RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy8358
         (424 letters)



>d1e7ua4 d.144.1.4 (A:726-1094) Phoshoinositide 3-kinase (PI3K),
           catalytic domain {Pig (Sus scrofa) [TaxId: 9823]}
          Length = 369

 Score =  236 bits (604), Expect = 4e-75
 Identities = 91/381 (23%), Positives = 168/381 (44%), Gaps = 39/381 (10%)

Query: 8   RLSPQLEFIRVLINMSKTLASLR-SKEAKTSRLLADLTTL-----NHNLPARVWLPLYSD 61
             + Q++ I +L  ++  + SL   K   +S++++ L        N NLP    +P    
Sbjct: 6   DFTQQVQVIDMLQKVTIDIKSLSAEKYDVSSQVISQLKQKLENLQNLNLPQSFRVPYDPG 65

Query: 62  QPHHIVRIPPSAAAVLNSKDKAPYIIYCEEPWSKKEARIRQSSPYGHIPSWRLMAAIVKS 121
                  +      V+ SK              KK   +          S   +  I K 
Sbjct: 66  --LKAGALVIEKCKVMASK--------------KKPLWLEFKCADPTALSNETIGIIFKH 109

Query: 122 GDDLRQELLASQLLTLLQKIWDIERVPLILHPYKILCLSNDSGLIEPILNTVSLHQIKKN 181
           GDDLRQ++L  Q+L +++ IW+ E + L L PY  +   +  G+IE + +  ++ +I+++
Sbjct: 110 GDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKDATTIAKIQQS 169

Query: 182 S-------QVSLLEYFIQEFGDINSEGFLAAQKNFVQSTAAYSLVCYLLQVKDRHNGNIL 234
           +       +  +L ++++E      E F AA + FV S A Y +  ++L + DRHN NI+
Sbjct: 170 TVGNTGAFKDEVLSHWLKEKCP-IEEKFQAAVERFVYSCAGYCVATFVLGIGDRHNDNIM 228

Query: 235 LSGEGHLIHIDFGFILSLSPRNLGF--ETSPFKLTLEVVEVFG-----GVDMFCYFKILM 287
           +S  G+L HIDFG IL      LG   E  PF LT + + V G         F  F+ + 
Sbjct: 229 ISETGNLFHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSLHFQKFQDVC 288

Query: 288 LQGLIAARKHMDKILSLVEIMRSGSQLPCFKSGAATVQNLKNRFHMNLTEEQLQVLIDKL 347
           ++  +A R H + ++ L  +M   + +P   S    ++ +++   +  +EE  +      
Sbjct: 289 VKAYLALRHHTNLLIILFSMM-LMTGMPQLTSK-EDIEYIRDALTVGKSEEDAKKYFLDQ 346

Query: 348 VDSSIHSLSTKLYDGFQYYTN 368
           ++       T  ++ F +   
Sbjct: 347 IEVCRDKGWTVQFNWFLHLVL 367


>d1piea1 d.14.1.5 (A:9-213) Galactokinase {Lactococcus lactis
           [TaxId: 1358]}
          Length = 205

 Score = 26.0 bits (56), Expect = 7.7
 Identities = 7/34 (20%), Positives = 10/34 (29%), Gaps = 8/34 (23%)

Query: 233 ILLSGEGHLIHIDFGFILSLSPRNLGFETSPFKL 266
           I        I +D           L +E  P +L
Sbjct: 179 IGFGEVKKAIELDC--------NTLKYEMVPVEL 204


>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 318

 Score = 26.0 bits (56), Expect = 9.5
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 227 DRHNGNILLSGEGHLIHIDFGFILSLSP 254
           D    N+L++ +G L   DFG   + S 
Sbjct: 142 DMKAANVLITRDGVLKLADFGLARAFSL 169


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.137    0.399 

Gapped
Lambda     K      H
   0.267   0.0461    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,504,827
Number of extensions: 67533
Number of successful extensions: 198
Number of sequences better than 10.0: 1
Number of HSP's gapped: 194
Number of HSP's successfully gapped: 14
Length of query: 424
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 336
Effective length of database: 1,199,356
Effective search space: 402983616
Effective search space used: 402983616
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.2 bits)