BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8357
(276 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q76LL6|FHOD3_MOUSE FH1/FH2 domain-containing protein 3 OS=Mus musculus GN=Fhod3 PE=1
SV=1
Length = 1578
Score = 195 bits (496), Expect = 2e-49, Method: Composition-based stats.
Identities = 91/132 (68%), Positives = 108/132 (81%)
Query: 145 LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
L ALGQ+MLYVDGM G+++H T+QWLY LV SKFRLV+KTALKLLL+FVEY ESN LL
Sbjct: 169 LRALGQIMLYVDGMNGVINHSETIQWLYTLVGSKFRLVVKTALKLLLVFVEYSESNAPLL 228
Query: 205 IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
IQAV AVD G PWSNIM +L ++D DTELL+YAM+L+NKTL G+PDQD++YD VD
Sbjct: 229 IQAVSAVDTKRGVKPWSNIMEILEEKDGVDTELLVYAMTLVNKTLAGLPDQDTFYDVVDC 288
Query: 265 LEEQGIAAVIRR 276
LEE GIAAV +R
Sbjct: 289 LEELGIAAVSQR 300
Score = 185 bits (470), Expect = 3e-46, Method: Composition-based stats.
Identities = 88/131 (67%), Positives = 105/131 (80%), Gaps = 1/131 (0%)
Query: 1 MLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAV 60
MLYVDGM G+++H T+QWLY LV SKFRLV+KTALKLLL+FVEY ESN LLIQAV AV
Sbjct: 176 MLYVDGMNGVINHSETIQWLYTLVGSKFRLVVKTALKLLLVFVEYSESNAPLLIQAVSAV 235
Query: 61 DNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIA 120
D G PWSNIM +L ++D DTELL+YAM+L+NKTL G+PDQD++YD VD LEE GIA
Sbjct: 236 DTKRGVKPWSNIMEILEEKDGVDTELLVYAMTLVNKTLAGLPDQDTFYDVVDCLEELGIA 295
Query: 121 AVI-RSLDQHG 130
AV R L++ G
Sbjct: 296 AVSQRHLNKKG 306
>sp|Q2V2M9|FHOD3_HUMAN FH1/FH2 domain-containing protein 3 OS=Homo sapiens GN=FHOD3 PE=1
SV=2
Length = 1422
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/132 (67%), Positives = 108/132 (81%)
Query: 145 LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
L ALGQ+MLYVDGM G+++ T+QWLY L+ SKFRLV+KTALKLLL+FVEY ESN LL
Sbjct: 169 LRALGQIMLYVDGMNGVINRNETIQWLYTLIGSKFRLVVKTALKLLLVFVEYSESNAPLL 228
Query: 205 IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
IQAV AVD G PWSNIM +L ++D DTELL+YAM+L+NKTL+G+PDQD++YD VD
Sbjct: 229 IQAVTAVDTKRGVKPWSNIMEILEEKDGVDTELLVYAMTLVNKTLSGLPDQDTFYDVVDC 288
Query: 265 LEEQGIAAVIRR 276
LEE GIAAV +R
Sbjct: 289 LEELGIAAVSQR 300
Score = 179 bits (454), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/131 (65%), Positives = 105/131 (80%), Gaps = 1/131 (0%)
Query: 1 MLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAV 60
MLYVDGM G+++ T+QWLY L+ SKFRLV+KTALKLLL+FVEY ESN LLIQAV AV
Sbjct: 176 MLYVDGMNGVINRNETIQWLYTLIGSKFRLVVKTALKLLLVFVEYSESNAPLLIQAVTAV 235
Query: 61 DNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIA 120
D G PWSNIM +L ++D DTELL+YAM+L+NKTL+G+PDQD++YD VD LEE GIA
Sbjct: 236 DTKRGVKPWSNIMEILEEKDGVDTELLVYAMTLVNKTLSGLPDQDTFYDVVDCLEELGIA 295
Query: 121 AVI-RSLDQHG 130
AV R L++ G
Sbjct: 296 AVSQRHLNKKG 306
>sp|Q9Y613|FHOD1_HUMAN FH1/FH2 domain-containing protein 1 OS=Homo sapiens GN=FHOD1 PE=1
SV=3
Length = 1164
Score = 167 bits (422), Expect = 1e-40, Method: Composition-based stats.
Identities = 74/132 (56%), Positives = 105/132 (79%)
Query: 145 LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
L ALGQ+ML+VDGM G++ H T+QWLY L AS RLV+KTALKLLL+FVEY E+N L
Sbjct: 181 LRALGQLMLFVDGMLGVVAHSDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLF 240
Query: 205 IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
I+AV++V ++ G PPW+N++ +L +++ D ELL+Y ++L+NKTL +PDQDS+YD DA
Sbjct: 241 IRAVNSVASTTGAPPWANLVSILEEKNGADPELLVYTVTLINKTLAALPDQDSFYDVTDA 300
Query: 265 LEEQGIAAVIRR 276
LE+QG+ A+++R
Sbjct: 301 LEQQGMEALVQR 312
Score = 156 bits (394), Expect = 2e-37, Method: Composition-based stats.
Identities = 68/124 (54%), Positives = 98/124 (79%)
Query: 1 MLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAV 60
ML+VDGM G++ H T+QWLY L AS RLV+KTALKLLL+FVEY E+N L I+AV++V
Sbjct: 188 MLFVDGMLGVVAHSDTIQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSV 247
Query: 61 DNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIA 120
++ G PPW+N++ +L +++ D ELL+Y ++L+NKTL +PDQDS+YD DALE+QG+
Sbjct: 248 ASTTGAPPWANLVSILEEKNGADPELLVYTVTLINKTLAALPDQDSFYDVTDALEQQGME 307
Query: 121 AVIR 124
A+++
Sbjct: 308 ALVQ 311
>sp|Q6P9Q4|FHOD1_MOUSE FH1/FH2 domain-containing protein 1 OS=Mus musculus GN=Fhod1 PE=2
SV=3
Length = 1197
Score = 167 bits (422), Expect = 1e-40, Method: Composition-based stats.
Identities = 76/132 (57%), Positives = 104/132 (78%)
Query: 145 LVALGQVMLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLL 204
L ALGQ+ML+VDGM G++ H TVQWLY L AS RLV+KTALKLLL+FVEY E+N L
Sbjct: 181 LRALGQLMLFVDGMLGVVAHSETVQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLF 240
Query: 205 IQAVHAVDNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDA 264
IQAV+AV ++ G PW+N++ +L +++ D ELL+Y ++L+NKTL +PDQDS+YD DA
Sbjct: 241 IQAVNAVASATGTLPWANLVSILEEKNGADAELLVYTVTLINKTLAALPDQDSFYDVTDA 300
Query: 265 LEEQGIAAVIRR 276
LE+QG+ A+++R
Sbjct: 301 LEQQGMEALVQR 312
Score = 155 bits (393), Expect = 2e-37, Method: Composition-based stats.
Identities = 70/124 (56%), Positives = 97/124 (78%)
Query: 1 MLYVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQAVHAV 60
ML+VDGM G++ H TVQWLY L AS RLV+KTALKLLL+FVEY E+N L IQAV+AV
Sbjct: 188 MLFVDGMLGVVAHSETVQWLYTLCASLSRLVVKTALKLLLVFVEYSENNAPLFIQAVNAV 247
Query: 61 DNSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIA 120
++ G PW+N++ +L +++ D ELL+Y ++L+NKTL +PDQDS+YD DALE+QG+
Sbjct: 248 ASATGTLPWANLVSILEEKNGADAELLVYTVTLINKTLAALPDQDSFYDVTDALEQQGME 307
Query: 121 AVIR 124
A+++
Sbjct: 308 ALVQ 311
>sp|Q1ZXK2|FORG_DICDI Formin-G OS=Dictyostelium discoideum GN=forG PE=1 SV=1
Length = 1074
Score = 48.5 bits (114), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 3 YVDGMTGIMDHPPTVQWLYVLVASKFRLVIKTALKLLLIFVEYVESNCFLLIQ-AVHAVD 61
YV M I P V+ L+ LV S V + AL+LL + ++ + F + A
Sbjct: 187 YVSAMEIITKTPHLVKQLFSLVDSNVVGVCRGALELLFVLCDFRKEEGFKSVHLAAKGTA 246
Query: 62 NSNGEPPWSNIMRLLTDRDSTDTELLIYAMSLLNKTLNGIPDQDSYYDQVDALEEQGIAA 121
+ G+ P+ N+++LL DS D E I A +LLN L+ P + E G+
Sbjct: 247 VAQGKKPYLNVIKLL---DSGDLETKINAFTLLNVLLSNCPTDEKVGKLCKKWGELGLDD 303
Query: 122 VIRSL 126
+RSL
Sbjct: 304 KLRSL 308
>sp|Q5EBF1|5NTC_XENTR Cytosolic purine 5'-nucleotidase OS=Xenopus tropicalis GN=nt5c2
PE=2 SV=1
Length = 568
Score = 31.6 bits (70), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 128 QHGIKYTTSSTDLPTEPLVALGQVMLYV-DGMTG-IMDHPPTVQWLYVLVASKFRLVIKT 185
QHGI Y+ S+D+ + L A G+ +LY+ D + G I+ W LV + +
Sbjct: 322 QHGIVYSGGSSDIVCDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPELAQELHV 381
Query: 186 ALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMR 225
+F E + FL H +SN P S+I R
Sbjct: 382 WTDKSSLFEELQSLDIFLAELYKHLDSSSNERPDISSIQR 421
>sp|Q6DKB0|5NTC_XENLA Cytosolic purine 5'-nucleotidase OS=Xenopus laevis GN=nt5c2 PE=2
SV=1
Length = 569
Score = 31.6 bits (70), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 128 QHGIKYTTSSTDLPTEPLVALGQVMLYV-DGMTG-IMDHPPTVQWLYVLVASKFRLVIKT 185
QHGI Y+ S+D+ + L A G+ +LY+ D + G I+ W LV + +
Sbjct: 322 QHGIVYSGGSSDILCDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPELAQELHV 381
Query: 186 ALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMR 225
+F E + FL H +SN P S+I R
Sbjct: 382 WTDKSSLFEELQSLDIFLAELYKHLDSSSNERPDISSIQR 421
>sp|Q5ZIZ4|5NTC_CHICK Cytosolic purine 5'-nucleotidase OS=Gallus gallus GN=NT5C2 PE=2
SV=1
Length = 569
Score = 31.2 bits (69), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Query: 128 QHGIKYTTSSTDLPTEPLVALGQVMLYV-DGMTG-IMDHPPTVQWLYVLVASKFRLVIKT 185
QHGI Y+ S+D + L A G+ +LY+ D + G I+ W LV + +
Sbjct: 322 QHGIVYSGGSSDTVCDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPELAQELHV 381
Query: 186 ALKLLLIFVEYVESNCFLLIQAVHAVDNSNGEPPWSNIMR 225
+F E + FL H +SN P S+I R
Sbjct: 382 WTDKSALFEELQSLDIFLAELYKHLDSSSNERPDISSIQR 421
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,656,737
Number of Sequences: 539616
Number of extensions: 3663418
Number of successful extensions: 8948
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 8940
Number of HSP's gapped (non-prelim): 18
length of query: 276
length of database: 191,569,459
effective HSP length: 116
effective length of query: 160
effective length of database: 128,974,003
effective search space: 20635840480
effective search space used: 20635840480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)