Query psy8365
Match_columns 381
No_of_seqs 496 out of 1353
Neff 11.1
Searched_HMMs 46136
Date Fri Aug 16 16:48:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8365.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8365hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 6.1E-38 1.3E-42 267.8 21.8 340 27-381 22-386 (448)
2 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.7E-35 3.8E-40 269.2 25.9 342 30-381 4-373 (412)
3 PRK09556 uhpT sugar phosphate 100.0 7.4E-36 1.6E-40 276.4 22.0 343 30-381 25-389 (467)
4 COG2814 AraJ Arabinose efflux 100.0 1.5E-34 3.3E-39 250.6 27.6 284 31-336 10-293 (394)
5 PRK10406 alpha-ketoglutarate t 100.0 4.9E-34 1.1E-38 261.8 30.7 336 31-381 19-376 (432)
6 PRK14995 methyl viologen resis 100.0 1.8E-34 3.9E-39 268.6 27.2 334 31-380 3-390 (495)
7 TIGR00903 2A0129 major facilit 100.0 1.5E-34 3.3E-39 257.8 23.4 313 46-381 3-320 (368)
8 PRK11551 putative 3-hydroxyphe 100.0 1.6E-33 3.5E-38 257.0 28.8 336 28-381 9-348 (406)
9 PRK03545 putative arabinose tr 100.0 1.1E-33 2.3E-38 256.5 27.3 325 31-380 6-332 (390)
10 KOG4686|consensus 100.0 5.5E-35 1.2E-39 235.5 16.3 357 25-381 35-392 (459)
11 PRK10133 L-fucose transporter; 100.0 3.4E-33 7.4E-38 255.4 29.3 345 27-380 19-385 (438)
12 TIGR00891 2A0112 putative sial 100.0 4E-33 8.7E-38 254.4 29.1 339 29-381 7-368 (405)
13 PRK09705 cynX putative cyanate 100.0 1.2E-32 2.5E-37 249.4 29.3 323 32-380 8-332 (393)
14 PRK11663 regulatory protein Uh 100.0 3.5E-33 7.7E-38 256.1 26.2 336 30-381 19-377 (434)
15 PF07690 MFS_1: Major Facilita 100.0 3.2E-34 7E-39 256.6 18.6 327 40-380 2-338 (352)
16 PLN00028 nitrate transmembrane 100.0 2.3E-32 5E-37 252.9 31.0 338 33-381 35-387 (476)
17 PRK15075 citrate-proton sympor 100.0 1.2E-32 2.5E-37 252.8 28.2 336 32-380 13-370 (434)
18 TIGR00890 2A0111 Oxalate/Forma 100.0 6.6E-33 1.4E-37 250.4 24.0 317 46-381 15-335 (377)
19 PRK10642 proline/glycine betai 100.0 3.9E-32 8.5E-37 252.8 29.2 337 34-380 16-381 (490)
20 TIGR00900 2A0121 H+ Antiporter 100.0 7.6E-33 1.6E-37 249.0 22.6 326 41-380 6-340 (365)
21 PRK03699 putative transporter; 100.0 8.5E-32 1.8E-36 244.2 29.4 320 32-373 5-326 (394)
22 PRK12307 putative sialic acid 100.0 6.1E-32 1.3E-36 248.2 28.6 333 30-381 14-361 (426)
23 TIGR00711 efflux_EmrB drug res 100.0 9.9E-33 2.2E-37 257.7 23.6 330 36-380 4-387 (485)
24 PRK10213 nepI ribonucleoside t 100.0 1.4E-31 3E-36 242.3 30.1 318 32-373 18-337 (394)
25 TIGR00893 2A0114 d-galactonate 100.0 5.1E-33 1.1E-37 252.8 20.9 325 43-380 3-350 (399)
26 TIGR00886 2A0108 nitrite extru 100.0 7.6E-32 1.7E-36 242.6 25.8 334 38-381 5-357 (366)
27 TIGR00710 efflux_Bcr_CflA drug 100.0 9E-32 2E-36 243.9 26.4 320 42-380 13-338 (385)
28 PRK11273 glpT sn-glycerol-3-ph 100.0 8.6E-32 1.9E-36 248.3 26.5 341 28-381 23-387 (452)
29 PRK15034 nitrate/nitrite trans 100.0 1.9E-31 4.2E-36 239.5 27.5 326 29-372 29-376 (462)
30 COG2223 NarK Nitrate/nitrite t 100.0 6E-32 1.3E-36 231.7 22.5 334 30-379 10-351 (417)
31 PRK09952 shikimate transporter 100.0 7.2E-31 1.6E-35 240.9 30.0 338 30-380 18-382 (438)
32 TIGR00894 2A0114euk Na(+)-depe 100.0 1E-31 2.3E-36 249.1 23.2 281 28-319 13-327 (465)
33 TIGR01299 synapt_SV2 synaptic 100.0 1.5E-31 3.3E-36 253.8 24.2 345 29-381 162-688 (742)
34 PRK10504 putative transporter; 100.0 9.8E-31 2.1E-35 243.1 28.6 330 36-380 12-392 (471)
35 PRK15402 multidrug efflux syst 100.0 4.8E-31 1E-35 240.5 26.1 333 29-380 8-347 (406)
36 TIGR00895 2A0115 benzoate tran 100.0 2E-31 4.4E-36 242.6 23.5 337 30-380 13-377 (398)
37 TIGR00881 2A0104 phosphoglycer 100.0 4.9E-32 1.1E-36 244.9 18.6 324 42-380 3-349 (379)
38 TIGR00892 2A0113 monocarboxyla 100.0 2.5E-30 5.4E-35 238.2 28.1 336 29-380 14-372 (455)
39 TIGR00885 fucP L-fucose:H+ sym 100.0 2E-30 4.4E-35 235.1 26.8 330 36-375 5-355 (410)
40 TIGR00712 glpT glycerol-3-phos 100.0 4.5E-30 9.8E-35 236.0 27.3 339 31-381 24-385 (438)
41 PRK03893 putative sialic acid 100.0 6.1E-30 1.3E-34 239.5 28.6 335 30-381 16-406 (496)
42 PRK10091 MFS transport protein 100.0 4.5E-30 9.7E-35 232.0 25.8 318 37-377 6-326 (382)
43 KOG1330|consensus 100.0 1.7E-31 3.7E-36 230.6 15.3 340 27-380 26-388 (493)
44 PRK11102 bicyclomycin/multidru 100.0 3.7E-30 8E-35 232.6 23.5 315 49-380 6-325 (377)
45 TIGR00897 2A0118 polyol permea 100.0 1.2E-29 2.6E-34 230.7 26.4 311 55-380 34-353 (402)
46 PRK15403 multidrug efflux syst 100.0 1.3E-29 2.8E-34 230.7 26.2 264 40-320 22-285 (413)
47 TIGR00879 SP MFS transporter, 100.0 1.3E-29 2.9E-34 236.3 25.3 335 32-380 26-422 (481)
48 PRK05122 major facilitator sup 100.0 1.5E-29 3.3E-34 230.2 24.9 317 36-380 17-341 (399)
49 TIGR00883 2A0106 metabolite-pr 100.0 2.8E-29 6.1E-34 228.1 26.3 327 44-381 3-352 (394)
50 PRK10077 xylE D-xylose transpo 100.0 4.7E-29 1E-33 232.6 28.1 344 30-380 8-403 (479)
51 PRK03633 putative MFS family t 100.0 2.7E-29 5.8E-34 227.0 25.6 315 36-378 8-322 (381)
52 TIGR00896 CynX cyanate transpo 100.0 4.2E-29 9.1E-34 223.7 26.1 307 51-380 17-325 (355)
53 PRK11652 emrD multidrug resist 100.0 4.8E-29 1E-33 226.5 26.7 325 35-380 9-337 (394)
54 PRK11043 putative transporter; 100.0 7.8E-29 1.7E-33 225.7 27.0 318 39-380 11-334 (401)
55 PRK12382 putative transporter; 100.0 5.7E-29 1.2E-33 225.9 25.2 312 41-380 22-341 (392)
56 PRK10473 multidrug efflux syst 100.0 1.9E-28 4.1E-33 222.4 28.0 266 43-327 12-277 (392)
57 PRK10489 enterobactin exporter 100.0 8.6E-30 1.9E-34 233.0 18.6 322 43-380 26-351 (417)
58 cd06174 MFS The Major Facilita 100.0 2E-28 4.2E-33 219.0 26.7 298 39-380 4-304 (352)
59 PRK11195 lysophospholipid tran 100.0 5.4E-29 1.2E-33 225.3 22.4 318 40-380 9-333 (393)
60 TIGR00887 2A0109 phosphate:H+ 100.0 2.3E-28 4.9E-33 228.4 26.7 347 27-381 9-432 (502)
61 TIGR00899 2A0120 sugar efflux 100.0 5.5E-28 1.2E-32 218.3 27.1 315 43-380 6-326 (375)
62 TIGR00901 2A0125 AmpG-related 100.0 1.4E-28 3.1E-33 220.4 22.7 321 51-381 5-349 (356)
63 PRK09874 drug efflux system pr 100.0 1.5E-27 3.2E-32 218.0 28.9 322 38-380 18-350 (408)
64 COG0738 FucP Fucose permease [ 100.0 4E-27 8.6E-32 200.8 27.9 328 36-372 15-355 (422)
65 PRK11646 multidrug resistance 100.0 2.1E-27 4.5E-32 215.5 28.0 303 55-381 32-337 (400)
66 KOG2533|consensus 100.0 1.8E-28 4E-33 222.2 20.9 301 32-339 43-363 (495)
67 KOG2532|consensus 100.0 3.4E-28 7.3E-33 220.1 22.3 285 61-356 65-370 (466)
68 PRK11010 ampG muropeptide tran 100.0 1.3E-27 2.8E-32 221.7 24.9 329 37-380 15-355 (491)
69 TIGR00902 2A0127 phenyl propri 100.0 7.3E-28 1.6E-32 217.5 21.9 320 39-380 9-331 (382)
70 PRK10054 putative transporter; 100.0 8E-27 1.7E-31 211.3 25.8 316 43-380 16-337 (395)
71 PRK15011 sugar efflux transpor 100.0 5.7E-26 1.2E-30 206.0 30.8 312 44-380 25-343 (393)
72 PRK08633 2-acyl-glycerophospho 100.0 3.4E-27 7.4E-32 242.0 24.5 325 49-380 25-361 (1146)
73 TIGR00898 2A0119 cation transp 100.0 2.8E-27 6.1E-32 221.9 21.4 306 55-381 110-450 (505)
74 PRK06814 acylglycerophosphoeth 100.0 4.7E-27 1E-31 240.2 22.9 328 41-381 22-374 (1140)
75 TIGR00805 oat sodium-independe 100.0 2E-27 4.4E-32 225.2 18.6 280 37-319 36-397 (633)
76 PRK11128 putative 3-phenylprop 100.0 2E-26 4.3E-31 208.2 22.3 312 44-380 14-331 (382)
77 KOG0569|consensus 100.0 2E-25 4.3E-30 199.8 27.7 334 38-380 15-407 (485)
78 TIGR00806 rfc RFC reduced fola 99.9 2.4E-25 5.2E-30 196.5 25.8 320 49-381 41-393 (511)
79 PRK11902 ampG muropeptide tran 99.9 1.6E-25 3.4E-30 203.8 24.8 322 40-376 5-342 (402)
80 COG2807 CynX Cyanate permease 99.9 1.2E-24 2.5E-29 183.0 27.8 317 33-373 11-328 (395)
81 PF05977 MFS_3: Transmembrane 99.9 5.1E-25 1.1E-29 202.9 23.4 329 38-380 14-346 (524)
82 PRK09528 lacY galactoside perm 99.9 9.7E-25 2.1E-29 199.8 23.7 318 46-380 22-354 (420)
83 PF06609 TRI12: Fungal trichot 99.9 2.7E-24 5.8E-29 197.4 25.4 328 39-381 49-445 (599)
84 KOG2504|consensus 99.9 1.9E-24 4.1E-29 198.2 23.2 337 28-380 40-427 (509)
85 TIGR00882 2A0105 oligosacchari 99.9 6.8E-24 1.5E-28 192.8 26.3 322 42-379 10-345 (396)
86 KOG0254|consensus 99.9 1.8E-23 3.9E-28 195.6 27.2 327 40-380 51-434 (513)
87 TIGR00924 yjdL_sub1_fam amino 99.9 4.5E-24 9.8E-29 197.1 22.6 330 40-381 16-421 (475)
88 PRK10207 dipeptide/tripeptide 99.9 8.3E-24 1.8E-28 195.4 23.7 333 36-381 16-419 (489)
89 TIGR00889 2A0110 nucleoside tr 99.9 4.3E-24 9.3E-29 194.6 21.0 314 41-380 9-347 (418)
90 TIGR00792 gph sugar (Glycoside 99.9 7E-24 1.5E-28 195.5 18.3 317 56-380 22-357 (437)
91 PTZ00207 hypothetical protein; 99.9 4.1E-22 8.8E-27 184.3 29.8 338 26-378 20-488 (591)
92 KOG2615|consensus 99.9 1E-23 2.2E-28 177.8 16.6 303 67-381 66-392 (451)
93 KOG2563|consensus 99.9 1.6E-22 3.6E-27 174.7 23.8 349 27-380 38-398 (480)
94 KOG3764|consensus 99.9 1.2E-23 2.5E-28 178.5 16.3 290 62-372 99-392 (464)
95 KOG0253|consensus 99.9 2.7E-22 5.9E-27 168.3 22.8 336 28-381 72-474 (528)
96 TIGR02718 sider_RhtX_FptX side 99.9 5.5E-22 1.2E-26 179.9 24.6 327 36-380 3-343 (390)
97 PRK09584 tppB putative tripept 99.9 5.9E-22 1.3E-26 184.1 24.1 327 41-380 28-421 (500)
98 KOG0252|consensus 99.9 2.5E-22 5.5E-27 173.5 14.4 344 29-381 36-446 (538)
99 TIGR01301 GPH_sucrose GPH fami 99.9 7E-20 1.5E-24 166.2 24.3 335 38-380 8-421 (477)
100 PF13347 MFS_2: MFS/sugar tran 99.9 8.7E-21 1.9E-25 174.0 18.6 310 55-373 23-347 (428)
101 PF00083 Sugar_tr: Sugar (and 99.9 3.3E-25 7.1E-30 205.1 -13.0 301 68-381 45-389 (451)
102 PRK15462 dipeptide/tripeptide 99.9 3E-19 6.5E-24 162.8 23.9 327 40-380 15-416 (493)
103 KOG0255|consensus 99.8 1.8E-19 3.9E-24 169.6 22.1 133 61-208 110-242 (521)
104 PF03825 Nuc_H_symport: Nucleo 99.8 4.5E-19 9.8E-24 159.0 22.3 322 43-381 11-341 (400)
105 PRK09669 putative symporter Ya 99.8 2.5E-19 5.3E-24 165.2 20.8 308 55-372 31-350 (444)
106 TIGR01272 gluP glucose/galacto 99.8 1.1E-19 2.3E-24 158.6 17.4 243 123-373 7-262 (310)
107 PRK10429 melibiose:sodium symp 99.8 3.8E-19 8.2E-24 165.0 19.1 308 56-372 29-355 (473)
108 PRK09848 glucuronide transport 99.8 2E-18 4.3E-23 159.5 20.4 301 57-373 32-351 (448)
109 TIGR00788 fbt folate/biopterin 99.8 5.7E-19 1.2E-23 162.8 16.1 327 35-380 27-390 (468)
110 PF03209 PUCC: PUCC protein; 99.8 1.5E-17 3.2E-22 144.0 21.1 310 59-380 5-340 (403)
111 PF11700 ATG22: Vacuole efflux 99.8 4.4E-17 9.5E-22 149.0 23.1 305 69-380 70-419 (477)
112 PRK11462 putative transporter; 99.8 6E-17 1.3E-21 149.3 23.8 305 56-371 32-348 (460)
113 COG2211 MelB Na+/melibiose sym 99.8 2.4E-17 5.1E-22 146.8 19.6 306 58-372 37-358 (467)
114 PF01306 LacY_symp: LacY proto 99.8 1.4E-17 3.1E-22 146.7 17.9 320 43-379 16-350 (412)
115 KOG2325|consensus 99.7 1.2E-16 2.6E-21 142.6 17.9 158 28-187 28-190 (488)
116 COG2270 Permeases of the major 99.7 6E-16 1.3E-20 133.7 19.0 304 68-381 57-381 (438)
117 COG3104 PTR2 Dipeptide/tripept 99.7 6E-16 1.3E-20 136.7 18.6 334 36-380 23-433 (498)
118 KOG3626|consensus 99.7 5.3E-16 1.1E-20 144.1 16.8 282 35-318 98-458 (735)
119 PF03137 OATP: Organic Anion T 99.7 6.4E-18 1.4E-22 156.6 -0.0 277 38-317 7-370 (539)
120 PF05631 DUF791: Protein of un 99.6 2E-13 4.3E-18 116.8 21.7 239 59-315 59-304 (354)
121 TIGR00889 2A0110 nucleoside tr 99.6 1.4E-14 3E-19 132.3 13.2 153 58-213 232-394 (418)
122 PRK11551 putative 3-hydroxyphe 99.6 6.5E-14 1.4E-18 127.9 14.2 130 56-189 242-371 (406)
123 KOG2816|consensus 99.6 6.4E-13 1.4E-17 120.5 20.2 325 36-381 24-370 (463)
124 PRK09528 lacY galactoside perm 99.6 7.3E-14 1.6E-18 128.1 14.1 135 64-210 257-392 (420)
125 TIGR00890 2A0111 Oxalate/Forma 99.5 1.4E-13 3.1E-18 124.2 14.8 134 56-199 227-362 (377)
126 PRK15011 sugar efflux transpor 99.5 6.5E-13 1.4E-17 120.6 19.1 130 59-199 242-371 (393)
127 TIGR00902 2A0127 phenyl propri 99.5 7.9E-13 1.7E-17 119.6 17.5 133 53-190 224-357 (382)
128 PRK10489 enterobactin exporter 99.5 3.5E-13 7.5E-18 123.5 15.1 149 56-216 245-394 (417)
129 TIGR00880 2_A_01_02 Multidrug 99.5 9.2E-14 2E-18 106.7 9.7 120 76-207 5-124 (141)
130 TIGR00892 2A0113 monocarboxyla 99.5 5.7E-13 1.2E-17 123.2 16.1 151 47-208 254-408 (455)
131 PRK09556 uhpT sugar phosphate 99.5 8.9E-13 1.9E-17 122.5 17.2 148 38-187 262-411 (467)
132 PRK05122 major facilitator sup 99.5 1.2E-12 2.6E-17 119.3 17.7 138 57-208 239-376 (399)
133 PRK10642 proline/glycine betai 99.5 1.9E-12 4.2E-17 120.9 18.5 134 55-189 271-405 (490)
134 PRK03699 putative transporter; 99.5 2.5E-12 5.5E-17 116.9 18.6 141 56-209 227-368 (394)
135 TIGR00899 2A0120 sugar efflux 99.5 3.8E-12 8.2E-17 115.0 18.3 136 59-207 225-360 (375)
136 TIGR00883 2A0106 metabolite-pr 99.5 5.9E-13 1.3E-17 120.9 12.7 140 54-199 239-381 (394)
137 PRK11010 ampG muropeptide tran 99.5 1.1E-11 2.5E-16 115.4 20.6 153 57-219 246-400 (491)
138 PRK12382 putative transporter; 99.5 5.6E-12 1.2E-16 114.6 18.2 138 56-207 238-375 (392)
139 cd06174 MFS The Major Facilita 99.5 2.4E-12 5.2E-17 115.0 15.5 146 51-208 192-339 (352)
140 PRK03633 putative MFS family t 99.4 4.1E-12 8.8E-17 115.0 16.7 137 56-207 222-358 (381)
141 PRK09874 drug efflux system pr 99.4 1.3E-12 2.9E-17 119.4 13.7 126 71-208 260-385 (408)
142 COG2271 UhpC Sugar phosphate p 99.4 1.4E-12 3E-17 113.1 11.6 162 34-201 252-416 (448)
143 PRK03893 putative sialic acid 99.4 3.3E-12 7.1E-17 119.9 15.3 134 54-189 295-429 (496)
144 TIGR01299 synapt_SV2 synaptic 99.4 4.7E-12 1E-16 121.5 16.4 113 72-188 598-710 (742)
145 PRK10504 putative transporter; 99.4 1.1E-11 2.4E-16 115.6 18.0 138 52-190 279-417 (471)
146 PRK11273 glpT sn-glycerol-3-ph 99.4 9.6E-12 2.1E-16 115.1 17.4 156 54-220 273-433 (452)
147 TIGR00897 2A0118 polyol permea 99.4 9.6E-12 2.1E-16 113.4 16.8 146 52-208 240-388 (402)
148 PRK09705 cynX putative cyanate 99.4 1.6E-11 3.4E-16 111.6 17.8 131 55-190 226-357 (393)
149 TIGR00900 2A0121 H+ Antiporter 99.4 2.1E-12 4.6E-17 116.0 11.3 131 55-189 232-364 (365)
150 PRK03545 putative arabinose tr 99.4 1.4E-11 3E-16 111.9 16.2 132 57-199 229-360 (390)
151 PRK11128 putative 3-phenylprop 99.4 2.4E-11 5.2E-16 110.0 17.5 130 56-190 227-357 (382)
152 TIGR00891 2A0112 putative sial 99.4 9.4E-12 2E-16 113.6 13.9 130 58-190 263-392 (405)
153 PRK11663 regulatory protein Uh 99.4 2.4E-11 5.3E-16 111.8 16.4 144 55-208 264-411 (434)
154 PRK15075 citrate-proton sympor 99.4 3.4E-11 7.4E-16 110.9 17.0 137 53-190 257-396 (434)
155 PF05977 MFS_3: Transmembrane 99.4 2E-11 4.3E-16 113.3 15.3 132 55-190 239-371 (524)
156 TIGR00895 2A0115 benzoate tran 99.4 8.7E-12 1.9E-16 113.5 12.8 130 52-185 268-397 (398)
157 TIGR00893 2A0114 d-galactonate 99.4 2.6E-11 5.6E-16 110.2 15.8 136 52-189 233-374 (399)
158 PF01770 Folate_carrier: Reduc 99.4 1.5E-09 3.3E-14 95.8 26.0 317 51-380 21-379 (412)
159 PRK12307 putative sialic acid 99.4 2.7E-11 5.9E-16 111.4 15.8 134 55-190 252-385 (426)
160 PF03092 BT1: BT1 family; Int 99.3 2.1E-11 4.6E-16 111.3 14.4 314 54-380 10-357 (433)
161 TIGR00792 gph sugar (Glycoside 99.3 3.3E-11 7.2E-16 111.2 15.8 122 67-191 255-383 (437)
162 TIGR00879 SP MFS transporter, 99.3 3.1E-11 6.6E-16 112.6 15.8 160 40-208 290-457 (481)
163 PF06813 Nodulin-like: Nodulin 99.3 3.8E-11 8.2E-16 99.6 14.3 152 32-187 1-156 (250)
164 COG2814 AraJ Arabinose efflux 99.3 7.2E-11 1.6E-15 103.6 16.7 157 49-219 227-383 (394)
165 PRK09952 shikimate transporter 99.3 6E-11 1.3E-15 109.3 17.2 137 58-199 275-413 (438)
166 KOG4686|consensus 99.3 1.9E-11 4.1E-16 100.2 11.6 152 32-190 265-416 (459)
167 TIGR00882 2A0105 oligosacchari 99.3 5E-11 1.1E-15 108.5 14.3 140 65-216 250-390 (396)
168 PRK10077 xylE D-xylose transpo 99.3 1.4E-10 3.1E-15 108.4 17.1 132 54-186 291-424 (479)
169 TIGR02718 sider_RhtX_FptX side 99.3 1.6E-10 3.5E-15 105.0 15.9 131 58-189 232-367 (390)
170 PRK11646 multidrug resistance 99.3 1.8E-10 3.9E-15 104.9 15.9 132 56-190 230-361 (400)
171 KOG0637|consensus 99.3 1.1E-10 2.3E-15 102.2 13.6 268 40-320 38-363 (498)
172 TIGR00881 2A0104 phosphoglycer 99.3 9.4E-11 2E-15 105.9 13.6 134 59-199 242-377 (379)
173 PRK15402 multidrug efflux syst 99.3 1.3E-10 2.8E-15 106.3 14.5 129 59-189 241-371 (406)
174 COG2223 NarK Nitrate/nitrite t 99.2 1.2E-10 2.6E-15 101.3 12.3 149 40-190 224-377 (417)
175 PRK10091 MFS transport protein 99.2 4.2E-10 9.1E-15 101.9 16.3 133 57-199 223-356 (382)
176 PF07690 MFS_1: Major Facilita 99.2 7.3E-11 1.6E-15 105.5 11.3 126 53-179 225-352 (352)
177 TIGR00896 CynX cyanate transpo 99.2 3.5E-10 7.5E-15 101.4 15.2 131 55-190 218-350 (355)
178 PRK11902 ampG muropeptide tran 99.2 4.5E-10 9.7E-15 102.5 16.2 131 58-199 234-370 (402)
179 PF03825 Nuc_H_symport: Nucleo 99.2 6.7E-10 1.4E-14 100.1 16.7 143 47-192 220-368 (400)
180 PRK10406 alpha-ketoglutarate t 99.2 5.9E-10 1.3E-14 102.7 16.5 128 57-185 266-396 (432)
181 PRK10054 putative transporter; 99.2 4.9E-10 1.1E-14 101.8 15.1 125 62-190 237-361 (395)
182 PF11700 ATG22: Vacuole efflux 99.2 1.1E-09 2.5E-14 100.6 17.4 140 52-192 300-446 (477)
183 TIGR01272 gluP glucose/galacto 99.2 2E-09 4.4E-14 94.1 17.5 120 64-190 173-292 (310)
184 PRK10429 melibiose:sodium symp 99.2 7.9E-10 1.7E-14 102.9 15.0 133 58-191 255-396 (473)
185 PRK10213 nepI ribonucleoside t 99.2 2.1E-09 4.6E-14 97.6 17.2 129 57-190 240-368 (394)
186 KOG2504|consensus 99.2 3.5E-10 7.5E-15 104.6 12.0 167 35-212 299-467 (509)
187 TIGR00711 efflux_EmrB drug res 99.2 5.3E-10 1.1E-14 104.7 13.4 132 56-188 277-410 (485)
188 PRK09848 glucuronide transport 99.2 5.7E-10 1.2E-14 103.3 13.4 129 60-190 255-390 (448)
189 PRK14995 methyl viologen resis 99.1 9E-10 2E-14 103.1 14.5 129 59-188 285-413 (495)
190 PRK10473 multidrug efflux syst 99.1 2.5E-09 5.4E-14 97.3 16.6 123 59-190 229-351 (392)
191 PLN00028 nitrate transmembrane 99.1 5.5E-10 1.2E-14 103.9 11.9 139 58-208 277-420 (476)
192 KOG0569|consensus 99.1 2.6E-09 5.6E-14 96.8 15.5 140 50-190 286-432 (485)
193 TIGR00901 2A0125 AmpG-related 99.1 4E-10 8.6E-15 101.1 10.0 117 55-172 230-355 (356)
194 PRK09669 putative symporter Ya 99.1 3E-09 6.5E-14 98.4 15.7 122 68-191 263-391 (444)
195 PRK11043 putative transporter; 99.1 3.6E-09 7.8E-14 96.5 16.0 129 57-187 226-356 (401)
196 PF13347 MFS_2: MFS/sugar tran 99.1 4.4E-09 9.6E-14 96.7 16.6 148 42-192 233-388 (428)
197 PRK11195 lysophospholipid tran 99.1 1.6E-09 3.5E-14 98.4 13.4 123 58-185 230-353 (393)
198 TIGR00894 2A0114euk Na(+)-depe 99.1 2.7E-09 5.9E-14 99.3 15.0 164 37-207 264-436 (465)
199 PF01306 LacY_symp: LacY proto 99.1 2.1E-09 4.5E-14 95.5 12.9 142 65-218 255-397 (412)
200 TIGR00926 2A1704 Peptide:H+ sy 99.1 5E-08 1.1E-12 93.0 22.9 136 54-189 8-151 (654)
201 TIGR00710 efflux_Bcr_CflA drug 99.1 5.1E-09 1.1E-13 94.9 15.1 122 59-182 232-356 (385)
202 TIGR00712 glpT glycerol-3-phos 99.1 3.2E-09 6.9E-14 98.0 13.7 129 59-189 277-409 (438)
203 COG2270 Permeases of the major 99.0 4.2E-09 9.1E-14 91.9 13.0 131 58-192 277-407 (438)
204 PRK08633 2-acyl-glycerophospho 99.0 6.6E-09 1.4E-13 107.6 16.8 126 58-187 257-383 (1146)
205 TIGR02332 HpaX 4-hydroxyphenyl 99.0 3.8E-09 8.2E-14 96.6 12.9 147 44-199 252-401 (412)
206 PF06963 FPN1: Ferroportin1 (F 99.0 6.4E-07 1.4E-11 80.8 26.2 328 40-380 8-395 (432)
207 TIGR00887 2A0109 phosphate:H+ 99.0 9.4E-09 2E-13 96.6 15.3 134 54-188 308-454 (502)
208 PRK11102 bicyclomycin/multidru 99.0 1.4E-08 3E-13 91.9 15.6 122 59-182 220-343 (377)
209 PRK06814 acylglycerophosphoeth 99.0 9.2E-09 2E-13 106.3 15.1 128 59-187 251-395 (1140)
210 KOG4332|consensus 99.0 1.3E-09 2.8E-14 88.8 6.5 296 59-379 62-382 (454)
211 PRK15034 nitrate/nitrite trans 99.0 1.4E-08 3E-13 92.4 13.9 136 53-190 271-430 (462)
212 COG2211 MelB Na+/melibiose sym 99.0 4.2E-08 9.1E-13 88.2 16.4 142 49-192 251-400 (467)
213 TIGR00898 2A0119 cation transp 98.9 6.5E-09 1.4E-13 97.9 11.5 117 62-183 351-467 (505)
214 PRK10133 L-fucose transporter; 98.9 3.3E-08 7.2E-13 91.0 15.9 126 58-190 283-409 (438)
215 PRK15462 dipeptide/tripeptide 98.9 1E-08 2.2E-13 94.3 11.7 128 252-380 8-141 (493)
216 KOG3098|consensus 98.9 7.3E-08 1.6E-12 86.7 16.0 296 75-378 56-389 (461)
217 COG0477 ProP Permeases of the 98.9 8.4E-08 1.8E-12 83.8 16.1 146 48-199 16-165 (338)
218 TIGR00924 yjdL_sub1_fam amino 98.9 1.2E-08 2.6E-13 94.8 11.1 128 252-380 9-144 (475)
219 TIGR00769 AAA ADP/ATP carrier 98.9 1.6E-06 3.5E-11 79.2 24.1 269 58-331 27-345 (472)
220 PRK11652 emrD multidrug resist 98.9 4.9E-08 1.1E-12 88.9 13.6 125 59-187 233-359 (394)
221 KOG0253|consensus 98.8 2.4E-08 5.1E-13 85.4 9.5 98 79-182 391-490 (528)
222 PRK11462 putative transporter; 98.8 1.6E-07 3.5E-12 87.0 16.1 122 67-190 261-389 (460)
223 TIGR00886 2A0108 nitrite extru 98.8 2.2E-08 4.8E-13 90.1 9.7 126 253-380 1-129 (366)
224 TIGR00788 fbt folate/biopterin 98.8 4E-08 8.7E-13 91.1 11.1 128 62-190 281-415 (468)
225 PRK10207 dipeptide/tripeptide 98.8 4E-08 8.6E-13 91.5 10.9 128 252-379 13-145 (489)
226 PF03209 PUCC: PUCC protein; 98.8 2E-07 4.2E-12 81.8 13.7 131 58-189 233-364 (403)
227 PRK09584 tppB putative tripept 98.8 9E-08 1.9E-12 89.6 12.4 122 252-374 20-145 (500)
228 COG2807 CynX Cyanate permease 98.7 8.1E-07 1.8E-11 76.2 15.9 140 51-199 225-365 (395)
229 KOG3574|consensus 98.7 1.2E-06 2.7E-11 75.3 16.7 269 33-312 30-323 (510)
230 TIGR00903 2A0129 major facilit 98.7 5.9E-07 1.3E-11 80.7 14.5 127 53-187 211-341 (368)
231 KOG3762|consensus 98.7 7.7E-08 1.7E-12 86.3 7.6 128 60-191 397-525 (618)
232 PF06779 DUF1228: Protein of u 98.6 1.5E-07 3.2E-12 63.4 6.8 80 46-129 4-83 (85)
233 TIGR00885 fucP L-fucose:H+ sym 98.6 2.1E-06 4.6E-11 78.4 16.3 118 65-189 265-382 (410)
234 PF05978 UNC-93: Ion channel r 98.6 1.1E-06 2.4E-11 67.6 11.7 107 74-185 42-148 (156)
235 PRK15403 multidrug efflux syst 98.6 4E-06 8.7E-11 76.8 16.5 130 57-188 241-373 (413)
236 COG0738 FucP Fucose permease [ 98.5 2.5E-06 5.4E-11 74.4 13.6 135 50-191 252-387 (422)
237 KOG2532|consensus 98.5 3.5E-07 7.6E-12 83.8 8.9 170 35-212 259-438 (466)
238 KOG3764|consensus 98.5 3.9E-07 8.4E-12 79.0 8.5 137 52-190 288-431 (464)
239 TIGR00806 rfc RFC reduced fola 98.5 1.4E-06 3.1E-11 78.5 10.6 109 271-380 43-153 (511)
240 COG3104 PTR2 Dipeptide/tripept 98.4 3.9E-06 8.5E-11 75.4 11.7 122 252-374 20-150 (498)
241 KOG3810|consensus 98.4 1.4E-05 3.1E-10 68.1 14.1 314 54-380 25-365 (433)
242 PF12832 MFS_1_like: MFS_1 lik 98.4 1.7E-06 3.7E-11 57.9 7.0 67 42-109 8-74 (77)
243 TIGR01301 GPH_sucrose GPH fami 98.4 1.5E-06 3.3E-11 79.8 8.9 121 254-375 5-148 (477)
244 PF02487 CLN3: CLN3 protein; 98.4 2.3E-05 5E-10 69.7 15.8 107 72-187 62-168 (402)
245 PF03219 TLC: TLC ATP/ADP tran 98.4 0.00012 2.5E-09 67.6 20.8 260 67-330 56-360 (491)
246 PTZ00207 hypothetical protein; 98.3 4.3E-06 9.3E-11 78.6 10.4 109 269-381 43-159 (591)
247 PF12832 MFS_1_like: MFS_1 lik 98.3 4.4E-06 9.5E-11 55.9 7.5 71 257-328 4-74 (77)
248 PF00083 Sugar_tr: Sugar (and 98.2 1.4E-08 3.1E-13 94.2 -7.6 134 53-190 272-413 (451)
249 KOG2816|consensus 98.2 1.6E-05 3.5E-10 72.8 11.5 126 59-189 267-393 (463)
250 KOG1330|consensus 98.2 2.9E-06 6.4E-11 75.2 6.2 127 253-381 33-161 (493)
251 KOG1479|consensus 98.1 0.0002 4.4E-09 63.3 16.1 330 35-377 19-379 (406)
252 PF00854 PTR2: POT family; In 98.1 9.9E-05 2.1E-09 66.6 14.6 109 101-218 2-119 (372)
253 KOG0252|consensus 98.0 3.7E-05 8.1E-10 68.3 9.8 150 34-187 304-467 (538)
254 TIGR00880 2_A_01_02 Multidrug 98.0 5.9E-06 1.3E-10 62.8 4.2 85 295-380 4-90 (141)
255 KOG3762|consensus 98.0 2.7E-05 5.9E-10 70.4 8.1 128 252-381 370-499 (618)
256 KOG2533|consensus 98.0 9.3E-05 2E-09 68.4 11.7 138 36-177 275-419 (495)
257 KOG0254|consensus 97.9 0.0005 1.1E-08 65.0 16.0 128 48-177 309-446 (513)
258 PF06813 Nodulin-like: Nodulin 97.9 0.00011 2.3E-09 61.4 10.1 114 264-381 13-135 (250)
259 TIGR00805 oat sodium-independe 97.9 6E-06 1.3E-10 79.4 2.9 110 271-380 50-211 (633)
260 COG3202 ATP/ADP translocase [E 97.8 0.02 4.4E-07 51.9 22.5 259 59-321 48-354 (509)
261 KOG2615|consensus 97.8 8.4E-05 1.8E-09 64.5 7.1 126 61-190 289-416 (451)
262 KOG3097|consensus 97.8 0.0042 9E-08 53.1 16.6 72 79-155 68-139 (390)
263 PF02487 CLN3: CLN3 protein; 97.7 0.00061 1.3E-08 60.8 11.9 141 40-186 253-395 (402)
264 PF05631 DUF791: Protein of un 97.6 0.00047 1E-08 59.9 9.9 107 252-362 36-142 (354)
265 PF06609 TRI12: Fungal trichot 97.6 0.00095 2.1E-08 62.9 11.5 149 37-187 313-466 (599)
266 TIGR00939 2a57 Equilibrative N 97.5 0.0075 1.6E-07 55.4 16.6 90 125-220 105-194 (437)
267 KOG1237|consensus 97.5 0.0042 9.2E-08 58.7 14.6 164 30-199 33-225 (571)
268 KOG0255|consensus 97.4 0.011 2.4E-07 56.1 17.1 125 59-187 343-467 (521)
269 PF06963 FPN1: Ferroportin1 (F 97.4 0.011 2.3E-07 53.9 15.5 143 38-181 262-411 (432)
270 PRK03612 spermidine synthase; 97.4 0.018 4E-07 54.1 17.6 129 59-190 40-174 (521)
271 PF03092 BT1: BT1 family; Int 97.3 0.0032 6.9E-08 58.0 11.0 126 65-191 251-383 (433)
272 PF07672 MFS_Mycoplasma: Mycop 97.3 0.0024 5.2E-08 52.9 9.0 103 158-266 2-107 (267)
273 KOG3098|consensus 97.0 0.08 1.7E-06 48.5 17.4 103 77-181 287-407 (461)
274 PF13000 Acatn: Acetyl-coenzym 97.0 0.14 3E-06 47.0 18.4 140 37-180 3-172 (544)
275 PF05978 UNC-93: Ion channel r 96.9 0.0077 1.7E-07 46.5 8.5 86 295-380 43-128 (156)
276 KOG2325|consensus 96.9 0.0022 4.8E-08 58.6 6.2 64 127-190 388-452 (488)
277 KOG2563|consensus 96.8 0.0024 5.2E-08 57.1 5.6 137 52-189 284-422 (480)
278 KOG0637|consensus 96.8 0.0014 3E-08 58.6 4.1 125 254-379 33-181 (498)
279 PF06779 DUF1228: Protein of u 96.2 0.036 7.8E-07 37.6 7.1 68 270-339 9-76 (85)
280 PF03137 OATP: Organic Anion T 96.0 0.0018 3.9E-08 61.1 0.0 155 34-189 305-515 (539)
281 TIGR00926 2A1704 Peptide:H+ sy 95.6 0.092 2E-06 50.9 9.8 106 268-374 2-118 (654)
282 TIGR00939 2a57 Equilibrative N 95.5 0.21 4.5E-06 46.1 11.3 112 71-185 309-431 (437)
283 KOG3626|consensus 95.4 0.36 7.7E-06 46.8 12.5 153 35-188 393-649 (735)
284 KOG4830|consensus 95.2 0.00067 1.5E-08 55.7 -5.0 68 240-308 189-256 (412)
285 COG0477 ProP Permeases of the 94.7 0.24 5.2E-06 42.6 9.2 103 274-378 23-132 (338)
286 KOG1479|consensus 94.0 0.76 1.6E-05 41.3 10.5 110 70-182 283-399 (406)
287 PF01733 Nucleoside_tran: Nucl 92.5 0.039 8.5E-07 48.3 0.2 110 73-183 186-305 (309)
288 PF01733 Nucleoside_tran: Nucl 91.9 0.045 9.7E-07 48.0 -0.2 85 294-378 187-285 (309)
289 PF01770 Folate_carrier: Reduc 91.2 2.1 4.5E-05 38.9 9.5 102 68-171 284-385 (412)
290 PF02990 EMP70: Endomembrane p 89.5 4 8.7E-05 38.7 10.5 32 286-317 290-325 (521)
291 KOG3880|consensus 89.2 0.43 9.3E-06 40.9 3.4 102 71-181 64-165 (409)
292 KOG4332|consensus 89.2 6.5 0.00014 33.4 10.0 102 71-173 284-391 (454)
293 PF07672 MFS_Mycoplasma: Mycop 86.4 7 0.00015 32.9 8.7 105 72-177 144-254 (267)
294 KOG3880|consensus 85.4 3.3 7.1E-05 35.8 6.4 65 121-185 337-401 (409)
295 KOG3574|consensus 81.2 9.1 0.0002 34.4 7.6 70 252-325 30-104 (510)
296 KOG2601|consensus 80.8 25 0.00054 31.6 10.1 149 42-191 35-204 (503)
297 COG5336 Uncharacterized protei 78.0 9.6 0.00021 26.9 5.4 35 75-109 48-82 (116)
298 TIGR00769 AAA ADP/ATP carrier 77.5 64 0.0014 30.3 14.7 41 72-113 306-346 (472)
299 PF03219 TLC: TLC ATP/ADP tran 75.1 45 0.00098 31.4 10.9 43 72-115 322-364 (491)
300 KOG1278|consensus 74.3 14 0.0003 34.6 7.1 32 285-316 355-386 (628)
301 COG3559 TnrB3 Putative exporte 72.2 79 0.0017 28.9 15.7 29 141-169 176-206 (536)
302 PRK03612 spermidine synthase; 71.8 50 0.0011 31.5 10.6 55 261-315 22-76 (521)
303 KOG3810|consensus 70.9 13 0.00027 33.1 5.7 98 72-171 274-371 (433)
304 COG2233 UraA Xanthine/uracil p 68.8 55 0.0012 30.3 9.6 121 38-161 20-140 (451)
305 KOG4830|consensus 64.8 8.1 0.00018 32.6 3.3 66 258-324 22-96 (412)
306 PF06645 SPC12: Microsomal sig 61.5 24 0.00052 23.4 4.5 21 166-187 12-32 (76)
307 COG5336 Uncharacterized protei 60.3 41 0.00088 23.9 5.5 20 299-318 52-71 (116)
308 PF02694 UPF0060: Uncharacteri 58.6 17 0.00037 25.7 3.5 50 68-118 53-102 (107)
309 KOG3097|consensus 57.4 35 0.00076 30.1 5.9 64 252-322 28-91 (390)
310 PRK02237 hypothetical protein; 54.9 31 0.00068 24.5 4.3 48 69-117 56-103 (109)
311 PF09527 ATPase_gene1: Putativ 54.8 47 0.001 20.2 5.4 34 77-110 8-41 (55)
312 PF11947 DUF3464: Protein of u 53.1 45 0.00097 25.6 5.3 21 360-380 113-133 (153)
313 TIGR02230 ATPase_gene1 F0F1-AT 51.4 56 0.0012 23.0 5.1 31 80-110 53-83 (100)
314 PF13000 Acatn: Acetyl-coenzym 50.1 2.3E+02 0.0051 26.9 14.1 61 129-189 408-468 (544)
315 PF11947 DUF3464: Protein of u 49.1 85 0.0018 24.2 6.2 51 124-177 95-145 (153)
316 PF11299 DUF3100: Protein of u 48.6 48 0.001 27.4 5.1 49 131-180 176-224 (241)
317 PF13386 DsbD_2: Cytochrome C 46.8 1.5E+02 0.0033 23.9 14.0 32 286-317 147-178 (199)
318 COG0387 ChaA Ca2+/H+ antiporte 45.9 1.7E+02 0.0038 26.2 8.4 28 49-76 236-263 (368)
319 KOG1237|consensus 44.5 1.6E+02 0.0035 28.5 8.8 76 258-333 42-117 (571)
320 PF04281 Tom22: Mitochondrial 44.1 83 0.0018 23.7 5.4 27 150-176 59-85 (137)
321 KOG1277|consensus 43.9 2.7E+02 0.0059 25.9 9.9 23 298-320 336-358 (593)
322 COG2119 Predicted membrane pro 41.9 1.6E+02 0.0035 23.5 6.8 36 79-115 144-179 (190)
323 PF07760 DUF1616: Protein of u 41.7 2.3E+02 0.0051 24.5 10.0 58 129-188 22-79 (287)
324 PRK10599 calcium/sodium:proton 41.6 2.7E+02 0.0058 25.2 9.3 27 50-76 238-264 (366)
325 COG1268 BioY Uncharacterized c 37.8 1.1E+02 0.0024 24.4 5.6 23 76-99 89-111 (184)
326 COG4262 Predicted spermidine s 37.2 3.2E+02 0.0069 24.7 12.0 88 65-153 39-132 (508)
327 PF11368 DUF3169: Protein of u 32.6 3E+02 0.0066 23.2 12.3 17 163-179 11-27 (248)
328 KOG4112|consensus 32.1 1.3E+02 0.0029 20.7 4.4 28 161-189 22-49 (101)
329 PF02694 UPF0060: Uncharacteri 31.9 1E+02 0.0023 21.9 4.0 36 289-324 54-89 (107)
330 KOG1397|consensus 31.3 84 0.0018 28.3 4.3 47 28-74 284-330 (441)
331 PF09930 DUF2162: Predicted tr 31.1 2.1E+02 0.0046 23.7 6.4 53 59-115 121-173 (224)
332 COG0861 TerC Membrane protein 30.3 3.4E+02 0.0075 23.1 16.3 33 131-164 22-54 (254)
333 PF02632 BioY: BioY family; I 29.7 1.8E+02 0.0039 22.3 5.5 25 76-101 60-84 (148)
334 TIGR00986 3a0801s05tom22 mitoc 29.5 1.5E+02 0.0032 22.5 4.7 25 150-174 57-81 (145)
335 COG4769 Predicted membrane pro 28.5 81 0.0018 24.5 3.3 51 79-139 83-133 (181)
336 COG2962 RarD Predicted permeas 28.0 4E+02 0.0087 23.1 7.9 67 248-324 65-132 (293)
337 PRK10263 DNA translocase FtsK; 27.1 7.7E+02 0.017 26.8 10.7 18 173-190 142-159 (1355)
338 PF06422 PDR_CDR: CDR ABC tran 27.0 1.8E+02 0.0038 20.6 4.7 14 195-208 47-60 (103)
339 PF06800 Sugar_transport: Suga 26.6 4.2E+02 0.009 22.8 10.1 29 284-315 160-188 (269)
340 COG2836 Uncharacterized conser 26.4 3.8E+02 0.0082 22.3 15.3 32 286-317 161-192 (232)
341 COG3202 ATP/ADP translocase [E 25.7 5.9E+02 0.013 24.2 13.6 35 83-118 336-370 (509)
342 PF06912 DUF1275: Protein of u 24.9 3.8E+02 0.0082 21.7 15.1 26 165-190 165-190 (209)
343 COG1230 CzcD Co/Zn/Cd efflux s 24.1 4.9E+02 0.011 22.8 13.3 53 57-113 48-100 (296)
344 COG5547 Small integral membran 23.5 1.9E+02 0.0042 17.9 3.6 34 323-356 11-46 (62)
345 PRK02237 hypothetical protein; 23.5 2.2E+02 0.0047 20.4 4.4 36 289-324 56-91 (109)
346 KOG2601|consensus 23.2 6E+02 0.013 23.4 9.4 70 253-322 27-96 (503)
347 PF04341 DUF485: Protein of un 21.5 79 0.0017 21.8 2.0 46 253-298 16-61 (91)
348 PF06808 DctM: DctM-like trans 20.9 6.7E+02 0.015 23.2 10.6 42 147-188 118-160 (416)
349 PF01102 Glycophorin_A: Glycop 20.6 1.2E+02 0.0026 22.4 2.8 12 206-217 71-82 (122)
350 PF05653 Mg_trans_NIPA: Magnes 20.6 3.1E+02 0.0068 24.0 6.0 8 253-260 50-57 (300)
351 PF02990 EMP70: Endomembrane p 20.5 4.7E+02 0.01 25.1 7.6 42 155-199 290-331 (521)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.1e-38 Score=267.82 Aligned_cols=340 Identities=17% Similarity=0.130 Sum_probs=279.0
Q ss_pred ccchhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHH
Q psy8365 27 HHNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIY 106 (381)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~ 106 (381)
.-+++|+.++..+++.+...++.+..++..+|.+.+|.++|.+|+|.+.+.+.+.|.++.++.|.++|| .++|+.+..+
T Consensus 22 ~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr-~npr~fm~~g 100 (448)
T COG2271 22 TYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDR-SNPRYFMAFG 100 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccc-CCCceeehHH
Confidence 345677888999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhh--HH
Q psy8365 107 SVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVA--EP 184 (381)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~ 184 (381)
+++.++..+++.+ +++.+.+.+..++.|..+|..+|++...+++|++++|||+..++++++.++|..+.|++. +.
T Consensus 101 Lilsai~nil~Gf---s~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~ 177 (448)
T COG2271 101 LILSAIVNILFGF---SPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAF 177 (448)
T ss_pred HHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHH
Confidence 9999999887776 789999999999999999999999999999999999999999999999999999999888 55
Q ss_pred HHhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhH-------HHhhh-----cccCcccccc-----ccc
Q psy8365 185 LYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAE-------RILNR-----RNAGETEVAR-----LSD 247 (381)
Q Consensus 185 l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-----~~~~~~~~~~-----~~~ 247 (381)
+..+. +||. .|++.+++..+++++...... ++|++ +..++ +++++++..+ .+.
T Consensus 178 ~~~~~------~w~~--~f~~pgiiaiival~~~~~~r--d~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~Y 247 (448)
T COG2271 178 FAFHG------GWRA--AFYFPGIIAIIVALILLFLLR--DRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKY 247 (448)
T ss_pred HHhcc------chhH--HHHHHHHHHHHHHHHHHHHhC--CCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHH
Confidence 55444 6999 788888877777766554432 22211 11100 1111111112 223
Q ss_pred ccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhh--cchHHHHHH
Q psy8365 248 VKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKT--GRNLFWVFI 325 (381)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~--g~r~~~~~~ 325 (381)
+++ ||.+|.+.+..++.+..-+++..|.|.|+.|..|+|...++...+....+++.|.++.|+++||+ |||.+..+.
T Consensus 248 VL~-Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i 326 (448)
T COG2271 248 VLK-NKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALI 326 (448)
T ss_pred HHc-ChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHH
Confidence 344 89999999999999999999999999999999999999999999999999999999999999998 577776666
Q ss_pred HHHHHHHHHHHHhhccch--hHHHHHHHHHHHHhhhcch--hhhhhhcccCCcccccccC
Q psy8365 326 SLMVSIVCHFMVGHTMID--PHITMVMMGIAYSMVASGL--WPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~--~~~~~~~~p~~~~g~~~g~ 381 (381)
..+...+++..+...+.. .....+++.+|+...+|.. -....|..|++..|++.|+
T Consensus 327 ~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf 386 (448)
T COG2271 327 FMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGF 386 (448)
T ss_pred HHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhch
Confidence 666666666666554433 4555566666766666643 4567899999999999885
No 2
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=1.7e-35 Score=269.24 Aligned_cols=342 Identities=11% Similarity=0.070 Sum_probs=247.3
Q ss_pred hhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHH
Q psy8365 30 IQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVL 109 (381)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~ 109 (381)
+.+|..+.++++.++.+++++...+...|.+++|+|+|+.+.|++.+.+.+++.+++++.|++.|| +|||+++..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~ 82 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAI-IGARRWIAGIMVL 82 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHH-hChHHHHHHHHHH
Confidence 456778888888899999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 110 VVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
..++.+++++ ++|++.+++.|+++|++.+...+....++.|++|+++|++++++++.+.++|..+++.+++.+.+..
T Consensus 83 ~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 159 (412)
T TIGR02332 83 WGIASTATMF---ATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALD 159 (412)
T ss_pred HHHHHHHHHH---hcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9998887765 7999999999999999999999999999999999999999999999999999999999998887531
Q ss_pred hccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhH------HHhhh-------cc-c---Cc----ccc----cc
Q psy8365 190 EKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAE------RILNR-------RN-A---GE----TEV----AR 244 (381)
Q Consensus 190 ~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-------~~-~---~~----~~~----~~ 244 (381)
+.....|||+ .+++.++...+..++.... .++++++ ++.+. ++ + .+ +++ ..
T Consensus 160 ~~~~~~gwr~--~f~~~~~~~l~~~~~~~~~--~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (412)
T TIGR02332 160 GLMALKGWQW--LFLLEGFPSVILGVMTWFW--LDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSM 235 (412)
T ss_pred CCCCccchhH--HHHHHHHHHHHHHHHHhhc--cCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHH
Confidence 1111128999 6655554433333322222 1221110 00000 00 0 00 000 01
Q ss_pred cccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHh-cCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHH
Q psy8365 245 LSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKR-FNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWV 323 (381)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~ 323 (381)
+++++ ++.+|...+..++.....+.+.+|.|.|+++. .|.+..+++.......++..++.++.|+++||+++|+...
T Consensus 236 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~ 313 (412)
T TIGR02332 236 LREIF--TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHT 313 (412)
T ss_pred HHHhc--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHH
Confidence 22222 46788888888888888888899999999873 4678888899999999999999999999999999776533
Q ss_pred HHHHHHHHHHHHHHhhccchhH--HHHHHHHHHHHhhhcchhhhhhhcccCCcccccccC
Q psy8365 324 FISLMVSIVCHFMVGHTMIDPH--ITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
........+.+.+......... ..+.+.+++.....+..+....|.+|+++|++++|+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~ 373 (412)
T TIGR02332 314 ALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAV 373 (412)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHH
Confidence 3333333333332222222121 112222222222233445566788999999988763
No 3
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=7.4e-36 Score=276.43 Aligned_cols=343 Identities=12% Similarity=0.051 Sum_probs=247.8
Q ss_pred hhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHH
Q psy8365 30 IQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVL 109 (381)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~ 109 (381)
+..+..+.+.++.++..+.++..+++..|.+.+|+|+++.+.|++.+.+.+++.+++++.|+++|| +|||+++..+.++
T Consensus 25 ~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~ 103 (467)
T PRK09556 25 KPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADG-KNTKQFLPFLLIL 103 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhc-cCccchHHHHHHH
Confidence 345566777788888899999999999999999999999999999999999999999999999999 9999999888887
Q ss_pred HHHHHHHHHh--hhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHh
Q psy8365 110 VVIGQLVFAL--GAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYK 187 (381)
Q Consensus 110 ~~~~~~~~~~--~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (381)
.+++...+.. ...+++++.+++.|+++|++.+...+...++++||+|+++||+++|+.+.+.++|.++++.+...+.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~ 183 (467)
T PRK09556 104 SAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGAN 183 (467)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHH
Confidence 7766654443 22368999999999999999999999999999999999999999999999999999999888776655
Q ss_pred hhhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHH-hh------hc---cc--Ccccccc----c-ccccc
Q psy8365 188 YVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERI-LN------RR---NA--GETEVAR----L-SDVKH 250 (381)
Q Consensus 188 ~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~---~~--~~~~~~~----~-~~~~~ 250 (381)
..... +||. .+.+.+++..+++++.... .++++++.. .+ +. ++ +++++.+ + ++.++
T Consensus 184 ~~~~~---~~~~--~f~~~g~~~~~~~i~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 256 (467)
T PRK09556 184 YFFDG---HVIG--MFIFPSIIALIIGFIGLRY--GSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLK 256 (467)
T ss_pred hhccC---cchh--HHHHHHHHHHHHHHHHHHh--CCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHc
Confidence 43211 5887 5555555444444333222 122221100 00 00 00 0001111 1 11345
Q ss_pred cCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHH
Q psy8365 251 FPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVS 330 (381)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 330 (381)
+|.+|...+..++.+...++...|.|.|+++.+|++..+++.......++..++.++.|+++||++||+..........
T Consensus 257 -~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~ 335 (467)
T PRK09556 257 -NPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALAL 335 (467)
T ss_pred -ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHH
Confidence 6889999888888888888888999999999999999999999998999999999999999999998876544332222
Q ss_pred HHH-HHHHhhccchhHHHHHHHHHHHHhhh--cchhhhhhhcccCCcccccccC
Q psy8365 331 IVC-HFMVGHTMIDPHITMVMMGIAYSMVA--SGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 331 ~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
... ................++.++..... ........|.+|++.+|++.|+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi 389 (467)
T PRK09556 336 IIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGI 389 (467)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHH
Confidence 211 11222212222222333333332222 2224567799999999998874
No 4
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-34 Score=250.56 Aligned_cols=284 Identities=14% Similarity=0.114 Sum_probs=235.3
Q ss_pred hHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHH
Q psy8365 31 QRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLV 110 (381)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~ 110 (381)
..+..+..+.++.|...........++|++.+|+|+|..+.|++.+.|.+++.++.++...+.|| +.||++++....++
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r-~~Rr~lLl~~l~lF 88 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGR-LERRRLLLGLLALF 88 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cchHHHHHHHHHHH
Confidence 34555666777778788888899999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 111 VIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
.++++++++ ++||+.++++|++.|+..|..++...++..+..||++|++++++...+.+++.++|.+++.++.+.+
T Consensus 89 i~~n~l~al---Ap~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~- 164 (394)
T COG2814 89 IVSNLLSAL---APSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF- 164 (394)
T ss_pred HHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh-
Confidence 999998877 8999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhh
Q psy8365 191 KFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIF 270 (381)
Q Consensus 191 ~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (381)
|||+ .|+.++.+..+..+ ......|+++ .+++++.+..+..+++| +|+.+...+..++.+.+.+
T Consensus 165 -----GWR~--~F~~ia~l~ll~~~----~~~~~lP~~~----~~~~~~~~~~~~~~~l~-~p~v~~~l~~t~l~~~g~F 228 (394)
T COG2814 165 -----GWRA--TFLAIAVLALLALL----LLWKLLPPSE----ISGSLPGPLRTLLRLLR-RPGVLLGLLATFLFMTGHF 228 (394)
T ss_pred -----hHHH--HHHHHHHHHHHHHH----HHHHhCCCcc----CCCCCCcchhHHHHHhc-CchHHHHHHHHHHHHcchh
Confidence 7999 77766653333222 2212222110 11111122222344555 7999999999999999999
Q ss_pred cchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHH
Q psy8365 271 PFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFM 336 (381)
Q Consensus 271 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 336 (381)
...+|+.+++++..|++.+..++....+++++++|+.++|++.|| +.|+.+...........+.+
T Consensus 229 ~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l 293 (394)
T COG2814 229 ALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLAL 293 (394)
T ss_pred hhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 77766454444444333333
No 5
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=4.9e-34 Score=261.77 Aligned_cols=336 Identities=16% Similarity=0.153 Sum_probs=231.8
Q ss_pred hHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhc---CChHHHHHHH---HHhhhhhhHHhhhhhhhhhhhcCchhhhH
Q psy8365 31 QRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMH---LTNAQYMNLY---SWYSWPNVICCFIGGFLIDRVFGIRMGST 104 (381)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~s~~~~g~~~---s~~~~~~~~~~~~~g~l~dr~~G~r~~~~ 104 (381)
+++..+...++..+.+++|...++...|.+.++++ .+..+.+... +...++..++++++|+++|| +||||++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr-~Grr~~l~ 97 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADK-HGRKKSML 97 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHH
Confidence 45556666677888999999999999999999984 5566544444 44455555999999999999 99999999
Q ss_pred HHHHHHHHHHHHHHhhhccchh--------HHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhH
Q psy8365 105 IYSVLVVIGQLVFALGAYVDSL--------FITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGST 176 (381)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~--------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 176 (381)
.+.++++++++++++ ++++ ..+++.|+++|++.|..++...++++|++|+++|+++.++.+.+...|..
T Consensus 98 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~ 174 (432)
T PRK10406 98 ISVCMMCFGSLVIAC---LPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQL 174 (432)
T ss_pred HHHHHHHHHHHHHhh---cCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHH
Confidence 999999999887766 5665 36899999999999999999999999999999999999999988888888
Q ss_pred hhhhhhHHHHhhhhcc--ccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcc
Q psy8365 177 VNMFVAEPLYKYVEKF--GLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVS 254 (381)
Q Consensus 177 ~g~~~~~~l~~~~~~~--~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (381)
+++.+...+....+.. ...|||+ .|++.++ ..++ ...+. ...++.++. +++ ++++..+++++++ +|+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~gWr~--~F~i~~~-~~ll---~~~~~-~~~~e~~~~-~~~--~~~~~~~~~~l~~-~~~ 243 (432)
T PRK10406 175 LALLVVVVLQQTLEDAELREWGWRI--PFALGAV-LAVV---ALWLR-RQLDETSQQ-ETR--ALKEAGSLKGLWR-NRR 243 (432)
T ss_pred HHHHHHHHHHHhCCHHHHhccchHH--HHHHHHH-HHHH---HHHHH-hcCCCCchH-HHh--hhcccccHHHHHh-hHH
Confidence 8887765554322110 0128998 4543322 2222 22221 212221111 111 1112234666777 677
Q ss_pred hhhHHHHHHH-hhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHH
Q psy8365 255 FWMVVVIIVS-YYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVC 333 (381)
Q Consensus 255 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 333 (381)
.+...+...+ ....++...+|.|.|+++.+|.+..+.+.......+...++.++.|+++||++||+..........+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~ 323 (432)
T PRK10406 244 AFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFT 323 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHH
Confidence 7766555444 356677788999999988889999888888888888888889999999999999987655444332222
Q ss_pred HHHH--hhccchhHHHHHHH--H-HHHHhhhcchhhhhhhcccCCcccccccC
Q psy8365 334 HFMV--GHTMIDPHITMVMM--G-IAYSMVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 334 ~~~~--~~~~~~~~~~~~~~--g-~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
.... ............+. + ...+...+..+.+.+|.+|++.|+++.|+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~ 376 (432)
T PRK10406 324 VPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGL 376 (432)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhH
Confidence 2121 11111222211111 1 22233345567889999999999999874
No 6
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1.8e-34 Score=268.62 Aligned_cols=334 Identities=14% Similarity=0.106 Sum_probs=256.1
Q ss_pred hHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHH
Q psy8365 31 QRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLV 110 (381)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~ 110 (381)
++|..+..+++..+...+|.+..+...|.+.+|+|.+.++.+|+.+.+.+++..+.+++|+++|| +|||+++..+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~-~Grk~~l~~~~~~~ 81 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDR-IGFKRLLMLGGTLF 81 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHH
Confidence 35677888888999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcc-cCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 111 VIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWF-KGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
.++++++.. ++|++.++++|+++|+|.+...+.....+.+++ |+++|++++++......+|..+||.+++.+.++.
T Consensus 82 ~~~~~~~~~---a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~ 158 (495)
T PRK14995 82 GLASLAAAF---SPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHF 158 (495)
T ss_pred HHHHHHHHH---cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 999987776 799999999999999999988888888887776 6789999999999999999999999999998876
Q ss_pred hccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhc----------------------c-----------
Q psy8365 190 EKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRR----------------------N----------- 236 (381)
Q Consensus 190 ~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~----------- 236 (381)
|||| .|++...+. ++.++...... .++++++..+.+ +
T Consensus 159 ------gwr~--~f~i~~~~~-~~~~~l~~~~l-~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 228 (495)
T PRK14995 159 ------YWGS--VFLINVPIV-LVVMGLTARYV-PRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLT 228 (495)
T ss_pred ------ChHH--HHHHHHHHH-HHHHHHHHHhC-CCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHH
Confidence 7999 555443322 22222222221 111111000000 0
Q ss_pred ---------------cCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHH
Q psy8365 237 ---------------AGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTI 301 (381)
Q Consensus 237 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 301 (381)
.+.+++.-..++++ +|.++...+..++.....++...+.|.|+++.+|+++.++|.......++
T Consensus 229 ~~~~~~~l~~f~~~e~~~~~p~~~~~lf~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~ 307 (495)
T PRK14995 229 LLTGALLLGLFIRTQLAASRPMIDMRLFT-HRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVA 307 (495)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcCHHHhC-CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 00000000113344 57777777777777777777788899999999999999999999999999
Q ss_pred HhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh-----ccchhHHHHHHHHHHHHhhhcchhhhhhhcccCCccc
Q psy8365 302 SAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH-----TMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLG 376 (381)
Q Consensus 302 ~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g 376 (381)
..++.++.|++.||+|+|+.+ ..+..+..++...+.. +.+......++.|++.+...+.......+..|+++++
T Consensus 308 ~~~~~~~~g~l~~r~g~~~~~-~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g 386 (495)
T PRK14995 308 SGFSGPIAGILVSRLGLRLVA-TGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAA 386 (495)
T ss_pred HHHHHHHHHHHHHHcCchHHH-HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcc
Confidence 999999999999999987764 4444444344333221 1122344567778888888777788888999999998
Q ss_pred cccc
Q psy8365 377 TAYG 380 (381)
Q Consensus 377 ~~~g 380 (381)
.+.|
T Consensus 387 ~~~~ 390 (495)
T PRK14995 387 AAGA 390 (495)
T ss_pred hHHH
Confidence 8765
No 7
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=1.5e-34 Score=257.82 Aligned_cols=313 Identities=10% Similarity=0.034 Sum_probs=216.4
Q ss_pred hhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccch
Q psy8365 46 SYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDS 125 (381)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (381)
+...+..+++..|.+++|+|+|+++.|++.+.+.+++.+++++.|+++|| +|||+++..+......+.. .... .+|
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~-~~~~--~~~ 78 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDR-AFKRWFLFGSLATFAAAAG-RLLD--PFN 78 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccchHHHHHHHHHHHHHHH-HHHH--hcc
Confidence 44556677889999999999999999999999999999999999999999 9999876655544444322 2221 379
Q ss_pred hHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHH
Q psy8365 126 LFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLL 205 (381)
Q Consensus 126 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~ 205 (381)
++.+++.|+++|++.+. .+.....++|++|+|+|++++++.+.+..+|.++++++++.+.+.. |||+ .++.
T Consensus 79 ~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~------gWr~--~f~~ 149 (368)
T TIGR00903 79 YEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG------GLQL--LIIP 149 (368)
T ss_pred HHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc------chHH--HHHH
Confidence 99999999999999875 5556666799999999999999999999999999999999987754 7999 6666
Q ss_pred HHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcC
Q psy8365 206 LAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFN 285 (381)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 285 (381)
.+++..+..++.... .+++++++ ++..+.++...+++++++ +|.+|...+..++.....+.+.+|+|+|+++ .|
T Consensus 150 ~~~l~~~~~~~~~~~--lp~~p~~~--~~~~~~~~~~~~~~~ll~-~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g 223 (368)
T TIGR00903 150 IAAVAAAGIILVLAA--LPALPFQA--AEGFGFKDAVKEFGALAG-RKDLWIIGAILGFGVALFDNLAIWLEAALRP-AG 223 (368)
T ss_pred HHHHHHHHHHHHHHH--cCCCCCCC--CCCcchHHHHHHHHHHHc-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CC
Confidence 565444433322221 12211111 100000111124566777 7999999999999999999999999999976 67
Q ss_pred CChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcc---hHHHHHHHHHHHHHHHHHHhhccch--hHHHHHHHHHHHHhhhc
Q psy8365 286 LDSDAANRLNSIVYTISAFLSPLMGLVVDKTGR---NLFWVFISLMVSIVCHFMVGHTMID--PHITMVMMGIAYSMVAS 360 (381)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~---r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~ 360 (381)
++.. .+.......+.+.++. +++.||..| |+....................... ......+.+++.....+
T Consensus 224 ~s~~-~~~~~~l~~~~g~~g~---~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 299 (368)
T TIGR00903 224 LEDI-AGDAVALAILAGLIGV---AVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYA 299 (368)
T ss_pred CChH-HHHHHHHHHHHHHHHH---HHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHH
Confidence 8764 5666666666555554 678887754 3332322222222222222322111 12222223333333446
Q ss_pred chhhhhhhcccCCcccccccC
Q psy8365 361 GLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 361 ~~~~~~~~~~p~~~~g~~~g~ 381 (381)
..+++.+|.+|++.||++.|+
T Consensus 300 ~~~~~~~~~~p~~~rgt~~G~ 320 (368)
T TIGR00903 300 IIMDWIGKFCDKELHGKAAGA 320 (368)
T ss_pred HHHHHHHHhcchhhcCcccch
Confidence 678899999999999999874
No 8
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=1.6e-33 Score=256.96 Aligned_cols=336 Identities=14% Similarity=0.063 Sum_probs=245.2
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHH
Q psy8365 28 HNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYS 107 (381)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~ 107 (381)
+.+++|..+.+.++..+.+.++....+...|.+.+++|.|+++.|++.+.+.++..+++++.|+++|| +|||+++..+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~ 87 (406)
T PRK11551 9 SSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADR-IGRKRILIVSV 87 (406)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHH
Confidence 34477888888888899999999999999999999999999999999999999999999999999999 99999999998
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHh
Q psy8365 108 VLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYK 187 (381)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (381)
++..++.+++.. +++++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+.+..+|..+++.++..+.+
T Consensus 88 ~~~~~~~~~~~~---~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 164 (406)
T PRK11551 88 ALFGLFSLATAQ---AWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG 164 (406)
T ss_pred HHHHHHHHHHHH---hccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 888887776655 78999999999999999999999999999999999999999999999999999999988876655
Q ss_pred hhhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCccccccccccccc--CcchhhHHHHHHHh
Q psy8365 188 YVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHF--PVSFWMVVVIIVSY 265 (381)
Q Consensus 188 ~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 265 (381)
.. +||+ .+++.++...+..++ .... ..++++++ .++ +++++++...++.++. +++.+......++.
T Consensus 165 ~~------~~~~--~~~~~~~~~~~~~~~-~~~~-l~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (406)
T PRK11551 165 DA------AWRH--IFYVGGVGPLLLVPL-LMRW-LPESRAFA-QAA-GAGKQRAPVLRALFGEGRATATLLLWISYFFT 232 (406)
T ss_pred cc------CHHH--HHHHHHHHHHHHHHH-HHHh-CCCChhHH-hcc-CcchhhhhhHHHHhhhhhhhHHHHHHHHHHHH
Confidence 43 6998 555444322222211 1111 12222111 111 1111111111122220 23334444444455
Q ss_pred hhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhccc--h
Q psy8365 266 YTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMI--D 343 (381)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--~ 343 (381)
....+....|.|.|+++ .|.++.+.+...+...++.++++++.|++.||+++|+.+.. +......++........ .
T Consensus 233 ~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 310 (406)
T PRK11551 233 LIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLL-IYAGILASLAALAAAPSFAG 310 (406)
T ss_pred HHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-HHHHHHHHHHHHHhcCcHHH
Confidence 55566677788988876 79999999999999999999999999999999998887554 33322333333332221 2
Q ss_pred hHHHHHHHHHHHHhhhcchhhhhhhcccCCcccccccC
Q psy8365 344 PHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 344 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
..+..++.+++.....+..+++..|.+|+++|+++.|+
T Consensus 311 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 348 (406)
T PRK11551 311 MLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGA 348 (406)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhH
Confidence 22333445555555667778899999999999998763
No 9
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.1e-33 Score=256.49 Aligned_cols=325 Identities=13% Similarity=0.109 Sum_probs=235.5
Q ss_pred hHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHH
Q psy8365 31 QRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLV 110 (381)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~ 110 (381)
++|..+..+.+..+..........+..|.+.+|+|.|+++.|++.+.+.+++.+++++.|++.|| +||||++..+.++.
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~ 84 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSN-VERRKLLIGLFVLF 84 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CChHHHHHHHHHHH
Confidence 34544444444444333333345566799999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 111 VIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
+++.+.+.. ++|++.+++.|+++|++.+...+...+++.|++|+|+|++++++...+.++|..++|++++.+.++.
T Consensus 85 ~~~~~~~~~---~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~- 160 (390)
T PRK03545 85 IASHVLSAL---AWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL- 160 (390)
T ss_pred HHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh-
Confidence 988887665 7999999999999999988888999999999999999999999999999999999999999887765
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhh
Q psy8365 191 KFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIF 270 (381)
Q Consensus 191 ~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (381)
|||+ .++..+++..+..+... ...++++ + +++++..+.++.++ +|+++......++.....+
T Consensus 161 -----gw~~--~f~~~~~~~~l~~~~~~---~~~~~~~-~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 222 (390)
T PRK03545 161 -----GWRT--TFLAIGGGALITLLLLI---KLLPLLP-S------EHSGSLKSLPLLFR-RPALVSLYLLTVVVVTAHF 222 (390)
T ss_pred -----cHHH--HHHHHHHHHHHHHHHHH---HhCCCCC-C------CCcchHHHHHHHHh-CcHHHHHHHHHHHHHHHHH
Confidence 7998 56555543332222111 1111111 1 00111123445566 6777766666666555556
Q ss_pred cchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhcc--chhHHHH
Q psy8365 271 PFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTM--IDPHITM 348 (381)
Q Consensus 271 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 348 (381)
....+.++|+++..|.++.+.+.......+++++++++.|++.||+++|.. .............+..... +......
T Consensus 223 ~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 301 (390)
T PRK03545 223 TAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL-LIAIALLLVCLLLLLPAANSEWHLSVLS 301 (390)
T ss_pred HHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 666788888888889999999999999999999999999999999987754 3333333322222222212 2233345
Q ss_pred HHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 349 VMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 349 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
++.|++.....+.......|..| +.+++++|
T Consensus 302 ~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g 332 (390)
T PRK03545 302 IFWGIAIMCIGLAMQVKVLKLAP-DATDVAMA 332 (390)
T ss_pred HHHHHHHhcchHHHHHHHHHhCC-CcHHHHHH
Confidence 55666666556666777778776 46777655
No 10
>KOG4686|consensus
Probab=100.00 E-value=5.5e-35 Score=235.50 Aligned_cols=357 Identities=48% Similarity=0.877 Sum_probs=317.6
Q ss_pred CCccchhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhH
Q psy8365 25 HPHHNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGST 104 (381)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~ 104 (381)
.|....+|...+..+|+..+.+++.....+..+.+.++|.+++.++..++.++|.....+..+++|++.||.+|-|..-+
T Consensus 35 ~PS~l~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gti 114 (459)
T KOG4686|consen 35 IPSALGHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTI 114 (459)
T ss_pred cchhhhhHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHH
Confidence 44556678888999999999999999999999999999999999999999999999999999999999998789999888
Q ss_pred HHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHH
Q psy8365 105 IYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEP 184 (381)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 184 (381)
+-+....+|.++++..+..+.+|++..+|++.|+|.....++.+++...|+..||.+.++|+......+|..+-..+.++
T Consensus 115 i~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ 194 (459)
T KOG4686|consen 115 ILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPF 194 (459)
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHH
Confidence 88888899999998888889999999999999999888888999999999999999999999999999999999999999
Q ss_pred HHhhhhccc-cccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHH
Q psy8365 185 LYKYVEKFG-LIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIV 263 (381)
Q Consensus 185 l~~~~~~~~-~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (381)
+.+..+... ..|=..++....++..++...+++....-+.+++.++..+.++....+..+..+...+.|.+|.+.+.++
T Consensus 195 ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAerilh~e~g~~Ge~pkLtdv~~f~ppfw~~~iicv 274 (459)
T KOG4686|consen 195 LYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERILHLEEGFLGEEPKLTDVNTFYPPFWVLVIICV 274 (459)
T ss_pred HHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhcCcccCCcccccccccCccHHHHHHHHH
Confidence 988765431 1133444455566667788888887777778888887777777776777777788777899999999999
Q ss_pred HhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhccch
Q psy8365 264 SYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMID 343 (381)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 343 (381)
+.+...+.+.+..|.++++++|+|+..++.+.+.....+.+.+++.|.++||.|++..++..+.+..+.+-..+.++.+.
T Consensus 275 ~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~ls 354 (459)
T KOG4686|consen 275 LYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLS 354 (459)
T ss_pred HHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999998888888888888888888899
Q ss_pred hHHHHHHHHHHHHhhhcchhhhhhhcccCCcccccccC
Q psy8365 344 PHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 344 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
++..+.++|+.+.+.....|+.++.++|+++.|+++|+
T Consensus 355 Py~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf 392 (459)
T KOG4686|consen 355 PYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGF 392 (459)
T ss_pred HHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHH
Confidence 99999999999999888889999999999999999873
No 11
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=3.4e-33 Score=255.37 Aligned_cols=345 Identities=12% Similarity=0.083 Sum_probs=249.2
Q ss_pred ccchhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHH
Q psy8365 27 HHNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIY 106 (381)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~ 106 (381)
..++.....+..++...+...+.+...++..|.+++++|+|+.+.|++.+.+.+++.+++++.|++.|| +|||+++..+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr-~G~r~~l~~g 97 (438)
T PRK10133 19 GQSRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKK-LSYKAGIITG 97 (438)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHH
Confidence 333445556666677777788888889999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHH
Q psy8365 107 SVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLY 186 (381)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 186 (381)
..+++++.+++.....+++++.++++|+++|+|.+...+..+.++.|+.|+++|.+.+++.+..+.+|..+++.+++.+.
T Consensus 98 ~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 98 LFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998876433457899999999999999999999999999999887777777899999999999999999987765
Q ss_pred hhh------------------hccc--cccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccc
Q psy8365 187 KYV------------------EKFG--LIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLS 246 (381)
Q Consensus 187 ~~~------------------~~~~--~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (381)
... +++. ..+||+ .++....+..++.+ +......++.+++.++++++.+...+.+
T Consensus 178 ~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~--~f~~~~~v~~~~~~---~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 252 (438)
T PRK10133 178 LSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQT--PYMIIVAIVLLVAL---LIMLTKFPALQSDNHSDAKQGSFSASLS 252 (438)
T ss_pred hcCCcccchhhhhccChhhHHHHHHHHHHHHHH--HHHHHHHHHHHHHH---HHHHhcCCCCCccccccccccchhhhHH
Confidence 111 0000 014555 33332222222221 1111111211110000000111112234
Q ss_pred cccccCcchhhHHHHHHHhhhhhhcchhhHHHHH-HHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHH
Q psy8365 247 DVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELF-VKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFI 325 (381)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~ 325 (381)
++++ +|.++...+..++..........|.+.|+ ++.+|.++.+++.......++.+++++..+++.||+++|+.+...
T Consensus 253 ~ll~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~ 331 (438)
T PRK10133 253 RLAR-IRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAY 331 (438)
T ss_pred HHHh-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 5556 68877777777777777777778888885 566899999999999999999999999999999999998885554
Q ss_pred HHHHHHHHHHHHhh-ccchhHHHHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 326 SLMVSIVCHFMVGH-TMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 326 ~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
..... ..+.+... ........+.+.+++.+...|..++...|..|++ .+++.+
T Consensus 332 ~~~~~-~~~~~~~~~~~~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~ 385 (438)
T PRK10133 332 ALIAM-ALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSS 385 (438)
T ss_pred HHHHH-HHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchh
Confidence 33333 33333222 2223345667789999999999999999988764 455543
No 12
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=4e-33 Score=254.38 Aligned_cols=339 Identities=15% Similarity=0.115 Sum_probs=241.7
Q ss_pred chhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHH
Q psy8365 29 NIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSV 108 (381)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~ 108 (381)
++++|..+...++.++.+.++....++..|.+++++|.++.+.+++.+.+.++..+++++.|+++|| +|||+++..+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~~~~~~~ 85 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDR-YGRRLPMVTSIV 85 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHH
Confidence 4567777888888999999999999999999999999999999999999999999999999999999 999999999998
Q ss_pred HHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhh
Q psy8365 109 LVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKY 188 (381)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (381)
+.+++.+++.. +++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+.
T Consensus 86 ~~~~~~~~~~~---~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~ 162 (405)
T TIGR00891 86 LFSAGTLACGF---APGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPV 162 (405)
T ss_pred HHHHHHHHHHH---hccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88888776655 789999999999999999999999999999999999999999999999999999999999888776
Q ss_pred hhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhH-HHhhhcccC-cc--------cc---ccccc----cccc
Q psy8365 189 VEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAE-RILNRRNAG-ET--------EV---ARLSD----VKHF 251 (381)
Q Consensus 189 ~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~--------~~---~~~~~----~~~~ 251 (381)
.+. +||+ .+.. +++..++.++ .....+++++ ++.++++++ ++ +. ...++ .++.
T Consensus 163 ~~~----~w~~--~f~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (405)
T TIGR00891 163 WGD----GWRA--LFFI-SILPIIFALW---LRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQS 232 (405)
T ss_pred cCc----cHHH--HHHH-HHHHHHHHHH---HHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhh
Confidence 531 4998 4433 3322222222 1111121111 110000000 00 00 00000 0000
Q ss_pred Ccc----hhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHH
Q psy8365 252 PVS----FWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISL 327 (381)
Q Consensus 252 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~ 327 (381)
.++ +...................+.|.|+.+..|.+..+.+...+...++.+++.++.+++.||++||+.+.....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~ 312 (405)
T TIGR00891 233 AGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLL 312 (405)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHH
Confidence 011 2222233333344444566778999988899999999999999999999999999999999999887554444
Q ss_pred HHHHHHHHHHhhccch--hHHHHHHHHHHHHhhhcchhhhhhhcccCCcccccccC
Q psy8365 328 MVSIVCHFMVGHTMID--PHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 328 ~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
................ ..+...+.+.......+....+.+|.+|+++||+++|+
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 368 (405)
T TIGR00891 313 AGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGF 368 (405)
T ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhH
Confidence 3322222222222211 12222333444444556677889999999999998763
No 13
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=1.2e-32 Score=249.43 Aligned_cols=323 Identities=12% Similarity=0.056 Sum_probs=235.4
Q ss_pred HHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHH
Q psy8365 32 RVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVV 111 (381)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~ 111 (381)
.|.....++...+... .....++..|.+++|+|+|+++.|++.+.+.+++.+++++.|+++|| +|||+++..+..+.+
T Consensus 8 ~~~~~~~~~~~~~~~~-~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr-~G~r~~l~~~~~l~~ 85 (393)
T PRK09705 8 NFMLLVLVLIGLNMRP-LLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQH-VSERRSVAISLLLIA 85 (393)
T ss_pred HHHHHHHHHHHHHcch-hhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCchHHHHHHHHHHH
Confidence 3444444443333222 22677889999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhc
Q psy8365 112 IGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEK 191 (381)
Q Consensus 112 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 191 (381)
++.+.+.+ ++|++.++++|+++|++.+...+....++.|++| ++|+++++++..+...|..+++.+++.+.++..
T Consensus 86 ~~~~~~~~---a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~- 160 (393)
T PRK09705 86 VGALMREL---YPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSE- 160 (393)
T ss_pred HHHHHHHH---CcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 99997776 8999999999999999999999999999999997 889999999999999999999999988877642
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhc
Q psy8365 192 FGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFP 271 (381)
Q Consensus 192 ~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (381)
+||+ .+.+.+.. .++.+... +...++++++ ++++ +.+.++.++ +++.|...+..++....+..
T Consensus 161 ----~w~~--~~~~~~~~-~~~~~~~~--~~~~~~~~~~-----~~~~--~~~~~~~l~-~~~~~~l~~~~~~~~~~~~~ 223 (393)
T PRK09705 161 ----TWYQ--TLAWWALP-AVVALFAW--WWQSAREVAS-----SHKT--TTTPVRVVF-TPRAWTLGVYFGLINGGYAS 223 (393)
T ss_pred ----CHHH--HHHHHHHH-HHHHHHHH--HHHhcCCCcc-----ccCC--CcCCccccc-CHhHHHHHHHHHHHHHHHHH
Confidence 6998 44333322 22222111 1111111110 0111 112233444 57778777777777777778
Q ss_pred chhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHh-hccchhHHHHHH
Q psy8365 272 FVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVG-HTMIDPHITMVM 350 (381)
Q Consensus 272 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 350 (381)
..+|.|.|+++ +|.+..+++...+...++.++++++.+++.||++||+..... ..+...+..... ...........+
T Consensus 224 ~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~l 301 (393)
T PRK09705 224 LIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLA-LVLQLVGFCGFIWLPLQLPVLWAMV 301 (393)
T ss_pred HHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHH-HHHHHHHHHHHHHccchHHHHHHHH
Confidence 88999999987 799999999999999999999999999999999988775543 333333333322 222222233445
Q ss_pred HHHHHHhhhcchhhhhhhccc-CCccccccc
Q psy8365 351 MGIAYSMVASGLWPLIALVIP-EYQLGTAYG 380 (381)
Q Consensus 351 ~g~~~~~~~~~~~~~~~~~~p-~~~~g~~~g 380 (381)
.+++.+...+.......+..+ ++++|+++|
T Consensus 302 ~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g 332 (393)
T PRK09705 302 CGLGLGGAFPLCLLLALDHSVQPAIAGKLVA 332 (393)
T ss_pred HHHhccchHHHHHHHHHhhcCCHHHHHHHHH
Confidence 566666666666666666664 567777665
No 14
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=3.5e-33 Score=256.13 Aligned_cols=336 Identities=15% Similarity=0.090 Sum_probs=241.3
Q ss_pred hhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHH
Q psy8365 30 IQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVL 109 (381)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~ 109 (381)
+.++.......+.++..+++....+...|.+.+++|+|+.+.|++.+.+.+++.+++++.|++.|| +|||+.+.++.++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~~~~~~~~ 97 (434)
T PRK11663 19 YWRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDR-SNARYFMGIGLIA 97 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhh-cCCchhHHHHHHH
Confidence 445566666677778888888888899999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 110 VVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
.+++.+++.. +++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+.++|..+++.+++.+.+..
T Consensus 98 ~~~~~~~~~~---~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 174 (434)
T PRK11663 98 TGIINILFGF---SSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY 174 (434)
T ss_pred HHHHHHHHHH---HhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 9888876665 7899999999999999999889999999999999999999999999999999999999999887754
Q ss_pred hccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhh-------h-c---ccCccccccccc-----ccccCc
Q psy8365 190 EKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILN-------R-R---NAGETEVARLSD-----VKHFPV 253 (381)
Q Consensus 190 ~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~---~~~~~~~~~~~~-----~~~~~~ 253 (381)
|||+ .+++.+++..+..++.... .++++++...+ + + +++++++.+.++ .++ ++
T Consensus 175 ------gw~~--~f~~~~i~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 243 (434)
T PRK11663 175 ------GWRY--GMMIAGIIAIVVGLFLCWR--LRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLL-NP 243 (434)
T ss_pred ------cHHH--HHHHHHHHHHHHHHHHHHH--cCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhc-Ch
Confidence 7998 5555554333333222221 22222111000 0 0 000001112222 233 57
Q ss_pred chhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhh--cchHHH-HHH--HHH
Q psy8365 254 SFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKT--GRNLFW-VFI--SLM 328 (381)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~--g~r~~~-~~~--~~~ 328 (381)
.+|...+..++.+.......+|.|.|+++.+|++..+++...+...+++.+++++.|++.||+ ++|+.. ... +..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~ 323 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGIL 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHH
Confidence 788887777777777777888999999888999999999999999999999999999999998 333332 221 222
Q ss_pred HHHHHHHHHhhccchhHHHHHHHHHHHHhhh--cchhhhhhhcccCCcccccccC
Q psy8365 329 VSIVCHFMVGHTMIDPHITMVMMGIAYSMVA--SGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
....++..... ..........++++..... ........|..|+++||++.|+
T Consensus 324 ~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 377 (434)
T PRK11663 324 LSVGSLWLMPF-ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGF 377 (434)
T ss_pred HHHHHHHHccc-ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHH
Confidence 22222222211 1222222233344433322 2334567899999999988763
No 15
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=3.2e-34 Score=256.62 Aligned_cols=327 Identities=20% Similarity=0.297 Sum_probs=245.3
Q ss_pred HHHHHhhhhhhcCchhhHH-HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHH
Q psy8365 40 CLLGFGSYFCYDNPSSLEE-HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFA 118 (381)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~ 118 (381)
++..+...++.....+..| .+.+++|.|+.+.+++.+.+.++..+++++.|+++|| +|||+++..+.++.+++.++..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDR-FGRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHH-S-HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCeeeEeehhhhhhhHHHHhh
Confidence 3455666667777888888 8999999999999999999999999999999999999 9999999999999988855444
Q ss_pred hhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccch
Q psy8365 119 LGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQ 198 (381)
Q Consensus 119 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr 198 (381)
+ +++++.+++.|++.|++.+...+...+++.|++|+|+|++++++.+...++|..+++.+++.+.+.. +||
T Consensus 81 ~---~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------~~~ 151 (352)
T PF07690_consen 81 F---ASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF------GWR 151 (352)
T ss_dssp H---HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC------HHC
T ss_pred h---hhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc------ccc
Confidence 3 4777799999999999999999999999999999999999999999999999999999999887665 699
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhccc---Ccccccc-cccccccCcchhhHHHHHHHhhhhhhcchh
Q psy8365 199 TLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNA---GETEVAR-LSDVKHFPVSFWMVVVIIVSYYTSIFPFVS 274 (381)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (381)
+ .+++.+++..+..+ ....+...++++++..+++++ ++++..+ ++++++ +|.+|......++..........
T Consensus 152 ~--~~~~~~~~~~~~~i-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 227 (352)
T PF07690_consen 152 W--AFLISAILSLIAAI-LFILFLPEPPPPRERESPKESESKKPKPLKPGFKSLFK-NPVLWILLIAFFLFFFVFSGFSF 227 (352)
T ss_dssp C--HHHHHHHHHHHHHH-HHHCCC---STTTT--SSTTTT--HHHCCCH-CTHHHH-HHCCHHHHHHHHHHHHHHHHHHH
T ss_pred c--ccccccchhhhhhh-hHhhhhhhcccccccccccccccccccccccccccccc-cchhhhhhhhhhHHHHHHHHhhc
Confidence 8 55555543333322 211222222222211111111 1111122 455555 57677555555666567777888
Q ss_pred hHHHHHHHhcCCC-hhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh--c--cchhHHHHH
Q psy8365 275 LAQELFVKRFNLD-SDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH--T--MIDPHITMV 349 (381)
Q Consensus 275 ~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~ 349 (381)
+.|.|+++.+|.+ ..+.+...+...+.+.++.++.|++.||+++|+..........+....+... . ........+
T Consensus 228 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (352)
T PF07690_consen 228 FLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALF 307 (352)
T ss_dssp HHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHH
T ss_pred ccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 9999878889999 7899999999999999999999999999998777555444444334333322 1 123344566
Q ss_pred HHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 350 MMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 350 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
+.|++.+...+...++..|..|++++|++.|
T Consensus 308 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g 338 (352)
T PF07690_consen 308 LIGFGFGIVFPILFSLIQELVPPEYRGTAFG 338 (352)
T ss_dssp HHHHHHHHHCHHHHHHHHCCCHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 7788888888999999999999999998876
No 16
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=2.3e-32 Score=252.93 Aligned_cols=338 Identities=16% Similarity=0.230 Sum_probs=231.1
Q ss_pred HHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHH
Q psy8365 33 VLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVI 112 (381)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~ 112 (381)
+..+...+...+...++.....+..|.+.+++|+|.++.+++.+.+.+++.+++++.|+++|| +|||+++..+.++.++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~G~r~~~~~~~~~~~~ 113 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDL-YGPRYGSAFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHH
Confidence 444445555566666666677888899999999999999999999999999999999999999 9999999998888888
Q ss_pred HHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcc
Q psy8365 113 GQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKF 192 (381)
Q Consensus 113 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 192 (381)
+.++... +++++.+++.|++.|++.+.. +....+++|++|+++|++++++.....++|..+++.+.+.+.......
T Consensus 114 ~~~~~~~---~~s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~ 189 (476)
T PLN00028 114 AVFCMSL---VSSATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDA 189 (476)
T ss_pred HHHHHHH---hcCHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7765555 789999999999999987654 445678899999999999999998888888888877766554322110
Q ss_pred ---ccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHH--HhhhcccCccc--ccccccccccCcchhhHHHHHHHh
Q psy8365 193 ---GLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAER--ILNRRNAGETE--VARLSDVKHFPVSFWMVVVIIVSY 265 (381)
Q Consensus 193 ---~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 265 (381)
...|||+ .+++.+++..+..++.. .+ ..++++.+ +.+++.+.+++ ...+++.++ ++++|.+.+..+..
T Consensus 190 ~~~~~~gWr~--~f~i~g~l~l~~~l~~~-~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 264 (476)
T PLN00028 190 GAPSFTAWRI--AFFVPGLLHIIMGILVL-TL-GQDLPDGNYRELKKSGTMPKDSFSKVLRYGVT-NYRTWILALTYGYS 264 (476)
T ss_pred CCcchhhhHH--HHHHHHHHHHHHHHHHH-HH-cCcCCCCchhhHHhcCccccccHHHHHHHHHc-CchhHHHHHHHHHH
Confidence 1127999 66666665444433322 22 11222111 00111100111 112334444 67788777776666
Q ss_pred hhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcch------HHHHHHHHHHHHHHHHHHhh
Q psy8365 266 YTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRN------LFWVFISLMVSIVCHFMVGH 339 (381)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r------~~~~~~~~~~~~~~~~~~~~ 339 (381)
........++.|.|+.+.+|+++.+++.+.+...+++.+++++.|+++||++|| +........+..+...+...
T Consensus 265 ~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~ 344 (476)
T PLN00028 265 FGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGR 344 (476)
T ss_pred HHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcc
Confidence 666666778899999888899999999999999999999999999999999865 22222222222222222222
Q ss_pred ccc--hhHHHHHHHHHHHHhhhcchhhhhhhcccCCcccccccC
Q psy8365 340 TMI--DPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 340 ~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
... .....+++++++.+...+..+++..+..| +.+|++.|+
T Consensus 345 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~ 387 (476)
T PLN00028 345 ANSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGL 387 (476)
T ss_pred cchHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhh
Confidence 211 12233445555555555566777777655 568887764
No 17
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=1.2e-32 Score=252.84 Aligned_cols=336 Identities=12% Similarity=0.145 Sum_probs=229.8
Q ss_pred HHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHH-HHh-----hhhhhHHhhhhhhhhhhhcCchhhhHH
Q psy8365 32 RVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLY-SWY-----SWPNVICCFIGGFLIDRVFGIRMGSTI 105 (381)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~-s~~-----~~~~~~~~~~~g~l~dr~~G~r~~~~~ 105 (381)
|++.....++..+.+++|+...+...|.+.+|++.++.+.+.+. +.. .++..+++++.|+++|| +||||.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr-~Grr~~l~~ 91 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDR-VGRRKGLIV 91 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhh-hchHHHHHH
Confidence 44467777888999999999999999999999999887765433 322 23334688999999999 999999999
Q ss_pred HHHHHHHHHHHHHhhhccchhH--------HHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHh
Q psy8365 106 YSVLVVIGQLVFALGAYVDSLF--------ITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTV 177 (381)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 177 (381)
+.++..++.+++.+ +++++ .+++.|+++|++.+...+....+++|++|+++|++++++.....++|..+
T Consensus 92 ~~~~~~~~~~l~~~---~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~ 168 (434)
T PRK15075 92 TLSIMASGTLLIAF---VPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVF 168 (434)
T ss_pred HHHHHHHHHHHHHh---CCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHH
Confidence 99999999887766 67776 46899999999999999989999999999999999999999999999888
Q ss_pred hhhhhHHHHhhhhc--cccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcch
Q psy8365 178 NMFVAEPLYKYVEK--FGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSF 255 (381)
Q Consensus 178 g~~~~~~l~~~~~~--~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (381)
++.+++.+...... ....|||+ .+++ +++. ..+ ........+++++..++ +++++.+..+++..+ +++.
T Consensus 169 g~~~g~~l~~~~~~~~~~~~gWr~--~f~~-~~~~---~~~-~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~-~~~~ 239 (434)
T PRK15075 169 AALLGYLLNQWLSPAQMAEWGWRI--PFLI-GCLI---VPF-IFLIRRSLEETEEFLAR-KHRPSMREIFRSLAA-NWRI 239 (434)
T ss_pred HHHHHHHHHHhCCHHHHhccchHH--HHHH-HHHH---HHH-HHHHHHhcCCCHHHHHh-hhccccccHHHHHHH-hHHH
Confidence 88888776543211 00128998 4433 2211 111 11111111221111111 111111111222223 3344
Q ss_pred hhH-HHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHH
Q psy8365 256 WMV-VVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCH 334 (381)
Q Consensus 256 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 334 (381)
+.. ....+......+....|.|.|+++.+|++..+.+.......++++++.++.|++.||++||+..............
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~ 319 (434)
T PRK15075 240 VLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAY 319 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 433 2333344556667788999999988899999888888888899999999999999999999876554333322222
Q ss_pred HHH--h-hccch--hHHHHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 335 FMV--G-HTMID--PHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 335 ~~~--~-~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
... . ..... ......+.+++.+...+..+.+..|.+|++.|+++.|
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g 370 (434)
T PRK15075 320 PALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFS 370 (434)
T ss_pred HHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchhee
Confidence 111 1 11111 1122344456666666667788999999999999876
No 18
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=6.6e-33 Score=250.44 Aligned_cols=317 Identities=15% Similarity=0.122 Sum_probs=229.6
Q ss_pred hhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccch
Q psy8365 46 SYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDS 125 (381)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (381)
....+...++..|.+.+++|+|+++.|++.+.+.+++.+++++.|+++|| +|||+++..+.++.+++.+++.. ++|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~-~G~r~~~~~~~~~~~~~~~~~~~---~~~ 90 (377)
T TIGR00890 15 TSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADK-FGPRAVAMLGGILYGLGFTFYAI---ADS 90 (377)
T ss_pred HhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHH-cCccchhHHhHHHHHHHHHHHHH---HHH
Confidence 33345677888999999999999999999999999999999999999999 99999999999999988876665 799
Q ss_pred hHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHH
Q psy8365 126 LFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLL 205 (381)
Q Consensus 126 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~ 205 (381)
++.+++.|++.|++.+..++.....+.|++| |+|+++.++...+.++|..+++++.+.+.+.. |||+ .++.
T Consensus 91 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~--~f~~ 161 (377)
T TIGR00890 91 LAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLE------GVPA--AFIY 161 (377)
T ss_pred HHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcc------cHHH--HHHH
Confidence 9999999999999999888888888999997 67999999999999999887666666555432 7998 5655
Q ss_pred HHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcC
Q psy8365 206 LAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFN 285 (381)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 285 (381)
.++...+..+...... +++++++. +++++.++++.+.++.++ +|+++...+..++..........+.++|.+ +.|
T Consensus 162 ~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 236 (377)
T TIGR00890 162 MGIIFLLVIVLGAFLI--GYPPGQLI-KTNIEVSVKDYTVWEMLR-TPQFWVLYLSFFLNAVSGLLLIGLYKPYGQ-SLG 236 (377)
T ss_pred HHHHHHHHHHHHHHhe--ecCchhcc-ccCcccchhhhhHHHHHc-CccHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcC
Confidence 5554433333322221 12221111 111111111223445556 678887776666665555555566677654 478
Q ss_pred CChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhcc-chh---HHHHHHHHHHHHhhhcc
Q psy8365 286 LDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTM-IDP---HITMVMMGIAYSMVASG 361 (381)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~g~~~~~~~~~ 361 (381)
.++.+.+...+...+...+++++.|++.||++||+.+....... ..+........ ... .....+.+++.+...+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 315 (377)
T TIGR00890 237 LSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGIS-AVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISL 315 (377)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH-HHHHHHHHHcccchhHHHHHHHHHHHHHhccchhc
Confidence 88888899999999999999999999999999988755444333 33333333322 111 12234455666656666
Q ss_pred hhhhhhhcccCCcccccccC
Q psy8365 362 LWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 362 ~~~~~~~~~p~~~~g~~~g~ 381 (381)
...+..|.+|+++|+++.|+
T Consensus 316 ~~~~~~~~~~~~~~~~~~g~ 335 (377)
T TIGR00890 316 FPSLVSDIFGPANSAANYGF 335 (377)
T ss_pred cHHHHHHHhhhhhhhhHhHH
Confidence 67889999999999998763
No 19
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=3.9e-32 Score=252.80 Aligned_cols=337 Identities=11% Similarity=0.109 Sum_probs=229.6
Q ss_pred HHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHH----HHH--HHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHH
Q psy8365 34 LALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQ----YMN--LYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYS 107 (381)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~----~g~--~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~ 107 (381)
..+...++..+.+++|...++...|.+.++++.+.++ .+. ..++..+++.+++++.|+++|| +|||+++.++.
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr-~Grr~~l~~~~ 94 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDK-YGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHH
Confidence 3556667788889999999999999999998643322 222 2577889999999999999999 99999999999
Q ss_pred HHHHHHHHHHHhhhccchhHH--------HHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhh
Q psy8365 108 VLVVIGQLVFALGAYVDSLFI--------TILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNM 179 (381)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 179 (381)
++++++++++++ ++|++. +++.|+++|++.|..++...++++|++|+|+||++.++...+..+|..+++
T Consensus 95 ~l~~i~~~~~a~---~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~ 171 (490)
T PRK10642 95 VIMSISTFCIGL---IPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGA 171 (490)
T ss_pred HHHHHHHHHHHh---cccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 999999987776 788864 899999999999999999999999999999999999999998888988888
Q ss_pred hhhHHHHhhhhcc--ccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHH--Hhhh-cc-cC----ccccccccccc
Q psy8365 180 FVAEPLYKYVEKF--GLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAER--ILNR-RN-AG----ETEVARLSDVK 249 (381)
Q Consensus 180 ~~~~~l~~~~~~~--~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~-~~----~~~~~~~~~~~ 249 (381)
.+...+....... ...|||+ .|++ +++..++.+ ++....+++++. ..++ ++ ++ ++++.++++++
T Consensus 172 ~~~~~~~~~~~~~~~~~~gWR~--~f~i-~~~~~l~~~---~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (490)
T PRK10642 172 GVVVLISTIVGEANFLDWGWRI--PFFI-ALPLGIIGL---YLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIA 245 (490)
T ss_pred HHHHHHHHhcCHHHhcCccHHH--HHHH-HHHHHHHHH---HHHHcCCCChhHHHHHHhhhhhccccccccccCCHHHHH
Confidence 7765554322210 0128999 4444 332222222 111122221111 0000 00 00 11122344444
Q ss_pred ccCcchhh-HHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHH
Q psy8365 250 HFPVSFWM-VVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLM 328 (381)
Q Consensus 250 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~ 328 (381)
+.+++.+. .....++....++....|.|.|+++.+|++..+.+.......++..++.++.|+++||+|||+.+......
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~ 325 (490)
T PRK10642 246 TKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVA 325 (490)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 31222222 22333445566777888999999888899988877777777888899999999999999999876554433
Q ss_pred HHHHHHHHHh--hccc--hhHHHHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 329 VSIVCHFMVG--HTMI--DPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 329 ~~~~~~~~~~--~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
..+.+...+. .... ......++.+++.+...+....+..|.+|++.|+++.|
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g 381 (490)
T PRK10642 326 LFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALA 381 (490)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHH
Confidence 3322222211 1111 12233344555555555566778889999999998765
No 20
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=7.6e-33 Score=248.98 Aligned_cols=326 Identities=12% Similarity=0.023 Sum_probs=241.6
Q ss_pred HHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhh
Q psy8365 41 LLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALG 120 (381)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~ 120 (381)
...+...+......+..|.+.++++.++.+.|++.+.+.++..+++++.|+++|| +|||+++..+.++..++..+....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 6 AAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADR-YDRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHh-hchhHHHHHHHHHHHHHHHHHHHH
Confidence 3455556666677778888999999999999999999999999999999999999 999999999988887777665552
Q ss_pred hcc--chhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccch
Q psy8365 121 AYV--DSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQ 198 (381)
Q Consensus 121 ~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr 198 (381)
... .+++.+++.|+++|++.+...+...+++.|++|+++|++++++.+....+|.+++|.+++.+.+.. |||
T Consensus 85 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------g~~ 158 (365)
T TIGR00900 85 ALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL------GIK 158 (365)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh------hHH
Confidence 111 189999999999999999999999999999999999999999999999999999999999988766 699
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhccc---CcccccccccccccCcchhhHHHHHHHhhhhhhcch-h
Q psy8365 199 TLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNA---GETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFV-S 274 (381)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 274 (381)
+ .++..++ ..++..+....+ ..+++++..+++.+ .++....+++.++ +|.++...+..+.......... .
T Consensus 159 ~--~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 232 (365)
T TIGR00900 159 W--AIWVDAV-GFAISALLIVSV--RIPELAASEIQALSNAVLRDTREGIKFVLK-NPLLRTLLLLALLFNLVFAPAIVA 232 (365)
T ss_pred H--HHHHHHH-HHHHHHHHHHhc--ccccCCCccccccchhHHHHHHhHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHH
Confidence 8 4444333 222222222221 11111110000000 0111223445556 6888877777776666666555 7
Q ss_pred hHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhcc---chhHHHHHHH
Q psy8365 275 LAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTM---IDPHITMVMM 351 (381)
Q Consensus 275 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 351 (381)
+.|.|.++.+|.++.+.+.......++..++.++.+++.||.+||+..... ......+........ +...+..++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (365)
T TIGR00900 233 LFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGA-IFVIGLAILVVGLTPPNFPLFLVLWFAI 311 (365)
T ss_pred HhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHH-HHHHHHHHHHHHhhchhHHHHHHHHHHH
Confidence 788888877899999999999999999999999999999999988775443 333333333333322 2234455667
Q ss_pred HHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 352 GIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 352 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
+++.+...+...++..|.+|+++|+++.|
T Consensus 312 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 340 (365)
T TIGR00900 312 GVGYGPINVPQGTLLQRRVPAELLGRVFG 340 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 77777788888999999999999998876
No 21
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=8.5e-32 Score=244.22 Aligned_cols=320 Identities=12% Similarity=0.088 Sum_probs=235.5
Q ss_pred HHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHH
Q psy8365 32 RVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVV 111 (381)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~ 111 (381)
|++.....++..+....+....++..|.+.+++|+|+++.+++.+.+.+++.+++++.|++.|| +|||+.+..+.++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 5 RIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEI-IPLKRQLIFGFALMI 83 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHH
Confidence 3445555566677777778888999999999999999999999999999999999999999999 999999999998888
Q ss_pred HHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhc
Q psy8365 112 IGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEK 191 (381)
Q Consensus 112 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 191 (381)
++.+++.. +++++.+++.|+++|++.+...+...+++.|++|+++|+++++..+....+|..++|.+.+.+....
T Consensus 84 i~~~l~~~---~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-- 158 (394)
T PRK03699 84 LAVAGLMF---SHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARS-- 158 (394)
T ss_pred HHHHHHHH---cchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence 88876665 7899999999999999999888889999999999999999999999999999999998887775432
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhc
Q psy8365 192 FGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFP 271 (381)
Q Consensus 192 ~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (381)
.|||+ .+...+++..+..++ .+ +.+.+++++ ++ ++ +++...++.+ +++++...+..++.....+.
T Consensus 159 ---~gw~~--~f~~~~~~~~~~~~~---~~-~~~~p~~~~-~~-~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 223 (394)
T PRK03699 159 ---IEWYW--VYACIGLVYVAIFIL---TL-FSEFPALGK-HA-PK--ADKPVAKEKW--GIGVLFLAIAALLYILAQLT 223 (394)
T ss_pred ---ccHHH--HHHHHHHHHHHHHHH---HH-hcCCccccc-cC-cc--ccCccccccC--ChHHHHHHHHHHHHHHHHHH
Confidence 17998 555444433222211 11 112111111 00 10 1111111111 46677777777777777778
Q ss_pred chhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhcc--chhHHHHH
Q psy8365 272 FVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTM--IDPHITMV 349 (381)
Q Consensus 272 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 349 (381)
+..|.|.|+++.+|+++.+++.+.+...++..+++++.|++.||+++|+.+........ ....++.... ........
T Consensus 224 ~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 302 (394)
T PRK03699 224 FISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLAL-VLMYLFVNTDDPSHLLYAIL 302 (394)
T ss_pred HHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHH-HHHHHHHHcCCchHHHHHHH
Confidence 88999999998899999999999999999999999999999999999887554443333 3333332222 22233344
Q ss_pred HHHHHHHhhhcchhhhhhhcccCC
Q psy8365 350 MMGIAYSMVASGLWPLIALVIPEY 373 (381)
Q Consensus 350 ~~g~~~~~~~~~~~~~~~~~~p~~ 373 (381)
..|++.+...+...+...|..|++
T Consensus 303 ~~G~~~~~~~~~~~~~~~~~~~~~ 326 (394)
T PRK03699 303 GLGFFSSAIYTTIITLGSQQTKVA 326 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCC
Confidence 556655656666667777766644
No 22
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=6.1e-32 Score=248.18 Aligned_cols=333 Identities=14% Similarity=0.135 Sum_probs=236.1
Q ss_pred hhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHH
Q psy8365 30 IQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVL 109 (381)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~ 109 (381)
+.++..+....+.++.+.++.....+..|.+++++|+|+.+.+++.+.+.+++.+++++.|+++|| +|||+++..+.+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr-~g~r~~l~~~~~~ 92 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADK-FGRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHH
Confidence 345555667777888888999888999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 110 VVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
.+++.+++.. +++++.+++.|+++|++.+...+....++.|++|+|+|++++++...+..+|.++++.+.+.+.+..
T Consensus 93 ~~~~~~~~~~---~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~ 169 (426)
T PRK12307 93 YSVGTGLSGL---ASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY 169 (426)
T ss_pred HHHHHHHHHH---HhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC
Confidence 9998876665 7899999999999999999999999999999999999999999999999999999988887776544
Q ss_pred hccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHh-hh-cccCccc-------ccccccccccCcchhhHHH
Q psy8365 190 EKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERIL-NR-RNAGETE-------VARLSDVKHFPVSFWMVVV 260 (381)
Q Consensus 190 ~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 260 (381)
+||+ .+++ +.+..++ .+......+++++.. ++ +++++++ ..+++++++ ++.++....
T Consensus 170 ------~w~~--~f~i-~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 235 (426)
T PRK12307 170 ------GWRA--AFFV-GLLPVLL----VIYIRARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFN-RAQFPLTLC 235 (426)
T ss_pred ------CHHH--HHHH-HHHHHHH----HHHHHHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHh-hchHHHHHH
Confidence 7998 4433 2222111 111111111111110 10 0110000 013345555 555554333
Q ss_pred HH---HHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHH
Q psy8365 261 II---VSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMV 337 (381)
Q Consensus 261 ~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 337 (381)
.. +......+....+.|.|+++ .|.++.+.+...+...++.++++++.|++.||++||+..........+....+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 314 (426)
T PRK12307 236 VFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLF 314 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 22 22223333456788988876 689998999888888999999999999999999998875544333322222222
Q ss_pred hhccc-hhHHHHHHHHHHHHh--hhcchhhhhhhcccCCcccccccC
Q psy8365 338 GHTMI-DPHITMVMMGIAYSM--VASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 338 ~~~~~-~~~~~~~~~g~~~~~--~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
..... .......+++++... ..+....++.|.+|++.||++.|+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 361 (426)
T PRK12307 315 RIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGL 361 (426)
T ss_pred HHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhH
Confidence 22211 222233344443322 234556778999999999998874
No 23
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=9.9e-33 Score=257.72 Aligned_cols=330 Identities=14% Similarity=0.096 Sum_probs=249.7
Q ss_pred HHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHH
Q psy8365 36 LLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQL 115 (381)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~ 115 (381)
+..+++..+...++....++..|.+.+++|.++++.+++.+.+.++..++.++.|+++|| +|||+.+..+.++..++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKR-FGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHH-hCcHHHHHHHHHHHHHHHH
Confidence 445566777788888889999999999999999999999999999999999999999999 9999999999999999888
Q ss_pred HHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccc
Q psy8365 116 VFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLI 195 (381)
Q Consensus 116 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 195 (381)
++.. ++|++.+++.|+++|++.+...+...+++.|++|+++|+++++++.....+|..++|.+++.+.++.
T Consensus 83 ~~~~---~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------ 153 (485)
T TIGR00711 83 LCGV---APNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY------ 153 (485)
T ss_pred HHhC---cCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc------
Confidence 7765 7899999999999999999999999999999999999999999999999999999999999887755
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHH-Hhh-------------------hcccC-----------------
Q psy8365 196 GYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAER-ILN-------------------RRNAG----------------- 238 (381)
Q Consensus 196 gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------------------~~~~~----------------- 238 (381)
+||+ .++..+.+..+ ..+........++++++ +.+ +.+++
T Consensus 154 ~w~~--~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (485)
T TIGR00711 154 HWRW--IFLINVPIGII-VVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLV 230 (485)
T ss_pred Ccee--hhhhhhHHHHH-HHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHH
Confidence 7998 55444433322 22222222111111100 000 00000
Q ss_pred -----------cccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhh
Q psy8365 239 -----------ETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSP 307 (381)
Q Consensus 239 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~ 307 (381)
++++....+.++ +|+++...+..++.....+....+.|.|+++.+|.++.+++.......++..++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~ 309 (485)
T TIGR00711 231 AIIAFVVWELTDDNPLVDLRLFK-YRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSP 309 (485)
T ss_pred HHHHHHHHHHcCCCCccCHHHHc-CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 000000112334 57777777777777777788888899999999999999999999999999999999
Q ss_pred hHHHHHHhhcchHHHHHHHHHHHHHHHHHHh--hcc----chhHHHHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 308 LMGLVVDKTGRNLFWVFISLMVSIVCHFMVG--HTM----IDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 308 ~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
+.|++.||++||+...... .....+..+.. ... +.......+.|++.+...+.......+..|++++|++.|
T Consensus 310 ~~g~l~~r~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~ 387 (485)
T TIGR00711 310 IAGRMGDKIDPRKLVTIGL-ILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSS 387 (485)
T ss_pred HHHHHHhhcCcHHHHHHHH-HHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHH
Confidence 9999999999988754443 33333343333 211 123344566788887776666777788899999998876
No 24
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=1.4e-31 Score=242.27 Aligned_cols=318 Identities=10% Similarity=0.110 Sum_probs=230.7
Q ss_pred HHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHH
Q psy8365 32 RVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVV 111 (381)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~ 111 (381)
.|..+..+.+..+..........+..|.+.+++|.++++.|+..+.+.++..+++++.|++.|| +|||+.+..+.++.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~grr~~~~~~~~~~~ 96 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQA-TDRRYVVILFAVLLT 96 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCcHHHHHHHHHHHH
Confidence 4554444444444444444455567889999999999999999999999999999999999999 999999999999999
Q ss_pred HHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhc
Q psy8365 112 IGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEK 191 (381)
Q Consensus 112 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 191 (381)
++.+++.. +++++.+++.|+++|++.+...+...+++.|++|+|+|++++++.....++|..++|.+++.+.++.
T Consensus 97 ~~~~~~~~---~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~-- 171 (394)
T PRK10213 97 LSCLLVSF---ANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI-- 171 (394)
T ss_pred HHHHHHHH---HChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--
Confidence 88876655 7999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhc
Q psy8365 192 FGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFP 271 (381)
Q Consensus 192 ~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (381)
|||+ .++..+++.. +. .+......|++++ ++ ++...+.++.++ +|++|...+..++.....+.
T Consensus 172 ----gw~~--~f~~~~~l~~-~~---~l~~~~~~p~~~~----~~--~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~ 234 (394)
T PRK10213 172 ----GWRN--VFNAAAVMGV-LC---IFWIIKSLPSLPG----EP--SHQKQNTFRLLQ-RPGVMAGMIAIFMSFAGQFA 234 (394)
T ss_pred ----CHHH--HHHHHHHHHH-HH---HHHHHHHCCCCCc----cc--ccchhHHHHHhc-CHHHHHHHHHHHHHHHHHHH
Confidence 7998 5554443222 21 1111111111110 01 111112344555 68888776666666666666
Q ss_pred chhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh--ccchhHHHHH
Q psy8365 272 FVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH--TMIDPHITMV 349 (381)
Q Consensus 272 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 349 (381)
..++.++++.+++|+++.+.+.......+++.++..+.+++.||.+ |+.+...........+.+... ..+.......
T Consensus 235 ~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 313 (394)
T PRK10213 235 FFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSDKIVATGVAI 313 (394)
T ss_pred HHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 6677655555678999999999999999999999999999999954 443333333333333333222 2233344566
Q ss_pred HHHHHHHhhhcchhhhhhhcccCC
Q psy8365 350 MMGIAYSMVASGLWPLIALVIPEY 373 (381)
Q Consensus 350 ~~g~~~~~~~~~~~~~~~~~~p~~ 373 (381)
+.|++++...+...+.+.+..|++
T Consensus 314 l~G~~~~~~~~~~~~~~~~~~~~~ 337 (394)
T PRK10213 314 IWGLTFALVPVGWSTWITRSLADQ 337 (394)
T ss_pred HHHHHHHhhhHHHHHHHHHHCccc
Confidence 677777777777777888888754
No 25
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=5.1e-33 Score=252.81 Aligned_cols=325 Identities=17% Similarity=0.174 Sum_probs=238.7
Q ss_pred HHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhc
Q psy8365 43 GFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAY 122 (381)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~ 122 (381)
+..+++++...+...|.+.+++|.|+.+.+++.+++.++..+++++.|+++|| +|||+.+..+.++.+++..++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~~~~~~--- 78 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDR-FGARKTLAVFIVIWGVFTGLQAF--- 78 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHh-cCcceeeHHHHHHHHHHHHHHHH---
Confidence 45667788888889999999999999999999999999999999999999999 99999999999988888877665
Q ss_pred cchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHH
Q psy8365 123 VDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGI 202 (381)
Q Consensus 123 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~ 202 (381)
+++++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+...++|.++++.+++.+.+.. +||+ .
T Consensus 79 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------~~~~--~ 150 (399)
T TIGR00893 79 AGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF------SWQW--A 150 (399)
T ss_pred HcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC------CchH--H
Confidence 6899999999999999999999999999999999999999999999999999999999999887765 6998 5
Q ss_pred HHHHHHHHHHHHHHHHHhhcccchhh----HHHhhh--cc---------cCcccccccccccccCcchhhHHHHHHHhhh
Q psy8365 203 VLLLAGMTCVLSLLCSLLLGCMDKRA----ERILNR--RN---------AGETEVARLSDVKHFPVSFWMVVVIIVSYYT 267 (381)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (381)
+...++...+..++........++++ ++..+. ++ +++++..+.++.++ +|+++...+..++...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 229 (399)
T TIGR00893 151 FIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLK-DRRVWGLALGQFLVNI 229 (399)
T ss_pred HHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhc-CHHHHHHHHHHHHHHh
Confidence 55544433333322222111111100 000000 00 00011122344555 6888888888888888
Q ss_pred hhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHH---HHHH--HHHHHHHhhc-c
Q psy8365 268 SIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFIS---LMVS--IVCHFMVGHT-M 341 (381)
Q Consensus 268 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~---~~~~--~~~~~~~~~~-~ 341 (381)
.......+.|.|+++.+|.++.+.+...+...+++.++.++.|++.||++||+...... .... ..+....... .
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (399)
T TIGR00893 230 GLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYV 309 (399)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccc
Confidence 88888899999999989999999999999999999999999999999999886211111 1111 1111111111 1
Q ss_pred chhHHHH--HHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 342 IDPHITM--VMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 342 ~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
....... ...+.......+..+++..|..|+++|+++.|
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 350 (399)
T TIGR00893 310 NIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGG 350 (399)
T ss_pred hhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHH
Confidence 1222222 22222222256788999999999999998876
No 26
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=100.00 E-value=7.6e-32 Score=242.64 Aligned_cols=334 Identities=19% Similarity=0.227 Sum_probs=236.0
Q ss_pred HHHHHHHhhhhhhcCchhhHHH-HHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHH
Q psy8365 38 LMCLLGFGSYFCYDNPSSLEEH-FTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLV 116 (381)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~ 116 (381)
..++..+..+..+...++..|. +++++|+|+.+.+++.+.+.+++.+++++.|+++|| +|||+.+.++.++..++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~i~~~~ 83 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDK-FGPRYTTTLSLLLLAIPCLW 83 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHH
Confidence 4555566677777888899995 999999999999999999999999999999999999 99999999999999998887
Q ss_pred HHhhhccc-hhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcc---
Q psy8365 117 FALGAYVD-SLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKF--- 192 (381)
Q Consensus 117 ~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~--- 192 (381)
+.. ++ +++.+++.|+++|++.+ ..+...+++.|++|+++|++++++.....++|..+++.+++.+.......
T Consensus 84 ~~~---~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~ 159 (366)
T TIGR00886 84 AGL---AVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGL 159 (366)
T ss_pred HHH---HhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccc
Confidence 665 67 99999999999999854 45667889999999999999999999888899988888887776643111
Q ss_pred -ccccchhhHHHHH-HHHHHHHHHHHHHHhhcccchhhHHHhhhcccCc----ccc---cccccccccCcchhhHHHHHH
Q psy8365 193 -GLIGYQTLGIVLL-LAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGE----TEV---ARLSDVKHFPVSFWMVVVIIV 263 (381)
Q Consensus 193 -~~~gWr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~ 263 (381)
...+||+ .++. .+++..+..++..... ..+++++++.++.+.++ .++ .+.++.++ +|++|...+..+
T Consensus 160 ~~~~~w~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 235 (366)
T TIGR00886 160 PAHLAWGW--AFVIVPAGILLLPALLIFFVG-ADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFR-DRHTWILALLYS 235 (366)
T ss_pred cccccccc--hhHHHHHHHHHHHHHHHHHhc-ccCCcccccchhcccccccccccchhHHHHHHHHh-ccchhhHHHHHH
Confidence 1127998 4523 2333333332222211 11111111000000000 000 02334455 677888877777
Q ss_pred HhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHH-hhccc
Q psy8365 264 SYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMV-GHTMI 342 (381)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~-~~~~~ 342 (381)
+..........+.|.|+++.+|.++.+++.+.....+.+++++++.|++.||+++|+...............+. .....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (366)
T TIGR00886 236 VTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSP 315 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCc
Confidence 77777778888999999998999999999988889999999999999999999988765444333322222222 12211
Q ss_pred -hh---HHHHHHHHHHHHhhhcchhhhhhhcccCCcccccccC
Q psy8365 343 -DP---HITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 343 -~~---~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
.. .....+..+..+...+..++...|..| +++|+++|+
T Consensus 316 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~ 357 (366)
T TIGR00886 316 LSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGL 357 (366)
T ss_pred chHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHH
Confidence 22 223334455555566677888888887 568888763
No 27
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=9e-32 Score=243.85 Aligned_cols=320 Identities=16% Similarity=0.159 Sum_probs=237.0
Q ss_pred HHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhh
Q psy8365 42 LGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGA 121 (381)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~ 121 (381)
..+..........+..|.+.+++|.|+++.+++.+.+.++..+++++.|++.|| +|||+.+..+.++.+++.+.+..
T Consensus 13 ~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~~~~~~-- 89 (385)
T TIGR00710 13 LSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDR-YGRRPVLLLGLFIFALSSLGLAL-- 89 (385)
T ss_pred HHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHHHHHHHHHHHHH--
Confidence 344555666777788899999999999999999999999999999999999999 99999999999888888876665
Q ss_pred ccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhH
Q psy8365 122 YVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLG 201 (381)
Q Consensus 122 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~ 201 (381)
+++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+.. +||+
T Consensus 90 -~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------~~~~-- 160 (385)
T TIGR00710 90 -SNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL------SWHA-- 160 (385)
T ss_pred -HccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CHHH--
Confidence 7899999999999999999999999999999999999999999999999999999999999887765 6998
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHH
Q psy8365 202 IVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFV 281 (381)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (381)
.++..++...+..+... . ..++++++ ++++++++...++++.++ +|+++...+.........+....+.|.+++
T Consensus 161 ~~~~~~~~~~~~~~~~~-~--~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (385)
T TIGR00710 161 IFAFLSLAGILLSALIF-F--ILPETLPY--EARIQISTYFETFLLLLK-SKMFWGYALIYGASFGGFFAFFSGAPFVYI 234 (385)
T ss_pred HHHHHHHHHHHHHHHHH-H--hCCCCCCC--cccCCHHHHHHHHHHHHc-CchhHHHHHHHHHHHHHHHHHHHcChHHHH
Confidence 55544443332222211 1 11111111 111111111223445556 688887777666666666777778888888
Q ss_pred HhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh--cc--c--hhHHHHHHHHHHH
Q psy8365 282 KRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH--TM--I--DPHITMVMMGIAY 355 (381)
Q Consensus 282 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~--~--~~~~~~~~~g~~~ 355 (381)
+.+|.++.+.+.......++.+++.++.|++.||+++|+..........+....+... .. . .......+.+++.
T Consensus 235 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 314 (385)
T TIGR00710 235 DIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGN 314 (385)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999998887554433333222222111 11 1 1122344556667
Q ss_pred HhhhcchhhhhhhcccCCccccccc
Q psy8365 356 SMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 356 ~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
+...+.......|..| ++++++.+
T Consensus 315 ~~~~~~~~~~~~~~~~-~~~g~~~~ 338 (385)
T TIGR00710 315 SMISSIAMAYALEDFP-HVAGTASA 338 (385)
T ss_pred HHHHHHHHHHHhccCc-ccchHHHH
Confidence 7777777788888877 45777654
No 28
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=8.6e-32 Score=248.27 Aligned_cols=341 Identities=13% Similarity=0.049 Sum_probs=232.2
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHH
Q psy8365 28 HNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYS 107 (381)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~ 107 (381)
.++++|..+...++.....+.++...+...|.+.++ |+|+.+.|++.+.+.+++.+++++.|+++|| +|||++++.+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr-~g~k~~l~~~~ 100 (452)
T PRK11273 23 YRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDR-SNPRVFLPAGL 100 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCCchhHHHHH
Confidence 344556666666666677777777778888999988 9999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHhhh-ccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHh-hhhhhHHH
Q psy8365 108 VLVVIGQLVFALGA-YVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTV-NMFVAEPL 185 (381)
Q Consensus 108 ~~~~~~~~~~~~~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~l 185 (381)
++.+++.+.+.+.. .+.+++.+++.|++.|++.+...+.....+.|++|+++|++++++.+.+.++|..+ +++++..+
T Consensus 101 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~ 180 (452)
T PRK11273 101 ILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGM 180 (452)
T ss_pred HHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 98888877665521 12478889999999999988888888888999999999999999999999988744 45433333
Q ss_pred HhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhH------HHhhhcc-----cCccccccccc-----cc
Q psy8365 186 YKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAE------RILNRRN-----AGETEVARLSD-----VK 249 (381)
Q Consensus 186 ~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-----~~~~~~~~~~~-----~~ 249 (381)
... .+||+ .+++.+.+..+..++..... ++++++ ++.+++. ++++++.+.++ ++
T Consensus 181 ~~~------~gw~~--~f~i~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (452)
T PRK11273 181 AWF------NDWHA--ALYMPAFAAILVALFAFAMM--RDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVL 250 (452)
T ss_pred HHh------ccHHH--HHHHHHHHHHHHHHHHHHHc--cCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHH
Confidence 221 17998 56655554444333332222 222111 0000000 00011111122 34
Q ss_pred ccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhh--cchHHHHHHHH
Q psy8365 250 HFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKT--GRNLFWVFISL 327 (381)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~--g~r~~~~~~~~ 327 (381)
+ ++.+|...+..++.+...+....|.|.|+++..|++..+++.......++.+++.++.|+++||+ +||........
T Consensus 251 ~-~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~ 329 (452)
T PRK11273 251 P-NKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFM 329 (452)
T ss_pred c-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHH
Confidence 4 68888888888888877788889999999998899999999888888899999999999999999 44443222222
Q ss_pred HHHHHHHHHHhh--ccchhHHHHHHHHHHHHhhh--cchhhhhhhcccCCcccccccC
Q psy8365 328 MVSIVCHFMVGH--TMIDPHITMVMMGIAYSMVA--SGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 328 ~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
.+..++...+.. ..........++.++..... .....+..|.+|++.||++.|+
T Consensus 330 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 387 (452)
T PRK11273 330 TLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGF 387 (452)
T ss_pred HHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHH
Confidence 222222222211 11111222223333333222 2234567799999999998763
No 29
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=1.9e-31 Score=239.49 Aligned_cols=326 Identities=13% Similarity=0.149 Sum_probs=228.6
Q ss_pred chhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHh-hhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHH
Q psy8365 29 NIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTT-DMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYS 107 (381)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~ 107 (381)
++..++.+.+..+.....+..+..++++.+.+.+ ++|+|++|.+++.+++.+++.++.++.|++.|| +|.|+++.++.
T Consensus 29 ~~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr-~G~R~v~~~~~ 107 (462)
T PRK15034 29 KHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPI-FGGRRWTVFST 107 (462)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHH
Confidence 3344567777788888889999999999999876 899999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHhh--hccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHH
Q psy8365 108 VLVVIGQLVFALG--AYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPL 185 (381)
Q Consensus 108 ~~~~~~~~~~~~~--~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 185 (381)
++.++..+...+. ...++++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....++|..+++++...+
T Consensus 108 ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~ 186 (462)
T PRK15034 108 AILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLV 186 (462)
T ss_pred HHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 9988887766541 1127999999999999998 888999999999999999999999999877778887777666554
Q ss_pred H-----hhhhccc-------cccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCc
Q psy8365 186 Y-----KYVEKFG-------LIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPV 253 (381)
Q Consensus 186 ~-----~~~~~~~-------~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (381)
. +..+... ..+||. ..++...+..+..++.. + ..+++++ ++.+..+.++.+| +|
T Consensus 187 i~~~l~~~~G~~~~~~~~g~~~~~~~--~~~~~~~~~iv~~i~~~-~--~~~~~~~--------~~~~~~~~~~vlk-~~ 252 (462)
T PRK15034 187 IFVPVFAFLGVNGVPQADGSVMSLAN--AAWIWVPLLAIATIAAW-S--GMNDIAS--------SRASIADQLPVLQ-RL 252 (462)
T ss_pred HHHHHHHHhccccccccccchHHHHH--HHHHHHHHHHHHHHHHH-H--hCCCccc--------cccCHHHHHHHhC-CC
Confidence 3 2222110 124777 33333332222222221 1 2222111 1111223445667 79
Q ss_pred chhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHH
Q psy8365 254 SFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVC 333 (381)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 333 (381)
+.|.+.+.+++.+..+.++..++|.|+++.+ +.........+..+...+.++++|+++||+|+|+.+......+.+..
T Consensus 253 ~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~ 330 (462)
T PRK15034 253 HLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFS 330 (462)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHH
Confidence 9999999999999999999989999988755 33333333444567788899999999999999988666555444443
Q ss_pred HHHHhh-cc---chhH---HHHHHHHHHHHhhhcchhhhhhhcccC
Q psy8365 334 HFMVGH-TM---IDPH---ITMVMMGIAYSMVASGLWPLIALVIPE 372 (381)
Q Consensus 334 ~~~~~~-~~---~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~p~ 372 (381)
...... +. .... ..++...++.+.-+...+-++.+.+|+
T Consensus 331 ~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~ 376 (462)
T PRK15034 331 ALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQ 376 (462)
T ss_pred HHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhh
Confidence 332222 11 1111 112222234444445556677777764
No 30
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-32 Score=231.69 Aligned_cols=334 Identities=16% Similarity=0.179 Sum_probs=252.7
Q ss_pred hhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHH
Q psy8365 30 IQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVL 109 (381)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~ 109 (381)
+.+.+.+.+........+..+..++++.+.+.+|+|+|+.|.+++.++..+...+..++.|.+.|| +|.|++..++.++
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~dr-fGgR~~~~~s~~l 88 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDR-FGGRKWTILSMLL 88 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcc-cCchHHHHHHHHH
Confidence 344556667777777888889999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 110 VVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
..+-.+...+...-++++++++.+.+.|++ |..+......+++|+|||++|.++|+.. ..|+|..+...++..+....
T Consensus 89 ~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~ 166 (417)
T COG2223 89 LLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF 166 (417)
T ss_pred HHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH
Confidence 988888777754456677999999999999 8888999999999999999999999999 88899999999999888877
Q ss_pred hccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhh
Q psy8365 190 EKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSI 269 (381)
Q Consensus 190 ~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (381)
+.. .||.....+ .....+..+. . +...++.++.+.+ .++....+.+.+++ +|+.|.+.+.++..+.++
T Consensus 167 g~~---~w~~~~~i~--~~~l~v~~v~-~--~~~~~d~p~~r~~---~~~~~~~~~~~v~~-~~~~W~lsllY~~tFG~F 234 (417)
T COG2223 167 GFL---AWRNVAGIY--VVALAIAAVL-A--WLGMNDVPEHRAS---VKPQLPAQLKAVFS-NKDTWLLSLLYFATFGGF 234 (417)
T ss_pred hhH---HHHHHHHHH--HHHHHHHHHH-H--HHHhCCChhhhcc---ccccchhHHHHHhc-CcchHHHHHHHHHHHHHH
Confidence 321 188733322 2222222222 2 1122222221111 11111145667777 899999999999999999
Q ss_pred hcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhc-----cchh
Q psy8365 270 FPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHT-----MIDP 344 (381)
Q Consensus 270 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-----~~~~ 344 (381)
.++..++|.|+++++|.++.+++.......+.+.+.++.+|+++||+|.++.+......+.+....+.... ....
T Consensus 235 vgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~ 314 (417)
T COG2223 235 VGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSF 314 (417)
T ss_pred HHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcch
Confidence 99999999999999999999999999999999999999999999999988886666555554444443331 0112
Q ss_pred ---HHHHHHHHHHHHhhhcchhhhhhhcccCCcccccc
Q psy8365 345 ---HITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAY 379 (381)
Q Consensus 345 ---~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~ 379 (381)
........+..+.-....+.++..++|++ .|.+.
T Consensus 315 ~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-~G~v~ 351 (417)
T COG2223 315 VVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-TGAVT 351 (417)
T ss_pred HHHHHHHHHHHHHhccCcchheeechHHHHhh-hhHHH
Confidence 22233344444555556677777777654 44443
No 31
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=7.2e-31 Score=240.90 Aligned_cols=338 Identities=11% Similarity=0.042 Sum_probs=226.2
Q ss_pred hhHHHHHHHHHHHHHhhhhhhcCchhhHHH-HHhhh--cCChHHHHHHH-----HHhhhhhhHHhhhhhhhhhhhcCchh
Q psy8365 30 IQRVLALLLMCLLGFGSYFCYDNPSSLEEH-FTTDM--HLTNAQYMNLY-----SWYSWPNVICCFIGGFLIDRVFGIRM 101 (381)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~s~~~~g~~~-----s~~~~~~~~~~~~~g~l~dr~~G~r~ 101 (381)
.+++..+...++..+.+++|...++...|. +.+++ +.++. .+++. ++..++..+++++.|+++|| +|||+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr-~Grr~ 95 (438)
T PRK09952 18 SRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDR-LGRKR 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHh-hccHH
Confidence 344556667777888899999988887764 55555 66666 45543 34556778999999999999 99999
Q ss_pred hhHHHHHHHHHHHHHHHhhhccchhH--------HHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhH
Q psy8365 102 GSTIYSVLVVIGQLVFALGAYVDSLF--------ITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRV 173 (381)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 173 (381)
++..+.++++++.+++++ ++++. .+++.|+++|++.|..++....++.|++|+|+|++..+..+.+..+
T Consensus 96 ~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~ 172 (438)
T PRK09952 96 MLMLTVWMMGIATALIGL---LPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGV 172 (438)
T ss_pred HHHHHHHHHHHHHHHHhc---CCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHH
Confidence 999999999999887766 78876 5889999999999999999999999999999999999999999999
Q ss_pred hhHhhhhhhHHHHhhhhcc--ccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHH-hhh-cccCcccccc-cccc
Q psy8365 174 GSTVNMFVAEPLYKYVEKF--GLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERI-LNR-RNAGETEVAR-LSDV 248 (381)
Q Consensus 174 g~~~g~~~~~~l~~~~~~~--~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~-~~~~ 248 (381)
|.+++..+...+....+.. ...|||+ .|++.++ ..++ .. .+....++.++. .++ ++++++++.+ .+.+
T Consensus 173 G~~l~~~~~~~l~~~~~~~~~~~~gWr~--~f~~~~~-~~l~---~~-~l~~~~~es~~~~~~~~~~~~~~~~~~~~~~l 245 (438)
T PRK09952 173 GLLLSTGLVSLISMMTTDEQFLSWGWRI--PFLFSIV-LVLI---AL-WVRNGMEESAEFEQQQHEQAAAKKRIPVIEAL 245 (438)
T ss_pred HHHHHHHHHHHHHHhCCHHHhhccChHH--HHHHHHH-HHHH---HH-HHHHhCCCChhHHHHHhhcccccccCCHHHHH
Confidence 9999887776665433210 0128998 4443332 2221 11 121111121111 111 1111111112 2234
Q ss_pred cccCcchhhHHH-HHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHH
Q psy8365 249 KHFPVSFWMVVV-IIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISL 327 (381)
Q Consensus 249 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~ 327 (381)
++ +|+.|...+ ..++.....+....|.|.|+++.+|.+............+...++.++.|+++||++||+.......
T Consensus 246 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~ 324 (438)
T PRK09952 246 LR-HPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGAL 324 (438)
T ss_pred HH-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 44 455555443 4455556667778899999988889888765555556667778888999999999999987554433
Q ss_pred HHHHHHHHHHh-h-ccchh---HHHHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 328 MVSIVCHFMVG-H-TMIDP---HITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 328 ~~~~~~~~~~~-~-~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
...+....... . ..... .....+.+++.+...+..+++..|.+|++.|+++.|
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g 382 (438)
T PRK09952 325 IGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAG 382 (438)
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHh
Confidence 32222211111 1 11111 122333455666666777899999999999987765
No 32
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=1e-31 Score=249.07 Aligned_cols=281 Identities=14% Similarity=0.157 Sum_probs=223.3
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHh----------------------hhcCChHHHHHHHHHhhhhhhHH
Q psy8365 28 HNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTT----------------------DMHLTNAQYMNLYSWYSWPNVIC 85 (381)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~s~~~~g~~~s~~~~~~~~~ 85 (381)
..+.||.+..++++....++.++...+...+.+.+ |++++..+.|++.+.+.+++.++
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 45667888888888888999999888888777766 78999999999999999999999
Q ss_pred hhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHH
Q psy8365 86 CFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFG 165 (381)
Q Consensus 86 ~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 165 (381)
+++.|+++|| +|||+.+..+.++.+++.+++... ...+++.+++.|+++|++.+...+....++.||+|+++|+++++
T Consensus 93 ~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~-~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 170 (465)
T TIGR00894 93 QIPVGYLAGK-YVFKWSIGIGMFLSSVISIVIPWA-AGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLG 170 (465)
T ss_pred HcchHHHHHH-hCcchhhHHHHHHHHHHHHHHHHH-HHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHH
Confidence 9999999999 999999999998888887765432 23568889999999999999999999999999999999999999
Q ss_pred HHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHh---h-----hc-c
Q psy8365 166 FQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERIL---N-----RR-N 236 (381)
Q Consensus 166 ~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~-~ 236 (381)
+...+..+|..+++++++.+.+... |||+ .+++.++...+..++.... ...+|++++.. + +. +
T Consensus 171 ~~~~~~~~g~~i~~~l~~~l~~~~~-----gw~~--~f~i~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~i~~~~~ 242 (465)
T TIGR00894 171 MSTSGFQLGTFIFLPISGWLCESWG-----GWPM--IFYVFGIVGCAWSLLWFVF-PADDPSIHPCISKFEKKYINSSLQ 242 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccC-----CCCe--ehhhhhHHHHHHHHHHHHH-hcCCcccCCCCCHHHHHHHHhhcc
Confidence 9999999999999999998876521 6998 5655555433333222221 11111111000 0 00 0
Q ss_pred c---CcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHH
Q psy8365 237 A---GETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVV 313 (381)
Q Consensus 237 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~ 313 (381)
+ +++++.+++++++ ++.+|...+..++.+...+.+.+|+|.|+++.+|.+..+.++..+...++..++.++.|++.
T Consensus 243 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~ 321 (465)
T TIGR00894 243 GQKGSTRQSLPIKAIPK-SLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLA 321 (465)
T ss_pred cccCCCCCCCCHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1111234566666 78899999999999999889999999999999999999999999999999999999999999
Q ss_pred Hhhcch
Q psy8365 314 DKTGRN 319 (381)
Q Consensus 314 dr~g~r 319 (381)
||+++|
T Consensus 322 d~~~~~ 327 (465)
T TIGR00894 322 DFLKSS 327 (465)
T ss_pred HHHHHc
Confidence 998643
No 33
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.5e-31 Score=253.82 Aligned_cols=345 Identities=11% Similarity=0.070 Sum_probs=243.8
Q ss_pred chhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHH
Q psy8365 29 NIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSV 108 (381)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~ 108 (381)
.+++|..+.+++++.+...++....+.++|.+.+++|++..+.+++.+++.++.+++++++|+++|| +|||+.++++.+
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR-~GRR~~lii~li 240 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADK-LGRKQCLLICLS 240 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHH
Confidence 4667777777888888888888889999999999999999999999999999999999999999999 999999999998
Q ss_pred HHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhh
Q psy8365 109 LVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKY 188 (381)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (381)
+.+++.+++.+ +++++.++++|++.|++.+...+...+++.|++|+++|++.+++...+..+|.++++.++..+...
T Consensus 241 l~~i~~ll~af---a~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~ 317 (742)
T TIGR01299 241 VNGFFAFFSSF---VQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPH 317 (742)
T ss_pred HHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88888876665 789999999999999999999999999999999999999999999999999999999988877654
Q ss_pred hhcc-------ccccchhhHHHHHHHHHHHHHHHHHHHhhcccch------hhHH---Hh---hhcc-------------
Q psy8365 189 VEKF-------GLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDK------RAER---IL---NRRN------------- 236 (381)
Q Consensus 189 ~~~~-------~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~---~~~~------------- 236 (381)
.+.. ...+||+ ++.+.++.+++.++....++..++ +.++ .. .+.+
T Consensus 318 ~G~~~~~g~~~~~~gWR~---l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~ 394 (742)
T TIGR01299 318 YGWSFQMGSAYQFHSWRV---FVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSV 394 (742)
T ss_pred ccchhccccccccccHHH---HHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHH
Confidence 4321 1237998 333333344333332222210000 0000 00 0000
Q ss_pred -------cC------ccccc-------------------ccccccc--cCcchhhHHHHHHHhhhhhhcchhhHHHHHHH
Q psy8365 237 -------AG------ETEVA-------------------RLSDVKH--FPVSFWMVVVIIVSYYTSIFPFVSLAQELFVK 282 (381)
Q Consensus 237 -------~~------~~~~~-------------------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (381)
.. +++.. +++++++ .+++.+.+.+..++..+.++++..|+|.++.+
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~ 474 (742)
T TIGR01299 395 NHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKH 474 (742)
T ss_pred HHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00000 1122222 13556777888888899999999999987644
Q ss_pred h----c-----------------CCCh-----------------------------------------------------
Q psy8365 283 R----F-----------------NLDS----------------------------------------------------- 288 (381)
Q Consensus 283 ~----~-----------------g~~~----------------------------------------------------- 288 (381)
. + +++.
T Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 554 (742)
T TIGR01299 475 LQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDT 554 (742)
T ss_pred HHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhh
Confidence 1 0 0000
Q ss_pred ----------------------------------------hhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHH
Q psy8365 289 ----------------------------------------DAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLM 328 (381)
Q Consensus 289 ----------------------------------------~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~ 328 (381)
........+..++.+++.++.|+++||+|||+.++.. .+
T Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~-~~ 633 (742)
T TIGR01299 555 LFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGS-MV 633 (742)
T ss_pred hccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH-HH
Confidence 0012234456688899999999999999999985444 44
Q ss_pred HHHHHHHHHhhcc--chhHHHHHHHHHHHHhhhcchhhhhhhcccCCcccccccC
Q psy8365 329 VSIVCHFMVGHTM--IDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 329 ~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
+..++.+++.+.. ...++..++++++.+...+..+.+++|.+|++.|++++|+
T Consensus 634 lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi 688 (742)
T TIGR01299 634 LSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGF 688 (742)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 4444444333322 2233333455655566677788999999999999998763
No 34
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=9.8e-31 Score=243.14 Aligned_cols=330 Identities=14% Similarity=0.108 Sum_probs=243.8
Q ss_pred HHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHH
Q psy8365 36 LLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQL 115 (381)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~ 115 (381)
+.++++..+...++.....+..|.+.+++|.++.+.+++.+.+.++..++.+++|+++|| +|||++++.+.++.+++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 12 LWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADR-VGVRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHHH
Confidence 344556667777788888888999999999999999999999999999999999999999 9999999999888888877
Q ss_pred HHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccc
Q psy8365 116 VFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLI 195 (381)
Q Consensus 116 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 195 (381)
.+.. +++++.+++.|+++|++.+...+...+++.|++|+++|+++.++.....++|..++|.+++.+.++.
T Consensus 91 ~~~~---~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~------ 161 (471)
T PRK10504 91 FCAL---SGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA------ 161 (471)
T ss_pred HHHH---hCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc------
Confidence 6554 7899999999999999999999999999999999999999999999999999999999999998765
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHh-------------------hh----------------------
Q psy8365 196 GYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERIL-------------------NR---------------------- 234 (381)
Q Consensus 196 gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~---------------------- 234 (381)
|||+ .++...... .+..+.........++++++. ++
T Consensus 162 gw~~--~f~~~~~~~-~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (471)
T PRK10504 162 SWHW--IFLINIPVG-IIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVAL 238 (471)
T ss_pred cHHH--HHHHHHHHH-HHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHH
Confidence 7998 454443322 222222222111111110000 00
Q ss_pred ------cccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhh
Q psy8365 235 ------RNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPL 308 (381)
Q Consensus 235 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 308 (381)
+++.+++..+. ++++ ||+++......++..........+.|.|+++..|.++.+.++......++..++.++
T Consensus 239 ~~~~~~~~~~~~~~~~~-~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 316 (471)
T PRK10504 239 LLYLLHARNNNRALFSL-KLFR-TRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRI 316 (471)
T ss_pred HHHHHHHhcCCCCccCH-HHhc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00000111112 2445 678887777777777776666677888888888999999999988888888888899
Q ss_pred HHHHHHhhcchHHHHHHHHHHHHHHHHHHhhc--cchh--HHHHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 309 MGLVVDKTGRNLFWVFISLMVSIVCHFMVGHT--MIDP--HITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 309 ~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
.+++.||++||+.+........+....+.... .+.. ....++.|++.+...+....+..+.+|++.+|+++|
T Consensus 317 ~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 392 (471)
T PRK10504 317 VVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNS 392 (471)
T ss_pred HHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHH
Confidence 99999999998886555444444433333221 1111 223445566777777777888889999999998765
No 35
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=4.8e-31 Score=240.51 Aligned_cols=333 Identities=13% Similarity=0.114 Sum_probs=240.1
Q ss_pred chhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHH
Q psy8365 29 NIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSV 108 (381)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~ 108 (381)
+++.+.....+.+..+...++...+.+..|.+.+++|.|+.+.++..+.+.+++.+++++.|+++|| +|||+.+..+..
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~l~~~~~ 86 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDR-IGRRPVMLAGVA 86 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHH
Confidence 3455566666677777778888888888999999999999999999999999999999999999999 999999999998
Q ss_pred HHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhh
Q psy8365 109 LVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKY 188 (381)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (381)
...++.+.+.. +++++.+++.|+++|++.+...+...+.+.|++|+++|.+.+++......+|..++|.+++.+.++
T Consensus 87 ~~~~~~~~~~~---~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~ 163 (406)
T PRK15402 87 FFILTCLAILL---AQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHV 163 (406)
T ss_pred HHHHHHHHHHH---HccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88888776655 789999999999999998888888899999999999999999999888889999999999888775
Q ss_pred hhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhh
Q psy8365 189 VEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTS 268 (381)
Q Consensus 189 ~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (381)
. +||+ .+++.++...+ ..+.... .. |++++..+++.+.++...++++.++ +|+++...+..++....
T Consensus 164 ~------~w~~--~~~~~~~~~~~-~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 230 (406)
T PRK15402 164 L------PWRG--MFVLFAALAAL-SFFGLWR--AM-PETAGRVGEKLSLKELGRDYKLVLK-NRRFVAGALALGLVSLP 230 (406)
T ss_pred c------CccH--HHHHHHHHHHH-HHHHHHH--hC-CCCCccccccccHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHH
Confidence 4 7998 55544443322 2221111 11 1111110110011111223455566 78888777766666655
Q ss_pred hhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh-----cc--
Q psy8365 269 IFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH-----TM-- 341 (381)
Q Consensus 269 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~~-- 341 (381)
......+.|.|+++.+|.++.+.+.......++..++.++.+++.||+++|+..... ......+...... ..
T Consensus 231 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~ 309 (406)
T PRK15402 231 LLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMG-LWPMVAGLLLAALATVISSHAY 309 (406)
T ss_pred HHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH-HHHHHHHHHHHHHHHHcccccH
Confidence 556667788888888999999988887777788889999999999999988875443 3333333332221 11
Q ss_pred chhHHHHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 342 IDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 342 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
.......++.+++.+...+......... +++++|++.+
T Consensus 310 ~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~ 347 (406)
T PRK15402 310 LWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSA 347 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHH
Confidence 1223445567777776666555554443 3467887654
No 36
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=2e-31 Score=242.56 Aligned_cols=337 Identities=15% Similarity=0.126 Sum_probs=242.6
Q ss_pred hhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHH
Q psy8365 30 IQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVL 109 (381)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~ 109 (381)
++++..+.......+...++....+...|.+.+++|.++.+.+++.+...++..+++++.|+++|| +|||+.+..+.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~ 91 (398)
T TIGR00895 13 RYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADR-IGRKRVLLWSILL 91 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHH-hhhHHHHHHHHHH
Confidence 445556666666677777777778888899999999999999999999999999999999999999 9999999999988
Q ss_pred HHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 110 VVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
..++.++... +++++.+++.|++.|++.+...+...+++.|++|+++|++++++......+|..+++.+++.+.+..
T Consensus 92 ~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 168 (398)
T TIGR00895 92 FSVFTLLCAL---ATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF 168 (398)
T ss_pred HHHHHHHHHH---ccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc
Confidence 8888776655 7899999999999999999999999999999999999999999999999999999999998887755
Q ss_pred hccccccchhhHHHHHHHHHHHHHHHHHHHhhcccch----h-hHHHhh-------h---c-----ccCcccccc----c
Q psy8365 190 EKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDK----R-AERILN-------R---R-----NAGETEVAR----L 245 (381)
Q Consensus 190 ~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~-------~---~-----~~~~~~~~~----~ 245 (381)
|||+ .+++.+++..+..++........++ + +++..+ + + ++++++... .
T Consensus 169 ------g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (398)
T TIGR00895 169 ------GWRS--LFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVF 240 (398)
T ss_pred ------ccee--ehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHH
Confidence 6888 4444433333333222222211100 0 000000 0 0 000000001 1
Q ss_pred cccccc--CcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHH
Q psy8365 246 SDVKHF--PVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWV 323 (381)
Q Consensus 246 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~ 323 (381)
+.+++. .+..+...+..++..........+.| ++.+..|.++.+.+.......++.+++.++.+++.||+++|+. .
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~ 318 (398)
T TIGR00895 241 KALFQGKTARITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVT-A 318 (398)
T ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHH-H
Confidence 112220 23344444455555566666677778 5566689999999999999999999999999999999998843 4
Q ss_pred HHHHHHHHHHHHHHh-h-ccchhHHHHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 324 FISLMVSIVCHFMVG-H-TMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 324 ~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
.......+....+.. . +........++.+++.+...+...++..|.+|+++|+++.|
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g 377 (398)
T TIGR00895 319 LLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVG 377 (398)
T ss_pred HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 444333333333332 2 22234455667788888888888999999999999998876
No 37
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=4.9e-32 Score=244.94 Aligned_cols=324 Identities=17% Similarity=0.106 Sum_probs=232.7
Q ss_pred HHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhh
Q psy8365 42 LGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGA 121 (381)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~ 121 (381)
.++..++++..++...|.+.+++|.|+.+.|++.+.+.++..+++++.|+++|| +|||+.+..+.++..++.+++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~-- 79 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDR-SNPRVFLPIGLILCAIVNLFFGF-- 79 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHh-hCCeehhHHHHHHHHHHHHHHHH--
Confidence 355677788888999999999999999999999999999999999999999999 99999999999999888887766
Q ss_pred ccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhh-hhhHHHHhhhhccccccchhh
Q psy8365 122 YVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNM-FVAEPLYKYVEKFGLIGYQTL 200 (381)
Q Consensus 122 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~~~~~l~~~~~~~~~~gWr~~ 200 (381)
+++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++ .++..+.+.. +||+
T Consensus 80 -~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------~~~~- 151 (379)
T TIGR00881 80 -STSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY------SWHW- 151 (379)
T ss_pred -hhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcC------Cchh-
Confidence 689999999999999999999999999999999999999999999999999999999 4555554433 7998
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccchhhHHHh-h--h--ccc----C--c-c----cccccccccccCcchhhHHHHHHH
Q psy8365 201 GIVLLLAGMTCVLSLLCSLLLGCMDKRAERIL-N--R--RNA----G--E-T----EVARLSDVKHFPVSFWMVVVIIVS 264 (381)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~--~~~----~--~-~----~~~~~~~~~~~~~~~~~~~~~~~~ 264 (381)
.++..+++..+..++.... .+++++++.. + + +++ + + + .+...++.++ +|.+|...+..++
T Consensus 152 -~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 227 (379)
T TIGR00881 152 -VFIVPGIIAIIVSLICFLL--LRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLL-NKVLWYISLGYVF 227 (379)
T ss_pred -HHHHHHHHHHHHHHHHhee--eCCCccccccCccccCcccccccccccccccccchHHHHHHHHh-cchHHHHHHHHHH
Confidence 5555544333333322221 1111111000 0 0 000 0 0 0 0011233344 6788888888888
Q ss_pred hhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcc-hHHHH-HHHHHHHHHHHHHHhhc-c
Q psy8365 265 YYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGR-NLFWV-FISLMVSIVCHFMVGHT-M 341 (381)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~-r~~~~-~~~~~~~~~~~~~~~~~-~ 341 (381)
..........+.|.|+++..|.++.+.+.......++..++.++.+++.||..+ |+... .........+....... .
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (379)
T TIGR00881 228 VYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPA 307 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcc
Confidence 888888888999999999899999999999999999999999999999998643 33222 22222222222222221 1
Q ss_pred -chhH--HHHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 342 -IDPH--ITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 342 -~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
.... ......+.......+....+..|.+|++.||++.|
T Consensus 308 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g 349 (379)
T TIGR00881 308 ANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAG 349 (379)
T ss_pred hhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHH
Confidence 1112 22223333333334455678899999999998876
No 38
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=2.5e-30 Score=238.21 Aligned_cols=336 Identities=15% Similarity=0.159 Sum_probs=241.4
Q ss_pred chhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHH
Q psy8365 29 NIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSV 108 (381)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~ 108 (381)
..++|.++...++....++......+...|.+.+++|.|.++.+++.+.+.++..++.++.|+++|| +|||+.++.+.+
T Consensus 14 ~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~g~r~~l~~~~~ 92 (455)
T TIGR00892 14 GGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNR-FGCRPVVIAGGL 92 (455)
T ss_pred CCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHH-cCchHHHHhhHH
Confidence 3456777777666666666666778888999999999999999999999999999999999999999 999999999998
Q ss_pred HHHHHHHHHHhhhccchhHHHHH-HHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHh
Q psy8365 109 LVVIGQLVFALGAYVDSLFITIL-GRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYK 187 (381)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (381)
+..++.+++.. +++++.+++ .|+++|++.+...+...+++.++++ ++|+++.++.+.+..+|..++|.+++.+.+
T Consensus 93 ~~~~~~~~~~~---~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~ 168 (455)
T TIGR00892 93 LASLGMILASF---SSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFE 168 (455)
T ss_pred HHHHHHHHHHH---hhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 88888776655 688888865 5789999988777777888899996 889999999999999999999999998887
Q ss_pred hhhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhH--HHhhhcc---c-Cccc------ccccc-----cccc
Q psy8365 188 YVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAE--RILNRRN---A-GETE------VARLS-----DVKH 250 (381)
Q Consensus 188 ~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~-~~~~------~~~~~-----~~~~ 250 (381)
.. |||+ .++..+++..+. .+...+....+++++ +..++++ + ..++ ....+ +.++
T Consensus 169 ~~------gwr~--~f~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (455)
T TIGR00892 169 SF------GWRG--SFLILGGLLLHC-CVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFT 239 (455)
T ss_pred Hh------ChHH--HHHHHHHHHHHH-HHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhc
Confidence 65 7999 666665543322 222222211111100 0000000 0 0000 00011 2344
Q ss_pred cCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhh--cchHHHH-HHHH
Q psy8365 251 FPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKT--GRNLFWV-FISL 327 (381)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~--g~r~~~~-~~~~ 327 (381)
+|+++......++.....+....+++.|.++ .|++..+++...+...++.++++++.|++.||. ++|+... ..+.
T Consensus 240 -~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 317 (455)
T TIGR00892 240 -HRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFAL 317 (455)
T ss_pred -CchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHH
Confidence 6778877777777777777778889998876 799999999999999999999999999999974 2333222 2222
Q ss_pred HHHHHHHHHHhh--ccchhHHHHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 328 MVSIVCHFMVGH--TMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 328 ~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
.....+.++... +.+...+...+.|++.+...+...+...|.+|++++++++|
T Consensus 318 ~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g 372 (455)
T TIGR00892 318 LFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVG 372 (455)
T ss_pred HHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHh
Confidence 222222222222 22233445667778777777888899999999999998876
No 39
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.98 E-value=2e-30 Score=235.09 Aligned_cols=330 Identities=14% Similarity=0.093 Sum_probs=245.0
Q ss_pred HHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHH
Q psy8365 36 LLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQL 115 (381)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~ 115 (381)
+.+++...+..++.....++..|.+++++|.|+.+.|++.+.+.+++.+++++.|++.|| +|||+++..+.++.+++.+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r-~G~r~~~~~g~~l~~~g~~ 83 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKK-LSYKAGILLGLFLYALGAF 83 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHH
Confidence 445556667777777888899999999999999999999999999999999999999999 9999999999999999988
Q ss_pred HHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhc----
Q psy8365 116 VFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEK---- 191 (381)
Q Consensus 116 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~---- 191 (381)
++......++++.+++.|++.|+|.+...+..+.++.+..|+++|++..++.+...++|..+++.+++.+......
T Consensus 84 l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~ 163 (410)
T TIGR00885 84 LFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQ 163 (410)
T ss_pred HHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchh
Confidence 7654434578999999999999999999999999999999999999999999999999999999999888643210
Q ss_pred ----------------cccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcch
Q psy8365 192 ----------------FGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSF 255 (381)
Q Consensus 192 ----------------~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (381)
....+||+ .+...+++..+..++ ....+.|+.++ +++++++...+.+++++ +|++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~w~~--~fl~~a~~~~~~~~~---~~~~~~p~~~~---~~~~~~~~~~~~~~~~~-~~~~ 234 (410)
T TIGR00885 164 DVLDKLSPEELSAIKHSDLASVQT--PYMIIGAVVLAVALL---IMLTKMPALNH---SDAKQISFSASLSRLAR-IRHY 234 (410)
T ss_pred hhhhhcCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH---HHHhcCCCCCc---cccccccchhhHHHHHh-ChhH
Confidence 00126998 666665533332221 11111222111 11111111223345666 6888
Q ss_pred hhHHHHHHHhhhhhhcchhhHHHHHHHhc-CCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHH
Q psy8365 256 WMVVVIIVSYYTSIFPFVSLAQELFVKRF-NLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCH 334 (381)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 334 (381)
+...+..++.........++++.|.++.. +.+...++...+.......+++++++++.||+++|+.+........+...
T Consensus 235 ~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~l 314 (410)
T TIGR00885 235 REGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCL 314 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 88777788877777777888999887632 44444455566666778899999999999999998886555555544444
Q ss_pred HHHhhccchhHHHHHHHHHHHHhhhcchhhhhhhcccCCcc
Q psy8365 335 FMVGHTMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQL 375 (381)
Q Consensus 335 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~ 375 (381)
+............+.+.+++.+.++|..++...+..+++.+
T Consensus 315 l~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~ 355 (410)
T TIGR00885 315 GSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTK 355 (410)
T ss_pred HHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 44333333445666777888888889999999999988754
No 40
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.98 E-value=4.5e-30 Score=236.01 Aligned_cols=339 Identities=13% Similarity=0.053 Sum_probs=233.4
Q ss_pred hHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHH
Q psy8365 31 QRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLV 110 (381)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~ 110 (381)
.++..+....+.+...+.++.......|.+++ +|+|+++.+++.+++.++..+++++.|+++|| +|||+.+..+.++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~~~~~~~~~~~~ 101 (438)
T TIGR00712 24 LRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILS 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhc-cCCceehHHHHHHH
Confidence 35666666666777777788777777888876 59999999999999999999999999999999 99999999998888
Q ss_pred HHHHHHHHhhh-ccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 111 VIGQLVFALGA-YVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 111 ~~~~~~~~~~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
+++.+++.... ..++++.+.+.|++.|++.+..++.....+.|++|+++|++++++.+...++|..+++.+.+...+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 181 (438)
T TIGR00712 102 AAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF 181 (438)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 88877654421 12567888899999999999888988999999999999999999999999999999888776554432
Q ss_pred hccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHH---hhh-cc-------cCcccccccc-----cccccCc
Q psy8365 190 EKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERI---LNR-RN-------AGETEVARLS-----DVKHFPV 253 (381)
Q Consensus 190 ~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~-------~~~~~~~~~~-----~~~~~~~ 253 (381)
. +||+ .++..+++..+..++..... +++++++. .++ ++ ++++++.+.+ ..++ ++
T Consensus 182 ~-----~w~~--~f~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 251 (438)
T TIGR00712 182 N-----DWHA--ALYFPAICAIIVALFAFAMM--RDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLP-NK 251 (438)
T ss_pred h-----hhHH--HHHHHHHHHHHHHHHHHHhc--cCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHcc-Cc
Confidence 1 7998 56555554444333332222 22221100 000 00 0000111111 2345 68
Q ss_pred chhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHH--HHHHH
Q psy8365 254 SFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFIS--LMVSI 331 (381)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~--~~~~~ 331 (381)
.+|...+..++.+...+...+|.|.|+++..|.++.++++......+.+++++++.|++.||+++++...... .....
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 331 (438)
T TIGR00712 252 LLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVT 331 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHH
Confidence 8888877777777777788899999999988999999999999999999999999999999996433212211 11111
Q ss_pred HHHHHHhhc-cch-hHHHHHHHHHHHHhhhcc--hhhhhhhcccCCcccccccC
Q psy8365 332 VCHFMVGHT-MID-PHITMVMMGIAYSMVASG--LWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 332 ~~~~~~~~~-~~~-~~~~~~~~g~~~~~~~~~--~~~~~~~~~p~~~~g~~~g~ 381 (381)
.+....... ... ......++.++.+...+. ......|.+|++.||++.|+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 385 (438)
T TIGR00712 332 IAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGF 385 (438)
T ss_pred HHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhh
Confidence 222221111 111 111222333333332322 23467799999999998874
No 41
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.98 E-value=6.1e-30 Score=239.47 Aligned_cols=335 Identities=15% Similarity=0.125 Sum_probs=231.0
Q ss_pred hhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHH
Q psy8365 30 IQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVL 109 (381)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~ 109 (381)
+.+|..+..+++..+.+.++....++..|.+.+++|.|+.+.+++.+.+.+++.+++++.|+++|| +|||+.+..+.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~ 94 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDR-YGRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHH
Confidence 456677778888888889999999999999999999999999999999999999999999999999 9999999999988
Q ss_pred HHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 110 VVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
.+++.+++.. +++++.+++.|++.|++.+...+....++.|++|+|+|++++++...+..+|..+++.+.+.+.+..
T Consensus 95 ~~~~~~~~~~---~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 171 (496)
T PRK03893 95 FSVGTLACGF---APGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVW 171 (496)
T ss_pred HHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 8888876665 7899999999999999999999999999999999999999999999999999999999998887654
Q ss_pred hccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcch--------------
Q psy8365 190 EKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSF-------------- 255 (381)
Q Consensus 190 ~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 255 (381)
+||+ .++ ++++..++. +......+++++..++++++++.+...+...+.+++.
T Consensus 172 ------~w~~--~f~-~~~~~~~~~----~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (496)
T PRK03893 172 ------GWRA--LFF-IGILPIIFA----LWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALW 238 (496)
T ss_pred ------CHHH--HHH-HHHHHHHHH----HHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHH
Confidence 7998 443 333222221 1111111111111111111100000000000000000
Q ss_pred ----------h-----------------------------hHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHH
Q psy8365 256 ----------W-----------------------------MVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNS 296 (381)
Q Consensus 256 ----------~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 296 (381)
| ......+......+....++|.|+++.+|++..+.+.+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~ 318 (496)
T PRK03893 239 FCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLF 318 (496)
T ss_pred HHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHH
Confidence 0 0000011111111234567899998889999999999999
Q ss_pred HHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhccchhH-HHHHHH--HHHHHhhhcchhhhhhhcccCC
Q psy8365 297 IVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMIDPH-ITMVMM--GIAYSMVASGLWPLIALVIPEY 373 (381)
Q Consensus 297 ~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--g~~~~~~~~~~~~~~~~~~p~~ 373 (381)
...++..++.++.|++.||++||+..........+..+.+......... .....+ +.......+...++.+|.+|++
T Consensus 319 ~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (496)
T PRK03893 319 FSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTE 398 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHH
Confidence 9999999999999999999999887554433333222222222122211 111111 2222223455667889999999
Q ss_pred cccccccC
Q psy8365 374 QLGTAYGM 381 (381)
Q Consensus 374 ~~g~~~g~ 381 (381)
+||+++|+
T Consensus 399 ~~g~~~~~ 406 (496)
T PRK03893 399 QRAAGLGF 406 (496)
T ss_pred Hhhcccch
Confidence 99998874
No 42
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.97 E-value=4.5e-30 Score=232.00 Aligned_cols=318 Identities=12% Similarity=0.095 Sum_probs=224.8
Q ss_pred HHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHH
Q psy8365 37 LLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLV 116 (381)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~ 116 (381)
....+..+..........+..|.+++|+|.+.++.|++.+.+.+++.+++++.|++.|| +|||+++..+.++.+++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~l 84 (382)
T PRK10091 6 LSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSR-YSLKHILLFLVALCVIGNAM 84 (382)
T ss_pred HHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHcc-CccHHHHHHHHHHHHHHHHH
Confidence 34444556666666677788899999999999999999999999999999999999999 99999999999999988886
Q ss_pred HHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcccccc
Q psy8365 117 FALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIG 196 (381)
Q Consensus 117 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~g 196 (381)
+.. ++|++.+++.|+++|++.+...+....++.|++|+++|++++++...+..+|..+++.+++.+.+.. |
T Consensus 85 ~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------g 155 (382)
T PRK10091 85 FTL---SSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF------S 155 (382)
T ss_pred HHH---hCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc------c
Confidence 665 7999999999999999999888888899999999999999999999999999999999998887754 7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhH
Q psy8365 197 YQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLA 276 (381)
Q Consensus 197 Wr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (381)
||+ .++..+++..+..+. . .... |+.++ + ++.+.+..++ .++ +++.|......++.....+....+.
T Consensus 156 wr~--~f~~~~~~~~~~~~~-~--~~~l-p~~~~---~--~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (382)
T PRK10091 156 WRY--TFLLIAVFNIAVLAS-I--YFWV-PDIRD---E--AKGGLREQFH-FLR-SPAPWLIFAATMFGNAGVFAWFSYI 222 (382)
T ss_pred HHH--HHHHHHHHHHHHHHH-H--HHhC-CCCCc---c--cccCHHHHHH-Hhc-ChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998 555555433222221 1 1111 11111 0 0111111222 334 4666766555555544555556677
Q ss_pred HHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhcc--chhHHHHHHHHHH
Q psy8365 277 QELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTM--IDPHITMVMMGIA 354 (381)
Q Consensus 277 ~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~ 354 (381)
++++++.+|.++.+.+...+...++.++++++.+++.||+++|+..........+..+.+..... +...+...+.+.+
T Consensus 223 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g 302 (382)
T PRK10091 223 KPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAG 302 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 88888888999999999999999999999999999999999888755444433322222222211 1222233334444
Q ss_pred HHhhhcchh-hhhhhcccCCcccc
Q psy8365 355 YSMVASGLW-PLIALVIPEYQLGT 377 (381)
Q Consensus 355 ~~~~~~~~~-~~~~~~~p~~~~g~ 377 (381)
.+...+... ....+..|++.++.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~ 326 (382)
T PRK10091 303 LFALSAPLQILLLQNAKGGELLGA 326 (382)
T ss_pred HHhhhHHHHHHHHHhCCcchHHHH
Confidence 433333222 34445455555554
No 43
>KOG1330|consensus
Probab=99.97 E-value=1.7e-31 Score=230.62 Aligned_cols=340 Identities=16% Similarity=0.163 Sum_probs=249.1
Q ss_pred ccchhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHH
Q psy8365 27 HHNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIY 106 (381)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~ 106 (381)
...+..+..+.++++....++.+++.+....+.+++.+|++++..|++.+.+.+.+.+++|+.|+++|| ++||+++.+|
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadr-yNR~~v~~vG 104 (493)
T KOG1330|consen 26 LSMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADR-YNRKRVIAVG 104 (493)
T ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhh-cCcceEEeeH
Confidence 344566777888999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHH
Q psy8365 107 SVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLY 186 (381)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 186 (381)
..++.++.+...+ ++.||++.+.|.+.|+|.+...+.++++++|.+|+++|++++++++.+.++|..+|.+.+..+.
T Consensus 105 ~~iW~~Av~~~~f---s~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va 181 (493)
T KOG1330|consen 105 IFIWTLAVFASGF---SNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVA 181 (493)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeec
Confidence 9999998886666 6999999999999999999999999999999999999999999999999999999999998887
Q ss_pred hhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccC----ccccccccccccc--CcchhhHHH
Q psy8365 187 KYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAG----ETEVARLSDVKHF--PVSFWMVVV 260 (381)
Q Consensus 187 ~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~ 260 (381)
+... .||| .+...+++..+++++..++ .++|+++..++.+.+ ++....+||++.. ++.+....+
T Consensus 182 ~~~~-----~Wr~--af~~~avl~vi~~~L~~~f---~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl 251 (493)
T KOG1330|consen 182 SLTF-----WWRW--AFRGSAVLGVIVGLLVFLF---VREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSL 251 (493)
T ss_pred cCcc-----ceEE--EEEeehHHHHHHHHHHHhh---ccCcccccccccccCCcCCCCccchHHHHHHHHccCceeeehH
Confidence 7653 3999 7777776655555444332 222222111111111 1223345555442 466666677
Q ss_pred HHHHhhhhhhcchhhHHHHHHHh---cCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcc--------hHHHH--HHHH
Q psy8365 261 IIVSYYTSIFPFVSLAQELFVKR---FNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGR--------NLFWV--FISL 327 (381)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~--------r~~~~--~~~~ 327 (381)
......+....+..|.|.+.... .|.+..+..++..+...++.+|.+++|.++||+.| |.-.+ ..+.
T Consensus 252 ~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~ 331 (493)
T KOG1330|consen 252 GIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGA 331 (493)
T ss_pred HHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhh
Confidence 77777777667667777655443 45566666677788889999999999999999532 11111 1222
Q ss_pred HHHHHHHHHHhh-ccchhH--HHHHHHHHHHHhhh-cchhhhhhhcccCCccccccc
Q psy8365 328 MVSIVCHFMVGH-TMIDPH--ITMVMMGIAYSMVA-SGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 328 ~~~~~~~~~~~~-~~~~~~--~~~~~~g~~~~~~~-~~~~~~~~~~~p~~~~g~~~g 380 (381)
..++..+.+... .....+ +.++++|....... .....+..|++|++.|.++++
T Consensus 332 ~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a 388 (493)
T KOG1330|consen 332 PLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYA 388 (493)
T ss_pred hHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHH
Confidence 222222222222 222233 33344444444433 455678889999999998865
No 44
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=3.7e-30 Score=232.61 Aligned_cols=315 Identities=13% Similarity=0.119 Sum_probs=225.2
Q ss_pred hhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHH
Q psy8365 49 CYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFI 128 (381)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (381)
....+.+..|.+.+++|+|+++.+++.+++.++..+++++.|+++|| +|||+.+..+.++.+++...+.. +++++.
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~i~~~~~~~---~~~~~~ 81 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADS-FGRKPVILGGTLVFALAAVACAL---AQTIDQ 81 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhh-cCChHHHHHHHHHHHHHHHHHHH---HccHHH
Confidence 33456688899999999999999999999999999999999999999 99999999999998888887665 689999
Q ss_pred HHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHH
Q psy8365 129 TILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAG 208 (381)
Q Consensus 129 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~ 208 (381)
+++.|+++|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+.. +||+ .++..+.
T Consensus 82 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------~~~~--~~~~~~~ 153 (377)
T PRK11102 82 LIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF------SWHA--IFWVLAL 153 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------ChHH--HHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999887765 6998 5544444
Q ss_pred HHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCCh
Q psy8365 209 MTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDS 288 (381)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 288 (381)
+..+..+.... ..+++++++.+++.+.++...++++.++ +|+++...+..++.....+.+..+.|.++.+.+|.++
T Consensus 154 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~ 229 (377)
T PRK11102 154 AAILAAALVFF---FIPETLPKERRQPFHLRTTIRNFASLFR-HKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSP 229 (377)
T ss_pred HHHHHHHHHHH---hCCccCcccccCCCChHHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCH
Confidence 33222222111 1121111110000000111123344555 6777776666666666666667777888888889999
Q ss_pred hhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh--ccch---hHHHHHHHHHHHHhhhcchh
Q psy8365 289 DAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH--TMID---PHITMVMMGIAYSMVASGLW 363 (381)
Q Consensus 289 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~g~~~~~~~~~~~ 363 (381)
.+.+.......+..+++.++.+++.||+|+|+..........+.+...... .... ......+++.+.+...+...
T Consensus 230 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (377)
T PRK11102 230 QNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAM 309 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHH
Confidence 999999999999999999999999999999887555443322222222211 1111 12222233333333444445
Q ss_pred hhhhhcccCCccccccc
Q psy8365 364 PLIALVIPEYQLGTAYG 380 (381)
Q Consensus 364 ~~~~~~~p~~~~g~~~g 380 (381)
....|..| +.+|++.+
T Consensus 310 ~~~~~~~~-~~~g~~~~ 325 (377)
T PRK11102 310 AVILDEFP-HMAGTASS 325 (377)
T ss_pred HHHhcccc-ccchHHHH
Confidence 66677766 66777654
No 45
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.97 E-value=1.2e-29 Score=230.68 Aligned_cols=311 Identities=13% Similarity=0.111 Sum_probs=212.8
Q ss_pred hhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhc-cchhHHHHHHH
Q psy8365 55 SLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAY-VDSLFITILGR 133 (381)
Q Consensus 55 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r 133 (381)
...+.+.+|+|.|+++.|++.+.+.+++.+++++.|++.|| +||||.+..+..+.+++.+++..... .++++.+++.|
T Consensus 34 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr-~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 112 (402)
T TIGR00897 34 GWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEI-IGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFY 112 (402)
T ss_pred HhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHH
Confidence 34456668899999999999999999999999999999999 99999999999988887665432222 35788999999
Q ss_pred HHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhh-HhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHH
Q psy8365 134 FIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGS-TVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCV 212 (381)
Q Consensus 134 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~~~~ 212 (381)
+++|++.+...+...+.+.+++|+|+|++++|+.+...++|. .+++.+++.+.+.. ||+. .++.......
T Consensus 113 ~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~------g~~~--~~~~~~~~~~- 183 (402)
T TIGR00897 113 GIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF------GEMN--TLWSALAFVL- 183 (402)
T ss_pred HHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc------chHH--HHHHHHHHHH-
Confidence 999999888888888889999999999999999999999997 57888888877655 4443 1111111111
Q ss_pred HHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhh
Q psy8365 213 LSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAAN 292 (381)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 292 (381)
+..+....+ .++++++++.+++++.++.+..++++++ +|++|...+..++.....+...++.|.|+++ +|+++.+.+
T Consensus 184 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~ 260 (402)
T TIGR00897 184 TGGVIALFS-NKDIFTPQHMQTREKFSELGKAATILFT-NPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWL 260 (402)
T ss_pred HHHHHHHhc-cCCCCCcccccCCcchhhHHHHHHHHHc-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHH
Confidence 111111111 2222111111110111111122445666 7888888888887777888888999988855 899999999
Q ss_pred hhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHH-HHHHHHHHHhh----cc--chhHHHHHHHHHHHHhhhcchhhh
Q psy8365 293 RLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLM-VSIVCHFMVGH----TM--IDPHITMVMMGIAYSMVASGLWPL 365 (381)
Q Consensus 293 ~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~-~~~~~~~~~~~----~~--~~~~~~~~~~g~~~~~~~~~~~~~ 365 (381)
...+...+++.++++..|++.||++||+.....+.. ..+.+..+... .. +...+...+.|++.+...+. ...
T Consensus 261 ~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~ 339 (402)
T TIGR00897 261 QIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAV 339 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 888888999999999999999999988765432222 22222222111 11 11223445556665554443 455
Q ss_pred hhhcccCCccccccc
Q psy8365 366 IALVIPEYQLGTAYG 380 (381)
Q Consensus 366 ~~~~~p~~~~g~~~g 380 (381)
..|..| ++||++.|
T Consensus 340 ~~~~~~-~~~g~~~g 353 (402)
T TIGR00897 340 FPTLAP-KHKGAAMS 353 (402)
T ss_pred HHhhCc-chhHHHHH
Confidence 667554 57998876
No 46
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.97 E-value=1.3e-29 Score=230.69 Aligned_cols=264 Identities=13% Similarity=0.125 Sum_probs=203.3
Q ss_pred HHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHh
Q psy8365 40 CLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFAL 119 (381)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~ 119 (381)
.+..+...+......+..|.+.+++|.+.++.++..+++.+++.++++++|+++|| +|||+++..+.++.+++.+++..
T Consensus 22 ~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~ 100 (413)
T PRK15403 22 ILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDR-IGRRPVLITGALIFTLACAATLF 100 (413)
T ss_pred HHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHH-cCchHHHHHHHHHHHHHHHHHHH
Confidence 44455567777888899999999999999999999999999999999999999999 99999999999999888887765
Q ss_pred hhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchh
Q psy8365 120 GAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQT 199 (381)
Q Consensus 120 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~ 199 (381)
+++++.++++|+++|++.+...+....++.|++|+++|++++++......+|..+||.+++.+.++. |||+
T Consensus 101 ---a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~------gw~~ 171 (413)
T PRK15403 101 ---TTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV------HWKV 171 (413)
T ss_pred ---cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CHHH
Confidence 7999999999999999987767777788999999999999999999999999999999999887654 7999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHH
Q psy8365 200 LGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQEL 279 (381)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (381)
.|+..++... +..+.... ..+ +.++..+++.+.++...+++++++ +|++|...+..++.....+.+..+.|.+
T Consensus 172 --~f~~~~~~~~-i~~~~~~~--~lp-~~~~~~~~~~~~~~~~~~~~~ll~-~~~~~~~~l~~~~~~~~~~~~~~~~P~~ 244 (413)
T PRK15403 172 --LFAIIAVMGL-IAFVGLLL--AMP-ETVKRGAVPFSAKSVLRDFRNVFR-NRLFLTGAATLSLSYIPMMSWVAVSPVI 244 (413)
T ss_pred --HHHHHHHHHH-HHHHHHHH--hCC-CCccccCCCCChHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 5555544322 22222111 111 111110000011111224455666 7999988887777777777777888999
Q ss_pred HHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchH
Q psy8365 280 FVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNL 320 (381)
Q Consensus 280 ~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~ 320 (381)
+++.+|.++.+.++.......+..++..+.+.+.+|..+++
T Consensus 245 l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~ 285 (413)
T PRK15403 245 LIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPR 285 (413)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchh
Confidence 99988999999999887777888887777777665444433
No 47
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.97 E-value=1.3e-29 Score=236.26 Aligned_cols=335 Identities=17% Similarity=0.197 Sum_probs=222.3
Q ss_pred HHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCC--------hHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhh
Q psy8365 32 RVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLT--------NAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGS 103 (381)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--------~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~ 103 (381)
.+....++.+..+...++....++..|.+.++++.+ ..+.+++.+++.++..++++++|+++|| +|||+++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~grr~~~ 104 (481)
T TIGR00879 26 VALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDR-FGRKKSL 104 (481)
T ss_pred HHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhh-hhhHHHH
Confidence 333344444455667777888888888888888777 8999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhh-
Q psy8365 104 TIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVA- 182 (381)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~- 182 (381)
.++.++..++.+++.......+++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~ 184 (481)
T TIGR00879 105 LIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGS 184 (481)
T ss_pred HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999998887755444456779999999999999999999999999999999999999999999999999999887
Q ss_pred --HHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhh--------HHHh---hhc-ccCccc-------
Q psy8365 183 --EPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRA--------ERIL---NRR-NAGETE------- 241 (381)
Q Consensus 183 --~~l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~---~~~-~~~~~~------- 241 (381)
....+. .+||+ .+++ .++..++.++....+ .+.+. ++.. ++. +.++++
T Consensus 185 ~~~~~~~~------~~w~~--~f~~-~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (481)
T TIGR00879 185 GKVSLNNT------LGWRI--PLGL-QLIPAGLLFLGLFFL--PESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDEL 253 (481)
T ss_pred HhhcCCCC------ccHHH--HHHH-HHHHHHHHHHHHhcC--CCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHH
Confidence 322222 27998 4444 333333333222221 11110 0000 000 000000
Q ss_pred --------------cccccccccc-----CcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHH
Q psy8365 242 --------------VARLSDVKHF-----PVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTIS 302 (381)
Q Consensus 242 --------------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 302 (381)
+..+++.++. ++.++...+..+...........+.|.+. +..|++..+.+.......++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~ 332 (481)
T TIGR00879 254 ELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIF-ENAGVSTDHAFLVSIIVGAVN 332 (481)
T ss_pred HHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHH-HHcCCCchHHHHHHHHHHHHH
Confidence 0001122221 12223333333333334444455566554 557999888888888889999
Q ss_pred hhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHh---h--cc-------chhHHHHHHHHHHHHh-hhcchhhhhhhc
Q psy8365 303 AFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVG---H--TM-------IDPHITMVMMGIAYSM-VASGLWPLIALV 369 (381)
Q Consensus 303 ~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~---~--~~-------~~~~~~~~~~g~~~~~-~~~~~~~~~~~~ 369 (381)
+++.++.|++.||++||+......... .++..... . .. ........+++.+.+. ..+....+..|.
T Consensus 333 ~~~~~~~g~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (481)
T TIGR00879 333 FAFTFVAIFLVDRFGRRPLLLIGAAGM-AICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEI 411 (481)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHH-HHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhcc
Confidence 999999999999999998865543333 33333322 1 11 1112222333333333 346667788999
Q ss_pred ccCCccccccc
Q psy8365 370 IPEYQLGTAYG 380 (381)
Q Consensus 370 ~p~~~~g~~~g 380 (381)
+|++.|+++.|
T Consensus 412 ~p~~~~~~~~~ 422 (481)
T TIGR00879 412 FPLSLRPKGIS 422 (481)
T ss_pred CChHHHHHHHH
Confidence 99999998775
No 48
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.97 E-value=1.5e-29 Score=230.23 Aligned_cols=317 Identities=15% Similarity=0.147 Sum_probs=220.5
Q ss_pred HHHHHHHHHhhhhhhcCchhhHHH-HHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHH
Q psy8365 36 LLLMCLLGFGSYFCYDNPSSLEEH-FTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQ 114 (381)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~ 114 (381)
+..+.+..+...++.....+..|. +++++|.|+.+.|++.+.+.+++.+++++.|+++|| +||||++..+.++.+++.
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr-~g~r~~l~~~~~~~~~~~ 95 (399)
T PRK05122 17 IVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADT-LGPKKAVVFGLCGCALSG 95 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhc-cCCcchHHHHHHHHHHHH
Confidence 344555566666777777777776 678999999999999999999999999999999999 999999999998888776
Q ss_pred HHHHhhhccc-----hhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 115 LVFALGAYVD-----SLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 115 ~~~~~~~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
+.+....+.+ +++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+....+|.++|+.+++.+.+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 175 (399)
T PRK05122 96 LLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWG 175 (399)
T ss_pred HHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcc
Confidence 6655433232 57789999999999999999999999999999999999999999999999999999999888765
Q ss_pred hccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhh
Q psy8365 190 EKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSI 269 (381)
Q Consensus 190 ~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (381)
|||+ .+....+ ..++..+... ..++ ++. + ++++.++++.+ ++.+.......+.....
T Consensus 176 ------g~~~--~~~~~~~----~~~~~~~~~~-~~~~-~~~----~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 232 (399)
T PRK05122 176 ------GLAG--LGLLIML----LALLGLLLAR-PRPA-VPP----V--KGERLPFRRVL---GRVWPYGMGLALASIGF 232 (399)
T ss_pred ------cHHH--HHHHHHH----HHHHHHHHHh-cCCC-CCC----C--CccchhHHHHH---HHHHHHHHHHHHHHHHH
Confidence 6887 3332222 2222222221 1111 110 0 01111222222 22333333333334444
Q ss_pred hcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhc--cchhHHH
Q psy8365 270 FPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHT--MIDPHIT 347 (381)
Q Consensus 270 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 347 (381)
.....+.+.|+++ .|. .+.+.......++.+++.+..|++.||+++|+....... ....+....... .+...+.
T Consensus 233 ~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 308 (399)
T PRK05122 233 GTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLL-VEILGLLLLWLAPSPWMALIG 308 (399)
T ss_pred HHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH-HHHHHHHHHHHhccHHHHHHH
Confidence 5566777887765 455 345666677788888999999999999998887544333 333333333332 2223344
Q ss_pred HHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 348 MVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 348 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
.++.|++.+...+.......|..|+++||+++|
T Consensus 309 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g 341 (399)
T PRK05122 309 AALTGFGFSLVFPALGVEAVKRVPPQNRGAALG 341 (399)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 556777777777776777888999999998876
No 49
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=2.8e-29 Score=228.11 Aligned_cols=327 Identities=12% Similarity=0.119 Sum_probs=226.6
Q ss_pred HhhhhhhcCchhhHHHHHhhhc--CChHHHHHHHHH-----hhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHH
Q psy8365 44 FGSYFCYDNPSSLEEHFTTDMH--LTNAQYMNLYSW-----YSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLV 116 (381)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~--~s~~~~g~~~s~-----~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~ 116 (381)
+.+++++..++...+.+.+++. .++++.+.+.+. ..++..+++++.|+++|| +|||+++..+.++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~ 81 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDR-IGRKKTLVITLLMMGIGTLL 81 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhh-hhhHHHHHHHHHHHHHHHHH
Confidence 4567777777777788877754 445666654443 334445789999999999 99999999999999888887
Q ss_pred HHhhhccchhH--------HHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhh
Q psy8365 117 FALGAYVDSLF--------ITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKY 188 (381)
Q Consensus 117 ~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (381)
+.. +++++ .+++.|+++|++.+...+...+++.|++|+++|++..++.+.+..+|.++++.++..+...
T Consensus 82 ~~~---~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~ 158 (394)
T TIGR00883 82 IGL---LPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYL 158 (394)
T ss_pred Hhh---CCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 765 56664 5889999999999999999999999999999999999999999999999999887766542
Q ss_pred hhcc--ccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccC-cchhhHHHHHHHh
Q psy8365 189 VEKF--GLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFP-VSFWMVVVIIVSY 265 (381)
Q Consensus 189 ~~~~--~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 265 (381)
.+.. ...+||+ .+.+. .+..++... .....+++++. .++++++++++.+.++..+.+ +.++......++.
T Consensus 159 ~~~~~~~~~~w~~--~~~~~-~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (394)
T TIGR00883 159 LGDDALLEWGWRI--PFLVS-AVLVLIGLY---LRRNLEETPVF-EKAQEKHKKKRGPIRETLTKHRKPFLLGLGLVIAT 231 (394)
T ss_pred cCHHHhhccchHH--HHHHH-HHHHHHHHH---HHHhcCCChhH-HHHHhccccccCCHHHHHHhchHHHHHHHHHHHHH
Confidence 2211 1127998 44332 222222221 11111221111 111111222233344444422 2366666666666
Q ss_pred hhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHH-Hhh--cc-
Q psy8365 266 YTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFM-VGH--TM- 341 (381)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~--~~- 341 (381)
....+....+.|.|+++.+|.++.+.+.......+...++.++.|++.||++||+.....+......+... ... ..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (394)
T TIGR00883 232 TTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGS 311 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 77777778889999988889999999999999999999999999999999999987665544443333221 111 11
Q ss_pred -chhHHHHHHHHHHHHhhhcchhhhhhhcccCCcccccccC
Q psy8365 342 -IDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 342 -~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
+.......+.+++.+...+...++..|.+|+++|+++.|+
T Consensus 312 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 352 (394)
T TIGR00883 312 FTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASL 352 (394)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeee
Confidence 1222334556666667778889999999999999988763
No 50
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.97 E-value=4.7e-29 Score=232.56 Aligned_cols=344 Identities=18% Similarity=0.140 Sum_probs=223.6
Q ss_pred hhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhh--------cCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchh
Q psy8365 30 IQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDM--------HLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRM 101 (381)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~ 101 (381)
+.......+..+..+...++...+++..|.+++++ +.++.+.+++.+.+.++..++++++|+++|| +|||+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr-~Grr~ 86 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNR-FGRRD 86 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHH
Confidence 34455566666778888999999999989998887 8899999999999999999999999999999 99999
Q ss_pred hhHHHHHHHHHHHHHHHhhhc---------cchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHh
Q psy8365 102 GSTIYSVLVVIGQLVFALGAY---------VDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSR 172 (381)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 172 (381)
++.++.++..++.+..+...+ .++++.+++.|+++|++.|...+...++++|++|+|+|++++++.+.+..
T Consensus 87 ~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~ 166 (479)
T PRK10077 87 SLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAII 166 (479)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHH
Confidence 999999998888776654210 13367788999999999999999999999999999999999999999999
Q ss_pred HhhHhhhhhhHHHHhhhhc--cccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHH-hh-hc---------ccCc
Q psy8365 173 VGSTVNMFVAEPLYKYVEK--FGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERI-LN-RR---------NAGE 239 (381)
Q Consensus 173 ~g~~~g~~~~~~l~~~~~~--~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~---------~~~~ 239 (381)
+|.++++.++..+....+. ....|||+ .+++.++ ..++..+.... ..++++... .+ ++ ...+
T Consensus 167 ~G~~~~~~~~~~~~~~~~~~~~~~~gWr~--~f~~~~~-~~~~~~~~~~~--l~~s~~~l~~~~~~~~~~~~~~~~~~~~ 241 (479)
T PRK10077 167 FGQLVVYFVNYFIARSGDASWLNTDGWRY--MFASEAI-PALLFLMLLYF--VPETPRYLMSRGKQEQAEGILRKIMGNT 241 (479)
T ss_pred HHHHHHHHHHHHHhccCcccccccCChHH--HHHHHHH-HHHHHHHHHHc--CCCCcHHHHHcCCHHHHHHHHHHHcCCh
Confidence 9999988777665432110 01128999 5544433 22222222222 222111100 00 00 0000
Q ss_pred cccc---ccccccc----cCcchhhH---------HHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHh
Q psy8365 240 TEVA---RLSDVKH----FPVSFWMV---------VVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISA 303 (381)
Q Consensus 240 ~~~~---~~~~~~~----~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 303 (381)
+.+. +.++..+ ..+..+.. ....+......+....+.|.+. +..|.+............+..+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~-~~~g~~~~~~~~~~~~~~~~~~ 320 (479)
T PRK10077 242 LATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIF-KTLGASTDIALLQTIIVGVINL 320 (479)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHH-HHcCCCCchHHHHHHHHHHHHH
Confidence 0000 0001100 00111110 0111111222233344556654 4578887777777777788889
Q ss_pred hhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh--ccc---hhHHHHHHHHHHHHh-hhcchhhhhhhcccCCcccc
Q psy8365 304 FLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH--TMI---DPHITMVMMGIAYSM-VASGLWPLIALVIPEYQLGT 377 (381)
Q Consensus 304 i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~~g~ 377 (381)
++.++.+++.||+|||+.++.......+....+... ... .....+.+++.+++. ..+..+.+.+|.+|+++|++
T Consensus 321 i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 400 (479)
T PRK10077 321 TFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGK 400 (479)
T ss_pred HHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHH
Confidence 999999999999999988655444443333322211 111 112233344444443 34777899999999999999
Q ss_pred ccc
Q psy8365 378 AYG 380 (381)
Q Consensus 378 ~~g 380 (381)
+.|
T Consensus 401 ~~g 403 (479)
T PRK10077 401 ALA 403 (479)
T ss_pred HHH
Confidence 876
No 51
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.97 E-value=2.7e-29 Score=226.97 Aligned_cols=315 Identities=12% Similarity=0.064 Sum_probs=227.0
Q ss_pred HHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHH
Q psy8365 36 LLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQL 115 (381)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~ 115 (381)
+..+....+....+.....+..|.+.+++|.|+.++|++.+.+.+++.+++++.|+++|| +|||+.+..+.++.+++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr-~g~k~~~~~~~~~~~~~~~ 86 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKR-IGFNRSYYLASLIFAAGCA 86 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 444556666777888889999999999999999999999999999999999999999999 9999999999999988877
Q ss_pred HHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccc
Q psy8365 116 VFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLI 195 (381)
Q Consensus 116 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 195 (381)
.+.. ++|++.+++.|+++|++.+...+...+.+.+..++++|+++++.+....++|..+|+.+++.+.+...
T Consensus 87 ~~~~---~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~----- 158 (381)
T PRK03633 87 GLGL---MVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELM----- 158 (381)
T ss_pred HHHH---hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc-----
Confidence 6655 78999999999999999998888888888888999999999999999999999999999988766431
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhh
Q psy8365 196 GYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSL 275 (381)
Q Consensus 196 gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (381)
|+. .+..+... ..++.. .. .+.+++++ ++ ++..+.++.++ +|.++......+...........+
T Consensus 159 -~~~---~~~~~~~~--~~~~~~-~~-~~~~~~~~-----~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 222 (381)
T PRK03633 159 -SVL---PWVTGLVL--AAILPL-LF-TRILNQQA-----EN--HDSTSIWPMLK-LRQARLGVNGCIISGIVLGSLYGL 222 (381)
T ss_pred -chH---HHHHHHHH--HHHHHH-HH-hcccCCCC-----CC--CCCCCHHHHHH-hcchHHHHHHHHHHHHHHHHHHHH
Confidence 111 22211111 111111 11 11111110 11 11123344555 566665444444444444556677
Q ss_pred HHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Q psy8365 276 AQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMIDPHITMVMMGIAY 355 (381)
Q Consensus 276 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 355 (381)
.|.|+++ .|.++.+.+...+...++.+++++..|++.||+++|+.+........ ++..... ..........+++++.
T Consensus 223 lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~-~~~~~~~-~~~~~~~~~~l~g~~~ 299 (381)
T PRK03633 223 MPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVI-LGSIAML-SQAAMAPALFILGAAG 299 (381)
T ss_pred HHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHH-HHHHHHh-hhHHHHHHHHHHHHHH
Confidence 8988876 68999999998888899999999999999999999887544333332 2222222 1222333455566666
Q ss_pred HhhhcchhhhhhhcccCCccccc
Q psy8365 356 SMVASGLWPLIALVIPEYQLGTA 378 (381)
Q Consensus 356 ~~~~~~~~~~~~~~~p~~~~g~~ 378 (381)
....|...+...|..|+++++.+
T Consensus 300 ~~~~p~~~~~~~~~~~~~~~~~~ 322 (381)
T PRK03633 300 FTLYPVAMAWACEKVEHHELVAM 322 (381)
T ss_pred HhHHHHHHHHHHccCCHHHHHHH
Confidence 66678888888898888765543
No 52
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=4.2e-29 Score=223.69 Aligned_cols=307 Identities=13% Similarity=0.086 Sum_probs=223.2
Q ss_pred cCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHH
Q psy8365 51 DNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITI 130 (381)
Q Consensus 51 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 130 (381)
...++..|.+++++|.|+++.|++.+.+.+++.+++++.|+++|| +||||.+.++.++.+++.+.+ . .++++.++
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~-~---~~~~~~l~ 91 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARR-FGEERSVAAGLLLIAAGILIR-S---APGTALLF 91 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCchHHHHHHHHHHHHHHHHH-H---hccHHHHH
Confidence 567888999999999999999999999999999999999999999 999999999988887776654 3 68899999
Q ss_pred HHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHHHH
Q psy8365 131 LGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMT 210 (381)
Q Consensus 131 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~~ 210 (381)
+.|++.|++.+...+....++.|++| ++|++++++.+...++|..+++.+++.+.+..+. +||+ .+...++..
T Consensus 92 ~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~----~w~~--~f~~~~~~~ 164 (355)
T TIGR00896 92 AGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGG----HWQQ--ALAWWALPA 164 (355)
T ss_pred HHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh----hHHH--HHHHHHHHH
Confidence 99999999999888888888999986 6899999999999999999999998888765431 4888 443333221
Q ss_pred HHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhh
Q psy8365 211 CVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDA 290 (381)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 290 (381)
++... ...... ++ ++ +++++.++...++.++ +|.+|...+..++....++....|.|.|+++ .|.+..+
T Consensus 165 -~~~~~--~~~~~~-~~-~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~ 233 (355)
T TIGR00896 165 -LLALL--AWIPQV-RR-RV----AANQTTTRLTPVRIWR-SPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAAT 233 (355)
T ss_pred -HHHHH--HHhhhh-cc-cc----CCCCCCCCCCCchhhc-CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHH
Confidence 11111 111111 11 10 0111111223455666 6788877776666667777788899999876 6999999
Q ss_pred hhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhcc-chhHHHHHHHHHHHHhhhcchhhhhhhc
Q psy8365 291 ANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTM-IDPHITMVMMGIAYSMVASGLWPLIALV 369 (381)
Q Consensus 291 ~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 369 (381)
.+...+...++.+++++..|++.||+++|+.....+..+...+.....+.. ........++|++.+...+...+...+.
T Consensus 234 ~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~ 313 (355)
T TIGR00896 234 AGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWAWALVLGLGQGGAFPLALTLIGLR 313 (355)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhHhHHHHHHHHHh
Confidence 999999999999999999999999996544434444444434443333322 2223345667888877777766666554
Q ss_pred cc-CCccccccc
Q psy8365 370 IP-EYQLGTAYG 380 (381)
Q Consensus 370 ~p-~~~~g~~~g 380 (381)
.+ ++++++..|
T Consensus 314 ~~~~~~~g~~~~ 325 (355)
T TIGR00896 314 SRQAAQAAALSA 325 (355)
T ss_pred ccCHHHHHHHHH
Confidence 44 455565543
No 53
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=4.8e-29 Score=226.53 Aligned_cols=325 Identities=14% Similarity=0.110 Sum_probs=231.1
Q ss_pred HHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHH
Q psy8365 35 ALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQ 114 (381)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~ 114 (381)
.+.+.........+......+..|.+.+++|.|+.+.+++.+.+.+++.+++++.|+++|| +|||+.+..+.....++.
T Consensus 9 ~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~ 87 (394)
T PRK11652 9 LLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDR-VGRRPVILVGMSIFILGT 87 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHHHHHHHH
Confidence 3333444444555666677788899999999999999999999999999999999999999 999999999998888887
Q ss_pred HHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcccc
Q psy8365 115 LVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGL 194 (381)
Q Consensus 115 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~ 194 (381)
+.+.. +++++.+++.|++.|++.+...+....+..|.+++++|+++++..+.+..+|..++|.+++.+.+..
T Consensus 88 ~~~~~---~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~----- 159 (394)
T PRK11652 88 LVALF---AHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF----- 159 (394)
T ss_pred HHHHH---HccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----
Confidence 76655 6899999999999999988888888889999999999999999999999999999999998887654
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchh
Q psy8365 195 IGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVS 274 (381)
Q Consensus 195 ~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (381)
|||+ .++..++...+..++... ..++++++ ++++++.+..+++.++ +|+++...+..+........+..
T Consensus 160 -g~~~--~f~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 228 (394)
T PRK11652 160 -GWRA--CYLFLLLLGAGVTFSMAR---WMPETRPA----DARRTRVLASYRTLLS-NRRFNCYLLMLIGTLAGIAVFEA 228 (394)
T ss_pred -ChHH--HHHHHHHHHHHHHHHHHH---hCCccCcc----ccchhHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHHHHHH
Confidence 7998 555444333222222111 11111111 0111112334455666 67777665555555555555566
Q ss_pred hHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh----ccchhHHHHHH
Q psy8365 275 LAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH----TMIDPHITMVM 350 (381)
Q Consensus 275 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 350 (381)
+.+.++++.+|.++.+.+.......++..++..+.+++.||.+++.................... ..+.......+
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (394)
T PRK11652 229 CSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAAL 308 (394)
T ss_pred hChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 67778888889999999988888888888888889999999874333222222222222222211 11223344566
Q ss_pred HHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 351 MGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 351 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
.+++.+...+...+...|..|+ ++|++.+
T Consensus 309 ~~~g~~~~~~~~~~~~~~~~~~-~~g~~~~ 337 (394)
T PRK11652 309 FFFGAGMLFPLATSGAMEPFPY-LAGTAGA 337 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhccc-cchHHHH
Confidence 6777777788888888898874 5677654
No 54
>PRK11043 putative transporter; Provisional
Probab=99.97 E-value=7.8e-29 Score=225.66 Aligned_cols=318 Identities=14% Similarity=0.137 Sum_probs=226.9
Q ss_pred HHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHH
Q psy8365 39 MCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFA 118 (381)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~ 118 (381)
..+.....++....+.+..|.+++++|.++++.++..+++.++..++++++|+++|| +|||+.+..+..+..++.+++.
T Consensus 11 ~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~ 89 (401)
T PRK11043 11 LAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDR-YGRKPVLLAGLSLFALGSLGML 89 (401)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhh-cCCcHHHHHHHHHHHHHHHHHH
Confidence 333344455666777788899999999999999999999999999999999999999 9999999999888888877665
Q ss_pred hhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccch
Q psy8365 119 LGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQ 198 (381)
Q Consensus 119 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr 198 (381)
. +++++.+++.|+++|++.+...+...+++.|++|++++++..+.......+|..++|.+++.+.+.. |||
T Consensus 90 ~---~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~------g~~ 160 (401)
T PRK11043 90 W---VESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF------GWQ 160 (401)
T ss_pred H---hcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------ChH
Confidence 5 7899999999999999988888888899999999999999999999889999999999999887765 799
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHH
Q psy8365 199 TLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQE 278 (381)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (381)
+ .++..++...+..+ ... ...+++++ +++++++.++++.++ +|+++...+...+.......+..+.|.
T Consensus 161 ~--~~~~~~~~~~~~~~-~~~--~~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~ 228 (401)
T PRK11043 161 A--IFATLFAITLLLIL-PTL--RLKPSKKA------RKQSQDALTFKQLLK-SKTYLGNVLIFAACSAAFFAWLTGSPF 228 (401)
T ss_pred H--HHHHHHHHHHHHHH-HHH--HcCCCCCc------cccchHHHHHHHHHc-ChhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 8 55554443332222 111 11111111 111112234556666 677766555555555555666677888
Q ss_pred HHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHH--HHHHHHhh--ccc--hhHHHHHHHH
Q psy8365 279 LFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSI--VCHFMVGH--TMI--DPHITMVMMG 352 (381)
Q Consensus 279 ~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~--~~~~~~~~--~~~--~~~~~~~~~g 352 (381)
++++ .|+++.+.+.......++..+++...+++.||+++|+..........+ ..+..... ... .......+.+
T Consensus 229 ~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (401)
T PRK11043 229 ILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMA 307 (401)
T ss_pred HHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHH
Confidence 7755 799999999888777888889999999999999987754332222221 11111111 111 1222344556
Q ss_pred HHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 353 IAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
++.+...+...+...|..|+ ++|++.|
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~-~~g~~~g 334 (401)
T PRK11043 308 AANGAIYPIVVAQALRPFPQ-ATGKAAA 334 (401)
T ss_pred HHHHHHHHHHHHHHhhhCcc-cChHHHH
Confidence 66666777777777777764 5888765
No 55
>PRK12382 putative transporter; Provisional
Probab=99.97 E-value=5.7e-29 Score=225.90 Aligned_cols=312 Identities=16% Similarity=0.125 Sum_probs=211.2
Q ss_pred HHHHhhhhhhcCchhhHHH-HHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHh
Q psy8365 41 LLGFGSYFCYDNPSSLEEH-FTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFAL 119 (381)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~ 119 (381)
+..+..........+..|. +++|+|.|++++|++.+.+.+++.++++++|+++|| +||||.+..+.+...++.+.+..
T Consensus 22 ~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr-~g~r~~l~~~~~~~~~~~~~~~~ 100 (392)
T PRK12382 22 FAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQ-YGAKRSALQGMLACGLAGLAYLL 100 (392)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHh-hcchHHHHHHHHHHHHHHHHHHh
Confidence 3344455555666666674 678999999999999999999999999999999999 99999999988877666543322
Q ss_pred hh-----ccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcccc
Q psy8365 120 GA-----YVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGL 194 (381)
Q Consensus 120 ~~-----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~ 194 (381)
.. ..++++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+.+.+.|..++|++++.+.+..
T Consensus 101 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~----- 175 (392)
T PRK12382 101 AAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF----- 175 (392)
T ss_pred hhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc-----
Confidence 11 13588999999999999999888888899999999999999999999999999999999998887755
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchh
Q psy8365 195 IGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVS 274 (381)
Q Consensus 195 ~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (381)
|||+ .+... . +..++...... ..+++++ + + +++.+.++.. +.+|...+..++..........
T Consensus 176 -g~~~--~~~~~-~---~~~~~~~~~~~-~~~~~~~---~-~---~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~ 237 (392)
T PRK12382 176 -GFAA--LALTT-M---VLPLLAWAFNG-TVRKVPA---H-A---GERPSLWSVV---GLIWKPGLGLALQGVGFAVIGT 237 (392)
T ss_pred -ChHH--HHHHH-H---HHHHHHHHHHH-hccCCCC---C-c---ccCchHHHHH---HHHHHhHHHHHHHHHHHhHHHH
Confidence 6887 32211 1 11221111111 1111110 0 1 1111122222 2223222223333344445567
Q ss_pred hHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhcc--chhHHHHHHHH
Q psy8365 275 LAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTM--IDPHITMVMMG 352 (381)
Q Consensus 275 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g 352 (381)
+.+.|+++ .|.+ +.+.......++.+++++..|++.||+++|+...... .....+..+..... ........+.+
T Consensus 238 ~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~g 313 (392)
T PRK12382 238 FVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSL-LVETVGLLLLWLAPTAWVALAGAALTG 313 (392)
T ss_pred HHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHH-HHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 77887765 4554 3455566667777889999999999999888755433 33333333333322 22233455667
Q ss_pred HHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 353 IAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
++.+...+...+...|..|+++||++.|
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g 341 (392)
T PRK12382 314 AGCSLIFPALGVEVVKRVPSQVRGTALG 341 (392)
T ss_pred HHHHhHHHHHHHHHHHhcCHHHHHHHHH
Confidence 7777667777788889999999998876
No 56
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=1.9e-28 Score=222.44 Aligned_cols=266 Identities=15% Similarity=0.140 Sum_probs=199.7
Q ss_pred HHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhc
Q psy8365 43 GFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAY 122 (381)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~ 122 (381)
.+..........+..|.+.+++|.|+.+.++..+.+.++..+++++.|+++|| +|||+.+..+.+...++.+++..
T Consensus 12 ~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~~~i~~~~~~~--- 87 (392)
T PRK10473 12 VLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADR-SGRKPVAIPGAALFIIASLLCSL--- 87 (392)
T ss_pred HHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHH-hCChHHHHHHHHHHHHHHHHHHH---
Confidence 33344444455577899999999999999999999999999999999999999 99999999999888888776655
Q ss_pred cchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHH
Q psy8365 123 VDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGI 202 (381)
Q Consensus 123 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~ 202 (381)
+++++.+++.|+++|++.+...+...+++.|++|+++|+++.++.+....+|..++|.+++.+.+.. +||+ .
T Consensus 88 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~------g~~~--~ 159 (392)
T PRK10473 88 AETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF------PWQS--L 159 (392)
T ss_pred hCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc------ChHH--H
Confidence 6899999999999999999889999999999999999999999999999999999999988776544 6998 5
Q ss_pred HHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHH
Q psy8365 203 VLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVK 282 (381)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (381)
+++.+.+..+..++.... .+++++++ ++++++.....++.++ +++++...+...+.......+..+.|.++++
T Consensus 160 ~~~~~~~~~i~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (392)
T PRK10473 160 FYTMAAMGILVLLLSLFI--LKETRPAR----APAASSKPRENSESLL-NRFFLSRLVITTLSVTVILTFVNTSPVLLME 232 (392)
T ss_pred HHHHHHHHHHHHHHHHHH--cCCCCCcc----cCCccchHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 555544333333222221 11211111 1111111122234444 5666655554444444444555667778888
Q ss_pred hcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHH
Q psy8365 283 RFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISL 327 (381)
Q Consensus 283 ~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~ 327 (381)
.+|.++.+.+.......++.+++.+..+++.||++||+.......
T Consensus 233 ~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~ 277 (392)
T PRK10473 233 QMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQV 277 (392)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 889999999999999999999999999999999998887554443
No 57
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.97 E-value=8.6e-30 Score=233.05 Aligned_cols=322 Identities=16% Similarity=0.044 Sum_probs=226.4
Q ss_pred HHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhh-
Q psy8365 43 GFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGA- 121 (381)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~- 121 (381)
.+...+......+..|.+.++++.++.+.|++.+.+.++..+++++.|+++|| +|||+.+..+..+.+++.+......
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr-~g~~~~l~~~~~~~~~~~~~~~~~~~ 104 (417)
T PRK10489 26 RFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADR-YDRKKLILLARGTCGLGFIGLALNAF 104 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhh-cCCceEEEehHHHHHHHHHHHHHHHH
Confidence 34444455566777888999999999999999999999999999999999999 9999999988877776655443211
Q ss_pred -ccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhh
Q psy8365 122 -YVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTL 200 (381)
Q Consensus 122 -~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~ 200 (381)
..++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+...++|..+|+.+++.+.+.. +||+
T Consensus 105 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~------~~~~- 177 (417)
T PRK10489 105 LPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAG------GVAW- 177 (417)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHH------hhHH-
Confidence 25678999999999999988888889999999999999999999999999999999999999988765 6888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHH
Q psy8365 201 GIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELF 280 (381)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (381)
.++..++ ..++..+.... ..++++++ .++++..++....++..++ +|.++...+..++... ......+.|.|.
T Consensus 178 -~~~~~~~-~~~~~~~~~~~--l~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~p~~~ 250 (417)
T PRK10489 178 -NYGLAAA-GTFITLLPLLR--LPALPPPP-QPREHPLRSLLAGFRFLLA-SPVVGGIALLGGLLTM-ASAVRVLYPALA 250 (417)
T ss_pred -HHHHHHH-HHHHHHHHHHh--CCCCCCCC-cccccchHHHHHHHHHHHc-ChHHHHHHHHHHHHHH-HHhHHHhhHHHH
Confidence 3433332 32222222211 11111110 0000000111122344445 5666555444443332 345667889999
Q ss_pred HHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhccc--hhHHHHHHHHHHHHhh
Q psy8365 281 VKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMI--DPHITMVMMGIAYSMV 358 (381)
Q Consensus 281 ~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~ 358 (381)
++.+|.++.+.+.+.+...++.+++.++.+++.||.++++.+.. +......++.++...+. ...+...++|++.+..
T Consensus 251 ~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 329 (417)
T PRK10489 251 DEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLL-STLGSFLAVGLFGLMPMWILAVLCLALFGYLSAIS 329 (417)
T ss_pred HhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHH-HHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999998666555333 33333344444333222 2234445566666666
Q ss_pred hcchhhhhhhcccCCccccccc
Q psy8365 359 ASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 359 ~~~~~~~~~~~~p~~~~g~~~g 380 (381)
.+...++..|..|++.||+++|
T Consensus 330 ~~~~~~~~~~~~p~~~~g~~~g 351 (417)
T PRK10489 330 SLLQYTLLQTQTPDEMLGRING 351 (417)
T ss_pred HHHHHHHHHhhCCHHHHHHHHH
Confidence 6677889999999999999876
No 58
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.97 E-value=2e-28 Score=219.01 Aligned_cols=298 Identities=21% Similarity=0.303 Sum_probs=244.9
Q ss_pred HHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHH
Q psy8365 39 MCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFA 118 (381)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~ 118 (381)
+....+....+.....+..|.+.+++|.++.+.++..+...++..+++++.|+++|| +|||+.+..+.....++.+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~-~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDR-FGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCCchhhHHHHHHHHHHHHHHH
Confidence 344566777788888888999999999999999999999999999999999999999 9999999999999998888766
Q ss_pred hhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccch
Q psy8365 119 LGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQ 198 (381)
Q Consensus 119 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr 198 (381)
. .++++.+++.|++.|++.+...+...+++.|++|+|+|++.+++.+....+|..+++.+++.+.+.. +||
T Consensus 83 ~---~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~ 153 (352)
T cd06174 83 F---ASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL------GWR 153 (352)
T ss_pred H---hccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh------hHH
Confidence 6 6899999999999999999999999999999999999999999999999999999999999988765 588
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHH
Q psy8365 199 TLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQE 278 (381)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (381)
+ .++..+.... +..+...... |+++...+..++..........+.|.
T Consensus 154 ~--~~~~~~~~~~-~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (352)
T cd06174 154 W--LFLILAILGL-LLALLLLFLL------------------------------RLLLLLALAFFLLSFGYYGLLTYLPL 200 (352)
T ss_pred H--HHHHHHHHHH-HHHHHHHHHH------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 8 4444443322 2222221111 45677777788888888888899999
Q ss_pred HHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchH-HHHHHHHHHHHHHHHHHhhc--cchhHHHHHHHHHHH
Q psy8365 279 LFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNL-FWVFISLMVSIVCHFMVGHT--MIDPHITMVMMGIAY 355 (381)
Q Consensus 279 ~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~ 355 (381)
+.++..|.+..+.+.......++..++.++.+++.||++||+ .+.. +.....++....... .+...+...+.+++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~ 279 (352)
T cd06174 201 YLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLI-GLLLAALGLLLLALAPSLALLLVALLLLGFGL 279 (352)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 998877999999999999999999999999999999999888 6444 433333444443332 233445566778888
Q ss_pred HhhhcchhhhhhhcccCCccccccc
Q psy8365 356 SMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 356 ~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
+...+...++..|..|+++|++.+|
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (352)
T cd06174 280 GFAFPALLTLASELAPPEARGTASG 304 (352)
T ss_pred hccchhHHHHHHhhcCHHHHHHHHH
Confidence 8888999999999999999998765
No 59
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.97 E-value=5.4e-29 Score=225.29 Aligned_cols=318 Identities=10% Similarity=0.022 Sum_probs=216.1
Q ss_pred HHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHh
Q psy8365 40 CLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFAL 119 (381)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~ 119 (381)
+...+...++........+.+.+|++.++.+.+++.+.+.+++.++++++|+++|| +||||+++.+.++.+++.+.+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr-~grr~vl~~~~~~~~~~~~~~~~ 87 (393)
T PRK11195 9 MAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADS-FPKGRVMFIANGIKLLGCLLMLF 87 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhc-cCCchhhHHHHHHHHHHHHHHHH
Confidence 33444444443344455566788999999999999999999999999999999999 99999999999999888776554
Q ss_pred hhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchh
Q psy8365 120 GAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQT 199 (381)
Q Consensus 120 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~ 199 (381)
..+. ++.|+++|++.+...|...+++.|++|+|+|++++++.+....+|.++||.+++.+.++. |+.
T Consensus 88 ---~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-------~~~ 154 (393)
T PRK11195 88 ---GIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-------AEA 154 (393)
T ss_pred ---HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHH
Confidence 3443 788999999999999999999999999999999999999999999999999999998742 444
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCc----ccccccccccccCcchhhHHHHHHHhhhhhhcchhh
Q psy8365 200 LGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGE----TEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSL 275 (381)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (381)
.+.+.+. ..+++.+.. ...+++++++.+++++.. +....++.+++ +|.+........+...........
T Consensus 155 --~~~i~~~-~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~ 227 (393)
T PRK11195 155 --ALAVCAL-IYLLAALFN---LFIPRLGARRPGQSWNPIALLRDFFHACRVLWR-DKLGRFSLAGTTLFWGAGATLRFL 227 (393)
T ss_pred --HHHHHHH-HHHHHHHHH---hcCCCCcccccccCCCHHHHHHHHHHHHHHHHh-CchhHHHHHHHHHHHHHHHHHHHH
Confidence 3333322 222222211 122211111000000000 00112334455 565554444444444444455556
Q ss_pred HHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhcc--chhHHHHHHHHH
Q psy8365 276 AQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTM--IDPHITMVMMGI 353 (381)
Q Consensus 276 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~ 353 (381)
.+.|+++.+|.++.+.|.......++.+++++..+++.||.++|+.... +....... ....... +.......+.|+
T Consensus 228 ~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~-g~~~~~~~-~~~~~~~~~~~~~~~~~~~G~ 305 (393)
T PRK11195 228 VLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPA-GILMGLVV-LLMALQHSLLPAYPLLILIGA 305 (393)
T ss_pred HHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHH-HHHHHHHH-HHHHHHhHHHHHHHHHHHHHH
Confidence 6778888899999999999999999999999999999999887765433 33333222 2222211 112334446677
Q ss_pred HHHhhhcchhhhhhhcccCCc-cccccc
Q psy8365 354 AYSMVASGLWPLIALVIPEYQ-LGTAYG 380 (381)
Q Consensus 354 ~~~~~~~~~~~~~~~~~p~~~-~g~~~g 380 (381)
+.+...+...+..+|..|++. +|++.|
T Consensus 306 ~~g~~~~~~~~~~q~~~~~~~~~g~~~a 333 (393)
T PRK11195 306 LGGFFVVPMNALLQHRGHVLVGAGHSIA 333 (393)
T ss_pred hhhhhhhhHHHHHHhhCcccccchhHHH
Confidence 777767777888888766654 677654
No 60
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.97 E-value=2.3e-28 Score=228.44 Aligned_cols=347 Identities=12% Similarity=0.053 Sum_probs=224.6
Q ss_pred ccchhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhh-----cCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchh
Q psy8365 27 HHNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDM-----HLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRM 101 (381)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~ 101 (381)
+..++++..+.++.+..+..+++....+...|.+.+++ +.++.+.+++.+.+.++..++++++|+++|| +|||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~-~Grr~ 87 (502)
T TIGR00887 9 PFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADK-LGRKR 87 (502)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hccHH
Confidence 34456677777788888999999999998888887653 3566778999999999999999999999999 99999
Q ss_pred hhHHHHHHHHHHHHHHHhhhccch------hHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhh
Q psy8365 102 GSTIYSVLVVIGQLVFALGAYVDS------LFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGS 175 (381)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 175 (381)
.+.++.++..++.++... +++ ++.++++|+++|++.+...+....+++|++|+++|+++.++.+....+|.
T Consensus 88 ~~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~ 164 (502)
T TIGR00887 88 VYGMELIIMIIATVASGL---SPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGI 164 (502)
T ss_pred HHHHHHHHHHHHHHHHHH---ccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHH
Confidence 999999999888876665 333 78999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhHHHHhhhhc-----------------cccccchhhHHHHHHHHHHHHHHHHHHHhhccc-------chhhHHH
Q psy8365 176 TVNMFVAEPLYKYVEK-----------------FGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCM-------DKRAERI 231 (381)
Q Consensus 176 ~~g~~~~~~l~~~~~~-----------------~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 231 (381)
.+++.++..+...... ....+||+ .+ .++++..++.++....++.. .+++++.
T Consensus 165 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~--~~-~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a 241 (502)
T TIGR00887 165 LAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRI--LI-GFGAVPALLALYFRLTIPETPRYTADVAKDVEQA 241 (502)
T ss_pred HHHHHHHHHHHHHhccccccccccccccccccchhcccHHH--HH-HHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHH
Confidence 9999888776542211 00127998 44 33333333332222221110 0000000
Q ss_pred h---h-----h-cccCc----------cccccccccccc--Ccch----hhHHHHHHHhhhhhhcchhhHHHHHHHhcCC
Q psy8365 232 L---N-----R-RNAGE----------TEVARLSDVKHF--PVSF----WMVVVIIVSYYTSIFPFVSLAQELFVKRFNL 286 (381)
Q Consensus 232 ~---~-----~-~~~~~----------~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 286 (381)
. . + +++.+ +++.+++++++. +++. +......+.....+++...|.|.++++ .|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~ 320 (502)
T TIGR00887 242 ASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGY 320 (502)
T ss_pred HHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcC
Confidence 0 0 0 00000 011234444431 1121 212223334445566777788888864 677
Q ss_pred Chhhhhh------------hHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh-c--cchhHHHHHHH
Q psy8365 287 DSDAANR------------LNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH-T--MIDPHITMVMM 351 (381)
Q Consensus 287 ~~~~~~~------------~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~ 351 (381)
+...++. ......++.+++.++.++++||+|||+.++.......+...++... . ...........
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 400 (502)
T TIGR00887 321 SPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVL 400 (502)
T ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 6543221 1223344566678889999999999998665544444333322211 1 11111111211
Q ss_pred HHHH-H-hhhcchhhhhhhcccCCcccccccC
Q psy8365 352 GIAY-S-MVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 352 g~~~-~-~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
.... + ...+..+.+..|.+|++.|+++.|+
T Consensus 401 ~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~ 432 (502)
T TIGR00887 401 AQFFANFGPNATTFIVPGEVFPTRYRSTAHGI 432 (502)
T ss_pred HHHHHhcCCCchhhhhhhccCchhHHHHHHHH
Confidence 1112 1 2446678889999999999998763
No 61
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.97 E-value=5.5e-28 Score=218.31 Aligned_cols=315 Identities=11% Similarity=0.050 Sum_probs=215.1
Q ss_pred HHhhhhhhcCchhhHHH-HHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHH-HHHHHHHHHHHHHhh
Q psy8365 43 GFGSYFCYDNPSSLEEH-FTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTI-YSVLVVIGQLVFALG 120 (381)
Q Consensus 43 ~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~-~~~~~~~~~~~~~~~ 120 (381)
++...+......+..|. +++++|.|+.+.|++.+.+.+...+.+++.|+++|| +||||.++. +.....++.+++..
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~~- 83 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDY-QGDRKGLILFCCLLAALACLLFAW- 83 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHHHHHHHHHHHHHHHHh-
Confidence 44555555666676665 678999999999999999999999999999999999 999987665 44444455554544
Q ss_pred hccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHH--HHHHHHHHhHhhHhhhhhhHHHHhhhhccccccch
Q psy8365 121 AYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMV--FGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQ 198 (381)
Q Consensus 121 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr 198 (381)
+++++.+++.|+++|.+.+...|...++..|+.|+++|++. .+......++|.++++.+++.+.+.. |||
T Consensus 84 --~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~------~~~ 155 (375)
T TIGR00899 84 --NRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF------GFT 155 (375)
T ss_pred --cchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc------ccH
Confidence 78999999999999888788888888888999887777654 67888888999999999999888765 799
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHH
Q psy8365 199 TLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQE 278 (381)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (381)
+ .++..+....+..++.. . ..++++++ .++ ++++.+.++.++ +|+++......++..........+.|.
T Consensus 156 ~--~f~~~~~~~~~~~~~~~-~--~~~~~~~~-~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (375)
T TIGR00899 156 V--MFLTAALAFVLCGVLVW-L--FLPSYPRG-APG----ALTRLEVRGLLA-SRDTRLLFVACTLMWGCNILYIINMPL 224 (375)
T ss_pred H--HHHHHHHHHHHHHHHHH-H--hCCCcccC-ccc----ccCcchhhhhhc-CcchHHHHHHHHHHHHHHHHHHhhhHH
Confidence 8 55554443222222211 1 11211111 011 111122333444 566666555555555444555667888
Q ss_pred HHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh--ccchhHHHHHHHHHHHH
Q psy8365 279 LFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH--TMIDPHITMVMMGIAYS 356 (381)
Q Consensus 279 ~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~ 356 (381)
|+++.+|.++.+.+...........++.++.|++.||++||+....... ........... +.+.......+.+++.+
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 303 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAAL-AGVAFYTGLAADNSLWALLMLQLLNAIFIG 303 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888899999999988877777778888999999999999887554333 32233222222 12222333445566667
Q ss_pred hhhcchhhhhhhcccCCccccccc
Q psy8365 357 MVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 357 ~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
...+....+..|..|++ ++++.|
T Consensus 304 ~~~~~~~~~~~~~~~~~-~~~~~~ 326 (375)
T TIGR00899 304 ILAGIGMLYFQDLMPGR-AGAATT 326 (375)
T ss_pred HHHHHHHHHHHHhCcch-hhHHHH
Confidence 66677778888988765 556554
No 62
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.97 E-value=1.4e-28 Score=220.40 Aligned_cols=321 Identities=10% Similarity=0.046 Sum_probs=220.0
Q ss_pred cCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhc-----Cchhhh-HHHHHHHHHHHHHHHhhhccc
Q psy8365 51 DNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVF-----GIRMGS-TIYSVLVVIGQLVFALGAYVD 124 (381)
Q Consensus 51 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~-----G~r~~~-~~~~~~~~~~~~~~~~~~~~~ 124 (381)
...++..|.+.+|+|+|.+++|+..+. .+...+ .+++|+++|| + ||||.+ +.+.+..++......+..-..
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr-~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~ 81 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDT-VYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPST 81 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhc-ccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 345667899999999999999999765 555555 9999999999 8 899975 556666655544444321125
Q ss_pred hhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccc--cccchhhHH
Q psy8365 125 SLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFG--LIGYQTLGI 202 (381)
Q Consensus 125 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~--~~gWr~~~~ 202 (381)
+.+.+....++.+++.+...++..+++.|++|+|+|+++.++...+.++|.++++.+++.+.+..+.+. ..+||. .
T Consensus 82 ~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~--~ 159 (356)
T TIGR00901 82 DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGY--I 159 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHH--H
Confidence 666777778888888888889999999999999999999999999999999999999988887764210 114998 5
Q ss_pred HHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcc---hhhHHHHHHHhhhhhhcchhhHHHH
Q psy8365 203 VLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVS---FWMVVVIIVSYYTSIFPFVSLAQEL 279 (381)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (381)
+++.++ ..++.++.... ..++++++..++++++++.+..++++++ +|. ++...+..++.....+....+.|.|
T Consensus 160 f~i~ai-~~l~~~~~~~~--~~~e~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (356)
T TIGR00901 160 FFWTAL-LILPGLLVTLF--LAKEPQEDASVPKPLTQAVLKPIREFFQ-RKNMIQALLLLLLIVLYKLGDSAATVLTTLF 235 (356)
T ss_pred HHHHHH-HHHHHHHHHHH--hccCCCcccccchhHHHHHHHHHHHHHH-hcCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544443 33332222111 1111111100000001111223455555 444 6666666677777777888899999
Q ss_pred HHHhcCCChhhhhhhHHHHH-HHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh--cc----------chhHH
Q psy8365 280 FVKRFNLDSDAANRLNSIVY-TISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH--TM----------IDPHI 346 (381)
Q Consensus 280 ~~~~~g~~~~~~~~~~~~~~-~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~----------~~~~~ 346 (381)
+++ .|+++.+.+....... +..+++.+++|++.||+|+|+.+........+........ .. +....
T Consensus 236 l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (356)
T TIGR00901 236 LLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFL 314 (356)
T ss_pred HHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHH
Confidence 987 8999999988877655 5778899999999999998888655554443332222211 11 11223
Q ss_pred HHHHHHHHHHhhhcchhhhhhhcccCCcccccccC
Q psy8365 347 TMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 347 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
..++.+++.+...+...++.+|.+|+++||+.+|+
T Consensus 315 ~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 349 (356)
T TIGR00901 315 TITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMAL 349 (356)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHH
Confidence 34455777778888999999999999999998763
No 63
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.96 E-value=1.5e-27 Score=217.96 Aligned_cols=322 Identities=11% Similarity=0.087 Sum_probs=218.0
Q ss_pred HHHHHHHhhhhhhcCchhhHHHHHhhhcCChHH-----HHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHH
Q psy8365 38 LMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQ-----YMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVI 112 (381)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-----~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~ 112 (381)
.+++..+..........+..|.+.+++|.+..+ .|++.+.+.++..+++++.|+++|| +|||+.+..+.+..++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~ 96 (408)
T PRK09874 18 VAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADR-KGRKIMLLRSALGMGI 96 (408)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hCcHHHHHHHHHHHHH
Confidence 334455566667677788889999999988654 4889999999999999999999999 9999999999888888
Q ss_pred HHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcc
Q psy8365 113 GQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKF 192 (381)
Q Consensus 113 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 192 (381)
+.+++.. .++++.+++.|++.|++. ...+....++.|++|+++|++++++......+|..++|.+++.+.+..
T Consensus 97 ~~~~~~~---~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--- 169 (408)
T PRK09874 97 VMVLMGL---AQNIWQFLILRALLGLLG-GFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSY--- 169 (408)
T ss_pred HHHHHHH---HhhHHHHHHHHHHHHHhh-hhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 7766554 689999999999999984 456777888999999999999999999999999999999999887765
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhh-HHHHHHHhhhhhhc
Q psy8365 193 GLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWM-VVVIIVSYYTSIFP 271 (381)
Q Consensus 193 ~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 271 (381)
+||+ .++..++...+..+...... ++++++++ + +++.+.+ +..+..+ +++++. .....+........
T Consensus 170 ---~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~--~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 237 (408)
T PRK09874 170 ---GLRP--VFFITASVLFLCFLVTLFCI--RENFQPVS-K--KEMLHMR-EVVTSLK-NPKLVLSLFVTTLIIQVATGS 237 (408)
T ss_pred ---CHHH--HHHHHHHHHHHHHHHHHHHh--ccCccccc-c--hhhhHHH-HHHHhCc-CCchHHHHHHHHHHHHHHHHH
Confidence 6998 55554443322222221111 11111100 0 0000111 1122233 455443 23333333334444
Q ss_pred chhhHHHHHHHhcCCChh---hhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh--ccchhHH
Q psy8365 272 FVSLAQELFVKRFNLDSD---AANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH--TMIDPHI 346 (381)
Q Consensus 272 ~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 346 (381)
...+.+.|..+..+.... ..+.+.....++..++.+..|++.||++||+.+...... ...+...... +.+...+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 316 (408)
T PRK09874 238 IAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIF-SVLLLIPMSFVQTPLQLGI 316 (408)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHH-HHHHHHHHHHhccHHHHHH
Confidence 556677777765433221 234555566777888888999999999998875544333 3333333322 2222334
Q ss_pred HHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 347 TMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 347 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
..++.|++.+...+...+...+..|++++|+.+|
T Consensus 317 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 350 (408)
T PRK09874 317 LRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFS 350 (408)
T ss_pred HHHHHHhhhHhhHHHHHHHHHHhCCcccceeeeh
Confidence 4556777777777888888889999998998876
No 64
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=4e-27 Score=200.77 Aligned_cols=328 Identities=17% Similarity=0.156 Sum_probs=258.7
Q ss_pred HHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHH
Q psy8365 36 LLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQL 115 (381)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~ 115 (381)
+.++....+..++......++.|++++.++++..|.+++...++.++.+.+++.|++.+| +|+|+.++++..++++|+.
T Consensus 15 ~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk-~gyk~gi~lgL~l~avg~~ 93 (422)
T COG0738 15 FVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKK-LGYKAGIVLGLLLYAVGAA 93 (422)
T ss_pred HHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHH-hhhHHHHHHHHHHHHHHHH
Confidence 344455556677777888999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh------
Q psy8365 116 VFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV------ 189 (381)
Q Consensus 116 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------ 189 (381)
++.-.+...+|..++++-++.|.|.+...++.+.+++...|+++..+.+++.+..+++|.+++|++++.+..+.
T Consensus 94 lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~ 173 (422)
T COG0738 94 LFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMS 173 (422)
T ss_pred HHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccC
Confidence 88654456899999999999999999999999999999999988999999999999999999999999988731
Q ss_pred -----hcc--ccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHH
Q psy8365 190 -----EKF--GLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVII 262 (381)
Q Consensus 190 -----~~~--~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (381)
... ....||+ .+...+....++.+ .....+.|+.++. ++ ++.++++....++++ +|+++...+..
T Consensus 174 ~~~~~~~~~~~~~~v~~--pYl~~~~~lvll~v---~~~~~k~p~~~~~-~~-~~~~~~~~~~~~l~~-~~~~~~gvl~~ 245 (422)
T COG0738 174 AAQILAIKGADASSVQF--PYLILAGLLVLLAV---LILLSKLPDLQVA-AP-SLGASGSAGLSSLFQ-NKHLRLGVLAI 245 (422)
T ss_pred HHHHHHHHHHHHHhhhh--HHHHHHHHHHHHHH---HHHhccCCcCCcc-cc-cccccccchHHHHHh-ChHHHHHHHHH
Confidence 000 0113665 33333332222221 1111222221111 11 111111124567777 89999999999
Q ss_pred HHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhccc
Q psy8365 263 VSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMI 342 (381)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 342 (381)
+++-........|++.|+.+..|.+..++....+....+.++|+.++.++.+|+...|.+...+......+......+..
T Consensus 246 FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~ 325 (422)
T COG0738 246 FLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGV 325 (422)
T ss_pred HHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 99999999999999999999889999999999999999999999999999999998888666665555555555444455
Q ss_pred hhHHHHHHHHHHHHhhhcchhhhhhhcccC
Q psy8365 343 DPHITMVMMGIAYSMVASGLWPLIALVIPE 372 (381)
Q Consensus 343 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 372 (381)
.......+.|+..+.++|..++...+..|+
T Consensus 326 v~~~~l~~ig~F~simfPTIfslal~~l~~ 355 (422)
T COG0738 326 VALYALFLIGLFNSIMFPTIFSLALKNLGE 355 (422)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHhccCc
Confidence 566667788889999999999999999984
No 65
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.96 E-value=2.1e-27 Score=215.48 Aligned_cols=303 Identities=11% Similarity=0.126 Sum_probs=212.6
Q ss_pred hhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q psy8365 55 SLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRF 134 (381)
Q Consensus 55 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 134 (381)
...+++++++|.|+.++|++.+...+...+.+++.|+++|| +|||+.+..+.++.+++.+.+.. .++++.+++.|+
T Consensus 32 ~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr-~g~k~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~~~ 107 (400)
T PRK11646 32 LISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADR-FGAKPMIVTGMLMRAAGFATMAI---AHEPWLLWLSCI 107 (400)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHH-hCchHHHHHHHHHHHHHHHHHHH---hccHHHHHHHHH
Confidence 33346788999999999999999999999999999999999 99999999999999888887655 689999999999
Q ss_pred HHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHH
Q psy8365 135 IFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLS 214 (381)
Q Consensus 135 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~ 214 (381)
++|++.+...+...+++.|++|+|+|++++++.....++|..+||.+++.+. .. |||+ .+++.+....+..
T Consensus 108 l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~------g~~~--~f~~~~~~~~~~~ 178 (400)
T PRK11646 108 LSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QY------DFRL--VCATGAVLFVLAA 178 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh------hHHH--HHHHHHHHHHHHH
Confidence 9999988888999999999999999999999999999999999999999987 33 6998 5554444333322
Q ss_pred HHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhh
Q psy8365 215 LLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRL 294 (381)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 294 (381)
++.. . ..+++++ + +.+++.+.++++.++ +|+++...+..+...........+.|.|+++..+ ++.+.+..
T Consensus 179 i~~~-~--~~~~~~~---~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l 248 (400)
T PRK11646 179 AFNA-W--LLPAYKL---S--TVRTPVREGMTRVLR-DKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWM 248 (400)
T ss_pred HHHH-H--hCCcccc---c--ccchhhHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHH
Confidence 2221 1 1111111 0 111112234555666 6777665554444443333445678888877555 66778888
Q ss_pred HHHHHHHHhhhhhhHHHHHH-hhcchHHHHHHHHHHHHHHHHHHhhcc--chhHHHHHHHHHHHHhhhcchhhhhhhccc
Q psy8365 295 NSIVYTISAFLSPLMGLVVD-KTGRNLFWVFISLMVSIVCHFMVGHTM--IDPHITMVMMGIAYSMVASGLWPLIALVIP 371 (381)
Q Consensus 295 ~~~~~~~~~i~~~~~g~l~d-r~g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p 371 (381)
.+...+....+....++..| |++.++.+ ..+......+...+.... +.......+++++.+...|...++..|..|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p 327 (400)
T PRK11646 249 YAIEACLSLTLLYPIARWSEKRFRLEHRL-MAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLAD 327 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhHHH-HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCC
Confidence 77776666655555555555 45544443 333333333333333322 222233455677777777888899999999
Q ss_pred CCcccccccC
Q psy8365 372 EYQLGTAYGM 381 (381)
Q Consensus 372 ~~~~g~~~g~ 381 (381)
+++||+++|+
T Consensus 328 ~~~~g~~~g~ 337 (400)
T PRK11646 328 ARARGSYMGF 337 (400)
T ss_pred cccchhhhhH
Confidence 9999998763
No 66
>KOG2533|consensus
Probab=99.96 E-value=1.8e-28 Score=222.21 Aligned_cols=301 Identities=17% Similarity=0.192 Sum_probs=230.4
Q ss_pred HHHHHHHHHHHHHhhhhhhcCch-hhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHH
Q psy8365 32 RVLALLLMCLLGFGSYFCYDNPS-SLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLV 110 (381)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~ 110 (381)
.+.++..++..++..+.+....+ ..+..+.+|.+....+.+.+.++++++++++++++|.+.|| ++..+.+....+++
T Consensus 43 dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r-~~ls~~l~~~~~~w 121 (495)
T KOG2533|consen 43 DLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDR-FPLSKGLSVSGILW 121 (495)
T ss_pred HHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHh-CChHHHHHHHHHHH
Confidence 34455556666667777765444 33334668999999999999999999999999999999999 99888888877777
Q ss_pred HHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 111 VIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
.+-.++... ..|++.+++.|++.|+.++..+|....+++.|+.+++|++.++++.+..++|.++|.+++..+.+..+
T Consensus 122 ~~~~~~~~~---~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~ 198 (495)
T KOG2533|consen 122 GLFGFLTAA---VHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNG 198 (495)
T ss_pred HHHHHHHHH---HhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcC
Confidence 665544443 68999999999999999999999999999999999999999999999999999999999988776444
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHhhcccch------hhH-----HHhhhcccCc----ccccccccccccCcch
Q psy8365 191 KFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDK------RAE-----RILNRRNAGE----TEVARLSDVKHFPVSF 255 (381)
Q Consensus 191 ~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~~ 255 (381)
.....|||| .|.+.++++.+.+++..+.++-.+. +++ ++.++++.+. .+...+++.++ ++++
T Consensus 199 ~~~~~gW~~--~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~-dp~v 275 (495)
T KOG2533|consen 199 SGGLAGWRW--LFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALK-DPGV 275 (495)
T ss_pred CCCcCCcee--ehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHh-chhH
Confidence 433459999 7888887777777655443321111 111 1111111111 12233445555 7999
Q ss_pred hhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHh----hcchHHHHHHHHHHHH
Q psy8365 256 WMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDK----TGRNLFWVFISLMVSI 331 (381)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr----~g~r~~~~~~~~~~~~ 331 (381)
|...+..++.....+++.+|+|.|+.+..|++..++..+.....++++++.++.|.++|| ..+|........+...
T Consensus 276 w~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~ 355 (495)
T KOG2533|consen 276 WPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAI 355 (495)
T ss_pred HHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998677999999999999999999999999999999 4455554445555555
Q ss_pred HHHHHHhh
Q psy8365 332 VCHFMVGH 339 (381)
Q Consensus 332 ~~~~~~~~ 339 (381)
.+...+..
T Consensus 356 ~g~~~l~~ 363 (495)
T KOG2533|consen 356 IGAISLLA 363 (495)
T ss_pred HHHHHHHh
Confidence 55444443
No 67
>KOG2532|consensus
Probab=99.96 E-value=3.4e-28 Score=220.09 Aligned_cols=285 Identities=15% Similarity=0.244 Sum_probs=226.1
Q ss_pred HhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccc
Q psy8365 61 TTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGG 140 (381)
Q Consensus 61 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 140 (381)
..++++|++|.|++.+.++.|+.+++++.|++.|| +|.|+++..+.++.++++++..... ..+++.+++.|++||++.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k-~G~r~v~~~~~~~sa~~t~l~P~aa-~~~~~~~~~~R~lqGl~~ 142 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADK-FGARRVFFISGLISALLTLLTPLAA-SIGFYLLLVLRFLQGLGQ 142 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHH-cCchHHHHHHHHHHHHHHHHHHHHH-HhcchhhHHHHHHhHHHH
Confidence 45789999999999999999999999999999999 9999999999999999999887743 356668899999999999
Q ss_pred hhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHHh
Q psy8365 141 ESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLL 220 (381)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~ 220 (381)
|..+|+...+.++|.|++||++..++...+..+|.+++.++++.+.+.. .||++ .|++.+++..+..++...+
T Consensus 143 g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~-----~GW~s--ifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 143 GVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESS-----LGWPS--IFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred hHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccC-----CCCch--HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999872 18999 8888888776666555443
Q ss_pred hcccchhhHHH--------hhhcc----cCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCCh
Q psy8365 221 LGCMDKRAERI--------LNRRN----AGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDS 288 (381)
Q Consensus 221 ~~~~~~~~~~~--------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 288 (381)
.. .+|++++. .++.+ .+++.+.+++++++ ++.+|...+..++...+.+.+.+|.|.|+.+.+|++.
T Consensus 216 ~~-d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~t-s~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v 293 (466)
T KOG2532|consen 216 YS-DSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILT-SPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDV 293 (466)
T ss_pred hc-CCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCCh
Confidence 32 12221111 11111 11113567889998 8999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHhhhhhhHHHHHHhhcc--------hHHHHHHHHHHHHHHHHHHhhcc-chhHHHHHHHHHHHH
Q psy8365 289 DAANRLNSIVYTISAFLSPLMGLVVDKTGR--------NLFWVFISLMVSIVCHFMVGHTM-IDPHITMVMMGIAYS 356 (381)
Q Consensus 289 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~--------r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~ 356 (381)
.+.|++.++..+...+..++.|.++||+.+ ||..-..+.....++++.+.+.. ......++++.++.+
T Consensus 294 ~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~ 370 (466)
T KOG2532|consen 294 RETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIG 370 (466)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHH
Confidence 999999999999999999999999999865 22322344444444444444422 233344444444433
No 68
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.96 E-value=1.3e-27 Score=221.67 Aligned_cols=329 Identities=14% Similarity=0.136 Sum_probs=222.7
Q ss_pred HHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhc-----Cchhh-hHHHHHHH
Q psy8365 37 LLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVF-----GIRMG-STIYSVLV 110 (381)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~-----G~r~~-~~~~~~~~ 110 (381)
..++..++..+......+...|...++.|.|.+++|.+ +.....+ ++++++|+++|| + ||||. +..+.+..
T Consensus 15 ~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr-~~~~~~Grrr~~ll~~~i~~ 91 (491)
T PRK11010 15 AILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDR-YTPPFLGRRRGWLLATQLLL 91 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHc-ccccCCCCchHHHHHHHHHH
Confidence 34444555666666677788888899999999999997 4444444 589999999999 9 99986 55666666
Q ss_pred HHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 111 VIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
+++...+++....++++.+.+.+++.|++.+...+...++..|++|+|+|+++.++...+..+|.++++.++..+.+..
T Consensus 92 ~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~- 170 (491)
T PRK11010 92 LVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRY- 170 (491)
T ss_pred HHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 5665555443224578899999999999999999999999999999999999999999999999999999888887731
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhh
Q psy8365 191 KFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIF 270 (381)
Q Consensus 191 ~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (381)
.|||. .+++.++.. ++..+... ..++++++..++++.+++...+++++++ +++.|...+..++......
T Consensus 171 ----~GWr~--~f~i~a~l~-ll~~l~~~---~~~e~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~ll~~~l~~~~~~ 239 (491)
T PRK11010 171 ----LGWQG--MYWLMAALL-IPCIIATL---LAPEPTDTIPVPKTLEQAVVAPLRDFFG-RNNAWLILLLIVLYKLGDA 239 (491)
T ss_pred ----cCHHH--HHHHHHHHH-HHHHHHHH---hcCCCccccccccchhhhHHHHHHHHHc-CcCHHHHHHHHHHHHHHHH
Confidence 17999 666555432 22222222 1222211110000000111224556666 5666766665566555656
Q ss_pred cchhhHHHHHHHhcCCChhhhhhhHH-HHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHH--Hhhccchh---
Q psy8365 271 PFVSLAQELFVKRFNLDSDAANRLNS-IVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFM--VGHTMIDP--- 344 (381)
Q Consensus 271 ~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~~~~~--- 344 (381)
....+.++|+.+..|+++.+.+.... ...++.+++.+++|++.||+++|+.+...+....+..... ........
T Consensus 240 ~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l 319 (491)
T PRK11010 240 FAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSM 319 (491)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence 66678888888889999999999874 5567899999999999999998887555444333222221 12211111
Q ss_pred HHHHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 345 HITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 345 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
.....+..++.++..+..+++..+..+++.+++.+|
T Consensus 320 ~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~g 355 (491)
T PRK11010 320 GAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFA 355 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 122333344445445566788888888888877654
No 69
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.96 E-value=7.3e-28 Score=217.52 Aligned_cols=320 Identities=10% Similarity=0.036 Sum_probs=231.2
Q ss_pred HHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHH-HHHHHHHH
Q psy8365 39 MCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVL-VVIGQLVF 117 (381)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~-~~~~~~~~ 117 (381)
+.+.++..+.......|..|.+.+++|.|.+++|++.+.+.+...++++++|+++|| +|||+........ ..+..+.
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~l~~~~- 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKD-ANHIIIALRLLALASAIFAAA- 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHHHH-
Confidence 334455666666777888899999999999999999999999999999999999999 9985433221111 1111111
Q ss_pred HhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccc
Q psy8365 118 ALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGY 197 (381)
Q Consensus 118 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gW 197 (381)
....+++++.+++.|.++|.+.+...|...++..++ +++|++..|......++|.+++|++++.+.++. ||
T Consensus 87 -~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~------g~ 157 (382)
T TIGR00902 87 -FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF------DE 157 (382)
T ss_pred -HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc------Ch
Confidence 112368999999999999998888888888887665 478899999999999999999999999998876 79
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHH
Q psy8365 198 QTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQ 277 (381)
Q Consensus 198 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (381)
|. .+...... .++.++ ... ..+++++++ +++++++++..+.++++| +|++|...+..++.......+..+.|
T Consensus 158 ~~--~f~~~~~~-~~~~~~--~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~l~-~~~~~~~l~~~~l~~~~~~~~~~~~~ 229 (382)
T TIGR00902 158 QN--ILAILTAG-LAFMLI--GFL-IKPTIPPKD-AIPEDESQGDSAFIALLK-NPMNLRFLAAVCLIQGAHAAYYGFSA 229 (382)
T ss_pred hH--HHHHHHHH-HHHHHH--HHH-cCCCCCCCc-cccccccccchhHHHHHc-ChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98 44443322 111111 111 122111111 111111112223556667 78999988888888888888889999
Q ss_pred HHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh--ccchhHHHHHHHHHHH
Q psy8365 278 ELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH--TMIDPHITMVMMGIAY 355 (381)
Q Consensus 278 ~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~ 355 (381)
.|+++ .|.++.+.|...+...+..++.....+++.||+++|+.+. .+............. +.+.......+.++.+
T Consensus 230 ~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~ 307 (382)
T TIGR00902 230 IYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLL-ISAIACVGRWAIIGAIEAFPLIFLLQILHCGTF 307 (382)
T ss_pred HHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHH-HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHH
Confidence 99976 8999999999999888999999999999999999888754 444444455554443 2233455577888888
Q ss_pred HhhhcchhhhhhhcccCCccccccc
Q psy8365 356 SMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 356 ~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
+...+....++.+. |++++++++|
T Consensus 308 ~~~~~~~~~~i~~~-~~~~~~~~q~ 331 (382)
T TIGR00902 308 AVCHLAAMRYIAAQ-PGSEIAKLQA 331 (382)
T ss_pred HHHHHHHHHHHHhC-CHhhHHHHHH
Confidence 88888888899988 8888876654
No 70
>PRK10054 putative transporter; Provisional
Probab=99.96 E-value=8e-27 Score=211.27 Aligned_cols=316 Identities=9% Similarity=0.010 Sum_probs=221.1
Q ss_pred HHhhhhhhcCchhhH-HHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhh
Q psy8365 43 GFGSYFCYDNPSSLE-EHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGA 121 (381)
Q Consensus 43 ~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~ 121 (381)
.+..........+.. +++++++|+|+.++|++.+.+.++..+++++.|+++|| +|||+++.++.+...++.+++.+
T Consensus 16 ~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~k~~~~~~~~~~~~~~~~~~~-- 92 (395)
T PRK10054 16 SLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADK-FDKKRYMLLAITAFASGFIAIPL-- 92 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcchhHHHHHHHHHHHHHHHHH--
Confidence 344444444444444 46778899999999999999999999999999999999 99999999998888777765554
Q ss_pred ccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhH
Q psy8365 122 YVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLG 201 (381)
Q Consensus 122 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~ 201 (381)
+++++.+++.|.+.|.+.+...+...++..|.+|+++|++++++.....++|.+++|.+++.+.+ . +||.
T Consensus 93 -~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~------g~~~-- 162 (395)
T PRK10054 93 -VNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-Q------SINL-- 162 (395)
T ss_pred -HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h------ccCc--
Confidence 78899999999999888777788889999999999999999999999999999999999998764 2 6887
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHH
Q psy8365 202 IVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFV 281 (381)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (381)
.++..++ ..++.++.......+++++++ + ++ ++..+.++.++ +|+++...+..++..........+.+.|..
T Consensus 163 ~f~~~~~-~~~i~~i~~~~~~~~~~~~~~---~-~~--~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 234 (395)
T PRK10054 163 PFWLAAI-CSAFPLVFIQIWVQRSEKAIA---T-ET--GSVWSPSVLLQ-DKALLWFTCSGFLASFVSGAFASCISQYVM 234 (395)
T ss_pred HHHHHHH-HHHHHHHHHHHHHhccccccc---c-ch--hhhhhhhhhcc-CceehHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 5554443 333333222221111111111 0 11 11122345566 688887777777666665555566677665
Q ss_pred Hh--cCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhc-c--chhHHHHHHHHHHHH
Q psy8365 282 KR--FNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHT-M--IDPHITMVMMGIAYS 356 (381)
Q Consensus 282 ~~--~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~g~~~~ 356 (381)
+. .+.+....+.......+.........|++.||.++|+.+... ..+...+....... . +...+...+++++.+
T Consensus 235 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 313 (395)
T PRK10054 235 VVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAG-TLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEI 313 (395)
T ss_pred HhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHH-HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHH
Confidence 43 345555667777777777777778889999999888774433 33333333333321 1 123345566777777
Q ss_pred hhhcchhhhhhhcccCCccccccc
Q psy8365 357 MVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 357 ~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
...|...+.+.+..|++.++++.|
T Consensus 314 ~~~p~~~~~~~~~~p~~~~~~~~~ 337 (395)
T PRK10054 314 IYAPGEYMLIDHIAPPGMKASYFS 337 (395)
T ss_pred HHHhhHHHHHHHhCCcccceehHh
Confidence 777888889999999999988754
No 71
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.96 E-value=5.7e-26 Score=205.95 Aligned_cols=312 Identities=12% Similarity=0.056 Sum_probs=192.4
Q ss_pred HhhhhhhcCchhhHH-HHHhhhcCChHHHHHHHHHhhh-hhhHHhhhhhhhhhhhcCchhhhH-HHHHHHHHHHHHHHhh
Q psy8365 44 FGSYFCYDNPSSLEE-HFTTDMHLTNAQYMNLYSWYSW-PNVICCFIGGFLIDRVFGIRMGST-IYSVLVVIGQLVFALG 120 (381)
Q Consensus 44 ~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~~G~r~~~~-~~~~~~~~~~~~~~~~ 120 (381)
+...+......+..| .+++++|.|++++|++.+...+ ++.++.+++|+ .|| +||||.++ .+.+..+++..+...
T Consensus 25 ~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr-~g~r~~~~~~~~~~~~~~~~~~~~- 101 (393)
T PRK15011 25 FLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDK-RGDRKSLIVFCCLLGVLACTLFAW- 101 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-ccchhHHHHHHHHHHHHHHHHHHH-
Confidence 333344333444444 4688999999999999876555 55555555555 999 99998754 444444455444433
Q ss_pred hccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcc--hHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccch
Q psy8365 121 AYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKEL--NMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQ 198 (381)
Q Consensus 121 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr 198 (381)
+++++.+++.+.+.|...+...+...++..|+.++++| +...++.+.+.++|.+++|++++.+.++. |||
T Consensus 102 --~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~------gw~ 173 (393)
T PRK15011 102 --NRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGF------SFT 173 (393)
T ss_pred --hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhc------ChH
Confidence 78888876665555444467778888888888876655 34568888999999999999999998876 799
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHH
Q psy8365 199 TLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQE 278 (381)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (381)
. .++..++...+..+..... .+++++++ ++ ++ + +.+..++.++..+...............+..+.|.
T Consensus 174 ~--~f~~~~~~~~~~~~~~~~~--~~~~~~~~--~~-~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 241 (393)
T PRK15011 174 V--MYLSAAVAFIVCGVMVWLF--LPSMRKEL--PL-AT--G---TLEAPRRNRRDTLLLFVICTLMWGTNSLYIINMPL 241 (393)
T ss_pred H--HHHHHHHHHHHHHHHHHhh--cCccCCCC--cc-cc--c---cccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8 5555544333332221111 11111111 00 00 0 11112221233344434444444455555678899
Q ss_pred HHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhcc--chhHHHHHHHHHHHH
Q psy8365 279 LFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTM--IDPHITMVMMGIAYS 356 (381)
Q Consensus 279 ~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~ 356 (381)
|+++.+|+++.+.+.+.+...+..+++.++.|++.||++||+.... +............... +.......+.+++.+
T Consensus 242 ~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g 320 (393)
T PRK15011 242 FIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRV-AAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIG 320 (393)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHH-HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 9988899999999988887778888899999999999999886443 3333222222222211 112222333444555
Q ss_pred hhhcchhhhhhhcccCCccccccc
Q psy8365 357 MVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 357 ~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
...+....+..|..|++ +|++.|
T Consensus 321 ~~~~~~~~~~~~~~p~~-~g~~~~ 343 (393)
T PRK15011 321 ILGGIGMLYFQDLMPGQ-AGSATT 343 (393)
T ss_pred HHHHHHHHHHHHhCCCC-cchHHH
Confidence 54455567778888865 777654
No 72
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.96 E-value=3.4e-27 Score=241.99 Aligned_cols=325 Identities=13% Similarity=0.117 Sum_probs=227.6
Q ss_pred hhcCchhhHHHHHhhhcCCh--HHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchh
Q psy8365 49 CYDNPSSLEEHFTTDMHLTN--AQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSL 126 (381)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (381)
+......+.+.+.++++.+. ...+++.+++.+++.++++++|+++|| +|||++++++.++.+++.++..+....+++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr-~grk~~l~~~~~~~~~~~~~~~~~~~~~~~ 103 (1146)
T PRK08633 25 DLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADK-FSKNRVIRIVKLFEVGLTLLIVLAYYLGWF 103 (1146)
T ss_pred HHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHccH
Confidence 33344455566666776654 447999999999999999999999999 999999999887776666655554446789
Q ss_pred HHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh---ccccccchhhHHH
Q psy8365 127 FITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE---KFGLIGYQTLGIV 203 (381)
Q Consensus 127 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~---~~~~~gWr~~~~~ 203 (381)
+.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+.++|.++|+.+++.+.+... .....+|++ .+
T Consensus 104 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~--~~ 181 (1146)
T PRK08633 104 WLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIA--PA 181 (1146)
T ss_pred HHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchH--HH
Confidence 9999999999999999999999999999999999999999999999999999999999887521 000013444 22
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhHHHhhh-cccC---cccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHH
Q psy8365 204 LLLAGMTCVLSLLCSLLLGCMDKRAERILNR-RNAG---ETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQEL 279 (381)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (381)
.+..+...++.++.... ..+.++.+.... ++.. ++....++.+++ +|.++...+..++..........++|.|
T Consensus 182 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (1146)
T PRK08633 182 GLVLLAVAVLGLIFAYR--LPKVPAAAPEVFDKKKYLFPKLLWRNLKLLRS-DRVLWLAIIGLSYFWFISQLAQANFPAY 258 (1146)
T ss_pred HHHHHHHHHHHHHHHhc--CcCCCCCCcccccccccccHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 22222222222221111 111111110000 0000 001123444555 6777777776666666666777888999
Q ss_pred HHHhcCCChh-hhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh--ccchhHHHHHHHHHHHH
Q psy8365 280 FVKRFNLDSD-AANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH--TMIDPHITMVMMGIAYS 356 (381)
Q Consensus 280 ~~~~~g~~~~-~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~ 356 (381)
+.+.+|.+.. ..+++.+...++.+++.++.+++.||+++++.+.+...... ++.+++.. +.+...+..+++|++.+
T Consensus 259 ~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~ 337 (1146)
T PRK08633 259 AKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLA-LSLFLLPTAPSLASVLVLFFLFGFSAG 337 (1146)
T ss_pred HHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHH-HHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 9999999998 89999999999999999999999999988776544443333 33333332 22233445566777777
Q ss_pred hhhcchhhhhhhcccCCccccccc
Q psy8365 357 MVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 357 ~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
+..+...+++.+..|++.||+++|
T Consensus 338 ~~~~~~~~~~~~~~p~~~rg~~~~ 361 (1146)
T PRK08633 338 LFIVPLNALIQFRAPEKELGKVLA 361 (1146)
T ss_pred HhhHHHHHHHhhcCCccchhhhhH
Confidence 777778899999999999999876
No 73
>TIGR00898 2A0119 cation transport protein.
Probab=99.96 E-value=2.8e-27 Score=221.91 Aligned_cols=306 Identities=13% Similarity=0.098 Sum_probs=204.1
Q ss_pred hhHHHHHhhhcCC---hHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHH
Q psy8365 55 SLEEHFTTDMHLT---NAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITIL 131 (381)
Q Consensus 55 ~~~~~~~~~~~~s---~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 131 (381)
+..|.+.+|+|++ +.+.++..+++.++..+++++.|+++|| +|||+++.++.++..++.++..+ +++++.+++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr-~Grr~~~~~~~~~~~i~~~~~~~---~~~~~~~~~ 185 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDR-FGRKKVLLLSTLVTAVSGVLTAF---SPNYTVFLV 185 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhh-ccchHHHHHHHHHHHHHHHHHHH---cccHHHHHH
Confidence 5567899999999 9999999999999999999999999999 99999999999988888876665 799999999
Q ss_pred HHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHH
Q psy8365 132 GRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTC 211 (381)
Q Consensus 132 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~~~ 211 (381)
.|++.|++.+...+....++.|++|+++|+++.++...+..+|.++++.++..+. +||+ .+++.++...
T Consensus 186 ~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~---------~wr~--~~~~~~i~~~ 254 (505)
T TIGR00898 186 FRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP---------DWRW--LQLAVSLPTF 254 (505)
T ss_pred HHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh---------HHHH--HHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999888775542 4898 5555444332
Q ss_pred HHHHHHHHhhcccch-------hhH--HHhh---h---------------cc--cCcccccccccccccCcchhhHHHHH
Q psy8365 212 VLSLLCSLLLGCMDK-------RAE--RILN---R---------------RN--AGETEVARLSDVKHFPVSFWMVVVII 262 (381)
Q Consensus 212 ~~~~~~~~~~~~~~~-------~~~--~~~~---~---------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (381)
+..+....+...++ .++ +..+ + ++ ++++++.+++++++ +|+++...+..
T Consensus 255 -~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~ 332 (505)
T TIGR00898 255 -LFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFR-TPNLRKTTLCL 332 (505)
T ss_pred -HHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhC-ChHHHHHHHHH
Confidence 22222222111000 000 0000 0 00 00011124455565 56666555544
Q ss_pred HHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhccc
Q psy8365 263 VSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMI 342 (381)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 342 (381)
....+..... .+...+..+..+.+.. .......+..+++.++.+++.||+|||+.+........+..+.+......
T Consensus 333 ~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~ 408 (505)
T TIGR00898 333 MMLWFTTAFS-YYGLVLDLGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVD 408 (505)
T ss_pred HHHHHHHHHH-HHHHhccccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4333332221 2222222333444433 22334456677788889999999999988655544444333333222222
Q ss_pred ---hhHHHHHHHHHHHHhhhcchhhhhhhcccCCcccccccC
Q psy8365 343 ---DPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 343 ---~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
.......+.+++.+...+..+.+.+|.+|++.|+++.|+
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~ 450 (505)
T TIGR00898 409 LYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGV 450 (505)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhH
Confidence 122223334445555667778999999999999998763
No 74
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.95 E-value=4.7e-27 Score=240.23 Aligned_cols=328 Identities=13% Similarity=0.043 Sum_probs=223.2
Q ss_pred HHHHhhhhhhcCchhhH-HHHHhhhcCCh-HHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHH
Q psy8365 41 LLGFGSYFCYDNPSSLE-EHFTTDMHLTN-AQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFA 118 (381)
Q Consensus 41 ~~~~~~~~~~~~~~~~~-~~~~~~~~~s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~ 118 (381)
+..+.+.+......... ..+.++.+.+. ...++..+++.+++.++++++|+++|| +|||+++........+......
T Consensus 22 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr-~~rk~~~~~~~~~~~~~~~~~~ 100 (1140)
T PRK06814 22 FGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADK-YDKAKLAKILKFAEIGIAALAI 100 (1140)
T ss_pred HhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhh-ccHHHHHHHHHHHHHHHHHHHH
Confidence 33444444443333222 23444444433 457888899999999999999999999 9999976432222211111111
Q ss_pred hhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccch
Q psy8365 119 LGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQ 198 (381)
Q Consensus 119 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr 198 (381)
.....++++.+++.|+++|++.+...|+..+++.+++|+++|++++|+.+++.++|.++||++++.+.... +|+
T Consensus 101 ~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~------~~~ 174 (1140)
T PRK06814 101 YGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISG------NFV 174 (1140)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcc------ccH
Confidence 11124899999999999999999999999999999999999999999999999999999999999998865 688
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccC--cccccccccccccCcchhhHHHHHHHhhhhhhcchhhH
Q psy8365 199 TLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAG--ETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLA 276 (381)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (381)
+ .+ +..++..+..++.... ..++++++...+.+.. ++....++.+++ +|.+|...+..++.++....+..++
T Consensus 175 ~--~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (1140)
T PRK06814 175 I--LV-ALLMGIAVLGWLASLF--IPKTGNAAPDLKIDRNIIRSTITLLKYAKA-DKRIWLAILGISWFWLVGAVVLSQL 248 (1140)
T ss_pred H--HH-HHHHHHHHHHHHHHhh--CCCCCCCCCCCeeccchHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHHHHh
Confidence 7 33 3333333333222211 1111111000000000 011123455666 7888888888888777777888899
Q ss_pred HHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHh------------------
Q psy8365 277 QELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVG------------------ 338 (381)
Q Consensus 277 ~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~------------------ 338 (381)
|.|+++.+|.++...+.+.+...++.+++.++.|++.||..+++......++..+..+.+..
T Consensus 249 p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 328 (1140)
T PRK06814 249 PLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVF 328 (1140)
T ss_pred HHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhh
Confidence 99999999999999999999999999999999999998876655433333333322221211
Q ss_pred ---hccchhHHHHHHHHHHHHhhhcchhhhhhhcccCCcccccccC
Q psy8365 339 ---HTMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 339 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
.+.+...+..+++|++.+...+...+++++..|++.+|+++|+
T Consensus 329 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~ 374 (1140)
T PRK06814 329 LSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAA 374 (1140)
T ss_pred hcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHH
Confidence 1122233445667777777777889999999999999998873
No 75
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.95 E-value=2e-27 Score=225.19 Aligned_cols=280 Identities=12% Similarity=0.150 Sum_probs=210.4
Q ss_pred HHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHH
Q psy8365 37 LLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLV 116 (381)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~ 116 (381)
...++..+.........+..++.++++|+++..+.|++.+.+.+++.++.++.|++.|| +||||.+.++.+++++++++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r-~~r~~~i~~g~ll~~lg~ll 114 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTK-LHRPIVIGIGCAIMGLGSFL 114 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcc-cCcceEEEecHHHHHHHHHH
Confidence 33344566666777888888999999999999999999999999999999999999999 99999999999999999998
Q ss_pred HHhhhc------------------------------------------------cchhHHHHHHHHHHhccchhhhhhhh
Q psy8365 117 FALGAY------------------------------------------------VDSLFITILGRFIFGIGGESLAVAQN 148 (381)
Q Consensus 117 ~~~~~~------------------------------------------------~~~~~~l~~~r~l~G~~~~~~~~~~~ 148 (381)
+++..+ ...+..++++|+++|+|.+..++...
T Consensus 115 ~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~ 194 (633)
T TIGR00805 115 LSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGI 194 (633)
T ss_pred HhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCc
Confidence 765310 00356788999999999999999999
Q ss_pred hhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcc----------ccccchhhH----HHHHHHHHHHHHH
Q psy8365 149 SYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKF----------GLIGYQTLG----IVLLLAGMTCVLS 214 (381)
Q Consensus 149 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~----------~~~gWr~~~----~~~~~~~~~~~~~ 214 (381)
+++.|++|+++|++++++.+....+|.++|+++++.+.+..... ...+|||.+ .|++.+++..+.+
T Consensus 195 ~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~ 274 (633)
T TIGR00805 195 SYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTS 274 (633)
T ss_pred hhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988654210 001233321 3444444333333
Q ss_pred HHHHHhhcccchhhHH--Hhh---hcc--c-Cccc-----------ccccccccccCcchhhHHHHHHHhhhhhhcchhh
Q psy8365 215 LLCSLLLGCMDKRAER--ILN---RRN--A-GETE-----------VARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSL 275 (381)
Q Consensus 215 ~~~~~~~~~~~~~~~~--~~~---~~~--~-~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (381)
++ ...++...+++++ +.+ +++ + +++. ....+++++ +|.++...+..++.....+++.+|
T Consensus 275 v~-l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~-n~~f~~~~l~~~~~~~~~~~~~~~ 352 (633)
T TIGR00805 275 IP-FFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLC-NPIYMLVILAQVIDSLAFNGYITF 352 (633)
T ss_pred HH-HHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 2222111111100 000 000 0 0000 012344556 799999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhhHHHHHH-HHhhhhhhHHHHHHhhcch
Q psy8365 276 AQELFVKRFNLDSDAANRLNSIVYT-ISAFLSPLMGLVVDKTGRN 319 (381)
Q Consensus 276 ~~~~~~~~~g~~~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~g~r 319 (381)
+|.|+++.+|+++.+++.+.....+ +.+++.+++|++.||++.+
T Consensus 353 lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 353 LPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 9999999999999999999887766 5688999999999999843
No 76
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.95 E-value=2e-26 Score=208.24 Aligned_cols=312 Identities=11% Similarity=0.090 Sum_probs=217.7
Q ss_pred HhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCch----hhhHHHHHHHHHHHHHHHh
Q psy8365 44 FGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIR----MGSTIYSVLVVIGQLVFAL 119 (381)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r----~~~~~~~~~~~~~~~~~~~ 119 (381)
+..+.......+.+|.+.+|+|.|..++|++.+.+.++..++++++|++.|| +||| +.+.+..... ....
T Consensus 14 ~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~---~~~~-- 87 (382)
T PRK11128 14 FGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKD-PSQLIPALRLLALLTLLF---AVAF-- 87 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhh-hcchHHHHHHHHHHHHHH---HHHH--
Confidence 3334455667788888889999999999999999999999999999999999 9984 3332222221 1111
Q ss_pred hhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchh
Q psy8365 120 GAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQT 199 (381)
Q Consensus 120 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~ 199 (381)
....++++.+++.|++.|++.+...+...++..++ +++|+++.+......++|.++||++++.+.++. |||.
T Consensus 88 ~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~------g~~~ 159 (382)
T PRK11128 88 WFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF------GEQA 159 (382)
T ss_pred HHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc------ChhH
Confidence 12258899999999999999888888888887777 356888888899999999999999999998877 6998
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHH
Q psy8365 200 LGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQEL 279 (381)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (381)
.++..++ ..++.++.. . ..+++ ++..++++++++...++++++| +|++|...+..++..........+.|.|
T Consensus 160 --~f~~~~~-~~~~~~~~~--~-~~~~~-~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 231 (382)
T PRK11128 160 --ILWILTA-GVASMLLGQ--L-LRPTI-MPQGESRQQESAGWPAWKALLK-EPTVWRFLLCVSLLQGSHAAYYGFSAIY 231 (382)
T ss_pred --HHHHHHH-HHHHHHHHH--H-ccCCC-CCccccccccccccchHHHHHc-ChhHHHHHHHHHHHHHHhHhHHHHHHHH
Confidence 5554443 222222211 1 11111 1111111111112345677777 7888888777777777767777888888
Q ss_pred HHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh--ccchhHHHHHHHHHHHHh
Q psy8365 280 FVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH--TMIDPHITMVMMGIAYSM 357 (381)
Q Consensus 280 ~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~ 357 (381)
+++ .|.++.+.|...+...+..++.....+++.||+++|+.+... .....+....... +.+...+..++.|++.+.
T Consensus 232 ~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 309 (382)
T PRK11128 232 WQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLS-AICGVVRWGLMGSTTALPWLIVIQILHCGTFTV 309 (382)
T ss_pred HHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH-HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 865 799999999999988888899999999999999988885443 3444344444333 223344456667777777
Q ss_pred hhcchhhhhhhcccCCccccccc
Q psy8365 358 VASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 358 ~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
..+....+..+. +++++++..+
T Consensus 310 ~~~~~~~~~~~~-~~~~~~~~~~ 331 (382)
T PRK11128 310 CHLAAMRYIAAR-PGSEVIRLQA 331 (382)
T ss_pred HHHHHHHHHHHC-CHhhhHHHHH
Confidence 777777777776 4444565543
No 77
>KOG0569|consensus
Probab=99.95 E-value=2e-25 Score=199.78 Aligned_cols=334 Identities=15% Similarity=0.163 Sum_probs=229.0
Q ss_pred HHHHHHHhhhhhhcCchhhHHHHHh--------hhc--CChHH----HHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhh
Q psy8365 38 LMCLLGFGSYFCYDNPSSLEEHFTT--------DMH--LTNAQ----YMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGS 103 (381)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~--~s~~~----~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~ 103 (381)
...++.+-.++.....++..+.+.+ .+| .++++ .+.+.+++.+|.++|++..|.++|| +|||..+
T Consensus 15 ~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~-~GRK~~l 93 (485)
T KOG0569|consen 15 VATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADR-FGRKNAL 93 (485)
T ss_pred HHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcchHHH
Confidence 3333445555566666665554443 344 44443 4677889999999999999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhH
Q psy8365 104 TIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAE 183 (381)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 183 (381)
.+..++..++.++...+...+++.+++++|++.|+..+......+.++.|..|++.||....+.+.+..+|.+++..++.
T Consensus 94 ~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l 173 (485)
T KOG0569|consen 94 LLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGL 173 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999998888887778999999999999999999999999999999999999999999999999999999876654
Q ss_pred HHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhccc--------chhhHH--Hh--------------------h
Q psy8365 184 PLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCM--------DKRAER--IL--------------------N 233 (381)
Q Consensus 184 ~l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~--~~--------------------~ 233 (381)
.- ..|... .|++ .+....+.+++.++...+++.- +++++. .. +
T Consensus 174 ~~--ilGt~~--~W~~---l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~ 246 (485)
T KOG0569|consen 174 PS--LLGTED--LWPY---LLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIE 246 (485)
T ss_pred HH--hcCCCc--chHH---HHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHH
Confidence 32 223332 6887 3333332333333333222110 011000 00 0
Q ss_pred hcccCccccccccccccc---Ccchh-hHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhH
Q psy8365 234 RRNAGETEVARLSDVKHF---PVSFW-MVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLM 309 (381)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~ 309 (381)
+++.++++..+++++++. ++..+ .+.+....+..+.+....|...++++ .|++..++.+.....++...+.++++
T Consensus 247 ~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~-aG~~~~~a~~an~~~g~v~~~~t~~~ 325 (485)
T KOG0569|consen 247 EEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT-AGFTPEEAQYANLGIGIVNLLSTLVS 325 (485)
T ss_pred HhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 000111133456666662 12222 22333344556667777777776665 69999999999999999999999999
Q ss_pred HHHHHhhcchHHHHHHHHHHHHHHHHHHhh------c-cchh---HHHHHHHHHHHHh-hhcchhhhhhhcccCCccccc
Q psy8365 310 GLVVDKTGRNLFWVFISLMVSIVCHFMVGH------T-MIDP---HITMVMMGIAYSM-VASGLWPLIALVIPEYQLGTA 378 (381)
Q Consensus 310 g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~------~-~~~~---~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~~g~~ 378 (381)
.++.||+|||+.++.....+.+..+++... . .+.. ....+++.++++. .+|+.+-+.+|++|++.|.++
T Consensus 326 ~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa 405 (485)
T KOG0569|consen 326 PFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAA 405 (485)
T ss_pred HHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHH
Confidence 999999999999777666555544444332 1 1222 2334444555554 578999999999999999887
Q ss_pred cc
Q psy8365 379 YG 380 (381)
Q Consensus 379 ~g 380 (381)
.+
T Consensus 406 ~s 407 (485)
T KOG0569|consen 406 QS 407 (485)
T ss_pred HH
Confidence 64
No 78
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.95 E-value=2.4e-25 Score=196.52 Aligned_cols=320 Identities=11% Similarity=0.085 Sum_probs=225.4
Q ss_pred hhcCchhhHHHHHhhhcCChHH-HHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhH
Q psy8365 49 CYDNPSSLEEHFTTDMHLTNAQ-YMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLF 127 (381)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~s~~~-~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (381)
.+...+...|.+.+|+|+|++| .|.+.+++..+|++++++.|+++|| +|.|+++.++.+.+.+..++..+ ++++.
T Consensus 41 ~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDr-lG~K~vL~l~~l~Wsl~t~L~~f---a~Sl~ 116 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDY-LRYKPVLVLQALSFVCVWLLLLL---GTSVW 116 (511)
T ss_pred hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHH---HHHHH
Confidence 4677888889999999999999 9999999999999999999999999 99999999999999888887766 78999
Q ss_pred HHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHH
Q psy8365 128 ITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLA 207 (381)
Q Consensus 128 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~ 207 (381)
.+.+.|++.|++.|... +...++.+|+|+++|+++.++...+..+|.++++++++. ...+ |||+......+.
T Consensus 117 ~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~------gWr~y~~Ln~Is 188 (511)
T TIGR00806 117 HMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTL------GWISYSTLNIIS 188 (511)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhc------CchhHHHHHHHH
Confidence 99999999999999999 999999999999999999999999999999999999988 3333 799866556666
Q ss_pred HHHHHHHHHHHHhhcccchhh--HHHh-------hh-cc--cCcc-ccc----------------ccccccccCcchhhH
Q psy8365 208 GMTCVLSLLCSLLLGCMDKRA--ERIL-------NR-RN--AGET-EVA----------------RLSDVKHFPVSFWMV 258 (381)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~--~~~~-------~~-~~--~~~~-~~~----------------~~~~~~~~~~~~~~~ 258 (381)
.....++++..++++..++.. ++.. .+ ++ +++. +.. .+++..+ |+.+..-
T Consensus 189 l~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~-n~~vl~W 267 (511)
T TIGR00806 189 LVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYR-NPQLLLW 267 (511)
T ss_pred HHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhc-Ccchhhh
Confidence 666666666666554222210 0000 00 00 0000 000 0011112 5665555
Q ss_pred HHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHH-HHHHHHHHHHHHH
Q psy8365 259 VVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVF-ISLMVSIVCHFMV 337 (381)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~-~~~~~~~~~~~~~ 337 (381)
.+-..+...+++-+.+|......+..+-++...|..-++..+.+.+..+..|++-.++.+--.+.+ ....+-...++++
T Consensus 268 SlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m 347 (511)
T TIGR00806 268 SLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWM 347 (511)
T ss_pred hHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhh
Confidence 565666666777777776666655434223356777777788888888888888555533222222 2222222223333
Q ss_pred hh--ccchhHHHHHHHHHHHHhhhcchhhhhhhcccCCcccccccC
Q psy8365 338 GH--TMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 338 ~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
.. +.+..++..++++..+.+..++...-+++....+.-|-..|+
T Consensus 348 ~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGi 393 (511)
T TIGR00806 348 SQSHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGI 393 (511)
T ss_pred hcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEec
Confidence 33 345566777788888888888777777777777766666553
No 79
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.95 E-value=1.6e-25 Score=203.82 Aligned_cols=322 Identities=16% Similarity=0.093 Sum_probs=215.8
Q ss_pred HHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhc-----Cchh-hhHHHHHHHHHH
Q psy8365 40 CLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVF-----GIRM-GSTIYSVLVVIG 113 (381)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~-----G~r~-~~~~~~~~~~~~ 113 (381)
...++.++.........+|.+.++.|.|.+++|++..+... .+.++++|+++|| + |||| .+..+.+..+++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr-~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDR-YTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHc-ccccCCCcchhHHHHHHHHHHHH
Confidence 44566677777777788898888999999999999777665 5889999999999 9 8876 577777777666
Q ss_pred HHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccc
Q psy8365 114 QLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFG 193 (381)
Q Consensus 114 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 193 (381)
...+.+....++++.+.+..++.++..+...++..+++.|++|+|+|+++.++...+.++|.++++.++..+.+...
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~--- 158 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVL--- 158 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhccc---
Confidence 66555532235678888888888888888889999999999999999999999999999999999998888876431
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcch
Q psy8365 194 LIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFV 273 (381)
Q Consensus 194 ~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (381)
|||. .+++.++...+ ..+.. . ..++++++..++++.+++...+++++++ +|.++...+..++.........
T Consensus 159 --gw~~--~f~i~a~~~l~-~~l~~--~-~~~e~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~l~~~~l~~~~~~~~~ 229 (402)
T PRK11902 159 --GWGN--TYLLMAGLMLA-GALTT--L-WAPEPEVPARPPRSLGEAVVGPLRDFFS-RRGAWALLLLIVLYKLGDAFAG 229 (402)
T ss_pred --CHHH--HHHHHHHHHHH-HHHHH--H-hcCCCcccccccchhHHHHHHHHHHHHh-CcCHHHHHHHHHHHHhHHHHHH
Confidence 7998 56555553322 22211 1 2222211110111101112234566777 7888877666666554443334
Q ss_pred hhHHHHHHHhcCCChhhhhhhHHHHH-HHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHH--Hhhccchh---HHH
Q psy8365 274 SLAQELFVKRFNLDSDAANRLNSIVY-TISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFM--VGHTMIDP---HIT 347 (381)
Q Consensus 274 ~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~ 347 (381)
.+.++++.+.+|+++.+.+....... ++.+++.++.+++.||+++|+.+........+....+ ........ ...
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 309 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALA 309 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 45566777878999999998876654 4678899999999999998887554444333322222 12211111 112
Q ss_pred HH----HHHHHHHhhhcchhhhhhhcccCCccc
Q psy8365 348 MV----MMGIAYSMVASGLWPLIALVIPEYQLG 376 (381)
Q Consensus 348 ~~----~~g~~~~~~~~~~~~~~~~~~p~~~~g 376 (381)
.. ..+++.+...+....++++..|.+.++
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 342 (402)
T PRK11902 310 IGIENLCGGMGTAAFVALLMALCNRSFSATQYA 342 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH
Confidence 21 233444445666677777877766554
No 80
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.95 E-value=1.2e-24 Score=182.97 Aligned_cols=317 Identities=17% Similarity=0.149 Sum_probs=246.9
Q ss_pred HHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHH
Q psy8365 33 VLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVI 112 (381)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~ 112 (381)
+..+..+.+..+-.=-..+..+|+++.+++|+|+|.++.|+++++..+...+.+++..++.+| +|.++.+..++++.++
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~-~g~er~l~~~Llli~~ 89 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARR-FGEERSLFLALLLIAA 89 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhhHHHHHHHHHHHHH
Confidence 333333333333333344678899999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcc
Q psy8365 113 GQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKF 192 (381)
Q Consensus 113 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 192 (381)
|.++-.. .+...++.+-.+.|.|.+...+..+.++-+.|| |+-+..+|+|.+...+|..+++.+...+.++.+
T Consensus 90 G~~iR~~----~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~-- 162 (395)
T COG2807 90 GILIRSL----GGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSG-- 162 (395)
T ss_pred HHHHHhc----ccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhc--
Confidence 9886654 478889999999999999999999999999998 778999999999999999999999999988773
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcc
Q psy8365 193 GLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPF 272 (381)
Q Consensus 193 ~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (381)
|||....+| +. .+++..+.+.....+++ ....+.+..+...++| +|.-|.+.+.+.++...+|..
T Consensus 163 ---gW~~aL~~W--Al----~allAl~~WlPq~~r~~-----~~~~~~~~~~~~~vw~-~~~aW~vtLfmGlqS~~~Y~~ 227 (395)
T COG2807 163 ---GWRGALGFW--AL----LALLALLIWLPQALREQ-----AASIATKLVSVRKVWR-SPLAWQVTLFMGLQSLLYYIV 227 (395)
T ss_pred ---cHHHHHHHH--HH----HHHHHHHHHhhhccccc-----cccccccccccccccc-CchhHHHHHHHHhhHHHHHHH
Confidence 799843332 22 33333333322211110 1111122223345677 799999999999999999999
Q ss_pred hhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh-ccchhHHHHHHH
Q psy8365 273 VSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH-TMIDPHITMVMM 351 (381)
Q Consensus 273 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 351 (381)
..|+|.++.| .|+|..++|.+.+...+..+..++....+.+|..+++........+..++++-+.+ +...++...+++
T Consensus 228 ~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw~~ll 306 (395)
T COG2807 228 IGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILWALLL 306 (395)
T ss_pred HHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 9999999887 69999999999999999999999999999999876666566555555555554434 344455556888
Q ss_pred HHHHHhhhcchhhhhhhcccCC
Q psy8365 352 GIAYSMVASGLWPLIALVIPEY 373 (381)
Q Consensus 352 g~~~~~~~~~~~~~~~~~~p~~ 373 (381)
|++.+..++.....+.+..++.
T Consensus 307 G~G~G~~F~laL~li~~rs~~a 328 (395)
T COG2807 307 GLGQGGAFPLALTLILLRSSDA 328 (395)
T ss_pred hCccchHHHHHHHHHHhhcCCh
Confidence 9999988888888877776653
No 81
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.94 E-value=5.1e-25 Score=202.91 Aligned_cols=329 Identities=13% Similarity=0.124 Sum_probs=236.6
Q ss_pred HHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHH
Q psy8365 38 LMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVF 117 (381)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~ 117 (381)
.++.+...+.++..+.....+.+..+..-|+..++++..+..+...+.++++|.++|| ++|||+++.+.++.++..+.+
T Consensus 14 ~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr-~drrrili~~~~~~~~~~~~L 92 (524)
T PF05977_consen 14 RLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADR-FDRRRILILSQLLRALVALLL 92 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccchHHHHHHHHHHHHHHHHH
Confidence 3445555555666666666677777888899999999999999999999999999999 999999999988876655544
Q ss_pred Hhhhc--cchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccc
Q psy8365 118 ALGAY--VDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLI 195 (381)
Q Consensus 118 ~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 195 (381)
+.... ..+.+.+++.-++.|++.+...|+.++++.|..|+++...++++.+...++..++||.++|.+....+..
T Consensus 93 ~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~--- 169 (524)
T PF05977_consen 93 AVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAA--- 169 (524)
T ss_pred HHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH---
Confidence 43222 2478889999999999999999999999999999999999999999999999999999999999877533
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhh
Q psy8365 196 GYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSL 275 (381)
Q Consensus 196 gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (381)
+ .+.+.+++.++.+..... .+++++++..++++-.++-+..++.+++ +|.+....+..++...........
T Consensus 170 ---~---~f~inalsfl~~i~~l~~--~~~~~~~~~~~~e~~~~~l~~G~ryv~~-~~~l~~~l~~~~~~~l~~~a~~aL 240 (524)
T PF05977_consen 170 ---A---AFLINALSFLISILALLR--WKPPPPPSSLPRERFFSALREGLRYVRS-SPPLRSVLLRSFLFNLFASAVWAL 240 (524)
T ss_pred ---H---HHHHHHHHHHHHHHHHHH--ccccccccccchhhhhhhHHHHHHHHhc-chHHHHHHHHHHHHHHhhhHHHHh
Confidence 2 333444344443332222 2221111111111111111223333444 566665555555555554555667
Q ss_pred HHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhc--cchhHHHHHHHHH
Q psy8365 276 AQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHT--MIDPHITMVMMGI 353 (381)
Q Consensus 276 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~ 353 (381)
+|.+.++.+|.++...|++.+..++++++++++.+++.+|+++++.+.... .....+.+.+.+. .+...+.+++.|+
T Consensus 241 lPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~-~~~a~~~~~lal~~~~~~~~~~l~l~G~ 319 (524)
T PF05977_consen 241 LPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLAS-LLFALALLLLALSPSFWLALIALFLAGA 319 (524)
T ss_pred hhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHH-HHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 888888889999999999999999999999999999999988777644443 3333444444442 2333445566677
Q ss_pred HHHhhhcchhhhhhhcccCCccccccc
Q psy8365 354 AYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 354 ~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
+.....+...+..++..|++.||++++
T Consensus 320 ~~~~~~~~~~t~~Q~~~P~~~~GRv~s 346 (524)
T PF05977_consen 320 AWIIANSSLNTLVQLSVPDWVRGRVFS 346 (524)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHhHHHH
Confidence 777777778899999999999999876
No 82
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.94 E-value=9.7e-25 Score=199.85 Aligned_cols=318 Identities=14% Similarity=0.158 Sum_probs=189.0
Q ss_pred hhhhhcCchhhHH-HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccc
Q psy8365 46 SYFCYDNPSSLEE-HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVD 124 (381)
Q Consensus 46 ~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~ 124 (381)
.........+..| ++++++|+|+.+.|++.+.+.++..++++++|+++|| +|||+.+.++..+.+++.........++
T Consensus 22 ~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 100 (420)
T PRK09528 22 FFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDK-LGLKKHLLWIISGLLVLFGPFFIYVFAP 100 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333344444 5566799999999999999999999999999999999 9999998887666554433221111111
Q ss_pred -----hhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchh
Q psy8365 125 -----SLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQT 199 (381)
Q Consensus 125 -----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~ 199 (381)
.+....+++++.|.+.....+....+..+ . ++++++..+......++|..++|.+++.+.+. +||+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-------~~~~ 171 (420)
T PRK09528 101 LLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFNI-------NPQI 171 (420)
T ss_pred HHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHhc-------CchH
Confidence 11112233333443333333333333322 2 25677888888899999999999999888652 5787
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcccchhhHHH-hhhcccCcccc---cccccccccCcchhhHHHHHHHhhhhhhcchhh
Q psy8365 200 LGIVLLLAGMTCVLSLLCSLLLGCMDKRAERI-LNRRNAGETEV---ARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSL 275 (381)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (381)
.++..++.. ++.++.. +...++++++. .++++++++++ .+.++.+| +|++|...+..+.....+.....+
T Consensus 172 --~f~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~l~l~~~~~~~~~~~~~~~ 245 (420)
T PRK09528 172 --NFWLGSGSA-LILLVLL--FFAKPDAPSTAKVANALGANASAVSLKDALALLK-LPKFWFLVLYVIGVACFYDVFDQQ 245 (420)
T ss_pred --hHHHHHHHH-HHHHHHH--hcccccccchhhhccchhcccccccHHHHHHHcc-CCCeEeehHHHHHHHHHHHHHHHH
Confidence 444433322 2222222 11222221111 11111111111 12334455 677776665555554444455556
Q ss_pred HHHHHHHhc---CCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh--ccchhHHHHHH
Q psy8365 276 AQELFVKRF---NLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH--TMIDPHITMVM 350 (381)
Q Consensus 276 ~~~~~~~~~---g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 350 (381)
.|.|+.+.. +.+..+.+...+...+...++.++.|++.||+++|+.......... ....+..+ +.+.......+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~-~~~~l~~~~~~~~~~~~~~~l 324 (420)
T PRK09528 246 FPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMA-VRIIGSGFATGPLEVSILKLL 324 (420)
T ss_pred HHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHH-HHHHHHHhcccHHHHHHHHHH
Confidence 777766543 4566677888888888888999999999999999988555444333 33333333 22222333444
Q ss_pred HHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 351 MGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 351 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
.+++.+...+....+..|..|++.+++..+
T Consensus 325 ~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 354 (420)
T PRK09528 325 HAFEVPFLLVGVFKYITLNFDVRLSATIYL 354 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHcCccceeeeee
Confidence 555555555666788889999998887653
No 83
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.94 E-value=2.7e-24 Score=197.44 Aligned_cols=328 Identities=16% Similarity=0.141 Sum_probs=221.5
Q ss_pred HHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHH
Q psy8365 39 MCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFA 118 (381)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~ 118 (381)
.++.....++.....+..++.+.+|+|- .....|+.+.+.++.+++.++.|+++|. +|||+.++.+.++..+|.++++
T Consensus 49 ~~~~~~~~~~~~~~~a~~l~~I~~diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDl-fGRr~~~i~g~~l~vvG~Iv~a 126 (599)
T PF06609_consen 49 FSLAVIAAYFVLVLPASILPYINADIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDL-FGRRYFFIIGSLLGVVGSIVCA 126 (599)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHhcCC-CccchHHHHHHHHHHHHHHHhhHHHHHH-hcchHHHHHHHHHHHhHHHHhh
Confidence 4444444556666777888999999994 5778899999999999999999999999 9999999999999999999777
Q ss_pred hhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccch
Q psy8365 119 LGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQ 198 (381)
Q Consensus 119 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr 198 (381)
. ++|...++.+..+.|+|.|.... ....++|..|.|.|+...++...........++.++..+.. + .+||
T Consensus 127 t---A~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~----~--~~WR 196 (599)
T PF06609_consen 127 T---AQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA----H--SGWR 196 (599)
T ss_pred c---CCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc----C--CCcc
Confidence 6 89999999999999999666654 45668999999999887776655444444444444443322 2 2799
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhh----cc---------------------------cC---------
Q psy8365 199 TLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNR----RN---------------------------AG--------- 238 (381)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---------------------------~~--------- 238 (381)
| .+++..+ ...++++...++++.+++++.+.++ ++ ..
T Consensus 197 w--~~~~~~i-~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~V 273 (599)
T PF06609_consen 197 W--IFYIFII-WSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHV 273 (599)
T ss_pred h--HHHHHHH-HHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccc
Confidence 9 5544444 3334444333333222211110000 00 00
Q ss_pred ---------------------c-ccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChh---hhhh
Q psy8365 239 ---------------------E-TEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSD---AANR 293 (381)
Q Consensus 239 ---------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~ 293 (381)
. ++..-..++++.+|.+....+..++....++....+.|......++.++. ..++
T Consensus 274 Ia~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~ 353 (599)
T PF06609_consen 274 IAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGW 353 (599)
T ss_pred hhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeeh
Confidence 0 00111223444235566666677777777777777888877777776653 5677
Q ss_pred hHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh----ccchhHHHHHHHHHHHHhhhcchhhhhhhc
Q psy8365 294 LNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH----TMIDPHITMVMMGIAYSMVASGLWPLIALV 369 (381)
Q Consensus 294 ~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 369 (381)
......++..++..+.|.+..+++|-|..++.+......++..+.. +....+...++.+++.+..........+-.
T Consensus 354 ~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~ 433 (599)
T PF06609_consen 354 ISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLI 433 (599)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEee
Confidence 7778888888888999999999887776665555444433333322 222345556677888887766667777778
Q ss_pred ccCCcccccccC
Q psy8365 370 IPEYQLGTAYGM 381 (381)
Q Consensus 370 ~p~~~~g~~~g~ 381 (381)
.|+++.|++.|+
T Consensus 434 ~p~~~ig~a~gL 445 (599)
T PF06609_consen 434 VPDEDIGTATGL 445 (599)
T ss_pred eCchHHHHHHHH
Confidence 898888887653
No 84
>KOG2504|consensus
Probab=99.93 E-value=1.9e-24 Score=198.20 Aligned_cols=337 Identities=17% Similarity=0.161 Sum_probs=256.2
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHH
Q psy8365 28 HNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYS 107 (381)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~ 107 (381)
...+.|.+.+..++......-.....+.+.+.++++++.+.++++|+.++......+..++.+.+.|| +|.|.+.+.+.
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~r-fg~R~v~i~G~ 118 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNR-FGCRTVMIAGG 118 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhh-cCchHHHHHHH
Confidence 66788888877777777666666778888999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHH-HHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHH
Q psy8365 108 VLVVIGQLVFALGAYVDSLFITILGRF-IFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLY 186 (381)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~l~~~r~-l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 186 (381)
++.++|.++..+ +++++++++... +.|+|.+..+.+...++..+|+ |+|+.++|+...+.++|..+-|.+...+.
T Consensus 119 ~v~~~g~~lssF---~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~ 194 (509)
T KOG2504|consen 119 LVAALGLLLSSF---ATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLL 194 (509)
T ss_pred HHHHHHHHHHHH---HhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHH
Confidence 999999875555 899988887765 5599999999999999999997 88999999999999999999999988888
Q ss_pred hhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhh-HH---------------------Hh-hhc--cc----
Q psy8365 187 KYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRA-ER---------------------IL-NRR--NA---- 237 (381)
Q Consensus 187 ~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------------------~~-~~~--~~---- 237 (381)
+.. |||+ ..++.+.+..-..+... ......++. ++ .. ++. ..
T Consensus 195 ~~~------G~r~--~~l~~~~~~l~~~~~~~-~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (509)
T KOG2504|consen 195 SKY------GWRG--ALLIFGGISLNVLVAGA-LLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSL 265 (509)
T ss_pred HHh------CcHH--HHHHHHHHHHHHHHHHH-HcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccc
Confidence 877 7998 66666654432222222 221100000 00 00 000 00
Q ss_pred ---------Cc-----cccccc----ccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHH
Q psy8365 238 ---------GE-----TEVARL----SDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVY 299 (381)
Q Consensus 238 ---------~~-----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 299 (381)
++ ..+... .++++ ++.++.+.+...+...++.....++|.|.. ..|++..++..+.++.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~-~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siig 343 (509)
T KOG2504|consen 266 SNLATLKRGPDKWRNSPLQAFLSMLDLSLLK-DPKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIG 343 (509)
T ss_pred cchhhhhhCCccccccchhhhhhhhhHHHHc-CchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHH
Confidence 00 000111 24455 688999999999999999999999999887 58999999999999999
Q ss_pred HHHhhhhhhHHHHHHhhcc-hHHHHHHHHHHHHHHHHHHhh--ccchhHHHHHHHHHHHHhhhcchhhhhhhcccCCccc
Q psy8365 300 TISAFLSPLMGLVVDKTGR-NLFWVFISLMVSIVCHFMVGH--TMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLG 376 (381)
Q Consensus 300 ~~~~i~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g 376 (381)
+..++++++.|++.|+... ++.+...+.+...++...... +.+......+++|++.+.........+.|+++.++..
T Consensus 344 i~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~ 423 (509)
T KOG2504|consen 344 VSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLS 423 (509)
T ss_pred HhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcc
Confidence 9999999999999999874 334344455544444444333 2334555667778888877777777888999888777
Q ss_pred cccc
Q psy8365 377 TAYG 380 (381)
Q Consensus 377 ~~~g 380 (381)
.++|
T Consensus 424 ~a~G 427 (509)
T KOG2504|consen 424 NAYG 427 (509)
T ss_pred hHHH
Confidence 7765
No 85
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.93 E-value=6.8e-24 Score=192.80 Aligned_cols=322 Identities=15% Similarity=0.152 Sum_probs=203.9
Q ss_pred HHHhhhhhhcCchhhHHH-HHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhh
Q psy8365 42 LGFGSYFCYDNPSSLEEH-FTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALG 120 (381)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~ 120 (381)
.++..+.......+..|. +.+++|.++.+.|++.+.+.++..+++++.|+++|| +|||+.++.+....+++.......
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~ 88 (396)
T TIGR00882 10 FFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDK-LGLKKHLLWIISGLLVLFAPFFIY 88 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555556554 566799999999999999999999999999999999 999999988766665543322211
Q ss_pred hcc-----chhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccc
Q psy8365 121 AYV-----DSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLI 195 (381)
Q Consensus 121 ~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 195 (381)
.+. +.+..+++.+++.|++.+...+....+..|.. +++++..+......++|.+++|.+++.+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~------- 159 (396)
T TIGR00882 89 VFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFSI------- 159 (396)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhcc-------
Confidence 111 22344567788888888888888777776643 3345667777788899999999998877542
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhc---ccCcccccccccccccCcchhhHHHHHHHhhhhhhcc
Q psy8365 196 GYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRR---NAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPF 272 (381)
Q Consensus 196 gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (381)
+||. .|+..+.+..+..++ .... ..++++++..+++ ++++++..+.++.++ +|+++...+..+.....+...
T Consensus 160 ~~~~--~f~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~l~~~~~~~~~~~~ 234 (396)
T TIGR00882 160 DPQI--VFWLGSGFALILMLL-LMFA-KPKAPSSATVANALGANASAFSLKLALELFR-QRKFWMFVLYVVGVACVYDVF 234 (396)
T ss_pred CchH--HHHHHHHHHHHHHHH-HHHh-CCCCchhhhhhcccccccCCCCHHHHHHHHc-CCcHHHHHHHHHHHHHHHHHH
Confidence 6888 555544433332222 2111 1121111111110 011112223456666 678777666666655555556
Q ss_pred hhhHHHHHHHhc---CCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh--ccchhHHH
Q psy8365 273 VSLAQELFVKRF---NLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH--TMIDPHIT 347 (381)
Q Consensus 273 ~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 347 (381)
..+.+.|+++.+ +.+....+...+...+...++....+++.||+++|+.+........+ ....... +.+.....
T Consensus 235 ~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l-~~~~~~~~~~~~~~~~~ 313 (396)
T TIGR00882 235 DQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSV-RIIGSSFATTALEVVIL 313 (396)
T ss_pred HHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH-HHHHHHhcCChHHHHHH
Confidence 667788877754 44556678888888888888899999999999999885554443333 3333222 22223333
Q ss_pred HHHHHHHHHhhhcchhhhhhhcccCCcccccc
Q psy8365 348 MVMMGIAYSMVASGLWPLIALVIPEYQLGTAY 379 (381)
Q Consensus 348 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~ 379 (381)
..+.+++..........+..+..|++.++++.
T Consensus 314 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~ 345 (396)
T TIGR00882 314 KMLHAFEVPFLLVGCFKYITSQFDVRLSATIY 345 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcceEEEee
Confidence 44455554444444456677777877776654
No 86
>KOG0254|consensus
Probab=99.93 E-value=1.8e-23 Score=195.56 Aligned_cols=327 Identities=17% Similarity=0.155 Sum_probs=211.9
Q ss_pred HHHHHhhhhh--hcCchhhHHHHHhhh-----cCCh--HHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHH
Q psy8365 40 CLLGFGSYFC--YDNPSSLEEHFTTDM-----HLTN--AQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLV 110 (381)
Q Consensus 40 ~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~ 110 (381)
....+....+ ....++....++++. ..+. .+.+++.+...++..+++++.|+++|+ +|||+.++++.+.+
T Consensus 51 ~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~-~GRk~~l~~~~~~~ 129 (513)
T KOG0254|consen 51 ALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDR-IGRKKTLLLAVVLF 129 (513)
T ss_pred HHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHH
Confidence 3334444443 345556666666532 2222 456999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 111 VIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
.+|.++++. ++|+++++++|+++|+|.|......+.+++|..|++.||...+..+....+|..++..++....+. .
T Consensus 130 ~iG~ii~~~---a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~-~ 205 (513)
T KOG0254|consen 130 LIGAIIIAL---APSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKV-Y 205 (513)
T ss_pred HHHHHHHHH---hhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC-C
Confidence 999998887 789999999999999999999999999999999999999999999999999999985554444332 1
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHhhcccc---------hhhHHHh---hh--cccCc-----------------
Q psy8365 191 KFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMD---------KRAERIL---NR--RNAGE----------------- 239 (381)
Q Consensus 191 ~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~---~~--~~~~~----------------- 239 (381)
.+||. .+..+.+.+++..+.....+..+ ++.++.. .. +++.+
T Consensus 206 ----~~Wr~---~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~ 278 (513)
T KOG0254|consen 206 ----AGWRI---PLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVA 278 (513)
T ss_pred ----ccHHH---HHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcc
Confidence 27996 33333333333333322221000 0000000 00 00000
Q ss_pred ccccccccccc--c-CcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhh
Q psy8365 240 TEVARLSDVKH--F-PVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKT 316 (381)
Q Consensus 240 ~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~ 316 (381)
+.+..++++++ . ++.+....+..+.+..+.+....|.+.+++. .|.+... ........+...++..+...+.||+
T Consensus 279 ~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~-~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~ 356 (513)
T KOG0254|consen 279 EGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS-AGLKSDT-FLASIILGVVNFLGTLVATYLVDRF 356 (513)
T ss_pred cccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00001222222 1 2334455666666777778888888887766 4555333 4444555666777777778999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHhh----cc------c---hhHHHHHHHHHHHHh-hhcchhhhhhhcccCCccccccc
Q psy8365 317 GRNLFWVFISLMVSIVCHFMVGH----TM------I---DPHITMVMMGIAYSM-VASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 317 g~r~~~~~~~~~~~~~~~~~~~~----~~------~---~~~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
|||+.++.....+.+....+... .. . .......++-..+.. ..++.|.+.+|.+|.+.|+++.+
T Consensus 357 gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s 434 (513)
T KOG0254|consen 357 GRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGAS 434 (513)
T ss_pred ccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHH
Confidence 99999766555555444433222 11 1 112222222222222 56888899999999999988764
No 87
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.93 E-value=4.5e-24 Score=197.12 Aligned_cols=330 Identities=13% Similarity=0.144 Sum_probs=217.0
Q ss_pred HHHHHhhhhhhcCchhhHHHH-Hhh--hcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHH
Q psy8365 40 CLLGFGSYFCYDNPSSLEEHF-TTD--MHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLV 116 (381)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~-~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~ 116 (381)
++..+.+.+......+.+|.+ .++ +|+++.+.+++.+.+.++..++++++|+++||++|||+++.++.++.+++.++
T Consensus 16 ~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~ 95 (475)
T TIGR00924 16 FFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFM 95 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHH
Confidence 344455555555555555555 555 89999999999999999999999999999999349999999999999998876
Q ss_pred HHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCc---chHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccc
Q psy8365 117 FALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKE---LNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFG 193 (381)
Q Consensus 117 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 193 (381)
+.. +++++.+.++|.+.|+|.|...+...++++|++|+++ |+++.++.+...++|.++||.+++.+.++.
T Consensus 96 ~~~---~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~---- 168 (475)
T TIGR00924 96 LAM---SIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY---- 168 (475)
T ss_pred HHh---cccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc----
Confidence 665 6788889999999999999999999999999998764 888999999999999999999999988765
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHhhcccch--hhHHH-hhhcccCccc-----------------------------
Q psy8365 194 LIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDK--RAERI-LNRRNAGETE----------------------------- 241 (381)
Q Consensus 194 ~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~----------------------------- 241 (381)
|||+ .|...++ ..+++++.........+ ++++. .++++++...
T Consensus 169 --g~~~--~f~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (475)
T TIGR00924 169 --GYHV--GFNLAAV-GMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILL 243 (475)
T ss_pred --ChHH--HHHHHHH-HHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 6998 5544442 33333333322221110 00000 0000000000
Q ss_pred ----------------cccccccccc-CcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhh----hhhhHHHHHH
Q psy8365 242 ----------------VARLSDVKHF-PVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDA----ANRLNSIVYT 300 (381)
Q Consensus 242 ----------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~ 300 (381)
+.+..+..+. .+.+..+.+...+....+....+.++.+.++..+.+... .+.+.+...+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~ 323 (475)
T TIGR00924 244 MTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPF 323 (475)
T ss_pred HHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHH
Confidence 0000001010 112333444444455555555565677666654443222 5677777777
Q ss_pred HHhhhhhhHHHHHHhhcch-----HHH-HHHHHHHHHHHHHHHhh-----------ccchhHHHHHHHHHHHHhhhcchh
Q psy8365 301 ISAFLSPLMGLVVDKTGRN-----LFW-VFISLMVSIVCHFMVGH-----------TMIDPHITMVMMGIAYSMVASGLW 363 (381)
Q Consensus 301 ~~~i~~~~~g~l~dr~g~r-----~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~g~~~~~~~~~~~ 363 (381)
..++..++..++..|.+|| ... +..+.++...++..... +.+......++.+++.....|...
T Consensus 324 ~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~ 403 (475)
T TIGR00924 324 WVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGL 403 (475)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHH
Confidence 7777777655444444332 221 24455555455444331 233445667788999999999999
Q ss_pred hhhhhcccCCcccccccC
Q psy8365 364 PLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 364 ~~~~~~~p~~~~g~~~g~ 381 (381)
++..|..|++.||+.+|+
T Consensus 404 ~~~~~~aP~~~~g~~~g~ 421 (475)
T TIGR00924 404 SWWTKIAPQRLMGQMLGM 421 (475)
T ss_pred HHHHHhCCHHHHHHHHHH
Confidence 999999999999998763
No 88
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.93 E-value=8.3e-24 Score=195.39 Aligned_cols=333 Identities=13% Similarity=0.165 Sum_probs=210.7
Q ss_pred HHHHHHHHHhhhhhhcCc-hhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHH
Q psy8365 36 LLLMCLLGFGSYFCYDNP-SSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQ 114 (381)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~ 114 (381)
+..+++..+...+..+.. .....++++++|.++++.+++.+.+.....+..+++|+++||++||||++.++.+++.++.
T Consensus 16 ~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~ 95 (489)
T PRK10207 16 FFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGY 95 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHH
Confidence 344444444454444433 3445577889999999999999999988888899999999974799999999999999999
Q ss_pred HHHHhhhccchhH-HHHHHHHHHhccchhhhhhhhhhhhhcccCC--cchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhc
Q psy8365 115 LVFALGAYVDSLF-ITILGRFIFGIGGESLAVAQNSYAVLWFKGK--ELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEK 191 (381)
Q Consensus 115 ~~~~~~~~~~~~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 191 (381)
+.+.+ +++.. .++++|.++|+|.|...+...+++.|++|++ +|+++++++..+.++|..+||.+++.+.++.
T Consensus 96 ~~~~~---~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~-- 170 (489)
T PRK10207 96 FMTGM---SLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF-- 170 (489)
T ss_pred HHHHH---hccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 88776 44433 4558999999999999999999999999877 4577999999999999999999999998876
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHhhcccchh---hH-H-Hhhhcc------------------cCcccc------
Q psy8365 192 FGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKR---AE-R-ILNRRN------------------AGETEV------ 242 (381)
Q Consensus 192 ~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-~~~~~~------------------~~~~~~------ 242 (381)
|||+ .|++.++ ..+.+++.........++ ++ + ..+... .+....
T Consensus 171 ----gw~~--~F~i~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (489)
T PRK10207 171 ----GYSV--TYNLCGA-GLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLI 243 (489)
T ss_pred ----ChHH--HHHHHHH-HHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 7998 5554332 333333332222111000 00 0 000000 000000
Q ss_pred --------------cccccccccCcchhhHHHH--HHHhhhhhhcchhhHHHHHHHhcCCCh----hhhhhhHHHHHHHH
Q psy8365 243 --------------ARLSDVKHFPVSFWMVVVI--IVSYYTSIFPFVSLAQELFVKRFNLDS----DAANRLNSIVYTIS 302 (381)
Q Consensus 243 --------------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~~~~ 302 (381)
.+.++..| +|.+....+. .......+....+..+.|.++..+.+. .....+.+...+..
T Consensus 244 ~~~~i~~~~f~~~~~~~~~~~r-~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~i 322 (489)
T PRK10207 244 VLSIVVTIIFFREAFKLDKTGR-NKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWV 322 (489)
T ss_pred HHHHHHHHHHHHHHhcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHH
Confidence 00011122 2332222211 222334444444556676664333211 01233344445566
Q ss_pred hhhhhhHHHHHHhhcchHH------HHHHHHHHHHHHHHHH-----hh-------ccchhHHHHHHHHHHHHhhhcchhh
Q psy8365 303 AFLSPLMGLVVDKTGRNLF------WVFISLMVSIVCHFMV-----GH-------TMIDPHITMVMMGIAYSMVASGLWP 364 (381)
Q Consensus 303 ~i~~~~~g~l~dr~g~r~~------~~~~~~~~~~~~~~~~-----~~-------~~~~~~~~~~~~g~~~~~~~~~~~~ 364 (381)
++..++.+++.||+++|+. .+..+..+...++... .. +.+......++.+++..+..+...+
T Consensus 323 ii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~ 402 (489)
T PRK10207 323 VVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLA 402 (489)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6788888999999987752 1233333333333211 11 1122334566778888899999999
Q ss_pred hhhhcccCCcccccccC
Q psy8365 365 LIALVIPEYQLGTAYGM 381 (381)
Q Consensus 365 ~~~~~~p~~~~g~~~g~ 381 (381)
.+.+..|++.+|.++|+
T Consensus 403 ~~~~~aP~~~~g~~~g~ 419 (489)
T PRK10207 403 MIAALVPQHLMGFILGM 419 (489)
T ss_pred HHHHhChHHHHHHHHHH
Confidence 99999999999988763
No 89
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.93 E-value=4.3e-24 Score=194.60 Aligned_cols=314 Identities=11% Similarity=0.044 Sum_probs=201.5
Q ss_pred HHHHhhhhhhcCc-hhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCc-hhhhHHHHHHHHHHHHHHH
Q psy8365 41 LLGFGSYFCYDNP-SSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGI-RMGSTIYSVLVVIGQLVFA 118 (381)
Q Consensus 41 ~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~-r~~~~~~~~~~~~~~~~~~ 118 (381)
...+..+..+... ++..+.+.+++|.+.+|+|++.+++.++..++++++|+++|| +|| |+.+.++.+..+++..+..
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr-~g~~r~~~~~~~~~~~~~~~~~~ 87 (418)
T TIGR00889 9 FMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADK-WLSAQKVYAVCHFAGALLLFFAA 87 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHHH
Confidence 3344444555444 555567778899999999999999999999999999999999 965 6677777766656555444
Q ss_pred hhhccchhHHHHHHHHHHhccchhhhhhhhhhhh--------hcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 119 LGAYVDSLFITILGRFIFGIGGESLAVAQNSYAV--------LWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 119 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
. .++++.+++.|++.|++.+...+...+... |..+...|.+..| .+|.++++.+++.+.. ..
T Consensus 88 ~---~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~-~~ 157 (418)
T TIGR00889 88 Q---VTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDI-EL 157 (418)
T ss_pred H---hcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcc-cc
Confidence 3 688999999999999987766666555432 2233334555554 4678888888876622 11
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhccc-CcccccccccccccCcchhhHHHHHHHhhhhh
Q psy8365 191 KFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNA-GETEVARLSDVKHFPVSFWMVVVIIVSYYTSI 269 (381)
Q Consensus 191 ~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (381)
.|+. ++..++... +.++.. + ..+++++++.+++++ ++....+.++.+| +|+++.+.+..++.....
T Consensus 158 -----~~~~---f~~~~~~~~-~~~~~~--~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~k-~~~~~~~~~~~~~~~~~~ 224 (418)
T TIGR00889 158 -----SNIQ---LYITAGSSA-LLGVFA--L-TLPDIPVAKSTAKMSIKVMLGLDAFILFK-NKRMAIFFFFSMLLGAPL 224 (418)
T ss_pred -----hhHH---HHHHHHHHH-HHHHHH--h-cCCCCCCCccccccCHHHHhhhhHHHHhc-CCCeeeHHHHHHHHHhHH
Confidence 3554 444433222 222211 1 222211111000000 0001112334566 678887777777766655
Q ss_pred hcchhhHHHHHHHhcCCCh--------hhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh-c
Q psy8365 270 FPFVSLAQELFVKRFNLDS--------DAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH-T 340 (381)
Q Consensus 270 ~~~~~~~~~~~~~~~g~~~--------~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~ 340 (381)
.....+.+.|+++ .|.++ ...+...+...+..+++.+..|++.||+|+|+.+..... ...++..+... .
T Consensus 225 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~-~~~v~~~l~~~~~ 302 (418)
T TIGR00889 225 QITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLV-AWALRFGFFAYGD 302 (418)
T ss_pred HHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH-HHHHHHHHHHHcC
Confidence 5666777887765 45443 556888888889999999999999999999988555444 33343333332 1
Q ss_pred c-c----hhHHHHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 341 M-I----DPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 341 ~-~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
. . ...+..++.+++.+...+....++.|.+|++.|++++|
T Consensus 303 ~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g 347 (418)
T TIGR00889 303 PEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQG 347 (418)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 1 1 12334556677777777777889999999999998876
No 90
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.92 E-value=7e-24 Score=195.48 Aligned_cols=317 Identities=15% Similarity=0.134 Sum_probs=207.7
Q ss_pred hHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhh---cCchh-hhHHHHHHHHHHHHHHHhhhcc---chhHH
Q psy8365 56 LEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRV---FGIRM-GSTIYSVLVVIGQLVFALGAYV---DSLFI 128 (381)
Q Consensus 56 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~---~G~r~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 128 (381)
..+.+.+++|+++.++|++.++..+..++.+|+.|+++||. +|||| .++.+....+++.+++...... .....
T Consensus 22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 101 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVY 101 (437)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 45678889999999999999999999999999999999961 46655 4556767777766655542110 12566
Q ss_pred HHHHHHHHhccchhhhhhhhhhhhhcc-cCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhc-cccccchhhHHHHHH
Q psy8365 129 TILGRFIFGIGGESLAVAQNSYAVLWF-KGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEK-FGLIGYQTLGIVLLL 206 (381)
Q Consensus 129 l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~-~~~~gWr~~~~~~~~ 206 (381)
+++.+++.+++.+...++..++..|.. ++++|++..++.+.+..+|..+++.+.+.+....+. ....+||+ .+.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~--~~~i~ 179 (437)
T TIGR00792 102 AYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFM--FALVL 179 (437)
T ss_pred HHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHH--HHHHH
Confidence 777888889988888888888888887 468999999999999999998888877777654431 11137998 55544
Q ss_pred HHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCC
Q psy8365 207 AGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNL 286 (381)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 286 (381)
+++..+..++. ....++++++..++++++.+....++++++ +|+++...+..++..........+.+.|.++..+
T Consensus 180 ~~l~~~~~~~~---~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 254 (437)
T TIGR00792 180 ALIGVVSLIIC---FFGTKERYSEIPKNIEKKLSLKQIFKALFK-NDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG- 254 (437)
T ss_pred HHHHHHHHHHH---HcCCEecCCCCCcccccCCCHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-
Confidence 44333322221 112222111100111111111233455666 7888887777777766666555555555555555
Q ss_pred ChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhcc---chhHHHHHHHHHHHHhhhcchh
Q psy8365 287 DSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTM---IDPHITMVMMGIAYSMVASGLW 363 (381)
Q Consensus 287 ~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~ 363 (381)
++...+.+.....++.+++.++.+++.||+|+|+..... ..+..++........ +...+..++.+++.+...+..+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 333 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGG-ILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVW 333 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH-HHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667777777889999999999999999998875544 333334443333311 2223344556777777777888
Q ss_pred hhhhhccc-------CCccccccc
Q psy8365 364 PLIALVIP-------EYQLGTAYG 380 (381)
Q Consensus 364 ~~~~~~~p-------~~~~g~~~g 380 (381)
++.+|..| ++.+|+++|
T Consensus 334 ~~~~~~~~~~~~~~~~~~~G~~~~ 357 (437)
T TIGR00792 334 ALVADTVDYGEWKTGVRAEGLVYS 357 (437)
T ss_pred HHHhhhhhhhhhhcCccchHHHHH
Confidence 88888765 344565544
No 91
>PTZ00207 hypothetical protein; Provisional
Probab=99.92 E-value=4.1e-22 Score=184.34 Aligned_cols=338 Identities=12% Similarity=0.089 Sum_probs=228.4
Q ss_pred CccchhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHH
Q psy8365 26 PHHNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTI 105 (381)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~ 105 (381)
+-+..+||..+..........+ ....++...|.+++++|+|..+++++.+.. .....++++.|++.|| +|+|+++.+
T Consensus 20 ~~~e~~Rw~~lva~~~~~~~~g-~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr-~G~R~vlli 96 (591)
T PTZ00207 20 PINEPRRFALLVLGAFCSICTS-FMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDY-LGPRPIFVL 96 (591)
T ss_pred cccccchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHH-hCcHHHHHH
Confidence 3445667766655544444333 224556777899999999999999998874 3455678889999999 999999999
Q ss_pred HHHHHHHHHHHHHhhh---ccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhh
Q psy8365 106 YSVLVVIGQLVFALGA---YVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVA 182 (381)
Q Consensus 106 ~~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 182 (381)
+.++..++.++++++. ..++++.+.+.|++.|+|.+...+.....+.+|+| ++||++.|+...+.++|.++.+.+.
T Consensus 97 g~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~ 175 (591)
T PTZ00207 97 SMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQ 175 (591)
T ss_pred HHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998877631 12689999999999999999899999999999997 7899999999999999998644444
Q ss_pred HHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccch-----------hhHHHhhh-----------------
Q psy8365 183 EPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDK-----------RAERILNR----------------- 234 (381)
Q Consensus 183 ~~l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~----------------- 234 (381)
..+... +|++ .++..+++..+++++...++...++ ++++..++
T Consensus 176 ~~l~~~-------~~~~--~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~ 246 (591)
T PTZ00207 176 LAFFSD-------NTSA--YFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFV 246 (591)
T ss_pred HHHHHH-------hHHH--HHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehh
Confidence 433321 3555 4555555555555444443321110 00000000
Q ss_pred --------------------------------------------c--------------c-cCc---------------c
Q psy8365 235 --------------------------------------------R--------------N-AGE---------------T 240 (381)
Q Consensus 235 --------------------------------------------~--------------~-~~~---------------~ 240 (381)
. + +++ +
T Consensus 247 ~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (591)
T PTZ00207 247 YGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAA 326 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCcccccccccccccccccc
Confidence 0 0 000 0
Q ss_pred c--------c-------cccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhh--hhhhHHHHHHHHh
Q psy8365 241 E--------V-------ARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDA--ANRLNSIVYTISA 303 (381)
Q Consensus 241 ~--------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~ 303 (381)
+ + .++.+.++ +.++|++.+..++.......+.+++.++.+..-|.+... ...+.++..+.+.
T Consensus 327 ~~~~~~~~~~~~~P~~~~t~~q~l~-~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~ 405 (591)
T PTZ00207 327 EDKVVETDVDYIAPQFQETFIEGLK-TARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSA 405 (591)
T ss_pred ccccccccccCCCCCCcchHHHHHh-chhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHH
Confidence 0 0 01111222 578999999999999888888888888666543763333 3337888999999
Q ss_pred hhhhhHHHHHHhhcchH--------HHHHHHHHHHHHHHHHHhhcc-chhHHHHHHHHHHHHhhhcchhhhhhhcccCCc
Q psy8365 304 FLSPLMGLVVDKTGRNL--------FWVFISLMVSIVCHFMVGHTM-IDPHITMVMMGIAYSMVASGLWPLIALVIPEYQ 374 (381)
Q Consensus 304 i~~~~~g~l~dr~g~r~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 374 (381)
+|++..|.+.....||+ ..+....++.+..++++...+ ...++..++.|+++|...+...+.++|++. ++
T Consensus 406 ~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~ 484 (591)
T PTZ00207 406 VGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KD 484 (591)
T ss_pred hhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cc
Confidence 99999999883332222 223333333333333322223 567888999999999999999999999999 66
Q ss_pred cccc
Q psy8365 375 LGTA 378 (381)
Q Consensus 375 ~g~~ 378 (381)
-|+-
T Consensus 485 ~g~~ 488 (591)
T PTZ00207 485 PAKH 488 (591)
T ss_pred hHHH
Confidence 6653
No 92
>KOG2615|consensus
Probab=99.92 E-value=1e-23 Score=177.78 Aligned_cols=303 Identities=14% Similarity=0.073 Sum_probs=197.0
Q ss_pred ChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhh
Q psy8365 67 TNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVA 146 (381)
Q Consensus 67 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 146 (381)
+..-.|.+.+.+.+.+.+.++.+|.++|| +|||.++.++.+..++..++.+. ++||..+.++|++.|+..| ....
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~-yGRkpvll~c~~~va~s~ll~~~---S~~F~afv~aR~l~Gi~kg-nl~v 140 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDR-YGRKPVLLACLIGVALSYLLWAL---SRNFAAFVLARFLGGIFKG-NLSV 140 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhh-hCchHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhhhccC-chHH
Confidence 44567999999999999999999999999 99999999999999998887766 7999777788999999955 4556
Q ss_pred hhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHH-HHHhhcccc
Q psy8365 147 QNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLL-CSLLLGCMD 225 (381)
Q Consensus 147 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 225 (381)
..++++|.+++|+|+++++..+..+++|.++||.+|+.+....+.. | +. .+.....+.++.+.. ...+.++.+
T Consensus 141 ~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~---g-~~--p~alP~~~v~i~a~~~v~~~~~~lp 214 (451)
T KOG2615|consen 141 IRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSIS---G-SY--PFALPCLLVFILAAGDVTFFPWFLP 214 (451)
T ss_pred HHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhh---c-cC--chHHHHHHHHHHHHHHHHHHHHhCC
Confidence 6799999999999999999999999999999999999998822111 0 11 233333333333333 122222222
Q ss_pred hhhHHHhhh-ccc-------Cccccccccc-----ccccCcc------hh-hHHHHHHHhhhhhhcchhhHHHHHHHhcC
Q psy8365 226 KRAERILNR-RNA-------GETEVARLSD-----VKHFPVS------FW-MVVVIIVSYYTSIFPFVSLAQELFVKRFN 285 (381)
Q Consensus 226 ~~~~~~~~~-~~~-------~~~~~~~~~~-----~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 285 (381)
+.-+.+++. ++. .+++..+..+ ..| |+. .+ .+.+..+.+...+..+.++.+.+-.+.+|
T Consensus 215 ETL~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lr-n~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg 293 (451)
T KOG2615|consen 215 ETLPLRKRNDEHSTLQEAADDRLALLKFARIFKVAALR-NPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFG 293 (451)
T ss_pred ccccchhhcccccchhhhhhhhhhhcchhhhhhhhhhc-CccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccC
Confidence 211111111 000 0011111111 111 111 11 22233333333333333444443356789
Q ss_pred CChhhhhhhHHHHHHHHhhhhhhHHHHHHhhc-chHHHHHHHHHHHHHHHHHHhh--ccchhHHHHHHHHHHHHhhhcch
Q psy8365 286 LDSDAANRLNSIVYTISAFLSPLMGLVVDKTG-RNLFWVFISLMVSIVCHFMVGH--TMIDPHITMVMMGIAYSMVASGL 362 (381)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g-~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~ 362 (381)
+++.+.|.+.+..++.+.+.+.......||.+ .-+..+.....+....+.++.. ..........+..+......+..
T Consensus 294 ~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~L 373 (451)
T KOG2615|consen 294 YSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTCL 373 (451)
T ss_pred CChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHHH
Confidence 99999999999988888877776666666654 2222233444444444444443 33344555666677777778888
Q ss_pred hhhhhhcccCCcccccccC
Q psy8365 363 WPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 363 ~~~~~~~~p~~~~g~~~g~ 381 (381)
..+.....|+++||+++|+
T Consensus 374 t~Lv~~~~~~~qrG~~~Gi 392 (451)
T KOG2615|consen 374 TSLVHKYGPQSQRGTLNGI 392 (451)
T ss_pred HHHHHhcCCcccchHHHHH
Confidence 9999999999999999874
No 93
>KOG2563|consensus
Probab=99.91 E-value=1.6e-22 Score=174.73 Aligned_cols=349 Identities=13% Similarity=0.104 Sum_probs=251.2
Q ss_pred ccchhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHH
Q psy8365 27 HHNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIY 106 (381)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~ 106 (381)
+..++||.+++..++..+.+.+.+..++++..+....|| +.+..-|+.-+|++.+....+++-|+.|| +|-|....++
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk-~GLR~a~llg 115 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDK-FGLRTALLLG 115 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcc-cchHHHHHHH
Confidence 567889999999999999999999999999999999999 88888999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHHHHhhhcc---chhH--HHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhh
Q psy8365 107 SVLVVIGQLVFALGAYV---DSLF--ITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFV 181 (381)
Q Consensus 107 ~~~~~~~~~~~~~~~~~---~~~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 181 (381)
....++|+.+-..+... +.++ ....+..+.+..+-........+..-||++++|..+..+-.+++.+|.++|.++
T Consensus 116 t~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ll 195 (480)
T KOG2563|consen 116 TVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLL 195 (480)
T ss_pred HHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhc
Confidence 99999999987775433 4555 777888999988777777777888899999999999999999999999999999
Q ss_pred hHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcc-cCcccccccccccccCcchhhHHH
Q psy8365 182 AEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRN-AGETEVARLSDVKHFPVSFWMVVV 260 (381)
Q Consensus 182 ~~~l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 260 (381)
...+..+........|.....++.++.+.. +.+....+.+..+|+.++...+.. .+.+-..+.++.++ ++++..+.+
T Consensus 196 ppilV~~~~~~~~~~~~~~~~f~~~~~l~~-l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~-n~~F~il~~ 273 (480)
T KOG2563|consen 196 PPILVPSSKDSEDNSWLFFTLFLGVECLAA-LLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFK-NRQFIILAI 273 (480)
T ss_pred cceecCCCCCcchhHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHc-CccHHHHHH
Confidence 988877652211124655323333333222 222222222222222222211111 12223445666777 899998888
Q ss_pred HHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHH-HHHHhh
Q psy8365 261 IIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVC-HFMVGH 339 (381)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~-~~~~~~ 339 (381)
.+......+++..+.+..-+. ..|++...+|.......+++++++.+.|.+.||.++-+...........++ +.+...
T Consensus 274 ~ygi~~g~F~~l~~~l~~~l~-~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~ 352 (480)
T KOG2563|consen 274 CYGIGLGLFNSLSTLLNLALC-PSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTC 352 (480)
T ss_pred HHhhhHHHHHHHHHHhhhccc-cccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 888887777777766554333 357888899999999999999999999999999987665454444444444 222222
Q ss_pred -----ccchhHHHHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 340 -----TMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 340 -----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
..........++|.+.....|+...+..|..-|..-++..|
T Consensus 353 t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsG 398 (480)
T KOG2563|consen 353 TLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSG 398 (480)
T ss_pred hccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccce
Confidence 11223334445566666667888888888765555555544
No 94
>KOG3764|consensus
Probab=99.91 E-value=1.2e-23 Score=178.52 Aligned_cols=290 Identities=14% Similarity=0.116 Sum_probs=209.4
Q ss_pred hhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccch
Q psy8365 62 TDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGE 141 (381)
Q Consensus 62 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 141 (381)
++.+-+++++|++.+...+.+.+.+++.|.+.|| +|+|-.+++|..++...++++++ .+++++++++|.+||+|.+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~-iGy~ipm~~Gl~vmf~sTilFaf---g~sy~~l~vAR~LQgvgsA 174 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDR-IGYKIPMVAGLFVMFLSTILFAF---GNSYPMLFVARSLQGVGSA 174 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHH-hccccHHHHHHHHHHHHHHHHHH---cchhHHHHHHHHHhhhhHH
Confidence 4456688899999999999999999999999999 99999999999999999998887 7999999999999999999
Q ss_pred hhhhhhhhhhhhcccCC-cchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHHh
Q psy8365 142 SLAVAQNSYAVLWFKGK-ELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLL 220 (381)
Q Consensus 142 ~~~~~~~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~ 220 (381)
...++..++++|.+|++ +|++++|+...+.++|.++||++|+.+++..+.. . .|.+.+++..+-+.+..+
T Consensus 175 ~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~------a--PFlVL~~v~Lld~~L~l~- 245 (464)
T KOG3764|consen 175 FADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKS------A--PFLVLAIVLLLDGALQLL- 245 (464)
T ss_pred HHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCc------C--cHHHHHHHHHHHHHHHHh-
Confidence 99999999999999876 5899999999999999999999999999988644 3 455555543333322221
Q ss_pred hcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHH
Q psy8365 221 LGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYT 300 (381)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 300 (381)
..++.+.+ ++++++..+++++++ +|..+.........+.......-.++.+..+.+..+..+.|.......+
T Consensus 246 --vi~p~~~~-----~~~~~~~~~~~~Ll~-dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~ 317 (464)
T KOG3764|consen 246 --VIEPTEMD-----PDSTEQGTPMWSLLM-DPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASL 317 (464)
T ss_pred --eeCccccC-----ccccccCccHHHHHh-CchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeeccccc
Confidence 12221111 112334445667777 6887777666666666655666667777888888666688998888899
Q ss_pred HHhhhhhhHHHHHHhhcchHHHHH-HHHHHHHHHHHHHhh--ccchhHHHHHHHHHHHHhhhcchhhhhhhcccC
Q psy8365 301 ISAFLSPLMGLVVDKTGRNLFWVF-ISLMVSIVCHFMVGH--TMIDPHITMVMMGIAYSMVASGLWPLIALVIPE 372 (381)
Q Consensus 301 ~~~i~~~~~g~l~dr~g~r~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 372 (381)
...++..+.|.+.||+++.+.+.. .+.++...+.....+ +....++.....+++.+...........++++.
T Consensus 318 ~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~ 392 (464)
T KOG3764|consen 318 SYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDP 392 (464)
T ss_pred chhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcch
Confidence 999999999999999995444333 333332222222222 122233333444444444444444444444443
No 95
>KOG0253|consensus
Probab=99.91 E-value=2.7e-22 Score=168.31 Aligned_cols=336 Identities=11% Similarity=0.041 Sum_probs=223.3
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHH
Q psy8365 28 HNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYS 107 (381)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~ 107 (381)
..+.+|..............+.....+.+.|...+.+|.+..|..++......+..+++..+|.++|+ +||||.+.+..
T Consensus 72 fgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~-~grr~~f~~T~ 150 (528)
T KOG0253|consen 72 FGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADT-IGRRKGFNLTF 150 (528)
T ss_pred cccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhh-hhcchhhhhhH
Confidence 45677888877777777777666777778889999999999999999999999999999999999999 99999999988
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHh
Q psy8365 108 VLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYK 187 (381)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (381)
+...+..++- +.++|+..+++.|.+.|+|.|+ .|...++-.|..|..+|...+-.. ..+.+|.+....+......
T Consensus 151 l~t~v~~~is---~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~ 225 (528)
T KOG0253|consen 151 LVTGVFGVIS---GASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMS 225 (528)
T ss_pred HHHHHHHHhh---cCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHH
Confidence 8887776644 4489999999999999999988 888888888999999999887666 8999999999999888888
Q ss_pred hhhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhh---------HHH---hh---------------------h
Q psy8365 188 YVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRA---------ERI---LN---------------------R 234 (381)
Q Consensus 188 ~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~---~~---------------------~ 234 (381)
++ |||| ..+..+....+.+ .++.+..+.+ ++. .+ +
T Consensus 226 ~~------gwr~--~l~~~~~pl~~~a----~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~ 293 (528)
T KOG0253|consen 226 NF------GWRY--LLFTSSTPLMFAA----RFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDR 293 (528)
T ss_pred hh------hHHH--HHHHHHhHHHHHH----HHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhh
Confidence 77 7998 3333332222222 1221211100 000 00 0
Q ss_pred cccC------------cccccccccccc--cCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhc--CC------------
Q psy8365 235 RNAG------------ETEVARLSDVKH--FPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRF--NL------------ 286 (381)
Q Consensus 235 ~~~~------------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~------------ 286 (381)
++++ ++...+..+++. ++++...+...++...+.+++.........+... +.
T Consensus 294 ~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~ 373 (528)
T KOG0253|consen 294 QEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETR 373 (528)
T ss_pred hhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhh
Confidence 0000 111122222322 1344455555555555555555444333333211 10
Q ss_pred ---Chhh-hhhh-HHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh-ccchhHHHHHHHHHHHHhhhc
Q psy8365 287 ---DSDA-ANRL-NSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH-TMIDPHITMVMMGIAYSMVAS 360 (381)
Q Consensus 287 ---~~~~-~~~~-~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~ 360 (381)
.... ..+. ..+..+....|.++.++++||+|||+.+.....+.++..+.+... +.....+..+..-.+.+..+.
T Consensus 374 ~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fq 453 (528)
T KOG0253|consen 374 ANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQ 453 (528)
T ss_pred hcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchhe
Confidence 1111 1111 234456778888899999999999999554444444333333333 222333334444555566778
Q ss_pred chhhhhhhcccCCcccccccC
Q psy8365 361 GLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 361 ~~~~~~~~~~p~~~~g~~~g~ 381 (381)
+.|.|..|++|+..|+++.|.
T Consensus 454 vaYvYtPEVyPTavRatgvGt 474 (528)
T KOG0253|consen 454 VAYVYTPEVYPTAVRATGVGT 474 (528)
T ss_pred EEEEecCcccchhhhhcchhh
Confidence 889999999999999998773
No 96
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.91 E-value=5.5e-22 Score=179.91 Aligned_cols=327 Identities=11% Similarity=0.004 Sum_probs=213.4
Q ss_pred HHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHH--HHhhhhhhHHhhhh-hhhhhhhcCchhhhHHHHHHHHH
Q psy8365 36 LLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLY--SWYSWPNVICCFIG-GFLIDRVFGIRMGSTIYSVLVVI 112 (381)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~--s~~~~~~~~~~~~~-g~l~dr~~G~r~~~~~~~~~~~~ 112 (381)
+..++..++.++.......+..|.+.+|.|.|.+++|.+. +...+...+.+++. ++..|| +||||.+++...+...
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~-~g~r~~~i~~~~~~~~ 81 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWR-LGRRRSWVLPMQCLVS 81 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-CCcchhHHHHHHHHHH
Confidence 4455667788888888888999999999999999999973 66677777888888 457999 9999997666533222
Q ss_pred -HHHHHHhhhccch-hHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 113 -GQLVFALGAYVDS-LFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 113 -~~~~~~~~~~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
............+ ...++....+.++..+...+...++..|..++++++...+....+..+|..+|+...+.+.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~- 160 (390)
T TIGR02718 82 ACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKF- 160 (390)
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 1222221111222 3344455555667767777888888889998888899999998888999999998888888776
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhh
Q psy8365 191 KFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIF 270 (381)
Q Consensus 191 ~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (381)
|||. .++..+++..+.. +.... ..++++++ +++++++..+.++.+| +|.++......++......
T Consensus 161 -----gw~~--~f~~~a~l~~~~~-~~~~~--~~~~~~~~----~~~~~~~~~~~~~~l~-~~~~~~~~~~~~l~~~~~~ 225 (390)
T TIGR02718 161 -----GQRP--AFLLVACVPLASL-VCVLW--LKDRAVAS----PEAPLARRASLFRFFR-RPLAWSLLALALLSAMTAV 225 (390)
T ss_pred -----CHHH--HHHHHHHHHHHHH-HHHHH--cCCCCcCc----cccchhhHHHHHHHHc-CcCHHHHHHHHHHHHHHHH
Confidence 7998 5655554333222 22211 22221111 0111112223456666 6777777777777777777
Q ss_pred cchhhHHHHHHHhcCCChhhhhhhHHHHHH-HHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh-c---cchh-
Q psy8365 271 PFVSLAQELFVKRFNLDSDAANRLNSIVYT-ISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH-T---MIDP- 344 (381)
Q Consensus 271 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~---~~~~- 344 (381)
....+.+.|++| .|+++++.+........ ...++..+.|++.||+++|+.+................. . ....
T Consensus 226 ~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (390)
T TIGR02718 226 SGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIA 304 (390)
T ss_pred HHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHH
Confidence 777888888877 69999999998887764 566778899999999999887655443332222222211 1 1111
Q ss_pred --HHHHHHHHHHHHhhhcchhhhhhhcccC-Cccccccc
Q psy8365 345 --HITMVMMGIAYSMVASGLWPLIALVIPE-YQLGTAYG 380 (381)
Q Consensus 345 --~~~~~~~g~~~~~~~~~~~~~~~~~~p~-~~~g~~~g 380 (381)
+....+.+++.+...+...+...+..++ +.+|+.++
T Consensus 305 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~ 343 (390)
T TIGR02718 305 VAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVT 343 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHH
Confidence 1112223344555556667776676665 77787654
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.90 E-value=5.9e-22 Score=184.12 Aligned_cols=327 Identities=14% Similarity=0.151 Sum_probs=198.6
Q ss_pred HHHHhhhhhhcCchh-hHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhc-CchhhhHHHHHHHHHHHHHHH
Q psy8365 41 LLGFGSYFCYDNPSS-LEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVF-GIRMGSTIYSVLVVIGQLVFA 118 (381)
Q Consensus 41 ~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~-G~r~~~~~~~~~~~~~~~~~~ 118 (381)
...+...+..+.... ...++++++|+++++.+++.+.+........+++|+++|| + |||+.+..+.++.+++..++.
T Consensus 28 ~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr-~~G~r~~~~~g~~~~~ig~~l~~ 106 (500)
T PRK09584 28 SIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDK-VLGTKRVIMLGAIVLAIGYALVA 106 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHH
Confidence 333444444333333 3456678999999999998888776666667899999999 8 999999999999998877766
Q ss_pred hhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCc--chHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcccccc
Q psy8365 119 LGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKE--LNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIG 196 (381)
Q Consensus 119 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~g 196 (381)
.. .++.+.+.++|.++|++.|...+...+++.|++|+++ |+.++++++.+.++|..+||.+++.+.++. |
T Consensus 107 ~~--~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~------g 178 (500)
T PRK09584 107 WS--GHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKY------G 178 (500)
T ss_pred Hh--cccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhh------C
Confidence 52 2456677889999999989888998999999998653 456788999999999999999999998765 7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhc-ccchhh-HHHhhhcccC---------------------cccc-----------
Q psy8365 197 YQTLGIVLLLAGMTCVLSLLCSLLLG-CMDKRA-ERILNRRNAG---------------------ETEV----------- 242 (381)
Q Consensus 197 Wr~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~---------------------~~~~----------- 242 (381)
||+ .|...+ +...++++..+... ..+++. ++..++.+.. +++.
T Consensus 179 ~~~--~F~i~~-i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (500)
T PRK09584 179 WSV--AFALSV-VGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALG 255 (500)
T ss_pred HHH--HHHHHH-HHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 998 454433 23333332222211 111110 0000000000 0000
Q ss_pred ---cccc---cccc-cCcchhhHHHHHHHhhhhhhcchhhHHHHHHH--hcCCCh------hhhhhhHHHHHHHHhhhhh
Q psy8365 243 ---ARLS---DVKH-FPVSFWMVVVIIVSYYTSIFPFVSLAQELFVK--RFNLDS------DAANRLNSIVYTISAFLSP 307 (381)
Q Consensus 243 ---~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~------~~~~~~~~~~~~~~~i~~~ 307 (381)
...+ +..+ .+++.+.... .+.....++......+.++.. ..+.+. ...+.+.+...+..++..+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p 334 (500)
T PRK09584 256 IVVIFGKEAFAMKGAARRKMIVAFI-LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSP 334 (500)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHH
Confidence 0000 0011 0233332222 222223333333333433322 111111 1245556666666667777
Q ss_pred hHHHHHHhhcchH---HHHHHHHHHHHHHHHHHhhc-----------cchhHHHHHHHHHHHHhhhcchhhhhhhcccCC
Q psy8365 308 LMGLVVDKTGRNL---FWVFISLMVSIVCHFMVGHT-----------MIDPHITMVMMGIAYSMVASGLWPLIALVIPEY 373 (381)
Q Consensus 308 ~~g~l~dr~g~r~---~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 373 (381)
+.+++-+|.++|. ..+..+..+...++..+... .+......++.+++..+..|...+++.+..|++
T Consensus 335 ~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~ 414 (500)
T PRK09584 335 ILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQR 414 (500)
T ss_pred HHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHH
Confidence 6655556655431 22444555555555443321 123445567788999999999999999999999
Q ss_pred ccccccc
Q psy8365 374 QLGTAYG 380 (381)
Q Consensus 374 ~~g~~~g 380 (381)
.||+++|
T Consensus 415 ~rg~~~g 421 (500)
T PRK09584 415 LMGFIMG 421 (500)
T ss_pred HHHHHHH
Confidence 9999876
No 98
>KOG0252|consensus
Probab=99.89 E-value=2.5e-22 Score=173.49 Aligned_cols=344 Identities=12% Similarity=0.064 Sum_probs=222.1
Q ss_pred chhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhh-c-------CChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCch
Q psy8365 29 NIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDM-H-------LTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIR 100 (381)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r 100 (381)
.++....+.+..+..+.+.++...++.+.|.+...| | .++...+.+..+..+|.+++|++.|++.|| +|||
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~-~GRK 114 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDK-FGRK 114 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhh-hcch
Confidence 455556667777788888999999999988887654 2 345567889999999999999999999999 9999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhcc----chhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhH
Q psy8365 101 MGSTIYSVLVVIGQLVFALGAYV----DSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGST 176 (381)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 176 (381)
+++...++++.+++++++++.-. .-..++...|++.|+|.|+-+|...++.+|....++||...+...+..++|..
T Consensus 115 ~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gil 194 (538)
T KOG0252|consen 115 KVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGIL 194 (538)
T ss_pred hhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHh
Confidence 99999999999999866553211 23578899999999999999999999999999999999999999888888888
Q ss_pred hhhhhhHHHHhhhhccc---------cccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHh-----h-----hccc
Q psy8365 177 VNMFVAEPLYKYVEKFG---------LIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERIL-----N-----RRNA 237 (381)
Q Consensus 177 ~g~~~~~~l~~~~~~~~---------~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~ 237 (381)
.|.+++-.+...+...- ..=||. .+.++++ .+++ .+.++...++.++-. + ++.+
T Consensus 195 aG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl---~~glg~v---pa~~-~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~ 267 (538)
T KOG0252|consen 195 AGGIVALIVSAIFEKIFNGPSTYPHLDGVWRI---IFGLGAV---PALL-VLYFRLKMPETARYTALVSKKLKQAAGDMK 267 (538)
T ss_pred hccHHHHHHHHHHhccCCCCCCchHHHHHHHH---HHHHHHH---HHHH-HHHhhhcCCcchhHHHHhhcCHhhhhhccc
Confidence 88877766654332110 013886 3333332 2222 222233333222111 0 0000
Q ss_pred C----------------ccccccccccccc-----CcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhh---
Q psy8365 238 G----------------ETEVARLSDVKHF-----PVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANR--- 293 (381)
Q Consensus 238 ~----------------~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--- 293 (381)
+ +.++.+.+.+.+. -+++.......|..-.+.+....+....++. .|..+.....
T Consensus 268 k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~ 346 (538)
T KOG0252|consen 268 KVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHEL 346 (538)
T ss_pred cccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHH
Confidence 0 0000111111110 1445555666777777888888777776653 5554443322
Q ss_pred -----hHHHHHHHH-hhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh-c-cchhHHHHHHHHHHHHh--h--hcc
Q psy8365 294 -----LNSIVYTIS-AFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH-T-MIDPHITMVMMGIAYSM--V--ASG 361 (381)
Q Consensus 294 -----~~~~~~~~~-~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~g~~~~~--~--~~~ 361 (381)
...+...++ +.+..+...++|++||++..+.......+..+.+... + .......++++++...+ + +..
T Consensus 347 ~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~t 426 (538)
T KOG0252|consen 347 FKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNAT 426 (538)
T ss_pred HHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCce
Confidence 222333333 3366677788999999998666555555544444332 2 11112223333333332 3 345
Q ss_pred hhhhhhhcccCCcccccccC
Q psy8365 362 LWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 362 ~~~~~~~~~p~~~~g~~~g~ 381 (381)
...+.+|.+|.+.|+++.|+
T Consensus 427 tfivpaE~FParvR~t~hGI 446 (538)
T KOG0252|consen 427 TFIVPAEIFPARVRSTCHGI 446 (538)
T ss_pred eEEeehhhchHHHhhhhhhH
Confidence 57788999999999998875
No 99
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.87 E-value=7e-20 Score=166.20 Aligned_cols=335 Identities=13% Similarity=0.185 Sum_probs=210.6
Q ss_pred HHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhh----hhcCchhhhHHH-HHHHHH
Q psy8365 38 LMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLID----RVFGIRMGSTIY-SVLVVI 112 (381)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~~G~r~~~~~~-~~~~~~ 112 (381)
.++...+...+.+....+..+.+.+++|.++.+.+++..+..+...+.+++.|+++| | +||||.++++ ....++
T Consensus 8 ~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr-~GRRrp~il~g~~~~~~ 86 (477)
T TIGR01301 8 RVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSR-FGRRRPFIAAGAALVAF 86 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCC-CCChHHHHHHHHHHHHH
Confidence 334444444556666666667788899999999999999999999999999999999 8 9999998875 444444
Q ss_pred HHHHHHhhhccchh-----------------HHHHHHHHHHhccchhhhhhhhhhhhhcccCCcc--hHHHHHHHHHHhH
Q psy8365 113 GQLVFALGAYVDSL-----------------FITILGRFIFGIGGESLAVAQNSYAVLWFKGKEL--NMVFGFQLSLSRV 173 (381)
Q Consensus 113 ~~~~~~~~~~~~~~-----------------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~ 173 (381)
+.+++.. +++. ..+.++-.+..++.....++..++++|.+|+++| +.++++.+...++
T Consensus 87 ~l~ll~~---~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~l 163 (477)
T TIGR01301 87 AVILIGF---AADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAI 163 (477)
T ss_pred HHHHHHh---CchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHH
Confidence 4444433 3333 2233333444557777888899999999998865 6899999999999
Q ss_pred hhHhhhhhhHHH--Hhhhhcc-----cc--ccchhhHHHHHHHHHHHHHHHHHHHhhcccchhh--HHHhh-hc---ccC
Q psy8365 174 GSTVNMFVAEPL--YKYVEKF-----GL--IGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRA--ERILN-RR---NAG 238 (381)
Q Consensus 174 g~~~g~~~~~~l--~~~~~~~-----~~--~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~---~~~ 238 (381)
|.++|+.+++.. .+.++.. .. .+-|+ .|+ ++++..+++.+..... .++++. +++.+ ++ .++
T Consensus 164 G~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~F~-i~a~~l~i~~l~t~~~-v~E~~~~~~~~~~~~~~~~~~~ 239 (477)
T TIGR01301 164 GNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKS--CFL-IDIILLAILTYIALSA-VKENPLIGSDDFINSEAAPPSK 239 (477)
T ss_pred HHHHHHHHHHHHhHHHhcccccccccccccchHHH--HHH-HHHHHHHHHHHHHeee-eeccCCCccccchhhhcccccc
Confidence 999999998865 2222110 00 02344 343 3433333333333221 122111 00000 00 001
Q ss_pred cccccc----cccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHH-hcCCChhh------h---h-hhHHHHHHHHh
Q psy8365 239 ETEVAR----LSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVK-RFNLDSDA------A---N-RLNSIVYTISA 303 (381)
Q Consensus 239 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~------~---~-~~~~~~~~~~~ 303 (381)
.+.... ++.+++.+|.++.+++..++...+.+.+..|.+.|..+ .++.++.+ . | +......+...
T Consensus 240 ~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~ 319 (477)
T TIGR01301 240 HGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLG 319 (477)
T ss_pred cchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 33444457999999999999999999999998888764 45543321 1 2 22333445555
Q ss_pred hhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh-cc----------------------chhHHHHHHHHHHHHhhhc
Q psy8365 304 FLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH-TM----------------------IDPHITMVMMGIAYSMVAS 360 (381)
Q Consensus 304 i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~----------------------~~~~~~~~~~g~~~~~~~~ 360 (381)
+.+++..++.+|+|+|+..-..+..+...++....+ .. +...+.+...|+.+.....
T Consensus 320 i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~s 399 (477)
T TIGR01301 320 ITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYS 399 (477)
T ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHH
Confidence 666777888999986555444444444444443322 10 2334556677888888889
Q ss_pred chhhhhhhcccCCcc--ccccc
Q psy8365 361 GLWPLIALVIPEYQL--GTAYG 380 (381)
Q Consensus 361 ~~~~~~~~~~p~~~~--g~~~g 380 (381)
..++++++..|++.+ |..+|
T Consensus 400 iPfal~s~~~~~~~~~~G~~mg 421 (477)
T TIGR01301 400 IPFALASIRSSNLGAGQGLSMG 421 (477)
T ss_pred HhHHHHHHHccccCCCCcchhh
Confidence 999999999996434 65554
No 100
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.87 E-value=8.7e-21 Score=174.00 Aligned_cols=310 Identities=16% Similarity=0.152 Sum_probs=221.6
Q ss_pred hhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhh----hhcCchhhhH-HHHHHHHHHHHHHHhh-h--cc--c
Q psy8365 55 SLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLID----RVFGIRMGST-IYSVLVVIGQLVFALG-A--YV--D 124 (381)
Q Consensus 55 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~~G~r~~~~-~~~~~~~~~~~~~~~~-~--~~--~ 124 (381)
...+.+.+.+|+++...|.+..+..+..++..|+.|.++| | +||||..+ ++....+++.+++... + .. .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr-~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~ 101 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTR-WGRRRPWILIGAILLALSFFLLFSPPPAGLSFTA 101 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccc-ccccceEeehhhHHHHHHHHHhhccccchhhhhh
Confidence 3446778888999999999999999999999999999999 8 99887766 4666677766655432 1 01 1
Q ss_pred hhHHHHHHHHHHhccchhhhhhhhhhhhhccc-CCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcccc-ccchhhHH
Q psy8365 125 SLFITILGRFIFGIGGESLAVAQNSYAVLWFK-GKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGL-IGYQTLGI 202 (381)
Q Consensus 125 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~-~gWr~~~~ 202 (381)
....+.+..++..++......+..++..|..+ +++|.+..+....+..+|..+...+.+.+.+..+.... .+|++ .
T Consensus 102 ~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~--~ 179 (428)
T PF13347_consen 102 KLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRW--M 179 (428)
T ss_pred HHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHH--H
Confidence 33445777777799988889999999999997 57899999999999999998888888888777665432 26887 4
Q ss_pred HHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHH
Q psy8365 203 VLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVK 282 (381)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (381)
..+.+++..+.. +......+|+++..++++++.+-+..++++++ ||.++.+....++............+.|.++
T Consensus 180 ~~v~~iv~~v~~----~i~~~~~ke~~~~~~~~~~~~~~~~~~~~~~~-nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~ 254 (428)
T PF13347_consen 180 ALVLAIVGLVFF----LITFFFVKERSVEVTEQEKKISLRDSLRSLFR-NRPFRILLLAFFLQWLAFALMNTFLPYYFTY 254 (428)
T ss_pred HHHHHHHHHHHh----hhhhheeeeccccccccccccccccchhhhcc-cchHHHHHHHHHHHHhhhhhhhhHHHHHHHH
Confidence 444444333222 22222222211111222223333445677777 7888888888888888888778888888888
Q ss_pred hcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh---ccchhHHHHHHHHHHHHhhh
Q psy8365 283 RFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH---TMIDPHITMVMMGIAYSMVA 359 (381)
Q Consensus 283 ~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~ 359 (381)
..|.+ ...+.......++++++.++.+++.||+|||+..........+........ +.+...+..++.|++.+...
T Consensus 255 vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~ 333 (428)
T PF13347_consen 255 VLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFF 333 (428)
T ss_pred HhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccc
Confidence 88776 556777778888999999999999999999998555444444333333322 23344556667788888888
Q ss_pred cchhhhhhhcccCC
Q psy8365 360 SGLWPLIALVIPEY 373 (381)
Q Consensus 360 ~~~~~~~~~~~p~~ 373 (381)
...+++.+|..+.+
T Consensus 334 ~~~~a~~ad~id~~ 347 (428)
T PF13347_consen 334 VIPWAMLADVIDYD 347 (428)
T ss_pred cccccccccchhhH
Confidence 88899999988753
No 101
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.86 E-value=3.3e-25 Score=205.07 Aligned_cols=301 Identities=17% Similarity=0.258 Sum_probs=188.2
Q ss_pred hHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccc---hhHHHHHHHHHHhccchhhh
Q psy8365 68 NAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVD---SLFITILGRFIFGIGGESLA 144 (381)
Q Consensus 68 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~ 144 (381)
+.+.++..+...++..+++++.|.++|| +|||+.+.++.++..++.++..+ ++ +++.+.++|+++|++.|...
T Consensus 45 ~~~~~~~~~~~~~g~~~G~~~~g~~~d~-~GRk~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~R~~~G~~~g~~~ 120 (451)
T PF00083_consen 45 SLLSSLLTSSFFIGAIVGALIFGFLADR-YGRKPALIISALLMIIGSILIAF---APSYNNFWMLLIGRFLIGFGIGGAY 120 (451)
T ss_pred HHHHHHHHHHHHhhhccccccccccccc-ccccccccccccccccccccccc---ccccccccccccccccccccccccc
Confidence 3467899999999999999999999999 99999999999999999887766 67 99999999999999999999
Q ss_pred hhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhcc-
Q psy8365 145 VAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGC- 223 (381)
Q Consensus 145 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~- 223 (381)
+....++.|..|+++|++..++.+....+|..++..++..+....+.. +||. .+..+.+..++.++....++.
T Consensus 121 ~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~---~Wr~---~~~~~~~~~l~~~~~~~~~pES 194 (451)
T PF00083_consen 121 VVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNW---GWRI---LLIFGAIPSLLVLLLRFFLPES 194 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccc---cccc---cccccccccccccccccccccc
Confidence 999999999999999999999999999999999887776553322212 5998 333322222222221111110
Q ss_pred -----cch---hhHHHhhh---------c--ccC------cccccccccccccC---cchhhHHHHHHHh-hhhhhcchh
Q psy8365 224 -----MDK---RAERILNR---------R--NAG------ETEVARLSDVKHFP---VSFWMVVVIIVSY-YTSIFPFVS 274 (381)
Q Consensus 224 -----~~~---~~~~~~~~---------~--~~~------~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~ 274 (381)
.+. +.++..++ + +.. ++++.+++++++.+ +++.......... ..+.+....
T Consensus 195 P~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ 274 (451)
T PF00083_consen 195 PRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFY 274 (451)
T ss_pred cceecccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence 000 00000000 0 000 00012345555521 2233222222222 233334445
Q ss_pred hHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHH--hh--ccc----h--h
Q psy8365 275 LAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMV--GH--TMI----D--P 344 (381)
Q Consensus 275 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~--~~--~~~----~--~ 344 (381)
+.+.++ +..+.+.. -.......+...++.+....+.||+|||+.++.......+....+. .. ... . .
T Consensus 275 ~~~~i~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (451)
T PF00083_consen 275 YSPSIF-ENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILS 351 (451)
T ss_pred cccccc-cccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 555544 44566655 2222334455666677777999999999886555444443333332 11 111 1 1
Q ss_pred HHHHHHHHHHHH-hhhcchhhhhhhcccCCcccccccC
Q psy8365 345 HITMVMMGIAYS-MVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 345 ~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
.....+....++ ...+..+.+..|.+|++.|+++.|+
T Consensus 352 i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~ 389 (451)
T PF00083_consen 352 IVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGL 389 (451)
T ss_pred ceeeeecccccccccccccccccccccccccccccccc
Confidence 112222222333 3567778999999999999998774
No 102
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.85 E-value=3e-19 Score=162.79 Aligned_cols=327 Identities=14% Similarity=0.087 Sum_probs=195.3
Q ss_pred HHHHHhhhhhhcCchhhHH-HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhc-CchhhhHHHHHHHHHHHHHH
Q psy8365 40 CLLGFGSYFCYDNPSSLEE-HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVF-GIRMGSTIYSVLVVIGQLVF 117 (381)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~-G~r~~~~~~~~~~~~~~~~~ 117 (381)
+.......+.........| ++.+++|.++.+.+.+.+.+.....++.+++|+++|| + ||||.+.++.++..++.+++
T Consensus 15 ~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDR-ilGrrr~iliG~il~~lg~lll 93 (493)
T PRK15462 15 VALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADK-VLGNRMAVMLGALLMAIGHVVL 93 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCcHHHHHHHHHHHHHHHHHH
Confidence 3333444444443444444 4567789999999999999999999999999999999 8 99999999999998887655
Q ss_pred HhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCC--cchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccc
Q psy8365 118 ALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGK--ELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLI 195 (381)
Q Consensus 118 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 195 (381)
... ..+...+.++..+.++|.|...+...++++|.+|++ +|..++++.....++|..++|.+.+.+.+..
T Consensus 94 ~~~--~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~------ 165 (493)
T PRK15462 94 GAS--EIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY------ 165 (493)
T ss_pred HHh--hcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh------
Confidence 431 112233444444555666666777788999999875 6999999999999999999999999997765
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccc--------------------------c------
Q psy8365 196 GYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEV--------------------------A------ 243 (381)
Q Consensus 196 gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~------ 243 (381)
|||+ .|.. +++..+++++.........++.. ..++++.++++. .
T Consensus 166 Gw~~--~F~i-aaigm~l~li~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (493)
T PRK15462 166 SWAM--GFGL-AAVGMIAGLVIFLCGNRHFTHTR-GVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALI 241 (493)
T ss_pred ChHH--HHHH-HHHHHHHHHHHHHHhhhhhccCC-CCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6998 4544 33344444443322111100000 000000000000 0
Q ss_pred -------------ccccccc-cCcchhhHHHHHHH---hhhhhhcchhhHHHHHHHhc-----CCChhhhhhhHHHHHHH
Q psy8365 244 -------------RLSDVKH-FPVSFWMVVVIIVS---YYTSIFPFVSLAQELFVKRF-----NLDSDAANRLNSIVYTI 301 (381)
Q Consensus 244 -------------~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~ 301 (381)
..++..+ .+++.+...+.... ....+....+-+..|..+.- |++ ....+..++..+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ 320 (493)
T PRK15462 242 VATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFA 320 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHH
Confidence 0001000 12344333222222 22222222233344443321 222 2355667777777
Q ss_pred HhhhhhhHHHHHHhhcc--hH----HHHHHHHHHHHHHHHHHhh-----c------cchhHHHHHHHHHHHHhhhcchhh
Q psy8365 302 SAFLSPLMGLVVDKTGR--NL----FWVFISLMVSIVCHFMVGH-----T------MIDPHITMVMMGIAYSMVASGLWP 364 (381)
Q Consensus 302 ~~i~~~~~g~l~dr~g~--r~----~~~~~~~~~~~~~~~~~~~-----~------~~~~~~~~~~~g~~~~~~~~~~~~ 364 (381)
-++.+++.+++-.|..| |. .-...+......++..+.. . .+.......+..+|.-+..|+..+
T Consensus 321 ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls 400 (493)
T PRK15462 321 VMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMS 400 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHH
Confidence 77788887777666632 21 1133444444444444322 1 112334455667777888999999
Q ss_pred hhhhcccCCccccccc
Q psy8365 365 LIALVIPEYQLGTAYG 380 (381)
Q Consensus 365 ~~~~~~p~~~~g~~~g 380 (381)
.++++.|++.+|..+|
T Consensus 401 ~~~~laP~~~~g~~mg 416 (493)
T PRK15462 401 QITRIEIPGVTGVLTG 416 (493)
T ss_pred HHHHhChHHHHHHHHH
Confidence 9999999999998876
No 103
>KOG0255|consensus
Probab=99.85 E-value=1.8e-19 Score=169.58 Aligned_cols=133 Identities=14% Similarity=0.097 Sum_probs=117.4
Q ss_pred HhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccc
Q psy8365 61 TTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGG 140 (381)
Q Consensus 61 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 140 (381)
.+.++.+.....+..+++.+|..+|++++|+++|| +|||++++.+.++..++.+..++ ++|++.+++.|++.|++.
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~a~---a~~~~~~~~~Rfl~G~~~ 185 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILTAF---APNYWMFLIFRFLSGFFG 185 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHHHH---hCcHHHHHHHHHHHHhhc
Confidence 45667788899999999999999999999999999 99999999999999999886666 899999999999999999
Q ss_pred hhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHH
Q psy8365 141 ESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAG 208 (381)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~ 208 (381)
++.......++.|++++++|+.+..+ ......+..+++..++.+.. +||+ .++...+
T Consensus 186 ~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--------~Wr~--~~~~~~~ 242 (521)
T KOG0255|consen 186 SGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--------DWRW--LFWIISI 242 (521)
T ss_pred cchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--------hHHH--HHHHHHH
Confidence 99999999999999999999999999 66666777777777777765 5999 5554444
No 104
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.84 E-value=4.5e-19 Score=159.03 Aligned_cols=322 Identities=13% Similarity=0.118 Sum_probs=210.9
Q ss_pred HHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcC-chhhhHHHHHHHHHHHHHHHhhh
Q psy8365 43 GFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFG-IRMGSTIYSVLVVIGQLVFALGA 121 (381)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G-~r~~~~~~~~~~~~~~~~~~~~~ 121 (381)
++..+.....+.|..+..-++.|.|..|+|.+.+...+...+.++++|.++|| .+ +||.+.+..++.++......
T Consensus 11 ~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr-~~~~~~~l~~~~l~~~~~~~~~~--- 86 (400)
T PF03825_consen 11 YFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADR-FGSAKRILALLSLLSALALLLLA--- 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhH-hhhHHHHHHHHHHHHHHHHHHHH---
Confidence 44455555666677788888999999999999999999999999999999999 76 46666665555544433332
Q ss_pred ccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhh-HHHHhhhhccccccchhh
Q psy8365 122 YVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVA-EPLYKYVEKFGLIGYQTL 200 (381)
Q Consensus 122 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~-~~l~~~~~~~~~~gWr~~ 200 (381)
..++++.+++..++..+......|...++..+..+ +++.-.|-.-...++|.+++.... ..+....+.. +..+
T Consensus 87 ~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~---~~~~- 160 (400)
T PF03825_consen 87 FSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGIS---GTSL- 160 (400)
T ss_pred HhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccc---cccH-
Confidence 36788888888888888877788888888887765 334444555556667776665432 2232222211 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHH
Q psy8365 201 GIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELF 280 (381)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (381)
.+++.+....+.+ ...+.+ .+.++++. ++++.++....+..+++| +|+++...+..++.......+.++.+.|+
T Consensus 161 -~~~i~~~~~~ll~-~~~l~l--p~~~~~~~-~~~~~~~~~~~~~~~llk-~~~~~~Fll~~~l~~~~~~~~~~f~~~yl 234 (400)
T PF03825_consen 161 -IFYIAAILSLLLA-GFALFL--PKTPPKRS-AKESVKKLLGLDALKLLK-NPRFLVFLLAAFLIGISHAAYYTFFSIYL 234 (400)
T ss_pred -HHHHHHHHHHHHH-HHHHhC--CCCccccc-cCCCcccccchHHHHHhc-CccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222111111 111111 11111111 111111111112235666 78888888888888888888889999999
Q ss_pred HHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhc-cch--hHHHH----HHHHH
Q psy8365 281 VKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHT-MID--PHITM----VMMGI 353 (381)
Q Consensus 281 ~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~----~~~g~ 353 (381)
++..|.+....+...++..+..++.-...+++.+|+|.++. +..+....++=..+.... .+. .+... .+.|+
T Consensus 235 ~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~l-l~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~ 313 (400)
T PF03825_consen 235 QELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWL-LLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGL 313 (400)
T ss_pred HHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH-HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhH
Confidence 88655777888888888888888888899999999998877 444555555655555442 221 12222 34788
Q ss_pred HHHhhhcchhhhhhhcccCCcccccccC
Q psy8365 354 AYSMVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 354 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
.++........++.+..|++.|+++.|+
T Consensus 314 tf~~~~~a~~~yi~~~~p~~~~at~Q~l 341 (400)
T PF03825_consen 314 TFGLFHAASVRYIDRIAPPELRATAQGL 341 (400)
T ss_pred HHHHHHHHHHHHHHHhCCccchHHHHHH
Confidence 8998888889999999999999988763
No 105
>PRK09669 putative symporter YagG; Provisional
Probab=99.84 E-value=2.5e-19 Score=165.24 Aligned_cols=308 Identities=12% Similarity=0.089 Sum_probs=193.3
Q ss_pred hhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhh---cCchhh-hHHHHHHHHHHHHHHHhhh---ccchhH
Q psy8365 55 SLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRV---FGIRMG-STIYSVLVVIGQLVFALGA---YVDSLF 127 (381)
Q Consensus 55 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~---~G~r~~-~~~~~~~~~~~~~~~~~~~---~~~~~~ 127 (381)
.+...+.+++|+++.++|.+.++..+..++..|+.|+++||. +||||. ++.+.+..++...+....+ ....+.
T Consensus 31 ~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~ 110 (444)
T PRK09669 31 FLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKII 110 (444)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 345678889999999999999999999999999999999971 355444 4456666666654443311 012345
Q ss_pred HHHHHHHHHhccchhhhhhhhhhhhhcc-cCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcc-ccccchhhHHHHH
Q psy8365 128 ITILGRFIFGIGGESLAVAQNSYAVLWF-KGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKF-GLIGYQTLGIVLL 205 (381)
Q Consensus 128 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~-~~~gWr~~~~~~~ 205 (381)
.+++..++.+.+......+..++.+|+. ++++|++..+.......+|..+++.+...+....+.. ...+|+. .+.+
T Consensus 111 ~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~--~~~i 188 (444)
T PRK09669 111 YACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFY--AMMV 188 (444)
T ss_pred HHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH--HHHH
Confidence 6667777777777777778889999998 5578999999999999999988888777766655421 1126776 4444
Q ss_pred HHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcC
Q psy8365 206 LAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFN 285 (381)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 285 (381)
.+++..+..++. +...+++.++ +++++.+...+.++.++ ||.++.+....++............+.|.+...+
T Consensus 189 ~~ii~~v~~~~~---~~~~~e~~~~---~~~~~~~~~~~~~~~~~-n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~ 261 (444)
T PRK09669 189 MGLLGVVLFFCC---FFMTKERYTP---EVDNSSSVWKDLKLLLG-NSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL 261 (444)
T ss_pred HHHHHHHHHHHH---hCCeEEecCC---CCcCCCCHHHHHHHHhC-CchHHHHHHHHHHHHHHHHHHhhhhheeeeeecC
Confidence 443322222211 1111111111 11111222334566667 7888877776666555544333333333333333
Q ss_pred CChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhccc---hhHHHHHHHHHHHHhhhcch
Q psy8365 286 LDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMI---DPHITMVMMGIAYSMVASGL 362 (381)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~ 362 (381)
++...+.......+..+++.++.+++.||+|||+..........+....+...... ...+..++.+++.+...+..
T Consensus 262 -~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 340 (444)
T PRK09669 262 -RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQ 340 (444)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 23334445555567778888899999999999888655443333233323222111 23444566788888888888
Q ss_pred hhhhhhcccC
Q psy8365 363 WPLIALVIPE 372 (381)
Q Consensus 363 ~~~~~~~~p~ 372 (381)
+++.+|..+.
T Consensus 341 ~am~ad~~d~ 350 (444)
T PRK09669 341 WSMFSDVVDY 350 (444)
T ss_pred HHHHHhhhhh
Confidence 9999998863
No 106
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.84 E-value=1.1e-19 Score=158.57 Aligned_cols=243 Identities=12% Similarity=0.099 Sum_probs=173.1
Q ss_pred cchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcc----------
Q psy8365 123 VDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKF---------- 192 (381)
Q Consensus 123 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~---------- 192 (381)
.++|+.++++-++.|.|.+..++..+.++++..|+|++.+.+++.+..+++|..++|.+++.+.......
T Consensus 7 ~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~ 86 (310)
T TIGR01272 7 QRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANA 86 (310)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhH
Confidence 5789999999999999999999999999999999999999999999999999999999999887432100
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcc
Q psy8365 193 GLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPF 272 (381)
Q Consensus 193 ~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (381)
....||+ .++.++++..++.++.. ....++.+++ ++++..+++..+.++.++ +|.++...+..+++.....+.
T Consensus 87 ~~~~~~~--~yl~ia~~~~~~~i~~~---~~~~p~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~f~yvg~e~~~ 159 (310)
T TIGR01272 87 EAAKVHT--PYLLLAGALAVLAIIFA---FLPLPELQEA-DVARVSSGDTTQKTSAFQ-FTHLVLGALGIFVYVGAEVSA 159 (310)
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHHH---HccCCCCCcc-cccccccccccchhhHHh-hHHHHHHHHHHHHHHHHHHHH
Confidence 0125777 55556554444333221 1111111111 111101111112233455 678888778888877788899
Q ss_pred hhhHHHHHHHh--cCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh-ccchhHHHHH
Q psy8365 273 VSLAQELFVKR--FNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH-TMIDPHITMV 349 (381)
Q Consensus 273 ~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 349 (381)
..|.+.|+.+. +|+++.+.+...+....+.++++.+.+++.||+++|+.+........ ++..+... +.......+.
T Consensus 160 ~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~-~~~~l~~~~~~~~~~~~~~ 238 (310)
T TIGR01272 160 GSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAV-LLSIGAALTHGYVAMWFVL 238 (310)
T ss_pred HHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH-HHHHHHHHcCCHHHHHHHH
Confidence 99999999864 69999999999999999999999999999999998887544433333 33333322 2233345566
Q ss_pred HHHHHHHhhhcchhhhhhhcccCC
Q psy8365 350 MMGIAYSMVASGLWPLIALVIPEY 373 (381)
Q Consensus 350 ~~g~~~~~~~~~~~~~~~~~~p~~ 373 (381)
+.|++.+...|...+...+..|++
T Consensus 239 l~g~~~s~i~P~~~s~a~~~~~~~ 262 (310)
T TIGR01272 239 ALGLFNSIMFPTIFSLALNALGRH 262 (310)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhh
Confidence 778888889999898888888764
No 107
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.83 E-value=3.8e-19 Score=165.04 Aligned_cols=308 Identities=12% Similarity=0.075 Sum_probs=189.1
Q ss_pred hHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhh----hhcCchhhh-HHHHHHHHHHHHHHHhhh-ccc--hhH
Q psy8365 56 LEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLID----RVFGIRMGS-TIYSVLVVIGQLVFALGA-YVD--SLF 127 (381)
Q Consensus 56 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~~G~r~~~-~~~~~~~~~~~~~~~~~~-~~~--~~~ 127 (381)
+..++.+.+|+++.++|.+..+..+..++..|+.|+++| | +||||.+ +.+....+++..++.... ..+ .+.
T Consensus 29 l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr-~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~ 107 (473)
T PRK10429 29 LMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSR-WGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYV 107 (473)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCC-CCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHH
Confidence 345677778999999999999999999999999999999 6 6996554 456666666544443211 011 244
Q ss_pred HHHHHHHHHhccchhhhhhhhhhhhhcc-cCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccc-cccchhhHHHHH
Q psy8365 128 ITILGRFIFGIGGESLAVAQNSYAVLWF-KGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFG-LIGYQTLGIVLL 205 (381)
Q Consensus 128 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~-~~gWr~~~~~~~ 205 (381)
.+++..++.+++.....++..++..|.. ++++|.+..+....+.++|..+.+.+...+.+..+... ..+|+. ...+
T Consensus 108 ~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~--~~~i 185 (473)
T PRK10429 108 FVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQM--FTLV 185 (473)
T ss_pred HHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH--HHHH
Confidence 5666677778888888888999999999 58899999998777778887776666555544433211 124555 2222
Q ss_pred HHHHHHHHHHHHHHhhcccchhhH-HHh--hhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHH
Q psy8365 206 LAGMTCVLSLLCSLLLGCMDKRAE-RIL--NRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVK 282 (381)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (381)
.++ +.++..+......+|++ +.. ++++++.+.+..++.+++ ||.++.+....++..........+.+.|.+.
T Consensus 186 ~~~----~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y 260 (473)
T PRK10429 186 LIA----FFIVSTIITLRNVHEVYSSDNQVSAEGSHLTLKDIVALIYK-NDQLSCLLGMALAYNIASNIINGFAIYYFTY 260 (473)
T ss_pred HHH----HHHHHHHHHHcCceecCCccccccccccCCCHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHhhheeeEEEE
Confidence 222 22221111111111111 000 001111112223344445 7888877777777766666555555544444
Q ss_pred hcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHh---hccc---hhHHHHHHHHHHHH
Q psy8365 283 RFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVG---HTMI---DPHITMVMMGIAYS 356 (381)
Q Consensus 283 ~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~g~~~~ 356 (381)
..+ +....+.+.....+..+++.++.+++.||+|+|+.+........+....... .... ...+..++.+++.+
T Consensus 261 ~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~ 339 (473)
T PRK10429 261 VIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTA 339 (473)
T ss_pred ECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHH
Confidence 333 4555666666667888899999999999999998865444332222222211 1111 22334455677777
Q ss_pred hhhcchhhhhhhcccC
Q psy8365 357 MVASGLWPLIALVIPE 372 (381)
Q Consensus 357 ~~~~~~~~~~~~~~p~ 372 (381)
...+..+++.+|..+.
T Consensus 340 ~~~~~~~am~ad~id~ 355 (473)
T PRK10429 340 LFWVLQVIMVADTVDY 355 (473)
T ss_pred HHHHHHHHHHhhhhhh
Confidence 7777788899998763
No 108
>PRK09848 glucuronide transporter; Provisional
Probab=99.81 E-value=2e-18 Score=159.48 Aligned_cols=301 Identities=9% Similarity=0.007 Sum_probs=182.5
Q ss_pred HHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhc----Cchhhh-HHHHHHHHHHHHHHHhhh--ccc--hhH
Q psy8365 57 EEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVF----GIRMGS-TIYSVLVVIGQLVFALGA--YVD--SLF 127 (381)
Q Consensus 57 ~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~----G~r~~~-~~~~~~~~~~~~~~~~~~--~~~--~~~ 127 (381)
.+++++.+|+++.++|.+.+...+..++..++.|+++|| . ||||.+ ..+.+...+...+..... ..+ ...
T Consensus 32 ~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr-~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (448)
T PRK09848 32 LSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDS-VNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVV 110 (448)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeec-CCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHH
Confidence 357778889999999999999999999999999999999 7 667655 445444444433322111 111 223
Q ss_pred HHHHHHHHHhccchhhhhhhhhhhhhccc-CCcchHHHHHHHHHHhHh-----hHhhhhhhHHHHhhhhccccccchhhH
Q psy8365 128 ITILGRFIFGIGGESLAVAQNSYAVLWFK-GKELNMVFGFQLSLSRVG-----STVNMFVAEPLYKYVEKFGLIGYQTLG 201 (381)
Q Consensus 128 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g-----~~~g~~~~~~l~~~~~~~~~~gWr~~~ 201 (381)
..++...+.+++.+...++..++..+..+ +++|.+..+....+.+++ ..++|.+.+. .+.....+|..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~----~g~~~~~~~~~-- 184 (448)
T PRK09848 111 YAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNS----SPEEMVSVYHF-- 184 (448)
T ss_pred HHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----CCCchhhhHHH--
Confidence 34555667788888888887787777664 467888877766554443 3333433322 11110001211
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHH
Q psy8365 202 IVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFV 281 (381)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (381)
.. ++..+++++..+......+|+.+ ++++++..+..++++++ ||.++...+..++............+.|++
T Consensus 185 ~~----~~~~v~~~~~~~~~~~~~~e~~~---~~~~~~~~~~~~~~l~~-n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (448)
T PRK09848 185 WT----IVLAIAGMVLYFICFKSTRENVV---RIVAQPSLKISLQTLKR-NRPLFMLCIGALCVLISTFAVSASSLFYVR 256 (448)
T ss_pred HH----HHHHHHHHHHHHHHHcCcEeccC---CCccCCCHHHHHHHHhC-CchHHHHHHHHHHHHHHHHHHhhhheeeEe
Confidence 11 11222333222222222222111 11111122233566777 788888888888777777777777777888
Q ss_pred HhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhcc----chhHHHHHHHHHHHHh
Q psy8365 282 KRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTM----IDPHITMVMMGIAYSM 357 (381)
Q Consensus 282 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~~ 357 (381)
+.+|.++...++......++.+++.++.+++.||+++|+.+..... +..++.....+.. +.......+.+++.+.
T Consensus 257 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~-~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~ 335 (448)
T PRK09848 257 YVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGAL-LGTCGYLLFFWVSVWSLPVALVALAIASIGQGV 335 (448)
T ss_pred eecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH-HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHH
Confidence 8788776655554554466678889999999999999888655443 3333333332311 1223345567788888
Q ss_pred hhcchhhhhhhcccCC
Q psy8365 358 VASGLWPLIALVIPEY 373 (381)
Q Consensus 358 ~~~~~~~~~~~~~p~~ 373 (381)
..+..+++.+|..|.+
T Consensus 336 ~~~~~~al~~~~~~~~ 351 (448)
T PRK09848 336 TMTVMWALEADTVEYG 351 (448)
T ss_pred HHHHHHHHHHHhhhhh
Confidence 7788888888888754
No 109
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.81 E-value=5.7e-19 Score=162.83 Aligned_cols=327 Identities=13% Similarity=0.011 Sum_probs=204.7
Q ss_pred HHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcC-----chhhhHHHHHH
Q psy8365 35 ALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFG-----IRMGSTIYSVL 109 (381)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G-----~r~~~~~~~~~ 109 (381)
.+.++...++..++.........+.+++++|+|+++++...+...+...+ .+++|.++|| ++ ||+.++++.++
T Consensus 27 ~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~-~~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 27 VLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDT-FPLFGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHh-cCCCCccchHHHHHHHHH
Confidence 34455556677776644455666788889999999999999999999988 5559999999 97 66766776655
Q ss_pred HH-HHHHHHHhhhccchhH-HHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHH---HHHHHHhHhhHhhhhhhHH
Q psy8365 110 VV-IGQLVFALGAYVDSLF-ITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFG---FQLSLSRVGSTVNMFVAEP 184 (381)
Q Consensus 110 ~~-~~~~~~~~~~~~~~~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~---~~~~~~~~g~~~g~~~~~~ 184 (381)
.. +.. ...+..++.. ...+..++.+++.+...++..++..|..+ |++....+ ......++|.++|+.+++.
T Consensus 105 ~~~~~~---~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~ 180 (468)
T TIGR00788 105 GSAILY---GLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGP 180 (468)
T ss_pred HHHHHH---HhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHH
Confidence 42 221 1222234443 44447889999999999999999999998 55544333 3333445899999999999
Q ss_pred HHhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhccc---------------Cccccccccccc
Q psy8365 185 LYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNA---------------GETEVARLSDVK 249 (381)
Q Consensus 185 l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 249 (381)
+.+.. +||. .+++.+++..+. .+.. ....+++.....+.+++ .++...+.++.+
T Consensus 181 l~~~~------~~~~--~f~~~a~l~ll~-~~~~--~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 249 (468)
T TIGR00788 181 LLDKT------LTRI--LFLITAALLLLQ-LFVS--NLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAI 249 (468)
T ss_pred HHHhc------Ccch--HHHHHHHHHHHH-HHHH--HhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 88776 6888 565555433332 2211 11222210000000000 000011122233
Q ss_pred ccCcchhhHHHHHHH-hhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHH
Q psy8365 250 HFPVSFWMVVVIIVS-YYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLM 328 (381)
Q Consensus 250 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~ 328 (381)
+ +|.++...+..++ ..........+. .+.++..|+++.+.|.......++.+++....+++.+|++.|+.+......
T Consensus 250 ~-~~~i~~~l~fifl~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l 327 (468)
T TIGR00788 250 Q-LLEIAKPLIFIFLSYANLPGASGSVF-CATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLL 327 (468)
T ss_pred h-cHHHHHHHHHHHHHHhhcCCCCceeE-EEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 4 5667664444444 222211211110 123356899999999999999999999999999999999988875554444
Q ss_pred HHHHHHHHHhh----------cc-chhHHHHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 329 VSIVCHFMVGH----------TM-IDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 329 ~~~~~~~~~~~----------~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
........... .. +......++.+++.+........+.++..|++.+|+.+|
T Consensus 328 ~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~a 390 (468)
T TIGR00788 328 YTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFA 390 (468)
T ss_pred HHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHH
Confidence 44333221101 01 122233456677777777777999999999999998876
No 110
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.80 E-value=1.5e-17 Score=143.99 Aligned_cols=310 Identities=12% Similarity=0.054 Sum_probs=216.4
Q ss_pred HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcC-----chhhhHHH-HHHHHHHHHHHHhh--hccc------
Q psy8365 59 HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFG-----IRMGSTIY-SVLVVIGQLVFALG--AYVD------ 124 (381)
Q Consensus 59 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G-----~r~~~~~~-~~~~~~~~~~~~~~--~~~~------ 124 (381)
.+..|++++....+.+.+...+... ..+.+|+.+|+ .+ ||..+++. .+..+.+..+.... -.+.
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~-~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~ 82 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDT-HPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSS 82 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHHH-HHHHhcccccc-CcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 4677999999999999999887754 69999999999 88 88766664 44444433322221 0112
Q ss_pred --h-hH--HHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchh
Q psy8365 125 --S-LF--ITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQT 199 (381)
Q Consensus 125 --~-~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~ 199 (381)
. .+ ...+...+.|+|.+....+..++++|..|+|+|+++.++......+|.+++..+.+.+.+.++.. |.
T Consensus 83 ~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~-----rL 157 (403)
T PF03209_consen 83 GPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPE-----RL 157 (403)
T ss_pred cccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHH-----HH
Confidence 1 12 34455667799999999999999999999999999999999999999999999999888876543 33
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcccchhhHHHh-hhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHH
Q psy8365 200 LGIVLLLAGMTCVLSLLCSLLLGCMDKRAERIL-NRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQE 278 (381)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (381)
...+...+.+..++.+ +..+..+++.++.. .+++++.+....++++.. +|+...+....+.....++.-...+-+
T Consensus 158 ~~v~~~~a~i~~~l~~---ia~wg~E~r~~~~~~~~~~~~~~f~~a~~~~~~-~~~a~~f~~fl~l~t~a~~~QD~iLEP 233 (403)
T PF03209_consen 158 IQVIQGVALIALLLNL---IALWGQEPRRSRRAAAAERPRPPFREAWRQVWA-SPQARRFFVFLFLGTLAFFMQDVILEP 233 (403)
T ss_pred HHHHHHHHHHHHHHHH---HHHHhcccCCcccccCCCCCCccHHHHHHHHHh-CCChhHHHHHHHHHHHHHHhhHHHcCC
Confidence 2233333333322222 22222233322222 122222333445666666 777777777777777777777777888
Q ss_pred HHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHh-hcchHHHHHHHHHHHHHHHHHHhh-----ccchhHHHHHHHH
Q psy8365 279 LFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDK-TGRNLFWVFISLMVSIVCHFMVGH-----TMIDPHITMVMMG 352 (381)
Q Consensus 279 ~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g 352 (381)
|--+.+|++..+...+......+..++-...|++..| .++++. ...++..++.++..+.. +.+.....++++|
T Consensus 234 ygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~-a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G 312 (403)
T PF03209_consen 234 YGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRT-AALGCLLGALAFALIILAGPLGSPWLFRPGVFLLG 312 (403)
T ss_pred chhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHH-HHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 8999999999999999999999999999988988774 444444 44455444455544333 3445567788899
Q ss_pred HHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 353 IAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
++.+.+.....+...+..++++.|..+|
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG 340 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMG 340 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHH
Confidence 9999988888888889988888887665
No 111
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.79 E-value=4.4e-17 Score=149.01 Aligned_cols=305 Identities=14% Similarity=0.130 Sum_probs=213.4
Q ss_pred HHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHH-HHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhh
Q psy8365 69 AQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVV-IGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQ 147 (381)
Q Consensus 69 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 147 (381)
+..++..++..+..++..|+.|.++|+ -|+||.++......+ +.+..+.+. -.++++...+..++.-++.+...+..
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~-~~~Rk~~l~~~~~~~~~~~~~l~~v-~~~~~~~~~~l~iia~v~~~~~~vfy 147 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADY-GGRRKRFLLIFTLLGVLATALLWFV-SPGQWWLALVLFIIANVGYEASNVFY 147 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcc-cccchHHHHHHHHHHHHHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 446788899999999999999999999 998887666544443 344433332 23455555666666677878888999
Q ss_pred hhhhhhcccCCcc--------------------------hHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcc--ccccchh
Q psy8365 148 NSYAVLWFKGKEL--------------------------NMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKF--GLIGYQT 199 (381)
Q Consensus 148 ~~~i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~--~~~gWr~ 199 (381)
++++.|..+++++ ++..+.-.....+|.++.-.+.-.+....+.. ...+-|.
T Consensus 148 na~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~ 227 (477)
T PF11700_consen 148 NAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRV 227 (477)
T ss_pred HHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhH
Confidence 9999999999888 89999988888899988777666554433322 1012354
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhccc-----CcccccccccccccCcchhhHHHHHHHhhhhhhcchh
Q psy8365 200 LGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNA-----GETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVS 274 (381)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (381)
.+...++...+.++......+.+ +.++..++.++ -++-...+|++++ .|......+..++..-+...+..
T Consensus 228 --~~~~~a~ww~vfsiP~~~~~~~~--~~~~~~~~~~~~~~~g~~~l~~t~k~~~~-~~~~~~fLia~~l~~dg~~ti~~ 302 (477)
T PF11700_consen 228 --AFLIVALWWLVFSIPLFLWLPDR--PGPRPLPSGSSYLRFGFKRLWRTFKEIRK-LRQLFLFLIAYFLYSDGVNTIIS 302 (477)
T ss_pred --HHHHHHHHHHHHHHHHHHhCCCC--CCCCCCCcchhHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHH
Confidence 45555554444554443332211 11010000000 0111234455556 68888889999999999999999
Q ss_pred hHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcch--HHHHHHHHHHHHHHHHHHh---------hccch
Q psy8365 275 LAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRN--LFWVFISLMVSIVCHFMVG---------HTMID 343 (381)
Q Consensus 275 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r--~~~~~~~~~~~~~~~~~~~---------~~~~~ 343 (381)
....|..+.+|++..+...+.....+.+++|+++.|++.||+|.| +.+........++++.... .+.+.
T Consensus 303 ~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~ 382 (477)
T PF11700_consen 303 FAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWE 382 (477)
T ss_pred HHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHH
Confidence 999999999999999999999999999999999999999999987 5544433333333333222 24456
Q ss_pred hHHHHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 344 PHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 344 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
.++..++.|+..+...+...++.+|+.|+++.+..+|
T Consensus 383 f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFg 419 (477)
T PF11700_consen 383 FWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFG 419 (477)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHH
Confidence 7777788899999999999999999999998877655
No 112
>PRK11462 putative transporter; Provisional
Probab=99.78 E-value=6e-17 Score=149.35 Aligned_cols=305 Identities=9% Similarity=0.046 Sum_probs=189.6
Q ss_pred hHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhh---hcCchhhhHH-HHHHHHHHHHHHHhhhc-cc--hhHH
Q psy8365 56 LEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDR---VFGIRMGSTI-YSVLVVIGQLVFALGAY-VD--SLFI 128 (381)
Q Consensus 56 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr---~~G~r~~~~~-~~~~~~~~~~~~~~~~~-~~--~~~~ 128 (381)
+...+.+..|+++..+|.+..+.-+-.++..|+.|.++|| .+||||..++ +.+..+++.+++...+. ++ ....
T Consensus 32 l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y 111 (460)
T PRK11462 32 MMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIY 111 (460)
T ss_pred HHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 3456778889999999999999999999999999999995 1688876665 55666666655443210 11 1445
Q ss_pred HHHHHHHHhccchhhhhhhhhhhhhccc-CCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcc-ccccchhhHHHHHH
Q psy8365 129 TILGRFIFGIGGESLAVAQNSYAVLWFK-GKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKF-GLIGYQTLGIVLLL 206 (381)
Q Consensus 129 l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~-~~~gWr~~~~~~~~ 206 (381)
+.+..++..++......+-.++.+|..+ +|||++..++...+.++|..+++.+...+.+..+.. ...+|+. ...+.
T Consensus 112 ~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~--~~~i~ 189 (460)
T PRK11462 112 AAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQG--GIAVL 189 (460)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH--HHHHH
Confidence 6667777788888888888899999986 689999999999999999999888877776665422 1125665 33333
Q ss_pred HHHHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCC
Q psy8365 207 AGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNL 286 (381)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 286 (381)
++ +++++........++.++ +++++.+.+...+..++ ||.++.+....++..............|.+...|.
T Consensus 190 ~i----i~~i~~~i~~~~~kE~~~---~~~~~~~~~~~l~~~~~-Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~ 261 (460)
T PRK11462 190 SV----VAFMMLAFCFFTTKERVE---APPTTTSMREDLRDIWQ-NDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT 261 (460)
T ss_pred HH----HHHHHHHHHHhcceeccC---CCccCCCHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC
Confidence 32 222222222221222111 11111112233455566 67777666555555544444444444444444443
Q ss_pred ChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhccc---hhHHHHHHHHHHHHhhhcchh
Q psy8365 287 DSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMI---DPHITMVMMGIAYSMVASGLW 363 (381)
Q Consensus 287 ~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~ 363 (381)
+ ...+.+.....++++++.++++++.||++||+..........+....+...+.. ...+..++.+++.+...+..+
T Consensus 262 ~-~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~ 340 (460)
T PRK11462 262 P-EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQW 340 (460)
T ss_pred h-HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 334455667778888899999999999999887554433333333333222222 123333445666655566667
Q ss_pred hhhhhccc
Q psy8365 364 PLIALVIP 371 (381)
Q Consensus 364 ~~~~~~~p 371 (381)
++.+|..+
T Consensus 341 ~m~ad~~d 348 (460)
T PRK11462 341 VMMSDTVD 348 (460)
T ss_pred HHHHHhHh
Confidence 77787766
No 113
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.78 E-value=2.4e-17 Score=146.77 Aligned_cols=306 Identities=12% Similarity=0.100 Sum_probs=216.6
Q ss_pred HHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhh---cCchhhhH-HHHHHHHHHHHHHHhhhc---cchhHHHH
Q psy8365 58 EHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRV---FGIRMGST-IYSVLVVIGQLVFALGAY---VDSLFITI 130 (381)
Q Consensus 58 ~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~---~G~r~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~l~ 130 (381)
-.+.+.+|+++..+|.+..+.-+-.++..|+.|.++||- +||||..+ .+.+..++...++....- ..+....+
T Consensus 37 ~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~ 116 (467)
T COG2211 37 FFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYAL 116 (467)
T ss_pred HHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHH
Confidence 456778899999999999999999999999999999950 67766554 455777777776655321 13566677
Q ss_pred HHHHHHhccchhhhhhhhhhhhhccc-CCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccc-cccchhhHHHHHHHH
Q psy8365 131 LGRFIFGIGGESLAVAQNSYAVLWFK-GKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFG-LIGYQTLGIVLLLAG 208 (381)
Q Consensus 131 ~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~-~~gWr~~~~~~~~~~ 208 (381)
+...+.+++......+..++.++..+ ++||.+..+.-+.+.++|..+...+...+....+..+ -.||+. ...
T Consensus 117 vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~--~~~---- 190 (467)
T COG2211 117 VTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQG--TAL---- 190 (467)
T ss_pred HHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHH--HHH----
Confidence 88889999999999999999999984 5799999999999999999988888888887776542 235555 222
Q ss_pred HHHHHHHHHHHhhcccchhhHHHhhhcccCcccccccc----cccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhc
Q psy8365 209 MTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVARLS----DVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRF 284 (381)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (381)
+.++++++..++..+..+|+.. +.++.+++.+.+++ ..++ ||++....+..++.....+...+....|.+...
T Consensus 191 ~~~vi~~i~~l~~~~~v~ER~~--~~~~~~~~~~~~~~~~~~~~~~-Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~l 267 (467)
T COG2211 191 VLGVIGVILLLFCFFNVKERVV--ETQPTKTGVKLKLKDSFLLIFK-NRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVL 267 (467)
T ss_pred HHHHHHHHHHHHHHHHhhcccC--ccccCcccccccHHHHHHHHHc-cchHHHHHHHHHHHHHHHHHHhhhhheeEEEEc
Confidence 2333444433333322222211 11111111233333 4556 788888888888888887777777788888888
Q ss_pred CCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhccc---hhHHHHHHHHHHHHhhhcc
Q psy8365 285 NLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMI---DPHITMVMMGIAYSMVASG 361 (381)
Q Consensus 285 g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~ 361 (381)
|.+...............+++.++..++.+|+|||+.......+..+....++..... ...+..++.+++.+...+.
T Consensus 268 g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l 347 (467)
T COG2211 268 GDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPL 347 (467)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccc
Confidence 8888888777777778878889999999999999999666655555444444443322 2223345667788888899
Q ss_pred hhhhhhhcccC
Q psy8365 362 LWPLIALVIPE 372 (381)
Q Consensus 362 ~~~~~~~~~p~ 372 (381)
.|++.+|..+-
T Consensus 348 ~wam~~d~vDy 358 (467)
T COG2211 348 PWAMVADTVDY 358 (467)
T ss_pred cHHHhcchhhH
Confidence 99999998764
No 114
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.78 E-value=1.4e-17 Score=146.72 Aligned_cols=320 Identities=13% Similarity=0.192 Sum_probs=192.2
Q ss_pred HHhhhhhhcCchhhHHHHH-hhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHH--HHHHHH-H
Q psy8365 43 GFGSYFCYDNPSSLEEHFT-TDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVV--IGQLVF-A 118 (381)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~--~~~~~~-~ 118 (381)
++..++.+...-+..+... ++.|+|.+++|.+.++..+...+.+++.|.++|| +|.||-++....... .+.... .
T Consensus 16 ~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dk-lg~kK~Ll~~i~~l~~l~~pff~~v 94 (412)
T PF01306_consen 16 YFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDK-LGLKKHLLWFIAILLLLFGPFFIYV 94 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHH-CTTCSHHHHHHHHHHHTCHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcch-hhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444555555555544 4589999999999999999999999999999999 998876554433222 222221 1
Q ss_pred hhhc-cchh-HHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcccccc
Q psy8365 119 LGAY-VDSL-FITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIG 196 (381)
Q Consensus 119 ~~~~-~~~~-~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~g 196 (381)
..+. ..|+ ...+++-+..|+......+...+++.++. ++.+.-.|-.-+..++|.+++..++|.+.+..+.
T Consensus 95 ~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~----- 167 (412)
T PF01306_consen 95 FGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNINPN----- 167 (412)
T ss_dssp HHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeeeCcc-----
Confidence 1111 1232 23344444456666666677777777665 3445556667778899999999999999875432
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhcccchhhH-HHhhhcccCcccccccc---cccccCcchhhHHHHHHHhhhhhhcc
Q psy8365 197 YQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAE-RILNRRNAGETEVARLS---DVKHFPVSFWMVVVIIVSYYTSIFPF 272 (381)
Q Consensus 197 Wr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (381)
. .+++... ..++..+ +.+..++++++ ....+++..++++.+.+ +++| +|++|.+.+........+..+
T Consensus 168 --~--~fwi~s~-~~~il~l--ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k-~~~fw~~~l~v~g~~~~Y~vf 239 (412)
T PF01306_consen 168 --I--IFWIASA-AAIILLL--LLLLLKPDVPPQAEVADALGAKKDKVSLKDVLSLFK-MRNFWFFVLFVIGVAAIYDVF 239 (412)
T ss_dssp --H--HHHHHHH-HHHHHHH--HHHSS---SSSSS-SSTTSSS------HHHHHHHTT-SHHHHHHHHHHHHHHHHHHHH
T ss_pred --H--HHHHHHH-HHHHHHH--HHHHcCCcCchhhhhhcccccCCCCCcHHHHHHHhc-chhHHHHHHHHHHHHHHHHHH
Confidence 1 3443322 2222211 11212211111 11111122223333334 4555 799999888777777777777
Q ss_pred hhhHHHHHHHhcC---CChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh--ccchhHHH
Q psy8365 273 VSLAQELFVKRFN---LDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH--TMIDPHIT 347 (381)
Q Consensus 273 ~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 347 (381)
....+.|+...++ .+....|.+.+...+..++.-.+.+++.+|+|.|+.+++.+.++. +=.....+ +++.....
T Consensus 240 dqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~-iRi~~~~~~~~~~~i~~~ 318 (412)
T PF01306_consen 240 DQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMA-IRIIGSGFATNPWVISLI 318 (412)
T ss_dssp HHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-HHHHHHHT--SHHHHHHH
T ss_pred HHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHH-HHHHHHhhhcchHHHHHH
Confidence 7777888876433 234567788888888888888899999999999999776665544 44444444 22333334
Q ss_pred HHHHHHHHHhhhcchhhhhhhcccCCcccccc
Q psy8365 348 MVMMGIAYSMVASGLWPLIALVIPEYQLGTAY 379 (381)
Q Consensus 348 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~ 379 (381)
-.+-++-+.+......-++.+.+|+|..++.+
T Consensus 319 klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y 350 (412)
T PF01306_consen 319 KLLHALEFPLLLVAAFKYITAHFDKRLSATLY 350 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHH
Confidence 45667777777777788999999998877654
No 115
>KOG2325|consensus
Probab=99.74 E-value=1.2e-16 Score=142.55 Aligned_cols=158 Identities=13% Similarity=0.112 Sum_probs=127.3
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhcCchhhH-HHHHh-hhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCc-hhhhH
Q psy8365 28 HNIQRVLALLLMCLLGFGSYFCYDNPSSLE-EHFTT-DMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGI-RMGST 104 (381)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~-r~~~~ 104 (381)
.++.+|+.+.+..+..++.....+.+.+.. |++++ |.+.+.+..|++.++..++.+++++..|++..| .+. |+.++
T Consensus 28 ~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k-~~~~k~Pli 106 (488)
T KOG2325|consen 28 ERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNK-TGSVKKPLI 106 (488)
T ss_pred ccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccc-cCCcccCHH
Confidence 344567777777777777777776655444 44443 477788889999999999999999999999999 886 88999
Q ss_pred HHHHHHHHHHHHH-Hhhhccc-hhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhh
Q psy8365 105 IYSVLVVIGQLVF-ALGAYVD-SLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVA 182 (381)
Q Consensus 105 ~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 182 (381)
.+.++..+|.++. ++.-..+ .-+.++++|++.|+| .+......+|+++....++|.++++....+..+|.++||.+.
T Consensus 107 ~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg-~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q 185 (488)
T KOG2325|consen 107 VSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVG-VGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQ 185 (488)
T ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcC-cccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHH
Confidence 9999999999988 4433344 688899999999999 445566778999888889999999999999999999999887
Q ss_pred HHHHh
Q psy8365 183 EPLYK 187 (381)
Q Consensus 183 ~~l~~ 187 (381)
..+..
T Consensus 186 ~~f~~ 190 (488)
T KOG2325|consen 186 LAFTP 190 (488)
T ss_pred HHHhh
Confidence 66543
No 116
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.72 E-value=6e-16 Score=133.74 Aligned_cols=304 Identities=13% Similarity=0.115 Sum_probs=210.4
Q ss_pred hHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHH-HHHHHHHhhhccc--hhHHHHHHHHHHhccchhhh
Q psy8365 68 NAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVV-IGQLVFALGAYVD--SLFITILGRFIFGIGGESLA 144 (381)
Q Consensus 68 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~ 144 (381)
.+..+...++..+..++.+|+-|.++|+ .|+||.......... ++...+.+. .+ .++..++...+..++.....
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~-~g~Rk~~~~~f~~i~i~~~~~L~~i--~~~s~~~~~l~~~il~~i~~~~s~ 133 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADY-PGPRKKFFGFFTAIGIISTFLLWFI--PPGSYLLLLLLFLILASIGFEFSN 133 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhcc-CCCcchHHHHHHHHHHHHHHHHHHh--CCCchHHHHHHHHHHHHHhcchhh
Confidence 4557888899999999999999999999 998876655444333 333333331 23 45555666777899989999
Q ss_pred hhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcc------------ccccchhhHHHHHHHHHHHH
Q psy8365 145 VAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKF------------GLIGYQTLGIVLLLAGMTCV 212 (381)
Q Consensus 145 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~------------~~~gWr~~~~~~~~~~~~~~ 212 (381)
+...+++.+..++++-++..++-.....+|..+.-+.........+.. .-..=|. .+.+.++-..+
T Consensus 134 Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri--~~~l~A~W~li 211 (438)
T COG2270 134 VFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRI--TGLLAALWWLL 211 (438)
T ss_pred eehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchh--HHHHHHHHHHH
Confidence 999999999999988888887777777777776554432222111000 0012343 33333333333
Q ss_pred HHHHHHHhhcccchhhHHHhhhc-----ccCcccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCC
Q psy8365 213 LSLLCSLLLGCMDKRAERILNRR-----NAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLD 287 (381)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 287 (381)
..+..+. ..++.+ +..++. +.-++-..++++.++ ++.+....+..++..-+.+........|-...+|++
T Consensus 212 ~~iPm~~---~v~~~~-~~~~~~~~~l~~g~k~L~~t~k~i~~-~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls 286 (438)
T COG2270 212 FALPMIL---NVHDAE-KISSPPPTALRNGFKELKSTFKEIRG-RKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLS 286 (438)
T ss_pred HHhHHHh---cccccc-cccccchHHHHHHHHHHHHHHHHHhc-ccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCcc
Confidence 3322221 111111 110000 011122345667777 678888899999999898999999999999899999
Q ss_pred hhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh-ccchhHHHHHHHHHHHHhhhcchhhhh
Q psy8365 288 SDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH-TMIDPHITMVMMGIAYSMVASGLWPLI 366 (381)
Q Consensus 288 ~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~ 366 (381)
..+...+.....+.+++++++.|++.||+|.|++++.......+.++..+.. .....++.-.+.|...+.......++.
T Consensus 287 ~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~ 366 (438)
T COG2270 287 STELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYL 366 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 9999999999999999999999999999998888666666666566555444 344556666788999999999999999
Q ss_pred hhcccCCcccccccC
Q psy8365 367 ALVIPEYQLGTAYGM 381 (381)
Q Consensus 367 ~~~~p~~~~g~~~g~ 381 (381)
.+.+|+++.++..|+
T Consensus 367 ~~lvp~~k~~~fFgl 381 (438)
T COG2270 367 ARLVPKGKEGRFFGL 381 (438)
T ss_pred HHhCCCccccceeeh
Confidence 999999998888764
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.72 E-value=6e-16 Score=136.72 Aligned_cols=334 Identities=16% Similarity=0.155 Sum_probs=209.2
Q ss_pred HHHHHHHHHhhhhhhcCc-hhhHHHHHhhhc----CChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHH
Q psy8365 36 LLLMCLLGFGSYFCYDNP-SSLEEHFTTDMH----LTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLV 110 (381)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~ 110 (381)
+..++...+-.-++.+.+ .++.-++..+++ +++++..-+.++|..-.-+...++|+++||+.|+|+.+.++.+++
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~ 102 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILM 102 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 344555566666666444 344556666666 999998888888877777889999999999899999999999999
Q ss_pred HHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCC--cchHHHHHHHHHHhHhhHhhhhhhHHHHhh
Q psy8365 111 VIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGK--ELNMVFGFQLSLSRVGSTVNMFVAEPLYKY 188 (381)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (381)
.+|.++++..+ ..+...++++-.+.++|.|..-+...+++.|.+|++ +|-..++++.++.++|..++|++.+.+.++
T Consensus 103 ~iGh~~L~~~~-~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~ 181 (498)
T COG3104 103 AIGHLVLAISS-VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAIN 181 (498)
T ss_pred HHHHHHHhccc-cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHh
Confidence 99999887631 146888999999999999999999999999999865 477789999999999999999999999887
Q ss_pred hhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhh-----HHHhhhcccC-------------------cc----
Q psy8365 189 VEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRA-----ERILNRRNAG-------------------ET---- 240 (381)
Q Consensus 189 ~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-------------------~~---- 240 (381)
. ||.. -+..+++....+++............ +...+..+.. +.
T Consensus 182 ~------g~~~---gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 252 (498)
T COG3104 182 Y------GWHV---GFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFS 252 (498)
T ss_pred h------CHHH---HHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7 5776 44555556666665555433211100 0000000000 00
Q ss_pred ----------------cccccccccccCcchhhHHHHHHH---hhhhhhcchhhHHHHHHHh-----cCCChhhhhhhHH
Q psy8365 241 ----------------EVARLSDVKHFPVSFWMVVVIIVS---YYTSIFPFVSLAQELFVKR-----FNLDSDAANRLNS 296 (381)
Q Consensus 241 ----------------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~ 296 (381)
+...+++....+++.+..+..... ....+....+.+..|..+. +|++ ....+..+
T Consensus 253 ~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~-vp~~~fQs 331 (498)
T COG3104 253 GVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFE-VPPAWFQS 331 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhccccccee-cCHHHHHh
Confidence 000111111112344333222222 1222222222233333332 2221 33456677
Q ss_pred HHHHHHhhhhhhHHHHHHhhcch--H----HHHHHHHHHHHHHHHHHhh------------ccchhHHHHHHHHHHHHhh
Q psy8365 297 IVYTISAFLSPLMGLVVDKTGRN--L----FWVFISLMVSIVCHFMVGH------------TMIDPHITMVMMGIAYSMV 358 (381)
Q Consensus 297 ~~~~~~~i~~~~~g~l~dr~g~r--~----~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~g~~~~~~ 358 (381)
...+.-++.+++..++..|.+++ . .-...+..++..+++.+.. +.+..+...++.+++.-+.
T Consensus 332 lNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~i 411 (498)
T COG3104 332 LNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFI 411 (498)
T ss_pred hCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHh
Confidence 77777777888777777775432 1 1122333333333333322 1112334456677777788
Q ss_pred hcchhhhhhhcccCCccccccc
Q psy8365 359 ASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 359 ~~~~~~~~~~~~p~~~~g~~~g 380 (381)
.|...+++.+..|++..+.++|
T Consensus 412 SpvGLs~~t~laP~~~~s~~ma 433 (498)
T COG3104 412 SPVGLSMVTKLAPPALKSFIMA 433 (498)
T ss_pred CHHHHHHHHHhChHHHHHHHHH
Confidence 8999999999999987776654
No 118
>KOG3626|consensus
Probab=99.70 E-value=5.3e-16 Score=144.07 Aligned_cols=282 Identities=19% Similarity=0.202 Sum_probs=209.3
Q ss_pred HHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHH
Q psy8365 35 ALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQ 114 (381)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~ 114 (381)
.+.++++..+...+....+...+..+++.|+++.++.|++.+.+-++..+...+..+..-| ..|-|.+-++.+++++++
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r-~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSR-GHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccc-cCccceeeechhHHHHHH
Confidence 3455566667777777777888899999999999999999999999999999999999999 888889999999999999
Q ss_pred HHHHhhhcc-----------------------------------------------c--hhHHHHHHHHHHhccchhhhh
Q psy8365 115 LVFALGAYV-----------------------------------------------D--SLFITILGRFIFGIGGESLAV 145 (381)
Q Consensus 115 ~~~~~~~~~-----------------------------------------------~--~~~~l~~~r~l~G~~~~~~~~ 145 (381)
+++++--+. + -+..++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 987652000 0 123678899999999999999
Q ss_pred hhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcc-------ccccchhhHHHHHHHHHHHHHHHHHH
Q psy8365 146 AQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKF-------GLIGYQTLGIVLLLAGMTCVLSLLCS 218 (381)
Q Consensus 146 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~-------~~~gWr~~~~~~~~~~~~~~~~~~~~ 218 (381)
...+|+-|...+++-+..+|+......+|.++|.++++.+....... ...+-||.+..|.--.+...+.++..
T Consensus 257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987654222 11245665544433333333333333
Q ss_pred HhhcccchhhHH--------HhhhcccCc---ccc-----------cccccccccCcchhhHHHHHHHhhhhhhcchhhH
Q psy8365 219 LLLGCMDKRAER--------ILNRRNAGE---TEV-----------ARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLA 276 (381)
Q Consensus 219 ~~~~~~~~~~~~--------~~~~~~~~~---~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (381)
+.+++.+++.++ +.+..++++ ++. ...+.+++ ||.+....+...+....+.++.+++
T Consensus 337 ~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~-N~if~~~~l~~~~~~~~~~G~~tFl 415 (735)
T KOG3626|consen 337 VPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLS-NPIFMLVVLASVIESLAITGYITFL 415 (735)
T ss_pred HHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHhhHHHhh
Confidence 333332222111 111101110 011 11233344 7888999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhhHHHHHHH-HhhhhhhHHHHHHhhcc
Q psy8365 277 QELFVKRFNLDSDAANRLNSIVYTI-SAFLSPLMGLVVDKTGR 318 (381)
Q Consensus 277 ~~~~~~~~g~~~~~~~~~~~~~~~~-~~i~~~~~g~l~dr~g~ 318 (381)
|.|+++++|.+.+.+..+.+...+. ..+|..++|++.+|+.-
T Consensus 416 PKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl 458 (735)
T KOG3626|consen 416 PKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKL 458 (735)
T ss_pred HHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecc
Confidence 9999999999999999998776554 46677799999999863
No 119
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.67 E-value=6.4e-18 Score=156.60 Aligned_cols=277 Identities=18% Similarity=0.213 Sum_probs=3.0
Q ss_pred HHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHH
Q psy8365 38 LMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVF 117 (381)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~ 117 (381)
.+++..+.+..........++.++++|+++.++.|++.+.+-++..+..++..++.+| ..|-|.+-.+.+++++|++++
T Consensus 7 ~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~-~hrprwig~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGR-GHRPRWIGIGALLMGLGSLLF 85 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcceeeecHHHHHHHHHHH
Confidence 3444455555666677777889999999999999999999999999999999999999 888788888999999998877
Q ss_pred Hhhhcc-----------------------------------------------chhHHHHHHHHHHhccchhhhhhhhhh
Q psy8365 118 ALGAYV-----------------------------------------------DSLFITILGRFIFGIGGESLAVAQNSY 150 (381)
Q Consensus 118 ~~~~~~-----------------------------------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~ 150 (381)
++--+. .-+..++++.++.|+|....++...+|
T Consensus 86 ~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tY 165 (539)
T PF03137_consen 86 ALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITY 165 (539)
T ss_dssp ------------------------------------------------------------------SSS-----------
T ss_pred hccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeee
Confidence 641100 014568899999999999999999999
Q ss_pred hhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcc----------ccccchhhHHHHHHHHH-HHHHHHHHHH
Q psy8365 151 AVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKF----------GLIGYQTLGIVLLLAGM-TCVLSLLCSL 219 (381)
Q Consensus 151 i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~----------~~~gWr~~~~~~~~~~~-~~~~~~~~~~ 219 (381)
+-|..++++-+..+|+......+|.++|.++++.+.+.+-.. ...+-||.+.. +++.+ ...+.++..+
T Consensus 166 iDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAW-WLGfli~g~~~~l~ai 244 (539)
T PF03137_consen 166 IDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAW-WLGFLICGILLFLSAI 244 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHH-HHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999887542110 01134443332 22221 2222222222
Q ss_pred hh---cccchhhH-----HHhh--hcc----c--Cccc-----c-------cccccccccCcchhhHHHHHHHhhhhhhc
Q psy8365 220 LL---GCMDKRAE-----RILN--RRN----A--GETE-----V-------ARLSDVKHFPVSFWMVVVIIVSYYTSIFP 271 (381)
Q Consensus 220 ~~---~~~~~~~~-----~~~~--~~~----~--~~~~-----~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (381)
.+ +...|+.+ ++.+ +++ + ++++ . ...+++++ ||.+....+..........+
T Consensus 245 pl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~-Np~f~~~~la~~~~~~~~~G 323 (539)
T PF03137_consen 245 PLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLT-NPVFMCLILAGVFESFIVSG 323 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhc-ChHHHHHHHHHHHHHHHHHH
Confidence 22 11111110 0000 000 0 0000 0 11233344 78888888888899999999
Q ss_pred chhhHHHHHHHhcCCChhhhhhhHHHHHH-HHhhhhhhHHHHHHhhc
Q psy8365 272 FVSLAQELFVKRFNLDSDAANRLNSIVYT-ISAFLSPLMGLVVDKTG 317 (381)
Q Consensus 272 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~g 317 (381)
+.++.|.|++.+++.++.+++++.....+ ++++|.+++|++.+|++
T Consensus 324 ~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~k 370 (539)
T PF03137_consen 324 FATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFK 370 (539)
T ss_dssp -----------------------------------------------
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEec
Confidence 99999999999999999999998877655 56788889999999986
No 120
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.62 E-value=2e-13 Score=116.76 Aligned_cols=239 Identities=15% Similarity=0.091 Sum_probs=151.6
Q ss_pred HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhc
Q psy8365 59 HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGI 138 (381)
Q Consensus 59 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 138 (381)
.+-+++|.++.|++.+....+....+..++.|.++|| +|||+.-++.+++..++++... .++++.++++|++-|+
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~-~Grk~~cl~~cily~~scl~k~----~~~~~~L~~GRvlgGi 133 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADR-YGRKKACLLFCILYSLSCLTKH----SSNYPVLLLGRVLGGI 133 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHh----ccccHHHHHHHHHHHH
Confidence 3446899999999999999999999999999999999 9999999998888888876433 6899999999999999
Q ss_pred cchhhhhhhhhhhh-hcc----cCCcchHHHHHHH-HHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHH
Q psy8365 139 GGESLAVAQNSYAV-LWF----KGKELNMVFGFQL-SLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCV 212 (381)
Q Consensus 139 ~~~~~~~~~~~~i~-~~~----~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~~~~ 212 (381)
+....+.+-.++.. |.- |++..+..++... ..+++-.+.+.+++..+.+..+. |-.. .+..++...+
T Consensus 134 aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~----g~va---PF~~a~~~l~ 206 (354)
T PF05631_consen 134 ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGF----GPVA---PFDAAIVLLA 206 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCC----CCcc---hHHHHHHHHH
Confidence 99888888777665 432 2222233333222 22233334444444455554432 1122 4444444444
Q ss_pred HHHHHHHhhcccchhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcch-hhHHHHHHHhcCCChhhh
Q psy8365 213 LSLLCSLLLGCMDKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFV-SLAQELFVKRFNLDSDAA 291 (381)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~ 291 (381)
++.+.+... +.+...++. +..+..++-+..++.+++ +|+.+.+.+...+.-...+.+. .|.|. ++. +-+..--
T Consensus 207 ~~~~~I~~~-W~ENyg~~~-~~~~~~~~~~~a~~~i~~-d~ril~LG~~qslFE~smy~FVflWtPa-L~~--~~~~~P~ 280 (354)
T PF05631_consen 207 VAAVLILKT-WPENYGDTS-SSSSLSGSFREAWRAILS-DPRILLLGLIQSLFEGSMYLFVFLWTPA-LDP--DDEELPL 280 (354)
T ss_pred HHHHHHHhc-ccccCCCcc-cccchHHHHHHHHHHHHc-CchhHHHHHHHHHHHHHHHHheeeeece-ecC--CCCCCCc
Confidence 443322211 211111100 000111112233455555 7899998888888777766665 45665 431 1123457
Q ss_pred hhhHHHHHHHHhhhhhhHHHHHHh
Q psy8365 292 NRLNSIVYTISAFLSPLMGLVVDK 315 (381)
Q Consensus 292 ~~~~~~~~~~~~i~~~~~g~l~dr 315 (381)
|++.+...++.++|+.+..++..|
T Consensus 281 GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 281 GLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhC
Confidence 899999999999999888766554
No 121
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.59 E-value=1.4e-14 Score=132.26 Aligned_cols=153 Identities=15% Similarity=0.193 Sum_probs=119.2
Q ss_pred HHHHhhhcCC--------hHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhh-ccchhHH
Q psy8365 58 EHFTTDMHLT--------NAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGA-YVDSLFI 128 (381)
Q Consensus 58 ~~~~~~~~~s--------~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 128 (381)
+...++.|.+ .++.+...+...+...++.++.|++.|| +|+|+++..+.++..++..+..... ...+++.
T Consensus 232 ~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr-~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~ 310 (418)
T TIGR00889 232 NGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKR-FGIKKVMLLSLVAWALRFGFFAYGDPEYFGYAL 310 (418)
T ss_pred HHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHH
Confidence 4445566544 3667999999999999999999999999 9999999999988877765554410 0113566
Q ss_pred HHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHH-HHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHH
Q psy8365 129 TILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQL-SLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLA 207 (381)
Q Consensus 129 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~ 207 (381)
+++.+++.|++.+...+....++.|++|+++|+++.|+.+ ....+|..+||.+++.+.++.+.....|||. .+...+
T Consensus 311 l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~--~f~~~~ 388 (418)
T TIGR00889 311 LFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQT--MWLFFA 388 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHH--HHHHHH
Confidence 7888999999988888998999999999999999999997 6788999999999999999876421116998 555544
Q ss_pred HHHHHH
Q psy8365 208 GMTCVL 213 (381)
Q Consensus 208 ~~~~~~ 213 (381)
+...+.
T Consensus 389 ~~~~i~ 394 (418)
T TIGR00889 389 GYIAIL 394 (418)
T ss_pred HHHHHH
Confidence 433333
No 122
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.56 E-value=6.5e-14 Score=127.94 Aligned_cols=130 Identities=15% Similarity=0.111 Sum_probs=111.3
Q ss_pred hHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q psy8365 56 LEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFI 135 (381)
Q Consensus 56 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 135 (381)
..|.+.++.|.++.+.+.+.+...++..++.++.|++.|| +|||+.+..+.+...++.+.... .++.+.+.+..++
T Consensus 242 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 317 (406)
T PRK11551 242 WLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDR-LRPRRVVLLIYAGILASLAALAA---APSFAGMLLAGFA 317 (406)
T ss_pred HHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHh---cCcHHHHHHHHHH
Confidence 3567777889999999999999999999999999999999 99999988766655555443333 5677777778888
Q ss_pred HhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 136 FGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 136 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
.|++.+...+...++..|.+|+++|++..|+.+....+|..++|.+.+.+.++.
T Consensus 318 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 371 (406)
T PRK11551 318 AGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG 371 (406)
T ss_pred HHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC
Confidence 888877888888899999999999999999999999999999999999998754
No 123
>KOG2816|consensus
Probab=99.55 E-value=6.4e-13 Score=120.51 Aligned_cols=325 Identities=13% Similarity=0.124 Sum_probs=200.6
Q ss_pred HHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChH-HHHHHHHH----hhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHH
Q psy8365 36 LLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNA-QYMNLYSW----YSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLV 110 (381)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~g~~~s~----~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~ 110 (381)
....++-.+...+.........+......+.+.. ..+..... ..+...+.++..|.++|| +|||..+.......
T Consensus 24 ~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~-~grk~~L~~~~~~~ 102 (463)
T KOG2816|consen 24 EPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDR-YGRKVVLLLPLFGT 102 (463)
T ss_pred HHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhh-hhhhhhHHHHHHHH
Confidence 3334444444455554444555555544443222 22222232 356777889999999999 99999999998888
Q ss_pred HHHHHHHHhhhccchhHHHHHHHHHHhccc--hhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhh
Q psy8365 111 VIGQLVFALGAYVDSLFITILGRFIFGIGG--ESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKY 188 (381)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~--~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (381)
.+..+...+ +.+|.++ +.|+.. +.......++++|....++|....|+.+.....+..++|.+++.+.+.
T Consensus 103 ~l~~~~~~~----~~~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~ 174 (463)
T KOG2816|consen 103 ILPALCLLF----QGYWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF 174 (463)
T ss_pred HHhHHHHHH----HHHHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 888776665 3344433 444432 455567889999999999999999999999999999999999999887
Q ss_pred hhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhh-h--------cccCcccccccccc--cccCcchhh
Q psy8365 189 VEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILN-R--------RNAGETEVARLSDV--KHFPVSFWM 257 (381)
Q Consensus 189 ~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~--~~~~~~~~~ 257 (381)
.+.. ..+.++....+...+...... .++..++..+ . +.........++.. .+.+|..+.
T Consensus 175 ~~~a---------~~f~ia~~~~~~~~~y~~~~l-~Esl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~ 244 (463)
T KOG2816|consen 175 LGIA---------LVFLIAAASGILSLLYMLLFL-PESLQEKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLL 244 (463)
T ss_pred cCch---------HHHHHHHHHHHHHHHHHhhcc-ccccCccccccccccccCCCcccchhhhhhhhhhcccCCCccchH
Confidence 6533 244444444444444333221 1111111111 0 00000001111111 112566666
Q ss_pred HHHHHHHhhhhhhcchh-hHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHH-HHHHhhcchHHHHHHHHHHHHHHHH
Q psy8365 258 VVVIIVSYYTSIFPFVS-LAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMG-LVVDKTGRNLFWVFISLMVSIVCHF 335 (381)
Q Consensus 258 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g-~l~dr~g~r~~~~~~~~~~~~~~~~ 335 (381)
+.+..+........-.. ..+.|+...++++..+.+.+.+.......++..+.. .+...++.|+ .+..+...-.....
T Consensus 245 l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~-~i~lGl~~~~~~~~ 323 (463)
T KOG2816|consen 245 LLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKR-LISLGLLSEFLQLL 323 (463)
T ss_pred HHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-HhhHHHHHHHHHHH
Confidence 66655555544432222 335567778999999999999999998888888766 6677777777 46666666666666
Q ss_pred HHhh--ccchhHHHHHHHHHHHHhhhcchhhhhhhcccCCcccccccC
Q psy8365 336 MVGH--TMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 336 ~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
+..+ ..|..+... ..........|...+..+...+++++|++.++
T Consensus 324 ~~af~~~~w~~~~~~-v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~ 370 (463)
T KOG2816|consen 324 LFAFATETWMMFAAG-VVVALAGIVFPAIRAFASILVSPEEQGKVFGI 370 (463)
T ss_pred HHHHhccchhhhHHH-HHHHhhcchhHHHHhHHHhhcccccccchhhH
Confidence 6555 333333333 33444444677888999999999999998763
No 124
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.55 E-value=7.3e-14 Score=128.09 Aligned_cols=135 Identities=16% Similarity=0.234 Sum_probs=113.4
Q ss_pred hcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhh
Q psy8365 64 MHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESL 143 (381)
Q Consensus 64 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 143 (381)
.+.+..+.|++.++..++..++.+++|++.|| +|+|+.+..+.++.+++.++..+ +++.+.+++.+++.|++.+..
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~l~~~~~~l~~~---~~~~~~~~~~~~l~g~~~~~~ 332 (420)
T PRK09528 257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINR-IGAKNALLLAGTIMAVRIIGSGF---ATGPLEVSILKLLHAFEVPFL 332 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcchhhHHHHHHHHHHHHHHHh---cccHHHHHHHHHHHHHHHHHH
Confidence 36677889999999999999999999999999 99999999888888777665554 688899999999999998888
Q ss_pred hhhhhhhhhhcccCCcchHHHHH-HHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHHHH
Q psy8365 144 AVAQNSYAVLWFKGKELNMVFGF-QLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMT 210 (381)
Q Consensus 144 ~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~~ 210 (381)
.+....++.|.+|++.|+...+. ++....+|.++++.+.+.+.+.. |||. .+...+++.
T Consensus 333 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~------G~~~--~f~~~~~~~ 392 (420)
T PRK09528 333 LVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI------GFQG--TYLILGGIV 392 (420)
T ss_pred HHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh------CchH--HHHHHHHHH
Confidence 88888999999999999887655 66778899999999999998876 6887 555555433
No 125
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.54 E-value=1.4e-13 Score=124.22 Aligned_cols=134 Identities=13% Similarity=0.065 Sum_probs=112.6
Q ss_pred hHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccch--hHHHHHHH
Q psy8365 56 LEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDS--LFITILGR 133 (381)
Q Consensus 56 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~r 133 (381)
..+.+.+++|.++.+.+++.+...++..++.++.|++.|| +|||+.+..+..+..++.++... .++ ...++...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 302 (377)
T TIGR00890 227 LYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDK-IGRQKTMSIVFGISAVGMAAMLF---IPMLNDVLFLATV 302 (377)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHHHHH---cccchhHHHHHHH
Confidence 3455667889999999999999999999999999999999 99999999888888777665544 332 23345667
Q ss_pred HHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchh
Q psy8365 134 FIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQT 199 (381)
Q Consensus 134 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~ 199 (381)
++.|++.+...+....++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+.. ||++
T Consensus 303 ~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~------g~~~ 362 (377)
T TIGR00890 303 ALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI------GFEY 362 (377)
T ss_pred HHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh------chhh
Confidence 78888877777778889999999999999999999999999999999999998765 6887
No 126
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.54 E-value=6.5e-13 Score=120.64 Aligned_cols=130 Identities=15% Similarity=0.057 Sum_probs=106.6
Q ss_pred HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhc
Q psy8365 59 HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGI 138 (381)
Q Consensus 59 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 138 (381)
.+++++|.++.+.+++.+...+...++.++.|+++|| +|||+.+..+.....+...... ..++.+.+++.+++.++
T Consensus 242 ~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr-~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~l~~~ 317 (393)
T PRK15011 242 FIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKR-LGKRFLMRVAAVAGVCFYAGML---MAHSPAILLGLQLLNAI 317 (393)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHH
Confidence 4567889999999998888778888899999999999 9999988776655444433222 25678888889998888
Q ss_pred cchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchh
Q psy8365 139 GGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQT 199 (381)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~ 199 (381)
+.+...+....+..|.+| ++|+++.++++...++|..+++.+++.+.++. ||+.
T Consensus 318 ~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~------g~~~ 371 (393)
T PRK15011 318 YIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIW------NYHA 371 (393)
T ss_pred HHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh------hhHH
Confidence 877777777788889888 56999999999999999999999999998876 5777
No 127
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.52 E-value=7.9e-13 Score=119.62 Aligned_cols=133 Identities=10% Similarity=-0.009 Sum_probs=118.0
Q ss_pred chhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHH
Q psy8365 53 PSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILG 132 (381)
Q Consensus 53 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 132 (381)
.....|.+.+|+|.++.++|.+.+...++..+..++.+++.|| +|+|+.+.++.+...+....... +++.+.+++.
T Consensus 224 ~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r-~g~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~ 299 (382)
T TIGR00902 224 YYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQN-CSARDLLLISAIACVGRWAIIGA---IEAFPLIFLL 299 (382)
T ss_pred HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhh-CCHHHHHHHHHHHHHHHHHHHHh---HhhHHHHHHH
Confidence 3334455557799999999999999999999999999999999 99999999999998888776654 7899999999
Q ss_pred HHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHH-HHHhHhhHhhhhhhHHHHhhhh
Q psy8365 133 RFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQL-SLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 133 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
++++|+..+...+....++.+. |+++|++..++++ ...++|..+++.++|.+.++.+
T Consensus 300 q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g 357 (382)
T TIGR00902 300 QILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG 357 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999998 9899999999986 5678999999999999999874
No 128
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.51 E-value=3.5e-13 Score=123.54 Aligned_cols=149 Identities=12% Similarity=0.080 Sum_probs=120.3
Q ss_pred hHHHHHhh-hcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q psy8365 56 LEEHFTTD-MHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRF 134 (381)
Q Consensus 56 ~~~~~~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 134 (381)
..|.+.++ +|.++.+.|++.+...++..++.++.+++.|| .++|+.+..+..+.+++.++... .++.+...+..+
T Consensus 245 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~-~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 320 (417)
T PRK10489 245 LYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHS-ARPGLLMLLSTLGSFLAVGLFGL---MPMWILAVLCLA 320 (417)
T ss_pred hhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhc-cCcchHHHHHHHHHHHHHHHHHc---cchHHHHHHHHH
Confidence 34555555 89999999999999999999999999999999 88888888887777766655443 677777888889
Q ss_pred HHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHH
Q psy8365 135 IFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLS 214 (381)
Q Consensus 135 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~ 214 (381)
+.|++.+...+...+++.|..|++.||++++++.....+|..+|+.+.+.+.+..+ ++. .+...+++..+++
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g------~~~--~~~~~~~~~~~~~ 392 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT------PVA--SASASGFGLLIIG 392 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc------hhh--HHHHHHHHHHHHH
Confidence 99998877777888899999999999999999999999999999999999998764 444 4544544443433
Q ss_pred HH
Q psy8365 215 LL 216 (381)
Q Consensus 215 ~~ 216 (381)
++
T Consensus 393 ~~ 394 (417)
T PRK10489 393 VL 394 (417)
T ss_pred HH
Confidence 33
No 129
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.51 E-value=9.2e-14 Score=106.74 Aligned_cols=120 Identities=23% Similarity=0.368 Sum_probs=104.0
Q ss_pred HHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcc
Q psy8365 76 SWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWF 155 (381)
Q Consensus 76 s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 155 (381)
+.+.++..+++++.|++.|| +|||+.+..+.....++.+.... .++++.+.+.+++.|++.+...+....++.|.+
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~-~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDR-FGRKPVLLVGLFIFVLSTAMFAL---SSNITVLIIARFLQGFGAAFALVAGAALIADIY 80 (141)
T ss_pred EeehhHHHHHHhhHHHHHhh-cchhHHHHHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC
Confidence 45567888999999999999 99999999998888877776554 688999999999999999999999999999999
Q ss_pred cCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHH
Q psy8365 156 KGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLA 207 (381)
Q Consensus 156 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~ 207 (381)
|+++|++..++.+....+|..+++.+.+.+.+.. +||+ .++..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~~~--~~~~~~ 124 (141)
T TIGR00880 81 PPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL------GWRA--PFLFLA 124 (141)
T ss_pred ChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc------chHH--HHHHHH
Confidence 9999999999999999999999999999887654 6887 444443
No 130
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.51 E-value=5.7e-13 Score=123.15 Aligned_cols=151 Identities=10% Similarity=0.067 Sum_probs=116.2
Q ss_pred hhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcC--chhhhHHHH--HHHHHHHHHHHhhhc
Q psy8365 47 YFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFG--IRMGSTIYS--VLVVIGQLVFALGAY 122 (381)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G--~r~~~~~~~--~~~~~~~~~~~~~~~ 122 (381)
...........|.+.+++|.++.+.+++.+...++..+++++.|+++|| .. +|+...++. +...++.+++. .
T Consensus 254 ~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~l~~ll~~---~ 329 (455)
T TIGR00892 254 FLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGL-KWIRPHVQYLFSFALLFNGLTHLLCA---L 329 (455)
T ss_pred HHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHHHHH---H
Confidence 3333344445566667889999999999999999999999999999997 53 333333322 22223333222 3
Q ss_pred cchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHH
Q psy8365 123 VDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGI 202 (381)
Q Consensus 123 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~ 202 (381)
.++++.+++.+++.|++.+...+...+++.|.+|++++++.+++++....+|..+||.+++.+.+..+ +|++ .
T Consensus 330 ~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g-----~~~~--~ 402 (455)
T TIGR00892 330 AGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK-----NYKY--I 402 (455)
T ss_pred hchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC-----Ccch--H
Confidence 67888899999999999999999999999999999999999999999999999999999999988764 5777 4
Q ss_pred HHHHHH
Q psy8365 203 VLLLAG 208 (381)
Q Consensus 203 ~~~~~~ 208 (381)
++..++
T Consensus 403 f~~~~~ 408 (455)
T TIGR00892 403 FYASGS 408 (455)
T ss_pred HHHhhH
Confidence 555444
No 131
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.50 E-value=8.9e-13 Score=122.53 Aligned_cols=148 Identities=12% Similarity=0.126 Sum_probs=106.5
Q ss_pred HHHHHHHhhhhhhcCchhhHH-HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHH
Q psy8365 38 LMCLLGFGSYFCYDNPSSLEE-HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLV 116 (381)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~ 116 (381)
..++..+..+..........| ++++++|.|..+.++..+...++..++.+++|+++|| +|||+.+........++..+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~g~r~~~~~~~~~~~~~~~~ 340 (467)
T PRK09556 262 LLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDL-ANGRRALVACIALALIIFTL 340 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCchHHHHHHHHHHHHHH
Confidence 334444444333333444455 5667899999999999999999999999999999999 99998776654444333222
Q ss_pred HHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhH-hhHhhhhhhHHHHh
Q psy8365 117 FALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRV-GSTVNMFVAEPLYK 187 (381)
Q Consensus 117 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~ 187 (381)
... ...++.....+.+++.|+..............|.+|+++||.+.|+.+...++ |..++|.+.|.+.+
T Consensus 341 ~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 341 GVY-QHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHH-HhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 222 22456666777888888654333333345667999999999999999988886 77999999999988
No 132
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.50 E-value=1.2e-12 Score=119.31 Aligned_cols=138 Identities=17% Similarity=0.145 Sum_probs=111.3
Q ss_pred HHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q psy8365 57 EEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIF 136 (381)
Q Consensus 57 ~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 136 (381)
.|.+.++.|. ++.++..+.+.++..++.++.|++.|| +|+|+.+..+..+.+++.++... .++.+.+++.+++.
T Consensus 239 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~ 312 (399)
T PRK05122 239 ITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINR-LGGLRVAIVSLLVEILGLLLLWL---APSPWMALIGAALT 312 (399)
T ss_pred HHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHH---hccHHHHHHHHHHH
Confidence 3444455565 345666778888889999999999999 99999988888777777665544 57788888899999
Q ss_pred hccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHH
Q psy8365 137 GIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAG 208 (381)
Q Consensus 137 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~ 208 (381)
|++.+..++.......|.+|+++|+++.++++....+|..+++.+.+.+.+.. ||++ .+...++
T Consensus 313 G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~------g~~~--~~~~~~~ 376 (399)
T PRK05122 313 GFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF------GYPS--IFLAAAL 376 (399)
T ss_pred HHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CHHH--HHHHHHH
Confidence 99998888888888889999999999999999999999999999999888765 5777 4444433
No 133
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.49 E-value=1.9e-12 Score=120.92 Aligned_cols=134 Identities=12% Similarity=0.054 Sum_probs=102.3
Q ss_pred hhHHH-HHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHH
Q psy8365 55 SLEEH-FTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGR 133 (381)
Q Consensus 55 ~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 133 (381)
...|. +++++|.+..+.++..+...++..++.+..|+++|| +|||+.+..+.+...++...+.....+++...+++++
T Consensus 271 ~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (490)
T PRK10642 271 TYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDR-FGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGL 349 (490)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 34454 456789998888888888899999999999999999 9999998887765444333222211245677888899
Q ss_pred HHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 134 FIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 134 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
++.|++.+........++.|.+|++.|+.+.++......++..++|.+.+.+.+..
T Consensus 350 ~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~ 405 (490)
T PRK10642 350 LMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST 405 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99998877777777788899999999999999754445566678888888887654
No 134
>PRK03699 putative transporter; Provisional
Probab=99.49 E-value=2.5e-12 Score=116.90 Aligned_cols=141 Identities=15% Similarity=0.180 Sum_probs=111.6
Q ss_pred hHHH-HHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q psy8365 56 LEEH-FTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRF 134 (381)
Q Consensus 56 ~~~~-~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 134 (381)
..|. +++++|.|+.+.+.+.+.+.++..++.+..|+++|| ++||+.+.....+..+...+... .++...+.+..+
T Consensus 227 ~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 302 (394)
T PRK03699 227 WVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRF-FDLQRILTVLAGLALVLMYLFVN---TDDPSHLLYAIL 302 (394)
T ss_pred HHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHH---cCCchHHHHHHH
Confidence 3444 457789999999999999999999999999999999 99999988777665554443332 567777777788
Q ss_pred HHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHHH
Q psy8365 135 IFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGM 209 (381)
Q Consensus 135 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~ 209 (381)
+.|++.+..++...++..|..| +++++..+.......+|..++|.+.+.+.+.. ||+. .++..+++
T Consensus 303 ~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~------g~~~--~~~~~~~~ 368 (394)
T PRK03699 303 GLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHF------GLQA--ALLTANGL 368 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHh------Cchh--hhhhhHHH
Confidence 8898878788887777788776 55778888998899999999999999998876 5666 45555443
No 135
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.47 E-value=3.8e-12 Score=115.01 Aligned_cols=136 Identities=16% Similarity=0.083 Sum_probs=109.7
Q ss_pred HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhc
Q psy8365 59 HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGI 138 (381)
Q Consensus 59 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 138 (381)
.+.+++|.++.+.+++.+.......++.++.|++.|| +|||+.+..+.+...+....... .++.+.+.+.+++.|+
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~ 300 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKR-FGKRRLMLLAALAGVAFYTGLAA---DNSLWALLMLQLLNAI 300 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hcchhHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 4567889999999998888777778889999999999 99999888776655444333222 5678888888999999
Q ss_pred cchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHH
Q psy8365 139 GGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLA 207 (381)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~ 207 (381)
+.+...+....++.|..| ++|++++++++....+|..++|.+++.+.+.. ||+. .++..+
T Consensus 301 ~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~------g~~~--~~~~~~ 360 (375)
T TIGR00899 301 FIGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGWIIAGSVGGILAERW------SYHA--VYWFAI 360 (375)
T ss_pred HHHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc------cchh--HHHHHH
Confidence 988888888888999887 46679999999999999999999999998866 5776 444433
No 136
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.46 E-value=5.9e-13 Score=120.94 Aligned_cols=140 Identities=13% Similarity=0.066 Sum_probs=109.3
Q ss_pred hhhHHH-HHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHH-HHHhhhccchhHHHHH
Q psy8365 54 SSLEEH-FTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQL-VFALGAYVDSLFITIL 131 (381)
Q Consensus 54 ~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ 131 (381)
....|. +++++|.++.+.+...+...++..++.++.|+++|| +|||+.+.....+..+... ........++.+.+..
T Consensus 239 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (394)
T TIGR00883 239 TTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDR-IGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFF 317 (394)
T ss_pred HHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHH
Confidence 334454 447789999999999999999999999999999999 9999987765554443332 1111111356777778
Q ss_pred HHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHH-HHHHhHhhHhhhhhhHHHHhhhhccccccchh
Q psy8365 132 GRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQ-LSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQT 199 (381)
Q Consensus 132 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~ 199 (381)
..++.|++.+...+...+++.|.+|+++|+++.++. +....+|..++|.+++.+.++.+ +|++
T Consensus 318 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g-----~~~~ 381 (394)
T TIGR00883 318 LVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG-----DWYA 381 (394)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC-----cchh
Confidence 888899988888999999999999999999999984 56667899999999999988764 3776
No 137
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.45 E-value=1.1e-11 Score=115.43 Aligned_cols=153 Identities=16% Similarity=0.146 Sum_probs=112.9
Q ss_pred HHHHHhhhcCChHHHHHHHH-HhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhcc-chhHHHHHHHH
Q psy8365 57 EEHFTTDMHLTNAQYMNLYS-WYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYV-DSLFITILGRF 134 (381)
Q Consensus 57 ~~~~~~~~~~s~~~~g~~~s-~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~ 134 (381)
.|.+.+++|.++++.++... ...++..++.+++|+++|| +|+|+.+.++.++.+++.+.+...... ++.+.+.+.-+
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr-~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~ 324 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQR-LSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVF 324 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 35666789999999999974 6668999999999999999 999998877666555544433221222 45555555666
Q ss_pred HHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHH
Q psy8365 135 IFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLS 214 (381)
Q Consensus 135 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~ 214 (381)
++.++.+...+...++..+..+++.+++..++.+...++|..+++.+.|.+.+.. ||+. ++...++..+++
T Consensus 325 l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~------G~~~---~f~~~~~~~l~~ 395 (491)
T PRK11010 325 FENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH------GWPT---FYLFSVAAAVPG 395 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------ChHH---HHHHHHHHHHHH
Confidence 6666656666777888889999999999999999999999998888999998866 6876 444444444455
Q ss_pred HHHHH
Q psy8365 215 LLCSL 219 (381)
Q Consensus 215 ~~~~~ 219 (381)
++...
T Consensus 396 l~~~~ 400 (491)
T PRK11010 396 LLLLL 400 (491)
T ss_pred HHHHH
Confidence 44443
No 138
>PRK12382 putative transporter; Provisional
Probab=99.45 E-value=5.6e-12 Score=114.60 Aligned_cols=138 Identities=16% Similarity=0.149 Sum_probs=112.6
Q ss_pred hHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q psy8365 56 LEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFI 135 (381)
Q Consensus 56 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 135 (381)
..|.+.++.+.++ .++..+.+.++..+++++.|++.|| +|+||.+..+..+.+++.++... .++.+.+++..++
T Consensus 238 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l 311 (392)
T PRK12382 238 FVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDR-FGGVKVAIVSLLVETVGLLLLWL---APTAWVALAGAAL 311 (392)
T ss_pred HHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHHHH---cccHHHHHHHHHH
Confidence 3344445556553 4556667778888999999999999 99999999888887777665544 5778888889999
Q ss_pred HhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHH
Q psy8365 136 FGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLA 207 (381)
Q Consensus 136 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~ 207 (381)
.|++.+...+.....+.|.+|+|+|+++.++.+....+|..++|.+.+.+.++. ||++ .+...+
T Consensus 312 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~------g~~~--~~~~~~ 375 (392)
T PRK12382 312 TGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF------GYPS--VFLAGA 375 (392)
T ss_pred HHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CchH--HHHHHH
Confidence 999988888888888899999999999999999999999999999999998876 6887 444443
No 139
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.45 E-value=2.4e-12 Score=114.99 Aligned_cols=146 Identities=22% Similarity=0.278 Sum_probs=125.0
Q ss_pred cCchhhHHHHHhhh-cCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchh-hhHHHHHHHHHHHHHHHhhhccchhHH
Q psy8365 51 DNPSSLEEHFTTDM-HLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRM-GSTIYSVLVVIGQLVFALGAYVDSLFI 128 (381)
Q Consensus 51 ~~~~~~~~~~~~~~-~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (381)
.......|.+.++. |.++.+.++..+...++..++.++.|++.|| +|||+ .+..+..+..++.+.... .++.+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~ 267 (352)
T cd06174 192 YGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDR-LGRRRLLLLIGLLLAALGLLLLAL---APSLAL 267 (352)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHH---hccHHH
Confidence 34444455555554 8999999999999999999999999999999 99999 999888888888776655 677888
Q ss_pred HHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHH
Q psy8365 129 TILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAG 208 (381)
Q Consensus 129 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~ 208 (381)
+.+..++.|++.+...+....++.|..|+++|++.+++.+...++|..+++.+.+.+.+.. +|++ .+...++
T Consensus 268 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~------~~~~--~~~~~~~ 339 (352)
T cd06174 268 LLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG------GYGG--VFLILAA 339 (352)
T ss_pred HHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------Ccch--HHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998754 6777 4444433
No 140
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.45 E-value=4.1e-12 Score=115.02 Aligned_cols=137 Identities=18% Similarity=0.174 Sum_probs=110.1
Q ss_pred hHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q psy8365 56 LEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFI 135 (381)
Q Consensus 56 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 135 (381)
..|.+.++.|.++++.++..+...++..+++++.|++.|| +|+|+.+..+.....++..... + .........+
T Consensus 222 ~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~~-----~-~~~~~~~~~l 294 (381)
T PRK03633 222 LMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADR-FGRLLVLRVQVFVVILGSIAML-----S-QAAMAPALFI 294 (381)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHH-cCcHHHHHHHHHHHHHHHHHHh-----h-hHHHHHHHHH
Confidence 3566777789999999999999999999999999999999 9999998888777766654332 1 2233456677
Q ss_pred HhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHH
Q psy8365 136 FGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLA 207 (381)
Q Consensus 136 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~ 207 (381)
.|++.....|...+.+.|..|+++++...+..+...++|..+||.+++.+.++. ||++ .+...+
T Consensus 295 ~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~------g~~~--~f~~~~ 358 (381)
T PRK03633 295 LGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY------SDNL--LFIMIA 358 (381)
T ss_pred HHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CccH--HHHHHH
Confidence 788767778889899999999888888888888899999999999999998876 5666 444433
No 141
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.45 E-value=1.3e-12 Score=119.42 Aligned_cols=126 Identities=17% Similarity=0.192 Sum_probs=105.6
Q ss_pred HHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhh
Q psy8365 71 YMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSY 150 (381)
Q Consensus 71 ~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 150 (381)
.+.+.+...++..++.+..|++.|| +|||+.+..+.....++.+.... .++.+.+.+.+++.|++.+...+...+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 335 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDR-IGPEKILITALIFSVLLLIPMSF---VQTPLQLGILRFLLGAADGALLPAVQTL 335 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-cccchhHHHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHhhhHhhHHHHHHH
Confidence 4566677778888999999999999 99999999888777666554443 5778888899999999999999999999
Q ss_pred hhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHH
Q psy8365 151 AVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAG 208 (381)
Q Consensus 151 i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~ 208 (381)
+.+..|+++||+.+++.+....+|..+||.+++.+.+.. ||++ .+...++
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~------g~~~--~f~~~~~ 385 (408)
T PRK09874 336 LVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY------GFRA--VFLVTAG 385 (408)
T ss_pred HHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc------chhH--HHHHHHH
Confidence 999999999999999999999999999999999998765 5777 4544443
No 142
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.43 E-value=1.4e-12 Score=113.07 Aligned_cols=162 Identities=15% Similarity=0.107 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHhhhhhhcCchhhHH-HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhc-CchhhhHHHHHHHH
Q psy8365 34 LALLLMCLLGFGSYFCYDNPSSLEE-HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVF-GIRMGSTIYSVLVV 111 (381)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~-G~r~~~~~~~~~~~ 111 (381)
..+.+++++++..+..+..+.-=.| ++.|..|.|..+.++..+.+-++...+.+++|+++||++ |||....+...+..
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 3466777777777777754443333 677788999999999999999999999999999999976 78776555444433
Q ss_pred HHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhH-hhHhhhhhhHHHHhhhh
Q psy8365 112 IGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRV-GSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 112 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~~ 190 (381)
..++......-..|+.+..+.-++.|+..-+.+-.......|..|++--|.+.|+...+..+ |.+.+....+.+.+..
T Consensus 332 ~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~- 410 (448)
T COG2271 332 TASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTW- 410 (448)
T ss_pred HHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecC-
Confidence 33333333322346788888888999987777777777788999999999999999999998 8888888777777763
Q ss_pred ccccccchhhH
Q psy8365 191 KFGLIGYQTLG 201 (381)
Q Consensus 191 ~~~~~gWr~~~ 201 (381)
||...+
T Consensus 411 -----gW~g~F 416 (448)
T COG2271 411 -----GWDGGF 416 (448)
T ss_pred -----CCcchH
Confidence 788833
No 143
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.43 E-value=3.3e-12 Score=119.89 Aligned_cols=134 Identities=14% Similarity=0.204 Sum_probs=103.1
Q ss_pred hhhHHHHH-hhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHH
Q psy8365 54 SSLEEHFT-TDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILG 132 (381)
Q Consensus 54 ~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 132 (381)
....|.+. +++|.+..+.+++.+...++..++.++.|+++|| +|||+.+..+..+..++.+..... ...+.+.+.+.
T Consensus 295 ~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 372 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDW-LGTRKAYVCSLLISQLLIIPVFAI-GGANVWVLGLL 372 (496)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHhhc-cccHHHHHHHH
Confidence 34456555 6899999999999999999999999999999999 999999888776655554433221 12344444444
Q ss_pred HHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 133 RFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 133 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
.++.+.......+....++.|.+|+++|++.+++.+....+|..+||.+++.+.+..
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~ 429 (496)
T PRK03893 373 LFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRL 429 (496)
T ss_pred HHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC
Confidence 554443333345566778899999999999999999999999999999999998876
No 144
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.43 E-value=4.7e-12 Score=121.53 Aligned_cols=113 Identities=14% Similarity=0.107 Sum_probs=98.7
Q ss_pred HHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhh
Q psy8365 72 MNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYA 151 (381)
Q Consensus 72 g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 151 (381)
.+...+..++..++.++.|+++|| +|||++++++.++.+++.+++.+ .++...+++.+++.|++.+..++...+++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr-~GRr~~l~~~~~lsai~~ll~~~---~~s~~~ll~~~~l~g~~~~~~~~~~~a~~ 673 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDK-IGRLRMLAGSMVLSCISCFFLSF---GNSESAMIALLCLFGGLSIAAWNALDVLT 673 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHH---HccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556778889999999999999 99999999998888888776654 56777788888898888888889999999
Q ss_pred hhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhh
Q psy8365 152 VLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKY 188 (381)
Q Consensus 152 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (381)
+|++|.++|++++|+.++...+|.+++|.+++.+.+.
T Consensus 674 aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~ 710 (742)
T TIGR01299 674 VELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI 710 (742)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999887663
No 145
>PRK10504 putative transporter; Provisional
Probab=99.42 E-value=1.1e-11 Score=115.56 Aligned_cols=138 Identities=11% Similarity=0.044 Sum_probs=112.9
Q ss_pred CchhhHHHHHh-hhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHH
Q psy8365 52 NPSSLEEHFTT-DMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITI 130 (381)
Q Consensus 52 ~~~~~~~~~~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 130 (381)
......|.+.+ .+|.++.+.++......++..++.++.|++.|| +|||+++..+..+.+++..++......++.+.+.
T Consensus 279 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (471)
T PRK10504 279 MLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNR-FGYRRVLVATTLGLALVSLLFMLVALLGWYYLLP 357 (471)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHHHHHHHhccccccHHHHH
Confidence 33444565555 589999999999998888888888999999999 9999999988887777766554422224444455
Q ss_pred HHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 131 LGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 131 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
+..++.|++.+...+....+..+..|+++|+.+.++.+....+|..+|+.+++.+.+..+
T Consensus 358 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 358 FVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 667788898888888888999999999999999999999999999999999999887664
No 146
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.42 E-value=9.6e-12 Score=115.14 Aligned_cols=156 Identities=13% Similarity=0.212 Sum_probs=100.1
Q ss_pred hhhHHH-HHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhc--Cchhhh-HHHHHHHHHHHHHHHhhhccchhHHH
Q psy8365 54 SSLEEH-FTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVF--GIRMGS-TIYSVLVVIGQLVFALGAYVDSLFIT 129 (381)
Q Consensus 54 ~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~--G~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 129 (381)
....|. ++++.|.+..+.++....+.++..++.++.|+++|| + +||+.. .....+..++.+.+.. ...++....
T Consensus 273 ~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr-~~~~r~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~ 350 (452)
T PRK11273 273 LDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFMTLVTIATIVYWL-NPAGNPTVD 350 (452)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCCcchHHHHHHHHHHHHHHHHHH-hcccChHHH
Confidence 334455 455578999999999999999999999999999999 9 455432 2222223333222222 112344444
Q ss_pred HHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhH-hhhhhhHHHHhhhhccccccchhhHHHHHHHH
Q psy8365 130 ILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGST-VNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAG 208 (381)
Q Consensus 130 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~ 208 (381)
.+..++.|.+..........+..|.+|+++||++.|+.+....+|.. .+|.+.+.+.++. ||+. .++..++
T Consensus 351 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~------g~~~--~f~~~~~ 422 (452)
T PRK11273 351 MACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF------GWDG--GFMVMIG 422 (452)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh------cchH--HHHHHHH
Confidence 45555555543232333345667999999999999999988888765 4799999998876 5776 4544444
Q ss_pred HHHHHHHHHHHh
Q psy8365 209 MTCVLSLLCSLL 220 (381)
Q Consensus 209 ~~~~~~~~~~~~ 220 (381)
.++++++....
T Consensus 423 -~~~~~~~~~~~ 433 (452)
T PRK11273 423 -GSILAVILLIV 433 (452)
T ss_pred -HHHHHHHHHHH
Confidence 44444444443
No 147
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.41 E-value=9.6e-12 Score=113.37 Aligned_cols=146 Identities=12% Similarity=0.126 Sum_probs=107.9
Q ss_pred CchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhH-HHHHHHHHHHHHHHhhh--ccchhHH
Q psy8365 52 NPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGST-IYSVLVVIGQLVFALGA--YVDSLFI 128 (381)
Q Consensus 52 ~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~ 128 (381)
......|.+.+++|.+..+.+++.+...++..++.+..|+++|| +|||+.+. .+.+...++.+.+.... ..++.+.
T Consensus 240 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~ 318 (402)
T TIGR00897 240 GFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDK-LGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAV 318 (402)
T ss_pred HHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHH
Confidence 33445677778899999999999999999999999999999999 99988764 23333333332222211 1346677
Q ss_pred HHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHH
Q psy8365 129 TILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAG 208 (381)
Q Consensus 129 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~ 208 (381)
..+..++.|++.+...+ ....+.|..| ++|+++.|+.+....+|..++|.+++.+.+.. ||+. .+++.++
T Consensus 319 ~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~------g~~~--~~~~~a~ 388 (402)
T TIGR00897 319 ALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFF------GAIG--VVWIFAA 388 (402)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------chHH--HHHHHHH
Confidence 77888888988776544 4456677654 68999999999999999999999999998876 4665 4555444
No 148
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.41 E-value=1.6e-11 Score=111.55 Aligned_cols=131 Identities=10% Similarity=-0.021 Sum_probs=102.9
Q ss_pred hhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q psy8365 55 SLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRF 134 (381)
Q Consensus 55 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 134 (381)
...|.+.+++|.+..+.|...+.+.++..++.+..|++.|| +|||+.+..+..+..++..+.... .++...+. -.
T Consensus 226 ~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r-~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~--~~ 300 (393)
T PRK09705 226 AWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARH-QDRRKLLMLALVLQLVGFCGFIWL--PLQLPVLW--AM 300 (393)
T ss_pred HHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHHHHHHHHHHHc--cchHHHHH--HH
Confidence 34455556789999999999999999999999999999999 999999888877776665544321 22222222 24
Q ss_pred HHhccchhhhhhhhhhhhhccc-CCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 135 IFGIGGESLAVAQNSYAVLWFK-GKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 135 l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
+.|++.+...+.......+..+ +++|++..++.+....++..++|.+.+++.+..+
T Consensus 301 l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g 357 (393)
T PRK09705 301 VCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG 357 (393)
T ss_pred HHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5677777777777766677774 5789999999999999999999999999999875
No 149
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.40 E-value=2.1e-12 Score=116.02 Aligned_cols=131 Identities=19% Similarity=0.218 Sum_probs=113.2
Q ss_pred hhHHHHHhh-hcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccc-hhHHHHHH
Q psy8365 55 SLEEHFTTD-MHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVD-SLFITILG 132 (381)
Q Consensus 55 ~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 132 (381)
...|.+.++ +|.++.+.+.+.+...++..++.++.+++.|| +|||+.+..+..+.+++...... .+ +.+.+.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 307 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRY-FKRMALMTGAIFVIGLAILVVGL---TPPNFPLFLVL 307 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHHHh---hchhHHHHHHH
Confidence 344666554 89999999999999999999999999999999 99999988877666666554443 44 48888899
Q ss_pred HHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 133 RFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 133 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
.++.|++.+...+...+++.|.+|+++|++..++.+....+|..+++.+++.+.++.
T Consensus 308 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 308 WFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999999988754
No 150
>PRK03545 putative arabinose transporter; Provisional
Probab=99.39 E-value=1.4e-11 Score=111.90 Aligned_cols=132 Identities=11% Similarity=0.094 Sum_probs=105.7
Q ss_pred HHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q psy8365 57 EEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIF 136 (381)
Q Consensus 57 ~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 136 (381)
.|.+++++|.|+.+.+++.+...++..+++++.|++.|| +|||+.. .+..+..++..... ...++.+.+.+..++.
T Consensus 229 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~-~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~ 304 (390)
T PRK03545 229 EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNR-HPSGFLL-IAIALLLVCLLLLL--PAANSEWHLSVLSIFW 304 (390)
T ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhc-cchhHHH-HHHHHHHHHHHHHH--HHhchHHHHHHHHHHH
Confidence 355666789999999999999999999999999999999 9988654 44444433333222 2256788888888999
Q ss_pred hccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchh
Q psy8365 137 GIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQT 199 (381)
Q Consensus 137 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~ 199 (381)
|++.+...+...+.+.|..| ++|++++++++....+|..+||.+++.+.++. |+|.
T Consensus 305 g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~------g~~~ 360 (390)
T PRK03545 305 GIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHL------GLSS 360 (390)
T ss_pred HHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------ChhH
Confidence 99877777777788888776 68999999999999999999999999999877 5776
No 151
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.39 E-value=2.4e-11 Score=109.99 Aligned_cols=130 Identities=12% Similarity=0.020 Sum_probs=110.0
Q ss_pred hHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q psy8365 56 LEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFI 135 (381)
Q Consensus 56 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 135 (381)
..|.+.+|.|.++.+.|.+.+...++..+..++.|++.|| +|+|+.+..+.+..+++.++... .++.+.+++..++
T Consensus 227 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l 302 (382)
T PRK11128 227 FSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRR-WSARDLLLLSAICGVVRWGLMGS---TTALPWLIVIQIL 302 (382)
T ss_pred HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHH
Confidence 3345556799999999999999999999999999999999 99999999888887776654443 6889999999999
Q ss_pred HhccchhhhhhhhhhhhhcccCCcchHHHHHHH-HHHhHhhHhhhhhhHHHHhhhh
Q psy8365 136 FGIGGESLAVAQNSYAVLWFKGKELNMVFGFQL-SLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 136 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
.|++.+...+....++.+. +++++++..+..+ ....+|..+||.++|.+.+..+
T Consensus 303 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g 357 (382)
T PRK11128 303 HCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG 357 (382)
T ss_pred HHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999898889888988886 5567788888886 5567888999999999998774
No 152
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.37 E-value=9.4e-12 Score=113.59 Aligned_cols=130 Identities=14% Similarity=0.128 Sum_probs=107.5
Q ss_pred HHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHh
Q psy8365 58 EHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFG 137 (381)
Q Consensus 58 ~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 137 (381)
+.+.+++|.+..+.+++.+...++..++.++.|++.|| +|||+.+..+.....+....... ..++.+.+.+..++.|
T Consensus 263 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 339 (405)
T TIGR00891 263 TYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDW-LGRRKAYVCSLLAGQLLIIPVFA--IGANVAVLGLGLFFQQ 339 (405)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchhhhHHHHHHHHHHHHHHHH--hCCchHHHHHHHHHHH
Confidence 45667889999999999999999999999999999999 99999988877655333222211 2456667777777777
Q ss_pred ccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 138 IGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 138 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
+..+...+....++.|.+|+++|++++|+.+....+|..++|++.+.+.++.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 340 MLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred HHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 77677777788899999999999999999999999999999999999998775
No 153
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.37 E-value=2.4e-11 Score=111.85 Aligned_cols=144 Identities=10% Similarity=0.090 Sum_probs=95.1
Q ss_pred hhHHH-HHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhc--Cchhhh-HHHHHHHHHHHHHHHhhhccchhHHHH
Q psy8365 55 SLEEH-FTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVF--GIRMGS-TIYSVLVVIGQLVFALGAYVDSLFITI 130 (381)
Q Consensus 55 ~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~--G~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~ 130 (381)
...|. +.+++|.+..+.+...+.+.++..++.++.|+++|| + ++|+.. ....+...+......... ..+.....
T Consensus 264 ~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 341 (434)
T PRK11663 264 DWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDK-LFNGNRGPMNLIFAAGILLSVGSLWLMP-FASYVMQA 341 (434)
T ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHH-hccCCccHHHHHHHHHHHHHHHHHHHcc-cccHHHHH
Confidence 33444 446789999999999999999999999999999999 8 333332 221111111111111111 23333333
Q ss_pred HHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHH
Q psy8365 131 LGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAG 208 (381)
Q Consensus 131 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~ 208 (381)
+..+..|++.............|.+|+++|+++.|+.+....+|..++|.+.+.+.+.. ||+. .+...++
T Consensus 342 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~------g~~~--~f~~~~~ 411 (434)
T PRK11663 342 ACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIW------HWTG--FFVVISI 411 (434)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhc------ccHH--HHHHHHH
Confidence 44444454322222233456789999999999999999999999999999999998865 5777 5554444
No 154
>PRK15075 citrate-proton symporter; Provisional
Probab=99.36 E-value=3.4e-11 Score=110.89 Aligned_cols=137 Identities=17% Similarity=0.082 Sum_probs=97.9
Q ss_pred chhhHHHHH-hhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHH-HHhhhccchhHHHH
Q psy8365 53 PSSLEEHFT-TDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLV-FALGAYVDSLFITI 130 (381)
Q Consensus 53 ~~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 130 (381)
.....|.+. +.+|.+..+.++....+.++..++.+++|+++|| +|||+.+..+..+..+.... .......+++....
T Consensus 257 ~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (434)
T PRK15075 257 ITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDR-IGRRPVLIAFTVLAILTAYPALSWLVAAPSFARML 335 (434)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHH
Confidence 334445544 4589999999999889999999999999999999 99999887765443322211 11111134444454
Q ss_pred HHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHH-HHhHhhHhhhhhhHHHHhhhh
Q psy8365 131 LGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLS-LSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 131 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~~ 190 (381)
+...+.|++.+...+....++.|.+|+++|+...++... +..++..++|.+.+.+.++.+
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 336 AVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 555666677666666677889999999999999998644 444457789999999988774
No 155
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.36 E-value=2e-11 Score=113.29 Aligned_cols=132 Identities=16% Similarity=0.112 Sum_probs=118.2
Q ss_pred hhHHHHH-hhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHH
Q psy8365 55 SLEEHFT-TDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGR 133 (381)
Q Consensus 55 ~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 133 (381)
..+|.+. +++|.++...|++.+.+.+|..++++..+++.+| +++++.+..+.+..+++.+.+++ +++.+...+..
T Consensus 239 aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~-~~~~~lv~~~~~~~a~~~~~lal---~~~~~~~~~~l 314 (524)
T PF05977_consen 239 ALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRR-LSSRRLVLLASLLFALALLLLAL---SPSFWLALIAL 314 (524)
T ss_pred HhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchhhHHHHHHHHHHHHHHhc---chHHHHHHHHH
Confidence 4456654 5789999999999999999999999999999999 99999988888888777665554 78999999999
Q ss_pred HHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 134 FIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 134 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
++.|++.....+...+.+.+..|++.|||+++++++....+..+|..+.|.+.+..+
T Consensus 315 ~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g 371 (524)
T PF05977_consen 315 FLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG 371 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999888888889999999999999999999999999999999999999999874
No 156
>TIGR00895 2A0115 benzoate transport.
Probab=99.36 E-value=8.7e-12 Score=113.46 Aligned_cols=130 Identities=15% Similarity=0.165 Sum_probs=106.1
Q ss_pred CchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHH
Q psy8365 52 NPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITIL 131 (381)
Q Consensus 52 ~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 131 (381)
......|.+.+++|.++.+.++..+...++..++.++.|++.|| +|||+...... +..+...+... ..++.+.+++
T Consensus 268 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~ 343 (398)
T TIGR00895 268 FLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADR-LGPRVTALLLL-LGAVFAVLVGS--TLFSPTLLLL 343 (398)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHH-HHHHHHHHHHH--HhhCHHHHHH
Confidence 33445578888999999999999999999999999999999999 99995544333 33333222222 1456777788
Q ss_pred HHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHH
Q psy8365 132 GRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPL 185 (381)
Q Consensus 132 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 185 (381)
..++.|++.+...+...+++.|.+|+++|+++.|+......+|..+||.+++.+
T Consensus 344 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 344 LGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 889999999999999999999999999999999999999999999999988765
No 157
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.36 E-value=2.6e-11 Score=110.17 Aligned_cols=136 Identities=15% Similarity=0.020 Sum_probs=96.9
Q ss_pred CchhhHH-HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhH-HHHHHHHHH----HHHHHhhhccch
Q psy8365 52 NPSSLEE-HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGST-IYSVLVVIG----QLVFALGAYVDS 125 (381)
Q Consensus 52 ~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~-~~~~~~~~~----~~~~~~~~~~~~ 125 (381)
......| .+++++|.++.+.+++.+...++..++.++.|++.|| +|||+... .......++ .+........++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (399)
T TIGR00893 233 FFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDL-LLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNI 311 (399)
T ss_pred HHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHH-HhhcccchhHHHHHHHHHHHHHHHHHHHhccchh
Confidence 3333344 4556789999999999999999999999999999999 99996111 111111111 111111111234
Q ss_pred hHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 126 LFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 126 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
.+.......+.+.+.+ ..+...+++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..
T Consensus 312 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~ 374 (399)
T TIGR00893 312 PYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT 374 (399)
T ss_pred HHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC
Confidence 4444444445455544 78889999999999999999999999999999999999999998866
No 158
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.36 E-value=1.5e-09 Score=95.77 Aligned_cols=317 Identities=14% Similarity=0.132 Sum_probs=200.5
Q ss_pred cCchhhHHHHHhh-hcCChHHHH-HHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHH
Q psy8365 51 DNPSSLEEHFTTD-MHLTNAQYM-NLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFI 128 (381)
Q Consensus 51 ~~~~~~~~~~~~~-~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (381)
..-+.+.|++.+. .|+|+.|+. -+.-...-.+....++...+.|. .+.|++++++.+...+...++.+ .++...
T Consensus 21 PsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~---~~sv~~ 96 (412)
T PF01770_consen 21 PSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLF---GTSVLA 96 (412)
T ss_pred CCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHH---HCcHHH
Confidence 4445556777775 899999875 55666777778888999999999 99999999998887777766655 799999
Q ss_pred HHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHH
Q psy8365 129 TILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAG 208 (381)
Q Consensus 129 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~ 208 (381)
+-+..+..|++ .....+-.+++=...|+++-.++.+.......+|..++.++|..+....+.. .+. ...+..
T Consensus 97 mq~~q~~yg~~-~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~s----y~~---L~~isl 168 (412)
T PF01770_consen 97 MQLMQFFYGLA-TAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVS----YFQ---LNYISL 168 (412)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----HHH---HHHHHH
Confidence 99999999999 4457777888888889999999999999999999999998888776643211 222 223333
Q ss_pred HHHHHHHHHHHhhcccch------hhHH--H-----hhh-cc-cCc------cc---ccc--------ccccc---ccCc
Q psy8365 209 MTCVLSLLCSLLLGCMDK------RAER--I-----LNR-RN-AGE------TE---VAR--------LSDVK---HFPV 253 (381)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~------~~~~--~-----~~~-~~-~~~------~~---~~~--------~~~~~---~~~~ 253 (381)
....++++..++++..++ +.+. . .++ ++ +++ ++ +.. +++++ + +|
T Consensus 169 ~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~-~~ 247 (412)
T PF01770_consen 169 ASVSLALLIALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYS-NP 247 (412)
T ss_pred HHHHHHHHHHHHcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhc-Cc
Confidence 344455555444432211 0000 0 000 00 000 00 000 11111 2 56
Q ss_pred chhhHHHHHHHhhhhhhcchhhHHHHHHHh--cCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHH-HHHH
Q psy8365 254 SFWMVVVIIVSYYTSIFPFVSLAQELFVKR--FNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFIS-LMVS 330 (381)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~-~~~~ 330 (381)
.++.-.+-..+...+++.+.+|......+. .+-+..-.|..-+...+.+.++.+..|++-.++.+...+.... ..+.
T Consensus 248 ~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~ 327 (412)
T PF01770_consen 248 RLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQ 327 (412)
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHH
Confidence 776666766777777777777777666554 1333445577777888888888888888855555433322222 2222
Q ss_pred HHHHHHHhh--ccchhHHHHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 331 IVCHFMVGH--TMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 331 ~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
..++.++.. +.+..++..+++...+.+..+....-++.....+.-|-..|
T Consensus 328 a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFG 379 (412)
T PF01770_consen 328 AGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFG 379 (412)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeee
Confidence 223333333 33445556666666676666666666666666665665554
No 159
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.35 E-value=2.7e-11 Score=111.44 Aligned_cols=134 Identities=13% Similarity=0.070 Sum_probs=98.3
Q ss_pred hhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHH
Q psy8365 55 SLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRF 134 (381)
Q Consensus 55 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 134 (381)
...|.+.++.|.++.+.+...+...++..++.++.|++.|| +|||+.+..+.++..+..+..... ..++...+.+..+
T Consensus 252 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 329 (426)
T PRK12307 252 GLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADR-IGLKKTFSIGLLMSFLFIFPLFRI-PQDNYLLLGACLF 329 (426)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHH-ccccHHHHHHHHH
Confidence 34566667789999999999999999999999999999999 999999888877665554433221 1122222222222
Q ss_pred HHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 135 IFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 135 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
..+.+.....+....++.|.+|+++|++++|+......+|..++|.+.+.+.+..+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g 385 (426)
T PRK12307 330 GLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG 385 (426)
T ss_pred HHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc
Confidence 22222223344556778899999999999999999999999999999999987663
No 160
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.34 E-value=2.1e-11 Score=111.32 Aligned_cols=314 Identities=17% Similarity=0.127 Sum_probs=179.5
Q ss_pred hhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhc-----CchhhhHHHHHHHHHHHHHHHhhh-ccchhH
Q psy8365 54 SSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVF-----GIRMGSTIYSVLVVIGQLVFALGA-YVDSLF 127 (381)
Q Consensus 54 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~-----G~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 127 (381)
....|.+++++|+++++.....+...+...+ .++.|.++|. + .||+-++++.++.+++.+.++..+ ...+..
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~-~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~ 87 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDS-FPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAA 87 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhccc-ccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhh
Confidence 3456789999999999999999999999865 8999999998 6 244445556655544444444322 134667
Q ss_pred HHHHHHHHHhccchhhhhhhhhhhhhccc--CCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHH
Q psy8365 128 ITILGRFIFGIGGESLAVAQNSYAVLWFK--GKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLL 205 (381)
Q Consensus 128 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~ 205 (381)
...+.-++..+|.......+.+.+.|... +++||...+.......+|.+++..++|.+.+..+ +|+ .+.+
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~------~~~--~f~i 159 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG------PQG--VFLI 159 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC------CeE--EehH
Confidence 77777788899999999999999999883 3457888889999999999999999999888764 455 3444
Q ss_pred HHHHHHHHHHHHHHhhcccchhhHHHhh---hccc-Ccc----ccc---ccccccccCcchhhHHH-HHHHhhhhhhcch
Q psy8365 206 LAGMTCVLSLLCSLLLGCMDKRAERILN---RRNA-GET----EVA---RLSDVKHFPVSFWMVVV-IIVSYYTSIFPFV 273 (381)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~----~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 273 (381)
.++...+..+. .+.+.. ++++++..+ .+++ .+. .+. ..++..+ .|.+|...+ ..++.........
T Consensus 160 ~~~~~~l~~~~-~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~i~~~~~~~~~~~~~~~~~~~ 236 (433)
T PF03092_consen 160 SAALPLLMLIV-ALFLLE-ERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQ-QRAIWQPILFFIFFFNLPPSISS 236 (433)
T ss_pred HHHHHHHHHHH-HHHhhh-hccccccchhhcccccccchhhHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHhccCCCC
Confidence 43333322222 222211 111100000 0000 000 011 1122222 455665444 2222222211111
Q ss_pred hhHHHHHHHhcC---CChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh-ccch------
Q psy8365 274 SLAQELFVKRFN---LDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH-TMID------ 343 (381)
Q Consensus 274 ~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~------ 343 (381)
...-.+..+..+ +++...+....+..++.+++..+..+...+..-|+.......+..+..+.-... ..++
T Consensus 237 a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~ 316 (433)
T PF03092_consen 237 ASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIP 316 (433)
T ss_pred ccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcC
Confidence 100001122334 788888887777777777777777666666665666444444443333321111 1111
Q ss_pred ----hHHHHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 344 ----PHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 344 ----~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
...--++..+......-+...+.+|+.|+...|+.+|
T Consensus 317 d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~ya 357 (433)
T PF03092_consen 317 DQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYA 357 (433)
T ss_pred CeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHH
Confidence 1111223333333333334677889999988888765
No 161
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.34 E-value=3.3e-11 Score=111.24 Aligned_cols=122 Identities=13% Similarity=0.159 Sum_probs=102.6
Q ss_pred ChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhh
Q psy8365 67 TNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVA 146 (381)
Q Consensus 67 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 146 (381)
++.+.+++.+...++..++.+++++++|| +|+|+.+..+..+.+++.+..... .++.+.+.+..++.|++.+...+.
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~ 331 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKK-FGRKILFAGGILLMVLGYLIFFFA--GSNLPLILVLIILAGFGQNFVTGL 331 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHc--chhHHHHHHHHHHHHHHHHHHHHH
Confidence 56677888888899999999999999999 999999999988887776655442 246677778888899999988998
Q ss_pred hhhhhhhccc-------CCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhc
Q psy8365 147 QNSYAVLWFK-------GKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEK 191 (381)
Q Consensus 147 ~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 191 (381)
..++++|..| ++++|...|+.+....+|..+++.+.+.+.+..+.
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 332 VWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8999988865 45679999999999999999999999999887643
No 162
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.34 E-value=3.1e-11 Score=112.65 Aligned_cols=160 Identities=12% Similarity=0.101 Sum_probs=113.8
Q ss_pred HHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHh
Q psy8365 40 CLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFAL 119 (381)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~ 119 (381)
.+..+.............|.+.+++|.+..+.++......++..++.++.|+++|| +|||+.+..+.++.+++.++...
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~ 368 (481)
T TIGR00879 290 VLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDR-FGRRPLLLIGAAGMAICLFVLGI 368 (481)
T ss_pred HHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHH
Confidence 33333333334444555678888899999889999999999999999999999999 99999999887777776665542
Q ss_pred hh--ccc------hhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhc
Q psy8365 120 GA--YVD------SLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEK 191 (381)
Q Consensus 120 ~~--~~~------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 191 (381)
.. ..+ +...+....++.+.......+....++.|.+|+++|++++++.+...++|.++++.+.+.+.++.
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~-- 446 (481)
T TIGR00879 369 LGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI-- 446 (481)
T ss_pred HhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 11 111 22233333333322222334556677799999999999999999999999999999999888765
Q ss_pred cccccchhhHHHHHHHH
Q psy8365 192 FGLIGYQTLGIVLLLAG 208 (381)
Q Consensus 192 ~~~~gWr~~~~~~~~~~ 208 (381)
+|++ .++..++
T Consensus 447 ----~~~~--~f~~~~~ 457 (481)
T TIGR00879 447 ----GVGG--VFIFFGG 457 (481)
T ss_pred ----Cccc--eehhHHH
Confidence 5776 4444443
No 163
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.34 E-value=3.8e-11 Score=99.60 Aligned_cols=152 Identities=17% Similarity=0.144 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHH
Q psy8365 32 RVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVV 111 (381)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~ 111 (381)
||..+..........+ ..+.++...|++++.+|.|.+|.+.+.+...+|..+ .++.|.+.|| +|+|.++.++.+...
T Consensus 1 rW~~l~a~~~v~~~~G-t~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~-~gp~~~l~iG~~~~~ 77 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSG-TTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDR-FGPWVVLLIGAVLGF 77 (250)
T ss_pred ChhhHHHHHHHHHhcC-cccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHh-cchHHHHHHHHHHHH
Confidence 4555444444443333 446677777899999999999999999999999876 5889999999 999999999999999
Q ss_pred HHHHHHHhhh--c--cchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHh
Q psy8365 112 IGQLVFALGA--Y--VDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYK 187 (381)
Q Consensus 112 ~~~~~~~~~~--~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (381)
+|..+..... . ..++|.+.+..++.|.+.+....+......+.|| ++||.+.|+.-...+++..+-..+...+.+
T Consensus 78 ~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 78 VGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred HHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 9887665421 1 2477888888888888877777777777778898 689999999999999998885555444443
No 164
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.34 E-value=7.2e-11 Score=103.58 Aligned_cols=157 Identities=13% Similarity=0.166 Sum_probs=120.9
Q ss_pred hhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHH
Q psy8365 49 CYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFI 128 (381)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (381)
....+..+.|.+++..|.+.+.++++.-.+.++..+++.++|++.|| +.|+.+.....+.++..+.+.+. .++.+.
T Consensus 227 ~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~~~l~l~~~--~~~~~~ 302 (394)
T COG2814 227 HFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLALALLALTFT--GASPAL 302 (394)
T ss_pred hhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHHHHHHHHHh--cchHHH
Confidence 33455667789999999999999999999999999999999999999 77777777767666665554442 566777
Q ss_pred HHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHH
Q psy8365 129 TILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAG 208 (381)
Q Consensus 129 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~ 208 (381)
.++.-++.|+............+++ ..||.+..+.+++....++|..+|..+++.+.++. |++. ..+.++
T Consensus 303 ~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~------g~~~---~~~~~a 372 (394)
T COG2814 303 ALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDAL------GYAA---TGWVGA 372 (394)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------chHH---HHHHHH
Confidence 7777777788766666666666666 33588999999999999999999999999999986 4555 334444
Q ss_pred HHHHHHHHHHH
Q psy8365 209 MTCVLSLLCSL 219 (381)
Q Consensus 209 ~~~~~~~~~~~ 219 (381)
+..+.++...+
T Consensus 373 ~l~~~a~~~~~ 383 (394)
T COG2814 373 ALLLLALLLAL 383 (394)
T ss_pred HHHHHHHHHHH
Confidence 44444444433
No 165
>PRK09952 shikimate transporter; Provisional
Probab=99.34 E-value=6e-11 Score=109.32 Aligned_cols=137 Identities=16% Similarity=0.189 Sum_probs=100.0
Q ss_pred HHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhh-ccchhHHHHHHHHHH
Q psy8365 58 EHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGA-YVDSLFITILGRFIF 136 (381)
Q Consensus 58 ~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~r~l~ 136 (381)
+++++++|.++.+...+.....+...++.++.|+++|| +|||+.+..+.++..++.+.+.... ..++...+++..++.
T Consensus 275 ~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 353 (438)
T PRK09952 275 NYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADR-FGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLA 353 (438)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 35567789888876666666667778888999999999 9999998887666555443332211 123344545566677
Q ss_pred hccchhhhhhhhhhhhhcccCCcchHHHHHHHH-HHhHhhHhhhhhhHHHHhhhhccccccchh
Q psy8365 137 GIGGESLAVAQNSYAVLWFKGKELNMVFGFQLS-LSRVGSTVNMFVAEPLYKYVEKFGLIGYQT 199 (381)
Q Consensus 137 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~ 199 (381)
+++.+...+...+++.|.+|.+.|+...++... +..+|..++|.+.+.+.+..+. +|+.
T Consensus 354 ~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~----~~~~ 413 (438)
T PRK09952 354 NIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGG----SWHS 413 (438)
T ss_pred HHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCC----CchH
Confidence 888787788888999999999999988888554 4458889999999998875431 4666
No 166
>KOG4686|consensus
Probab=99.33 E-value=1.9e-11 Score=100.15 Aligned_cols=152 Identities=13% Similarity=0.150 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHH
Q psy8365 32 RVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVV 111 (381)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~ 111 (381)
....+..+|+.+.+..+.....++ ..+++.+|+|+...+.+.+......++.+++.|.++|| +|++-..+.+..+..
T Consensus 265 pfw~~~iicv~yyva~fPFi~lg~--~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk-~G~n~~wv~~a~~~t 341 (459)
T KOG4686|consen 265 PFWVLVIICVLYYVAWFPFITLGP--MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDK-YGFNLWWVASACILT 341 (459)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhH--HHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhh-hcceehhHHHHHHHH
Confidence 344555666666555555544454 57899999999999999999888889999999999999 999988777655544
Q ss_pred HHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 112 IGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 112 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
+..-... .-+++.=+.+..+.|+............++...|+++.|.+.|..+...++|.++.|++++.+.+.-+
T Consensus 342 l~~H~~l----~Ft~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 342 LLGHSGL----FFTFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred HHHhhhH----HhhhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 4332111 12334445677888888666655567788888999999999999999999999999999999988665
No 167
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.30 E-value=5e-11 Score=108.52 Aligned_cols=140 Identities=12% Similarity=0.174 Sum_probs=111.4
Q ss_pred cCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhh
Q psy8365 65 HLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLA 144 (381)
Q Consensus 65 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 144 (381)
+.+..+.|...+...+...++.+..|++.|| +|+|+.+.++..+.+++..+... +++.+.+++.++++|++.....
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r-~g~~~~l~~~~~l~~l~~~~~~~---~~~~~~~~~~~~l~g~~~~~~~ 325 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINR-IGAKNALLIAGTIMSVRIIGSSF---ATTALEVVILKMLHAFEVPFLL 325 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccchhHHHHHHHHHHHHHHHHh---cCChHHHHHHHHHHHHHHHHHH
Confidence 5566778999999999999999999999999 99999999988887776665444 6788888999999999877666
Q ss_pred hhhhhhhhhcccCCcchHHHHH-HHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHH
Q psy8365 145 VAQNSYAVLWFKGKELNMVFGF-QLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLL 216 (381)
Q Consensus 145 ~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~ 216 (381)
.....+..+..|++.++...+. .+....+|..+++.+++.+.+.. ||+. .+...+++..+.+++
T Consensus 326 ~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~------G~~~--~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 326 VGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI------GFQG--AYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc------ccHH--HHHHHHHHHHHHHHH
Confidence 6667778888888888777665 56788999999999999999976 5676 566555544444433
No 168
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.29 E-value=1.4e-10 Score=108.36 Aligned_cols=132 Identities=8% Similarity=0.015 Sum_probs=98.1
Q ss_pred hhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhH-HHHHH
Q psy8365 54 SSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLF-ITILG 132 (381)
Q Consensus 54 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~ 132 (381)
....|.+.++.|.+....++......+...++.++.|+++|| +|||+.++.+.++.+++.+++......+... .....
T Consensus 291 ~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~ 369 (479)
T PRK10077 291 LYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDK-FGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLS 369 (479)
T ss_pred HHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-hcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHH
Confidence 344578888899888777777777888889999999999999 9999999999988888777654321112111 22233
Q ss_pred HHHHhccchh-hhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHH
Q psy8365 133 RFIFGIGGES-LAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLY 186 (381)
Q Consensus 133 r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 186 (381)
.++.+.+.+. ..+....+++|.+|+++|++++|+.+....+|..+++.+.+.+.
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 370 MLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred HHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 3444444333 23667899999999999999999999999999999877765554
No 169
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.27 E-value=1.6e-10 Score=104.98 Aligned_cols=131 Identities=12% Similarity=-0.022 Sum_probs=98.9
Q ss_pred HHHHhhhcCChHHHHHHHHHhhh-hhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHh-hh--ccchhHHHHHHH
Q psy8365 58 EHFTTDMHLTNAQYMNLYSWYSW-PNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFAL-GA--YVDSLFITILGR 133 (381)
Q Consensus 58 ~~~~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~l~~~r 133 (381)
+.+.+|.|.+++++|++...... ...++.++.|++.|| +|+|+.+..+..+.++..+.... .. ..++...+....
T Consensus 232 ~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (390)
T TIGR02718 232 KLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRR-AGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCS 310 (390)
T ss_pred hHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHH
Confidence 44556689999999999887764 666778999999999 99999988876655333322221 10 123344445555
Q ss_pred HHHhccchhhhhhhhhhhhhcccC-CcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 134 FIFGIGGESLAVAQNSYAVLWFKG-KELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 134 ~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
.+.+++.+...+...+...+..++ +++++.+++.+...++|..+||.+++.+.++.
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~ 367 (390)
T TIGR02718 311 AFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF 367 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666777777778888887777776 78999999999999999999999999999876
No 170
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.27 E-value=1.8e-10 Score=104.85 Aligned_cols=132 Identities=10% Similarity=0.076 Sum_probs=104.2
Q ss_pred hHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHH
Q psy8365 56 LEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFI 135 (381)
Q Consensus 56 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 135 (381)
..|.+.++.+.++.+.+++.+...++......+.+++.||.++.|+.+..+..+.+++.+++.. .++++.+.+..++
T Consensus 230 ~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~l 306 (400)
T PRK11646 230 MLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGM---VSNLQQLFTLICL 306 (400)
T ss_pred hhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHH
Confidence 3466656655578889998888777766666666666654166666677777777766654443 5778777778888
Q ss_pred HhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 136 FGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 136 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
.|++.+...|...+++.|..|+++||+.+|+.+....+|..+||.+++.+.++.+
T Consensus 307 ~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~ 361 (400)
T PRK11646 307 FYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGK 361 (400)
T ss_pred HHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHh
Confidence 8998888888889999999999999999999999999999999999999998764
No 171
>KOG0637|consensus
Probab=99.27 E-value=1.1e-10 Score=102.22 Aligned_cols=268 Identities=12% Similarity=0.156 Sum_probs=157.3
Q ss_pred HHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhh---cCchhhhHHHHHHH-HHHHH
Q psy8365 40 CLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRV---FGIRMGSTIYSVLV-VIGQL 115 (381)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~---~G~r~~~~~~~~~~-~~~~~ 115 (381)
+...+.-.+.+..--...+++.+++|++....+.+.....+...+.+++.|..+||+ +||||.++...... +++..
T Consensus 38 ~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~ 117 (498)
T KOG0637|consen 38 ASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLF 117 (498)
T ss_pred HHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHh
Confidence 333333344443333344567778999999999888888888899999999999953 89999887765544 34433
Q ss_pred HHHhhhccch-----------------hHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchH-HHHHHHHHHhHhhHh
Q psy8365 116 VFALGAYVDS-----------------LFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNM-VFGFQLSLSRVGSTV 177 (381)
Q Consensus 116 ~~~~~~~~~~-----------------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~g~~~ 177 (381)
+... +.+ ...++++--+.=+.....+.++-+++.|...++++.+ +++.+.....+|..+
T Consensus 118 Lig~---aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvL 194 (498)
T KOG0637|consen 118 LIGY---AADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVL 194 (498)
T ss_pred hhhh---HhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhccee
Confidence 3322 222 2334555555566666888889999999997766666 999999999999999
Q ss_pred hhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHH-----hhcccc-------hhhHHHhhhc--ccCcccc-
Q psy8365 178 NMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSL-----LLGCMD-------KRAERILNRR--NAGETEV- 242 (381)
Q Consensus 178 g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-------~~~~~~~~~~--~~~~~~~- 242 (381)
|..+++.. +|+-.+.|.........+..+-.. .+.... +++++...+. .+.+..+
T Consensus 195 GY~~g~y~----------~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~~~~~~~~~ 264 (498)
T KOG0637|consen 195 GYALGSYL----------GLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTTARSKSSKL 264 (498)
T ss_pred eeeccccc----------CceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCcccccccccCc
Confidence 98887732 333322232222211111111000 000000 0000000000 0000000
Q ss_pred ----cccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHh-cCCChhh---------------h-hhhHHHHHHH
Q psy8365 243 ----ARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKR-FNLDSDA---------------A-NRLNSIVYTI 301 (381)
Q Consensus 243 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~---------------~-~~~~~~~~~~ 301 (381)
.....+++.+|..|.+.+...+...+...+..|...++-+. ++-++.. . .+-..+..+.
T Consensus 265 ~~~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~ 344 (498)
T KOG0637|consen 265 PFLLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIV 344 (498)
T ss_pred chHHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHH
Confidence 01112333368889899999888888888777766666443 3333211 1 1234455666
Q ss_pred HhhhhhhHHHHHHhhcchH
Q psy8365 302 SAFLSPLMGLVVDKTGRNL 320 (381)
Q Consensus 302 ~~i~~~~~g~l~dr~g~r~ 320 (381)
..+.+....++.||+|-|+
T Consensus 345 lgi~S~~~~~l~~~~g~r~ 363 (498)
T KOG0637|consen 345 LGIYSLLVEKLSRKFGTRK 363 (498)
T ss_pred HHHHHHHHHHHHHhcCcce
Confidence 6777888889999999433
No 172
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.26 E-value=9.4e-11 Score=105.88 Aligned_cols=134 Identities=12% Similarity=0.117 Sum_probs=96.9
Q ss_pred HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHH--HHHHHHHHhhhccchhHHHHHHHHHH
Q psy8365 59 HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLV--VIGQLVFALGAYVDSLFITILGRFIF 136 (381)
Q Consensus 59 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~r~l~ 136 (381)
.+.+++|.++.+.++..+...++..++.++.|++.|| ..+|+......... ....+.........+.....+..++.
T Consensus 242 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (379)
T TIGR00881 242 YLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDK-LFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFAL 320 (379)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHH-HcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH
Confidence 4566789999999999999999999999999999998 74433222221111 11111111111123455556666777
Q ss_pred hccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchh
Q psy8365 137 GIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQT 199 (381)
Q Consensus 137 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~ 199 (381)
|+......+....+..|.+|+++|+++.++.+....+|..++|.+.+.+.++. |||+
T Consensus 321 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~------g~~~ 377 (379)
T TIGR00881 321 GFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGF------GWAG 377 (379)
T ss_pred HHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhh------cccc
Confidence 76655556666778899999999999999999999999999999999999876 5765
No 173
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.26 E-value=1.3e-10 Score=106.26 Aligned_cols=129 Identities=15% Similarity=-0.007 Sum_probs=103.3
Q ss_pred HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhh--ccchhHHHHHHHHHH
Q psy8365 59 HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGA--YVDSLFITILGRFIF 136 (381)
Q Consensus 59 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~ 136 (381)
.+.+++|.++.+.++......++..++.++.|++.|| +|+|+.+..+.++..++.++..... ..++.+.+.+..++.
T Consensus 241 ~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (406)
T PRK15402 241 ILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSR-RPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLY 319 (406)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHH
Confidence 3467789999999998888888889999999999999 9999999888887777666554421 124566778888899
Q ss_pred hccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 137 GIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 137 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
|++.+...+......... ++++||++.+..+....+|..+|+.+++.+.+..
T Consensus 320 g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~ 371 (406)
T PRK15402 320 AFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGG 371 (406)
T ss_pred HHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 999887777666655443 4589999999999999999999998888887654
No 174
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.24 E-value=1.2e-10 Score=101.29 Aligned_cols=149 Identities=15% Similarity=0.068 Sum_probs=108.2
Q ss_pred HHHHHhhhhhhcCchhhHH-HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHH
Q psy8365 40 CLLGFGSYFCYDNPSSLEE-HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFA 118 (381)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~ 118 (381)
++.++..+-....++...| +++++|+.++.+.|.....+.+...+..+.+|+++|| +|.+|++......++++..+..
T Consensus 224 sllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR-~Gg~rv~~~~f~~~~~~~~~l~ 302 (417)
T COG2223 224 SLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDR-IGGRRVTLAVFVGMALAAALLS 302 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhh-ccchhHHHHHHHHHHHHHHHHH
Confidence 3333333333333333334 6778999999999999999999999999999999999 9999999998888888777665
Q ss_pred hhhc----cchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 119 LGAY----VDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 119 ~~~~----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
.... ..+...+++.-+..++..|.....+..++..++| ++-|.+.|+.....++|...-|..-+...+..+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg 377 (417)
T COG2223 303 LFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG 377 (417)
T ss_pred ccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcc
Confidence 5210 0334444444444444444445566777788887 578999999999999999888877777777665
No 175
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.23 E-value=4.2e-10 Score=101.93 Aligned_cols=133 Identities=11% Similarity=0.077 Sum_probs=96.6
Q ss_pred HHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q psy8365 57 EEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIF 136 (381)
Q Consensus 57 ~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 136 (381)
.|.+.+.+|.++.+.+++.+...++..++.++.|++.|| +|+|+.+..+..+.+++.++... ..++.+...+..++.
T Consensus 223 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r-~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~ 299 (382)
T PRK10091 223 KPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGR-YSPLRIAAVTDFIIVLALLMLFF--FGGMKTASLIFAFIC 299 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccc-cCchhHHHHHHHHHHHHHHHHHH--HHhhHHHHHHHHHHH
Confidence 456777789999999999999999999999999999999 99999998888777776654432 134555556666666
Q ss_pred hccchhhhhhhhh-hhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchh
Q psy8365 137 GIGGESLAVAQNS-YAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQT 199 (381)
Q Consensus 137 G~~~~~~~~~~~~-~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~ 199 (381)
+.+.....+.... ...+..+++.++... .+....+|..+||.+++.+.+... +|++
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~~-----~~~~ 356 (382)
T PRK10091 300 CAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLGL-----AYNY 356 (382)
T ss_pred HHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHccc-----Ccch
Confidence 6665444444343 334444445555443 466778999999999999988543 5676
No 176
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.23 E-value=7.3e-11 Score=105.51 Aligned_cols=126 Identities=21% Similarity=0.248 Sum_probs=108.9
Q ss_pred chhhHHHH-HhhhcCC-hHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHH
Q psy8365 53 PSSLEEHF-TTDMHLT-NAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITI 130 (381)
Q Consensus 53 ~~~~~~~~-~~~~~~s-~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 130 (381)
.....|.+ .+++|.+ ..+.+...+...+...++.++.|++.|| +|+|+..........++.+........++....+
T Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (352)
T PF07690_consen 225 FSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDR-FGRRRRLLIAILLLILGALGLLLLPFSSSPVWLI 303 (352)
T ss_dssp HHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHH
T ss_pred hhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 45555664 8899999 8999999999999999999999999999 9998888887777777766665544445677778
Q ss_pred HHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhh
Q psy8365 131 LGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNM 179 (381)
Q Consensus 131 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 179 (381)
..-++.|++.+...+....++.|.+|+++||++.|+.+...++|..+||
T Consensus 304 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 304 IALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 8888999999999999999999999999999999999999999999886
No 177
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.22 E-value=3.5e-10 Score=101.44 Aligned_cols=131 Identities=10% Similarity=0.024 Sum_probs=102.0
Q ss_pred hhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhc-CchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHH
Q psy8365 55 SLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVF-GIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGR 133 (381)
Q Consensus 55 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~-G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r 133 (381)
...|.+.++.|.+..+.+.+.+...++..++.++.|++.|| + +||+.+..+.++.+++.+.+.. .++..... .-
T Consensus 218 ~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~ 292 (355)
T TIGR00896 218 GWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARR-VKDQRGIVAVLAVLQLVGLCGLLF---APMHGLWA-WA 292 (355)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhh-hccchHHHHHHHHHHHHHHHHHHH---hhhhHHHH-HH
Confidence 34566667789999999999999999999999999999999 9 5666666777777666654544 22222222 35
Q ss_pred HHHhccchhhhhhhhhhhhhccc-CCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 134 FIFGIGGESLAVAQNSYAVLWFK-GKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 134 ~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
.+.|++.+...+...+.+.+..+ +++++...++.+....+|..++|.+.+.+.++.+
T Consensus 293 ~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 293 LVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 67899988888887777765554 5667899999988888999999999999998875
No 178
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.22 E-value=4.5e-10 Score=102.48 Aligned_cols=131 Identities=15% Similarity=0.170 Sum_probs=92.7
Q ss_pred HHHHhhhcCChHHHHHHHHHhh-hhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhcc-chhHHHHHHHH-
Q psy8365 58 EHFTTDMHLTNAQYMNLYSWYS-WPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYV-DSLFITILGRF- 134 (381)
Q Consensus 58 ~~~~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~- 134 (381)
+.+.+++|.++++.+++.+... .+..++.++.|++.|| +|+|+.+..+..+..+..+.+...+.. ++.+.+.+.-+
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r-~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 312 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVR-LGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGI 312 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 5677789999999999986654 5688999999999999 999998877776666554433322223 45565555554
Q ss_pred ---HHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchh
Q psy8365 135 ---IFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQT 199 (381)
Q Consensus 135 ---l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~ 199 (381)
..|++.+...+....++.+.+|.+++ ++.+...++|..+++.+++.+.+.. ||+.
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~------G~~~ 370 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAY------GWPG 370 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHh------ChHH
Confidence 44555566666777777777775544 5555556677776677899998887 6887
No 179
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.22 E-value=6.7e-10 Score=100.12 Aligned_cols=143 Identities=15% Similarity=0.154 Sum_probs=115.0
Q ss_pred hhhhcCchhhHHHHHhhhc-CChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccch
Q psy8365 47 YFCYDNPSSLEEHFTTDMH-LTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDS 125 (381)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~-~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (381)
......+....+...+|.| .+....+.+.+...+.-++.-...+++..| +|.|+++.++.+..++=..+++.. +++
T Consensus 220 ~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r-~g~~~ll~~a~~~~~vR~~l~a~~--~~~ 296 (400)
T PF03825_consen 220 GISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKR-FGIKWLLLLALVAYAVRWLLYAYF--SDP 296 (400)
T ss_pred HHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHh--cCC
Confidence 3333334444455666777 777888888888888888999999999999 999999999999988887766652 244
Q ss_pred hHHH----HHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHH-HhHhhHhhhhhhHHHHhhhhcc
Q psy8365 126 LFIT----ILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSL-SRVGSTVNMFVAEPLYKYVEKF 192 (381)
Q Consensus 126 ~~~l----~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~~l~~~~~~~ 192 (381)
.+.. +++..++|+..+..+.+...++.+..|++.|+++.++++.. .++|..+|..++|.+.++.+.+
T Consensus 297 ~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~ 368 (400)
T PF03825_consen 297 WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGAR 368 (400)
T ss_pred cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcch
Confidence 4433 33456799999999999999999999999999999998764 6799999999999999988755
No 180
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.21 E-value=5.9e-10 Score=102.65 Aligned_cols=128 Identities=10% Similarity=0.015 Sum_probs=83.2
Q ss_pred HHH-HHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHh-hhccchhHHHHHHHH
Q psy8365 57 EEH-FTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFAL-GAYVDSLFITILGRF 134 (381)
Q Consensus 57 ~~~-~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~ 134 (381)
.|. +.+++|.+..+.+...+...+...+++++.|+++|| +|||+.+....++.++....... ....++....+..-.
T Consensus 266 lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (432)
T PRK10406 266 MQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDK-IGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVM 344 (432)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 344 556789999999998888888888999999999999 99999887765544333321211 111223332222222
Q ss_pred HHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhH-hhHhhhhhhHHH
Q psy8365 135 IFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRV-GSTVNMFVAEPL 185 (381)
Q Consensus 135 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l 185 (381)
+.+.+.+...+....+.+|++|+|.|+.+.|+.+...+. .....|.+.+.+
T Consensus 345 ~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l 396 (432)
T PRK10406 345 CALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL 396 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH
Confidence 222333334445667889999999999999998766553 233466666643
No 181
>PRK10054 putative transporter; Provisional
Probab=99.20 E-value=4.9e-10 Score=101.82 Aligned_cols=125 Identities=17% Similarity=0.106 Sum_probs=104.0
Q ss_pred hhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccch
Q psy8365 62 TDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGE 141 (381)
Q Consensus 62 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 141 (381)
++.+.+....++..+...+.....+++.|++.|| +++|+.+..+..+..++....... .++.+.+++..++.|+|.+
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~ 313 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNA-ANIRPLMTAGTLCFVIGLVGFIFS--GNSLLLWGMSAAVFTVGEI 313 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHcc-CCchhHHHHHHHHHHHHHHHHHHc--chHHHHHHHHHHHHHHHHH
Confidence 4556677788888888888888888999999999 999999988887777776655431 3577777788899999988
Q ss_pred hhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 142 SLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
...|.....+.+..|++.|++..+..+ ...+|..+||.+++.+.++.+
T Consensus 314 ~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g 361 (395)
T PRK10054 314 IYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLP 361 (395)
T ss_pred HHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcC
Confidence 888888899999999999999998765 455899999999999999875
No 182
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.20 E-value=1.1e-09 Score=100.58 Aligned_cols=140 Identities=15% Similarity=0.028 Sum_probs=117.1
Q ss_pred CchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCch--hhhHHHHHHHHHHHHHHHh-----hhccc
Q psy8365 52 NPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIR--MGSTIYSVLVVIGQLVFAL-----GAYVD 124 (381)
Q Consensus 52 ~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r--~~~~~~~~~~~~~~~~~~~-----~~~~~ 124 (381)
..........+++|++..+...+.-...+...++++++|++.|| +|.| +++..+..+..+-.+.-.+ ..-.+
T Consensus 300 i~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r-~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~ 378 (477)
T PF11700_consen 300 IISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR-FGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLK 378 (477)
T ss_pred HHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcc
Confidence 44444456677999999999999999999999999999999999 9999 8888777766433332111 00046
Q ss_pred hhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcc
Q psy8365 125 SLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKF 192 (381)
Q Consensus 125 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 192 (381)
+-+.+++.-++.|+..|..++...++.+|..|+++.+..+|++....-....+||++-+.+.+..++.
T Consensus 379 ~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~ 446 (477)
T PF11700_consen 379 SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQ 446 (477)
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 77889999999999999999999999999999999999999999999999999999999999888643
No 183
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.18 E-value=2e-09 Score=94.13 Aligned_cols=120 Identities=14% Similarity=0.095 Sum_probs=96.6
Q ss_pred hcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhh
Q psy8365 64 MHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESL 143 (381)
Q Consensus 64 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 143 (381)
+|.++++.+...+.+..+..++.+..+++.|| +|+||.+.++..+.+++.++... .++... ...-.+.|++.+..
T Consensus 173 ~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r-~g~~~~l~~~~~l~~~~~~l~~~---~~~~~~-~~~~~l~g~~~s~i 247 (310)
T TIGR01272 173 LGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPM-ISQGRYLAFNAFLAVLLSIGAAL---THGYVA-MWFVLALGLFNSIM 247 (310)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHH---cCCHHH-HHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999 99999988887777776654433 233322 34555789999999
Q ss_pred hhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 144 AVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 144 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
+|...+...+..|+ +.+.+.++. ....+|..+.|.+.|.+.+..+
T Consensus 248 ~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g 292 (310)
T TIGR01272 248 FPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLG 292 (310)
T ss_pred HHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhcc
Confidence 99999999888874 455666665 5566899999999999988764
No 184
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.16 E-value=7.9e-10 Score=102.91 Aligned_cols=133 Identities=13% Similarity=0.081 Sum_probs=102.3
Q ss_pred HHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhh--ccchhHHHHHHHHH
Q psy8365 58 EHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGA--YVDSLFITILGRFI 135 (381)
Q Consensus 58 ~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l 135 (381)
+++.+...-++...+++.+...++..++.+++++++|| +|+|+.+..+..+.+++.+...... ..++.+.+++.-++
T Consensus 255 ~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 333 (473)
T PRK10429 255 IYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKS-LSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGIL 333 (473)
T ss_pred eeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHH
Confidence 34444433356677777777778889999999999999 9999999888877666655443311 13566777777888
Q ss_pred Hhccchhhhhhhhhhhhhccc-------CCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhc
Q psy8365 136 FGIGGESLAVAQNSYAVLWFK-------GKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEK 191 (381)
Q Consensus 136 ~G~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 191 (381)
.|++.+...+...++++|..| .++.|..++.......+|..+++.+.+.+.+..+.
T Consensus 334 ~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 334 LNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 899999999998999999865 33456689999999999999999999998876654
No 185
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.16 E-value=2.1e-09 Score=97.65 Aligned_cols=129 Identities=8% Similarity=0.090 Sum_probs=102.1
Q ss_pred HHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q psy8365 57 EEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIF 136 (381)
Q Consensus 57 ~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 136 (381)
.|.+.+++|.++.+.+.+.....++..++.++.|++.|| .++|.... +..+..+....... ..++.+.+.+..++.
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r-~~~~~l~~-~~~~~~~~~~~l~~--~~~~~~~~~~~~~l~ 315 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKR-SVKLALAG-APLVLAVSALVLTL--WGSDKIVATGVAIIW 315 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHH-HHHHHHHHHHHHHH--HhhhHHHHHHHHHHH
Confidence 467778899999999999999999999999999999999 76554443 33333333222222 246777888888999
Q ss_pred hccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 137 GIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 137 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
|++.+...+..++++.+..| +++++..+......++|..+|+.+++.+.+..+
T Consensus 316 G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g 368 (394)
T PRK10213 316 GLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIG 368 (394)
T ss_pred HHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99988888888888998887 667788888888999999999999999998763
No 186
>KOG2504|consensus
Probab=99.15 E-value=3.5e-10 Score=104.60 Aligned_cols=167 Identities=19% Similarity=0.246 Sum_probs=135.4
Q ss_pred HHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCch--hhhHHHHHHHHH
Q psy8365 35 ALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIR--MGSTIYSVLVVI 112 (381)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r--~~~~~~~~~~~~ 112 (381)
.+.+..+......+........+|.+.++.+.++.+.+.+.++..+...++.+..|+++|+ ...| ....++.+..++
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~-~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADK-PGIRALVLFLLTLLIAGL 377 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCc-cccchHHHHHHHHHHHHH
Confidence 4455555666677777788888899999999999999999999999999999999999999 7743 344445555544
Q ss_pred HHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcc
Q psy8365 113 GQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKF 192 (381)
Q Consensus 113 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 192 (381)
+.. +.++.++++.+...-.+.|++.|........++.|..+.++-..+.|+......++.++||++++.+.+..++
T Consensus 378 ~~~---~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~- 453 (509)
T KOG2504|consen 378 ARL---FLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGN- 453 (509)
T ss_pred HHH---HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCC-
Confidence 443 3345899999999999999999988888888999999999999999999999999999999999988877653
Q ss_pred ccccchhhHHHHHHHHHHHH
Q psy8365 193 GLIGYQTLGIVLLLAGMTCV 212 (381)
Q Consensus 193 ~~~gWr~~~~~~~~~~~~~~ 212 (381)
|.. .++..++...+
T Consensus 454 ----Y~~--~f~~~g~~~~~ 467 (509)
T KOG2504|consen 454 ----YDH--AFYFCGLCFLL 467 (509)
T ss_pred ----eee--ehhhcChHHHH
Confidence 444 46655553333
No 187
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.15 E-value=5.3e-10 Score=104.71 Aligned_cols=132 Identities=14% Similarity=0.065 Sum_probs=110.4
Q ss_pred hHHH-HHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHh-hhccchhHHHHHHH
Q psy8365 56 LEEH-FTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFAL-GAYVDSLFITILGR 133 (381)
Q Consensus 56 ~~~~-~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r 133 (381)
..|. +++.+|.++.+.++......++..++.++.|++.|| +|||+.+..+..+.+++..+... .....+++.+....
T Consensus 277 ~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (485)
T TIGR00711 277 LLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDK-IDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQ 355 (485)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHH
Confidence 3454 455689999999999999999999999999999999 99999999888888777765542 11134566777778
Q ss_pred HHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhh
Q psy8365 134 FIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKY 188 (381)
Q Consensus 134 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (381)
++.|++.+...+.......+..|+++|+.+.++.+....+|..+|+.+.+.+.++
T Consensus 356 ~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 356 FIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999998888887777778889999999999999999999999999998888764
No 188
>PRK09848 glucuronide transporter; Provisional
Probab=99.15 E-value=5.7e-10 Score=103.26 Aligned_cols=129 Identities=12% Similarity=-0.002 Sum_probs=102.3
Q ss_pred HHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhcc
Q psy8365 60 FTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIG 139 (381)
Q Consensus 60 ~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 139 (381)
+++.+|.++...++......++..++.++.+++.|| +|+|+.+.++.++..++.+...+. ..++++.+.+..++.|+|
T Consensus 255 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r-~g~~~~~~~g~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~g~G 332 (448)
T PRK09848 255 VRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVAR-IGKKNTFLIGALLGTCGYLLFFWV-SVWSLPVALVALAIASIG 332 (448)
T ss_pred EeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHc-CchhHHHHHHHHHHHHHH
Confidence 344567666555555555567778899999999999 999999999988888777655542 124677777788889999
Q ss_pred chhhhhhhhhhhhhcccCC-------cchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 140 GESLAVAQNSYAVLWFKGK-------ELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
.+...+...++.+|..|.+ ++|...++.+....+|..+|+.+.+.+.+..+
T Consensus 333 ~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 333 QGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999998888654 35999999999999999999999998877654
No 189
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.14 E-value=9e-10 Score=103.15 Aligned_cols=129 Identities=12% Similarity=0.049 Sum_probs=111.0
Q ss_pred HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhc
Q psy8365 59 HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGI 138 (381)
Q Consensus 59 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 138 (381)
++++.+|.|+.+.|.......++..++.++.|++.|| +|+|+.+..+.++.+++..++......++.+......++.|+
T Consensus 285 ~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~ 363 (495)
T PRK14995 285 ELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSR-LGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGF 363 (495)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Confidence 5566789999999999999999999999999999999 999999888888877776655432233566667778899999
Q ss_pred cchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhh
Q psy8365 139 GGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKY 188 (381)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (381)
|.+...+.....+.+..|+++++.+.++.+...++|..+|+.+.+.+.++
T Consensus 364 g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 364 SAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred hHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888889999999999999999999999999999999888663
No 190
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.13 E-value=2.5e-09 Score=97.26 Aligned_cols=123 Identities=13% Similarity=0.036 Sum_probs=83.8
Q ss_pred HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhc
Q psy8365 59 HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGI 138 (381)
Q Consensus 59 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 138 (381)
.+++++|.++.+.+.+.+...++..++.++.+++.|| +|||+.+..+..+..++.+.... .++.+.....-.+.+.
T Consensus 229 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~ 304 (392)
T PRK10473 229 LLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGI-FKPRTLMLTSQVLFLAAGITLAL---SPSHAVSLFGITLICA 304 (392)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 4567889999999999999999999999999999999 99999999988887777665554 3334333444444444
Q ss_pred cchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 139 GGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
|.+...+.. ...+..|.++|+ +.......++..+++.+++.+.+..+
T Consensus 305 g~~~~~~~~--~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g 351 (392)
T PRK10473 305 GFSVGFGVA--MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLG 351 (392)
T ss_pred HHHHHhHHH--HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 433333322 223444544443 33344456677777777778877664
No 191
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.12 E-value=5.5e-10 Score=103.94 Aligned_cols=139 Identities=17% Similarity=0.151 Sum_probs=88.4
Q ss_pred HHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchh-----hhHHHHHHHHHHHHHHHhhhccchhHHHHHH
Q psy8365 58 EHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRM-----GSTIYSVLVVIGQLVFALGAYVDSLFITILG 132 (381)
Q Consensus 58 ~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 132 (381)
+.+.+++|.+..+.+.+.+...++..++.+++|+++|| +|||+ .... .....++.+.+......++.+...+.
T Consensus 277 ~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~~~r~~~~~r~~~~-~~~~~l~~i~~~~~~~~~~~~~~~~~ 354 (476)
T PLN00028 277 EYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDV-AARRFGMRGRLWAL-WIVQTLGGVFCIWLGRANSLGAAIVV 354 (476)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HHHhcCcchhHHHH-HHHHHHHHHHHHHhcccchHHHHHHH
Confidence 34567789999999999999999999999999999999 98762 1111 11122222111122234566655556
Q ss_pred HHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHH
Q psy8365 133 RFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAG 208 (381)
Q Consensus 133 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~ 208 (381)
.++.+++.+.......++..+..| ++||...|+.+.+..+|..+++. +....+. .+|+. .++..++
T Consensus 355 ~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~----l~~~~~~---~~y~~--~f~~~~~ 420 (476)
T PLN00028 355 MILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQL----LFFTGSS---YSTET--GISLMGV 420 (476)
T ss_pred HHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHH----HHHhcCC---ccHhh--HHHHHHH
Confidence 666666655555556666666654 78999999987766666666554 3332111 15776 5555554
No 192
>KOG0569|consensus
Probab=99.12 E-value=2.6e-09 Score=96.81 Aligned_cols=140 Identities=15% Similarity=0.146 Sum_probs=106.2
Q ss_pred hcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhH--
Q psy8365 50 YDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLF-- 127 (381)
Q Consensus 50 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 127 (381)
..........+-++-|++..+.-+..........+..+.+..+.|| +|||+.++.+..++.+..+++....+..+..
T Consensus 286 i~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~-~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~ 364 (485)
T KOG0569|consen 286 INAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDR-LGRRPLLLISLSLMAVALLLMSIALFLSNSFGS 364 (485)
T ss_pred cceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3445555567888889999999999999999999999999999999 9999999999999988877766533322222
Q ss_pred ----HHHHHHHHHhccchh-hhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 128 ----ITILGRFIFGIGGES-LAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 128 ----~l~~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
..+++.++..++.+. ..|...-+.+|.+|++.|+.+.++......+...+-...-..+.+..+
T Consensus 365 ~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g 432 (485)
T KOG0569|consen 365 WLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG 432 (485)
T ss_pred HHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 123444444444333 356677888899999999999999999888888776666666666554
No 193
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.11 E-value=4e-10 Score=101.10 Aligned_cols=117 Identities=16% Similarity=0.153 Sum_probs=94.4
Q ss_pred hhHHHHHhhhcCChHHHHHHHHHhh-hhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhh-cc-------ch
Q psy8365 55 SLEEHFTTDMHLTNAQYMNLYSWYS-WPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGA-YV-------DS 125 (381)
Q Consensus 55 ~~~~~~~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~-~~-------~~ 125 (381)
...|.+.+++|.++++.+.+.+... ++..++.+++|++.|| +|||+.+..+.++.+++..+..... .. ++
T Consensus 230 ~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (356)
T TIGR00901 230 VLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQP-LNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPH 308 (356)
T ss_pred HHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccch
Confidence 3445555669999999998887665 5778999999999999 9999998888887776655443311 11 45
Q ss_pred hHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHh
Q psy8365 126 LFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSR 172 (381)
Q Consensus 126 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 172 (381)
.+.+....++.+++.+...+...+++.|.+|+|+||+.+++.++..+
T Consensus 309 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 309 LLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 67788888999999999999999999999999999999999887654
No 194
>PRK09669 putative symporter YagG; Provisional
Probab=99.10 E-value=3e-09 Score=98.37 Aligned_cols=122 Identities=11% Similarity=0.007 Sum_probs=94.9
Q ss_pred hHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhh
Q psy8365 68 NAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQ 147 (381)
Q Consensus 68 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 147 (381)
++..+.+.....+...++.+++++++|| +|+|+.+..+.+..++..+..... ..++.+.+++..++.|++.+...+..
T Consensus 263 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gk~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~ 340 (444)
T PRK09669 263 PDLATLFLVTGMIAGLFGALLSERLLGK-FDRVRAFKWTIVAFVILSALIFFI-PPSNVWLIFALNILFNFIQNLTTPLQ 340 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556666677788888999999999 999999988877665443322221 14577778888899999999999999
Q ss_pred hhhhhhcccC-------CcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhc
Q psy8365 148 NSYAVLWFKG-------KELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEK 191 (381)
Q Consensus 148 ~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 191 (381)
.++++|..|. ++.|...+..+....+|..+|+.+++.+.+..+.
T Consensus 341 ~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 341 WSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999988852 2346778999999999999999999999887654
No 195
>PRK11043 putative transporter; Provisional
Probab=99.10 E-value=3.6e-09 Score=96.54 Aligned_cols=129 Identities=11% Similarity=0.022 Sum_probs=99.1
Q ss_pred HHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhh--ccchhHHHHHHHH
Q psy8365 57 EEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGA--YVDSLFITILGRF 134 (381)
Q Consensus 57 ~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~ 134 (381)
.|.+.+++|.++.+.|+......++..++.+..+++.|| +|+|+.........+++.+.+.... ..++.+.+++...
T Consensus 226 ~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (401)
T PRK11043 226 SPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQK-WGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFC 304 (401)
T ss_pred hHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHH
Confidence 466677889999999998888888999999999999999 9999877665555544433322211 1345556666677
Q ss_pred HHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHh
Q psy8365 135 IFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYK 187 (381)
Q Consensus 135 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (381)
+.|++.+..++.......|..| ++||++.++.+.....+...++.+.+.+.+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 305 VMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 8888888888888887777776 689999999999888888888888887765
No 196
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.10 E-value=4.4e-09 Score=96.74 Aligned_cols=148 Identities=14% Similarity=0.116 Sum_probs=119.5
Q ss_pred HHHhhhhhhcCchhhHHHHHhh-hcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhh
Q psy8365 42 LGFGSYFCYDNPSSLEEHFTTD-MHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALG 120 (381)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~ 120 (381)
..+.............+++.++ +| ++...+.+..+..++..++.+++++++|| +|+|+.+..+.++.+++.+...+.
T Consensus 233 ~~~~~~~~~~~~~~~~~y~~~~vl~-~~~~~~~~~~~~~~~~~v~~~~~~~l~~r-~gk~~~~~~~~~~~~~~~~~~~~~ 310 (428)
T PF13347_consen 233 AFFLQWLAFALMNTFLPYYFTYVLG-NEGLISIFMLIFFVASIVGSPLWGRLSKR-FGKKKVYIIGLLLAALGFLLLFFL 310 (428)
T ss_pred HHHHHHhhhhhhhhHHHHHHHHHhc-CchhhHHHHHHHHHHHHHHHHHHHHHHHH-ccceeehhhhHHHHHHHHHHHHHH
Confidence 3444444555555555666555 45 44678888889999999999999999999 999999999999999888877663
Q ss_pred hccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccC-------CcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcc
Q psy8365 121 AYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKG-------KELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKF 192 (381)
Q Consensus 121 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 192 (381)
.. +|.+.+++.-++.|++.+..++...++++|..+. ++.|..++..+....+|..+++.+.+.+.+..+..
T Consensus 311 ~~-~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 311 GP-GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred Hh-hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 21 5899999999999999999999999999998863 34588999999999999999999999888766543
No 197
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.09 E-value=1.6e-09 Score=98.39 Aligned_cols=123 Identities=11% Similarity=-0.083 Sum_probs=99.7
Q ss_pred HHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHh
Q psy8365 58 EHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFG 137 (381)
Q Consensus 58 ~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 137 (381)
+.+++.+|.++.+.|++.+...++..++++..+++.|| .++|+.+..+.. .++...... +.++++...+..++.|
T Consensus 230 ~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~-~~~~~~~~~g~~-~~~~~~~~~---~~~~~~~~~~~~~~~G 304 (393)
T PRK11195 230 AWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTL-ETVLRVLPAGIL-MGLVVLLMA---LQHSLLPAYPLLILIG 304 (393)
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcC-CcccchHHHHHH-HHHHHHHHH---HHhHHHHHHHHHHHHH
Confidence 35667789999999999999999999999999999999 999988777743 333322222 2567777777888899
Q ss_pred ccchhhhhhhhhhhhhcccCCc-chHHHHHHHHHHhHhhHhhhhhhHHH
Q psy8365 138 IGGESLAVAQNSYAVLWFKGKE-LNMVFGFQLSLSRVGSTVNMFVAEPL 185 (381)
Q Consensus 138 ~~~~~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~~~~~l 185 (381)
++.+...+...+.+.+..|++. +|++.++.+...++|..++..+.+.+
T Consensus 305 ~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~ 353 (393)
T PRK11195 305 ALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL 353 (393)
T ss_pred HhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH
Confidence 9988888888888888766554 79999999999999999999888755
No 198
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.09 E-value=2.7e-09 Score=99.34 Aligned_cols=164 Identities=13% Similarity=0.086 Sum_probs=99.5
Q ss_pred HHHHHHHHhhhhhhcCchhhHH-HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhh--------HHHH
Q psy8365 37 LLMCLLGFGSYFCYDNPSSLEE-HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGS--------TIYS 107 (381)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~--------~~~~ 107 (381)
....+..+.............| .+.+++|.+..+.++..+...++..++.++.|+++|| +++|+.. ..+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~ 342 (465)
T TIGR00894 264 WAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADF-LKSSKTLSLTAARKIFNGI 342 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCcHHHHHHHHHHH
Confidence 3334444444433333333445 4566789999999999999999999999999999999 8755321 1111
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHh
Q psy8365 108 VLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYK 187 (381)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (381)
.....+...+.......+....++.-.+.+.+.+...+.......|..| +.+|.+.++.+....+|..++|.+.+.+.+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~ 421 (465)
T TIGR00894 343 GGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILS 421 (465)
T ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeC
Confidence 1111111111111112344444444455555544445555455557666 589999999999999999999988887765
Q ss_pred hhhccccccchhhHHHHHHH
Q psy8365 188 YVEKFGLIGYQTLGIVLLLA 207 (381)
Q Consensus 188 ~~~~~~~~gWr~~~~~~~~~ 207 (381)
..+.. +|+. .+.+.+
T Consensus 422 ~~~~~---~~~~--~f~~~~ 436 (465)
T TIGR00894 422 QDSKN---VWLI--VFLIMA 436 (465)
T ss_pred CCCch---HHHH--HHHHHH
Confidence 43211 4666 444443
No 199
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.08 E-value=2.1e-09 Score=95.52 Aligned_cols=142 Identities=17% Similarity=0.230 Sum_probs=116.8
Q ss_pred cCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhh
Q psy8365 65 HLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLA 144 (381)
Q Consensus 65 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 144 (381)
+.++...|.+.+...+.-++...+..++.+| +|.|+.++++..++++=.+.+++ +++.+.+.+.+.+.|+-.+...
T Consensus 255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~r-ig~k~~Lllag~i~~iRi~~~~~---~~~~~~i~~~klLH~~e~~l~l 330 (412)
T PF01306_consen 255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINR-IGAKNLLLLAGVIMAIRIIGSGF---ATNPWVISLIKLLHALEFPLLL 330 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHT-----SHHHHHHHHHHHHHHHHHHH
T ss_pred ccChhHHhHHHHHHHHHHHHHHHHHHHHHHh-cChHhHHHHHHHHHHHHHHHHhh---hcchHHHHHHHHHHHHHHHHHH
Confidence 3456678999999999999999999999999 99999999999998888776655 8999999999999999999999
Q ss_pred hhhhhhhhhcccCCcchHHHHHH-HHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHH
Q psy8365 145 VAQNSYAVLWFKGKELNMVFGFQ-LSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCS 218 (381)
Q Consensus 145 ~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~ 218 (381)
.+...|+++.+|+|-.++...+. +....+|..+.+.++|.+.++.+ .+. .+++++.+.....++..
T Consensus 331 va~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G------~~~--tylimg~iv~~~~li~~ 397 (412)
T PF01306_consen 331 VAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG------FQH--TYLIMGLIVLPFTLISA 397 (412)
T ss_dssp HHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH------HHH--HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC------cHH--HHHHHHHHHHHHHHHhe
Confidence 99999999999988877887774 67888999999999999999985 343 57777765544444443
No 200
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.07 E-value=5e-08 Score=92.97 Aligned_cols=136 Identities=16% Similarity=0.251 Sum_probs=110.7
Q ss_pred hhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccc-----hhHH
Q psy8365 54 SSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVD-----SLFI 128 (381)
Q Consensus 54 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 128 (381)
..+..++.+.+|.++++...+...+....-+..+++|+++|+++|+++.+.++.++..+|.++.++.+..+ ....
T Consensus 8 aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 34455677789999999988888888888889999999999989999999999999999988776643211 1234
Q ss_pred HHHHHHHHhccchhhhhhhhhhhhhcccCC---cchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 129 TILGRFIFGIGGESLAVAQNSYAVLWFKGK---ELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 129 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
.+++-.+..+|.|++-+...+...|.++++ +|-..+.++..+.++|..+++.+.+.+.+..
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~ 151 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDV 151 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 667788889999999999999999999754 3667888888999999999988888876543
No 201
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.06 E-value=5.1e-09 Score=94.91 Aligned_cols=122 Identities=17% Similarity=0.251 Sum_probs=94.8
Q ss_pred HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhcc--chhHHHHHHHHHH
Q psy8365 59 HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYV--DSLFITILGRFIF 136 (381)
Q Consensus 59 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~ 136 (381)
.+.+++|.++.+.+++.+...++..++.++.|++.|| +|+|+.+..+..+..++.+++...... ++...+....++.
T Consensus 232 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (385)
T TIGR00710 232 VYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKK-WGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFV 310 (385)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 4556889999999999999999999999999999999 999999888877777766655442211 3445556667788
Q ss_pred hccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhH-hhHhhhhhh
Q psy8365 137 GIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRV-GSTVNMFVA 182 (381)
Q Consensus 137 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~ 182 (381)
|++.+...+.......|..| ++|+++.++.+..... |.+.++.++
T Consensus 311 g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 311 GIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888888888888876 7899999998877654 455555433
No 202
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.05 E-value=3.2e-09 Score=98.01 Aligned_cols=129 Identities=10% Similarity=0.107 Sum_probs=84.7
Q ss_pred HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHH---HHHHHHhhhccchhHHHHHHHHH
Q psy8365 59 HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVI---GQLVFALGAYVDSLFITILGRFI 135 (381)
Q Consensus 59 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~r~l 135 (381)
.+++..|.++.+.++....+.++..++.+..|+++|| +++|+....+.....+ +.+.+... ...+.+......+.
T Consensus 277 ~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 354 (438)
T TIGR00712 277 YLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFKGNRGATGVFFMTLVTIAVIVYWMN-PAGNPLVDMICMIV 354 (438)
T ss_pred HHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcccHHHHHHHHHHHHHHHHHHhc-CCCchHHHHHHHHH
Confidence 4445579999999999999999999999999999999 9754432333222211 11111111 11233333334444
Q ss_pred HhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHh-hHhhhhhhHHHHhhh
Q psy8365 136 FGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVG-STVNMFVAEPLYKYV 189 (381)
Q Consensus 136 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g-~~~g~~~~~~l~~~~ 189 (381)
.|++.............|.+|+++|+.+.|+.+....+| ..++|.+.+.+.++.
T Consensus 355 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~ 409 (438)
T TIGR00712 355 IGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF 409 (438)
T ss_pred HHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhc
Confidence 454322222222345679999999999999998887776 578999999998876
No 203
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.04 E-value=4.2e-09 Score=91.89 Aligned_cols=131 Identities=17% Similarity=0.180 Sum_probs=114.6
Q ss_pred HHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHh
Q psy8365 58 EHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFG 137 (381)
Q Consensus 58 ~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 137 (381)
..-.+++|++..++.++.....+..+++++++|++.|| +|.|+++..+.++..+.++...+ ...-..+.+.-.+.|
T Consensus 277 ~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~r-fg~k~vl~~~lvi~~~~~~~~~~---~~~~~~f~i~gll~g 352 (438)
T COG2270 277 VFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDER-FGSKPVLMIGLVILSIAALYLIF---LEGELDFWILGLLVG 352 (438)
T ss_pred HHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCceeehHHHHHHHHHHHHHHH---ccccHHHHHHHHHHH
Confidence 34456999999999999999999999999999999999 99999999998888777664444 344555666778889
Q ss_pred ccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcc
Q psy8365 138 IGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKF 192 (381)
Q Consensus 138 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 192 (381)
...|..+....++..+..|+++-++.+|+++.....+..+||.+-+.+.+..++.
T Consensus 353 ~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~ 407 (438)
T COG2270 353 TSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSS 407 (438)
T ss_pred HhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcch
Confidence 9999999999999999999999999999999999999999999999888877643
No 204
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.04 E-value=6.6e-09 Score=107.64 Aligned_cols=126 Identities=17% Similarity=0.107 Sum_probs=109.5
Q ss_pred HHHHhhhcCChH-HHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q psy8365 58 EHFTTDMHLTNA-QYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIF 136 (381)
Q Consensus 58 ~~~~~~~~~s~~-~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 136 (381)
+.+.+++|.+.. +.+++.+...++..+++++.|++.|| +++|+.+.++.++.+++.+++.. ..+.+.+++..++.
T Consensus 257 ~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 332 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGR-HIELGLVPLGALGLALSLFLLPT---APSLASVLVLFFLF 332 (1146)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceEccchhHHHHHHHHHHHHHHH---hhhHHHHHHHHHHH
Confidence 456677899999 99999999999999999999999999 99999888888777776665554 56888888889999
Q ss_pred hccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHh
Q psy8365 137 GIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYK 187 (381)
Q Consensus 137 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (381)
|++.+...+...+++.+..|+++||+++++.+....+|.++++.+++.+..
T Consensus 333 g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 333 GFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999898888999999999999999999999999999999888877766543
No 205
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.03 E-value=3.8e-09 Score=96.61 Aligned_cols=147 Identities=14% Similarity=0.076 Sum_probs=96.4
Q ss_pred HhhhhhhcCchhhHHHHHhhh--cCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhh-HHHHHHHHHHHHHHHhh
Q psy8365 44 FGSYFCYDNPSSLEEHFTTDM--HLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGS-TIYSVLVVIGQLVFALG 120 (381)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~--~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~-~~~~~~~~~~~~~~~~~ 120 (381)
+.............|.+.+++ +.++.+.+...+...++..++.+..|+++|| +++|+.. ....+...++.. ...
T Consensus 252 ~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr-~~~r~~~~~~~~~~~~~~~~-~~~- 328 (412)
T TIGR02332 252 FCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDR-LKERKHHTALPYLFAAAGWL-LAS- 328 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcc-cCccHHHHHHHHHHHHHHHH-HHH-
Confidence 333333334445566666664 5678889999999999999999999999999 9987753 333333333322 221
Q ss_pred hccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchh
Q psy8365 121 AYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQT 199 (381)
Q Consensus 121 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~ 199 (381)
. .++....+..-.+.+++.....+.......|.+|+++|+.++|+.+....+|..++|.+.+.+.+..+ +|++
T Consensus 329 ~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g-----~~~~ 401 (412)
T TIGR02332 329 A-TDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG-----SFNS 401 (412)
T ss_pred h-cCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC-----CCch
Confidence 1 22222222222233333222233334455678899999999999999999999999999999888664 4776
No 206
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.01 E-value=6.4e-07 Score=80.76 Aligned_cols=328 Identities=11% Similarity=0.055 Sum_probs=169.3
Q ss_pred HHHHHhhhhhhcCchhhHHHHHhhhcC-ChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHH----H
Q psy8365 40 CLLGFGSYFCYDNPSSLEEHFTTDMHL-TNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIG----Q 114 (381)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~----~ 114 (381)
....+......-++....+.+..+..- +---.+...-.-.+..++.++..|.+.|| ..|.+....+.+..-++ +
T Consensus 8 y~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~-~~Rl~~~~~~l~~Qn~sv~~s~ 86 (432)
T PF06963_consen 8 YLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDR-SPRLKVIRTSLVVQNLSVAASC 86 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhC-CcchhhHHHHHHHHHHHHHHHH
Confidence 334444444444555555666555532 32233333344455667888999999999 99988877665544222 2
Q ss_pred HHHHhh-hccc-------hhHHHHHHHHHHhccchhhhhh-hhhhhhhcc------cCCcchHHHHHHHHHHhHhhHhhh
Q psy8365 115 LVFALG-AYVD-------SLFITILGRFIFGIGGESLAVA-QNSYAVLWF------KGKELNMVFGFQLSLSRVGSTVNM 179 (381)
Q Consensus 115 ~~~~~~-~~~~-------~~~~l~~~r~l~G~~~~~~~~~-~~~~i~~~~------~~~~r~~~~~~~~~~~~~g~~~g~ 179 (381)
.++... ...+ ....+++.-.+.|.-.-..... ..++=.||. +++.+.+.++...-.=-+..+++|
T Consensus 87 ~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaP 166 (432)
T PF06963_consen 87 ALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAP 166 (432)
T ss_pred HHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 222110 0001 1122222222222221222222 223333664 344566677777667777889999
Q ss_pred hhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhc----ccch-----hhHHHhhhcccCc------cc---
Q psy8365 180 FVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLG----CMDK-----RAERILNRRNAGE------TE--- 241 (381)
Q Consensus 180 ~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~------~~--- 241 (381)
++.|.+.+..+ .+. ...++++ .-++++..=.++. ...| ++++..+.+++++ ++
T Consensus 167 l~vG~l~t~~s------~~~--~~~~i~~-~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (432)
T PF06963_consen 167 LFVGLLMTFAS------PVI--AAIFIAG-WNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSI 237 (432)
T ss_pred HHHHHHhhccC------HHH--HHHHHHH-HHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhH
Confidence 99999987664 222 2222222 1112211111110 0001 0000000000000 00
Q ss_pred -----------ccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHH
Q psy8365 242 -----------VARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMG 310 (381)
Q Consensus 242 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g 310 (381)
...|+...+ .+.+...+...+.++...++......|+... |+++...|..-+...+.++.+..+..
T Consensus 238 ~~~~~~~~~~~~~~w~~Y~~--q~vflas~alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p 314 (432)
T PF06963_consen 238 LKRLWNPLRTIIRGWRTYFR--QPVFLASFALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYP 314 (432)
T ss_pred HHHHHHHHHHHhccHHHHHh--CHHHHHHHHHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012333333 3344455555555555667777788888875 99999999999999999999999999
Q ss_pred HHHHhhcchHHHHHHH---HHHHHHHHHHHhhcc---chhHHHHHHHHHHHH---h--hhcchhhhhhhcccCCcccccc
Q psy8365 311 LVVDKTGRNLFWVFIS---LMVSIVCHFMVGHTM---IDPHITMVMMGIAYS---M--VASGLWPLIALVIPEYQLGTAY 379 (381)
Q Consensus 311 ~l~dr~g~r~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~---~--~~~~~~~~~~~~~p~~~~g~~~ 379 (381)
++.+|+|..+.-.... ..+...+...+.... .......++.|+..+ . +--....+.+|.+|+++||+..
T Consensus 315 ~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~ 394 (432)
T PF06963_consen 315 WLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVS 394 (432)
T ss_pred HHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHH
Confidence 9999999655422221 111111222221111 122222233333322 2 3355577899999999999877
Q ss_pred c
Q psy8365 380 G 380 (381)
Q Consensus 380 g 380 (381)
|
T Consensus 395 g 395 (432)
T PF06963_consen 395 G 395 (432)
T ss_pred H
Confidence 6
No 207
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.01 E-value=9.4e-09 Score=96.59 Aligned_cols=134 Identities=9% Similarity=-0.029 Sum_probs=86.7
Q ss_pred hhhHHHHHhhhcCChHHHHH------------HHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhh
Q psy8365 54 SSLEEHFTTDMHLTNAQYMN------------LYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGA 121 (381)
Q Consensus 54 ~~~~~~~~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~ 121 (381)
....|.+.++.|.+..+.+. ......++..++.++.++++|| +|||+.++.+..+.+++..+.....
T Consensus 308 ~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr-~gRR~~l~~~~~~~~~~~~~l~~~~ 386 (502)
T TIGR00887 308 NLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDI-IGRKPIQLMGFFILTVLFFVLGFAY 386 (502)
T ss_pred ccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcchhHHHHHHHHHHHHHHHHHHHH
Confidence 33356777777776432111 1233445666788899999999 9999998888777766655443311
Q ss_pred cc-chhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhh
Q psy8365 122 YV-DSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKY 188 (381)
Q Consensus 122 ~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (381)
.. ++...+...-+...++.....+....+.+|.+|.+.|+++.++.+....+|..+++.+.+.+.+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 454 (502)
T TIGR00887 387 NHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQH 454 (502)
T ss_pred HhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcc
Confidence 00 11111111111111211223445567779999999999999999999999999999999888764
No 208
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.01 E-value=1.4e-08 Score=91.91 Aligned_cols=122 Identities=9% Similarity=0.025 Sum_probs=85.8
Q ss_pred HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhh-ccchhHHHHHHHHHHh
Q psy8365 59 HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGA-YVDSLFITILGRFIFG 137 (381)
Q Consensus 59 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~r~l~G 137 (381)
.+.+++|.++.+.++..+...++..++.++.|++.|| +|||+.+..+..+..+..+...... ...+++...++-.+.+
T Consensus 220 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (377)
T PRK11102 220 VYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRR-VGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFV 298 (377)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 4566789999999999999999999999999999999 9999998888766544433322211 1234555555555555
Q ss_pred ccchhhhhhhhhhhhhcccCCcchHHHHHHHHH-HhHhhHhhhhhh
Q psy8365 138 IGGESLAVAQNSYAVLWFKGKELNMVFGFQLSL-SRVGSTVNMFVA 182 (381)
Q Consensus 138 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~ 182 (381)
.+.+.........+.|..| ++|+++.++.+.. ..+|..+++.++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 299 GCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred HHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 5545555566667777766 8899999887654 345555555443
No 209
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.98 E-value=9.2e-09 Score=106.34 Aligned_cols=128 Identities=11% Similarity=0.002 Sum_probs=106.6
Q ss_pred HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhh-----------------h
Q psy8365 59 HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALG-----------------A 121 (381)
Q Consensus 59 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~-----------------~ 121 (381)
.+.+.+|.++.+.|++.+.+.++..+++++.|++.|| .++++.+..+.++.+++.+.+.+. .
T Consensus 251 ~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 329 (1140)
T PRK06814 251 LAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEG-RITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFL 329 (1140)
T ss_pred HHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhh
Confidence 4556689999999999999999999999999999998 888776666665555544433321 0
Q ss_pred ccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHh
Q psy8365 122 YVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYK 187 (381)
Q Consensus 122 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (381)
..++.+.+.+..++.|++.+...+...+++.+.+|+++||+++|..+....+|..+++++.+.+..
T Consensus 330 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 330 SKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 126778888889999999999999999999999999999999999999999999999999888864
No 210
>KOG4332|consensus
Probab=98.97 E-value=1.3e-09 Score=88.84 Aligned_cols=296 Identities=13% Similarity=0.106 Sum_probs=162.6
Q ss_pred HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhc
Q psy8365 59 HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGI 138 (381)
Q Consensus 59 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 138 (381)
.+-+.++..+.|+|.+.-...-...+...+.|.++|| -|||+.-+.- ++-.++++..-.++.|-.++++|.+-|+
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDk-qGRKracvty----citYiLsCiTKhSpqYkVLmVGR~LGGi 136 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTY----CITYILSCITKHSPQYKVLMVGRVLGGI 136 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhh-hccccceeee----hHHHHHHHHhhcCCceEEEeehhhhhhH
Confidence 4556788889999998888888888999999999999 9999964444 4444445555568999999999999999
Q ss_pred cchhhhhhhhhhhh-hcccCCcchHHHHHHHH--------HHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHHH
Q psy8365 139 GGESLAVAQNSYAV-LWFKGKELNMVFGFQLS--------LSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGM 209 (381)
Q Consensus 139 ~~~~~~~~~~~~i~-~~~~~~~r~~~~~~~~~--------~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~ 209 (381)
..+..+.+-.++.. |.. ++|+.-.-+... ++.+-.+++.+.+..+.++++.. .-. .+..+
T Consensus 137 aTsLLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slG----PVA---PFdAA-- 205 (454)
T KOG4332|consen 137 ATSLLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLG----PVA---PFDAA-- 205 (454)
T ss_pred HHHHHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccC----CCC---chHHH--
Confidence 98888877666544 443 344443222222 22233344444455555555432 111 11111
Q ss_pred HHHHHHHHHHhhc-cc----chhhHHHhhhcccCcccccccccccccCcchhhHHHHHHHhhhhhhcc-hhhHHHHHHHh
Q psy8365 210 TCVLSLLCSLLLG-CM----DKRAERILNRRNAGETEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPF-VSLAQELFVKR 283 (381)
Q Consensus 210 ~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 283 (381)
.+.+++-..+.+. +. +|.+++... .+-+...+.+.. ++++.++.....+.-...+.+ ..|.|..--+.
T Consensus 206 acfLaigmAvil~~W~ENygdps~~kdll-----tqf~gaa~aiaS-D~ki~LLG~iqsLFE~smytFVFLWTPaLspn~ 279 (454)
T KOG4332|consen 206 ACFLAIGMAVILSSWSENYGDPSENKDLL-----TQFKGAARAIAS-DEKIALLGAIQSLFEGSMYTFVFLWTPALSPND 279 (454)
T ss_pred HHHHHHHHHHHHhhhhhccCChhhhHHHH-----HHhhHhHHHHhc-chHHHHHHHHHHHHhhhhheeeeeecccCCCCc
Confidence 2222322222221 11 111111000 011111222333 455555444444443333333 34544321111
Q ss_pred cCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchH-HHHHHHHHHHHHHHHHHh--h-------ccchhHHHHHHHHH
Q psy8365 284 FNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNL-FWVFISLMVSIVCHFMVG--H-------TMIDPHITMVMMGI 353 (381)
Q Consensus 284 ~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~g~ 353 (381)
...--|.+.+.....+++|+-+..++..|-..|. ..+.......+..+.+.. . ++....+...++-.
T Consensus 280 ---e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~ 356 (454)
T KOG4332|consen 280 ---EEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEA 356 (454)
T ss_pred ---ccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHH
Confidence 1223477888888888888887777666543222 222222222222222222 1 11223455556666
Q ss_pred HHHhhhcchhhhhhhcccCCcccccc
Q psy8365 354 AYSMVASGLWPLIALVIPEYQLGTAY 379 (381)
Q Consensus 354 ~~~~~~~~~~~~~~~~~p~~~~g~~~ 379 (381)
+.+...|...-+-.+..|++.|++.+
T Consensus 357 cvGlfwPSimkmRsqyIPEearstim 382 (454)
T KOG4332|consen 357 CVGLFWPSIMKMRSQYIPEEARSTIM 382 (454)
T ss_pred HHhhcchHHHHHHHhhCCHHHHhhhh
Confidence 77778888888889999998887754
No 211
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.97 E-value=1.4e-08 Score=92.41 Aligned_cols=136 Identities=13% Similarity=0.060 Sum_probs=88.2
Q ss_pred chhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhh-c--cchhHHH
Q psy8365 53 PSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGA-Y--VDSLFIT 129 (381)
Q Consensus 53 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~l 129 (381)
++...|.+.++ ..+............+...+..+++|+++|| +|+||++.++.+...++........ . ..+++.+
T Consensus 271 ~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADR-iG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~ 348 (462)
T PRK15034 271 FSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDK-FGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAF 348 (462)
T ss_pred HHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHh-cCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHH
Confidence 34344444433 2233333333444567778889999999999 9999999988887776654322211 0 1356666
Q ss_pred HHHHHHHhccchhhhhhhhhhhhhcccC---------------------CcchHHHHHHHHHHhHhhHhhhhhhHHHHhh
Q psy8365 130 ILGRFIFGIGGESLAVAQNSYAVLWFKG---------------------KELNMVFGFQLSLSRVGSTVNMFVAEPLYKY 188 (381)
Q Consensus 130 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~---------------------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (381)
.+..+...++.|....+...++.+.+|+ ++-|.+.|+......+|..+-|.+-+...+.
T Consensus 349 ~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~ 428 (462)
T PRK15034 349 YAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNM 428 (462)
T ss_pred HHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHH
Confidence 6665555555555566666777777763 1566788888888889888888777777666
Q ss_pred hh
Q psy8365 189 VE 190 (381)
Q Consensus 189 ~~ 190 (381)
.+
T Consensus 429 ~g 430 (462)
T PRK15034 429 TG 430 (462)
T ss_pred cC
Confidence 54
No 212
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.96 E-value=4.2e-08 Score=88.24 Aligned_cols=142 Identities=12% Similarity=0.087 Sum_probs=112.8
Q ss_pred hhcCchhhHHHHH-hhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhH
Q psy8365 49 CYDNPSSLEEHFT-TDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLF 127 (381)
Q Consensus 49 ~~~~~~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (381)
.....+....++. .-+|.++.+..+.......+..++.+++.++.+| +|+|+++.++.++.+++.++..+.+ .++..
T Consensus 251 ~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~-~gkk~~~~~~~~~~~i~~~~~~f~~-~~~~~ 328 (467)
T COG2211 251 AFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKK-FGKKKLFLIGLLLLAVGYLLLYFTP-AGSVV 328 (467)
T ss_pred HHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hchHHHHHHHHHHHHHHHHHHHhhc-CcchH
Confidence 3333333333333 3456667777778888888888889999999999 9999999999999999999888755 57889
Q ss_pred HHHHHHHHHhccchhhhhhhhhhhhhcccC-------CcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcc
Q psy8365 128 ITILGRFIFGIGGESLAVAQNSYAVLWFKG-------KELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKF 192 (381)
Q Consensus 128 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 192 (381)
..++..++.++|.+...+...++++|..+- ++-|...+......-+|..++..+.+++++..+..
T Consensus 329 l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gyv 400 (467)
T COG2211 329 LIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGYV 400 (467)
T ss_pred HHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999998887642 33477888888888899999998888888776543
No 213
>TIGR00898 2A0119 cation transport protein.
Probab=98.95 E-value=6.5e-09 Score=97.91 Aligned_cols=117 Identities=19% Similarity=0.153 Sum_probs=88.2
Q ss_pred hhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccch
Q psy8365 62 TDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGE 141 (381)
Q Consensus 62 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 141 (381)
++++.+..... ....+...++.++.+++.|| +|||+.+.++.++.+++.++..... ..+.+...+..++.+++.+
T Consensus 351 ~~~~~~~~~~~---~~~~~~~i~~~~~~~~l~dr-~grr~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~ 425 (505)
T TIGR00898 351 GNLGGNIYLDL---FISGLVELPAKLITLLLIDR-LGRRYTMAASLLLAGVALLLLLFVP-VDLYFLRTALAVLGKFGIT 425 (505)
T ss_pred cccCCChHHHH---HHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHcC-CCchHHHHHHHHHHHHHHH
Confidence 34444433332 34445667788899999999 9999999998888877766555421 1122445555566677777
Q ss_pred hhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhH
Q psy8365 142 SLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAE 183 (381)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 183 (381)
..++....+..|.+|++.|+.++|+.+....+|.+++|.+.+
T Consensus 426 ~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 426 SAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred HHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH
Confidence 778888899999999999999999999999999999998887
No 214
>PRK10133 L-fucose transporter; Provisional
Probab=98.95 E-value=3.3e-08 Score=91.01 Aligned_cols=126 Identities=13% Similarity=0.026 Sum_probs=99.2
Q ss_pred HHH-HhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q psy8365 58 EHF-TTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIF 136 (381)
Q Consensus 58 ~~~-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 136 (381)
+++ ++.+|.++.+.++....+.++..++.++.|++.|| +|+|+++..+..+.+++.++... .++. .-+..-.+.
T Consensus 283 ~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r-~g~~~~l~~~~~~~~~~~~~~~~---~~~~-~~~~~~~l~ 357 (438)
T PRK10133 283 RYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISR-FAPHKVLAAYALIAMALCLISAF---AGGH-VGLIALTLC 357 (438)
T ss_pred HHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHH---cCCh-HHHHHHHHH
Confidence 343 45789999999999999999999999999999999 99999988887776655544333 3443 224566788
Q ss_pred hccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 137 GIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 137 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
|++.+..+|...+...|..| ++.+.+.++..+ ..+|..++|.+.+.+.+..+
T Consensus 358 glg~~~i~P~~~s~a~~~~~-~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g 409 (438)
T PRK10133 358 SAFMSIQYPTIFSLGIKNLG-QDTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAG 409 (438)
T ss_pred HHHHHHHHHHHHHHHHcccc-hhhccchhHHhH-HhccchHHHHHHHHHHHhcc
Confidence 99999999999999999887 456777777764 44678888888888887653
No 215
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.93 E-value=1e-08 Score=94.32 Aligned_cols=128 Identities=16% Similarity=0.272 Sum_probs=96.9
Q ss_pred CcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhh-cchHHHHHHHHHHH
Q psy8365 252 PVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKT-GRNLFWVFISLMVS 330 (381)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~~~ 330 (381)
++.++.+....+...+.++++..++|.|+++.+|+++.+++...+.......++.+++|+++||+ |||+.+........
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~ 87 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMA 87 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHH
Confidence 57788888888888889999999999999998999999999999999999899999999999999 99988555544444
Q ss_pred HHHHHHHhhcc---chhHHHHHHHHHHHHhhhcchhhhhhhcccCC--ccccccc
Q psy8365 331 IVCHFMVGHTM---IDPHITMVMMGIAYSMVASGLWPLIALVIPEY--QLGTAYG 380 (381)
Q Consensus 331 ~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~--~~g~~~g 380 (381)
++..++.... ......+.+..++.+...+...++..|.+|++ +|+++.+
T Consensus 88 -lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~ 141 (493)
T PRK15462 88 -IGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFS 141 (493)
T ss_pred -HHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceeh
Confidence 3333333211 12233344455666666677788999999875 5776655
No 216
>KOG3098|consensus
Probab=98.91 E-value=7.3e-08 Score=86.73 Aligned_cols=296 Identities=9% Similarity=0.056 Sum_probs=166.3
Q ss_pred HHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhc
Q psy8365 75 YSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLW 154 (381)
Q Consensus 75 ~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 154 (381)
.++.+..+.++.++.+.+.|+ .|+|+.++++......-.+.+.. .|-+.++.+-.+.|+|.+..+...-.+++|.
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~-i~~K~~lv~ga~~y~~f~~gfl~----~N~y~~yfssallG~Gaallw~GqG~ylt~~ 130 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNF-LGPKWALVIGATCYAAFPLGFLF----PNSYYLYFSSALLGFGAALLWTGQGGYLTSN 130 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHH-hhHHHHHHHHhHHHHHHHHHHHh----cchHHHHHHHHHhhhhHHheecccceehhhc
Confidence 567777888999999999999 99999999999998877766654 6788889999999999999999999999999
Q ss_pred ccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhcccc--ccch-h--------hHHHHHHHHHHHHHHHHHHHhhcc
Q psy8365 155 FKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGL--IGYQ-T--------LGIVLLLAGMTCVLSLLCSLLLGC 223 (381)
Q Consensus 155 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~--~gWr-~--------~~~~~~~~~~~~~~~~~~~~~~~~ 223 (381)
.+++++.+..++.......+.++|..+...+..+.+.... .+-+ + +....+.++ .+.+..+..+...+
T Consensus 131 st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v-~~~~~~l~~i~~~~ 209 (461)
T KOG3098|consen 131 STRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGV-LLAISVLSIINFDF 209 (461)
T ss_pred CChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHH-HHHHHHHHhhheee
Confidence 9999999999999888888888876554443322221100 0111 0 001111111 11122222211111
Q ss_pred cchhhHHHhhhcccCccccccccccccc--CcchhhHHHHHHHhhhhhhcchhhHHHHHHHh--cCCCh-hhhhhhHHHH
Q psy8365 224 MDKRAERILNRRNAGETEVARLSDVKHF--PVSFWMVVVIIVSYYTSIFPFVSLAQELFVKR--FNLDS-DAANRLNSIV 298 (381)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~-~~~~~~~~~~ 298 (381)
.+.+.... .++..++......+...+. +++...+....+.............|..+.-. .+.+. ...+......
T Consensus 210 ~p~~~~~~-~~~~~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~ 288 (461)
T KOG3098|consen 210 LPSKDVVN-CKSSSETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGI 288 (461)
T ss_pred cCccchhh-hhhhccccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHH
Confidence 11111111 1111111111122222221 46666555555444333333333333322221 22222 2334444455
Q ss_pred HHHHhhhhhhHHHHHHhh---cchHHHHHHHHHHHHHHHHHHhh-ccc------------------hhHHHHHHHHHHHH
Q psy8365 299 YTISAFLSPLMGLVVDKT---GRNLFWVFISLMVSIVCHFMVGH-TMI------------------DPHITMVMMGIAYS 356 (381)
Q Consensus 299 ~~~~~i~~~~~g~l~dr~---g~r~~~~~~~~~~~~~~~~~~~~-~~~------------------~~~~~~~~~g~~~~ 356 (381)
+.+.+++....+.+.||. |+++.......+....+.+.... +.. ...+...+.|++-.
T Consensus 289 g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~ 368 (461)
T KOG3098|consen 289 GLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDA 368 (461)
T ss_pred hHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHH
Confidence 667777777777777665 45555333333333333333221 100 12233456677777
Q ss_pred hhhcchhhhhhhcccCCccccc
Q psy8365 357 MVASGLWPLIALVIPEYQLGTA 378 (381)
Q Consensus 357 ~~~~~~~~~~~~~~p~~~~g~~ 378 (381)
......+.++.+..|++ |.++
T Consensus 369 ~~~t~~~~ii~~~~~~~-~~~~ 389 (461)
T KOG3098|consen 369 CFNTQRYVIIALLYPDD-RAQA 389 (461)
T ss_pred HHHHHHHHHHHHHhcCc-hHHH
Confidence 88888899999988554 4443
No 217
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.89 E-value=8.4e-08 Score=83.82 Aligned_cols=146 Identities=22% Similarity=0.305 Sum_probs=118.0
Q ss_pred hhhcCchhhHHHHHhhhcCCh--HHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccch
Q psy8365 48 FCYDNPSSLEEHFTTDMHLTN--AQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDS 125 (381)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (381)
.+........+.+.++++.+. .+.++..+.+.++..+++++.|.+.|| +|||+.+..+.....++.+....... .+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~~-~~ 93 (338)
T COG0477 16 LDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDR-YGRRKVLIIGLLLFLLGTLLLALAPN-VG 93 (338)
T ss_pred HhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhcccc-ccchHHHHHHHHHHHHHHHHHHhCcc-ch
Confidence 555666667778888887666 588999999999999999999999999 99998888877665555444444211 35
Q ss_pred hHHHHHHHHHHhccchhhhhhhhhhhhhcccC-CcchHHHHHHHH-HHhHhhHhhhhhhHHHHhhhhccccccchh
Q psy8365 126 LFITILGRFIFGIGGESLAVAQNSYAVLWFKG-KELNMVFGFQLS-LSRVGSTVNMFVAEPLYKYVEKFGLIGYQT 199 (381)
Q Consensus 126 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~ 199 (381)
.+.+.+.|..+|++.+...+...+++.|+.|+ ++|+...+.... ...+|..+++.+++.+... ... +||+
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~ 165 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA-LLW---GWRA 165 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc---chHH
Confidence 89999999999999999999999999999997 678999999888 5888999999888777766 322 7887
No 218
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.89 E-value=1.2e-08 Score=94.81 Aligned_cols=128 Identities=9% Similarity=0.132 Sum_probs=99.8
Q ss_pred CcchhhHHHHHHHhhhhhhcchhhHHHHHHHh--cCCChhhhhhhHHHHHHHHhhhhhhHHHHHHh-hcchHHHHHHHHH
Q psy8365 252 PVSFWMVVVIIVSYYTSIFPFVSLAQELFVKR--FNLDSDAANRLNSIVYTISAFLSPLMGLVVDK-TGRNLFWVFISLM 328 (381)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~g~r~~~~~~~~~ 328 (381)
++.++.+.+..++...++++...++|.|+++. +|++..+++...+...+...++.+++|+++|| +|||+.+......
T Consensus 9 p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~ 88 (475)
T TIGR00924 9 PKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIV 88 (475)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHH
Confidence 57778888888888899999999999999887 89999999999999999999999999999999 7999985554444
Q ss_pred HHHHHHHHHhhcc--chhHHHHHHHHHHHHhhhcchhhhhhhcccCCc---cccccc
Q psy8365 329 VSIVCHFMVGHTM--IDPHITMVMMGIAYSMVASGLWPLIALVIPEYQ---LGTAYG 380 (381)
Q Consensus 329 ~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~---~g~~~g 380 (381)
. .++..+..... +...+...+.+++.+...+...++..|.+|+++ |+++.+
T Consensus 89 ~-~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~ 144 (475)
T TIGR00924 89 L-MLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFT 144 (475)
T ss_pred H-HHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceeh
Confidence 3 44444444422 233445556777777778888899999998754 666654
No 219
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.88 E-value=1.6e-06 Score=79.16 Aligned_cols=269 Identities=12% Similarity=0.027 Sum_probs=148.2
Q ss_pred HHHHhhhcC-----ChHHHHHHHHHhhhhhhHH-hhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhc--cc-----
Q psy8365 58 EHFTTDMHL-----TNAQYMNLYSWYSWPNVIC-CFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAY--VD----- 124 (381)
Q Consensus 58 ~~~~~~~~~-----s~~~~g~~~s~~~~~~~~~-~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~--~~----- 124 (381)
-.+++.+.+ +.+.+.++-+...+...+. .++.+++++| ++|++.+-.....+.....++++.-. .+
T Consensus 27 R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~-~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~ 105 (472)
T TIGR00769 27 RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNI-LSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPT 105 (472)
T ss_pred HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCc
Confidence 456666655 4467899999887877766 8899999999 99999888766666554444433100 00
Q ss_pred ---------------------hhHHHHHHHHHHhccchhhhh-hhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhh
Q psy8365 125 ---------------------SLFITILGRFIFGIGGESLAV-AQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVA 182 (381)
Q Consensus 125 ---------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 182 (381)
+.|...+..+...+-...... .-..+.+|.++.+|-.|..++...+.++|..+++.+.
T Consensus 106 ~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~ 185 (472)
T TIGR00769 106 ALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTI 185 (472)
T ss_pred HHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122233333344444333443 5668899999999999999999999999999999888
Q ss_pred HHHHhhhhc--cccccchhhH-HHHHHHHHHHHHHHHHHHhhcccchhhHH--H---hhhcccCcccc----cccccccc
Q psy8365 183 EPLYKYVEK--FGLIGYQTLG-IVLLLAGMTCVLSLLCSLLLGCMDKRAER--I---LNRRNAGETEV----ARLSDVKH 250 (381)
Q Consensus 183 ~~l~~~~~~--~~~~gWr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~----~~~~~~~~ 250 (381)
..+.+.... .....|.... ....+.++. .++.....++.++...+ . .++++++++++ .+.+.+.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~k~k~~~~es~k~i~~ 262 (472)
T TIGR00769 186 KYFSKLRASLGPGVDGWHVSLKNLMVIVICS---GLAIILLYWWVNRNVLTDPRSYNPALKEKKVKPKMSTMESLKFLVS 262 (472)
T ss_pred HHHHHhhhccccccChHHHHHHHHHHHHHHH---HHHHHHHHHHHHhcccCCccccchhhccccCCCCCCHHHHHHHHHh
Confidence 777643211 0111342210 011111111 11112122121111100 0 00011111122 23444555
Q ss_pred cCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhh---hhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHH
Q psy8365 251 FPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDA---ANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISL 327 (381)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~ 327 (381)
+|-++.+.+...++....+....-.-....+.+.-+.+. .|......++..++..++.+++.+|+|-+....+.-.
T Consensus 263 -S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pi 341 (472)
T TIGR00769 263 -SPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPL 341 (472)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 676666666666666555555543344455544322222 2333444455555666677899999987766555444
Q ss_pred HHHH
Q psy8365 328 MVSI 331 (381)
Q Consensus 328 ~~~~ 331 (381)
++.+
T Consensus 342 i~li 345 (472)
T TIGR00769 342 VMLL 345 (472)
T ss_pred HHHH
Confidence 4433
No 220
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.86 E-value=4.9e-08 Score=88.87 Aligned_cols=125 Identities=14% Similarity=0.093 Sum_probs=93.4
Q ss_pred HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhh--ccchhHHHHHHHHHH
Q psy8365 59 HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGA--YVDSLFITILGRFIF 136 (381)
Q Consensus 59 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~ 136 (381)
.+++.+|.++.+.+++.....++..+++++.+++.|| ++++... ......++.+...... ...+.+.+....++.
T Consensus 233 ~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (394)
T PRK11652 233 LMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKR-FSTLMWQ--SVICCLLAGLLMWIPGWFGVMNVWTLLVPAALF 309 (394)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 4555589999999999988889999999999999999 8843322 2222222222221111 124566778888999
Q ss_pred hccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHh
Q psy8365 137 GIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYK 187 (381)
Q Consensus 137 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (381)
|++.+...+...++..|.+| ++++...++.+....+|..+++.+++.+..
T Consensus 310 ~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 310 FFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 99999999999999999887 688999999999999999998888776643
No 221
>KOG0253|consensus
Probab=98.83 E-value=2.4e-08 Score=85.42 Aligned_cols=98 Identities=14% Similarity=0.169 Sum_probs=77.5
Q ss_pred hhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchh--HHHHHHHHHHhccchhhhhhhhhhhhhccc
Q psy8365 79 SWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSL--FITILGRFIFGIGGESLAVAQNSYAVLWFK 156 (381)
Q Consensus 79 ~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 156 (381)
.+.-..|.++.+++.|| +|||+.+....+++++..++...+- .+|. .++..+|++.. +.+...+.|..|.+|
T Consensus 391 slaefPGlLIt~~iver-lGRKkTMal~l~~f~iflfll~~c~-~rn~~tvllf~arafis----g~fqvaYvYtPEVyP 464 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVER-LGRKKTMALSLILFGIFLFLLTTCK-TRNAYTVLLFTARAFIS----GAFQVAYVYTPEVYP 464 (528)
T ss_pred HHhhCCchhHHHHHHHH-hcchhHHHHHHHHHHHHHHHHHHhc-CcchhHHHHHHHHHHHh----chheEEEEecCcccc
Confidence 34556788899999999 9999999999999988877665521 2222 22345565543 346677899999999
Q ss_pred CCcchHHHHHHHHHHhHhhHhhhhhh
Q psy8365 157 GKELNMVFGFQLSLSRVGSTVNMFVA 182 (381)
Q Consensus 157 ~~~r~~~~~~~~~~~~~g~~~g~~~~ 182 (381)
.+.|+...|..+....+|.++.|+++
T Consensus 465 TavRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 465 TAVRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred hhhhhcchhhhhhHHhhhhhhhhHHH
Confidence 99999999999999999999999988
No 222
>PRK11462 putative transporter; Provisional
Probab=98.83 E-value=1.6e-07 Score=87.00 Aligned_cols=122 Identities=12% Similarity=0.037 Sum_probs=83.4
Q ss_pred ChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhh
Q psy8365 67 TNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVA 146 (381)
Q Consensus 67 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 146 (381)
++...+.+.+.+.++..++.+++++++|| +|+|+.+..+..+..+..++..+.+ ..+...+++.-++.|++.+...+.
T Consensus 261 ~~~~~~~~l~~~~i~~iig~~l~~~l~~r-~gkk~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~l 338 (460)
T PRK11462 261 TPEVFVAFLTTYCVGNLIGSALAKPLTDW-KCKVTIFWWTNALLAVISLAMFFVP-MQASITMFVFIFVIGVLHQLVTPI 338 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHhc-hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455667778888889999999999999 9999987755554444333332211 122333444556668776666666
Q ss_pred hhhhhhhccc-------CCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 147 QNSYAVLWFK-------GKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 147 ~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
..++++|..+ .++.|...+.......+|..+++.+++.+++..+
T Consensus 339 ~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 339 QWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred HHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 6677777665 2333555677778888999999999998887654
No 223
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.81 E-value=2.2e-08 Score=90.11 Aligned_cols=126 Identities=20% Similarity=0.298 Sum_probs=93.3
Q ss_pred cchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHH
Q psy8365 253 VSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIV 332 (381)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 332 (381)
+++|...+..+..+........+.|.++++++|.|+.+.++..+...++..++.++.|++.||+|||+.+........ +
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~-i 79 (366)
T TIGR00886 1 RNLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLA-I 79 (366)
T ss_pred CchHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH-H
Confidence 346677777777777777888888877888899999999999999999999999999999999999998655444443 3
Q ss_pred HHHHHhhcc---chhHHHHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 333 CHFMVGHTM---IDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 333 ~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
+..+..+.. +...+..++.|++.+. .+...+++.|.+|+++|+++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~ 129 (366)
T TIGR00886 80 PCLWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALG 129 (366)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHH
Confidence 333333322 2233444555665443 3455788999999999998765
No 224
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.80 E-value=4e-08 Score=91.13 Aligned_cols=128 Identities=10% Similarity=-0.025 Sum_probs=109.7
Q ss_pred hhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhh--hc-----cchhHHHHHHHH
Q psy8365 62 TDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALG--AY-----VDSLFITILGRF 134 (381)
Q Consensus 62 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~l~~~r~ 134 (381)
+.+|.++.+.|.+.....++..++....+++.+| ++.|+++.++.++.+++.+..... .. .++.+..+..-+
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~-~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKT-FPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 5789999999999999999999999999999999 999999999998888776543210 00 134445566678
Q ss_pred HHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 135 IFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 135 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
+.+++.+....+...++.+..|++++|...++.++..++|..+++.+++.+.++.+
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88999899999999999999999999999999999999999999999999998876
No 225
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.79 E-value=4e-08 Score=91.50 Aligned_cols=128 Identities=16% Similarity=0.197 Sum_probs=98.5
Q ss_pred CcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHh-hcchHHHHHHHHHHH
Q psy8365 252 PVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDK-TGRNLFWVFISLMVS 330 (381)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~g~r~~~~~~~~~~~ 330 (381)
+|.+|.+....+...+.+++...+++.|+++.+|.+..++............+..+++|+++|| +|||+.+.....+..
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~ 92 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLA 92 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHH
Confidence 6778888888888889999999999999999999999999888888887778888899999999 999999666555554
Q ss_pred HHHHHHHhhcc-ch-hHHHHHHHHHHHHhhhcchhhhhhhcccCCc--ccccc
Q psy8365 331 IVCHFMVGHTM-ID-PHITMVMMGIAYSMVASGLWPLIALVIPEYQ--LGTAY 379 (381)
Q Consensus 331 ~~~~~~~~~~~-~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~--~g~~~ 379 (381)
+..+....... .. ..+...+.+++.+...|...+++.|.+|+++ |++++
T Consensus 93 ~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~ 145 (489)
T PRK10207 93 IGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAF 145 (489)
T ss_pred HHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcch
Confidence 44333322211 22 3345666788888888888999999998874 35443
No 226
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.77 E-value=2e-07 Score=81.76 Aligned_cols=131 Identities=15% Similarity=0.236 Sum_probs=117.7
Q ss_pred HHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhh-hhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Q psy8365 58 EHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLID-RVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIF 136 (381)
Q Consensus 58 ~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-r~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 136 (381)
|+=.|-||+|..|...++..+..|..++....|++.. | .++|+...+++...+++..+...++...+.+.+..+-++.
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~-~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~ 311 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRR-LGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLL 311 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 3455678999999999999999999999999999888 6 7888888889888888887777777788999999999999
Q ss_pred hccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 137 GIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 137 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
|++.|.......+...|..++++.|..+|.+.....++..++..+++.+.+..
T Consensus 312 G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 312 GLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLV 364 (403)
T ss_pred HHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987754
No 227
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.77 E-value=9e-08 Score=89.58 Aligned_cols=122 Identities=12% Similarity=0.153 Sum_probs=90.0
Q ss_pred CcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHh-hcchHHHHHHHHHHH
Q psy8365 252 PVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDK-TGRNLFWVFISLMVS 330 (381)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~g~r~~~~~~~~~~~ 330 (381)
++.++......++....++....+++.|+++++|++..+++..............+++|++.|| +|||+.+........
T Consensus 20 p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ 99 (500)
T PRK09584 20 PKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLA 99 (500)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 5678888888889989999999999999999999999988887777665555556789999999 599988555544444
Q ss_pred HHHHHHHhhcc---chhHHHHHHHHHHHHhhhcchhhhhhhcccCCc
Q psy8365 331 IVCHFMVGHTM---IDPHITMVMMGIAYSMVASGLWPLIALVIPEYQ 374 (381)
Q Consensus 331 ~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 374 (381)
++..+..... ....+...+.+++.+...+...++..|.+|++.
T Consensus 100 -ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~ 145 (500)
T PRK09584 100 -IGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDD 145 (500)
T ss_pred -HHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCc
Confidence 3333333321 123344556777777777888889999998653
No 228
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.74 E-value=8.1e-07 Score=76.25 Aligned_cols=140 Identities=11% Similarity=0.072 Sum_probs=108.9
Q ss_pred cCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHH
Q psy8365 51 DNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITI 130 (381)
Q Consensus 51 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 130 (381)
+..-.-+|.+..|-|+|+.+.|++.+...+.....++..-.+.+|.-++|+..+....++.+|...+.+. +.-..++
T Consensus 225 Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~---P~~~~~l 301 (395)
T COG2807 225 YIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLA---PGQLPIL 301 (395)
T ss_pred HHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHh---hhhHHHH
Confidence 3344456899999999999999999999999999999999999973567777777777787887766552 2221111
Q ss_pred HHHHHHhccchhhhhhhhhhhhhcccC-CcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchh
Q psy8365 131 LGRFIFGIGGESLAVAQNSYAVLWFKG-KELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQT 199 (381)
Q Consensus 131 ~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~ 199 (381)
- -++.|+|.|..++.....+.+..++ ++-+...++.+....+=..+||.+.|.+.|..+ +|+.
T Consensus 302 w-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g-----sw~~ 365 (395)
T COG2807 302 W-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG-----SWSA 365 (395)
T ss_pred H-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC-----ChHH
Confidence 1 4899999999999999999977753 455666677777777777789999999988776 7887
No 229
>KOG3574|consensus
Probab=98.73 E-value=1.2e-06 Score=75.30 Aligned_cols=269 Identities=13% Similarity=0.066 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhh-----hhcCchhhhHHHH
Q psy8365 33 VLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLID-----RVFGIRMGSTIYS 107 (381)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-----r~~G~r~~~~~~~ 107 (381)
...+.++.+.+..++.-....+ .+|.+.+.-|.|.++.+...-+ +..+. ..+++.++.| | +||||..++=+
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~a-y~P~s-LKllWaPiVDs~y~k~-~GrrksWvvp~ 105 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFA-YWPFS-LKLLWAPIVDSVYSKR-FGRRKSWVVPC 105 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhh-hhHHH-HHHHHHhhhHHHHHHh-hccccceeeeh
Confidence 3445566667888877777766 7799988888888887765333 33333 3778999999 9 99999766532
Q ss_pred HHHHHHHHHHHhhh----------ccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHh
Q psy8365 108 VLVVIGQLVFALGA----------YVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTV 177 (381)
Q Consensus 108 ~~~~~~~~~~~~~~----------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 177 (381)
- ..+|.++..++. -.++...+....++.-+..+....+...+.-....+++.|-+......+.+.|..+
T Consensus 106 q-~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL 184 (510)
T KOG3574|consen 106 Q-YLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFL 184 (510)
T ss_pred H-HHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHh
Confidence 2 223333332211 12333334445566667767777888888888888899888888777777777777
Q ss_pred hhhhhHHHHh-hhhccccccch------hhHHHHHHHHHHHHHHHHHHHhhcccchhhHHHhhhcccCccccc---cccc
Q psy8365 178 NMFVAEPLYK-YVEKFGLIGYQ------TLGIVLLLAGMTCVLSLLCSLLLGCMDKRAERILNRRNAGETEVA---RLSD 247 (381)
Q Consensus 178 g~~~~~~l~~-~~~~~~~~gWr------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 247 (381)
+..+--.+-. .+-+.+.++|. .+.-++.+.+...+++-....+ . +++.++...+ +.+.+... -+++
T Consensus 185 ~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~--~-kke~~~~~~~-e~~~~i~~~yk~l~~ 260 (510)
T KOG3574|consen 185 GNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVAL--L-KKENDESVDE-ELELGIHESYKLLRD 260 (510)
T ss_pred hcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHH--h-cCCCchhhhh-hhhcCHHHHHHHHHH
Confidence 6544322211 01011111121 1111222222222222221111 1 2222221111 11111112 2345
Q ss_pred ccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHH
Q psy8365 248 VKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLV 312 (381)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l 312 (381)
+.+ -|.+..+.......-.++.+-....+.-+.+ +|.+..+.+++.....-..++.....|+.
T Consensus 261 vLk-lk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ 323 (510)
T KOG3574|consen 261 VLK-LKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKW 323 (510)
T ss_pred HHc-CccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheee
Confidence 555 3555555555555555555555555554544 79998887776644333444444444433
No 230
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.68 E-value=5.9e-07 Score=80.67 Aligned_cols=127 Identities=12% Similarity=-0.105 Sum_probs=83.3
Q ss_pred chhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCch---hhhHH-HHHHHHHHHHHHHhhhccchhHH
Q psy8365 53 PSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIR---MGSTI-YSVLVVIGQLVFALGAYVDSLFI 128 (381)
Q Consensus 53 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 128 (381)
...-.|.+.++.|.+.. .+...+...+...++ .++++|| ..|| +.... ..+..++...... +..+...
T Consensus 211 ~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~-~~r~~~r~~~~~~~~~~~a~~~~~~~---~~~~~~~ 282 (368)
T TIGR00903 211 LAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDR-VARAGLRSIYIRAAALLIAAFFLALA---FELNRLA 282 (368)
T ss_pred HHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHH-hhhhhhHHHHHHHHHHHHHHHHHHHH---HccccHH
Confidence 33445666677777764 555555555544444 4778887 7654 33222 2322333222222 2344444
Q ss_pred HHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHh
Q psy8365 129 TILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYK 187 (381)
Q Consensus 129 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (381)
..+.-.+.|++....++...++.+|.+|++.|+++.|+.+....+|..++|.+.+.+..
T Consensus 283 ~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~ 341 (368)
T TIGR00903 283 LFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS 341 (368)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc
Confidence 45555666777677777788899999999999999999999999999999988887763
No 231
>KOG3762|consensus
Probab=98.65 E-value=7.7e-08 Score=86.35 Aligned_cols=128 Identities=12% Similarity=0.054 Sum_probs=111.2
Q ss_pred HHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhcc
Q psy8365 60 FTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIG 139 (381)
Q Consensus 60 ~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 139 (381)
-.||++-.+...|.....-..+-++.-++.+++.+| +|+-+++.+++.+..+=.+.... .+|.|+.+...+++|+.
T Consensus 397 Hled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~k-iGHv~v~~lgLa~~~~Rf~~~S~---L~n~W~vLPieilqgit 472 (618)
T KOG3762|consen 397 HLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEK-IGHVNVMYLGLACNVGRFLYYSY---LQNPWMVLPIEILQGIT 472 (618)
T ss_pred HHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHH-hcccceeeehhhHHHHHHHHHHH---hcCchheeeHHHHHHHH
Confidence 346777777778877778888888999999999999 99999999998888776554444 79999999999999999
Q ss_pred chhhhhhhhhhhhhcccCCcchHHHHHHHH-HHhHhhHhhhhhhHHHHhhhhc
Q psy8365 140 GESLAVAQNSYAVLWFKGKELNMVFGFQLS-LSRVGSTVNMFVAEPLYKYVEK 191 (381)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~~~ 191 (381)
.+..+.+..+|+++..||+-|..+.++.+. ..++|--+|.++|+.+.+.++.
T Consensus 473 ~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~ 525 (618)
T KOG3762|consen 473 HALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGA 525 (618)
T ss_pred HHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehh
Confidence 999999999999999999999999998865 5568999999999999998753
No 232
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.63 E-value=1.5e-07 Score=63.37 Aligned_cols=80 Identities=16% Similarity=-0.021 Sum_probs=70.0
Q ss_pred hhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccch
Q psy8365 46 SYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDS 125 (381)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (381)
.+..+..+.+++|.+++|.++|.++.|++.+..++||.++.+...++.++ ..+++.+..+.+...+..+.+++ .++
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~-~~~~~~~~~~l~~~~~~~~~ma~---~~~ 79 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRH-SRPRRLLRAGLLLTVLSTAAMAL---THS 79 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHH---Hhc
Confidence 45677888999999999999999999999999999999999999999999 88899999998888888776665 566
Q ss_pred hHHH
Q psy8365 126 LFIT 129 (381)
Q Consensus 126 ~~~l 129 (381)
++.+
T Consensus 80 ~~~w 83 (85)
T PF06779_consen 80 FWLW 83 (85)
T ss_pred hHHH
Confidence 5543
No 233
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.62 E-value=2.1e-06 Score=78.41 Aligned_cols=118 Identities=11% Similarity=-0.051 Sum_probs=88.0
Q ss_pred cCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhh
Q psy8365 65 HLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLA 144 (381)
Q Consensus 65 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 144 (381)
+.+....+...+.+.....++.++++++.|| +++||.+.+.....++..++... .++... ...-.+.|++.+..+
T Consensus 265 ~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r-~~~~~~l~i~~~~~~~~~ll~~~---~~~~~~-~~~l~~~glf~s~~f 339 (410)
T TIGR00885 265 GMTAGFAANYNIGAMVIFFISRFIGTWLISY-LAAHKVLMAYAIIGMALCLGSIF---AGGHVG-LYCLTLCSAFMSLMF 339 (410)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHH---cCChHH-HHHHHHHHHHHHHHH
Confidence 4455555556666668889999999999999 99999988887777766665544 455433 566677788889999
Q ss_pred hhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 145 VAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 145 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
|...+...+..+++.+....++. ++ .+|.++.|++.|.+.+..
T Consensus 340 p~i~sl~~~~~g~~~~~~s~~l~-~~-~~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 340 PTIYGIALKGLGQDTKYGAAGLV-MA-IIGGGIVPPLQGFIIDMK 382 (410)
T ss_pred HHHHHHHHhhhhhhhhhhHHHHH-HH-HhccchHHHHHHHHHHHh
Confidence 99999999999855443333333 33 399999999999999854
No 234
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.60 E-value=1.1e-06 Score=67.55 Aligned_cols=107 Identities=12% Similarity=0.125 Sum_probs=90.1
Q ss_pred HHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhh
Q psy8365 74 LYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVL 153 (381)
Q Consensus 74 ~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 153 (381)
-.++.+....+.+++...+.++ +|.|+.++++.+...+-..... -++.+.++.+-.+.|++.+..+++...++.+
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~-lg~K~sm~lg~~~y~~y~~~~~----~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~ 116 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNK-LGPKWSMILGSLGYAIYIASFF----YPNSYTLYPASALLGFGAALLWTAQGTYLTS 116 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHhhhhHHhhHhhhHHHHH
Confidence 3455666677888888999999 9999999999998876544332 5788999999999999999999999999999
Q ss_pred cccCCcchHHHHHHHHHHhHhhHhhhhhhHHH
Q psy8365 154 WFKGKELNMVFGFQLSLSRVGSTVNMFVAEPL 185 (381)
Q Consensus 154 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 185 (381)
..++++|++..++.......+.++|.++...+
T Consensus 117 ~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 117 YSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred cCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888877665544
No 235
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.56 E-value=4e-06 Score=76.78 Aligned_cols=130 Identities=8% Similarity=-0.008 Sum_probs=86.3
Q ss_pred HHH-HHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhh--ccchhHHHHHHH
Q psy8365 57 EEH-FTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGA--YVDSLFITILGR 133 (381)
Q Consensus 57 ~~~-~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r 133 (381)
.|. +++.+|.++.+.++.......+..++..+.+.+.+| ..+++.......+..++.++..... ..+++...++..
T Consensus 241 ~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~ 319 (413)
T PRK15403 241 SPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKD-PTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGT 319 (413)
T ss_pred ChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHH
Confidence 354 455679999999999888888888888888887755 4554443333333333433332211 133444456788
Q ss_pred HHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhh
Q psy8365 134 FIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKY 188 (381)
Q Consensus 134 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (381)
++.++|.+...+......-+ -++..+|++.++.+.....+..+++..++.+.++
T Consensus 320 ~l~~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 320 SLYAFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred HHHHHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88899888888777643321 1233579999999888888888888888877665
No 236
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.54 E-value=2.5e-06 Score=74.40 Aligned_cols=135 Identities=15% Similarity=0.134 Sum_probs=101.6
Q ss_pred hcCchhhHHHHHhh-hcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHH
Q psy8365 50 YDNPSSLEEHFTTD-MHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFI 128 (381)
Q Consensus 50 ~~~~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (381)
........+.+.+| .|.++.+.+...+.+..+..+|.+++.++..| +...|.+.+..++..+-.+.. .+.++...
T Consensus 252 Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~-~~~~k~Laf~a~~~ill~~~~---~l~~g~v~ 327 (422)
T COG0738 252 EVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSR-IKPEKYLAFYALIAILLLLAV---ALIGGVVA 327 (422)
T ss_pred HHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHH---HHhcChHH
Confidence 33444445555555 88999999999999999999999999999999 999999888765544433333 33667544
Q ss_pred HHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhc
Q psy8365 129 TILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEK 191 (381)
Q Consensus 129 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 191 (381)
+ .+-++.|+..+..+|...+...+..| ++ ....|..-....+|.++-|.+-|++.+..+.
T Consensus 328 ~-~~l~~ig~F~simfPTIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i~d~~g~ 387 (422)
T COG0738 328 L-YALFLIGLFNSIMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVIADMFGI 387 (422)
T ss_pred H-HHHHHHHHHhHHHHHHHHHHHHhccC-cc-ccccceeeeeheecchHHHHHHHHHHHhhhh
Confidence 4 45577788889999999999999998 33 3344444455568889999999999998764
No 237
>KOG2532|consensus
Probab=98.54 E-value=3.5e-07 Score=83.84 Aligned_cols=170 Identities=12% Similarity=0.093 Sum_probs=103.1
Q ss_pred HHHHHHHHHHhhhhhhcCchhhHH-HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCch------hhhHHHH
Q psy8365 35 ALLLMCLLGFGSYFCYDNPSSLEE-HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIR------MGSTIYS 107 (381)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r------~~~~~~~ 107 (381)
.+..+++..+........+....| ++.+-+|.+..+.|++.++..+...+..+.+|.++|| .-+| +.-+...
T Consensus 259 ~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~-l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 259 PVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDR-LTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHH-HhhccCchHhHHHHHHh
Confidence 455666666666666655555556 5566799999999999999999999999999999999 6552 1111112
Q ss_pred HHHHHHHHHHHhhhccch--h-HHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHH
Q psy8365 108 VLVVIGQLVFALGAYVDS--L-FITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEP 184 (381)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~--~-~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 184 (381)
+......+.+...++.++ . ..+...-+-.++. |........-..|.. |++-+..+|+.+....+...++|.+.+.
T Consensus 338 i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~-g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~ 415 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLS-GFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGI 415 (466)
T ss_pred HHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHc-ccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheee
Confidence 222222222222233332 1 1222111112222 222222222233334 4888999999999999999999999998
Q ss_pred HHhhhhccccccchhhHHHHHHHHHHHH
Q psy8365 185 LYKYVEKFGLIGYQTLGIVLLLAGMTCV 212 (381)
Q Consensus 185 l~~~~~~~~~~gWr~~~~~~~~~~~~~~ 212 (381)
+.+.- .. ..||+ +|++.+++..+
T Consensus 416 ~~~~~-t~--~eW~~--VF~i~a~i~~~ 438 (466)
T KOG2532|consen 416 IVTDN-TR--EEWRI--VFLIAAGILIV 438 (466)
T ss_pred EeCCC-CH--HHHHH--HHHHHHHHHHH
Confidence 88521 11 27998 66665554333
No 238
>KOG3764|consensus
Probab=98.54 E-value=3.9e-07 Score=78.99 Aligned_cols=137 Identities=10% Similarity=-0.035 Sum_probs=99.9
Q ss_pred CchhhHHH-HHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHH
Q psy8365 52 NPSSLEEH-FTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITI 130 (381)
Q Consensus 52 ~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 130 (381)
..-|.++. +.|.+..+..++|...--..+.+.++..+.|.++|| ++..+.+....-+..+| +.+..-.+++++..++
T Consensus 288 fLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k-~~~~~wl~~~~gl~~~G-~~~~~iP~~~~~~~L~ 365 (464)
T KOG3764|consen 288 FLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADK-YPHLRWLLSLGGLATVG-VSSGPIPFATSIAQLW 365 (464)
T ss_pred HhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHh-cCchhHHHHHHHHHHHH-HHhchhHhhhhHHHHh
Confidence 33444444 667777556689998888999999999999999999 99544333322222233 2222335589999999
Q ss_pred HHHHHHhccchhhhhhhhhhhhhcc---cCC---cchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 131 LGRFIFGIGGESLAVAQNSYAVLWF---KGK---ELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 131 ~~r~l~G~~~~~~~~~~~~~i~~~~---~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
+-++..|++.+...........+.. ..+ ..|...++...++.+|..+||.+++.+.+..+
T Consensus 366 vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iG 431 (464)
T KOG3764|consen 366 VPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIG 431 (464)
T ss_pred hhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehh
Confidence 9999988887777766555444444 333 56789999999999999999999999998874
No 239
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.47 E-value=1.4e-06 Score=78.47 Aligned_cols=109 Identities=12% Similarity=0.101 Sum_probs=85.4
Q ss_pred cchhhHHHHHHHhcCCChhh-hhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh-ccchhHHHH
Q psy8365 271 PFVSLAQELFVKRFNLDSDA-ANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH-TMIDPHITM 348 (381)
Q Consensus 271 ~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 348 (381)
....+..+++.+++|++..+ .|.+......+..+..+.+|++.||+|.|+.+....+.-.+...+.... +.....+.-
T Consensus 43 ~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R 122 (511)
T TIGR00806 43 PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLME 122 (511)
T ss_pred chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445556788889999999 9999999999999999999999999999998665555444444333322 334455666
Q ss_pred HHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 349 VMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 349 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
+++|++.+... ....++.+.+|+++|+++.|
T Consensus 123 ~llGvaEA~~~-A~~syI~~WfP~kER~rats 153 (511)
T TIGR00806 123 VFYSVTMAARI-AYSSYIFSLVPPSRYQRAAA 153 (511)
T ss_pred HHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHH
Confidence 78899988877 88999999999999999876
No 240
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.40 E-value=3.9e-06 Score=75.37 Aligned_cols=122 Identities=11% Similarity=0.189 Sum_probs=98.7
Q ss_pred CcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcC----CChhhhhhhHHHHHHHHhhhhhhHHHHHHhh-cchHHHHHHH
Q psy8365 252 PVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFN----LDSDAANRLNSIVYTISAFLSPLMGLVVDKT-GRNLFWVFIS 326 (381)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~ 326 (381)
+|.++.+...-+.--+++|++...+..|+....+ +|++++.-+.+.+....-+..+++|+++||+ |+|+.++ .+
T Consensus 20 Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~-lG 98 (498)
T COG3104 20 PRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIV-LG 98 (498)
T ss_pred CchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH-HH
Confidence 7889999999999999999999999999998888 9999888888887777777888999999997 7787744 44
Q ss_pred HHHHHHHHHHHhhc----cchhHHHHHHHHHHHHhhhcchhhhhhhcccCCc
Q psy8365 327 LMVSIVCHFMVGHT----MIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQ 374 (381)
Q Consensus 327 ~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 374 (381)
.++..++.+.+..+ .....+.+.+..+|.|..=+...++..|.+|+++
T Consensus 99 ail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~D 150 (498)
T COG3104 99 AILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDD 150 (498)
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCC
Confidence 44445666665553 2356677888889999888888999999998754
No 241
>KOG3810|consensus
Probab=98.39 E-value=1.4e-05 Score=68.08 Aligned_cols=314 Identities=13% Similarity=0.091 Sum_probs=181.0
Q ss_pred hhhHHHHH-hhhcCChHHHH-HHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHH
Q psy8365 54 SSLEEHFT-TDMHLTNAQYM-NLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITIL 131 (381)
Q Consensus 54 ~~~~~~~~-~~~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 131 (381)
+...|++. .+.|+++.|+. -+.-...-.+.+.-.+.=.+.|. .-.|++++.-.+.......++.+ .++.+.+=+
T Consensus 25 P~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~-lrYKPvivlq~ls~v~~w~~lv~---g~sV~~mQv 100 (433)
T KOG3810|consen 25 PYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDY-LRYKPVVVLQALSGVPVWIMLVF---GPSVKAMQV 100 (433)
T ss_pred CccchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhh-hhcceeeeeeccchhHHHHHHHh---cCCchheee
Confidence 34445554 45577777653 22233334445555566678998 88888877765555444444444 688998888
Q ss_pred HHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHH
Q psy8365 132 GRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTC 211 (381)
Q Consensus 132 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~~~ 211 (381)
..++.|.. .....+-.+++-+..+|+++.++.+..-...-.|..+|..++..+.+.-... .+. .-.+.....
T Consensus 101 lE~FyG~~-tAaEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~s----y~~---LN~ISL~~~ 172 (433)
T KOG3810|consen 101 LEFFYGPA-TAAEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLS----YTT---LNYISLAEV 172 (433)
T ss_pred ehhhcChH-HHHHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccc----hhh---hchhhHHHH
Confidence 89999987 5667778888888899999999999999999999999888887776543211 111 222222233
Q ss_pred HHHHHHHHhhcccchhhHHHhhhcc------cCcccccc---------------cccccccCcchhhHHHHHHHhhhhhh
Q psy8365 212 VLSLLCSLLLGCMDKRAERILNRRN------AGETEVAR---------------LSDVKHFPVSFWMVVVIIVSYYTSIF 270 (381)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (381)
.++.....+++..++..-....+++ ++.+++.+ +++..+ ||++..-.+-..+...+++
T Consensus 173 ~ia~~~A~fLP~v~rSl~f~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~-np~ll~WSlWwAl~scg~~ 251 (433)
T KOG3810|consen 173 TIAVLLALFLPRVKRSLYFHRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYS-NPRLLKWSLWWALASCGYY 251 (433)
T ss_pred HHHHHHHhhCCCCchhhhhhcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhc-CchhhhhHHHHHHhhchhH
Confidence 3444444333222211000000000 00001111 111112 5666666666667777777
Q ss_pred cchhhHHHHHHHhcC-CChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcch-HHHHHHHHHHHHHHHHHHhh--ccchhHH
Q psy8365 271 PFVSLAQELFVKRFN-LDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRN-LFWVFISLMVSIVCHFMVGH--TMIDPHI 346 (381)
Q Consensus 271 ~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r-~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 346 (381)
-..+|......+... -.....|..-+...+.++++.+..|.+--++.|. ..++..+...-...++++.. ..+..+.
T Consensus 252 QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya 331 (433)
T KOG3810|consen 252 QVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYA 331 (433)
T ss_pred HHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhh
Confidence 777776665555421 1112234445556666777777778776555544 34344443333334444443 3455566
Q ss_pred HHHHHHHHHHhhhcchhhhhhhcccCCccccccc
Q psy8365 347 TMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 347 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 380 (381)
..+++...+....++....+++....|.-|-..|
T Consensus 332 ~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFG 365 (433)
T KOG3810|consen 332 GYVLFRVIYQLTITIATFQIARNLSSELFGLVFG 365 (433)
T ss_pred hHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeee
Confidence 6777777777777776666666666666666555
No 242
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.38 E-value=1.7e-06 Score=57.85 Aligned_cols=67 Identities=18% Similarity=0.150 Sum_probs=55.6
Q ss_pred HHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHH
Q psy8365 42 LGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVL 109 (381)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~ 109 (381)
.++..+.......|..|...++.|+|+.|+|.+.++..+...++++++|.++|| +++++.......+
T Consensus 8 ~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk-~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 8 FYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADK-FGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCccHHHHHHHHH
Confidence 344444555566677777888899999999999999999999999999999999 9999987776544
No 243
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.38 E-value=1.5e-06 Score=79.78 Aligned_cols=121 Identities=12% Similarity=0.087 Sum_probs=86.6
Q ss_pred chhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHH----hhcchHHHHHHHHHH
Q psy8365 254 SFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVD----KTGRNLFWVFISLMV 329 (381)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~d----r~g~r~~~~~~~~~~ 329 (381)
++..+....+...+.+.....+.++|++ ..|.++...+.......+.+.+..++.|+++| |+|||+..+..+...
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~-~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~ 83 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYVQ-ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHH
Confidence 3444555555556666666777888774 58999999999999999999999999999999 599999987776666
Q ss_pred HHHHHHHHhhccc-------------------hhHHHHHHHHHHHHhhhcchhhhhhhcccCCcc
Q psy8365 330 SIVCHFMVGHTMI-------------------DPHITMVMMGIAYSMVASGLWPLIALVIPEYQL 375 (381)
Q Consensus 330 ~~~~~~~~~~~~~-------------------~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~ 375 (381)
.+.++.++.+... ...+.+.+..++.....+...+++.|..|+++|
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~ 148 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDAR 148 (477)
T ss_pred HHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhH
Confidence 6666666554211 011122233345555667778999999998765
No 244
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.37 E-value=2.3e-05 Score=69.65 Aligned_cols=107 Identities=17% Similarity=0.145 Sum_probs=76.4
Q ss_pred HHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhh
Q psy8365 72 MNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYA 151 (381)
Q Consensus 72 g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 151 (381)
+.+.-+-.+...+..+.+-+..+| +..+.-.....++.++|.++.++ +++.+.=+++-.+.+++.|........+.
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~-v~y~~Ri~~~~~l~~~g~l~va~---~~~v~~~l~Gv~las~ssg~GE~tfL~lt 137 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHR-VPYWIRILICVALSAAGMLLVAF---SPSVWVRLLGVVLASLSSGLGEVTFLSLT 137 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhh-ccchHHHHHHHHHHHHHHhheee---ccchhHHHHHHHHHhhhhhhhHHHHHHHH
Confidence 345555556777777888889999 87655555566677777765554 78999999999999999888888777764
Q ss_pred hhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHh
Q psy8365 152 VLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYK 187 (381)
Q Consensus 152 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (381)
. .+++ ...+-++++.+.++++|+..-..+.+
T Consensus 138 ~-~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~ 168 (402)
T PF02487_consen 138 H-FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT 168 (402)
T ss_pred H-hcCc----cccccccCCcChhhHHHHHHHHHHHH
Confidence 4 5553 34677778888888887765444433
No 245
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.37 E-value=0.00012 Score=67.56 Aligned_cols=260 Identities=11% Similarity=0.065 Sum_probs=137.6
Q ss_pred ChHHHHHHHHHhhh-hhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhc------cc---------------
Q psy8365 67 TNAQYMNLYSWYSW-PNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAY------VD--------------- 124 (381)
Q Consensus 67 s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~------~~--------------- 124 (381)
+++.+..+-....+ ...+......+++|| +++++++-+....+...-.++++--+ .+
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~-~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~ 134 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNR-LSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGF 134 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchH
Confidence 55666666554444 334556778999999 99999877655554433333322100 00
Q ss_pred -------hhHHHHHHHHHHhccchhhhh-hhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHh-hhhcc--c
Q psy8365 125 -------SLFITILGRFIFGIGGESLAV-AQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYK-YVEKF--G 193 (381)
Q Consensus 125 -------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~~~--~ 193 (381)
+.|.+.+..++.-+-...... .-..+..|.++.+|-.|..++...+.++|.+++..+...+.+ ..... .
T Consensus 135 ~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~ 214 (491)
T PF03219_consen 135 KGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAG 214 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence 112222222333222122222 346788899999999999999999999999998877777766 11111 1
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHhhcccchh-----hHHHhhhcccCcccc----cccccccccCcchhhHHHHHHH
Q psy8365 194 LIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKR-----AERILNRRNAGETEV----ARLSDVKHFPVSFWMVVVIIVS 264 (381)
Q Consensus 194 ~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 264 (381)
...|.. .......+..+.+++......+.+++ ......+++++++++ ++.+.+.+ +|-+..+.+...+
T Consensus 215 ~~~~~~--~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~~~~~~~kk~k~k~s~~es~k~l~k-S~yL~~Ia~lvi~ 291 (491)
T PF03219_consen 215 VDAWEL--SLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFYPSAKKKKKKKPKMSLKESFKLLLK-SKYLLCIALLVIA 291 (491)
T ss_pred cccHhH--HHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchhhhcccccCCCccHHHHHHHHHh-CHHHHHHHHHHHH
Confidence 124654 22111111222222222222222211 110111112222222 33444555 6777777776666
Q ss_pred hhhhhhcchhhHHHHHHHhcCCChhh---hhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHH
Q psy8365 265 YYTSIFPFVSLAQELFVKRFNLDSDA---ANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVS 330 (381)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 330 (381)
+....+.+....-..+++.+.-+.+. .|......++..++...+++.+.+|+|-+....+.-..+.
T Consensus 292 Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~l 360 (491)
T PF03219_consen 292 YGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVIL 360 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHH
Confidence 66666655544444455544333222 2344455566666666788899999887666555433333
No 246
>PTZ00207 hypothetical protein; Provisional
Probab=98.31 E-value=4.3e-06 Score=78.63 Aligned_cols=109 Identities=12% Similarity=0.256 Sum_probs=71.7
Q ss_pred hhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhc--------
Q psy8365 269 IFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHT-------- 340 (381)
Q Consensus 269 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-------- 340 (381)
.+.+..+.+. +++++|+|..+.+.+....... ....+..|++.||+|+|+.+.+...... ++.++....
T Consensus 43 ~y~fsv~s~~-L~~~lgls~~~l~~i~svg~~~-g~~~lp~G~L~Dr~G~R~vllig~ll~~-iG~ll~ala~~~~i~~s 119 (591)
T PTZ00207 43 MYAFNLISGA-MQARYNLTQRDLSTITTVGIAV-GYFLLPYSFIYDYLGPRPIFVLSMTVFC-LGTLLFALTFQEVIEGS 119 (591)
T ss_pred HHHHHHHHHH-HHHHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcHHHHHHHHHHHH-HHHHHHHHHhcccccCc
Confidence 3444555554 6788999999998887664333 3456678999999999998655544444 344333332
Q ss_pred cchhHHHHHHHHHHHHhhhcchhhhhhhcccCCcccccccC
Q psy8365 341 MIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 341 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
.+...+...+.|++.+...+.....+.+.+| ++||++.|+
T Consensus 120 ~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi 159 (591)
T PTZ00207 120 VVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAI 159 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHH
Confidence 1223344556677776666666777888887 568988763
No 247
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.30 E-value=4.4e-06 Score=55.88 Aligned_cols=71 Identities=18% Similarity=0.265 Sum_probs=60.2
Q ss_pred hHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHH
Q psy8365 257 MVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLM 328 (381)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~ 328 (381)
.+-...++.+.+......+.|.|+++ .|+|+.+.|.+.++..+...++.++.|.++||.++++.....+..
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 34455667777777888899998876 799999999999999999999999999999999998886655544
No 248
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.25 E-value=1.4e-08 Score=94.17 Aligned_cols=134 Identities=19% Similarity=0.163 Sum_probs=87.2
Q ss_pred chhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHH--hhhccc-----h
Q psy8365 53 PSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFA--LGAYVD-----S 125 (381)
Q Consensus 53 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~--~~~~~~-----~ 125 (381)
.....+.+.++.+.++. -.......+...++.+....+.|| +|||+.++.+....++..+.+. .....+ +
T Consensus 272 ~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (451)
T PF00083_consen 272 IFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDR-FGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWS 348 (451)
T ss_pred ccccccccccccccccc--cccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccc
Confidence 33444667777777666 222223334555667777799999 9999999999888777766553 111112 2
Q ss_pred hHHHHHHHHHHhccch-hhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 126 LFITILGRFIFGIGGE-SLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 126 ~~~l~~~r~l~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
+..+. .-.+.....+ +..+....+..|.+|.+.|++..++......++..+++.+...+.+..+
T Consensus 349 ~~~i~-~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~ 413 (451)
T PF00083_consen 349 ILSIV-FLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG 413 (451)
T ss_pred cccce-eeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 22222 2222222222 3445666888999999999999999999999999988887777766553
No 249
>KOG2816|consensus
Probab=98.21 E-value=1.6e-05 Score=72.79 Aligned_cols=126 Identities=13% Similarity=0.188 Sum_probs=110.5
Q ss_pred HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhh-hhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHh
Q psy8365 59 HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGG-FLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFG 137 (381)
Q Consensus 59 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g-~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 137 (381)
++...+++++.+.+...+.......+++.+.. .+... +|-|+.+..|+....+.....++ +++.|+++....+.+
T Consensus 267 yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lGl~~~~~~~~~~af---~~~~w~~~~~~v~~~ 342 (463)
T KOG2816|consen 267 YLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLGLLSEFLQLLLFAF---ATETWMMFAAGVVVA 342 (463)
T ss_pred EEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHHHHHHHHHHHHHHH---hccchhhhHHHHHHH
Confidence 56678999999999988888888888888877 66666 99999999999888888887766 899999999999988
Q ss_pred ccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 138 IGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 138 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
+. ....+...+.++.+.+++++|+++++.+....+...++|.+-+.+....
T Consensus 343 ~~-~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 343 LA-GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred hh-cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 87 8889999999999999999999999999999999999998887776544
No 250
>KOG1330|consensus
Probab=98.20 E-value=2.9e-06 Score=75.20 Aligned_cols=127 Identities=16% Similarity=0.304 Sum_probs=93.9
Q ss_pred cchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHH
Q psy8365 253 VSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIV 332 (381)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 332 (381)
+....+.+.....+.--+.+....+. .++.+|.++...|++.....+...+.+++.|++.||+.|+.+ +..+..+-..
T Consensus 33 ~~l~il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v-~~vG~~iW~~ 110 (493)
T KOG1330|consen 33 LTLVILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRV-IAVGIFIWTL 110 (493)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceE-EeeHHHHHHH
Confidence 33444555555555555555554444 567789999999999999999999999999999999998887 4444444334
Q ss_pred HHHHHhh--ccchhHHHHHHHHHHHHhhhcchhhhhhhcccCCcccccccC
Q psy8365 333 CHFMVGH--TMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 333 ~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
+.+...+ ..|...+.-.+.|+|.+...|...++++|.+|.++|+++.|+
T Consensus 111 Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~i 161 (493)
T KOG1330|consen 111 AVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGI 161 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHH
Confidence 4433333 334555666778999999999999999999999999998764
No 251
>KOG1479|consensus
Probab=98.13 E-value=0.0002 Score=63.27 Aligned_cols=330 Identities=12% Similarity=0.065 Sum_probs=149.3
Q ss_pred HHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHH
Q psy8365 35 ALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQ 114 (381)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~ 114 (381)
.....++..+.....+..+....+++.+++-.+.. .......+.+...+...+...+--| ...|....++..+.....
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~-~~~~~~~~~~~~l~~~~i 96 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAF-LNTRLRTRVGYLLSLIAI 96 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 44455555666667777777777888887754443 3333444444444444444444444 333322222222222211
Q ss_pred HH---H--Hh--h--hccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHH
Q psy8365 115 LV---F--AL--G--AYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPL 185 (381)
Q Consensus 115 ~~---~--~~--~--~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 185 (381)
++ + +. . .....+...++.-.+.+.+.+..+.......++ +|+|.-.. ...+.++++++..++. .+
T Consensus 97 l~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqa----vm~G~a~aG~l~Sl~~-i~ 170 (406)
T KOG1479|consen 97 LFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQA----VMSGQALAGTLTSLLR-IL 170 (406)
T ss_pred HHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHH----HHhcchhHhHHHHHHH-HH
Confidence 11 1 11 0 112346666777778888888888777777665 45453222 2233344444333221 11
Q ss_pred HhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhhH----HHhhhccc-Cccccccccccccc---Ccchh-
Q psy8365 186 YKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRAE----RILNRRNA-GETEVARLSDVKHF---PVSFW- 256 (381)
Q Consensus 186 ~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~---~~~~~- 256 (381)
........ -.....++.++.+..++++++...+. +.|--+ +..+++.+ .+++.++..+..+. .+...
T Consensus 171 tka~~~~~---~~sA~~yF~~s~~~~llC~i~y~~l~-~lpf~~yy~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 246 (406)
T KOG1479|consen 171 TKAAFSDS---RTSALIYFITSTVILLLCFVLYLVLP-KLPFVRYYREKAGSIGSKLAAEGIESDSSLSNEDDSLWDIFK 246 (406)
T ss_pred HHHhcCCC---CceeehhHHHHHHHHHHHHHHHHHhh-cchHHHHHhhhcccccccccccccccccccccccchHHHHHH
Confidence 12211111 02222566776666666655554321 111100 00000000 00001111111110 01111
Q ss_pred hHHHHHHHhhhhhhcchhhHHHHHHHhcCC---ChhhhhhhHHH-HHHHHhhhhhhHHHHHHhhcchHHHHH-HHHHHHH
Q psy8365 257 MVVVIIVSYYTSIFPFVSLAQELFVKRFNL---DSDAANRLNSI-VYTISAFLSPLMGLVVDKTGRNLFWVF-ISLMVSI 331 (381)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~-~~~~~~i~~~~~g~l~dr~g~r~~~~~-~~~~~~~ 331 (381)
...--.+.....+.......|-+..+..+- +....-..... ..+...+|.+...+.-++ ++|..... ..=.+.+
T Consensus 247 k~~~~~~~i~lvy~VTLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~i~v~lR~lfi 325 (406)
T KOG1479|consen 247 KIKDLAFNIFLVYFVTLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP-DPRKLTIPVLLRLLFI 325 (406)
T ss_pred HHHHHhhchheeeeeeeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC-CCceehHHHHHHHHHH
Confidence 111112222333333444556655554322 22333344444 677777886665555444 23333222 2222222
Q ss_pred HHHHHHh-------h-ccchhHHHHHHHHHHHHhhhcchhhhhhhcccCCcccc
Q psy8365 332 VCHFMVG-------H-TMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGT 377 (381)
Q Consensus 332 ~~~~~~~-------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~ 377 (381)
..+.+.. + +.+.......++|+..|-..+....+..+.+|++++-.
T Consensus 326 PlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~ 379 (406)
T KOG1479|consen 326 PLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEA 379 (406)
T ss_pred HHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHH
Confidence 2222111 1 33445666777888888888888888899888766543
No 252
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.12 E-value=9.9e-05 Score=66.62 Aligned_cols=109 Identities=13% Similarity=0.196 Sum_probs=82.7
Q ss_pred hhhHHHHHHHHHHHHHHHhhhccchh------HHHHHHHHHHhccchhhhhhhhhhhhhcccCC---cchHHHHHHHHHH
Q psy8365 101 MGSTIYSVLVVIGQLVFALGAYVDSL------FITILGRFIFGIGGESLAVAQNSYAVLWFKGK---ELNMVFGFQLSLS 171 (381)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 171 (381)
|++.++.++..+|.+++.+++...+. ..++++..+.++|.|+.-|...++.+|.++++ +|...+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 57788899999999886665444444 68999999999999999999999999999765 4677888999999
Q ss_pred hHhhHhhhhhhHHHHhhhhccccccchhhHHHHHHHHHHHHHHHHHH
Q psy8365 172 RVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCS 218 (381)
Q Consensus 172 ~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~ 218 (381)
++|..++..+.+.+-++. ||.+ .+.+..+..+++++..
T Consensus 82 n~G~~~~~~~~~~i~~~~------~~~~---~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNY------GWFL---GFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-------HHH---HHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhcccc------chhh---hhhHHHHHHHHHHHHH
Confidence 999999999888887655 6776 3444443444554443
No 253
>KOG0252|consensus
Probab=98.04 E-value=3.7e-05 Score=68.31 Aligned_cols=150 Identities=11% Similarity=-0.046 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHH--------HHH-HhhhhhhHHhhhhhhhhhhhcCchhhhH
Q psy8365 34 LALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMN--------LYS-WYSWPNVICCFIGGFLIDRVFGIRMGST 104 (381)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~--------~~s-~~~~~~~~~~~~~g~l~dr~~G~r~~~~ 104 (381)
..+...+...|+.....+..+..+..+-+.+++.+.+... ... +...++..+-.+...++|+ .|||+..+
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~-iGRk~iq~ 382 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDI-IGRKYIQL 382 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeeh-hhhHHHHH
Confidence 4455556666666666666677777777777654433222 112 2234445577788899999 99999999
Q ss_pred HHHHHHHHHHHHHHhhhccch----hHHHHHHHHHHhcc-chhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhh
Q psy8365 105 IYSVLVVIGQLVFALGAYVDS----LFITILGRFIFGIG-GESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNM 179 (381)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~----~~~l~~~r~l~G~~-~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 179 (381)
.+.+++++..+..+. ..| -..+.+...+..+. .-+.......+-+|.+|.+-|+...|+.....-.|.++|.
T Consensus 383 ~GF~~~~i~~~~~~~---~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~ 459 (538)
T KOG0252|consen 383 MGFFIMTIFFFVIAG---PYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGA 459 (538)
T ss_pred hhHHHHHHHHHHHcC---CcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHH
Confidence 998888777664443 222 11222222222222 1122334446667999999999999999999999999988
Q ss_pred hhhHHHHh
Q psy8365 180 FVAEPLYK 187 (381)
Q Consensus 180 ~~~~~l~~ 187 (381)
..-..+.+
T Consensus 460 ~~F~~~t~ 467 (538)
T KOG0252|consen 460 FGFLYLTD 467 (538)
T ss_pred HHhhHhhh
Confidence 77777666
No 254
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.02 E-value=5.9e-06 Score=62.82 Aligned_cols=85 Identities=21% Similarity=0.207 Sum_probs=59.7
Q ss_pred HHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh--ccchhHHHHHHHHHHHHhhhcchhhhhhhcccC
Q psy8365 295 NSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH--TMIDPHITMVMMGIAYSMVASGLWPLIALVIPE 372 (381)
Q Consensus 295 ~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 372 (381)
.....++..++.+..|++.||++||+.+........ .+...... +.+.......+.+++.+...+....+..|..|+
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 82 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFV-LSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPP 82 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHH-HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCh
Confidence 344566778889999999999999988655444433 33333322 222344455677777777788889999999999
Q ss_pred Cccccccc
Q psy8365 373 YQLGTAYG 380 (381)
Q Consensus 373 ~~~g~~~g 380 (381)
++|+++.|
T Consensus 83 ~~~~~~~~ 90 (141)
T TIGR00880 83 EERGVALG 90 (141)
T ss_pred hhhhHHHH
Confidence 99988765
No 255
>KOG3762|consensus
Probab=97.99 E-value=2.7e-05 Score=70.45 Aligned_cols=128 Identities=9% Similarity=0.041 Sum_probs=87.8
Q ss_pred CcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHH
Q psy8365 252 PVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSI 331 (381)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~ 331 (381)
+++...+.+...+...+...+.+++--++++ .+..+..-|........+-++.-+..+++++|+|+-+. +..++.+-.
T Consensus 370 s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v-~~lgLa~~~ 447 (618)
T KOG3762|consen 370 SPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNV-MYLGLACNV 447 (618)
T ss_pred CCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccce-eeehhhHHH
Confidence 4454444444444444444444554344544 56666777777777777778888889999999998887 444444444
Q ss_pred HHHHHHhh--ccchhHHHHHHHHHHHHhhhcchhhhhhhcccCCcccccccC
Q psy8365 332 VCHFMVGH--TMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 332 ~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
.=++.+.+ ++|..+..-++-|+..+.+....-+|++...|++.++++.|+
T Consensus 448 ~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l 499 (618)
T KOG3762|consen 448 GRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGL 499 (618)
T ss_pred HHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHH
Confidence 44444333 566666677888999999998889999999999999888753
No 256
>KOG2533|consensus
Probab=97.98 E-value=9.3e-05 Score=68.42 Aligned_cols=138 Identities=14% Similarity=0.060 Sum_probs=84.1
Q ss_pred HHHHHHHHHhhhhhhcCchhhHHHHHhh-hcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcC----chhhhHHHHHHH
Q psy8365 36 LLLMCLLGFGSYFCYDNPSSLEEHFTTD-MHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFG----IRMGSTIYSVLV 110 (381)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G----~r~~~~~~~~~~ 110 (381)
+...++..++.....+.....+|.+.++ .|.|..+.+.+...+.++.+++.+++|+++|| .. +|........+.
T Consensus 275 vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr-~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 275 VWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDR-LKTIFARRLLFIVFLCLY 353 (495)
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHH
Confidence 4445556666666677777778887777 56899999999999999999999999999999 63 344444443333
Q ss_pred H-HHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcc-hHHHHHHHHHHhHhhHh
Q psy8365 111 V-IGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKEL-NMVFGFQLSLSRVGSTV 177 (381)
Q Consensus 111 ~-~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r-~~~~~~~~~~~~~g~~~ 177 (381)
. +|...... .++.......-.....+.....+......++...++.| -...+....+.+.+..+
T Consensus 354 ~~~g~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~ 419 (495)
T KOG2533|consen 354 AIIGAISLLA---AAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAI 419 (495)
T ss_pred HHHHHHHHHh---hccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHh
Confidence 3 33232222 22233333333333444456666677777777655433 33344444444444433
No 257
>KOG0254|consensus
Probab=97.93 E-value=0.0005 Score=64.96 Aligned_cols=128 Identities=9% Similarity=-0.019 Sum_probs=82.0
Q ss_pred hhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccc---
Q psy8365 48 FCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVD--- 124 (381)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~--- 124 (381)
..........+.+-+..|.+... .+...+..+...++..+...+.|| +|||+.++.+...+.++.+++.......
T Consensus 309 tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~-~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~ 386 (513)
T KOG0254|consen 309 TGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDR-FGRRKLLLFGAAGMSICLVILAVVGVFALYY 386 (513)
T ss_pred hCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHhHHHHHHHHHHHHHHHHHhccC
Confidence 33344445556777777766443 444455556666777777999999 9999999999999999888766521111
Q ss_pred -----h--hHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHh
Q psy8365 125 -----S--LFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTV 177 (381)
Q Consensus 125 -----~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 177 (381)
. ...+...-+.......+..+....+.+|.+|.+-|+++.++......+...+
T Consensus 387 ~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~ 446 (513)
T KOG0254|consen 387 PNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFL 446 (513)
T ss_pred CCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHH
Confidence 1 1111112222222223333444468899999999999998887776665544
No 258
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.92 E-value=0.00011 Score=61.44 Aligned_cols=114 Identities=14% Similarity=0.156 Sum_probs=73.4
Q ss_pred HhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh--cc
Q psy8365 264 SYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH--TM 341 (381)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~ 341 (381)
......|.+..|.|. +++++|+|.++...+.....++..+ ++..|.+.||+|.+..+.+.+... ..+...... ..
T Consensus 13 ~~~Gt~Y~Fs~yS~~-Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~-~~GY~~~~l~~~~ 89 (250)
T PF06813_consen 13 LCSGTTYTFSAYSPQ-LKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLG-FVGYGLLWLAVSG 89 (250)
T ss_pred HhcCcccchhhhhHH-HHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHH-HHHHHHHHHHHhC
Confidence 344566777778776 7788999999999999998888876 578899999999888855544444 444444332 11
Q ss_pred ----chhHHHHHHHHHH---HHhhhcchhhhhhhcccCCcccccccC
Q psy8365 342 ----IDPHITMVMMGIA---YSMVASGLWPLIALVIPEYQLGTAYGM 381 (381)
Q Consensus 342 ----~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~p~~~~g~~~g~ 381 (381)
...+...+...++ .....+.......+.+|+ +||++.|+
T Consensus 90 ~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgi 135 (250)
T PF06813_consen 90 RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGI 135 (250)
T ss_pred ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehh
Confidence 1122222222222 222334445556678885 69999874
No 259
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.91 E-value=6e-06 Score=79.44 Aligned_cols=110 Identities=11% Similarity=0.043 Sum_probs=79.9
Q ss_pred cchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhc----------
Q psy8365 271 PFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHT---------- 340 (381)
Q Consensus 271 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---------- 340 (381)
++....-+-++++++++..+.|++.+...++..++.++.+++.||.+||+.+.+..++.++.+++.....
T Consensus 50 g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~ 129 (633)
T TIGR00805 50 GLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYST 129 (633)
T ss_pred HHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccc
Confidence 3333333447788999999999999999999999999999999999998885555444444333332110
Q ss_pred ------------------------------------------cchhHHHHHHHHHHHHhhhcchhhhhhhcccCCccccc
Q psy8365 341 ------------------------------------------MIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQLGTA 378 (381)
Q Consensus 341 ------------------------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~ 378 (381)
.....+.-++.|++.+...+...+++.|.+|+++|+++
T Consensus 130 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~ 209 (633)
T TIGR00805 130 TVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLY 209 (633)
T ss_pred cccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHH
Confidence 00122345566777777788889999999999999987
Q ss_pred cc
Q psy8365 379 YG 380 (381)
Q Consensus 379 ~g 380 (381)
.|
T Consensus 210 ~~ 211 (633)
T TIGR00805 210 IG 211 (633)
T ss_pred HH
Confidence 65
No 260
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.79 E-value=0.02 Score=51.94 Aligned_cols=259 Identities=10% Similarity=0.001 Sum_probs=133.6
Q ss_pred HHHhhhcC---ChHHHHHHHHHhhh-hhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhc------------
Q psy8365 59 HFTTDMHL---TNAQYMNLYSWYSW-PNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAY------------ 122 (381)
Q Consensus 59 ~~~~~~~~---s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~------------ 122 (381)
.+++.+.+ +++.+.++-+..-+ +..+..++..++.++ +.+++++-.....+...-+++++-.+
T Consensus 48 ~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~-lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~ 126 (509)
T COG3202 48 SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNI-LTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEF 126 (509)
T ss_pred HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHH
Confidence 45555543 46667888777777 667788899999999 99999887766666555444443211
Q ss_pred c-------c----------hhHHHHHHHHHHhccchhhhh-hhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHH
Q psy8365 123 V-------D----------SLFITILGRFIFGIGGESLAV-AQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEP 184 (381)
Q Consensus 123 ~-------~----------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 184 (381)
+ + +.|..-+..++.-+-...... .-.....|.+..+|-.|..++++.+.+++..++..+..+
T Consensus 127 ~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~ 206 (509)
T COG3202 127 SRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSW 206 (509)
T ss_pred HHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1 112222222332222122222 334667788888999999999999999999988777777
Q ss_pred HHhhhhccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhh---HH---HhhhcccCccccc----ccccccccCcc
Q psy8365 185 LYKYVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGCMDKRA---ER---ILNRRNAGETEVA----RLSDVKHFPVS 254 (381)
Q Consensus 185 l~~~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~----~~~~~~~~~~~ 254 (381)
+.++........=.. .+..+..+....+++.....++.++.. +. +..+++++++.+. +.+.+.+ .|-
T Consensus 207 ~~k~~~~~~~~~~~~--~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~kk~~~k~k~~~~~s~k~i~~-Sky 283 (509)
T COG3202 207 LSKHRDALASEFKDL--LLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKKKKKKKKLKLGLIESFKMILR-SKY 283 (509)
T ss_pred HhhchhhHhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhcccccccccCcHHHHHHHHHh-hhH
Confidence 765332100000000 122222222223333333322222211 11 1111112222222 2333444 566
Q ss_pred hhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhh---hHHHHHHH-HhhhhhhHHHHHHhhcchHH
Q psy8365 255 FWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANR---LNSIVYTI-SAFLSPLMGLVVDKTGRNLF 321 (381)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~-~~i~~~~~g~l~dr~g~r~~ 321 (381)
++.+.+...++..+.+.+....-.-.++.+..+.+.... +....++. .++...+++.+.+|.|-...
T Consensus 284 L~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~ 354 (509)
T COG3202 284 LGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTG 354 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHH
Confidence 677777666666665555433222233333333333333 23333333 33445577788888775444
No 261
>KOG2615|consensus
Probab=97.77 E-value=8.4e-05 Score=64.52 Aligned_cols=126 Identities=13% Similarity=0.131 Sum_probs=102.8
Q ss_pred HhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcC--chhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhc
Q psy8365 61 TTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFG--IRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGI 138 (381)
Q Consensus 61 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 138 (381)
.+.+|.++.|.|-+.+...+...+.+....+..|| .. -+-.+..+..++.-..++... ++....+..+-.+..+
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~-~~~~~~a~l~~~l~~~vP~~llls~---~~~~~~l~~~s~l~sf 364 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPR-YKGNIKAVLLFSLLLIVPAFLLLSL---ARTPVVLYLGSTLKSF 364 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccc-cccchhhHHHHHHHHHHHHHHHHhc---cccchhhhHHHHHHHH
Confidence 46789999999999999888888999988899998 65 444555555444433333333 6777888999999999
Q ss_pred cchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 139 GGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
..+...+....++....|+++||.++|+......++-++||+++|.+..+..
T Consensus 365 ~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~ 416 (451)
T KOG2615|consen 365 STASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQ 416 (451)
T ss_pred HHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEec
Confidence 9888888888999999999999999999999999999999999988877654
No 262
>KOG3097|consensus
Probab=97.75 E-value=0.0042 Score=53.10 Aligned_cols=72 Identities=7% Similarity=0.038 Sum_probs=54.1
Q ss_pred hhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcc
Q psy8365 79 SWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWF 155 (381)
Q Consensus 79 ~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 155 (381)
.+..+..+++.+.+.++ +|-|+++.++.......... -+-+.+..++-.-...|++.+..+..--+++++.-
T Consensus 68 y~~l~~s~m~~~~~Ir~-~g~K~tm~lav~~Y~lyiA~----Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRF-LGTKWTMVLAVFPYALYIAA----NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHh----hcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 34445556666688999 99999999887776554321 22478889999999999999999888777777554
No 263
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.71 E-value=0.00061 Score=60.83 Aligned_cols=141 Identities=17% Similarity=0.117 Sum_probs=89.5
Q ss_pred HHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHH--HHHHHHH
Q psy8365 40 CLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLV--VIGQLVF 117 (381)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~--~~~~~~~ 117 (381)
++.++..+.......+.+ ....+..-..++.-+....|.+|-.++.--.. - +.-|++.+.+.+-. .+..++-
T Consensus 253 ~lVY~aEY~InqGv~~tl-~fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~----~-~rir~lwils~LQ~~nl~~~~l~ 326 (402)
T PF02487_consen 253 FLVYFAEYFINQGVAPTL-LFPNSFFSPRDQYRWYQLLYQLGVFISRSSLP----F-FRIRRLWILSLLQVINLVFLLLQ 326 (402)
T ss_pred HHHHHHHHHHHhchHHHh-cCCccCCCHHHHHHHHHHHHHHHHhhhhccee----e-eehhhHHHHHHHHHHHHHHHHHH
Confidence 344555555443333221 11122333455666777777776555533221 1 22344444433322 2222222
Q ss_pred HhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHH
Q psy8365 118 ALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLY 186 (381)
Q Consensus 118 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 186 (381)
+.--+.++.|..++.-+..|+..|..++.....+.|-.|+++|-.++|....+-++|..++.+++-.+-
T Consensus 327 s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 327 SWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 222335788988899999999999999999999999999999999999999999999999887776553
No 264
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.64 E-value=0.00047 Score=59.92 Aligned_cols=107 Identities=17% Similarity=0.242 Sum_probs=71.9
Q ss_pred CcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHH
Q psy8365 252 PVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSI 331 (381)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~ 331 (381)
+|+++.........-+.... |.-..+ +.+|++..+.+.++......+.+.+.+.|.+.||+|||+.-+..++.-..
T Consensus 36 qr~yl~vY~La~~aDWLQGp---Y~Y~LY-~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~ 111 (354)
T PF05631_consen 36 QRKYLLVYLLAMAADWLQGP---YLYALY-ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSL 111 (354)
T ss_pred HHHHHHHHHHHHHHHHhhcc---hhHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 45555554444443333222 222323 45899999999999999999999999999999999999997777777776
Q ss_pred HHHHHHhhccchhHHHHHHHHHHHHhhhcch
Q psy8365 332 VCHFMVGHTMIDPHITMVMMGIAYSMVASGL 362 (381)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 362 (381)
.++.-..-.....++.=++-|++.+...+..
T Consensus 112 scl~k~~~~~~~L~~GRvlgGiaTSLLfS~F 142 (354)
T PF05631_consen 112 SCLTKHSSNYPVLLLGRVLGGIATSLLFSAF 142 (354)
T ss_pred HHHHHhccccHHHHHHHHHHHHHHHHHHHHH
Confidence 6654433333344455566677776655544
No 265
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.56 E-value=0.00095 Score=62.90 Aligned_cols=149 Identities=14% Similarity=0.091 Sum_probs=102.7
Q ss_pred HHHHHHHHhhhhhhcCchhhHHHHHh-hhcCCh---HHHHHHHHHhhhhhhHHhhhhhhhhhhhcCc-hhhhHHHHHHHH
Q psy8365 37 LLMCLLGFGSYFCYDNPSSLEEHFTT-DMHLTN---AQYMNLYSWYSWPNVICCFIGGFLIDRVFGI-RMGSTIYSVLVV 111 (381)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~---~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~-r~~~~~~~~~~~ 111 (381)
....+..++.++.........|.... -|+-+. .+.++......++..+++.+.|.+..+ ++| |+.++++.+++.
T Consensus 313 ~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~-ir~~Kw~li~~~~~~t 391 (599)
T PF06609_consen 313 AALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSK-IRHIKWQLIFGSVLMT 391 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHH-ccchhHHHHHHHHHHH
Confidence 33333344444344444444555433 344333 357788888888999999999999998 776 445556766665
Q ss_pred HHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHh
Q psy8365 112 IGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYK 187 (381)
Q Consensus 112 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (381)
++..+++. .-.+|....+..-++.|++.|...........-..|+++-+.+.++..+.-.+|..+|..+-..+..
T Consensus 392 a~~Gama~-~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 392 AFCGAMAA-VRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred HHHHHHHH-ccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 54443332 2245666667788899999998888888888888899999999999999999999998776655543
No 266
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.53 E-value=0.0075 Score=55.35 Aligned_cols=90 Identities=13% Similarity=0.001 Sum_probs=49.6
Q ss_pred hhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchhhHHHH
Q psy8365 125 SLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQTLGIVL 204 (381)
Q Consensus 125 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~~~~~~ 204 (381)
.++..++.-++.|++.+..+....++.+ .+|++ .++.+..+.+++++++.++- .+..........-......++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~~-ii~~a~~~~~~~~~~~a~~YF 178 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLAM-ILVKASGNDSHGLKKSALGYF 178 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHHH-HHHHHhcCCccchhhhhhhHH
Confidence 5667777788889998888888877776 45644 35555566666666655442 222222111000122223455
Q ss_pred HHHHHHHHHHHHHHHh
Q psy8365 205 LLAGMTCVLSLLCSLL 220 (381)
Q Consensus 205 ~~~~~~~~~~~~~~~~ 220 (381)
.++.+..++++++...
T Consensus 179 ~~a~~v~l~~i~~~~~ 194 (437)
T TIGR00939 179 GTPCVVQLICIVCYLL 194 (437)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6665555555555443
No 267
>KOG1237|consensus
Probab=97.47 E-value=0.0042 Score=58.74 Aligned_cols=164 Identities=15% Similarity=0.194 Sum_probs=115.3
Q ss_pred hhHHHHHHHHHHHHHhhhhhh-cCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHH
Q psy8365 30 IQRVLALLLMCLLGFGSYFCY-DNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSV 108 (381)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~ 108 (381)
...|.....+.......-+.. ........++.+++|.+...+.-..+.+.-......+.++.++|-++||-+++.++.+
T Consensus 33 ~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~ 112 (571)
T KOG1237|consen 33 TGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSL 112 (571)
T ss_pred echhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 344554444433333333333 3345667788899999888888888888888888899999999987899999999999
Q ss_pred HHHHHHHHHHhhhccc----------------------hhHHHHHHHHHHhccchhhhhhhhhhhhhccc---CCc---c
Q psy8365 109 LVVIGQLVFALGAYVD----------------------SLFITILGRFIFGIGGESLAVAQNSYAVLWFK---GKE---L 160 (381)
Q Consensus 109 ~~~~~~~~~~~~~~~~----------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~~---r 160 (381)
+..+|..+....+..+ ....++.+.-+..+|.|+.-+...+.-+|.++ +++ +
T Consensus 113 i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~ 192 (571)
T KOG1237|consen 113 ISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGI 192 (571)
T ss_pred HHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCc
Confidence 9988866554422111 12356777778889999999999999999998 322 2
Q ss_pred hHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchh
Q psy8365 161 NMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQT 199 (381)
Q Consensus 161 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~ 199 (381)
...+.++....+.|..++..+....-++. +|.+
T Consensus 193 ~~fFnW~yf~~~~g~l~a~t~~vyiq~~~------~w~l 225 (571)
T KOG1237|consen 193 PSFFNWFYFSQNGGALLAQTVLVYIQDNV------GWKL 225 (571)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhhcc------ccee
Confidence 35667777777788777665555543333 6776
No 268
>KOG0255|consensus
Probab=97.42 E-value=0.011 Score=56.12 Aligned_cols=125 Identities=16% Similarity=0.048 Sum_probs=87.6
Q ss_pred HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhc
Q psy8365 59 HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGI 138 (381)
Q Consensus 59 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 138 (381)
....++|.+......+... .........+...|+ +|||.....+..+..++.+...+.......+...+...+...
T Consensus 343 ~~~~~lg~~~~~~~~~~~~---~~~p~~~~~~~~~~~-~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (521)
T KOG0255|consen 343 LNVSGLGGNIYLNFTLSGL---VELPAYFRNGLLLPE-FGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKF 418 (521)
T ss_pred hhhhhcCchHHHHHHHHHH---HHhhHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHH
Confidence 3344455444433333333 444445555899999 999999999999998888877764322221235555555555
Q ss_pred cchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHh
Q psy8365 139 GGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYK 187 (381)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 187 (381)
+.+..+.....+.+|.+|...|..+.+.......+|.+++|.+......
T Consensus 419 ~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 419 FIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 6666677778899999999999999999999999999999877655443
No 269
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.38 E-value=0.011 Score=53.94 Aligned_cols=143 Identities=13% Similarity=0.045 Sum_probs=100.3
Q ss_pred HHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHH
Q psy8365 38 LMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVF 117 (381)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~ 117 (381)
...++...-++.--.++.....+.+.-|+++.++|..-+...+....+.+...++.+| +|..|.-.++.........++
T Consensus 262 las~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~r-iGlvr~G~~~l~~q~~~L~~~ 340 (432)
T PF06963_consen 262 LASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKR-IGLVRAGLWSLWWQWVCLALC 340 (432)
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchhhHHHHHHHHHHHHHHH
Confidence 3333333344443344555555555669999999999999999999999999999999 999988777766544333333
Q ss_pred Hhhhcc-------chhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhh
Q psy8365 118 ALGAYV-------DSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFV 181 (381)
Q Consensus 118 ~~~~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 181 (381)
..+-+. .+...++.+-.+.=+|.=+......-++.|..|+++||...|......++-.++-..+
T Consensus 341 v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 341 VVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 222112 1344455555555555556667788889999999999999999999998887775544
No 270
>PRK03612 spermidine synthase; Provisional
Probab=97.38 E-value=0.018 Score=54.11 Aligned_cols=129 Identities=9% Similarity=0.045 Sum_probs=77.3
Q ss_pred HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHH---H-HHHHhhhccchh-HHHHHHH
Q psy8365 59 HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIG---Q-LVFALGAYVDSL-FITILGR 133 (381)
Q Consensus 59 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~---~-~~~~~~~~~~~~-~~l~~~r 133 (381)
.+..-+|-+..+.+.+.+.+..|.++|+.+++++.++ .-++.. .+-..+..++ . ++.....+...+ ..++...
T Consensus 40 ~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~-~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~ 117 (521)
T PRK03612 40 LASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD-AAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLV 117 (521)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444578888899999999999999999998887754 333322 1111111111 1 111111111111 1223334
Q ss_pred HHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHh-hhh
Q psy8365 134 FIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYK-YVE 190 (381)
Q Consensus 134 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~ 190 (381)
++.++..|...|....+..+... ++-+...|-......+|.++|.++.++++- ..+
T Consensus 118 ~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG 174 (521)
T PRK03612 118 LLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLG 174 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcc
Confidence 55677778888877776655332 334667788888888999998888776654 443
No 271
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.26 E-value=0.0032 Score=57.97 Aligned_cols=126 Identities=13% Similarity=0.095 Sum_probs=95.8
Q ss_pred cCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhc-------cchhHHHHHHHHHHh
Q psy8365 65 HLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAY-------VDSLFITILGRFIFG 137 (381)
Q Consensus 65 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~r~l~G 137 (381)
|.|+...|.+..+..++..++..+.....-+ ..-|+++....++.++..+.-..... .++.+-.+.--++..
T Consensus 251 ~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~-~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~ 329 (433)
T PF03092_consen 251 HFSPSFYGTLSIVGSIASLLGILLYRKYFSN-WSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEE 329 (433)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHH
Confidence 3889999999988888888988888888778 78899888887776655543221100 112222233345556
Q ss_pred ccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhc
Q psy8365 138 IGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEK 191 (381)
Q Consensus 138 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 191 (381)
+..+..+.+...+++|..|+..-|...++..+..++|..++..++..+.+.++.
T Consensus 330 ~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~v 383 (433)
T PF03092_consen 330 VIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGV 383 (433)
T ss_pred HHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 665677777888999999999999999999999999999999999999888764
No 272
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.25 E-value=0.0024 Score=52.87 Aligned_cols=103 Identities=13% Similarity=0.143 Sum_probs=48.2
Q ss_pred CcchHHHHHHHHHHhHhhHhhhhhhHHHHh-hhhccccccchhhHHHHHHHHHHHHHHHHHHHhhcc-cchhhHH-Hhhh
Q psy8365 158 KELNMVFGFQLSLSRVGSTVNMFVAEPLYK-YVEKFGLIGYQTLGIVLLLAGMTCVLSLLCSLLLGC-MDKRAER-ILNR 234 (381)
Q Consensus 158 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~~~~~~gWr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~ 234 (381)
|+|+....+...+.++|.++.... ++.. .........|++ +.-+.+++.. +.++...++-. .+...++ ..++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ip--F~~~~~~~~~~~~~W~~--I~si~~lL~~-IpLIly~ifGk~fd~~~~~~k~~k 76 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIP--FLISSSVVIALTNNWQW--ILSIFILLIF-IPLILYIIFGKNFDIYSPKEKQEK 76 (267)
T ss_pred CccceeeeeccccchhhHHHHHhh--HHhcchHHHHHHHHHHH--HHHHHHHHHH-HHHHHHHHhcccccccCccccccc
Confidence 567777777777888887765432 2222 111111125888 4444433222 22222222111 1111111 0111
Q ss_pred cccCcccccccccccccCcchhhHHHHHHHhh
Q psy8365 235 RNAGETEVARLSDVKHFPVSFWMVVVIIVSYY 266 (381)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (381)
++.+.+++.+..+++| +|..|...+.+....
T Consensus 77 ~~~~~~~~~s~~~~LK-~K~tw~w~~~Yg~wL 107 (267)
T PF07672_consen 77 ENSTLSKKPSYKSILK-EKETWKWILIYGIWL 107 (267)
T ss_pred ccccccccchHHHHHc-cchHHHHHHHHHHHh
Confidence 1222234466777888 788888776666544
No 273
>KOG3098|consensus
Probab=97.04 E-value=0.08 Score=48.47 Aligned_cols=103 Identities=19% Similarity=0.261 Sum_probs=76.2
Q ss_pred HhhhhhhHHhhhhhhhhh---hhcCchhhhHHHHHHHHHHHHHHHhhhc---------------cchhHHHHHHHHHHhc
Q psy8365 77 WYSWPNVICCFIGGFLID---RVFGIRMGSTIYSVLVVIGQLVFALGAY---------------VDSLFITILGRFIFGI 138 (381)
Q Consensus 77 ~~~~~~~~~~~~~g~l~d---r~~G~r~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~l~~~r~l~G~ 138 (381)
...++..++..+.+.+.+ | +||++.+.++..+..++.++...... .+++....+.-++.|+
T Consensus 287 ~~g~g~v~~g~~~~~l~~rir~-fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~ 365 (461)
T KOG3098|consen 287 GIGLGEVIGGLDFSILSKRIRG-FGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGF 365 (461)
T ss_pred HHhHHHHHHHHHHHHHhhhhhh-cccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhh
Confidence 344455555566666664 5 78899999988888877776544211 1246677788899999
Q ss_pred cchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhh
Q psy8365 139 GGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFV 181 (381)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 181 (381)
+.+......+.++++.. +++|..+.++.-.-..++..++...
T Consensus 366 ~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 366 GDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred HHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999 4888999888888888877764433
No 274
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.03 E-value=0.14 Score=46.97 Aligned_cols=140 Identities=16% Similarity=0.114 Sum_probs=78.1
Q ss_pred HHHHHHHHhhhhhhcCchhhHHHHHhh--hcCChHHHHHHHHHhhhhhhHHhhhhhhhhh-----hhcCchhhhHHHHHH
Q psy8365 37 LLMCLLGFGSYFCYDNPSSLEEHFTTD--MHLTNAQYMNLYSWYSWPNVICCFIGGFLID-----RVFGIRMGSTIYSVL 109 (381)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-----r~~G~r~~~~~~~~~ 109 (381)
.++.+.++.++.-.+......|.+.++ -+.|.+|.|.. |.....+.+ .++|.++.| | +||||..++=.-.
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~f-Sla~~PfSl-KlLWaPiVDs~y~~~-~GRRKSWiiP~Q~ 79 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIF-SLASYPFSL-KLLWAPIVDSVYSKR-IGRRKSWIIPIQY 79 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhHheee-eeeechhHH-HHhhhhhhhhhcccc-cCCcchhhhHHHH
Confidence 345566777776666654455888877 68888888764 333333332 567777777 7 8999987764322
Q ss_pred HHHHHHHHHhhhcc---------------------chh--HHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHH
Q psy8365 110 VVIGQLVFALGAYV---------------------DSL--FITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGF 166 (381)
Q Consensus 110 ~~~~~~~~~~~~~~---------------------~~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 166 (381)
. .|..+...+... ++. ..+....++.=+-.+....+...+.-....+++++.+...
T Consensus 80 l-~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTc 158 (544)
T PF13000_consen 80 L-SGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTC 158 (544)
T ss_pred H-HHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHH
Confidence 2 122222111111 011 1222333233333355555666666666677888777766
Q ss_pred HHHHHhHhhHhhhh
Q psy8365 167 QLSLSRVGSTVNMF 180 (381)
Q Consensus 167 ~~~~~~~g~~~g~~ 180 (381)
...+.+.|..++..
T Consensus 159 qtvG~~~Gyfls~t 172 (544)
T PF13000_consen 159 QTVGQTAGYFLSFT 172 (544)
T ss_pred HHhHhhhhHHHHHH
Confidence 66666666655543
No 275
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.92 E-value=0.0077 Score=46.45 Aligned_cols=86 Identities=15% Similarity=0.107 Sum_probs=60.0
Q ss_pred HHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHhhhcchhhhhhhcccCCc
Q psy8365 295 NSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGHTMIDPHITMVMMGIAYSMVASGLWPLIALVIPEYQ 374 (381)
Q Consensus 295 ~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 374 (381)
.++......+..++.+.+.+++|.|+.+++.+..-.+-....+....+..+...++.|++.+...+..-.++.+..+++.
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~ 122 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEET 122 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHH
Confidence 45556667778888889999999988855554444322222222234556677788899999888777888888888887
Q ss_pred cccccc
Q psy8365 375 LGTAYG 380 (381)
Q Consensus 375 ~g~~~g 380 (381)
+++-.|
T Consensus 123 ~~~~~~ 128 (156)
T PF05978_consen 123 IGRNTG 128 (156)
T ss_pred HhhHHH
Confidence 777554
No 276
>KOG2325|consensus
Probab=96.89 E-value=0.0022 Score=58.55 Aligned_cols=64 Identities=9% Similarity=0.175 Sum_probs=52.3
Q ss_pred HHHHHHHH-HHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 127 FITILGRF-IFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 127 ~~l~~~r~-l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
+.+++... +.|.+.-.......++-+|...|++++.+.++++.....+..++|.+........+
T Consensus 388 ~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g 452 (488)
T KOG2325|consen 388 ILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSG 452 (488)
T ss_pred hhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcC
Confidence 34455544 44777777777888999999999999999999999999999999998888877764
No 277
>KOG2563|consensus
Probab=96.82 E-value=0.0024 Score=57.07 Aligned_cols=137 Identities=9% Similarity=0.057 Sum_probs=81.6
Q ss_pred CchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCc-hhhhHHHHHHHHHHHHHH-HhhhccchhHHH
Q psy8365 52 NPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGI-RMGSTIYSVLVVIGQLVF-ALGAYVDSLFIT 129 (381)
Q Consensus 52 ~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~-r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l 129 (381)
.....+....+.-|.+....|++.....++..+++...|.+.|| ... |++.++......++.... ...-...+.+.+
T Consensus 284 ~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dk-tk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv 362 (480)
T KOG2563|consen 284 SLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADK-TKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIV 362 (480)
T ss_pred HHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhh-hhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEeh
Confidence 33333333334445566788999999999999999999999999 554 444444444444442211 111122344556
Q ss_pred HHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 130 ILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 130 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
+..-.+.|++.....|...-+-.|..-|..-+.-.|+.+....+=..+-..+-+...+..
T Consensus 363 ~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~ 422 (480)
T KOG2563|consen 363 FTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDL 422 (480)
T ss_pred hhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhcc
Confidence 667777888878888888877777664444455555555444443344343444444433
No 278
>KOG0637|consensus
Probab=96.81 E-value=0.0014 Score=58.59 Aligned_cols=125 Identities=14% Similarity=0.102 Sum_probs=86.4
Q ss_pred chhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhh----cchHHHHHHHHHH
Q psy8365 254 SFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKT----GRNLFWVFISLMV 329 (381)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~----g~r~~~~~~~~~~ 329 (381)
.........+...+++..-..|.++|+++ .|.+....+......-+.+.+.+++.|..+||. ||||..+..+...
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccchHHHhhHH
Confidence 34444555555666766677889998876 799998888888888888999999999999984 7899888877777
Q ss_pred HHHHHHHHhhcc----------c--hhHHHHHHHHHH-------HHhhhcchhhhhhhcccCCcccc-cc
Q psy8365 330 SIVCHFMVGHTM----------I--DPHITMVMMGIA-------YSMVASGLWPLIALVIPEYQLGT-AY 379 (381)
Q Consensus 330 ~~~~~~~~~~~~----------~--~~~~~~~~~g~~-------~~~~~~~~~~~~~~~~p~~~~g~-~~ 379 (381)
..+++.++.+.. . .....+.++.++ ........-++..|+..++++.+ ++
T Consensus 112 i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~An 181 (498)
T KOG0637|consen 112 IAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRAN 181 (498)
T ss_pred HHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccc
Confidence 777777665511 0 111223333333 23345666888999887766665 44
No 279
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.22 E-value=0.036 Score=37.55 Aligned_cols=68 Identities=13% Similarity=0.096 Sum_probs=50.2
Q ss_pred hcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh
Q psy8365 270 FPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH 339 (381)
Q Consensus 270 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 339 (381)
+.+...+|. ++++.++|..+.+++.+...++..+|.+...++.++.++++. +..+.............
T Consensus 9 FayTplLP~-M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~-~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 9 FAYTPLLPL-MQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRL-LRAGLLLTVLSTAAMAL 76 (85)
T ss_pred HHHHhHhHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH-HHHHHHHHHHHHHHHHH
Confidence 444555666 667789999999999999999999999999988888554544 55555555555555444
No 280
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.99 E-value=0.0018 Score=61.07 Aligned_cols=155 Identities=14% Similarity=0.220 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhhhhhcCchhhHH-HHHhhhcCChHHHHHHHHHhhh-hhhHHhhhhhhhhhhhcCc--hhhhHHHHHH
Q psy8365 34 LALLLMCLLGFGSYFCYDNPSSLEE-HFTTDMHLTNAQYMNLYSWYSW-PNVICCFIGGFLIDRVFGI--RMGSTIYSVL 109 (381)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~~G~--r~~~~~~~~~ 109 (381)
.++....++..........+....| +++.+|+.++++.+++.+...+ +.+++.+++|++..| +.. |+.+....+.
T Consensus 305 p~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk-~kl~~~~~~~~~~v~ 383 (539)
T PF03137_consen 305 PVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKK-FKLSARGAAKFCIVV 383 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEE-ecCcHHHHHHHHHHH
Confidence 3445555555555555555555554 6778999999999998877666 667889999999999 743 4444443333
Q ss_pred HHHHHHHHHh-----------h----hc------------------------------------cchhHHHHHHHHHHhc
Q psy8365 110 VVIGQLVFAL-----------G----AY------------------------------------VDSLFITILGRFIFGI 138 (381)
Q Consensus 110 ~~~~~~~~~~-----------~----~~------------------------------------~~~~~~l~~~r~l~G~ 138 (381)
..++.+.... . .. .+.+..+++..++.-+
T Consensus 384 ~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~ 463 (539)
T PF03137_consen 384 SIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSF 463 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHH
Confidence 3333222000 0 00 0123345555555545
Q ss_pred cchhhhhhhhhhhhhcccCCcchHHHHHHHHHHh-HhhHhhhhhhHHHHhhh
Q psy8365 139 GGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSR-VGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 139 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~-~g~~~g~~~~~~l~~~~ 189 (381)
..+...++....+-+.+|+++|+.++|+...... +|.+-||++-|.+.+..
T Consensus 464 ~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 464 FTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ----------------------------------------------------
T ss_pred HHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 5455566666666688899999999999987655 67788888888887743
No 281
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=95.60 E-value=0.092 Score=50.90 Aligned_cols=106 Identities=9% Similarity=0.145 Sum_probs=73.6
Q ss_pred hhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhh-cchHHHHHHHHHHHHHHHHHHhhcc-----
Q psy8365 268 SIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKT-GRNLFWVFISLMVSIVCHFMVGHTM----- 341 (381)
Q Consensus 268 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~----- 341 (381)
.++++...+..|+.+..|++...+..+........-+..+++|++.|++ |+++.+...+++ ..++..++....
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii-~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIV-YVVGHALLSFGAIPSSG 80 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH-HHHHHHHHHhccCcccc
Confidence 4567777788888888999999888888888777788888999999986 666664444443 344444443311
Q ss_pred -----chhHHHHHHHHHHHHhhhcchhhhhhhcccCCc
Q psy8365 342 -----IDPHITMVMMGIAYSMVASGLWPLIALVIPEYQ 374 (381)
Q Consensus 342 -----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 374 (381)
...+..+.+.++|.+.+-|...+...|.+++++
T Consensus 81 ~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~ 118 (654)
T TIGR00926 81 HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQ 118 (654)
T ss_pred cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccc
Confidence 013344556666667777888888888887543
No 282
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.51 E-value=0.21 Score=46.06 Aligned_cols=112 Identities=12% Similarity=0.034 Sum_probs=73.6
Q ss_pred HHHHHHHhhhhhhHHhhhhhhhhhhhcCch--hhhHHHHHHHHHHHHHHHhhh---------ccchhHHHHHHHHHHhcc
Q psy8365 71 YMNLYSWYSWPNVICCFIGGFLIDRVFGIR--MGSTIYSVLVVIGQLVFALGA---------YVDSLFITILGRFIFGIG 139 (381)
Q Consensus 71 ~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r--~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~~r~l~G~~ 139 (381)
.-.....++++-.+|..+..+.. . -++| ++.+ ..+.-.+..-++.++. +-++-+..++..++.|+.
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~-p~~~~~~l~i-~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~glt 385 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-W-PDEDSRWLPI-LSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFS 385 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-e-eCCCccchHH-HHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHh
Confidence 34566777888888877554321 1 1222 3332 2222222222222211 224666677779999999
Q ss_pred chhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHH
Q psy8365 140 GESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPL 185 (381)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 185 (381)
.|-....+..+..+..++++|..+..+...+..+|..+|..++-.+
T Consensus 386 nGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 386 NGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998887665433
No 283
>KOG3626|consensus
Probab=95.36 E-value=0.36 Score=46.80 Aligned_cols=153 Identities=18% Similarity=0.200 Sum_probs=98.6
Q ss_pred HHHHHHHHHHhhhhhhcCchhhHH-HHHhhhcCChHHHHHHHHHhhhh-hhHHhhhhhhhhhhhcC--chhhhHHHHHHH
Q psy8365 35 ALLLMCLLGFGSYFCYDNPSSLEE-HFTTDMHLTNAQYMNLYSWYSWP-NVICCFIGGFLIDRVFG--IRMGSTIYSVLV 110 (381)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~-~~~~~~~~g~l~dr~~G--~r~~~~~~~~~~ 110 (381)
++.+..++..........+...+| +++++|+.+++.+..+.+...+. .++|.+++|++..| +. .|....+.++..
T Consensus 393 if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikk-fkl~~r~~a~~~~~~~ 471 (735)
T KOG3626|consen 393 IFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKK-FKLSARGAAKFVIVCS 471 (735)
T ss_pred hHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeee-ecccHHHHHHHHHHHH
Confidence 344445555555555544445555 77889999999999988665554 46778889999998 64 344444444444
Q ss_pred HHHHHHHHhhhcc-------------------------------------------------------------------
Q psy8365 111 VIGQLVFALGAYV------------------------------------------------------------------- 123 (381)
Q Consensus 111 ~~~~~~~~~~~~~------------------------------------------------------------------- 123 (381)
.+..+.+....+.
T Consensus 472 ~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~ 551 (735)
T KOG3626|consen 472 VLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTS 551 (735)
T ss_pred HHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCC
Confidence 3333321110000
Q ss_pred ------------c--------------------hhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHH
Q psy8365 124 ------------D--------------------SLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLS 171 (381)
Q Consensus 124 ------------~--------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 171 (381)
+ .+..+++..++.-+..+...++...++-+.+|+|+|..++|+..+..
T Consensus 552 ~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~i 631 (735)
T KOG3626|consen 552 DGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLI 631 (735)
T ss_pred CCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHH
Confidence 0 12234444444444445555667777778999999999999998876
Q ss_pred h-HhhHhhhhhhHHHHhh
Q psy8365 172 R-VGSTVNMFVAEPLYKY 188 (381)
Q Consensus 172 ~-~g~~~g~~~~~~l~~~ 188 (381)
. +|.+-+|++-|++++.
T Consensus 632 rllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 632 RLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred HHHhcCCchHhhhhhHhh
Confidence 6 6888899999999874
No 284
>KOG4830|consensus
Probab=95.20 E-value=0.00067 Score=55.71 Aligned_cols=68 Identities=12% Similarity=0.074 Sum_probs=49.2
Q ss_pred ccccccccccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhh
Q psy8365 240 TEVARLSDVKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPL 308 (381)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 308 (381)
..+..|...++ +-.++...+.+++.-...+.-..|++.|..++.+++....+++-.+..+.+...+.+
T Consensus 189 ~~Rm~W~~WF~-~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v 256 (412)
T KOG4830|consen 189 LVRMHWTSWFG-HVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMV 256 (412)
T ss_pred hhcccchhhhh-hhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhh
Confidence 33455666666 677788888888877777777888888888877777777777777777766655553
No 285
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=94.68 E-value=0.24 Score=42.63 Aligned_cols=103 Identities=19% Similarity=0.127 Sum_probs=61.7
Q ss_pred hhHHHHHHHhcCCCh--hhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHhh-cc---chhHHH
Q psy8365 274 SLAQELFVKRFNLDS--DAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVCHFMVGH-TM---IDPHIT 347 (381)
Q Consensus 274 ~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~ 347 (381)
...+.+..+ .+.+. ...+.......+...++.+..|.+.||.|||+........ ...+...... .. ......
T Consensus 23 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 100 (338)
T COG0477 23 PALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLL-FLLGTLLLALAPNVGLALLLIL 100 (338)
T ss_pred HHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHH-HHHHHHHHHhCccchHHHHHHH
Confidence 344444433 44444 4678888888888888889999999999888554433322 2222222222 11 122222
Q ss_pred HHHHHHHHHhhhcchhhhhhhcccC-Cccccc
Q psy8365 348 MVMMGIAYSMVASGLWPLIALVIPE-YQLGTA 378 (381)
Q Consensus 348 ~~~~g~~~~~~~~~~~~~~~~~~p~-~~~g~~ 378 (381)
....|++.+...+...++..|..|+ +.|+..
T Consensus 101 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (338)
T COG0477 101 RLLQGLGGGGLLPVASALLSEWFPEATERGLA 132 (338)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhcCchhHHHHH
Confidence 3335666666778888999999887 445543
No 286
>KOG1479|consensus
Probab=94.03 E-value=0.76 Score=41.29 Aligned_cols=110 Identities=14% Similarity=0.022 Sum_probs=76.0
Q ss_pred HHHHHHHH-hhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHh------hhccchhHHHHHHHHHHhccchh
Q psy8365 70 QYMNLYSW-YSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFAL------GAYVDSLFITILGRFIFGIGGES 142 (381)
Q Consensus 70 ~~g~~~s~-~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~r~l~G~~~~~ 142 (381)
..-.+... +++...+|.+...++-++ +||+..+...+=. +..-++.+ ...-++-+++...-.+.|+..|=
T Consensus 283 y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~v~lR~-lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGY 359 (406)
T KOG1479|consen 283 YALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIPVLLRL-LFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGY 359 (406)
T ss_pred hHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHHHHHHH-HHHHHHHHhccCCCCceecCchHHHHHHHHHHhccch
Confidence 34445555 888888888887777776 5565544433322 22222221 12246777888899999999998
Q ss_pred hhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhh
Q psy8365 143 LAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVA 182 (381)
Q Consensus 143 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 182 (381)
.......+..+-.|++++-.+-.+.......|...|..++
T Consensus 360 ltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 360 LTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred HhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 8888999999999989888888777777777777766544
No 287
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=92.50 E-value=0.039 Score=48.34 Aligned_cols=110 Identities=15% Similarity=0.064 Sum_probs=3.7
Q ss_pred HHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhh----------hccchhHHHHHHHHHHhccchh
Q psy8365 73 NLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALG----------AYVDSLFITILGRFIFGIGGES 142 (381)
Q Consensus 73 ~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~r~l~G~~~~~ 142 (381)
.....++++..+|....++.--+.-.+|++.. ..+.-.+..-++..+ ...+|-+..++.-++.|+..|-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~-~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWI-LSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHH-HHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 34667888888888877764211002444433 222222211111111 1124556677788899999999
Q ss_pred hhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhH
Q psy8365 143 LAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAE 183 (381)
Q Consensus 143 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 183 (381)
.......+..+..++++|..+-.+......+|..+|..++-
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp --HHHH-----------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988888888888888776543
No 288
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=91.86 E-value=0.045 Score=47.98 Aligned_cols=85 Identities=9% Similarity=-0.076 Sum_probs=3.4
Q ss_pred hHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHH--HHHHHHHHHHHhh------------ccchhHHHHHHHHHHHHhhh
Q psy8365 294 LNSIVYTISAFLSPLMGLVVDKTGRNLFWVFIS--LMVSIVCHFMVGH------------TMIDPHITMVMMGIAYSMVA 359 (381)
Q Consensus 294 ~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~--~~~~~~~~~~~~~------------~~~~~~~~~~~~g~~~~~~~ 359 (381)
......++..+|+.+.++..-+..+++.+.... =...+..+++... +++...+.+.++|+..|...
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 455678889999987776432211233322221 1111111111101 22334456778888888888
Q ss_pred cchhhhhhhcccCCccccc
Q psy8365 360 SGLWPLIALVIPEYQLGTA 378 (381)
Q Consensus 360 ~~~~~~~~~~~p~~~~g~~ 378 (381)
+....+..+.+++++|..+
T Consensus 267 tl~m~~~p~~v~~~e~e~a 285 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELA 285 (309)
T ss_dssp HHHH---------------
T ss_pred hceeeeCCCcCCHHHHHHH
Confidence 8888888898887776554
No 289
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=91.24 E-value=2.1 Score=38.89 Aligned_cols=102 Identities=12% Similarity=0.137 Sum_probs=73.5
Q ss_pred hHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhh
Q psy8365 68 NAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQ 147 (381)
Q Consensus 68 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 147 (381)
..--|.+-++..+..+++.+..|++..+ +.+-.-+.++..-..-+..++ ..++.+|.+..+++.++.+.......+.+
T Consensus 284 ~vYNG~VeA~~tllgA~~al~~g~v~~~-w~~~~~l~l~~~S~l~a~~L~-lm~~t~~Iwv~Y~~yIif~~~y~fliTiA 361 (412)
T PF01770_consen 284 SVYNGAVEAASTLLGAIAALLAGYVKVN-WDRWGELALGVFSLLQAGLLF-LMSFTGNIWVCYAGYIIFRSLYMFLITIA 361 (412)
T ss_pred cccchHHHHHHHHHHHHHHHHHhHhhcc-hHHHHHHHHHHHHHHHHHHHH-HHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345888888888889999999999777 776554444444333333333 33558899999999999988878888888
Q ss_pred hhhhhhcccCCcchHHHHHHHHHH
Q psy8365 148 NSYAVLWFKGKELNMVFGFQLSLS 171 (381)
Q Consensus 148 ~~~i~~~~~~~~r~~~~~~~~~~~ 171 (381)
..-++....+++-+..+|+.....
T Consensus 362 ~~qIA~~l~~e~yaLVFGiNtf~A 385 (412)
T PF01770_consen 362 SFQIAKNLSEERYALVFGINTFVA 385 (412)
T ss_pred HHHHHHhccccceeeeeeeHHHHH
Confidence 888888777777788777665443
No 290
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=89.53 E-value=4 Score=38.71 Aligned_cols=32 Identities=13% Similarity=0.060 Sum_probs=14.7
Q ss_pred CChhhhhhhHHHH----HHHHhhhhhhHHHHHHhhc
Q psy8365 286 LDSDAANRLNSIV----YTISAFLSPLMGLVVDKTG 317 (381)
Q Consensus 286 ~~~~~~~~~~~~~----~~~~~i~~~~~g~l~dr~g 317 (381)
.++..-|.+.... .+.+.+++...+++-+.++
T Consensus 290 ~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~ 325 (521)
T PF02990_consen 290 LSPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFG 325 (521)
T ss_pred ccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcC
Confidence 3444444444444 3444444445555555454
No 291
>KOG3880|consensus
Probab=89.23 E-value=0.43 Score=40.95 Aligned_cols=102 Identities=13% Similarity=0.130 Sum_probs=61.1
Q ss_pred HHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhh
Q psy8365 71 YMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSY 150 (381)
Q Consensus 71 ~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 150 (381)
.|.+.-+-.+...+..+.+....|| +---.-..+..++.+.+..+. +++++.++-+.+..+..++.|.....-.++
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~r-fpf~~Ri~~~v~~sa~s~~lV---afs~s~~~sL~GV~~aSissGlGEiTFL~l 139 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHR-FPFGFRIALVVLLSALSFFLV---AFSNSVPMSLLGVVFASISSGLGEITFLAL 139 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhh-cccchHHHHHHHHHhcceEEE---EeccchhHHHhhhhhhhhcCCcceeehhhh
Confidence 3555555666777777777888888 543322233344444454433 458889999999999888877666555444
Q ss_pred hhhcccCCcchHHHHHHHHHHhHhhHhhhhh
Q psy8365 151 AVLWFKGKELNMVFGFQLSLSRVGSTVNMFV 181 (381)
Q Consensus 151 i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 181 (381)
-+ .+| ....+-++.+.+.++++|..-
T Consensus 140 ss-~Y~----~~~i~~WSSGTGgAGliGa~S 165 (409)
T KOG3880|consen 140 SS-RYP----SIVIAGWSSGTGGAGLIGASS 165 (409)
T ss_pred hc-cCC----CceeccccCCCCcchhhhhhH
Confidence 33 333 233455555665556665543
No 292
>KOG4332|consensus
Probab=89.16 E-value=6.5 Score=33.43 Aligned_cols=102 Identities=9% Similarity=0.056 Sum_probs=64.5
Q ss_pred HHHHHHHhhhhhhHHhhhhhhhhhhhcCch--hhhHHHHHHHHHHHHHHHhhh-cc---chhHHHHHHHHHHhccchhhh
Q psy8365 71 YMNLYSWYSWPNVICCFIGGFLIDRVFGIR--MGSTIYSVLVVIGQLVFALGA-YV---DSLFITILGRFIFGIGGESLA 144 (381)
Q Consensus 71 ~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r--~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~l~~~r~l~G~~~~~~~ 144 (381)
-|.+.+.+++...+++-+..++..| -.+| ..+.+..++..+...+..... .+ .+...=+++..+.-.+.|..+
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~-s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfw 362 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSR-SSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFW 362 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhc-CCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcc
Confidence 4888889999999998888888877 5544 233333333332222222211 11 122223455555556668889
Q ss_pred hhhhhhhhhcccCCcchHHHHHHHHHHhH
Q psy8365 145 VAQNSYAVLWFKGKELNMVFGFQLSLSRV 173 (381)
Q Consensus 145 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 173 (381)
|....+=++..|++.|+..+.++-.-.++
T Consensus 363 PSimkmRsqyIPEearstimNfFRvPLni 391 (454)
T KOG4332|consen 363 PSIMKMRSQYIPEEARSTIMNFFRVPLNI 391 (454)
T ss_pred hHHHHHHHhhCCHHHHhhhhhheechhhH
Confidence 99999999999999999888776554443
No 293
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=86.41 E-value=7 Score=32.94 Aligned_cols=105 Identities=10% Similarity=-0.097 Sum_probs=50.1
Q ss_pred HHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhH----HHHHHHHHHHHHHHhhhccc--hhHHHHHHHHHHhccchhhhh
Q psy8365 72 MNLYSWYSWPNVICCFIGGFLIDRVFGIRMGST----IYSVLVVIGQLVFALGAYVD--SLFITILGRFIFGIGGESLAV 145 (381)
Q Consensus 72 g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~ 145 (381)
....-.+..+..++....|.....-+.||+-+. .+.+...+..+.....+..+ ++..+++.-++.|.+.=+.++
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 344445666666777777887765244454332 22333333333211212122 356677777777776433333
Q ss_pred hhhhhhhhcccCCcchHHHHHHHHHHhHhhHh
Q psy8365 146 AQNSYAVLWFKGKELNMVFGFQLSLSRVGSTV 177 (381)
Q Consensus 146 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 177 (381)
. .-.+.+-+++.++.+.--..+..+++|.+.
T Consensus 224 V-iL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 224 V-ILNLPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred H-HhcChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 3 233344443333333333344455555443
No 294
>KOG3880|consensus
Probab=85.43 E-value=3.3 Score=35.84 Aligned_cols=65 Identities=14% Similarity=0.053 Sum_probs=55.5
Q ss_pred hccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHH
Q psy8365 121 AYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPL 185 (381)
Q Consensus 121 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 185 (381)
.+.++++...+.-+..|+-.|..++...--+.+-.++++|-.+++....+-++|..++..++-.+
T Consensus 337 ~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 337 WFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 34788988888888899998999998888888888889999999999999999988877666544
No 295
>KOG3574|consensus
Probab=81.16 E-value=9.1 Score=34.38 Aligned_cols=70 Identities=14% Similarity=0.150 Sum_probs=43.0
Q ss_pred CcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHH-----hhcchHHHHHH
Q psy8365 252 PVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVD-----KTGRNLFWVFI 325 (381)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~d-----r~g~r~~~~~~ 325 (381)
++++..+...+..+....... .-.|.++ +..|.|-...+.......= .---+++..+.| |+||||..++=
T Consensus 30 ~~~illLl~LYllQGiP~GL~-~~iP~lL-~ak~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLI-GAIPLLL-QAKGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHh-hhhHHHh-cCCCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhhccccceeee
Confidence 577788888888877765444 4566655 4567776665554333211 112345666677 99999876653
No 296
>KOG2601|consensus
Probab=80.79 E-value=25 Score=31.62 Aligned_cols=149 Identities=8% Similarity=-0.073 Sum_probs=70.8
Q ss_pred HHHhhhhhhcCchhhHHHHHhhhcC-ChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHH------H
Q psy8365 42 LGFGSYFCYDNPSSLEEHFTTDMHL-TNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIG------Q 114 (381)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~------~ 114 (381)
+++..-...-.+.........+++- |-...+.-...-.....+..++.|...|+ ..|+|++.....+.-++ .
T Consensus 35 gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg-~sr~Kvi~~~L~lqNlSv~vaggl 113 (503)
T KOG2601|consen 35 GYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDG-MSRVKVIQTWLLLQNLSVIVAGGL 113 (503)
T ss_pred HHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcc-hhHHHHHHHHHhhccHHHHHHHHH
Confidence 3343333333444433444444442 22222222233334556777888999999 99999877665543222 1
Q ss_pred HHHHhhh---ccchhHHHHHHHHHHh----ccchhhhhhhhhhhhhcc----cCCcchHHH---HHHHHHHhHhhHhhhh
Q psy8365 115 LVFALGA---YVDSLFITILGRFIFG----IGGESLAVAQNSYAVLWF----KGKELNMVF---GFQLSLSRVGSTVNMF 180 (381)
Q Consensus 115 ~~~~~~~---~~~~~~~l~~~r~l~G----~~~~~~~~~~~~~i~~~~----~~~~r~~~~---~~~~~~~~~g~~~g~~ 180 (381)
++..+.. .+.++..+....++.- ++.-........+-.||. ..+.+.... +..-..-.--..+.|.
T Consensus 114 vi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv 193 (503)
T KOG2601|consen 114 VITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPV 193 (503)
T ss_pred HhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhh
Confidence 1111110 0124444444443332 221111111222233665 334444444 4444444455677888
Q ss_pred hhHHHHhhhhc
Q psy8365 181 VAEPLYKYVEK 191 (381)
Q Consensus 181 ~~~~l~~~~~~ 191 (381)
+.+.+..+.+.
T Consensus 194 ~tg~Iitfvsl 204 (503)
T KOG2601|consen 194 ITGLIITFVSL 204 (503)
T ss_pred hhcccceeech
Confidence 88888776643
No 297
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=78.02 E-value=9.6 Score=26.90 Aligned_cols=35 Identities=20% Similarity=0.112 Sum_probs=23.6
Q ss_pred HHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHH
Q psy8365 75 YSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVL 109 (381)
Q Consensus 75 ~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~ 109 (381)
.+.-+++..+.....||+.||++|.++..++..++
T Consensus 48 lssefIsGilVGa~iG~llD~~agTsPwglIv~ll 82 (116)
T COG5336 48 LSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLL 82 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 44555666677778899999966777655544433
No 298
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=77.50 E-value=64 Score=30.31 Aligned_cols=41 Identities=15% Similarity=0.375 Sum_probs=28.1
Q ss_pred HHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHH
Q psy8365 72 MNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIG 113 (381)
Q Consensus 72 g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~ 113 (381)
|.......+...+.+++.+++.+| +|-+....+.-++..+.
T Consensus 306 g~~~~~~gi~tl~~~l~~~~l~~~-~Gw~~~a~i~Pii~lit 346 (472)
T TIGR00769 306 GDFSTWTGVVSVTMMLLSGNVIRK-YGWLTAALITPLVMLLT 346 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHH
Confidence 444445555556667777999999 99887776665555443
No 299
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=75.08 E-value=45 Score=31.45 Aligned_cols=43 Identities=28% Similarity=0.525 Sum_probs=30.0
Q ss_pred HHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHH
Q psy8365 72 MNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQL 115 (381)
Q Consensus 72 g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~ 115 (381)
|-..+...+...+..++++.+.+| +|-+....+.-++..+..+
T Consensus 322 G~~~~~tGivtii~~~l~~~iir~-~GW~~~AlitPiv~lit~~ 364 (491)
T PF03219_consen 322 GKFSSWTGIVTIIMMFLSSNIIRR-FGWRTAALITPIVILITGL 364 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHhHHHHHHHHH
Confidence 445555666667777888999999 9988877776555544443
No 300
>KOG1278|consensus
Probab=74.31 E-value=14 Score=34.56 Aligned_cols=32 Identities=16% Similarity=0.235 Sum_probs=22.6
Q ss_pred CCChhhhhhhHHHHHHHHhhhhhhHHHHHHhh
Q psy8365 285 NLDSDAANRLNSIVYTISAFLSPLMGLVVDKT 316 (381)
Q Consensus 285 g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~ 316 (381)
-++++.-|-+++...+.-++.+.++|+.+.|+
T Consensus 355 flSPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 355 FLSPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred cCCccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 35777777777776666677777777777765
No 301
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=72.24 E-value=79 Score=28.91 Aligned_cols=29 Identities=7% Similarity=-0.039 Sum_probs=16.5
Q ss_pred hhhhhhhhhhhhhcccCCc--chHHHHHHHH
Q psy8365 141 ESLAVAQNSYAVLWFKGKE--LNMVFGFQLS 169 (381)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~ 169 (381)
+..+.+..++.++.+|+.+ |+..++....
T Consensus 176 g~~~~avaalf~qL~~~a~~t~g~~f~llG~ 206 (536)
T COG3559 176 GMVFTAVAALFAQLSPSARFTRGVAFALLGT 206 (536)
T ss_pred HHHHHHHHHHHHHhCccccccchhHHHHHHH
Confidence 4455666677778887554 4444444333
No 302
>PRK03612 spermidine synthase; Provisional
Probab=71.81 E-value=50 Score=31.47 Aligned_cols=55 Identities=5% Similarity=-0.057 Sum_probs=37.3
Q ss_pred HHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHh
Q psy8365 261 IIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDK 315 (381)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr 315 (381)
..++..++...+.......+...+|.+....+.+.+.+..+..+|+.+++++.++
T Consensus 22 ~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~ 76 (521)
T PRK03612 22 AVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD 76 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 3334444444444444555666678888888888888888888888887777644
No 303
>KOG3810|consensus
Probab=70.94 E-value=13 Score=33.08 Aligned_cols=98 Identities=12% Similarity=0.118 Sum_probs=67.7
Q ss_pred HHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhccchhhhhhhhhhh
Q psy8365 72 MNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIGGESLAVAQNSYA 151 (381)
Q Consensus 72 g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 151 (381)
|..-++..+..+++.+..|.+--+ +.|..-+.++..-...+..++ ....++++|..+++.++...-.....+.+..-+
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~-w~r~g~~ll~~~s~~~agllf-~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNIN-WNRWGDLLLAVGSAVQAGLLF-IMAQTQHIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeec-cchhhHHHHHHHHHHhhhhhh-hhhcccceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 555566667778889999999887 776643333333222233323 223478899999888888777777788888888
Q ss_pred hhcccCCcchHHHHHHHHHH
Q psy8365 152 VLWFKGKELNMVFGFQLSLS 171 (381)
Q Consensus 152 ~~~~~~~~r~~~~~~~~~~~ 171 (381)
++...++.-|..+|+.....
T Consensus 352 A~nL~~e~~gLvFGiNTFvA 371 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTFVA 371 (433)
T ss_pred HHhhhhhhheeeeehHHHHH
Confidence 88888788888888765443
No 304
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=68.79 E-value=55 Score=30.27 Aligned_cols=121 Identities=12% Similarity=-0.028 Sum_probs=68.8
Q ss_pred HHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHH
Q psy8365 38 LMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVF 117 (381)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~ 117 (381)
++.+-.....+......| ..+.+++|++++|...+.+.-.+...++.++--....+ .|-|-....+.-...++.+..
T Consensus 20 ~lglQH~lamfg~~V~VP--livg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~-~g~~lP~~lG~sFafi~p~i~ 96 (451)
T COG2233 20 LLGLQHLLAMFGATVLVP--LLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGP-GGSGLPSYLGSSFAFVAPMIA 96 (451)
T ss_pred HHHHHHHHHHHhcchHhh--HHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccC-cccCCCeeEechHHHHHHHHH
Confidence 334434444444444444 24567899999999999999999999888877664445 666666666655555555444
Q ss_pred HhhhccchhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcch
Q psy8365 118 ALGAYVDSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELN 161 (381)
Q Consensus 118 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 161 (381)
.....-......+.+-+..|+..-...+.....+.+.+||---|
T Consensus 97 ~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG 140 (451)
T COG2233 97 IGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTG 140 (451)
T ss_pred HHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Confidence 33211123455555555555543332222222556666665443
No 305
>KOG4830|consensus
Probab=64.76 E-value=8.1 Score=32.59 Aligned_cols=66 Identities=17% Similarity=0.243 Sum_probs=46.8
Q ss_pred HHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHH---------HHhhcchHHHHH
Q psy8365 258 VVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLV---------VDKTGRNLFWVF 324 (381)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l---------~dr~g~r~~~~~ 324 (381)
..+..+..-..-....+|+-.|+++ .|.++...+.++....+...+..++.|.+ .||+|||+.+-.
T Consensus 22 yGvGHmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~wh~ 96 (412)
T KOG4830|consen 22 YGVGHMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSWHL 96 (412)
T ss_pred echhHHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeeeee
Confidence 4455555555555566777777766 68888888888888888888888877643 588898875443
No 306
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=61.47 E-value=24 Score=23.41 Aligned_cols=21 Identities=5% Similarity=0.154 Sum_probs=9.9
Q ss_pred HHHHHHhHhhHhhhhhhHHHHh
Q psy8365 166 FQLSLSRVGSTVNMFVAEPLYK 187 (381)
Q Consensus 166 ~~~~~~~~g~~~g~~~~~~l~~ 187 (381)
+.+....++.+++-++| ++.+
T Consensus 12 l~~~il~~~~iisfi~G-y~~q 32 (76)
T PF06645_consen 12 LMQYILIISAIISFIVG-YITQ 32 (76)
T ss_pred HHHHHHHHHHHHHHHHH-HHHH
Confidence 34444455555554443 4444
No 307
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.35 E-value=41 Score=23.90 Aligned_cols=20 Identities=15% Similarity=0.328 Sum_probs=14.3
Q ss_pred HHHHhhhhhhHHHHHHhhcc
Q psy8365 299 YTISAFLSPLMGLVVDKTGR 318 (381)
Q Consensus 299 ~~~~~i~~~~~g~l~dr~g~ 318 (381)
.+.+++.....||+.||+-.
T Consensus 52 fIsGilVGa~iG~llD~~ag 71 (116)
T COG5336 52 FISGILVGAGIGWLLDKFAG 71 (116)
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 45556666778899999854
No 308
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=58.56 E-value=17 Score=25.69 Aligned_cols=50 Identities=16% Similarity=0.278 Sum_probs=41.0
Q ss_pred hHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHH
Q psy8365 68 NAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFA 118 (381)
Q Consensus 68 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~ 118 (381)
++..|-..++|.-.+++.++.+++..|+ .-+.+-=.++..+..+|..+..
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg-~~Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDG-VRPDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcC-cCCChHHHHhHHHHHHhHHheE
Confidence 4667888999999999999999999999 8888777777777777765443
No 309
>KOG3097|consensus
Probab=57.37 E-value=35 Score=30.12 Aligned_cols=64 Identities=13% Similarity=0.124 Sum_probs=37.2
Q ss_pred CcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHH
Q psy8365 252 PVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFW 322 (381)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~ 322 (381)
.|+++......+..+..+.+..+.-.. ... ++.....+ .....-+...++.+.+++++|-|..+
T Consensus 28 ~knv~i~s~~fl~~f~a~~gl~nlq~~-vn~--~lg~~sl~----~~y~~l~~s~m~~~~~Ir~~g~K~tm 91 (390)
T KOG3097|consen 28 LKNVLILSIAFLLTFTAYLGLQNLQTS-VNY--DLGTVSLG----ALYLSLIDSSMFMPLLIRFLGTKWTM 91 (390)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHH-Hhc--Ccccchhh----hhhHHHHHHHHHHHHHHHHHhhHHHH
Confidence 477888888888777776665544221 211 22222222 22333445566666889999988774
No 310
>PRK02237 hypothetical protein; Provisional
Probab=54.94 E-value=31 Score=24.51 Aligned_cols=48 Identities=17% Similarity=0.187 Sum_probs=39.5
Q ss_pred HHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHH
Q psy8365 69 AQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVF 117 (381)
Q Consensus 69 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~ 117 (381)
+..|-..++|.-.+++.++.+++..|+ .-+-+-=.++..+..+|..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg-~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDG-VRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcC-cCCChhHHHhHHHHHHhHHHh
Confidence 458889999999999999999999999 887777777777777776544
No 311
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=54.76 E-value=47 Score=20.21 Aligned_cols=34 Identities=21% Similarity=0.378 Sum_probs=21.6
Q ss_pred HhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHH
Q psy8365 77 WYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLV 110 (381)
Q Consensus 77 ~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~ 110 (381)
.......+.....|+..|+.++.++...+..++.
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~ll 41 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLL 41 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 3444556667778888888688866555444433
No 312
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=53.15 E-value=45 Score=25.62 Aligned_cols=21 Identities=10% Similarity=0.118 Sum_probs=13.2
Q ss_pred cchhhhhhhcccCCccccccc
Q psy8365 360 SGLWPLIALVIPEYQLGTAYG 380 (381)
Q Consensus 360 ~~~~~~~~~~~p~~~~g~~~g 380 (381)
.+.|...+...+++..|+..|
T Consensus 113 GisYGilSaSWD~~r~GSllG 133 (153)
T PF11947_consen 113 GISYGILSASWDPEREGSLLG 133 (153)
T ss_pred hhhhhhcccccCCCCCCCccc
Confidence 344666666676766676655
No 313
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=51.44 E-value=56 Score=23.04 Aligned_cols=31 Identities=16% Similarity=0.161 Sum_probs=18.1
Q ss_pred hhhhHHhhhhhhhhhhhcCchhhhHHHHHHH
Q psy8365 80 WPNVICCFIGGFLIDRVFGIRMGSTIYSVLV 110 (381)
Q Consensus 80 ~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~ 110 (381)
+...+...+.|...|+.++-++.+.+..++.
T Consensus 53 v~pil~G~~lG~WLD~~~~t~~~~tl~~lll 83 (100)
T TIGR02230 53 AIPTLLGVAVGIWLDRHYPSPFSWTLTMLIV 83 (100)
T ss_pred HHHHHHHHHHHHHHHhhcCCCcHHHHHHHHH
Confidence 3344556667777787577666554444333
No 314
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=50.12 E-value=2.3e+02 Score=26.90 Aligned_cols=61 Identities=13% Similarity=0.035 Sum_probs=47.1
Q ss_pred HHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 129 TILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 129 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
+++...+..+..-..+++..+.-+++.+|.-=|..|.+.++..++|+.--..+.-.+.+++
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 4455566677777778889999999999999999999999999998866554544555544
No 315
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=49.15 E-value=85 Score=24.15 Aligned_cols=51 Identities=10% Similarity=0.110 Sum_probs=32.1
Q ss_pred chhHHHHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHh
Q psy8365 124 DSLFITILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTV 177 (381)
Q Consensus 124 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 177 (381)
+++..++..-.+.|+|. ....+.+++.--++++-|...|+-..-.+++.+.
T Consensus 95 P~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 45555555555555542 2334455555556687899999888888876654
No 316
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=48.57 E-value=48 Score=27.37 Aligned_cols=49 Identities=12% Similarity=0.215 Sum_probs=33.9
Q ss_pred HHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhh
Q psy8365 131 LGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMF 180 (381)
Q Consensus 131 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 180 (381)
..-.-.|+|.+....++..-+.+.+| +......++....+.+..+.|-.
T Consensus 176 ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y 224 (241)
T PF11299_consen 176 ALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLY 224 (241)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHH
Confidence 34455699989889888888888887 55566666666666555555443
No 317
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=46.84 E-value=1.5e+02 Score=23.86 Aligned_cols=32 Identities=16% Similarity=-0.137 Sum_probs=21.7
Q ss_pred CChhhhhhhHHHHHHHHhhhhhhHHHHHHhhc
Q psy8365 286 LDSDAANRLNSIVYTISAFLSPLMGLVVDKTG 317 (381)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g 317 (381)
-|+.+....+....++....-...+...++.+
T Consensus 147 ~s~~~G~l~m~~FgLGT~p~ll~~~~~~~~l~ 178 (199)
T PF13386_consen 147 GSPLYGALLMLAFGLGTLPALLLAGLLAGKLS 178 (199)
T ss_pred CChHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 46666777777777777666666666666654
No 318
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=45.86 E-value=1.7e+02 Score=26.23 Aligned_cols=28 Identities=7% Similarity=-0.173 Sum_probs=19.1
Q ss_pred hhcCchhhHHHHHhhhcCChHHHHHHHH
Q psy8365 49 CYDNPSSLEEHFTTDMHLTNAQYMNLYS 76 (381)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~s~~~~g~~~s 76 (381)
.............+++|.++.-.|.+..
T Consensus 236 lae~lv~~le~~l~~~g~~~~F~G~iIa 263 (368)
T COG0387 236 LAEILVGSLEAVLESLGAPPAFVGLIIA 263 (368)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 3334444557788899999988877644
No 319
>KOG1237|consensus
Probab=44.46 E-value=1.6e+02 Score=28.53 Aligned_cols=76 Identities=14% Similarity=0.078 Sum_probs=52.3
Q ss_pred HHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHHHHHHHHHHH
Q psy8365 258 VVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVFISLMVSIVC 333 (381)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 333 (381)
....-.+...++++....+..|+.+.++.+...+.-.............+.+++++|-+--|-..+..+..+...+
T Consensus 42 il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G 117 (571)
T KOG1237|consen 42 ILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLG 117 (571)
T ss_pred HHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3444445556777777788889999999888777777777777778888899999998744443344443333333
No 320
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=44.10 E-value=83 Score=23.70 Aligned_cols=27 Identities=11% Similarity=-0.143 Sum_probs=20.0
Q ss_pred hhhhcccCCcchHHHHHHHHHHhHhhH
Q psy8365 150 YAVLWFKGKELNMVFGFQLSLSRVGST 176 (381)
Q Consensus 150 ~i~~~~~~~~r~~~~~~~~~~~~~g~~ 176 (381)
-+.|++|++.|....+..+.......-
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~k~ 85 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAVKS 85 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 357999999999988877766554433
No 321
>KOG1277|consensus
Probab=43.92 E-value=2.7e+02 Score=25.89 Aligned_cols=23 Identities=13% Similarity=0.021 Sum_probs=11.8
Q ss_pred HHHHHhhhhhhHHHHHHhhcchH
Q psy8365 298 VYTISAFLSPLMGLVVDKTGRNL 320 (381)
Q Consensus 298 ~~~~~~i~~~~~g~l~dr~g~r~ 320 (381)
.++.+.+.+..+|-+-.|.|.|+
T Consensus 336 YAlTs~i~GY~~gs~Y~r~gG~~ 358 (593)
T KOG1277|consen 336 YALTSPINGYVSGSFYARLGGRR 358 (593)
T ss_pred HHhcccccccccceeeehhccHH
Confidence 34444445555555556665443
No 322
>COG2119 Predicted membrane protein [Function unknown]
Probab=41.92 E-value=1.6e+02 Score=23.48 Aligned_cols=36 Identities=19% Similarity=0.317 Sum_probs=27.3
Q ss_pred hhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHH
Q psy8365 79 SWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQL 115 (381)
Q Consensus 79 ~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~ 115 (381)
.+...++-..+.++++| +..|++-.++.+++.+..+
T Consensus 144 ~l~s~laVl~G~~ia~k-i~~r~l~~~aallFl~fal 179 (190)
T COG2119 144 ILASVLAVLLGKLIAGK-LPERLLRFIAALLFLIFAL 179 (190)
T ss_pred HHHHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHHH
Confidence 45556777778889999 9999988888777655544
No 323
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=41.73 E-value=2.3e+02 Score=24.52 Aligned_cols=58 Identities=14% Similarity=0.013 Sum_probs=32.4
Q ss_pred HHHHHHHHhccchhhhhhhhhhhhhcccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhh
Q psy8365 129 TILGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKY 188 (381)
Q Consensus 129 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (381)
--..|.+.|+- -..+.+.+++++-.||.+++--..--...+.+++.++-+++| .+.+.
T Consensus 22 ~~~lr~~~g~~-~vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g-~~l~~ 79 (287)
T PF07760_consen 22 IPPLRVILGFP-FVLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIG-LLLNY 79 (287)
T ss_pred hhHHHHHHHHH-HHHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHH-HHHHh
Confidence 45678888876 355577889999999855432222222233334444444443 44443
No 324
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=41.56 E-value=2.7e+02 Score=25.18 Aligned_cols=27 Identities=22% Similarity=-0.020 Sum_probs=20.5
Q ss_pred hcCchhhHHHHHhhhcCChHHHHHHHH
Q psy8365 50 YDNPSSLEEHFTTDMHLTNAQYMNLYS 76 (381)
Q Consensus 50 ~~~~~~~~~~~~~~~~~s~~~~g~~~s 76 (381)
........+...+++|+++.-.|.+..
T Consensus 238 Ae~lv~sIe~~v~~~Glp~afiGvIIa 264 (366)
T PRK10599 238 TKMNASPLETLLTSMNAPVAFTGFLVA 264 (366)
T ss_pred HHHhHhhHHHHHHhcCCCHHHHHHHHH
Confidence 344555567888899999999998763
No 325
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=37.81 E-value=1.1e+02 Score=24.39 Aligned_cols=23 Identities=22% Similarity=0.351 Sum_probs=19.0
Q ss_pred HHhhhhhhHHhhhhhhhhhhhcCc
Q psy8365 76 SWYSWPNVICCFIGGFLIDRVFGI 99 (381)
Q Consensus 76 s~~~~~~~~~~~~~g~l~dr~~G~ 99 (381)
.-|.+++.+...+.|++.|| ..+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k-~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEK-IRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHh-hhc
Confidence 45667888999999999999 665
No 326
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=37.23 E-value=3.2e+02 Score=24.75 Aligned_cols=88 Identities=7% Similarity=-0.106 Sum_probs=55.4
Q ss_pred cCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhh----HHHHHHHHHHHHHH-Hh-hhccchhHHHHHHHHHHhc
Q psy8365 65 HLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGS----TIYSVLVVIGQLVF-AL-GAYVDSLFITILGRFIFGI 138 (381)
Q Consensus 65 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~----~~~~~~~~~~~~~~-~~-~~~~~~~~~l~~~r~l~G~ 138 (381)
|-+--|.+.+.+.|.....+++...-++.|. --.-+-+ .++.+.-.-..++. .+ ....++-+.+++.-++.|.
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd-~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~ 117 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDD-AALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGV 117 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCc-hHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 4566688899999999999999888877775 2221111 11111111111111 11 1123466788888999999
Q ss_pred cchhhhhhhhhhhhh
Q psy8365 139 GGESLAVAQNSYAVL 153 (381)
Q Consensus 139 ~~~~~~~~~~~~i~~ 153 (381)
-.|...|....++..
T Consensus 118 LVG~EiPL~mrml~~ 132 (508)
T COG4262 118 LVGAEIPLLMRMLQR 132 (508)
T ss_pred HHhcchHHHHHHHHH
Confidence 999999998888876
No 327
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=32.59 E-value=3e+02 Score=23.16 Aligned_cols=17 Identities=12% Similarity=0.129 Sum_probs=7.0
Q ss_pred HHHHHHHHHhHhhHhhh
Q psy8365 163 VFGFQLSLSRVGSTVNM 179 (381)
Q Consensus 163 ~~~~~~~~~~~g~~~g~ 179 (381)
.....-.+.-+|+.+|.
T Consensus 11 ~~~~illg~~iGg~~G~ 27 (248)
T PF11368_consen 11 FLLLILLGGLIGGFIGF 27 (248)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333333444444443
No 328
>KOG4112|consensus
Probab=32.12 E-value=1.3e+02 Score=20.71 Aligned_cols=28 Identities=14% Similarity=0.144 Sum_probs=16.2
Q ss_pred hHHHHHHHHHHhHhhHhhhhhhHHHHhhh
Q psy8365 161 NMVFGFQLSLSRVGSTVNMFVAEPLYKYV 189 (381)
Q Consensus 161 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 189 (381)
.++=-..+....+|.++|-+.|. ..+.+
T Consensus 22 kkaEr~~q~ilti~aiVg~i~Gf-~~Qql 49 (101)
T KOG4112|consen 22 KKAERFQQLILTIGAIVGFIYGF-AQQQL 49 (101)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 34444566667777777665543 33433
No 329
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=31.93 E-value=1e+02 Score=21.92 Aligned_cols=36 Identities=19% Similarity=0.098 Sum_probs=29.2
Q ss_pred hhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHH
Q psy8365 289 DAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVF 324 (381)
Q Consensus 289 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~ 324 (381)
...|-.++..+...++.+++.++..|+....+.=.+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~i 89 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWI 89 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHH
Confidence 567888899988999999999999999876555333
No 330
>KOG1397|consensus
Probab=31.30 E-value=84 Score=28.27 Aligned_cols=47 Identities=9% Similarity=0.037 Sum_probs=23.3
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhcCchhhHHHHHhhhcCChHHHHHH
Q psy8365 28 HNIQRVLALLLMCLLGFGSYFCYDNPSSLEEHFTTDMHLTNAQYMNL 74 (381)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~ 74 (381)
+...+|..+..+...++...+......-......++++++.+-+|++
T Consensus 284 p~is~~ss~~~L~~~T~~vsllaeyLV~~Id~~~ds~~ls~~Figli 330 (441)
T KOG1397|consen 284 PNISRWSSIIWLLIMTLLVSLLAEYLVDTIDDVSDSWGLSVKFIGLI 330 (441)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhheee
Confidence 33444444444444343333333333333456677888877766543
No 331
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=31.09 E-value=2.1e+02 Score=23.71 Aligned_cols=53 Identities=8% Similarity=0.168 Sum_probs=37.9
Q ss_pred HHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHH
Q psy8365 59 HFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQL 115 (381)
Q Consensus 59 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~ 115 (381)
.+.+..+++..++|...+..+.... +....+.+| .+.++...++.+...+|..
T Consensus 121 l~a~~~~~s~~~ig~~~g~if~i~i---l~ss~i~r~-~~~~~p~~LG~~Mi~~Gly 173 (224)
T PF09930_consen 121 LLAPSIGLSGWEIGLVLGLIFFILI---LLSSFIFRR-LKKPYPIILGNFMIFLGLY 173 (224)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHH---HHHHHHHHH-hcCCCchHHHHHHHHHHHH
Confidence 4556778888888887766554433 667778888 8877777888777766654
No 332
>COG0861 TerC Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]
Probab=30.27 E-value=3.4e+02 Score=23.06 Aligned_cols=33 Identities=3% Similarity=-0.271 Sum_probs=23.4
Q ss_pred HHHHHHhccchhhhhhhhhhhhhcccCCcchHHH
Q psy8365 131 LGRFIFGIGGESLAVAQNSYAVLWFKGKELNMVF 164 (381)
Q Consensus 131 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 164 (381)
..-.+..+- |.-.....+++.+.+|+++|-++.
T Consensus 22 tl~~lE~vL-~iDN~iviai~~~~Lp~~qr~ral 54 (254)
T COG0861 22 TLILLEIVL-GIDNAIVIAILASKLPPKQRKKAL 54 (254)
T ss_pred HHHHHHHHH-HhhHHHHHHHHHhhCCHHHHHHHH
Confidence 334444443 677778889999999998777765
No 333
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=29.67 E-value=1.8e+02 Score=22.26 Aligned_cols=25 Identities=20% Similarity=0.215 Sum_probs=20.4
Q ss_pred HHhhhhhhHHhhhhhhhhhhhcCchh
Q psy8365 76 SWYSWPNVICCFIGGFLIDRVFGIRM 101 (381)
Q Consensus 76 s~~~~~~~~~~~~~g~l~dr~~G~r~ 101 (381)
.-|.+++.+...+.|++.|| ..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~-~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAER-LKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHh-ccccc
Confidence 45677888889999999999 87764
No 334
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=29.52 E-value=1.5e+02 Score=22.52 Aligned_cols=25 Identities=0% Similarity=-0.227 Sum_probs=18.9
Q ss_pred hhhhcccCCcchHHHHHHHHHHhHh
Q psy8365 150 YAVLWFKGKELNMVFGFQLSLSRVG 174 (381)
Q Consensus 150 ~i~~~~~~~~r~~~~~~~~~~~~~g 174 (381)
-+.|++|+..|..+.+.++......
T Consensus 57 ALkDm~Pp~~R~~i~~~~s~t~s~~ 81 (145)
T TIGR00986 57 ALKDIVPPTTRGWIYHKYSTTTNFV 81 (145)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 4679999999998887776665543
No 335
>COG4769 Predicted membrane protein [Function unknown]
Probab=28.47 E-value=81 Score=24.47 Aligned_cols=51 Identities=20% Similarity=0.264 Sum_probs=34.7
Q ss_pred hhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHhcc
Q psy8365 79 SWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFALGAYVDSLFITILGRFIFGIG 139 (381)
Q Consensus 79 ~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 139 (381)
.....+.+...-++..+ +|+|..-.++.-. .| ++.+|..++.+.+++.+-.
T Consensus 83 sfaG~i~S~L~m~~l~~-f~~k~~S~lgiS~--mG-------aF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 83 SFAGAILSTLFMYFLYQ-FGPKYLSLLGISV--MG-------AFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHH-cCCceEeeeehhh--HH-------HHHHhHHHHHHHHHHHhcc
Confidence 33445556666778889 9998875554322 22 2368999999999988754
No 336
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=28.02 E-value=4e+02 Score=23.11 Aligned_cols=67 Identities=7% Similarity=-0.064 Sum_probs=31.6
Q ss_pred ccccCcchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHH-hhhhhhHHHHHHhhcchHHHHH
Q psy8365 248 VKHFPVSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTIS-AFLSPLMGLVVDKTGRNLFWVF 324 (381)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~i~~~~~g~l~dr~g~r~~~~~ 324 (381)
..+ +|+.+..................|.+. +-...++++-+-+.-+.+ .+|.+ ++-||+.|-....+
T Consensus 65 ~~~-~p~~~~~~~l~a~li~~nW~lfiWAvn------~g~~leaSLGY~InPL~~VllG~l---flkErls~~Q~iAV 132 (293)
T COG2962 65 LLK-QPKTLLMLALTALLIGLNWWLFIWAVN------NGHVLEASLGYFINPLVNVLLGRL---FLKERLSRLQWIAV 132 (293)
T ss_pred HHh-CcHHHHHHHHHHHHHHHHHHHhheecC------CCchhHHHhHHHHHHHHHHHHHHH---HHHhhccHHHHHHH
Confidence 344 455555555554444444444444332 122234444333433333 44454 66788776555333
No 337
>PRK10263 DNA translocase FtsK; Provisional
Probab=27.13 E-value=7.7e+02 Score=26.85 Aligned_cols=18 Identities=11% Similarity=0.314 Sum_probs=9.6
Q ss_pred HhhHhhhhhhHHHHhhhh
Q psy8365 173 VGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 173 ~g~~~g~~~~~~l~~~~~ 190 (381)
.|+++|..++..+...++
T Consensus 142 gGGIIG~lLs~lL~~LfG 159 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLH 159 (1355)
T ss_pred ccchHHHHHHHHHHHHHh
Confidence 355555555555555443
No 338
>PF06422 PDR_CDR: CDR ABC transporter; InterPro: IPR010929 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). In yeast, the PDR and CDR ABC transporters display extensive sequence homology, and confer resistance to several anti-fungal compounds by actively transporting their substrates out of the cell. These transporters have two homologous halves, each with an N-terminal intracellular hydrophilic region that contains an ATP-binding site, followed by a C-terminal membrane-associated region containing six transmembrane segments []. This entry represents a domain of the PDR/CDR ABC transporter comprising extracellular loop 3, transmembrane segment 6 and a linker region.; GO: 0005524 ATP binding, 0042626 ATPase activity, coupled to transmembrane movement of substances, 0006810 transport, 0016021 integral to membrane
Probab=26.95 E-value=1.8e+02 Score=20.65 Aligned_cols=14 Identities=14% Similarity=0.306 Sum_probs=8.0
Q ss_pred ccchhhHHHHHHHH
Q psy8365 195 IGYQTLGIVLLLAG 208 (381)
Q Consensus 195 ~gWr~~~~~~~~~~ 208 (381)
+-||.+++.+...+
T Consensus 47 h~WRN~GIli~f~i 60 (103)
T PF06422_consen 47 HRWRNFGILIAFWI 60 (103)
T ss_pred chhhhHHHHHHHHH
Confidence 36998655544433
No 339
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=26.56 E-value=4.2e+02 Score=22.80 Aligned_cols=29 Identities=14% Similarity=-0.049 Sum_probs=14.9
Q ss_pred cCCChhhhhhhHHHHHHHHhhhhhhHHHHHHh
Q psy8365 284 FNLDSDAANRLNSIVYTISAFLSPLMGLVVDK 315 (381)
Q Consensus 284 ~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr 315 (381)
.+.|+.++ ..+..++..+++.+...+.++
T Consensus 160 ~~~~~~~~---~lPqaiGm~i~a~i~~~~~~~ 188 (269)
T PF06800_consen 160 FHVSGWSA---FLPQAIGMLIGAFIFNLFSKK 188 (269)
T ss_pred cCCChhHh---HHHHHHHHHHHHHHHhhcccc
Confidence 44555433 224556666666665554433
No 340
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=26.39 E-value=3.8e+02 Score=22.28 Aligned_cols=32 Identities=9% Similarity=-0.193 Sum_probs=23.4
Q ss_pred CChhhhhhhHHHHHHHHhhhhhhHHHHHHhhc
Q psy8365 286 LDSDAANRLNSIVYTISAFLSPLMGLVVDKTG 317 (381)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g 317 (381)
-|+.+-+..+..+.++....-+..|..++++.
T Consensus 161 gS~~~Gal~mlaFGlGTlP~ll~~G~~s~~~s 192 (232)
T COG2836 161 GSAFEGALVMLAFGLGTLPNLLAMGIFSSKLS 192 (232)
T ss_pred CCHHHHHHHHHHHhhcccHHHHHHHHHHHHHH
Confidence 36667777777777777777777788888774
No 341
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=25.69 E-value=5.9e+02 Score=24.23 Aligned_cols=35 Identities=31% Similarity=0.497 Sum_probs=23.2
Q ss_pred hHHhhhhhhhhhhhcCchhhhHHHHHHHHHHHHHHH
Q psy8365 83 VICCFIGGFLIDRVFGIRMGSTIYSVLVVIGQLVFA 118 (381)
Q Consensus 83 ~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~~~~~~ 118 (381)
.+.-.++|.+.+| .|=....++.-++..++.+++.
T Consensus 336 v~~~~~~s~~ir~-~GW~~~AlitPiv~litg~lFF 370 (509)
T COG3202 336 VVFLFPGSNLIRR-VGWFTGALITPLVMLITGVLFF 370 (509)
T ss_pred HHHHhhhHHHHHH-hhHHHHHHHHHHHHHHHHHHHH
Confidence 4456678899999 8877666666555555544443
No 342
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=24.91 E-value=3.8e+02 Score=21.74 Aligned_cols=26 Identities=12% Similarity=0.212 Sum_probs=14.6
Q ss_pred HHHHHHHhHhhHhhhhhhHHHHhhhh
Q psy8365 165 GFQLSLSRVGSTVNMFVAEPLYKYVE 190 (381)
Q Consensus 165 ~~~~~~~~~g~~~g~~~~~~l~~~~~ 190 (381)
.......-++..+|..+++.+.+..+
T Consensus 165 ~~~~~~~i~~f~~Ga~~ga~l~~~~~ 190 (209)
T PF06912_consen 165 ALRYLLIILSFFIGAILGALLYRRLG 190 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444444555666666666666553
No 343
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=24.15 E-value=4.9e+02 Score=22.77 Aligned_cols=53 Identities=9% Similarity=-0.023 Sum_probs=25.6
Q ss_pred HHHHHhhhcCChHHHHHHHHHhhhhhhHHhhhhhhhhhhhcCchhhhHHHHHHHHHH
Q psy8365 57 EEHFTTDMHLTNAQYMNLYSWYSWPNVICCFIGGFLIDRVFGIRMGSTIYSVLVVIG 113 (381)
Q Consensus 57 ~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~~G~r~~~~~~~~~~~~~ 113 (381)
+..+.+..+......++..+.......- .+.... -. ||.||.=+++....++.
T Consensus 48 laLLADa~Hml~D~~al~lal~A~~~a~-r~~~~~--~T-fGy~R~eiLaa~~nav~ 100 (296)
T COG1230 48 LALLADALHMLSDALALLLALIAIKLAR-RPATKR--FT-FGYKRLEILAAFLNALL 100 (296)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhc-CCCCCC--CC-ccHhHHHHHHHHHHHHH
Confidence 3566777776666566555543332211 111111 13 56677656555554433
No 344
>COG5547 Small integral membrane protein [Function unknown]
Probab=23.51 E-value=1.9e+02 Score=17.86 Aligned_cols=34 Identities=6% Similarity=0.274 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHH--HHHHHHHH
Q psy8365 323 VFISLMVSIVCHFMVGHTMIDPHITM--VMMGIAYS 356 (381)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~ 356 (381)
++.+.+...++++++.+..+-....+ ...|+..+
T Consensus 11 IIgglvglliAili~t~GfwKtilviil~~lGv~iG 46 (62)
T COG5547 11 IIGGLVGLLIAILILTFGFWKTILVIILILLGVYIG 46 (62)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555555555544334333333 33444444
No 345
>PRK02237 hypothetical protein; Provisional
Probab=23.48 E-value=2.2e+02 Score=20.44 Aligned_cols=36 Identities=19% Similarity=-0.024 Sum_probs=28.9
Q ss_pred hhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHHHH
Q psy8365 289 DAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFWVF 324 (381)
Q Consensus 289 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~~~ 324 (381)
...|-.++..+...++.+++.++..|+....+.=.+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~i 91 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWI 91 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHH
Confidence 347888999999999999999999999876554333
No 346
>KOG2601|consensus
Probab=23.18 E-value=6e+02 Score=23.44 Aligned_cols=70 Identities=9% Similarity=-0.105 Sum_probs=42.1
Q ss_pred cchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHHHHHHhhhhhhHHHHHHhhcchHHH
Q psy8365 253 VSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIVYTISAFLSPLMGLVVDKTGRNLFW 322 (381)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~ 322 (381)
+....+..+++.....--....-...|+.+-.|-|...++.....-.....+...+.|...|+..|.|.+
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi 96 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVI 96 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHH
Confidence 3334455556655555444444455666665565555555555555566666777778888888876653
No 347
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=21.54 E-value=79 Score=21.78 Aligned_cols=46 Identities=15% Similarity=0.153 Sum_probs=29.2
Q ss_pred cchhhHHHHHHHhhhhhhcchhhHHHHHHHhcCCChhhhhhhHHHH
Q psy8365 253 VSFWMVVVIIVSYYTSIFPFVSLAQELFVKRFNLDSDAANRLNSIV 298 (381)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 298 (381)
+..+.+....+..+.++.....+.|..+.....-+....|+..+..
T Consensus 16 r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g~~ 61 (91)
T PF04341_consen 16 RLAWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLGLG 61 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHHHH
Confidence 4456667777777778777788888877655432234455554443
No 348
>PF06808 DctM: DctM-like transporters; InterPro: IPR010656 This domain represents a conserved region located towards the N terminus of the DctM subunit of the bacterial and archaeal TRAP C4-dicarboxylate transport (Dct) system permease. In general, C4-dicarboxylate transport systems allow C4-dicarboxylates like succinate, fumarate, and malate to be taken up. TRAP C4-dicarboxylate carriers are secondary carriers that use an electrochemical H+ gradient as the driving force for transport. DctM is an integral membrane protein that is one of the constituents of TRAP carriers [, ]. Note that many family members are hypothetical proteins.
Probab=20.93 E-value=6.7e+02 Score=23.18 Aligned_cols=42 Identities=7% Similarity=-0.038 Sum_probs=27.7
Q ss_pred hhhhhhhcccC-CcchHHHHHHHHHHhHhhHhhhhhhHHHHhh
Q psy8365 147 QNSYAVLWFKG-KELNMVFGFQLSLSRVGSTVNMFVAEPLYKY 188 (381)
Q Consensus 147 ~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 188 (381)
....+.+.-+. -+|..+.++...+..+|.++-|.+.-.++..
T Consensus 118 G~i~iP~M~k~GY~~~~A~av~aasgtlG~liPPsi~~ii~~~ 160 (416)
T PF06808_consen 118 GSITIPEMKKAGYPPEFAAAVIAASGTLGQLIPPSIGMIIYGM 160 (416)
T ss_pred HHHHHHHHHHcCCCHHHhHHHHhhccccchhcchHHHHHHHHH
Confidence 33344444332 2577888899999999998877766655544
No 349
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=20.62 E-value=1.2e+02 Score=22.37 Aligned_cols=12 Identities=17% Similarity=0.357 Sum_probs=4.7
Q ss_pred HHHHHHHHHHHH
Q psy8365 206 LAGMTCVLSLLC 217 (381)
Q Consensus 206 ~~~~~~~~~~~~ 217 (381)
+|+++.++++++
T Consensus 71 ~gv~aGvIg~Il 82 (122)
T PF01102_consen 71 FGVMAGVIGIIL 82 (122)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333344444433
No 350
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=20.57 E-value=3.1e+02 Score=23.95 Aligned_cols=8 Identities=13% Similarity=0.634 Sum_probs=3.3
Q ss_pred cchhhHHH
Q psy8365 253 VSFWMVVV 260 (381)
Q Consensus 253 ~~~~~~~~ 260 (381)
++.|...+
T Consensus 50 ~~~W~~G~ 57 (300)
T PF05653_consen 50 RPLWWIGL 57 (300)
T ss_pred hHHHHHHH
Confidence 34444433
No 351
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=20.54 E-value=4.7e+02 Score=25.09 Aligned_cols=42 Identities=14% Similarity=0.184 Sum_probs=29.1
Q ss_pred ccCCcchHHHHHHHHHHhHhhHhhhhhhHHHHhhhhccccccchh
Q psy8365 155 FKGKELNMVFGFQLSLSRVGSTVNMFVAEPLYKYVEKFGLIGYQT 199 (381)
Q Consensus 155 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~gWr~ 199 (381)
..+++||......-....+.+.++..+++.+...++.. .|+.
T Consensus 290 ~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g~---~W~~ 331 (521)
T PF02990_consen 290 LSPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFGGK---KWKK 331 (521)
T ss_pred ccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcCCC---ceee
Confidence 34567777777777777777777777777777776654 4665
Done!