RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy8351
         (103 letters)



>d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein
           2, CFT2 {Baker's yeast (Saccharomyces cerevisiae)
           [TaxId: 4932]}
          Length = 514

 Score = 65.6 bits (159), Expect = 1e-14
 Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 6/86 (6%)

Query: 1   MTHATKAIYRWLLSDYIKVSNI--STEQMLYTESDLEKSMDKIETINFHEEKDV----NG 54
            T     + R    D    + +    +       D+E S D I  + + +  D+    +G
Sbjct: 89  ATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDG 148

Query: 55  IKFSAYNAGHVLGAAMFLIEIAGVKI 80
           +   AYNAG   G +++ I     K+
Sbjct: 149 LTLLAYNAGVCPGGSIWCISTYSEKL 174


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.133    0.385 

Gapped
Lambda     K      H
   0.267   0.0639    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 370,243
Number of extensions: 14577
Number of successful extensions: 43
Number of sequences better than 10.0: 1
Number of HSP's gapped: 42
Number of HSP's successfully gapped: 7
Length of query: 103
Length of database: 2,407,596
Length adjustment: 64
Effective length of query: 39
Effective length of database: 1,528,876
Effective search space: 59626164
Effective search space used: 59626164
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.1 bits)