BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8358
(424 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3LS8|A Chain A, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4-
Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol
pdb|3LS8|B Chain B, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4-
Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol
Length = 614
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 158/356 (44%), Gaps = 36/356 (10%)
Query: 9 LSPQLEFIRVLINMSKTL----ASLRSKEAKTSRLLADLTTLNHNLPARVWLPLYSDQPH 64
L+ Q F+ L+++ K + + + K + LL D +N + + LPL +P
Sbjct: 277 LAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPL---EPQ 333
Query: 65 HIVR-IPPSAAAVLNSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGD 123
+R I P A + S + + E K I K GD
Sbjct: 334 VKIRGIIPETATLFKSALMPAQLFFKTEDGGK-------------------YPVIFKHGD 374
Query: 124 DXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKNSQ 183
D K+ E + L L PYK+L S G ++ + +V + ++ +++
Sbjct: 375 DLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQ-FIQSVPVAEVL-DTE 432
Query: 184 VSLLEYFIQEFGDINSEGFLAAQ--KNFVQSTAAYSLVCYLLQVKDRHNGNILLSGEGHL 241
S+ +F + N ++A+ +V+S A Y ++ Y+L V DRH N+LL+ G L
Sbjct: 433 GSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGVGDRHLDNLLLTKTGKL 492
Query: 242 IHIDFGFILSLSPRNLGFETSPFKLTLEVVEVFGGV--DMFCYFKILMLQGLIAARKHMD 299
HIDFG+IL R+ P KL E+VE GG + + F+ + R++ +
Sbjct: 493 FHIDFGYILG---RDPKPLPPPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSN 549
Query: 300 KILSLVEIMRSGSQLPCFKSGAATVQNLKNRFHMNLTEEQLQVLIDKLVDSSIHSL 355
IL+L +M + TV+ ++++F ++L++E+ + L+D S+H+L
Sbjct: 550 LILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYMQSLIDESVHAL 605
>pdb|3IHY|A Chain A, Human Pik3c3 Crystal Structure
pdb|3IHY|B Chain B, Human Pik3c3 Crystal Structure
pdb|3IHY|C Chain C, Human Pik3c3 Crystal Structure
pdb|3IHY|D Chain D, Human Pik3c3 Crystal Structure
pdb|3IHY|E Chain E, Human Pik3c3 Crystal Structure
Length = 600
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 158/356 (44%), Gaps = 36/356 (10%)
Query: 9 LSPQLEFIRVLINMSKTL----ASLRSKEAKTSRLLADLTTLNHNLPARVWLPLYSDQPH 64
L+ Q F+ L+++ K + + + K + LL D +N + + LPL +P
Sbjct: 263 LAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPL---EPQ 319
Query: 65 HIVR-IPPSAAAVLNSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGD 123
+R I P A + S + + E K I K GD
Sbjct: 320 VKIRGIIPETATLFKSALMPAQLFFKTEDGGK-------------------YPVIFKHGD 360
Query: 124 DXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKNSQ 183
D K+ E + L L PYK+L S G ++ + +V + ++ +++
Sbjct: 361 DLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQ-FIQSVPVAEVL-DTE 418
Query: 184 VSLLEYFIQEFGDINSEGFLAAQ--KNFVQSTAAYSLVCYLLQVKDRHNGNILLSGEGHL 241
S+ +F + N ++A+ +V+S A Y ++ Y+L V DRH N+LL+ G L
Sbjct: 419 GSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGVGDRHLDNLLLTKTGKL 478
Query: 242 IHIDFGFILSLSPRNLGFETSPFKLTLEVVEVFGGV--DMFCYFKILMLQGLIAARKHMD 299
HIDFG+IL R+ P KL E+VE GG + + F+ + R++ +
Sbjct: 479 FHIDFGYILG---RDPKPLPPPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSN 535
Query: 300 KILSLVEIMRSGSQLPCFKSGAATVQNLKNRFHMNLTEEQLQVLIDKLVDSSIHSL 355
IL+L +M + TV+ ++++F ++L++E+ + L+D S+H+L
Sbjct: 536 LILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYMQSLIDESVHAL 591
>pdb|1E8X|A Chain A, Structural Insights Into Phoshoinositide 3-Kinase
Enzymatic Mechanism And Signalling
pdb|1E90|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E7V|A Chain A, Structure Determinants Of Phosphoinositide 3-kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E8W|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
Length = 961
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 115 MAAIVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVS 174
+ I K GDD IW+ E + L L PY + + G+IE + + +
Sbjct: 687 IGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATT 746
Query: 175 LHQIKKNS-------QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKD 227
+ +I++++ + +L ++++E I E F AA + FV S A Y + ++L + D
Sbjct: 747 IAKIQQSTVGNTGAFKDEVLSHWLKEKCPIE-EKFQAAVERFVYSCAGYCVATFVLGIGD 805
Query: 228 RHNGNILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGVDM-----F 280
RHN NI++S G+L HIDFG IL LG E PF LT + + V G F
Sbjct: 806 RHNDNIMISETGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSLHF 865
Query: 281 CYFKILMLQGLIAARKHMDKILSLVEIM 308
F+ + ++ +A R H + ++ L +M
Sbjct: 866 QKFQDVCVKAYLALRHHTNLLIILFSMM 893
>pdb|1E7U|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
Length = 961
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 115 MAAIVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVS 174
+ I K GDD IW+ E + L L PY + + G+IE + + +
Sbjct: 687 IGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATT 746
Query: 175 LHQIKKNS-------QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKD 227
+ +I++++ + +L ++++E I E F AA + FV S A Y + ++L + D
Sbjct: 747 IAKIQQSTVGNTGAFKDEVLSHWLKEKCPIE-EKFQAAVERFVYSCAGYCVATFVLGIGD 805
Query: 228 RHNGNILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGVDM-----F 280
RHN NI++S G+L HIDFG IL LG E PF LT + + V G F
Sbjct: 806 RHNDNIMISETGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSLHF 865
Query: 281 CYFKILMLQGLIAARKHMDKILSLVEIM 308
F+ + ++ +A R H + ++ L +M
Sbjct: 866 QKFQDVCVKAYLALRHHTNLLIILFSMM 893
>pdb|3NZS|A Chain A, Structure-Based Optimization Of Pyrazolo -Pyrimidine And
-Pyridine Inhibitors Of Pi3-Kinase
pdb|3NZU|A Chain A, Structure-Based Optimization Of Pyrazolo -Pyrimidine And
-Pyridine Inhibitors Of Pi3-Kinase
Length = 954
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 115 MAAIVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVS 174
+ I K GDD IW+ E + L L PY + + G+IE + + +
Sbjct: 682 IGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATT 741
Query: 175 LHQIKKNS-------QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKD 227
+ +I++++ + +L ++++E E F AA + FV S A Y + ++L + D
Sbjct: 742 IAKIQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGD 800
Query: 228 RHNGNILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGVDM-----F 280
RHN NI+++ G+L HIDFG IL LG E PF LT + + V G F
Sbjct: 801 RHNDNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHF 860
Query: 281 CYFKILMLQGLIAARKHMDKILSLVEIM 308
F+ + ++ +A R H + ++ L +M
Sbjct: 861 QKFQDICVKAYLALRHHTNLLIILFSMM 888
>pdb|1E8Y|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E8Z|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|2A4Z|A Chain A, Crystal Structure Of Human Pi3kgamma Complexed With
As604850
pdb|2A5U|A Chain A, Crystal Structure Of Human Pi3kgamma Complexed With
As605240
pdb|2CHW|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role
For P110 Alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-39
pdb|2CHX|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role
For P110alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-90
pdb|2CHZ|A Chain A, A Pharmacological Map Of The Pi3-K Family Defines A Role
For P110alpha In Signaling: The Structure Of Complex Of
Phosphoinositide 3-Kinase Gamma With Inhibitor Pik-93
pdb|3DPD|A Chain A, Achieving Multi-Isoform Pi3k Inhibition In A Series Of
Substituted 3,4-Dihydro-2h-Benzo[1,4]oxazines
pdb|2V4L|A Chain A, Complex Of Human Phosphoinositide 3-kinase Catalytic
Subunit Gamma (p110 Gamma) With Pik-284
pdb|3IBE|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor Bound
To Pi3 Kinase Gamma
pdb|3LJ3|A Chain A, Pi3-Kinase-Gamma With A Pyrrolopyridine-Benzofuran
Inhibitor
pdb|3ML8|A Chain A, Discovery Of The Highly Potent Pi3kMTOR DUAL INHIBITOR
PF-0 Through Structure Based Drug Design
pdb|3ML9|A Chain A, Discovery Of The Highly Potent Pi3kMTOR DUAL INHIBITOR
PF-0 Through Structure Based Drug Design
pdb|3MJW|A Chain A, Pi3 Kinase Gamma With A Benzofuranone Inhibitor
pdb|3P2B|A Chain A, Crystal Structure Of Pi3k Gamma With
3-(2-Morpholino-6-(Pyridin-3-
Ylamino)pyrimidin-4-Yl)phenol
pdb|3SD5|A Chain A, Crystal Structure Of Pi3k Gamma With
5-(2,4-Dimorpholinopyrimidin-6-
Yl)-4-(Trifluoromethyl)pyridin-2-Amine
pdb|3TJP|A Chain A, Crystal Structure Of Pi3k Gamma With
N6-(3,4-Dimethoxyphenyl)-2-
Morpholino-[4,5'-Bipyrimidine]-2',6-Diamine
pdb|4FUL|A Chain A, Pi3 Kinase Gamma Bound To A Pyrmidine Inhibitor
Length = 966
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 115 MAAIVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVS 174
+ I K GDD IW+ E + L L PY + + G+IE + + +
Sbjct: 686 IGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATT 745
Query: 175 LHQIKKNS-------QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKD 227
+ +I++++ + +L ++++E E F AA + FV S A Y + ++L + D
Sbjct: 746 IAKIQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGD 804
Query: 228 RHNGNILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGVDM-----F 280
RHN NI+++ G+L HIDFG IL LG E PF LT + + V G F
Sbjct: 805 RHNDNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHF 864
Query: 281 CYFKILMLQGLIAARKHMDKILSLVEIM 308
F+ + ++ +A R H + ++ L +M
Sbjct: 865 QKFQDICVKAYLALRHHTNLLIILFSMM 892
>pdb|3QAQ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Triazine-Benzimidazole 1
pdb|3QAR|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Triazine-Benzimidazole 32
pdb|3QJZ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Benzothiazole 1
pdb|3QK0|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Benzothiazole 82
pdb|3S2A|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With A
Quinoline Inhibitor
pdb|4FHJ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Imidazopyridine 2
pdb|4F1S|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With A
Pyridyl- Triazine-Sulfonamide Inhibitor
pdb|4FLH|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Amg511
pdb|4FJY|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Quinoline-Indoline Inhibitor 24f
pdb|4FJZ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With
Pyrrolo-Pyridine Inhibitor 63
Length = 960
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 115 MAAIVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVS 174
+ I K GDD IW+ E + L L PY + + G+IE + + +
Sbjct: 686 IGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATT 745
Query: 175 LHQIKKNS-------QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKD 227
+ +I++++ + +L ++++E E F AA + FV S A Y + ++L + D
Sbjct: 746 IAKIQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGD 804
Query: 228 RHNGNILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGVDM-----F 280
RHN NI+++ G+L HIDFG IL LG E PF LT + + V G F
Sbjct: 805 RHNDNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHF 864
Query: 281 CYFKILMLQGLIAARKHMDKILSLVEIM 308
F+ + ++ +A R H + ++ L +M
Sbjct: 865 QKFQDICVKAYLALRHHTNLLIILFSMM 892
>pdb|1HE8|A Chain A, Ras G12v-Pi 3-Kinase Gamma Complex
Length = 965
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 115 MAAIVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVS 174
+ I K GDD IW+ E + L L PY + + G+IE + + +
Sbjct: 685 IGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATT 744
Query: 175 LHQIKKNS-------QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKD 227
+ +I++++ + +L ++++E E F AA + FV S A Y + ++L + D
Sbjct: 745 IAKIQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGD 803
Query: 228 RHNGNILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGVDM-----F 280
RHN NI+++ G+L HIDFG IL LG E PF LT + + V G F
Sbjct: 804 RHNDNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHF 863
Query: 281 CYFKILMLQGLIAARKHMDKILSLVEIM 308
F+ + ++ +A R H + ++ L +M
Sbjct: 864 QKFQDICVKAYLALRHHTNLLIILFSMM 891
>pdb|4DK5|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With A
Pyridyl- Triazine Inhibitor
Length = 959
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 115 MAAIVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVS 174
+ I K GDD IW+ E + L L PY + + G+IE + + +
Sbjct: 685 IGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATT 744
Query: 175 LHQIKKNS-------QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKD 227
+ +I++++ + +L ++++E E F AA + FV S A Y + ++L + D
Sbjct: 745 IAKIQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGD 803
Query: 228 RHNGNILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGVDM-----F 280
RHN NI+++ G+L HIDFG IL LG E PF LT + + V G F
Sbjct: 804 RHNDNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHF 863
Query: 281 CYFKILMLQGLIAARKHMDKILSLVEIM 308
F+ + ++ +A R H + ++ L +M
Sbjct: 864 QKFQDICVKAYLALRHHTNLLIILFSMM 891
>pdb|3DBS|A Chain A, Structure Of Pi3k Gamma In Complex With Gdc0941
pdb|3L13|A Chain A, Crystal Structures Of Pan-Pi3-Kinase And Dual
Pan-Pi3-KinaseMTOR Inhibitors
pdb|4AOF|A Chain A, Selective Small Molecule Inhibitor Discovered By
Chemoproteomic Assay Platform Reveals Regulation Of Th17
Cell Differentiation By Pi3kgamma
Length = 960
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 115 MAAIVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVS 174
+ I K GDD IW+ E + L L PY + + G+IE + + +
Sbjct: 686 IGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATT 745
Query: 175 LHQIKKNS-------QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKD 227
+ +I++++ + +L ++++E E F AA + FV S A Y + ++L + D
Sbjct: 746 IAKIQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGD 804
Query: 228 RHNGNILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGVDM-----F 280
RHN NI+++ G+L HIDFG IL LG E PF LT + + V G F
Sbjct: 805 RHNDNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHF 864
Query: 281 CYFKILMLQGLIAARKHMDKILSLVEIM 308
F+ + ++ +A R H + ++ L +M
Sbjct: 865 QKFQDICVKAYLALRHHTNLLIILFSMM 892
>pdb|3CST|A Chain A, Crystal Structure Of Pi3k P110gamma Catalytical Domain In
Complex With Organoruthenium Inhibitor E5e2
pdb|3CSF|A Chain A, Crystal Structure Of Pi3k P110gamma Catalytical Domain In
Complex With Organoruthenium Inhibitor Dw2
pdb|3L16|A Chain A, Discovery Of (Thienopyrimidin-2-Yl)aminopyrimidines As
Potent, Selective, And Orally Available Pan-Pi3-Kinase
And Dual Pan-Pi3- KinaseMTOR INHIBITORS FOR THE
TREATMENT OF CANCER
pdb|3L17|A Chain A, Discovery Of (Thienopyrimidin-2-Yl)aminopyrimidines As
Potent, Selective, And Orally Available Pan-Pi3-Kinase
And Dual Pan-Pi3- KinaseMTOR INHIBITORS FOR THE
TREATMENT OF CANCER
pdb|3L08|A Chain A, Structure Of Pi3k Gamma With A Potent Inhibitor:
Gsk2126458
pdb|3OAW|A Chain A, 4-Methylpteridineones As Orally Active And Selective
Pi3kMTOR DUAL Inhibitors
pdb|3PRE|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding
Scaffold (Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3PRZ|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding
Scaffold (Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3PS6|A Chain A, Quinazolines With Intra-Molecular Hydrogen Bonding
Scaffold (Imhbs) As Pi3kMTOR DUAL INHIBITORS.
pdb|3R7Q|A Chain A, Structure-Based Design Of Thienobenzoxepin Inhibitors Of
Pi3- Kinase
pdb|3R7R|A Chain A, Structure-Based Design Of Thienobenzoxepin Inhibitors Of
Pi3-Kinase
pdb|3ZVV|A Chain A, Fragment Bound To Pi3kinase Gamma
pdb|3ZW3|A Chain A, Fragment Based Discovery Of A Novel And Selective Pi3
Kinase Inhibitor
pdb|3TL5|A Chain A, Discovery Of Gdc-0980: A Potent, Selective, And Orally
Available Class I Phosphatidylinositol 3-Kinase
(Pi3k)MAMMALIAN TARGET OF RAPAMYCIN (Mtor) Kinase
Inhibitor For The Treatment Of Cancer
pdb|3T8M|A Chain A, Rational Design Of Pi3k-Alpha Inhibitors That Exhibit
Selectivity Over The Pi3k-Beta Isoform
pdb|4GB9|A Chain A, Potent And Highly Selective Benzimidazole Inhibitors Of
Pi3k-Delta
pdb|4G11|A Chain A, X-Ray Structure Of Pi3k-Gamma Bound To A
4-(Morpholin-4-Yl)- (6-Oxo-1,
6-Dihydropyrimidin-2-Yl)amide Inhibitor
pdb|4HLE|A Chain A, Compound 21 (1-alkyl-substituted 1,2,4-triazoles)
Length = 966
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 115 MAAIVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVS 174
+ I K GDD IW+ E + L L PY + + G+IE + + +
Sbjct: 686 IGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATT 745
Query: 175 LHQIKKNS-------QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKD 227
+ +I++++ + +L ++++E E F AA + FV S A Y + ++L + D
Sbjct: 746 IAKIQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGD 804
Query: 228 RHNGNILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGVDM-----F 280
RHN NI+++ G+L HIDFG IL LG E PF LT + + V G F
Sbjct: 805 RHNDNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHF 864
Query: 281 CYFKILMLQGLIAARKHMDKILSLVEIM 308
F+ + ++ +A R H + ++ L +M
Sbjct: 865 QKFQDICVKAYLALRHHTNLLIILFSMM 892
>pdb|3ENE|A Chain A, Complex Of Pi3k Gamma With An Inhibitor
Length = 959
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 115 MAAIVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVS 174
+ I K GDD IW+ E + L L PY + + G+IE + + +
Sbjct: 685 IGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATT 744
Query: 175 LHQIKKNS-------QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKD 227
+ +I++++ + +L ++++E E F AA + FV S A Y + ++L + D
Sbjct: 745 IAKIQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGD 803
Query: 228 RHNGNILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGVDM-----F 280
RHN NI+++ G+L HIDFG IL LG E PF LT + + V G F
Sbjct: 804 RHNDNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHF 863
Query: 281 CYFKILMLQGLIAARKHMDKILSLVEIM 308
F+ + ++ +A R H + ++ L +M
Sbjct: 864 QKFQDICVKAYLALRHHTNLLIILFSMM 891
>pdb|4ANU|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors.
pdb|4ANW|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 115 MAAIVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVS 174
+ I K GDD IW+ E + L L PY + + G+IE + + +
Sbjct: 690 IGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATT 749
Query: 175 LHQIKKNS-------QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKD 227
+ +I++++ + +L ++++E E F AA + FV S A Y + ++L + D
Sbjct: 750 IAKIQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGD 808
Query: 228 RHNGNILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGVDM-----F 280
RHN NI+++ G+L HIDFG IL LG E PF LT + + V G F
Sbjct: 809 RHNDNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHF 868
Query: 281 CYFKILMLQGLIAARKHMDKILSLVEIM 308
F+ + ++ +A R H + ++ L +M
Sbjct: 869 QKFQDICVKAYLALRHHTNLLIILFSMM 896
>pdb|4ANV|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 115 MAAIVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVS 174
+ I K GDD IW+ E + L L PY + + G+IE + + +
Sbjct: 690 IGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATT 749
Query: 175 LHQIKKNS-------QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKD 227
+ +I++++ + +L ++++E E F AA + FV S A Y + ++L + D
Sbjct: 750 IAKIQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGD 808
Query: 228 RHNGNILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGVDM-----F 280
RHN NI+++ G+L HIDFG IL LG E PF LT + + V G F
Sbjct: 809 RHNDNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHF 868
Query: 281 CYFKILMLQGLIAARKHMDKILSLVEIM 308
F+ + ++ +A R H + ++ L +M
Sbjct: 869 QKFQDICVKAYLALRHHTNLLIILFSMM 896
>pdb|3APC|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5132799
pdb|3APD|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5108134
pdb|3APF|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With
Ch5039699
Length = 966
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 115 MAAIVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVS 174
+ I K GDD IW+ E + L L PY + + G+IE + + +
Sbjct: 692 IGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATT 751
Query: 175 LHQIKKNS-------QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKD 227
+ +I++++ + +L ++++E E F AA + FV S A Y + ++L + D
Sbjct: 752 IAKIQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGD 810
Query: 228 RHNGNILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGVDM-----F 280
RHN NI+++ G+L HIDFG IL LG E PF LT + + V G F
Sbjct: 811 RHNDNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHF 870
Query: 281 CYFKILMLQGLIAARKHMDKILSLVEIM 308
F+ + ++ +A R H + ++ L +M
Sbjct: 871 QKFQDICVKAYLALRHHTNLLIILFSMM 898
>pdb|3L54|A Chain A, Structure Of Pi3k Gamma With Inhibitor
Length = 966
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 115 MAAIVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVS 174
+ I K GDD IW+ E + L L PY + + G+IE + + +
Sbjct: 686 IGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATT 745
Query: 175 LHQIKKNS-------QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKD 227
+ +I++++ + +L ++++E E F AA + FV S A Y + ++L + D
Sbjct: 746 IAKIQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGD 804
Query: 228 RHNGNILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGVDM-----F 280
RHN NI+++ G+L HIDFG IL LG E PF LT + + V G F
Sbjct: 805 RHNDNIMITETGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHF 864
Query: 281 CYFKILMLQGLIAARKHMDKILSLVEIM 308
F+ + ++ +A R H + ++ L +M
Sbjct: 865 QKFQDVCVKAYLALRHHTNLLIILFSMM 892
>pdb|2X6F|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With 3-Methyladenine
pdb|2X6F|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With 3-Methyladenine
pdb|2X6H|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34
pdb|2X6H|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34
pdb|2X6I|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-kinase Vps34 In Complex With Pik-90
pdb|2X6I|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-kinase Vps34 In Complex With Pik-90
pdb|2X6J|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pik-93
pdb|2X6J|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pik-93
pdb|2X6K|A Chain A, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pi-103
pdb|2X6K|B Chain B, The Crystal Structure Of The Drosophila Class Iii
Pi3-Kinase Vps34 In Complex With Pi-103
Length = 696
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 9/260 (3%)
Query: 116 AAIVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVSL 175
AAI K GDD K+ E + L L PYK+L S+ G ++ + +
Sbjct: 441 AAIFKHGDDLRQDQLILQMITLMDKLLRRENLDLKLTPYKVLATSSKHGFLQYVDSCTVA 500
Query: 176 HQIKKNSQVSLLEYFIQEFGDINSEGFLAAQ--KNFVQSTAAYSLVCYLLQVKDRHNGNI 233
+ + + +F + N ++A+ +++S A Y ++ YLL V DRH N+
Sbjct: 501 EVLAREGNIH--NFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLGVGDRHLDNL 558
Query: 234 LLSGEGHLIHIDFGFILSLSPRNLGFETSPFKLTLEVVEVFGGV--DMFCYFKILMLQGL 291
LL+ G L HIDFG+IL R+ P KL+ E+VE GG+ + F+
Sbjct: 559 LLTTNGKLFHIDFGYILG---RDPKPMPPPMKLSKEMVEAMGGISSEHHHEFRKQCYTAY 615
Query: 292 IAARKHMDKILSLVEIMRSGSQLPCFKSGAATVQNLKNRFHMNLTEEQLQVLIDKLVDSS 351
+ R+H + +L+L +M + V+ ++ + LT+E+ + L+D S
Sbjct: 616 LHLRRHANVMLNLFSLMVDATVPDIALEPDKAVKKVEENLQLGLTDEEAVQHLQSLLDVS 675
Query: 352 IHSLSTKLYDGFQYYTNAFQ 371
I ++ L + +T ++
Sbjct: 676 ITAVMPALVEQIHRFTQYWR 695
>pdb|3HHM|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex With
Nish2 Of P85alpha And The Drug Wortmannin
Length = 1091
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 18/258 (6%)
Query: 118 IVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVSLHQ 177
I K+GDD IW + + L + PY L + + GLIE + N+ ++ Q
Sbjct: 823 IFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDCVGLIEVVRNSHTIMQ 882
Query: 178 IK-KNSQVSLLEY----FIQEFGDIN-SEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNG 231
I+ K L++ Q D N E + AA F +S A Y + ++L + DRHN
Sbjct: 883 IQCKGGLKGALQFNSHTLHQWLKDKNKGEIYDAAIDLFTRSCAGYCVATFILGIGDRHNS 942
Query: 232 NILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGVDMFC-------Y 282
NI++ +G L HIDFG L + G+ E PF LT + + V C
Sbjct: 943 NIMVKDDGQLFHIDFGHFLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFER 1002
Query: 283 FKILMLQGLIAARKHMDKILSLVEIMRSGSQLPCFKSGAATVQNLKNRFHMNLTE-EQLQ 341
F+ + + +A R+H + ++L +M GS +P +S + ++ ++ TE E L+
Sbjct: 1003 FQEMCYKAYLAIRQHANLFINLFSMM-LGSGMPELQS-FDDIAYIRKTLALDKTEQEALE 1060
Query: 342 VLIDKLVDSSIHSLSTKL 359
+ ++ D+ +TK+
Sbjct: 1061 YFMKQMNDARHGGWTTKM 1078
>pdb|3HIZ|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex With
Nish2 Of P85alpha
Length = 1096
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 18/258 (6%)
Query: 118 IVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVSLHQ 177
I K+GDD IW + + L + PY L + + GLIE + N+ ++ Q
Sbjct: 828 IFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDCVGLIEVVRNSHTIMQ 887
Query: 178 IK-KNSQVSLLEY----FIQEFGDIN-SEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNG 231
I+ K L++ Q D N E + AA F +S A Y + ++L + DRHN
Sbjct: 888 IQCKGGLKGALQFNSHTLHQWLKDKNKGEIYDAAIDLFTRSCAGYCVATFILGIGDRHNS 947
Query: 232 NILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGVDMFC-------Y 282
NI++ +G L HIDFG L + G+ E PF LT + + V C
Sbjct: 948 NIMVKDDGQLFHIDFGHFLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFER 1007
Query: 283 FKILMLQGLIAARKHMDKILSLVEIMRSGSQLPCFKSGAATVQNLKNRFHMNLTE-EQLQ 341
F+ + + +A R+H + ++L +M GS +P +S + ++ ++ TE E L+
Sbjct: 1008 FQEMCYKAYLAIRQHANLFINLFSMM-LGSGMPELQS-FDDIAYIRKTLALDKTEQEALE 1065
Query: 342 VLIDKLVDSSIHSLSTKL 359
+ ++ D+ +TK+
Sbjct: 1066 YFMKQMNDARHGGWTTKM 1083
>pdb|2RD0|A Chain A, Structure Of A Human P110alpha/p85alpha Complex
Length = 1096
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 18/258 (6%)
Query: 118 IVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVSLHQ 177
I K+GDD IW + + L + PY L + + GLIE + N+ ++ Q
Sbjct: 828 IFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDCVGLIEVVRNSHTIMQ 887
Query: 178 IK-KNSQVSLLEY----FIQEFGDIN-SEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNG 231
I+ K L++ Q D N E + AA F +S A Y + ++L + DRHN
Sbjct: 888 IQCKGGLKGALQFNSHTLHQWLKDKNKGEIYDAAIDLFTRSCAGYCVATFILGIGDRHNS 947
Query: 232 NILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGVDMFC-------Y 282
NI++ +G L HIDFG L + G+ E PF LT + + V C
Sbjct: 948 NIMVKDDGQLFHIDFGHFLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFER 1007
Query: 283 FKILMLQGLIAARKHMDKILSLVEIMRSGSQLPCFKSGAATVQNLKNRFHMNLTE-EQLQ 341
F+ + + +A R+H + ++L +M GS +P +S + ++ ++ TE E L+
Sbjct: 1008 FQEMCYKAYLAIRQHANLFINLFSMM-LGSGMPELQS-FDDIAYIRKTLALDKTEQEALE 1065
Query: 342 VLIDKLVDSSIHSLSTKL 359
+ ++ D+ +TK+
Sbjct: 1066 YFMKQMNDAHHGGWTTKM 1083
>pdb|4A55|A Chain A, Crystal Structure Of P110alpha In Complex With Ish2 Of
P85alpha And The Inhibitor Pik-108
Length = 1096
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 18/258 (6%)
Query: 118 IVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVSLHQ 177
I K+GDD IW + + L + PY L + + GLIE + N+ ++ Q
Sbjct: 828 IFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDCVGLIEVVRNSHTIMQ 887
Query: 178 IK-KNSQVSLLEY----FIQEFGDIN-SEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNG 231
I+ K L++ Q D N E + AA F +S A Y + ++L + DRHN
Sbjct: 888 IQCKGGLKGALQFNSHTLHQWLKDKNKGEIYDAAIDLFTRSCAGYCVATFILGIGDRHNS 947
Query: 232 NILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEV-------FGGVDMFCY 282
NI++ +G L HIDFG L + G+ E PF LT + + V + F
Sbjct: 948 NIMVKDDGQLFHIDFGHFLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQEYTKTREFER 1007
Query: 283 FKILMLQGLIAARKHMDKILSLVEIMRSGSQLPCFKSGAATVQNLKNRFHMNLTE-EQLQ 341
F+ + + +A R+H + ++L +M GS +P +S + ++ ++ TE E L+
Sbjct: 1008 FQEMCYKAYLAIRQHANLFINLFSMM-LGSGMPELQS-FDDIAYIRKTLALDKTEQEALE 1065
Query: 342 VLIDKLVDSSIHSLSTKL 359
++ D+ +TK+
Sbjct: 1066 YFTKQMNDAHHGGWTTKM 1083
>pdb|4ANX|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors
Length = 980
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 115 MAAIVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVS 174
+ I K GDD IW+ E + L L PY + + G+IE + + +
Sbjct: 690 IGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATT 749
Query: 175 LHQIKKNS-------QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKD 227
+ +I++++ + +L ++++E E F AA + FV S A Y + ++L + D
Sbjct: 750 IAKIQQSTVGNTGAFKDEVLNHWLKE-KSPTEEKFQAAVERFVYSCAGYCVATFVLGIGD 808
Query: 228 RHNGNILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGVDM-----F 280
RHN NI+++ G+L HIDFG I LG E PF LT + + V G F
Sbjct: 809 RHNDNIMITETGNLFHIDFGHINGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSPHF 868
Query: 281 CYFKILMLQGLIAARKHMDKILSLVEIM 308
F+ + ++ +A R H + ++ L +M
Sbjct: 869 QKFQDICVKAYLALRHHTNLLIILFSMM 896
>pdb|3ZIM|A Chain A, Discovery Of A Potent And Isoform-selective Targeted
Covalent Inhibitor Of The Lipid Kinase Pi3kalpha
Length = 940
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 16/217 (7%)
Query: 118 IVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVSLHQ 177
I K+GDD IW + + L + PY L + + GLIE + N+ ++ Q
Sbjct: 694 IFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDCVGLIEVVRNSHTIMQ 753
Query: 178 IK-KNSQVSLLEY----FIQEFGDIN-SEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNG 231
I+ K L++ Q D N E + AA F +S A Y + ++L + DRHN
Sbjct: 754 IQCKGGLKGALQFNSHTLHQWLKDKNKGEIYDAAIDLFTRSCAGYCVATFILGIGDRHNS 813
Query: 232 NILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGVDMFC-------Y 282
NI++ +G L HIDFG L + G+ E PF LT + + V C
Sbjct: 814 NIMVKDDGQLFHIDFGHFLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFER 873
Query: 283 FKILMLQGLIAARKHMDKILSLVEIMRSGSQLPCFKS 319
F+ + + +A R+H + ++L +M GS +P +S
Sbjct: 874 FQEMCYKAYLAIRQHANLFINLFSMM-LGSGMPELQS 909
>pdb|2Y3A|A Chain A, Crystal Structure Of P110beta In Complex With Icsh2 Of
P85beta And The Drug Gdc-0941
Length = 1092
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 17/260 (6%)
Query: 115 MAAIVKSGDDXXXXXXXXXXXXXXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVS 174
+ I K+GDD +W + L + PY L + SGLIE + + +
Sbjct: 822 VGVIFKNGDDLRQDMLTLQMLRLMDLLWKEAGLDLRMLPYGCLATGDRSGLIEVVSTSET 881
Query: 175 LHQIKKNS-QVSLLEYFIQE-----FGDINSEGFL-AAQKNFVQSTAAYSLVCYLLQVKD 227
+ I+ NS V+ F ++ + NS L A + F S A Y + Y+L + D
Sbjct: 882 IADIQLNSSNVAATAAFNKDALLNWLKEYNSGDDLDRAIEEFTLSCAGYCVASYVLGIGD 941
Query: 228 RHNGNILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVF-----GGVDMF 280
RH+ NI++ G L HIDFG IL G E PF LT + + V G + F
Sbjct: 942 RHSDNIMVKKTGQLFHIDFGHILGNFKSKFGIKRERVPFILTYDFIHVIQQGKTGNTEKF 1001
Query: 281 CYFKILMLQGLIAARKHMDKILSLVEIMRSGSQLPCFKSGAATVQNLKNRFHMNLTEEQ- 339
F+ + R+H + ++L +M + LP S +Q LK+ + +EE+
Sbjct: 1002 GRFRQCCEDAYLILRRHGNLFITLFALMLTAG-LPELTS-VKDIQYLKDSLALGKSEEEA 1059
Query: 340 LQVLIDKLVDSSIHSLSTKL 359
L+ K ++ S +TK+
Sbjct: 1060 LKQFKQKFDEALRESWTTKV 1079
>pdb|4AJW|A Chain A, Discovery And Optimization Of New Benzimidazole- And
Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors
For The Treatment Of Phosphatase And Tensin Homologue
(Pten)-Deficient Cancers
pdb|4AJW|B Chain B, Discovery And Optimization Of New Benzimidazole- And
Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors
For The Treatment Of Phosphatase And Tensin Homologue
(Pten)-Deficient Cancers
Length = 934
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 113/279 (40%), Gaps = 36/279 (12%)
Query: 77 LNSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDXXXXXXXXXXXX 136
++SK K +I+Y E ++ G++ I K+GDD
Sbjct: 642 MDSKMKPLWIMYSSE----------EAGSAGNV------GIIFKNGDDLRQDMLTLQMIQ 685
Query: 137 XXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKNSQVSLLEYFIQEFGD 196
+W E + L + PY L + +GLIE +L++ ++ I+ N +
Sbjct: 686 LMDVLWKQEGLDLRMTPYGCLPTGDRTGLIEVVLHSDTIANIQLNKSNMAATAAFNKDAL 745
Query: 197 IN-------SEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSGEGHLIHIDFGFI 249
+N E A + F S A Y + Y+L + DRH+ NI++ G L HIDFG
Sbjct: 746 LNWLKSKNPGEALDRAIEEFTLSCAGYCVATYVLGIGDRHSDNIMIRESGQLFHIDFGHF 805
Query: 250 LSLSPRNLGF--ETSPFKLTLEVVEVF-----GGVDMFCYFKILMLQGLIAARKHMDKIL 302
L G E PF LT + V V + F F+ + R+H L
Sbjct: 806 LGNFKTKFGINRERVPFILTYDFVHVIQQGKTNNSEKFERFRGYCERAYTILRRHGLLFL 865
Query: 303 SLVEIMRSGS--QLPCFKSGAATVQNLKNRFHMNLTEEQ 339
L +MR+ +L C K +Q LK+ + TEE+
Sbjct: 866 HLFALMRAAGLPELSCSKD----IQYLKDSLALGKTEEE 900
>pdb|2WXF|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Pik-39.
pdb|2WXG|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Sw13.
pdb|2WXH|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Sw14.
pdb|2WXI|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-kinase
P110delta In Complex With Sw30.
pdb|2WXJ|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ink654.
pdb|2WXK|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ink666.
pdb|2WXL|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Zstk474.
pdb|2WXM|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Dl06.
pdb|2WXN|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-kinase
P110delta In Complex With Dl07.
pdb|2WXO|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With As5.
pdb|2WXP|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Gdc-0941.
pdb|2WXQ|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With As15.
pdb|2WXR|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta.
pdb|2X38|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase
P110delta In Complex With Ic87114
Length = 940
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 113/279 (40%), Gaps = 36/279 (12%)
Query: 77 LNSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDXXXXXXXXXXXX 136
++SK K +I+Y E ++ G++ I K+GDD
Sbjct: 648 MDSKMKPLWIMYSSE----------EAGSAGNV------GIIFKNGDDLRQDMLTLQMIQ 691
Query: 137 XXXKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKNSQVSLLEYFIQEFGD 196
+W E + L + PY L + +GLIE +L++ ++ I+ N +
Sbjct: 692 LMDVLWKQEGLDLRMTPYGCLPTGDRTGLIEVVLHSDTIANIQLNKSNMAATAAFNKDAL 751
Query: 197 IN-------SEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSGEGHLIHIDFGFI 249
+N E A + F S A Y + Y+L + DRH+ NI++ G L HIDFG
Sbjct: 752 LNWLKSKNPGEALDRAIEEFTLSCAGYCVATYVLGIGDRHSDNIMIRESGQLFHIDFGHF 811
Query: 250 LSLSPRNLGF--ETSPFKLTLEVVEVF-----GGVDMFCYFKILMLQGLIAARKHMDKIL 302
L G E PF LT + V V + F F+ + R+H L
Sbjct: 812 LGNFKTKFGINRERVPFILTYDFVHVIQQGKTNNSEKFERFRGYCERAYTILRRHGLLFL 871
Query: 303 SLVEIMRSGS--QLPCFKSGAATVQNLKNRFHMNLTEEQ 339
L +MR+ +L C K +Q LK+ + TEE+
Sbjct: 872 HLFALMRAAGLPELSCSKD----IQYLKDSLALGKTEEE 906
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 226 KDRHNGNILLSGEGHLIHIDFGFILSLS----PRNLGFETSPFKLTLEVVEVFG 275
+D GNILL+ EGH DFG L+ RN T PF + EV++ G
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGT-PFWMAPEVIQEIG 201
>pdb|2AE7|A Chain A, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Pentasaccharide
pdb|2AE7|B Chain B, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Pentasaccharide
pdb|2AE7|C Chain C, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Pentasaccharide
pdb|2AEC|A Chain A, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,2-Man-Alpha1,6-Man- Beta-Or
pdb|2AEC|B Chain B, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,2-Man-Alpha1,6-Man- Beta-Or
pdb|2AEC|C Chain C, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,2-Man-Alpha1,6-Man- Beta-Or
pdb|2AES|A Chain A, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,2-Man-Alpha1,3-Man- Beta-Or
pdb|2AES|B Chain B, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,2-Man-Alpha1,3-Man- Beta-Or
pdb|2AES|C Chain C, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,2-Man-Alpha1,3-Man- Beta-Or
pdb|2AGD|A Chain A, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase- I(M340h-B4gal-T1)
In Complex With Glcnac-Beta1,4-Man-Alpha1,3-Man- Beta-Or
pdb|2AGD|B Chain B, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase- I(M340h-B4gal-T1)
In Complex With Glcnac-Beta1,4-Man-Alpha1,3-Man- Beta-Or
pdb|2AGD|C Chain C, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase- I(M340h-B4gal-T1)
In Complex With Glcnac-Beta1,4-Man-Alpha1,3-Man- Beta-Or
pdb|2AH9|A Chain A, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Chitotriose
pdb|2AH9|B Chain B, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Chitotriose
pdb|2AH9|C Chain C, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Chitotriose
pdb|2FY7|A Chain A, Crystal Structure Of The Catalytic Domain Of The Human
Beta1,4-galactosyltransferase Mutant M339h In Apo Form
pdb|2FYA|A Chain A, Crystal Structure Of The Catalytic Domain Of The Human
Beta1, 4-Galactosyltransferase Mutant M339h Complex With
Manganese
pdb|2FYB|A Chain A, Crystal Structure Of The Catalytic Domain Of The Human
Beta1,4-Galactosyltransferase Mutant M339h In Complex
With Mn And Udp-Galactose In Open Conformation
pdb|3EE5|A Chain A, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,3-Gal-Beta-
Naphthalenemethanol
pdb|3EE5|B Chain B, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,3-Gal-Beta-
Naphthalenemethanol
pdb|3EE5|C Chain C, Crystal Structure Of Human
M340h-Beta1,4-Galactosyltransferase-I (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,3-Gal-Beta-
Naphthalenemethanol
pdb|4EE3|A Chain A, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Pentasaccharide
pdb|4EE3|B Chain B, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Pentasaccharide
pdb|4EE3|C Chain C, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Pentasaccharide
pdb|4EE4|A Chain A, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Tetrasaccharide From Lacto-N- Neohexose
pdb|4EE4|B Chain B, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Tetrasaccharide From Lacto-N- Neohexose
pdb|4EE4|C Chain C, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Tetrasaccharide From Lacto-N- Neohexose
pdb|4EE5|A Chain A, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Trisaccharide From Lacto-N- Neotetraose
pdb|4EE5|B Chain B, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Trisaccharide From Lacto-N- Neotetraose
pdb|4EE5|C Chain C, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Trisaccharide From Lacto-N- Neotetraose
pdb|4EEA|A Chain A, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Gal-Beta1,4-Glc-Beta
pdb|4EEA|B Chain B, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Gal-Beta1,4-Glc-Beta
pdb|4EEA|C Chain C, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Gal-Beta1,4-Glc-Beta
pdb|4EEG|A Chain A, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Gal-Beta
pdb|4EEG|B Chain B, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Gal-Beta
pdb|4EEG|C Chain C, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Gal-Beta
pdb|4EEM|A Chain A, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Man-Alpha-Methyl
pdb|4EEM|B Chain B, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Man-Alpha-Methyl
pdb|4EEM|C Chain C, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Man-Alpha-Methyl
pdb|4EEO|A Chain A, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Glcnac-Alpha-Benzyl
pdb|4EEO|B Chain B, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Glcnac-Alpha-Benzyl
pdb|4EEO|C Chain C, Crystal Structure Of Human
M340h-Beta-1,4-Galactosyltransferase-1 (M340h-B4gal-T1)
In Complex With Glcnac-Beta1,6-Glcnac-Alpha-Benzyl
Length = 287
Score = 28.1 bits (61), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 41/117 (35%), Gaps = 11/117 (9%)
Query: 175 LHQIKKNSQVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNIL 234
LH + + Q+ Y I + GD F ++ Y C++ D L
Sbjct: 87 LHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYDYTCFVFSDVD------L 140
Query: 235 LSGEGHLIHIDFGFILSLSPRNLGFETSPFKLTLEVVEVFGGVDMFCYFKILMLQGL 291
+ H + F PR++ F +L V+ FGGV + L + G
Sbjct: 141 IPMNDHNAYRCFS-----QPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTINGF 192
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,331,076
Number of Sequences: 62578
Number of extensions: 421521
Number of successful extensions: 1270
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1190
Number of HSP's gapped (non-prelim): 60
length of query: 424
length of database: 14,973,337
effective HSP length: 101
effective length of query: 323
effective length of database: 8,652,959
effective search space: 2794905757
effective search space used: 2794905757
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)