BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8359
(279 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A2A432|CUL4B_MOUSE Cullin-4B OS=Mus musculus GN=Cul4b PE=1 SV=1
Length = 970
Score = 237 bits (605), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 115/147 (78%), Positives = 127/147 (86%), Gaps = 2/147 (1%)
Query: 133 NALGIDLTDADLRRTLQSLACGKTRVLKKTPASRDIEDCDRFRFNNDFTFKLFRIKINQI 192
+A GI+ D +LRRTLQSLACGK RVL K P +DIED D+F N+DF KLFRIKINQI
Sbjct: 826 HATGIE--DGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQI 883
Query: 193 QMKETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLKFPVKPADL 252
QMKET EEQ +T ERVFQDRQYQIDAAIVRIMKMRKTLSHNLL+SE++NQLKFPVKPADL
Sbjct: 884 QMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADL 943
Query: 253 KKRIESLIDRDYMERDKDKANSYNYMA 279
KKRIESLIDRDYMERDK+ N YNY+A
Sbjct: 944 KKRIESLIDRDYMERDKENPNQYNYIA 970
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 54/61 (88%)
Query: 62 KVDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMG 121
K DLAKRLLVGKSASVDAEKSMLSKLK ECG FTSKLEGMFKDMELSKDI + FKQYM
Sbjct: 665 KKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQ 724
Query: 122 N 122
N
Sbjct: 725 N 725
>sp|Q13620|CUL4B_HUMAN Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=4
Length = 913
Score = 236 bits (603), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/146 (78%), Positives = 126/146 (86%), Gaps = 2/146 (1%)
Query: 134 ALGIDLTDADLRRTLQSLACGKTRVLKKTPASRDIEDCDRFRFNNDFTFKLFRIKINQIQ 193
A GI+ D +LRRTLQSLACGK RVL K P +DIED D+F N+DF KLFRIKINQIQ
Sbjct: 770 ATGIE--DGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQ 827
Query: 194 MKETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLKFPVKPADLK 253
MKET EEQ +T ERVFQDRQYQIDAAIVRIMKMRKTLSHNLL+SE++NQLKFPVKPADLK
Sbjct: 828 MKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLK 887
Query: 254 KRIESLIDRDYMERDKDKANSYNYMA 279
KRIESLIDRDYMERDK+ N YNY+A
Sbjct: 888 KRIESLIDRDYMERDKENPNQYNYIA 913
Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 54/61 (88%)
Query: 62 KVDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMG 121
K DLAKRLLVGKSASVDAEKSMLSKLK ECG FTSKLEGMFKDMELSKDI + FKQYM
Sbjct: 608 KKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQ 667
Query: 122 N 122
N
Sbjct: 668 N 668
>sp|Q3TCH7|CUL4A_MOUSE Cullin-4A OS=Mus musculus GN=Cul4a PE=1 SV=1
Length = 759
Score = 234 bits (596), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 113/146 (77%), Positives = 126/146 (86%), Gaps = 2/146 (1%)
Query: 134 ALGIDLTDADLRRTLQSLACGKTRVLKKTPASRDIEDCDRFRFNNDFTFKLFRIKINQIQ 193
A GI+ D++LRRTLQSLACGK RVL K+P +++ED D+F FN DF KLFRIKINQIQ
Sbjct: 616 ATGIE--DSELRRTLQSLACGKARVLIKSPKGKEVEDGDKFIFNADFKHKLFRIKINQIQ 673
Query: 194 MKETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLKFPVKPADLK 253
MKET EEQ +T ERVFQDRQYQIDAAIVRIMKMRKTL HNLL+SEL+NQLKFPVKP DLK
Sbjct: 674 MKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPGDLK 733
Query: 254 KRIESLIDRDYMERDKDKANSYNYMA 279
KRIESLIDRDYMERDKD N Y+Y+A
Sbjct: 734 KRIESLIDRDYMERDKDSPNQYHYVA 759
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 54/61 (88%)
Query: 62 KVDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMG 121
K DLAKRLLVGKSASVDAEKSMLSKLK ECG FTSKLEGMFKDMELSKDI V FKQ+M
Sbjct: 454 KKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQHMQ 513
Query: 122 N 122
N
Sbjct: 514 N 514
>sp|Q13619|CUL4A_HUMAN Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3
Length = 759
Score = 233 bits (593), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/146 (76%), Positives = 126/146 (86%), Gaps = 2/146 (1%)
Query: 134 ALGIDLTDADLRRTLQSLACGKTRVLKKTPASRDIEDCDRFRFNNDFTFKLFRIKINQIQ 193
A GI+ D++LRRTLQSLACGK RVL K+P +++ED D+F FN +F KLFRIKINQIQ
Sbjct: 616 ATGIE--DSELRRTLQSLACGKARVLIKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQIQ 673
Query: 194 MKETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLKFPVKPADLK 253
MKET EEQ +T ERVFQDRQYQIDAAIVRIMKMRKTL HNLL+SEL+NQLKFPVKP DLK
Sbjct: 674 MKETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPGDLK 733
Query: 254 KRIESLIDRDYMERDKDKANSYNYMA 279
KRIESLIDRDYMERDKD N Y+Y+A
Sbjct: 734 KRIESLIDRDYMERDKDNPNQYHYVA 759
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 54/61 (88%)
Query: 62 KVDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMG 121
K DLAKRLLVGKSASVDAEKSMLSKLK ECG FTSKLEGMFKDMELSKDI V FKQ+M
Sbjct: 454 KKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQHMQ 513
Query: 122 N 122
N
Sbjct: 514 N 514
>sp|Q8LGH4|CUL4_ARATH Cullin-4 OS=Arabidopsis thaliana GN=CUL4 PE=1 SV=1
Length = 792
Score = 213 bits (543), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/141 (70%), Positives = 115/141 (81%)
Query: 139 LTDADLRRTLQSLACGKTRVLKKTPASRDIEDCDRFRFNNDFTFKLFRIKINQIQMKETN 198
+ D +LRRTLQSLACGK RVL+K P RD+ED D F FN++F L+RIK+N IQMKET
Sbjct: 652 IEDKELRRTLQSLACGKVRVLQKNPKGRDVEDGDEFEFNDEFAAPLYRIKVNAIQMKETV 711
Query: 199 EEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLKFPVKPADLKKRIES 258
EE +T ERVFQDRQYQIDAAIVRIMK RK LSH LL++ELF QLKFP+KPADLKKRIES
Sbjct: 712 EENTSTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIES 771
Query: 259 LIDRDYMERDKDKANSYNYMA 279
LIDR+Y+ER+K YNY+A
Sbjct: 772 LIDREYLEREKSNPQIYNYLA 792
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 52/57 (91%)
Query: 62 KVDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQ 118
K DLAKRLL+GKSAS+DAEKSM+SKLK ECG FT+KLEGMFKD+ELSK+IN +FKQ
Sbjct: 486 KKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQ 542
>sp|Q54CS2|CUL4_DICDI Cullin-4 OS=Dictyostelium discoideum GN=culD PE=3 SV=1
Length = 802
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 89/115 (77%)
Query: 165 SRDIEDCDRFRFNNDFTFKLFRIKINQIQMKETNEEQKATEERVFQDRQYQIDAAIVRIM 224
++ I++ D F FN+ F+ KLF+IK+N IQ++ET EE + T E + DRQYQ+DAAIVRIM
Sbjct: 688 TKVIDETDTFLFNSKFSSKLFKIKVNSIQIQETVEENQKTNENIISDRQYQVDAAIVRIM 747
Query: 225 KMRKTLSHNLLLSELFNQLKFPVKPADLKKRIESLIDRDYMERDKDKANSYNYMA 279
K RKTL+HNLL+SEL + LKF KP DLKKRIE LI+++Y+ RD + A YNYMA
Sbjct: 748 KTRKTLAHNLLISELVSLLKFQPKPVDLKKRIEILIEKEYLCRDPENAMIYNYMA 802
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 46/56 (82%)
Query: 62 KVDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFK 117
K DL+KRLL+ KS S+DAEKSM+SKLK ECG FT+KLE MFKD+ELS DI +F+
Sbjct: 463 KQDLSKRLLLDKSTSIDAEKSMISKLKTECGTTFTAKLEEMFKDIELSNDIMNSFR 518
>sp|Q9ZVH4|CUL3A_ARATH Cullin-3A OS=Arabidopsis thaliana GN=CUL3A PE=1 SV=1
Length = 732
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 100/146 (68%), Gaps = 4/146 (2%)
Query: 138 DLTDADLRRTLQSLACGKTR-VLKKTPASRDIEDCDRFRFNNDFTFKLFRIKINQI-QMK 195
++ ADL+R LQSLAC K + V+KK P S+DI + D F N+ FT K +++KI + K
Sbjct: 587 EIPAADLKRCLQSLACVKGKNVIKKEPMSKDIGEEDLFVVNDKFTSKFYKVKIGTVVAQK 646
Query: 196 ETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQL--KFPVKPADLK 253
ET E++ T +RV +DR+ QI+AAIVRIMK RK L HN +++E+ QL +F P ++K
Sbjct: 647 ETEPEKQETRQRVEEDRKPQIEAAIVRIMKSRKILDHNNIIAEVTKQLQPRFLANPTEIK 706
Query: 254 KRIESLIDRDYMERDKDKANSYNYMA 279
KRIESLI+RD++ERD Y Y+A
Sbjct: 707 KRIESLIERDFLERDSTDRKLYRYLA 732
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 40/55 (72%)
Query: 62 KVDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAF 116
K LAKRLL GK+ S DAE+S++ KLK ECG FTSKLEGMF DM+ S+D F
Sbjct: 424 KQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSEDTMRGF 478
>sp|Q13618|CUL3_HUMAN Cullin-3 OS=Homo sapiens GN=CUL3 PE=1 SV=2
Length = 768
Score = 124 bits (311), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 98/148 (66%), Gaps = 6/148 (4%)
Query: 138 DLTDADLRRTLQSLACGKT--RVLKKTPASRDIEDCDRFRFNNDFTFKLFRIKINQIQMK 195
D+ + +L R LQSLACGK RVL K P S++IE+ F N+ FT KL R+KI + K
Sbjct: 621 DIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAK 680
Query: 196 --ETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLK--FPVKPAD 251
E++ E+K T ++V DR+++I+AAIVRIMK RK + HN+L++E+ QLK F P
Sbjct: 681 QGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVV 740
Query: 252 LKKRIESLIDRDYMERDKDKANSYNYMA 279
+KKRIE LI+R+Y+ R + Y Y+A
Sbjct: 741 IKKRIEGLIEREYLARTPEDRKVYTYVA 768
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 14/102 (13%)
Query: 62 KVDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMG 121
K LA+RLL KS S D+EK+M+SKLK ECG FTSKLEGMF+DM +S F+Q++
Sbjct: 433 KQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHL- 491
Query: 122 NLKEDKESTSNNALGIDLTDADLRRTLQSLACGKTRVLKKTP 163
A G+ L DL T++ L G TP
Sbjct: 492 -----------QATGVSLGGVDL--TVRVLTTGYWPTQSATP 520
>sp|Q6GPF3|CUL3B_XENLA Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1
Length = 768
Score = 124 bits (311), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 97/148 (65%), Gaps = 6/148 (4%)
Query: 138 DLTDADLRRTLQSLACGKT--RVLKKTPASRDIEDCDRFRFNNDFTFKLFRIKINQIQMK 195
D+ + +L R LQSLACGK RVL K P S++IE F N+ FT KL R+KI + K
Sbjct: 621 DIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAK 680
Query: 196 --ETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLK--FPVKPAD 251
E++ E+K T ++V DR+++I+AAIVRIMK RK + HN+L++E+ QLK F P
Sbjct: 681 QGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVV 740
Query: 252 LKKRIESLIDRDYMERDKDKANSYNYMA 279
+KKRIE LI+R+Y+ R + Y Y+A
Sbjct: 741 IKKRIEGLIEREYLARTPEDRKVYTYVA 768
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 7/79 (8%)
Query: 62 KVDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMG 121
K LA+RLL KS S D+EK+M+SKLK ECG FTSKLEGMF+DM +S F+Q++
Sbjct: 433 KQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHL- 491
Query: 122 NLKEDKESTSNNALGIDLT 140
++T + G+DLT
Sbjct: 492 ------QTTGVSLGGVDLT 504
>sp|Q6DE95|CUL3A_XENLA Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1
Length = 768
Score = 124 bits (311), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 97/148 (65%), Gaps = 6/148 (4%)
Query: 138 DLTDADLRRTLQSLACGKT--RVLKKTPASRDIEDCDRFRFNNDFTFKLFRIKINQIQMK 195
D+ + +L R LQSLACGK RVL K P S++IE F N+ FT KL R+KI + K
Sbjct: 621 DIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAK 680
Query: 196 --ETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLK--FPVKPAD 251
E++ E+K T ++V DR+++I+AAIVRIMK RK + HN+L++E+ QLK F P
Sbjct: 681 QGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVV 740
Query: 252 LKKRIESLIDRDYMERDKDKANSYNYMA 279
+KKRIE LI+R+Y+ R + Y Y+A
Sbjct: 741 IKKRIEGLIEREYLARTPEDRKVYTYVA 768
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 7/79 (8%)
Query: 62 KVDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMG 121
K LA+RLL KS S D+EK+M+SKLK ECG FTSKLEGMF+DM +S F+Q++
Sbjct: 433 KQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHL- 491
Query: 122 NLKEDKESTSNNALGIDLT 140
++T + G+DLT
Sbjct: 492 ------QTTGVSLGGVDLT 504
>sp|A4IHP4|CUL3_XENTR Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1
Length = 768
Score = 124 bits (311), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 97/148 (65%), Gaps = 6/148 (4%)
Query: 138 DLTDADLRRTLQSLACGKT--RVLKKTPASRDIEDCDRFRFNNDFTFKLFRIKINQIQMK 195
D+ + +L R LQSLACGK RVL K P S++IE F N+ FT KL R+KI + K
Sbjct: 621 DIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAK 680
Query: 196 --ETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLK--FPVKPAD 251
E++ E+K T ++V DR+++I+AAIVRIMK RK + HN+L++E+ QLK F P
Sbjct: 681 QGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVV 740
Query: 252 LKKRIESLIDRDYMERDKDKANSYNYMA 279
+KKRIE LI+R+Y+ R + Y Y+A
Sbjct: 741 IKKRIEGLIEREYLARTPEDRKVYTYVA 768
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 7/79 (8%)
Query: 62 KVDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMG 121
K LA+RLL KS S D+EK+M+SKLK ECG FTSKLEGMF+DM +S F+Q++
Sbjct: 433 KQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHL- 491
Query: 122 NLKEDKESTSNNALGIDLT 140
++T + G+DLT
Sbjct: 492 ------QTTGVSLGGVDLT 504
>sp|Q9JLV5|CUL3_MOUSE Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1
Length = 768
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 97/148 (65%), Gaps = 6/148 (4%)
Query: 138 DLTDADLRRTLQSLACGKT--RVLKKTPASRDIEDCDRFRFNNDFTFKLFRIKINQIQMK 195
D+ + +L R LQSLACGK RVL K P S++IE F N+ FT KL R+KI + K
Sbjct: 621 DIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAK 680
Query: 196 --ETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLK--FPVKPAD 251
E++ E+K T ++V DR+++I+AAIVRIMK RK + HN+L++E+ QLK F P
Sbjct: 681 QGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVV 740
Query: 252 LKKRIESLIDRDYMERDKDKANSYNYMA 279
+KKRIE LI+R+Y+ R + Y Y+A
Sbjct: 741 IKKRIEGLIEREYLARTPEDRKVYTYVA 768
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 14/102 (13%)
Query: 62 KVDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMG 121
K LA+RLL KS S D+EK+M+SKLK ECG FTSKLEGMF+DM +S F+Q++
Sbjct: 433 KQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHL- 491
Query: 122 NLKEDKESTSNNALGIDLTDADLRRTLQSLACGKTRVLKKTP 163
A G+ L DL T++ L G TP
Sbjct: 492 -----------QATGVSLGGVDL--TVRVLTTGYWPTQSATP 520
>sp|B5DF89|CUL3_RAT Cullin-3 OS=Rattus norvegicus GN=Cul3 PE=1 SV=2
Length = 768
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 97/148 (65%), Gaps = 6/148 (4%)
Query: 138 DLTDADLRRTLQSLACGKT--RVLKKTPASRDIEDCDRFRFNNDFTFKLFRIKINQIQMK 195
D+ + +L R LQSLACGK RVL K P S++IE F N+ FT KL R+KI + K
Sbjct: 621 DIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAK 680
Query: 196 --ETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLK--FPVKPAD 251
E++ E+K T ++V DR+++I+AAIVRIMK RK + HN+L++E+ QLK F P
Sbjct: 681 QGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVV 740
Query: 252 LKKRIESLIDRDYMERDKDKANSYNYMA 279
+KKRIE LI+R+Y+ R + Y Y+A
Sbjct: 741 IKKRIEGLIEREYLARTPEDRKVYTYVA 768
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 14/102 (13%)
Query: 62 KVDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMG 121
K LA+RLL KS S D+EK+M+SKLK ECG FTSKLEGMF+DM +S F+Q++
Sbjct: 433 KQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHL- 491
Query: 122 NLKEDKESTSNNALGIDLTDADLRRTLQSLACGKTRVLKKTP 163
A G+ L DL T++ L G TP
Sbjct: 492 -----------QATGVSLGGVDL--TVRVLTTGYWPTQSATP 520
>sp|Q9C9L0|CUL3B_ARATH Cullin-3B OS=Arabidopsis thaliana GN=CUL3B PE=1 SV=1
Length = 732
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 98/146 (67%), Gaps = 4/146 (2%)
Query: 138 DLTDADLRRTLQSLACGKTR-VLKKTPASRDIEDCDRFRFNNDFTFKLFRIKINQI-QMK 195
++ DL+R LQS+AC K + VL+K P S++I + D F N+ F K +++KI + K
Sbjct: 587 EIPTPDLKRCLQSMACVKGKNVLRKEPMSKEIAEEDWFVVNDRFASKFYKVKIGTVVAQK 646
Query: 196 ETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQL--KFPVKPADLK 253
ET E++ T +RV +DR+ QI+AAIVRIMK R+ L HN +++E+ QL +F P ++K
Sbjct: 647 ETEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQTRFLANPTEIK 706
Query: 254 KRIESLIDRDYMERDKDKANSYNYMA 279
KRIESLI+RD++ERD Y Y+A
Sbjct: 707 KRIESLIERDFLERDNTDRKLYRYLA 732
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 62 KVDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAF 116
K LAKRLL GK+ S DAE++++ KLK ECG FTSKLEGMF DM+ S D + F
Sbjct: 424 KQHLAKRLLSGKTVSDDAERNLIVKLKTECGYQFTSKLEGMFTDMKTSHDTLLGF 478
>sp|Q9SRZ0|CUL2_ARATH Cullin-2 OS=Arabidopsis thaliana GN=CUL2 PE=1 SV=1
Length = 742
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 90/145 (62%), Gaps = 6/145 (4%)
Query: 137 IDLTDADLRRTLQSLACGKTRVLKKTPASRDIEDCDRFRFNNDFTFKLFRIKINQIQMKE 196
++L DL R L SL+C K ++L K P SR+I + D F FN+ FT K+ RI++ M
Sbjct: 602 LNLGHEDLARLLHSLSCLKYKILIKEPMSRNISNTDTFEFNSKFTDKMRRIRVPLPPM-- 659
Query: 197 TNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLKFPVKP--ADLKK 254
+E+K E V +DR+Y IDAA+VRIMK RK L H L+SE L KP +KK
Sbjct: 660 --DERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEHLSKMFKPDIKMIKK 717
Query: 255 RIESLIDRDYMERDKDKANSYNYMA 279
RIE LI RDY+ERD D N++ Y+A
Sbjct: 718 RIEDLISRDYLERDTDNPNTFKYLA 742
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 66 AKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMGNLKE 125
A+RLL ++ + E+S+L+K K+ G FTSK+EGM DM L+K+ F +++ K
Sbjct: 442 ARRLLFDRNGNDYHERSLLTKFKELLGAQFTSKMEGMLTDMTLAKEHQTNFVEFLSVNKT 501
Query: 126 DKESTSNNALGIDLT 140
K LG+D T
Sbjct: 502 KK-------LGMDFT 509
>sp|Q09760|CUL3_SCHPO Cullin-3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul3 PE=1 SV=2
Length = 785
Score = 118 bits (295), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 90/142 (63%), Gaps = 4/142 (2%)
Query: 142 ADLRRTLQSLACGKTRVLKKTPASRDIEDCDRFRFNNDFTFKLFRIKINQIQMK--ETNE 199
DL+R LQSLAC K ++L K P R++ D+F FN +F L RIKI+ + E +
Sbjct: 644 GDLKRNLQSLACAKYKILLKDPKGREVNAGDKFYFNENFVSNLARIKISTVAQTRVEDDS 703
Query: 200 EQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQL--KFPVKPADLKKRIE 257
E+K T E+V + R++Q DA IVR+MK RK HN L++E+ QL +F P +K+RIE
Sbjct: 704 ERKRTLEKVDESRKHQADACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHPSPMMIKRRIE 763
Query: 258 SLIDRDYMERDKDKANSYNYMA 279
+LI+R+Y++R D Y Y+A
Sbjct: 764 ALIEREYLQRQADNGRIYEYLA 785
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 39/57 (68%)
Query: 62 KVDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQ 118
K LAKRLL +S S DAE M+S+LKQE G FT KLEGMF DM LS+++ +K
Sbjct: 470 KTHLAKRLLNNRSISSDAELGMISRLKQEAGNVFTQKLEGMFNDMNLSQELLQEYKH 526
>sp|P0CH31|CLL1_ARATH Putative cullin-like protein 1 OS=Arabidopsis thaliana GN=At1g43140
PE=3 SV=1
Length = 721
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 92/145 (63%), Gaps = 6/145 (4%)
Query: 137 IDLTDADLRRTLQSLACGKTRVLKKTPASRDIEDCDRFRFNNDFTFKLFRIKINQIQMKE 196
++L+ DL R L SL+C K ++L K P SR I D F FN+ FT K+ +I++ M
Sbjct: 581 LNLSHEDLVRLLHSLSCLKYKILIKEPMSRTISKTDTFEFNSKFTDKMRKIRVPLPPM-- 638
Query: 197 TNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLKFPVKP--ADLKK 254
+E+K E V +DR+Y IDAA+VRIMK RK L+H L+SE L KP +KK
Sbjct: 639 --DERKKVVEDVDKDRRYAIDAALVRIMKSRKVLAHQQLVSECVEHLSKMFKPDIKMIKK 696
Query: 255 RIESLIDRDYMERDKDKANSYNYMA 279
RIE LI+RDY+ERD + AN++ Y+A
Sbjct: 697 RIEDLINRDYLERDTENANTFKYVA 721
>sp|Q94AH6|CUL1_ARATH Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1
Length = 738
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 95/156 (60%), Gaps = 6/156 (3%)
Query: 126 DKESTSNNALGIDLTDADLRRTLQSLACGKTRVLKKTPASRDIEDCDRFRFNNDFTFKLF 185
DK S + ++L+ DL R L SL+C K ++L K P ++ + D F FN+ FT ++
Sbjct: 587 DKLSYTEILAQLNLSHEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEFNSKFTDRMR 646
Query: 186 RIKINQIQMKETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLKF 245
RIKI + +E +K E+ V +DR+Y IDAAIVRIMK RK L H L+SE QL
Sbjct: 647 RIKI---PLPPVDERKKVVED-VDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSR 702
Query: 246 PVKP--ADLKKRIESLIDRDYMERDKDKANSYNYMA 279
KP +KKR+E LI RDY+ERDK+ N + Y+A
Sbjct: 703 MFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 738
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 11/78 (14%)
Query: 65 LAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMGNLK 124
LA+RLL +SA+ D E+S+L+KLKQ+CGG FTSK+EGM D+ L+++ +F+ Y+G
Sbjct: 437 LARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQNSFEDYLG--- 493
Query: 125 EDKESTSNNAL--GIDLT 140
SN A GIDLT
Sbjct: 494 ------SNPAANPGIDLT 505
>sp|Q54NZ5|CUL3_DICDI Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1
Length = 769
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 81/116 (69%), Gaps = 2/116 (1%)
Query: 166 RDIEDCDRFRFNNDFTFKLFRIKINQIQMKETNEEQKATEERVFQDRQYQIDAAIVRIMK 225
+ I++ D F FN F KLFR+K+ + KET E+K T ++V +DR++QI+A+IVRIMK
Sbjct: 654 KSIDESDVFAFNTKFKSKLFRVKVMAVVQKETPVEEKETRDKVDEDRKHQIEASIVRIMK 713
Query: 226 MRKTLSHNLLLSELFNQL--KFPVKPADLKKRIESLIDRDYMERDKDKANSYNYMA 279
RKTL H+ L+SE+ QL +F P +KKRIESLI+R+Y+ER K YNYMA
Sbjct: 714 ARKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRIESLIEREYLERSKQDRKIYNYMA 769
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 54/78 (69%), Gaps = 8/78 (10%)
Query: 62 KVDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMG 121
K LAKRLL+G+S S DAE++M++KLK ECG FTSKLEGMF DM LS+D FK Y+
Sbjct: 428 KQHLAKRLLLGRSISDDAERNMIAKLKTECGYQFTSKLEGMFTDMRLSQDTMSGFKTYIQ 487
Query: 122 NLKEDKESTSNNALGIDL 139
NLK+ AL IDL
Sbjct: 488 NLKK--------ALPIDL 497
>sp|Q17392|CUL4_CAEEL Cullin-4 OS=Caenorhabditis elegans GN=cul-4 PE=1 SV=3
Length = 840
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 81/108 (75%)
Query: 172 DRFRFNNDFTFKLFRIKINQIQMKETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLS 231
++F N+ FT K R++I Q+ +K EE K +E V DRQY+IDAA+VRIMK RK L+
Sbjct: 733 EKFVVNSKFTEKRCRVRIAQVNIKTAVEETKEVKEEVNSDRQYKIDAAVVRIMKARKQLN 792
Query: 232 HNLLLSELFNQLKFPVKPADLKKRIESLIDRDYMERDKDKANSYNYMA 279
H L++EL QL+FPV AD+KKR+ESLI+R+Y+ RD ++A+SYNY+A
Sbjct: 793 HQTLMTELLQQLRFPVSTADIKKRLESLIEREYISRDPEEASSYNYVA 840
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 47/63 (74%)
Query: 65 LAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMGNLK 124
LAKRL + +SASVDAEK +L KLK ECG FT KLEGMFKDM+ S++ F QY+ ++
Sbjct: 528 LAKRLFLERSASVDAEKMVLCKLKTECGSAFTYKLEGMFKDMDASENYGRLFNQYLEHMN 587
Query: 125 EDK 127
++K
Sbjct: 588 KEK 590
>sp|O14122|CUL4_SCHPO Cullin-4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul4 PE=1 SV=1
Length = 734
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 93/158 (58%), Gaps = 14/158 (8%)
Query: 132 NNALG------------IDLTDADLRRTLQSLACGKTRVLKKTPASRDIEDCDRFRFNND 179
NN LG +L+D DL RTLQSL+C + R L P S+ F N
Sbjct: 575 NNCLGGEGISYQDLKKSTELSDIDLTRTLQSLSCARIRPLVMVPKSKKPSPDTMFYVNEK 634
Query: 180 FTFKLFRIKINQIQMKETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSEL 239
FT KL+R+KINQI +KE +E +E+V +DRQ+++ A+IVR+MK ++ + H+ L+ +
Sbjct: 635 FTDKLYRVKINQIYLKEERQENSDVQEQVVRDRQFELQASIVRVMKQKEKMKHDDLVQYV 694
Query: 240 FNQLKFPVKP--ADLKKRIESLIDRDYMERDKDKANSY 275
N +K P +D+K IE L++++Y+ER+ + +Y
Sbjct: 695 INNVKDRGIPLVSDVKTAIEKLLEKEYLEREDNDIYTY 732
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 62 KVDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQ 118
K+D+AKRLL+ KSAS E +L LK+ CG FT LEGMF+D+ +SK+ +F+
Sbjct: 428 KLDIAKRLLLNKSASAQNELMLLDMLKKTCGSQFTHSLEGMFRDVNISKEFTSSFRH 484
>sp|Q17391|CUL3_CAEEL Cullin-3 OS=Caenorhabditis elegans GN=cul-3 PE=1 SV=2
Length = 777
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 96/149 (64%), Gaps = 6/149 (4%)
Query: 137 IDLTDADLRRTLQSLACGKT--RVLKKTPASRD-IEDCDRFRFNNDFTFKLFRIKINQIQ 193
+ + + +L+R LQSLA GK R+L + +D I+ D F N++F KL R+K+ +
Sbjct: 629 LKIPERELKRNLQSLALGKASQRILVRKNKGKDAIDMSDEFAVNDNFQSKLTRVKVQMVT 688
Query: 194 MK-ETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQL--KFPVKPA 250
K E+ E + T ++V DR+ +++AAIVRIMK RK L+HN L++E+ QL +F P
Sbjct: 689 GKVESEPEIRETRQKVEDDRKLEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPI 748
Query: 251 DLKKRIESLIDRDYMERDKDKANSYNYMA 279
+K+RIE+LI+R+Y+ RD+ +Y Y+A
Sbjct: 749 IIKQRIETLIEREYLARDEHDHRAYQYIA 777
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%)
Query: 65 LAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQY 119
LAKRLL+ KS S D EK++L+KLK ECG FT KLE MF+D EL + +F+ +
Sbjct: 442 LAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMFRDKELWLTLATSFRDW 496
>sp|O60999|CUL1_DICDI Cullin-1 OS=Dictyostelium discoideum GN=culA PE=1 SV=1
Length = 770
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 6/145 (4%)
Query: 139 LTDADLRRTLQSLACGKTRVLKKTPASRD--IEDCDRFRFNNDFTFKLFRIKINQIQMKE 196
L D+ L+ TL SLA K+++L P D I +F N F K +I IN + +
Sbjct: 628 LIDSVLKGTLTSLA--KSKILLADPPLDDEEIAKTTKFSLNKQFKNKKTKIFINVPVLTQ 685
Query: 197 TNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQL--KFPVKPADLKK 254
EE + + V +DR+ QI AAIVRIMKMRK L+H+ L++E+ +QL +F K +KK
Sbjct: 686 VKEEIDSIHKTVEEDRKLQIQAAIVRIMKMRKQLAHSGLMTEVISQLQTRFNPKVNIIKK 745
Query: 255 RIESLIDRDYMERDKDKANSYNYMA 279
I+ LI+++Y+ R + K + Y+Y+A
Sbjct: 746 CIDILIEKEYLMRVEGKKDHYSYVA 770
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 65 LAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMGNLK 124
LAKRL+ G S S D E +M+ KLK CG +TSKL+ MF DM LS+++ F ++
Sbjct: 461 LAKRLIHGTSTSEDLEGTMIGKLKSTCGYEYTSKLQRMFTDMSLSRELLDRFNNHI---- 516
Query: 125 EDKESTSNNALGIDLT 140
E ++L ID +
Sbjct: 517 ---EQVERSSLNIDFS 529
>sp|Q5RCF3|CUL2_PONAB Cullin-2 OS=Pongo abelii GN=CUL2 PE=2 SV=1
Length = 745
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 81/143 (56%), Gaps = 4/143 (2%)
Query: 139 LTDADLRRTLQSLACGKTRVLKKTPASRDIEDCDRFRFNNDFTFKLFRIKINQIQMKETN 198
+ + +L +T++SL +++ DI+ F N +F+ K + KI K+T
Sbjct: 605 MNEKELTKTIKSLL--DVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTP 662
Query: 199 EEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLKFPVKPAD--LKKRI 256
+E + T V +DR+ + AAIVRIMK RK L HN L+ E+ +Q + P+ +KK I
Sbjct: 663 QEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCI 722
Query: 257 ESLIDRDYMERDKDKANSYNYMA 279
E LID+ Y+ER + A+ Y+Y+A
Sbjct: 723 EVLIDKQYIERSQASADEYSYVA 745
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 65 LAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDI 112
LAKRL+ G S S+D+E++M++KLKQ CG FTSKL M+ DM +S D+
Sbjct: 439 LAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADL 486
>sp|Q13617|CUL2_HUMAN Cullin-2 OS=Homo sapiens GN=CUL2 PE=1 SV=2
Length = 745
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 81/143 (56%), Gaps = 4/143 (2%)
Query: 139 LTDADLRRTLQSLACGKTRVLKKTPASRDIEDCDRFRFNNDFTFKLFRIKINQIQMKETN 198
+ + +L +T++SL +++ DI+ F N +F+ K + KI K+T
Sbjct: 605 MNEKELTKTIKSLL--DVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTP 662
Query: 199 EEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLKFPVKPAD--LKKRI 256
+E + T V +DR+ + AAIVRIMK RK L HN L+ E+ +Q + P+ +KK I
Sbjct: 663 QEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCI 722
Query: 257 ESLIDRDYMERDKDKANSYNYMA 279
E LID+ Y+ER + A+ Y+Y+A
Sbjct: 723 EVLIDKQYIERSQASADEYSYVA 745
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 65 LAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDI 112
LAKRL+ G S S+D+E++M++KLKQ CG FTSKL M+ DM +S D+
Sbjct: 439 LAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADL 486
>sp|Q9D4H8|CUL2_MOUSE Cullin-2 OS=Mus musculus GN=Cul2 PE=1 SV=2
Length = 745
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Query: 139 LTDADLRRTLQSLACGKTRVLKKTPASRDIEDCDRFRFNNDFTFKLFRIKINQIQMKETN 198
+ + +L +T++SL +++ DI+ F N F+ K + KI K+T
Sbjct: 605 MNEKELTKTIKSLL--DVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSMQKDTP 662
Query: 199 EEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLKFPVKPAD--LKKRI 256
+E + T V +DR+ + AAIVRIMK RK L HN L+ E+ +Q + P+ +KK I
Sbjct: 663 QELEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCI 722
Query: 257 ESLIDRDYMERDKDKANSYNYMA 279
E LID+ Y+ER + A+ Y+Y+A
Sbjct: 723 EVLIDKQYIERSQASADEYSYVA 745
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 65 LAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMGN 122
LAKRL+ G S S+D+E++M++KLKQ CG FTSKL M+ DM +S D+N F ++ N
Sbjct: 439 LAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIRN 496
>sp|Q24311|CUL1_DROME Cullin homolog 1 OS=Drosophila melanogaster GN=lin19 PE=1 SV=2
Length = 774
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
Query: 179 DFTFKLFRIKINQIQMKETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSE 238
D+ K RI INQ E EQ+ + + +DR+ I AAIVRIMKMRK L+H L+SE
Sbjct: 672 DYKNKKRRININQPLKTELKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISE 731
Query: 239 LFNQL--KFPVKPADLKKRIESLIDRDYMERDKDKANSYNYMA 279
+ NQL +F K +KK I+ LI+++Y+ER + ++Y+Y+A
Sbjct: 732 VLNQLSTRFKPKVPVIKKCIDILIEKEYLERMEGHKDTYSYLA 774
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 65 LAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMG 121
LAKRL+ SAS DAE M+SKLKQ CG +T KL+ MF+D+ +SKD+N FKQY+
Sbjct: 469 LAKRLVNHTSASDDAEAMMISKLKQTCGYEYTVKLQRMFQDIGVSKDLNSYFKQYLA 525
>sp|Q5R4G6|CUL1_PONAB Cullin-1 OS=Pongo abelii GN=CUL1 PE=2 SV=1
Length = 776
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 76/146 (52%), Gaps = 15/146 (10%)
Query: 144 LRRTLQSLACGKTRVLKKTPASRDIEDCDRFRFNNDFTFKLF--------RIKINQIQMK 195
L + LQ L K VL+ A + D D KL+ R+ IN
Sbjct: 636 LAQVLQILLKSKLLVLEDENA-----NVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKT 690
Query: 196 ETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLKFPVKP--ADLK 253
E +EQ+ T + + +DR+ I AAIVRIMKMRK L H LL E+ QL KP +K
Sbjct: 691 EQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIK 750
Query: 254 KRIESLIDRDYMERDKDKANSYNYMA 279
K I+ LI+++Y+ER + ++Y+Y+A
Sbjct: 751 KCIDILIEKEYLERVDGEKDTYSYLA 776
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 65 LAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMGN 122
LAKRL+ SAS DAE SM+SKLKQ CG +TSKL+ MF+D+ +SKD+N FK+++ N
Sbjct: 470 LAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTN 527
>sp|Q13616|CUL1_HUMAN Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2
Length = 776
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 76/146 (52%), Gaps = 15/146 (10%)
Query: 144 LRRTLQSLACGKTRVLKKTPASRDIEDCDRFRFNNDFTFKLF--------RIKINQIQMK 195
L + LQ L K VL+ A + D D KL+ R+ IN
Sbjct: 636 LAQVLQILLKSKLLVLEDENA-----NVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKT 690
Query: 196 ETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLKFPVKP--ADLK 253
E +EQ+ T + + +DR+ I AAIVRIMKMRK L H LL E+ QL KP +K
Sbjct: 691 EQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIK 750
Query: 254 KRIESLIDRDYMERDKDKANSYNYMA 279
K I+ LI+++Y+ER + ++Y+Y+A
Sbjct: 751 KCIDILIEKEYLERVDGEKDTYSYLA 776
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 65 LAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMGN 122
LAKRL+ SAS DAE SM+SKLKQ CG +TSKL+ MF+D+ +SKD+N FK+++ N
Sbjct: 470 LAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTN 527
>sp|Q9WTX6|CUL1_MOUSE Cullin-1 OS=Mus musculus GN=Cul1 PE=1 SV=1
Length = 776
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 76/146 (52%), Gaps = 15/146 (10%)
Query: 144 LRRTLQSLACGKTRVLKKTPASRDIEDCDRFRFNNDFTFKLF--------RIKINQIQMK 195
L + LQ L K VL+ A + D D KL+ R+ IN
Sbjct: 636 LAQVLQILLKSKLLVLEDENA-----NVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKT 690
Query: 196 ETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLKFPVKP--ADLK 253
E +EQ+ T + + +DR+ I AAIVRIMKMRK L H LL E+ QL KP +K
Sbjct: 691 EQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIK 750
Query: 254 KRIESLIDRDYMERDKDKANSYNYMA 279
K I+ LI+++Y+ER + ++Y+Y+A
Sbjct: 751 KCIDILIEKEYLERVDGEKDTYSYLA 776
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 65 LAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMGN 122
LAKRL+ SAS DAE SM+SKLKQ CG +TSKL+ MF+D+ +SKD+N FK+++ N
Sbjct: 470 LAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTN 527
>sp|Q54XF7|CUL5_DICDI Cullin-5 OS=Dictyostelium discoideum GN=culE PE=3 SV=1
Length = 750
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 90/158 (56%), Gaps = 14/158 (8%)
Query: 132 NNALGIDLTDADLRRTLQSLACGKTRVLKKT-PASRDIEDCDRFRFNNDFTFKLFRIKIN 190
N+ +G+D + +R L LA KT +++ + P+ ++ + F N+ F+ K ++ N
Sbjct: 597 NDTIGLD--ETSIRLPL--LALIKTGIIECSEPSFKNWNNDTEFTVNSKFSSKKMKVSCN 652
Query: 191 -QIQMKETNE---EQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLK-- 244
+Q+ ET + +Q +E+ + ++R +++ AAIVRIMK +KT++HN L E Q+
Sbjct: 653 IAVQIGETKQSEGQQTVSEQEIEKERFFKLQAAIVRIMKSKKTMTHNDLTVETTTQVSKW 712
Query: 245 FPVKPADLKKRIESLIDRDYMER---DKDKANSYNYMA 279
F K +KK IE LID++Y+ R D A Y YMA
Sbjct: 713 FTPKITAIKKAIEYLIDQEYIRRTTDDNPSARKYEYMA 750
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 65 LAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMG 121
L+KRL+ SAS DAE M++KLK G + +KL M DM L KDIN+ F+ ++
Sbjct: 436 LSKRLVEDLSASEDAETLMINKLKNYQGFDYCTKLTRMITDMRLCKDININFQNHLN 492
>sp|Q17390|CUL2_CAEEL Cullin-2 OS=Caenorhabditis elegans GN=cul-2 PE=1 SV=3
Length = 850
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 185 FRIKINQIQMKETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLK 244
FR++ Q+ K +EQ+A V QDR+Y ++ AIVRIMK RK L HN L++E+ +Q K
Sbjct: 756 FRLQAPQVN-KAVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQTK 814
Query: 245 FPVKP--ADLKKRIESLIDRDYMERDKDKANSYNYMA 279
P +KK IE LI++ Y++R D+ + Y Y+A
Sbjct: 815 GRFSPDVPFIKKSIEDLIEKMYIQR-TDQNDEYQYLA 850
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%)
Query: 65 LAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYMGNLK 124
LA RL+ S S+DAE+ M++KLKQ CG FTSKL MF D+ LS++++ F +++ ++K
Sbjct: 532 LANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELSNNFDKHIADIK 591
>sp|Q9JJ31|CUL5_RAT Cullin-5 OS=Rattus norvegicus GN=Cul5 PE=1 SV=3
Length = 780
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 89/169 (52%), Gaps = 15/169 (8%)
Query: 126 DKESTSNNALGIDLTDADLRRTLQSLACG---KTRVLKKTP---ASRDIEDCDRFRFNND 179
+K S N L +L DA+LRRTL SL K +VL P + +D + F N D
Sbjct: 612 EKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQD 671
Query: 180 FTF-----KLFRIKINQI-QMKETNEEQKATE-ERVFQDRQYQIDAAIVRIMKMRKTLSH 232
F+ R KIN I +++ T E + E E + Q R + AI++IMKMRK +S+
Sbjct: 672 FSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISN 731
Query: 233 NLLLSELFNQLK--FPVKPADLKKRIESLIDRDYMERDKDKANSYNYMA 279
L +EL LK F + +K++IE LI+ Y+ RD+ N++ YMA
Sbjct: 732 AQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINTFIYMA 780
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 61 EKVDLAKRLLVGKSASVDAEKSMLSKLKQECG--GGFTSKLEGMFKDMELSKDINVAFKQ 118
K L +RL++ SA + E++M+ L+ E G + +KL MF+D+++S+D+N AFK+
Sbjct: 454 HKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQDIKVSEDLNQAFKE 512
Query: 119 YMGN 122
N
Sbjct: 513 MHKN 516
>sp|Q93034|CUL5_HUMAN Cullin-5 OS=Homo sapiens GN=CUL5 PE=1 SV=4
Length = 780
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 89/169 (52%), Gaps = 15/169 (8%)
Query: 126 DKESTSNNALGIDLTDADLRRTLQSLACG---KTRVLKKTP---ASRDIEDCDRFRFNND 179
+K S N L +L DA+LRRTL SL K +VL P + +D + F N +
Sbjct: 612 EKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQE 671
Query: 180 FTF-----KLFRIKINQI-QMKETNEEQKATE-ERVFQDRQYQIDAAIVRIMKMRKTLSH 232
F+ R KIN I +++ T E + E E + Q R + AI++IMKMRK +S+
Sbjct: 672 FSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISN 731
Query: 233 NLLLSELFNQLK--FPVKPADLKKRIESLIDRDYMERDKDKANSYNYMA 279
L +EL LK F + +K++IE LI+ Y+ RD+ N++ YMA
Sbjct: 732 AQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 61 EKVDLAKRLLVGKSASVDAEKSMLSKLKQECG--GGFTSKLEGMFKDMELSKDINVAFKQ 118
K L +RL++ SA + E++M+ L+ E G + +KL MF+D+++S+D+N AFK+
Sbjct: 454 HKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQDIKVSEDLNQAFKE 512
Query: 119 YMGN 122
N
Sbjct: 513 MHKN 516
>sp|Q5RB36|CUL5_PONAB Cullin-5 OS=Pongo abelii GN=CUL5 PE=2 SV=3
Length = 780
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 89/169 (52%), Gaps = 15/169 (8%)
Query: 126 DKESTSNNALGIDLTDADLRRTLQSLACG---KTRVLKKTP---ASRDIEDCDRFRFNND 179
+K S N L +L DA+LRRTL SL K +VL P + +D + F N +
Sbjct: 612 EKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQE 671
Query: 180 FTF-----KLFRIKINQI-QMKETNEEQKATE-ERVFQDRQYQIDAAIVRIMKMRKTLSH 232
F+ R KIN I +++ T E + E E + Q R + AI++IMKMRK +S+
Sbjct: 672 FSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISN 731
Query: 233 NLLLSELFNQLK--FPVKPADLKKRIESLIDRDYMERDKDKANSYNYMA 279
L +EL LK F + +K++IE LI+ Y+ RD+ N++ YMA
Sbjct: 732 AQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 61 EKVDLAKRLLVGKSASVDAEKSMLSKLKQECG--GGFTSKLEGMFKDMELSKDINVAFKQ 118
K L +RL++ SA + E++M+ L+ E G + +KL MF+D+++S+D+N AFK+
Sbjct: 454 HKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQDIKVSEDLNQAFKE 512
Query: 119 YMGN 122
N
Sbjct: 513 MHKN 516
>sp|Q9D5V5|CUL5_MOUSE Cullin-5 OS=Mus musculus GN=Cul5 PE=1 SV=3
Length = 780
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 89/169 (52%), Gaps = 15/169 (8%)
Query: 126 DKESTSNNALGIDLTDADLRRTLQSLACG---KTRVLKKTP---ASRDIEDCDRFRFNND 179
+K S N L +L DA+LRRTL SL K +VL P + +D + F N D
Sbjct: 612 EKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQD 671
Query: 180 FTF-----KLFRIKINQI-QMKETNEEQKATE-ERVFQDRQYQIDAAIVRIMKMRKTLSH 232
F+ R KIN I +++ T E + E E + Q R + AI++IMKMRK +S+
Sbjct: 672 FSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISN 731
Query: 233 NLLLSELFNQLK--FPVKPADLKKRIESLIDRDYMERDKDKANSYNYMA 279
L +EL LK F + +K+++E LI+ Y+ RD+ N++ YMA
Sbjct: 732 AQLQTELVEILKNMFLPQKKMIKEQMEWLIEHRYIRRDEADINTFIYMA 780
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 61 EKVDLAKRLLVGKSASVDAEKSMLSKLKQECG--GGFTSKLEGMFKDMELSKDINVAFKQ 118
K L +RL++ SA + E++M+ L+ E G + +KL MF+D+++S+D+N AFK+
Sbjct: 454 HKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQDIKVSEDLNQAFKE 512
Query: 119 YMGN 122
N
Sbjct: 513 MHKN 516
>sp|Q21346|CUL6_CAEEL Cullin-6 OS=Caenorhabditis elegans GN=cul-6 PE=1 SV=1
Length = 729
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 192 IQMKETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLKFPVKP-- 249
I+ + E A + V DR+Y+I A IVRIMK RK+L+H LL++E+ +QLK P
Sbjct: 640 IKKATADRETDAVQNTVESDRKYEIKACIVRIMKTRKSLTHTLLINEIISQLKSRFTPNV 699
Query: 250 ADLKKRIESLIDRDYMERDKDKANSYNYMA 279
+K IE LI++ Y+ R +++ N Y Y+A
Sbjct: 700 QMIKICIEILIEQLYIRRSENEHNVYEYLA 729
Score = 34.7 bits (78), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 65 LAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFK 117
++R++ SAS DAE+ ++ L G +T L M +D ++SKD+ FK
Sbjct: 426 FSERIINNSSASDDAEEKFITNLTATEGLEYTRNLVKMVEDAKISKDLTTEFK 478
>sp|O13790|CUL1_SCHPO Cullin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul1 PE=1 SV=1
Length = 767
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 65 LAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQ 118
LAKRL+ G S S DAE SMLSKLK+ CG +TSKL+ MF+D+ LS++I AF Q
Sbjct: 465 LAKRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQRMFQDISLSQEITEAFWQ 518
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 66/108 (61%), Gaps = 4/108 (3%)
Query: 174 FRFNNDFTFKLFRIKINQIQMKETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHN 233
++ N +F K R+++N E +E T + + +DR+ + +AIVRIMK R+TL H
Sbjct: 662 YKINENFRMKKIRVQLNLPIRSEQKQESLETHKTIEEDRKLLLQSAIVRIMKARRTLKHV 721
Query: 234 LLLSELFNQLK--FPVKPADLKKRIESLIDRDYMERDKDKANSYNYMA 279
+L+ E +Q+K F K +D+K+ I+ LI+++Y+ER + Y Y+A
Sbjct: 722 VLVKETIDQIKSRFTPKVSDIKQCIDMLIEKEYLER--QGRDEYIYLA 767
>sp|Q29425|CUL5_RABIT Cullin-5 OS=Oryctolagus cuniculus GN=CUL5 PE=2 SV=3
Length = 780
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 126 DKESTSNNALGIDLTDADLRRTLQSLACG---KTRVLKKTP---ASRDIEDCDRFRFNND 179
+K S N L +L DA+LRRTL SL K +VL P + +D + F N +
Sbjct: 612 EKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQE 671
Query: 180 FTF-----KLFRIKINQI-QMKETNEEQKATE-ERVFQDRQYQIDAAIVRIMKMRKTLSH 232
F+ R KIN I +++ T E + E E + Q R + ++IMKMRK +S+
Sbjct: 672 FSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTRKLYIQIMKMRKKISN 731
Query: 233 NLLLSELFNQLK--FPVKPADLKKRIESLIDRDYMERDKDKANSYNYMA 279
L +EL LK F + +K++IE LI+ Y+ RD+ N++ YMA
Sbjct: 732 AQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 61 EKVDLAKRLLVGKSASVDAEKSMLSKLKQECG--GGFTSKLEGMFKDMELSKDINVAFKQ 118
K L +RL++ SA + E++M+ L+ E G + +KL MF+D+++S+D+N AFK+
Sbjct: 454 HKAHLTRRLILDISADSEIEENMVEWLR-EVGMPADYVNKLARMFQDIKVSEDLNQAFKE 512
Query: 119 YMGN 122
N
Sbjct: 513 MHKN 516
>sp|Q23639|CUL5_CAEEL Cullin-5 OS=Caenorhabditis elegans GN=cul-5 PE=1 SV=2
Length = 765
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 82/172 (47%), Gaps = 17/172 (9%)
Query: 125 EDKESTSNNALGIDLTDADLRRTLQSL-ACGKTR-------VLKKTPASRDIEDCDRFRF 176
DK S L +L DA+L RTL SL A K R V T +RD D +F
Sbjct: 594 HDKISLETLRLATELPDAELNRTLLSLVAYPKMRYQILLCDVPSTTVTARDFTDSTKFLI 653
Query: 177 NNDFTF-----KLFRIKINQIQMKETNEEQKATEER--VFQDRQYQIDAAIVRIMKMRKT 229
N+DF R K+N I + + E A +E + R+ ++ IV+I+K RKT
Sbjct: 654 NHDFNVVKNGKSQQRGKVNLIGRLQLSLEANAEKEHESIVALRELRVQEGIVKILKTRKT 713
Query: 230 LSHNLLLSELFNQLKFPVKPAD--LKKRIESLIDRDYMERDKDKANSYNYMA 279
+ L EL LK P +K++I+ LI+ YMER D N++ Y++
Sbjct: 714 YTLAQLTMELVEILKPLFIPNRKIIKEQIDWLIENKYMERRADDINTFVYIS 765
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 61 EKVDLAKRLLVGKSASVDAEKSMLSKLKQECG--GGFTSKLEGMFKDMELSKDINVAFKQ 118
+ L++RL++ SA + E+ M++KL+ ECG +KL M +D+EL+KD+N +FK+
Sbjct: 434 HRAHLSRRLILEMSADQEKEEMMVTKLR-ECGMPSDAVNKLSRMLQDIELNKDMNSSFKK 492
Query: 119 YMGNLKEDK 127
+ +K
Sbjct: 493 ALTGTNNNK 501
>sp|Q17389|CUL1_CAEEL Cullin-1 OS=Caenorhabditis elegans GN=cul-1 PE=1 SV=1
Length = 780
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 11/111 (9%)
Query: 176 FNNDFTFKLFRIKINQIQMKE-----TNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTL 230
N + K R+ +++ MK+ T QK EE DR+ I A IVRIMK RK +
Sbjct: 674 LNKAYMNKKVRVDLSKFTMKQDAVRDTENVQKNVEE----DRKSVISACIVRIMKTRKRV 729
Query: 231 SHNLLLSELFNQL--KFPVKPADLKKRIESLIDRDYMERDKDKANSYNYMA 279
H L++E+ QL +F K +K+ I SLI+++YM R + + + Y Y+A
Sbjct: 730 QHQQLMTEVITQLSGRFKPKVEMIKRCIGSLIEKEYMLRTEGQKDLYEYLA 780
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 65 LAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQ 118
+KRL+ SAS +AE + ++KLK CG +T++L M D ++SKD+ FK+
Sbjct: 474 FSKRLISELSASDEAEANFITKLKSMCGYEYTARLSKMVNDTQVSKDLTADFKE 527
>sp|Q9XZJ3|CUL2_DICDI Cullin-2 OS=Dictyostelium discoideum GN=culB PE=2 SV=1
Length = 771
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 174 FRFNNDFTFKLFRIKINQIQMKETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHN 233
+ N+ ++ K ++K++ KET + + T + + +DR+ + A+IVRIMK RKT++H
Sbjct: 664 YTVNSAYSNKRSKVKVSSSLQKETPLQNEETYKGIDEDRKLYLQASIVRIMKARKTMNHV 723
Query: 234 LLLSELF--NQLKFPVKPADLKKRIESLIDRDYMERDKDKANSYNYMA 279
L+ E+ ++L+F +KK IE LI+++Y+ R + +++ Y Y A
Sbjct: 724 SLIQEVIEHSRLRFQPNIPMIKKCIEQLIEKEYITRAEGESDRYLYAA 771
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 65 LAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQYM 120
L++RL+ G S S D EK M++ LKQ CG +TSK + MF D+ LS + N FK ++
Sbjct: 433 LSRRLINGTSVSDDIEKFMITGLKQACGFEYTSKFQRMFNDITLSAETNEEFKNHL 488
>sp|Q12018|CDC53_YEAST Cell division control protein 53 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC53 PE=1 SV=1
Length = 815
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 190 NQIQMKETNEEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQ--LKFPV 247
N++ K E+++ E+ + +RQ ++A IVRIMK ++ L H L++E Q +F
Sbjct: 726 NKLGNKRLTEDER-IEKELNTERQIFLEACIVRIMKAKRNLPHTTLVNECIAQSHQRFNA 784
Query: 248 KPADLKKRIESLIDRDYMERDKDKANSYNYMA 279
K + +K+ I+SLI + Y++R D SY Y+A
Sbjct: 785 KVSMVKRAIDSLIQKGYLQRG-DDGESYAYLA 815
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 65 LAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSK----DINVAFK 117
AKRL+ G S S + E++++ +L+ +T K+ MF+D+ LSK D VA K
Sbjct: 485 FAKRLIHGTSTSAEDEENIIQRLQAANSMEYTGKITKMFQDIRLSKILEDDFAVALK 541
>sp|P53202|CUL3_YEAST Cullin-3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=CUL3 PE=1 SV=1
Length = 744
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 215 QIDAAIVRIMKMRKTLSHNLLLSELF--NQLKFPVKPADLKKRIESLIDRDYMERDKDKA 272
++ A IVRIMK LSH LL Q + + P+ LK+ I+ LI+++Y++R+ D
Sbjct: 678 ELSAIIVRIMKTEGKLSHQQLLERTTKRTQSRLSLTPSILKRSIQLLIEKEYIQRNADDP 737
Query: 273 NSYNYMA 279
+ Y+Y++
Sbjct: 738 SYYHYLS 744
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 60 VEKVDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDINVAFKQ 118
+ K L++RLL +S V+ EK M+ +K+ G FTSKLE M +D+ LS ++ AF+
Sbjct: 432 IYKKQLSRRLLQQRSL-VEIEKWMVQMIKKVLGTFFTSKLEIMLRDISLSSEMYQAFQH 489
>sp|Q9HE02|SSN2_SCHPO Mediator of RNA polymerase II transcription subunit 13
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=srb9 PE=1 SV=2
Length = 1225
Score = 31.6 bits (70), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 199 EEQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLLSELFNQLKFPVKPADLKKRIES 258
E + +VF Y + ++R SH L L ++ PV P D K+I +
Sbjct: 1086 EHGPGSTSKVFSRIPYSASSTVIR-----NNSSHELSLVAFIREMAMPV-PNDEFKKIST 1139
Query: 259 LIDRDYMERDKDKA 272
++ R Y+ D+D++
Sbjct: 1140 ILARGYLALDEDES 1153
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,509,907
Number of Sequences: 539616
Number of extensions: 3336561
Number of successful extensions: 10553
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 10390
Number of HSP's gapped (non-prelim): 121
length of query: 279
length of database: 191,569,459
effective HSP length: 116
effective length of query: 163
effective length of database: 128,974,003
effective search space: 21022762489
effective search space used: 21022762489
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)