeC-CccccceEEEEEECCeEEEeeeeeEEEecCCCCC
Q psy8351 43 TINFHEEKDVNGIKFSAYNA-GHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQNN 96 (103)
Q Consensus 43 ~v~y~~~~~i~~~~v~~~~A-GHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~~ 96 (103)
.+.-++.++++|.+++++.+ ||.+|++++.+ ++.++ +||||.-...
T Consensus 149 ~~~~g~~l~~gg~~~~~i~tpGHt~g~~~~~~--~~~~~------lf~GD~~~~~ 195 (317)
T 2zo4_A 149 PLRDGEALEVAGKRLRVLWTPGHADGHAAFYL--EEEGV------LLAGDALLEK 195 (317)
T ss_dssp EECTTCEEEETTEEEEEEECCSSSTTCEEEEE--TTTTE------EEEETSCCSS
T ss_pred EECCCCEEEeCCceEEEEECCCCCcccEEEEe--CCCCE------EEECCEecCC
Confidence 34556788889999999987 99999999865 56677 9999987654
No 36
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=96.77 E-value=0.0022 Score=44.00 Aligned_cols=46 Identities=15% Similarity=0.221 Sum_probs=36.3
Q ss_pred cccCCcEEEeCCEEEEEE--eCCccccceEEEEEECCeEEEeeeeeEEEecCCCCC
Q psy8351 43 TINFHEEKDVNGIKFSAY--NAGHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQNN 96 (103)
Q Consensus 43 ~v~y~~~~~i~~~~v~~~--~AGHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~~ 96 (103)
.+.-++.+++++.+++++ ..||.+|++++.++ +.++ +||||+-...
T Consensus 112 ~~~~g~~~~~g~~~i~~~~~~pgHt~~~~~~~~~--~~~~------lf~GD~~~~~ 159 (223)
T 1m2x_A 112 TFDNNKSFKVGKSEFQVYYPGKGHTADNVVVWFP--KEKV------LVGGCIIKSA 159 (223)
T ss_dssp EESSCEEEEETTEEEEEECCCSSSSSSCCEEEET--TTTE------EEEETTSCCT
T ss_pred ecCCCceEEECCEEEEEEecCCCCCCCCEEEEEC--CCCE------EEEecccccC
Confidence 345567788899999998 48999999998764 4567 9999976654
No 37
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=96.56 E-value=0.0032 Score=44.81 Aligned_cols=46 Identities=11% Similarity=0.169 Sum_probs=36.0
Q ss_pred cccCCcEEEeCCEEEEEEeC-CccccceEEEEEECCeEEEeeeeeEEEecCCCCC
Q psy8351 43 TINFHEEKDVNGIKFSAYNA-GHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQNN 96 (103)
Q Consensus 43 ~v~y~~~~~i~~~~v~~~~A-GHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~~ 96 (103)
.+.-++.+++++.+++++.. ||.+|++++.++ +.++ +||||.-+..
T Consensus 90 ~~~~g~~~~lg~~~~~vi~tPGHt~g~~~~~~~--~~~~------lftGD~l~~~ 136 (254)
T 1xm8_A 90 ALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFP--GSRA------IFTGDTMFSL 136 (254)
T ss_dssp EECTTCEEEETTEEEEEEECCSSSSSCEEEEEG--GGTE------EEEETTEETT
T ss_pred eeCCCCEEEECCEEEEEEECCCCCCCcEEEEEC--CCCE------EEEcCccccC
Confidence 45556788889999988874 999999998874 3456 9999986653
No 38
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=96.53 E-value=0.0025 Score=44.06 Aligned_cols=44 Identities=11% Similarity=0.236 Sum_probs=34.8
Q ss_pred ccCCcEEEeCCEEEEEEe--CCccccceEEEEEECCeEEEeeeeeEEEecCCCC
Q psy8351 44 INFHEEKDVNGIKFSAYN--AGHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQN 95 (103)
Q Consensus 44 v~y~~~~~i~~~~v~~~~--AGHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~ 95 (103)
+.-++.+.+++.+++++. .||.+|++++.+. +.++ +||||.-..
T Consensus 123 ~~~g~~~~~g~~~i~~~~~~pgHt~g~~~~~~~--~~~~------lf~GD~~~~ 168 (232)
T 1a7t_A 123 FTDSLTVSLDGMPLQCYYLGGGHATDNIVVWLP--TENI------LFGGCMLKD 168 (232)
T ss_dssp ESSEEEEEETTEEEEEECCCCSSSTTCCEEEET--TTTE------EEEETTSCC
T ss_pred cCCCCEEEECCeEEEEEeCCCCCCCCCEEEEEC--CCCE------EEEcCcccc
Confidence 444567788999999985 8999999998764 4456 999998774
No 39
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=96.52 E-value=0.0043 Score=45.55 Aligned_cols=36 Identities=28% Similarity=0.339 Sum_probs=30.2
Q ss_pred CEEEEEEeCCccccceEEEEEECCeEEEeeeeeEEEecCCCCC
Q psy8351 54 GIKFSAYNAGHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQNN 96 (103)
Q Consensus 54 ~~~v~~~~AGHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~~ 96 (103)
|+++... .||.+|++.+.++.++.++ +|+||.....
T Consensus 225 gi~vi~t-pGHtpG~~~~~i~~~~~~v------lf~GD~~~~~ 260 (331)
T 1p9e_A 225 GIKALAS-HGHTPGHTTYVVESQGQKL------ALLGDLILVA 260 (331)
T ss_dssp TEEEEEC-TTSSTTCEEEEEEETTEEE------EECTTSCCCH
T ss_pred cEEEEEc-CCCChhCEEEEEEECCcEE------EEEECccCcc
Confidence 6666654 4999999999999888899 9999987754
No 40
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=96.48 E-value=0.0018 Score=45.64 Aligned_cols=41 Identities=20% Similarity=0.406 Sum_probs=31.5
Q ss_pred cEEEeCC-EEEEEEeCCccccceEEEEEEC-CeEEEeeeeeEEEecCCCC
Q psy8351 48 EEKDVNG-IKFSAYNAGHVLGAAMFLIEIA-GVKIARYLFLWYQVNVNQN 95 (103)
Q Consensus 48 ~~~~i~~-~~v~~~~AGHIlGsa~~~i~~~-~~~i~~~~~~~ysgD~~~~ 95 (103)
+.++++| +++...+ ||.+|++++.++.+ +.++ +||||....
T Consensus 169 ~~~~l~g~~~v~~~p-GHt~g~~~~~~~~~~~~~~------lf~GD~~~~ 211 (274)
T 3aj3_A 169 GDVDLARGVKLISTP-GHSIGHYSLLVEFPRRKPI------LFTIDAAYT 211 (274)
T ss_dssp SSEEEETTEEEEECT-TSSTTCEEEEECCSSSCCE------EEEETTCSS
T ss_pred CccccCCEEEEEECC-CCCceeeEEEEECCCCCEE------EEEechhhh
Confidence 4456667 7776654 89999999999876 5678 999997654
No 41
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=96.47 E-value=0.0021 Score=47.71 Aligned_cols=44 Identities=14% Similarity=0.158 Sum_probs=35.4
Q ss_pred ccccCCcEEEeCCEEEEEEeC--CccccceEEEEEECCeEEEeeeeeEEEecCC
Q psy8351 42 ETINFHEEKDVNGIKFSAYNA--GHVLGAAMFLIEIAGVKIARYLFLWYQVNVN 93 (103)
Q Consensus 42 ~~v~y~~~~~i~~~~v~~~~A--GHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~ 93 (103)
..+.-++.+++++.+++++++ ||.+|+..+.+. +.++ +||||.-
T Consensus 127 ~~~~~g~~~~~g~~~i~~~~~p~gH~~~~~~~~~~--~~~~------lf~GD~~ 172 (404)
T 2ohh_A 127 MTVKTGDVLDLGGKTLTFLETPLLHWPDSMFTLLD--EDGI------LFSNDAF 172 (404)
T ss_dssp EECCTTCEEECSSCEEEEEECTTSSSTTCEEEEEE--TTTE------EECTTTT
T ss_pred eEcCCCCEEEECCEEEEEEeCCCCCCCCceEEEEC--CCcE------EEecCcc
Confidence 445667888889999999988 799999988764 3456 9999975
No 42
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=96.46 E-value=0.0033 Score=44.84 Aligned_cols=44 Identities=18% Similarity=0.298 Sum_probs=34.6
Q ss_pred ccccCCcEEEeCCEEEEEEeC-CccccceEEEEEECCeEEEeeeeeEEEecCCCC
Q psy8351 42 ETINFHEEKDVNGIKFSAYNA-GHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQN 95 (103)
Q Consensus 42 ~~v~y~~~~~i~~~~v~~~~A-GHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~ 95 (103)
..+.-++.+++++.+++++.. ||.+|++++. +.++ +||||.-+.
T Consensus 94 ~~~~~g~~~~~g~~~~~vi~tPGHt~g~~~~~----~~~~------lftGD~l~~ 138 (258)
T 2qed_A 94 HLVGDGDTIRVLGEKFTLFATPGHTLGHVCYF----SRPY------LFCGDTLFS 138 (258)
T ss_dssp EECCTTCEEEETTEEEEEEECCSSSTTCEEEE----ETTE------EEEETTEET
T ss_pred EEeCCCCEEEECCcEEEEEECCCCCCCCeEEE----cCCE------EEECCCCCC
Confidence 345557788899999998876 9999999887 3345 999998654
No 43
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=96.45 E-value=0.0041 Score=43.31 Aligned_cols=44 Identities=16% Similarity=0.214 Sum_probs=34.0
Q ss_pred ccccCCcEEEeCCEEEEEEeC-CccccceEEEEEECCeEEEeeeeeEEEecCCCC
Q psy8351 42 ETINFHEEKDVNGIKFSAYNA-GHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQN 95 (103)
Q Consensus 42 ~~v~y~~~~~i~~~~v~~~~A-GHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~ 95 (103)
..++-++.++++|++++++++ ||.+|+..+.+ .++ +||||....
T Consensus 125 ~~~~~g~~~~~g~~~i~~~~~pGHt~~~~~~~~----~~~------lf~GD~~~~ 169 (261)
T 3adr_A 125 IEVEGNEEFDLGGYRMRLIYTPGHARHHMSVLV----DDF------LFTGDSAGA 169 (261)
T ss_dssp EEECSCCEEECSSSEEEEEECTTSCTTCEEEEE----TTE------EEEETSSCE
T ss_pred EecCCCCEEEECCEEEEEEECCCCCCccEEEEE----CCE------EEEcCcccc
Confidence 345567788889999999874 79999988853 245 999998754
No 44
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=96.44 E-value=0.0054 Score=42.10 Aligned_cols=44 Identities=9% Similarity=0.160 Sum_probs=34.0
Q ss_pred ccCCcEEEeCCEEEEEE--eCCccccceEEEEEECCeEEEeeeeeEEEecCCCC
Q psy8351 44 INFHEEKDVNGIKFSAY--NAGHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQN 95 (103)
Q Consensus 44 v~y~~~~~i~~~~v~~~--~AGHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~ 95 (103)
+.-++.+++++++++++ ..||.+|++.+.+ ++.++ +||||.-..
T Consensus 127 ~~~~~~~~~g~~~i~~~~~~pgHt~g~~~~~~--~~~~~------lf~GD~~~~ 172 (227)
T 1mqo_A 127 LQTVTNLKFGNMKVETFYPGKGHTEDNIVVWL--PQYNI------LVGGCLVKS 172 (227)
T ss_dssp BCSEEEEEETTEEEEEECCCCSSSSSCCEEEE--TTTTE------EEEETTSCC
T ss_pred cCCCCeeeECCEEEEEEecCCCCCCCCEEEEE--CCCCE------EEEeeeeec
Confidence 33456778899999986 4799999999876 45566 999998654
No 45
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=96.43 E-value=0.0063 Score=46.88 Aligned_cols=49 Identities=14% Similarity=0.156 Sum_probs=39.2
Q ss_pred ccccCCcEEEeCCEEEEEEeC-CccccceEEEEEEC-----CeEEEeeeeeEEEecCCCCC
Q psy8351 42 ETINFHEEKDVNGIKFSAYNA-GHVLGAAMFLIEIA-----GVKIARYLFLWYQVNVNQNN 96 (103)
Q Consensus 42 ~~v~y~~~~~i~~~~v~~~~A-GHIlGsa~~~i~~~-----~~~i~~~~~~~ysgD~~~~~ 96 (103)
..+.-++.+++++++++++.. ||.+|++++.++.. +.++ +||||.-+.+
T Consensus 120 ~~~~~g~~l~~g~~~l~vi~tPGHT~g~~~~~~~~~~~~~~~~~~------lftGD~lf~~ 174 (466)
T 3r2u_A 120 HFVQHNDDIYVGNIKLKVLHTPGHTPESISFLLTDEGAGAQVPMG------LFSGDFIFVG 174 (466)
T ss_dssp EEECTTCEEEETTEEEEEEECCSSSTTCEEEEEECGGGTCCSCCE------EEEETTBCSS
T ss_pred EEeCCCCEEEECCEEEEEEECCCCCCCCEEEEEcCCCccCCCceE------EEECCcccCC
Confidence 456667888999999998875 89999999999863 2347 9999987654
No 46
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=96.35 E-value=0.004 Score=46.11 Aligned_cols=46 Identities=4% Similarity=-0.032 Sum_probs=35.5
Q ss_pred cccccCCcEEEeCCEEEEEEeC--CccccceEEEEEECCeEEEeeeeeEEEecCCC
Q psy8351 41 IETINFHEEKDVNGIKFSAYNA--GHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQ 94 (103)
Q Consensus 41 ~~~v~y~~~~~i~~~~v~~~~A--GHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~ 94 (103)
...++-++.+++++.+++++++ ||.+|++.+.+ ++.++ +||||...
T Consensus 122 ~~~~~~g~~~~~g~~~~~~~~~p~gH~~~~~~~~~--~~~~~------lf~GD~~~ 169 (398)
T 1ycg_A 122 YTIVKTGTSVSLGKRSLTFIEAPMLHWPDSMFTYV--PEEAL------LLPNDAFG 169 (398)
T ss_dssp EEECCTTCEEECSSCEEEEEECTTSSSTTCEEEEE--TTTTE------EEEETTTC
T ss_pred eEEeCCCCEEeeCCcEEEEEeCCCCCCCCcEEEEE--CCCcE------EEeccccc
Confidence 3455667888889988988865 79999988764 55667 99999853
No 47
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=96.33 E-value=0.012 Score=42.01 Aligned_cols=34 Identities=29% Similarity=0.149 Sum_probs=26.9
Q ss_pred ccccCCcEEEeCCEEEEEEeCCccccceEEEEEE
Q psy8351 42 ETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEI 75 (103)
Q Consensus 42 ~~v~y~~~~~i~~~~v~~~~AGHIlGsa~~~i~~ 75 (103)
..++-++.+++++++|+++++-|-.++..+.++.
T Consensus 120 ~~~~~g~~~~~~~~~v~~~~~~H~~~~~gy~i~~ 153 (306)
T 2cbn_A 120 VEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEE 153 (306)
T ss_dssp EECCSEEEEECSSEEEEEEECBSSSCCEEEEEEE
T ss_pred EEcCCCcEeecCCEEEEEEEccCCCCccEEEEEe
Confidence 3445556778889999999999988888888874
No 48
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=96.31 E-value=0.0048 Score=44.24 Aligned_cols=42 Identities=12% Similarity=0.066 Sum_probs=32.8
Q ss_pred ccCCcEEEeCC-EEEEEEeC-CccccceEEEEEECCeEEEeeeeeEEEecCC
Q psy8351 44 INFHEEKDVNG-IKFSAYNA-GHVLGAAMFLIEIAGVKIARYLFLWYQVNVN 93 (103)
Q Consensus 44 v~y~~~~~i~~-~~v~~~~A-GHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~ 93 (103)
+.-++.+++++ .+++++.. ||.+|++.+.+. +.++ +|+||.-
T Consensus 139 ~~~g~~~~lg~g~~l~~i~~pGHt~g~~~~~~~--~~~~------lf~GD~~ 182 (303)
T 2vw8_A 139 VADGEWLELGPRHRLQVIEAHGHSDDHVVFYDV--RRRR------LFCGDAL 182 (303)
T ss_dssp ECTTCEEEEETTEEEEEEECTTSSTTCEEEEET--TTTE------EEEETTT
T ss_pred cCCCCEEecCCCeEEEEEECCCCCcccEEEEEC--CCCE------EEEcCcc
Confidence 44566778876 88888776 999999998774 4567 9999985
No 49
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=96.25 E-value=0.008 Score=41.85 Aligned_cols=44 Identities=20% Similarity=0.251 Sum_probs=36.3
Q ss_pred cEEEeCCEEEEEEeCCcccc-------ceEEEEEECCeEEEeeeeeEEEecCCCCCc
Q psy8351 48 EEKDVNGIKFSAYNAGHVLG-------AAMFLIEIAGVKIARYLFLWYQVNVNQNNQ 97 (103)
Q Consensus 48 ~~~~i~~~~v~~~~AGHIlG-------sa~~~i~~~~~~i~~~~~~~ysgD~~~~~~ 97 (103)
..+++++++|+++++-|-.+ +..+.|+.+++++ +|+||.+....
T Consensus 79 g~~~~~~~~I~~~~~~H~~~~g~~~g~~~g~~i~~~g~~i------~~~GDt~~~~~ 129 (220)
T 1vjn_A 79 GAYTVNGVKIKGVETFHDPSHGRERGKNIVFVFEGEGIKV------CHLGDLGHVLT 129 (220)
T ss_dssp EEEEETTEEEEEEEEEEC-------CEEEEEEEEETTEEE------EECTTCCSCCC
T ss_pred CeEEECCEEEEEEeeecCCCCCccCCCcEEEEEEECCeEE------EEeCCCCCcch
Confidence 36788999999999999773 4788899999999 99999987653
No 50
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=96.22 E-value=0.0062 Score=43.14 Aligned_cols=67 Identities=12% Similarity=0.137 Sum_probs=48.9
Q ss_pred CCCCCCH-HHHHHHHhhc---ccccCCcEEEeCCEEEEEEeCCcccc--------------ceEEEEEEC-CeEEEeeee
Q psy8351 25 EQMLYTE-SDLEKSMDKI---ETINFHEEKDVNGIKFSAYNAGHVLG--------------AAMFLIEIA-GVKIARYLF 85 (103)
Q Consensus 25 ~~p~y~~-~dv~~~~~~~---~~v~y~~~~~i~~~~v~~~~AGHIlG--------------sa~~~i~~~-~~~i~~~~~ 85 (103)
..|.|.. ....+.++.. ....+++++++++++|++.+|-|-.+ ++.+.|+.+ ++++
T Consensus 89 ~~~v~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~i~~~pa~H~~~~~~~~p~~~~~~~~~~g~~i~~~~~~~i----- 163 (264)
T 3rpc_A 89 SLPIFVQNTADKELITSQGFIDVRIIFESLEFNGITLRKTGGSHGTVEMYANPVLAPLAGDAMGVIFEAADEPTV----- 163 (264)
T ss_dssp TSCEEESSHHHHHHHHHTTCSCEEECSSEEEETTEEEEEECCCSSCHHHHTSTTHHHHHCCCCEEEEECTTSCCE-----
T ss_pred CCeEEEeCHHHHHHHHhcCCCeeEEecccEEECCEEEEEeccccCCccccccccccccccccEEEEEEeCCccEE-----
Confidence 3466755 5555555432 12234789999999999999999876 478889987 7888
Q ss_pred eEEEecCCCCCc
Q psy8351 86 LWYQVNVNQNNQ 97 (103)
Q Consensus 86 ~~ysgD~~~~~~ 97 (103)
+|+||.+..+.
T Consensus 164 -~~~GDt~~~~~ 174 (264)
T 3rpc_A 164 -YLVGDTVWTSD 174 (264)
T ss_dssp -EECCSCCSCHH
T ss_pred -EEECCcCchHH
Confidence 99999887643
No 51
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=96.17 E-value=0.0011 Score=46.06 Aligned_cols=42 Identities=14% Similarity=0.121 Sum_probs=32.8
Q ss_pred CCcEEEeCCEEEEEEeCCccccceEEEEEECCeEEEeeeeeEEEecCCCC
Q psy8351 46 FHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQN 95 (103)
Q Consensus 46 y~~~~~i~~~~v~~~~AGHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~ 95 (103)
-++.++++++++.+...||.+|++++.++ +.++ +||||+-..
T Consensus 144 ~g~~~~~g~~~v~~~~pGHt~g~~~~~~~--~~~~------lf~GD~~~~ 185 (243)
T 4hl2_A 144 PATAPNFGPLKVFYPGPGHTSDNITVGID--GTDI------AFGGCLIKD 185 (243)
T ss_dssp GGGSTTCTTEEEECCCSSSSTTCCEEEET--TTTE------EECTTTCCC
T ss_pred CCCeEEECCEEEEeCCCCCCcCCEEEEEc--CCCE------EEEcceeee
Confidence 34555668899965789999999999875 4456 999998873
No 52
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=96.06 E-value=0.0036 Score=46.82 Aligned_cols=46 Identities=7% Similarity=-0.084 Sum_probs=34.3
Q ss_pred cccccCCcEEEeCCEEEEEEeC--CccccceEEEEEECCeEEEeeeeeEEEecCCC
Q psy8351 41 IETINFHEEKDVNGIKFSAYNA--GHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQ 94 (103)
Q Consensus 41 ~~~v~y~~~~~i~~~~v~~~~A--GHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~ 94 (103)
...++-++.+++++.+++++.+ ||.+|+..+.+ .+.++ +||||+..
T Consensus 127 ~~~~~~g~~~~lg~~~~~~~~~p~gHt~~~~~~~~--~~~~~------lf~GD~~~ 174 (414)
T 2q9u_A 127 WLIVDDKYTLKIGKRTLKFIPVPLLHWPDSTFTYC--PEDKI------LFSNDGFG 174 (414)
T ss_dssp EEECCTTCCEECSSCEEEEEECTTSSSTTCEEEEE--TTTTE------EEEETTTC
T ss_pred eEEeCCCCEEEECCeEEEEEeCCCCCCCCceEEEE--CCCeE------EEEccccc
Confidence 3455667788888888887766 69999987644 45567 99999754
No 53
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=95.95 E-value=0.0088 Score=42.36 Aligned_cols=42 Identities=7% Similarity=0.059 Sum_probs=33.2
Q ss_pred CcEEEeCCEEEEEEeCCccccceEEEEEECCeEEEeeeeeEEEecCCCCC
Q psy8351 47 HEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQNN 96 (103)
Q Consensus 47 ~~~~~i~~~~v~~~~AGHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~~ 96 (103)
++.+.++++++.+...||.+|++.+.++ +.++ +|+||.-...
T Consensus 161 ~~~~~~g~~~v~~~~pGHt~g~~~~~~~--~~~~------lf~GD~~~~~ 202 (265)
T 2y8b_A 161 GDVVRFGPVEVFYPGAAHSGDNLVVYVP--AVRV------LFGGCAVHEA 202 (265)
T ss_dssp TEEEEETTEEEEECCSSSSTTCCEEEET--TTTE------EEEETTSCCT
T ss_pred CcEEeecCEEEEecCCCCCCCCEEEEec--CCCE------EEEccccccC
Confidence 4566778888887788999999998764 4456 9999987754
No 54
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=95.83 E-value=0.0039 Score=44.86 Aligned_cols=44 Identities=20% Similarity=0.326 Sum_probs=35.6
Q ss_pred ccccCCcEEEeCC----EEEEEEeCCcc-ccceEEEEEECCeEEEeeeeeEEEecCCCC
Q psy8351 42 ETINFHEEKDVNG----IKFSAYNAGHV-LGAAMFLIEIAGVKIARYLFLWYQVNVNQN 95 (103)
Q Consensus 42 ~~v~y~~~~~i~~----~~v~~~~AGHI-lGsa~~~i~~~~~~i~~~~~~~ysgD~~~~ 95 (103)
+.++.++++++++ ++|+++++.|- .++..+.|+ ++ +|+||.+.-
T Consensus 165 ~~l~~g~~~~~g~~~~~~~v~~~~~~H~~~~~~g~~i~----~~------~y~gDt~~~ 213 (293)
T 3md7_A 165 HDIAPETPFSIEGAGGAIRFEPFSQVHGDIESLGFRIG----SV------VYCTDVSAF 213 (293)
T ss_dssp EECCTTCCEEECCTTCCEEEEEEEEEETTEEEEEEEET----TE------EEECSCSBC
T ss_pred EEcCCCCcEEECCCCCcEEEEEEEecCCCCCEEEEEEe----EE------EEECCCCCC
Confidence 3455577888888 99999999998 688888876 45 999999843
No 55
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=95.62 E-value=0.05 Score=38.09 Aligned_cols=46 Identities=22% Similarity=0.151 Sum_probs=32.9
Q ss_pred ccCCcEEEeCCEEEEEEeC-CccccceEEEEEEC--Ce-EEEeeeeeEEEecCCCC
Q psy8351 44 INFHEEKDVNGIKFSAYNA-GHVLGAAMFLIEIA--GV-KIARYLFLWYQVNVNQN 95 (103)
Q Consensus 44 v~y~~~~~i~~~~v~~~~A-GHIlGsa~~~i~~~--~~-~i~~~~~~~ysgD~~~~ 95 (103)
+.-++.+++++++++++.. ||.+|+.++.++.. +. +. +++||.-..
T Consensus 139 ~~~g~~~~~g~~~i~~~~~pGHt~g~~~~~~~~~~~~~~~~------l~~gD~l~~ 188 (269)
T 1sml_A 139 VMDGEVITVGGIVFTAHFMAGHTPGSTAWTWTDTRNGKPVR------IAYADSLSA 188 (269)
T ss_dssp CCTTCEEEETTEEEEEEECCSSSTTCEEEEEEEEETTEEEE------EEECCCCCC
T ss_pred eCCCCEEEECCEEEEEEECCCCCcccEEEEEecccCCceeE------EEEeccccC
Confidence 3445678889999988765 89999999988752 32 23 455898543
No 56
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=95.40 E-value=0.019 Score=40.43 Aligned_cols=44 Identities=14% Similarity=0.080 Sum_probs=33.5
Q ss_pred cccccCCcEEEeC-CEEEEEEeC-C-ccccceEEEEEECCeEEEeeeeeEEEecC
Q psy8351 41 IETINFHEEKDVN-GIKFSAYNA-G-HVLGAAMFLIEIAGVKIARYLFLWYQVNV 92 (103)
Q Consensus 41 ~~~v~y~~~~~i~-~~~v~~~~A-G-HIlGsa~~~i~~~~~~i~~~~~~~ysgD~ 92 (103)
.+.++-++.++++ +.+++++.+ | |.+|+.++.+ .+.++ +||||.
T Consensus 129 ~~~~~~g~~l~lg~~~~~~~i~tpg~Ht~g~~~~~~--~~~~~------lfsGD~ 175 (262)
T 3hnn_A 129 ILPMRGKETLDLGKGHVLKFLPIPSPRWPAGLCTYD--VQTQI------LYTDKI 175 (262)
T ss_dssp EEECCSSCEEECSTTCEEEEEECCCSSCTTCEEEEE--TTTTE------EEEETT
T ss_pred eEEeCCCCEEEcCCCcEEEEEECCCCCCCCeeEEEe--CCCCE------EEEeec
Confidence 3456677888997 888877765 4 9999987764 45567 999999
No 57
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=95.22 E-value=0.062 Score=37.85 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=28.8
Q ss_pred ccccCCcEEEeCCEEEEEEe-CCccccceEEEEEEC
Q psy8351 42 ETINFHEEKDVNGIKFSAYN-AGHVLGAAMFLIEIA 76 (103)
Q Consensus 42 ~~v~y~~~~~i~~~~v~~~~-AGHIlGsa~~~i~~~ 76 (103)
+.+.-++++++++.+++++. .||.+|++++.++..
T Consensus 159 ~~~~~g~~~~~g~~~v~~~~~pgHt~g~~~~~~~~~ 194 (303)
T 4ax1_B 159 VTLADDGVVSVGPLALTAVASPGHTPGGTSWTWRSC 194 (303)
T ss_dssp EEECTTCEEEETTEEEEEEECCSSSTTCEEEEEEEE
T ss_pred EEeCCCCEEEECCeEEEEEeCCCCCccceEEEEEec
Confidence 44566788889999998886 789999999998863
No 58
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=95.10 E-value=0.026 Score=41.58 Aligned_cols=49 Identities=18% Similarity=0.335 Sum_probs=39.2
Q ss_pred ccccCCcEEEe---CCEEEEEEeCC--------cc-----ccceEEEEE--ECCeEEEeeeeeEEEecCCCCC
Q psy8351 42 ETINFHEEKDV---NGIKFSAYNAG--------HV-----LGAAMFLIE--IAGVKIARYLFLWYQVNVNQNN 96 (103)
Q Consensus 42 ~~v~y~~~~~i---~~~~v~~~~AG--------HI-----lGsa~~~i~--~~~~~i~~~~~~~ysgD~~~~~ 96 (103)
..++.++++++ ++++|+++++- |- ..+..+.|+ .+++++ +|+||.+.-.
T Consensus 140 ~~i~~g~~~~i~~~~~~~V~~~~v~H~~~~~~~H~~~~~~~~~~Gy~i~~~~~g~~i------~y~~Dt~~~~ 206 (321)
T 3jxp_A 140 NRIELEGSFVIDACPNLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDTRTGGKL------FYAPGLGQVD 206 (321)
T ss_dssp EECCSSSCEECTTSTTEEEEEEEECCCCCTTCTTTTSCCTTSEEEEEEEETTTCCEE------EEESSCCCCC
T ss_pred EEcCCCCeEEeccCCCeEEEEEEecCCccccccccccccCCCcEEEEEEecCCCcEE------EEECCCCCCC
Confidence 34555788999 99999999996 64 367788898 788899 9999988543
No 59
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=94.93 E-value=0.017 Score=39.13 Aligned_cols=34 Identities=15% Similarity=0.236 Sum_probs=28.0
Q ss_pred CEEEEEEeCCccccceEEEEEECCeEEEeeeeeEEEecCCCCC
Q psy8351 54 GIKFSAYNAGHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQNN 96 (103)
Q Consensus 54 ~~~v~~~~AGHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~~ 96 (103)
++++...++||.+|++.+.++ + ++ +||||.-...
T Consensus 109 ~~~~~~~p~gHt~g~~~~~~~--~-~~------lf~GD~~~~~ 142 (201)
T 2p97_A 109 GLKVMELQGSKTPGELALLLE--E-TT------LITGDLVRAY 142 (201)
T ss_dssp TEEEEEECSSSSTTEEEEEET--T-TE------EEECSSEEBS
T ss_pred eEEEEECCCCCCCCcEEEEEc--C-CE------EEECcccccc
Confidence 688888888999999998775 3 66 9999986654
No 60
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=94.55 E-value=0.021 Score=38.64 Aligned_cols=34 Identities=15% Similarity=0.158 Sum_probs=25.2
Q ss_pred CEEEEEEeCCccccceEEEEEECCeEEEeeeeeEEEecCCCCC
Q psy8351 54 GIKFSAYNAGHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQNN 96 (103)
Q Consensus 54 ~~~v~~~~AGHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~~ 96 (103)
++++... .||.+|+.++.++ +.++ +||||.....
T Consensus 116 ~~~~~~~-pGHt~g~~~~~~~--~~~~------lf~GD~~~~~ 149 (207)
T 2zwr_A 116 GFQVLHL-PGHSPGHVAFYDP--EGAQ------VFSGDLLFRG 149 (207)
T ss_dssp TEEEEEC-CSSSTTCEEEEET--TTTE------EEEETSEETT
T ss_pred EEEEEeC-CCCCCCcEEEEEC--CCCE------EEEecccCCC
Confidence 4555443 5899999998874 5567 9999986654
No 61
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=94.25 E-value=0.057 Score=41.20 Aligned_cols=44 Identities=18% Similarity=0.292 Sum_probs=35.4
Q ss_pred cccccCCcEEEeCCEEEEEEeC-C-ccccceEEEEEECCeEEEeeeeeEEEecCCC
Q psy8351 41 IETINFHEEKDVNGIKFSAYNA-G-HVLGAAMFLIEIAGVKIARYLFLWYQVNVNQ 94 (103)
Q Consensus 41 ~~~v~y~~~~~i~~~~v~~~~A-G-HIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~ 94 (103)
+..+.-++.+++++.+++|+.+ | |-||+.+++. + ++ +||||+..
T Consensus 138 ~~~v~dGd~l~lG~~~L~~i~tPg~H~p~~~~~y~--~--~i------LFsgD~fg 183 (410)
T 4dik_A 138 VTVVKDGEEREIGGKKFKFVMTPWLHWPDTMVTYL--D--GI------LFSCDVGG 183 (410)
T ss_dssp EEECCTTCEEEETTEEEEEEECTTSSSTTCEEEEE--T--TE------EEEETTTC
T ss_pred eeEecCCCEEeecceEEEEecCCCCCCCCCeeEEe--C--Cc------eEcccccc
Confidence 3456778899999999999988 6 9999998874 2 46 99999753
No 62
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=94.04 E-value=0.015 Score=39.93 Aligned_cols=40 Identities=13% Similarity=0.101 Sum_probs=28.8
Q ss_pred cEEEeCCEEEEEE--eCCccccceEEEEEECCeEEEeeeeeEEEecCCCC
Q psy8351 48 EEKDVNGIKFSAY--NAGHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQN 95 (103)
Q Consensus 48 ~~~~i~~~~v~~~--~AGHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~ 95 (103)
+.+.+++.+++++ -.||.+|++++.++ +.++ +||||.-..
T Consensus 121 ~~~~l~~~~i~~~~~~pGHt~g~~~~~~~--~~~~------lf~GD~~~~ 162 (228)
T 1jjt_A 121 VNYWLVKNKIEVFYPGPGHTPDNVVVWLP--ERKI------LFGGCFIKP 162 (228)
T ss_dssp SCCEEETTTEEEECCCCSSSTTCCEEEET--TTTE------EEEETTCCT
T ss_pred cceEecCceEEEEecCCCCCCCcEEEEEC--CCcE------EEEeccccc
Confidence 3445656666664 57999999998764 4466 999998754
No 63
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=93.57 E-value=0.17 Score=39.28 Aligned_cols=45 Identities=11% Similarity=0.221 Sum_probs=37.2
Q ss_pred cCCcEEEeCCEEEEEEe---CCc-----------cccceEEEEEECCeEEEeeeeeEEEecCCCC
Q psy8351 45 NFHEEKDVNGIKFSAYN---AGH-----------VLGAAMFLIEIAGVKIARYLFLWYQVNVNQN 95 (103)
Q Consensus 45 ~y~~~~~i~~~~v~~~~---AGH-----------IlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~ 95 (103)
.-++.+++++++|++++ +.| -.+|+.+.|+.++.++ +||||+...
T Consensus 149 ~~g~~~~~g~~~i~~l~~~~~~h~~~~~~~~~~~n~~S~vl~i~~~~~~i------LftGD~~~~ 207 (547)
T 2bib_A 149 QGDAHFQFGDMDIQLYNYENETDSSGELKKIWDDNSNSLISVVKVNGKKI------YLGGDLDNV 207 (547)
T ss_dssp TTTTEEEETTEEEEEESCSCCBCTTSCBCCBSSGGGGCCEEEEEETTEEE------EECTTCCST
T ss_pred CCCceEecCCeeEEEecCccccCccccccccCCCCCCcEEEEEEECCEEE------EecCCccch
Confidence 44678899999999997 333 3678999999999999 999999875
No 64
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=91.41 E-value=0.056 Score=36.55 Aligned_cols=39 Identities=10% Similarity=0.126 Sum_probs=25.4
Q ss_pred CcEEEeCCEEEEEEe--CCccccceEEEEEECCeEEEeeeeeEEEecCCC
Q psy8351 47 HEEKDVNGIKFSAYN--AGHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQ 94 (103)
Q Consensus 47 ~~~~~i~~~~v~~~~--AGHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~ 94 (103)
+..+.+++.+++++. .||.+|++++.+. +.++ +| ||--+
T Consensus 128 ~~~~~l~~~~~~~~~~~pGHt~g~~~~~~~--~~~~------lf-gd~l~ 168 (227)
T 3iog_A 128 DGDFTLQEGKVRAFYAGPAHTPDGIFVYFP--DEQV------LY-GGCIL 168 (227)
T ss_dssp SSCEEETTTTEEEECCCCSSSSSCCEEEET--TTTE------EE-CGGGS
T ss_pred cCeEEEcCcEEEEEecCCCCCCCcEEEEec--CCCE------EE-ccccc
Confidence 344666654555555 6999999998775 4446 78 55433
No 65
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=91.37 E-value=0.21 Score=40.22 Aligned_cols=42 Identities=14% Similarity=0.151 Sum_probs=32.0
Q ss_pred cEEEeCCEEEEEEe-CCc-cccceEEEEEECCeEEEeeeeeEEEecCCCCCc
Q psy8351 48 EEKDVNGIKFSAYN-AGH-VLGAAMFLIEIAGVKIARYLFLWYQVNVNQNNQ 97 (103)
Q Consensus 48 ~~~~i~~~~v~~~~-AGH-IlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~~~ 97 (103)
+.+.++|.+++++. -|| .+|++++.+. +.++ +|+||.-....
T Consensus 262 ~~l~lgg~~l~vi~tPGHhTpg~i~~~~p--~~~v------LftGD~v~~~~ 305 (658)
T 2cfu_A 262 EDLVLDGVPFTFQNTPGTESPAEMNIWLP--RQKA------LLMAENVVGTL 305 (658)
T ss_dssp EEEEETTEEEEEEECTTSSSSSBEEEEET--TTTE------EECTTTSCSSC
T ss_pred eEEEECCEEEEEEeCCCCCCCCcEEEEEC--CCCE------EEEeccccccC
Confidence 45667898888865 578 9999988764 4567 99999876543
No 66
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=90.01 E-value=0.2 Score=33.82 Aligned_cols=35 Identities=11% Similarity=0.171 Sum_probs=25.2
Q ss_pred CCEEEEEEeCCccccceEEEEEECCeEEEeeeeeEEEecCCCCC
Q psy8351 53 NGIKFSAYNAGHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQNN 96 (103)
Q Consensus 53 ~~~~v~~~~AGHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~~ 96 (103)
+++++.+...||.+|++++.+. +.++ +| ||.-+..
T Consensus 139 ~~~~v~~~~pGHt~g~~~~~~~--~~~~------lf-gD~~~~~ 173 (233)
T 3q6v_A 139 GSIRAMYLGEAHTKDGIFVYFP--AERV------LY-GNCILKE 173 (233)
T ss_dssp TTEEEECCCCSSSSSCCEEEET--TTTE------EE-CTTTSCS
T ss_pred ceEEEEECCCCCCcCcEEEEec--cCCE------EE-Cceeccc
Confidence 3577766668999999988764 4456 88 8875543
No 67
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=88.52 E-value=0.74 Score=34.24 Aligned_cols=25 Identities=12% Similarity=0.021 Sum_probs=21.8
Q ss_pred eCCEEEEEEeCCccccceEEEEEEC
Q psy8351 52 VNGIKFSAYNAGHVLGAAMFLIEIA 76 (103)
Q Consensus 52 i~~~~v~~~~AGHIlGsa~~~i~~~ 76 (103)
.++++|+++++.|-..+..+.|+-+
T Consensus 168 ~~~~~V~a~~~~H~vp~~gy~i~e~ 192 (368)
T 3zwf_A 168 DEQFVVKAFRLFHRIPSFGFSVVEK 192 (368)
T ss_dssp CSSEEEEEEEEESSSCEEEEEEEEC
T ss_pred CCCEEEEEEeccCCCceEEEEEEec
Confidence 3799999999999888999999754
No 68
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=84.21 E-value=0.8 Score=32.21 Aligned_cols=37 Identities=16% Similarity=0.159 Sum_probs=27.1
Q ss_pred CCEEEEEEeCCccccceEEEEEECCeEEEeeeeeEEEecCCCCCc
Q psy8351 53 NGIKFSAYNAGHVLGAAMFLIEIAGVKIARYLFLWYQVNVNQNNQ 97 (103)
Q Consensus 53 ~~~~v~~~~AGHIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~~~ 97 (103)
+++.+.....||.+|+.++.+ .+.++ +||||+-+.+.
T Consensus 178 g~~~~~~~~pgHT~g~~~~~~--~~~~v------LfsGD~l~~~~ 214 (270)
T 4eyb_A 178 GPLKVFYPGPGHTSDNITVGI--DGTDI------AFGGCLIKDSK 214 (270)
T ss_dssp TTEEEECCCSSSSSSCCEEEE--TTSSE------EECTTTCCCTT
T ss_pred CceeEEecccccCCCCEEEEe--cCCcE------EEEeCeecCCC
Confidence 356666667899999987655 45567 99999866543
No 69
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=82.23 E-value=0.3 Score=39.59 Aligned_cols=42 Identities=10% Similarity=0.087 Sum_probs=30.9
Q ss_pred CcEEEeCCEEEEEEeCC--ccccceEEEEEECCeEEEeeeeeEEEecCCCCC
Q psy8351 47 HEEKDVNGIKFSAYNAG--HVLGAAMFLIEIAGVKIARYLFLWYQVNVNQNN 96 (103)
Q Consensus 47 ~~~~~i~~~~v~~~~AG--HIlGsa~~~i~~~~~~i~~~~~~~ysgD~~~~~ 96 (103)
++.+.++|.+++++..+ |.+|++++.+. +.++ +|+||.-...
T Consensus 272 g~~l~lgg~~l~vi~tPG~Htpg~i~~~~p--~~~v------LftGD~~~~~ 315 (668)
T 2yhe_A 272 YERHTVDGVELEFQLTLGSEAPSDMNIYLP--QFKV------LNTADNAPPA 315 (668)
Confidence 34566778888877654 99999988764 4567 9999986643
No 70
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=70.43 E-value=1.2 Score=26.19 Aligned_cols=14 Identities=7% Similarity=-0.024 Sum_probs=10.9
Q ss_pred EeCCccccceEEEE
Q psy8351 60 YNAGHVLGAAMFLI 73 (103)
Q Consensus 60 ~~AGHIlGsa~~~i 73 (103)
|..|||+||..+-+
T Consensus 28 ~~~ghi~gAi~ip~ 41 (94)
T 1wv9_A 28 RSTPLPFAAEWVPL 41 (94)
T ss_dssp CCSCCSSCCEECCH
T ss_pred HhcccCCCCEECCH
Confidence 66899999976643
No 71
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=69.37 E-value=0.96 Score=27.06 Aligned_cols=14 Identities=14% Similarity=0.209 Sum_probs=10.7
Q ss_pred EeCCccccceEEEE
Q psy8351 60 YNAGHVLGAAMFLI 73 (103)
Q Consensus 60 ~~AGHIlGsa~~~i 73 (103)
|..|||+||..+-+
T Consensus 30 ~~~ghIpgA~~ip~ 43 (103)
T 3eme_A 30 TAMGYIPNAKLIPM 43 (103)
T ss_dssp HTTCBCTTCEECCG
T ss_pred HhcCcCCCCEEcCH
Confidence 56899999976643
No 72
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=68.96 E-value=0.72 Score=28.49 Aligned_cols=14 Identities=29% Similarity=0.567 Sum_probs=11.5
Q ss_pred EeCCccccceEEEE
Q psy8351 60 YNAGHVLGAAMFLI 73 (103)
Q Consensus 60 ~~AGHIlGsa~~~i 73 (103)
|.+||||||..+-+
T Consensus 29 ~~~ghIpgA~nip~ 42 (134)
T 3g5j_A 29 YEEDHILNAINMPL 42 (134)
T ss_dssp HHHCCCTTCEECCS
T ss_pred HhcCCCCCCEEcCc
Confidence 46899999988755
No 73
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=68.15 E-value=0.76 Score=28.22 Aligned_cols=14 Identities=7% Similarity=-0.036 Sum_probs=10.8
Q ss_pred EeCCccccceEEEE
Q psy8351 60 YNAGHVLGAAMFLI 73 (103)
Q Consensus 60 ~~AGHIlGsa~~~i 73 (103)
|.+|||+||..+-+
T Consensus 29 ~~~ghIpgA~~ip~ 42 (127)
T 3i2v_A 29 VDICRLPHALHIPL 42 (127)
T ss_dssp HHHCCCTTSEECCH
T ss_pred hhheecCCceeCCh
Confidence 45799999977644
No 74
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=67.75 E-value=1.1 Score=27.38 Aligned_cols=12 Identities=17% Similarity=0.238 Sum_probs=9.9
Q ss_pred EeCCccccceEE
Q psy8351 60 YNAGHVLGAAMF 71 (103)
Q Consensus 60 ~~AGHIlGsa~~ 71 (103)
|.+|||+||..+
T Consensus 30 ~~~ghIpgA~~i 41 (103)
T 3iwh_A 30 TAMGYIPNAKLI 41 (103)
T ss_dssp HTTCBCTTCEEC
T ss_pred HhcCccCCcccC
Confidence 568999999765
No 75
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=67.56 E-value=1.1 Score=26.69 Aligned_cols=14 Identities=21% Similarity=0.285 Sum_probs=10.8
Q ss_pred EeCCccccceEEEE
Q psy8351 60 YNAGHVLGAAMFLI 73 (103)
Q Consensus 60 ~~AGHIlGsa~~~i 73 (103)
|..|||+||..+-+
T Consensus 30 ~~~ghIpgA~~ip~ 43 (100)
T 3foj_A 30 TAMGIIPGAETIPM 43 (100)
T ss_dssp HTTCBCTTCEECCG
T ss_pred HhcCcCCCCEECCH
Confidence 56899999977643
No 76
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=65.23 E-value=1.8 Score=32.02 Aligned_cols=12 Identities=25% Similarity=0.498 Sum_probs=10.0
Q ss_pred eCCccccceEEE
Q psy8351 61 NAGHVLGAAMFL 72 (103)
Q Consensus 61 ~AGHIlGsa~~~ 72 (103)
.+||||||..+-
T Consensus 227 r~GHIPGA~nlP 238 (327)
T 3utn_X 227 PSGHIPGTQPLP 238 (327)
T ss_dssp CCCBCTTEEECC
T ss_pred cCCCCCCCcccC
Confidence 589999998764
No 77
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=65.15 E-value=1.1 Score=27.13 Aligned_cols=14 Identities=50% Similarity=0.968 Sum_probs=10.9
Q ss_pred EeCCccccceEEEE
Q psy8351 60 YNAGHVLGAAMFLI 73 (103)
Q Consensus 60 ~~AGHIlGsa~~~i 73 (103)
|.+|||+||..+-+
T Consensus 25 ~~~ghIpgAi~ip~ 38 (106)
T 3hix_A 25 YNDGHIMGAMAMPI 38 (106)
T ss_dssp HHTCEETTCEECCG
T ss_pred HhcCcCCCCEeCCH
Confidence 56899999987643
No 78
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=64.80 E-value=0.83 Score=27.61 Aligned_cols=13 Identities=23% Similarity=0.439 Sum_probs=10.5
Q ss_pred EeCCccccceEEE
Q psy8351 60 YNAGHVLGAAMFL 72 (103)
Q Consensus 60 ~~AGHIlGsa~~~ 72 (103)
|.+|||+||..+-
T Consensus 32 ~~~ghIpgA~~ip 44 (108)
T 1gmx_A 32 FAMGHAVQAFHLT 44 (108)
T ss_dssp HHHCEETTCEECC
T ss_pred HHhCCCccCEeCC
Confidence 5689999998664
No 79
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=63.97 E-value=1.4 Score=28.41 Aligned_cols=14 Identities=7% Similarity=0.228 Sum_probs=11.1
Q ss_pred EeCCccccceEEEE
Q psy8351 60 YNAGHVLGAAMFLI 73 (103)
Q Consensus 60 ~~AGHIlGsa~~~i 73 (103)
|.+|||+||..+-+
T Consensus 35 y~~gHIpGAinip~ 48 (152)
T 2j6p_A 35 RDCGFIVNSINMPT 48 (152)
T ss_dssp GGGCBCTTCEECCT
T ss_pred hCcCcCCCcEECCh
Confidence 67899999977643
No 80
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=63.69 E-value=1.2 Score=27.04 Aligned_cols=14 Identities=21% Similarity=0.430 Sum_probs=10.8
Q ss_pred EeCCccccceEEEE
Q psy8351 60 YNAGHVLGAAMFLI 73 (103)
Q Consensus 60 ~~AGHIlGsa~~~i 73 (103)
|..|||+||..+-+
T Consensus 28 ~~~ghIpgAi~ip~ 41 (110)
T 2k0z_A 28 YEELHLPNATLISV 41 (110)
T ss_dssp HHHSBCTTEEEEET
T ss_pred HhcCcCCCCEEcCH
Confidence 56899999977643
No 81
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=63.59 E-value=1.5 Score=26.65 Aligned_cols=14 Identities=14% Similarity=0.107 Sum_probs=10.6
Q ss_pred EeCCccccceEEEE
Q psy8351 60 YNAGHVLGAAMFLI 73 (103)
Q Consensus 60 ~~AGHIlGsa~~~i 73 (103)
|..|||+||..+-+
T Consensus 29 ~~~ghIpgA~~ip~ 42 (108)
T 3gk5_A 29 LIFGSIANSINIPI 42 (108)
T ss_dssp HTTCBCTTCEECCH
T ss_pred HhcCcCCCCEEcCH
Confidence 46799999976643
No 82
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=62.57 E-value=1 Score=25.94 Aligned_cols=13 Identities=38% Similarity=0.514 Sum_probs=10.1
Q ss_pred EeCCccccceEEE
Q psy8351 60 YNAGHVLGAAMFL 72 (103)
Q Consensus 60 ~~AGHIlGsa~~~ 72 (103)
|.+|||+||..+-
T Consensus 13 ~~~ghIpgA~~ip 25 (85)
T 2jtq_A 13 YQQEHVQGAINIP 25 (85)
T ss_dssp HTTEEETTCEECC
T ss_pred HHhCCCCCCEEcC
Confidence 4579999997664
No 83
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=62.16 E-value=0.79 Score=28.54 Aligned_cols=15 Identities=33% Similarity=0.530 Sum_probs=11.6
Q ss_pred EEeCCccccceEEEE
Q psy8351 59 AYNAGHVLGAAMFLI 73 (103)
Q Consensus 59 ~~~AGHIlGsa~~~i 73 (103)
-|.+|||+||..+-+
T Consensus 35 e~~~ghIpgA~~ip~ 49 (142)
T 2ouc_A 35 EYNKSHIQGAVHINC 49 (142)
T ss_dssp HHHHEEETTCEECCC
T ss_pred HhhhhhccCccccCc
Confidence 356899999987654
No 84
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=59.52 E-value=2 Score=28.51 Aligned_cols=45 Identities=18% Similarity=0.140 Sum_probs=23.6
Q ss_pred CCCCHHHHHHHHhhccc-ccCCcEEEeCCEEEEEEeCCccccceEEE
Q psy8351 27 MLYTESDLEKSMDKIET-INFHEEKDVNGIKFSAYNAGHVLGAAMFL 72 (103)
Q Consensus 27 p~y~~~dv~~~~~~~~~-v~y~~~~~i~~~~v~~~~AGHIlGsa~~~ 72 (103)
+..+.+++.+.++.=.. -+..+.+-||=-. .-|.+||||||..+-
T Consensus 31 ~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAiniP 76 (169)
T 3f4a_A 31 KYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGWHYA 76 (169)
T ss_dssp EEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCEECC
T ss_pred cEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCEECC
Confidence 44678888887764210 0111122121011 236789999998763
No 85
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=59.50 E-value=1.6 Score=28.18 Aligned_cols=47 Identities=15% Similarity=0.156 Sum_probs=23.7
Q ss_pred CCCCCHHHHHHHHhhcccccCCcEEEe-CCEEEEEEeCCccccceEEEE
Q psy8351 26 QMLYTESDLEKSMDKIETINFHEEKDV-NGIKFSAYNAGHVLGAAMFLI 73 (103)
Q Consensus 26 ~p~y~~~dv~~~~~~~~~v~y~~~~~i-~~~~v~~~~AGHIlGsa~~~i 73 (103)
.+.-+.+++.+.++.-.. +-.+.+.+ |=-.-.-|.+|||+||..+-+
T Consensus 22 ~~~is~~el~~~l~~~~~-~~~~~~~liDvR~~~e~~~ghIpgAinip~ 69 (161)
T 1c25_A 22 LKYISPEIMASVLNGKFA-NLIKEFVIIDCRYPYEYEGGHIKGAVNLHM 69 (161)
T ss_dssp SCEECHHHHHHHHTTTTT-TTEEEEEEEECSCHHHHHTCEETTCEECCS
T ss_pred cceeCHHHHHHHHhcccc-ccCCCeEEEECCChHHccCCcccCcEeCCh
Confidence 345677888877653100 00012222 100112367899999987644
No 86
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=58.68 E-value=0.81 Score=29.25 Aligned_cols=15 Identities=27% Similarity=0.401 Sum_probs=11.9
Q ss_pred EEeCCccccceEEEE
Q psy8351 59 AYNAGHVLGAAMFLI 73 (103)
Q Consensus 59 ~~~AGHIlGsa~~~i 73 (103)
-|.+|||+||..+-+
T Consensus 44 ey~~gHIpgAinip~ 58 (154)
T 1hzm_A 44 LYESSHIESAINVAI 58 (154)
T ss_dssp HHHHHTSSSCCCCCC
T ss_pred HHhhccccCceEeCc
Confidence 357899999987754
No 87
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=58.36 E-value=1.5 Score=27.59 Aligned_cols=43 Identities=16% Similarity=0.064 Sum_probs=22.6
Q ss_pred CCCCCHHHHHHHHhhcccccCCcEEEeCCEEEEEEeCCccccceEEE
Q psy8351 26 QMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFL 72 (103)
Q Consensus 26 ~p~y~~~dv~~~~~~~~~v~y~~~~~i~~~~v~~~~AGHIlGsa~~~ 72 (103)
.+..+.+++.+.++.- -.+.+-||=-.-.-|.+|||+||..+-
T Consensus 22 ~~~is~~el~~~l~~~----~~~~~liDvR~~~e~~~ghIpgAinip 64 (139)
T 3d1p_A 22 IQSYSFEDMKRIVGKH----DPNVVLVDVREPSEYSIVHIPASINVP 64 (139)
T ss_dssp CEECCHHHHHHHHHHT----CTTEEEEECSCHHHHHHCCCTTCEECC
T ss_pred cceecHHHHHHHHhCC----CCCeEEEECcCHHHHhCCCCCCcEEcC
Confidence 3456888888877531 001111110011125679999997653
No 88
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=57.95 E-value=1.9 Score=27.89 Aligned_cols=15 Identities=13% Similarity=0.142 Sum_probs=11.9
Q ss_pred EEeCCccccceEEEE
Q psy8351 59 AYNAGHVLGAAMFLI 73 (103)
Q Consensus 59 ~~~AGHIlGsa~~~i 73 (103)
-|.+|||+||..+-.
T Consensus 43 ey~~gHI~gainip~ 57 (157)
T 1whb_A 43 DYQDSCILHSLSVPE 57 (157)
T ss_dssp HHHHCCBTTCEEECS
T ss_pred HHHhccccCCcccCH
Confidence 378999999987643
No 89
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=57.81 E-value=1.8 Score=28.40 Aligned_cols=47 Identities=9% Similarity=0.035 Sum_probs=23.4
Q ss_pred CCCCCHHHHHHHHhhcccccCCcEEEe-CCEEEEEEeCCccccceEEEE
Q psy8351 26 QMLYTESDLEKSMDKIETINFHEEKDV-NGIKFSAYNAGHVLGAAMFLI 73 (103)
Q Consensus 26 ~p~y~~~dv~~~~~~~~~v~y~~~~~i-~~~~v~~~~AGHIlGsa~~~i 73 (103)
.+.-+.+++.+.++.-..- -.+.+.+ |=-.-.-|.+|||+||..+-+
T Consensus 23 ~~~is~~el~~~l~~~~~~-~~~~~~liDvR~~~ey~~ghIpgAinip~ 70 (175)
T 2a2k_A 23 LKYISPETMVALLTGKFSN-IVDKFVIVDCRYPYEYEGGHIKTAVNLPL 70 (175)
T ss_dssp SCEECHHHHHHHHTTTTTT-TEEEEEEEECSCHHHHHTCEETTCEECCS
T ss_pred CceeCHHHHHHHHhccccc-CCCCEEEEECCCHHHHcCCcCCCcEECCh
Confidence 3456778887776531000 0011222 100111356899999987644
No 90
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=57.69 E-value=2.7 Score=31.61 Aligned_cols=14 Identities=29% Similarity=0.228 Sum_probs=11.9
Q ss_pred EeCCccccceEEEE
Q psy8351 60 YNAGHVLGAAMFLI 73 (103)
Q Consensus 60 ~~AGHIlGsa~~~i 73 (103)
|.+||||||..+-+
T Consensus 40 y~~gHIPgAv~~~~ 53 (423)
T 2wlr_A 40 GPSGHELAALNLSA 53 (423)
T ss_dssp CCCSBCTTCEECCG
T ss_pred cccCCCCCCccCCH
Confidence 56899999998865
No 91
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=54.63 E-value=1.6 Score=27.83 Aligned_cols=14 Identities=36% Similarity=0.506 Sum_probs=11.3
Q ss_pred EeCCccccceEEEE
Q psy8351 60 YNAGHVLGAAMFLI 73 (103)
Q Consensus 60 ~~AGHIlGsa~~~i 73 (103)
|.+|||+||..+-+
T Consensus 33 y~~gHIpgAinip~ 46 (153)
T 2vsw_A 33 YNTSHILEAININC 46 (153)
T ss_dssp HHHCEETTCEECCC
T ss_pred hccCccCCCeeeCh
Confidence 56899999987644
No 92
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=53.86 E-value=2.1 Score=26.75 Aligned_cols=41 Identities=15% Similarity=0.064 Sum_probs=23.3
Q ss_pred CCCCCHHHHHHHHhhcccccCCcEEEeCCEEEEEEeCCccccceEEEE
Q psy8351 26 QMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLI 73 (103)
Q Consensus 26 ~p~y~~~dv~~~~~~~~~v~y~~~~~i~~~~v~~~~AGHIlGsa~~~i 73 (103)
.+..+.+++.+.++. . + .-+++.. -.-|.+|||+||..+-+
T Consensus 17 ~~~is~~e~~~~l~~--~--~-~lIDvR~--~~e~~~ghIpgAinip~ 57 (129)
T 1tq1_A 17 PSSVSVTVAHDLLLA--G--H-RYLDVRT--PEEFSQGHACGAINVPY 57 (129)
T ss_dssp CEEEEHHHHHHHHHH--T--C-CEEEESC--HHHHHHCCBTTBEECCS
T ss_pred CcccCHHHHHHHhcC--C--C-EEEECCC--HHHHhcCCCCCcEECcH
Confidence 345677888877751 1 0 2233311 01245899999987654
No 93
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=53.52 E-value=2 Score=29.32 Aligned_cols=15 Identities=40% Similarity=0.696 Sum_probs=11.6
Q ss_pred EeCCccccceEEEEE
Q psy8351 60 YNAGHVLGAAMFLIE 74 (103)
Q Consensus 60 ~~AGHIlGsa~~~i~ 74 (103)
|.+||||||..+-+.
T Consensus 18 y~~ghIpgAi~ip~~ 32 (230)
T 2eg4_A 18 YEAGHLPGARHLDLS 32 (230)
T ss_dssp HHHCBCTTCEECCCC
T ss_pred HhhCcCCCCEECCcc
Confidence 568999999877443
No 94
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=53.30 E-value=3.2 Score=26.75 Aligned_cols=15 Identities=20% Similarity=0.403 Sum_probs=11.6
Q ss_pred EEeCCccccceEEEE
Q psy8351 59 AYNAGHVLGAAMFLI 73 (103)
Q Consensus 59 ~~~AGHIlGsa~~~i 73 (103)
-|..|||+||..+-+
T Consensus 54 ey~~ghIpgAinip~ 68 (152)
T 1t3k_A 54 RNYDGHIAGSLHYAS 68 (152)
T ss_dssp HHHSSCCCSSEEECC
T ss_pred hccCccCCCCEECCH
Confidence 456899999987644
No 95
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=49.65 E-value=2.9 Score=28.51 Aligned_cols=14 Identities=29% Similarity=0.584 Sum_probs=11.2
Q ss_pred EeCCccccceEEEE
Q psy8351 60 YNAGHVLGAAMFLI 73 (103)
Q Consensus 60 ~~AGHIlGsa~~~i 73 (103)
|.+|||+||..+-+
T Consensus 77 y~~gHIpGAinip~ 90 (211)
T 1qb0_A 77 YEGGHIKTAVNLPL 90 (211)
T ss_dssp HHTCEETTCEECCS
T ss_pred HccCcCCCCEECCc
Confidence 66899999987644
No 96
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=49.59 E-value=2.5 Score=27.44 Aligned_cols=41 Identities=12% Similarity=0.102 Sum_probs=22.5
Q ss_pred CCCCHHHHHHHHhhcccccCCcEEEe-CCEEEEEEeCCccccceEEE
Q psy8351 27 MLYTESDLEKSMDKIETINFHEEKDV-NGIKFSAYNAGHVLGAAMFL 72 (103)
Q Consensus 27 p~y~~~dv~~~~~~~~~v~y~~~~~i-~~~~v~~~~AGHIlGsa~~~ 72 (103)
+..+.+++.+.++.- .+.+-+ |=-.-.-|.+|||+||..+-
T Consensus 20 ~~is~~~l~~~l~~~-----~~~~~liDvR~~~ey~~gHI~gAinip 61 (157)
T 2gwf_A 20 GAITAKELYTMMTDK-----NISLIIMDARRMQDYQDSCILHSLSVP 61 (157)
T ss_dssp CEECHHHHHHHHHST-----TSCEEEEECSCHHHHHHSCBTTCEECC
T ss_pred CccCHHHHHHHHhcC-----CCCeEEEECCCHHHHHhcCccCCcccC
Confidence 445777777776531 011222 10011147899999998764
No 97
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=49.22 E-value=2.6 Score=27.01 Aligned_cols=14 Identities=21% Similarity=0.162 Sum_probs=10.7
Q ss_pred EeCCccccceEEEE
Q psy8351 60 YNAGHVLGAAMFLI 73 (103)
Q Consensus 60 ~~AGHIlGsa~~~i 73 (103)
|.+|||+||..+-+
T Consensus 45 y~~ghIpgAinip~ 58 (144)
T 3nhv_A 45 YKECHIPTAISIPG 58 (144)
T ss_dssp HHHCBCTTCEECCG
T ss_pred HhcCCCCCCEECCH
Confidence 46899999977643
No 98
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=48.28 E-value=2.8 Score=27.07 Aligned_cols=16 Identities=31% Similarity=0.497 Sum_probs=12.2
Q ss_pred EEeCCccccceEEEEE
Q psy8351 59 AYNAGHVLGAAMFLIE 74 (103)
Q Consensus 59 ~~~AGHIlGsa~~~i~ 74 (103)
-|.+|||+||..+-+.
T Consensus 45 e~~~ghI~ga~~i~~~ 60 (158)
T 3tg1_B 45 EYNKSHIQGAVHINCA 60 (158)
T ss_dssp HHHHCCBTTCEECCCS
T ss_pred HHHhCCCCCceeechh
Confidence 3568999999877544
No 99
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=47.97 E-value=3.1 Score=25.70 Aligned_cols=13 Identities=15% Similarity=0.217 Sum_probs=10.5
Q ss_pred EeCCccccceEEE
Q psy8351 60 YNAGHVLGAAMFL 72 (103)
Q Consensus 60 ~~AGHIlGsa~~~ 72 (103)
+..|||+||..+-
T Consensus 45 ~~~ghIpgA~nip 57 (124)
T 3flh_A 45 VKKDQIKGAIAMP 57 (124)
T ss_dssp HHCCEETTCEECC
T ss_pred HhcCcCCCCEECC
Confidence 3899999997653
No 100
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=47.95 E-value=2.8 Score=30.09 Aligned_cols=14 Identities=36% Similarity=0.662 Sum_probs=11.6
Q ss_pred EEeCCccccceEEE
Q psy8351 59 AYNAGHVLGAAMFL 72 (103)
Q Consensus 59 ~~~AGHIlGsa~~~ 72 (103)
-|.+||||||..+-
T Consensus 61 ey~~gHIpGAi~i~ 74 (302)
T 3olh_A 61 EFEERHIPGAAFFD 74 (302)
T ss_dssp HHHHSCCTTCEECC
T ss_pred HHhhCcCCCCeEeC
Confidence 46789999999873
No 101
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=47.19 E-value=2.5 Score=27.01 Aligned_cols=14 Identities=50% Similarity=0.968 Sum_probs=10.9
Q ss_pred EeCCccccceEEEE
Q psy8351 60 YNAGHVLGAAMFLI 73 (103)
Q Consensus 60 ~~AGHIlGsa~~~i 73 (103)
|.+|||+||..+-+
T Consensus 29 ~~~ghIpgAi~ip~ 42 (141)
T 3ilm_A 29 YNDGHIMGAMAMPI 42 (141)
T ss_dssp HHHCEETTCEECCG
T ss_pred HhCCCCCCCEEcCH
Confidence 56899999987643
No 102
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=47.09 E-value=2.9 Score=26.09 Aligned_cols=40 Identities=13% Similarity=0.029 Sum_probs=21.1
Q ss_pred CCCCHHHHHHHHhhcccccCCc--EEEeCCEEEEEEeC-CccccceEEE
Q psy8351 27 MLYTESDLEKSMDKIETINFHE--EKDVNGIKFSAYNA-GHVLGAAMFL 72 (103)
Q Consensus 27 p~y~~~dv~~~~~~~~~v~y~~--~~~i~~~~v~~~~A-GHIlGsa~~~ 72 (103)
+..+.+++.+.++.- -.+ -+++. .-.-|.. |||+||..+-
T Consensus 22 ~~is~~~l~~~l~~~----~~~~~liDvR--~~~e~~~~ghIpgA~~ip 64 (139)
T 2hhg_A 22 ETLTTADAIALHKSG----ASDVVIVDIR--DPREIERDGKIPGSFSCT 64 (139)
T ss_dssp EEECHHHHHHHHHTT----CTTEEEEECS--CHHHHHHHCCCTTCEECC
T ss_pred CccCHHHHHHHHhcc----CCCeEEEECC--CHHHHHhCCCCCCeEECC
Confidence 445778887776520 001 11221 0112456 9999998763
No 103
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=46.88 E-value=3.6 Score=28.68 Aligned_cols=15 Identities=33% Similarity=0.507 Sum_probs=11.9
Q ss_pred EEeCCccccceEEEE
Q psy8351 59 AYNAGHVLGAAMFLI 73 (103)
Q Consensus 59 ~~~AGHIlGsa~~~i 73 (103)
-|.+|||+||..+-+
T Consensus 33 ey~~ghIpgA~~ip~ 47 (277)
T 3aay_A 33 AYDRDHIAGAIKLDW 47 (277)
T ss_dssp HHHHCBSTTCEEEET
T ss_pred hHhhCCCCCcEEecc
Confidence 367899999987754
No 104
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=46.34 E-value=3 Score=29.20 Aligned_cols=14 Identities=50% Similarity=0.847 Sum_probs=11.3
Q ss_pred EeCCccccceEEEE
Q psy8351 60 YNAGHVLGAAMFLI 73 (103)
Q Consensus 60 ~~AGHIlGsa~~~i 73 (103)
|.+|||+||..+-+
T Consensus 41 ~~~ghIpgAi~ip~ 54 (280)
T 1urh_A 41 YLNGHIPGAVFFDI 54 (280)
T ss_dssp HHHSBCTTCEECCG
T ss_pred hhhCcCCCCEECCH
Confidence 67899999987644
No 105
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=44.20 E-value=4.7 Score=29.14 Aligned_cols=14 Identities=36% Similarity=0.629 Sum_probs=11.9
Q ss_pred EeCCccccceEEEE
Q psy8351 60 YNAGHVLGAAMFLI 73 (103)
Q Consensus 60 ~~AGHIlGsa~~~i 73 (103)
|.+|||+||..+-+
T Consensus 68 y~~gHIpGAi~ip~ 81 (318)
T 3hzu_A 68 YDVGHIPGAVKIDW 81 (318)
T ss_dssp GGGCBCTTEEECCH
T ss_pred HhcCcCCCCeEeCc
Confidence 78999999988754
No 106
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=43.38 E-value=4.4 Score=28.35 Aligned_cols=15 Identities=33% Similarity=0.565 Sum_probs=12.0
Q ss_pred EEeCCccccceEEEE
Q psy8351 59 AYNAGHVLGAAMFLI 73 (103)
Q Consensus 59 ~~~AGHIlGsa~~~i 73 (103)
-|.+|||+||..+-+
T Consensus 35 e~~~ghIpgA~~ip~ 49 (285)
T 1uar_A 35 LYDTGHIPGAQKIDW 49 (285)
T ss_dssp HHHHCBCTTCEEECH
T ss_pred hhhcCcCCCCEECCc
Confidence 367899999987754
No 107
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=42.56 E-value=4.2 Score=28.16 Aligned_cols=43 Identities=19% Similarity=0.200 Sum_probs=22.5
Q ss_pred CCCHHHHHHHHhhcccccCCcEEEeCCEEEE---EEeCCccccceEEEE
Q psy8351 28 LYTESDLEKSMDKIETINFHEEKDVNGIKFS---AYNAGHVLGAAMFLI 73 (103)
Q Consensus 28 ~y~~~dv~~~~~~~~~v~y~~~~~i~~~~v~---~~~AGHIlGsa~~~i 73 (103)
.-+.+++.+.++.-.. +..+.+.+ +.|+ -|.+|||+||..+-.
T Consensus 58 ~Is~~eL~~~l~~~~~-~~~~~~~l--IDVR~~~Ey~~GHIpGAinIP~ 103 (216)
T 3op3_A 58 YVNPETVAALLSGKFQ-GLIEKFYV--IDCRYPYEYLGGHIQGALNLYS 103 (216)
T ss_dssp EECHHHHHHHHTTTTT-TTEEEEEE--EECSCHHHHHTSEETTCEECCS
T ss_pred EeCHHHHHHHHhCCCc-cccCCEEE--EEeCcHHHHhcCCccCCEECCh
Confidence 3467777777653100 00012222 1222 256899999987644
No 108
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=41.90 E-value=4 Score=28.37 Aligned_cols=15 Identities=33% Similarity=0.530 Sum_probs=11.6
Q ss_pred EEeCCccccceEEEE
Q psy8351 59 AYNAGHVLGAAMFLI 73 (103)
Q Consensus 59 ~~~AGHIlGsa~~~i 73 (103)
-|..|||+||..+-+
T Consensus 35 ey~~ghIpgA~~ip~ 49 (271)
T 1e0c_A 35 RYAEGHIPGARFVDP 49 (271)
T ss_dssp HHHHCBSTTCEECCG
T ss_pred hhhhCcCCCCEECCH
Confidence 367899999987743
No 109
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=41.22 E-value=4.1 Score=28.91 Aligned_cols=16 Identities=50% Similarity=0.692 Sum_probs=12.2
Q ss_pred EEeCCccccceEEEEE
Q psy8351 59 AYNAGHVLGAAMFLIE 74 (103)
Q Consensus 59 ~~~AGHIlGsa~~~i~ 74 (103)
-|.+|||+||..+-+.
T Consensus 46 ey~~gHIpGAi~ip~~ 61 (296)
T 1rhs_A 46 EYLERHVPGASFFDIE 61 (296)
T ss_dssp HHHHSBCTTCEECCTT
T ss_pred hHhhCcCCCCEEeCHH
Confidence 3678999999876543
No 110
>4h62_V Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; HET: MES; 3.00A {Saccharomyces cerevisiae}
Probab=39.71 E-value=14 Score=17.55 Aligned_cols=16 Identities=19% Similarity=0.353 Sum_probs=11.3
Q ss_pred CCCCHHHHHHHHhhcc
Q psy8351 27 MLYTESDLEKSMDKIE 42 (103)
Q Consensus 27 p~y~~~dv~~~~~~~~ 42 (103)
.-|+++++++++++++
T Consensus 7 trfdekqieelldnci 22 (31)
T 4h62_V 7 TRFDEKQIEELLDNCI 22 (31)
T ss_dssp ---CHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHH
Confidence 4589999999998865
No 111
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=37.34 E-value=4.6 Score=30.04 Aligned_cols=15 Identities=27% Similarity=0.299 Sum_probs=11.8
Q ss_pred EeCCccccceEEEEE
Q psy8351 60 YNAGHVLGAAMFLIE 74 (103)
Q Consensus 60 ~~AGHIlGsa~~~i~ 74 (103)
|.+|||+||..+-+.
T Consensus 47 y~~gHIpGAi~ip~~ 61 (373)
T 1okg_A 47 YAKEHVKSAIRADVD 61 (373)
T ss_dssp HHHCEETTCEECCTT
T ss_pred HhhCcCCCCEEeCch
Confidence 668999999877543
No 112
>3njn_A Peptidase; structural genomics, autocatalysis, PSI- protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 1.25A {Shewanella oneidensis} PDB: 3n55_A 2ai4_A 3njm_A 3nji_A 3njf_A 3njg_A 3njk_A 3njl_A 3njj_A 3njh_A
Probab=31.96 E-value=57 Score=20.77 Aligned_cols=31 Identities=13% Similarity=0.267 Sum_probs=24.9
Q ss_pred cCCcE---EEe--CCEEEEEEeCCccccceEEEEEE
Q psy8351 45 NFHEE---KDV--NGIKFSAYNAGHVLGAAMFLIEI 75 (103)
Q Consensus 45 ~y~~~---~~i--~~~~v~~~~AGHIlGsa~~~i~~ 75 (103)
||++- +++ +|-.+.+.+..+.+|.+.|.+-.
T Consensus 71 Pfd~~Idsv~iS~dG~~i~lvD~D~~~Gtt~fqfV~ 106 (119)
T 3njn_A 71 PFDGIIDAVTISSDGMLVQLVDLDKTPGTTKFQFVL 106 (119)
T ss_dssp TTSSSCCEEEECTTSSEEEEEECCCSCEEEEEEEEE
T ss_pred ccccceeEEEEcCCCcEEEEEEcCCCCCeEEEEEEE
Confidence 56654 556 68999999999999999987654
No 113
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=31.16 E-value=77 Score=23.62 Aligned_cols=27 Identities=26% Similarity=0.496 Sum_probs=23.9
Q ss_pred CEEEEEEeCCccccceEEEEEECCeEE
Q psy8351 54 GIKFSAYNAGHVLGAAMFLIEIAGVKI 80 (103)
Q Consensus 54 ~~~v~~~~AGHIlGsa~~~i~~~~~~i 80 (103)
.+++++..+|.-.|..+++|+.++.++
T Consensus 11 ~m~i~~LG~~~~vg~s~~li~~~~~~i 37 (459)
T 2i7t_A 11 QLLIRPLGAGQEVGRSCIILEFKGRKI 37 (459)
T ss_dssp EEEEEEEESSSSSSSCEEEEEETTEEE
T ss_pred eEEEEEEecCCCCCCCEEEEEECCeEE
Confidence 489999999998888889999988877
No 114
>3oka_C N-terminal His-affinity TAG; GT-B fold, alpha-mannosyltransferase, GDP-MAN binding, trans; HET: GDD; 2.20A {Escherichia coli}
Probab=24.59 E-value=19 Score=15.64 Aligned_cols=8 Identities=38% Similarity=0.804 Sum_probs=5.7
Q ss_pred EeCCcccc
Q psy8351 60 YNAGHVLG 67 (103)
Q Consensus 60 ~~AGHIlG 67 (103)
..+|||-|
T Consensus 12 hssghieg 19 (21)
T 3oka_C 12 HSSGHIEG 19 (26)
T ss_pred cccccccc
Confidence 46788866
No 115
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=23.86 E-value=1.4e+02 Score=21.75 Aligned_cols=27 Identities=7% Similarity=0.096 Sum_probs=22.2
Q ss_pred CEEEEEEeCCccccceEEEEEECCeEE
Q psy8351 54 GIKFSAYNAGHVLGAAMFLIEIAGVKI 80 (103)
Q Consensus 54 ~~~v~~~~AGHIlGsa~~~i~~~~~~i 80 (103)
.++++|+.++.-.|..+++|+.++..+
T Consensus 6 ~m~i~~lG~~~~~g~n~~li~~~~~~i 32 (429)
T 2az4_A 6 KTTVTFHSGILTIGGTVIEVAYKDAHI 32 (429)
T ss_dssp CEEEEEEECTTSSSCCEEEEEETTEEE
T ss_pred ceEEEEeeCCCccCCeEEEEEECCeEE
Confidence 478999998887777778999888776
No 116
>1bh9_B TAFII28; histone fold, tata binding protein, transcription regulation complex; HET: PMB; 2.60A {Homo sapiens} SCOP: a.22.1.3 PDB: 1bh8_B*
Probab=22.48 E-value=1.3e+02 Score=17.84 Aligned_cols=37 Identities=8% Similarity=0.135 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHhhcc
Q psy8351 6 KAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIE 42 (103)
Q Consensus 6 ~~l~~~lL~D~~ki~~~~~~~p~y~~~dv~~~~~~~~ 42 (103)
+.+.--|.+-++.++...++..|...+++.+++.+++
T Consensus 47 KvfVgelVE~A~~V~~~~~~~~Pl~P~HireA~rrl~ 83 (89)
T 1bh9_B 47 KVFVGEVVEEALDVCEKWGEMPPLQPKHMREAVRRLK 83 (89)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHH
Confidence 3334445555777887766777889999999988765
No 117
>1lbj_A Motilin; A-helix, B-turn of type I, hormone/growth factor complex; NMR {Synthetic} SCOP: j.6.1.1
Probab=21.50 E-value=75 Score=14.67 Aligned_cols=15 Identities=20% Similarity=0.419 Sum_probs=12.0
Q ss_pred CCCCCHHHHHHHHhh
Q psy8351 26 QMLYTESDLEKSMDK 40 (103)
Q Consensus 26 ~p~y~~~dv~~~~~~ 40 (103)
.|.|+..|+.++.++
T Consensus 2 vPiFt~selqr~qEk 16 (26)
T 1lbj_A 2 VPIFTYGELQRMQEK 16 (26)
T ss_dssp CCTTCHHHHHHHHHH
T ss_pred CceeeHHHHHHHHHH
Confidence 478999999888764
No 118
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=21.23 E-value=20 Score=27.77 Aligned_cols=38 Identities=21% Similarity=0.211 Sum_probs=21.7
Q ss_pred CCCCHHHHHHHHhh---cccccCCcEEEeCCEEEEEEeCCccccceEEE
Q psy8351 27 MLYTESDLEKSMDK---IETINFHEEKDVNGIKFSAYNAGHVLGAAMFL 72 (103)
Q Consensus 27 p~y~~~dv~~~~~~---~~~v~y~~~~~i~~~~v~~~~AGHIlGsa~~~ 72 (103)
+..+.+++.+.++. +.-+ ++.. -.-|..|||+||..+-
T Consensus 7 ~~is~~~l~~~l~~~~~~~li------DvR~--~~e~~~ghIpgAv~ip 47 (539)
T 1yt8_A 7 AVRTFHDIRAALLARRELALL------DVRE--EDPFAQAHPLFAANLP 47 (539)
T ss_dssp EEECHHHHHHHHHHTCCBEEE------ECSC--HHHHTTSBCTTCEECC
T ss_pred cccCHHHHHHHHhCCCCeEEE------ECCC--HHHHhcCcCCCCEECC
Confidence 34567777777652 1111 2210 1236789999998764
Done!