BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy836
(122 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VMU4|RL37A_DROME 60S ribosomal protein L37a OS=Drosophila melanogaster GN=RpL37A
PE=1 SV=3
Length = 92
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/115 (69%), Positives = 84/115 (73%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGI GKYGTRYGASLRKMVKKMEITQH+KYTCSFCGKDSMKR+ VGIWSCKRCK
Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRCK 61
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
R VA GGAWVY+TTAA SVRSA+RRLRE E
Sbjct: 62 RTVA-------------------------GGAWVYSTTAAASVRSAVRRLRETKE 91
>sp|O61462|RL37A_CRYST 60S ribosomal protein L37a OS=Cryptochiton stelleri GN=RPL37A PE=3
SV=3
Length = 92
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 80/115 (69%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGI GKYGTRYGASLRK VKKMEITQH+KYTC FCGKD+MKR VGIW CK C+
Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKTVKKMEITQHSKYTCQFCGKDAMKRQAVGIWGCKSCR 61
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
++V AGGAWVY+T AA +VRSA+RRLRE+ E
Sbjct: 62 KVV-------------------------AGGAWVYSTMAAVTVRSAVRRLREMKE 91
>sp|O61598|RL37A_OSTOS 60S ribosomal protein L37a OS=Ostertagia ostertagi GN=rpl-37a PE=3
SV=3
Length = 91
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 79/115 (68%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGI GKYGTRYGASLRKMVKKMEITQH++YTC FCGKD+M+R VGIW+C +CK
Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSRYTCPFCGKDAMRRGAVGIWNCSKCK 61
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
+ VAGGA+VY T AA +VRS +RRLR++ E
Sbjct: 62 -------------------------KTVAGGAYVYGTVAAATVRSTVRRLRDLKE 91
>sp|Q7SZB4|RL37A_XENLA 60S ribosomal protein L37a OS=Xenopus laevis GN=rpl37a PE=3 SV=3
Length = 92
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 78/115 (67%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGI GKYGTR+GASLRKMVKK+EI+QHAKYTCSFCGK MKR VGI
Sbjct: 2 AKRTKKVGIVGKYGTRFGASLRKMVKKIEISQHAKYTCSFCGKTKMKRKAVGI------- 54
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
W C C +IVAGGAW YNTT+A +V+SAIRRL+E+ +
Sbjct: 55 ------------------WHCGSCMKIVAGGAWTYNTTSAVTVKSAIRRLKELKD 91
>sp|P32046|RL37A_CHICK 60S ribosomal protein L37a OS=Gallus gallus GN=RPL37A PE=2 SV=2
Length = 92
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 77/115 (66%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGI GKYGTRYGASLRKMVKK+EI+QHAKYTCSFCGK MKR VGI
Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRKAVGI------- 54
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
W C C + VAGGAW YNTT+A +V+SAIRRL+E+ +
Sbjct: 55 ------------------WHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKELKD 91
>sp|P61515|RL37P_RAT Putative 60S ribosomal protein L37a OS=Rattus norvegicus
GN=Rpl37a-ps1 PE=5 SV=2
Length = 92
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 77/115 (66%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGI GKYGTRYGASLRKMVKK+EI+QHAKYTCSFCGK MKR VGI
Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGI------- 54
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
W C C + VAGGAW YNTT+A +V+SAIRRL+E+ +
Sbjct: 55 ------------------WHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKELKD 91
>sp|Q5RBF9|RL37A_PONAB 60S ribosomal protein L37a OS=Pongo abelii GN=RPL37A PE=3 SV=3
Length = 92
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 77/115 (66%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGI GKYGTRYGASLRKMVKK+EI+QHAKYTCSFCGK MKR VGI
Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGI------- 54
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
W C C + VAGGAW YNTT+A +V+SAIRRL+E+ +
Sbjct: 55 ------------------WHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKELKD 91
>sp|P61514|RL37A_MOUSE 60S ribosomal protein L37a OS=Mus musculus GN=Rpl37a PE=2 SV=2
Length = 92
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 77/115 (66%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGI GKYGTRYGASLRKMVKK+EI+QHAKYTCSFCGK MKR VGI
Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGI------- 54
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
W C C + VAGGAW YNTT+A +V+SAIRRL+E+ +
Sbjct: 55 ------------------WHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKELKD 91
>sp|P61513|RL37A_HUMAN 60S ribosomal protein L37a OS=Homo sapiens GN=RPL37A PE=1 SV=2
Length = 92
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 77/115 (66%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGI GKYGTRYGASLRKMVKK+EI+QHAKYTCSFCGK MKR VGI
Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGI------- 54
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
W C C + VAGGAW YNTT+A +V+SAIRRL+E+ +
Sbjct: 55 ------------------WHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKELKD 91
>sp|Q3MIC0|RL37A_BOVIN 60S ribosomal protein L37a OS=Bos taurus GN=RPL37A PE=3 SV=3
Length = 92
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 77/115 (66%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGI GKYGTRYGASLRKMVKK+EI+QHAKYTCSFCGK MKR VGI
Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGI------- 54
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
W C C + VAGGAW YNTT+A +V+SAIRRL+E+ +
Sbjct: 55 ------------------WHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKELKD 91
>sp|Q90YT0|RL37A_ICTPU 60S ribosomal protein L37a OS=Ictalurus punctatus GN=rpl37a PE=3
SV=3
Length = 92
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 77/115 (66%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGI GKYGTRYGASLRKMVKK+EI+QHAKYTCSFCGK MKR VGI
Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGI------- 54
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
W C C + VAGGAW YNTT+A +V+SAI+RL+E+ +
Sbjct: 55 ------------------WHCGSCMKTVAGGAWTYNTTSAVTVKSAIKRLKEMKD 91
>sp|Q54UG4|RL37A_DICDI 60S ribosomal protein L37a OS=Dictyostelium discoideum GN=rpl37A
PE=3 SV=1
Length = 91
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 75/115 (65%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVG+ GKYGTRYGASLRK VKKMEITQH YTCSFCGKD+++RS VGIW C C+
Sbjct: 2 AKRTKKVGVVGKYGTRYGASLRKQVKKMEITQHGTYTCSFCGKDAVRRSSVGIWKCNGCR 61
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
+++ AGGAW +T A +VRS IRRLRE+N
Sbjct: 62 KVL-------------------------AGGAWTMSTAAGATVRSTIRRLRELNN 91
>sp|Q9U2A8|RL37A_CAEEL 60S ribosomal protein L37a OS=Caenorhabditis elegans GN=rpl-43 PE=3
SV=3
Length = 91
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 76/115 (66%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGI GKYGTRYGASLRKM KK+E+ QH++YTCSFCGK++MKR GIW+C +C
Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKMAKKLEVAQHSRYTCSFCGKEAMKRKATGIWNCAKCH 61
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
++ VAGGA+VY T A +VRS IRRLR++ E
Sbjct: 62 KV-------------------------VAGGAYVYGTVTAATVRSTIRRLRDLKE 91
>sp|Q9Y0H7|RL37A_MYXGL 60S ribosomal protein L37a (Fragment) OS=Myxine glutinosa GN=rpl37a
PE=3 SV=1
Length = 85
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 71/109 (65%), Gaps = 25/109 (22%)
Query: 13 VGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKRIVAGG 72
VGI GKYGTRYGASLRKMVKK+EITQH+KYTC+FCGK MKR VGI
Sbjct: 1 VGIVGKYGTRYGASLRKMVKKIEITQHSKYTCTFCGKTKMKRRAVGI------------- 47
Query: 73 AWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
W C C + VAGGAW YNT++A +V+SAIRRLRE+ +
Sbjct: 48 ------------WHCGSCMKTVAGGAWTYNTSSAVTVKSAIRRLREMKD 84
>sp|Q751L1|RL43_ASHGO 60S ribosomal protein L43 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPL43 PE=3 SV=1
Length = 92
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 74/115 (64%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGITGKYG RYG+SLR+ VKK+E+ QHA+Y CSFCGK ++KR GIW+C CK
Sbjct: 2 AKRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHARYDCSFCGKKAVKRGAAGIWNCSSCK 61
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
+ VAGGA+ ++T AA +VRS IRRLRE+ E
Sbjct: 62 -------------------------KTVAGGAYTFSTAAAATVRSTIRRLREMAE 91
>sp|Q23G98|RL37A_TETTS 60S ribosomal protein L37a OS=Tetrahymena thermophila (strain
SB210) GN=RPL37A PE=1 SV=1
Length = 103
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 53/69 (76%), Positives = 61/69 (88%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRT+KVGIT KYGTRYGASLRK+VKK EITQHAKY C FCGK ++KR+ VGIW CK CK
Sbjct: 2 AKRTQKVGITRKYGTRYGASLRKVVKKFEITQHAKYGCPFCGKVAVKRAAVGIWKCKPCK 61
Query: 67 RIVAGGAWD 75
+I+AGGAW+
Sbjct: 62 KIIAGGAWE 70
>sp|A4S6Z4|RL37A_OSTLU 60S ribosomal protein L37a OS=Ostreococcus lucimarinus (strain
CCE9901) GN=RPL37a PE=3 SV=1
Length = 92
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 70/115 (60%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGI GKYGTRYGASLRK+VKK E++QH+K+ C FCGK MKR VGIWSCK C
Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKVVKKQEVSQHSKFFCDFCGKYGMKRKAVGIWSCKGCN 61
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
+ AGGA+ NT + +VRS IRRLRE E
Sbjct: 62 KTKAGGAYS-------------------------LNTGGSVTVRSTIRRLREATE 91
>sp|Q6FRG6|RL43_CANGA 60S ribosomal protein L43 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPL43
PE=3 SV=1
Length = 92
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 73/115 (63%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGITGKYG RYG+SLR+ VKK+E+ QHA+Y CSFCGK +++R GIWSC CK
Sbjct: 2 AKRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHARYDCSFCGKKTVRRGAAGIWSCHSCK 61
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
+ VAGGA+ +T AA +VRS IRRLR++ E
Sbjct: 62 -------------------------KTVAGGAYTVSTAAAATVRSTIRRLRDMVE 91
>sp|P0CX26|RL43B_YEAST 60S ribosomal protein L43-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL43B PE=1 SV=1
Length = 92
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 73/115 (63%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGITGKYG RYG+SLR+ VKK+EI QHA+Y CSFCGK ++KR GIW+C CK
Sbjct: 2 AKRTKKVGITGKYGVRYGSSLRRQVKKLEIQQHARYDCSFCGKKTVKRGAAGIWTCSCCK 61
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
+ VAGGA+ +T AA +VRS IRRLRE+ E
Sbjct: 62 -------------------------KTVAGGAYTVSTAAAATVRSTIRRLREMVE 91
>sp|P0CX25|RL43A_YEAST 60S ribosomal protein L43-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL43A PE=1 SV=1
Length = 92
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 73/115 (63%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGITGKYG RYG+SLR+ VKK+EI QHA+Y CSFCGK ++KR GIW+C CK
Sbjct: 2 AKRTKKVGITGKYGVRYGSSLRRQVKKLEIQQHARYDCSFCGKKTVKRGAAGIWTCSCCK 61
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
+ VAGGA+ +T AA +VRS IRRLRE+ E
Sbjct: 62 -------------------------KTVAGGAYTVSTAAAATVRSTIRRLREMVE 91
>sp|D4AAZ6|RL37A_RAT 60S ribosomal protein L37a OS=Rattus norvegicus GN=Rpl37a PE=1
SV=1
Length = 72
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/68 (80%), Positives = 58/68 (85%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGI GKYGTRYGASLRKMVKK+EI+QHAKYTCSFCGK MKR VGIW C C
Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCM 61
Query: 67 RIVAGGAW 74
+ VAGGAW
Sbjct: 62 KTVAGGAW 69
>sp|Q5QM99|RL37A_ORYSJ 60S ribosomal protein L37a OS=Oryza sativa subsp. japonica
GN=Os01g0679700 PE=1 SV=1
Length = 92
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 70/114 (61%), Gaps = 25/114 (21%)
Query: 8 KRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKR 67
KRTKK GI GKYGTRYGASLRK +KKME++QH+KY C FCGK ++KR VGIW CK C
Sbjct: 3 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDC-- 60
Query: 68 IVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
++ AGGA+ NT +A +VRS IRRLRE E
Sbjct: 61 -----------------------GKVKAGGAYTMNTASAVTVRSTIRRLREQTE 91
>sp|Q9XHE4|RL37A_GOSHI 60S ribosomal protein L37a OS=Gossypium hirsutum GN=RPL37A PE=3
SV=1
Length = 92
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 70/114 (61%), Gaps = 25/114 (21%)
Query: 8 KRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKR 67
KRTKK GI GKYGTRYGASLRK +KKME++QH+KY C FCGK ++KR VGIW CK C
Sbjct: 3 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKAC-- 60
Query: 68 IVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
++ AGGA+ NT +A +VRS IRRLRE E
Sbjct: 61 -----------------------GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91
>sp|Q8RXU5|R37A2_ARATH 60S ribosomal protein L37a-2 OS=Arabidopsis thaliana GN=RPL37AC
PE=3 SV=1
Length = 92
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 71/115 (61%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGI GKYGTRYGAS+RK +KKME++QH+KY C FCGK +KR VGIW CK C
Sbjct: 2 AKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDC- 60
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
++ AGGA+ NT +A +VRS IRRLRE E
Sbjct: 61 ------------------------GKVKAGGAYTMNTASAVTVRSTIRRLREQIE 91
>sp|Q9ZRS8|RL37A_PSEMZ 60S ribosomal protein L37a OS=Pseudotsuga menziesii GN=RPL37A PE=3
SV=1
Length = 92
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 70/114 (61%), Gaps = 25/114 (21%)
Query: 8 KRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKR 67
KRTKK GI GKYGTRYGASLRK +KKME++QH+K+ C FCGK ++KR VGIW CK C
Sbjct: 3 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKFAVKRKAVGIWGCKDC-- 60
Query: 68 IVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
++ AGGA+ NT +A +VRS IRRLRE E
Sbjct: 61 -----------------------GKVKAGGAYTLNTPSAVTVRSTIRRLREQTE 91
>sp|O17307|RL37A_SCHMA 60S ribosomal protein L37a (Fragment) OS=Schistosoma mansoni PE=3
SV=1
Length = 91
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 58/67 (86%)
Query: 8 KRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKR 67
KRTKKVGI GKYG RYGASLRK +KK+EI+QHAKY C+FCGKDS+KR GIW CK CK+
Sbjct: 2 KRTKKVGIVGKYGVRYGASLRKTIKKIEISQHAKYNCNFCGKDSLKRKAAGIWECKACKK 61
Query: 68 IVAGGAW 74
+VAGGA+
Sbjct: 62 VVAGGAY 68
>sp|Q00VK4|RL37A_OSTTA 60S ribosomal protein L37a OS=Ostreococcus tauri GN=RPL37a PE=3
SV=2
Length = 92
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 69/115 (60%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGI GKYGTRYGASLRK+VKK E++QH+K+ C FCGK MKR VGIW CK C
Sbjct: 2 AKRTKKVGIVGKYGTRYGASLRKVVKKTEVSQHSKFFCDFCGKYGMKRQAVGIWCCKGCN 61
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
+ AGGA+ NT + +VRS IRRLRE E
Sbjct: 62 KTKAGGAYS-------------------------LNTGGSVTVRSTIRRLREATE 91
>sp|Q9SRK6|R37A1_ARATH Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana
GN=RPL37AB PE=3 SV=1
Length = 92
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 68/114 (59%), Gaps = 25/114 (21%)
Query: 8 KRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKR 67
KRTKK I GKYGTRYGASLRK +KKME++QH KY C FCGK S+KR VGIW CK C
Sbjct: 3 KRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDC-- 60
Query: 68 IVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
++ AGGA+ NT +A +VRS IRRLRE E
Sbjct: 61 -----------------------GKVKAGGAYTMNTASAVTVRSTIRRLREQTE 91
>sp|P43209|RL37A_BRARA 60S ribosomal protein L37a OS=Brassica rapa GN=RPL37A PE=3 SV=2
Length = 93
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 71/116 (61%), Gaps = 26/116 (22%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
AKRTKKVGI GKYGTRYGAS+RK +KKME++QH+KY C FCGK +KR VGIW CK C
Sbjct: 2 AKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDC- 60
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRS-AIRRLREVNE 121
++ AGGA+ NT +A +VRS IRRLRE E
Sbjct: 61 ------------------------GKVKAGGAYTMNTASAVTVRSHTIRRLREQIE 92
>sp|O96184|RL37A_PLAF7 60S ribosomal protein L37a OS=Plasmodium falciparum (isolate 3D7)
GN=RPL37A PE=3 SV=1
Length = 96
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 72/115 (62%), Gaps = 25/115 (21%)
Query: 7 AKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCK 66
++RTKKVG+TGKYGTRYG+SLRK +KK+E+ QHAKY C+FCGK + KR+CVGIW CK+CK
Sbjct: 2 SRRTKKVGLTGKYGTRYGSSLRKQIKKIELMQHAKYLCTFCGKTATKRTCVGIWKCKKCK 61
Query: 67 RIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
R V GGAW T AA + +S I RLR+ E
Sbjct: 62 RKVCGGAWS-------------------------LTTPAAVAAKSTIIRLRKQKE 91
>sp|A6NKH3|RL37L_HUMAN Putative 60S ribosomal protein L37a-like OS=Homo sapiens GN=RPL37L
PE=5 SV=2
Length = 93
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 67/116 (57%), Gaps = 26/116 (22%)
Query: 7 AKRTKKVG-ITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRC 65
AK TKKVG I KY T +GASL KMVK++EI+QH KYTCSFCGK MKR V I C C
Sbjct: 2 AKCTKKVGGIVSKYRTHHGASLWKMVKEIEISQHTKYTCSFCGKTKMKRRAVKIRHCNSC 61
Query: 66 KRIVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
+ VAG AW YNTT+A V+SAIRRL+E+ +
Sbjct: 62 MKT-------------------------VAGSAWTYNTTSAVMVKSAIRRLKELKD 92
>sp|Q9HGL8|RL43A_SCHPO 60S ribosomal protein L43-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl43a PE=3 SV=1
Length = 94
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 56/67 (83%), Gaps = 2/67 (2%)
Query: 8 KRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSC--KRC 65
KRTKKVG+TGKYG RYGASLR+ V+K+E+ QH++Y C FCG++++KR+ GIW C K C
Sbjct: 3 KRTKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRNTVKRTAAGIWCCNGKGC 62
Query: 66 KRIVAGG 72
K+++AGG
Sbjct: 63 KKVLAGG 69
>sp|O94686|RL43B_SCHPO 60S ribosomal protein L43-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl43b PE=3 SV=1
Length = 94
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 72/115 (62%), Gaps = 23/115 (20%)
Query: 8 KRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKR 67
KRTKKVG+TGKYG RYGASLR+ V+K+E+ QH++Y C FCG+ ++KR+ GIW C
Sbjct: 3 KRTKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRLTVKRTAAGIWKC----- 57
Query: 68 IVAGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNEL 122
S K C + +AGGAW T AATS RS IRRLRE+ E+
Sbjct: 58 ------------------SGKGCSKTLAGGAWTVTTAAATSARSTIRRLREMVEV 94
>sp|O26777|RL37A_METTH 50S ribosomal protein L37Ae OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl37ae PE=3 SV=1
Length = 89
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 9 RTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKRI 68
RTKKVGITG++G RYG ++ VKK+E K+ C C + +KR GIW C++C +
Sbjct: 3 RTKKVGITGRFGPRYGRKAKRAVKKIEEEMKRKHVCPSCDRPGVKRESRGIWKCRKCGAV 62
Query: 69 VAGGAWDSMKRSCVGIWSCKRCKRIVAG 96
GGA+ + + +G + + KRIV G
Sbjct: 63 FTGGAYLPV--TPMGKTAARNIKRIVGG 88
>sp|C6A452|RL37A_THESM 50S ribosomal protein L37Ae OS=Thermococcus sibiricus (strain MM
739 / DSM 12597) GN=rpl37ae PE=3 SV=1
Length = 85
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%)
Query: 8 KRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKR 67
RTKKVG G++G RYG +R+ V +E K+TC CG+ +++R GIW C++C
Sbjct: 2 PRTKKVGSAGRFGPRYGLKIRRRVAAVEEKMRQKHTCPVCGRKAVRRISTGIWQCQKCGA 61
Query: 68 IVAGGAW 74
AGGA+
Sbjct: 62 TFAGGAY 68
>sp|Q9V202|RL37A_PYRAB 50S ribosomal protein L37Ae OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpl37ae PE=3 SV=1
Length = 83
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 10 TKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKRIV 69
TKKVG G++G RYG +R+ V +E K+ C CG+ +++R GIW CK+C I
Sbjct: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIF 63
Query: 70 AGGAW 74
AGGA+
Sbjct: 64 AGGAY 68
>sp|Q8TZI4|RL37A_PYRFU 50S ribosomal protein L37Ae OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl37ae PE=1 SV=1
Length = 83
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 10 TKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKRIV 69
TKKVG G++G RYG +R+ V +E K+TC CG+ ++KR GIW C++C
Sbjct: 4 TKKVGSAGRFGARYGLKIRRRVAAVEAKMRQKHTCPVCGRKAVKRISTGIWQCQKCGATF 63
Query: 70 AGGAW 74
AGGA+
Sbjct: 64 AGGAY 68
>sp|P54051|RL37A_METJA 50S ribosomal protein L37Ae OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=rpl37ae PE=3 SV=1
Length = 92
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 53/112 (47%), Gaps = 25/112 (22%)
Query: 10 TKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKRIV 69
TKKVG TG++G RYG +R V+ +EI KY C CG +KR+ IW C +C
Sbjct: 5 TKKVGPTGRFGPRYGLKIRVRVRDVEIKAKKKYKCPVCGFPKLKRASTSIWVCGKC---- 60
Query: 70 AGGAWDSMKRSCVGIWSCKRCKRIVAGGAWVYNTTAATSVRSAIRRLREVNE 121
GA +AGGA+ T A +V AIRR+ E E
Sbjct: 61 --GAK-------------------IAGGAYTPETGAGKAVMKAIRRIVERKE 91
>sp|Q2NEX3|RL37A_METST 50S ribosomal protein L37Ae OS=Methanosphaera stadtmanae (strain
DSM 3091) GN=rpl37ae PE=3 SV=1
Length = 89
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 12 KVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKRIVAG 71
KVG TG++G RYG ++ VK +E HAK+ C C + +KR+ GIW C++C + G
Sbjct: 6 KVGSTGRFGARYGRKAKRTVKDIEDKMHAKHVCPKCDRPGVKRTHAGIWKCRKCGAVFTG 65
Query: 72 GAWDSMKRSCVGIWSCKRCKRIVAG 96
GA+ + + +G + + KRI G
Sbjct: 66 GAY--IPTTPMGKVAKRNIKRITGG 88
>sp|O74106|RL37A_PYRHO 50S ribosomal protein L37Ae OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl37ae PE=3 SV=2
Length = 83
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 10 TKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKRIV 69
TKKVG G++G RYG +R+ V +E K+ C CG+ ++KR GIW C +C I
Sbjct: 4 TKKVGSAGRFGARYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVKRISTGIWQCTKCGAIF 63
Query: 70 AGGAW 74
AGGA+
Sbjct: 64 AGGAY 68
>sp|B8D6B7|RL37A_DESK1 50S ribosomal protein L37Ae OS=Desulfurococcus kamchatkensis
(strain 1221n / DSM 18924) GN=rpl37ae PE=3 SV=1
Length = 86
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 9 RTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCG-KDSMKRSCVGIWSCKRCKR 67
+TK VGI G+YGTRYG++LRK ++ + +++ +TC FCG K + R G+W+CK+C
Sbjct: 3 KTKVVGIAGRYGTRYGSTLRKKIRDILEKRYSPHTCPFCGHKGKVYRLSTGVWACKKCGA 62
Query: 68 IVAGGAW 74
AGGA+
Sbjct: 63 KWAGGAY 69
>sp|A5UNQ7|RL37A_METS3 50S ribosomal protein L37Ae OS=Methanobrevibacter smithii (strain
PS / ATCC 35061 / DSM 861) GN=rpl37ae PE=3 SV=1
Length = 89
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 9 RTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKRI 68
RTKKVGITG++G RYG ++ VK +E + C C + +KR GIW C++C +
Sbjct: 3 RTKKVGITGRFGARYGRKAKRSVKMIEENMKKNHVCPRCDRPYVKRQAAGIWKCRKCGAV 62
Query: 69 VAGGAW 74
GGA+
Sbjct: 63 FTGGAY 68
>sp|Q8TYC3|RL37A_METKA 50S ribosomal protein L37Ae OS=Methanopyrus kandleri (strain AV19
/ DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl37ae PE=3
SV=1
Length = 89
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 9 RTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKRI 68
RTKKVG G++G RYG +R+ V ++E Q K+ C C K ++KR GIW C +C
Sbjct: 3 RTKKVGPAGRFGPRYGMRIRRRVAEIESVQRQKHECPVCHKRAVKRVGTGIWRCTKCGAE 62
Query: 69 VAGGAW 74
GGA+
Sbjct: 63 FTGGAY 68
>sp|Q5JDM6|RL37A_PYRKO 50S ribosomal protein L37Ae OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=rpl37ae PE=3 SV=1
Length = 86
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 9 RTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKRI 68
RT KVG G++G RYG +R+ V +E K+ C CG+ +++R GIW C++C
Sbjct: 3 RTTKVGSAGRFGPRYGLKIRRRVAAVEARMKQKHVCPVCGRKAVRRISTGIWQCQKCGAT 62
Query: 69 VAGGAW 74
AGGA+
Sbjct: 63 FAGGAY 68
>sp|B6YTZ8|RL37A_THEON 50S ribosomal protein L37Ae OS=Thermococcus onnurineus (strain
NA1) GN=rpl37ae PE=3 SV=1
Length = 86
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 9 RTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKRI 68
RT KVG G++G RYG +R+ V +E K+ C CG+ +++R GIW C++C
Sbjct: 3 RTTKVGSAGRFGPRYGLKIRRRVAAVEAKMKQKHICPVCGRKAVRRISTGIWQCQKCGAT 62
Query: 69 VAGGAW 74
AGGA+
Sbjct: 63 FAGGAY 68
>sp|C5A4Z4|RL37A_THEGJ 50S ribosomal protein L37Ae OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=rpl37ae PE=3 SV=1
Length = 86
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 9 RTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKRI 68
RT KVG G++G RYG +R+ V +E K+ C CG+ +++R GIW C++C
Sbjct: 3 RTVKVGSAGRFGPRYGLKIRRRVAAVEARMKQKHVCPVCGRKAVRRISTGIWQCQKCGAT 62
Query: 69 VAGGAW 74
AGGA+
Sbjct: 63 FAGGAY 68
>sp|Q9YC06|RL37A_AERPE 50S ribosomal protein L37Ae OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=rpl37ae PE=3 SV=1
Length = 86
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 9 RTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGK-DSMKRSCVGIWSCKRCKR 67
RTK VG G+YG RYG S+RK V+ + ++ + C FCG +++R VG+WSC++C
Sbjct: 3 RTKVVGPAGRYGPRYGVSVRKRVRDILARRYQPHECPFCGSTGTVRRVSVGVWSCRKCGN 62
Query: 68 IVAGGAWDS 76
AG A+
Sbjct: 63 TWAGAAYTP 71
>sp|O30179|RL37A_ARCFU 50S ribosomal protein L37Ae OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl37ae PE=3 SV=1
Length = 83
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%)
Query: 9 RTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKRI 68
RTKKV G++G RYG +R+ ++E Q KY C CGK ++KRS GIW C+ C
Sbjct: 3 RTKKVRSAGRFGPRYGLRVRRTWLEIEAVQRQKYVCKKCGKKAVKRSGTGIWECRHCGYK 62
Query: 69 VAGGAWDSM 77
AGG + +
Sbjct: 63 FAGGCYQPV 71
>sp|Q74N55|RL37A_NANEQ 50S ribosomal protein L37Ae OS=Nanoarchaeum equitans (strain
Kin4-M) GN=rpl37ae PE=3 SV=1
Length = 86
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 9 RTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKRI 68
TKKVG TG++G RYG +RK V +EI Q K+ C FC ++ R GI+ CK+C +
Sbjct: 5 HTKKVGPTGRFGPRYGLGIRKRVLTVEIKQRKKHVCPFCRSKAVIREAYGIYRCKKCGKQ 64
Query: 69 VAGGAW 74
G A+
Sbjct: 65 FTGLAY 70
>sp|Q6M0M1|RL37A_METMP 50S ribosomal protein L37Ae OS=Methanococcus maripaludis (strain
S2 / LL) GN=rpl37ae PE=3 SV=1
Length = 96
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 10 TKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKDSMKRSCVGIWSCKRCKRIV 69
TKK+G G++G+RYG +R ++ +EI Q+ Y C C +KR+ IW C++C +
Sbjct: 7 TKKIGSAGRFGSRYGRKIRVRLRDVEIKQNKDYKCPVCAFPKLKRAGTSIWVCEKCGAKI 66
Query: 70 AGGAW 74
AGGA+
Sbjct: 67 AGGAY 71
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.132 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,854,591
Number of Sequences: 539616
Number of extensions: 1429362
Number of successful extensions: 5379
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 5224
Number of HSP's gapped (non-prelim): 134
length of query: 122
length of database: 191,569,459
effective HSP length: 89
effective length of query: 33
effective length of database: 143,543,635
effective search space: 4736939955
effective search space used: 4736939955
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)