Query psy8358
Match_columns 424
No_of_seqs 296 out of 1409
Neff 7.1
Searched_HMMs 46136
Date Fri Aug 16 16:38:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8358.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8358hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd00895 PI3Kc_C2_beta Phosphoi 100.0 1E-87 2.3E-92 666.3 37.0 337 7-367 2-353 (354)
2 cd00891 PI3Kc Phosphoinositide 100.0 2.2E-86 4.7E-91 663.1 36.9 338 7-367 2-351 (352)
3 cd05167 PI4Kc_III_alpha Phosph 100.0 1.5E-86 3.2E-91 651.6 32.2 306 55-371 1-311 (311)
4 cd05176 PI3Kc_C2_alpha Phospho 100.0 5.1E-86 1.1E-90 654.0 35.5 337 7-367 2-352 (353)
5 cd05177 PI3Kc_C2_gamma Phospho 100.0 8E-86 1.7E-90 655.3 35.9 336 7-366 2-352 (354)
6 cd00894 PI3Kc_IB_gamma Phospho 100.0 1.3E-85 2.8E-90 654.6 36.6 340 7-366 2-362 (365)
7 cd05165 PI3Kc_I Phosphoinositi 100.0 2.6E-85 5.6E-90 654.2 35.7 339 7-365 2-363 (366)
8 cd05166 PI3Kc_II Phosphoinosit 100.0 1.1E-84 2.4E-89 649.7 37.1 337 7-367 2-352 (353)
9 cd05173 PI3Kc_IA_beta Phosphoi 100.0 6.1E-84 1.3E-88 643.5 36.2 336 7-366 2-359 (362)
10 cd05174 PI3Kc_IA_delta Phospho 100.0 2.5E-83 5.4E-88 637.3 35.8 336 7-366 2-359 (361)
11 cd05175 PI3Kc_IA_alpha Phospho 100.0 1.5E-83 3.3E-88 637.4 34.0 338 7-364 2-362 (366)
12 cd05168 PI4Kc_III_beta Phospho 100.0 5.1E-84 1.1E-88 630.2 30.0 283 87-370 5-292 (293)
13 cd00896 PI3Kc_III Phosphoinosi 100.0 5.2E-83 1.1E-87 637.7 35.6 335 7-368 2-348 (350)
14 cd00893 PI4Kc_III Phosphoinosi 100.0 3.6E-82 7.7E-87 616.1 29.5 278 91-371 4-289 (289)
15 KOG0902|consensus 100.0 1.9E-77 4.2E-82 646.1 30.8 351 6-372 1445-1803(1803)
16 KOG0903|consensus 100.0 5.4E-76 1.2E-80 608.1 27.9 287 84-370 557-846 (847)
17 KOG0904|consensus 100.0 2.3E-74 5E-79 601.3 20.4 337 2-360 710-1069(1076)
18 KOG0905|consensus 100.0 8E-71 1.7E-75 585.4 24.2 360 2-399 987-1365(1639)
19 KOG0906|consensus 100.0 9.2E-69 2E-73 545.5 27.4 334 7-367 496-839 (843)
20 cd05172 PIKKc_DNA-PK DNA-depen 100.0 5.1E-63 1.1E-67 471.2 24.3 227 67-317 2-234 (235)
21 cd00892 PIKKc_ATR ATR (Ataxia 100.0 8.8E-63 1.9E-67 470.4 25.0 228 68-317 3-236 (237)
22 cd05169 PIKKc_TOR TOR (Target 100.0 5.9E-61 1.3E-65 469.6 23.2 229 67-317 2-279 (280)
23 cd00142 PI3Kc_like Phosphoinos 100.0 3.5E-60 7.5E-65 448.4 24.7 214 70-311 4-219 (219)
24 cd05171 PIKKc_ATM Ataxia telan 100.0 3.5E-60 7.6E-65 463.1 24.6 227 68-316 3-277 (279)
25 cd05164 PIKKc Phosphoinositide 100.0 5.4E-60 1.2E-64 447.2 24.1 215 68-311 3-222 (222)
26 KOG0890|consensus 100.0 3.2E-59 6.9E-64 526.8 22.2 291 66-419 2043-2381(2382)
27 cd05170 PIKKc_SMG1 Suppressor 100.0 2.7E-58 5.9E-63 455.0 24.9 229 68-316 3-305 (307)
28 smart00146 PI3Kc Phosphoinosit 100.0 1.9E-58 4E-63 431.5 22.1 193 116-318 1-198 (202)
29 COG5032 TEL1 Phosphatidylinosi 100.0 1.4E-57 3.1E-62 535.5 27.0 290 62-372 1763-2101(2105)
30 KOG0892|consensus 100.0 8.6E-56 1.9E-60 501.2 23.4 328 50-420 2423-2806(2806)
31 cd05163 TRRAP TRansformation/t 100.0 3.4E-53 7.5E-58 407.8 24.3 229 68-317 3-252 (253)
32 PF00454 PI3_PI4_kinase: Phosp 100.0 5.2E-53 1.1E-57 403.0 19.4 200 114-316 1-233 (235)
33 PTZ00303 phosphatidylinositol 100.0 2.2E-42 4.7E-47 356.4 21.5 288 48-353 932-1325(1374)
34 KOG0891|consensus 100.0 3.3E-36 7.1E-41 349.2 6.1 246 54-318 1944-2237(2341)
35 KOG0889|consensus 99.6 4.3E-15 9.2E-20 174.9 18.4 207 110-318 3219-3482(3550)
36 KOG0903|consensus 99.3 9.9E-13 2.2E-17 138.5 3.9 59 362-424 789-847 (847)
37 KOG0902|consensus 98.7 1.5E-08 3.2E-13 113.1 4.7 158 212-424 1638-1802(1803)
38 cd05167 PI4Kc_III_alpha Phosph 98.5 6.3E-08 1.4E-12 96.0 2.6 50 375-424 262-311 (311)
39 cd00893 PI4Kc_III Phosphoinosi 98.5 7.7E-08 1.7E-12 94.6 2.5 50 375-424 240-289 (289)
40 cd05168 PI4Kc_III_beta Phospho 98.4 7.9E-08 1.7E-12 94.7 2.5 51 374-424 243-293 (293)
41 PF02260 FATC: FATC domain; I 97.4 5.9E-05 1.3E-09 49.7 0.9 28 389-419 5-32 (33)
42 cd00896 PI3Kc_III Phosphoinosi 96.3 0.0019 4E-08 65.5 1.9 48 374-421 301-348 (350)
43 PF13575 DUF4135: Domain of un 95.4 0.2 4.4E-06 51.1 12.4 136 65-253 44-179 (370)
44 cd00891 PI3Kc Phosphoinositide 95.3 0.011 2.3E-07 60.1 2.7 46 375-420 306-351 (352)
45 cd05176 PI3Kc_C2_alpha Phospho 95.0 0.02 4.4E-07 57.9 3.6 46 375-420 307-352 (353)
46 cd00895 PI3Kc_C2_beta Phosphoi 95.0 0.014 3E-07 59.1 2.3 46 375-420 308-353 (354)
47 cd05166 PI3Kc_II Phosphoinosit 93.0 0.062 1.3E-06 54.6 2.5 42 375-416 307-348 (353)
48 TIGR03843 conserved hypothetic 92.8 0.16 3.5E-06 48.5 4.7 115 140-257 59-179 (253)
49 cd00894 PI3Kc_IB_gamma Phospho 92.4 0.097 2.1E-06 53.3 3.0 48 375-422 318-365 (365)
50 cd05175 PI3Kc_IA_alpha Phospho 92.4 0.22 4.8E-06 50.7 5.5 43 375-418 319-362 (366)
51 cd05177 PI3Kc_C2_gamma Phospho 90.7 0.22 4.8E-06 50.6 3.4 41 375-415 308-348 (354)
52 KOG0608|consensus 89.1 0.79 1.7E-05 49.6 6.1 40 212-251 739-778 (1034)
53 cd05165 PI3Kc_I Phosphoinositi 88.2 0.39 8.5E-06 49.0 3.1 44 375-419 319-363 (366)
54 cd04792 LanM-like LanM-like pr 87.7 2.7 5.8E-05 47.5 9.7 106 116-254 115-220 (825)
55 COG0661 AarF Predicted unusual 87.5 0.38 8.2E-06 51.4 2.6 79 148-252 225-315 (517)
56 cd05173 PI3Kc_IA_beta Phosphoi 86.6 0.59 1.3E-05 47.7 3.3 38 375-412 314-352 (362)
57 KOG0616|consensus 85.7 0.52 1.1E-05 46.6 2.2 60 216-275 154-217 (355)
58 cd05174 PI3Kc_IA_delta Phospho 82.3 1.2 2.7E-05 45.3 3.4 38 375-412 314-352 (361)
59 PRK04750 ubiB putative ubiquin 81.6 0.87 1.9E-05 49.0 2.1 28 226-253 284-315 (537)
60 PF06293 Kdo: Lipopolysacchari 81.3 6.4 0.00014 36.5 7.7 100 130-250 57-169 (206)
61 PF06702 DUF1193: Protein of u 79.4 9.5 0.00021 36.2 7.9 106 211-331 90-198 (221)
62 PRK10359 lipopolysaccharide co 79.0 1.3 2.9E-05 42.3 2.3 23 226-249 159-181 (232)
63 TIGR03724 arch_bud32 Kae1-asso 79.0 3.6 7.8E-05 37.3 5.1 28 221-249 107-136 (199)
64 cd05145 RIO1_like RIO kinase f 78.3 1.6 3.5E-05 39.8 2.5 26 226-252 142-167 (190)
65 TIGR01982 UbiB 2-polyprenylphe 78.2 1.6 3.5E-05 45.7 2.8 24 226-249 281-304 (437)
66 cd05151 ChoK Choline Kinase (C 78.2 1.9 4.2E-05 37.7 2.9 27 224-251 110-136 (170)
67 cd05147 RIO1_euk RIO kinase fa 76.8 1.6 3.5E-05 40.1 2.0 27 224-251 138-166 (190)
68 PRK14879 serine/threonine prot 74.5 7.1 0.00015 35.6 5.8 23 226-249 119-141 (211)
69 cd05144 RIO2_C RIO kinase fami 72.5 3.8 8.3E-05 37.4 3.4 29 226-254 149-177 (198)
70 PRK15123 lipopolysaccharide co 70.3 13 0.00028 36.3 6.7 71 165-249 113-192 (268)
71 cd05042 PTKc_Aatyk Catalytic d 66.9 12 0.00026 35.2 5.6 26 226-251 124-149 (269)
72 cd05119 RIO RIO kinase family, 64.3 5.4 0.00012 35.6 2.6 27 225-252 138-164 (187)
73 cd05603 STKc_SGK2 Catalytic do 64.2 85 0.0018 30.5 11.3 25 226-250 120-144 (321)
74 TIGR02172 Fb_sc_TIGR02172 Fibr 62.8 5.6 0.00012 37.7 2.5 24 225-249 157-180 (226)
75 PRK12274 serine/threonine prot 62.7 6.4 0.00014 37.3 2.8 30 221-250 108-140 (218)
76 PRK10271 thiK thiamine kinase; 62.4 7.2 0.00016 36.1 3.0 52 201-254 58-109 (188)
77 PRK01723 3-deoxy-D-manno-octul 62.2 6.4 0.00014 37.5 2.8 26 226-251 166-191 (239)
78 cd05156 ChoK_euk Choline Kinas 60.6 7 0.00015 38.2 2.8 36 219-254 177-216 (302)
79 KOG0598|consensus 60.0 4.6 0.0001 40.9 1.4 25 226-250 149-173 (357)
80 KOG0612|consensus 59.6 9.1 0.0002 44.3 3.7 56 226-281 199-259 (1317)
81 cd05153 HomoserineK_II Homoser 59.6 21 0.00045 34.6 6.0 28 223-250 177-204 (296)
82 PF06176 WaaY: Lipopolysacchar 59.4 8.4 0.00018 36.8 2.9 23 226-249 159-181 (229)
83 PF01636 APH: Phosphotransfera 59.3 6 0.00013 36.1 2.0 31 220-250 165-196 (239)
84 PHA00451 protein kinase 55.7 46 0.00099 32.8 7.2 56 186-245 155-212 (362)
85 cd05069 PTKc_Yes Catalytic dom 54.8 1.7E+02 0.0036 27.2 11.2 25 226-250 126-150 (260)
86 cd06613 STKc_MAP4K3_like Catal 54.7 25 0.00054 32.6 5.4 27 225-251 124-150 (262)
87 cd05590 STKc_nPKC_eta Catalyti 54.4 1.6E+02 0.0034 28.7 11.3 25 226-250 120-144 (320)
88 cd05059 PTKc_Tec_like Catalyti 54.2 33 0.00071 32.0 6.2 25 226-250 124-148 (256)
89 cd08217 STKc_Nek2 Catalytic do 52.7 27 0.00058 32.3 5.2 30 225-254 133-162 (265)
90 cd05601 STKc_CRIK Catalytic do 52.7 38 0.00081 33.2 6.5 25 226-250 126-150 (330)
91 smart00090 RIO RIO-like kinase 52.0 12 0.00026 35.7 2.7 26 226-252 173-198 (237)
92 cd05154 ACAD10_11_like Acyl-Co 51.7 12 0.00026 34.0 2.6 30 221-250 174-205 (223)
93 cd05120 APH_ChoK_like Aminogly 49.9 17 0.00036 30.2 3.1 26 226-251 113-138 (155)
94 TIGR00938 thrB_alt homoserine 49.8 14 0.0003 36.4 2.9 27 223-249 189-215 (307)
95 cd05597 STKc_DMPK_like Catalyt 49.7 44 0.00095 32.9 6.5 49 226-274 126-178 (331)
96 cd05155 APH_ChoK_like_1 Unchar 49.5 15 0.00032 34.6 2.9 30 220-249 163-192 (235)
97 cd05068 PTKc_Frk_like Catalyti 49.4 47 0.001 30.9 6.4 27 226-252 127-153 (261)
98 KOG0667|consensus 47.4 1E+02 0.0023 33.5 9.1 121 118-254 218-343 (586)
99 PRK05231 homoserine kinase; Pr 47.2 16 0.00034 36.0 2.8 25 225-249 191-215 (319)
100 cd05088 PTKc_Tie2 Catalytic do 47.1 2.1E+02 0.0045 27.5 10.8 26 226-251 148-173 (303)
101 cd06637 STKc_TNIK Catalytic do 46.9 47 0.001 31.1 6.0 26 226-251 135-160 (272)
102 cd05602 STKc_SGK1 Catalytic do 46.7 2.3E+02 0.005 27.5 11.1 25 226-250 120-144 (325)
103 cd05111 PTK_HER3 Pseudokinase 45.8 2.6E+02 0.0057 26.3 11.7 25 226-250 133-157 (279)
104 cd05626 STKc_LATS2 Catalytic d 45.5 2.4E+02 0.0052 28.2 11.3 24 226-249 125-148 (381)
105 cd05157 ETNK_euk Ethanolamine 45.5 20 0.00043 33.4 3.1 34 221-254 170-204 (235)
106 PF00069 Pkinase: Protein kina 45.4 18 0.00039 33.5 2.9 48 225-272 121-171 (260)
107 PTZ00426 cAMP-dependent protei 45.2 18 0.00038 36.1 2.9 26 226-251 155-180 (340)
108 PRK11768 serine/threonine prot 44.6 48 0.001 33.0 5.9 30 219-250 194-223 (325)
109 PF01163 RIO1: RIO1 family; I 44.5 21 0.00045 33.0 3.0 84 151-253 70-157 (188)
110 cd05122 PKc_STE Catalytic doma 44.5 2.4E+02 0.0051 25.4 14.0 52 223-274 119-172 (253)
111 cd05098 PTKc_FGFR1 Catalytic d 44.3 2.1E+02 0.0045 27.5 10.3 25 226-250 164-188 (307)
112 cd05627 STKc_NDR2 Catalytic do 44.2 12 0.00027 37.3 1.6 25 226-250 125-149 (360)
113 KOG0603|consensus 44.1 15 0.00033 39.8 2.3 31 225-255 438-469 (612)
114 KOG0906|consensus 44.1 12 0.00027 40.7 1.6 40 375-414 794-833 (843)
115 cd05587 STKc_cPKC Catalytic do 43.9 13 0.00028 36.5 1.6 25 226-250 125-149 (324)
116 cd05039 PTKc_Csk_like Catalyti 43.7 75 0.0016 29.4 6.8 27 226-252 126-152 (256)
117 cd05066 PTKc_EphR_A Catalytic 43.7 56 0.0012 30.6 6.0 27 225-251 129-155 (267)
118 cd05083 PTKc_Chk Catalytic dom 43.7 68 0.0015 29.7 6.5 27 226-252 124-150 (254)
119 cd05581 STKc_PDK1 Catalytic do 43.5 11 0.00024 35.3 1.1 30 225-254 125-154 (280)
120 cd05084 PTKc_Fes Catalytic dom 43.3 69 0.0015 29.6 6.5 26 226-251 118-143 (252)
121 cd05100 PTKc_FGFR3 Catalytic d 43.1 3.2E+02 0.007 26.5 11.6 26 226-251 158-183 (334)
122 cd05624 STKc_MRCK_beta Catalyt 43.0 67 0.0014 31.6 6.6 49 226-274 126-178 (331)
123 COG5032 TEL1 Phosphatidylinosi 42.4 6 0.00013 49.4 -1.2 41 376-419 2052-2104(2105)
124 PTZ00267 NIMA-related protein 42.3 52 0.0011 34.6 6.0 26 226-251 193-218 (478)
125 cd05580 STKc_PKA Catalytic dom 41.9 28 0.00061 33.3 3.6 47 225-271 124-170 (290)
126 KOG1235|consensus 41.2 21 0.00045 38.5 2.8 29 226-254 325-357 (538)
127 PF07804 HipA_C: HipA-like C-t 41.0 24 0.00052 27.4 2.5 30 208-237 38-67 (79)
128 PRK09605 bifunctional UGMP fam 40.8 1.2E+02 0.0027 32.3 8.7 25 225-250 451-475 (535)
129 cd06614 STKc_PAK Catalytic dom 40.3 80 0.0017 29.9 6.5 29 223-251 135-165 (286)
130 PF01633 Choline_kinase: Choli 40.2 18 0.00038 33.4 1.8 29 221-249 143-172 (211)
131 cd05623 STKc_MRCK_alpha Cataly 40.0 76 0.0016 31.1 6.5 49 226-274 126-178 (332)
132 PF10707 YrbL-PhoP_reg: PhoP r 40.0 90 0.002 29.1 6.5 104 123-246 56-166 (199)
133 cd05612 STKc_PRKX_like Catalyt 39.7 28 0.0006 33.5 3.2 27 226-252 125-151 (291)
134 KOG0696|consensus 39.7 18 0.0004 37.7 1.9 27 226-252 474-500 (683)
135 cd05033 PTKc_EphR Catalytic do 39.5 59 0.0013 30.4 5.4 27 226-252 130-156 (266)
136 PTZ00263 protein kinase A cata 39.3 25 0.00054 34.6 2.9 47 225-271 141-187 (329)
137 cd05087 PTKc_Aatyk1_Aatyk3 Cat 39.3 69 0.0015 30.0 5.9 25 226-250 124-148 (269)
138 cd05598 STKc_LATS Catalytic do 38.9 17 0.00038 36.4 1.7 24 226-249 125-148 (376)
139 KOG0984|consensus 38.8 22 0.00048 33.9 2.2 23 226-248 173-195 (282)
140 cd05101 PTKc_FGFR2 Catalytic d 38.6 3.5E+02 0.0077 25.7 11.4 26 226-251 161-186 (304)
141 cd05609 STKc_MAST Catalytic do 38.6 20 0.00043 34.7 2.0 25 225-249 124-148 (305)
142 cd05152 MPH2' Macrolide 2'-Pho 38.5 24 0.00052 34.4 2.6 32 223-254 187-219 (276)
143 KOG0694|consensus 38.4 21 0.00044 39.2 2.2 107 122-249 403-515 (694)
144 cd06617 PKc_MKK3_6 Catalytic d 38.1 72 0.0016 30.0 5.8 25 226-250 128-152 (283)
145 cd06640 STKc_MST4 Catalytic do 38.0 20 0.00044 33.9 2.0 28 225-252 124-151 (277)
146 PRK10345 hypothetical protein; 37.8 1.2E+02 0.0025 28.4 7.0 22 225-246 128-153 (210)
147 cd05086 PTKc_Aatyk2 Catalytic 37.7 97 0.0021 29.1 6.6 25 226-250 123-147 (268)
148 cd05594 STKc_PKB_alpha Catalyt 37.6 25 0.00054 34.5 2.6 25 226-250 120-144 (325)
149 cd05109 PTKc_HER2 Catalytic do 37.6 90 0.002 29.4 6.4 25 226-250 133-157 (279)
150 cd06657 STKc_PAK4 Catalytic do 37.6 45 0.00098 32.1 4.3 27 225-251 139-165 (292)
151 cd05616 STKc_cPKC_beta Catalyt 37.3 17 0.00036 35.7 1.3 26 226-251 125-150 (323)
152 TIGR02906 spore_CotS spore coa 37.3 27 0.00059 33.9 2.8 29 220-249 186-214 (313)
153 TIGR02721 ycfN_thiK thiamine k 37.1 28 0.0006 33.1 2.7 32 222-254 147-178 (256)
154 cd05585 STKc_YPK1_like Catalyt 37.0 20 0.00043 35.0 1.7 25 226-250 117-141 (312)
155 cd08530 STKc_CNK2-like Catalyt 36.8 1.9E+02 0.0042 26.3 8.4 47 225-271 126-173 (256)
156 cd05071 PTKc_Src Catalytic dom 36.8 1.1E+02 0.0023 28.6 6.7 25 226-250 126-150 (262)
157 cd05600 STKc_Sid2p_Dbf2p Catal 36.8 34 0.00074 33.6 3.4 27 226-252 125-151 (333)
158 KOG0592|consensus 36.6 22 0.00048 38.1 2.1 33 218-250 186-222 (604)
159 cd07839 STKc_CDK5 Catalytic do 36.6 77 0.0017 29.8 5.7 25 226-250 123-147 (284)
160 cd05108 PTKc_EGFR Catalytic do 36.5 3.9E+02 0.0086 25.6 11.7 26 226-251 133-158 (316)
161 cd05614 STKc_MSK2_N N-terminal 36.1 20 0.00043 35.2 1.6 25 226-250 129-153 (332)
162 KOG0173|consensus 36.0 32 0.0007 33.2 2.8 44 361-405 157-200 (271)
163 cd07862 STKc_CDK6 Catalytic do 35.9 18 0.00039 34.4 1.2 25 226-250 134-158 (290)
164 cd05575 STKc_SGK Catalytic dom 35.9 20 0.00042 35.2 1.5 25 226-250 120-144 (323)
165 KOG0611|consensus 35.6 48 0.001 34.7 4.1 87 183-274 137-227 (668)
166 cd06638 STKc_myosinIIIA Cataly 35.6 60 0.0013 30.6 4.8 27 226-252 148-174 (286)
167 KOG0593|consensus 35.1 22 0.00049 35.6 1.7 28 226-253 125-152 (396)
168 cd05150 APH Aminoglycoside 3'- 34.9 33 0.00072 32.2 2.8 25 225-249 167-191 (244)
169 cd05070 PTKc_Fyn_Yrk Catalytic 34.9 3.6E+02 0.0079 24.8 11.4 26 226-251 126-151 (260)
170 cd05604 STKc_SGK3 Catalytic do 34.6 22 0.00047 34.9 1.6 25 226-250 120-144 (325)
171 cd05592 STKc_nPKC_theta_delta 34.6 20 0.00043 35.1 1.3 25 226-250 120-144 (316)
172 cd05588 STKc_aPKC Catalytic do 34.5 52 0.0011 32.3 4.3 25 226-250 120-144 (329)
173 cd07878 STKc_p38beta_MAPK11 Ca 34.4 37 0.00081 33.4 3.2 28 226-253 142-169 (343)
174 KOG0610|consensus 34.3 29 0.00064 36.0 2.4 31 222-252 197-229 (459)
175 PLN02421 phosphotransferase, a 34.3 34 0.00074 34.2 2.9 35 221-255 182-217 (330)
176 TIGR01767 MTRK 5-methylthiorib 34.2 26 0.00056 36.0 2.0 29 223-252 194-222 (370)
177 COG0510 ycfN Thiamine kinase a 34.2 33 0.00072 33.5 2.8 34 221-254 153-186 (269)
178 cd06656 STKc_PAK3 Catalytic do 34.1 65 0.0014 31.0 4.8 47 226-272 139-188 (297)
179 cd05591 STKc_nPKC_epsilon Cata 34.0 23 0.00049 34.7 1.6 25 226-250 120-144 (321)
180 COG3642 Mn2+-dependent serine/ 33.8 36 0.00078 31.8 2.7 24 226-250 116-139 (204)
181 cd05112 PTKc_Itk Catalytic dom 33.8 80 0.0017 29.1 5.3 27 226-252 124-150 (256)
182 KOG0690|consensus 33.7 21 0.00045 36.2 1.2 50 202-252 265-318 (516)
183 KOG0594|consensus 33.4 28 0.00061 35.0 2.1 48 206-253 122-171 (323)
184 cd05571 STKc_PKB Catalytic dom 33.1 25 0.00053 34.5 1.7 25 226-250 119-143 (323)
185 PHA03212 serine/threonine kina 33.1 77 0.0017 32.3 5.4 24 226-249 206-229 (391)
186 cd05116 PTKc_Syk Catalytic dom 32.9 68 0.0015 29.8 4.6 26 226-251 119-144 (257)
187 PLN00034 mitogen-activated pro 32.8 21 0.00046 35.4 1.2 25 226-250 192-216 (353)
188 cd07871 STKc_PCTAIRE3 Catalyti 32.8 21 0.00046 34.2 1.1 26 226-251 127-152 (288)
189 cd05573 STKc_ROCK_NDR_like Cat 32.7 23 0.0005 34.8 1.4 27 226-252 125-151 (350)
190 KOG2381|consensus 32.6 1.4E+02 0.003 29.6 6.7 83 215-299 149-243 (286)
191 PHA02882 putative serine/threo 32.3 30 0.00064 33.4 2.1 24 226-249 150-173 (294)
192 cd05085 PTKc_Fer Catalytic dom 32.2 27 0.00058 32.3 1.7 25 226-250 117-141 (250)
193 cd06608 STKc_myosinIII_like Ca 32.2 24 0.00051 32.9 1.3 26 226-251 137-162 (275)
194 cd05574 STKc_phototropin_like 31.9 29 0.00062 33.6 1.9 29 225-253 126-154 (316)
195 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 31.6 1.2E+02 0.0026 28.6 6.2 25 226-250 132-156 (284)
196 KOG2345|consensus 31.6 38 0.00083 33.1 2.6 27 225-251 152-178 (302)
197 cd05577 STKc_GRK Catalytic dom 31.6 1.1E+02 0.0025 28.7 6.0 27 225-251 118-144 (277)
198 cd06612 STKc_MST1_2 Catalytic 31.5 1.1E+02 0.0023 28.2 5.7 29 225-253 122-150 (256)
199 cd05628 STKc_NDR1 Catalytic do 31.4 26 0.00057 35.0 1.6 25 226-250 125-149 (363)
200 cd06642 STKc_STK25-YSK1 Cataly 31.4 34 0.00074 32.3 2.3 25 226-250 125-149 (277)
201 cd05113 PTKc_Btk_Bmx Catalytic 31.4 1.4E+02 0.0031 27.7 6.6 25 226-250 124-148 (256)
202 cd05096 PTKc_DDR1 Catalytic do 31.1 78 0.0017 30.4 4.8 25 226-250 162-186 (304)
203 PHA03209 serine/threonine kina 31.1 1.1E+02 0.0025 30.4 6.2 25 226-250 181-205 (357)
204 PHA03211 serine/threonine kina 30.9 1E+02 0.0022 32.5 6.0 24 226-249 284-307 (461)
205 cd05617 STKc_aPKC_zeta Catalyt 30.9 5.1E+02 0.011 25.2 12.7 26 226-251 120-145 (327)
206 cd07872 STKc_PCTAIRE2 Catalyti 30.9 25 0.00053 34.1 1.3 25 226-250 128-152 (309)
207 cd05615 STKc_cPKC_alpha Cataly 30.7 26 0.00057 34.3 1.4 26 226-251 125-150 (323)
208 smart00219 TyrKc Tyrosine kina 30.7 84 0.0018 28.8 4.8 30 225-254 126-155 (258)
209 cd05054 PTKc_VEGFR Catalytic d 30.6 97 0.0021 30.6 5.5 25 226-250 197-221 (337)
210 cd06607 STKc_TAO Catalytic dom 30.5 2.8E+02 0.006 26.5 8.7 45 226-271 139-183 (307)
211 cd05099 PTKc_FGFR4 Catalytic d 30.5 4.9E+02 0.011 24.9 11.2 27 226-252 158-184 (314)
212 cd05037 PTK_Jak_rpt1 Pseudokin 30.4 2.3E+02 0.0049 25.9 7.8 28 226-253 125-159 (259)
213 PHA03210 serine/threonine kina 30.4 93 0.002 33.0 5.6 25 226-250 291-315 (501)
214 cd05082 PTKc_Csk Catalytic dom 30.3 55 0.0012 30.4 3.5 26 226-251 126-151 (256)
215 cd05034 PTKc_Src_like Catalyti 30.3 33 0.00071 31.9 2.0 28 225-252 126-153 (261)
216 PF02471 OspE: Borrelia outer 30.1 41 0.00089 27.5 2.1 34 388-423 49-85 (108)
217 cd05621 STKc_ROCK2 Catalytic d 30.0 29 0.00064 35.0 1.7 50 226-275 166-219 (370)
218 PRK09188 serine/threonine prot 30.0 41 0.00089 34.4 2.7 28 223-250 130-160 (365)
219 cd08529 STKc_FA2-like Catalyti 29.8 40 0.00087 31.1 2.5 27 226-252 125-151 (256)
220 cd07873 STKc_PCTAIRE1 Catalyti 29.7 26 0.00055 33.8 1.1 26 226-251 128-153 (301)
221 cd05586 STKc_Sck1_like Catalyt 29.4 28 0.00061 34.1 1.4 25 226-250 120-144 (330)
222 cd05102 PTKc_VEGFR3 Catalytic 29.4 40 0.00086 33.1 2.5 25 226-250 198-222 (338)
223 cd05593 STKc_PKB_gamma Catalyt 29.4 28 0.00061 34.3 1.4 25 226-250 119-143 (328)
224 cd06633 STKc_TAO3 Catalytic do 29.2 56 0.0012 31.7 3.5 48 226-274 145-192 (313)
225 cd06625 STKc_MEKK3_like Cataly 29.2 36 0.00077 31.6 2.0 24 226-249 128-151 (263)
226 cd05118 STKc_CMGC Catalytic do 29.1 31 0.00066 32.4 1.6 30 225-254 121-150 (283)
227 cd07837 STKc_CdkB_plant Cataly 29.1 1.3E+02 0.0028 28.5 5.9 25 226-250 134-159 (295)
228 smart00587 CHK ZnF_C4 abd HLH 28.9 50 0.0011 30.2 2.9 31 222-252 121-156 (196)
229 cd05063 PTKc_EphR_A2 Catalytic 28.9 1E+02 0.0022 28.7 5.1 27 225-251 130-156 (268)
230 cd05075 PTKc_Axl Catalytic dom 28.9 31 0.00067 32.3 1.5 26 226-251 136-161 (272)
231 cd07877 STKc_p38alpha_MAPK14 C 28.8 3.4E+02 0.0073 26.7 9.1 46 226-271 144-189 (345)
232 KOG0599|consensus 28.8 34 0.00073 34.0 1.7 46 226-271 147-194 (411)
233 KOG1006|consensus 28.7 38 0.00083 33.5 2.1 24 226-249 192-215 (361)
234 cd05584 STKc_p70S6K Catalytic 28.3 32 0.0007 33.7 1.6 24 226-249 124-147 (323)
235 cd05625 STKc_LATS1 Catalytic d 28.3 33 0.00072 34.5 1.7 25 226-250 125-149 (382)
236 cd05620 STKc_nPKC_delta Cataly 28.3 28 0.00061 34.0 1.2 25 226-250 120-144 (316)
237 KOG0577|consensus 27.8 2.4E+02 0.0053 31.2 7.9 117 215-352 135-262 (948)
238 KOG0983|consensus 27.7 43 0.00092 33.3 2.2 37 212-248 197-238 (391)
239 cd05072 PTKc_Lyn Catalytic dom 27.6 34 0.00073 31.9 1.5 27 226-252 127-153 (261)
240 cd08223 STKc_Nek4 Catalytic do 27.6 46 0.00099 30.8 2.4 26 225-250 125-150 (257)
241 cd07841 STKc_CDK7 Catalytic do 27.5 92 0.002 29.6 4.6 28 226-253 126-153 (298)
242 cd06649 PKc_MEK2 Catalytic dom 27.4 40 0.00087 33.1 2.1 25 226-250 128-152 (331)
243 cd07861 STKc_CDK1_euk Catalyti 27.4 29 0.00063 32.7 1.1 25 226-250 125-149 (285)
244 cd05595 STKc_PKB_beta Catalyti 27.3 28 0.0006 34.2 0.9 25 226-250 119-143 (323)
245 cd05596 STKc_ROCK Catalytic do 27.3 35 0.00077 34.3 1.7 27 226-252 166-192 (370)
246 KOG0662|consensus 27.1 87 0.0019 29.2 4.0 64 184-252 85-153 (292)
247 cd07869 STKc_PFTAIRE1 Catalyti 27.1 30 0.00066 33.3 1.1 26 226-251 127-152 (303)
248 cd07875 STKc_JNK1 Catalytic do 27.0 36 0.00078 33.9 1.7 27 226-252 150-176 (364)
249 cd06624 STKc_ASK Catalytic dom 27.0 1.7E+02 0.0037 27.2 6.3 26 226-251 132-158 (268)
250 cd07879 STKc_p38delta_MAPK13 C 26.9 57 0.0012 32.2 3.1 27 226-252 141-167 (342)
251 cd07863 STKc_CDK4 Catalytic do 26.7 34 0.00073 32.4 1.4 26 226-251 132-157 (288)
252 cd05619 STKc_nPKC_theta Cataly 26.7 33 0.00072 33.6 1.3 26 226-251 120-145 (316)
253 KOG2464|consensus 26.5 46 0.001 31.9 2.3 17 223-239 159-175 (246)
254 cd05056 PTKc_FAK Catalytic dom 26.5 5.2E+02 0.011 23.9 10.2 26 225-250 130-155 (270)
255 cd07835 STKc_CDK1_like Catalyt 26.4 37 0.00081 32.0 1.6 26 226-251 123-148 (283)
256 cd07853 STKc_NLK Catalytic dom 26.2 38 0.00082 33.9 1.7 26 226-251 127-152 (372)
257 PLN02236 choline kinase 26.2 57 0.0012 32.9 3.0 35 220-254 199-234 (344)
258 PRK12396 5-methylribose kinase 26.1 50 0.0011 34.4 2.5 28 224-252 230-257 (409)
259 cd07874 STKc_JNK3 Catalytic do 26.0 1.3E+02 0.0029 29.6 5.6 27 226-252 143-169 (355)
260 cd05040 PTKc_Ack_like Catalyti 26.0 44 0.00096 30.9 2.0 27 225-251 120-146 (257)
261 KOG0583|consensus 25.9 1.4E+02 0.0031 30.5 5.9 111 148-275 80-197 (370)
262 cd05114 PTKc_Tec_Rlk Catalytic 25.9 1.8E+02 0.004 26.8 6.3 28 224-251 122-149 (256)
263 cd07876 STKc_JNK2 Catalytic do 25.9 37 0.00079 33.8 1.5 25 226-250 147-171 (359)
264 cd05618 STKc_aPKC_iota Catalyt 25.9 38 0.00083 33.3 1.6 25 226-250 120-144 (329)
265 KOG0605|consensus 25.8 39 0.00085 36.1 1.7 29 226-254 265-293 (550)
266 cd05570 STKc_PKC Catalytic dom 25.7 34 0.00074 33.4 1.2 25 226-250 120-144 (318)
267 cd07838 STKc_CDK4_6_like Catal 25.7 47 0.001 31.2 2.2 28 225-252 130-157 (287)
268 cd06639 STKc_myosinIIIB Cataly 25.6 1.1E+02 0.0024 29.0 4.8 26 226-251 152-177 (291)
269 cd07847 STKc_CDKL1_4 Catalytic 25.6 43 0.00094 31.5 1.9 28 226-253 124-151 (286)
270 cd06654 STKc_PAK1 Catalytic do 25.5 1.4E+02 0.0031 28.5 5.6 27 226-252 140-166 (296)
271 cd06644 STKc_STK10_LOK Catalyt 25.5 48 0.001 31.6 2.2 26 226-251 134-159 (292)
272 cd05632 STKc_GRK5 Catalytic do 25.3 1.8E+02 0.004 27.5 6.3 26 226-251 126-151 (285)
273 cd05622 STKc_ROCK1 Catalytic d 25.3 44 0.00095 33.7 2.0 49 226-274 166-218 (371)
274 cd08228 STKc_Nek6 Catalytic do 25.2 40 0.00086 31.4 1.6 26 226-251 130-155 (267)
275 cd07834 STKc_MAPK Catalytic do 25.2 37 0.0008 33.1 1.4 30 225-254 126-155 (330)
276 cd08219 STKc_Nek3 Catalytic do 25.1 51 0.0011 30.5 2.3 26 226-251 124-149 (255)
277 COG2334 Putative homoserine ki 25.1 54 0.0012 33.1 2.6 71 226-308 202-277 (331)
278 COG5072 ALK1 Serine/threonine 24.9 52 0.0011 34.2 2.3 45 207-252 324-371 (488)
279 PF01386 Ribosomal_L25p: Ribos 24.8 60 0.0013 26.0 2.3 9 238-246 80-88 (88)
280 cd06623 PKc_MAPKK_plant_like C 24.5 39 0.00084 31.3 1.3 28 225-252 123-150 (264)
281 PRK06148 hypothetical protein; 24.5 1.6E+02 0.0035 34.4 6.6 27 226-252 208-237 (1013)
282 cd06650 PKc_MEK1 Catalytic dom 24.3 52 0.0011 32.4 2.3 25 226-250 128-152 (333)
283 cd06606 STKc_MAPKKK Catalytic 24.2 38 0.00083 30.9 1.2 32 224-255 123-154 (260)
284 cd08224 STKc_Nek6_Nek7 Catalyt 24.1 47 0.001 30.8 1.8 25 226-250 130-154 (267)
285 PRK09550 mtnK methylthioribose 24.1 56 0.0012 33.9 2.5 29 222-251 224-252 (401)
286 cd06627 STKc_Cdc7_like Catalyt 24.1 1.5E+02 0.0032 27.1 5.2 30 225-254 122-151 (254)
287 KOG1165|consensus 24.1 58 0.0013 33.2 2.4 26 225-250 147-177 (449)
288 cd05041 PTKc_Fes_like Catalyti 24.1 52 0.0011 30.3 2.1 28 225-252 116-143 (251)
289 cd05064 PTKc_EphR_A10 Catalyti 24.1 1.9E+02 0.004 27.1 6.0 26 226-251 131-156 (266)
290 cd05582 STKc_RSK_N N-terminal 24.0 44 0.00094 32.6 1.6 26 226-251 122-147 (318)
291 cd06611 STKc_SLK_like Catalyti 23.6 2.4E+02 0.0051 26.4 6.6 25 226-250 127-151 (280)
292 cd06605 PKc_MAPKK Catalytic do 23.4 45 0.00098 31.0 1.5 26 226-251 125-150 (265)
293 cd06631 STKc_YSK4 Catalytic do 23.3 1.2E+02 0.0026 28.2 4.4 27 225-251 125-151 (265)
294 cd06655 STKc_PAK2 Catalytic do 23.3 44 0.00095 32.2 1.5 27 225-251 138-164 (296)
295 cd05097 PTKc_DDR_like Catalyti 23.2 49 0.0011 31.6 1.8 26 225-250 152-177 (295)
296 cd05630 STKc_GRK6 Catalytic do 23.2 6.3E+02 0.014 23.8 11.5 26 226-251 126-151 (285)
297 PHA03207 serine/threonine kina 23.2 50 0.0011 33.5 2.0 25 226-250 209-233 (392)
298 cd05599 STKc_NDR_like Catalyti 23.2 43 0.00094 33.2 1.4 25 226-250 125-149 (364)
299 cd05123 STKc_AGC Catalytic dom 23.1 67 0.0015 29.4 2.7 30 223-252 114-143 (250)
300 cd05079 PTKc_Jak1_rpt2 Catalyt 23.1 49 0.0011 31.4 1.7 26 226-251 133-158 (284)
301 cd07856 STKc_Sty1_Hog1 Catalyt 23.1 1.1E+02 0.0023 30.1 4.2 29 225-253 131-159 (328)
302 KOG3087|consensus 23.0 66 0.0014 30.3 2.4 103 130-253 56-167 (229)
303 cd05044 PTKc_c-ros Catalytic d 23.0 55 0.0012 30.5 2.1 25 226-250 130-159 (269)
304 cd05629 STKc_NDR_like_fungal C 22.9 48 0.001 33.2 1.7 24 226-249 125-148 (377)
305 PF11094 UL11: Membrane-associ 22.8 66 0.0014 22.0 1.8 17 230-246 14-30 (39)
306 cd05583 STKc_MSK_N N-terminal 22.7 49 0.0011 31.4 1.7 25 226-250 129-153 (288)
307 cd06658 STKc_PAK5 Catalytic do 22.5 1.2E+02 0.0025 29.2 4.3 26 226-251 142-167 (292)
308 cd05579 STKc_MAST_like Catalyt 22.4 51 0.0011 30.4 1.7 27 226-252 117-143 (265)
309 cd08215 STKc_Nek Catalytic dom 22.4 48 0.001 30.3 1.5 30 225-254 126-155 (258)
310 cd07832 STKc_CCRK Catalytic do 22.4 48 0.001 31.2 1.5 28 226-253 123-150 (286)
311 cd07830 STKc_MAK_like Catalyti 22.3 66 0.0014 30.3 2.5 30 223-252 120-149 (283)
312 cd05050 PTKc_Musk Catalytic do 22.2 46 0.00099 31.6 1.3 26 226-251 154-179 (288)
313 PLN03224 probable serine/threo 22.0 1.5E+02 0.0033 31.7 5.4 26 226-251 333-358 (507)
314 COG3960 Glyoxylate carboligase 21.9 71 0.0015 32.3 2.6 28 219-246 271-303 (592)
315 cd05589 STKc_PKN Catalytic dom 21.9 44 0.00096 32.7 1.2 25 226-250 125-149 (324)
316 cd07851 STKc_p38 Catalytic dom 21.6 88 0.0019 30.9 3.3 28 226-253 142-169 (343)
317 cd05092 PTKc_TrkA Catalytic do 21.6 51 0.0011 31.2 1.6 25 226-250 146-170 (280)
318 cd06622 PKc_MAPKK_PBS2_like Ca 21.4 55 0.0012 31.0 1.7 26 226-251 127-152 (286)
319 cd06641 STKc_MST3 Catalytic do 21.4 61 0.0013 30.6 2.0 25 225-249 124-148 (277)
320 cd05065 PTKc_EphR_B Catalytic 21.2 1.6E+02 0.0035 27.4 4.9 25 226-250 130-154 (269)
321 cd07840 STKc_CDK9_like Catalyt 21.2 47 0.001 31.1 1.2 30 225-254 123-152 (287)
322 cd06619 PKc_MKK5 Catalytic dom 21.2 55 0.0012 31.0 1.7 26 226-251 119-144 (279)
323 PRK05943 50S ribosomal protein 21.2 52 0.0011 26.7 1.3 9 238-246 83-91 (94)
324 cd08218 STKc_Nek1 Catalytic do 21.1 2.7E+02 0.0058 25.5 6.3 26 226-251 125-150 (256)
325 cd05605 STKc_GRK4_like Catalyt 20.8 2.6E+02 0.0056 26.5 6.3 26 226-251 126-151 (285)
326 KOG0614|consensus 20.7 1.3E+02 0.0027 32.6 4.2 58 200-257 506-577 (732)
327 cd07870 STKc_PFTAIRE2 Catalyti 20.6 61 0.0013 30.8 1.9 26 225-250 126-151 (291)
328 cd06648 STKc_PAK_II Catalytic 20.6 1.6E+02 0.0035 27.9 4.8 25 226-250 139-163 (285)
329 cd00495 Ribosomal_L25_TL5_CTC 20.5 58 0.0013 26.1 1.4 9 238-246 81-89 (91)
330 cd08216 PK_STRAD Pseudokinase 20.1 3.6E+02 0.0077 25.7 7.2 25 226-250 125-149 (314)
331 cd05062 PTKc_IGF-1R Catalytic 20.0 64 0.0014 30.4 1.8 25 226-250 143-167 (277)
No 1
>cd00895 PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), class II, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do not
Probab=100.00 E-value=1e-87 Score=666.30 Aligned_cols=337 Identities=25% Similarity=0.389 Sum_probs=305.6
Q ss_pred ccchhHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHhhhc--cCCCCceecCCCCCCCceEEeecCCcceeccCCCCCc
Q psy8358 7 PRLSPQLEFIRVLINMSKTLASLRSKEAKTSRLLADLTTLN--HNLPARVWLPLYSDQPHHIVRIPPSAAAVLNSKDKAP 84 (424)
Q Consensus 7 ~~l~~q~~~~~~l~~i~~~~~~~~~~~~r~~~l~~~l~~~~--~~lp~~~~lP~~~~~~~~i~~i~~~~~~v~~S~~k~p 84 (424)
.+|.+|+++++.|.+||+++|+.+ +++|++.|+++|+.+. ..+|.++++|++| ++.|++|.+++|+||+|++ .|
T Consensus 2 ~~~~~Q~~~~~~L~~i~~~vk~~~-~~~r~~~l~~~L~~~~~~~~~~~~~~lPldP--~~~v~~i~~~~~~v~~S~~-~P 77 (354)
T cd00895 2 EEFDRQCWLVNVLAKLAQQVREAA-PSARQGILREGLEEVKQFFSINGSCRLPLSP--SLLVKGIVPRDCSYFNSNA-VP 77 (354)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHhhhhhccCCCCCcCCCCC--CeEEEEEEcCceEEecccC-CC
Confidence 478999999999999999999876 5678889999998874 2457789999988 8999999999999999995 69
Q ss_pred EEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceEEEecCCCc
Q psy8358 85 YIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCLSNDSG 164 (424)
Q Consensus 85 ~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~~~~G 164 (424)
++++|.+. . +.|..|.+|||.|||||||++++|++++|+++|+++++|++++||+|+|||+++|
T Consensus 78 l~l~f~~~-----------d-----~~~~~~~~IfK~GDDLRQD~l~lQli~lmd~i~~~~~ldl~l~pY~vl~tg~~~G 141 (354)
T cd00895 78 LKLSFQNV-----------D-----PLGENIRVIFKCGDDLRQDMLTLQMIRIMNKIWVQEGLDMRMVIFRCFSTGRGRG 141 (354)
T ss_pred eEEEEEec-----------C-----CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHHHcCCCceEEEEEEEecCCCce
Confidence 99998631 1 2345799999999999999999999999999999999999999999999999999
Q ss_pred eeeeeCCcccHHHHHhhcc-------ccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEec
Q psy8358 165 LIEPILNTVSLHQIKKNSQ-------VSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSG 237 (424)
Q Consensus 165 lIE~v~~~~tl~~i~~~~~-------~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~ 237 (424)
+||||||+.|+++|++..+ .+|.+||.+.+ ++++.|.+|++||++|||||||+||||||||||||||||++
T Consensus 142 ~IE~V~ns~tl~~I~~~~g~~g~~~~~~l~~~l~~~~--~~~~~~~~a~~nFi~S~AgYsV~tYiLgIgDRHndNImi~~ 219 (354)
T cd00895 142 MVEMIPNAETLRKIQVEHGVTGSFKDRPLADWLQKHN--PTEDEYEKAVENFIYSCAGCCVATYVLGICDRHNDNIMLKT 219 (354)
T ss_pred EEEEeCChhhHHHHHHHhCcCcccccchHHHHHHHhC--CChHHHHHHHHHHHHHHHHHHHHHHHccccccCCCceeEcC
Confidence 9999999999999987643 36899998764 46678999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccCCCCC--CCCCCCCccccHHHHHHhCCC----cchhhHHHHHHHHHHHHhcChhHHHHHHHHHhcC
Q psy8358 238 EGHLIHIDFGFILSLSPRN--LGFETSPFKLTLEVVEVFGGV----DMFCYFKILMLQGLIAARKHMDKILSLVEIMRSG 311 (424)
Q Consensus 238 ~G~~~HIDFg~~fg~~~~~--~~~E~vPFrLT~~~~~~mg~~----~~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~ 311 (424)
+||+|||||||+||++|++ +.+|++||+||++|+++|||. +.|..|+.+|+.||.+||+|++.|++++++|+.
T Consensus 220 ~GhlfHIDFG~iLg~~~~~g~~~re~~PF~Lt~emv~vm~gg~~~S~~f~~F~~lc~~ay~~lRk~~~~il~L~~lM~~- 298 (354)
T cd00895 220 TGHMFHIDFGRFLGHAQMFGNIKRDRAPFVFTSDMAYVINGGDKPSSRFHDFVDLCCQAYNLIRKHTHLFLNLLGLMLS- 298 (354)
T ss_pred CCCEEEEeeHHhcCCCcccCCCCcCCCCccccHHHHHHhcCCCCCChhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHc-
Confidence 9999999999999998744 457999999999999999652 568999999999999999999999999999995
Q ss_pred CCCcccccchhhHHhhhhhcccCccHHHHHHHHHHHHHHhhhcccchhhhhhHHHh
Q psy8358 312 SQLPCFKSGAATVQNLKNRFHMNLTEEQLQVLIDKLVDSSIHSLSTKLYDGFQYYT 367 (424)
Q Consensus 312 ~~lp~~~~~~~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~~~~~t~~~d~~Q~~~ 367 (424)
+++||++ ..++++++++||++++||+||..+|.++|++|+++|+|+++|.++.+.
T Consensus 299 sgiP~l~-~~~~i~~l~~rf~l~~se~eA~~~f~~lI~~s~~s~~t~~~~~~H~~a 353 (354)
T cd00895 299 CGIPELS-DLEDLKYVYDALRPQDTEADATTYFTRLIESSLGSVATKLNFFIHNLA 353 (354)
T ss_pred CCCcccC-cchHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhhhHhHHHHHHHhc
Confidence 7999998 457899999999999999999999999999999999999999988753
No 2
>cd00891 PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms c
Probab=100.00 E-value=2.2e-86 Score=663.07 Aligned_cols=338 Identities=30% Similarity=0.486 Sum_probs=311.6
Q ss_pred ccchhHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHhhhccCCCCceecCCCCCCCceEEeecCCcceeccCCCCCcEE
Q psy8358 7 PRLSPQLEFIRVLINMSKTLASLRSKEAKTSRLLADLTTLNHNLPARVWLPLYSDQPHHIVRIPPSAAAVLNSKDKAPYI 86 (424)
Q Consensus 7 ~~l~~q~~~~~~l~~i~~~~~~~~~~~~r~~~l~~~l~~~~~~lp~~~~lP~~~~~~~~i~~i~~~~~~v~~S~~k~p~~ 86 (424)
++|.+|++|+++|.+|+.++|+..++++|++.|+++|+.++..+|.++++|++| ++.|.+|++++|+||+|++ .|.+
T Consensus 2 ~~l~~q~~~~~~l~~i~~~ik~~~~~~~~~~~l~~~L~~~~~~~~~~~~lP~~p--~~~i~~i~~~~~~v~~S~~-~P~~ 78 (352)
T cd00891 2 SELLKQVEVINELKTLAKKVKREKSKSQRKELLREELKKLENNLPQEFTLPLDP--RLEIKGLIIEKCKVMDSKK-KPLW 78 (352)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhhhhccCCCCccCCCCC--ceEEEEEeccceEEecccc-CCcE
Confidence 578999999999999999999976688999999999999865678899999988 8999999999999999995 5898
Q ss_pred EEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceEEEecCCCcee
Q psy8358 87 IYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCLSNDSGLI 166 (424)
Q Consensus 87 ~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~~~~GlI 166 (424)
+.|.. ..+.|+.|.+|+|+|||||||+++||++++||.+|++++++++++||+|+|||+++|+|
T Consensus 79 l~f~~----------------~d~~g~~~~~i~K~gDDLRqD~l~~Ql~~l~~~i~~~~~ldl~l~~Y~Vip~~~~~GlI 142 (352)
T cd00891 79 LVFKN----------------ADPSGEPIKVIFKVGDDLRQDMLTLQMIRLMDKIWKKEGLDLRMTPYGCIATGDGVGMI 142 (352)
T ss_pred EEEEe----------------cCCCCCEEEEEeccCCchhHHHHHHHHHHHHHHHHHHCCCCeeeEEEEEEEccCCceEE
Confidence 88862 11236789999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCcccHHHHHhhcc--------ccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEecC
Q psy8358 167 EPILNTVSLHQIKKNSQ--------VSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSGE 238 (424)
Q Consensus 167 E~v~~~~tl~~i~~~~~--------~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~~ 238 (424)
|||+|+.|+++|+++.+ ..+.+|+.+.++ +++.|.+|++||++|||+|||+||||||||||+|||||+++
T Consensus 143 E~V~ns~tl~~I~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~a~~nF~~S~A~ysv~~YiLgigDRH~~NILi~~~ 220 (352)
T cd00891 143 EVVPNSETIAKIQKKAGGVGGAFKDNPLMNWLKKKNK--GEEDYEKAVENFTYSCAGYCVATYVLGIGDRHNDNIMLTKT 220 (352)
T ss_pred EEeCCCccHHHHHHhcCccccccccchHHHHHHHhCC--CHHHHHHHHHHHhhhHHHHHHHHHHccccccCCCceEECCC
Confidence 99999999999998753 368999988764 45689999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccCCCCCC--CCCCCCccccHHHHHHhCCCc--chhhHHHHHHHHHHHHhcChhHHHHHHHHHhcCCCC
Q psy8358 239 GHLIHIDFGFILSLSPRNL--GFETSPFKLTLEVVEVFGGVD--MFCYFKILMLQGLIAARKHMDKILSLVEIMRSGSQL 314 (424)
Q Consensus 239 G~~~HIDFg~~fg~~~~~~--~~E~vPFrLT~~~~~~mg~~~--~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~~~l 314 (424)
||+|||||||+||++|++. .||+||||||++|+++|||.+ .|+.|+.+|+.+|.+||+|++.|++++++|+. +++
T Consensus 221 G~~~HIDFG~ilg~~~~~~~~~~E~~PFrLT~~mv~~mGg~~s~~~~~F~~~c~~~~~~LR~~~~~il~l~~lm~~-~~l 299 (352)
T cd00891 221 GHLFHIDFGHFLGNFKKKFGIKRERAPFVLTPDMAYVMGGGDSEKFQRFEDLCCKAYNILRKHGNLFINLFSLMLS-AGI 299 (352)
T ss_pred CCEEEEehHHhhccCCccCCCCCCCCCeeecHHHHHHhCCCCCcccchHHHHHHHHHHHHhcCHHHHHHHHHhhcc-CCC
Confidence 9999999999999988654 579999999999999999974 67999999999999999999999999999996 689
Q ss_pred cccccchhhHHhhhhhcccCccHHHHHHHHHHHHHHhhhcccchhhhhhHHHh
Q psy8358 315 PCFKSGAATVQNLKNRFHMNLTEEQLQVLIDKLVDSSIHSLSTKLYDGFQYYT 367 (424)
Q Consensus 315 p~~~~~~~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~~~~~t~~~d~~Q~~~ 367 (424)
||++ +.+++.++++||++++||++|..++.++|++|+++|+|++||.+|.+.
T Consensus 300 p~~~-~~~~i~~l~~r~~l~~s~~~a~~~~~~lI~~s~~~~~~~~~~~~h~~~ 351 (352)
T cd00891 300 PELQ-SIEDIEYLRDALALDKSDEEATEYFRKLIHESLNSKTTKVNNFIHNLA 351 (352)
T ss_pred CccC-cHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcchHhHHHHHHHhh
Confidence 9998 667899999999999999999999999999999999999999998764
No 3
>cd05167 PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), Type III, alpha isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. PI4KIIIalpha is a 220 kDa protein found in the plasma membrane and the endoplasmic reticulum (ER). The role of PI4KIIIalpha in the ER remains unclear. In the plasma membrane, it provides PtdIns(4)P, which is then converted by PI5Ks to PtdIns(4,5)P2, an important signaling mole
Probab=100.00 E-value=1.5e-86 Score=651.56 Aligned_cols=306 Identities=40% Similarity=0.660 Sum_probs=280.2
Q ss_pred ecCCCCCCCceEEeecCCcceeccCCCCCcEEEEecCcchhhhhhhhcCCCCCc-CCCcceEEEEEecCCchhhHHHHHH
Q psy8358 55 WLPLYSDQPHHIVRIPPSAAAVLNSKDKAPYIIYCEEPWSKKEARIRQSSPYGH-IPSWRLMAAIVKSGDDLRQELLASQ 133 (424)
Q Consensus 55 ~lP~~~~~~~~i~~i~~~~~~v~~S~~k~p~~~~~~~~~~~k~~~~~~~~~~g~-~~~~~~~~~i~K~gdDLRqD~~~~Q 133 (424)
|||++| ++.|++|.+++|++|+|++|+|++++|+..-... ..+.+. ......+.+|||+|||||||+++||
T Consensus 1 ylP~~P--~~~v~~i~~~~~~~~~S~ak~P~~l~F~~~~~~~------~~~~~~~~~~~~~~~~IfK~gDDLRQD~l~~Q 72 (311)
T cd05167 1 YLPSNP--DYVIVGIDYKSGTPLQSHAKAPILVTFKVKDRGG------DELEEVDDGKVSWQACIFKVGDDCRQDMLALQ 72 (311)
T ss_pred CCCCCC--ceEEEEEEccccEEeccCCCCceEEEEEecCCCc------cccccccccccceEEEEEeCCCCccHHHHHHH
Confidence 789988 8999999999999999998999999997311000 000000 0112458999999999999999999
Q ss_pred HHHHHHHHHHhCCCCceeecceEEEecCCCceeeeeCCcccHHHHHhhccccHHHHHHHHhCCCChHHHHHHHHHHHHHh
Q psy8358 134 LLTLLQKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKNSQVSLLEYFIQEFGDINSEGFLAAQKNFVQST 213 (424)
Q Consensus 134 ~~~~~~~i~~~~~~~l~l~~Y~vip~~~~~GlIE~v~~~~tl~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~F~~Sl 213 (424)
++++||++|++++++++++||+|+|||+++|+||||+|+.|+++|++..++.+.+||.+.++++++..|.+|++||++||
T Consensus 73 li~lm~~i~~~~~ldl~l~~Y~vi~t~~~~GlIE~V~ns~s~~~i~~~~~~~l~~~f~~~~~~~~~~~~~~a~~nF~~S~ 152 (311)
T cd05167 73 LISLFKNIFQSAGLDLYLFPYRVVATGPGCGVIEVVPNSKSRDQIGRTTDNGLYEYFTSKYGDESSLAFQKARENFIRSM 152 (311)
T ss_pred HHHHHHHHHHHCCCCeEeEEEeEEecCCCceEEEEeCCcHHHHHHHhhcccHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999998888889999999999999
Q ss_pred hHHHHHHHHhccCCCCCCceEEecCCcEEEEeccccccCCCCC-CCCCCCCccccHHHHHHhCCC---cchhhHHHHHHH
Q psy8358 214 AAYSLVCYLLQVKDRHNGNILLSGEGHLIHIDFGFILSLSPRN-LGFETSPFKLTLEVVEVFGGV---DMFCYFKILMLQ 289 (424)
Q Consensus 214 A~~sv~~yiLgigDRH~~NIli~~~G~~~HIDFg~~fg~~~~~-~~~E~vPFrLT~~~~~~mg~~---~~~~~f~~~~~~ 289 (424)
|||||+|||||||||||||||||++||+|||||||+||++|+. +.||+||||||++|+++|||. +.|+.|+.+|++
T Consensus 153 Agysv~tYiLgigDRHn~NILid~~G~l~HIDFG~il~~~p~~~~~~E~~PFkLT~emv~~mGg~~~s~~f~~F~~~~~~ 232 (311)
T cd05167 153 AAYSLISYLLQIKDRHNGNIMIDDDGHIIHIDFGFIFEISPGGNLKFESAPFKLTKEMVQIMGGSMEATPFKWFVELCVR 232 (311)
T ss_pred HHHHHHHHHhhccccCccceEEcCCCCEEEEeeHHhhccCCCCCCCcCCCCEeecHHHHHHhCCCCcchhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999966 789999999999999999987 468899999999
Q ss_pred HHHHHhcChhHHHHHHHHHhcCCCCcccccchhhHHhhhhhcccCccHHHHHHHHHHHHHHhhhcccchhhhhhHHHhhc
Q psy8358 290 GLIAARKHMDKILSLVEIMRSGSQLPCFKSGAATVQNLKNRFHMNLTEEQLQVLIDKLVDSSIHSLSTKLYDGFQYYTNA 369 (424)
Q Consensus 290 ~~~~LR~~~~~i~~ll~~~~~~~~lp~~~~~~~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~~~~~t~~~d~~Q~~~nG 369 (424)
||.+||+|++.|++++++|+ ++++||++ .+++.++++||++++||++|..++.++|++|+++|+|++||.||+++||
T Consensus 233 ~~~~lR~~~~~il~l~~lm~-~s~lp~~~--~~~i~~l~~rf~l~~se~~a~~~~~~lI~~s~~~~~t~~yD~~q~~~~g 309 (311)
T cd05167 233 AFLAVRPYMDEIVSLVELML-DSGLPCFR--GDTIKNLRQRFAPEKSEREAAEFMLSLIAESYEKFRTKGYDQFQYYQNG 309 (311)
T ss_pred HHHHHHcCHHHHHHHHHHHH-cCCchhhh--HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhchhHHHHHHHHHHhcC
Confidence 99999999999999999999 47999998 5789999999999999999999999999999999999999999999999
Q ss_pred ch
Q psy8358 370 FQ 371 (424)
Q Consensus 370 I~ 371 (424)
|.
T Consensus 310 i~ 311 (311)
T cd05167 310 IP 311 (311)
T ss_pred CC
Confidence 83
No 4
>cd05176 PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), class II, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do n
Probab=100.00 E-value=5.1e-86 Score=653.99 Aligned_cols=337 Identities=25% Similarity=0.389 Sum_probs=302.3
Q ss_pred ccchhHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHhhhccCC-CCceecCCCCCCCceEEeecCCcceeccCCCCCcE
Q psy8358 7 PRLSPQLEFIRVLINMSKTLASLRSKEAKTSRLLADLTTLNHNL-PARVWLPLYSDQPHHIVRIPPSAAAVLNSKDKAPY 85 (424)
Q Consensus 7 ~~l~~q~~~~~~l~~i~~~~~~~~~~~~r~~~l~~~l~~~~~~l-p~~~~lP~~~~~~~~i~~i~~~~~~v~~S~~k~p~ 85 (424)
.+|.+|+++++.|.+|+.++|+.+ .+.++..|++++..+...+ |..+.+|++| ++.+.++.+++|+||+|++ .|.
T Consensus 2 ~~l~~Q~~~~~~L~~i~~~vk~~~-~~~~~~~l~~~~~~l~~~~~~~~~~lPl~p--~~~~~~~~~~~c~v~~S~~-~Pl 77 (353)
T cd05176 2 EELEKQTRLVQLLGAVAEKVRQAS-SSTRQVVLQEGMERVQSFFQKNKCRLPLSP--SLVAKELNIKVCSFFSSNA-VPL 77 (353)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcc-cchhHHHHHHHHHHHHhhcCCCCCCCCCCc--ceeEccEehheeEEecccC-Cce
Confidence 478999999999999999999864 4456677888887775443 5568899987 8999999999999999995 599
Q ss_pred EEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceEEEecCCCce
Q psy8358 86 IIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCLSNDSGL 165 (424)
Q Consensus 86 ~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~~~~Gl 165 (424)
++.|.+ .+ +.|+.|.+|||.|||||||+++||++++||++|+++++|++++||+|+|||+++|+
T Consensus 78 ~l~f~~-----------~d-----~~g~~~~~ifK~gDDLRQD~l~lQli~lmd~i~~~~~ldL~l~pY~vl~tg~~~Gl 141 (353)
T cd05176 78 KIALVN-----------AD-----PLGEEINVMFKVGEDLRQDMLALQMIKIMDKIWLQEGLDLRMVIFKCLSTGKDRGM 141 (353)
T ss_pred EEEEEc-----------cC-----CCCCEEEEEEeCCCCccHHHHHHHHHHHHHHHHHHCCCCeEEEEEEEEEcCCCceE
Confidence 998862 11 23568999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCcccHHHHHhhcc-------ccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEecC
Q psy8358 166 IEPILNTVSLHQIKKNSQ-------VSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSGE 238 (424)
Q Consensus 166 IE~v~~~~tl~~i~~~~~-------~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~~ 238 (424)
||||||+.|+++|++.++ .++.+|+.+.. ++++.|.+|++||++|||||||+||||||||||||||||+++
T Consensus 142 IE~V~ns~tl~~I~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~a~~nFi~S~AgYsv~tYiLGIgDRHn~NILi~~~ 219 (353)
T cd05176 142 VELVPASETLRKIQVEYGVTGSFKDKPLAEWLRKYN--PAEEEYEKASENFIYSCAGCCVATYVLGICDRHNDNIMLRST 219 (353)
T ss_pred EEEeCCcHhHHHHHHHhCcCCccccchHHHHHHHhC--CChHHHHHHHHHHHHHHHHHHHHhhhccccCcCCcceEEcCC
Confidence 999999999999987653 36788887643 456789999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccCCCCC--CCCCCCCccccHHHHHHhCCC----cchhhHHHHHHHHHHHHhcChhHHHHHHHHHhcCC
Q psy8358 239 GHLIHIDFGFILSLSPRN--LGFETSPFKLTLEVVEVFGGV----DMFCYFKILMLQGLIAARKHMDKILSLVEIMRSGS 312 (424)
Q Consensus 239 G~~~HIDFg~~fg~~~~~--~~~E~vPFrLT~~~~~~mg~~----~~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~~ 312 (424)
||+|||||||+||++|++ +.+|++|||||++|+++|||. +.|..|+.+|+.||.+||+|++.|++++++|+. +
T Consensus 220 Ghl~HIDFG~ilg~~~~~g~~~~e~~PFkLT~emv~~mgG~~~~s~~f~~F~~lc~~af~~LRk~~~~il~L~~lM~~-s 298 (353)
T cd05176 220 GHMFHIDFGKFLGHAQMFGSFKRDRAPFVLTSDMAYVINGGEKPTIRFQLFVDLCCQAYNLIRKHSNLFLNLLSLMTQ-S 298 (353)
T ss_pred CCEEEEeeHHhcCCCccccCCCCCCCCeeecHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC-C
Confidence 999999999999999854 457999999999999999874 358899999999999999999999999999985 8
Q ss_pred CCcccccchhhHHhhhhhcccCccHHHHHHHHHHHHHHhhhcccchhhhhhHHHh
Q psy8358 313 QLPCFKSGAATVQNLKNRFHMNLTEEQLQVLIDKLVDSSIHSLSTKLYDGFQYYT 367 (424)
Q Consensus 313 ~lp~~~~~~~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~~~~~t~~~d~~Q~~~ 367 (424)
++||++ +..+++++++||++++||+||..+|.++|++|+++|+|+++|.++.+.
T Consensus 299 ~iP~~~-~~~~i~~l~~r~~l~~sd~ea~~~f~~lI~~s~~s~~t~~~~~~H~~a 352 (353)
T cd05176 299 GLPELT-GVQDLKYVYDALQPQTTDAEATIFFTRLIESSLGSVATKFNFFIHNLA 352 (353)
T ss_pred CCcccC-CchHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhchhHhHHHHHHHhc
Confidence 999998 567899999999999999999999999999999999999999988764
No 5
>cd05177 PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), class II, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do n
Probab=100.00 E-value=8e-86 Score=655.30 Aligned_cols=336 Identities=26% Similarity=0.405 Sum_probs=302.6
Q ss_pred ccchhHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHhhhccCC--CCceecCCCCCCCceEEeecCCcceeccCCCCCc
Q psy8358 7 PRLSPQLEFIRVLINMSKTLASLRSKEAKTSRLLADLTTLNHNL--PARVWLPLYSDQPHHIVRIPPSAAAVLNSKDKAP 84 (424)
Q Consensus 7 ~~l~~q~~~~~~l~~i~~~~~~~~~~~~r~~~l~~~l~~~~~~l--p~~~~lP~~~~~~~~i~~i~~~~~~v~~S~~k~p 84 (424)
.+|.+|+++++.|.+|+.++|+.+ +++|++.|+++|++++..+ |.++++|++| ++.|++|.+++|+||+|++ .|
T Consensus 2 ~~l~~q~~~~~~L~~~~~~vk~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~lPl~P--~~~i~~i~~~~~~v~~S~~-~P 77 (354)
T cd05177 2 KEFSKETKLISILIDAAEKVKTAS-DTRRKEVLKREASRLEDFFQDVVSCCLPLNP--ALRVKGIDADACSYFTSNA-AP 77 (354)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcC-hhHHHHHHHHHHHHhhhhccCCCCCccCCCC--CeEEEEEecCccEEehhhc-CC
Confidence 478999999999999999999875 5667778999998876433 4578999987 8999999999999999995 69
Q ss_pred EEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceEEEecCCCc
Q psy8358 85 YIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCLSNDSG 164 (424)
Q Consensus 85 ~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~~~~G 164 (424)
.++.|.. ..+.|+.|.+|||+|||||||+++||++++||++|++++++++++||+|+|||+++|
T Consensus 78 l~l~f~~----------------~d~~~~~~~~IfK~gDDLRQD~l~lQli~lmd~i~~~~~ldl~l~pY~vl~t~~~~G 141 (354)
T cd05177 78 LKISFIN----------------ANPLAKNISIIFKTGDDLRQDMLVLQIVRVMDNIWLQEGLDMQMIIYRCLSTGKTQG 141 (354)
T ss_pred CEEEEEe----------------cCCCCCeEEEEEeCCCcccHHHHHHHHHHHHHHHHHHcCCCceEEEEEEEecCCCce
Confidence 9998862 112356799999999999999999999999999999999999999999999999999
Q ss_pred eeeeeCCcccHHHHHhhcc-------ccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEec
Q psy8358 165 LIEPILNTVSLHQIKKNSQ-------VSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSG 237 (424)
Q Consensus 165 lIE~v~~~~tl~~i~~~~~-------~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~ 237 (424)
+||||+|+.|+++|+++.+ .++.+||...+ ++++.|.+|++||++|||||||+||||||||||||||||++
T Consensus 142 lIE~V~ns~tl~~I~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~a~~nF~~S~AgysvvtYiLGigDRHn~NILi~~ 219 (354)
T cd05177 142 LVQMVPDAVTLAKIHRESGLIGPLKENTIEKWFHMHN--KLKEDYDKAVRNFFHSCAGWCVVTFILGVCDRHNDNIMLTH 219 (354)
T ss_pred EEEEeCChHhHHHHHHhhCCCcccchhhHHHHHHHhC--CChHHHHHHHHHHHHHHHHHHHHHHHhcccCcCCCceeEcC
Confidence 9999999999999998752 47899998765 45678999999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccCCCCCC--CCCCCCccccHHHHHHh--CCC--cchhhHHHHHHHHHHHHhcChhHHHHHHHHHhcC
Q psy8358 238 EGHLIHIDFGFILSLSPRNL--GFETSPFKLTLEVVEVF--GGV--DMFCYFKILMLQGLIAARKHMDKILSLVEIMRSG 311 (424)
Q Consensus 238 ~G~~~HIDFg~~fg~~~~~~--~~E~vPFrLT~~~~~~m--g~~--~~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~ 311 (424)
+||+|||||||+||++|++. .+|++|||||++|+++| ||. +.|+.|+.+|++||.+||+|++.|++++++|+.
T Consensus 220 ~G~~~HIDFG~ilg~~~~~~~~~~E~~PF~LT~emv~~~~~GG~~s~~f~~F~~~c~~a~~~lR~~~~~il~l~~lm~~- 298 (354)
T cd05177 220 SGHMFHIDFGKFLGHAQTFGSIKRDRAPFIFTSEMEYFITEGGKKPQRFQRFVELCCRAYNIVRKHSQLLLNLLEMMLH- 298 (354)
T ss_pred CCCEEEEehHHhcCCCccccCCCcCCCCeeccHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhc-
Confidence 99999999999999998654 57999999999999876 564 568899999999999999999999999999996
Q ss_pred CCCcccccchhhHHhhhhhcccCccHHHHHHHHHHHHHHhhhcccchhhhhhHHH
Q psy8358 312 SQLPCFKSGAATVQNLKNRFHMNLTEEQLQVLIDKLVDSSIHSLSTKLYDGFQYY 366 (424)
Q Consensus 312 ~~lp~~~~~~~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~~~~~t~~~d~~Q~~ 366 (424)
+++||++ +..+++++++||++++||+||..+|.++|++|+++|.|++++.++.+
T Consensus 299 s~iP~~~-~~~~i~~l~~~~~l~~sd~eA~~~f~~lI~~s~~~~~~~~~~~~H~~ 352 (354)
T cd05177 299 AGLPELK-DIQDLKYVYNNLRPQDTDLEATSYFTKKIKESLECFPVKLNNLIHTL 352 (354)
T ss_pred CCCcccC-cchHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhhHHhHHHHHHHh
Confidence 6899998 55679999999999999999999999999999999999998887765
No 6
>cd00894 PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), class IB, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and
Probab=100.00 E-value=1.3e-85 Score=654.56 Aligned_cols=340 Identities=26% Similarity=0.400 Sum_probs=298.7
Q ss_pred ccchhHHHHHHHHHHHHHHHhccC-----ChHHHHHHHHHHHhhhc-cCCCCceecCCCCCCCceEEeecCCcceeccCC
Q psy8358 7 PRLSPQLEFIRVLINMSKTLASLR-----SKEAKTSRLLADLTTLN-HNLPARVWLPLYSDQPHHIVRIPPSAAAVLNSK 80 (424)
Q Consensus 7 ~~l~~q~~~~~~l~~i~~~~~~~~-----~~~~r~~~l~~~l~~~~-~~lp~~~~lP~~~~~~~~i~~i~~~~~~v~~S~ 80 (424)
.+|.+|++++++|.+|+.++|..+ ++.++.+.|++.|..+. ..+|..+++|++| ++.+.+|.+++|+||+|+
T Consensus 2 ~~~~~q~~~~~~l~~i~~~vk~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~lPl~P--~~~~~~i~~~~~~v~~S~ 79 (365)
T cd00894 2 HDFTQQVQVIEMLQKVTLDIKSLSAEKYDVSSQVISQLKQKLENLQNLNLPESFRVPYDP--GLRAGALVIEKCKVMASK 79 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhhccCCCCCCCCCCC--ceEEEEEEcCceEEEccc
Confidence 478999999999999999999854 23344567777777654 4578899999988 899999999999999999
Q ss_pred CCCcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceEEEec
Q psy8358 81 DKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCLS 160 (424)
Q Consensus 81 ~k~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~ 160 (424)
+.|.++.|... . +....+..+.+|||+|||||||+++||++++||++|+++++|++++||+|+|||
T Consensus 80 -~~Pl~l~f~~~-----------d--~~~~~~~~~~~IfK~GDDLRQD~l~lQli~lmd~i~~~~~ldL~l~pY~vi~tg 145 (365)
T cd00894 80 -KKPLWLEFKCA-----------D--PTALSNETIGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTG 145 (365)
T ss_pred -CCceEEEEECC-----------C--CCccCCCceeEEEeCCCcccHHHHHHHHHHHHHHHHHHcCCCeEEEEEEEEEec
Confidence 56999988631 1 111234578999999999999999999999999999999999999999999999
Q ss_pred CCCceeeeeCCcccHHHHHhhcc--------ccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCc
Q psy8358 161 NDSGLIEPILNTVSLHQIKKNSQ--------VSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGN 232 (424)
Q Consensus 161 ~~~GlIE~v~~~~tl~~i~~~~~--------~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~N 232 (424)
+++|+||||+|+.|+++|++... ..+.+||.+.+ ++++.|.+|++||++|||||||+|||||||||||||
T Consensus 146 ~~~GlIE~V~ns~tl~~I~~~~~~~~~~~k~~~l~~~l~~~~--~~~~~~~~a~~nFi~S~AgYsV~tYiLGIgDRHndN 223 (365)
T cd00894 146 DKIGMIEIVKDATTIAKIQQSTVGNTGAFKDEVLSHWLKEKC--PIEEKFQAAVERFVYSCAGYCVATFVLGIGDRHNDN 223 (365)
T ss_pred CCceEEEEcCCchhHHHHHHhcccccccccchhHHHHHHHhC--CCHHHHHHHHHHHHHHhHHHHHHHHhccccCccccc
Confidence 99999999999999999987642 35889998875 456789999999999999999999999999999999
Q ss_pred eEEecCCcEEEEeccccccCCCCCC--CCCCCCccccHHHHHHhCCC-----cchhhHHHHHHHHHHHHhcChhHHHHHH
Q psy8358 233 ILLSGEGHLIHIDFGFILSLSPRNL--GFETSPFKLTLEVVEVFGGV-----DMFCYFKILMLQGLIAARKHMDKILSLV 305 (424)
Q Consensus 233 Ili~~~G~~~HIDFg~~fg~~~~~~--~~E~vPFrLT~~~~~~mg~~-----~~~~~f~~~~~~~~~~LR~~~~~i~~ll 305 (424)
|||+++||+|||||||+||++|++. .||+||||||++|+++||+. +.|+.|+.+|++||.+||+|++.|++++
T Consensus 224 Imi~~~G~lfHIDFG~ilg~~~~~~gi~~E~~PFkLT~e~v~vmg~~gg~~s~~f~~F~~~c~~a~~~LRk~~~lil~L~ 303 (365)
T cd00894 224 IMITETGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSLHFQKFQDVCVKAYLALRHHTNLLIILF 303 (365)
T ss_pred eeEcCCCCEEEEeeHHhhCCCCccCCCCCCCCCeeecHHHHHHhCccCCcCChhHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 9999999999999999999998654 57999999999999999843 4678999999999999999999999999
Q ss_pred HHHhcCCCCcccccchhhHHhhhhhcccCccHHHHHHHHHHHHHHhhhcccchhhhhhHHH
Q psy8358 306 EIMRSGSQLPCFKSGAATVQNLKNRFHMNLTEEQLQVLIDKLVDSSIHSLSTKLYDGFQYY 366 (424)
Q Consensus 306 ~~~~~~~~lp~~~~~~~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~~~~~t~~~d~~Q~~ 366 (424)
++|+. +++||++ +.++++++++||++++||++|.+++.++|++|+++++|..+|++...
T Consensus 304 ~lM~~-sgip~l~-~~~~i~~l~~~~~l~~se~eA~~~f~~~I~~s~~~~~~~~~n~~~h~ 362 (365)
T cd00894 304 SMMLM-TGMPQLT-SKEDIEYIRDALTVGKSEEDAKKHFLDQIEVCRDKGWTVQFNWFLHL 362 (365)
T ss_pred HHHhc-CCCcccC-cchHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcCCeeeeHHHHHH
Confidence 99996 8999998 55789999999999999999999999999999987555555555443
No 7
>cd05165 PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. In vitro, they can also phosphorylate the substrates P
Probab=100.00 E-value=2.6e-85 Score=654.23 Aligned_cols=339 Identities=29% Similarity=0.425 Sum_probs=300.1
Q ss_pred ccchhHHHHHHHHHHHHHHHhccC----ChHHHHHHHHHHHhhh-ccCCCCceecCCCCCCCceEEeecCCcceeccCCC
Q psy8358 7 PRLSPQLEFIRVLINMSKTLASLR----SKEAKTSRLLADLTTL-NHNLPARVWLPLYSDQPHHIVRIPPSAAAVLNSKD 81 (424)
Q Consensus 7 ~~l~~q~~~~~~l~~i~~~~~~~~----~~~~r~~~l~~~l~~~-~~~lp~~~~lP~~~~~~~~i~~i~~~~~~v~~S~~ 81 (424)
..|.+|+++++.|.+|+.++|... ++++|.+.|++.|+.. +.++|..+++|++| ++.|.+|.+++|+||+|++
T Consensus 2 ~~l~~Q~~~~~~l~~~~~~ik~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~lPl~P--~~~v~~i~~~~~~v~~Sk~ 79 (366)
T cd05165 2 KDLSKQVEALNKLKKLTDIIKSLSAKYDVKEQVKSQLEQVLRQLANLDLLQSFQSPLNP--SLKLGELRIEKCKVMDSKK 79 (366)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHcccchhcccccCCCCCCC--ceeEeeeecCceEEehhhc
Confidence 468999999999999999999854 4567788888888764 34567889999987 8999999999999999995
Q ss_pred CCcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceEEEecC
Q psy8358 82 KAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCLSN 161 (424)
Q Consensus 82 k~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~~ 161 (424)
.|.++.|... .+ +. -+|+.|.+|||+|||||||+++||+|++||.+|+++++|++++||+|+|||+
T Consensus 80 -~P~~l~f~~~-----------d~-~~-~~g~~~~~IfK~gDDLRQD~l~lQli~lm~~i~~~~~ldL~l~pY~vl~t~~ 145 (366)
T cd05165 80 -KPLWLVFENA-----------DP-TA-LSNENVGIIFKNGDDLRQDMLTLQILRIMDSIWKEEGLDLRMLPYGCLSTGD 145 (366)
T ss_pred -CCcEEEEEcc-----------Cc-cc-ccCCceeEEEecCCcccHHHHHHHHHHHHHHHHHhCCCCceeEEEEEEEecC
Confidence 5999988621 00 00 1356799999999999999999999999999999999999999999999999
Q ss_pred CCceeeeeCCcccHHHHHhhcc---------ccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCc
Q psy8358 162 DSGLIEPILNTVSLHQIKKNSQ---------VSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGN 232 (424)
Q Consensus 162 ~~GlIE~v~~~~tl~~i~~~~~---------~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~N 232 (424)
++|+||||+|+.|+++|++... ..+.+|+.+.+ ++++.|.+|++||++|||||||+|||||||||||||
T Consensus 146 ~~GlIE~V~ns~tl~~I~~~~~~~~~~~f~~~~l~~wl~~~~--~~~~~~~~a~~nF~~S~AgysvvtYiLGigDRH~~N 223 (366)
T cd05165 146 KIGLIEVVRDSTTIANIQQETGGNATAAFKKEALLHWLKEKN--PTEEKLDAAIEEFTLSCAGYCVATFVLGIGDRHNDN 223 (366)
T ss_pred CceEEEEeCCchhHHHHHHhcccccccccCcHHHHHHHHhhC--CCHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcc
Confidence 9999999999999999987753 25889998765 346789999999999999999999999999999999
Q ss_pred eEEecCCcEEEEeccccccCCCCCC--CCCCCCccccHHHHHHhCCC------cchhhHHHHHHHHHHHHhcChhHHHHH
Q psy8358 233 ILLSGEGHLIHIDFGFILSLSPRNL--GFETSPFKLTLEVVEVFGGV------DMFCYFKILMLQGLIAARKHMDKILSL 304 (424)
Q Consensus 233 Ili~~~G~~~HIDFg~~fg~~~~~~--~~E~vPFrLT~~~~~~mg~~------~~~~~f~~~~~~~~~~LR~~~~~i~~l 304 (424)
|||+++||+|||||||+||++|+.+ .||+||||||++|+++||+. +.|+.|+.+|+.||.+||+|++.|+++
T Consensus 224 ILi~~~G~l~HIDFG~ilg~~~~~~~i~~E~~PFkLT~emv~~mg~~~~~~~s~~f~~F~~~c~~a~~~LR~~~~~il~l 303 (366)
T cd05165 224 IMVKETGQLFHIDFGHILGNYKSKFGINRERVPFVLTPDFVHVIGRGKKDNTSEHFQRFQDLCEKAYLALRRHGNLLIIL 303 (366)
T ss_pred eEEcCCCCEEEEehHHhhccCCccCCCCCCCCCeeecHHHHHHhcccCCcCCChhhhHHHHHHHHHHHHHHhCHHHHHHH
Confidence 9999999999999999999998765 47999999999999999853 467999999999999999999999999
Q ss_pred HHHHhcCCCCcccccchhhHHhhhhhcccCccHHHHHHHHHHHHHHhhh-cccchhhhhhHH
Q psy8358 305 VEIMRSGSQLPCFKSGAATVQNLKNRFHMNLTEEQLQVLIDKLVDSSIH-SLSTKLYDGFQY 365 (424)
Q Consensus 305 l~~~~~~~~lp~~~~~~~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~~-~~~t~~~d~~Q~ 365 (424)
+++|+. +++||++ +..+++++++||++++||++|.++|.++|++|++ +|+|++...++.
T Consensus 304 ~~lM~~-s~ip~~~-~~~~i~~lr~rf~l~~se~eA~~~f~~~I~~s~~~~~~t~~~~~~H~ 363 (366)
T cd05165 304 FSMMLM-SGLPELT-SKEDIEYLRDTLALGKSEEEALKYFLDKFNEALDGSWTTKFNWFSHL 363 (366)
T ss_pred HHHHhc-CCCcccC-chhHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcCceeeeHHHHHH
Confidence 999995 7999998 5678999999999999999999999999999997 788866554443
No 8
>cd05166 PI3Kc_II Phosphoinositide 3-kinase (PI3K), class II, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do not associate with any
Probab=100.00 E-value=1.1e-84 Score=649.74 Aligned_cols=337 Identities=25% Similarity=0.394 Sum_probs=305.7
Q ss_pred ccchhHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHhhhcc-CCCCceecCCCCCCCceEEeecCCcceeccCCCCCcE
Q psy8358 7 PRLSPQLEFIRVLINMSKTLASLRSKEAKTSRLLADLTTLNH-NLPARVWLPLYSDQPHHIVRIPPSAAAVLNSKDKAPY 85 (424)
Q Consensus 7 ~~l~~q~~~~~~l~~i~~~~~~~~~~~~r~~~l~~~l~~~~~-~lp~~~~lP~~~~~~~~i~~i~~~~~~v~~S~~k~p~ 85 (424)
.+|.+|+++++.|.+|+..+|+.+ +++|++.|+++|+.+.. .+|..+++|++| ++.|.+|.+++|+||+|++ .|.
T Consensus 2 ~~l~~q~~~~~~l~~i~~~vk~~~-~~~~~~~l~~~l~~~~~~~~~~~~~lP~~p--~~~~~~i~~~~~~v~~S~~-~P~ 77 (353)
T cd05166 2 EEFKKQHKLVNKLGSIAEDVKSAS-ESARQHVLRTGLGRVDSFLLQNKCRLPLNP--ALDVKGIDVRECSYFNSNA-LPL 77 (353)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHhhhhhccCCCCccCCCC--ceEEEeEEcCceEEecccc-Cce
Confidence 368999999999999999999975 56788999999988743 356679999987 7999999999999999996 589
Q ss_pred EEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceEEEecCCCce
Q psy8358 86 IIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCLSNDSGL 165 (424)
Q Consensus 86 ~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~~~~Gl 165 (424)
++.|.. ..+.|+.|.+|||+|||||||+++||++++||++|+++++|++++||+|+|||+++|+
T Consensus 78 ~l~f~~----------------~d~~g~~~~~i~K~gDDLRQD~l~~Qli~lm~~i~~~~~ldL~l~~Y~vip~~~~~Gl 141 (353)
T cd05166 78 KISFVN----------------ADPMGENISVIFKAGDDLRQDMLVLQMINIMDKIWLQEGLDLRMITFRCLSTGYDRGM 141 (353)
T ss_pred EEEEEe----------------cCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHHHHHhCCCCceeEEEEEEEcCCCcce
Confidence 988852 1123678999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCcccHHHHHhhcc-------ccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEecC
Q psy8358 166 IEPILNTVSLHQIKKNSQ-------VSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSGE 238 (424)
Q Consensus 166 IE~v~~~~tl~~i~~~~~-------~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~~ 238 (424)
||||+|+.|+++|++..+ ..+.+||.+.+ +++..|.+|++||++|||||||+||||||||||+|||||+++
T Consensus 142 IE~V~ns~tl~~I~~~~g~~~~~~~~~l~~~l~~~~--~~~~~~~~a~~nF~~S~A~ysvv~YiLgigDRH~~NILl~~~ 219 (353)
T cd05166 142 VELVPDAETLRKIQVEEGLTGSFKDRPIAKWLMKHN--PSELEYEKAVENFIYSCAGCCVATYVLGICDRHNDNIMLTKS 219 (353)
T ss_pred EEEeCCchhHHHHHHHhCccccccchhHHHHHHHhC--CChHHHHHHHHHHHhHHHHHHHHHHHhhccccCCCceEECCC
Confidence 999999999999988753 36889998765 456789999999999999999999999999999999999999
Q ss_pred CcEEEEeccccccCCCCC--CCCCCCCccccHHHHHHhCCC----cchhhHHHHHHHHHHHHhcChhHHHHHHHHHhcCC
Q psy8358 239 GHLIHIDFGFILSLSPRN--LGFETSPFKLTLEVVEVFGGV----DMFCYFKILMLQGLIAARKHMDKILSLVEIMRSGS 312 (424)
Q Consensus 239 G~~~HIDFg~~fg~~~~~--~~~E~vPFrLT~~~~~~mg~~----~~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~~ 312 (424)
||+|||||||+||+++.+ +.||+||||||++|+++||+. +.|+.|+.+|+.||.+||+|++.|++++++|+. +
T Consensus 220 G~l~HIDFG~~lg~~~~~~~~~~E~~PFrLT~emv~~~ggg~~~s~~~~~F~~~c~~~~~~lRk~~~~il~ll~~ml~-s 298 (353)
T cd05166 220 GHMFHIDFGKFLGHAQMFGGFKRDRAPFVFTSDMAYVINGGDKPTQRFQDFVDLCCRAYNIIRKHANLLLNLLRMMAC-S 298 (353)
T ss_pred CCEEEEeeHHhcccccccccCCCCCCCccccHHHHHHhcCCCCCcchHhHHHHHHHHHHHHHHcChHHHHHHHHHHhc-C
Confidence 999999999999998844 457999999999999999854 568999999999999999999999999999996 6
Q ss_pred CCcccccchhhHHhhhhhcccCccHHHHHHHHHHHHHHhhhcccchhhhhhHHHh
Q psy8358 313 QLPCFKSGAATVQNLKNRFHMNLTEEQLQVLIDKLVDSSIHSLSTKLYDGFQYYT 367 (424)
Q Consensus 313 ~lp~~~~~~~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~~~~~t~~~d~~Q~~~ 367 (424)
++||++ +.++++++++||++++||++|..++.++|++|+++|+|+++|.++.+.
T Consensus 299 ~lp~~~-~~~~i~~l~~r~~l~~s~~ea~~~~~~~I~~s~~s~~t~~~~~~H~~a 352 (353)
T cd05166 299 GLPELS-KIQDLKYVRDALRPQLTDAEATIQFTKMIQSSLGSAFTKLNFFIHNLA 352 (353)
T ss_pred CCcccC-chhHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhc
Confidence 899998 567899999999999999999999999999999999999999887653
No 9
>cd05173 PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), class IA, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and de
Probab=100.00 E-value=6.1e-84 Score=643.54 Aligned_cols=336 Identities=26% Similarity=0.386 Sum_probs=297.1
Q ss_pred ccchhHHHHHHHHHHHHHHHhccC---ChHHHHHHHHHHHhhhc-cCCCCceecCCCCCCCceEEeecCCcceeccCCCC
Q psy8358 7 PRLSPQLEFIRVLINMSKTLASLR---SKEAKTSRLLADLTTLN-HNLPARVWLPLYSDQPHHIVRIPPSAAAVLNSKDK 82 (424)
Q Consensus 7 ~~l~~q~~~~~~l~~i~~~~~~~~---~~~~r~~~l~~~l~~~~-~~lp~~~~lP~~~~~~~~i~~i~~~~~~v~~S~~k 82 (424)
..|.+|+++++.|.+++..++... ++++|++.|+..|++.. .++-.++++|++| ++.|.+|.+++|+||+|+++
T Consensus 2 ~~l~~Q~~~~~~l~~~~~~~k~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~lPldP--~~~v~~i~~~~~~v~~S~~~ 79 (362)
T cd05173 2 KVLSKQVEALNKLKTLNSLIKLNAVKLSKAKGKEAMHTCLRQSAYREALSDLQSPLNP--SIILSELNVEKCKYMDSKMK 79 (362)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhcccchhcccCCCCCCCC--ceEEEEEEcCceEEecccCC
Confidence 468999999999999999999753 46677888998887642 2222468899987 89999999999999999966
Q ss_pred CcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceEEEecCC
Q psy8358 83 APYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCLSND 162 (424)
Q Consensus 83 ~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~~~ 162 (424)
|.++.|.+ ..++|..|.+|||+|||||||+++||++++||++|+++++|++++||+|+|||++
T Consensus 80 -Pl~l~f~~----------------~~~~g~~~~~IfK~gDDLRQD~l~lQli~lm~~i~k~~~ldL~l~pY~vi~t~~~ 142 (362)
T cd05173 80 -PLWIVYNN----------------KLFGGDSLGIIFKNGDDLRQDMLTLQILRLMDTLWKEAGLDLRIVPYGCLATGDR 142 (362)
T ss_pred -CeEEEEee----------------cCCCCCEEEEEEeCCCchhHHHHHHHHHHHHHHHHHHCCCCeeeEEEEEEEccCC
Confidence 88888852 1134568999999999999999999999999999999999999999999999999
Q ss_pred CceeeeeCCcccHHHHHhhc----------cccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCc
Q psy8358 163 SGLIEPILNTVSLHQIKKNS----------QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGN 232 (424)
Q Consensus 163 ~GlIE~v~~~~tl~~i~~~~----------~~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~N 232 (424)
+|+||||+|+.|+++|+... +.++.+|+.+.. +.+.|.+|++||++|||||||+|||||||||||||
T Consensus 143 ~GlIE~V~ns~tl~~I~~~~~~~~~~~~f~~~~l~~~l~~~~---~~~~~~~a~~nF~~S~AgYsvvtYILGIGDRHn~N 219 (362)
T cd05173 143 SGLIEVVSSAETIADIQLNSSNVAAAAAFNKDALLNWLKEYN---SGDDLERAIEEFTLSCAGYCVATYVLGIGDRHSDN 219 (362)
T ss_pred ceEEEEeCCchhHHHHHHhccccchhcccChhHHHHHHHhcC---CcHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCc
Confidence 99999999999999998543 246889997643 23568889999999999999999999999999999
Q ss_pred eEEecCCcEEEEeccccccCCCCCC--CCCCCCccccHHHHHHhC-CC----cchhhHHHHHHHHHHHHhcChhHHHHHH
Q psy8358 233 ILLSGEGHLIHIDFGFILSLSPRNL--GFETSPFKLTLEVVEVFG-GV----DMFCYFKILMLQGLIAARKHMDKILSLV 305 (424)
Q Consensus 233 Ili~~~G~~~HIDFg~~fg~~~~~~--~~E~vPFrLT~~~~~~mg-~~----~~~~~f~~~~~~~~~~LR~~~~~i~~ll 305 (424)
|||+++||+|||||||+||+.|+.+ .||+||||||++|+++|| |. +.|+.|+.+|+.||.+||+|++.|++++
T Consensus 220 ILi~~~G~l~HIDFG~ilg~~~~~~~~~~E~vPFkLT~emv~vm~~G~~g~s~~~~~F~~~c~~a~~~LRk~~~lil~l~ 299 (362)
T cd05173 220 IMVRKNGQLFHIDFGHILGNFKSKFGIKRERVPFILTYDFIHVIQQGKTGNTEKFGRFRQYCEDAYLILRKNGNLFITLF 299 (362)
T ss_pred eEECCCCCEEEEehHHhhccCCcccCCCCCCCCeeecHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 9999999999999999999987554 479999999999999996 32 4699999999999999999999999999
Q ss_pred HHHhcCCCCcccccchhhHHhhhhhcccCccHHHHHHHHHHHHHHhh-hcccchhhhhhHHH
Q psy8358 306 EIMRSGSQLPCFKSGAATVQNLKNRFHMNLTEEQLQVLIDKLVDSSI-HSLSTKLYDGFQYY 366 (424)
Q Consensus 306 ~~~~~~~~lp~~~~~~~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~-~~~~t~~~d~~Q~~ 366 (424)
++|+. +++||+. +..+++++++||++++||+||..++.++|++|+ ++|+|+++..++.+
T Consensus 300 ~lM~~-s~ip~~~-~~~~i~~l~~r~~l~~se~eA~~~f~~~i~~s~~~~~~t~~n~~~H~~ 359 (362)
T cd05173 300 ALMLT-AGLPELT-SVKDIQYLKDSLALGKSEEEALKQFRQKFDEALRESWTTKVNWMAHTV 359 (362)
T ss_pred HHHhc-CCCcccc-chhHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhcchhhhHHHHHHh
Confidence 99996 7899998 567899999999999999999999999999999 58999987776654
No 10
>cd05174 PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), class IA, delta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and
Probab=100.00 E-value=2.5e-83 Score=637.35 Aligned_cols=336 Identities=25% Similarity=0.357 Sum_probs=294.2
Q ss_pred ccchhHHHHHHHHHHHHHHHhccC---ChHHHHHHHHHHHhhhc-cCCCCceecCCCCCCCceEEeecCCcceeccCCCC
Q psy8358 7 PRLSPQLEFIRVLINMSKTLASLR---SKEAKTSRLLADLTTLN-HNLPARVWLPLYSDQPHHIVRIPPSAAAVLNSKDK 82 (424)
Q Consensus 7 ~~l~~q~~~~~~l~~i~~~~~~~~---~~~~r~~~l~~~l~~~~-~~lp~~~~lP~~~~~~~~i~~i~~~~~~v~~S~~k 82 (424)
..|.+|.+++++|.+|++.+|... +++.+.+.|++.|++.. .+....+.+|++| ++.+.++.+++|+||+|+++
T Consensus 2 ~~l~~q~~~~~~l~~~~~~~k~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lPl~p--~~~~~~~~~~~~~v~~Sk~~ 79 (361)
T cd05174 2 KVLMKQGEALSKMKALNDFVKLSSQKATKPQTKEDMHVCMKQETYLEALSHLQSPLSP--SIILCEVCVDQCTFMDSKMK 79 (361)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHhcCchhhhhhccCCCCCCC--ceEEEEEEcCcEEEEeccCC
Confidence 478999999999999999999752 34555677777776542 1223457888877 89999999999999999966
Q ss_pred CcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceEEEecCC
Q psy8358 83 APYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCLSND 162 (424)
Q Consensus 83 ~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~~~ 162 (424)
|.++.|.+ ..++|+.|.+|||+|||||||+++||+|++||.+|++++++++++||+|+|+|++
T Consensus 80 -Pl~l~f~~----------------~~~~g~~~~~IfK~gDDLRQD~l~~Qli~lmd~i~k~~~ldL~l~pY~vi~tg~~ 142 (361)
T cd05174 80 -PLWIMYKN----------------EEAGGGSVGIIFKNGDDLRQDMLTLQMIQLMDVLWKQEGLDLRMTPYGCLSTGDK 142 (361)
T ss_pred -ceEEEEee----------------cCCCCCEEEEEEeCCCchhHHHHHHHHHHHHHHHHHHCCCCeeeEEEEEEEecCC
Confidence 88888862 1134678999999999999999999999999999999999999999999999999
Q ss_pred CceeeeeCCcccHHHHHhhcc----------ccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCc
Q psy8358 163 SGLIEPILNTVSLHQIKKNSQ----------VSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGN 232 (424)
Q Consensus 163 ~GlIE~v~~~~tl~~i~~~~~----------~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~N 232 (424)
+|+||||+|+.|+++|++... ..+.+|+.+.++ + +.|.+|++||++|||||||+|||||||||||||
T Consensus 143 ~GlIE~V~ns~Tl~~I~~~~~~~~~~~~f~~~~l~~~l~~~~~--~-~~~~~A~~nF~~S~AgysVvtYiLGIGDRHn~N 219 (361)
T cd05174 143 TGLIEVVKNSDTIANIQLNKSNMAATAAFNKDALLNWLKSKNP--G-DALDQAIEEFTLSCAGYCVATYVLGIGDRHSDN 219 (361)
T ss_pred ceEEEEeCCchhHHHHHHhhcccchhccccchHHHHHHHhcCC--c-HHHHHHHHHHHHHHHHHHHHHHHhcccCcCccc
Confidence 999999999999999986532 368899987653 2 467889999999999999999999999999999
Q ss_pred eEEecCCcEEEEeccccccCCCCCC--CCCCCCccccHHHHHHhCC--C---cchhhHHHHHHHHHHHHhcChhHHHHHH
Q psy8358 233 ILLSGEGHLIHIDFGFILSLSPRNL--GFETSPFKLTLEVVEVFGG--V---DMFCYFKILMLQGLIAARKHMDKILSLV 305 (424)
Q Consensus 233 Ili~~~G~~~HIDFg~~fg~~~~~~--~~E~vPFrLT~~~~~~mg~--~---~~~~~f~~~~~~~~~~LR~~~~~i~~ll 305 (424)
|||+++||+|||||||+||+.|+.. .||+||||||++|+++||+ . +.|+.|+.+|+.||.+||+|++.|++++
T Consensus 220 ILi~~~G~l~HIDFG~ilg~~~~~~~~~~E~vPFkLT~e~v~vmg~G~~~~s~~f~~F~~~c~~a~~~LRk~~~~il~l~ 299 (361)
T cd05174 220 IMIRESGQLFHIDFGHFLGNFKTKFGINRERVPFILTYDFVHVIQQGKTNNSEKFERFRGYCEQAYKILRRHGTLFLHLF 299 (361)
T ss_pred eeEcCCCCEEEEehHHhhcCCcccCCCCCCCCCeeccHHHHHHHccCCCCCCchhhHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 9999999999999999999988655 5799999999999999962 2 5689999999999999999999999999
Q ss_pred HHHhcCCCCcccccchhhHHhhhhhcccCccHHHHHHHHHHHHHHhh-hcccchhhhhhHHH
Q psy8358 306 EIMRSGSQLPCFKSGAATVQNLKNRFHMNLTEEQLQVLIDKLVDSSI-HSLSTKLYDGFQYY 366 (424)
Q Consensus 306 ~~~~~~~~lp~~~~~~~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~-~~~~t~~~d~~Q~~ 366 (424)
++|+. +++||+. ...+++++++||++++||+||..++.++|++|+ ++|+|+++..++.+
T Consensus 300 ~lM~~-sgip~~~-~~~~i~~l~~~~~l~~se~ea~~~f~~~i~~s~~~~~~~~~n~~~H~~ 359 (361)
T cd05174 300 ALMKA-AGLPELN-CSKDIQYLKDSLALGKTEEEALKHFRVKFNEALRESWKTKVNWLAHNV 359 (361)
T ss_pred HHHhc-CCCCccC-chhHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCchhhhHHHHHhh
Confidence 99985 8999998 457899999999999999999999999999999 68999987766543
No 11
>cd05175 PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), class IA, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and
Probab=100.00 E-value=1.5e-83 Score=637.37 Aligned_cols=338 Identities=26% Similarity=0.432 Sum_probs=289.9
Q ss_pred ccchhHHHHHHHHHHHHHHHhccCChHHH---HHHHHHHHhhhc-cCCCCceecCCCCCCCceEEeecCCcceeccCCCC
Q psy8358 7 PRLSPQLEFIRVLINMSKTLASLRSKEAK---TSRLLADLTTLN-HNLPARVWLPLYSDQPHHIVRIPPSAAAVLNSKDK 82 (424)
Q Consensus 7 ~~l~~q~~~~~~l~~i~~~~~~~~~~~~r---~~~l~~~l~~~~-~~lp~~~~lP~~~~~~~~i~~i~~~~~~v~~S~~k 82 (424)
+.|.+|+++++.|.+|+..+|....+..+ .+.+++.|+..+ .....++++|++| ++.+.+|.+++|+||+|+ +
T Consensus 2 ~~l~~Q~~~~~~L~~~~~~ik~~~~~~~~k~~~~~l~~~l~~~~~~~~~~~~~lPl~P--~~~~~~i~~e~c~v~~S~-~ 78 (366)
T cd05175 2 KHLSRQVEAMEKLINLTDILKQEKKDETQKVQMKFLVEQMRRPDFMDALQGFTSPLNP--AHQLGNLRLEECRIMSSA-K 78 (366)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHhcCchhhhccCCCCCCCCC--ceEEEEEEeccceeechh-c
Confidence 46899999999999999999975422222 345666665532 1223468999987 899999999999999999 5
Q ss_pred CcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceEEEecCC
Q psy8358 83 APYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCLSND 162 (424)
Q Consensus 83 ~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~~~ 162 (424)
.|.++.|++. .+.+. .....|.+|||+|||||||+++||+|++||++|+++++||+++||+|+|||++
T Consensus 79 ~Pl~l~f~~~-----------d~~~~-~~~~~~~~IfK~GDDLRQD~l~lQli~lmd~i~~~~~ldL~l~pY~vl~tg~~ 146 (366)
T cd05175 79 RPLWLNWENP-----------DIMSE-LLFQNNEIIFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDC 146 (366)
T ss_pred CCeEEEEEcC-----------Ccccc-cccCCcceEEeCCCCccHHHHHHHHHHHHHHHHHHCCCCeEEEEEEEEEecCC
Confidence 6999998731 11111 11235889999999999999999999999999999999999999999999999
Q ss_pred CceeeeeCCcccHHHHHhhc---------cccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCce
Q psy8358 163 SGLIEPILNTVSLHQIKKNS---------QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNI 233 (424)
Q Consensus 163 ~GlIE~v~~~~tl~~i~~~~---------~~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NI 233 (424)
+|+||||+|+.|+++|.+.. ..++.+|+.+.++ .+.|.+|++||++|||||||+||||||||||||||
T Consensus 147 ~GlIE~V~ns~tl~~I~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~a~~nF~~S~AgYsV~tYiLGIgDRHndNI 223 (366)
T cd05175 147 VGLIEVVRNSHTIMQIQCKGGLKGALQFNSHTLHQWLKDKNK---GEMYDAAIDLFTRSCAGYCVATFILGIGDRHNSNI 223 (366)
T ss_pred ceEEEEcCCchhHHHHHhccccccccccCchhHHHHHhhcCC---cHHHHHHHHHHHHHHHHHHHHHHHhcccccCccce
Confidence 99999999999999998753 2468899887542 35799999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccccccCCCCCCC--CCCCCccccHHHHHHhCCC-------cchhhHHHHHHHHHHHHhcChhHHHHH
Q psy8358 234 LLSGEGHLIHIDFGFILSLSPRNLG--FETSPFKLTLEVVEVFGGV-------DMFCYFKILMLQGLIAARKHMDKILSL 304 (424)
Q Consensus 234 li~~~G~~~HIDFg~~fg~~~~~~~--~E~vPFrLT~~~~~~mg~~-------~~~~~f~~~~~~~~~~LR~~~~~i~~l 304 (424)
||+++||+|||||||+||++|++++ ||++|||||++|+++|||. +.|+.|+.+|++||.+||+|++.|+++
T Consensus 224 mi~~~G~l~HIDFG~iLg~~p~~~~~~~E~~PFkLT~emv~v~~gg~~~~~~s~~f~~F~~lc~~ay~~lRk~~~~ii~L 303 (366)
T cd05175 224 MVKDDGQLFHIDFGHFLDHKKKKFGYKRERVPFVLTQDFLIVISKGAQECTKTREFERFQEMCYKAYLAIRQHANLFINL 303 (366)
T ss_pred eEcCCCCEEEEehHHhhcCCCccCCCCCCCCCeEecHHHHHHhccCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997654 6999999999999999742 468999999999999999999999999
Q ss_pred HHHHhcCCCCcccccchhhHHhhhhhcccCccHHHHHHHHHHHHHHhhh-cccchhhhhhH
Q psy8358 305 VEIMRSGSQLPCFKSGAATVQNLKNRFHMNLTEEQLQVLIDKLVDSSIH-SLSTKLYDGFQ 364 (424)
Q Consensus 305 l~~~~~~~~lp~~~~~~~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~~-~~~t~~~d~~Q 364 (424)
+++|+. +++||++ +..+++++++||++++||+||..++.++|++|++ +|+|++...++
T Consensus 304 ~~lM~~-sgiP~l~-~~~~i~~lr~rf~l~~sd~eA~~~f~~~I~~s~~~~w~t~~n~~~H 362 (366)
T cd05175 304 FSMMLG-SGMPELQ-SFDDIAYIRKTLALDKTEQEALEYFMKQMNDAHHGGWTTKMDWIFH 362 (366)
T ss_pred HHHHhc-CCCcccC-CccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHhcCceeeehHHHH
Confidence 999984 8999998 5578999999999999999999999999999886 79999544444
No 12
>cd05168 PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. PI4KIIIbeta (also called Pik1p in yeast) is a 110 kDa protein that is localized to the Golgi and the nucleus. It is required for maintaining the structural integrity of the Golgi complex (GC), and is a key regulator of protein transport from the GC to the plasma membrane. PI4KII
Probab=100.00 E-value=5.1e-84 Score=630.17 Aligned_cols=283 Identities=58% Similarity=0.992 Sum_probs=271.4
Q ss_pred EEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceEEEecCCCcee
Q psy8358 87 IYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCLSNDSGLI 166 (424)
Q Consensus 87 ~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~~~~GlI 166 (424)
..|.|.|.+|.+|+|..||||+.++|+.+.+|+|+|||||||+++||++++||.+|++++++++++||+|+|+|+++|+|
T Consensus 5 ~~~~e~~~~~~~r~r~~s~~~~~~~~~~~~~i~K~gDDLRqD~l~~Ql~~~~~~i~~~~~l~l~l~~Y~vip~~~~~GlI 84 (293)
T cd05168 5 APFGEDWEEKKERIRKSSPYGHLKSWDLRSVIVKTGDDLRQELLAMQLIQQFDRIFKEEGLPLWLRPYEILVTSSNSGLI 84 (293)
T ss_pred cccCCCHHHHHHHhhhcCccCcCCCCCEEEEEEeCCCCccHHHHHHHHHHHHHHHHHHCCCCceeeeEEEEEccCCceeE
Confidence 34788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCCcccHHHHHhhc---cccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEecCCcEEE
Q psy8358 167 EPILNTVSLHQIKKNS---QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSGEGHLIH 243 (424)
Q Consensus 167 E~v~~~~tl~~i~~~~---~~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~~G~~~H 243 (424)
|||+|+.|+++|+++. ..+|.+||.+.++++ ++.|.++++||++|||+|||+||||||||||++||||+++||+||
T Consensus 85 E~V~ns~tl~~i~k~~~~~~~~l~~~f~~~~~~~-~~~~~~a~~nF~~S~A~ySvv~YvLGigDRH~~NILi~~~G~liH 163 (293)
T cd05168 85 ETIPDTVSIDSLKKKLTSKFKSLLDFFKKTFGDP-SERFREAQKNFIESLAGYSLICYLLQIKDRHNGNILIDNDGHIIH 163 (293)
T ss_pred EEeCCchhHHHHHHHhccCCchHHHHHHHHcCCC-cHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCceEEcCCCCEEE
Confidence 9999999999999886 468999999998765 578999999999999999999999999999999999999999999
Q ss_pred EeccccccCCCCCCCCCCCCccccHHHHHHhCCCc--chhhHHHHHHHHHHHHhcChhHHHHHHHHHhcCCCCcccccch
Q psy8358 244 IDFGFILSLSPRNLGFETSPFKLTLEVVEVFGGVD--MFCYFKILMLQGLIAARKHMDKILSLVEIMRSGSQLPCFKSGA 321 (424)
Q Consensus 244 IDFg~~fg~~~~~~~~E~vPFrLT~~~~~~mg~~~--~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~~~lp~~~~~~ 321 (424)
||||++||.+|+...||+||||||++|+++|||.+ .|+.|+.+|+.+|.+||+|++.|++++++|+.+|++||++.+.
T Consensus 164 IDFG~~fg~~~~~~~~E~vPFrLT~~mv~~mGg~~s~~~~~F~~~c~~~~~~LR~~~~~il~ll~~m~~~~~lp~f~~~~ 243 (293)
T cd05168 164 IDFGFMLSNSPGNVGFETAPFKLTQEYIEVMGGVNSDLFNYFKKLFLKGFMALRKHVDRIILLVEIMQSDSKLPCFKAGE 243 (293)
T ss_pred EehHHhhcccccCCCCCCCCEEecHHHHHHhCCCCCchhHHHHHHHHHHHHHHHhchHHHHHHHHHHccCCCCccccCch
Confidence 99999999999999999999999999999999975 5799999999999999999999999999999988999998545
Q ss_pred hhHHhhhhhcccCccHHHHHHHHHHHHHHhhhcccchhhhhhHHHhhcc
Q psy8358 322 ATVQNLKNRFHMNLTEEQLQVLIDKLVDSSIHSLSTKLYDGFQYYTNAF 370 (424)
Q Consensus 322 ~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~~~~~t~~~d~~Q~~~nGI 370 (424)
.+++++++||++++||++|..++.++|+.|+++|+|++||.||+++|||
T Consensus 244 ~~i~~l~~r~~l~~se~~a~~~~~~lI~~s~~~~~t~~yD~~q~~~~gi 292 (293)
T cd05168 244 FTIQQLRDRFMLNLTEEQLEVFVDELINQSLDNWRTRLYDKFQYLTNGI 292 (293)
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhchhHHHHHHHHHHhcCC
Confidence 7899999999999999999999999999999999999999999999997
No 13
>cd00896 PI3Kc_III Phosphoinositide 3-kinase (PI3K), class III, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class III PI3Ks, also called Vps34 (vacuolar protein sorting 34), contain an N-terminal lipid binding C2 domain, a PI3K homology domain of unknown function, and a C-termin
Probab=100.00 E-value=5.2e-83 Score=637.66 Aligned_cols=335 Identities=30% Similarity=0.456 Sum_probs=303.3
Q ss_pred ccchhHHHHHHHHHHHHHHHhccC-ChHHHHHHHHHHHhhhcc---CCCCceecCCCCCCCceEEeecCCcceeccCCCC
Q psy8358 7 PRLSPQLEFIRVLINMSKTLASLR-SKEAKTSRLLADLTTLNH---NLPARVWLPLYSDQPHHIVRIPPSAAAVLNSKDK 82 (424)
Q Consensus 7 ~~l~~q~~~~~~l~~i~~~~~~~~-~~~~r~~~l~~~l~~~~~---~lp~~~~lP~~~~~~~~i~~i~~~~~~v~~S~~k 82 (424)
.+|.+|++|+++|++|++.+++.+ ++++|.+.|++.|++... .+|.++++|++| ++.|.+|.+++|+||+|+ +
T Consensus 2 ~~l~~q~~~~~~L~~i~~~~k~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~lP~dp--~~~i~~i~~~~~~v~~S~-~ 78 (350)
T cd00896 2 QTLSRQIEFVDRLRKLLKELRSSKIDRPKKIEKLKQLLSSIEYELLLDFEPIPLPLDP--SIEITGIIPEESSVFKSA-L 78 (350)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHhccccccccCCCCCcCCCCC--CeEEEEEecCceEEeccc-c
Confidence 368999999999999999999865 567888899999987643 467889999987 899999999999999999 5
Q ss_pred CcEEEEecCcchhhhhhhhcCCCCCcCCCc---ceEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceEEEe
Q psy8358 83 APYIIYCEEPWSKKEARIRQSSPYGHIPSW---RLMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCL 159 (424)
Q Consensus 83 ~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~---~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~ 159 (424)
.|.++.|.. .+| +.|.+|+|+|||||||+++||++++||.+|++++++++++||+|+|+
T Consensus 79 ~P~~l~f~~------------------~dg~~~~~~~~i~K~gDDLRqD~l~~Ql~~lm~~il~~~~ldl~l~~Y~Vip~ 140 (350)
T cd00896 79 MPLKLTFKT------------------EKGNEEGEYPVIFKVGDDLRQDQLVIQIISLMDRLLKKENLDLKLTPYKVLAT 140 (350)
T ss_pred CceEEEEEe------------------CCCCCCceEEEEecCCcchhHhHHHHHHHHHHHHHHHhCCCCceeEEEEEEEc
Confidence 699998862 123 67999999999999999999999999999999999999999999999
Q ss_pred cCCCceeeeeCCcccHHHHHhhccccHHHHHHHHhCCCChHH--HHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEec
Q psy8358 160 SNDSGLIEPILNTVSLHQIKKNSQVSLLEYFIQEFGDINSEG--FLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSG 237 (424)
Q Consensus 160 ~~~~GlIE~v~~~~tl~~i~~~~~~~l~~~~~~~~~~~~~~~--~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~ 237 (424)
|+++|+||||+ +.|+++|.+++. .+.+|+.+.++++.... |.++++||++|||||||+||||||||||+|||||++
T Consensus 141 ~~~~GlIE~V~-s~tl~~i~~~~~-~l~~~l~~~~~~~~~~~~~~~~a~~nF~~S~A~ysvv~YiLGigDRH~~NILi~~ 218 (350)
T cd00896 141 SPTDGLVEFIP-SVTLASILKKYG-GILNYLRKLNPDDGGPLGISPEVMDTFVKSCAGYCVITYILGVGDRHLDNLLLTK 218 (350)
T ss_pred CCCCcceEEEe-cccHHHHHHHHH-HHHHHHHHHCCCccccccchHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEcC
Confidence 99999999999 999999998764 49999998876544321 578999999999999999999999999999999999
Q ss_pred CCcEEEEeccccccCCCCCCCCCCCCccccHHHHHHhCCCcc--hhhHHHHHHHHHHHHhcChhHHHHHHHHHhcCCCCc
Q psy8358 238 EGHLIHIDFGFILSLSPRNLGFETSPFKLTLEVVEVFGGVDM--FCYFKILMLQGLIAARKHMDKILSLVEIMRSGSQLP 315 (424)
Q Consensus 238 ~G~~~HIDFg~~fg~~~~~~~~E~vPFrLT~~~~~~mg~~~~--~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~~~lp 315 (424)
+||+|||||||+||++|++ ++||||||++|+++|||.+. |+.|+.+|+.+|.+||+|++.|++++++|+. +++|
T Consensus 219 ~G~~~HIDFG~ilg~~p~~---~~~PFrLT~~mv~~mGg~~s~~~~~F~~~c~~~~~~lR~~~~~il~l~~lm~~-~~ip 294 (350)
T cd00896 219 DGKLFHIDFGYILGRDPKP---FPPPMKLCKEMVEAMGGAQSEGYQEFKSYCCEAYNILRKSANLILNLFSLMVD-ANIP 294 (350)
T ss_pred CCCEEEEEhHHhhCCCCCC---CCCCeeccHHHHHHhCCCCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHHHcC-CCCc
Confidence 9999999999999999874 57999999999999999754 6699999999999999999999999999996 5799
Q ss_pred cccc-chhhHHhhhhhcccCccHHHHHHHHHHHHHHhhhcccchhhhhhHHHhh
Q psy8358 316 CFKS-GAATVQNLKNRFHMNLTEEQLQVLIDKLVDSSIHSLSTKLYDGFQYYTN 368 (424)
Q Consensus 316 ~~~~-~~~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~~~~~t~~~d~~Q~~~n 368 (424)
|+.. +.+++.++++||++++||++|..++.++|++|+++|+|++||.+|.+.+
T Consensus 295 ~~~~~~~~~i~~l~~rf~l~~s~~ea~~~~~~lI~~s~~~~~t~~~d~~h~~aq 348 (350)
T cd00896 295 DIALDPDKAILKVQEKFRLDLSDEEAIKHFQNLINDSVNALFPVVVDRLHAWAQ 348 (350)
T ss_pred ccccCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 9974 3468999999999999999999999999999999999999999998764
No 14
>cd00893 PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. There are two types of PI4Ks, types II and III. Type II PI4Ks lack the characteristic catalytic kinase domain present in PI3Ks and type III PI4Ks, and are excluded from this family. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes.
Probab=100.00 E-value=3.6e-82 Score=616.10 Aligned_cols=278 Identities=48% Similarity=0.785 Sum_probs=260.5
Q ss_pred CcchhhhhhhhcCCCCCcCCCcc-----eEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceEEEecCCCce
Q psy8358 91 EPWSKKEARIRQSSPYGHIPSWR-----LMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCLSNDSGL 165 (424)
Q Consensus 91 ~~~~~k~~~~~~~~~~g~~~~~~-----~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~~~~Gl 165 (424)
++|..|..+++..+|||...+|. .+.+|+|+|||||||+++||++++||++|++++++++++||+|+|+|+++|+
T Consensus 4 ~~~~~k~~~~~~~~P~~~~~~~~~~~~~~~~~i~K~gDDLRqD~l~~Ql~~l~~~i~~~~~l~l~l~~Y~vi~~s~~~Gl 83 (289)
T cd00893 4 IYISPKILQSALKIPYLELKKLTDSTLINSEFIVKCGDDLRQDILATQIITELQKIFELMFLDLWLNPYLVLPVSKTGGI 83 (289)
T ss_pred ccccchHHHHhhcCchhhccCccCCCCeeEEEEEECCCcccHHHHHHHHHHHHHHHHHHcCCCceeEEEEEEECCCCcee
Confidence 34666666666666666666665 8999999999999999999999999999999999999999999999999999
Q ss_pred eeeeCCcccHHHHHhhccccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEecCCcEEEEe
Q psy8358 166 IEPILNTVSLHQIKKNSQVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSGEGHLIHID 245 (424)
Q Consensus 166 IE~v~~~~tl~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~~G~~~HID 245 (424)
||||+|+.|+++|++....++.+||.+.+++++++.|.+||+||++|||||||+|||||||||||+|||||++||+||||
T Consensus 84 IE~V~ns~tl~~i~~~~~~~l~~~~~~~~~~~~~~~~~~a~~nF~~SlA~ySvv~YiLgigDRH~~NILid~~G~liHID 163 (289)
T cd00893 84 IEFIPNSISIHEIKKQQINSLYDYFLELYGSYTTEAFLQARYNFIESMAGYSLLCYLLQIKDRHNGNILLDSDGHIIHID 163 (289)
T ss_pred EEEeCCchhHHHHHHhccccHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCceEECCCCCEEEEe
Confidence 99999999999999988889999999999988889999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCC-CCCCCCCccccHHHHHHhCCC--cchhhHHHHHHHHHHHHhcChhHHHHHHHHHhcCCCCcccccchh
Q psy8358 246 FGFILSLSPRN-LGFETSPFKLTLEVVEVFGGV--DMFCYFKILMLQGLIAARKHMDKILSLVEIMRSGSQLPCFKSGAA 322 (424)
Q Consensus 246 Fg~~fg~~~~~-~~~E~vPFrLT~~~~~~mg~~--~~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~~~lp~~~~~~~ 322 (424)
||++||++|+. +.||++|||||++|+++|||. +.|+.|+.+|+.+|.+||+|++.|++++++|+. +++||++ .+
T Consensus 164 FG~ilg~~p~~~~~~E~~PFrLT~emv~~mGg~~s~~f~~F~~~c~~~~~~lR~~~~~il~ll~~m~~-~~lp~~~--~~ 240 (289)
T cd00893 164 FGFILDSSPGNNLGFEPAAFKFTKEMVDFMGGKKSDDFKKFRYLCLRGFIAVRKHMDLVISLVYLLIF-SGLPCFR--GS 240 (289)
T ss_pred hHHhhCcCCcCCCCCCCCCeeecHHHHHHhCCCCChhHHHHHHHHHHHHHHHhhCHHHHHHHHHHHcc-CCCcccC--HH
Confidence 99999999977 788999999999999999997 457899999999999999999999999999997 5899998 57
Q ss_pred hHHhhhhhcccCccHHHHHHHHHHHHHHhhhcccchhhhhhHHHhhcch
Q psy8358 323 TVQNLKNRFHMNLTEEQLQVLIDKLVDSSIHSLSTKLYDGFQYYTNAFQ 371 (424)
Q Consensus 323 ~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~~~~~t~~~d~~Q~~~nGI~ 371 (424)
++.++++||++++||++|..++.++|++|+++|+|++||.||+++|||.
T Consensus 241 ~i~~l~~r~~l~~s~~~a~~~~~~lI~~s~~~~~t~~yD~~q~~~~gi~ 289 (289)
T cd00893 241 TIKKLKERLCLNMSEKEAINTVMKKIDSSYNSITTKLYDKVQYYQNGII 289 (289)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCC
Confidence 8999999999999999999999999999999999999999999999983
No 15
>KOG0902|consensus
Probab=100.00 E-value=1.9e-77 Score=646.12 Aligned_cols=351 Identities=37% Similarity=0.663 Sum_probs=323.5
Q ss_pred cccchhHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHhhhccCCCCceecCCCCCCCceEEeecCCcceeccCCCCCcE
Q psy8358 6 APRLSPQLEFIRVLINMSKTLASLRSKEAKTSRLLADLTTLNHNLPARVWLPLYSDQPHHIVRIPPSAAAVLNSKDKAPY 85 (424)
Q Consensus 6 ~~~l~~q~~~~~~l~~i~~~~~~~~~~~~r~~~l~~~l~~~~~~lp~~~~lP~~~~~~~~i~~i~~~~~~v~~S~~k~p~ 85 (424)
.+...+|++|++++|+||++|++.+++++|++.+.++|+++. +.+++|||.+| +..|.+|+.+++++|+|++|+|+
T Consensus 1445 ~df~~rEf~ff~~vT~ISg~l~P~~k~~erk~~i~~~l~kik--~~~~~YlPs~P--~~~v~~i~~~Sg~plQS~aK~Pf 1520 (1803)
T KOG0902|consen 1445 RDFYEREFDFFNKVTSISGKLKPYPKGDERKKAILEELSKIK--VQPGCYLPSNP--DAVVLDIDYKSGTPLQSAAKAPF 1520 (1803)
T ss_pred hHHHHHHhHHHHHhhhccceeecCCCcHHHHHHHHHHHHhhc--ccCceecCCCC--CceEEEeecCCCccchhhccCCe
Confidence 345889999999999999999999888999999999999974 45689999998 78999999999999999999999
Q ss_pred EEEecCcchhhhhhhhcCCCCC----cCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceEEEecC
Q psy8358 86 IIYCEEPWSKKEARIRQSSPYG----HIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCLSN 161 (424)
Q Consensus 86 ~~~~~~~~~~k~~~~~~~~~~g----~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~~ 161 (424)
+++|+ .+|+....-.+ ....|+ ..|||.|||+|||++++|+|++|.+||+..|+|+++.||+|+||++
T Consensus 1521 matF~------vkr~~~~g~~~~~k~~~~~WQ--a~IFKvGDDcRQD~LaLQiislf~~if~~~gLd~~lfPYrV~aT~p 1592 (1803)
T KOG0902|consen 1521 MATFK------VKRLEKDGLQCRSKSQKISWQ--AAIFKVGDDCRQDMLALQIISLFKNIFQLVGLDLYLFPYRVVATAP 1592 (1803)
T ss_pred eEEEe------eeeccCCcccccccccchhhh--hhhhhcCchHHHHHHHHHHHHHHHHHHHHcCCceEEeeeeeeccCC
Confidence 99996 11111100000 012333 6899999999999999999999999999999999999999999999
Q ss_pred CCceeeeeCCcccHHHHHhhccccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEecCCcE
Q psy8358 162 DSGLIEPILNTVSLHQIKKNSQVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSGEGHL 241 (424)
Q Consensus 162 ~~GlIE~v~~~~tl~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~~G~~ 241 (424)
.||+||+|||++|.++++++..+.|++||..+||+.+++.|.+||.||++|+|||||++|+|+++||||||||+|..||+
T Consensus 1593 GcGVIEviPn~~SRdqlGr~t~~glyeyF~~~~G~~~s~~fq~Ar~NF~~S~A~Ysv~s~lLq~KDRHNGNim~Dd~G~~ 1672 (1803)
T KOG0902|consen 1593 GCGVIEVIPNSKSRDQLGRETDNGLYEYFTRKYGDESSEAFQTARYNFVRSMAGYSVLSYLLQIKDRHNGNIMIDDQGHI 1672 (1803)
T ss_pred CCceEEeCCCCccHHHhcccccccHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHcccccccCCceeEccCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccccCCCCC-CCCCCCCccccHHHHHHhCCC---cchhhHHHHHHHHHHHHhcChhHHHHHHHHHhcCCCCccc
Q psy8358 242 IHIDFGFILSLSPRN-LGFETSPFKLTLEVVEVFGGV---DMFCYFKILMLQGLIAARKHMDKILSLVEIMRSGSQLPCF 317 (424)
Q Consensus 242 ~HIDFg~~fg~~~~~-~~~E~vPFrLT~~~~~~mg~~---~~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~~~lp~~ 317 (424)
+||||||+|+..|+. +++|+ |||||+||+.+|||. ..|..|.++|++||.|+|.+++.|++++++|+ |+++|||
T Consensus 1673 iHIDFGf~~e~sPGgnl~fE~-~fKLt~Em~~~mgG~~~~~~f~~f~elcVk~yLA~R~~~~~iv~~V~~ml-dsgLPCf 1750 (1803)
T KOG0902|consen 1673 IHIDFGFMFESSPGGNLGFEP-PFKLTKEMVMLMGGKMEAKPFKWFQELCVKGYLAARPYMDAIVSLVQSML-DSGLPCF 1750 (1803)
T ss_pred EEEeeeeEEecCCCCccCcCC-CccchHHHHHHhCCCCCCCcHHHHHHHHHHHHHhhchhHHHHHHHHHHHH-hcCCCcc
Confidence 999999999999966 99998 999999999999997 67999999999999999999999999999999 5899999
Q ss_pred ccchhhHHhhhhhcccCccHHHHHHHHHHHHHHhhhcccchhhhhhHHHhhcchh
Q psy8358 318 KSGAATVQNLKNRFHMNLTEEQLQVLIDKLVDSSIHSLSTKLYDGFQYYTNAFQY 372 (424)
Q Consensus 318 ~~~~~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~~~~~t~~~d~~Q~~~nGI~~ 372 (424)
+ | ++|.+++.||+++++|.||+.++..+|.+|+.+|+|+.||.+|+++|||+|
T Consensus 1751 r-g-~~i~nl~~RF~pemsereAa~fm~~vi~~~~~~~rt~~YD~~Q~~~n~I~~ 1803 (1803)
T KOG0902|consen 1751 R-G-QTIGNLRARFAPEMSEREAALFMLSVITDSYLKIRTKMYDQIQYLQNGIPY 1803 (1803)
T ss_pred C-c-chHHHHHHhhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 8 5 499999999999999999999999999999999999999999999999964
No 16
>KOG0903|consensus
Probab=100.00 E-value=5.4e-76 Score=608.11 Aligned_cols=287 Identities=60% Similarity=1.009 Sum_probs=276.5
Q ss_pred cEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceEEEecCCC
Q psy8358 84 PYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCLSNDS 163 (424)
Q Consensus 84 p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~~~~ 163 (424)
|--..+.|.|..|.+|||..|+|||+++|...++|+|+||||||+.++.|++..|.+||.++|.++|++||+|+.+|.++
T Consensus 557 ~s~a~~~E~W~~Kk~RIRktS~Yg~~pnWdL~SVIVKtGdDLrQE~fA~Qli~~f~~IW~EegvplWlRpykIlvtss~s 636 (847)
T KOG0903|consen 557 PSAALSGEDWAEKKARIRKTSPYGHLPNWDLRSVIVKTGDDLRQELFAYQLISAFKDIWQEEGVPLWLRPYKILVTSSDS 636 (847)
T ss_pred cchhhccccHHHHHHHHhccCccccCCCcceEEEeeecCchHHHHHHHHHHHHHHHHHHHHcCCcceeeeEEEEEEecCc
Confidence 55666778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeCCcccHHHHHhhc-cccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEecCCcEE
Q psy8358 164 GLIEPILNTVSLHQIKKNS-QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSGEGHLI 242 (424)
Q Consensus 164 GlIE~v~~~~tl~~i~~~~-~~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~~G~~~ 242 (424)
||||.|+|+.|+|+|++.. +....++|...+++++++.|..|++||+.||||||++||+|+|+||||||||||.+||++
T Consensus 637 GLIEtI~da~SIHsIKk~l~~~~~l~~F~~~~g~~NS~~yk~AQrNFvqSlagYSLvcYlLQvKDRHNGNILiD~EGHII 716 (847)
T KOG0903|consen 637 GLIETIVDAMSIHSIKKRLPNLASLRHFFAAFGKPNSEKYKSAQRNFVQSLAGYSLVCYLLQVKDRHNGNILIDEEGHII 716 (847)
T ss_pred cceeeccchhhHHHHHHhcchhhhHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCceEecCCCCEE
Confidence 9999999999999999984 334456777888999999999999999999999999999999999999999999999999
Q ss_pred EEeccccccCCCCCCCCCCCCccccHHHHHHhCCC--cchhhHHHHHHHHHHHHhcChhHHHHHHHHHhcCCCCcccccc
Q psy8358 243 HIDFGFILSLSPRNLGFETSPFKLTLEVVEVFGGV--DMFCYFKILMLQGLIAARKHMDKILSLVEIMRSGSQLPCFKSG 320 (424)
Q Consensus 243 HIDFg~~fg~~~~~~~~E~vPFrLT~~~~~~mg~~--~~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~~~lp~~~~~ 320 (424)
||||||++++.|++++||.+|||||.+++++|||. +.|.+|+.+|.++|.++|||++.|+.++++|..++++|||+.|
T Consensus 717 HIDFGFmLsnsPgnvgFEsAPFKLT~EylEvmgG~~~d~FdyfK~L~l~gf~a~RKhadrIv~lvEiMq~~S~~pCF~aG 796 (847)
T KOG0903|consen 717 HIDFGFMLSNSPGNVGFESAPFKLTTEYLEVMGGLDSDMFDYFKSLMLQGFMALRKHADRIVLLVEIMQDGSGMPCFRAG 796 (847)
T ss_pred EEeeeeEecCCCCCcccccCchhhHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccccC
Confidence 99999999999999999999999999999999988 7899999999999999999999999999999999999999988
Q ss_pred hhhHHhhhhhcccCccHHHHHHHHHHHHHHhhhcccchhhhhhHHHhhcc
Q psy8358 321 AATVQNLKNRFHMNLTEEQLQVLIDKLVDSSIHSLSTKLYDGFQYYTNAF 370 (424)
Q Consensus 321 ~~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~~~~~t~~~d~~Q~~~nGI 370 (424)
..++++|++||+++++|+|+..++..||+.|+++|+|++||+||+++|||
T Consensus 797 ~~Ti~nL~~RFhLslTEeq~~~lV~~LI~kS~~S~~TrlYD~fQyitnGI 846 (847)
T KOG0903|consen 797 ERTIQNLRQRFHLSLTEEQCQDLVLSLISKSLDSITTRLYDSFQYITNGI 846 (847)
T ss_pred hHHHHHHHHHhcccccHHHHHHHHHHHHhhcccchhhhhhHHHHHHhccc
Confidence 89999999999999999999999999999999999999999999999998
No 17
>KOG0904|consensus
Probab=100.00 E-value=2.3e-74 Score=601.32 Aligned_cols=337 Identities=28% Similarity=0.452 Sum_probs=296.0
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHHhccCCh---HHHHHHHHHHHhhh-ccCCCCceecCCCCCCCceEEeecCCcceec
Q psy8358 2 CLQHAPRLSPQLEFIRVLINMSKTLASLRSK---EAKTSRLLADLTTL-NHNLPARVWLPLYSDQPHHIVRIPPSAAAVL 77 (424)
Q Consensus 2 c~~~~~~l~~q~~~~~~l~~i~~~~~~~~~~---~~r~~~l~~~l~~~-~~~lp~~~~lP~~~~~~~~i~~i~~~~~~v~ 77 (424)
|..|.+.|.+|++.+++|.+++..+|...++ ...+++|+..++.. +.+.+..+..|++| .+...++.+++|+||
T Consensus 710 c~~hlk~l~kQve~l~kLk~lt~~iK~~~~K~~~~~~~~~l~~~lr~~~~~~~lq~l~sPLdP--~~~lgel~iekckvM 787 (1076)
T KOG0904|consen 710 CTHHLKVLTKQVEALEKLKKLTDLIKLSAEKEDVSQVKEQLKLCLRQLANSEALQNLQSPLDP--SLKLGELIIEKCKVM 787 (1076)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccHHHHHHHHHHHHHhHHHHHHHHhccCCCCh--hhhhcchhhhhhhhh
Confidence 7778889999999999999999999943223 23456676666654 44566778999988 788999999999999
Q ss_pred cCCCCCcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceEE
Q psy8358 78 NSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKIL 157 (424)
Q Consensus 78 ~S~~k~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vi 157 (424)
+|| +.|+|+.++++.. | ++. ...+|||+|||||||++++|++++|+.||+.+|+|++|.||.|+
T Consensus 788 ~Sk-krPLwl~~~Np~~------------~--s~~-~v~iIFKNGDDLRQDMLtLQmLriMd~iWk~~glDlrm~PYgcl 851 (1076)
T KOG0904|consen 788 DSK-KRPLWLVFENPDA------------G--SNL-SVGIIFKNGDDLRQDMLTLQMLRIMDNIWKTEGLDLRMLPYGCL 851 (1076)
T ss_pred hcc-CCceEEEecCCCc------------c--cCC-ceeEEEcCCchHHHHHHHHHHHHHHHHHHHhcCCCeeccccccc
Confidence 999 5589998865321 1 111 47899999999999999999999999999999999999999999
Q ss_pred EecCCCceeeeeCCcccHHHHHhhcc----------ccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCC
Q psy8358 158 CLSNDSGLIEPILNTVSLHQIKKNSQ----------VSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKD 227 (424)
Q Consensus 158 p~~~~~GlIE~v~~~~tl~~i~~~~~----------~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigD 227 (424)
|+|...|+||+|+++.|+.+|+...+ +.|.+|+.++. +..+.+-+|.+.|+.|||||||+||||||||
T Consensus 852 s~Gd~iGlIEVV~~s~TIa~IQ~~~g~~~at~afn~~~L~~WLKekN--p~e~kld~AIe~Ft~SCAGYcVATyVLGIgD 929 (1076)
T KOG0904|consen 852 STGDRIGLIEVVRNSETIANIQLNTGNMAATAAFNKDALLNWLKEKN--PGEDKLDAAIEEFTLSCAGYCVATYVLGIGD 929 (1076)
T ss_pred cccceeeeEEEecCchhhhhhhhccccceeeccCCHHHHHHHHhhcC--chHHHHHHHHHHHHHhhccceeeeeeecccc
Confidence 99999999999999999999997643 46889997653 4455689999999999999999999999999
Q ss_pred CCCCceEEecCCcEEEEeccccccCCCCCCCC--CCCCccccHHHHHHhCCC-----c-chhhHHHHHHHHHHHHhcChh
Q psy8358 228 RHNGNILLSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFGGV-----D-MFCYFKILMLQGLIAARKHMD 299 (424)
Q Consensus 228 RH~~NIli~~~G~~~HIDFg~~fg~~~~~~~~--E~vPFrLT~~~~~~mg~~-----~-~~~~f~~~~~~~~~~LR~~~~ 299 (424)
||+|||||.+||++||||||||+|+++..++. |+|||.||++++.+|+.. . .|+.|+.+|++||.+||+|.+
T Consensus 930 RHsDNIMvke~GqlFHIDFGHiLGh~KsKlGi~RERvPFvLT~dFl~VI~~G~~~~~~~eF~kFq~~C~~AYl~lr~H~n 1009 (1076)
T KOG0904|consen 930 RHSDNIMVKETGQLFHIDFGHILGHFKSKLGINRERVPFVLTYDFLHVIQKGKTKNSEKEFQKFQELCEKAYLALRRHGN 1009 (1076)
T ss_pred cccCceEEeccCcEEEEEhhhhhccchhhcCcccccCceEeecceeeeecccCCCCchhHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999999999988876 999999999999999632 3 389999999999999999999
Q ss_pred HHHHHHHHHhcCCCCcccccchhhHHhhhhhcccCccHHHHHHHHHHHHHHhh-hcccchhh
Q psy8358 300 KILSLVEIMRSGSQLPCFKSGAATVQNLKNRFHMNLTEEQLQVLIDKLVDSSI-HSLSTKLY 360 (424)
Q Consensus 300 ~i~~ll~~~~~~~~lp~~~~~~~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~-~~~~t~~~ 360 (424)
+|++|+++|+. .++|.++ +.++|+++++.+.++.+|+||.++|....++++ ++|+|+++
T Consensus 1010 Lfi~LFsmMl~-~glPELs-s~~Di~ylrdtL~l~ktEEeA~k~F~~k~~eA~~~sWtTk~N 1069 (1076)
T KOG0904|consen 1010 LFISLFSMMLG-TGLPELS-SKKDIDYLRDTLALGKTEEEALKYFRDKFEEALRGSWTTKVN 1069 (1076)
T ss_pred cHHHHHHHHHh-cCCCccc-cHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhcCceeeeh
Confidence 99999999996 7999998 678999999999999999999999999999998 58999864
No 18
>KOG0905|consensus
Probab=100.00 E-value=8e-71 Score=585.40 Aligned_cols=360 Identities=24% Similarity=0.359 Sum_probs=315.9
Q ss_pred CCCCcc---cchhHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHhhhccCC--CCceecCCCCCCCceEEeecCCccee
Q psy8358 2 CLQHAP---RLSPQLEFIRVLINMSKTLASLRSKEAKTSRLLADLTTLNHNL--PARVWLPLYSDQPHHIVRIPPSAAAV 76 (424)
Q Consensus 2 c~~~~~---~l~~q~~~~~~l~~i~~~~~~~~~~~~r~~~l~~~l~~~~~~l--p~~~~lP~~~~~~~~i~~i~~~~~~v 76 (424)
|-||.. ++.+|..+++.|.+|+..+|+.. .+.|+..|+..|..+.-.+ .+.+.||++| ...++||.++.|.+
T Consensus 987 ~~~gk~L~~ef~~Q~~Lv~~L~~iae~Vr~as-~s~Rq~vL~~~l~~v~~ff~~n~tcrLPL~P--al~vkGv~i~~CSy 1063 (1639)
T KOG0905|consen 987 DCCGKNLREEFKKQHKLVNELGSIAEDVRSAS-GSARQHVLRTGLGRVDSFFLQNNTCRLPLCP--ALDVKGVRIRECSY 1063 (1639)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chHHHHHHHHhHHHHHHHHHhCCceecccCc--hheecccccccccc
Confidence 444544 79999999999999999999854 6789999999988764332 3479999998 79999999999999
Q ss_pred ccCCCCCcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceE
Q psy8358 77 LNSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKI 156 (424)
Q Consensus 77 ~~S~~k~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~v 156 (424)
|+|++. |++++|. |..++|..+++|||.|||||||+++||||++||+||.++|+|++|.+|+|
T Consensus 1064 FnSNA~-PLKitFv----------------nadp~geni~iIfK~gDDLRQDml~lQmI~iMdkIWl~egLDlrMViFrc 1126 (1639)
T KOG0905|consen 1064 FNSNAL-PLKITFV----------------NADPLGENISIIFKCGDDLRQDMLVLQMIRIMDKIWLQEGLDLRMVIFRC 1126 (1639)
T ss_pred ccCCCc-ceEEEEe----------------cCCCccccceeeeecCchHHHHHHHHHHHHHHHHHHHhcCCceeEEEEEe
Confidence 999965 8998885 22355677999999999999999999999999999999999999999999
Q ss_pred EEecCCCceeeeeCCcccHHHHHhhcc-------ccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCC
Q psy8358 157 LCLSNDSGLIEPILNTVSLHQIKKNSQ-------VSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRH 229 (424)
Q Consensus 157 ip~~~~~GlIE~v~~~~tl~~i~~~~~-------~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH 229 (424)
+|||.+.||+|.|+|+.||++|+.+.+ ..|++|+.++. ++..+|.+|.+||++|||||||+||||||+|||
T Consensus 1127 ~stG~~rgMvElVp~a~TLrKIQve~GltGsfkD~pla~WL~KhN--p~e~eYekA~eNFiySCAG~cVaTYVLGIcDRH 1204 (1639)
T KOG0905|consen 1127 LSTGYDRGMVELVPNAETLRKIQVEEGLTGSFKDRPLAKWLMKHN--PSEFEYEKAVENFIYSCAGWCVATYVLGICDRH 1204 (1639)
T ss_pred ecccccccceeecccHHHHHHHHHHhccccccccchHHHHHHhcC--CCHHHHHHHHHHHHHhcccceeeeEeeeccccc
Confidence 999999999999999999999998753 46899999875 567899999999999999999999999999999
Q ss_pred CCceEEecCCcEEEEeccccccCCCCC--CCCCCCCccccHHHHHHhCCC----cchhhHHHHHHHHHHHHhcChhHHHH
Q psy8358 230 NGNILLSGEGHLIHIDFGFILSLSPRN--LGFETSPFKLTLEVVEVFGGV----DMFCYFKILMLQGLIAARKHMDKILS 303 (424)
Q Consensus 230 ~~NIli~~~G~~~HIDFg~~fg~~~~~--~~~E~vPFrLT~~~~~~mg~~----~~~~~f~~~~~~~~~~LR~~~~~i~~ 303 (424)
|||||++++||+||||||-++|++..+ +..+++||.||.+|.+++.|. ..|..|..+||+||..+|+|.+++++
T Consensus 1205 NDNIMl~~sGHmFHIDFGKFLGhaQMfg~fKRDRaPFVfTSdMayvINgG~kpt~~fq~FVDlCCrAyNiiRK~t~llln 1284 (1639)
T KOG0905|consen 1205 NDNIMLTKSGHMFHIDFGKFLGHAQMFGGFKRDRAPFVFTSDMAYVINGGDKPTQRFQDFVDLCCRAYNIIRKNTNLLLN 1284 (1639)
T ss_pred CCceEEeccCcEEEEehhhhcchHHHhcccccccCCeEEeccchhhhcCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 999999999999999999999999944 445899999999999999654 57999999999999999999999999
Q ss_pred HHHHHhcCCCCcccccchhhHHhhhhhcccCccHHHHHHHHHHHHHHhhhcccchhhhhhHHHhhcchhhhHHHHHhh-h
Q psy8358 304 LVEIMRSGSQLPCFKSGAATVQNLKNRFHMNLTEEQLQVLIDKLVDSSIHSLSTKLYDGFQYYTNAFQYIAATVQNLK-N 382 (424)
Q Consensus 304 ll~~~~~~~~lp~~~~~~~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~~~~~t~~~d~~Q~~~nGI~~~~~~i~~Lr-~ 382 (424)
+|.+|.. .++|.+. +.++++++++.+++..||.||+.+|.++|++|+++|.|+++- .+|+|. .
T Consensus 1285 lL~lM~~-agiPeln-~i~dLkYV~~aL~pq~td~eAT~~FTkmIqsSLgs~~tklNf--------------fiHnLAQm 1348 (1639)
T KOG0905|consen 1285 LLRLMAC-AGIPELN-SIQDLKYVYNALRPQDTDAEATVQFTKMIQSSLGSAFTKLNF--------------FIHNLAQM 1348 (1639)
T ss_pred HHHHHHh-cCCCCcc-chhhHHHHHhhcCcccCChhHHHHHHHHHHHHhhhHHHHHHH--------------HHHHHHHH
Confidence 9999997 6999998 668999999999999999999999999999999999998732 345554 5
Q ss_pred hcCCCCCHHHHHHHHHH
Q psy8358 383 RFHMNLTEEQLQVLIDK 399 (424)
Q Consensus 383 Rf~~~lse~qv~~~i~~ 399 (424)
||..+..++..-.|+.+
T Consensus 1349 ~fs~~~~d~~~lSf~P~ 1365 (1639)
T KOG0905|consen 1349 RFSGSSQDPNTLSFVPR 1365 (1639)
T ss_pred hccCCCCCccccccccc
Confidence 66664444555555544
No 19
>KOG0906|consensus
Probab=100.00 E-value=9.2e-69 Score=545.51 Aligned_cols=334 Identities=28% Similarity=0.450 Sum_probs=290.6
Q ss_pred ccchhHHHHHHHHHHHHHHHhccC-ChHHHHHHHHHHHhhhccCCC----CceecCCCCCCCceEEeecCCcceeccCCC
Q psy8358 7 PRLSPQLEFIRVLINMSKTLASLR-SKEAKTSRLLADLTTLNHNLP----ARVWLPLYSDQPHHIVRIPPSAAAVLNSKD 81 (424)
Q Consensus 7 ~~l~~q~~~~~~l~~i~~~~~~~~-~~~~r~~~l~~~l~~~~~~lp----~~~~lP~~~~~~~~i~~i~~~~~~v~~S~~ 81 (424)
..|..|..|++.|..|++.+++.. .+.+|.+.|+..|.... +++ ..+.+|++| ++.|.+|.|+++.+|+|..
T Consensus 496 ~~L~~Q~~lVd~L~~i~~~v~~~~g~~~kK~e~L~~lL~~~~-~~~l~~~~~i~lpldp--~v~i~~Iip~t~~~FkSsl 572 (843)
T KOG0906|consen 496 GSLEAQQALVDELRRIMKEVKRGSGRRKKKIERLRGLLGDHK-HMNLLDVRLIALPLDP--DVLIKGIIPDTASLFKSSL 572 (843)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHhccc-ccccccceeeccCCCC--CceEeeecCchhhhhhhcc
Confidence 469999999999999999999865 34445566666665432 222 346778876 8999999999999999995
Q ss_pred CCcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceEEEecC
Q psy8358 82 KAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCLSN 161 (424)
Q Consensus 82 k~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~~ 161 (424)
.|..+.|+.. .++..|.+|||+||||||||+++|++++|+++++++++||.++||+|+|||+
T Consensus 573 -~Pl~l~fkt~-----------------~g~g~y~vIFK~GDDLrQDqlV~Qii~lMd~LLkkenlDLkLtpYkVLatg~ 634 (843)
T KOG0906|consen 573 -MPLKLTFKTD-----------------DGGGKYPVIFKKGDDLRQDQLVLQIIRLMDRLLKKENLDLKLTPYKVLATGP 634 (843)
T ss_pred -CceeEEEEec-----------------CCCCceeEEEecCcchhHHHHHHHHHHHHHHHhccccccccceeeEEeccCC
Confidence 5999998631 1223799999999999999999999999999999999999999999999999
Q ss_pred CCceeeeeCCcccHHHHHhhccccHHHHHHHHhCCCChH--HHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEecCC
Q psy8358 162 DSGLIEPILNTVSLHQIKKNSQVSLLEYFIQEFGDINSE--GFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSGEG 239 (424)
Q Consensus 162 ~~GlIE~v~~~~tl~~i~~~~~~~l~~~~~~~~~~~~~~--~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~~G 239 (424)
..|++|+|+ +.|+.+|...++. +..|+.+..++.+.. .=.+.++||++|||||||+||||||||||+||+|++++|
T Consensus 635 ~eG~vefI~-s~~la~Ils~~~~-I~~ylke~~p~e~ap~gi~~~v~dnfVkScaGYsVitYILGvGDRhldNLllT~dG 712 (843)
T KOG0906|consen 635 KEGFVEFIP-SKPLARILSEYHS-ILMYLKEDRPDENAPFGISPEVMDNFVKSCAGYSVITYILGVGDRHLDNLLLTKDG 712 (843)
T ss_pred CcccEEeec-CCcHHHHHHHHHH-HHHHHHhhCCCcCCCCCCChhHHHHHHHhhccceeeeeeecccCCCcCceEEccCC
Confidence 999999997 8999999988754 888998876543211 115688999999999999999999999999999999999
Q ss_pred cEEEEeccccccCCCCCCCCCCCCccccHHHHHHhCCC--cchhhHHHHHHHHHHHHhcChhHHHHHHHHHhcCCCCccc
Q psy8358 240 HLIHIDFGFILSLSPRNLGFETSPFKLTLEVVEVFGGV--DMFCYFKILMLQGLIAARKHMDKILSLVEIMRSGSQLPCF 317 (424)
Q Consensus 240 ~~~HIDFg~~fg~~~~~~~~E~vPFrLT~~~~~~mg~~--~~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~~~lp~~ 317 (424)
++||||||||||++||++ +.|.+|+++|+++|||. ..|..|+..|..||.+||+++++|++|+++|+. +++|.+
T Consensus 713 k~FHiDFgyIlGRDPKP~---pp~MkL~kemve~mgg~es~~Yq~F~s~c~~Af~~LRRssnlIlnLf~LM~~-~~IPDi 788 (843)
T KOG0906|consen 713 KLFHIDFGYILGRDPKPF---PPPMKLAKEMVEGMGGAESKQYQEFRSYCYEAFLILRRSSNLILNLFSLMAD-ANIPDI 788 (843)
T ss_pred cEEEEeeeeeccCCCCCC---CCccccCHHHHHHhcccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhc-CCCCce
Confidence 999999999999999998 68999999999999998 468999999999999999999999999999984 799988
Q ss_pred ccc-hhhHHhhhhhcccCccHHHHHHHHHHHHHHhhhcccchhhhhhHHHh
Q psy8358 318 KSG-AATVQNLKNRFHMNLTEEQLQVLIDKLVDSSIHSLSTKLYDGFQYYT 367 (424)
Q Consensus 318 ~~~-~~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~~~~~t~~~d~~Q~~~ 367 (424)
... .+.|.++++||++++||++|.++|+++|++|+++..+.+.|.++.+-
T Consensus 789 a~dp~k~I~kvqeRfrLdmSde~A~~~fq~lI~~SV~AL~~~v~d~ih~~a 839 (843)
T KOG0906|consen 789 AFDPNKAILKVQERFRLDMSDEAATKHFQKLINESVNALFPQVVDLIHRLA 839 (843)
T ss_pred eeCcchhhHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 743 46799999999999999999999999999999999998877766543
No 20
>cd05172 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. DNA-PK is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). DNA-PK is comprised of a regulatory subunit, containing the Ku70/80 subunit, and a catalytic subunit, which contains a NUC194 domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. It is part of a multi-component system involved in non-homologous end joining (NHEJ), a process of repairing double st
Probab=100.00 E-value=5.1e-63 Score=471.17 Aligned_cols=227 Identities=28% Similarity=0.372 Sum_probs=209.2
Q ss_pred EeecCCcceeccCCCCCcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhC-
Q psy8358 67 VRIPPSAAAVLNSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIE- 145 (424)
Q Consensus 67 ~~i~~~~~~v~~S~~k~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~- 145 (424)
.+|.+ .+.|++|++ .|..+.|. | .+|+.|.+|+|+|||||||+|+||++++||.+|+++
T Consensus 2 ~~~~~-~v~v~~S~~-~Pkri~~~----------------~--~dG~~~~fl~K~~dDlR~D~r~~Ql~~l~n~~l~~~~ 61 (235)
T cd05172 2 VGFDE-RVLVLSSLR-KPKRITIR----------------G--SDEKEYPFLVKGGEDLRQDQRIQQLFGVMNNILAQDT 61 (235)
T ss_pred CCcCC-ceEEeccCC-CCEEEEEE----------------C--CCCCEEEEEEECCCcccHHHHHHHHHHHHHHHHHhCh
Confidence 45664 799999996 58988875 2 467889999999999999999999999999999863
Q ss_pred ---CCCceeecceEEEecCCCceeeeeCCcccHHHHHhhccccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHH
Q psy8358 146 ---RVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKNSQVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYL 222 (424)
Q Consensus 146 ---~~~l~l~~Y~vip~~~~~GlIE~v~~~~tl~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yi 222 (424)
++++.++||+|+|+|+++|+||||+++.|+++|+++ +.+.+||.+.+ +++++|+.+|++|+.|||+||++|||
T Consensus 62 ~~~~~~l~~~~y~vipls~~~GlIE~v~~~~sl~~i~~~--~~l~~~~~~~~--~~~~~~~~~r~~F~~S~A~~S~~~Yi 137 (235)
T cd05172 62 ACRQRALQLRTYQVIPMTPRFGLIEWLENTTPLKEILKN--DLLRRALVEMS--ASPEAFLSLRDHFAKSLAAMCVSHWI 137 (235)
T ss_pred hhccCCceeecceEEEeCCCCceEEEcCCchhHHHHHhh--HHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHhhe
Confidence 789999999999999999999999999999999986 67899998876 45789999999999999999999999
Q ss_pred hccCCCCCCceEEec-CCcEEEEeccccccCCCCC-CCCCCCCccccHHHHHHhCCCcchhhHHHHHHHHHHHHhcChhH
Q psy8358 223 LQVKDRHNGNILLSG-EGHLIHIDFGFILSLSPRN-LGFETSPFKLTLEVVEVFGGVDMFCYFKILMLQGLIAARKHMDK 300 (424)
Q Consensus 223 LgigDRH~~NIli~~-~G~~~HIDFg~~fg~~~~~-~~~E~vPFrLT~~~~~~mg~~~~~~~f~~~~~~~~~~LR~~~~~ 300 (424)
|||||||++||||++ ||+++|||||++|+++++. ..||+||||||++|+++||+.+.+|.|+..|+.++.+||+|++.
T Consensus 138 lglgDRH~~NIli~~~tG~v~HIDfg~~f~~~~~~~~~pE~vPFRLT~~~~~~~g~~g~~G~f~~~~~~~~~~Lr~~~~~ 217 (235)
T cd05172 138 LGIGDRHLSNFLVDLETGGLVGIDFGHAFGTATQFLPIPELMPFRLTPQFVNLMEPMKADGLLRSCMVHTLRALRNERHL 217 (235)
T ss_pred eeccCCCcccEEEECCCCcEEEEeeHhhhccCCccCCCCCCCCeeeCHHHHHHhCCCCCCChHHHHHHHHHHHHHcCHHH
Confidence 999999999999996 9999999999999999974 45799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCccc
Q psy8358 301 ILSLVEIMRSGSQLPCF 317 (424)
Q Consensus 301 i~~ll~~~~~~~~lp~~ 317 (424)
|++++++|++||.+.|.
T Consensus 218 l~~~l~~f~~dpl~~w~ 234 (235)
T cd05172 218 LLSTMDVFVKEPSLDWK 234 (235)
T ss_pred HHHHHHHHhhCchhhhc
Confidence 99999999999877663
No 21
>cd00892 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATR is also referred to as Mei-41 (Drosophila), Esr1/Mec1p (Saccharomyces cerevisiae), Rad3 (Schizosaccharomyces pombe), and FRAP-related protein (human). ATR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATR contains a UME domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. Together with its downstream effector kinase, Chk1, ATR plays a central
Probab=100.00 E-value=8.8e-63 Score=470.36 Aligned_cols=228 Identities=25% Similarity=0.407 Sum_probs=212.1
Q ss_pred eecCCcceeccCCCCCcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhC--
Q psy8358 68 RIPPSAAAVLNSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIE-- 145 (424)
Q Consensus 68 ~i~~~~~~v~~S~~k~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~-- 145 (424)
+|. +++.|++|++ .|..+.+. | ++|+.|.+|+|+|||||||+++||++++||.+|+++
T Consensus 3 ~~~-~~~~v~~s~~-~P~~i~~~----------------~--~dG~~~~~l~K~~dDLRqD~ri~ql~~l~n~il~~~~~ 62 (237)
T cd00892 3 GFE-DEVEILNSLQ-KPKKITLI----------------G--SDGNSYPFLCKPKDDLRKDARLMEFNTLINRLLSKDPE 62 (237)
T ss_pred ccc-CeEEEEeccC-CceEEEEE----------------c--CCCCEEEEEEeCCCcccHHHHHHHHHHHHHHHHHhCch
Confidence 344 5799999995 58988875 2 467899999999999999999999999999999887
Q ss_pred --CCCceeecceEEEecCCCceeeeeCCcccHHHHHhhc-cccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHH
Q psy8358 146 --RVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKNS-QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYL 222 (424)
Q Consensus 146 --~~~l~l~~Y~vip~~~~~GlIE~v~~~~tl~~i~~~~-~~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yi 222 (424)
+++++++||+|+|+|+++||||||+|+.|+++|.++. ++.+.+||.++++ +++.|+++|++|+.|||+||++|||
T Consensus 63 ~~~~~l~~~~y~Vipl~~~~GlIE~v~~~~sl~~i~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~F~~SlA~~s~~~Yi 140 (237)
T cd00892 63 SRRRRLYIRTYAVIPLNEECGIIEWVPNTATLRSILLEIYPPVFHEWFLENFP--DPSAWLKARNAYTRSTAVMSMVGYI 140 (237)
T ss_pred hccCceeeEeceEEEcCCCCceEEECCCCccHHHHHHHhCCHHHHHHHHHHCc--CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999998864 5678999999885 5678999999999999999999999
Q ss_pred hccCCCCCCceEEec-CCcEEEEeccccccCCCCCCCCCCCCccccHHHHHHhCCCcchhhHHHHHHHHHHHHhcChhHH
Q psy8358 223 LQVKDRHNGNILLSG-EGHLIHIDFGFILSLSPRNLGFETSPFKLTLEVVEVFGGVDMFCYFKILMLQGLIAARKHMDKI 301 (424)
Q Consensus 223 LgigDRH~~NIli~~-~G~~~HIDFg~~fg~~~~~~~~E~vPFrLT~~~~~~mg~~~~~~~f~~~~~~~~~~LR~~~~~i 301 (424)
|||||||++||||++ +|+++|||||++|+.++.+..||+||||||++|+++||+.+.+|.|+..|+.++.+||+|++.|
T Consensus 141 lgigDRh~~NIli~~~tG~~~HIDfg~~~~~~~~~~~pe~vPFRLT~~~~~~lg~~g~~g~F~~~~~~~~~~Lr~~~~~l 220 (237)
T cd00892 141 LGLGDRHGENILFDSNTGDVVHVDFNCLFDKGETLEVPERVPFRLTQNMVDAMGVLGVEGLFRKSCEVTLRLLRSNKETL 220 (237)
T ss_pred hccCCCCcccEEEEcCCCcEEEEehHhhhcccccCCCCCCCCcccCHHHHHHhCCCCCCCchHHHHHHHHHHHHhCHHHH
Confidence 999999999999998 9999999999999999877788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCccc
Q psy8358 302 LSLVEIMRSGSQLPCF 317 (424)
Q Consensus 302 ~~ll~~~~~~~~lp~~ 317 (424)
++++++|++||.+.|.
T Consensus 221 ~~~l~~fi~dpl~~w~ 236 (237)
T cd00892 221 MSVLETFIHDPLVEWS 236 (237)
T ss_pred HHHHHHHhhccchhcc
Confidence 9999999999888774
No 22
>cd05169 PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. TOR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). TOR contains a rapamycin binding domain, a catalytic domain, and a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. It is also called FRAP (FK506 binding protein 12-rapamycin associated protein). TOR is a central component of the eukaryotic growth regulatory network. It controls the expression of many genes transcribed by all three RNA polymerases. It associates with
Probab=100.00 E-value=5.9e-61 Score=469.56 Aligned_cols=229 Identities=24% Similarity=0.354 Sum_probs=205.0
Q ss_pred EeecCCcceeccCCCCCcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhC-
Q psy8358 67 VRIPPSAAAVLNSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIE- 145 (424)
Q Consensus 67 ~~i~~~~~~v~~S~~k~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~- 145 (424)
.+|. .++.|++|++ .|..+.+. | ++|+.|.+|+|+|||||||+|+||++++||.+|+++
T Consensus 2 ~~f~-~~v~v~~s~~-~pk~i~~~----------------g--sdG~~y~fl~K~~dDlR~D~r~~ql~~~~n~il~~~~ 61 (280)
T cd05169 2 SSFD-PVLKVIPSKQ-RPRRLTIV----------------G--SDGKEYKFLLKGHEDLRLDERVMQLFGLINTLLKNDS 61 (280)
T ss_pred cccc-CeEEEEeCCC-CCeEEEEE----------------C--CCCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHhCh
Confidence 3455 4789999995 58988875 3 478899999999999999999999999999999886
Q ss_pred ---CCCceeecceEEEecCCCceeeeeCCcccHHHHHhhcc---------------------------------------
Q psy8358 146 ---RVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKNSQ--------------------------------------- 183 (424)
Q Consensus 146 ---~~~l~l~~Y~vip~~~~~GlIE~v~~~~tl~~i~~~~~--------------------------------------- 183 (424)
++++.++||.|+|+|+++||||||+++.|+.+|.+.+.
T Consensus 62 ~~~~~~l~~~ty~Vipls~~~GlIE~v~~~~sl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~i~~ 141 (280)
T cd05169 62 ETSKRNLSIQTYSVIPLSPNVGLIGWVPGCDTLHSLIREYRKKRNIPLNLEHRLMELKSAPDYDNLTLIQKLEVFEYALN 141 (280)
T ss_pred hhhhcCcceeeccEEecCCCcceEEeCCCCchHHHHHHHHHHHcCCChhHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHH
Confidence 48999999999999999999999999999999975421
Q ss_pred ----ccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEec-CCcEEEEeccccccCCCCC-C
Q psy8358 184 ----VSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSG-EGHLIHIDFGFILSLSPRN-L 257 (424)
Q Consensus 184 ----~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~-~G~~~HIDFg~~fg~~~~~-~ 257 (424)
+.+.+||...+ ++++.|+.+|++|++|+|+||++||||||||||++||||++ ||+++|||||++|+.+++. .
T Consensus 142 ~~~~~~l~~~~~~~~--~~~~~w~~~r~~F~~S~A~~Sv~~YilglgDRH~~NIll~~~tG~v~HIDfg~~f~~~~~~~~ 219 (280)
T cd05169 142 NTPGDDLRKILWLKS--PSSEAWLERRTNFTRSLAVMSMVGYILGLGDRHPSNIMIDRLTGKVIHIDFGDCFEVAMHREK 219 (280)
T ss_pred hCCHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHhheeccCCCcceEEEEcCCCCEEEEecHHHHhhccccCC
Confidence 12455555544 46789999999999999999999999999999999999998 9999999999999999864 4
Q ss_pred CCCCCCccccHHHHHHhCCCcchhhHHHHHHHHHHHHhcChhHHHHHHHHHhcCCCCccc
Q psy8358 258 GFETSPFKLTLEVVEVFGGVDMFCYFKILMLQGLIAARKHMDKILSLVEIMRSGSQLPCF 317 (424)
Q Consensus 258 ~~E~vPFrLT~~~~~~mg~~~~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~~~lp~~ 317 (424)
.||.||||||++|+++||+.+.+|.|+..|+.++.+||+|++.|++++++|++||.+.|.
T Consensus 220 ~pE~VPFRLT~~~~~~lG~~g~~G~F~~~~~~~~~~Lr~~~~~l~~~l~~f~~dpl~~W~ 279 (280)
T cd05169 220 FPEKVPFRLTRMLVNALGVSGIEGTFRTTCEDVMNVLRENKESLMAVLEAFVHDPLLSWR 279 (280)
T ss_pred CCCcCCcccCHHHHHHhCCCCCCCchHHHHHHHHHHHhcChHHHHHHHHHHHhCcccccc
Confidence 579999999999999999999999999999999999999999999999999999887773
No 23
>cd00142 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members of the family include PI3K, phosphoinositide 4-kinase (PI4K), PI3K-related protein kinases (PIKKs), and TRansformation/tRanscription domain-Associated Protein (TRRAP). PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives, while PI4K catalyze the phosphorylation of the 4-hydroxyl of PtdIns. PIKKs are protein kinases that catalyze the phosphorylation of serine/threonine residues, especially those that are followed by a glutamine. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the
Probab=100.00 E-value=3.5e-60 Score=448.35 Aligned_cols=214 Identities=32% Similarity=0.538 Sum_probs=201.5
Q ss_pred cCCcceeccCCCCCcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhC-CCC
Q psy8358 70 PPSAAAVLNSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIE-RVP 148 (424)
Q Consensus 70 ~~~~~~v~~S~~k~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~-~~~ 148 (424)
..+.++|++|+ +.|.++.+. | .+|+.|.+|+|+|||||||+++||++++||.+|+++ +++
T Consensus 4 ~~~~~~v~~s~-~~P~~l~~~----------------~--~dg~~~~~l~K~~ddlR~D~~~~ql~~~~n~il~~~~~~~ 64 (219)
T cd00142 4 DVKICRIMPSK-TRPKKLTLI----------------G--ADGKEYRILFKNGDDLRQDERVLQFIRLMNKILKKELGLD 64 (219)
T ss_pred cCCceEEEccc-CCCEEEEEE----------------c--cCCCEEEEEEeCCCchhHHHHHHHHHHHHHHHHHhCCCCC
Confidence 45689999999 569999875 2 357899999999999999999999999999999998 999
Q ss_pred ceeecceEEEecCCCceeeeeCCcccHHHHHhhccccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCC
Q psy8358 149 LILHPYKILCLSNDSGLIEPILNTVSLHQIKKNSQVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDR 228 (424)
Q Consensus 149 l~l~~Y~vip~~~~~GlIE~v~~~~tl~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDR 228 (424)
++++||.|+|+|+++|+||||+++.|++ +.+.+|+...++ ++++|+++|++|+.|+|+||++||+||||||
T Consensus 65 l~~~~y~vipls~~~GlIE~v~~~~sl~-------~~l~~~~~~~~~--~~~~~~~~~~~F~~SlA~~s~~~YilglgDR 135 (219)
T cd00142 65 LFLTTYSVIPLSPRSGLIEVVPGSVTLE-------DDLSKWLKRKSP--DEDEWQEARENFISSLAGYSVAGYILGIGDR 135 (219)
T ss_pred ceEEeEEEEEecCCceEEEEeCCCchhH-------HHHHHHHHHHCc--CHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999999999999999999 567889998774 4678999999999999999999999999999
Q ss_pred CCCceEEec-CCcEEEEeccccccCCCCCCCCCCCCccccHHHHHHhCCCcchhhHHHHHHHHHHHHhcChhHHHHHHHH
Q psy8358 229 HNGNILLSG-EGHLIHIDFGFILSLSPRNLGFETSPFKLTLEVVEVFGGVDMFCYFKILMLQGLIAARKHMDKILSLVEI 307 (424)
Q Consensus 229 H~~NIli~~-~G~~~HIDFg~~fg~~~~~~~~E~vPFrLT~~~~~~mg~~~~~~~f~~~~~~~~~~LR~~~~~i~~ll~~ 307 (424)
|++||||++ +|+++|||||++|+.+|++..+|+||||||++|+++||+.+.+|.|+..|++++.+||+|++.|++++++
T Consensus 136 h~~NIli~~~~G~~~hIDfg~~~~~~~~~~~~e~vPFRLT~~~~~~~g~~~~~g~F~~~~~~~~~~lr~~~~~i~~ll~~ 215 (219)
T cd00142 136 HPDNIMIDLDTGKLFHIDFGFIFGKRKKFLGRERVPFRLTPDLVNALGTGGVFGPFRSLCVKAMLILRRHAGLLLNLLSL 215 (219)
T ss_pred CCccEEEECCCCeEEEEeeHHhhCcCcCCCCCCCCCEeccHHHHHHhCCcchhhhHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 999999998 9999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred HhcC
Q psy8358 308 MRSG 311 (424)
Q Consensus 308 ~~~~ 311 (424)
|++|
T Consensus 216 ~~~~ 219 (219)
T cd00142 216 MLRD 219 (219)
T ss_pred hccC
Confidence 9864
No 24
>cd05171 PIKKc_ATM Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATM is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATM contains a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. ATM is critical in the response to DNA double strand breaks (DSBs) caused by radiation. It is activated at the site of a DSB and phosphorylates key substrates that trigger pathways that regulate DNA repair and cell cycle checkpoints at the G1/S, S phase, and G2/M transi
Probab=100.00 E-value=3.5e-60 Score=463.13 Aligned_cols=227 Identities=24% Similarity=0.409 Sum_probs=206.6
Q ss_pred eecCCcceeccCCCCCcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhC--
Q psy8358 68 RIPPSAAAVLNSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIE-- 145 (424)
Q Consensus 68 ~i~~~~~~v~~S~~k~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~-- 145 (424)
++. .+..|+.|+++ |..+.+. | ++|+.|.||+|+|||||||+|+||++++||.+|+++
T Consensus 3 ~f~-~~v~v~~s~~~-Pkri~~~----------------g--sdG~~y~fl~K~~dDlR~D~rimQl~~~~n~il~~~~e 62 (279)
T cd05171 3 KFK-DVFTTAGGINA-PKIITCV----------------G--SDGKKYKQLLKGGDDDRQDAVMEQVFQLVNTLLERNKE 62 (279)
T ss_pred Ccc-CeEEEecCCCC-CEEEEEE----------------C--CCCCEEEEEecCCCcccHHHHHHHHHHHHHHHHhhChh
Confidence 344 36889999977 9988875 3 578899999999999999999999999999999876
Q ss_pred --CCCceeecceEEEecCCCceeeeeCCcccHHHHHhhc-----------------------------------------
Q psy8358 146 --RVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKNS----------------------------------------- 182 (424)
Q Consensus 146 --~~~l~l~~Y~vip~~~~~GlIE~v~~~~tl~~i~~~~----------------------------------------- 182 (424)
++++.++||.|+|+|+++||||||+|+.|+++|.+..
T Consensus 63 ~~~r~l~i~~y~vipls~~~GLIe~v~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~f~~i~~ 142 (279)
T cd05171 63 TRKRKLRIRTYKVVPLSPRAGILEWVDGTIPLGEYLVGATGAHERYRPGDWTARKCRKAMAEVQKESNEERLKVFLKICK 142 (279)
T ss_pred hhhcCceeecceEEecCCCceEEEECCCChhHHHHHHHhhhcccccCccchhHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Confidence 7999999999999999999999999999999996542
Q ss_pred --cccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEec-CCcEEEEeccccccCCCCCCCC
Q psy8358 183 --QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSG-EGHLIHIDFGFILSLSPRNLGF 259 (424)
Q Consensus 183 --~~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~-~G~~~HIDFg~~fg~~~~~~~~ 259 (424)
.+.+.+||.+.++ ++++|+.+|++|+.|+|+||++||||||||||++||||++ ||+++|||||++|++++.+..|
T Consensus 143 ~~~p~l~~~f~~~~~--~~~~~~~~r~~F~~S~A~~s~~~yilglgDRh~~NIll~~~tG~v~hiDf~~~f~~~~~l~~p 220 (279)
T cd05171 143 NFRPVFRYFFLEKFL--DPQDWFERRLAYTRSVATSSIVGYILGLGDRHANNILIDEKTAEVVHIDLGIAFEQGKILPVP 220 (279)
T ss_pred hCcHHHHHHHHHHCc--CHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCcCcEEEEechhhhccCcCCCCC
Confidence 0124567777764 5789999999999999999999999999999999999996 9999999999999999987778
Q ss_pred CCCCccccHHHHHHhCCCcchhhHHHHHHHHHHHHhcChhHHHHHHHHHhcCCCCcc
Q psy8358 260 ETSPFKLTLEVVEVFGGVDMFCYFKILMLQGLIAARKHMDKILSLVEIMRSGSQLPC 316 (424)
Q Consensus 260 E~vPFrLT~~~~~~mg~~~~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~~~lp~ 316 (424)
|+||||||++|+++||+.+.+|.|+..|+.++.+||+|++.|+++|++|++||.+.|
T Consensus 221 e~vPFRLT~~~~~~lg~~g~~g~f~~~~~~~~~~Lr~~~~~l~~~l~~fv~dpl~~W 277 (279)
T cd05171 221 ETVPFRLTRDIVDGMGITGVEGVFRRCCEKTLEVLRDNKDAILTILEVLLYDPLYSW 277 (279)
T ss_pred CcCChhhhHHHHHHhCCCCCcchHHHHHHHHHHHHHcChHHHHHHHHHHHhCccccc
Confidence 999999999999999999999999999999999999999999999999999987766
No 25
>cd05164 PIKKc Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members include ATM (Ataxia telangiectasia mutated), ATR (Ataxia telangiectasia and Rad3-related), TOR (Target of rapamycin), SMG-1 (Suppressor of morphogenetic effect on genitalia-1), and DNA-PK (DNA-dependent protein kinase). PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). They show strong preference for phosphorylating serine/threonine residues followed by a glutamine and are also referred to as (S/T)-Q-directed kinases. They all contain a FATC (FRAP, ATM and TRRAP, C-terminal) d
Probab=100.00 E-value=5.4e-60 Score=447.22 Aligned_cols=215 Identities=32% Similarity=0.484 Sum_probs=199.4
Q ss_pred eecCCcceeccCCCCCcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhCC-
Q psy8358 68 RIPPSAAAVLNSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIER- 146 (424)
Q Consensus 68 ~i~~~~~~v~~S~~k~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~- 146 (424)
+|. +.+.|++|++ +|..+.+. | ++|+.|.+|+|+|||||||+++||++++||.+|++++
T Consensus 3 ~~~-~~v~v~~S~~-~P~~i~~~----------------~--~dG~~~~fl~K~~dDlR~D~rv~ql~~~~n~il~~~~~ 62 (222)
T cd05164 3 SFD-DAVRILGSKQ-KPKKITLT----------------G--SDGKKYLFLVKGGEDLRQDQRIMQLFQFCNTLLAKDAE 62 (222)
T ss_pred ccc-CeeEEecccC-CCEEEEEE----------------C--CCCCEEEEEEeCCCcccHHHHHHHHHHHHHHHHHhCch
Confidence 444 4789999996 48988875 2 4678999999999999999999999999999998876
Q ss_pred ---CCceeecceEEEecCCCceeeeeCCcccHHHHHhhccccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHh
Q psy8358 147 ---VPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKNSQVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLL 223 (424)
Q Consensus 147 ---~~l~l~~Y~vip~~~~~GlIE~v~~~~tl~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiL 223 (424)
++++++||.|+|+|+++||||||+|+.|++.+ +.+|+.+.++ ++++|+.+|++|+.|+|+||++||+|
T Consensus 63 ~~~~~l~~~~y~vipls~~~GliE~v~~~~sl~~~-------l~~~~~~~~~--~~~~~~~~r~~F~~SlA~~s~~~Yvl 133 (222)
T cd05164 63 CRRRKLTIRTYAVIPLNSRSGLIEWVEGTTTLKPV-------LKKWFWLQFP--DPEQWFAARKNYTRSTAVMSIVGYIL 133 (222)
T ss_pred hccCceEeecceEEEcCCCCceEEEcCCcchHHHH-------HHHHHHHHCc--CHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999954 6678888774 57799999999999999999999999
Q ss_pred ccCCCCCCceEEec-CCcEEEEeccccccCCCCCCCCCCCCccccHHHHHHhCCCcchhhHHHHHHHHHHHHhcChhHHH
Q psy8358 224 QVKDRHNGNILLSG-EGHLIHIDFGFILSLSPRNLGFETSPFKLTLEVVEVFGGVDMFCYFKILMLQGLIAARKHMDKIL 302 (424)
Q Consensus 224 gigDRH~~NIli~~-~G~~~HIDFg~~fg~~~~~~~~E~vPFrLT~~~~~~mg~~~~~~~f~~~~~~~~~~LR~~~~~i~ 302 (424)
||||||++||||++ +|+++|||||++|+.++++..||.||||||++|+++||+.+.+|.|+..|+.++.+||+|++.|+
T Consensus 134 glgDRh~~NIli~~~tG~v~hIDf~~~~~~~~~~~~~e~vPFRLT~~~~~~lg~~g~~G~f~~~~~~~~~~Lr~~~~~l~ 213 (222)
T cd05164 134 GLGDRHLDNILIDRETGEVVHIDFGCIFEKGKTLPVPELVPFRLTRNIINGMGITGVEGLFRKICEQTLEVFRKHRDTLI 213 (222)
T ss_pred ccCCCCCceEEEECCCCcEEEEccHHhhccCCCCCCCCCCCEEeCHHHHHHhCCCCcCChHHHHHHHHHHHHHhCHHHHH
Confidence 99999999999998 99999999999999999877799999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcC
Q psy8358 303 SLVEIMRSG 311 (424)
Q Consensus 303 ~ll~~~~~~ 311 (424)
+++++|++|
T Consensus 214 s~l~~fv~d 222 (222)
T cd05164 214 AFLEVFVYD 222 (222)
T ss_pred HHHHHHhcC
Confidence 999999975
No 26
>KOG0890|consensus
Probab=100.00 E-value=3.2e-59 Score=526.79 Aligned_cols=291 Identities=24% Similarity=0.391 Sum_probs=247.5
Q ss_pred EEeecCCcceeccCCCCCcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHh-
Q psy8358 66 IVRIPPSAAAVLNSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDI- 144 (424)
Q Consensus 66 i~~i~~~~~~v~~S~~k~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~- 144 (424)
|.||. ++++||+|.+| |.++.+. | ++|+.|.+|+|..||||+|.|.|++..++|++|.+
T Consensus 2043 IsgF~-d~V~Il~SLqK-PKkI~l~----------------G--sDGk~Y~~lCKpKDDLRKD~RlMeFn~lin~lL~KD 2102 (2382)
T KOG0890|consen 2043 ISGFS-DEVKILNSLQK-PKKIKLR----------------G--SDGKIYPFLCKPKDDLRKDARLMEFNELINKLLRKD 2102 (2382)
T ss_pred hhcch-HHHHHHHhccC-CeEEEEE----------------c--CCCCEeEEEeCchhhhhhhhHHHHHHHHHHHHHhhC
Confidence 66676 78999999976 8888764 4 58899999999999999999999999999999976
Q ss_pred ---CCCCceeecceEEEecCCCceeeeeCCcccHHHHHhh---------------------------------------c
Q psy8358 145 ---ERVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKN---------------------------------------S 182 (424)
Q Consensus 145 ---~~~~l~l~~Y~vip~~~~~GlIE~v~~~~tl~~i~~~---------------------------------------~ 182 (424)
+++.|+++||.|||+++.||+||||||+.|+++|..+ +
T Consensus 2103 ~eSRrR~L~IRTYaViPLneeCGiIEWv~nt~slR~IL~klY~~rg~~~~~~~l~~~~~~~~~~~~~~~~~F~~~~lpkf 2182 (2382)
T KOG0890|consen 2103 QESRRRKLYIRTYAVIPLNEECGIIEWVPNTASLREILDKLYMTRGKWMIKKQLRSVHLKKQMAKEEKGKVFREKLLPKF 2182 (2382)
T ss_pred HHHhhhcceeeEEEEeecCCccceEEecCCcchHHHHHHHHHHhccccchhhHHHHhcCcHhhcccchhhhhHHhhcccC
Confidence 4789999999999999999999999999999998532 1
Q ss_pred cccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEec-CCcEEEEeccccccCCCCCCCCCC
Q psy8358 183 QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSG-EGHLIHIDFGFILSLSPRNLGFET 261 (424)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~-~G~~~HIDFg~~fg~~~~~~~~E~ 261 (424)
++.+++||...|++ |..|+.+|++|++|.|+|||+|||||+||||.+|||+|. ||++||+||.++|++|..+..||.
T Consensus 2183 PPVFheWFl~~FPe--P~sW~~SR~~Y~rTtAVMSmVGyIlGLGDRHgENILFDs~TGdcVHVDFnCLFnKGetlevPEi 2260 (2382)
T KOG0890|consen 2183 PPVFHEWFLESFPE--PGSWFASRNNYARTTAVMSMVGYILGLGDRHGENILFDSTTGDCVHVDFNCLFNKGETLEVPEL 2260 (2382)
T ss_pred CcHHHHHHHHhCCC--chHHHHHHHHHHHHHHHHHHHHHHhcCccccccceeeecCCCcEEEEeecccccCCcccCCCCc
Confidence 35689999999965 457999999999999999999999999999999999996 999999999999999999999999
Q ss_pred CCccccHHHHHHhCCCcchhhHHHHHHHHHHHHhcChhHHHHHHHHHhcCCCCcccccchhhHHhhhhhcccCccH-HHH
Q psy8358 262 SPFKLTLEVVEVFGGVDMFCYFKILMLQGLIAARKHMDKILSLVEIMRSGSQLPCFKSGAATVQNLKNRFHMNLTE-EQL 340 (424)
Q Consensus 262 vPFrLT~~~~~~mg~~~~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~~~lp~~~~~~~~i~~l~~r~~l~~s~-~eA 340 (424)
||||||+||+++||+.|.+|.|+..|+.+++.+|+|.+.++++++.|++||.+.|-+.... +-....++ .++
T Consensus 2261 VPFRLT~NMidamGp~G~EG~Frk~cEiTLrLlR~n~e~LMSiL~tF~~DPlvew~~~~k~-------~s~~~i~e~~~~ 2333 (2382)
T KOG0890|consen 2261 VPFRLTQNMIDAMGPLGLEGSFRKVCEITLRLLRKNRETLMSILETFVYDPLVEWNRPSKG-------RSPKKINEDRLV 2333 (2382)
T ss_pred cceecchhHHhhcCCcccchhHHHHHHHHHHHHHhcchhHHHHHHHHHhCchhhccCcccC-------CCcCcccchHHH
Confidence 9999999999999999999999999999999999999999999999999988777652111 11111111 222
Q ss_pred HHHHHHHHHHhhhcccchhhhhhHHHh--hcchhhhHHHHHhhhhcCCCCC-HHHHHHHHHHHhhccccccccccccccc
Q psy8358 341 QVLIDKLVDSSIHSLSTKLYDGFQYYT--NAFQYIAATVQNLKNRFHMNLT-EEQLQVLIDKLVDTSIHSLSTKLYDGFQ 417 (424)
Q Consensus 341 ~~~~~~lI~~S~~~~~t~~~d~~Q~~~--nGI~~~~~~i~~Lr~Rf~~~ls-e~qv~~~i~~~id~s~~~~~tk~Yd~~q 417 (424)
...+++. +|.+. .| .++| |+|+..+|++||+. +.+++||-||-
T Consensus 2334 i~~i~~r---------------lqG~~~~~g----------------lPLSveGq~~~LI~eATse---enL~~MYIGW~ 2379 (2382)
T KOG0890|consen 2334 IGRIRGR---------------LQGAMKVDG----------------LPLSVEGQASSLIEEATSE---ENLSEMYIGWM 2379 (2382)
T ss_pred HhHHHHH---------------HhccCcCCC----------------CccchhhHHHHHHHHhcCH---HHHHHHHhhhh
Confidence 2222222 23321 23 2454 99999999999999 44899999999
Q ss_pred cc
Q psy8358 418 YY 419 (424)
Q Consensus 418 ~~ 419 (424)
||
T Consensus 2380 p~ 2381 (2382)
T KOG0890|consen 2380 PF 2381 (2382)
T ss_pred cc
Confidence 87
No 27
>cd05170 PIKKc_SMG1 Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. SMG-1 is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). In addition to its catalytic domain, SMG-1 contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. SMG-1 plays a critical role in the mRNA surveillance mechanism known as non-sense mediated mRNA decay (NMD). NMD protects the cells from the accumulation of aberrant mRNAs with premature termination codons (PTCs) generated by geno
Probab=100.00 E-value=2.7e-58 Score=455.05 Aligned_cols=229 Identities=21% Similarity=0.301 Sum_probs=200.7
Q ss_pred eecCCcceeccCCCCCcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHhC--
Q psy8358 68 RIPPSAAAVLNSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDIE-- 145 (424)
Q Consensus 68 ~i~~~~~~v~~S~~k~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~-- 145 (424)
+|. +++.|++|++ .|..+.+. | +||+.|.||+|+|||||||+|+||++++||.+|+++
T Consensus 3 ~f~-~~v~V~~Sk~-~Pkri~~~----------------g--sDG~~y~fLlK~~dDLR~D~RimQlf~l~N~ll~~~~~ 62 (307)
T cd05170 3 SVG-STVTILPTKT-KPKKLAFL----------------G--SDGKKYTYLFKGREDLHLDERIMQFLSIVNTMFASIKD 62 (307)
T ss_pred ccc-CeEEEEecCC-CceEEEEE----------------C--CCCCEEEEEecCCCcccHHHHHHHHHHHHHHHHHhChh
Confidence 444 4788999995 58988875 3 578899999999999999999999999999999874
Q ss_pred --CCCceeecceEEEecCCCceeeeeCCcccHHHHHhhcc------------------c---------------------
Q psy8358 146 --RVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKNSQ------------------V--------------------- 184 (424)
Q Consensus 146 --~~~l~l~~Y~vip~~~~~GlIE~v~~~~tl~~i~~~~~------------------~--------------------- 184 (424)
++++.++||.|+|+++++||||||+|+.|+.+|.+.+. .
T Consensus 63 ~~~r~L~i~tY~ViPLs~~~GLIEwv~~~~tl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 142 (307)
T cd05170 63 QESPRFRARHYSVTPLGPRSGLIQWVDGATPLFGLYKRWQQREAVLQAQKSQVGYQNPQIPGIVPRPSDLFYNKITPALK 142 (307)
T ss_pred hhccCceeecceEEEcCCCcceEEEcCCChhHHHHHHHHHHhhhhhhhhhhccccccccccccccchhHHHHHHHHHHHH
Confidence 68999999999999999999999999999999864210 0
Q ss_pred ----------------cHHHHHHH---H-----------hCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceE
Q psy8358 185 ----------------SLLEYFIQ---E-----------FGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNIL 234 (424)
Q Consensus 185 ----------------~l~~~~~~---~-----------~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIl 234 (424)
.+.+.|.+ . ...+++++|+.+|++|++|+|+||++||||||||||++|||
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~w~~~r~~f~~s~A~~s~~~yilglgDRh~~NIl 222 (307)
T cd05170 143 AHGLSLDVSRRDWPLSVLRQVLDELMQETPKDLLARELWCSSTTSSEWWSVTQRYARSTAVMSMIGYVIGLGDRHLDNVL 222 (307)
T ss_pred hhccccccchhhccHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCccEE
Confidence 00111110 0 12357889999999999999999999999999999999999
Q ss_pred Eec-CCcEEEEeccccccCCCCCCCCCCCCccccHHHHHHhCCCcchhhHHHHHHHHHHHHhcChhHHHHHHHHHhcCCC
Q psy8358 235 LSG-EGHLIHIDFGFILSLSPRNLGFETSPFKLTLEVVEVFGGVDMFCYFKILMLQGLIAARKHMDKILSLVEIMRSGSQ 313 (424)
Q Consensus 235 i~~-~G~~~HIDFg~~fg~~~~~~~~E~vPFrLT~~~~~~mg~~~~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~~~ 313 (424)
|++ ||+++|||||++|+.++.+..||.||||||++|+++||+.+.+|.|+..|+.++.+||++++.|++++++|++||.
T Consensus 223 i~~~tG~v~hiDf~~~f~~~~~l~~pE~VPFRLT~~~~~~lg~~g~~G~f~~~~~~~~~~Lr~~~~~l~~~l~~fv~DPl 302 (307)
T cd05170 223 IDLKTGEVVHIDYNVCFEKGKSLRIPEKVPFRMTQNIETALGLTGVEGVFRLSCEQVLHIMRRGRETLLTLLEAFVYDPL 302 (307)
T ss_pred EEcCCCcEEEEeeHhhhcccCCCCCCCCCCeeeCHHHHHHhCCCCCchhHHHHHHHHHHHHHcCHHHHHHHHHHHhhCcc
Confidence 996 9999999999999999877778999999999999999999999999999999999999999999999999999987
Q ss_pred Ccc
Q psy8358 314 LPC 316 (424)
Q Consensus 314 lp~ 316 (424)
+.|
T Consensus 303 ~~W 305 (307)
T cd05170 303 VDW 305 (307)
T ss_pred ccc
Confidence 776
No 28
>smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain. Phosphoinositide 3-kinase isoforms participate in a variety of processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, and apoptosis. These homologues may be either lipid kinases and/or protein kinases: the former phosphorylate the 3-position in the inositol ring of inositol phospholipids. The ataxia telangiectesia-mutated gene produced, the targets of rapamycin (TOR) and the DNA-dependent kinase have not been found to possess lipid kinase activity. Some of this family possess PI-4 kinase activities.
Probab=100.00 E-value=1.9e-58 Score=431.49 Aligned_cols=193 Identities=46% Similarity=0.761 Sum_probs=184.9
Q ss_pred EEEEecCCchhhHHHHHHHHHHHHHHHHhCC----CCceeecceEEEecCCCceeeeeCCcccHHHHHhhccccHHHHHH
Q psy8358 116 AAIVKSGDDLRQELLASQLLTLLQKIWDIER----VPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKNSQVSLLEYFI 191 (424)
Q Consensus 116 ~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~----~~l~l~~Y~vip~~~~~GlIE~v~~~~tl~~i~~~~~~~l~~~~~ 191 (424)
.+|+|+|||||||+|+||++++||.+|++++ ++++++||.|+|+|+++|+||||+|+.|+++| +.+||.
T Consensus 1 ~~~~K~~dDlR~D~~~~ql~~~~n~il~~~~e~~~~~l~~~~y~vip~~~~~GlIE~v~~~~sl~~i-------l~~~~~ 73 (202)
T smart00146 1 AVIFKGGDDLRQDERVLQLLRLMNKILQKDGETRRRDLHLRPYKVIPTGPKSGLIEVVPNSTTLHQI-------LYDWFK 73 (202)
T ss_pred CeeecCCCcccHHHHHHHHHHHHHHHHHhCcccccCceEeeeeEEEEcCCCcceEEEcCCchhHHHH-------HHHHHH
Confidence 3799999999999999999999999999886 99999999999999999999999999999999 889999
Q ss_pred HHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEecCCcEEEEeccccccCCCCCCCC-CCCCccccHHH
Q psy8358 192 QEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSGEGHLIHIDFGFILSLSPRNLGF-ETSPFKLTLEV 270 (424)
Q Consensus 192 ~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~~G~~~HIDFg~~fg~~~~~~~~-E~vPFrLT~~~ 270 (424)
+.+++ +..|+++|++|++|+|+||++||+|||||||++||||+++|+++|||||++|+++|++..+ |+||||||++|
T Consensus 74 ~~~~~--~~~~~~~~~~F~~SlA~~s~~~YilglgDRh~~NIli~~~G~v~hIDfg~~~~~~~~~~~~~e~vPFRLT~~~ 151 (202)
T smart00146 74 KKFPD--PEDYFEARKNFTRSCAGYSVITYILGLGDRHNDNIMLDKTGHLFHIDFGFILGNGPKLFGFPERVPFRLTPEM 151 (202)
T ss_pred HHCcC--HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEeCCCCEEEEechhhhCccccCCCCCCCCCeecCHHH
Confidence 98864 5689999999999999999999999999999999999999999999999999999998887 99999999999
Q ss_pred HHHhCCCcchhhHHHHHHHHHHHHhcChhHHHHHHHHHhcCCCCcccc
Q psy8358 271 VEVFGGVDMFCYFKILMLQGLIAARKHMDKILSLVEIMRSGSQLPCFK 318 (424)
Q Consensus 271 ~~~mg~~~~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~~~lp~~~ 318 (424)
+++||+.+.+|.|+..|+.++.+||+|.+.|++++++|++|+ +||+.
T Consensus 152 ~~~lg~~~~~g~F~~~~~~~~~~Lr~~~~~i~~~l~~~~~d~-l~~~~ 198 (202)
T smart00146 152 VDVMGDSGYFGLFRSLCERALRALRKNSNLIMSLLELMLYDG-LPDWR 198 (202)
T ss_pred HHHhCCCcccchHHHHHHHHHHHHHcCHHHHHHHHHHHcCCC-Chhhc
Confidence 999999999999999999999999999999999999999986 57766
No 29
>COG5032 TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion]
Probab=100.00 E-value=1.4e-57 Score=535.55 Aligned_cols=290 Identities=37% Similarity=0.599 Sum_probs=264.1
Q ss_pred CCceEEeecCCcceeccCCCCCcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHH
Q psy8358 62 QPHHIVRIPPSAAAVLNSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKI 141 (424)
Q Consensus 62 ~~~~i~~i~~~~~~v~~S~~k~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i 141 (424)
|.+.|.++.|+.. +++|+...|..+++. | +||+.|++++|+|||||||+++||++.+||++
T Consensus 1763 ~~v~I~~f~p~~~-~~~~~~~~p~rl~~r----------------g--sdG~~y~~i~K~~dDlRQD~~~~Ql~~l~n~i 1823 (2105)
T COG5032 1763 PFVLIERFEPEVS-VVKSHLQRPRRLTIR----------------G--SDGKLYSFIVKGGDDLRQDELALQLIRLMNKI 1823 (2105)
T ss_pred CCceEEEecCcee-eeecccccceEEEEE----------------e--cCCcEEEEEeecCccchHHHHHHHHHHHHHHH
Confidence 4688999998654 456644679998875 3 58899999999999999999999999999999
Q ss_pred HHhCC----CCceeecceEEEecCCCceeeeeCCcccHHHHHhhc-----------------------------------
Q psy8358 142 WDIER----VPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKNS----------------------------------- 182 (424)
Q Consensus 142 ~~~~~----~~l~l~~Y~vip~~~~~GlIE~v~~~~tl~~i~~~~----------------------------------- 182 (424)
|++++ |+++++||+|+|||+++|+||||||+.|+++|.+++
T Consensus 1824 L~~~~~~~~R~l~i~~Y~Vipls~~~GiIe~vpn~~tl~sI~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1903 (2105)
T COG5032 1824 LKKDKETRRRDLWIRPYKVIPLSPGSGIIEWVPNSDTLHSILREYHKRKNISIDQEKKLAARLDNLKLLLKDEFFTKATL 1903 (2105)
T ss_pred HHhChHhhhcCccceeeeeEeccCCcceEEEecCcchHHHHHHHHhhhcCCChhHHhhhhhhhhhhcccchhHHhhhhhc
Confidence 98875 599999999999999999999999999999997542
Q ss_pred --cccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEec-CCcEEEEeccccccCCCCCCCC
Q psy8358 183 --QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSG-EGHLIHIDFGFILSLSPRNLGF 259 (424)
Q Consensus 183 --~~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~-~G~~~HIDFg~~fg~~~~~~~~ 259 (424)
++.+++||.+.|++ +..|+.+|+||++|+|+|||+||+||+|||||+|||||+ +||++|||||++|+..|+.+++
T Consensus 1904 ~~~~~l~~~f~~~f~~--~~~w~~aR~Ny~~SlA~ySvigYiLglgDRH~~NIliD~~sG~viHiDFg~il~~~p~~~~~ 1981 (2105)
T COG5032 1904 KSPPVLYDWFSESFPN--PEDWLTARTNFARSLAVYSVIGYILGLGDRHPGNILIDRSSGHVIHIDFGFILFNAPGRFPF 1981 (2105)
T ss_pred CCCchHHHHHHHhcCC--hhhHHHHHHHHHHHHHHHHHHHHHccCCCcCCceEEEEcCCCcEEEehHHHHHhcCCCCCCC
Confidence 13578888888854 779999999999999999999999999999999999999 9999999999999999999887
Q ss_pred -CCCCccccHHHHHHhCCCcchhhHHHHHHHHHHHHhcChhHHHHHHHHHhcCC-----CCcccccc-hhhHHhhhhhcc
Q psy8358 260 -ETSPFKLTLEVVEVFGGVDMFCYFKILMLQGLIAARKHMDKILSLVEIMRSGS-----QLPCFKSG-AATVQNLKNRFH 332 (424)
Q Consensus 260 -E~vPFrLT~~~~~~mg~~~~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~~-----~lp~~~~~-~~~i~~l~~r~~ 332 (424)
|.||||||++|+++||+.+.+|.|+.+|+.++.+||+|++.|++++++|++|| ..||++.+ ..++.++.+||.
T Consensus 1982 pE~vPFrLT~~iv~~mg~~g~EG~Fr~~c~~~~~~LRk~~~~L~~~le~f~~d~l~~W~~~p~~~~~~~~~~~~v~~rf~ 2061 (2105)
T COG5032 1982 PEKVPFRLTRNIVEAMGVSGVEGSFRELCETAFRALRKNADSLMNVLELFVRDPLIEWRRLPCFREIQNNEIVNVLERFR 2061 (2105)
T ss_pred cccCcHhhhHHHHHhcCccchhhHHHHHHHHHHHHHhccHHHHHHHHHHHhcCcchhhhcCccccchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998 88888733 456777889999
Q ss_pred cCccHHHHHHHHHHHHHHhhhcccchhhhhhHHHhhcchh
Q psy8358 333 MNLTEEQLQVLIDKLVDSSIHSLSTKLYDGFQYYTNAFQY 372 (424)
Q Consensus 333 l~~s~~eA~~~~~~lI~~S~~~~~t~~~d~~Q~~~nGI~~ 372 (424)
.++++.++..++.-.|++++.+..++.||.+|..++||-|
T Consensus 2062 ~kl~~~~~~~~~~l~I~~sv~~li~~a~d~~~L~~~yi~w 2101 (2105)
T COG5032 2062 LKLSEKDAEKFVDLLINKSVESLITQATDPFQLATMYIGW 2101 (2105)
T ss_pred HHhhhhhhhhhcCCcHHHHHHHHHHHHcCHHHHHhhcccc
Confidence 9999999999999999999999999999999999999865
No 30
>KOG0892|consensus
Probab=100.00 E-value=8.6e-56 Score=501.22 Aligned_cols=328 Identities=22% Similarity=0.345 Sum_probs=254.9
Q ss_pred CCCceecCCCCCCC----ceEEeecCCcceeccCCCCCcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEe-cCCc
Q psy8358 50 LPARVWLPLYSDQP----HHIVRIPPSAAAVLNSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVK-SGDD 124 (424)
Q Consensus 50 lp~~~~lP~~~~~~----~~i~~i~~~~~~v~~S~~k~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K-~gdD 124 (424)
.|+++.+|.++.+. ..|.++. ++..+.. .-.+|.++.+- | ++|+.+.-++| ++||
T Consensus 2423 ~~pT~ev~v~~s~~~~~~p~i~s~~-~~v~~~~-GinaPkiI~c~----------------g--SDG~~~kqLVK~gnDD 2482 (2806)
T KOG0892|consen 2423 PPPTMNVKVNDSGDYGNIPTVVSFD-DTVTFAG-GINAPKVITCV----------------G--SDGKTYKQLVKGGNDD 2482 (2806)
T ss_pred CCCCCCccccCCcccCCCceEEecc-cceeeec-CccCCeEEEEE----------------c--cCchhHHHHHhcccch
Confidence 34556666665322 3566666 4555555 66889999875 3 57788999999 6799
Q ss_pred hhhHHHHHHHHHHHHHHHHh----CCCCceeecceEEEecCCCceeeeeCCcccHHHHHh-----h--------------
Q psy8358 125 LRQELLASQLLTLLQKIWDI----ERVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKK-----N-------------- 181 (424)
Q Consensus 125 LRqD~~~~Q~~~~~~~i~~~----~~~~l~l~~Y~vip~~~~~GlIE~v~~~~tl~~i~~-----~-------------- 181 (424)
||||+.|.|+|.++|.+|.. .+++|.|+||+|||++++.|+||||.||+|++++.- .
T Consensus 2483 LRQDAVMeQvF~~vN~lL~~~~et~krkL~irTYKVvPls~~sGvlEwv~~tiplgeyLv~~~~gah~ry~p~d~s~~~c 2562 (2806)
T KOG0892|consen 2483 LRQDAVMEQVFGQVNTFLQNDRETRKRKLSIRTYKVIPLSPKAGVLEWVTNTIPLGEYLVVESGGAHKRYRPNDWSLSKC 2562 (2806)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHhcccceeEEeeeecCcccceeecccCCeehhhhhcccCCccccccCCCCCChHHH
Confidence 99999999999999999965 479999999999999999999999999999999864 1
Q ss_pred -------------------------ccccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEe
Q psy8358 182 -------------------------SQVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLS 236 (424)
Q Consensus 182 -------------------------~~~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~ 236 (424)
.++.++.||.++|. +|..|+++|.+||+|.|+.||+|||||+||||..|||||
T Consensus 2563 rk~m~~~q~k~~E~r~k~y~~vc~n~~PvfryFflEkF~--dP~~WFekrlaYTrsvA~sS~VGyILGLGDRH~qNILid 2640 (2806)
T KOG0892|consen 2563 RKLMSEVQKKSLETRLKAYDKVCRNIRPVFRYFFLEKFP--DPADWFEKRLAYTRSVAASSMVGYILGLGDRHGQNILID 2640 (2806)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHhhchHHHHHHHHHhcC--CHHHHHHHHHHHHHhHHHHHHHHHHhcccchhhhheeec
Confidence 11346678888885 467999999999999999999999999999999999999
Q ss_pred c-CCcEEEEeccccccCCCCCCCCCCCCccccHHHHHHhCCCcchhhHHHHHHHHHHHHhcChhHHHHHHHHHhcCCCCc
Q psy8358 237 G-EGHLIHIDFGFILSLSPRNLGFETSPFKLTLEVVEVFGGVDMFCYFKILMLQGLIAARKHMDKILSLVEIMRSGSQLP 315 (424)
Q Consensus 237 ~-~G~~~HIDFg~~fg~~~~~~~~E~vPFrLT~~~~~~mg~~~~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~~~lp 315 (424)
. ||++||||+|.+|+.|+.+..||+||||||+++|++||.+|++|.||++|+.++.+||++.+.++++++++++||
T Consensus 2641 ~~taEviHIDlGiAFEQGkilptPE~VPFRLTRDiVdgmGItGveGvFrRccE~t~~vlR~~~~~lltileVl~yDP--- 2717 (2806)
T KOG0892|consen 2641 QQTAEVIHIDLGIAFEQGKILPTPETVPFRLTRDIVDGMGITGVEGVFRRCCEFTLEVLRREKESLLTILEVLLYDP--- 2717 (2806)
T ss_pred ccccceEEEeeeeehhcCCcCCCCCcccceeehhhccccCccCchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcc---
Confidence 7 999999999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred ccccchhhHHhhhhhcccCccHHHHHHHHHHHHHHhhhcccchhhhhhHHHhhcchhhhHHHHHhhhhcCCCC--CHHHH
Q psy8358 316 CFKSGAATVQNLKNRFHMNLTEEQLQVLIDKLVDSSIHSLSTKLYDGFQYYTNAFQYIAATVQNLKNRFHMNL--TEEQL 393 (424)
Q Consensus 316 ~~~~~~~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~~~~~t~~~d~~Q~~~nGI~~~~~~i~~Lr~Rf~~~l--se~qv 393 (424)
.|.|....++++...+.. +++-.. ++..++...++ |. .-+.+ .-++-++|.++-...+ +|+||
T Consensus 2718 Lf~W~msplK~~~~q~~e---~~e~~n-~~~~~~~~~~n------d~--~a~r~---l~r~q~kl~g~e~g~~~sVe~qv 2782 (2806)
T KOG0892|consen 2718 LFSWLMSPLKALKKQKEE---DEENFN-LSGNITEDASN------DR--NAVRA---LMRAQRKLDGVEQGTMLSVEAQV 2782 (2806)
T ss_pred hHHHhhcHHHHHHHHHhh---cchhcc-cccchhhhhcc------ch--HHHHH---HHHHHHHhhhhhccccccHHHHH
Confidence 555554445544433221 111111 11111111100 00 00001 1133344444444443 59999
Q ss_pred HHHHHHHhhcccccccccccccccccc
Q psy8358 394 QVLIDKLVDTSIHSLSTKLYDGFQYYT 420 (424)
Q Consensus 394 ~~~i~~~id~s~~~~~tk~Yd~~q~~t 420 (424)
+.+|++|||||+ ++.+|.||.++.
T Consensus 2783 ~~LIqqA~dpsn---Ls~~fpGW~a~~ 2806 (2806)
T KOG0892|consen 2783 QELIQQATDPSN---LSLMFPGWSAFQ 2806 (2806)
T ss_pred HHHHHHhcCchh---hhhhcCCCcCcC
Confidence 999999999977 699999999873
No 31
>cd05163 TRRAP TRansformation/tRanscription domain-Associated Protein (TRRAP), pseudokinase domain; The TRRAP catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. TRRAP shows some similarity to members of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily in that it contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain and has a large molecular weight. Unlike PIKK proteins, however, it contains an inactive PI3K-like pseudokinase domain, which lacks the conserved residues necessary for ATP binding and catalytic activity. TRRAP also contains many motifs that may be critical for protein-protein interactions. TRRAP is a common component of many histone acetyltransferase (HAT) complexes, and is responsible for the recruitment of these complexes to chromatin during transcription, replicat
Probab=100.00 E-value=3.4e-53 Score=407.82 Aligned_cols=229 Identities=17% Similarity=0.233 Sum_probs=204.4
Q ss_pred eecCCcceeccCCCCCcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEe--cCCchhhHHHHHHHHHHHHHHHHh-
Q psy8358 68 RIPPSAAAVLNSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVK--SGDDLRQELLASQLLTLLQKIWDI- 144 (424)
Q Consensus 68 ~i~~~~~~v~~S~~k~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K--~gdDLRqD~~~~Q~~~~~~~i~~~- 144 (424)
++.|+--.|..|+. .|..+++. | +||+.|.|++| +++|+|+|+|+||+++++|.+|++
T Consensus 3 rf~p~~~iv~~~~~-~pkri~i~----------------g--sdG~~y~fLvk~~~~~d~R~d~Ri~Ql~~liN~~l~~~ 63 (253)
T cd05163 3 RFLPTVEIVRGHGY-CYRRLTIR----------------G--HDGSIYPFLVQYPAARQARREERVLQLFRTLNSVLSKN 63 (253)
T ss_pred ccCCeEEEEccCCC-cCcEEEEE----------------C--CCCCEEEEEEecCCchhHHHHHHHHHHHHHHHHHHhcC
Confidence 45555455667774 46666653 4 58899999999 578999999999999999999964
Q ss_pred ---CCCCceeecceEEEecCCCceeeeeCCcccHHHHHhh-------------ccccHHHHHHHHhCCCChHHHHHHHHH
Q psy8358 145 ---ERVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKN-------------SQVSLLEYFIQEFGDINSEGFLAAQKN 208 (424)
Q Consensus 145 ---~~~~l~l~~Y~vip~~~~~GlIE~v~~~~tl~~i~~~-------------~~~~l~~~~~~~~~~~~~~~~~~~r~~ 208 (424)
.++++.+++|.|+|+++++|||||++++.|+.++.+. .++.|.+||.+.+. ++++|+.+|++
T Consensus 64 ~et~~r~l~i~~y~viPLs~~~gLie~~~~~~tl~~i~~~~~~~~~~i~~~~~p~~~l~~~~~~~~~--~~~~~~~~r~~ 141 (253)
T cd05163 64 KETRRRNLQFTLPLVVPLSPQIRLVEDDPSYISLQEIYEDKLEIYNEIQKDMVPDTILKNYILSTFP--TYQDYWLFRKQ 141 (253)
T ss_pred HHHHhCcccccceeEEEcCCccceEEECCCCccHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHCC--CHHHHHHHHHH
Confidence 4689999999999999999999999999999998742 12368899999885 57899999999
Q ss_pred HHHHhhHHHHHHHHhccCCCCCCceEEec-CCcEEEEeccccccCCCCCC-CCCCCCccccHHHHHHhCCCcchhhHHHH
Q psy8358 209 FVQSTAAYSLVCYLLQVKDRHNGNILLSG-EGHLIHIDFGFILSLSPRNL-GFETSPFKLTLEVVEVFGGVDMFCYFKIL 286 (424)
Q Consensus 209 F~~SlA~~sv~~yiLgigDRH~~NIli~~-~G~~~HIDFg~~fg~~~~~~-~~E~vPFrLT~~~~~~mg~~~~~~~f~~~ 286 (424)
|++|+|++|++|||||+||||++||||+. ||+++|||||+.|+++...+ .||.|||||||+|+++||+.+.+|.|+..
T Consensus 142 ft~s~A~~s~~gYilglgdRh~~nili~~~tG~v~hiDf~~~f~~~~~~~~~pE~VPFRLT~ni~~~~g~~g~eG~f~~~ 221 (253)
T cd05163 142 FTYQLALLSFMTYILSINNRNPDKIFISRDTGNVYQSDLLPSINNNKPLFHNNEPVPFRLTPNIQHLIGPIGLEGILTSS 221 (253)
T ss_pred HHHHHHHHHHHHHHhcCCCCCchhEEEEcCCCcEEEEeeeeeecCCCcCCCCCCcCCcccCHHHHHHhCCcCcCCcHHHH
Confidence 99999999999999999999999999997 99999999999999998764 78999999999999999999999999999
Q ss_pred HHHHHHHHhcChhHHHHHHHHHhcCCCCccc
Q psy8358 287 MLQGLIAARKHMDKILSLVEIMRSGSQLPCF 317 (424)
Q Consensus 287 ~~~~~~~LR~~~~~i~~ll~~~~~~~~lp~~ 317 (424)
|+.++.+||++.+.|++++++|++||.+.|.
T Consensus 222 ~~~~~~~Lr~~~~~l~~~L~~fi~Dpl~~W~ 252 (253)
T cd05163 222 MMAIARCLTEPEFDLENALQLFIRDELIAWH 252 (253)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHcChhhhhc
Confidence 9999999999999999999999999888775
No 32
>PF00454 PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kinase; InterPro: IPR000403 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Phosphatidylinositol 3-kinase (PI3-kinase) (2.7.1.137 from EC) [] is an enzyme that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring. The three products of PI3-kinase - PI-3-P, PI-3,4-P(2) and PI-3,4,5-P(3) function as secondary messengers in cell signalling. Phosphatidylinositol 4-kinase (PI4-kinase) (2.7.1.67 from EC) [] is an enzyme that acts on phosphatidylinositol (PI) in the first committed step in the production of the secondary messenger inositol-1'4'5'-trisphosphate. This domain is also present in a wide range of protein kinases, involved in diverse cellular functions, such as control of cell growth, regulation of cell cycle progression, a DNA damage checkpoint, recombination, and maintenance of telomere length. Despite significant homology to lipid kinases, no lipid kinase activity has been demonstrated for any of the PIK-related kinases []. The PI3- and PI4-kinases share a well conserved domain at their C-terminal section; this domain seems to be distantly related to the catalytic domain of protein kinases [, ]. The catalytic domain of PI3K has the typical bilobal structure that is seen in other ATP-dependent kinases, with a small N-terminal lobe and a large C-terminal lobe. The core of this domain is the most conserved region of the PI3Ks. The ATP cofactor binds in the crevice formed by the N-and C-terminal lobes, a loop between two strands provides a hydrophobic pocket for binding of the adenine moiety, and a lysine residue interacts with the alpha-phosphate. In contrast to protein kinases, the PI3K loop which interacts with the phosphates of the ATP and is known as the glycine-rich or P-loop, contains no glycine residues. Instead, contact with the ATP -phosphate is maintained through the side chain of a conserved serine residue.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 2WXL_A 4AJW_B 2WXQ_A 2WXP_A 2WXM_A 2WXH_A 2WXK_A 2WXG_A 2X38_A 2WXF_A ....
Probab=100.00 E-value=5.2e-53 Score=402.97 Aligned_cols=200 Identities=38% Similarity=0.559 Sum_probs=166.2
Q ss_pred eEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceEEEecCCCceeeeeCCcccHHHHHhhcc----------
Q psy8358 114 LMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKNSQ---------- 183 (424)
Q Consensus 114 ~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~~~~GlIE~v~~~~tl~~i~~~~~---------- 183 (424)
.|++|+|+|||||||+++||++++||.+|++++...+++||.|+|+++++|+||||+++.|+.+|.++..
T Consensus 1 ~y~~l~K~~dDlr~D~~~~ql~~~~n~~l~~~~~~~~~~~Y~vipls~~~Glie~v~~~~tl~~i~~~~~~~~~~~~~~~ 80 (235)
T PF00454_consen 1 EYSFLVKGGDDLRQDERVMQLFRLMNRILKKEGETREIRTYRVIPLSPNCGLIEWVPNTITLQEIYKTYCVRIGHSNDNP 80 (235)
T ss_dssp -EEEEEEESS-CHHHHHHHHHHHHHHHHHHHTT---------EEEEETTEEEEE--TTEEEHHHHHHHSTTSSTTTCSC-
T ss_pred CceEEEECCchhhchhHHHHHHHHHHHHHhcCCCCceEEEeEEEecCCCCceeEEeccccchhHhhcccccccccccccc
Confidence 3899999999999999999999999999999999999999999999999999999999999999987641
Q ss_pred ------------------ccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEe-cCCcEEEE
Q psy8358 184 ------------------VSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLS-GEGHLIHI 244 (424)
Q Consensus 184 ------------------~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~-~~G~~~HI 244 (424)
..+.+||...+. +++.|+++|++|+.|+|+||+++|++|+||||++||||+ .+|+++||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~--~~~~~~~~r~~f~~sla~~si~~yilg~gDRh~~Nili~~~~g~~~hI 158 (235)
T PF00454_consen 81 SRKYKAKLFEKQSSKVPKDGLRQYFLKSFP--SAEEWFEARKNFTRSLAAYSILDYILGLGDRHPGNILIDKKTGELIHI 158 (235)
T ss_dssp -----------------TTHHHHHHHHHSC--TTHHHHHHHHHHHHHHHHHHHHHHHHT-CS--TTTEEE-ETTSEEEE-
T ss_pred ccccccccccccccccccchHHHHHHhcCC--ChhhhHhhhHhhHHHHHHHhhceEEEeecCCCchhheeccccceeeeE
Confidence 347889988774 467899999999999999999999999999999999996 49999999
Q ss_pred eccccccCCCCCCCCCCCCccccHHHHHHh----CCCcchhhHHHHHHHHHHHHhcChhHHHHHHHHHhcCCCCcc
Q psy8358 245 DFGFILSLSPRNLGFETSPFKLTLEVVEVF----GGVDMFCYFKILMLQGLIAARKHMDKILSLVEIMRSGSQLPC 316 (424)
Q Consensus 245 DFg~~fg~~~~~~~~E~vPFrLT~~~~~~m----g~~~~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~~~lp~ 316 (424)
|||++|+ ++....+|.||||||++|+++| |+.+.+|.|+..|+.++.+||+|.+.|++++++|++||.+.|
T Consensus 159 Dfg~~f~-~~~~~~~e~vPFrLT~~~~~~~~~~l~~~~~~g~f~~~~~~~~~~lr~~~~~l~~ll~~~~~d~l~~w 233 (235)
T PF00454_consen 159 DFGFIFG-GKHLPVPETVPFRLTRNMVNAMGGYLGPSGVEGLFRSSCEAILRALRRNKDLLLSLLELFLRDPLIDW 233 (235)
T ss_dssp -HSSCTT-HHHGSSSS--SSTTHHHHHHHTTTSSSTSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTTSCSTTS
T ss_pred EeHHhhh-ccccCCCCCCCeEeCHHHHHHHhccCCCchhHhHHHHHHHHHHHHHhcChHHHHHHHHHHHhCCCCCC
Confidence 9999999 6666778999999999999999 777999999999999999999999999999999999976655
No 33
>PTZ00303 phosphatidylinositol kinase; Provisional
Probab=100.00 E-value=2.2e-42 Score=356.41 Aligned_cols=288 Identities=21% Similarity=0.273 Sum_probs=216.9
Q ss_pred cCCCCceecCCCCCCCceEEeecCCcceeccCCCCCcEEEEecCcchhhhh-------------------------hhh-
Q psy8358 48 HNLPARVWLPLYSDQPHHIVRIPPSAAAVLNSKDKAPYIIYCEEPWSKKEA-------------------------RIR- 101 (424)
Q Consensus 48 ~~lp~~~~lP~~~~~~~~i~~i~~~~~~v~~S~~k~p~~~~~~~~~~~k~~-------------------------~~~- 101 (424)
..+|.++..|++| ++.+.+|+...++++.|++..|.|+.|. .|...+. |-.
T Consensus 932 ~~~~~pil~pf~~--~ivl~~i~l~gikv~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1374)
T PTZ00303 932 IDLPHPILNPFKP--YIVLKSIRLSGVKVAPNAASKPTWLAFS-TWSAAEHLERDTMTAANNFGAHTLPTGESHAERSGE 1008 (1374)
T ss_pred cCCCcccccCCCc--ceeEEeeeccCeEeccccccCcchhhcc-chhhhhhhhhhcccccccccccccccccchhhhccc
Confidence 3577788889977 8899999999999999997778888876 2322110 000
Q ss_pred ----------------cCCCCC---cCCCc-----------ceEEEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCcee
Q psy8358 102 ----------------QSSPYG---HIPSW-----------RLMAAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLIL 151 (424)
Q Consensus 102 ----------------~~~~~g---~~~~~-----------~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l 151 (424)
.+.|.- ...+| +.+.+|||.| ||||||+++|+|++|+++|+++++||.|
T Consensus 1009 ~~~~~~~~~~~~~~~~~~~pv~~p~~~~~gvs~~~~~~~~~q~~~iIyK~g-DLRQDQLVLQmIrLMDrLLKkEnLDLKL 1087 (1374)
T PTZ00303 1009 GREKGTGAAKTYTSTKTSAPVTSPVTAVNGVSPESLHDSLPQECMFLYKRE-NVERDQLMCISSRLLQMLLSSEIGNAEM 1087 (1374)
T ss_pred ccccccCCCccccccccccceeeeeeccCCcCccccccccchheeEEEecC-cHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 000000 00122 3489999986 9999999999999999999999999999
Q ss_pred ecceEEEecCCCceeeeeCCcccHHHHHhhccccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCC
Q psy8358 152 HPYKILCLSNDSGLIEPILNTVSLHQIKKNSQVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNG 231 (424)
Q Consensus 152 ~~Y~vip~~~~~GlIE~v~~~~tl~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~ 231 (424)
+||+|+|||.+.|+||+|++ .++.+|.+ ..+.+||.. .. + ....||++|||+|||+||||||||||||
T Consensus 1088 TPYRVLATG~dsGLIEfVps-~tLAsI~~---~~Il~YLr~--~~--t----~~~~NFi~S~AGYsViTYILgIgDRHng 1155 (1374)
T PTZ00303 1088 LDYSVLPLSCDSGLIEKAEG-RELSNLDN---MDIASYVLY--RG--T----RSCINFLASAKLFLLLNYIFSIGDRHKG 1155 (1374)
T ss_pred cceEEEeccCCcccEEEecc-hHHHHhhh---hHHHHHHHh--cC--c----HHHHHHHHHHHHHHHHHHHhccCcccCC
Confidence 99999999999999999986 47888865 358899873 22 1 2368999999999999999999999999
Q ss_pred ceEEecCCcEEEEeccccccCCCCCCCCCCCCccccHHHHHHhCCC----------------------------------
Q psy8358 232 NILLSGEGHLIHIDFGFILSLSPRNLGFETSPFKLTLEVVEVFGGV---------------------------------- 277 (424)
Q Consensus 232 NIli~~~G~~~HIDFg~~fg~~~~~~~~E~vPFrLT~~~~~~mg~~---------------------------------- 277 (424)
||||+.+||+||||||||||+.+-.-.+-+.|.|+..+|...+++.
T Consensus 1156 NILId~dGhLfHIDFGFILg~rtfkeKl~~s~vR~D~~l~eav~~~q~~~~~~~~~~~~~~~~~~~~g~~s~~~~s~~~~ 1235 (1374)
T PTZ00303 1156 NVLIGTNGALLHIDFRFIFSEKTFVEKLARSTVRIDDAFLAAVEQCQQRQCSCFAGPSPAATSSRARGCASPPGSSGSGG 1235 (1374)
T ss_pred ceeEcCCCCEEEEecceeecCchhhhccCCCceehhHHHHHHHHHHHhhhcccccCCCCccccccccCCCCCCCCCCCCC
Confidence 9999999999999999999988722223368899999998876421
Q ss_pred ----------------cchhhHHHHHHHHHHHHhcChhHHHHHHHHHhcCCCCcccccchhhHHhhhhhcccCccHHHHH
Q psy8358 278 ----------------DMFCYFKILMLQGLIAARKHMDKILSLVEIMRSGSQLPCFKSGAATVQNLKNRFHMNLTEEQLQ 341 (424)
Q Consensus 278 ----------------~~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~~~lp~~~~~~~~i~~l~~r~~l~~s~~eA~ 341 (424)
+....|-....+.|.-+|.++..+..|+.-.++...+|... .+-..-+.--|+-..+++...
T Consensus 1236 ~~~pa~p~~~~e~ss~~~~~~f~~~aa~wf~~vrp~a~i~~~l~~~~v~r~~~~~~~--~e~~~~~nt~f~r~as~~s~~ 1313 (1374)
T PTZ00303 1236 CGSPASPTKAPEPSSAEIREAFFSSAAEWFVHVRPFAAVFYELWLYAVHRHTVPYND--AEMLNMLNTLFDRHASQTSSA 1313 (1374)
T ss_pred cCCCCCcccCCCCcchHHHHHHHHHHhhHheeechHHHHHHHHHHHHHHHhcCCccH--HHHHHHHHHHHHHHHHhhhhH
Confidence 11233444455667778999999888887777666677322 233333444455566777778
Q ss_pred HHHHHHHHHhhh
Q psy8358 342 VLIDKLVDSSIH 353 (424)
Q Consensus 342 ~~~~~lI~~S~~ 353 (424)
..|..-+++|.+
T Consensus 1314 ~~f~~~~k~s~~ 1325 (1374)
T PTZ00303 1314 SKFSTTMKESVN 1325 (1374)
T ss_pred HHHHHHHHHhcC
Confidence 888877778776
No 34
>KOG0891|consensus
Probab=100.00 E-value=3.3e-36 Score=349.25 Aligned_cols=246 Identities=26% Similarity=0.372 Sum_probs=206.0
Q ss_pred eecCCCCCCCceEEeec--CCcceeccCCCCCcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHH
Q psy8358 54 VWLPLYSDQPHHIVRIP--PSAAAVLNSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLA 131 (424)
Q Consensus 54 ~~lP~~~~~~~~i~~i~--~~~~~v~~S~~k~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~ 131 (424)
...|...+|...+++|. ..+..|+.|+.+ |..+.+ .| ++|+.|.++.|+++|+|||+|+
T Consensus 1944 l~vPgty~~~~~~i~i~~f~~~~~vitskqR-prkl~i----------------~g--s~g~d~~~~lkghed~rQD~Rv 2004 (2341)
T KOG0891|consen 1944 LAVPGTYDPGKPIIRIQSFEPKFNVITSKQR-PRKLVI----------------RG--SDGKDYQYLLKGHEDLRQDERV 2004 (2341)
T ss_pred eccCCccCCCceEEehhhccHHHHHHHHHhh-hHHHhh----------------cc--cchhhHHHHhhchhhhhhHHHH
Confidence 34466555555555543 246677778754 544332 24 5889999999999999999999
Q ss_pred HHHHHHHHHHHHhC----CCCceeecceEEEecCCCceeeeeCCcccHHHHHhhccc-----------------------
Q psy8358 132 SQLLTLLQKIWDIE----RVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKNSQV----------------------- 184 (424)
Q Consensus 132 ~Q~~~~~~~i~~~~----~~~l~l~~Y~vip~~~~~GlIE~v~~~~tl~~i~~~~~~----------------------- 184 (424)
||+|.+||.++..+ ++.+.+..|.++|++++.|+|+|||++.|++.+.+.+..
T Consensus 2005 mQLf~Lvn~ll~~d~~~~rr~L~iq~Y~~i~ls~~sgL~gWv~~~dtlh~L~r~~r~~k~i~l~~eh~~~~~~~l~~~~l 2084 (2341)
T KOG0891|consen 2005 MQLFGLVNTLLANDSETFRRNLTIQRYSVIPLSPDSGLIGWVPNCDTLHTLIREYREKKKIPLNIEHRVMLQMAPDYDHL 2084 (2341)
T ss_pred HHHHHHHHHHhccChHHHHHHHHHHHhhhcCCCCCCceeeeecccccHHHHHHHHHHhhccCCcchHHHHHhcCccccch
Confidence 99999999999764 678999999999999999999999999999998765310
Q ss_pred c------HHHH-----------HHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEec-CCcEEEEec
Q psy8358 185 S------LLEY-----------FIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSG-EGHLIHIDF 246 (424)
Q Consensus 185 ~------l~~~-----------~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~-~G~~~HIDF 246 (424)
. +.+| ..-.-++++++.|+..|.+|++|.|++|+++|++|+||||+.|.|+++ +|+++||||
T Consensus 2085 tl~qk~~vfe~~~~~t~G~dl~~~lwlkS~ssEaw~~rrt~yt~S~A~msmvgyilGlGdrhpsNlmldr~tgkvihidf 2164 (2341)
T KOG0891|consen 2085 TLMQKVEVFEYALSNTQGDDLYKVLWLKSPSSEAWLDRRTNYTRSLAVMSMVGYILGLGDRHPSNLMLDRLTGKVIHIDF 2164 (2341)
T ss_pred hhhhHHhHhHHHhhcCcHHHHHHHHHHhCCChhHHHHHhhhhHHHHHHHHHHHHHhhccccchhhhhhhhcccceEEech
Confidence 0 0011 001124678899999999999999999999999999999999999998 999999999
Q ss_pred cccccCCCCCC-CCCCCCccccHHHHHHhCCCcchhhHHHHHHHHHHHHhcChhHHHHHHHHHhcCCCCcccc
Q psy8358 247 GFILSLSPRNL-GFETSPFKLTLEVVEVFGGVDMFCYFKILMLQGLIAARKHMDKILSLVEIMRSGSQLPCFK 318 (424)
Q Consensus 247 g~~fg~~~~~~-~~E~vPFrLT~~~~~~mg~~~~~~~f~~~~~~~~~~LR~~~~~i~~ll~~~~~~~~lp~~~ 318 (424)
|.+|+...-.. .||.+|||||++++++|...+..|.|+..|+..+.++|.+.+.+++.++.|++||.+.|-.
T Consensus 2165 gdcfevA~~rek~pe~~pfRlTrmli~amev~gl~g~~~~t~e~v~~~lr~~~~sl~a~leafvydplinwr~ 2237 (2341)
T KOG0891|consen 2165 GDCFEVAMLREKFPEKVPFRLTRMLINAMEVTGIEGTYRITCEHVMRVLRTNKESLMAVLEAFVYDPLINWRL 2237 (2341)
T ss_pred HHHHHHHHhhccccccccHHHHHHHHHhHHHHhhhhHHHHHHHHHHHhhcCChHHHHHHHHhhhcccchhhhc
Confidence 99999999665 5699999999999999999999999999999999999999999999999999998777754
No 35
>KOG0889|consensus
Probab=99.64 E-value=4.3e-15 Score=174.85 Aligned_cols=207 Identities=19% Similarity=0.251 Sum_probs=180.0
Q ss_pred CCcceE--EEEEecCCchhhHHHHHHHHHHHHHHHHh----CCCCceeecceEEEecCCCceeeeeCCcccHHHHHhhc-
Q psy8358 110 PSWRLM--AAIVKSGDDLRQELLASQLLTLLQKIWDI----ERVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKNS- 182 (424)
Q Consensus 110 ~~~~~~--~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~----~~~~l~l~~Y~vip~~~~~GlIE~v~~~~tl~~i~~~~- 182 (424)
.+|+.| .+-.|+--+-|.++|++|+++++|..+.+ .++.+.+.+..++|+|+...++|..|++.|+++|++.+
T Consensus 3219 ~dGk~~~~~~~~~~~~~sRreErvlQL~r~lN~~l~~~~Et~rR~l~~~~p~~ipvs~q~rl~ed~ps~~tl~~I~~~~c 3298 (3550)
T KOG0889|consen 3219 SDGKIYPFAVQYPGLRNSRREERVLQLFRMLNESLGKNKETRRRHLEFKLPIVIPVSSQMRLVEDKPSSITLQEIYEEYC 3298 (3550)
T ss_pred cCCeecceeeecccCCCccHHHHHHHHHHHHHHHhccChhhhhhhcCccCceeeeccCceEEecCCcchhhHHHHHHHHH
Confidence 356667 56667667889999999999999999965 47889999999999999999999999999999998651
Q ss_pred ------------------------------------------------cccHHHHHHHHhCCCChHHHHHHHHHHHHHhh
Q psy8358 183 ------------------------------------------------QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTA 214 (424)
Q Consensus 183 ------------------------------------------------~~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA 214 (424)
...+.+|+.+.|++ +..++..|+.|+.++|
T Consensus 3299 ~~~~~~~D~~i~~~~d~l~~~~~~~~~~~~~~~lr~~i~e~i~~~~vp~sil~dy~~~tf~~--~~d~w~frk~f~~qla 3376 (3550)
T KOG0889|consen 3299 ARNNVSPDDPILLYFDRLAQAYSVLIGLTAAHQLRGQIFEDIQKTMVPRSILKDYFYKTFTN--YSDFWTFRKQFTDQLA 3376 (3550)
T ss_pred HhcCCCcchhhHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHhhCcHHHHHHHHHHhcCC--hhhhhhhHhHHHHHHH
Confidence 02367899999876 5689999999999999
Q ss_pred HHHHHHHHhccCCCCCCceEEec-CCcEEEEeccccccCCCCCCC-CCCCCccccHHHHHHhCCCcchhhHHHHHHHHHH
Q psy8358 215 AYSLVCYLLQVKDRHNGNILLSG-EGHLIHIDFGFILSLSPRNLG-FETSPFKLTLEVVEVFGGVDMFCYFKILMLQGLI 292 (424)
Q Consensus 215 ~~sv~~yiLgigDRH~~NIli~~-~G~~~HIDFg~~fg~~~~~~~-~E~vPFrLT~~~~~~mg~~~~~~~f~~~~~~~~~ 292 (424)
..++++|.+.++-|-++-+++++ +|.++--||-+-.......+. -|+|||||||++...+|..+++|.+...+..+.+
T Consensus 3377 ~~~~~~~~lni~~~~p~k~~~~~dsG~v~~~~~~~~~~~~~~~~~~~~~VpFRlTpni~~~i~~~~veg~l~~s~~a~ar 3456 (3550)
T KOG0889|consen 3377 VFSFMEYMLNINGRGPAKLTFAKDSGKVFNTDFLPSYISSKPIFHNNEPVPFRLTPNIQEFIGDFGVEGLLAGSMMAIAR 3456 (3550)
T ss_pred HHHHHHHHHhcCCCCccceeeeeccccccchhhccCcccCccccccCCcCCeeecCCchhhhcchhhhhhhHHHHHHHHH
Confidence 99999999999999999999998 999999999666644443333 3999999999999999999999999999999999
Q ss_pred HHhcChhHHHHHHHHHhcCCCCcccc
Q psy8358 293 AARKHMDKILSLVEIMRSGSQLPCFK 318 (424)
Q Consensus 293 ~LR~~~~~i~~ll~~~~~~~~lp~~~ 318 (424)
+|-++...+-..+.++++|..+.|++
T Consensus 3457 ~l~~p~~~l~~~l~~~~RDE~~~w~~ 3482 (3550)
T KOG0889|consen 3457 CLIEPDFELDPYLQLFFRDEIISWFK 3482 (3550)
T ss_pred HHhCCccchhHHHHHHHHHHHHHHhh
Confidence 99999999999999999987666665
No 36
>KOG0903|consensus
Probab=99.31 E-value=9.9e-13 Score=138.48 Aligned_cols=59 Identities=49% Similarity=0.826 Sum_probs=56.7
Q ss_pred hhHHHhhcchhhhHHHHHhhhhcCCCCCHHHHHHHHHHHhhccccccccccccccccccccCC
Q psy8358 362 GFQYYTNAFQYIAATVQNLKNRFHMNLTEEQLQVLIDKLVDTSIHSLSTKLYDGFQYYTNGIL 424 (424)
Q Consensus 362 ~~Q~~~nGI~~~~~~i~~Lr~Rf~~~lse~qv~~~i~~~id~s~~~~~tk~Yd~~q~~tngi~ 424 (424)
.++||..| ++|+++||+|||++|||+||+.+|+.+|++|+++|+||+||+|||+||||+
T Consensus 789 ~~pCF~aG----~~Ti~nL~~RFhLslTEeq~~~lV~~LI~kS~~S~~TrlYD~fQyitnGI~ 847 (847)
T KOG0903|consen 789 GMPCFRAG----ERTIQNLRQRFHLSLTEEQCQDLVLSLISKSLDSITTRLYDSFQYITNGIY 847 (847)
T ss_pred CCcccccC----hHHHHHHHHHhcccccHHHHHHHHHHHHhhcccchhhhhhHHHHHHhcccC
Confidence 57899888 589999999999999999999999999999999999999999999999996
No 37
>KOG0902|consensus
Probab=98.67 E-value=1.5e-08 Score=113.14 Aligned_cols=158 Identities=27% Similarity=0.426 Sum_probs=101.5
Q ss_pred HhhHHHHHHHHhccCCCCCCceEE---ec-CCcEEEEeccccccCCCCCCCCCCCCccccHHHHHHhCC-CcchhhHHHH
Q psy8358 212 STAAYSLVCYLLQVKDRHNGNILL---SG-EGHLIHIDFGFILSLSPRNLGFETSPFKLTLEVVEVFGG-VDMFCYFKIL 286 (424)
Q Consensus 212 SlA~~sv~~yiLgigDRH~~NIli---~~-~G~~~HIDFg~~fg~~~~~~~~E~vPFrLT~~~~~~mg~-~~~~~~f~~~ 286 (424)
.-=+-|+++|-+- -.++ |+ +|++.-=|=|++...+=+++ +|.+| || .+-+..|+-.
T Consensus 1638 ~NF~~S~A~Ysv~-------s~lLq~KDRHNGNim~Dd~G~~iHIDFGf~-~e~sP-----------Ggnl~fE~~fKLt 1698 (1803)
T KOG0902|consen 1638 YNFVRSMAGYSVL-------SYLLQIKDRHNGNIMIDDQGHIIHIDFGFM-FESSP-----------GGNLGFEPPFKLT 1698 (1803)
T ss_pred HHHHHHHHHHHHH-------HHHcccccccCCceeEccCCCEEEEeeeeE-EecCC-----------CCccCcCCCccch
Confidence 3345688999653 2455 35 99999989999999865433 57777 55 3333345422
Q ss_pred HHHHHHHHhcChhHHHHHHHHHhcCC-CCcccccchhhH-HhhhhhcccCccHHHHHHHHHHHHHHhhhcccchhhhhhH
Q psy8358 287 MLQGLIAARKHMDKILSLVEIMRSGS-QLPCFKSGAATV-QNLKNRFHMNLTEEQLQVLIDKLVDSSIHSLSTKLYDGFQ 364 (424)
Q Consensus 287 ~~~~~~~LR~~~~~i~~ll~~~~~~~-~lp~~~~~~~~i-~~l~~r~~l~~s~~eA~~~~~~lI~~S~~~~~t~~~d~~Q 364 (424)
= .+.++|=..+ .-||.....-.+ .+|+-|-.+ +.....++-+++. .++
T Consensus 1699 ~---------------Em~~~mgG~~~~~~f~~f~elcVk~yLA~R~~~----~~iv~~V~~mlds-----------gLP 1748 (1803)
T KOG0902|consen 1699 K---------------EMVMLMGGKMEAKPFKWFQELCVKGYLAARPYM----DAIVSLVQSMLDS-----------GLP 1748 (1803)
T ss_pred H---------------HHHHHhCCCCCCCcHHHHHHHHHHHHHhhchhH----HHHHHHHHHHHhc-----------CCC
Confidence 1 1112221000 111111011222 234444332 3344444444433 567
Q ss_pred HHhhcchhhhHHHHHhhhhcCCCCCHHHHHHHHHHHhhccccccccccccccccccccCC
Q psy8358 365 YYTNAFQYIAATVQNLKNRFHMNLTEEQLQVLIDKLVDTSIHSLSTKLYDGFQYYTNGIL 424 (424)
Q Consensus 365 ~~~nGI~~~~~~i~~Lr~Rf~~~lse~qv~~~i~~~id~s~~~~~tk~Yd~~q~~tngi~ 424 (424)
|| .| .+|.+||.||+++++|.|++.|+-.+|..++++|+|++||.+||+||||.
T Consensus 1749 Cf-rg-----~~i~nl~~RF~pemsereAa~fm~~vi~~~~~~~rt~~YD~~Q~~~n~I~ 1802 (1803)
T KOG0902|consen 1749 CF-RG-----QTIGNLRARFAPEMSEREAALFMLSVITDSYLKIRTKMYDQIQYLQNGIP 1802 (1803)
T ss_pred cc-Cc-----chHHHHHHhhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 77 44 69999999999999999999999999999999999999999999999994
No 38
>cd05167 PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), Type III, alpha isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. PI4KIIIalpha is a 220 kDa protein found in the plasma membrane and the endoplasmic reticulum (ER). The role of PI4KIIIalpha in the ER remains unclear. In the plasma membrane, it provides PtdIns(4)P, which is then converted by PI5Ks to PtdIns(4,5)P2, an important signaling mole
Probab=98.47 E-value=6.3e-08 Score=95.99 Aligned_cols=50 Identities=38% Similarity=0.604 Sum_probs=48.4
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHhhccccccccccccccccccccCC
Q psy8358 375 ATVQNLKNRFHMNLTEEQLQVLIDKLVDTSIHSLSTKLYDGFQYYTNGIL 424 (424)
Q Consensus 375 ~~i~~Lr~Rf~~~lse~qv~~~i~~~id~s~~~~~tk~Yd~~q~~tngi~ 424 (424)
.++..|++||++++||+|+..++.++|..|.+||.|++||.||++||||.
T Consensus 262 ~~i~~l~~rf~l~~se~~a~~~~~~lI~~s~~~~~t~~yD~~q~~~~gi~ 311 (311)
T cd05167 262 DTIKNLRQRFAPEKSEREAAEFMLSLIAESYEKFRTKGYDQFQYYQNGIP 311 (311)
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhchhHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999999999999999999995
No 39
>cd00893 PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. There are two types of PI4Ks, types II and III. Type II PI4Ks lack the characteristic catalytic kinase domain present in PI3Ks and type III PI4Ks, and are excluded from this family. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes.
Probab=98.45 E-value=7.7e-08 Score=94.57 Aligned_cols=50 Identities=42% Similarity=0.731 Sum_probs=48.2
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHhhccccccccccccccccccccCC
Q psy8358 375 ATVQNLKNRFHMNLTEEQLQVLIDKLVDTSIHSLSTKLYDGFQYYTNGIL 424 (424)
Q Consensus 375 ~~i~~Lr~Rf~~~lse~qv~~~i~~~id~s~~~~~tk~Yd~~q~~tngi~ 424 (424)
.++..+++||++++||+++..++.++|+.|.+||.|++||.||++||||.
T Consensus 240 ~~i~~l~~r~~l~~s~~~a~~~~~~lI~~s~~~~~t~~yD~~q~~~~gi~ 289 (289)
T cd00893 240 STIKKLKERLCLNMSEKEAINTVMKKIDSSYNSITTKLYDKVQYYQNGII 289 (289)
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCC
Confidence 57899999999999999999999999999999999999999999999995
No 40
>cd05168 PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI4Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 4-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) to generate PtdIns(4)P, the major precursor in the synthesis of other phosphoinositides including PtdIns(4,5)P2, PtdIns(3,4)P2, and PtdIns(3,4,5)P3. Two isoforms of type III PI4K, alpha and beta, exist in most eukaryotes. PI4KIIIbeta (also called Pik1p in yeast) is a 110 kDa protein that is localized to the Golgi and the nucleus. It is required for maintaining the structural integrity of the Golgi complex (GC), and is a key regulator of protein transport from the GC to the plasma membrane. PI4KII
Probab=98.45 E-value=7.9e-08 Score=94.66 Aligned_cols=51 Identities=55% Similarity=0.933 Sum_probs=48.9
Q ss_pred hHHHHHhhhhcCCCCCHHHHHHHHHHHhhccccccccccccccccccccCC
Q psy8358 374 AATVQNLKNRFHMNLTEEQLQVLIDKLVDTSIHSLSTKLYDGFQYYTNGIL 424 (424)
Q Consensus 374 ~~~i~~Lr~Rf~~~lse~qv~~~i~~~id~s~~~~~tk~Yd~~q~~tngi~ 424 (424)
..+++.+++||.++++|+|+..++.++|+.|.++|+|++||+||+++|||+
T Consensus 243 ~~~i~~l~~r~~l~~se~~a~~~~~~lI~~s~~~~~t~~yD~~q~~~~gi~ 293 (293)
T cd05168 243 EFTIQQLRDRFMLNLTEEQLEVFVDELINQSLDNWRTRLYDKFQYLTNGIL 293 (293)
T ss_pred hHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhchhHHHHHHHHHHhcCCC
Confidence 368899999999999999999999999999999999999999999999996
No 41
>PF02260 FATC: FATC domain; InterPro: IPR003152 The FATC domain is found at the C-terminal end of the PIK-related kinases. Members of the family of PIK-related kinases may act as intracellular sensors that govern radial and horizontal pathways [].; GO: 0005515 protein binding; PDB: 2KIT_A 1W1N_A 2KIO_A.
Probab=97.38 E-value=5.9e-05 Score=49.66 Aligned_cols=28 Identities=25% Similarity=0.450 Sum_probs=24.8
Q ss_pred CHHHHHHHHHHHhhccccccccccccccccc
Q psy8358 389 TEEQLQVLIDKLVDTSIHSLSTKLYDGFQYY 419 (424)
Q Consensus 389 se~qv~~~i~~~id~s~~~~~tk~Yd~~q~~ 419 (424)
.++||+.+|++|+|+.+ +++||.||.||
T Consensus 5 v~~qV~~LI~~At~~~n---La~my~GW~pw 32 (33)
T PF02260_consen 5 VEQQVDELISEATDPEN---LARMYIGWMPW 32 (33)
T ss_dssp STHHHHHHHHHHHHHHH---HHHHCTSS-TT
T ss_pred HHHHHHHHHHHHcCHHH---HHHHhcchhcc
Confidence 48999999999999966 79999999997
No 42
>cd00896 PI3Kc_III Phosphoinositide 3-kinase (PI3K), class III, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class III PI3Ks, also called Vps34 (vacuolar protein sorting 34), contain an N-terminal lipid binding C2 domain, a PI3K homology domain of unknown function, and a C-termin
Probab=96.30 E-value=0.0019 Score=65.53 Aligned_cols=48 Identities=15% Similarity=0.407 Sum_probs=45.2
Q ss_pred hHHHHHhhhhcCCCCCHHHHHHHHHHHhhccccccccccccccccccc
Q psy8358 374 AATVQNLKNRFHMNLTEEQLQVLIDKLVDTSIHSLSTKLYDGFQYYTN 421 (424)
Q Consensus 374 ~~~i~~Lr~Rf~~~lse~qv~~~i~~~id~s~~~~~tk~Yd~~q~~tn 421 (424)
..++..+++||.+++||+|+..++.++|+.|.+||.|++||.+|.+.+
T Consensus 301 ~~~i~~l~~rf~l~~s~~ea~~~~~~lI~~s~~~~~t~~~d~~h~~aq 348 (350)
T cd00896 301 DKAILKVQEKFRLDLSDEEAIKHFQNLINDSVNALFPVVVDRLHAWAQ 348 (350)
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 368899999999999999999999999999999999999999998865
No 43
>PF13575 DUF4135: Domain of unknown function (DUF4135)
Probab=95.40 E-value=0.2 Score=51.15 Aligned_cols=136 Identities=19% Similarity=0.126 Sum_probs=97.6
Q ss_pred eEEeecCCcceeccCCCCCcEEEEecCcchhhhhhhhcCCCCCcCCCcceEEEEEecCCchhhHHHHHHHHHHHHHHHHh
Q psy8358 65 HIVRIPPSAAAVLNSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKSGDDLRQELLASQLLTLLQKIWDI 144 (424)
Q Consensus 65 ~i~~i~~~~~~v~~S~~k~p~~~~~~~~~~~k~~~~~~~~~~g~~~~~~~~~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~ 144 (424)
.|++|..+.+-.=+.. |...++.|.+ | ..+++|.. +++-|.....+++.+|.-...
T Consensus 44 ~i~~I~~~~GD~H~~G-r~V~~l~f~~--------------------g--~kivYKPR-sl~~d~~f~~l~~~ln~~~~~ 99 (370)
T PF13575_consen 44 KITSIEFGLGDTHNGG-RSVAILEFSS--------------------G--KKIVYKPR-SLSIDKAFNDLLEWLNEKNGT 99 (370)
T ss_pred CceEecCCCCCcCCCC-ceEEEEEECC--------------------C--CEEEEeCc-ccHHHHHHHHHHHHHhhhccc
Confidence 4667766555443333 4566666641 1 25899975 499999999888888865321
Q ss_pred CCCCceeecceEEEecCCCceeeeeCCcccHHHHHhhccccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhc
Q psy8358 145 ERVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKNSQVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQ 224 (424)
Q Consensus 145 ~~~~l~l~~Y~vip~~~~~GlIE~v~~~~tl~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLg 224 (424)
-.+.+.+.+|+.-+.+.|..|+|+.... .+ .+..++|-+-++++..+.|+||
T Consensus 100 --~~~~l~~~~~l~~g~~YgW~EfI~~~~c----------------------~~----~~ev~~yY~r~G~llal~y~L~ 151 (370)
T PF13575_consen 100 --PSLDLPTPKVLDRGDGYGWQEFIEHEPC----------------------NS----EEEVERYYYRLGVLLALLYLLN 151 (370)
T ss_pred --cccccccceeeeccCcceeEEEecCCCC----------------------CC----HHHHHHHHHHHHHHHHHHHHhC
Confidence 2356788899998888999999974211 01 2234667777888999999999
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccCC
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSLS 253 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~~ 253 (424)
..|=|.+||.-+ .+.-+=||.-.+|...
T Consensus 152 ~~DlH~ENIIa~-g~~PvlIDlETlf~~~ 179 (370)
T PF13575_consen 152 GTDLHFENIIAS-GEYPVLIDLETLFHPV 179 (370)
T ss_pred CCcccccceEEe-CCCcEEEehhhhCCcc
Confidence 999999999884 4457889999888873
No 44
>cd00891 PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms c
Probab=95.33 E-value=0.011 Score=60.12 Aligned_cols=46 Identities=17% Similarity=0.333 Sum_probs=43.0
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHhhcccccccccccccccccc
Q psy8358 375 ATVQNLKNRFHMNLTEEQLQVLIDKLVDTSIHSLSTKLYDGFQYYT 420 (424)
Q Consensus 375 ~~i~~Lr~Rf~~~lse~qv~~~i~~~id~s~~~~~tk~Yd~~q~~t 420 (424)
.++..+++||++++||+|+..++.++|+.|.++|+|+.||.++.+.
T Consensus 306 ~~i~~l~~r~~l~~s~~~a~~~~~~lI~~s~~~~~~~~~~~~h~~~ 351 (352)
T cd00891 306 EDIEYLRDALALDKSDEEATEYFRKLIHESLNSKTTKVNNFIHNLA 351 (352)
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcchHhHHHHHHHhh
Confidence 5789999999999999999999999999999999999999888764
No 45
>cd05176 PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), class II, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do n
Probab=95.04 E-value=0.02 Score=57.92 Aligned_cols=46 Identities=13% Similarity=0.260 Sum_probs=42.2
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHhhcccccccccccccccccc
Q psy8358 375 ATVQNLKNRFHMNLTEEQLQVLIDKLVDTSIHSLSTKLYDGFQYYT 420 (424)
Q Consensus 375 ~~i~~Lr~Rf~~~lse~qv~~~i~~~id~s~~~~~tk~Yd~~q~~t 420 (424)
.++..+++||.+++||+|+..++.++|+.|.++|.|+++|.+..+.
T Consensus 307 ~~i~~l~~r~~l~~sd~ea~~~f~~lI~~s~~s~~t~~~~~~H~~a 352 (353)
T cd05176 307 QDLKYVYDALQPQTTDAEATIFFTRLIESSLGSVATKFNFFIHNLA 352 (353)
T ss_pred hHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhchhHhHHHHHHHhc
Confidence 4789999999999999999999999999999999999999876653
No 46
>cd00895 PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), class II, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do not
Probab=94.99 E-value=0.014 Score=59.11 Aligned_cols=46 Identities=17% Similarity=0.216 Sum_probs=42.0
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHhhcccccccccccccccccc
Q psy8358 375 ATVQNLKNRFHMNLTEEQLQVLIDKLVDTSIHSLSTKLYDGFQYYT 420 (424)
Q Consensus 375 ~~i~~Lr~Rf~~~lse~qv~~~i~~~id~s~~~~~tk~Yd~~q~~t 420 (424)
.++..+++||.+++||+|+..++.++|+.|.+||+|++|+.+..+.
T Consensus 308 ~~i~~l~~rf~l~~se~eA~~~f~~lI~~s~~s~~t~~~~~~H~~a 353 (354)
T cd00895 308 EDLKYVYDALRPQDTEADATTYFTRLIESSLGSVATKLNFFIHNLA 353 (354)
T ss_pred hHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhhhHhHHHHHHHhc
Confidence 4789999999999999999999999999999999999999776543
No 47
>cd05166 PI3Kc_II Phosphoinositide 3-kinase (PI3K), class II, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do not associate with any
Probab=93.00 E-value=0.062 Score=54.62 Aligned_cols=42 Identities=19% Similarity=0.270 Sum_probs=39.1
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHhhcccccccccccccc
Q psy8358 375 ATVQNLKNRFHMNLTEEQLQVLIDKLVDTSIHSLSTKLYDGF 416 (424)
Q Consensus 375 ~~i~~Lr~Rf~~~lse~qv~~~i~~~id~s~~~~~tk~Yd~~ 416 (424)
.++..||+||.+++||+|+..++.++|+.|.+||.|++.+.+
T Consensus 307 ~~i~~l~~r~~l~~s~~ea~~~~~~~I~~s~~s~~t~~~~~~ 348 (353)
T cd05166 307 QDLKYVRDALRPQLTDAEATIQFTKMIQSSLGSAFTKLNFFI 348 (353)
T ss_pred hHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 578999999999999999999999999999999999988754
No 48
>TIGR03843 conserved hypothetical protein. This model represents a protein family largely restricted to the Actinobacteria (high-GC Gram-positives), although it is also found in the Chloroflexi. Distant similarity to the phosphatidylinositol 3- and 4-kinase is suggested by the matching of some members to pfam00454.
Probab=92.76 E-value=0.16 Score=48.54 Aligned_cols=115 Identities=13% Similarity=0.094 Sum_probs=70.2
Q ss_pred HHHHhCCCCceeecceEEEecC-CCceee-eeCCcccHHHHHhhcc--ccHHHHHH--HHhCCCChHHHHHHHHHHHHHh
Q psy8358 140 KIWDIERVPLILHPYKILCLSN-DSGLIE-PILNTVSLHQIKKNSQ--VSLLEYFI--QEFGDINSEGFLAAQKNFVQST 213 (424)
Q Consensus 140 ~i~~~~~~~l~l~~Y~vip~~~-~~GlIE-~v~~~~tl~~i~~~~~--~~l~~~~~--~~~~~~~~~~~~~~r~~F~~Sl 213 (424)
..+-++.+...+.|+.|+--++ ..|++| ||.+..+. ++..-.. ..-..|+. ..+. ... .-.......-..+
T Consensus 59 AYlvs~~lGw~~VPpTvlrDGP~G~GmvQlwie~~~~~-~lv~l~~~~~~~~g~~~v~~~~d-~~g-~~v~l~h~d~~~l 135 (253)
T TIGR03843 59 AYLVSEALGWGLVPPTVLRDGPFGPGMVQLWIDPDDDP-DLVDLVPAGEVPEGWLPVLRAED-EEG-EPVVLVHADHPQL 135 (253)
T ss_pred HHHHHHHhCCCcCCCeeeecCCCCCceEEEeccCCCcc-chhhcccccccCCcccccccccc-ccC-cceeecccccHHH
Confidence 3444555678899999996544 478888 77764331 1211100 00001110 0000 000 0000111223457
Q ss_pred hHHHHHHHHhccCCCCCCceEEecCCcEEEEeccccccCCCCCC
Q psy8358 214 AAYSLVCYLLQVKDRHNGNILLSGEGHLIHIDFGFILSLSPRNL 257 (424)
Q Consensus 214 A~~sv~~yiLgigDRH~~NIli~~~G~~~HIDFg~~fg~~~~~~ 257 (424)
.-++|+=+++.=-|||.+|||..++|+++-||=|++|...+|+-
T Consensus 136 ~riaVfDi~inNaDRk~GhiL~~~dg~l~~IDHGl~f~~~~klr 179 (253)
T TIGR03843 136 RRMAVFDALVNNADRKGGHVLPGPDGRVWGVDHGVCFHVEPKLR 179 (253)
T ss_pred hhhhhheeeeecCCCCCCcEeEcCCCcEEEecCceecCCCCccc
Confidence 77899999999999999999999999999999999999987654
No 49
>cd00894 PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), class IB, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and
Probab=92.43 E-value=0.097 Score=53.31 Aligned_cols=48 Identities=10% Similarity=0.140 Sum_probs=43.0
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHhhcccccccccccccccccccc
Q psy8358 375 ATVQNLKNRFHMNLTEEQLQVLIDKLVDTSIHSLSTKLYDGFQYYTNG 422 (424)
Q Consensus 375 ~~i~~Lr~Rf~~~lse~qv~~~i~~~id~s~~~~~tk~Yd~~q~~tng 422 (424)
..+..||+||.+++||+|+..+..++|..|.++++|.+|+.|.+..-|
T Consensus 318 ~~i~~l~~~~~l~~se~eA~~~f~~~I~~s~~~~~~~~~n~~~h~~~~ 365 (365)
T cd00894 318 EDIEYIRDALTVGKSEEDAKKHFLDQIEVCRDKGWTVQFNWFLHLVLG 365 (365)
T ss_pred hHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcCCeeeeHHHHHHhcC
Confidence 468999999999999999999999999999999999999998765433
No 50
>cd05175 PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), class IA, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and
Probab=92.39 E-value=0.22 Score=50.70 Aligned_cols=43 Identities=14% Similarity=0.162 Sum_probs=35.4
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHhhcc-cccccccccccccc
Q psy8358 375 ATVQNLKNRFHMNLTEEQLQVLIDKLVDTS-IHSLSTKLYDGFQY 418 (424)
Q Consensus 375 ~~i~~Lr~Rf~~~lse~qv~~~i~~~id~s-~~~~~tk~Yd~~q~ 418 (424)
..+..||+||.+++||+|+..+..++|..| .++|+|+ ||+|-+
T Consensus 319 ~~i~~lr~rf~l~~sd~eA~~~f~~~I~~s~~~~w~t~-~n~~~H 362 (366)
T cd05175 319 DDIAYIRKTLALDKTEQEALEYFMKQMNDAHHGGWTTK-MDWIFH 362 (366)
T ss_pred cHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHhcCceee-ehHHHH
Confidence 468899999999999999999988877655 4579988 887754
No 51
>cd05177 PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), class II, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class II PI3Ks preferentially use PtdIns as a substrate to produce PtdIns(3)P, but can also phosphorylate PtdIns(4)P. They function as monomers and do n
Probab=90.68 E-value=0.22 Score=50.60 Aligned_cols=41 Identities=15% Similarity=0.176 Sum_probs=37.3
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHhhccccccccccccc
Q psy8358 375 ATVQNLKNRFHMNLTEEQLQVLIDKLVDTSIHSLSTKLYDG 415 (424)
Q Consensus 375 ~~i~~Lr~Rf~~~lse~qv~~~i~~~id~s~~~~~tk~Yd~ 415 (424)
..+..+|+||.+++||+|+..++.++|..|.++|.|++.+-
T Consensus 308 ~~i~~l~~~~~l~~sd~eA~~~f~~lI~~s~~~~~~~~~~~ 348 (354)
T cd05177 308 QDLKYVYNNLRPQDTDLEATSYFTKKIKESLECFPVKLNNL 348 (354)
T ss_pred hHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhhHHhHHHH
Confidence 46899999999999999999999999999999998887654
No 52
>KOG0608|consensus
Probab=89.14 E-value=0.79 Score=49.64 Aligned_cols=40 Identities=28% Similarity=0.362 Sum_probs=29.0
Q ss_pred HhhHHHHHHHHhccCCCCCCceEEecCCcEEEEecccccc
Q psy8358 212 STAAYSLVCYLLQVKDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 212 SlA~~sv~~yiLgigDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
.||.=||---=+==.|=-+||||||++|||=-.|||.+=|
T Consensus 739 tcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTG 778 (1034)
T KOG0608|consen 739 TCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 778 (1034)
T ss_pred HHHHHHHHhccceecccCccceEEccCCceeeeecccccc
Confidence 4555555322222347789999999999999999998865
No 53
>cd05165 PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, immune cell activation and apoptosis. They can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. In vitro, they can also phosphorylate the substrates P
Probab=88.23 E-value=0.39 Score=49.03 Aligned_cols=44 Identities=14% Similarity=0.258 Sum_probs=38.2
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHhhcccc-ccccccccccccc
Q psy8358 375 ATVQNLKNRFHMNLTEEQLQVLIDKLVDTSIH-SLSTKLYDGFQYY 419 (424)
Q Consensus 375 ~~i~~Lr~Rf~~~lse~qv~~~i~~~id~s~~-~~~tk~Yd~~q~~ 419 (424)
.++..||+||.+++||+|+..++.++|..|.+ +|.| .||.|-+.
T Consensus 319 ~~i~~lr~rf~l~~se~eA~~~f~~~I~~s~~~~~~t-~~~~~~H~ 363 (366)
T cd05165 319 EDIEYLRDTLALGKSEEEALKYFLDKFNEALDGSWTT-KFNWFSHL 363 (366)
T ss_pred hHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcCcee-eeHHHHHH
Confidence 57899999999999999999999999999987 5666 88877653
No 54
>cd04792 LanM-like LanM-like proteins. LanM is a bifunctional enzyme, involved in the synthesis of class II lantibiotics. It is responsible for both the dehydration and the cyclization of the precursor-peptide during lantibiotic synthesis. The C-terminal domain shows similarity to LanC, the cyclase component of the lan operon, but the N terminus seems to be unrelated to the dehydratase, LanB.
Probab=87.74 E-value=2.7 Score=47.55 Aligned_cols=106 Identities=22% Similarity=0.207 Sum_probs=80.7
Q ss_pred EEEEecCCchhhHHHHHHHHHHHHHHHHhCCCCceeecceEEEecCCCceeeeeCCcccHHHHHhhccccHHHHHHHHhC
Q psy8358 116 AAIVKSGDDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKNSQVSLLEYFIQEFG 195 (424)
Q Consensus 116 ~~i~K~gdDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~~~~GlIE~v~~~~tl~~i~~~~~~~l~~~~~~~~~ 195 (424)
.+++|..+ |+-|+...++++.+|.-. ....+++++|+. ..+-|..|+|+...
T Consensus 115 kivYKPr~-l~~d~~f~~~l~~ln~~~----~~~~~~~~~~l~-~~~ygw~EfI~~~~---------------------- 166 (825)
T cd04792 115 KLVYKPRS-LSVDALFQELLEWLNSFL----GALPLRTPKVLD-RGDYGWEEFIEHQP---------------------- 166 (825)
T ss_pred EEEECCCC-chHHHHHHHHHHHHHhcC----Cccccccceeee-cCCcceEEeecCCC----------------------
Confidence 58999754 999999999998888532 223347888886 45589999997410
Q ss_pred CCChHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEecCCcEEEEeccccccCCC
Q psy8358 196 DINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSGEGHLIHIDFGFILSLSP 254 (424)
Q Consensus 196 ~~~~~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~~G~~~HIDFg~~fg~~~ 254 (424)
..+ .+..++|-+-+..+..+.|+||.-|=|.+|| |...++-+=||+--+|....
T Consensus 167 c~~----~~e~~~fY~r~G~llal~y~L~~tD~H~ENi-IA~g~~PvlIDlETlf~~~~ 220 (825)
T cd04792 167 CQS----KEEVERYYYRLGGLLALLYLLNATDLHFENI-IASGEYPVLIDLETLFHPRL 220 (825)
T ss_pred CCC----HHHHHHHHHHHHHHHHHHHHcCCcccchhhh-eeeCCCceEEeeHHhcCCCc
Confidence 011 2334677778899999999999999999999 77778899999988887654
No 55
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=87.50 E-value=0.38 Score=51.42 Aligned_cols=79 Identities=25% Similarity=0.396 Sum_probs=49.2
Q ss_pred CceeecceEEE--ecCCCceeeeeCCcccHHHHH--hhcccc---HHH-----HHHHHhCCCChHHHHHHHHHHHHHhhH
Q psy8358 148 PLILHPYKILC--LSNDSGLIEPILNTVSLHQIK--KNSQVS---LLE-----YFIQEFGDINSEGFLAAQKNFVQSTAA 215 (424)
Q Consensus 148 ~l~l~~Y~vip--~~~~~GlIE~v~~~~tl~~i~--~~~~~~---l~~-----~~~~~~~~~~~~~~~~~r~~F~~SlA~ 215 (424)
+-.+...+|.+ ++++.=.+|||.+. .+.++. +..+.+ +.+ ||...+ ++.|.+
T Consensus 225 ~~~v~VP~V~we~t~~~VLtmE~i~Gi-~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~-----------~dgffH---- 288 (517)
T COG0661 225 DPDVYVPKVYWEYTTRRVLTMEWIDGI-KISDIAALKSAGIDRKELAELLVRAFLRQLL-----------RDGFFH---- 288 (517)
T ss_pred CCCeEeceeehhccCCcEEEEEeeCCE-ecccHHHHHhcCCCHHHHHHHHHHHHHHHHH-----------hcCccc----
Confidence 44577777885 68889999999754 444432 111111 111 111111 112221
Q ss_pred HHHHHHHhccCCCCCCceEEecCCcEEEEeccccccC
Q psy8358 216 YSLVCYLLQVKDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 216 ~sv~~yiLgigDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
+|=|+|||+++.+|+++-+|||.+=.-
T Consensus 289 ----------aDpHpGNi~v~~~g~i~~lDfGi~g~l 315 (517)
T COG0661 289 ----------ADPHPGNILVRSDGRIVLLDFGIVGRL 315 (517)
T ss_pred ----------cCCCccceEEecCCcEEEEcCcceecC
Confidence 799999999999999999999987333
No 56
>cd05173 PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), class IA, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and de
Probab=86.60 E-value=0.59 Score=47.66 Aligned_cols=38 Identities=24% Similarity=0.349 Sum_probs=34.0
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHhhcccc-cccccc
Q psy8358 375 ATVQNLKNRFHMNLTEEQLQVLIDKLVDTSIH-SLSTKL 412 (424)
Q Consensus 375 ~~i~~Lr~Rf~~~lse~qv~~~i~~~id~s~~-~~~tk~ 412 (424)
.++..||+||++++||+|+..+..++|+.|.+ +|.|+.
T Consensus 314 ~~i~~l~~r~~l~~se~eA~~~f~~~i~~s~~~~~~t~~ 352 (362)
T cd05173 314 KDIQYLKDSLALGKSEEEALKQFRQKFDEALRESWTTKV 352 (362)
T ss_pred hHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhcchhhh
Confidence 57899999999999999999999999998884 787765
No 57
>KOG0616|consensus
Probab=85.68 E-value=0.52 Score=46.60 Aligned_cols=60 Identities=30% Similarity=0.451 Sum_probs=38.3
Q ss_pred HHHHHHHhcc----CCCCCCceEEecCCcEEEEeccccccCCCCCCCCCCCCccccHHHHHHhC
Q psy8358 216 YSLVCYLLQV----KDRHNGNILLSGEGHLIHIDFGFILSLSPRNLGFETSPFKLTLEVVEVFG 275 (424)
Q Consensus 216 ~sv~~yiLgi----gDRH~~NIli~~~G~~~HIDFg~~fg~~~~~~~~E~vPFrLT~~~~~~mg 275 (424)
.|.+-|+=+. .|--++|||||++|++==+||||.=--...-...=-.|==|.||++..=|
T Consensus 154 vlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~ 217 (355)
T KOG0616|consen 154 VLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKG 217 (355)
T ss_pred HHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEEEecCCccccChHHhhcCC
Confidence 3445555443 58899999999999999999999754433222111234446666664443
No 58
>cd05174 PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), class IA, delta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives. PI3Ks can be divided into three main classes (I, II, and III), defined by their substrate specificity, regulation, and domain structure. Class I PI3Ks are the only enzymes capable of converting PtdIns(4,5)P2 to the critical second messenger PtdIns(3,4,5)P3. Class I enzymes are heterodimers and exist in multiple isoforms consisting of one catalytic subunit (out of four isoforms) and one of several regulatory subunits. They are further classified into class IA (alpha, beta and
Probab=82.35 E-value=1.2 Score=45.32 Aligned_cols=38 Identities=24% Similarity=0.291 Sum_probs=33.4
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHhhccc-ccccccc
Q psy8358 375 ATVQNLKNRFHMNLTEEQLQVLIDKLVDTSI-HSLSTKL 412 (424)
Q Consensus 375 ~~i~~Lr~Rf~~~lse~qv~~~i~~~id~s~-~~~~tk~ 412 (424)
.++..||+||++++||+|+..+....|..|. .+|.|+.
T Consensus 314 ~~i~~l~~~~~l~~se~ea~~~f~~~i~~s~~~~~~~~~ 352 (361)
T cd05174 314 KDIQYLKDSLALGKTEEEALKHFRVKFNEALRESWKTKV 352 (361)
T ss_pred hHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCchhhh
Confidence 5789999999999999999999999888877 5888874
No 59
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=81.61 E-value=0.87 Score=48.98 Aligned_cols=28 Identities=43% Similarity=0.678 Sum_probs=24.4
Q ss_pred CCCCCCceEEecCC----cEEEEeccccccCC
Q psy8358 226 KDRHNGNILLSGEG----HLIHIDFGFILSLS 253 (424)
Q Consensus 226 gDRH~~NIli~~~G----~~~HIDFg~~fg~~ 253 (424)
+|=|++||+++.+| +++-+|||.+=.-+
T Consensus 284 aDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 284 ADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred CCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 89999999999887 99999999884443
No 60
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=81.25 E-value=6.4 Score=36.51 Aligned_cols=100 Identities=13% Similarity=0.189 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHHhCCCCceeecceEEEecCC-Cc-------eeeeeCCcccHHHHHhhccccHHHHHHHHhCCCChHH
Q psy8358 130 LASQLLTLLQKIWDIERVPLILHPYKILCLSND-SG-------LIEPILNTVSLHQIKKNSQVSLLEYFIQEFGDINSEG 201 (424)
Q Consensus 130 ~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~~~-~G-------lIE~v~~~~tl~~i~~~~~~~l~~~~~~~~~~~~~~~ 201 (424)
++.+=+..+..+.+ .| +.|..+++.+.. .| +.|.++++.++.++...... .+
T Consensus 57 ra~~E~~~~~~L~~-~G----i~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~------------~~--- 116 (206)
T PF06293_consen 57 RAKREWRNLQRLRE-AG----IPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ------------LD--- 116 (206)
T ss_pred HHHHHHHHHHHHHH-cC----CCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc------------cc---
Confidence 44444455554443 34 456666665543 11 56889999888887754211 11
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhcc--CCCCCCceEEecCC---cEEEEeccccc
Q psy8358 202 FLAAQKNFVQSTAAYSLVCYLLQV--KDRHNGNILLSGEG---HLIHIDFGFIL 250 (424)
Q Consensus 202 ~~~~r~~F~~SlA~~sv~~yiLgi--gDRH~~NIli~~~G---~~~HIDFg~~f 250 (424)
...++.+.+.+|.+-.--+-.|| ||=|+.|||++.++ ++.=|||+-+-
T Consensus 117 -~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~ 169 (206)
T PF06293_consen 117 -PSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMR 169 (206)
T ss_pred -hhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhce
Confidence 12245666677776666666666 89999999999977 89999996543
No 61
>PF06702 DUF1193: Protein of unknown function (DUF1193); InterPro: IPR009581 This family is baesd on the C terminus of several hypothetical eukaryotic proteins of unknown function. Proteins in this entry contain two conserved motifs: DRHHYE and QCC, as well as a number of conserved cysteine residues.
Probab=79.36 E-value=9.5 Score=36.18 Aligned_cols=106 Identities=17% Similarity=0.236 Sum_probs=64.5
Q ss_pred HHhhHHHHHHHHhccCCCCCCceEEe--cCCcEEEEeccccccCCCCCCCCCCCCccccHHHHHHhCCCcchhhHHHHHH
Q psy8358 211 QSTAAYSLVCYLLQVKDRHNGNILLS--GEGHLIHIDFGFILSLSPRNLGFETSPFKLTLEVVEVFGGVDMFCYFKILML 288 (424)
Q Consensus 211 ~SlA~~sv~~yiLgigDRH~~NIli~--~~G~~~HIDFg~~fg~~~~~~~~E~vPFrLT~~~~~~mg~~~~~~~f~~~~~ 288 (424)
.-+.-++|+=|++|=+|||--|+.=. ..|-++|+|=|--||+.......=.+| ....-.|+....
T Consensus 90 ldliDm~IFDFLigN~DRhhye~f~~fgn~~~l~~LDNgrgFG~~~~de~sIlaP-------------L~QcC~iRrST~ 156 (221)
T PF06702_consen 90 LDLIDMAIFDFLIGNMDRHHYETFNKFGNEGFLLHLDNGRGFGRPSHDELSILAP-------------LYQCCRIRRSTW 156 (221)
T ss_pred hHHHHHHHHHHHhcCCcchhhhhhhccCCCceEEEEeCCcccCCCCCCccchhcc-------------HHHhhhccccHH
Confidence 34556788999999999999885421 257799999999998755321000111 122234555555
Q ss_pred HHHHHHhcChhHHHHHHH-HHhcCCCCcccccchhhHHhhhhhc
Q psy8358 289 QGLIAARKHMDKILSLVE-IMRSGSQLPCFKSGAATVQNLKNRF 331 (424)
Q Consensus 289 ~~~~~LR~~~~~i~~ll~-~~~~~~~lp~~~~~~~~i~~l~~r~ 331 (424)
..++.|.+....+-.++. .+..|+..|-+. +.-++.+..|+
T Consensus 157 ~rL~~l~~~~~~Ls~~m~~s~~~D~l~PvL~--e~Hl~AldrRL 198 (221)
T PF06702_consen 157 ERLQLLSKGGYRLSDLMRESLSRDPLAPVLT--EPHLEALDRRL 198 (221)
T ss_pred HHHHHhccCCCcHHHHHHHHhccCccCccCc--HHHHHHHHHHH
Confidence 666666655555555553 345666667665 34455565554
No 62
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=79.04 E-value=1.3 Score=42.35 Aligned_cols=23 Identities=39% Similarity=0.541 Sum_probs=21.3
Q ss_pred CCCCCCceEEecCCcEEEEecccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
||=|++|||++.+| +.=||||..
T Consensus 159 ~Dikp~Nili~~~g-i~liDfg~~ 181 (232)
T PRK10359 159 GDPHKGNFIVSKNG-LRIIDLSGK 181 (232)
T ss_pred CCCChHHEEEeCCC-EEEEECCCc
Confidence 79999999999999 999999865
No 63
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=78.97 E-value=3.6 Score=37.28 Aligned_cols=28 Identities=29% Similarity=0.422 Sum_probs=23.8
Q ss_pred HHhcc--CCCCCCceEEecCCcEEEEecccc
Q psy8358 221 YLLQV--KDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 221 yiLgi--gDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
+-.|+ ||=|++|||++ +|++.-||||..
T Consensus 107 H~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a 136 (199)
T TIGR03724 107 HKAGIVHGDLTTSNIIVR-DDKLYLIDFGLG 136 (199)
T ss_pred HHCCeecCCCCcceEEEE-CCcEEEEECCCC
Confidence 34455 89999999999 899999999864
No 64
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=78.29 E-value=1.6 Score=39.80 Aligned_cols=26 Identities=31% Similarity=0.337 Sum_probs=23.1
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
+|=|++|||++ +|++.=||||..-..
T Consensus 142 rDlkP~NIll~-~~~~~liDFG~a~~~ 167 (190)
T cd05145 142 GDLSEYNILYH-DGKPYIIDVSQAVEL 167 (190)
T ss_pred CCCChhhEEEE-CCCEEEEEcccceec
Confidence 89999999999 899999999987443
No 65
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=78.20 E-value=1.6 Score=45.67 Aligned_cols=24 Identities=42% Similarity=0.879 Sum_probs=22.7
Q ss_pred CCCCCCceEEecCCcEEEEecccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
+|=|++|||++.+|++.=||||.+
T Consensus 281 ~D~hPgNilv~~~g~i~liDfG~~ 304 (437)
T TIGR01982 281 ADLHPGNIFVLKDGKIIALDFGIV 304 (437)
T ss_pred CCCCcccEEECCCCcEEEEeCCCe
Confidence 699999999999999999999976
No 66
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=78.18 E-value=1.9 Score=37.74 Aligned_cols=27 Identities=33% Similarity=0.448 Sum_probs=23.0
Q ss_pred ccCCCCCCceEEecCCcEEEEecccccc
Q psy8358 224 QVKDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 224 gigDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
-=||=|++|||++ +|++.-||||..--
T Consensus 110 ~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 110 CHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 3399999999999 78899999988643
No 67
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=76.83 E-value=1.6 Score=40.14 Aligned_cols=27 Identities=26% Similarity=0.375 Sum_probs=23.7
Q ss_pred cc--CCCCCCceEEecCCcEEEEecccccc
Q psy8358 224 QV--KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 224 gi--gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
|| ||=|++|||++ +|++.=||||..-.
T Consensus 138 giiHrDlkP~NIli~-~~~v~LiDFG~a~~ 166 (190)
T cd05147 138 RLVHADLSEYNLLYH-DGKLYIIDVSQSVE 166 (190)
T ss_pred CcccCCCCHHHEEEE-CCcEEEEEcccccc
Confidence 66 89999999998 68999999998753
No 68
>PRK14879 serine/threonine protein kinase; Provisional
Probab=74.55 E-value=7.1 Score=35.62 Aligned_cols=23 Identities=39% Similarity=0.687 Sum_probs=21.3
Q ss_pred CCCCCCceEEecCCcEEEEecccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
||=|++|||++ +|.+.=||||..
T Consensus 119 ~Dl~p~Nil~~-~~~~~liDf~~a 141 (211)
T PRK14879 119 GDLTTSNMILS-GGKIYLIDFGLA 141 (211)
T ss_pred CCCCcccEEEE-CCCEEEEECCcc
Confidence 89999999999 899999999864
No 69
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=72.49 E-value=3.8 Score=37.40 Aligned_cols=29 Identities=24% Similarity=0.303 Sum_probs=25.6
Q ss_pred CCCCCCceEEecCCcEEEEeccccccCCC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSLSP 254 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~~~ 254 (424)
||=|++||+++.+|++.=||||.+.....
T Consensus 149 ~Dl~p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 149 GDLSEFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCCCcccEEEcCCCcEEEEECCccccCCC
Confidence 58899999999999999999998866654
No 70
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=70.30 E-value=13 Score=36.34 Aligned_cols=71 Identities=15% Similarity=0.112 Sum_probs=48.7
Q ss_pred eeeeeCCcccHHHHHhhccccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhcc--CCCCCCceEEec-----
Q psy8358 165 LIEPILNTVSLHQIKKNSQVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQV--KDRHNGNILLSG----- 237 (424)
Q Consensus 165 lIE~v~~~~tl~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgi--gDRH~~NIli~~----- 237 (424)
+.|.++++.|+.++... |.. ..++ ...+....+.+|....--+-.|| ||=+++|||++.
T Consensus 113 Vte~l~~~~sL~~~~~~-------~~~---~~~~----~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~ 178 (268)
T PRK15123 113 ITEDLAPTISLEDYCAD-------WAT---NPPD----PRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGR 178 (268)
T ss_pred EEeeCCCCccHHHHHHh-------hcc---cCCC----HHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCC
Confidence 67889988888887642 111 1111 22345566666666666666666 899999999985
Q ss_pred --CCcEEEEecccc
Q psy8358 238 --EGHLIHIDFGFI 249 (424)
Q Consensus 238 --~G~~~HIDFg~~ 249 (424)
+++++=|||+-+
T Consensus 179 ~~~~~~~LIDl~r~ 192 (268)
T PRK15123 179 EEDLKLSVIDLHRA 192 (268)
T ss_pred CCCceEEEEECCcc
Confidence 578999999765
No 71
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=66.88 E-value=12 Score=35.25 Aligned_cols=26 Identities=23% Similarity=0.230 Sum_probs=23.7
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=+++||+++.+|.+.-+|||....
T Consensus 124 ~dlkp~Nill~~~~~~kl~dfg~~~~ 149 (269)
T cd05042 124 SDLALRNCQLTADLSVKIGDYGLALE 149 (269)
T ss_pred ccccHhheEecCCCcEEEeccccccc
Confidence 78999999999999999999998654
No 72
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=64.29 E-value=5.4 Score=35.62 Aligned_cols=27 Identities=26% Similarity=0.342 Sum_probs=23.5
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccC
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
=||=|++|||++ +|.+.=||||..-..
T Consensus 138 H~Dl~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 138 HGDLSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred cCCCChhhEEEE-CCcEEEEECcccccc
Confidence 479999999999 999999999988443
No 73
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=64.17 E-value=85 Score=30.54 Aligned_cols=25 Identities=40% Similarity=0.728 Sum_probs=22.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||=.++||||+.+|++.=+|||+.-
T Consensus 120 ~Dlkp~NIll~~~~~~kl~Dfg~~~ 144 (321)
T cd05603 120 RDLKPENILLDSQGHVVLTDFGLCK 144 (321)
T ss_pred ccCCHHHeEECCCCCEEEccCCCCc
Confidence 7999999999999999999999753
No 74
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=62.77 E-value=5.6 Score=37.67 Aligned_cols=24 Identities=38% Similarity=0.544 Sum_probs=21.3
Q ss_pred cCCCCCCceEEecCCcEEEEecccc
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
=||=|++|||++.+| +.=|||++.
T Consensus 157 HgD~~~~Nii~~~~~-~~iIDwe~a 180 (226)
T TIGR02172 157 HGDFQIGNLITSGKG-TYWIDLGDF 180 (226)
T ss_pred ecCCCCCcEEEcCCC-cEEEechhc
Confidence 588899999999988 889999876
No 75
>PRK12274 serine/threonine protein kinase; Provisional
Probab=62.68 E-value=6.4 Score=37.34 Aligned_cols=30 Identities=27% Similarity=0.342 Sum_probs=25.2
Q ss_pred HHhcc--CCC-CCCceEEecCCcEEEEeccccc
Q psy8358 221 YLLQV--KDR-HNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 221 yiLgi--gDR-H~~NIli~~~G~~~HIDFg~~f 250 (424)
+=.|| +|= .++|||++.+|++.=||||..-
T Consensus 108 H~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~ 140 (218)
T PRK12274 108 HRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAV 140 (218)
T ss_pred HHCcCccCCCCCcceEEEcCCCCEEEEECCCce
Confidence 44566 788 5799999999999999999875
No 76
>PRK10271 thiK thiamine kinase; Provisional
Probab=62.40 E-value=7.2 Score=36.14 Aligned_cols=52 Identities=21% Similarity=0.191 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEecCCcEEEEeccccccCCC
Q psy8358 201 GFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSGEGHLIHIDFGFILSLSP 254 (424)
Q Consensus 201 ~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~~G~~~HIDFg~~fg~~~ 254 (424)
.|......|...... +-+..++-=||=|++||+++.+| +.=|||++.=..+|
T Consensus 58 ~wl~~~~~~~~~~~~-~~l~~~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gDp 109 (188)
T PRK10271 58 FWLRMLKRLRKAGEP-RPLRLAPLHMDVHAGNLVHSASG-LRLIDWEYAGDGDI 109 (188)
T ss_pred HHHHHHHHHHhcccC-CCCCeeeecCCCCCccEEEECCC-EEEEeCCcccCCCH
Confidence 565555555443333 22355666799999999998777 88999999877766
No 77
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=62.22 E-value=6.4 Score=37.55 Aligned_cols=26 Identities=35% Similarity=0.356 Sum_probs=22.8
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=+++|||++.+|++.=||||.+--
T Consensus 166 rDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 166 ADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred CCCCchhEEEcCCCCEEEEECCCccc
Confidence 69999999999999999999986543
No 78
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=60.62 E-value=7 Score=38.16 Aligned_cols=36 Identities=28% Similarity=0.315 Sum_probs=28.5
Q ss_pred HHHHhccCCCCCCceEEecC----CcEEEEeccccccCCC
Q psy8358 219 VCYLLQVKDRHNGNILLSGE----GHLIHIDFGFILSLSP 254 (424)
Q Consensus 219 ~~yiLgigDRH~~NIli~~~----G~~~HIDFg~~fg~~~ 254 (424)
...++==||=|.+|||++.+ |.+.-|||.+.=-..|
T Consensus 177 ~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p 216 (302)
T cd05156 177 SPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYR 216 (302)
T ss_pred CCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCc
Confidence 44566679999999999985 9999999988754433
No 79
>KOG0598|consensus
Probab=60.01 E-value=4.6 Score=40.89 Aligned_cols=25 Identities=40% Similarity=0.656 Sum_probs=23.0
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=-++|||||..||+.=.|||.+=
T Consensus 149 RDlKPENILLd~~GHi~LtDFgL~k 173 (357)
T KOG0598|consen 149 RDLKPENILLDEQGHIKLTDFGLCK 173 (357)
T ss_pred ccCCHHHeeecCCCcEEEeccccch
Confidence 5888999999999999999999875
No 80
>KOG0612|consensus
Probab=59.58 E-value=9.1 Score=44.34 Aligned_cols=56 Identities=25% Similarity=0.363 Sum_probs=43.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccccCCC-CCC---CCCCCCccccHHHHHHhCCC-cchh
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSLSP-RNL---GFETSPFKLTLEVVEVFGGV-DMFC 281 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~~~-~~~---~~E~vPFrLT~~~~~~mg~~-~~~~ 281 (424)
.|=-|||||||..||+=--|||-++--.. +.. ..--.|==++|+++..||+. +.||
T Consensus 199 RDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG 259 (1317)
T KOG0612|consen 199 RDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYG 259 (1317)
T ss_pred ccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccC
Confidence 57789999999999999999999987664 211 12335777999999999976 6555
No 81
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=59.55 E-value=21 Score=34.57 Aligned_cols=28 Identities=29% Similarity=0.336 Sum_probs=22.8
Q ss_pred hccCCCCCCceEEecCCcEEEEeccccc
Q psy8358 223 LQVKDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 223 LgigDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+==||=|++|||++.++-+.-|||+++-
T Consensus 177 l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 177 VIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred CCccCcCcccEEEeCCceEEEeehhhhc
Confidence 3349999999999987766799997753
No 82
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=59.38 E-value=8.4 Score=36.82 Aligned_cols=23 Identities=39% Similarity=0.458 Sum_probs=19.5
Q ss_pred CCCCCCceEEecCCcEEEEecccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
||=|++|++++.+| +.=|||+.-
T Consensus 159 GD~hpgNFlv~~~~-i~iID~~~k 181 (229)
T PF06176_consen 159 GDPHPGNFLVSNNG-IRIIDTQGK 181 (229)
T ss_pred CCCCcCcEEEECCc-EEEEECccc
Confidence 89999999999655 999999543
No 83
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=59.28 E-value=6 Score=36.10 Aligned_cols=31 Identities=35% Similarity=0.372 Sum_probs=20.7
Q ss_pred HHHhccCCCCCCceEEe-cCCcEEEEeccccc
Q psy8358 220 CYLLQVKDRHNGNILLS-GEGHLIHIDFGFIL 250 (424)
Q Consensus 220 ~yiLgigDRH~~NIli~-~~G~~~HIDFg~~f 250 (424)
...+-=||=|++|||++ .+|++--|||+.+-
T Consensus 165 ~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 165 PPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp CEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred CcEEEEeccccccceeeeccceeEEEecccce
Confidence 34566699999999999 57777799997763
No 84
>PHA00451 protein kinase
Probab=55.73 E-value=46 Score=32.77 Aligned_cols=56 Identities=16% Similarity=0.288 Sum_probs=35.9
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhcc--CCCCCCceEEecCCcEEEEe
Q psy8358 186 LLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQV--KDRHNGNILLSGEGHLIHID 245 (424)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgi--gDRH~~NIli~~~G~~~HID 245 (424)
+..+|.+... ++.+|..--..|+.+|--.- -|+.|| =|=|.+|||++.+|..+=.|
T Consensus 155 ~a~~~~e~~~--d~~~~~~~~~~FIETCk~IR--kFF~GIASFDmHSGNiMf~~~g~p~ITD 212 (362)
T PHA00451 155 AAYIIIECCS--DAAEEYPGSQEFIETCKMIR--KFFYGIASFDMHSGNIMFDQDGVPYITD 212 (362)
T ss_pred HHHHHHhccC--CHHhccCCchhHHHHHHHHH--HHHhhhhcccccCCceeeCCCCCeEecC
Confidence 4455554332 34455555567777776533 333444 39999999999999987666
No 85
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=54.78 E-value=1.7e+02 Score=27.16 Aligned_cols=25 Identities=28% Similarity=0.339 Sum_probs=23.0
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|-+++|||++.+|.+.=+|||..-
T Consensus 126 ~dl~~~Nill~~~~~~~l~dfg~~~ 150 (260)
T cd05069 126 RDLRAANILVGDNLVCKIADFGLAR 150 (260)
T ss_pred cccCcceEEEcCCCeEEECCCccce
Confidence 8999999999999999999999874
No 86
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=54.70 E-value=25 Score=32.60 Aligned_cols=27 Identities=33% Similarity=0.535 Sum_probs=24.2
Q ss_pred cCCCCCCceEEecCCcEEEEecccccc
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
-||=.++||+++.+|.+.-+|||....
T Consensus 124 h~dl~p~ni~i~~~~~~~l~d~g~~~~ 150 (262)
T cd06613 124 HRDIKGANILLTEDGDVKLADFGVSAQ 150 (262)
T ss_pred ecCCChhhEEECCCCCEEECccccchh
Confidence 489999999999999999999998754
No 87
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=54.36 E-value=1.6e+02 Score=28.74 Aligned_cols=25 Identities=40% Similarity=0.581 Sum_probs=22.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||=+++|||++.+|.+.=+|||..-
T Consensus 120 ~dlkp~NIli~~~~~~kL~DfG~~~ 144 (320)
T cd05590 120 RDLKLDNVLLDHEGHCKLADFGMCK 144 (320)
T ss_pred CCCCHHHeEECCCCcEEEeeCCCCe
Confidence 8999999999999999999999754
No 88
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=54.17 E-value=33 Score=31.96 Aligned_cols=25 Identities=24% Similarity=0.341 Sum_probs=23.0
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=+++||+++.+|.+.-+|||..-
T Consensus 124 ~dl~p~ni~i~~~~~~kl~dfg~~~ 148 (256)
T cd05059 124 RDLAARNCLVGEDNVVKVSDFGLAR 148 (256)
T ss_pred ccccHhhEEECCCCcEEECCcccce
Confidence 8999999999999999999999764
No 89
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=52.66 E-value=27 Score=32.30 Aligned_cols=30 Identities=27% Similarity=0.367 Sum_probs=25.4
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccCCC
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSLSP 254 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~~~ 254 (424)
-||=+++||+++.+|++.=+|||..-....
T Consensus 133 h~dl~p~nili~~~~~~kl~d~g~~~~~~~ 162 (265)
T cd08217 133 HRDLKPANIFLDANNNVKLGDFGLAKILGH 162 (265)
T ss_pred ecCCCHHHEEEecCCCEEEecccccccccC
Confidence 478999999999999999999997765433
No 90
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=52.65 E-value=38 Score=33.16 Aligned_cols=25 Identities=32% Similarity=0.549 Sum_probs=23.1
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||=+++|||++.+|++.=+|||..-
T Consensus 126 ~Dlkp~NIll~~~~~~kL~Dfg~a~ 150 (330)
T cd05601 126 RDIKPENVLIDRTGHIKLADFGSAA 150 (330)
T ss_pred ccCchHheEECCCCCEEeccCCCCe
Confidence 7999999999999999999999764
No 91
>smart00090 RIO RIO-like kinase.
Probab=51.95 E-value=12 Score=35.67 Aligned_cols=26 Identities=31% Similarity=0.449 Sum_probs=22.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
||=|++|||++ +|++.=||||.+...
T Consensus 173 ~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 173 GDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred CCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 79999999999 899999999976543
No 92
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=51.74 E-value=12 Score=34.01 Aligned_cols=30 Identities=20% Similarity=0.177 Sum_probs=23.2
Q ss_pred HHhccCCCCCCceEEec--CCcEEEEeccccc
Q psy8358 221 YLLQVKDRHNGNILLSG--EGHLIHIDFGFIL 250 (424)
Q Consensus 221 yiLgigDRH~~NIli~~--~G~~~HIDFg~~f 250 (424)
..+==||=|++|||++. +|.+.=|||+.+-
T Consensus 174 ~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 174 PGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred cEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 34445899999999998 5556679997664
No 93
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=49.88 E-value=17 Score=30.16 Aligned_cols=26 Identities=35% Similarity=0.386 Sum_probs=23.3
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||=|++|||++.+|.+.=+|||..--
T Consensus 113 ~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 113 GDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCCcceEEEECCcEEEEEecccccC
Confidence 89999999999999999999987643
No 94
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=49.79 E-value=14 Score=36.35 Aligned_cols=27 Identities=30% Similarity=0.365 Sum_probs=22.7
Q ss_pred hccCCCCCCceEEecCCcEEEEecccc
Q psy8358 223 LQVKDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 223 LgigDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
+==||=|.+||+++.+|...-|||+++
T Consensus 189 l~HgD~~~~Nvl~~~~~~~~vIDfd~~ 215 (307)
T TIGR00938 189 VIHADLFPDNVLFDGDSVKGVIDFYFA 215 (307)
T ss_pred cCCCCCCcCcEEEECCceEEEeecccc
Confidence 344899999999999886789999876
No 95
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=49.72 E-value=44 Score=32.90 Aligned_cols=49 Identities=27% Similarity=0.391 Sum_probs=32.6
Q ss_pred CCCCCCceEEecCCcEEEEeccccccCCCCCCC----CCCCCccccHHHHHHh
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSLSPRNLG----FETSPFKLTLEVVEVF 274 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~~~~~~~----~E~vPFrLT~~~~~~m 274 (424)
+|=.++||||+.+|++.=+|||........... .--.|.=+.||++..+
T Consensus 126 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 178 (331)
T cd05597 126 RDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAM 178 (331)
T ss_pred CCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhc
Confidence 788999999999999999999986432221110 0123444677777654
No 96
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=49.49 E-value=15 Score=34.55 Aligned_cols=30 Identities=27% Similarity=0.279 Sum_probs=22.4
Q ss_pred HHHhccCCCCCCceEEecCCcEEEEecccc
Q psy8358 220 CYLLQVKDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 220 ~yiLgigDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
.+.|==||=|.+|||++..+-.--|||+.+
T Consensus 163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a 192 (235)
T cd05155 163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCL 192 (235)
T ss_pred CceEEeCCCCCCcEEEECCCEEEEEeCccc
Confidence 344556999999999985443458999975
No 97
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=49.40 E-value=47 Score=30.93 Aligned_cols=27 Identities=22% Similarity=0.337 Sum_probs=23.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
||=+++||+++.+|.+.=+|||..-..
T Consensus 127 ~dl~p~Nil~~~~~~~~l~dfg~~~~~ 153 (261)
T cd05068 127 RDLAARNVLVGENNICKVADFGLARVI 153 (261)
T ss_pred ccCCcceEEEcCCCCEEECCcceEEEc
Confidence 899999999999999999999976543
No 98
>KOG0667|consensus
Probab=47.41 E-value=1e+02 Score=33.51 Aligned_cols=121 Identities=25% Similarity=0.223 Sum_probs=74.6
Q ss_pred EEecC-CchhhHHHHHHHHHHHHHHHHhCCCCceeecceEEEecCCCceeeeeCCcccHHHHHhhccccHHHHHHHHhCC
Q psy8358 118 IVKSG-DDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKNSQVSLLEYFIQEFGD 196 (424)
Q Consensus 118 i~K~g-dDLRqD~~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~~~~GlIE~v~~~~tl~~i~~~~~~~l~~~~~~~~~~ 196 (424)
|+|+. +=.||.+--+-++..+|+ ...+.-.-.++-|...-.-...=|+- |+. ..+|++++..+--.
T Consensus 218 IiKN~k~f~~Q~~~Ei~iL~~ln~-~d~~~~~n~Vrm~d~F~fr~HlciVf---------ELL---~~NLYellK~n~f~ 284 (586)
T KOG0667|consen 218 IIKNKKRFLRQAQIEIRILELLNK-HDPDDKYNIVRMLDYFYFRNHLCIVF---------ELL---STNLYELLKNNKFR 284 (586)
T ss_pred eeccChHHHHHHHHHHHHHHHHhc-cCCCCCeeEEEeeeccccccceeeee---------hhh---hhhHHHHHHhcCCC
Confidence 45544 567888888888888886 43333222344444433322222211 122 24677777654222
Q ss_pred CChHHHHHHHHHHHHHhhHHHHHHHHhcc--CCCCCCceEEec--CCcEEEEeccccccCCC
Q psy8358 197 INSEGFLAAQKNFVQSTAAYSLVCYLLQV--KDRHNGNILLSG--EGHLIHIDFGFILSLSP 254 (424)
Q Consensus 197 ~~~~~~~~~r~~F~~SlA~~sv~~yiLgi--gDRH~~NIli~~--~G~~~HIDFg~~fg~~~ 254 (424)
+=+ ....+.|+.++.-.-++-.-+|| +|--++||||.. .-+|==||||..=-.++
T Consensus 285 Gls---l~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q 343 (586)
T KOG0667|consen 285 GLS---LPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ 343 (586)
T ss_pred CCC---HHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCC
Confidence 111 45668899998888777778887 799999999985 56888999986544434
No 99
>PRK05231 homoserine kinase; Provisional
Probab=47.15 E-value=16 Score=35.97 Aligned_cols=25 Identities=32% Similarity=0.416 Sum_probs=19.9
Q ss_pred cCCCCCCceEEecCCcEEEEecccc
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
=||=|++|||++.++-..-|||+++
T Consensus 191 HgD~~~~Nil~~~~~~~~iIDf~~~ 215 (319)
T PRK05231 191 HADLFRDNVLFEGDRLSGFIDFYFA 215 (319)
T ss_pred CCCCCCCcEEEECCceEEEEecccc
Confidence 3899999999985443469999876
No 100
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=47.08 E-value=2.1e+02 Score=27.47 Aligned_cols=26 Identities=27% Similarity=0.279 Sum_probs=23.3
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||=.++||||+.+|.+.=+|||....
T Consensus 148 ~dlkp~Nili~~~~~~kl~dfg~~~~ 173 (303)
T cd05088 148 RDLAARNILVGENYVAKIADFGLSRG 173 (303)
T ss_pred cccchheEEecCCCcEEeCccccCcc
Confidence 78889999999999999999998753
No 101
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=46.92 E-value=47 Score=31.06 Aligned_cols=26 Identities=27% Similarity=0.500 Sum_probs=23.6
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=+++||+++.+|.+.-+|||....
T Consensus 135 ~dl~~~nili~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 135 RDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred CCCCHHHEEECCCCCEEEccCCCcee
Confidence 78899999999999999999998754
No 102
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=46.67 E-value=2.3e+02 Score=27.54 Aligned_cols=25 Identities=40% Similarity=0.741 Sum_probs=22.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++||||+.+|.+.=+|||..-
T Consensus 120 rDlkp~Nili~~~~~~kl~DfG~a~ 144 (325)
T cd05602 120 RDLKPENILLDSQGHIVLTDFGLCK 144 (325)
T ss_pred cCCCHHHeEECCCCCEEEccCCCCc
Confidence 7999999999999999999999753
No 103
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=45.84 E-value=2.6e+02 Score=26.27 Aligned_cols=25 Identities=28% Similarity=0.379 Sum_probs=22.4
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|-.++|||++.+|.+.-+|||..-
T Consensus 133 ~dlkp~nili~~~~~~kl~Dfg~~~ 157 (279)
T cd05111 133 RNLAARNILLKSDSIVQIADFGVAD 157 (279)
T ss_pred cccCcceEEEcCCCcEEEcCCccce
Confidence 6778999999999999999999773
No 104
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=45.54 E-value=2.4e+02 Score=28.24 Aligned_cols=24 Identities=38% Similarity=0.670 Sum_probs=22.3
Q ss_pred CCCCCCceEEecCCcEEEEecccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
+|=.++||||+.+|++.=+|||..
T Consensus 125 rDlKp~Nili~~~~~~kL~DFGl~ 148 (381)
T cd05626 125 RDIKPDNILIDLDGHIKLTDFGLC 148 (381)
T ss_pred cCCcHHHEEECCCCCEEEeeCcCC
Confidence 788999999999999999999975
No 105
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=45.47 E-value=20 Score=33.40 Aligned_cols=34 Identities=18% Similarity=0.242 Sum_probs=27.0
Q ss_pred HHhccCCCCCCceEEec-CCcEEEEeccccccCCC
Q psy8358 221 YLLQVKDRHNGNILLSG-EGHLIHIDFGFILSLSP 254 (424)
Q Consensus 221 yiLgigDRH~~NIli~~-~G~~~HIDFg~~fg~~~ 254 (424)
.++-=||=|.+|||++. ++.+.=|||-++--..|
T Consensus 170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~ 204 (235)
T cd05157 170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYR 204 (235)
T ss_pred EEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCch
Confidence 45556999999999998 68899999976644433
No 106
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=45.45 E-value=18 Score=33.45 Aligned_cols=48 Identities=31% Similarity=0.454 Sum_probs=32.8
Q ss_pred cCCCCCCceEEecCCcEEEEecccccc--CCCCCCC-CCCCCccccHHHHH
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILS--LSPRNLG-FETSPFKLTLEVVE 272 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg--~~~~~~~-~E~vPFrLT~~~~~ 272 (424)
=+|=.++|||++.+|++.-+|||...- ....... .-..|.=..||++.
T Consensus 121 H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 171 (260)
T PF00069_consen 121 HRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQ 171 (260)
T ss_dssp ESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 378889999999999999999999863 2121111 12344456677755
No 107
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=45.19 E-value=18 Score=36.10 Aligned_cols=26 Identities=35% Similarity=0.609 Sum_probs=23.5
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=.++|||++.+|++.-+|||..-.
T Consensus 155 rDLkp~NILl~~~~~ikL~DFG~a~~ 180 (340)
T PTZ00426 155 RDLKPENLLLDKDGFIKMTDFGFAKV 180 (340)
T ss_pred cCCCHHHEEECCCCCEEEecCCCCee
Confidence 78899999999999999999998643
No 108
>PRK11768 serine/threonine protein kinase; Provisional
Probab=44.64 E-value=48 Score=33.05 Aligned_cols=30 Identities=33% Similarity=0.340 Sum_probs=22.7
Q ss_pred HHHHhccCCCCCCceEEecCCcEEEEeccccc
Q psy8358 219 VCYLLQVKDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 219 ~~yiLgigDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
..+.+==||=|++|||++ +| +.-|||+.+-
T Consensus 194 ~~~~liHgD~h~~NvL~~-d~-~~iIDFDd~~ 223 (325)
T PRK11768 194 VRLLRLHGDCHPGNILWR-DG-PHFVDLDDAR 223 (325)
T ss_pred CCccceecCCCchhcccc-CC-cEEEeCCCCC
Confidence 355566799999999995 44 5669998763
No 109
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=44.52 E-value=21 Score=32.99 Aligned_cols=84 Identities=18% Similarity=0.118 Sum_probs=43.8
Q ss_pred eecceEEEecCCCceeeeeC-CcccHHHHHhhccccHHHHHHHHhCCCChHH-HHHHHHHHHHHhhHHHHHHHHhcc--C
Q psy8358 151 LHPYKILCLSNDSGLIEPIL-NTVSLHQIKKNSQVSLLEYFIQEFGDINSEG-FLAAQKNFVQSTAAYSLVCYLLQV--K 226 (424)
Q Consensus 151 l~~Y~vip~~~~~GlIE~v~-~~~tl~~i~~~~~~~l~~~~~~~~~~~~~~~-~~~~r~~F~~SlA~~sv~~yiLgi--g 226 (424)
+...+++..+.+.=++|+|+ +..++..+....- .+..+.. +.+... ...-+-.-.|| |
T Consensus 70 v~vP~p~~~~~~~ivME~I~~~G~~~~~l~~~~~-----------~~~~~~~~~~~il~-------~~~~~~~~~givHG 131 (188)
T PF01163_consen 70 VPVPKPYDYNRNVIVMEYIGEDGVPLPRLKDVDL-----------SPEEPKELLEEILE-------EIIKMLHKAGIVHG 131 (188)
T ss_dssp -SS--EEEEETTEEEEE--EETTEEGGCHHHCGG-----------GGSTHHHHHHHHHH-------HHHHHHHCTTEEES
T ss_pred ccCCcEEEEeCCEEEEEecCCCccchhhHHhccc-----------cchhHHHHHHHHHH-------HHHHHHHhcCceec
Confidence 45567778899999999998 4555555543210 0011111 111111 01111112344 8
Q ss_pred CCCCCceEEecCCcEEEEeccccccCC
Q psy8358 227 DRHNGNILLSGEGHLIHIDFGFILSLS 253 (424)
Q Consensus 227 DRH~~NIli~~~G~~~HIDFg~~fg~~ 253 (424)
|=+..|||++.+ +++=||||-.....
T Consensus 132 DLs~~NIlv~~~-~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 132 DLSEYNILVDDG-KVYIIDFGQAVDSS 157 (188)
T ss_dssp S-STTSEEEETT-CEEE--GTTEEETT
T ss_pred CCChhhEEeecc-eEEEEecCcceecC
Confidence 999999999977 89999999887775
No 110
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=44.46 E-value=2.4e+02 Score=25.36 Aligned_cols=52 Identities=29% Similarity=0.438 Sum_probs=37.2
Q ss_pred hccCCCCCCceEEecCCcEEEEeccccccCCCCC--CCCCCCCccccHHHHHHh
Q psy8358 223 LQVKDRHNGNILLSGEGHLIHIDFGFILSLSPRN--LGFETSPFKLTLEVVEVF 274 (424)
Q Consensus 223 LgigDRH~~NIli~~~G~~~HIDFg~~fg~~~~~--~~~E~vPFrLT~~~~~~m 274 (424)
+--||-+++||+++.+|.+.=+|||......+.. ..+...+.-+.||++...
T Consensus 119 i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~ 172 (253)
T cd05122 119 IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGK 172 (253)
T ss_pred EecCCCCHHHEEEccCCeEEEeeccccccccccccccceecCCcccCHHHHcCC
Confidence 4568999999999999999999999886665532 222234445677776443
No 111
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=44.26 E-value=2.1e+02 Score=27.45 Aligned_cols=25 Identities=24% Similarity=0.436 Sum_probs=22.7
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|-+++|||++.+|.+.=+|||..-
T Consensus 164 ~dlkp~Nill~~~~~~kL~dfg~a~ 188 (307)
T cd05098 164 RDLAARNVLVTEDNVMKIADFGLAR 188 (307)
T ss_pred ccccHHheEEcCCCcEEECCCcccc
Confidence 7888999999999999999999764
No 112
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=44.20 E-value=12 Score=37.25 Aligned_cols=25 Identities=36% Similarity=0.642 Sum_probs=23.2
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=+++||||+.+|++.-+|||.+-
T Consensus 125 rDLkp~NIli~~~~~vkL~DfG~~~ 149 (360)
T cd05627 125 RDIKPDNLLLDAKGHVKLSDFGLCT 149 (360)
T ss_pred cCCCHHHEEECCCCCEEEeeccCCc
Confidence 7889999999999999999999864
No 113
>KOG0603|consensus
Probab=44.13 E-value=15 Score=39.79 Aligned_cols=31 Identities=42% Similarity=0.593 Sum_probs=26.7
Q ss_pred cCCCCCCceEEe-cCCcEEEEeccccccCCCC
Q psy8358 225 VKDRHNGNILLS-GEGHLIHIDFGFILSLSPR 255 (424)
Q Consensus 225 igDRH~~NIli~-~~G~~~HIDFg~~fg~~~~ 255 (424)
.+|=|++|||++ ..|++-=+|||+.-+..+.
T Consensus 438 hRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 438 HRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred ecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 589999999995 7999999999998766543
No 114
>KOG0906|consensus
Probab=44.12 E-value=12 Score=40.68 Aligned_cols=40 Identities=20% Similarity=0.498 Sum_probs=34.3
Q ss_pred HHHHHhhhhcCCCCCHHHHHHHHHHHhhcccccccccccc
Q psy8358 375 ATVQNLKNRFHMNLTEEQLQVLIDKLVDTSIHSLSTKLYD 414 (424)
Q Consensus 375 ~~i~~Lr~Rf~~~lse~qv~~~i~~~id~s~~~~~tk~Yd 414 (424)
.+|-.+++||.++|||+.+-.+.+++|+.|.++..+..-|
T Consensus 794 k~I~kvqeRfrLdmSde~A~~~fq~lI~~SV~AL~~~v~d 833 (843)
T KOG0906|consen 794 KAILKVQERFRLDMSDEAATKHFQKLINESVNALFPQVVD 833 (843)
T ss_pred hhhHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678889999999999999999999999999877655433
No 115
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=43.94 E-value=13 Score=36.54 Aligned_cols=25 Identities=36% Similarity=0.643 Sum_probs=22.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=+++|||++.+|.+.-+|||..-
T Consensus 125 ~dlkp~Nill~~~~~~kL~Dfg~~~ 149 (324)
T cd05587 125 RDLKLDNVMLDAEGHIKIADFGMCK 149 (324)
T ss_pred cCCCHHHeEEcCCCCEEEeecCcce
Confidence 7899999999999999999999753
No 116
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=43.74 E-value=75 Score=29.40 Aligned_cols=27 Identities=26% Similarity=0.283 Sum_probs=24.1
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
||=+++||+++.+|.+.=+|||.....
T Consensus 126 ~di~p~Nili~~~~~~~l~d~g~~~~~ 152 (256)
T cd05039 126 RDLAARNVLVSEDLVAKVSDFGLAKEA 152 (256)
T ss_pred hhcccceEEEeCCCCEEEccccccccc
Confidence 799999999999999999999977655
No 117
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=43.72 E-value=56 Score=30.58 Aligned_cols=27 Identities=26% Similarity=0.229 Sum_probs=23.8
Q ss_pred cCCCCCCceEEecCCcEEEEecccccc
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
-+|-+++|||++.+|++.=+|||..-.
T Consensus 129 h~dlkp~nili~~~~~~~l~dfg~~~~ 155 (267)
T cd05066 129 HRDLAARNILVNSNLVCKVSDFGLSRV 155 (267)
T ss_pred ehhhchhcEEECCCCeEEeCCCCcccc
Confidence 389999999999999999999997654
No 118
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=43.65 E-value=68 Score=29.68 Aligned_cols=27 Identities=33% Similarity=0.374 Sum_probs=24.0
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
||=+++||+++.+|.+.=+|||.....
T Consensus 124 ~dl~p~nili~~~~~~kl~Dfg~~~~~ 150 (254)
T cd05083 124 RDLAARNILVSEDGVAKVSDFGLARVG 150 (254)
T ss_pred cccCcceEEEcCCCcEEECCCccceec
Confidence 899999999999999999999987543
No 119
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=43.53 E-value=11 Score=35.35 Aligned_cols=30 Identities=37% Similarity=0.497 Sum_probs=25.6
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccCCC
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSLSP 254 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~~~ 254 (424)
-||=+++||+++.+|++..+|||.......
T Consensus 125 H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 125 HRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred ecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 379999999999999999999998765443
No 120
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=43.34 E-value=69 Score=29.56 Aligned_cols=26 Identities=27% Similarity=0.334 Sum_probs=23.2
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||=+++|||++.+|++.=+|||..-.
T Consensus 118 ~dl~p~nil~~~~~~~kl~dfg~~~~ 143 (252)
T cd05084 118 RDLAARNCLVTEKNVLKISDFGMSRE 143 (252)
T ss_pred cccchheEEEcCCCcEEECccccCcc
Confidence 78899999999999999999997643
No 121
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=43.09 E-value=3.2e+02 Score=26.54 Aligned_cols=26 Identities=23% Similarity=0.425 Sum_probs=22.3
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=.++|||++.+|.+.=+|||..-.
T Consensus 158 ~dlkp~Nill~~~~~~kL~Dfg~~~~ 183 (334)
T cd05100 158 RDLAARNVLVTEDNVMKIADFGLARD 183 (334)
T ss_pred cccccceEEEcCCCcEEECCccccee
Confidence 57779999999999999999997643
No 122
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=43.00 E-value=67 Score=31.58 Aligned_cols=49 Identities=24% Similarity=0.401 Sum_probs=32.0
Q ss_pred CCCCCCceEEecCCcEEEEeccccccCCCCCC-C---CCCCCccccHHHHHHh
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSLSPRNL-G---FETSPFKLTLEVVEVF 274 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~~~~~~-~---~E~vPFrLT~~~~~~m 274 (424)
+|=.++||||+.+|++.=+|||.......... . .--.|.-+.||+...+
T Consensus 126 rDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 178 (331)
T cd05624 126 RDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAM 178 (331)
T ss_pred ccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhcc
Confidence 68889999999999999999998654332111 0 0112344567776543
No 123
>COG5032 TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion]
Probab=42.36 E-value=6 Score=49.41 Aligned_cols=41 Identities=22% Similarity=0.465 Sum_probs=22.6
Q ss_pred HHHHhhhhcCCCCC------------HHHHHHHHHHHhhccccccccccccccccc
Q psy8358 376 TVQNLKNRFHMNLT------------EEQLQVLIDKLVDTSIHSLSTKLYDGFQYY 419 (424)
Q Consensus 376 ~i~~Lr~Rf~~~ls------------e~qv~~~i~~~id~s~~~~~tk~Yd~~q~~ 419 (424)
++.++++||...++ +++++.++.+|+|+.+ +..+|.||+||
T Consensus 2052 ~~~~v~~rf~~kl~~~~~~~~~~l~I~~sv~~li~~a~d~~~---L~~~yi~w~~f 2104 (2105)
T COG5032 2052 EIVNVLERFRLKLSEKDAEKFVDLLINKSVESLITQATDPFQ---LATMYIGWMPF 2104 (2105)
T ss_pred HHHHHHHHHHHHhhhhhhhhhcCCcHHHHHHHHHHHHcCHHH---HHhhccccccC
Confidence 44455566665544 5555555555555544 35555555554
No 124
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=42.32 E-value=52 Score=34.56 Aligned_cols=26 Identities=35% Similarity=0.491 Sum_probs=23.6
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=+++||||+.+|.+.=+|||..-.
T Consensus 193 rDlkp~NIll~~~~~~kL~DFgla~~ 218 (478)
T PTZ00267 193 RDLKSANIFLMPTGIIKLGDFGFSKQ 218 (478)
T ss_pred CCcCHHhEEECCCCcEEEEeCcCcee
Confidence 79999999999999999999998653
No 125
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=41.90 E-value=28 Score=33.27 Aligned_cols=47 Identities=28% Similarity=0.449 Sum_probs=31.4
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccCCCCCCCCCCCCccccHHHH
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSLSPRNLGFETSPFKLTLEVV 271 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~~~~~~~~E~vPFrLT~~~~ 271 (424)
-||=+++||+|+.+|.+.-+|||+.-............|.-..|++.
T Consensus 124 H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~ 170 (290)
T cd05580 124 YRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEII 170 (290)
T ss_pred cCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCCCccccChhhh
Confidence 48999999999999999999999765543321111122334556654
No 126
>KOG1235|consensus
Probab=41.20 E-value=21 Score=38.49 Aligned_cols=29 Identities=31% Similarity=0.578 Sum_probs=23.7
Q ss_pred CCCCCCceEEec----CCcEEEEeccccccCCC
Q psy8358 226 KDRHNGNILLSG----EGHLIHIDFGFILSLSP 254 (424)
Q Consensus 226 gDRH~~NIli~~----~G~~~HIDFg~~fg~~~ 254 (424)
+|=|+|||++++ +++++--|||..-.-.+
T Consensus 325 aDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 325 ADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred CCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 699999999993 78999999987754433
No 127
>PF07804 HipA_C: HipA-like C-terminal domain; InterPro: IPR012893 The members of this entry are similar to a region close to the C terminus of the HipA protein expressed by various bacterial species (for example P23874 from SWISSPROT). This protein is known to be involved in high-frequency persistence to the lethal effects of inhibition of either DNA or peptidoglycan synthesis []. When expressed alone, it is toxic to bacterial cells [], but it is usually tightly associated with HipB [], and the HipA-HipB complex may be involved in autoregulation of the hip operon. The hip proteins may be involved in cell division control and may interact with cell division genes or their products []. ; PDB: 3AKL_D 3AKJ_B 3AKK_D 2WIU_C 3HZI_A 3DNT_B 3FBR_A 3DNU_A 3DNV_A.
Probab=40.97 E-value=24 Score=27.44 Aligned_cols=30 Identities=23% Similarity=0.154 Sum_probs=21.1
Q ss_pred HHHHHhhHHHHHHHHhccCCCCCCceEEec
Q psy8358 208 NFVQSTAAYSLVCYLLQVKDRHNGNILLSG 237 (424)
Q Consensus 208 ~F~~SlA~~sv~~yiLgigDRH~~NIli~~ 237 (424)
.-.+.+.-+-++.+++|=+|||..|+=+=.
T Consensus 38 ~~~~~l~~~~~fn~ligN~D~H~kN~s~l~ 67 (79)
T PF07804_consen 38 ADVRELFRRLVFNYLIGNTDRHLKNFSFLY 67 (79)
T ss_dssp HHHHHHHHHHHHHHHCTBS---CCCSEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCcCCcCCEEEEE
Confidence 344566777889999999999999986643
No 128
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=40.76 E-value=1.2e+02 Score=32.35 Aligned_cols=25 Identities=28% Similarity=0.413 Sum_probs=21.8
Q ss_pred cCCCCCCceEEecCCcEEEEeccccc
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
=||=+++|||+ .+|++.=||||..-
T Consensus 451 HrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 451 HGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred cCCCChHHEEE-ECCcEEEEeCcccc
Confidence 37999999999 68899999999763
No 129
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=40.26 E-value=80 Score=29.86 Aligned_cols=29 Identities=41% Similarity=0.639 Sum_probs=25.1
Q ss_pred hcc--CCCCCCceEEecCCcEEEEecccccc
Q psy8358 223 LQV--KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 223 Lgi--gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
.|+ ||=+++||+++.+|++.=+|||+...
T Consensus 135 ~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~ 165 (286)
T cd06614 135 QNVIHRDIKSDNILLSKDGSVKLADFGFAAQ 165 (286)
T ss_pred CCeeeCCCChhhEEEcCCCCEEECccchhhh
Confidence 455 89999999999999999999997654
No 130
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=40.17 E-value=18 Score=33.41 Aligned_cols=29 Identities=31% Similarity=0.583 Sum_probs=20.1
Q ss_pred HHhccCCCCCCceEE-ecCCcEEEEecccc
Q psy8358 221 YLLQVKDRHNGNILL-SGEGHLIHIDFGFI 249 (424)
Q Consensus 221 yiLgigDRH~~NIli-~~~G~~~HIDFg~~ 249 (424)
.++-=+|=|++|||+ +.+|++.=|||-|+
T Consensus 143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya 172 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINNKDGEVKLIDFEYA 172 (211)
T ss_dssp EEEE-S--SGGGEEETSSSSCEEE--GTT-
T ss_pred ceEeeccCccccEEeccCCCeEEEecHHHH
Confidence 567779999999999 56999999999765
No 131
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=40.04 E-value=76 Score=31.14 Aligned_cols=49 Identities=27% Similarity=0.399 Sum_probs=32.1
Q ss_pred CCCCCCceEEecCCcEEEEeccccccCCCCCC--C--CCCCCccccHHHHHHh
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSLSPRNL--G--FETSPFKLTLEVVEVF 274 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~~~~~~--~--~E~vPFrLT~~~~~~m 274 (424)
+|=.++|||++.+|++.=+|||.......... . .--.|.-+.||++..+
T Consensus 126 rDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 178 (332)
T cd05623 126 RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM 178 (332)
T ss_pred cCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhcc
Confidence 78889999999999999999998653221110 0 0113344677776543
No 132
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=40.00 E-value=90 Score=29.05 Aligned_cols=104 Identities=24% Similarity=0.284 Sum_probs=60.7
Q ss_pred CchhhHHHHHHHHHHHHHHHHhCCCCcee--ecceEEEecCCCcee-eeeCCcccHHHHHhhccccHHHHHHHHhCCCCh
Q psy8358 123 DDLRQELLASQLLTLLQKIWDIERVPLIL--HPYKILCLSNDSGLI-EPILNTVSLHQIKKNSQVSLLEYFIQEFGDINS 199 (424)
Q Consensus 123 dDLRqD~~~~Q~~~~~~~i~~~~~~~l~l--~~Y~vip~~~~~GlI-E~v~~~~tl~~i~~~~~~~l~~~~~~~~~~~~~ 199 (424)
++.|.|..--..... ..+..... +.|..+.|+...|++ |-|.|..- ....+|.+|+.+. .- .
T Consensus 56 ~~~~~E~~~y~~l~~------~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG------~~s~TL~~~l~~~--~~-~ 120 (199)
T PF10707_consen 56 RQNRRELRYYKQLSL------RRGVDWSHIPRFYGFVETNLGLGLVVELIRDADG------NISPTLEDYLKEG--GL-T 120 (199)
T ss_pred HHHHHHHHHHHHHhh------ccCCcccccccEeEEEecCCceEEEEEEEECCCC------CcCccHHHHHHcC--Cc-c
Confidence 455666554444333 22222222 559999999988876 55554210 0112444444321 11 2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhccCCCCCCceEEec--CC--cEEEEec
Q psy8358 200 EGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNILLSG--EG--HLIHIDF 246 (424)
Q Consensus 200 ~~~~~~r~~F~~SlA~~sv~~yiLgigDRH~~NIli~~--~G--~~~HIDF 246 (424)
+...++-+.|..-+....|+ +.|=+++||++.. +| ++|=||-
T Consensus 121 ~~~~~~L~~f~~~l~~~~Iv-----~~dl~~~NIv~~~~~~~~~~lvlIDG 166 (199)
T PF10707_consen 121 EELRQALDEFKRYLLDHHIV-----IRDLNPHNIVVQRRDSGEFRLVLIDG 166 (199)
T ss_pred HHHHHHHHHHHHHHHHcCCe-----ecCCCcccEEEEecCCCceEEEEEeC
Confidence 25677778888777666555 3589999999985 44 4888885
No 133
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=39.71 E-value=28 Score=33.46 Aligned_cols=27 Identities=48% Similarity=0.743 Sum_probs=23.6
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
||=.++|||++.+|.+.=+|||..-..
T Consensus 125 ~dlkp~NIli~~~~~~kl~Dfg~~~~~ 151 (291)
T cd05612 125 RDLKPENILLDKEGHIKLTDFGFAKKL 151 (291)
T ss_pred cCCCHHHeEECCCCCEEEEecCcchhc
Confidence 688899999999999999999986543
No 134
>KOG0696|consensus
Probab=39.67 E-value=18 Score=37.67 Aligned_cols=27 Identities=33% Similarity=0.560 Sum_probs=23.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
.|--+||+|+|.+||+=-.|||.+=++
T Consensus 474 RDLKLDNvmLd~eGHiKi~DFGmcKEn 500 (683)
T KOG0696|consen 474 RDLKLDNVMLDSEGHIKIADFGMCKEN 500 (683)
T ss_pred eeccccceEeccCCceEeeeccccccc
Confidence 578899999999999999999987544
No 135
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=39.54 E-value=59 Score=30.37 Aligned_cols=27 Identities=30% Similarity=0.313 Sum_probs=24.3
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
||=+++||+|+.+|.+.-+|||.....
T Consensus 130 ~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 130 RDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred CCCCcceEEEcCCCCEEECccchhhcc
Confidence 688999999999999999999987654
No 136
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=39.26 E-value=25 Score=34.60 Aligned_cols=47 Identities=32% Similarity=0.518 Sum_probs=31.1
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccCCCCCCCCCCCCccccHHHH
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSLSPRNLGFETSPFKLTLEVV 271 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~~~~~~~~E~vPFrLT~~~~ 271 (424)
-+|=.++||||+.+|++.=+|||+.-............|.=+.||++
T Consensus 141 H~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~ 187 (329)
T PTZ00263 141 YRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVI 187 (329)
T ss_pred ecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecCChhhcCHHHH
Confidence 47889999999999999999999875433222211122333456654
No 137
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=39.25 E-value=69 Score=29.99 Aligned_cols=25 Identities=24% Similarity=0.218 Sum_probs=22.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|-.++|||++.+|++.=+|||..-
T Consensus 124 ~dlkp~nil~~~~~~~kL~dfg~~~ 148 (269)
T cd05087 124 SDLALRNCLLTADLTVKIGDYGLSH 148 (269)
T ss_pred cccCcceEEEcCCCcEEECCccccc
Confidence 7889999999999999999999764
No 138
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=38.87 E-value=17 Score=36.40 Aligned_cols=24 Identities=38% Similarity=0.717 Sum_probs=22.7
Q ss_pred CCCCCCceEEecCCcEEEEecccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
+|=.++|||++.+|++.-+|||.+
T Consensus 125 rDlkp~Nill~~~~~ikL~DFG~a 148 (376)
T cd05598 125 RDIKPDNILIDRDGHIKLTDFGLC 148 (376)
T ss_pred CCCCHHHEEECCCCCEEEEeCCCC
Confidence 899999999999999999999985
No 139
>KOG0984|consensus
Probab=38.78 E-value=22 Score=33.89 Aligned_cols=23 Identities=35% Similarity=0.627 Sum_probs=21.0
Q ss_pred CCCCCCceEEecCCcEEEEeccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGF 248 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~ 248 (424)
.|=-++||||+.+|++=-+|||.
T Consensus 173 RDvKPsNiLIn~~GqVKiCDFGI 195 (282)
T KOG0984|consen 173 RDVKPSNILINYDGQVKICDFGI 195 (282)
T ss_pred ccCCcceEEEccCCcEEEccccc
Confidence 57789999999999999999964
No 140
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=38.63 E-value=3.5e+02 Score=25.70 Aligned_cols=26 Identities=23% Similarity=0.402 Sum_probs=23.2
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|-.++||+++.+|.+.=+|||..-.
T Consensus 161 ~dlkp~Nili~~~~~~kl~D~g~~~~ 186 (304)
T cd05101 161 RDLAARNVLVTENNVMKIADFGLARD 186 (304)
T ss_pred cccccceEEEcCCCcEEECCCcccee
Confidence 68899999999999999999998653
No 141
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=38.60 E-value=20 Score=34.68 Aligned_cols=25 Identities=32% Similarity=0.608 Sum_probs=22.7
Q ss_pred cCCCCCCceEEecCCcEEEEecccc
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
-||=|++||+++.+|.+.-+|||..
T Consensus 124 H~dl~p~NIll~~~~~~~l~dfg~~ 148 (305)
T cd05609 124 HRDLKPDNLLITSMGHIKLTDFGLS 148 (305)
T ss_pred ccCCchHHEEECCCCCEEEeeCCCc
Confidence 3788999999999999999999964
No 142
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=38.51 E-value=24 Score=34.43 Aligned_cols=32 Identities=28% Similarity=0.371 Sum_probs=23.8
Q ss_pred hccCCCCCCceEEecCCcEE-EEeccccccCCC
Q psy8358 223 LQVKDRHNGNILLSGEGHLI-HIDFGFILSLSP 254 (424)
Q Consensus 223 LgigDRH~~NIli~~~G~~~-HIDFg~~fg~~~ 254 (424)
|==||=|++|||++.+|++. =|||+.+-=-+|
T Consensus 187 lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDP 219 (276)
T cd05152 187 LVHGDLHPGHILIDEDARVTGLIDWTEAKVGDP 219 (276)
T ss_pred eEeCCCCCCcEEEeCCCCEEEEECcHhcccCCH
Confidence 33499999999999767764 789987543333
No 143
>KOG0694|consensus
Probab=38.42 E-value=21 Score=39.25 Aligned_cols=107 Identities=20% Similarity=0.325 Sum_probs=59.8
Q ss_pred CCchhhHHHHHHHHHHHHHHHHhC-CCCceeecceEEEecCC-CceeeeeCCcccHHHHHhhccccHHHHHHHHhCCCCh
Q psy8358 122 GDDLRQELLASQLLTLLQKIWDIE-RVPLILHPYKILCLSND-SGLIEPILNTVSLHQIKKNSQVSLLEYFIQEFGDINS 199 (424)
Q Consensus 122 gdDLRqD~~~~Q~~~~~~~i~~~~-~~~l~l~~Y~vip~~~~-~GlIE~v~~~~tl~~i~~~~~~~l~~~~~~~~~~~~~ 199 (424)
.|+.=||--+.++..- .+|+.-. +-+.-...|.+.-|... .=++|++.+.. +..++. .
T Consensus 403 K~~Il~~d~Ve~~~~E-krI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggd-m~~~~~------------------~ 462 (694)
T KOG0694|consen 403 KGDILQRDEVESLMCE-KRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGD-LMHHIH------------------T 462 (694)
T ss_pred ccceeccccHHHHHHH-HHHHHHhccCCeEeecccccccCCeEEEEEEecCCCc-EEEEEe------------------c
Confidence 3444444444444322 2233222 34555677888777765 45678887654 322221 1
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhc--c--CCCCCCceEEecCCcEEEEecccc
Q psy8358 200 EGFLAAQKNFVQSTAAYSLVCYLLQ--V--KDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 200 ~~~~~~r~~F~~SlA~~sv~~yiLg--i--gDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
..|-++|-.|..-+ +.+.+.|+=. | .|=-+||||+|.+||+==+|||.+
T Consensus 463 ~~F~e~rarfyaAe-v~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlc 515 (694)
T KOG0694|consen 463 DVFSEPRARFYAAE-VVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLC 515 (694)
T ss_pred ccccHHHHHHHHHH-HHHHHHHHHhcCceeeecchhheEEcccCcEEecccccc
Confidence 23445555554322 2223333322 1 488899999999999999999987
No 144
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=38.13 E-value=72 Score=29.97 Aligned_cols=25 Identities=28% Similarity=0.502 Sum_probs=22.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||=+++|||++.+|.+.=+|||..-
T Consensus 128 ~dlkp~nil~~~~~~~kl~dfg~~~ 152 (283)
T cd06617 128 RDVKPSNVLINRNGQVKLCDFGISG 152 (283)
T ss_pred CCCCHHHEEECCCCCEEEeeccccc
Confidence 8999999999999999999999753
No 145
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=38.02 E-value=20 Score=33.91 Aligned_cols=28 Identities=36% Similarity=0.515 Sum_probs=24.6
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccC
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
-||-+++||+++.+|++.-+|||..-..
T Consensus 124 H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 151 (277)
T cd06640 124 HRDIKAANVLLSEQGDVKLADFGVAGQL 151 (277)
T ss_pred CcCCChhhEEEcCCCCEEEcccccceec
Confidence 3899999999999999999999987443
No 146
>PRK10345 hypothetical protein; Provisional
Probab=37.85 E-value=1.2e+02 Score=28.44 Aligned_cols=22 Identities=18% Similarity=-0.022 Sum_probs=18.1
Q ss_pred cCCCCCCceEEecC----CcEEEEec
Q psy8358 225 VKDRHNGNILLSGE----GHLIHIDF 246 (424)
Q Consensus 225 igDRH~~NIli~~~----G~~~HIDF 246 (424)
-.|=.++|||+++. ++++=|||
T Consensus 128 hrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 128 TMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred ecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 57889999999852 37999995
No 147
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=37.70 E-value=97 Score=29.06 Aligned_cols=25 Identities=20% Similarity=0.138 Sum_probs=22.7
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|-.++|||++.+|++.=+|||...
T Consensus 123 ~dikp~nil~~~~~~~~l~Dfg~~~ 147 (268)
T cd05086 123 SDLALRNCFLTSDLTVKVGDYGIGP 147 (268)
T ss_pred cCCccceEEEcCCccEEeccccccc
Confidence 7889999999999999999999764
No 148
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=37.59 E-value=25 Score=34.46 Aligned_cols=25 Identities=32% Similarity=0.602 Sum_probs=23.0
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++||||+.+|.+.=+|||..-
T Consensus 120 rDikp~NIll~~~~~~kL~Dfg~~~ 144 (325)
T cd05594 120 RDLKLENLMLDKDGHIKITDFGLCK 144 (325)
T ss_pred cCCCCCeEEECCCCCEEEecCCCCe
Confidence 8999999999999999999999753
No 149
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=37.58 E-value=90 Score=29.37 Aligned_cols=25 Identities=28% Similarity=0.486 Sum_probs=22.5
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=+++|||++.+|++.=+|||..-
T Consensus 133 ~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 133 RDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred cccccceEEEcCCCcEEECCCCcee
Confidence 8999999999999999999999753
No 150
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=37.56 E-value=45 Score=32.10 Aligned_cols=27 Identities=33% Similarity=0.577 Sum_probs=23.9
Q ss_pred cCCCCCCceEEecCCcEEEEecccccc
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
-||=+++||+++.+|++.=+|||+...
T Consensus 139 H~dl~p~Nilv~~~~~~~l~dfg~~~~ 165 (292)
T cd06657 139 HRDIKSDSILLTHDGRVKLSDFGFCAQ 165 (292)
T ss_pred cCCCCHHHEEECCCCCEEEccccccee
Confidence 499999999999999999899997643
No 151
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=37.33 E-value=17 Score=35.66 Aligned_cols=26 Identities=35% Similarity=0.620 Sum_probs=23.4
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=.++|||++.+|++.=+|||..-.
T Consensus 125 rDlkp~Nill~~~~~~kL~DfG~~~~ 150 (323)
T cd05616 125 RDLKLDNVMLDSEGHIKIADFGMCKE 150 (323)
T ss_pred cCCCHHHeEECCCCcEEEccCCCcee
Confidence 78899999999999999999997643
No 152
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=37.26 E-value=27 Score=33.91 Aligned_cols=29 Identities=28% Similarity=0.309 Sum_probs=24.5
Q ss_pred HHHhccCCCCCCceEEecCCcEEEEecccc
Q psy8358 220 CYLLQVKDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 220 ~yiLgigDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
.+.+-=||=|.+|||++. |.+.-|||+.+
T Consensus 186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~ 214 (313)
T TIGR02906 186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYC 214 (313)
T ss_pred cCceEcCCCCcccEEEeC-CcEEEEECccc
Confidence 355678999999999998 78999999865
No 153
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=37.08 E-value=28 Score=33.11 Aligned_cols=32 Identities=22% Similarity=0.231 Sum_probs=25.7
Q ss_pred HhccCCCCCCceEEecCCcEEEEeccccccCCC
Q psy8358 222 LLQVKDRHNGNILLSGEGHLIHIDFGFILSLSP 254 (424)
Q Consensus 222 iLgigDRH~~NIli~~~G~~~HIDFg~~fg~~~ 254 (424)
.+-=||=|++|||++.+| +.=|||.+.--..|
T Consensus 147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~gdp 178 (256)
T TIGR02721 147 APLHMDVHAYNLVVTPQG-LKLIDWEYASDGDI 178 (256)
T ss_pred eeecCCCCcCcEEEeCCC-CEEEeccccCcCCH
Confidence 344499999999999877 78999988765554
No 154
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=36.97 E-value=20 Score=34.96 Aligned_cols=25 Identities=40% Similarity=0.624 Sum_probs=22.5
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=+++|||++.+|++.=+|||..-
T Consensus 117 rDlkp~Nili~~~~~~kl~Dfg~~~ 141 (312)
T cd05585 117 RDLKPENILLDYQGHIALCDFGLCK 141 (312)
T ss_pred CCCCHHHeEECCCCcEEEEECcccc
Confidence 6888999999999999999999753
No 155
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=36.85 E-value=1.9e+02 Score=26.33 Aligned_cols=47 Identities=23% Similarity=0.196 Sum_probs=32.4
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccCCCCCCC-CCCCCccccHHHH
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSLSPRNLG-FETSPFKLTLEVV 271 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~~~~~~~-~E~vPFrLT~~~~ 271 (424)
-||=+++||+++.+|.+.-+|||...-....... ....|.-+.|++.
T Consensus 126 h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~ 173 (256)
T cd08530 126 HRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVW 173 (256)
T ss_pred cCCCCcceEEEecCCcEEEeeccchhhhccCCcccccCCccccCHHHH
Confidence 4788999999999999999999977554332111 1124455666665
No 156
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=36.80 E-value=1.1e+02 Score=28.64 Aligned_cols=25 Identities=28% Similarity=0.329 Sum_probs=22.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=+++||+++.+|.+.=+|||...
T Consensus 126 ~dl~p~Nill~~~~~~~L~dfg~~~ 150 (262)
T cd05071 126 RDLRAANILVGENLVCKVADFGLAR 150 (262)
T ss_pred cccCcccEEEcCCCcEEeccCCcee
Confidence 7889999999999999999999874
No 157
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=36.76 E-value=34 Score=33.57 Aligned_cols=27 Identities=30% Similarity=0.585 Sum_probs=23.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
||=+++|||++.+|++.=+|||..-..
T Consensus 125 ~dlkp~Nil~~~~~~~kL~Dfg~a~~~ 151 (333)
T cd05600 125 RDLKPENFLIDASGHIKLTDFGLSKGI 151 (333)
T ss_pred cCCCHHHEEECCCCCEEEEeCcCCccc
Confidence 789999999999999999999977543
No 158
>KOG0592|consensus
Probab=36.64 E-value=22 Score=38.10 Aligned_cols=33 Identities=36% Similarity=0.474 Sum_probs=26.0
Q ss_pred HHHHHhccC----CCCCCceEEecCCcEEEEeccccc
Q psy8358 218 LVCYLLQVK----DRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 218 v~~yiLgig----DRH~~NIli~~~G~~~HIDFg~~f 250 (424)
.+-|+=+.| |=-++|||||++||+-=.|||-.=
T Consensus 186 AleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 186 ALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred HHHHHHhcCceeccCChhheeEcCCCcEEEeeccccc
Confidence 345555554 667899999999999999999753
No 159
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=36.58 E-value=77 Score=29.84 Aligned_cols=25 Identities=32% Similarity=0.554 Sum_probs=22.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||=+++|||++.+|.+.=+|||..-
T Consensus 123 ~dl~~~nil~~~~~~~~l~dfg~~~ 147 (284)
T cd07839 123 RDLKPQNLLINKNGELKLADFGLAR 147 (284)
T ss_pred CCCCHHHEEEcCCCcEEECccchhh
Confidence 8889999999999999999999764
No 160
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=36.50 E-value=3.9e+02 Score=25.63 Aligned_cols=26 Identities=27% Similarity=0.405 Sum_probs=23.0
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=.++|||++.+|.+.=+|||..-.
T Consensus 133 ~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 133 RDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred cccchhheEecCCCcEEEcccccccc
Confidence 78889999999999999999998753
No 161
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=36.15 E-value=20 Score=35.20 Aligned_cols=25 Identities=44% Similarity=0.713 Sum_probs=22.6
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++||||+.+|++.=+|||..-
T Consensus 129 rDlkp~Nili~~~~~~kl~DfG~~~ 153 (332)
T cd05614 129 RDIKLENILLDSEGHVVLTDFGLSK 153 (332)
T ss_pred cCCCHHHeEECCCCCEEEeeCcCCc
Confidence 7888999999999999999999753
No 162
>KOG0173|consensus
Probab=35.97 E-value=32 Score=33.16 Aligned_cols=44 Identities=20% Similarity=0.283 Sum_probs=33.0
Q ss_pred hhhHHHhhcchhhhHHHHHhhhhcCCCCCHHHHHHHHHHHhhccc
Q psy8358 361 DGFQYYTNAFQYIAATVQNLKNRFHMNLTEEQLQVLIDKLVDTSI 405 (424)
Q Consensus 361 d~~Q~~~nGI~~~~~~i~~Lr~Rf~~~lse~qv~~~i~~~id~s~ 405 (424)
|.+++..-|-=. -.++.-|.+||.++|+++|+..|+.+||..-+
T Consensus 157 d~~Pf~alGSGs-laAmsvlEsr~k~dlt~eea~~Lv~eAi~AGi 200 (271)
T KOG0173|consen 157 DKLPFTALGSGS-LAAMSVLESRWKPDLTKEEAIKLVCEAIAAGI 200 (271)
T ss_pred Cccceeeeccch-HHHHHHHHHhcCcccCHHHHHHHHHHHHHhhh
Confidence 555655543222 24778899999999999999999999996533
No 163
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=35.89 E-value=18 Score=34.43 Aligned_cols=25 Identities=32% Similarity=0.570 Sum_probs=23.0
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++|||++.+|.+.-+|||..-
T Consensus 134 ~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 134 RDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCCCHHHEEEcCCCCEEEccccceE
Confidence 7889999999999999999999864
No 164
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=35.85 E-value=20 Score=35.18 Aligned_cols=25 Identities=40% Similarity=0.728 Sum_probs=22.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++||||+.+|.+.=+|||..-
T Consensus 120 ~dikp~NIll~~~~~~kl~Dfg~~~ 144 (323)
T cd05575 120 RDLKPENILLDSQGHVVLTDFGLCK 144 (323)
T ss_pred CCCCHHHeEECCCCcEEEeccCCCc
Confidence 7888999999999999999999764
No 165
>KOG0611|consensus
Probab=35.60 E-value=48 Score=34.66 Aligned_cols=87 Identities=25% Similarity=0.306 Sum_probs=53.5
Q ss_pred cccHHHHHHHHhCCCChHHHHHHHHHH--HHHhhHHHHHHHHhccCCCCCCceEEecCCcEEEEecccc--ccCCCCCCC
Q psy8358 183 QVSLLEYFIQEFGDINSEGFLAAQKNF--VQSTAAYSLVCYLLQVKDRHNGNILLSGEGHLIHIDFGFI--LSLSPRNLG 258 (424)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~r~~F--~~SlA~~sv~~yiLgigDRH~~NIli~~~G~~~HIDFg~~--fg~~~~~~~ 258 (424)
++.|++|+.+. +.- ++ -++|.-| +.|...||=-.-+. =.|--++|||+|.+|.+=--|||.- |..++-+-.
T Consensus 137 ~GeLYDYiSer-~~L-sE--rEaRhfFRQIvSAVhYCHknrVv-HRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqT 211 (668)
T KOG0611|consen 137 GGELYDYISER-GSL-SE--REARHFFRQIVSAVHYCHKNRVV-HRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQT 211 (668)
T ss_pred CccHHHHHHHh-ccc-cH--HHHHHHHHHHHHHHHHHhhccce-ecccchhheeecCCCCeeeeccchhhhhccccHHHH
Confidence 46788888664 222 22 3455444 34556665433332 2567789999999999999999864 333332223
Q ss_pred CCCCCccccHHHHHHh
Q psy8358 259 FETSPFKLTLEVVEVF 274 (424)
Q Consensus 259 ~E~vPFrLT~~~~~~m 274 (424)
|=-.|.--+|++++.-
T Consensus 212 FCGSPLYASPEIvNG~ 227 (668)
T KOG0611|consen 212 FCGSPLYASPEIVNGT 227 (668)
T ss_pred hcCCcccCCccccCCC
Confidence 4456777777777643
No 166
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=35.59 E-value=60 Score=30.62 Aligned_cols=27 Identities=41% Similarity=0.646 Sum_probs=23.7
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
||-.++|||++.+|.+.-+|||.....
T Consensus 148 ~dlkp~nili~~~~~~kl~dfg~~~~~ 174 (286)
T cd06638 148 RDVKGNNILLTTEGGVKLVDFGVSAQL 174 (286)
T ss_pred cCCCHHhEEECCCCCEEEccCCceeec
Confidence 788999999999999999999986543
No 167
>KOG0593|consensus
Probab=35.14 E-value=22 Score=35.63 Aligned_cols=28 Identities=39% Similarity=0.610 Sum_probs=24.1
Q ss_pred CCCCCCceEEecCCcEEEEeccccccCC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSLS 253 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~~ 253 (424)
.|=-++||||+.+|.+=-+||||+=--.
T Consensus 125 RDIKPENILit~~gvvKLCDFGFAR~L~ 152 (396)
T KOG0593|consen 125 RDIKPENILITQNGVVKLCDFGFARTLS 152 (396)
T ss_pred ccCChhheEEecCCcEEeccchhhHhhc
Confidence 5778999999999999999999975443
No 168
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=34.93 E-value=33 Score=32.16 Aligned_cols=25 Identities=24% Similarity=0.196 Sum_probs=21.3
Q ss_pred cCCCCCCceEEecCCcEEEEecccc
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
=||=|++|||++.++.+-=|||+..
T Consensus 167 HgD~~~~Nil~~~~~~~~iIDwe~a 191 (244)
T cd05150 167 HGDACLPNIIVDPGKFSGFIDLGRL 191 (244)
T ss_pred CCCCCCccEEEeCCcEEEEEEcccc
Confidence 3999999999998666668999866
No 169
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=34.88 E-value=3.6e+02 Score=24.76 Aligned_cols=26 Identities=27% Similarity=0.293 Sum_probs=23.2
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=+++|||++.+|.+.=+|||....
T Consensus 126 ~di~p~Nili~~~~~~~l~dfg~~~~ 151 (260)
T cd05070 126 RDLRSANILVGDGLVCKIADFGLARL 151 (260)
T ss_pred CCCccceEEEeCCceEEeCCceeeee
Confidence 78899999999999999999998753
No 170
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=34.62 E-value=22 Score=34.89 Aligned_cols=25 Identities=40% Similarity=0.728 Sum_probs=22.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=+++||||+.+|++.=+|||..-
T Consensus 120 ~Dlkp~NIll~~~~~~kL~DfG~~~ 144 (325)
T cd05604 120 RDLKPENILLDSQGHVVLTDFGLCK 144 (325)
T ss_pred cCCCHHHeEECCCCCEEEeecCCcc
Confidence 6888999999999999999999764
No 171
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=34.59 E-value=20 Score=35.08 Aligned_cols=25 Identities=36% Similarity=0.626 Sum_probs=22.7
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++|||++.+|++.-+|||..-
T Consensus 120 ~dlkp~Nill~~~~~~kL~Dfg~a~ 144 (316)
T cd05592 120 RDLKLDNVLLDKDGHIKIADFGMCK 144 (316)
T ss_pred CCCCHHHeEECCCCCEEEccCcCCe
Confidence 6888999999999999999999763
No 172
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=34.52 E-value=52 Score=32.33 Aligned_cols=25 Identities=36% Similarity=0.640 Sum_probs=22.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||=+++|||++.+|.+.=+|||..-
T Consensus 120 ~dlkp~Nili~~~~~~kL~Dfg~~~ 144 (329)
T cd05588 120 RDLKLDNVLLDAEGHIKLTDYGMCK 144 (329)
T ss_pred cCCCHHHeEECCCCCEEECcCcccc
Confidence 7889999999999999999999764
No 173
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=34.36 E-value=37 Score=33.40 Aligned_cols=28 Identities=21% Similarity=0.394 Sum_probs=24.5
Q ss_pred CCCCCCceEEecCCcEEEEeccccccCC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSLS 253 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~~ 253 (424)
+|=+++|||++.+|.+-=+|||......
T Consensus 142 rdikp~Nil~~~~~~~kl~Dfg~~~~~~ 169 (343)
T cd07878 142 RDLKPSNVAVNEDCELRILDFGLARQAD 169 (343)
T ss_pred ccCChhhEEECCCCCEEEcCCccceecC
Confidence 7889999999999999999999876543
No 174
>KOG0610|consensus
Probab=34.35 E-value=29 Score=36.03 Aligned_cols=31 Identities=32% Similarity=0.611 Sum_probs=26.7
Q ss_pred Hhcc--CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 222 LLQV--KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 222 iLgi--gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
.||| .|--++||||..+|||.-.||...+..
T Consensus 197 mlGivYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 197 MLGIVYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred hhceeeccCCcceeEEecCCcEEeeeccccccC
Confidence 4565 588999999999999999999887766
No 175
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=34.26 E-value=34 Score=34.23 Aligned_cols=35 Identities=29% Similarity=0.406 Sum_probs=29.5
Q ss_pred HHhccCCCCCCceEEec-CCcEEEEeccccccCCCC
Q psy8358 221 YLLQVKDRHNGNILLSG-EGHLIHIDFGFILSLSPR 255 (424)
Q Consensus 221 yiLgigDRH~~NIli~~-~G~~~HIDFg~~fg~~~~ 255 (424)
.++-=+|=|.+|||++. +|++.=|||.|.--+.|.
T Consensus 182 ~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~~ 217 (330)
T PLN02421 182 VVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRG 217 (330)
T ss_pred eEEEECCCCcccEEEeCCCCcEEEEcccccCCCccH
Confidence 45667899999999986 689999999998777664
No 176
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=34.25 E-value=26 Score=36.00 Aligned_cols=29 Identities=31% Similarity=0.296 Sum_probs=22.8
Q ss_pred hccCCCCCCceEEecCCcEEEEeccccccC
Q psy8358 223 LQVKDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 223 LgigDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
|=-||=|.+|||++.++ .+-||+-+.+-.
T Consensus 194 llHGDl~~gNi~~~~~~-~~~iD~e~~~~G 222 (370)
T TIGR01767 194 LLHGDLHSGSIFVSEHE-TKVIDPEFAFYG 222 (370)
T ss_pred eeeccCCcccEEEcCCC-CEEEcCcccccC
Confidence 34699999999998765 778999866544
No 177
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=34.21 E-value=33 Score=33.45 Aligned_cols=34 Identities=29% Similarity=0.446 Sum_probs=28.6
Q ss_pred HHhccCCCCCCceEEecCCcEEEEeccccccCCC
Q psy8358 221 YLLQVKDRHNGNILLSGEGHLIHIDFGFILSLSP 254 (424)
Q Consensus 221 yiLgigDRH~~NIli~~~G~~~HIDFg~~fg~~~ 254 (424)
.++-=+|=|++|++.+..|+++=|||-++--.+|
T Consensus 153 ~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~~D~ 186 (269)
T COG0510 153 LVPCHNDLNPGNLLLTDKGGLFLIDWEYAGLNDP 186 (269)
T ss_pred eeeecCCCCccceEEcCCCcEEEEecccCCCccH
Confidence 4555689999999999999999999988766654
No 178
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=34.09 E-value=65 Score=30.97 Aligned_cols=47 Identities=32% Similarity=0.563 Sum_probs=33.0
Q ss_pred CCCCCCceEEecCCcEEEEeccccccCCCCCCC---CCCCCccccHHHHH
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSLSPRNLG---FETSPFKLTLEVVE 272 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~~~~~~~---~E~vPFrLT~~~~~ 272 (424)
||=+++|||++.+|.+.=+|||......+.... ....|+-+.|++..
T Consensus 139 ~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 188 (297)
T cd06656 139 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT 188 (297)
T ss_pred CCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHc
Confidence 899999999999999999999987654332111 12344556677654
No 179
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=33.99 E-value=23 Score=34.67 Aligned_cols=25 Identities=44% Similarity=0.618 Sum_probs=22.5
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++|||++.+|++.-+|||..-
T Consensus 120 rDikp~Nill~~~~~~kL~Dfg~~~ 144 (321)
T cd05591 120 RDLKLDNILLDAEGHCKLADFGMCK 144 (321)
T ss_pred cCCCHHHeEECCCCCEEEeecccce
Confidence 6888899999999999999999764
No 180
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=33.84 E-value=36 Score=31.84 Aligned_cols=24 Identities=42% Similarity=0.592 Sum_probs=20.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||=...||++..++ ++-||||.-.
T Consensus 116 GDLTtsNiIl~~~~-i~~IDfGLg~ 139 (204)
T COG3642 116 GDLTTSNIILSGGR-IYFIDFGLGE 139 (204)
T ss_pred CCCccceEEEeCCc-EEEEECCccc
Confidence 89999999998765 9999999765
No 181
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=33.76 E-value=80 Score=29.13 Aligned_cols=27 Identities=22% Similarity=0.262 Sum_probs=23.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
||=+++||+++.+|++.-+|||..-..
T Consensus 124 ~dl~p~ni~i~~~~~~~l~d~g~~~~~ 150 (256)
T cd05112 124 RDLAARNCLVGENQVVKVSDFGMTRFV 150 (256)
T ss_pred cccccceEEEcCCCeEEECCCcceeec
Confidence 799999999999999999999976433
No 182
>KOG0690|consensus
Probab=33.67 E-value=21 Score=36.17 Aligned_cols=50 Identities=28% Similarity=0.428 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhc----cCCCCCCceEEecCCcEEEEeccccccC
Q psy8358 202 FLAAQKNFVQSTAAYSLVCYLLQ----VKDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 202 ~~~~r~~F~~SlA~~sv~~yiLg----igDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
|-+.|.+|--+ -..|.++|+-. -.|-.++|+|+|++||+=-.|||.+=+.
T Consensus 265 FsE~RtRFYGa-EIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~ 318 (516)
T KOG0690|consen 265 FSEDRTRFYGA-EIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE 318 (516)
T ss_pred ccchhhhhhhH-HHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhc
Confidence 34556666433 33455666643 3577889999999999999999987443
No 183
>KOG0594|consensus
Probab=33.45 E-value=28 Score=35.01 Aligned_cols=48 Identities=25% Similarity=0.301 Sum_probs=32.3
Q ss_pred HHHHHHHhhHHHHHHHHhcc--CCCCCCceEEecCCcEEEEeccccccCC
Q psy8358 206 QKNFVQSTAAYSLVCYLLQV--KDRHNGNILLSGEGHLIHIDFGFILSLS 253 (424)
Q Consensus 206 r~~F~~SlA~~sv~~yiLgi--gDRH~~NIli~~~G~~~HIDFg~~fg~~ 253 (424)
.+.|++.+-----.++==|| .|=+++||||+++|.+==+|||..-..+
T Consensus 122 ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ 171 (323)
T KOG0594|consen 122 IKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFS 171 (323)
T ss_pred HHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhc
Confidence 34555544322222333333 6889999999999999999999876444
No 184
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=33.14 E-value=25 Score=34.52 Aligned_cols=25 Identities=32% Similarity=0.602 Sum_probs=22.7
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++||||+.+|.+.=+|||..-
T Consensus 119 rDlkp~NIll~~~~~~kl~DfG~a~ 143 (323)
T cd05571 119 RDLKLENLMLDKDGHIKITDFGLCK 143 (323)
T ss_pred CCCCHHHEEECCCCCEEEeeCCCCc
Confidence 7889999999999999999999753
No 185
>PHA03212 serine/threonine kinase US3; Provisional
Probab=33.09 E-value=77 Score=32.31 Aligned_cols=24 Identities=29% Similarity=0.454 Sum_probs=22.3
Q ss_pred CCCCCCceEEecCCcEEEEecccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
+|=.++||||+.+|.+.=+|||..
T Consensus 206 rDiKP~NIll~~~~~vkL~DFG~a 229 (391)
T PHA03212 206 RDIKAENIFINHPGDVCLGDFGAA 229 (391)
T ss_pred CCCChHhEEEcCCCCEEEEeCCcc
Confidence 788899999999999999999976
No 186
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=32.89 E-value=68 Score=29.83 Aligned_cols=26 Identities=27% Similarity=0.312 Sum_probs=23.1
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||=+++|||++.+|.+--+|||..-.
T Consensus 119 ~dlkp~nill~~~~~~kl~Dfg~~~~ 144 (257)
T cd05116 119 RDLAARNVLLVTQHYAKISDFGLSKA 144 (257)
T ss_pred cccchhhEEEcCCCeEEECCCccccc
Confidence 89999999999999999999997643
No 187
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=32.78 E-value=21 Score=35.44 Aligned_cols=25 Identities=24% Similarity=0.414 Sum_probs=22.7
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||=+++||||+.+|.+.-+|||..-
T Consensus 192 rDlkp~NIll~~~~~~kL~DfG~~~ 216 (353)
T PLN00034 192 RDIKPSNLLINSAKNVKIADFGVSR 216 (353)
T ss_pred cCCCHHHEEEcCCCCEEEcccccce
Confidence 7889999999999999999999754
No 188
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=32.78 E-value=21 Score=34.19 Aligned_cols=26 Identities=31% Similarity=0.554 Sum_probs=23.5
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=.++|||++.+|++.=+|||..-.
T Consensus 127 ~dlkp~Nil~~~~~~~kl~DfG~~~~ 152 (288)
T cd07871 127 RDLKPQNLLINEKGELKLADFGLARA 152 (288)
T ss_pred CCCCHHHEEECCCCCEEECcCcceee
Confidence 79999999999999999999998643
No 189
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=32.66 E-value=23 Score=34.83 Aligned_cols=27 Identities=33% Similarity=0.663 Sum_probs=23.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
||=.++||||+.+|++.=+|||..-..
T Consensus 125 ~Dlkp~NIll~~~~~~kL~Dfg~~~~~ 151 (350)
T cd05573 125 RDIKPDNILIDADGHIKLADFGLCKKM 151 (350)
T ss_pred cCCCHHHeEECCCCCEEeecCCCCccC
Confidence 688899999999999999999987543
No 190
>KOG2381|consensus
Probab=32.60 E-value=1.4e+02 Score=29.63 Aligned_cols=83 Identities=17% Similarity=0.164 Sum_probs=49.7
Q ss_pred HHHHHHHHhccCCCCCCceEEec---CCcEEEE-eccccccCCCCCCCC-------CCCCccccHHHHHHhC-CCcchhh
Q psy8358 215 AYSLVCYLLQVKDRHNGNILLSG---EGHLIHI-DFGFILSLSPRNLGF-------ETSPFKLTLEVVEVFG-GVDMFCY 282 (424)
Q Consensus 215 ~~sv~~yiLgigDRH~~NIli~~---~G~~~HI-DFg~~fg~~~~~~~~-------E~vPFrLT~~~~~~mg-~~~~~~~ 282 (424)
-.+|+-|+++=-|||++|+|+.. .+...+. |=|.+|-..-....+ -.+| ++.+.++-+- +...-..
T Consensus 149 kivvlD~ri~NtDRh~~N~lvk~~~~~~~~~~~~Dhgl~fP~~~~d~~f~W~~~pqa~~p--fs~~~~~yiL~~~~d~~~ 226 (286)
T KOG2381|consen 149 KIVVLDIRIRNTDRHAGNWLVKKEPTLEQAAILGDHGLCFPEKHPDEWFEWLYWPQAKIP--FSEEIVDYILDPLTDCNL 226 (286)
T ss_pred eeEEEEEEeeccCCCCCceeEEeccCcccccccccCceeCcccCCccccchHHHHhhccc--ccHHHHhccCCcccCHHH
Confidence 46778888999999999999985 3444443 677777654322222 2466 4555555552 2223333
Q ss_pred HHHHHHHHHHHHhcChh
Q psy8358 283 FKILMLQGLIAARKHMD 299 (424)
Q Consensus 283 f~~~~~~~~~~LR~~~~ 299 (424)
.+.+|...+..++.-..
T Consensus 227 ~r~l~~~~~~~~~~~~~ 243 (286)
T KOG2381|consen 227 LRELPEDLLRLFKVDTG 243 (286)
T ss_pred HHHhHHHHHHHHhhchh
Confidence 44566666666665544
No 191
>PHA02882 putative serine/threonine kinase; Provisional
Probab=32.32 E-value=30 Score=33.37 Aligned_cols=24 Identities=29% Similarity=0.484 Sum_probs=21.7
Q ss_pred CCCCCCceEEecCCcEEEEecccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
+|=.++|||++.+|++.=+|||..
T Consensus 150 rDiKp~Nill~~~~~~~l~DFGla 173 (294)
T PHA02882 150 GDIKPENIMVDGNNRGYIIDYGIA 173 (294)
T ss_pred CCCCHHHEEEcCCCcEEEEEcCCc
Confidence 677889999999999999999985
No 192
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=32.20 E-value=27 Score=32.27 Aligned_cols=25 Identities=28% Similarity=0.326 Sum_probs=23.0
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||-+++|||++.+|.+.=+|||..-
T Consensus 117 ~dl~p~nili~~~~~~~l~d~g~~~ 141 (250)
T cd05085 117 RDLAARNCLVGENNVLKISDFGMSR 141 (250)
T ss_pred cccChheEEEcCCCeEEECCCccce
Confidence 8999999999999999999999764
No 193
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=32.18 E-value=24 Score=32.92 Aligned_cols=26 Identities=31% Similarity=0.507 Sum_probs=23.7
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||-+++||+++.+|++.-+|||....
T Consensus 137 ~~l~p~ni~~~~~~~~~l~d~~~~~~ 162 (275)
T cd06608 137 RDIKGQNILLTKNAEVKLVDFGVSAQ 162 (275)
T ss_pred CCCCHHHEEEccCCeEEECCCcccee
Confidence 89999999999999999999998643
No 194
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=31.93 E-value=29 Score=33.61 Aligned_cols=29 Identities=31% Similarity=0.469 Sum_probs=25.5
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccCC
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSLS 253 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~~ 253 (424)
-||=+++||||+.+|.+.=+|||......
T Consensus 126 H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 154 (316)
T cd05574 126 YRDLKPENILLHESGHIMLSDFDLSKQSD 154 (316)
T ss_pred ccCCChHHeEEcCCCCEEEeecchhhccc
Confidence 48999999999999999999999876543
No 195
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=31.60 E-value=1.2e+02 Score=28.59 Aligned_cols=25 Identities=32% Similarity=0.445 Sum_probs=22.6
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||=.++||||+.+|++.=+|||..-
T Consensus 132 ~dlkp~nili~~~~~~~l~dfg~~~ 156 (284)
T cd05081 132 RDLATRNILVESENRVKIGDFGLTK 156 (284)
T ss_pred ccCCHhhEEECCCCeEEECCCcccc
Confidence 7889999999999999999999754
No 196
>KOG2345|consensus
Probab=31.60 E-value=38 Score=33.09 Aligned_cols=27 Identities=33% Similarity=0.448 Sum_probs=23.9
Q ss_pred cCCCCCCceEEecCCcEEEEecccccc
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
=+|=-++|||++.+|..+-+|||.+=.
T Consensus 152 H~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 152 HRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred ccCCCcceeEecCCCceEEEeccCccc
Confidence 368899999999999999999998743
No 197
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=31.57 E-value=1.1e+02 Score=28.68 Aligned_cols=27 Identities=26% Similarity=0.477 Sum_probs=23.5
Q ss_pred cCCCCCCceEEecCCcEEEEecccccc
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
-||=+++||+++.+|.+.=+|||....
T Consensus 118 H~di~p~Nil~~~~~~~~l~dfg~~~~ 144 (277)
T cd05577 118 YRDLKPENVLLDDHGNVRISDLGLAVE 144 (277)
T ss_pred cCCCCHHHEEECCCCCEEEccCcchhh
Confidence 378889999999999999999997654
No 198
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=31.52 E-value=1.1e+02 Score=28.18 Aligned_cols=29 Identities=41% Similarity=0.565 Sum_probs=25.2
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccCC
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSLS 253 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~~ 253 (424)
-||=+++||+++.+|.+.=+|||......
T Consensus 122 H~dl~~~ni~~~~~~~~~l~dfg~~~~~~ 150 (256)
T cd06612 122 HRDIKAGNILLNEEGQAKLADFGVSGQLT 150 (256)
T ss_pred cCCCCcceEEECCCCcEEEcccccchhcc
Confidence 48999999999999999999999876543
No 199
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=31.40 E-value=26 Score=35.01 Aligned_cols=25 Identities=36% Similarity=0.640 Sum_probs=22.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++||||+.+|++.=+|||..-
T Consensus 125 rDlKp~NILi~~~~~vkL~DFGla~ 149 (363)
T cd05628 125 RDIKPDNLLLDSKGHVKLSDFGLCT 149 (363)
T ss_pred cCCCHHHeEECCCCCEEEeeccCcc
Confidence 7889999999999999999999753
No 200
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=31.36 E-value=34 Score=32.28 Aligned_cols=25 Identities=36% Similarity=0.547 Sum_probs=22.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||-+++||+++.+|.+.-+|||..-
T Consensus 125 ~dl~p~ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06642 125 RDIKAANVLLSEQGDVKLADFGVAG 149 (277)
T ss_pred cCCChheEEEeCCCCEEEccccccc
Confidence 7999999999999999999999763
No 201
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=31.36 E-value=1.4e+02 Score=27.69 Aligned_cols=25 Identities=28% Similarity=0.420 Sum_probs=22.7
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=+++||+++.+|.+.=+|||..-
T Consensus 124 ~dl~p~nili~~~~~~kl~d~g~~~ 148 (256)
T cd05113 124 RDLAARNCLVDDQGCVKVSDFGLSR 148 (256)
T ss_pred cccCcceEEEcCCCCEEECCCccce
Confidence 8999999999999999999999753
No 202
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=31.13 E-value=78 Score=30.37 Aligned_cols=25 Identities=24% Similarity=0.292 Sum_probs=23.0
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++||+|+.+|.+.=+|||..-
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~ 186 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSR 186 (304)
T ss_pred cCcchhheEEcCCccEEECCCccce
Confidence 7999999999999999999999764
No 203
>PHA03209 serine/threonine kinase US3; Provisional
Probab=31.09 E-value=1.1e+02 Score=30.37 Aligned_cols=25 Identities=20% Similarity=0.286 Sum_probs=22.6
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++|||++.+|.+.=+|||..-
T Consensus 181 rDlkp~Nill~~~~~~kl~DfG~a~ 205 (357)
T PHA03209 181 RDVKTENIFINDVDQVCIGDLGAAQ 205 (357)
T ss_pred CCCCHHHEEECCCCCEEEecCcccc
Confidence 7888999999999999999999763
No 204
>PHA03211 serine/threonine kinase US3; Provisional
Probab=30.92 E-value=1e+02 Score=32.48 Aligned_cols=24 Identities=29% Similarity=0.488 Sum_probs=22.2
Q ss_pred CCCCCCceEEecCCcEEEEecccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
+|=+++||||+.+|.+.=+|||..
T Consensus 284 rDLKP~NILl~~~~~vkL~DFGla 307 (461)
T PHA03211 284 RDIKTENVLVNGPEDICLGDFGAA 307 (461)
T ss_pred CcCCHHHEEECCCCCEEEcccCCc
Confidence 788999999999999999999975
No 205
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=30.88 E-value=5.1e+02 Score=25.18 Aligned_cols=26 Identities=31% Similarity=0.607 Sum_probs=23.3
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=.++|||++.+|++.-+|||....
T Consensus 120 rDlkp~Nili~~~~~~kl~Dfg~~~~ 145 (327)
T cd05617 120 RDLKLDNVLLDADGHIKLTDYGMCKE 145 (327)
T ss_pred cCCCHHHEEEeCCCCEEEecccccee
Confidence 78889999999999999999997653
No 206
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=30.86 E-value=25 Score=34.06 Aligned_cols=25 Identities=32% Similarity=0.551 Sum_probs=22.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||=+++|||++.+|.+.=+|||..-
T Consensus 128 ~dlkp~Nill~~~~~~kl~Dfg~~~ 152 (309)
T cd07872 128 RDLKPQNLLINERGELKLADFGLAR 152 (309)
T ss_pred CCCCHHHEEECCCCCEEECccccce
Confidence 7889999999999999999999864
No 207
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=30.68 E-value=26 Score=34.34 Aligned_cols=26 Identities=35% Similarity=0.620 Sum_probs=23.0
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=.++|||++.+|++.-+|||..-.
T Consensus 125 rDikp~Nill~~~~~ikL~Dfg~~~~ 150 (323)
T cd05615 125 RDLKLDNVMLDSEGHIKIADFGMCKE 150 (323)
T ss_pred cCCCHHHeEECCCCCEEEeccccccc
Confidence 68889999999999999999997643
No 208
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=30.65 E-value=84 Score=28.77 Aligned_cols=30 Identities=23% Similarity=0.197 Sum_probs=25.9
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccCCC
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSLSP 254 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~~~ 254 (424)
-||=.++||+++.+|.+.=+|||.......
T Consensus 126 h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 126 HRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred ecccccceEEEccCCeEEEcccCCceeccc
Confidence 379999999999999999999998865544
No 209
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=30.60 E-value=97 Score=30.63 Aligned_cols=25 Identities=36% Similarity=0.445 Sum_probs=22.7
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|-.++|||++.+|.+.=+|||..-
T Consensus 197 rDikp~Nill~~~~~vkL~DfG~a~ 221 (337)
T cd05054 197 RDLAARNILLSENNVVKICDFGLAR 221 (337)
T ss_pred CCCCcceEEEeCCCcEEEeccccch
Confidence 7999999999999999999999763
No 210
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=30.50 E-value=2.8e+02 Score=26.53 Aligned_cols=45 Identities=36% Similarity=0.505 Sum_probs=30.5
Q ss_pred CCCCCCceEEecCCcEEEEeccccccCCCCCCCCCCCCccccHHHH
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSLSPRNLGFETSPFKLTLEVV 271 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~~~~~~~~E~vPFrLT~~~~ 271 (424)
||-+++||+++.+|.+.=+|||......+.... -..|.-+.|+++
T Consensus 139 ~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~-~~~~~y~aPE~~ 183 (307)
T cd06607 139 RDIKAGNILLTEPGTVKLADFGSASLVSPANSF-VGTPYWMAPEVI 183 (307)
T ss_pred cCCCcccEEECCCCCEEEeecCcceecCCCCCc-cCCccccCceee
Confidence 899999999999999999999976544332111 122334556654
No 211
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=30.50 E-value=4.9e+02 Score=24.92 Aligned_cols=27 Identities=22% Similarity=0.431 Sum_probs=23.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
+|=.++|||++.+|++.=+|||..-..
T Consensus 158 ~dlkp~Nill~~~~~~kL~Dfg~~~~~ 184 (314)
T cd05099 158 RDLAARNVLVTEDNVMKIADFGLARGV 184 (314)
T ss_pred ccccceeEEEcCCCcEEEccccccccc
Confidence 788899999999999999999987543
No 212
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=30.43 E-value=2.3e+02 Score=25.94 Aligned_cols=28 Identities=21% Similarity=0.258 Sum_probs=23.0
Q ss_pred CCCCCCceEEecCC-------cEEEEeccccccCC
Q psy8358 226 KDRHNGNILLSGEG-------HLIHIDFGFILSLS 253 (424)
Q Consensus 226 gDRH~~NIli~~~G-------~~~HIDFg~~fg~~ 253 (424)
+|=.++|||++.+| .+-=+|||+.....
T Consensus 125 ~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~ 159 (259)
T cd05037 125 GNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVL 159 (259)
T ss_pred ccCccceEEEecCccccCCceeEEeCCCCcccccc
Confidence 78889999999877 67888999776543
No 213
>PHA03210 serine/threonine kinase US3; Provisional
Probab=30.38 E-value=93 Score=32.96 Aligned_cols=25 Identities=32% Similarity=0.561 Sum_probs=22.6
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++||||+.+|.+.=+|||..-
T Consensus 291 rDLKP~NILl~~~~~vkL~DFGla~ 315 (501)
T PHA03210 291 RDIKLENIFLNCDGKIVLGDFGTAM 315 (501)
T ss_pred CCCCHHHEEECCCCCEEEEeCCCce
Confidence 5888999999999999999999873
No 214
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=30.34 E-value=55 Score=30.39 Aligned_cols=26 Identities=27% Similarity=0.373 Sum_probs=22.8
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||=.++||+++.+|.+.=+|||+.-.
T Consensus 126 ~dlkp~nil~~~~~~~kl~dfg~~~~ 151 (256)
T cd05082 126 RDLAARNVLVSEDNVAKVSDFGLTKE 151 (256)
T ss_pred cccchheEEEcCCCcEEecCCcccee
Confidence 67779999999999999999997654
No 215
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=30.26 E-value=33 Score=31.91 Aligned_cols=28 Identities=25% Similarity=0.242 Sum_probs=24.5
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccC
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
-||-+++||||+.+|.+.=+|||.....
T Consensus 126 h~di~p~nili~~~~~~~l~d~g~~~~~ 153 (261)
T cd05034 126 HRDLAARNILVGENLVCKIADFGLARLI 153 (261)
T ss_pred cCCcchheEEEcCCCCEEECccccceec
Confidence 4899999999999999999999986543
No 216
>PF02471 OspE: Borrelia outer surface protein E; InterPro: IPR003483 This is a family of outer surface proteins (Osp) from the Borrelia spp. spirochete []. The family includes OspE, OspF, and OspEF-related proteins (Erp) []. These proteins are coded for on different circular plasmids in the Borrelia genome.
Probab=30.10 E-value=41 Score=27.52 Aligned_cols=34 Identities=29% Similarity=0.561 Sum_probs=26.4
Q ss_pred CCHHHHHHHHHHHhhcccccccccccccccc---ccccC
Q psy8358 388 LTEEQLQVLIDKLVDTSIHSLSTKLYDGFQY---YTNGI 423 (424)
Q Consensus 388 lse~qv~~~i~~~id~s~~~~~tk~Yd~~q~---~tngi 423 (424)
+-|.+|..||..|+.. .++-|.+|-||+. ..|||
T Consensus 49 leesEvNNFvkaMteg--GsFktslYYGyk~eqs~~ngi 85 (108)
T PF02471_consen 49 LEESEVNNFVKAMTEG--GSFKTSLYYGYKEEQSNENGI 85 (108)
T ss_pred ecHHHHHHHHHHHhcC--Cceeeeeeeeccccccccccc
Confidence 4599999999999975 3456899998854 45776
No 217
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=29.99 E-value=29 Score=34.99 Aligned_cols=50 Identities=28% Similarity=0.440 Sum_probs=33.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccccCCCCCC----CCCCCCccccHHHHHHhC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSLSPRNL----GFETSPFKLTLEVVEVFG 275 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~~~~~~----~~E~vPFrLT~~~~~~mg 275 (424)
+|=.++||||+.+|++.=+|||.......... ...-.|.=+.||++...+
T Consensus 166 rDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 219 (370)
T cd05621 166 RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQG 219 (370)
T ss_pred cCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccC
Confidence 68889999999999999999998765432111 111234446677776543
No 218
>PRK09188 serine/threonine protein kinase; Provisional
Probab=29.97 E-value=41 Score=34.43 Aligned_cols=28 Identities=25% Similarity=0.358 Sum_probs=23.6
Q ss_pred hcc--CCC-CCCceEEecCCcEEEEeccccc
Q psy8358 223 LQV--KDR-HNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 223 Lgi--gDR-H~~NIli~~~G~~~HIDFg~~f 250 (424)
.|| +|= -++|||++.+|++.=||||..-
T Consensus 130 ~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~ 160 (365)
T PRK09188 130 AGITHNDLAKPQNWLMGPDGEAAVIDFQLAS 160 (365)
T ss_pred CCCeeCCCCCcceEEEcCCCCEEEEECccce
Confidence 455 788 4999999999999999999755
No 219
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=29.82 E-value=40 Score=31.07 Aligned_cols=27 Identities=22% Similarity=0.245 Sum_probs=23.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
||-+++||+++.+|++.=+|||....-
T Consensus 125 ~dl~~~nili~~~~~~~l~df~~~~~~ 151 (256)
T cd08529 125 RDIKSLNLFLDAYDNVKIGDLGVAKLL 151 (256)
T ss_pred CCCCcceEEEeCCCCEEEcccccceec
Confidence 799999999999999999999976543
No 220
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=29.69 E-value=26 Score=33.75 Aligned_cols=26 Identities=31% Similarity=0.544 Sum_probs=23.6
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||=+++|||++.+|.+.=+|||....
T Consensus 128 ~dlkp~Nil~~~~~~~kl~dfg~~~~ 153 (301)
T cd07873 128 RDLKPQNLLINERGELKLADFGLARA 153 (301)
T ss_pred CCCCHHHEEECCCCcEEECcCcchhc
Confidence 79999999999999999999998754
No 221
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=29.42 E-value=28 Score=34.12 Aligned_cols=25 Identities=40% Similarity=0.651 Sum_probs=22.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++||||+.+|++.=+|||..-
T Consensus 120 rDlkp~Nili~~~~~~kl~Dfg~a~ 144 (330)
T cd05586 120 RDLKPENILLDATGHIALCDFGLSK 144 (330)
T ss_pred ccCCHHHeEECCCCCEEEecCCcCc
Confidence 7889999999999999999999753
No 222
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=29.39 E-value=40 Score=33.08 Aligned_cols=25 Identities=36% Similarity=0.445 Sum_probs=22.5
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++|||++.+|.+.-+|||..-
T Consensus 198 rDiKp~Nil~~~~~~~kl~DfG~a~ 222 (338)
T cd05102 198 RDLAARNILLSENNVVKICDFGLAR 222 (338)
T ss_pred CCCccceEEEcCCCcEEEeeccccc
Confidence 6888999999999999999999764
No 223
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=29.36 E-value=28 Score=34.26 Aligned_cols=25 Identities=32% Similarity=0.602 Sum_probs=22.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++||||+.+|++.=+|||..-
T Consensus 119 rDikp~NIll~~~~~~kL~DfG~~~ 143 (328)
T cd05593 119 RDLKLENLMLDKDGHIKITDFGLCK 143 (328)
T ss_pred cccCHHHeEECCCCcEEEecCcCCc
Confidence 7999999999999999999999753
No 224
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=29.20 E-value=56 Score=31.74 Aligned_cols=48 Identities=35% Similarity=0.488 Sum_probs=32.3
Q ss_pred CCCCCCceEEecCCcEEEEeccccccCCCCCCCCCCCCccccHHHHHHh
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSLSPRNLGFETSPFKLTLEVVEVF 274 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~~~~~~~~E~vPFrLT~~~~~~m 274 (424)
||=+++||+++.+|.+.=+|||......+....... +.-+.|++...+
T Consensus 145 ~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~-~~y~aPE~~~~~ 192 (313)
T cd06633 145 RDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGT-PYWMAPEVILAM 192 (313)
T ss_pred CCCChhhEEECCCCCEEEeecCCCcccCCCCCcccc-ccccChhhcccc
Confidence 788999999999999999999987654332211122 223566765443
No 225
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=29.15 E-value=36 Score=31.63 Aligned_cols=24 Identities=33% Similarity=0.450 Sum_probs=22.6
Q ss_pred CCCCCCceEEecCCcEEEEecccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
||=+++||+++.+|++.=+|||..
T Consensus 128 ~dl~p~nilv~~~~~~~l~dfg~~ 151 (263)
T cd06625 128 RDIKGANILRDSAGNVKLGDFGAS 151 (263)
T ss_pred CCCCHHHEEEcCCCCEEEeecccc
Confidence 899999999999999999999975
No 226
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=29.14 E-value=31 Score=32.44 Aligned_cols=30 Identities=33% Similarity=0.501 Sum_probs=25.7
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccCCC
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSLSP 254 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~~~ 254 (424)
=||-+++||+++.+|.+.=+|||+.....+
T Consensus 121 H~dl~p~nili~~~~~~~l~df~~~~~~~~ 150 (283)
T cd05118 121 HRDLKPENLLINTEGVLKLADFGLARSFGS 150 (283)
T ss_pred ecCcCHHHEEECCCCcEEEeeeeeeEecCC
Confidence 389999999999999999999998755544
No 227
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=29.13 E-value=1.3e+02 Score=28.50 Aligned_cols=25 Identities=28% Similarity=0.389 Sum_probs=22.2
Q ss_pred CCCCCCceEEec-CCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSG-EGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~-~G~~~HIDFg~~f 250 (424)
+|-+++|||++. +|.+-=+|||..-
T Consensus 134 ~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 134 RDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred cCCChHHEEEecCCCeEEEeecccce
Confidence 899999999998 8999999999653
No 228
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=28.95 E-value=50 Score=30.25 Aligned_cols=31 Identities=26% Similarity=0.318 Sum_probs=23.9
Q ss_pred HhccCCCCCCceEEecC--C---cEEEEeccccccC
Q psy8358 222 LLQVKDRHNGNILLSGE--G---HLIHIDFGFILSL 252 (424)
Q Consensus 222 iLgigDRH~~NIli~~~--G---~~~HIDFg~~fg~ 252 (424)
+|-=||=|.+|||++.+ | .+.-|||..+--.
T Consensus 121 vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g 156 (196)
T smart00587 121 VLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYG 156 (196)
T ss_pred EEeeCCCCccceeeccCCCCCccceEEEecccCCcC
Confidence 34449999999999863 4 6999999776444
No 229
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=28.86 E-value=1e+02 Score=28.69 Aligned_cols=27 Identities=26% Similarity=0.258 Sum_probs=23.7
Q ss_pred cCCCCCCceEEecCCcEEEEecccccc
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
=+|-+++||+++.+|.+.=+|||....
T Consensus 130 H~dlkp~Nili~~~~~~kl~dfg~~~~ 156 (268)
T cd05063 130 HRDLAARNILVNSNLECKVSDFGLSRV 156 (268)
T ss_pred ccccchhhEEEcCCCcEEECCCcccee
Confidence 489999999999999999999997643
No 230
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=28.86 E-value=31 Score=32.32 Aligned_cols=26 Identities=23% Similarity=0.331 Sum_probs=23.0
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=.++|||++.+|++.-+|||..-.
T Consensus 136 ~dlkp~Nil~~~~~~~kl~Dfg~~~~ 161 (272)
T cd05075 136 RDLAARNCMLNENMNVCVADFGLSKK 161 (272)
T ss_pred cccchhheEEcCCCCEEECCCCcccc
Confidence 78889999999999999999997643
No 231
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=28.84 E-value=3.4e+02 Score=26.70 Aligned_cols=46 Identities=17% Similarity=0.332 Sum_probs=30.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccccCCCCCCCCCCCCccccHHHH
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSLSPRNLGFETSPFKLTLEVV 271 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~~~~~~~~E~vPFrLT~~~~ 271 (424)
+|=+++||+++.+|.+.=+|||............-..+.-..|+..
T Consensus 144 ~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~ 189 (345)
T cd07877 144 RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 189 (345)
T ss_pred cCCChHHEEEcCCCCEEEecccccccccccccccccCCCccCHHHH
Confidence 7888999999999999999999876543322111122333456654
No 232
>KOG0599|consensus
Probab=28.79 E-value=34 Score=33.96 Aligned_cols=46 Identities=30% Similarity=0.410 Sum_probs=31.5
Q ss_pred CCCCCCceEEecCCcEEEEeccccccCCCCCC--CCCCCCccccHHHH
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSLSPRNL--GFETSPFKLTLEVV 271 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~~~~~~--~~E~vPFrLT~~~~ 271 (424)
.|--++|||+|.+-++.-.||||.=.-.|+.- ..=-.|==|.|+.+
T Consensus 147 RDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEti 194 (411)
T KOG0599|consen 147 RDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETI 194 (411)
T ss_pred cccChhheeeccccceEEeccceeeccCCchhHHHhcCCCcccChhhe
Confidence 57789999999999999999999865544321 11124445555544
No 233
>KOG1006|consensus
Probab=28.73 E-value=38 Score=33.49 Aligned_cols=24 Identities=38% Similarity=0.599 Sum_probs=21.7
Q ss_pred CCCCCCceEEecCCcEEEEecccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
.|=-++|||+|+.|.+=-+|||.+
T Consensus 192 RDvKPSNILldr~G~vKLCDFGIc 215 (361)
T KOG1006|consen 192 RDVKPSNILLDRHGDVKLCDFGIC 215 (361)
T ss_pred ccCChhheEEecCCCEeeecccch
Confidence 577899999999999999999865
No 234
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=28.34 E-value=32 Score=33.67 Aligned_cols=24 Identities=42% Similarity=0.717 Sum_probs=22.4
Q ss_pred CCCCCCceEEecCCcEEEEecccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
+|=.++||||+.+|.+.=+|||..
T Consensus 124 ~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (323)
T cd05584 124 RDLKPENILLDAQGHVKLTDFGLC 147 (323)
T ss_pred CCCCHHHeEECCCCCEEEeeCcCC
Confidence 789999999999999999999975
No 235
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=28.29 E-value=33 Score=34.48 Aligned_cols=25 Identities=36% Similarity=0.671 Sum_probs=22.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++||||+.+|++.=+|||..-
T Consensus 125 rDlKp~NILl~~~g~~kL~DFGla~ 149 (382)
T cd05625 125 RDIKPDNILIDRDGHIKLTDFGLCT 149 (382)
T ss_pred CCCCHHHEEECCCCCEEEeECCCCc
Confidence 7889999999999999999999753
No 236
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=28.29 E-value=28 Score=34.02 Aligned_cols=25 Identities=32% Similarity=0.611 Sum_probs=22.7
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++|||++.+|.+.=+|||..-
T Consensus 120 rDlkp~Nil~~~~~~~kl~Dfg~~~ 144 (316)
T cd05620 120 RDLKLDNVMLDRDGHIKIADFGMCK 144 (316)
T ss_pred cCCCHHHeEECCCCCEEeCccCCCe
Confidence 7889999999999999999999754
No 237
>KOG0577|consensus
Probab=27.80 E-value=2.4e+02 Score=31.17 Aligned_cols=117 Identities=24% Similarity=0.379 Sum_probs=71.6
Q ss_pred HHHHHHHHhccC----CCCCCceEEecCCcEEEEeccccccCCCCCCCCCCCCccccHHHHHHhCCC------cchhhHH
Q psy8358 215 AYSLVCYLLQVK----DRHNGNILLSGEGHLIHIDFGFILSLSPRNLGFETSPFKLTLEVVEVFGGV------DMFCYFK 284 (424)
Q Consensus 215 ~~sv~~yiLgig----DRH~~NIli~~~G~~~HIDFg~~fg~~~~~~~~E~vPFrLT~~~~~~mg~~------~~~~~f~ 284 (424)
+..-+.|+=..+ |=-.||||++..|-|=--|||..-=..|.+- |--.||=..|+.+-+|... ++|. .-
T Consensus 135 aL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAns-FvGTPywMAPEVILAMDEGqYdgkvDvWS-LG 212 (948)
T KOG0577|consen 135 ALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANS-FVGTPYWMAPEVILAMDEGQYDGKVDVWS-LG 212 (948)
T ss_pred HHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCchhc-ccCCccccchhHheeccccccCCccceee-cc
Confidence 333444544443 5567899999999999999998877777322 2257999999999999532 3442 12
Q ss_pred HHHHHHHHHHhcChhHHHHHHHHHhcCCCCcccccc-hhhHHhhhhhcccCccHHHHHHHHHHHHHHhh
Q psy8358 285 ILMLQGLIAARKHMDKILSLVEIMRSGSQLPCFKSG-AATVQNLKNRFHMNLTEEQLQVLIDKLVDSSI 352 (424)
Q Consensus 285 ~~~~~~~~~LR~~~~~i~~ll~~~~~~~~lp~~~~~-~~~i~~l~~r~~l~~s~~eA~~~~~~lI~~S~ 352 (424)
.+|+. +--+.| |.|..+ ..++-.+++.=.+.+...+=..+|.+.|+.++
T Consensus 213 ITCIE-----------------LAERkP--PlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CL 262 (948)
T KOG0577|consen 213 ITCIE-----------------LAERKP--PLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCL 262 (948)
T ss_pred chhhh-----------------hhhcCC--CccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHH
Confidence 23332 211222 555522 23445555555555655666667777777655
No 238
>KOG0983|consensus
Probab=27.74 E-value=43 Score=33.30 Aligned_cols=37 Identities=35% Similarity=0.546 Sum_probs=26.8
Q ss_pred HhhHHHHHHHHh---cc--CCCCCCceEEecCCcEEEEeccc
Q psy8358 212 STAAYSLVCYLL---QV--KDRHNGNILLSGEGHLIHIDFGF 248 (424)
Q Consensus 212 SlA~~sv~~yiL---gi--gDRH~~NIli~~~G~~~HIDFg~ 248 (424)
+.|+.+.+.|+= || .|--+.|||+|..|.+=-+|||.
T Consensus 197 tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGI 238 (391)
T KOG0983|consen 197 TVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGI 238 (391)
T ss_pred HHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccc
Confidence 455555566642 22 35558999999999999999974
No 239
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=27.63 E-value=34 Score=31.88 Aligned_cols=27 Identities=26% Similarity=0.336 Sum_probs=23.5
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
||-.++||+++.+|.+.-+|||..-..
T Consensus 127 ~dl~p~nili~~~~~~~l~dfg~~~~~ 153 (261)
T cd05072 127 RDLRAANVLVSESLMCKIADFGLARVI 153 (261)
T ss_pred cccchhhEEecCCCcEEECCCccceec
Confidence 677899999999999999999987543
No 240
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=27.58 E-value=46 Score=30.76 Aligned_cols=26 Identities=19% Similarity=0.262 Sum_probs=23.2
Q ss_pred cCCCCCCceEEecCCcEEEEeccccc
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
=||=+++|||++.+|.+.=+|||..-
T Consensus 125 H~di~p~nil~~~~~~~~l~df~~~~ 150 (257)
T cd08223 125 HRDLKTQNVFLTRTNIIKVGDLGIAR 150 (257)
T ss_pred ccCCCchhEEEecCCcEEEecccceE
Confidence 38999999999999999999999653
No 241
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=27.47 E-value=92 Score=29.59 Aligned_cols=28 Identities=32% Similarity=0.579 Sum_probs=24.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccccCC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSLS 253 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~~ 253 (424)
||-.++|||++.+|.+.=+|||......
T Consensus 126 ~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 126 RDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred cCCChhhEEEcCCCCEEEccceeeeecc
Confidence 8999999999999999999999876543
No 242
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=27.40 E-value=40 Score=33.11 Aligned_cols=25 Identities=32% Similarity=0.504 Sum_probs=22.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||=.++|||++.+|++.=+|||..-
T Consensus 128 ~dlkp~Nil~~~~~~~kl~Dfg~~~ 152 (331)
T cd06649 128 RDVKPSNILVNSRGEIKLCDFGVSG 152 (331)
T ss_pred CCCChhhEEEcCCCcEEEccCcccc
Confidence 7999999999999999999999763
No 243
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=27.38 E-value=29 Score=32.73 Aligned_cols=25 Identities=28% Similarity=0.525 Sum_probs=23.1
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||=+++||+++.+|.+.-+|||..-
T Consensus 125 ~dl~p~nil~~~~~~~~l~dfg~~~ 149 (285)
T cd07861 125 RDLKPQNLLIDNKGVIKLADFGLAR 149 (285)
T ss_pred cCCCHHHEEEcCCCcEEECccccee
Confidence 8999999999999999999999763
No 244
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=27.29 E-value=28 Score=34.18 Aligned_cols=25 Identities=32% Similarity=0.599 Sum_probs=22.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++|||++.+|.+.=+|||..-
T Consensus 119 ~Dlkp~NIll~~~~~~kL~Dfg~~~ 143 (323)
T cd05595 119 RDIKLENLMLDKDGHIKITDFGLCK 143 (323)
T ss_pred cCCCHHHEEEcCCCCEEecccHHhc
Confidence 7888999999999999999999764
No 245
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=27.29 E-value=35 Score=34.32 Aligned_cols=27 Identities=37% Similarity=0.637 Sum_probs=24.3
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
+|=.++||||+.+|++.=+|||.....
T Consensus 166 rDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 166 RDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred cCCCHHHEEEcCCCCEEEEeccceeec
Confidence 888999999999999999999987544
No 246
>KOG0662|consensus
Probab=27.10 E-value=87 Score=29.22 Aligned_cols=64 Identities=25% Similarity=0.472 Sum_probs=40.7
Q ss_pred ccHHHHHHHHhCCCChHHHHHHHHHHHHHh-h--HHHHHHHHhccCCCCCCceEEecCCcEEEEecccc--ccC
Q psy8358 184 VSLLEYFIQEFGDINSEGFLAAQKNFVQST-A--AYSLVCYLLQVKDRHNGNILLSGEGHLIHIDFGFI--LSL 252 (424)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~r~~F~~Sl-A--~~sv~~yiLgigDRH~~NIli~~~G~~~HIDFg~~--fg~ 252 (424)
..|..||-+-.++-+++ ..+.|+-.+ - ++|-...+|. .|-.+.|+||+++|++=-.|||.. ||.
T Consensus 85 qdlkkyfdslng~~d~~----~~rsfmlqllrgl~fchshnvlh-rdlkpqnllin~ngelkladfglarafgi 153 (292)
T KOG0662|consen 85 QDLKKYFDSLNGDLDPE----IVRSFMLQLLRGLGFCHSHNVLH-RDLKPQNLLINRNGELKLADFGLARAFGI 153 (292)
T ss_pred HHHHHHHHhcCCcCCHH----HHHHHHHHHHhhhhhhhhhhhhh-ccCCcceEEeccCCcEEecccchhhhcCC
Confidence 45777887766665543 223333322 1 2333334443 688899999999999999999874 554
No 247
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=27.07 E-value=30 Score=33.31 Aligned_cols=26 Identities=35% Similarity=0.566 Sum_probs=23.3
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=+++|||++.+|.+.=+|||..-.
T Consensus 127 ~dlkp~Nill~~~~~~kl~Dfg~~~~ 152 (303)
T cd07869 127 RDLKPQNLLISDTGELKLADFGLARA 152 (303)
T ss_pred CCCCHHHEEECCCCCEEECCCCccee
Confidence 78999999999999999999998643
No 248
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=26.98 E-value=36 Score=33.92 Aligned_cols=27 Identities=26% Similarity=0.466 Sum_probs=24.0
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
+|=.++|||++.+|.+.=+|||..-..
T Consensus 150 ~Dlkp~NIll~~~~~~kL~DfG~a~~~ 176 (364)
T cd07875 150 RDLKPSNIVVKSDCTLKILDFGLARTA 176 (364)
T ss_pred CCCCHHHEEECCCCcEEEEeCCCcccc
Confidence 788999999999999999999987543
No 249
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=26.98 E-value=1.7e+02 Score=27.22 Aligned_cols=26 Identities=27% Similarity=0.400 Sum_probs=23.0
Q ss_pred CCCCCCceEEec-CCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSG-EGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~-~G~~~HIDFg~~fg 251 (424)
+|=++.|||++. +|.+.-+|||..-.
T Consensus 132 ~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 132 RDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred cCCCHHHEEEcCCCCeEEEecchhhee
Confidence 899999999997 89999999997643
No 250
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=26.90 E-value=57 Score=32.22 Aligned_cols=27 Identities=26% Similarity=0.474 Sum_probs=24.1
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
||-+++|||++.+|.+.=+|||.....
T Consensus 141 ~dlkp~NIll~~~~~~kL~dfg~~~~~ 167 (342)
T cd07879 141 RDLKPGNLAVNEDCELKILDFGLARHA 167 (342)
T ss_pred CCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence 899999999999999999999987543
No 251
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=26.68 E-value=34 Score=32.43 Aligned_cols=26 Identities=31% Similarity=0.502 Sum_probs=23.4
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=.++|||++.+|.+.=+|||+.--
T Consensus 132 ~dikp~Nili~~~~~~kl~dfg~~~~ 157 (288)
T cd07863 132 RDLKPENILVTSGGQVKLADFGLARI 157 (288)
T ss_pred CCCCHHHEEECCCCCEEECccCcccc
Confidence 89999999999999999999997643
No 252
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=26.67 E-value=33 Score=33.57 Aligned_cols=26 Identities=38% Similarity=0.616 Sum_probs=23.3
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=.++|||++.+|.+.-+|||..-.
T Consensus 120 rdikp~Nil~~~~~~~kl~Dfg~~~~ 145 (316)
T cd05619 120 RDLKLDNILLDTDGHIKIADFGMCKE 145 (316)
T ss_pred CCCCHHHEEECCCCCEEEccCCcceE
Confidence 78899999999999999999997643
No 253
>KOG2464|consensus
Probab=26.51 E-value=46 Score=31.92 Aligned_cols=17 Identities=41% Similarity=0.718 Sum_probs=14.8
Q ss_pred hccCCCCCCceEEecCC
Q psy8358 223 LQVKDRHNGNILLSGEG 239 (424)
Q Consensus 223 LgigDRH~~NIli~~~G 239 (424)
+.--|.|++||||+++|
T Consensus 159 ~~hrdl~~gnili~k~~ 175 (246)
T KOG2464|consen 159 FEHRDLHLGNILIKKTG 175 (246)
T ss_pred ccccccCcCcEEEeccc
Confidence 45579999999999988
No 254
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=26.46 E-value=5.2e+02 Score=23.87 Aligned_cols=26 Identities=27% Similarity=0.310 Sum_probs=23.1
Q ss_pred cCCCCCCceEEecCCcEEEEeccccc
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
-||=.++|||++.+|.+.=+|||..-
T Consensus 130 H~dl~p~nili~~~~~~~l~d~g~~~ 155 (270)
T cd05056 130 HRDIAARNVLVSSPDCVKLGDFGLSR 155 (270)
T ss_pred ccccChheEEEecCCCeEEccCceee
Confidence 46888999999999999999999764
No 255
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=26.35 E-value=37 Score=32.01 Aligned_cols=26 Identities=35% Similarity=0.562 Sum_probs=23.8
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||-+++||+++.+|.+.=+|||....
T Consensus 123 ~dl~p~nil~~~~~~~~l~df~~~~~ 148 (283)
T cd07835 123 RDLKPQNLLIDREGALKLADFGLARA 148 (283)
T ss_pred CCCCHHHEEEcCCCcEEEeecccccc
Confidence 89999999999999999999998753
No 256
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=26.16 E-value=38 Score=33.91 Aligned_cols=26 Identities=31% Similarity=0.473 Sum_probs=22.9
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=.++|||++.+|.+.-+|||..--
T Consensus 127 ~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 127 RDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred CCCChHHEEECCCCCEEeccccceee
Confidence 67788899999999999999997653
No 257
>PLN02236 choline kinase
Probab=26.15 E-value=57 Score=32.85 Aligned_cols=35 Identities=17% Similarity=0.186 Sum_probs=28.4
Q ss_pred HHHhccCCCCCCceEEec-CCcEEEEeccccccCCC
Q psy8358 220 CYLLQVKDRHNGNILLSG-EGHLIHIDFGFILSLSP 254 (424)
Q Consensus 220 ~yiLgigDRH~~NIli~~-~G~~~HIDFg~~fg~~~ 254 (424)
..++-=+|=|.+|||++. +|.+.=|||.+.--..|
T Consensus 199 ~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~~ 234 (344)
T PLN02236 199 EIGFCHNDLQYGNIMIDEETRAITIIDYEYASYNPV 234 (344)
T ss_pred CceEEeCCCCcCcEEEeCCCCcEEEEeehhccccch
Confidence 346677999999999997 78899999988765543
No 258
>PRK12396 5-methylribose kinase; Reviewed
Probab=26.11 E-value=50 Score=34.42 Aligned_cols=28 Identities=21% Similarity=0.271 Sum_probs=21.8
Q ss_pred ccCCCCCCceEEecCCcEEEEeccccccC
Q psy8358 224 QVKDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 224 gigDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
==||=|++|||++.++ ..=||.-|.|=-
T Consensus 230 lHGDlHtGSI~v~~~~-~kvIDpEFAfyG 257 (409)
T PRK12396 230 IHGDLHTGSVFVKNDS-TKVIDPEFAFYG 257 (409)
T ss_pred ccCcCCCCCEEecCCc-eEEEcccccccC
Confidence 3599999999999865 666787776654
No 259
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=25.99 E-value=1.3e+02 Score=29.64 Aligned_cols=27 Identities=26% Similarity=0.466 Sum_probs=23.7
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
+|=.++||||+.+|.+.=+|||..-..
T Consensus 143 rDikp~Nill~~~~~~kl~Dfg~~~~~ 169 (355)
T cd07874 143 RDLKPSNIVVKSDCTLKILDFGLARTA 169 (355)
T ss_pred CCCChHHEEECCCCCEEEeeCcccccC
Confidence 688899999999999999999987543
No 260
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=25.98 E-value=44 Score=30.91 Aligned_cols=27 Identities=30% Similarity=0.452 Sum_probs=23.4
Q ss_pred cCCCCCCceEEecCCcEEEEecccccc
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
-||=+++|||++.+|.+.=+|||..-.
T Consensus 120 H~di~p~nil~~~~~~~kl~dfg~~~~ 146 (257)
T cd05040 120 HRDLAARNILLASDDKVKIGDFGLMRA 146 (257)
T ss_pred ccccCcccEEEecCCEEEecccccccc
Confidence 378899999999999999999997643
No 261
>KOG0583|consensus
Probab=25.93 E-value=1.4e+02 Score=30.45 Aligned_cols=111 Identities=27% Similarity=0.322 Sum_probs=65.8
Q ss_pred CceeecceEEEecCCCc-eeeeeCCcccHHHHHhhccccHHHHHHHHhCCCChHHHHHHHHHHHHHhhHHHHHHHHhcc-
Q psy8358 148 PLILHPYKILCLSNDSG-LIEPILNTVSLHQIKKNSQVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQV- 225 (424)
Q Consensus 148 ~l~l~~Y~vip~~~~~G-lIE~v~~~~tl~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~F~~SlA~~sv~~yiLgi- 225 (424)
+--++.|.|+++....- ++|.+.+ +.|.+|+.+. + +-.+ .++|.-|-.=+.|..- ++-.||
T Consensus 80 pnI~~l~ev~~t~~~~~ivmEy~~g------------GdL~~~i~~~-g-~l~E--~~ar~~F~Qlisav~y-~H~~gi~ 142 (370)
T KOG0583|consen 80 PNIIRLLEVFATPTKIYIVMEYCSG------------GDLFDYIVNK-G-RLKE--DEARKYFRQLISAVAY-CHSRGIV 142 (370)
T ss_pred CCEeEEEEEEecCCeEEEEEEecCC------------ccHHHHHHHc-C-CCCh--HHHHHHHHHHHHHHHH-HHhCCEe
Confidence 35678899999876633 3455443 4566676662 2 2222 4555555544444333 333444
Q ss_pred -CCCCCCceEEecC-CcEEEEeccccccC---CCCCCCCCCCCccccHHHHHHhC
Q psy8358 226 -KDRHNGNILLSGE-GHLIHIDFGFILSL---SPRNLGFETSPFKLTLEVVEVFG 275 (424)
Q Consensus 226 -gDRH~~NIli~~~-G~~~HIDFg~~fg~---~~~~~~~E~vPFrLT~~~~~~mg 275 (424)
.|==++|||+|.+ |++-=+|||+.=-. +...-.+.-.|-=-.||.+..-+
T Consensus 143 HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~ 197 (370)
T KOG0583|consen 143 HRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKG 197 (370)
T ss_pred eCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCC
Confidence 5667899999997 99999999987533 22222234455555666665443
No 262
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=25.89 E-value=1.8e+02 Score=26.76 Aligned_cols=28 Identities=29% Similarity=0.310 Sum_probs=23.5
Q ss_pred ccCCCCCCceEEecCCcEEEEecccccc
Q psy8358 224 QVKDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 224 gigDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
--+|-+++||+++.+|.+.=+|||..-.
T Consensus 122 ~H~dl~p~ni~i~~~~~~kl~d~g~~~~ 149 (256)
T cd05114 122 IHRDLAARNCLVSSTGVVKVSDFGMTRY 149 (256)
T ss_pred cccccCcceEEEcCCCeEEECCCCCccc
Confidence 3468889999999999999999997643
No 263
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=25.86 E-value=37 Score=33.79 Aligned_cols=25 Identities=28% Similarity=0.500 Sum_probs=22.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=+++|||++.+|.+.=+|||..-
T Consensus 147 rDlkp~NIl~~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 147 RDLKPSNIVVKSDCTLKILDFGLAR 171 (359)
T ss_pred CCCCHHHEEECCCCCEEEecCCCcc
Confidence 6889999999999999999999764
No 264
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=25.85 E-value=38 Score=33.31 Aligned_cols=25 Identities=36% Similarity=0.639 Sum_probs=22.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++||||+.+|++.=+|||..-
T Consensus 120 ~Dikp~Nili~~~~~~kL~DfG~~~ 144 (329)
T cd05618 120 RDLKLDNVLLDSEGHIKLTDYGMCK 144 (329)
T ss_pred CCCCHHHEEECCCCCEEEeeCCccc
Confidence 7899999999999999999999764
No 265
>KOG0605|consensus
Probab=25.83 E-value=39 Score=36.13 Aligned_cols=29 Identities=31% Similarity=0.592 Sum_probs=23.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccccCCC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSLSP 254 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~~~ 254 (424)
.|=-+||+|||.+||+=-.|||.+=|-..
T Consensus 265 RDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 265 RDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred ccCChhheeecCCCCEeeccccccchhhh
Confidence 36669999999999999999999844433
No 266
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=25.75 E-value=34 Score=33.41 Aligned_cols=25 Identities=40% Similarity=0.658 Sum_probs=22.5
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++|||++.+|.+.-+|||+.-
T Consensus 120 ~dlkp~Nill~~~~~~kl~Dfg~~~ 144 (318)
T cd05570 120 RDLKLDNVLLDSEGHIKIADFGMCK 144 (318)
T ss_pred cCCCHHHeEECCCCcEEecccCCCe
Confidence 7888999999999999999999763
No 267
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=25.72 E-value=47 Score=31.24 Aligned_cols=28 Identities=29% Similarity=0.478 Sum_probs=24.6
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccC
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
-||-+++||+++.+|++.=+|||+....
T Consensus 130 h~~l~~~nili~~~~~~~l~dfg~~~~~ 157 (287)
T cd07838 130 HRDLKPQNILVTSDGQVKIADFGLARIY 157 (287)
T ss_pred eccCChhhEEEccCCCEEEeccCcceec
Confidence 4899999999999999999999977443
No 268
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=25.64 E-value=1.1e+02 Score=28.96 Aligned_cols=26 Identities=38% Similarity=0.620 Sum_probs=23.3
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||-+++||+++.+|.+.=+|||..-.
T Consensus 152 ~dlkp~nili~~~~~~kl~dfg~~~~ 177 (291)
T cd06639 152 RDVKGNNILLTTEGGVKLVDFGVSAQ 177 (291)
T ss_pred cCCCHHHEEEcCCCCEEEeecccchh
Confidence 79999999999999999999997654
No 269
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=25.57 E-value=43 Score=31.50 Aligned_cols=28 Identities=36% Similarity=0.625 Sum_probs=24.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccccCC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSLS 253 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~~ 253 (424)
||-+++||+++.+|++.=+|||......
T Consensus 124 ~dl~p~nil~~~~~~~~l~dfg~~~~~~ 151 (286)
T cd07847 124 RDVKPENILITKQGQIKLCDFGFARILT 151 (286)
T ss_pred cCCChhhEEEcCCCcEEECccccceecC
Confidence 8999999999999999999999876543
No 270
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=25.51 E-value=1.4e+02 Score=28.48 Aligned_cols=27 Identities=37% Similarity=0.637 Sum_probs=24.1
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
||=.++|||++.+|.+.=+|||.....
T Consensus 140 ~dLkp~Nill~~~~~~kl~dfg~~~~~ 166 (296)
T cd06654 140 RDIKSDNILLGMDGSVKLTDFGFCAQI 166 (296)
T ss_pred CCCCHHHEEEcCCCCEEECccccchhc
Confidence 899999999999999999999976543
No 271
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=25.48 E-value=48 Score=31.57 Aligned_cols=26 Identities=35% Similarity=0.607 Sum_probs=23.5
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||=+++||+++.+|++.=+|||....
T Consensus 134 ~dlkp~Nili~~~~~~kl~dfg~~~~ 159 (292)
T cd06644 134 RDLKAGNVLLTLDGDIKLADFGVSAK 159 (292)
T ss_pred cCCCcceEEEcCCCCEEEccCcccee
Confidence 89999999999999999999997653
No 272
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=25.32 E-value=1.8e+02 Score=27.54 Aligned_cols=26 Identities=35% Similarity=0.555 Sum_probs=23.2
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=+++|||++.+|.+-=+|||....
T Consensus 126 ~dikp~Nili~~~~~~kl~Dfg~~~~ 151 (285)
T cd05632 126 RDLKPENILLDDYGHIRISDLGLAVK 151 (285)
T ss_pred cCCCHHHEEECCCCCEEEecCCccee
Confidence 78899999999999999999997754
No 273
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=25.30 E-value=44 Score=33.72 Aligned_cols=49 Identities=27% Similarity=0.409 Sum_probs=32.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccccCCCCCC----CCCCCCccccHHHHHHh
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSLSPRNL----GFETSPFKLTLEVVEVF 274 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~~~~~~----~~E~vPFrLT~~~~~~m 274 (424)
+|=.++||||+.+|++.=+|||..-....... ..--.|.-+.||++...
T Consensus 166 rDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 218 (371)
T cd05622 166 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ 218 (371)
T ss_pred CCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhcc
Confidence 78899999999999999999998754322111 01123444667776544
No 274
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=25.16 E-value=40 Score=31.44 Aligned_cols=26 Identities=19% Similarity=0.290 Sum_probs=23.3
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||=+++||+++.+|.+.-+|||....
T Consensus 130 ~dl~~~nil~~~~~~~~l~d~g~~~~ 155 (267)
T cd08228 130 RDIKPANVFITATGVVKLGDLGLGRF 155 (267)
T ss_pred CCCCHHHEEEcCCCCEEECcccccee
Confidence 79999999999999999999997654
No 275
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=25.16 E-value=37 Score=33.06 Aligned_cols=30 Identities=30% Similarity=0.486 Sum_probs=26.1
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccCCC
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSLSP 254 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~~~ 254 (424)
=||=+++|||++.+|++.=+|||..-....
T Consensus 126 H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 126 HRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred cCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 389999999999999999999998876544
No 276
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=25.10 E-value=51 Score=30.50 Aligned_cols=26 Identities=31% Similarity=0.405 Sum_probs=23.3
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||=.++|||++.+|.+.=+|||....
T Consensus 124 ~dl~p~nili~~~~~~~l~dfg~~~~ 149 (255)
T cd08219 124 RDIKSKNIFLTQNGKVKLGDFGSARL 149 (255)
T ss_pred CCCCcceEEECCCCcEEEcccCccee
Confidence 78899999999999999999998643
No 277
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=25.09 E-value=54 Score=33.10 Aligned_cols=71 Identities=20% Similarity=0.115 Sum_probs=41.4
Q ss_pred CCCCCCceEEecCCc-EEEEeccccccCCCCCCCCCCCCccccHHHHHHh----CCCcchhhHHHHHHHHHHHHhcChhH
Q psy8358 226 KDRHNGNILLSGEGH-LIHIDFGFILSLSPRNLGFETSPFKLTLEVVEVF----GGVDMFCYFKILMLQGLIAARKHMDK 300 (424)
Q Consensus 226 gDRH~~NIli~~~G~-~~HIDFg~~fg~~~~~~~~E~vPFrLT~~~~~~m----g~~~~~~~f~~~~~~~~~~LR~~~~~ 300 (424)
||=|++|++++.+.. +-=||||.+-.. ||- -++..++ +...........+..+|...|.=...
T Consensus 202 ~D~~~~NVl~d~~~~~~g~iDFdDa~~~----------~~i--~DlAi~l~~~~~d~~~~~~~~~a~l~GY~~v~pl~~~ 269 (331)
T COG2334 202 GDLHPDNVLFDDDTDVSGFIDFDDAGYG----------WFI--YDLAIALNAWNGDEADPRAAIAAFLEGYEEVRPLTAA 269 (331)
T ss_pred cCCCccceeEcCCCCeeeEEEccccccc----------hHH--HHHHHHHHHhhcCCCCcHHHHHHHHHHHHhcCCCCHH
Confidence 899999999998654 556899887332 111 1222222 33333444566677777777765444
Q ss_pred HHHHHHHH
Q psy8358 301 ILSLVEIM 308 (424)
Q Consensus 301 i~~ll~~~ 308 (424)
=+.++..|
T Consensus 270 El~~Lp~l 277 (331)
T COG2334 270 ELELLPDL 277 (331)
T ss_pred HHHHHHHH
Confidence 44444333
No 278
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=24.87 E-value=52 Score=34.18 Aligned_cols=45 Identities=22% Similarity=0.239 Sum_probs=31.3
Q ss_pred HHHHHHhhHHHH---HHHHhccCCCCCCceEEecCCcEEEEeccccccC
Q psy8358 207 KNFVQSTAAYSL---VCYLLQVKDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 207 ~~F~~SlA~~sv---~~yiLgigDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
..|..||++.-- .-|=+-=.|-|.+||||+ +|+|--|||-+.=-+
T Consensus 324 lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl~ 371 (488)
T COG5072 324 LSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRLS 371 (488)
T ss_pred HHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeecc
Confidence 567777776311 112233458899999999 999999999766433
No 279
>PF01386 Ribosomal_L25p: Ribosomal L25p family; InterPro: IPR020055 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This entry models the short-form of the ribosomal L25 protein. The long-form has homology to the general stress protein Ctc of Bacillus subtilis, a mesophile, and ribosomal protein TL5 of Thermus thermophilus, a thermophile. Ribosomal protein L25 of Escherichia coli and Haemophilus influenzae appear to be orthologous but consist only of the N-terminal half of Ctc and TL5. Both short (L25-like) and full-length (CTC-like) members of this family bind the E-loop of bacterial 5S rRNA.; GO: 0003735 structural constituent of ribosome, 0008097 5S rRNA binding, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2HGQ_Y 2HGJ_Y 2Y19_Z 2WRL_Z 3KIT_Z 2WH2_Z 2WDN_Z 3V25_Z 3HUZ_Z 3KIY_Z ....
Probab=24.85 E-value=60 Score=25.98 Aligned_cols=9 Identities=33% Similarity=0.999 Sum_probs=6.5
Q ss_pred CCcEEEEec
Q psy8358 238 EGHLIHIDF 246 (424)
Q Consensus 238 ~G~~~HIDF 246 (424)
++++.||||
T Consensus 80 ~~~i~HvDF 88 (88)
T PF01386_consen 80 TDKILHVDF 88 (88)
T ss_dssp SSSEEEEEE
T ss_pred CCCeEeccC
Confidence 677777776
No 280
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=24.54 E-value=39 Score=31.28 Aligned_cols=28 Identities=29% Similarity=0.490 Sum_probs=24.2
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccC
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
-||-+++||+++.+|.+.=+|||..-..
T Consensus 123 H~~l~~~ni~~~~~~~~~l~df~~~~~~ 150 (264)
T cd06623 123 HRDIKPSNLLINSKGEVKIADFGISKVL 150 (264)
T ss_pred cCCCCHHHEEECCCCCEEEccCccceec
Confidence 3789999999999999999999976544
No 281
>PRK06148 hypothetical protein; Provisional
Probab=24.50 E-value=1.6e+02 Score=34.39 Aligned_cols=27 Identities=30% Similarity=0.480 Sum_probs=22.8
Q ss_pred CCCCCCceEEecCC--cEE-EEeccccccC
Q psy8358 226 KDRHNGNILLSGEG--HLI-HIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G--~~~-HIDFg~~fg~ 252 (424)
||=|.+|||++.++ ++. -||||.+.-.
T Consensus 208 gDln~~NiLv~~~~~~~isGiIDFgDa~~~ 237 (1013)
T PRK06148 208 NDANDYNILVDADDGERISGLIDFGDAVHA 237 (1013)
T ss_pred CCCCcccEEEcCCCCcceEEEEECcccccc
Confidence 89999999999764 777 8999988655
No 282
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=24.34 E-value=52 Score=32.44 Aligned_cols=25 Identities=32% Similarity=0.504 Sum_probs=22.9
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|-.++|||++.+|.+.=+|||...
T Consensus 128 ~dlkp~Nili~~~~~~kL~Dfg~~~ 152 (333)
T cd06650 128 RDVKPSNILVNSRGEIKLCDFGVSG 152 (333)
T ss_pred cCCChhhEEEcCCCCEEEeeCCcch
Confidence 7999999999999999999999764
No 283
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=24.21 E-value=38 Score=30.91 Aligned_cols=32 Identities=28% Similarity=0.392 Sum_probs=27.0
Q ss_pred ccCCCCCCceEEecCCcEEEEeccccccCCCC
Q psy8358 224 QVKDRHNGNILLSGEGHLIHIDFGFILSLSPR 255 (424)
Q Consensus 224 gigDRH~~NIli~~~G~~~HIDFg~~fg~~~~ 255 (424)
--||-+++||+++.+|.+.=+|||+.......
T Consensus 123 ~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 123 VHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred cccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 34899999999999999999999987666543
No 284
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=24.14 E-value=47 Score=30.81 Aligned_cols=25 Identities=20% Similarity=0.339 Sum_probs=22.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||=+++||+++.+|.+.=+|||...
T Consensus 130 ~dl~p~nil~~~~~~~~l~d~~~~~ 154 (267)
T cd08224 130 RDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred CCcChhhEEECCCCcEEEeccceee
Confidence 8999999999999999999999764
No 285
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=24.14 E-value=56 Score=33.92 Aligned_cols=29 Identities=31% Similarity=0.370 Sum_probs=23.7
Q ss_pred HhccCCCCCCceEEecCCcEEEEecccccc
Q psy8358 222 LLQVKDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 222 iLgigDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
.|-=||=|++|||++.+ .+.=|||-+.+-
T Consensus 224 ~l~HgDl~~gni~~~~~-~~~viD~E~a~~ 252 (401)
T PRK09550 224 ALLHGDLHTGSIFVTEE-ETKVIDPEFAFY 252 (401)
T ss_pred ceeeccCCcccEEeeCC-CcEEEecccccc
Confidence 36789999999999876 488999976653
No 286
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=24.12 E-value=1.5e+02 Score=27.05 Aligned_cols=30 Identities=30% Similarity=0.441 Sum_probs=26.1
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccCCC
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSLSP 254 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~~~ 254 (424)
-||=+++||+++.+|.+.=+|||.......
T Consensus 122 H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 151 (254)
T cd06627 122 HRDIKAANILTTKDGVVKLADFGVATKLND 151 (254)
T ss_pred cCCCCHHHEEECCCCCEEEeccccceecCC
Confidence 589999999999999999999998876544
No 287
>KOG1165|consensus
Probab=24.10 E-value=58 Score=33.24 Aligned_cols=26 Identities=35% Similarity=0.666 Sum_probs=19.9
Q ss_pred cCCCCCCceEEec----CCcEEE-Eeccccc
Q psy8358 225 VKDRHNGNILLSG----EGHLIH-IDFGFIL 250 (424)
Q Consensus 225 igDRH~~NIli~~----~G~~~H-IDFg~~f 250 (424)
-.|=-+||.||.+ +-++|| ||||.+=
T Consensus 147 YRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 147 YRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred ecccCccceeecCCCCCCCceEEEEeccchh
Confidence 3566789999974 667888 6999863
No 288
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=24.08 E-value=52 Score=30.30 Aligned_cols=28 Identities=25% Similarity=0.236 Sum_probs=24.8
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccC
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
-+|=.++|||++.+|++-=+|||.....
T Consensus 116 h~di~p~nili~~~~~~~l~d~g~~~~~ 143 (251)
T cd05041 116 HRDLAARNCLVGENNVLKISDFGMSREE 143 (251)
T ss_pred hhhcCcceEEEcCCCcEEEeeccccccc
Confidence 3899999999999999999999987644
No 289
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=24.07 E-value=1.9e+02 Score=27.05 Aligned_cols=26 Identities=12% Similarity=0.036 Sum_probs=22.6
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|-.++||||+.+|.+.=+|||..-.
T Consensus 131 ~dikp~nili~~~~~~~l~dfg~~~~ 156 (266)
T cd05064 131 KGLAAHKVLVNSDLVCKISGFRRLQE 156 (266)
T ss_pred ccccHhhEEEcCCCcEEECCCccccc
Confidence 78899999999999999899986544
No 290
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=23.98 E-value=44 Score=32.55 Aligned_cols=26 Identities=42% Similarity=0.649 Sum_probs=23.3
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||=.++|||++.+|.+.=+|||....
T Consensus 122 ~dlkp~Nil~~~~~~~kL~Dfg~~~~ 147 (318)
T cd05582 122 RDLKPENILLDEEGHIKLTDFGLSKE 147 (318)
T ss_pred CCCCHHHeEECCCCcEEEeeccCCcc
Confidence 78899999999999999999997643
No 291
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=23.60 E-value=2.4e+02 Score=26.42 Aligned_cols=25 Identities=40% Similarity=0.628 Sum_probs=22.7
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||=+++||+++.+|.+.=+|||...
T Consensus 127 ~dl~p~nili~~~~~~~l~d~g~~~ 151 (280)
T cd06611 127 RDLKAGNILLTLDGDVKLADFGVSA 151 (280)
T ss_pred CCCChhhEEECCCCCEEEccCccch
Confidence 8999999999999999999999654
No 292
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=23.36 E-value=45 Score=30.97 Aligned_cols=26 Identities=31% Similarity=0.497 Sum_probs=23.1
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||=+++||+++.+|.+.=+|||....
T Consensus 125 ~dl~~~ni~~~~~~~~~l~d~g~~~~ 150 (265)
T cd06605 125 RDVKPSNILVNSRGQIKLCDFGVSGQ 150 (265)
T ss_pred CCCCHHHEEECCCCCEEEeecccchh
Confidence 78999999999999999999997643
No 293
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=23.31 E-value=1.2e+02 Score=28.18 Aligned_cols=27 Identities=30% Similarity=0.464 Sum_probs=23.9
Q ss_pred cCCCCCCceEEecCCcEEEEecccccc
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
-||=+++||+++.+|.+.=+|||..-.
T Consensus 125 H~dl~p~nil~~~~~~~~l~dfg~~~~ 151 (265)
T cd06631 125 HRDIKGNNVMLMPNGIIKLIDFGCARR 151 (265)
T ss_pred cCCcCHHhEEECCCCeEEeccchhhHh
Confidence 489999999999999999999997653
No 294
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=23.31 E-value=44 Score=32.19 Aligned_cols=27 Identities=33% Similarity=0.567 Sum_probs=24.2
Q ss_pred cCCCCCCceEEecCCcEEEEecccccc
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
-||-+++||+++.+|.+.=+|||..-.
T Consensus 138 H~dL~p~Nili~~~~~~kl~dfg~~~~ 164 (296)
T cd06655 138 HRDIKSDNVLLGMDGSVKLTDFGFCAQ 164 (296)
T ss_pred cCCCCHHHEEECCCCCEEEccCccchh
Confidence 489999999999999999999997654
No 295
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=23.24 E-value=49 Score=31.63 Aligned_cols=26 Identities=23% Similarity=0.270 Sum_probs=23.1
Q ss_pred cCCCCCCceEEecCCcEEEEeccccc
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
=||-+++|||++.+|.+.=+|||..-
T Consensus 152 H~dlkp~Nill~~~~~~kl~dfg~~~ 177 (295)
T cd05097 152 HRDLATRNCLVGNHYTIKIADFGMSR 177 (295)
T ss_pred ccccChhhEEEcCCCcEEeccccccc
Confidence 47999999999999999999999763
No 296
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=23.24 E-value=6.3e+02 Score=23.76 Aligned_cols=26 Identities=35% Similarity=0.590 Sum_probs=23.3
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=.++||+++.+|.+.=+|||....
T Consensus 126 ~dikp~Nil~~~~~~~~l~Dfg~~~~ 151 (285)
T cd05630 126 RDLKPENILLDDHGHIRISDLGLAVH 151 (285)
T ss_pred CCCCHHHEEECCCCCEEEeeccceee
Confidence 68889999999999999999997754
No 297
>PHA03207 serine/threonine kinase US3; Provisional
Probab=23.20 E-value=50 Score=33.46 Aligned_cols=25 Identities=28% Similarity=0.379 Sum_probs=22.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=+++||||+.+|.+.=+|||...
T Consensus 209 rDlkp~Nill~~~~~~~l~DfG~a~ 233 (392)
T PHA03207 209 RDVKTENIFLDEPENAVLGDFGAAC 233 (392)
T ss_pred cCCCHHHEEEcCCCCEEEccCcccc
Confidence 7888999999999999999999764
No 298
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=23.19 E-value=43 Score=33.24 Aligned_cols=25 Identities=36% Similarity=0.655 Sum_probs=22.7
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++|||++.+|.+.=+|||..-
T Consensus 125 ~Dlkp~NIl~~~~~~~kl~Dfg~~~ 149 (364)
T cd05599 125 RDIKPDNLLLDAKGHIKLSDFGLCT 149 (364)
T ss_pred ccCCHHHeEECCCCCEEEeecccce
Confidence 7888999999999999999999764
No 299
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=23.12 E-value=67 Score=29.41 Aligned_cols=30 Identities=37% Similarity=0.620 Sum_probs=25.2
Q ss_pred hccCCCCCCceEEecCCcEEEEeccccccC
Q psy8358 223 LQVKDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 223 LgigDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
+--||=+++||+++.+|.+.=+|||..-..
T Consensus 114 ~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~ 143 (250)
T cd05123 114 IIYRDLKPENILLDADGHIKLTDFGLAKEL 143 (250)
T ss_pred ceecCCCcceEEEcCCCcEEEeecCcceec
Confidence 345899999999999999999999976443
No 300
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=23.08 E-value=49 Score=31.40 Aligned_cols=26 Identities=27% Similarity=0.405 Sum_probs=22.9
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||=+++|||++.+|.+.=+|||..-.
T Consensus 133 ~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 133 RDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred cccchheEEEcCCCCEEECCCccccc
Confidence 68899999999999999999997643
No 301
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=23.08 E-value=1.1e+02 Score=30.10 Aligned_cols=29 Identities=28% Similarity=0.350 Sum_probs=24.8
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccCC
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSLS 253 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~~ 253 (424)
=||-+++|||++.+|.+.=+|||......
T Consensus 131 H~dl~p~Nili~~~~~~~l~dfg~~~~~~ 159 (328)
T cd07856 131 HRDLKPSNILINENCDLKICDFGLARIQD 159 (328)
T ss_pred cCCCCHHHEeECCCCCEEeCccccccccC
Confidence 37889999999999999999999876443
No 302
>KOG3087|consensus
Probab=23.04 E-value=66 Score=30.30 Aligned_cols=103 Identities=17% Similarity=0.205 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHhCCCCceeecceEEEecC--CCceeeeeCCcccHHHHHhhccccHHHHHHHHhCCCChHHHHHHHH
Q psy8358 130 LASQLLTLLQKIWDIERVPLILHPYKILCLSN--DSGLIEPILNTVSLHQIKKNSQVSLLEYFIQEFGDINSEGFLAAQK 207 (424)
Q Consensus 130 ~~~Q~~~~~~~i~~~~~~~l~l~~Y~vip~~~--~~GlIE~v~~~~tl~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~r~ 207 (424)
|+.|=.+++++... +-|....++.... ++=.+||++++.++.+. +.+...++..+ +...
T Consensus 56 Rt~~Ear~l~k~~~-----~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~-----------i~~~~~~~~~d---~~~~ 116 (229)
T KOG3087|consen 56 RTKQEARLLAKCRA-----LGIPAPRLIFIDTYGGQIYMEFIDGASTVKDF-----------ILSTMEDESED---EGLA 116 (229)
T ss_pred HHHHHHHHHHHHHH-----hCCCCceEEEEecCCCeEEEEeccchhHHHHH-----------HHHHccCcccc---hhHH
Confidence 44444555555443 2456667777544 45567999887666553 33332222211 1112
Q ss_pred HHHHHh----hHHHHHHHHhccCCCCCCceEEec-CCcE--EEEeccccccCC
Q psy8358 208 NFVQST----AAYSLVCYLLQVKDRHNGNILLSG-EGHL--IHIDFGFILSLS 253 (424)
Q Consensus 208 ~F~~Sl----A~~sv~~yiLgigDRH~~NIli~~-~G~~--~HIDFg~~fg~~ 253 (424)
+|.+-. |-+=--.+| =||-..+|||+.. .+++ +-||||.-+.+.
T Consensus 117 ~~~~~iG~~igklH~ndii--HGDLTTSNill~~~~~~~~~~lIdfgls~~s~ 167 (229)
T KOG3087|consen 117 ELARRIGELIGKLHDNDII--HGDLTTSNILLRSDGNQITPILIDFGLSSVSR 167 (229)
T ss_pred HHHHHHHHHHHHhhhCCee--cccccccceEEecCCCcCceEEEeecchhccc
Confidence 222222 111111111 2899999999997 6666 899999887764
No 303
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=23.01 E-value=55 Score=30.52 Aligned_cols=25 Identities=32% Similarity=0.389 Sum_probs=21.9
Q ss_pred CCCCCCceEEecCC-----cEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEG-----HLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G-----~~~HIDFg~~f 250 (424)
||-+++|||++.++ .+.-+|||..-
T Consensus 130 ~dl~p~nil~~~~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 130 RDLAARNCLVSEKGYDADRVVKIGDFGLAR 159 (269)
T ss_pred CCCChheEEEecCCCCCCcceEECCccccc
Confidence 79999999999877 88899999764
No 304
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=22.92 E-value=48 Score=33.22 Aligned_cols=24 Identities=38% Similarity=0.642 Sum_probs=22.1
Q ss_pred CCCCCCceEEecCCcEEEEecccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
+|=.++||||+.+|.+.=+|||..
T Consensus 125 rDlkp~NIll~~~~~~kl~DfGla 148 (377)
T cd05629 125 RDIKPDNILIDRGGHIKLSDFGLS 148 (377)
T ss_pred cCCCHHHEEECCCCCEEEeecccc
Confidence 688899999999999999999976
No 305
>PF11094 UL11: Membrane-associated tegument protein; InterPro: IPR024351 The UL11 gene product of herpes simplex virus is a membrane-associated tegument protein that is incorporated into the HSV virion and functions in viral envelopment []. UL11 is acylated, which is crucial for lipid raft association [].
Probab=22.80 E-value=66 Score=22.00 Aligned_cols=17 Identities=24% Similarity=0.513 Sum_probs=14.7
Q ss_pred CCceEEecCCcEEEEec
Q psy8358 230 NGNILLSGEGHLIHIDF 246 (424)
Q Consensus 230 ~~NIli~~~G~~~HIDF 246 (424)
--|+|++.+|+++-.|=
T Consensus 14 R~N~LvT~~Ge~vsL~a 30 (39)
T PF11094_consen 14 RRNVLVTHSGETVSLDA 30 (39)
T ss_pred ecCEEEccCCeEEEeCh
Confidence 46999999999998874
No 306
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=22.71 E-value=49 Score=31.37 Aligned_cols=25 Identities=44% Similarity=0.713 Sum_probs=22.7
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||=+++||+++.+|.+.=+|||..-
T Consensus 129 ~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 129 RDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred cCCCHHHeEECCCCCEEEEECcccc
Confidence 7999999999999999999999653
No 307
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=22.49 E-value=1.2e+02 Score=29.17 Aligned_cols=26 Identities=35% Similarity=0.661 Sum_probs=23.6
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||-.++||+++.+|.+.=+|||..-.
T Consensus 142 ~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (292)
T cd06658 142 RDIKSDSILLTSDGRIKLSDFGFCAQ 167 (292)
T ss_pred cCCCHHHEEEcCCCCEEEccCcchhh
Confidence 89999999999999999999997643
No 308
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=22.41 E-value=51 Score=30.38 Aligned_cols=27 Identities=37% Similarity=0.549 Sum_probs=24.0
Q ss_pred CCCCCCceEEecCCcEEEEeccccccC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
||=+++||+++.+|.+.=+|||.....
T Consensus 117 ~di~~~nil~~~~~~~~l~dfg~~~~~ 143 (265)
T cd05579 117 RDLKPDNILIDSNGHLKLTDFGLSKVG 143 (265)
T ss_pred CCCCHHHeEEcCCCCEEEEecccchhc
Confidence 899999999999999999999976644
No 309
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=22.39 E-value=48 Score=30.31 Aligned_cols=30 Identities=33% Similarity=0.416 Sum_probs=25.2
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccCCC
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSLSP 254 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~~~ 254 (424)
-||=+++||+++.+|.+.=+|||+..-...
T Consensus 126 H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 126 HRDIKPQNIFLTSNGLVKLGDFGISKVLSS 155 (258)
T ss_pred cccCChHHeEEcCCCcEEECCccceeeccc
Confidence 478999999999999999999998755433
No 310
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=22.36 E-value=48 Score=31.21 Aligned_cols=28 Identities=36% Similarity=0.561 Sum_probs=24.4
Q ss_pred CCCCCCceEEecCCcEEEEeccccccCC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSLS 253 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~~ 253 (424)
||=+++||+++.+|.+.=+|||......
T Consensus 123 ~dl~p~ni~~~~~~~~~l~dfg~~~~~~ 150 (286)
T cd07832 123 RDLKPANLLISADGVLKIADFGLARLFS 150 (286)
T ss_pred CCcCHHHEEEcCCCcEEEeeeeeccccc
Confidence 7999999999999999999999776543
No 311
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=22.32 E-value=66 Score=30.25 Aligned_cols=30 Identities=27% Similarity=0.406 Sum_probs=25.3
Q ss_pred hccCCCCCCceEEecCCcEEEEeccccccC
Q psy8358 223 LQVKDRHNGNILLSGEGHLIHIDFGFILSL 252 (424)
Q Consensus 223 LgigDRH~~NIli~~~G~~~HIDFg~~fg~ 252 (424)
+-=||=+++||+++.+|.+.=+|||..-..
T Consensus 120 i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~ 149 (283)
T cd07830 120 FFHRDLKPENLLVSGPEVVKIADFGLAREI 149 (283)
T ss_pred cccCCCChhhEEEcCCCCEEEeecccceec
Confidence 344899999999999999999999977543
No 312
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=22.19 E-value=46 Score=31.62 Aligned_cols=26 Identities=23% Similarity=0.275 Sum_probs=23.3
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||-+++|||++.+|.+.=+|||..-.
T Consensus 154 ~dl~p~nil~~~~~~~~l~dfg~~~~ 179 (288)
T cd05050 154 RDLATRNCLVGENMVVKIADFGLSRN 179 (288)
T ss_pred ccccHhheEecCCCceEECcccccee
Confidence 78999999999999999999997643
No 313
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=21.97 E-value=1.5e+02 Score=31.70 Aligned_cols=26 Identities=31% Similarity=0.565 Sum_probs=23.3
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|-+++|||++.+|.+.=+|||....
T Consensus 333 rDLKp~NILl~~~~~~kL~DFGla~~ 358 (507)
T PLN03224 333 RDIKPENLLVTVDGQVKIIDFGAAVD 358 (507)
T ss_pred CCCchHhEEECCCCcEEEEeCcCccc
Confidence 78899999999999999999998743
No 314
>COG3960 Glyoxylate carboligase [General function prediction only]
Probab=21.86 E-value=71 Score=32.35 Aligned_cols=28 Identities=29% Similarity=0.619 Sum_probs=22.7
Q ss_pred HHHHhccCC----CCCCceEEecCC-cEEEEec
Q psy8358 219 VCYLLQVKD----RHNGNILLSGEG-HLIHIDF 246 (424)
Q Consensus 219 ~~yiLgigD----RH~~NIli~~~G-~~~HIDF 246 (424)
.-+++|||. ||.++|=+-..| +++|+|-
T Consensus 271 sd~vfgignrwanrhtgsv~vyt~gr~fihvdi 303 (592)
T COG3960 271 SDMVFGIGNRWANRHTGSVEVYTEGRKFIHVDI 303 (592)
T ss_pred hhheeeccchhhhcccCceeeeecCceEEEEec
Confidence 357899996 699999998755 5899996
No 315
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=21.86 E-value=44 Score=32.65 Aligned_cols=25 Identities=36% Similarity=0.545 Sum_probs=22.7
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++|||++.+|.+.=+|||..-
T Consensus 125 rdlkp~Nill~~~~~~kL~Dfg~~~ 149 (324)
T cd05589 125 RDLKLDNLLLDTEGFVKIADFGLCK 149 (324)
T ss_pred cCCCHHHeEECCCCcEEeCcccCCc
Confidence 7888999999999999999999754
No 316
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=21.59 E-value=88 Score=30.86 Aligned_cols=28 Identities=25% Similarity=0.402 Sum_probs=25.1
Q ss_pred CCCCCCceEEecCCcEEEEeccccccCC
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILSLS 253 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg~~ 253 (424)
||-.++||+++.+|.+.=+|||+.....
T Consensus 142 ~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (343)
T cd07851 142 RDLKPSNIAVNEDCELKILDFGLARHTD 169 (343)
T ss_pred CCCCHHHeEECCCCCEEEcccccccccc
Confidence 8999999999999999999999987553
No 317
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=21.59 E-value=51 Score=31.21 Aligned_cols=25 Identities=24% Similarity=0.182 Sum_probs=22.5
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||=.++|||++.+|.+.-+|||..-
T Consensus 146 ~dlkp~nil~~~~~~~kL~dfg~~~ 170 (280)
T cd05092 146 RDLATRNCLVGQGLVVKIGDFGMSR 170 (280)
T ss_pred ccccHhhEEEcCCCCEEECCCCcee
Confidence 7888999999999999999999763
No 318
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=21.42 E-value=55 Score=30.97 Aligned_cols=26 Identities=31% Similarity=0.548 Sum_probs=23.4
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||=.++|||++.+|.+.=+|||....
T Consensus 127 ~dl~p~nil~~~~~~~~l~dfg~~~~ 152 (286)
T cd06622 127 RDVKPTNVLVNGNGQVKLCDFGVSGN 152 (286)
T ss_pred CCCCHHHEEECCCCCEEEeecCCccc
Confidence 89999999999999999999997643
No 319
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=21.35 E-value=61 Score=30.59 Aligned_cols=25 Identities=36% Similarity=0.562 Sum_probs=22.7
Q ss_pred cCCCCCCceEEecCCcEEEEecccc
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFI 249 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~ 249 (424)
-||-+++||+++.+|.+.=+|||..
T Consensus 124 h~dl~p~Ni~i~~~~~~~l~dfg~~ 148 (277)
T cd06641 124 HRDIKAANVLLSEHGEVKLADFGVA 148 (277)
T ss_pred cCCCCHHhEEECCCCCEEEeecccc
Confidence 3799999999999999999999965
No 320
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=21.23 E-value=1.6e+02 Score=27.40 Aligned_cols=25 Identities=28% Similarity=0.287 Sum_probs=22.3
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||=+++||+++.+|.+.=+|||...
T Consensus 130 ~dl~p~nili~~~~~~kl~dfg~~~ 154 (269)
T cd05065 130 RDLAARNILVNSNLVCKVSDFGLSR 154 (269)
T ss_pred cccChheEEEcCCCcEEECCCcccc
Confidence 7999999999999999999999753
No 321
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=21.22 E-value=47 Score=31.14 Aligned_cols=30 Identities=30% Similarity=0.505 Sum_probs=25.6
Q ss_pred cCCCCCCceEEecCCcEEEEeccccccCCC
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFILSLSP 254 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~fg~~~ 254 (424)
-||-+++|||++.+|.+.=+|||.......
T Consensus 123 h~dl~p~nil~~~~~~~~l~d~g~~~~~~~ 152 (287)
T cd07840 123 HRDIKGSNILINNDGVLKLADFGLARPYTK 152 (287)
T ss_pred eccCcHHHeEEcCCCCEEEccccceeeccC
Confidence 489999999999999999999998765543
No 322
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=21.20 E-value=55 Score=30.97 Aligned_cols=26 Identities=27% Similarity=0.486 Sum_probs=23.7
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||=+++|||++.+|.+.=+|||..-.
T Consensus 119 ~dlkp~Nill~~~~~~~l~dfg~~~~ 144 (279)
T cd06619 119 RDVKPSNMLVNTRGQVKLCDFGVSTQ 144 (279)
T ss_pred CCCCHHHEEECCCCCEEEeeCCccee
Confidence 79999999999999999999997754
No 323
>PRK05943 50S ribosomal protein L25; Reviewed
Probab=21.17 E-value=52 Score=26.73 Aligned_cols=9 Identities=56% Similarity=0.859 Sum_probs=5.9
Q ss_pred CCcEEEEec
Q psy8358 238 EGHLIHIDF 246 (424)
Q Consensus 238 ~G~~~HIDF 246 (424)
+|++.||||
T Consensus 83 ~~~i~HvDF 91 (94)
T PRK05943 83 KPKLEHIDF 91 (94)
T ss_pred CCCeEeEee
Confidence 566666666
No 324
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=21.06 E-value=2.7e+02 Score=25.51 Aligned_cols=26 Identities=31% Similarity=0.492 Sum_probs=23.0
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
||=.++|||++.+|.+.=+|||....
T Consensus 125 ~~l~~~nil~~~~~~~~l~d~~~~~~ 150 (256)
T cd08218 125 RDIKSQNIFLTKDGTIKLGDFGIARV 150 (256)
T ss_pred CCCCHHHEEEcCCCCEEEeeccceee
Confidence 78899999999999999999987643
No 325
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=20.84 E-value=2.6e+02 Score=26.49 Aligned_cols=26 Identities=35% Similarity=0.556 Sum_probs=23.1
Q ss_pred CCCCCCceEEecCCcEEEEecccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFILS 251 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~fg 251 (424)
+|=.++|||++.+|++-=+|||....
T Consensus 126 ~dlkp~Nil~~~~~~~~l~Dfg~~~~ 151 (285)
T cd05605 126 RDLKPENILLDDYGHIRISDLGLAVE 151 (285)
T ss_pred cCCCHHHEEECCCCCEEEeeCCCcee
Confidence 78889999999999999999998754
No 326
>KOG0614|consensus
Probab=20.69 E-value=1.3e+02 Score=32.59 Aligned_cols=58 Identities=28% Similarity=0.479 Sum_probs=39.2
Q ss_pred HHHH--HHHHHHHHHhhHHHHHHHHh--------cc--CCCCCCceEEecCCcEEEEecccc--ccCCCCCC
Q psy8358 200 EGFL--AAQKNFVQSTAAYSLVCYLL--------QV--KDRHNGNILLSGEGHLIHIDFGFI--LSLSPRNL 257 (424)
Q Consensus 200 ~~~~--~~r~~F~~SlA~~sv~~yiL--------gi--gDRH~~NIli~~~G~~~HIDFg~~--fg~~~~~~ 257 (424)
+-|- +-|-.|=..+|-++++|-+= || .|--++|+|+|.+|-+=-+||||. .+.+.+-.
T Consensus 506 ElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTw 577 (732)
T KOG0614|consen 506 ELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTW 577 (732)
T ss_pred hhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCcee
Confidence 4453 33445666666666655432 22 588899999999999999999997 34444443
No 327
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=20.60 E-value=61 Score=30.77 Aligned_cols=26 Identities=35% Similarity=0.439 Sum_probs=23.3
Q ss_pred cCCCCCCceEEecCCcEEEEeccccc
Q psy8358 225 VKDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 225 igDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
-+|=+++|||++.+|.+.=+|||..-
T Consensus 126 H~dlkp~Nil~~~~~~~~l~Dfg~~~ 151 (291)
T cd07870 126 HRDLKPQNLLISYLGELKLADFGLAR 151 (291)
T ss_pred cCCCChHHEEEcCCCcEEEecccccc
Confidence 38999999999999999999999653
No 328
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=20.55 E-value=1.6e+02 Score=27.93 Aligned_cols=25 Identities=36% Similarity=0.671 Sum_probs=22.8
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||=+++||+++.+|.+.=+|||..-
T Consensus 139 ~dl~p~Nil~~~~~~~~l~d~g~~~ 163 (285)
T cd06648 139 RDIKSDSILLTSDGRVKLSDFGFCA 163 (285)
T ss_pred CCCChhhEEEcCCCcEEEcccccch
Confidence 8999999999999999999999653
No 329
>cd00495 Ribosomal_L25_TL5_CTC Ribosomal_L25_TL5_CTC: Ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain. L25 is a single-domain protein, homologous to the N-terminal domain of TL5 and CTC, which each contain two domains. CTC is a known stress protein, and proteins of this family are believed to have two functions, acting as both ribosomal and stress proteins. In Escherichia coli, cells deleted for L25 were found to be viable; however, these cells grew slowly and had impaired protein synthesis capability. In Bacillus subtilis, CTC is induced under stress conditions and located in the ribosome; it has been proposed that CTC may be necessary for accurate translation under stress conditions. Ribosomal_L25_TL5_CTC is found only in bacteria and some plastids. Due to its limited taxonomic diversity and the viability of cells deleted for L25, this protein is not believed to be necessary for ribosomal assembly. Eukaryotes contain a protein called L25, which is not homologous to bacterial L
Probab=20.46 E-value=58 Score=26.14 Aligned_cols=9 Identities=33% Similarity=1.047 Sum_probs=5.7
Q ss_pred CCcEEEEec
Q psy8358 238 EGHLIHIDF 246 (424)
Q Consensus 238 ~G~~~HIDF 246 (424)
++++.||||
T Consensus 81 ~~~i~HvDF 89 (91)
T cd00495 81 KDKILHVDF 89 (91)
T ss_pred CCCEEEEec
Confidence 566666666
No 330
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=20.11 E-value=3.6e+02 Score=25.72 Aligned_cols=25 Identities=24% Similarity=0.550 Sum_probs=22.5
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
+|=.++||||+.+|.+.=.|||...
T Consensus 125 ~dlk~~Nili~~~~~~kl~d~~~~~ 149 (314)
T cd08216 125 RSVKASHILLSGDGKVVLSGLRYSV 149 (314)
T ss_pred CCCCcceEEEecCCceEEecCccce
Confidence 7999999999999999999998764
No 331
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=20.00 E-value=64 Score=30.38 Aligned_cols=25 Identities=20% Similarity=0.242 Sum_probs=22.5
Q ss_pred CCCCCCceEEecCCcEEEEeccccc
Q psy8358 226 KDRHNGNILLSGEGHLIHIDFGFIL 250 (424)
Q Consensus 226 gDRH~~NIli~~~G~~~HIDFg~~f 250 (424)
||=.++||+++.+|.+.=+|||...
T Consensus 143 ~dlkp~Nil~~~~~~~~l~dfg~~~ 167 (277)
T cd05062 143 RDLAARNCMVAEDFTVKIGDFGMTR 167 (277)
T ss_pred CCcchheEEEcCCCCEEECCCCCcc
Confidence 6888999999999999999999764
Done!