Query psy8368
Match_columns 372
No_of_seqs 298 out of 2783
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 16:51:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8368.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8368hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 9.4E-42 3.2E-46 336.7 32.1 298 7-314 22-420 (457)
2 2if4_A ATFKBP42; FKBP-like, al 100.0 4.9E-42 1.7E-46 325.8 25.3 281 12-313 47-332 (338)
3 1p5q_A FKBP52, FK506-binding p 100.0 6.7E-38 2.3E-42 297.1 35.1 277 5-312 16-297 (336)
4 1kt0_A FKBP51, 51 kDa FK506-bi 99.9 3.7E-24 1.3E-28 210.9 26.6 220 8-264 140-407 (457)
5 3o5e_A Peptidyl-prolyl CIS-tra 99.9 1.6E-24 5.6E-29 179.3 15.5 114 7-122 26-142 (144)
6 3b7x_A FK506-binding protein 6 99.9 9.6E-25 3.3E-29 178.6 11.2 117 5-122 17-133 (134)
7 3o5q_A Peptidyl-prolyl CIS-tra 99.9 4.8E-24 1.6E-28 173.2 14.9 114 7-122 10-126 (128)
8 1r9h_A FKB-6, FK506 binding pr 99.9 1.5E-23 5.2E-28 171.7 14.8 115 6-122 4-121 (135)
9 2vn1_A 70 kDa peptidylprolyl i 99.9 1.8E-23 6.2E-28 170.1 15.1 118 4-122 6-126 (129)
10 2f4e_A ATFKBP42; FKBP-like, al 99.9 4.1E-23 1.4E-27 177.0 15.7 126 12-145 47-175 (180)
11 2awg_A 38 kDa FK-506 binding p 99.9 8.6E-23 2.9E-27 163.4 14.6 112 5-122 4-117 (118)
12 1yat_A FK506 binding protein; 99.9 1.5E-22 5.3E-27 160.8 14.9 108 13-122 5-113 (113)
13 2ppn_A FK506-binding protein 1 99.9 1.3E-22 4.3E-27 159.7 14.2 106 15-122 1-107 (107)
14 2y78_A Peptidyl-prolyl CIS-tra 99.9 2.9E-22 9.9E-27 163.4 15.3 109 11-121 25-133 (133)
15 3kz7_A FK506-binding protein 3 99.9 2.6E-22 8.8E-27 161.0 14.8 107 13-121 3-118 (119)
16 2jwx_A FKBP38NTD, FK506-bindin 99.9 2.4E-22 8.3E-27 167.8 14.8 112 5-122 34-148 (157)
17 2lgo_A FKBP; infectious diseas 99.9 7.5E-22 2.6E-26 160.3 14.2 108 12-121 20-130 (130)
18 4dip_A Peptidyl-prolyl CIS-tra 99.9 1.1E-21 3.9E-26 158.6 15.2 111 10-122 8-122 (125)
19 3rkv_A Putative peptidylprolyl 99.9 5.2E-22 1.8E-26 167.0 13.6 153 150-308 6-161 (162)
20 2d9f_A FK506-binding protein 8 99.9 3.4E-22 1.2E-26 163.6 11.5 112 5-122 8-122 (135)
21 1jvw_A Macrophage infectivity 99.9 7.3E-22 2.5E-26 166.7 12.4 108 11-122 34-142 (167)
22 2lkn_A AH receptor-interacting 99.9 3E-22 1E-26 167.6 9.9 111 11-122 7-157 (165)
23 3uf8_A Ubiquitin-like protein 99.9 2E-21 7E-26 170.3 14.9 110 10-121 100-209 (209)
24 3oe2_A Peptidyl-prolyl CIS-tra 99.9 2.3E-21 7.7E-26 169.8 13.9 105 11-122 114-218 (219)
25 1q1c_A FK506-binding protein 4 99.9 4.4E-21 1.5E-25 175.9 16.5 114 7-122 42-158 (280)
26 1fd9_A Protein (macrophage inf 99.9 4.2E-21 1.4E-25 168.2 14.4 108 11-122 103-210 (213)
27 1u79_A FKBP-type peptidyl-prol 99.8 4E-21 1.4E-25 156.1 10.6 108 12-121 10-128 (129)
28 1q6h_A FKBP-type peptidyl-prol 99.8 1.6E-20 5.5E-25 165.6 14.9 106 12-122 119-224 (224)
29 4gco_A Protein STI-1; structur 99.8 6.3E-20 2.1E-24 148.4 15.1 115 153-289 11-125 (126)
30 2hr2_A Hypothetical protein; a 99.8 4.9E-20 1.7E-24 153.7 12.9 137 152-298 8-155 (159)
31 2pbc_A FK506-binding protein 2 99.8 1.8E-19 6.2E-24 140.3 11.9 95 26-122 3-97 (102)
32 1ihg_A Cyclophilin 40; ppiase 99.8 1.6E-18 5.4E-23 166.0 18.6 171 128-308 199-370 (370)
33 2fbn_A 70 kDa peptidylprolyl i 99.8 3E-18 1E-22 148.6 18.3 167 133-312 22-189 (198)
34 3jxv_A 70 kDa peptidyl-prolyl 99.8 5.5E-19 1.9E-23 168.0 14.0 114 7-122 237-354 (356)
35 1q1c_A FK506-binding protein 4 99.8 8.1E-18 2.8E-22 154.2 14.5 107 8-122 160-273 (280)
36 3jxv_A 70 kDa peptidyl-prolyl 99.8 9.4E-18 3.2E-22 159.5 14.8 115 2-122 115-235 (356)
37 4gcn_A Protein STI-1; structur 99.7 3.8E-17 1.3E-21 132.0 14.4 115 151-288 4-125 (127)
38 3upv_A Heat shock protein STI1 99.7 1.2E-16 4.2E-21 127.8 15.2 117 154-292 3-125 (126)
39 3gyz_A Chaperone protein IPGC; 99.7 6.1E-16 2.1E-20 129.0 14.7 105 153-276 34-138 (151)
40 3sz7_A HSC70 cochaperone (SGT) 99.7 1.2E-15 4.1E-20 128.0 16.5 120 153-294 9-130 (164)
41 2vgx_A Chaperone SYCD; alterna 99.6 8.8E-15 3E-19 121.3 15.6 116 153-290 19-134 (148)
42 2xcb_A PCRH, regulatory protei 99.6 1.3E-14 4.4E-19 118.9 16.1 119 154-294 17-135 (142)
43 3q49_B STIP1 homology and U bo 99.6 7.1E-15 2.4E-19 118.6 14.3 120 155-296 9-133 (137)
44 4ga2_A E3 SUMO-protein ligase 99.6 6.7E-15 2.3E-19 122.2 12.7 115 154-290 30-145 (150)
45 4gyw_A UDP-N-acetylglucosamine 99.6 1.7E-14 6E-19 149.0 18.6 136 153-311 7-142 (723)
46 4ga2_A E3 SUMO-protein ligase 99.6 2.2E-15 7.4E-20 125.2 8.6 128 161-310 3-130 (150)
47 3urz_A Uncharacterized protein 99.6 6.5E-14 2.2E-18 122.5 17.9 132 155-293 4-136 (208)
48 1elw_A TPR1-domain of HOP; HOP 99.6 7.7E-14 2.6E-18 108.4 14.8 115 154-290 3-117 (118)
49 1a17_A Serine/threonine protei 99.5 4.7E-13 1.6E-17 110.9 18.8 118 150-289 8-125 (166)
50 1hxv_A Trigger factor; FKBP fo 99.5 1.2E-14 4.1E-19 114.6 7.7 87 26-122 27-113 (113)
51 2lni_A Stress-induced-phosphop 99.5 1.9E-13 6.3E-18 108.9 13.3 116 154-291 15-130 (133)
52 3vtx_A MAMA; tetratricopeptide 99.5 3E-13 1E-17 114.9 15.3 121 154-296 4-124 (184)
53 2vyi_A SGTA protein; chaperone 99.5 5.5E-13 1.9E-17 105.4 15.6 120 152-293 9-128 (131)
54 1elr_A TPR2A-domain of HOP; HO 99.5 3.9E-13 1.3E-17 106.4 14.5 119 154-295 3-128 (131)
55 1hxi_A PEX5, peroxisome target 99.5 1.4E-13 4.9E-18 109.9 11.0 101 157-276 19-119 (121)
56 4i17_A Hypothetical protein; T 99.5 1E-12 3.4E-17 115.7 17.5 131 156-309 8-146 (228)
57 2dba_A Smooth muscle cell asso 99.5 4.9E-13 1.7E-17 108.6 14.3 117 155-290 28-144 (148)
58 4gyw_A UDP-N-acetylglucosamine 99.5 3.2E-13 1.1E-17 139.6 15.3 121 155-297 43-163 (723)
59 2pl2_A Hypothetical conserved 99.5 4.8E-13 1.6E-17 117.7 13.9 121 155-297 5-136 (217)
60 2xev_A YBGF; tetratricopeptide 99.5 1.1E-12 3.7E-17 104.5 14.7 115 157-290 4-121 (129)
61 2c2l_A CHIP, carboxy terminus 99.5 8.4E-13 2.9E-17 121.1 15.6 102 155-275 4-105 (281)
62 3prb_A FKBP-type peptidyl-prol 99.5 3.8E-13 1.3E-17 118.4 12.3 70 29-101 2-84 (231)
63 2k8i_A SLYD, peptidyl-prolyl C 99.4 8.2E-13 2.8E-17 111.5 12.7 70 29-101 3-72 (171)
64 1zu2_A Mitochondrial import re 99.4 3.8E-13 1.3E-17 111.8 10.1 105 167-293 14-139 (158)
65 3pr9_A FKBP-type peptidyl-prol 99.4 2.8E-13 9.7E-18 112.6 8.9 71 29-102 2-85 (157)
66 2h6f_A Protein farnesyltransfe 99.4 8E-13 2.7E-17 126.8 13.1 120 154-295 96-216 (382)
67 4dt4_A FKBP-type 16 kDa peptid 99.4 3E-13 1E-17 113.6 8.9 72 28-101 24-95 (169)
68 2pl2_A Hypothetical conserved 99.4 3.1E-12 1.1E-16 112.5 15.8 134 155-312 39-183 (217)
69 1na0_A Designed protein CTPR3; 99.4 8.6E-12 2.9E-16 97.5 16.5 114 155-290 9-122 (125)
70 2h6f_A Protein farnesyltransfe 99.4 1.4E-12 4.8E-17 125.1 14.0 115 155-291 131-246 (382)
71 3k9i_A BH0479 protein; putativ 99.4 6.3E-13 2.2E-17 105.0 9.1 95 167-283 2-99 (117)
72 4gco_A Protein STI-1; structur 99.4 2.2E-12 7.6E-17 103.7 11.9 101 204-312 13-113 (126)
73 2kr7_A FKBP-type peptidyl-prol 99.4 1.4E-12 4.9E-17 108.1 10.6 73 28-102 6-78 (151)
74 1wao_1 Serine/threonine protei 99.4 1.2E-12 4.2E-17 129.2 11.8 116 153-290 4-119 (477)
75 4i17_A Hypothetical protein; T 99.4 9.1E-12 3.1E-16 109.5 15.3 118 156-295 43-169 (228)
76 3vtx_A MAMA; tetratricopeptide 99.4 2E-11 6.9E-16 103.5 16.8 130 155-307 39-168 (184)
77 2kck_A TPR repeat; tetratricop 99.4 4.5E-12 1.5E-16 97.4 11.5 101 157-276 8-111 (112)
78 3gyz_A Chaperone protein IPGC; 99.4 1E-12 3.5E-17 109.4 8.1 100 204-311 36-135 (151)
79 2e2e_A Formate-dependent nitri 99.4 2.3E-11 7.9E-16 102.6 16.5 103 155-276 44-149 (177)
80 1ix5_A FKBP; ppiase, isomerase 99.4 9.3E-13 3.2E-17 109.2 7.0 72 29-102 2-86 (151)
81 3urz_A Uncharacterized protein 99.3 1E-11 3.5E-16 108.4 13.7 76 161-255 60-135 (208)
82 1hh8_A P67PHOX, NCF-2, neutrop 99.3 3.7E-11 1.3E-15 104.1 16.7 137 153-312 4-153 (213)
83 3uq3_A Heat shock protein STI1 99.3 2.4E-11 8.2E-16 107.6 14.5 111 155-287 139-255 (258)
84 2kfw_A FKBP-type peptidyl-prol 99.3 3.6E-12 1.2E-16 109.7 8.6 71 29-102 3-73 (196)
85 1w26_A Trigger factor, TF; cha 99.3 1.3E-11 4.4E-16 119.8 13.6 115 26-155 155-270 (432)
86 3qky_A Outer membrane assembly 99.3 2.8E-11 9.7E-16 108.8 14.6 155 155-329 15-180 (261)
87 2yhc_A BAMD, UPF0169 lipoprote 99.3 3.8E-11 1.3E-15 105.9 14.8 155 155-329 4-179 (225)
88 2fo7_A Synthetic consensus TPR 99.3 6.8E-11 2.3E-15 93.3 14.9 119 156-296 2-120 (136)
89 1hh8_A P67PHOX, NCF-2, neutrop 99.3 3.5E-11 1.2E-15 104.3 14.0 103 155-276 37-155 (213)
90 2q7f_A YRRB protein; TPR, prot 99.3 1.1E-10 3.9E-15 102.5 17.3 131 155-308 57-187 (243)
91 1xnf_A Lipoprotein NLPI; TPR, 99.3 1E-10 3.5E-15 104.8 17.2 113 154-288 42-154 (275)
92 3as5_A MAMA; tetratricopeptide 99.3 1.1E-10 3.6E-15 97.7 16.1 120 155-296 42-161 (186)
93 3ieg_A DNAJ homolog subfamily 99.3 1.2E-10 4.1E-15 108.0 18.0 124 154-295 233-356 (359)
94 3qky_A Outer membrane assembly 99.3 1.4E-10 4.6E-15 104.3 17.8 142 155-313 52-228 (261)
95 4abn_A Tetratricopeptide repea 99.3 4.5E-11 1.6E-15 117.8 15.7 122 156-299 171-312 (474)
96 3uq3_A Heat shock protein STI1 99.3 1E-10 3.5E-15 103.5 15.9 144 155-306 79-233 (258)
97 2vsy_A XCC0866; transferase, g 99.3 7.4E-11 2.5E-15 118.5 16.7 133 155-310 23-158 (568)
98 2l6j_A TPR repeat-containing p 99.3 4.3E-12 1.5E-16 98.0 5.4 95 154-267 3-103 (111)
99 3as5_A MAMA; tetratricopeptide 99.3 6.5E-11 2.2E-15 99.0 13.1 133 154-309 7-139 (186)
100 2vgx_A Chaperone SYCD; alterna 99.3 2.1E-11 7.3E-16 100.7 9.9 111 176-309 8-118 (148)
101 4abn_A Tetratricopeptide repea 99.3 8.8E-11 3E-15 115.7 16.0 115 155-292 102-226 (474)
102 1w3b_A UDP-N-acetylglucosamine 99.3 1.4E-10 4.9E-15 110.0 16.7 147 155-309 169-334 (388)
103 1fch_A Peroxisomal targeting s 99.2 7E-11 2.4E-15 110.7 14.0 120 155-296 217-347 (368)
104 1w3b_A UDP-N-acetylglucosamine 99.2 1.7E-10 5.8E-15 109.5 16.5 113 155-289 67-179 (388)
105 2pzi_A Probable serine/threoni 99.2 3.5E-11 1.2E-15 123.9 12.5 132 156-311 434-565 (681)
106 4eqf_A PEX5-related protein; a 99.2 9.5E-11 3.2E-15 110.2 14.1 121 155-295 177-297 (365)
107 3ieg_A DNAJ homolog subfamily 99.2 2.3E-10 7.8E-15 106.1 16.0 110 155-286 3-115 (359)
108 2e2e_A Formate-dependent nitri 99.2 3.5E-11 1.2E-15 101.5 9.3 130 161-313 16-148 (177)
109 2q7f_A YRRB protein; TPR, prot 99.2 1.9E-10 6.5E-15 101.0 14.1 131 155-308 91-221 (243)
110 4gcn_A Protein STI-1; structur 99.2 9.7E-11 3.3E-15 94.0 11.0 89 204-296 8-100 (127)
111 4eqf_A PEX5-related protein; a 99.2 9.7E-11 3.3E-15 110.1 12.8 104 154-276 212-315 (365)
112 2kat_A Uncharacterized protein 99.2 2.2E-10 7.6E-15 89.5 12.8 101 173-293 3-103 (115)
113 2gw1_A Mitochondrial precursor 99.2 2.2E-10 7.5E-15 112.0 15.5 106 151-276 2-107 (514)
114 3u4t_A TPR repeat-containing p 99.2 2.9E-10 9.9E-15 101.9 15.1 103 158-276 40-142 (272)
115 3cgm_A SLYD, peptidyl-prolyl C 99.2 3.2E-11 1.1E-15 100.4 8.0 65 29-101 3-67 (158)
116 3u4t_A TPR repeat-containing p 99.2 1.6E-10 5.4E-15 103.7 13.2 133 156-309 4-137 (272)
117 2vq2_A PILW, putative fimbrial 99.2 4.6E-10 1.6E-14 97.1 15.6 120 157-296 44-164 (225)
118 2pzi_A Probable serine/threoni 99.2 2E-11 6.8E-16 125.7 7.6 114 155-291 467-580 (681)
119 2y4t_A DNAJ homolog subfamily 99.2 5.5E-10 1.9E-14 107.6 16.8 122 155-294 257-378 (450)
120 2ho1_A Type 4 fimbrial biogene 99.2 6.8E-10 2.3E-14 98.4 16.0 135 155-310 71-205 (252)
121 3qou_A Protein YBBN; thioredox 99.2 3.3E-10 1.1E-14 104.0 14.3 122 155-294 117-270 (287)
122 3mkr_A Coatomer subunit epsilo 99.2 4.3E-10 1.5E-14 103.5 15.1 135 155-313 130-268 (291)
123 3cv0_A Peroxisome targeting si 99.2 4.4E-10 1.5E-14 103.0 15.2 121 155-297 172-304 (327)
124 2xcb_A PCRH, regulatory protei 99.2 1.2E-10 4.1E-15 95.0 10.0 96 204-307 18-113 (142)
125 2vq2_A PILW, putative fimbrial 99.2 9E-10 3.1E-14 95.2 16.1 122 154-297 7-131 (225)
126 1qqe_A Vesicular transport pro 99.2 3E-10 1E-14 104.3 13.8 148 154-311 76-230 (292)
127 3hym_B Cell division cycle pro 99.2 8.2E-10 2.8E-14 101.3 16.7 154 156-313 126-303 (330)
128 2fo7_A Synthetic consensus TPR 99.2 7.2E-10 2.5E-14 87.2 13.9 102 155-275 35-136 (136)
129 1hxi_A PEX5, peroxisome target 99.2 5.6E-10 1.9E-14 88.7 13.2 96 206-309 19-114 (121)
130 3upv_A Heat shock protein STI1 99.2 4.3E-10 1.5E-14 89.3 12.4 95 204-306 4-98 (126)
131 2ho1_A Type 4 fimbrial biogene 99.2 3.4E-10 1.2E-14 100.3 13.0 123 153-297 35-159 (252)
132 1t11_A Trigger factor, TF; hel 99.1 6.7E-11 2.3E-15 113.2 8.3 97 28-139 160-256 (392)
133 3edt_B KLC 2, kinesin light ch 99.1 3.5E-10 1.2E-14 101.2 12.6 136 153-298 41-188 (283)
134 2yhc_A BAMD, UPF0169 lipoprote 99.1 1.1E-09 3.8E-14 96.4 15.5 137 155-308 41-212 (225)
135 2r5s_A Uncharacterized protein 99.1 6.2E-10 2.1E-14 94.1 13.2 119 157-293 8-158 (176)
136 3n71_A Histone lysine methyltr 99.1 2.6E-09 8.8E-14 105.4 19.6 148 146-300 300-456 (490)
137 1qqe_A Vesicular transport pro 99.1 3E-10 1E-14 104.4 11.8 146 153-308 35-186 (292)
138 1fch_A Peroxisomal targeting s 99.1 1.1E-09 3.9E-14 102.4 16.0 144 155-306 132-311 (368)
139 2y4t_A DNAJ homolog subfamily 99.1 2.2E-09 7.6E-14 103.4 18.4 105 153-276 24-128 (450)
140 3hym_B Cell division cycle pro 99.1 6.9E-10 2.4E-14 101.8 14.0 121 156-298 91-212 (330)
141 2l6j_A TPR repeat-containing p 99.1 5.9E-10 2E-14 85.8 11.0 68 204-275 4-71 (111)
142 3fp2_A TPR repeat-containing p 99.1 2.9E-10 1E-14 112.0 11.3 108 149-276 19-126 (537)
143 1na3_A Designed protein CTPR2; 99.1 1.1E-09 3.7E-14 81.1 11.7 81 204-291 9-89 (91)
144 4g1t_A Interferon-induced prot 99.1 1.4E-09 4.9E-14 105.6 15.7 128 155-291 51-184 (472)
145 2hr2_A Hypothetical protein; a 99.1 5.1E-10 1.7E-14 93.1 10.4 88 204-298 11-121 (159)
146 3sz7_A HSC70 cochaperone (SGT) 99.1 1E-09 3.5E-14 91.5 12.4 102 204-313 11-112 (164)
147 1xnf_A Lipoprotein NLPI; TPR, 99.1 8.7E-10 3E-14 98.7 12.8 128 165-311 15-142 (275)
148 3mkr_A Coatomer subunit epsilo 99.1 2.4E-09 8.1E-14 98.5 15.6 95 163-276 174-269 (291)
149 3ulq_A Response regulator aspa 99.1 2.3E-09 7.8E-14 101.8 15.9 135 153-298 141-283 (383)
150 2vsy_A XCC0866; transferase, g 99.1 6E-10 2E-14 111.9 12.3 109 168-298 2-110 (568)
151 3u3w_A Transcriptional activat 99.1 8.9E-10 3E-14 101.0 12.4 112 154-273 154-268 (293)
152 3q15_A PSP28, response regulat 99.1 1.7E-09 5.9E-14 102.6 14.7 144 153-308 139-289 (378)
153 3u3w_A Transcriptional activat 99.1 1.2E-09 4E-14 100.2 13.0 143 155-306 115-263 (293)
154 3ro3_A PINS homolog, G-protein 99.1 6.1E-09 2.1E-13 84.6 15.4 136 152-296 6-146 (164)
155 3fp2_A TPR repeat-containing p 99.0 1.9E-09 6.6E-14 106.2 14.3 139 153-298 241-397 (537)
156 2kc7_A BFR218_protein; tetratr 99.0 3.8E-10 1.3E-14 85.5 6.9 65 208-276 4-69 (99)
157 3ma5_A Tetratricopeptide repea 99.0 1.8E-09 6.1E-14 82.6 10.7 69 204-276 7-75 (100)
158 3edt_B KLC 2, kinesin light ch 99.0 2.2E-09 7.6E-14 95.9 12.9 113 153-272 83-199 (283)
159 3ulq_A Response regulator aspa 99.0 2.1E-09 7.2E-14 102.1 13.3 112 153-273 182-295 (383)
160 2qfc_A PLCR protein; TPR, HTH, 99.0 7E-09 2.4E-13 95.0 16.0 140 156-305 116-262 (293)
161 3cv0_A Peroxisome targeting si 99.0 2.3E-09 7.8E-14 98.2 12.8 103 155-276 21-123 (327)
162 3q49_B STIP1 homology and U bo 99.0 4.4E-09 1.5E-13 84.1 12.3 88 204-298 9-96 (137)
163 1na3_A Designed protein CTPR2; 99.0 4.7E-09 1.6E-13 77.5 11.3 84 154-256 8-91 (91)
164 2xpi_A Anaphase-promoting comp 99.0 6.6E-09 2.3E-13 103.9 15.9 119 156-289 476-594 (597)
165 2qfc_A PLCR protein; TPR, HTH, 99.0 5.1E-09 1.7E-13 95.9 13.8 112 154-273 154-268 (293)
166 2kc7_A BFR218_protein; tetratr 99.0 3.6E-09 1.2E-13 80.0 10.6 61 204-276 34-95 (99)
167 3rkv_A Putative peptidylprolyl 99.0 2.3E-09 7.8E-14 89.1 10.3 105 204-312 11-129 (162)
168 3nf1_A KLC 1, kinesin light ch 99.0 4.9E-09 1.7E-13 95.2 12.5 135 154-298 68-214 (311)
169 2ifu_A Gamma-SNAP; membrane fu 98.9 5.2E-09 1.8E-13 96.7 12.4 112 154-276 115-228 (307)
170 1p5q_A FKBP52, FK506-binding p 98.9 4.8E-09 1.6E-13 98.5 12.2 97 155-270 196-293 (336)
171 2ifu_A Gamma-SNAP; membrane fu 98.9 5.7E-09 1.9E-13 96.4 12.5 110 155-274 36-147 (307)
172 3q15_A PSP28, response regulat 98.9 1.3E-08 4.4E-13 96.5 15.2 113 153-274 180-293 (378)
173 1elw_A TPR1-domain of HOP; HOP 98.9 1.4E-08 4.8E-13 78.1 12.7 101 204-312 4-104 (118)
174 2xpi_A Anaphase-promoting comp 98.9 1.5E-08 5.1E-13 101.3 16.1 121 155-297 373-493 (597)
175 2kck_A TPR repeat; tetratricop 98.9 3.5E-09 1.2E-13 80.9 8.9 95 205-307 7-104 (112)
176 3nf1_A KLC 1, kinesin light ch 98.9 6.9E-09 2.4E-13 94.2 12.1 113 153-272 109-225 (311)
177 3ro3_A PINS homolog, G-protein 98.9 1.8E-08 6.1E-13 81.8 13.3 113 154-275 48-162 (164)
178 2gw1_A Mitochondrial precursor 98.9 9.3E-09 3.2E-13 100.4 13.6 115 158-288 375-492 (514)
179 3gw4_A Uncharacterized protein 98.9 1.8E-08 6.2E-13 85.9 13.6 135 154-297 25-165 (203)
180 1pc2_A Mitochondria fission pr 98.9 1.2E-08 4.1E-13 83.8 11.7 83 204-293 32-119 (152)
181 2lni_A Stress-induced-phosphop 98.9 1.6E-08 5.4E-13 79.8 12.1 96 204-307 16-111 (133)
182 1a17_A Serine/threonine protei 98.9 1.4E-08 4.7E-13 83.6 11.9 99 155-272 47-147 (166)
183 4a1s_A PINS, partner of inscut 98.9 1.1E-08 3.8E-13 97.3 13.0 128 153-294 46-181 (411)
184 2fbn_A 70 kDa peptidylprolyl i 98.9 4.2E-09 1.4E-13 90.5 8.8 101 204-312 38-154 (198)
185 3qww_A SET and MYND domain-con 98.9 4.5E-08 1.5E-12 95.0 16.7 122 148-276 291-421 (433)
186 2xev_A YBGF; tetratricopeptide 98.9 1.7E-08 5.8E-13 79.7 11.3 102 206-312 4-108 (129)
187 2dba_A Smooth muscle cell asso 98.9 2.5E-08 8.5E-13 80.3 12.0 101 204-312 28-131 (148)
188 3qwp_A SET and MYND domain-con 98.9 5.6E-08 1.9E-12 94.4 16.5 133 153-292 285-426 (429)
189 3ro2_A PINS homolog, G-protein 98.8 3.3E-08 1.1E-12 90.1 13.9 129 155-294 5-138 (338)
190 1ouv_A Conserved hypothetical 98.8 6.6E-08 2.3E-12 87.0 15.6 108 156-291 39-158 (273)
191 2ond_A Cleavage stimulation fa 98.8 4.5E-08 1.5E-12 90.3 14.6 132 156-309 100-232 (308)
192 3sf4_A G-protein-signaling mod 98.8 2.2E-08 7.6E-13 94.5 12.7 136 154-298 186-326 (406)
193 3sf4_A G-protein-signaling mod 98.8 3.1E-08 1.1E-12 93.5 12.8 129 155-294 9-142 (406)
194 4g1t_A Interferon-induced prot 98.8 4.3E-08 1.5E-12 95.1 13.8 103 155-276 247-368 (472)
195 2vyi_A SGTA protein; chaperone 98.8 6.8E-08 2.3E-12 75.5 12.3 97 204-308 12-108 (131)
196 2if4_A ATFKBP42; FKBP-like, al 98.8 5.4E-09 1.8E-13 98.3 6.5 102 156-276 231-333 (338)
197 2ond_A Cleavage stimulation fa 98.8 1E-07 3.4E-12 87.9 15.0 112 155-288 50-177 (308)
198 1na0_A Designed protein CTPR3; 98.8 7.2E-08 2.5E-12 74.7 12.0 98 204-309 9-106 (125)
199 3gw4_A Uncharacterized protein 98.8 1E-07 3.6E-12 81.0 14.0 114 153-274 64-179 (203)
200 1ouv_A Conserved hypothetical 98.8 3.9E-07 1.3E-11 81.8 18.0 110 154-291 73-194 (273)
201 1wao_1 Serine/threonine protei 98.8 5.4E-09 1.8E-13 103.0 5.8 103 155-276 40-155 (477)
202 3ro2_A PINS homolog, G-protein 98.8 3.9E-08 1.4E-12 89.6 11.0 143 154-306 182-329 (338)
203 2c2l_A CHIP, carboxy terminus 98.7 4.9E-08 1.7E-12 89.1 11.4 89 204-299 4-92 (281)
204 4f3v_A ESX-1 secretion system 98.7 8.6E-08 2.9E-12 87.3 12.6 110 157-285 137-247 (282)
205 1elr_A TPR2A-domain of HOP; HO 98.7 5.3E-08 1.8E-12 76.2 9.9 98 204-309 4-108 (131)
206 4a1s_A PINS, partner of inscut 98.7 4.9E-08 1.7E-12 92.8 11.5 134 154-296 165-320 (411)
207 2v5f_A Prolyl 4-hydroxylase su 98.7 1.2E-07 4.1E-12 73.1 11.1 83 155-249 5-87 (104)
208 1dce_A Protein (RAB geranylger 98.7 2.2E-07 7.6E-12 93.4 15.9 116 155-292 63-191 (567)
209 3rjv_A Putative SEL1 repeat pr 98.7 9E-08 3.1E-12 83.4 11.2 112 153-291 16-137 (212)
210 2v5f_A Prolyl 4-hydroxylase su 98.7 1.3E-07 4.3E-12 72.9 10.8 84 205-291 6-92 (104)
211 1ihg_A Cyclophilin 40; ppiase 98.7 7.6E-08 2.6E-12 91.6 10.8 105 204-312 223-339 (370)
212 3rjv_A Putative SEL1 repeat pr 98.7 2.4E-07 8.4E-12 80.6 12.9 112 154-291 49-174 (212)
213 3bee_A Putative YFRE protein; 98.6 2.7E-07 9.1E-12 69.7 10.9 82 204-289 6-90 (93)
214 3k9i_A BH0479 protein; putativ 98.6 3.5E-08 1.2E-12 77.2 5.7 87 216-310 2-91 (117)
215 1dce_A Protein (RAB geranylger 98.6 8E-07 2.7E-11 89.3 16.2 125 165-311 38-175 (567)
216 1zu2_A Mitochondrial import re 98.6 1.1E-07 3.8E-12 78.8 8.0 91 215-312 13-123 (158)
217 3dra_A Protein farnesyltransfe 98.6 4.7E-07 1.6E-11 83.7 12.6 131 156-308 104-249 (306)
218 3dra_A Protein farnesyltransfe 98.6 1.2E-06 4.1E-11 81.0 15.0 118 154-293 66-194 (306)
219 1hz4_A MALT regulatory protein 98.5 1.6E-06 5.3E-11 81.5 15.6 135 154-297 52-192 (373)
220 3dss_A Geranylgeranyl transfer 98.5 3.9E-06 1.3E-10 78.2 17.9 116 155-292 64-192 (331)
221 2ooe_A Cleavage stimulation fa 98.5 1.7E-06 5.9E-11 85.7 15.4 135 155-311 321-456 (530)
222 3ma5_A Tetratricopeptide repea 98.5 3.5E-07 1.2E-11 69.6 7.7 63 155-232 7-69 (100)
223 2r5s_A Uncharacterized protein 98.5 4.2E-07 1.4E-11 76.4 8.8 111 155-270 40-172 (176)
224 3q7a_A Farnesyltransferase alp 98.4 4E-06 1.4E-10 78.7 15.2 110 165-296 64-176 (349)
225 1nzn_A CGI-135 protein, fissio 98.4 2.8E-06 9.6E-11 67.2 11.9 83 204-293 35-122 (126)
226 3qou_A Protein YBBN; thioredox 98.4 8.2E-07 2.8E-11 81.1 10.3 114 154-271 150-284 (287)
227 1klx_A Cysteine rich protein B 98.4 3.2E-06 1.1E-10 68.4 12.3 89 161-272 31-127 (138)
228 4f3v_A ESX-1 secretion system 98.4 1E-06 3.5E-11 80.2 9.4 134 155-312 102-240 (282)
229 1hz4_A MALT regulatory protein 98.4 4E-06 1.4E-10 78.7 13.5 135 153-297 12-153 (373)
230 3n71_A Histone lysine methyltr 98.4 1.9E-06 6.5E-11 84.9 11.5 117 153-276 349-469 (490)
231 3dss_A Geranylgeranyl transfer 98.4 6.3E-06 2.2E-10 76.8 14.3 120 153-294 24-159 (331)
232 3q7a_A Farnesyltransferase alp 98.4 3.4E-06 1.1E-10 79.2 12.4 117 155-293 88-215 (349)
233 2ooe_A Cleavage stimulation fa 98.3 4.6E-06 1.6E-10 82.6 12.9 103 155-276 272-390 (530)
234 2xm6_A Protein corresponding t 98.3 8.4E-06 2.9E-10 79.9 14.4 78 204-290 363-451 (490)
235 2kat_A Uncharacterized protein 98.3 3.9E-06 1.3E-10 64.9 9.6 78 222-307 3-80 (115)
236 3gty_X Trigger factor, TF; cha 98.2 6.3E-06 2.1E-10 79.8 11.4 101 28-155 154-255 (433)
237 3ffl_A Anaphase-promoting comp 98.2 2.5E-05 8.6E-10 64.5 13.1 124 156-289 21-165 (167)
238 4b4t_Q 26S proteasome regulato 98.2 1.8E-05 6.2E-10 75.5 13.3 124 153-276 53-209 (434)
239 2xm6_A Protein corresponding t 98.1 4.2E-05 1.4E-09 74.9 15.4 107 155-289 75-193 (490)
240 3o48_A Mitochondria fission 1 98.1 3.5E-05 1.2E-09 61.1 10.6 84 204-294 40-127 (134)
241 4b4t_Q 26S proteasome regulato 98.0 6.3E-05 2.1E-09 71.7 14.2 103 155-270 135-237 (434)
242 1y8m_A FIS1; mitochondria, unk 98.0 7.1E-05 2.4E-09 60.1 11.6 83 204-293 39-125 (144)
243 1xi4_A Clathrin heavy chain; a 98.0 5.3E-05 1.8E-09 81.8 13.2 110 156-295 1196-1330(1630)
244 1klx_A Cysteine rich protein B 98.0 5.5E-05 1.9E-09 61.0 10.3 94 168-291 8-105 (138)
245 3e4b_A ALGK; tetratricopeptide 98.0 6.5E-05 2.2E-09 73.0 12.7 122 157-291 178-330 (452)
246 3e4b_A ALGK; tetratricopeptide 97.9 6E-05 2E-09 73.3 12.3 75 204-291 283-366 (452)
247 1pc2_A Mitochondria fission pr 97.8 8.7E-05 3E-09 60.7 9.6 79 155-251 32-114 (152)
248 1xi4_A Clathrin heavy chain; a 97.8 0.00024 8.1E-09 76.9 14.8 99 150-268 1100-1221(1630)
249 3ly7_A Transcriptional activat 97.7 0.00038 1.3E-08 65.4 13.4 117 155-276 196-344 (372)
250 1b89_A Protein (clathrin heavy 97.7 0.00011 3.9E-09 70.7 10.0 80 205-295 178-257 (449)
251 3mv2_B Coatomer subunit epsilo 97.7 0.00014 4.8E-09 66.9 10.1 98 161-276 182-287 (310)
252 3u64_A Protein TP_0956; tetrat 97.7 0.00023 8E-09 64.4 10.8 68 204-275 199-273 (301)
253 3qww_A SET and MYND domain-con 97.7 0.00019 6.4E-09 69.5 10.7 84 153-243 338-422 (433)
254 3qwp_A SET and MYND domain-con 97.6 0.00023 8E-09 68.8 10.3 96 153-255 327-426 (429)
255 3mv2_B Coatomer subunit epsilo 97.5 0.00074 2.5E-08 62.1 11.9 125 156-301 101-233 (310)
256 3bee_A Putative YFRE protein; 97.5 0.0011 3.7E-08 49.5 10.2 67 155-240 6-75 (93)
257 3ffl_A Anaphase-promoting comp 97.4 0.0006 2E-08 56.3 8.1 96 153-253 61-166 (167)
258 2ff4_A Probable regulatory pro 97.2 0.0074 2.5E-07 57.3 15.3 111 156-270 116-233 (388)
259 1b89_A Protein (clathrin heavy 97.1 0.0008 2.7E-08 64.8 7.6 115 156-310 123-237 (449)
260 1nzn_A CGI-135 protein, fissio 96.9 0.006 2.1E-07 48.0 9.0 78 156-250 36-116 (126)
261 3o48_A Mitochondria fission 1 96.5 0.029 9.9E-07 44.4 10.9 79 155-251 40-121 (134)
262 3txn_A 26S proteasome regulato 96.5 0.031 1E-06 53.0 13.0 103 160-271 104-210 (394)
263 1y8m_A FIS1; mitochondria, unk 96.5 0.028 9.6E-07 45.0 10.6 77 155-249 39-118 (144)
264 4e6h_A MRNA 3'-END-processing 96.4 0.1 3.4E-06 53.3 17.2 144 160-311 383-535 (679)
265 3u64_A Protein TP_0956; tetrat 96.3 0.0085 2.9E-07 54.2 7.4 66 219-291 178-251 (301)
266 4e6h_A MRNA 3'-END-processing 96.2 0.022 7.6E-07 58.1 10.9 134 156-307 344-497 (679)
267 4gns_B Protein CSD3, chitin bi 96.0 0.05 1.7E-06 55.9 12.3 60 206-269 339-398 (754)
268 3mkr_B Coatomer subunit alpha; 95.7 0.23 7.8E-06 45.3 13.7 119 157-276 104-232 (320)
269 3mv2_A Coatomer subunit alpha; 95.6 0.27 9.3E-06 44.8 13.8 119 158-276 117-241 (325)
270 3kae_A CDC27, possible protein 95.2 0.32 1.1E-05 40.1 11.6 70 207-276 65-148 (242)
271 4h7y_A Dual specificity protei 95.1 0.52 1.8E-05 38.1 12.6 93 172-276 36-128 (161)
272 4b4t_R RPN7, 26S proteasome re 95.0 0.12 4.2E-06 49.6 10.2 105 157-273 133-239 (429)
273 3txn_A 26S proteasome regulato 94.4 3.4 0.00012 39.0 18.6 154 152-305 16-207 (394)
274 1ya0_A SMG-7 transcript varian 93.7 0.41 1.4E-05 46.7 11.0 81 204-291 152-232 (497)
275 3ly7_A Transcriptional activat 93.6 0.34 1.2E-05 45.3 9.7 70 159-249 281-350 (372)
276 1zbp_A Hypothetical protein VP 93.2 0.48 1.6E-05 42.1 9.5 61 212-276 5-65 (273)
277 2uy1_A Cleavage stimulation fa 93.2 1.7 5.7E-05 42.3 14.5 124 156-288 214-363 (493)
278 4g26_A Pentatricopeptide repea 92.2 2.3 7.9E-05 41.4 14.1 104 156-276 106-211 (501)
279 4gns_B Protein CSD3, chitin bi 91.4 0.5 1.7E-05 48.5 8.4 59 157-230 339-397 (754)
280 2uy1_A Cleavage stimulation fa 90.8 2.2 7.4E-05 41.5 12.2 113 173-310 197-350 (493)
281 2w2u_A Hypothetical P60 katani 90.2 0.36 1.2E-05 34.8 4.5 37 151-187 15-51 (83)
282 3mkq_A Coatomer beta'-subunit; 88.9 2.7 9.1E-05 42.8 11.6 26 156-181 682-707 (814)
283 1zbp_A Hypothetical protein VP 88.8 5.3 0.00018 35.4 11.7 63 162-243 4-66 (273)
284 4b4t_P 26S proteasome regulato 88.4 6.2 0.00021 37.7 13.1 110 153-271 135-247 (445)
285 1wfd_A Hypothetical protein 15 87.9 3.7 0.00013 30.0 8.7 38 151-188 11-48 (93)
286 4a5x_A MITD1, MIT domain-conta 87.6 3.5 0.00012 29.7 8.3 35 153-187 14-48 (86)
287 2cpt_A SKD1 protein, vacuolar 87.5 3.6 0.00012 31.6 8.7 38 151-188 14-51 (117)
288 2dl1_A Spartin; SPG20, MIT, st 86.8 6.3 0.00021 30.0 9.4 77 147-223 14-97 (116)
289 2v6y_A AAA family ATPase, P60 86.3 3.2 0.00011 29.7 7.3 37 151-187 7-43 (83)
290 4g26_A Pentatricopeptide repea 85.3 9.3 0.00032 37.1 12.6 70 204-276 105-176 (501)
291 4fhn_B Nucleoporin NUP120; pro 84.1 3.1 0.00011 45.0 9.3 109 159-268 846-964 (1139)
292 2v6x_A Vacuolar protein sortin 83.4 5.4 0.00019 28.5 7.6 37 151-187 9-45 (85)
293 3mkq_B Coatomer subunit alpha; 82.5 6.8 0.00023 32.4 8.7 83 154-268 33-115 (177)
294 1ya0_A SMG-7 transcript varian 82.4 6.8 0.00023 38.1 10.1 82 154-254 151-232 (497)
295 4b4t_S RPN3, 26S proteasome re 81.6 3.4 0.00012 40.3 7.5 72 204-276 231-304 (523)
296 2crb_A Nuclear receptor bindin 79.9 12 0.0004 27.2 7.9 38 152-189 12-49 (97)
297 3spa_A Mtrpol, DNA-directed RN 78.1 34 0.0012 36.4 14.0 108 154-275 126-236 (1134)
298 3mkq_A Coatomer beta'-subunit; 76.3 6.1 0.00021 40.1 8.0 62 205-266 682-747 (814)
299 2wb7_A PT26-6P; extra chromoso 74.5 21 0.00072 34.2 10.4 19 171-189 448-466 (526)
300 2dl1_A Spartin; SPG20, MIT, st 74.4 15 0.00051 27.9 7.6 72 218-304 17-92 (116)
301 4b4t_R RPN7, 26S proteasome re 74.0 7.9 0.00027 36.7 7.6 66 206-272 133-198 (429)
302 3t5v_B Nuclear mRNA export pro 71.5 7.3 0.00025 37.4 6.7 107 168-275 139-254 (455)
303 1qsa_A Protein (soluble lytic 69.2 18 0.0006 36.2 9.1 53 214-270 295-347 (618)
304 2ff4_A Probable regulatory pro 69.1 19 0.00064 33.6 8.9 62 156-232 172-233 (388)
305 2crb_A Nuclear receptor bindin 68.8 31 0.001 25.1 8.9 26 244-269 17-42 (97)
306 1wy6_A Hypothetical protein ST 67.9 26 0.00089 27.8 7.8 35 237-271 120-154 (172)
307 4gq2_M Nucleoporin NUP120; bet 67.7 22 0.00076 37.4 10.0 95 159-256 844-950 (950)
308 3eab_A Spastin; spastin, MIT, 67.5 23 0.00078 25.6 6.9 69 149-217 10-85 (89)
309 3mkq_B Coatomer subunit alpha; 64.8 14 0.00049 30.4 6.2 46 215-269 16-61 (177)
310 4b4t_P 26S proteasome regulato 62.3 76 0.0026 30.0 11.9 67 203-269 136-204 (445)
311 2w2u_A Hypothetical P60 katani 60.7 31 0.001 24.5 6.6 23 209-231 24-46 (83)
312 2v6y_A AAA family ATPase, P60 58.1 29 0.001 24.5 6.2 15 262-276 38-52 (83)
313 2yin_A DOCK2, dedicator of cyt 58.1 25 0.00086 33.4 7.6 97 156-256 36-140 (436)
314 3qnk_A Putative lipoprotein; a 57.3 1.2E+02 0.004 29.3 12.5 52 220-271 153-211 (517)
315 2wpv_A GET4, UPF0363 protein Y 56.5 1.1E+02 0.0038 27.4 12.6 112 152-266 30-158 (312)
316 3ax2_A Mitochondrial import re 55.8 27 0.00093 24.1 5.4 30 247-276 22-51 (73)
317 3lpz_A GET4 (YOR164C homolog); 55.7 1.2E+02 0.0042 27.5 20.6 123 148-270 28-215 (336)
318 2cpt_A SKD1 protein, vacuolar 55.1 61 0.0021 24.6 7.9 16 261-276 44-59 (117)
319 4a5x_A MITD1, MIT domain-conta 54.9 54 0.0019 23.3 8.9 34 237-270 9-44 (86)
320 2xze_A STAM-binding protein; h 52.9 31 0.0011 27.4 6.2 42 144-185 29-70 (146)
321 2vkj_A TM1634; membrane protei 52.9 61 0.0021 23.3 8.4 32 153-184 51-82 (106)
322 2npm_A 14-3-3 domain containin 52.3 50 0.0017 28.9 7.9 54 171-232 172-226 (260)
323 3ax2_A Mitochondrial import re 52.3 31 0.0011 23.9 5.2 32 156-187 18-49 (73)
324 2oo2_A Hypothetical protein AF 51.0 38 0.0013 24.2 5.7 38 148-185 28-65 (86)
325 3htx_A HEN1; HEN1, small RNA m 51.0 19 0.00066 37.3 5.7 58 29-91 561-649 (950)
326 2br9_A 14-3-3E, 14-3-3 protein 50.7 49 0.0017 28.5 7.5 55 171-232 146-201 (234)
327 2pmr_A Uncharacterized protein 50.6 41 0.0014 24.1 5.8 39 147-185 31-69 (87)
328 3kae_A CDC27, possible protein 50.5 1.1E+02 0.0036 25.3 12.4 123 153-275 60-241 (242)
329 2rpa_A Katanin P60 ATPase-cont 49.6 17 0.00057 25.6 3.5 33 155-187 12-44 (78)
330 3r9m_A BRO1 domain-containing 49.5 90 0.0031 28.8 9.8 30 242-271 253-282 (376)
331 2pn0_A Prokaryotic transcripti 48.6 44 0.0015 26.2 6.4 24 71-94 94-117 (141)
332 3t5x_A PCI domain-containing p 46.8 34 0.0011 28.7 5.8 29 204-232 14-42 (203)
333 3uzd_A 14-3-3 protein gamma; s 46.7 61 0.0021 28.1 7.5 55 171-232 147-202 (248)
334 3ubw_A 14-3-3E, 14-3-3 protein 46.5 62 0.0021 28.3 7.5 55 171-232 172-227 (261)
335 1o9d_A 14-3-3-like protein C; 45.9 62 0.0021 28.3 7.5 55 171-232 151-206 (260)
336 4h7y_A Dual specificity protei 45.1 1E+02 0.0035 24.7 7.9 70 167-256 72-141 (161)
337 1zb1_A BRO1 protein; AIP1, BRO 45.0 67 0.0023 29.9 8.1 27 244-270 259-285 (392)
338 2a9u_A Ubiquitin carboxyl-term 43.6 1.2E+02 0.004 23.9 9.0 48 142-189 29-76 (144)
339 1om2_A Protein (mitochondrial 43.4 48 0.0016 24.2 5.3 32 156-187 21-52 (95)
340 2rpa_A Katanin P60 ATPase-cont 42.7 84 0.0029 21.9 7.3 26 245-270 15-40 (78)
341 2p4v_A Transcription elongatio 42.7 50 0.0017 26.5 6.0 25 69-93 119-143 (158)
342 2cfu_A SDSA1; SDS-hydrolase, l 41.6 59 0.002 32.6 7.6 51 242-295 449-499 (658)
343 4b4t_S RPN3, 26S proteasome re 41.5 1.1E+02 0.0038 29.7 9.1 105 154-276 269-378 (523)
344 3i4g_A SUSD-like carbohydrate 39.8 1.8E+02 0.006 28.1 10.6 52 220-271 167-227 (528)
345 3eab_A Spastin; spastin, MIT, 39.7 1E+02 0.0035 22.1 9.4 71 218-303 11-85 (89)
346 3iqu_A 14-3-3 protein sigma; s 39.6 83 0.0028 27.1 7.1 55 171-232 149-204 (236)
347 3bmb_A Regulator of nucleoside 38.9 46 0.0016 25.9 5.1 25 70-94 90-114 (136)
348 2f23_A Anti-cleavage anti-GREA 38.8 32 0.0011 27.6 4.2 24 71-94 122-145 (156)
349 3spa_A Mtrpol, DNA-directed RN 38.5 2.2E+02 0.0077 30.3 11.3 72 204-276 127-201 (1134)
350 1om2_A Protein (mitochondrial 38.2 40 0.0014 24.6 4.2 30 247-276 25-54 (95)
351 2vkj_A TM1634; membrane protei 37.0 1.2E+02 0.0039 21.9 6.9 22 210-231 59-80 (106)
352 3jq1_A SUSD superfamily protei 36.1 1.7E+02 0.0057 27.9 9.6 51 220-270 154-208 (481)
353 3hdx_A SUSD homolog, SUSD supe 36.0 1.9E+02 0.0066 27.3 10.1 52 220-271 156-226 (478)
354 1grj_A GREA protein; transcrip 35.0 35 0.0012 27.4 3.9 25 70-94 122-146 (158)
355 3efz_A 14-3-3 protein; 14-3-3, 34.9 80 0.0027 27.7 6.3 55 171-232 168-225 (268)
356 2ijq_A Hypothetical protein; s 33.2 1.9E+02 0.0064 23.2 8.2 59 209-271 37-104 (161)
357 2ymb_A MITD1, MIT domain-conta 31.6 9.9 0.00034 33.4 0.0 38 151-188 19-56 (257)
358 3lpz_A GET4 (YOR164C homolog); 31.2 3E+02 0.01 24.9 14.1 68 157-233 14-84 (336)
359 2ca5_A MXIH; transport protein 31.0 1.4E+02 0.0048 21.1 5.9 29 256-287 24-52 (85)
360 2cfu_A SDSA1; SDS-hydrolase, l 30.9 60 0.002 32.6 5.6 50 205-258 450-499 (658)
361 4gq2_M Nucleoporin NUP120; bet 30.8 53 0.0018 34.5 5.4 52 211-270 817-868 (950)
362 4b4t_O 26S proteasome regulato 29.9 3.3E+02 0.011 25.0 10.6 68 204-271 127-198 (393)
363 2xs1_A Programmed cell death 6 29.4 1.5E+02 0.0051 29.9 8.3 27 244-270 262-288 (704)
364 2wpv_A GET4, UPF0363 protein Y 28.7 3.2E+02 0.011 24.4 18.3 116 155-270 53-216 (312)
365 2g0u_A Type III secretion syst 27.9 1.7E+02 0.0058 21.1 6.9 35 256-293 30-64 (92)
366 4fhn_B Nucleoporin NUP120; pro 27.8 64 0.0022 34.7 5.5 53 209-269 817-869 (1139)
367 3myv_A SUSD superfamily protei 26.9 1.3E+02 0.0043 28.4 6.9 52 220-271 164-219 (454)
368 3ebb_A Phospholipase A2-activa 26.8 2E+02 0.0067 25.6 7.8 55 198-254 206-260 (304)
369 3t5x_A PCI domain-containing p 26.3 1.7E+02 0.0057 24.3 6.8 32 245-276 17-48 (203)
370 3myv_A SUSD superfamily protei 26.0 1.6E+02 0.0054 27.7 7.5 29 204-232 190-218 (454)
371 3lew_A SUSD-like carbohydrate 25.9 1.6E+02 0.0054 28.1 7.5 29 204-232 203-231 (495)
372 3lew_A SUSD-like carbohydrate 25.6 1.4E+02 0.0047 28.6 7.0 52 220-271 174-232 (495)
373 3kez_A Putative sugar binding 24.7 1.3E+02 0.0044 28.4 6.6 52 220-271 170-225 (461)
374 3otn_A SUSD superfamily protei 24.5 3.1E+02 0.011 25.9 9.3 51 220-270 160-225 (482)
375 3snx_A SUSD homolog, putative 24.5 1.2E+02 0.0042 28.6 6.4 52 220-271 160-220 (460)
376 3umh_A Amyloid beta A4 protein 23.2 3.3E+02 0.011 22.8 8.4 68 204-276 86-155 (211)
377 3kez_A Putative sugar binding 22.7 1.9E+02 0.0065 27.2 7.3 29 204-232 196-224 (461)
378 3mcx_A SUSD superfamily protei 22.5 1.6E+02 0.0055 27.8 6.8 53 220-272 176-232 (477)
379 3snx_A SUSD homolog, putative 22.4 1.9E+02 0.0065 27.3 7.3 29 204-232 191-219 (460)
380 4aez_C MAD3, mitotic spindle c 21.1 3.8E+02 0.013 22.7 9.3 64 207-274 119-182 (223)
381 2lj4_A Peptidyl-prolyl CIS-tra 21.0 36 0.0012 25.6 1.4 22 67-88 79-100 (115)
382 2ijq_A Hypothetical protein; s 20.9 3.2E+02 0.011 21.8 11.7 77 156-239 33-110 (161)
383 3mcx_A SUSD superfamily protei 20.8 1.9E+02 0.0065 27.3 6.9 29 204-232 202-230 (477)
384 2cwy_A Hypothetical protein TT 20.6 2.4E+02 0.0082 20.2 10.3 69 160-239 6-74 (94)
385 2wm9_A Dedicator of cytokinesi 20.5 2.4E+02 0.0082 26.4 7.4 97 155-256 11-135 (428)
386 2jpu_A ORF C02003 protein; sol 20.3 3E+02 0.01 21.1 10.4 34 152-185 4-37 (129)
387 2zan_A Vacuolar protein sortin 20.3 22 0.00074 33.8 0.0 38 151-188 7-44 (444)
No 1
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=100.00 E-value=9.4e-42 Score=336.73 Aligned_cols=298 Identities=23% Similarity=0.383 Sum_probs=225.6
Q ss_pred Ccccc--CCCcEEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCC
Q psy8368 7 GKEQI--QDGKLMKKIKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQK 83 (372)
Q Consensus 7 ~~di~--~d~~i~k~il~~G~g~~-~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~ 83 (372)
|.||+ +++|+.|+|+++|+|.. |..||.|+|||++++.+ |++||||+.++. |++|.+|.+.+++||+.+|.+|++
T Consensus 22 ~~~~~~~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~-g~~~dss~~~~~-p~~~~~g~~~~i~g~~~~l~~m~~ 99 (457)
T 1kt0_A 22 GEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSN-GKKFDSSHDRNE-PFVFSLGKGQVIKAWDIGVATMKR 99 (457)
T ss_dssp -----------CEEEC--------CCCBTCEEEEEEEEEC------CBC-------CEEEETTSTTSCHHHHHHHTTCCT
T ss_pred cccccCCCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECC-CCEEeccCCCCC-CeEEEeCCcchhhHHHHHHhhCCC
Confidence 78999 99999999999999998 99999999999999865 469999987777 999999999999999999999999
Q ss_pred CcEEEEEecCCCccCCCCCCCCCCCCCcEEEEEEEEeeecCcccc-----------------------------------
Q psy8368 84 GEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFSIDPQVV----------------------------------- 128 (372)
Q Consensus 84 Ge~~~~~i~~~~~yg~~g~~~~ip~~~~~~~~iel~~~~~~~~~~----------------------------------- 128 (372)
||++.|.|||.++||..|.|+.||++++++|+|+|+++. .....
T Consensus 100 Ge~~~~~i~~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~-~~~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~~g 178 (457)
T 1kt0_A 100 GEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK-GEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGG 178 (457)
T ss_dssp TCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE-CEETTSSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEETT
T ss_pred CCEEEEEEChHHhccccCCCCCCCCCCcEEEEEeeceee-cccccCCcceEEEEEecCCCCCCCCCCCEEEEEEEEEeCC
Confidence 999999999999999999988999999999999999887 32000
Q ss_pred ccccccccccccC-----------------------------cc-----------------------------C-----c
Q psy8368 129 RSSADIESDFIDS-----------------------------QV-----------------------------E-----E 145 (372)
Q Consensus 129 ~~~~~~~~~~~~~-----------------------------~~-----------------------------e-----~ 145 (372)
..|...+..|.+. +. + .
T Consensus 179 ~~f~~~~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A~~~~~ 258 (457)
T 1kt0_A 179 RMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKAKESWE 258 (457)
T ss_dssp EEEEEEEEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEECCCCGGG
T ss_pred eEEecCceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCCCEEEEEhhhhhcccCcchhh
Confidence 0000000000000 00 0 1
Q ss_pred hhHHHHHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHH
Q psy8368 146 PAFAKVLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCD 225 (372)
Q Consensus 146 ~~~~~~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~ 225 (372)
...+.....+..++..|+.+++.|+|.+|+..|.+|+.+.+.....+++...+...+...+|+|+|.||+++++|++|+.
T Consensus 259 ~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~ 338 (457)
T 1kt0_A 259 MDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVE 338 (457)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 22345567889999999999999999999999999999988876666677778888889999999999999999999999
Q ss_pred HHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy8368 226 CASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMK 305 (372)
Q Consensus 226 ~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 305 (372)
+|+++|+ ++|+++++||++|.+|..+|+|++|+.+|++|++++|++. .++..+..+...++++.++++..|++
T Consensus 339 ~~~~al~----~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~---~a~~~l~~~~~~~~~~~~a~~~~~~~ 411 (457)
T 1kt0_A 339 CCDKALG----LDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK---AARLQISMCQKKAKEHNERDRRIYAN 411 (457)
T ss_dssp HHHHHHH----HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-------CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh----cCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 9999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred hccCCCCCC
Q psy8368 306 MFSSSSSPS 314 (372)
Q Consensus 306 ~~~~~~~~~ 314 (372)
||.+....+
T Consensus 412 ~f~k~~~~d 420 (457)
T 1kt0_A 412 MFKKFAEQD 420 (457)
T ss_dssp C--------
T ss_pred HHhhhhhcc
Confidence 998877653
No 2
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=100.00 E-value=4.9e-42 Score=325.82 Aligned_cols=281 Identities=21% Similarity=0.304 Sum_probs=209.5
Q ss_pred CCCcEEEEEEecCCCCCCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCC-ccchHHHHHhccCCCCcEEEEE
Q psy8368 12 QDGKLMKKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSS-GLIPAFEYAILSMQKGEKSDFF 90 (372)
Q Consensus 12 ~d~~i~k~il~~G~g~~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~-~~~~~le~~l~~m~~Ge~~~~~ 90 (372)
.++++.|+|+++|+|..|..||.|+|||++++.++|++||+++.++. |++|.+|.+ .+++||+.+|.+|++||++.|.
T Consensus 47 ~~~~~~~~~~~~g~g~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~-~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~~~~ 125 (338)
T 2if4_A 47 LDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQ-PIELVLGKEKKELAGLAIGVASMKSGERALVH 125 (338)
T ss_dssp EETTEEEEEEECCBSCCCCTTCEEEEEEEEEETTTCCCCEEHHHHTC-CEEEETTSCCGGGHHHHHHHHHCCBTCEEEEE
T ss_pred CCCCeEEEEEeCCCCCCCCCCCEEEEEEEEEEcCCCcEeecccCCCC-CeEEEcCCCCcccHHHHHHHhcCCCCCeEEEE
Confidence 56789999999999999999999999999999875679999987777 999999999 8999999999999999999999
Q ss_pred ecCCCccCCCCC--CCCCCCCCcEEEEEEEEeeecCccccccccccccccccCccCchhHHHHHHHHHHHHHhhHHHHhc
Q psy8368 91 ASYELCFGALGC--PPRIPAKADLLFEVHLINFSIDPQVVRSSADIESDFIDSQVEEPAFAKVLKRAQELGASGKNAFND 168 (372)
Q Consensus 91 i~~~~~yg~~g~--~~~ip~~~~~~~~iel~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~k~~Gn~~~~~ 168 (372)
||+.++||..|. ++.||++++++|.|++..+. .... ....|.+ ++++.++.+..++..|+.+++.
T Consensus 126 i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~-~~~e------~~~~~~~------~~~~~~~~a~~~~~~g~~~~~~ 192 (338)
T 2if4_A 126 VGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFD-ETKE------GKARSDM------TVEERIGAADRRKMDGNSLFKE 192 (338)
T ss_dssp ECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEE-CCCC------CBTTTBC------CHHHHHHHHHHHHHHHHHTCSS
T ss_pred ECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEec-CCcc------ccccccC------CHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999887 35799999999999999988 3211 1223444 3455688999999999999999
Q ss_pred cCHHHHHHHHHHHHHhhhhcc--CCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHH
Q psy8368 169 KNIVSAVRRYRDAVKLLINTQ--VTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFF 246 (372)
Q Consensus 169 g~~~~A~~~y~~al~~~~~~~--~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~ 246 (372)
|+|.+|+..|.+|+.+.+... ............+...+++|+|.||+++++|++|+.+|+++|+ ++|++.++|+
T Consensus 193 g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~----~~p~~~~a~~ 268 (338)
T 2if4_A 193 EKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLT----EEEKNPKALF 268 (338)
T ss_dssp SCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHH----HCTTCHHHHH
T ss_pred CCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCCHHHHH
Confidence 999999999999999876532 1112223344455567999999999999999999999999998 8999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q psy8368 247 VWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSSSSSP 313 (372)
Q Consensus 247 r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (372)
++|.+|..+|+|++|+.+|+++++++|++. .++..|..+..........++..|+++|......
T Consensus 269 ~lg~a~~~~g~~~~A~~~l~~al~l~p~~~---~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~ 332 (338)
T 2if4_A 269 RRGKAKAELGQMDSARDDFRKAQKYAPDDK---AIRRELRALAEQEKALYQKQKEMYKGIFKGKDEG 332 (338)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHTTC-------------------------------------------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCC
Confidence 999999999999999999999999999999 9999999998888888888999999999877654
No 3
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=100.00 E-value=6.7e-38 Score=297.05 Aligned_cols=277 Identities=21% Similarity=0.322 Sum_probs=244.3
Q ss_pred CCCccccCCCcEEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCc---cchHHHHHhcc
Q psy8368 5 PYGKEQIQDGKLMKKIKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSG---LIPAFEYAILS 80 (372)
Q Consensus 5 ~~~~di~~d~~i~k~il~~G~g~~-~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~---~~~~le~~l~~ 80 (372)
+.+.++++|++|+|+|+++|+|.. |..|+.|+|||++++ + |.+||++ |++|.+|.|. ++++|+.||.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~-g~~fd~~------~~~f~lG~g~~~~~~~~~e~al~~ 87 (336)
T 1p5q_A 16 PRGSHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-K-DKLFDQR------ELRFEIGEGENLDLPYGLERAIQR 87 (336)
T ss_dssp ------CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-T-TEEEEEE------EEEEETTCGGGGTCCHHHHHHHTT
T ss_pred ccceeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-C-CEEEecC------CeEEEeCCCCccccchHHHHHHhc
Confidence 346788899999999999999984 999999999999998 5 4699997 8999999886 58999999999
Q ss_pred CCCCcEEEEEecCCCccCCCCCCC-CCCCCCcEEEEEEEEeeecCccccccccccccccccCccCchhHHHHHHHHHHHH
Q psy8368 81 MQKGEKSDFFASYELCFGALGCPP-RIPAKADLLFEVHLINFSIDPQVVRSSADIESDFIDSQVEEPAFAKVLKRAQELG 159 (372)
Q Consensus 81 m~~Ge~~~~~i~~~~~yg~~g~~~-~ip~~~~~~~~iel~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~k 159 (372)
|+.||++.+.|+|.++||..|.+. .||+++++.|.+.+.++. . +.. .|.+ ..+.....+..++
T Consensus 88 ~~~Ge~~~l~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~-~-----A~~----~~~~------a~~~~p~~a~~~~ 151 (336)
T 1p5q_A 88 MEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFE-K-----AKE----SWEM------NSEEKLEQSTIVK 151 (336)
T ss_dssp CCTTCEEEEEECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEE-C-----CCC----GGGC------CHHHHHHHHHHHH
T ss_pred CCCCCeEEEEECCccccCcCCCCccCCCCCCeEEEEEEEeecc-c-----ccc----hhcC------CHHHHHHHHHHHH
Confidence 999999999999999999999876 699999999999999988 2 111 2322 2233457789999
Q ss_pred HhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCC
Q psy8368 160 ASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFAT 239 (372)
Q Consensus 160 ~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p 239 (372)
..|+.+++.|+|.+|+..|.+|+.+.+.......+.......+...+++|+|.||+++|+|++|+.+|+++|+ ++|
T Consensus 152 ~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~----~~p 227 (336)
T 1p5q_A 152 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALE----LDS 227 (336)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCC
Confidence 9999999999999999999999999887765556667778888899999999999999999999999999998 999
Q ss_pred CchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q psy8368 240 KDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSSSSS 312 (372)
Q Consensus 240 ~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (372)
+++++++++|.+|..+|++++|+.+|++|++++|++. .++..++.+...++++.++++..|++||.+...
T Consensus 228 ~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~---~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 297 (336)
T 1p5q_A 228 NNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNK---AAKTQLAVCQQRIRRQLAREKKLYANMFERLAE 297 (336)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999 999999999999999999999999999975443
No 4
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.93 E-value=3.7e-24 Score=210.89 Aligned_cols=220 Identities=17% Similarity=0.202 Sum_probs=181.8
Q ss_pred ccccCCCcEEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCc---cchHHHHHhccCCC
Q psy8368 8 KEQIQDGKLMKKIKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSG---LIPAFEYAILSMQK 83 (372)
Q Consensus 8 ~di~~d~~i~k~il~~G~g~~-~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~---~~~~le~~l~~m~~ 83 (372)
.+++.|+++.++|+++|.|.. |..|+.|++||++++ +| .+|+++ +++|.+|+|. ++++|+.||..|+.
T Consensus 140 ~~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~g-~~f~~~------~~~f~~g~g~~~~v~~~~e~al~~~~~ 211 (457)
T 1kt0_A 140 EDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRC-GG-RMFDCR------DVAFTVGEGEDHDIPIGIDKALEKMQR 211 (457)
T ss_dssp EETTSSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEE-TT-EEEEEE------EEEEETTCGGGGTCCHHHHHHHTTCCB
T ss_pred ccccCCcceEEEEEecCCCCCCCCCCCEEEEEEEEEe-CC-eEEecC------ceEEEeCCCccccCChHHHHHHHhCCC
Confidence 467789999999999999976 999999999999998 44 699984 7999999774 89999999999999
Q ss_pred CcEEEEEecCCCccCCCCCCC-CCCCCCcEEEEEEEEeeecCccccccccccccccccCccCc-----------------
Q psy8368 84 GEKSDFFASYELCFGALGCPP-RIPAKADLLFEVHLINFSIDPQVVRSSADIESDFIDSQVEE----------------- 145 (372)
Q Consensus 84 Ge~~~~~i~~~~~yg~~g~~~-~ip~~~~~~~~iel~~~~~~~~~~~~~~~~~~~~~~~~~e~----------------- 145 (372)
||++.+.++|.++|+..|.+. .||+++.+.|.+.+..+. .. .. .|.+.....
T Consensus 212 ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~-~A-----~~----~~~~~~~~~~~~a~~~~~~G~~~~~~ 281 (457)
T 1kt0_A 212 EEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFE-KA-----KE----SWEMDTKEKLEQAAIVKEKGTVYFKG 281 (457)
T ss_dssp TCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEE-CC-----CC----GGGSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEECcccccCCCCCcccCCCCCCEEEEEhhhhhcc-cC-----cc----hhhcCHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999998765 699999999999999887 21 11 222221110
Q ss_pred -------hhHHHHHH-------------------HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHH
Q psy8368 146 -------PAFAKVLK-------------------RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQL 199 (372)
Q Consensus 146 -------~~~~~~~~-------------------~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~ 199 (372)
..+...++ .+..+.+.|..+++.|+|.+|+..|.+||.+.+..
T Consensus 282 g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~----------- 350 (457)
T 1kt0_A 282 GKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSAN----------- 350 (457)
T ss_dssp TCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----------
T ss_pred CCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc-----------
Confidence 11111111 15677899999999999999999999999997665
Q ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHH
Q psy8368 200 EEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKH 264 (372)
Q Consensus 200 ~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~ 264 (372)
..+++++|.||+.+++|++|+.+++++++ ++|++..++..++.++..++++++|...
T Consensus 351 ----~~a~~~~g~a~~~~g~~~~A~~~~~~al~----l~P~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 351 ----EKGLYRRGEAQLLMNEFESAKGDFEKVLE----VNPQNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp ----HHHHHHHHHHHHHTTCHHHHHHHHHHHHT----TC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHccCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68899999999999999999999999998 9999999999999999999999988754
No 5
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.92 E-value=1.6e-24 Score=179.35 Aligned_cols=114 Identities=32% Similarity=0.605 Sum_probs=108.0
Q ss_pred Ccccc--CCCcEEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCC
Q psy8368 7 GKEQI--QDGKLMKKIKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQK 83 (372)
Q Consensus 7 ~~di~--~d~~i~k~il~~G~g~~-~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~ 83 (372)
++||+ +|++++|+|+++|+|.. |..||.|+|||++++.+| ++||+++.++. |++|.+|.+.+++||+.+|.+|++
T Consensus 26 ~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG-~~fdss~~~~~-p~~f~lG~g~~i~G~e~~l~gm~~ 103 (144)
T 3o5e_A 26 GEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG-KKFDSSHDRNE-PFVFSLGKGQVIKAWDIGVATMKK 103 (144)
T ss_dssp CEECCSSCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTS-CEEEESGGGTS-CEEEETTSSSSCHHHHHHHTTCCB
T ss_pred cccccccCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCC-CEEEeecccCC-CeEEEeCCCcccHHHHHHHhCCCC
Confidence 78998 89999999999999984 999999999999998765 59999988777 999999999999999999999999
Q ss_pred CcEEEEEecCCCccCCCCCCCCCCCCCcEEEEEEEEeee
Q psy8368 84 GEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFS 122 (372)
Q Consensus 84 Ge~~~~~i~~~~~yg~~g~~~~ip~~~~~~~~iel~~~~ 122 (372)
||++.|.|||.++||..|.++.||++++++|+|+|++++
T Consensus 104 Ge~~~v~ipp~~aYG~~g~~~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 104 GEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp TCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred CCEEEEEEChHHCcCCCCCCCCcCCCCeEEEEEEEEEec
Confidence 999999999999999999988999999999999999987
No 6
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.92 E-value=9.6e-25 Score=178.61 Aligned_cols=117 Identities=32% Similarity=0.583 Sum_probs=102.6
Q ss_pred CCCccccCCCcEEEEEEecCCCCCCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCC
Q psy8368 5 PYGKEQIQDGKLMKKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKG 84 (372)
Q Consensus 5 ~~~~di~~d~~i~k~il~~G~g~~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~G 84 (372)
+.+.||+.+++++++++++|+|..+..||.|+|||++++.+++++||+++.+.. |++|.+|.+.+++||+++|.+|++|
T Consensus 17 ~~~~~v~~~~gl~~~vl~~G~g~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~-p~~f~lG~g~~i~G~e~aL~gm~~G 95 (134)
T 3b7x_A 17 QRMLDISGDRGVLKDVIREGAGDLVAPDASVLVKYSGYLEHMDRPFDSNYFRKT-PRLMKLGEDITLWGMELGLLSMRRG 95 (134)
T ss_dssp TTCEESSSSSSEEEEEEECCEEEECCTTCEEEEEEEEECTTCSSCSEEC--------CEEC-CCCCCHHHHHHHHTCEET
T ss_pred cccceeeCCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCeEEEecCCCCC-CEEEEcCCcchhHHHHHHHhCCCCC
Confidence 357899999999999999999998999999999999998754569999987667 9999999999999999999999999
Q ss_pred cEEEEEecCCCccCCCCCCCCCCCCCcEEEEEEEEeee
Q psy8368 85 EKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFS 122 (372)
Q Consensus 85 e~~~~~i~~~~~yg~~g~~~~ip~~~~~~~~iel~~~~ 122 (372)
|++.|.|||+++||..+.++.||+|++++|+|+|+++.
T Consensus 96 e~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 96 ELARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp CEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred CEEEEEECHHHCcCCCCCCCCcCcCCeEEEEEEEEEEe
Confidence 99999999999999999888899999999999999886
No 7
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.91 E-value=4.8e-24 Score=173.17 Aligned_cols=114 Identities=32% Similarity=0.605 Sum_probs=107.5
Q ss_pred Ccccc--CCCcEEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCC
Q psy8368 7 GKEQI--QDGKLMKKIKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQK 83 (372)
Q Consensus 7 ~~di~--~d~~i~k~il~~G~g~~-~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~ 83 (372)
++||+ +|++++|+++++|+|.. |..||.|+|||++++.+| ++||+++.++. |++|.+|.+.+++||+.+|.+|++
T Consensus 10 ~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG-~~fdss~~~~~-p~~f~lG~g~~i~G~e~~l~gm~~ 87 (128)
T 3o5q_A 10 GEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG-KKFDSSHDRNE-PFVFSLGKGQVIKAWDIGVATMKK 87 (128)
T ss_dssp CEECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTS-CEEEEHHHHTS-CEEEETTSSSSCHHHHHHHTTCCT
T ss_pred cceecccCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCC-CEEEecCCCCC-CEEEEECCCCccHHHHHHHhcCCC
Confidence 78887 99999999999999985 999999999999999765 59999987677 999999999999999999999999
Q ss_pred CcEEEEEecCCCccCCCCCCCCCCCCCcEEEEEEEEeee
Q psy8368 84 GEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFS 122 (372)
Q Consensus 84 Ge~~~~~i~~~~~yg~~g~~~~ip~~~~~~~~iel~~~~ 122 (372)
|+++.|.|||.++||..+.++.||++++++|+|+|++++
T Consensus 88 Ge~~~v~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~i~ 126 (128)
T 3o5q_A 88 GEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK 126 (128)
T ss_dssp TCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred CCEEEEEEChHHcCCCCCCCCCcCCCCEEEEEEEEEEec
Confidence 999999999999999999988999999999999999987
No 8
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.91 E-value=1.5e-23 Score=171.69 Aligned_cols=115 Identities=33% Similarity=0.581 Sum_probs=107.2
Q ss_pred CCcccc--CCCcEEEEEEecCCCC-CCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCC
Q psy8368 6 YGKEQI--QDGKLMKKIKEKGFGE-NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQ 82 (372)
Q Consensus 6 ~~~di~--~d~~i~k~il~~G~g~-~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~ 82 (372)
.|+||+ .+++++|+++++|+|. .|..||.|+|||++++.+| ++||+++.++. |++|.+|.+.+++||+.+|.+|+
T Consensus 4 ~~~dv~~~~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG-~~fdss~~~~~-p~~f~lG~~~vi~G~e~~l~gm~ 81 (135)
T 1r9h_A 4 EKIDITPKKDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENG-TKFDSSRDRGD-QFSFNLGRGNVIKGWDLGVATMT 81 (135)
T ss_dssp -CEECSTTCCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTS-CEEEEHHHHTS-CEEEETTTTSSCHHHHHHHTTCC
T ss_pred cceecccCCCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCC-CEEEecCcCCC-CEEEEeCCCCccHHHHHHHhcCC
Confidence 378999 9999999999999997 4999999999999998765 59999976566 99999999999999999999999
Q ss_pred CCcEEEEEecCCCccCCCCCCCCCCCCCcEEEEEEEEeee
Q psy8368 83 KGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFS 122 (372)
Q Consensus 83 ~Ge~~~~~i~~~~~yg~~g~~~~ip~~~~~~~~iel~~~~ 122 (372)
+||++.|.|||+++||..+.++.||++++++|+|+|.++.
T Consensus 82 ~Ge~~~v~ip~~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~ 121 (135)
T 1r9h_A 82 KGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVELFEWS 121 (135)
T ss_dssp BTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred CCCEEEEEEChHHcCCCCCCCCCcCcCCcEEEEEEEEEee
Confidence 9999999999999999999888999999999999999998
No 9
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.91 E-value=1.8e-23 Score=170.10 Aligned_cols=118 Identities=31% Similarity=0.448 Sum_probs=106.1
Q ss_pred CCCCccccCCCcEEEEEEecC---CCCCCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhcc
Q psy8368 4 VPYGKEQIQDGKLMKKIKEKG---FGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILS 80 (372)
Q Consensus 4 ~~~~~di~~d~~i~k~il~~G---~g~~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~ 80 (372)
.+.+.+++.+|.++++|+++| +|..|..||.|+|||++++..++++||+++.+.. |++|.+|.+.+++||+.+|.+
T Consensus 6 ~~~~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~-p~~f~lG~g~~i~g~e~~l~g 84 (129)
T 2vn1_A 6 EFEKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNV-PFKFHLEQGEVIKGWDICVSS 84 (129)
T ss_dssp -CEEEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTC-CEEEETTSSSSCHHHHHHHTT
T ss_pred ccCCcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCCc-cEEEEeCCCCcCHHHHHHHhC
Confidence 345678889999999999976 4566999999999999998333569999987667 999999999999999999999
Q ss_pred CCCCcEEEEEecCCCccCCCCCCCCCCCCCcEEEEEEEEeee
Q psy8368 81 MQKGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFS 122 (372)
Q Consensus 81 m~~Ge~~~~~i~~~~~yg~~g~~~~ip~~~~~~~~iel~~~~ 122 (372)
|++||++.|.|||+++||..+.++.||+|++++|+|+|+++.
T Consensus 85 m~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~vel~~v~ 126 (129)
T 2vn1_A 85 MRKNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFR 126 (129)
T ss_dssp CCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred CCCCCEEEEEEChHHcCCCCCCCCCcCCCCeEEEEEEEEEEe
Confidence 999999999999999999999888899999999999999987
No 10
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.90 E-value=4.1e-23 Score=177.00 Aligned_cols=126 Identities=25% Similarity=0.433 Sum_probs=103.7
Q ss_pred CCCcEEEEEEecCCCCCCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCC-ccchHHHHHhccCCCCcEEEEE
Q psy8368 12 QDGKLMKKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSS-GLIPAFEYAILSMQKGEKSDFF 90 (372)
Q Consensus 12 ~d~~i~k~il~~G~g~~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~-~~~~~le~~l~~m~~Ge~~~~~ 90 (372)
.+++++++|+++|+|..|..||.|+|||++++.++|++|++++.++. |+.|.+|.+ .+++||+.+|.+|++|+++.|.
T Consensus 47 ~~~gl~~~vl~~G~G~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~-p~~f~lG~g~~vi~G~eeaL~gMk~Ge~~~v~ 125 (180)
T 2f4e_A 47 LDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQ-PIELVLGKEKKELAGLAIGVASMKSGERALVH 125 (180)
T ss_dssp EETTEEEEEEECCBSCCBCTTCEEEEEEEEEETTTCCEEEETTTTTC-CEEEETTSCCGGGHHHHHHHTTCCBTCEEEEE
T ss_pred CCCceEEEEEeCCCCCCCCCCCEEEEEEEEEECCCCcEEeccCccCC-CEEEEeCCCCchhHHHHHHHhCCCCCCEEEEE
Confidence 55689999999999998999999999999999865679999987777 999999999 9999999999999999999999
Q ss_pred ecCCCccCCCCC--CCCCCCCCcEEEEEEEEeeecCccccccccccccccccCccCc
Q psy8368 91 ASYELCFGALGC--PPRIPAKADLLFEVHLINFSIDPQVVRSSADIESDFIDSQVEE 145 (372)
Q Consensus 91 i~~~~~yg~~g~--~~~ip~~~~~~~~iel~~~~~~~~~~~~~~~~~~~~~~~~~e~ 145 (372)
||++++||..+. ++.||+|++++|+|+|+++. .... -+..|.|+.+|+
T Consensus 126 iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~-~~~e------~~~~~~mt~eEr 175 (180)
T 2f4e_A 126 VGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFD-ETKE------GKARSDMTVEER 175 (180)
T ss_dssp ECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEES-CBCC------C-----------
T ss_pred ECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEe-cCcc------ccccccCCHHHH
Confidence 999999999886 45799999999999999998 3221 233688887765
No 11
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.89 E-value=8.6e-23 Score=163.44 Aligned_cols=112 Identities=29% Similarity=0.365 Sum_probs=104.0
Q ss_pred CCCccccCCCcEEEEEEecCCCC--CCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCC
Q psy8368 5 PYGKEQIQDGKLMKKIKEKGFGE--NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQ 82 (372)
Q Consensus 5 ~~~~di~~d~~i~k~il~~G~g~--~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~ 82 (372)
..|.+++.+|+++++++++|+|. .|..||.|++||++++.+| ++|+++ . |++|.+|.+.+++||+.+|.+|+
T Consensus 4 ~~~~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG-~~~ds~----~-p~~f~lG~~~~i~g~e~~l~gm~ 77 (118)
T 2awg_A 4 EEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENG-TRVQEE----P-ELVFTLGDCDVIQALDLSVPLMD 77 (118)
T ss_dssp TCEEESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTS-CEEEEE----E-EEEEETTSSCSCHHHHHHGGGSC
T ss_pred ccceEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCC-CEEECC----C-CEEEEECCCChhHHHHHHHhCCC
Confidence 46899999999999999999997 5999999999999998664 589984 4 99999999999999999999999
Q ss_pred CCcEEEEEecCCCccCCCCCCCCCCCCCcEEEEEEEEeee
Q psy8368 83 KGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFS 122 (372)
Q Consensus 83 ~Ge~~~~~i~~~~~yg~~g~~~~ip~~~~~~~~iel~~~~ 122 (372)
+|+++.|.||++++||..+.++.||++++++|+|+|++++
T Consensus 78 ~Ge~~~~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 78 VGETAMVTADSKYCYGPQGRSPYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp TTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred CCCEEEEEEChHHccCCCCCCCccCCCCeEEEEEEEEEec
Confidence 9999999999999999999888899999999999999886
No 12
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.89 E-value=1.5e-22 Score=160.76 Aligned_cols=108 Identities=26% Similarity=0.435 Sum_probs=100.1
Q ss_pred CCcEEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEEEEEe
Q psy8368 13 DGKLMKKIKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKSDFFA 91 (372)
Q Consensus 13 d~~i~k~il~~G~g~~-~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~~i 91 (372)
++|++++++++|+|.. |..||.|++||++++.+| ++||+++.++. |++|.+|.+.+++||+++|.+|++||++.|.|
T Consensus 5 ~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG-~~~d~s~~~~~-p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~i 82 (113)
T 1yat_A 5 EGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENG-QKFDSSVDRGS-PFQCNIGVGQVIKGWDVGIPKLSVGEKARLTI 82 (113)
T ss_dssp GGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTS-CEEEESTTTTC-CEEEETTSSSSCHHHHHHGGGCCTTCEEEEEE
T ss_pred CCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCC-CEEEecCCCCC-cEEEEeCCCCccHHHHHHHhCCCCCCEEEEEE
Confidence 3579999999999998 999999999999998664 59999987667 99999999999999999999999999999999
Q ss_pred cCCCccCCCCCCCCCCCCCcEEEEEEEEeee
Q psy8368 92 SYELCFGALGCPPRIPAKADLLFEVHLINFS 122 (372)
Q Consensus 92 ~~~~~yg~~g~~~~ip~~~~~~~~iel~~~~ 122 (372)
||+++||..+.++.||+|++++|+|+|++++
T Consensus 83 p~~~ayG~~~~~~~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 83 PGPYAYGPRGFPGLIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp CGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred CHHHCcCCCCCCCCcCCCCeEEEEEEEEEeC
Confidence 9999999999888899999999999999764
No 13
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.89 E-value=1.3e-22 Score=159.68 Aligned_cols=106 Identities=28% Similarity=0.469 Sum_probs=98.7
Q ss_pred cEEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEEEEEecC
Q psy8368 15 KLMKKIKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKSDFFASY 93 (372)
Q Consensus 15 ~i~k~il~~G~g~~-~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~~i~~ 93 (372)
|++++++++|+|.. |..||.|++||++++.+| ++||+++.++. |++|.+|.+.+++||+++|.+|++||++.|.|||
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG-~~~d~s~~~~~-p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip~ 78 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDG-KKFDSSRDRNK-PFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISP 78 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTS-CEEEEHHHHTS-CEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCC-CEEEecCCCCC-CEEEEeCCCChHHHHHHHHhCCCCCCEEEEEECH
Confidence 68899999999988 999999999999998764 59999986556 9999999999999999999999999999999999
Q ss_pred CCccCCCCCCCCCCCCCcEEEEEEEEeee
Q psy8368 94 ELCFGALGCPPRIPAKADLLFEVHLINFS 122 (372)
Q Consensus 94 ~~~yg~~g~~~~ip~~~~~~~~iel~~~~ 122 (372)
+++||..+.++.||++++++|+|+|++++
T Consensus 79 ~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 79 DYAYGATGHPGIIPPHATLVFDVELLKLE 107 (107)
T ss_dssp GGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred HHccCCCCCCCCcCCCCeEEEEEEEEEeC
Confidence 99999999888899999999999999763
No 14
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.89 E-value=2.9e-22 Score=163.37 Aligned_cols=109 Identities=27% Similarity=0.396 Sum_probs=101.3
Q ss_pred cCCCcEEEEEEecCCCCCCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEEEEE
Q psy8368 11 IQDGKLMKKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKSDFF 90 (372)
Q Consensus 11 ~~d~~i~k~il~~G~g~~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~~ 90 (372)
+.+.++.++++++|+|..|..||.|+|+|++++.+| ++||+++.++. |++|.+|.+.+++||+++|.+|++||++.|.
T Consensus 25 ~~~~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG-~~fdss~~~~~-p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v~ 102 (133)
T 2y78_A 25 TTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG-QKFDSSKDRND-PFAFVLGGGMVIKGWDEGVQGMKVGGVRRLT 102 (133)
T ss_dssp ECTTSCEEEEEECCSSCBCCTTSEEEEEEEEEETTS-CEEEETTTTTC-CEEEETTSSSSCHHHHHHSTTCBTTCEEEEE
T ss_pred ECCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCC-CEEeccCcCCC-CEEEEeCCCChhHHHHHHHcCCCCCCEEEEE
Confidence 467889999999999988999999999999998664 59999987667 9999999999999999999999999999999
Q ss_pred ecCCCccCCCCCCCCCCCCCcEEEEEEEEee
Q psy8368 91 ASYELCFGALGCPPRIPAKADLLFEVHLINF 121 (372)
Q Consensus 91 i~~~~~yg~~g~~~~ip~~~~~~~~iel~~~ 121 (372)
||++++||..+.++.||||++++|+|+|++|
T Consensus 103 ip~~~aYG~~~~~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 103 IPPQLGYGARGAGGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred ECcHHhCCCCCCCCCCCCCCeEEEEEEEEEC
Confidence 9999999999988789999999999999865
No 15
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.89 E-value=2.6e-22 Score=161.00 Aligned_cols=107 Identities=31% Similarity=0.479 Sum_probs=98.3
Q ss_pred CCcEEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCceeEeecccC-------CCcCeEEEcCCCccchHHHHHhccCCCC
Q psy8368 13 DGKLMKKIKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLR-------KSIPERFQLGSSGLIPAFEYAILSMQKG 84 (372)
Q Consensus 13 d~~i~k~il~~G~g~~-~~~g~~V~v~y~~~~~~~~~~~dst~~~-------~~~~~~~~~g~~~~~~~le~~l~~m~~G 84 (372)
..+++|+|+++|+|.. |..||.|+|||++++.+| ++||+++.. .. |++|.+|.+.+++||+++|.+|++|
T Consensus 3 p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG-~~fdss~~~~~~~~~~~~-p~~f~lG~~~~i~G~e~~l~gm~~G 80 (119)
T 3kz7_A 3 PPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDG-TVFDTNIQTSSKKKKNAK-PLSFKVGVGKVIRGWDEALLTMSKG 80 (119)
T ss_dssp SCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTS-CEEEECCCCSSSTTTTCC-CEEEETTSSSSCHHHHHHHTTCCTT
T ss_pred CCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCC-CEEEeccccccccccCCC-CEEEEECCCChhHHHHHHHhCCCCC
Confidence 3589999999999975 999999999999998765 599999753 36 9999999999999999999999999
Q ss_pred cEEEEEecCCCccCCCCCCC-CCCCCCcEEEEEEEEee
Q psy8368 85 EKSDFFASYELCFGALGCPP-RIPAKADLLFEVHLINF 121 (372)
Q Consensus 85 e~~~~~i~~~~~yg~~g~~~-~ip~~~~~~~~iel~~~ 121 (372)
|++.|.||++++||..|.++ .||++++++|+|+|+++
T Consensus 81 e~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 81 EKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp CEEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEE
T ss_pred CEEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEe
Confidence 99999999999999999876 79999999999999976
No 16
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.89 E-value=2.4e-22 Score=167.76 Aligned_cols=112 Identities=29% Similarity=0.365 Sum_probs=103.5
Q ss_pred CCCccccCCCcEEEEEEecCCCC--CCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCC
Q psy8368 5 PYGKEQIQDGKLMKKIKEKGFGE--NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQ 82 (372)
Q Consensus 5 ~~~~di~~d~~i~k~il~~G~g~--~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~ 82 (372)
..|.+++.+|.+.++|+++|+|. .|..||.|+|||++++.+| ++||++ . |++|.+|.+.+++||+++|.+|+
T Consensus 34 ~~~~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG-~~fds~----~-p~~f~lG~g~vi~G~eeaL~gMk 107 (157)
T 2jwx_A 34 EEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENG-TRVQEE----P-ELVFTLGDCDVIQALDLSVPLMD 107 (157)
T ss_dssp CSCEESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTS-CEEEEE----E-EEEEETTTTSSCHHHHHHTTTSC
T ss_pred cccceECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCC-CEeecC----C-CEEEEeCCCChhHHHHHHHcCCC
Confidence 35778999999999999999997 6999999999999998765 599984 4 99999999999999999999999
Q ss_pred CCcEEEEEecCCCccCCCC-CCCCCCCCCcEEEEEEEEeee
Q psy8368 83 KGEKSDFFASYELCFGALG-CPPRIPAKADLLFEVHLINFS 122 (372)
Q Consensus 83 ~Ge~~~~~i~~~~~yg~~g-~~~~ip~~~~~~~~iel~~~~ 122 (372)
+|+++.|.||++++||..+ .++.||+|++++|+|+|+++.
T Consensus 108 ~Ge~~~v~IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~ 148 (157)
T 2jwx_A 108 VGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAV 148 (157)
T ss_dssp TTCEEEEEECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEEE
T ss_pred CCCEEEEEECchhcCCcccccCCCcCCCCeEEEEEEEEEEE
Confidence 9999999999999999999 666899999999999999998
No 17
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.88 E-value=7.5e-22 Score=160.34 Aligned_cols=108 Identities=32% Similarity=0.514 Sum_probs=98.5
Q ss_pred CCCcEEEE--EEecCCCCC-CCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEEE
Q psy8368 12 QDGKLMKK--IKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKSD 88 (372)
Q Consensus 12 ~d~~i~k~--il~~G~g~~-~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~ 88 (372)
...|++++ ++++|+|.. |..||.|+|+|++++.+| ++||+++.++. |++|.+|.+.+++||+++|.+|++||++.
T Consensus 20 ~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG-~~fdss~~~~~-p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~ 97 (130)
T 2lgo_A 20 GSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDG-KQFDSSRSRGK-PFQFTLGAGEVIKGWDQGVATMTLGEKAL 97 (130)
T ss_dssp SSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTS-CEEECTTTTTC-CEEEETTSTTSCHHHHHHHHHSCTTEEEE
T ss_pred CCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCC-CEEEccCcCCC-CEEEEeCCCCccHHHHHHHhCCCCCCEEE
Confidence 45566555 999999998 999999999999998664 59999987667 99999999999999999999999999999
Q ss_pred EEecCCCccCCCCCCCCCCCCCcEEEEEEEEee
Q psy8368 89 FFASYELCFGALGCPPRIPAKADLLFEVHLINF 121 (372)
Q Consensus 89 ~~i~~~~~yg~~g~~~~ip~~~~~~~~iel~~~ 121 (372)
|.|||+++||..+.++.||+|++++|+|+|++|
T Consensus 98 v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 98 FTIPYQLAYGERGYPPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp EEECTTTSTTTTCCSTTSCSSCCEEEEEEEEEC
T ss_pred EEECcHHHCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 999999999999988889999999999999865
No 18
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.88 E-value=1.1e-21 Score=158.59 Aligned_cols=111 Identities=23% Similarity=0.369 Sum_probs=100.8
Q ss_pred ccCCCcEEEEEEecCC--CCCCCCCCEEEEEEEEEEcCCceeEeeccc--CCCcCeEEEcCCCccchHHHHHhccCCCCc
Q psy8368 10 QIQDGKLMKKIKEKGF--GENPVLGAHVQVHYMYYAEANELPIDITYL--RKSIPERFQLGSSGLIPAFEYAILSMQKGE 85 (372)
Q Consensus 10 i~~d~~i~k~il~~G~--g~~~~~g~~V~v~y~~~~~~~~~~~dst~~--~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge 85 (372)
+..++++.++++++|+ |..|..||.|+|||++++.+++++||+++. ... |++|.+|.+.+++||+++|.+|++||
T Consensus 8 ~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~-p~~f~lG~~~~i~G~e~~l~gm~~Ge 86 (125)
T 4dip_A 8 LIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQ-PIWFTLGILEALKGWDQGLKGMCVGE 86 (125)
T ss_dssp GCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTC-CEEEETTSCSSCHHHHHHSTTCCTTC
T ss_pred EECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCc-CEEEEeCCCChhHHHHHHHhCCCCCC
Confidence 4567889999999998 667999999999999999834569999974 346 99999999999999999999999999
Q ss_pred EEEEEecCCCccCCCCCCCCCCCCCcEEEEEEEEeee
Q psy8368 86 KSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFS 122 (372)
Q Consensus 86 ~~~~~i~~~~~yg~~g~~~~ip~~~~~~~~iel~~~~ 122 (372)
++.|.|||+++||..+.+ .||++++++|+|+|+++.
T Consensus 87 ~~~~~ip~~~aYG~~g~~-~Ip~~~~l~f~vel~~i~ 122 (125)
T 4dip_A 87 KRKLIIPPALGYGKEGKG-KIPPESTLIFNIDLLEIR 122 (125)
T ss_dssp EEEEEECGGGTTTTTCBT-TBCTTCCEEEEEEEEEEE
T ss_pred EEEEEEChHHhcCCCCCC-CCCCCCeEEEEEEEEEEE
Confidence 999999999999999866 799999999999999987
No 19
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.88 E-value=5.2e-22 Score=166.98 Aligned_cols=153 Identities=21% Similarity=0.265 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhcc---CCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHH
Q psy8368 150 KVLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQ---VTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDC 226 (372)
Q Consensus 150 ~~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~---~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~ 226 (372)
+.++.+..+++.|+.+++.|+|.+|+..|.+|+.+++... .+.++...........+++|+|.||+++|+|.+|+.+
T Consensus 6 e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~ 85 (162)
T 3rkv_A 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEET 85 (162)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 4578899999999999999999999999999999975532 3344455566777789999999999999999999999
Q ss_pred HHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8368 227 ASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKM 306 (372)
Q Consensus 227 ~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (372)
|+++|+ ++|+++++|+++|.+|..+|+|++|+.+|+++++++|++. ..+...+..+...++.+.+++++.|++|
T Consensus 86 ~~~al~----~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~--~~~~~~l~~~~~~~~~~~~~~k~~~~~~ 159 (162)
T 3rkv_A 86 SSEVLK----REETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA--SVVAREMKIVTERRAEKKADSRVTYSKM 159 (162)
T ss_dssp HHHHHH----HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH--HHHHHHHHHHHHHHHHHTTSSCC-----
T ss_pred HHHHHh----cCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999998 8999999999999999999999999999999999999986 2568899999999999999999999999
Q ss_pred cc
Q psy8368 307 FS 308 (372)
Q Consensus 307 ~~ 308 (372)
|+
T Consensus 160 f~ 161 (162)
T 3rkv_A 160 FQ 161 (162)
T ss_dssp --
T ss_pred cC
Confidence 86
No 20
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.87 E-value=3.4e-22 Score=163.64 Aligned_cols=112 Identities=29% Similarity=0.365 Sum_probs=104.3
Q ss_pred CCCccccCCCcEEEEEEecCCCC--CCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCC
Q psy8368 5 PYGKEQIQDGKLMKKIKEKGFGE--NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQ 82 (372)
Q Consensus 5 ~~~~di~~d~~i~k~il~~G~g~--~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~ 82 (372)
+.|.+++.+|+++++|+++|+|. .|..||.|+|||++++.+| ++|+++ . |++|.+|.+.+++||+++|.+|+
T Consensus 8 ~~~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG-~~fds~----~-p~~f~lG~g~~i~G~e~~L~gm~ 81 (135)
T 2d9f_A 8 EEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENG-TRVQEE----P-ELVFTLGDCDVIQALDLSVPLMD 81 (135)
T ss_dssp SSCEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSS-CEEEEE----E-EEEEETTSCCSCTTTTTTGGGSC
T ss_pred ccCcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCC-CEEecC----C-CEEEEeCCCChhHHHHHHHhCCC
Confidence 57899999999999999999997 6999999999999998765 589983 4 99999999999999999999999
Q ss_pred CCcEEEEEecCCCccCCCC-CCCCCCCCCcEEEEEEEEeee
Q psy8368 83 KGEKSDFFASYELCFGALG-CPPRIPAKADLLFEVHLINFS 122 (372)
Q Consensus 83 ~Ge~~~~~i~~~~~yg~~g-~~~~ip~~~~~~~~iel~~~~ 122 (372)
+|+++.|.||++++||..+ .++.||+|++++|+|+|+++.
T Consensus 82 ~Ge~~~v~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~ 122 (135)
T 2d9f_A 82 VGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAV 122 (135)
T ss_dssp TTCEEEEEECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEE
T ss_pred CCCEEEEEEChhHccCcCCcCCCccCCCCeEEEEEEEEEee
Confidence 9999999999999999998 666899999999999999998
No 21
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.87 E-value=7.3e-22 Score=166.70 Aligned_cols=108 Identities=25% Similarity=0.427 Sum_probs=100.6
Q ss_pred cCCCcEEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEEEE
Q psy8368 11 IQDGKLMKKIKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKSDF 89 (372)
Q Consensus 11 ~~d~~i~k~il~~G~g~~-~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~ 89 (372)
+.++|++++++++|+|.. |..||.|+|||++++.+| ++||+++.++. |++|.+| .+++||+++|.+|++|+++.|
T Consensus 34 ~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG-~~fdss~~~g~-p~~f~lg--~vI~G~eeaL~gMk~Ge~~~~ 109 (167)
T 1jvw_A 34 KLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDG-TVFDSSRERGK-PTTFRPN--EVIKGWTEALQLMREGDRWRL 109 (167)
T ss_dssp ECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTS-CEEEEHHHHTS-CEEECGG--GSCHHHHHHHTTCCTTCEEEE
T ss_pred ECCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCC-CEEeeccccCC-CEEEEeC--chhHHHHHHHcCCCCCCEEEE
Confidence 466789999999999998 999999999999998765 59999987667 9999996 899999999999999999999
Q ss_pred EecCCCccCCCCCCCCCCCCCcEEEEEEEEeee
Q psy8368 90 FASYELCFGALGCPPRIPAKADLLFEVHLINFS 122 (372)
Q Consensus 90 ~i~~~~~yg~~g~~~~ip~~~~~~~~iel~~~~ 122 (372)
.|||+++||..+.++.||||++++|+|+|+++.
T Consensus 110 ~Ip~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~ 142 (167)
T 1jvw_A 110 FIPYDLAYGVTGGGGMIPPYSPLEFDVELISIK 142 (167)
T ss_dssp EECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEG
T ss_pred EECchhhCCCCCCCCCcCCCCeEEEEEEEEEEE
Confidence 999999999999888899999999999999998
No 22
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.87 E-value=3e-22 Score=167.64 Aligned_cols=111 Identities=20% Similarity=0.366 Sum_probs=95.4
Q ss_pred cCCCcEEEEEEecCCCCCC--CCCCEEEEEEEEEEcC-CceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEE
Q psy8368 11 IQDGKLMKKIKEKGFGENP--VLGAHVQVHYMYYAEA-NELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKS 87 (372)
Q Consensus 11 ~~d~~i~k~il~~G~g~~~--~~g~~V~v~y~~~~~~-~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~ 87 (372)
++++||.|+|+++|+|..| ..|+.|+|||++++.+ ++++||||+.++. |++|.+|.+++|+||+++|.+|++||++
T Consensus 7 ~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~-P~~f~lG~g~vI~Gwd~gl~~M~~Ge~~ 85 (165)
T 2lkn_A 7 LREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGK-PMELIIGKKFKLPVWETIVCTMREGEIA 85 (165)
T ss_dssp HHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTC-CEEEESSSSCSCSHHHHHHTTCCTTCEE
T ss_pred ccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCC-CEEEEecCCCccHHHHHHHhcCccCceE
Confidence 4788999999999999864 6899999999999864 3569999999888 9999999999999999999999999999
Q ss_pred EEEecCCCccCCC-----------CCCC--------------------------CCCCCCcEEEEEEEEeee
Q psy8368 88 DFFASYELCFGAL-----------GCPP--------------------------RIPAKADLLFEVHLINFS 122 (372)
Q Consensus 88 ~~~i~~~~~yg~~-----------g~~~--------------------------~ip~~~~~~~~iel~~~~ 122 (372)
.|+|||+++||.. +..+ .|+++++|+|+|+|++|.
T Consensus 86 ~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve 157 (165)
T 2lkn_A 86 QFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVE 157 (165)
T ss_dssp EEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEE
T ss_pred EEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEc
Confidence 9999999999821 1100 134457899999999999
No 23
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.87 E-value=2e-21 Score=170.33 Aligned_cols=110 Identities=26% Similarity=0.394 Sum_probs=102.9
Q ss_pred ccCCCcEEEEEEecCCCCCCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEEEE
Q psy8368 10 QIQDGKLMKKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKSDF 89 (372)
Q Consensus 10 i~~d~~i~k~il~~G~g~~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~ 89 (372)
++.++|++++++++|+|..|..||.|+|||++++.+| ++||+++..+. |++|.+|.+.+++||+++|.+|++|+++.|
T Consensus 100 ~~~~sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l~dG-~~fdss~~~~~-P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~v 177 (209)
T 3uf8_A 100 VTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDG-QKFDSSKDRND-PFAFVLGGGMVIKGWDEGVQGMKVGGVRRL 177 (209)
T ss_dssp EECTTSCEEEEEECCCSCBCCTTCEEEEEEEEEETTS-CEEEESGGGTC-CEEEETTSSSSCHHHHHHHTTCBTTCEEEE
T ss_pred cCCCCceEEEEEEcCCCCcCCCCCEEEEEEEEEECCC-CEEEEccccCC-CEEEEeCCCccchhHHHHHhCCCCCCEEEE
Confidence 4567899999999999988999999999999999765 59999988777 999999999999999999999999999999
Q ss_pred EecCCCccCCCCCCCCCCCCCcEEEEEEEEee
Q psy8368 90 FASYELCFGALGCPPRIPAKADLLFEVHLINF 121 (372)
Q Consensus 90 ~i~~~~~yg~~g~~~~ip~~~~~~~~iel~~~ 121 (372)
.|||+++||..|.++.||+|++++|+|+|++|
T Consensus 178 ~Ipp~~aYG~~g~~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 178 TIPPQLGYGARGAAGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred EECcHHhCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 99999999999998889999999999999875
No 24
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.86 E-value=2.3e-21 Score=169.78 Aligned_cols=105 Identities=24% Similarity=0.353 Sum_probs=98.2
Q ss_pred cCCCcEEEEEEecCCCCCCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEEEEE
Q psy8368 11 IQDGKLMKKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKSDFF 90 (372)
Q Consensus 11 ~~d~~i~k~il~~G~g~~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~~ 90 (372)
+.++|++++++++|+|..|..||.|+|||++++.+| ++|||+ +. |++|.+| .+++||+++|.+|++|+++.|.
T Consensus 114 ~~~sGl~y~vl~~G~G~~p~~gd~V~V~Y~g~l~dG-~vfDss---~~-P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~ 186 (219)
T 3oe2_A 114 ELADGILMTELTPGTGPKPDANGRVEVRYVGRLPDG-KIFDQS---TQ-PQWFRLD--SVISGWTSALQNMPTGAKWRLV 186 (219)
T ss_dssp ECGGGCEEEEEECCCSCCCCTTSEEEEEEEEECTTS-CEEEEC---SS-CEEEEGG--GSCHHHHHHHTTCCTTCEEEEE
T ss_pred ECCCCeEEEEEecCCCccCCCCCEEEEEEEEEECCC-CEeecc---CC-cEEEEec--chhHHHHHHHhCCCCCCEEEEE
Confidence 466789999999999998999999999999998875 599998 55 9999999 8999999999999999999999
Q ss_pred ecCCCccCCCCCCCCCCCCCcEEEEEEEEeee
Q psy8368 91 ASYELCFGALGCPPRIPAKADLLFEVHLINFS 122 (372)
Q Consensus 91 i~~~~~yg~~g~~~~ip~~~~~~~~iel~~~~ 122 (372)
|||+++||..|.++.|||+++++|+|+|++|+
T Consensus 187 IPp~lAYG~~g~~~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 187 IPSDQAYGAEGAGDLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred ECchhcCCCCCCCCCCCCCCeEEEEEEEEEEe
Confidence 99999999999988899999999999999886
No 25
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.86 E-value=4.4e-21 Score=175.92 Aligned_cols=114 Identities=36% Similarity=0.608 Sum_probs=108.0
Q ss_pred Ccccc--CCCcEEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCC
Q psy8368 7 GKEQI--QDGKLMKKIKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQK 83 (372)
Q Consensus 7 ~~di~--~d~~i~k~il~~G~g~~-~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~ 83 (372)
++||+ ++++++|+|+++|+|.. |..||.|+|||++++.+| ++||+++.++. |++|.+|.+.+++||+.+|.+|++
T Consensus 42 ~~di~~~~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG-~~fdss~~~~~-p~~f~lG~g~vi~G~e~aL~gm~~ 119 (280)
T 1q1c_A 42 GVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDG-TKFDSSLDRKD-KFSFDLGKGEVIKAWDIAIATMKV 119 (280)
T ss_dssp CEECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTS-CEEEESTTSSS-CEEEETTTTSSCHHHHHHHTTCCT
T ss_pred ccccccCCCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCC-CEEEecccCCC-CEEEEECCcChhHHHHHHHhcCCC
Confidence 78999 89999999999999998 999999999999998765 59999987667 999999999999999999999999
Q ss_pred CcEEEEEecCCCccCCCCCCCCCCCCCcEEEEEEEEeee
Q psy8368 84 GEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFS 122 (372)
Q Consensus 84 Ge~~~~~i~~~~~yg~~g~~~~ip~~~~~~~~iel~~~~ 122 (372)
||++.|.|||+++||..|.++.||++++++|+|+|.++.
T Consensus 120 Ge~~~v~ipp~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~ 158 (280)
T 1q1c_A 120 GEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFK 158 (280)
T ss_dssp TCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred CCEEEEEECcHHhCCCcCccCCCCCCCcEEEEEEeeeec
Confidence 999999999999999999888999999999999999988
No 26
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.86 E-value=4.2e-21 Score=168.16 Aligned_cols=108 Identities=24% Similarity=0.356 Sum_probs=100.5
Q ss_pred cCCCcEEEEEEecCCCCCCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEEEEE
Q psy8368 11 IQDGKLMKKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKSDFF 90 (372)
Q Consensus 11 ~~d~~i~k~il~~G~g~~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~~ 90 (372)
+..+|++++|+++|+|..|..||.|+|||++++.+| ++||+++.++. |++|.+| .+++||+++|.+|++|+++.|.
T Consensus 103 ~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG-~vfdss~~~g~-p~~f~lg--~vI~G~eeaL~gMk~Gek~~v~ 178 (213)
T 1fd9_A 103 VLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDG-TVFDSTEKTGK-PATFQVS--QVIPGWTEALQLMPAGSTWEIY 178 (213)
T ss_dssp ECTTSCEEEEEECCCSCCCCTTCEEEEEEEEEETTS-CEEEEHHHHCS-CEEEEGG--GSCHHHHHHHTTCCTTCEEEEE
T ss_pred ECCCccEEEEEecCCCccCCCCCEEEEEEEEEECCC-CEEeeccccCC-CEEEEcC--chhhHHHHHHcCCCCCCEEEEE
Confidence 466789999999999988999999999999998865 59999987667 9999996 8999999999999999999999
Q ss_pred ecCCCccCCCCCCCCCCCCCcEEEEEEEEeee
Q psy8368 91 ASYELCFGALGCPPRIPAKADLLFEVHLINFS 122 (372)
Q Consensus 91 i~~~~~yg~~g~~~~ip~~~~~~~~iel~~~~ 122 (372)
|||+++||..+.++.||||++++|+|+|+++.
T Consensus 179 IP~~laYG~~g~~~~Ipp~stLiF~VeLl~v~ 210 (213)
T 1fd9_A 179 VPSGLAYGPRSVGGPIGPNETLIFKIHLISVK 210 (213)
T ss_dssp ECGGGTTTTCCCSSSCCTTCCEEEEEEEEEEE
T ss_pred ECchhccCccCCCCCCCCCCeEEEEEEEEEEE
Confidence 99999999999877899999999999999987
No 27
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.85 E-value=4e-21 Score=156.10 Aligned_cols=108 Identities=29% Similarity=0.433 Sum_probs=98.7
Q ss_pred CCCcEEEEEEecCCCCCCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhcc------CCCCc
Q psy8368 12 QDGKLMKKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILS------MQKGE 85 (372)
Q Consensus 12 ~d~~i~k~il~~G~g~~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~------m~~Ge 85 (372)
..+|++++++++|+|..|..||.|+|||++++.+| ++||+++.++. |++|.+|.+.+++||+++|.+ |++|+
T Consensus 10 ~~~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG-~~fdss~~~~~-p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~Ge 87 (129)
T 1u79_A 10 SPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENG-KVFDSSYNRGK-PLTFRIGVGEVIKGWDQGILGSDGIPPMLTGG 87 (129)
T ss_dssp CTTSCEEEEEECCSSCBCCTTCEEEEEEEEECTTS-CEEEEHHHHTS-CEEEETTSSSSCHHHHHHHHCBTTBCCCBTTC
T ss_pred CCCCeEEEEEEcCCCCCCCCCCEEEEEEEEEECCC-CEEEecCCCCC-CEEEEeCCCCccHHHHHHhcccccccccCCCC
Confidence 56789999999999988999999999999998764 59999986566 999999999999999999998 99999
Q ss_pred EEEEEecCCCccCCCCCC-----CCCCCCCcEEEEEEEEee
Q psy8368 86 KSDFFASYELCFGALGCP-----PRIPAKADLLFEVHLINF 121 (372)
Q Consensus 86 ~~~~~i~~~~~yg~~g~~-----~~ip~~~~~~~~iel~~~ 121 (372)
++.|.|||+++||..+.+ +.||+|++++|+|+|+++
T Consensus 88 ~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 88 KRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp EEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred EEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 999999999999998863 479999999999999876
No 28
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.84 E-value=1.6e-20 Score=165.56 Aligned_cols=106 Identities=30% Similarity=0.521 Sum_probs=98.4
Q ss_pred CCCcEEEEEEecCCCCCCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEEEEEe
Q psy8368 12 QDGKLMKKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKSDFFA 91 (372)
Q Consensus 12 ~d~~i~k~il~~G~g~~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~~i 91 (372)
..+|++++++++|+|..|..||.|+|||++++.+| ++||+++.++. |++|.+| .+++||+++|.+|++|+++.|.|
T Consensus 119 ~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG-~vfdss~~~g~-p~~f~lg--~vI~G~eeaL~gMk~Gek~~v~I 194 (224)
T 1q6h_A 119 SSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDG-KEFDNSYTRGE-PLSFRLD--GVIPGWTEGLKNIKKGGKIKLVI 194 (224)
T ss_dssp CTTSCEEEEEECCSSCCCCTTCEEEEEEEEEETTS-CEEEEGGGGTS-CEEEEGG--GSCHHHHHHGGGSCTTCEEEEEE
T ss_pred CCCceEEEEEecccCccccCCCEEEEEEEEEeCCC-CEEeeccccCC-CEEEEcC--CcchhHHHHHcCCCCCCEEEEEE
Confidence 56789999999999999999999999999998865 59999988777 9999996 89999999999999999999999
Q ss_pred cCCCccCCCCCCCCCCCCCcEEEEEEEEeee
Q psy8368 92 SYELCFGALGCPPRIPAKADLLFEVHLINFS 122 (372)
Q Consensus 92 ~~~~~yg~~g~~~~ip~~~~~~~~iel~~~~ 122 (372)
||+++||..+.++ ||||++++|+|+|++|+
T Consensus 195 P~~laYG~~g~~~-IPp~stLiF~VeL~~ik 224 (224)
T 1q6h_A 195 PPELAYGKAGVPG-IPPNSTLVFDVELLDVK 224 (224)
T ss_dssp CGGGTTTTTCBTT-BCTTCCEEEEEEEEEEC
T ss_pred CchhhcCcCCCCC-CCCCCEEEEEEEEEEeC
Confidence 9999999998876 99999999999999874
No 29
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.84 E-value=6.3e-20 Score=148.39 Aligned_cols=115 Identities=20% Similarity=0.338 Sum_probs=108.8
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
+.+..++++|+.+|+.|+|.+|+..|++|+.+.|.. ..+++|+|.||.++|+|++|+.+|+++|+
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPEN---------------AILYSNRAACLTKLMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHhhHHHhhccHHHHHHHHHHHHH
Confidence 458899999999999999999999999999997665 68999999999999999999999999998
Q ss_pred hhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHH
Q psy8368 233 FASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKAD 289 (372)
Q Consensus 233 ~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~ 289 (372)
++|+++++|+++|.+|..+|++++|+.+|+++++++|+|. .++..|+.|.
T Consensus 76 ----~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~---~a~~~l~~~l 125 (126)
T 4gco_A 76 ----LDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNE---EAREGVRNCL 125 (126)
T ss_dssp ----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHC
T ss_pred ----hhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCH---HHHHHHHHhc
Confidence 9999999999999999999999999999999999999999 9998888764
No 30
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.83 E-value=4.9e-20 Score=153.71 Aligned_cols=137 Identities=12% Similarity=0.077 Sum_probs=119.7
Q ss_pred HHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy8368 152 LKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKAL 231 (372)
Q Consensus 152 ~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL 231 (372)
+..+..+++.|+.+++.|+|++|+..|++||++.+..+... ..........+|+|+|.|+.++|+|++|+.+|++||
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~---a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL 84 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEE---AFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKAL 84 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTS---CCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchh---hhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 56899999999999999999999999999999988743221 001122335599999999999999999999999999
Q ss_pred HhhccC-------CCCchhHH----HHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHH
Q psy8368 232 QFASHF-------ATKDVKLF----FVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKE 298 (372)
Q Consensus 232 ~~~~~~-------~p~~~ka~----~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~ 298 (372)
+ + +|++.++| |++|.++..+|++++|+.+|++|++++|++. .+...+..+++.++....+
T Consensus 85 ~----l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~---~~~~~~~~~~~~~~~~~~k 155 (159)
T 2hr2_A 85 H----YFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK---GETPGKERMMEVAIDRIAQ 155 (159)
T ss_dssp H----HHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC---SCCTTHHHHHHHHHHHHHH
T ss_pred H----hhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH---HHHHHHHHHHHHHHHHHHH
Confidence 8 7 99999999 9999999999999999999999999999999 9999999998888776543
No 31
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.81 E-value=1.8e-19 Score=140.27 Aligned_cols=95 Identities=31% Similarity=0.532 Sum_probs=87.7
Q ss_pred CCCCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEEEEEecCCCccCCCCCCCC
Q psy8368 26 GENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKSDFFASYELCFGALGCPPR 105 (372)
Q Consensus 26 g~~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~~i~~~~~yg~~g~~~~ 105 (372)
|..|..||.|+|||++++.+ |++|++++.+.. |++|.+|.+.+++||+.+|.+|++|+++.|.+|++++||..+.++.
T Consensus 3 g~~~~~gd~V~v~y~~~~~d-G~~~d~s~~~~~-p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~ 80 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKLED-GTEFDSSLPQNQ-PFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPK 80 (102)
T ss_dssp CCCCCTTCEEEEEEEEECTT-SCEEEESTTTTC-CEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBTTT
T ss_pred CCcCCCCCEEEEEEEEEECC-CCEEEeCCCCCC-CEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCC
Confidence 34589999999999999865 459999987667 9999999999999999999999999999999999999999988888
Q ss_pred CCCCCcEEEEEEEEeee
Q psy8368 106 IPAKADLLFEVHLINFS 122 (372)
Q Consensus 106 ip~~~~~~~~iel~~~~ 122 (372)
||++++++|+|+|+++.
T Consensus 81 Ip~~~~l~f~v~l~~v~ 97 (102)
T 2pbc_A 81 IPGGATLVFEVELLKIE 97 (102)
T ss_dssp BCTTCCEEEEEEEEEEG
T ss_pred cCcCCeEEEEEEEEEec
Confidence 99999999999999988
No 32
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.80 E-value=1.6e-18 Score=165.98 Aligned_cols=171 Identities=22% Similarity=0.328 Sum_probs=142.6
Q ss_pred cccccccccccccCccCchhHHHHHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhcc-CCChHHHHHHHHHHHHH
Q psy8368 128 VRSSADIESDFIDSQVEEPAFAKVLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQ-VTNYEDQMQLEEYLCRV 206 (372)
Q Consensus 128 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~-~~~~~~~~~~~~l~~~l 206 (372)
.+.+++.+.+|.... .++++.+..+..++..|+.+++.|+|.+|+..|++|+.+++..+ ....+...........+
T Consensus 199 ~~~~~~~~~~~~~~~---~~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (370)
T 1ihg_A 199 GDSHPDFPEDADVDL---KDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSC 275 (370)
T ss_dssp CCCSCSSGGGSSSCT---TCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHH
T ss_pred ccccccccccccccc---ccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHH
Confidence 445666667764432 35677889999999999999999999999999999999765531 11112222345566789
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHH
Q psy8368 207 YRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEIL 286 (372)
Q Consensus 207 ~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~ 286 (372)
++|+|.||+++++|++|+.+|+++|+ ++|+++++++++|.+|..+|++++|+.+|++|++++|++. .++..+.
T Consensus 276 ~~nla~~~~~~g~~~~A~~~~~~al~----~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~---~~~~~l~ 348 (370)
T 1ihg_A 276 VLNIGACKLKMSDWQGAVDSCLEALE----IDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDK---AIQAELL 348 (370)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHT----TCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHH
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHH----hCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH---HHHHHHH
Confidence 99999999999999999999999998 9999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc
Q psy8368 287 KADLGNQQYQKETKARCMKMFS 308 (372)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~ 308 (372)
.+...++++.++++..|++||+
T Consensus 349 ~~~~~~~~~~~a~k~~~~kmf~ 370 (370)
T 1ihg_A 349 KVKQKIKAQKDKEKAAYAKMFA 370 (370)
T ss_dssp HHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999884
No 33
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.80 E-value=3e-18 Score=148.64 Aligned_cols=167 Identities=22% Similarity=0.265 Sum_probs=132.4
Q ss_pred ccccccccCccCchhHHHHHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChH-HHHHHHHHHHHHHHHHH
Q psy8368 133 DIESDFIDSQVEEPAFAKVLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYE-DQMQLEEYLCRVYRNLM 211 (372)
Q Consensus 133 ~~~~~~~~~~~e~~~~~~~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~-~~~~~~~l~~~l~~Nla 211 (372)
..++.|.|+. ++....+..++..|+.++..|+|.+|+..|.+++.+.+..+..... .......+...++.|+|
T Consensus 22 ~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la 95 (198)
T 2fbn_A 22 AKKSIYDYTD------EEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLA 95 (198)
T ss_dssp CCCSGGGCCH------HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCchhhCCH------HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHH
Confidence 3345666654 3457889999999999999999999999999999988765433222 23334455578999999
Q ss_pred HHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHH
Q psy8368 212 VCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLG 291 (372)
Q Consensus 212 ~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~ 291 (372)
.||+++|+|++|+.+|+++++ ++|++.++++++|.+|..+|++++|+.+|+++++++|++. .++..+..+...
T Consensus 96 ~~~~~~~~~~~A~~~~~~al~----~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~l~~~~~~ 168 (198)
T 2fbn_A 96 TCYNKNKDYPKAIDHASKVLK----IDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNL---DIRNSYELCVNK 168 (198)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH----HSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH---HHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHH----hCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH---HHHHHHHHHHHH
Confidence 999999999999999999998 8999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCC
Q psy8368 292 NQQYQKETKARCMKMFSSSSS 312 (372)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~ 312 (372)
+++..+..+..++++|.....
T Consensus 169 ~~~~~~~~~~~~~~~f~~~~~ 189 (198)
T 2fbn_A 169 LKEARKKDKLTFGGMFDKGPL 189 (198)
T ss_dssp HHHHHC---------------
T ss_pred HHHHHHHHHHHHHHHhcccch
Confidence 999999999999999986554
No 34
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.79 E-value=5.5e-19 Score=167.98 Aligned_cols=114 Identities=24% Similarity=0.321 Sum_probs=103.2
Q ss_pred CccccCCCcEEEEEEecCCCC-CCCCCCEEEEEEEEEEcCCceeEeecc-cCCCcCeEEEcCCCccchHHHHHhccCCCC
Q psy8368 7 GKEQIQDGKLMKKIKEKGFGE-NPVLGAHVQVHYMYYAEANELPIDITY-LRKSIPERFQLGSSGLIPAFEYAILSMQKG 84 (372)
Q Consensus 7 ~~di~~d~~i~k~il~~G~g~-~~~~g~~V~v~y~~~~~~~~~~~dst~-~~~~~~~~~~~g~~~~~~~le~~l~~m~~G 84 (372)
..|++.|++++++|+++|.|. .|..||.|+|||++++.+| ++|+++. .+.. |++|.+|.+++++||+++|.+|++|
T Consensus 237 v~dv~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG-~~fd~~~~~~~~-p~~f~~G~g~~i~G~e~~l~gm~~G 314 (356)
T 3jxv_A 237 VTEIGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDG-TVFLKKGHDEQE-PFEFKTDEEAVIEGLDRAVLNMKKG 314 (356)
T ss_dssp EEEESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSS-CEEEEESCTTSC-CCEEETTTTSSCHHHHHHHTTCCBT
T ss_pred ccccccccceeEEeeecccccCCCCCCCEEEEEEEEEECCC-CEEeeccccCCc-CEEEEECCCccchHHHHHHhCCCCC
Confidence 367889999999999999995 4999999999999999875 4898884 4466 9999999999999999999999999
Q ss_pred cEEEEEecCCCccCCCCC--CCCCCCCCcEEEEEEEEeee
Q psy8368 85 EKSDFFASYELCFGALGC--PPRIPAKADLLFEVHLINFS 122 (372)
Q Consensus 85 e~~~~~i~~~~~yg~~g~--~~~ip~~~~~~~~iel~~~~ 122 (372)
|++.|.|||+++||..+. +..||+|++++|+|+|+++.
T Consensus 315 e~~~v~ip~~~aYG~~~~~~~~~Ip~~~~l~f~vel~~~~ 354 (356)
T 3jxv_A 315 EVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSFV 354 (356)
T ss_dssp CEEEEEECGGGTTTTSCEESSSEECTTCCEEEEEEEEEEE
T ss_pred CEEEEEEChHHccCCCCcCCCCcCCcCCeEEEEEEEEEEE
Confidence 999999999999999874 34799999999999999987
No 35
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.75 E-value=8.1e-18 Score=154.18 Aligned_cols=107 Identities=33% Similarity=0.532 Sum_probs=98.1
Q ss_pred cccc--CCCcEEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCc---cchHHHHHhccC
Q psy8368 8 KEQI--QDGKLMKKIKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSG---LIPAFEYAILSM 81 (372)
Q Consensus 8 ~di~--~d~~i~k~il~~G~g~~-~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~---~~~~le~~l~~m 81 (372)
.++. .|++++++++++|+|.. |..||.|+|||++++ + |++|+++ |+.|.+|.+. +++||+.+|.+|
T Consensus 160 ~~~~~~~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-d-G~~fd~~------~~~f~lG~g~~~~~i~G~e~~l~gm 231 (280)
T 1q1c_A 160 EDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-K-DKLFDQR------ELRFEIGEGENLDLPYGLERAIQRM 231 (280)
T ss_dssp EECCTTCSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-T-TEEEEEE------EEEEETTCGGGGTCCHHHHHHHTTC
T ss_pred cccccccccceeEEeeecccccccccCCceEEEEEEEEe-C-CEEEecC------CeEEEecCCcccccchhHHHHHhCC
Confidence 4566 89999999999999985 999999999999998 4 5699983 8999999987 599999999999
Q ss_pred CCCcEEEEEecCCCccCCCCCCC-CCCCCCcEEEEEEEEeee
Q psy8368 82 QKGEKSDFFASYELCFGALGCPP-RIPAKADLLFEVHLINFS 122 (372)
Q Consensus 82 ~~Ge~~~~~i~~~~~yg~~g~~~-~ip~~~~~~~~iel~~~~ 122 (372)
++||++.|.|||+++||..+.+. .||+|++++|+|+|++|+
T Consensus 232 k~Ge~~~v~ip~~~~yG~~~~~~~~IP~~~~l~f~V~L~~i~ 273 (280)
T 1q1c_A 232 EKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFE 273 (280)
T ss_dssp CTTCEEEEEECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEE
T ss_pred CCCcEEEEEEChhHcCCcCCCccCccCCCCeEEEEEEEEEEe
Confidence 99999999999999999988776 599999999999999998
No 36
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.75 E-value=9.4e-18 Score=159.50 Aligned_cols=115 Identities=25% Similarity=0.391 Sum_probs=103.6
Q ss_pred CCCCCCccccCCCcEEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhcc
Q psy8368 2 VPVPYGKEQIQDGKLMKKIKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILS 80 (372)
Q Consensus 2 ~~~~~~~di~~d~~i~k~il~~G~g~~-~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~ 80 (372)
+.|+...|+..|+++.|+++++|.|.. |..||.|++||++++.+|+ +|+++ . ++.|.+|++.+++||+.+|.+
T Consensus 115 ~~~~~~~di~~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~dgt-~~~~~----~-~~~f~~g~~~v~~gl~~~l~~ 188 (356)
T 3jxv_A 115 LSWTSVRDIAKDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDGT-VVSKS----E-GVEFTVKDGHLCPALAKAVKT 188 (356)
T ss_dssp ---CCEEETTSSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSC-EEEEE----E-EEEEEGGGCSSSHHHHHHHTT
T ss_pred EeeecccccccCceeEEEEEecCcccCCCCCCCEEEEEEEEEECCCC-EEecc----C-CEEEEeCCCCcchHHHHHHhh
Confidence 445556788999999999999999976 9999999999999998765 88887 2 799999999999999999999
Q ss_pred CCCCcEEEEEecCCCccCCCCCCC-----CCCCCCcEEEEEEEEeee
Q psy8368 81 MQKGEKSDFFASYELCFGALGCPP-----RIPAKADLLFEVHLINFS 122 (372)
Q Consensus 81 m~~Ge~~~~~i~~~~~yg~~g~~~-----~ip~~~~~~~~iel~~~~ 122 (372)
|++||++.++|||+++||+.|.++ .||++++++|+|+|+++.
T Consensus 189 m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~ 235 (356)
T 3jxv_A 189 MKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWK 235 (356)
T ss_dssp CCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEE
T ss_pred CCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEe
Confidence 999999999999999999998865 599999999999999987
No 37
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.74 E-value=3.8e-17 Score=131.99 Aligned_cols=115 Identities=17% Similarity=0.223 Sum_probs=101.1
Q ss_pred HHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy8368 151 VLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKA 230 (372)
Q Consensus 151 ~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~a 230 (372)
..+.+..+++.|+.+++.|+|++|+..|++||.+.|.. ..+++|+|.||+++|+|++|+.+|+++
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~---------------~~~~~nlg~~~~~~~~~~~A~~~~~~a 68 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSN---------------ITFYNNKAAVYFEEKKFAECVQFCEKA 68 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 34678899999999999999999999999999997665 689999999999999999999999999
Q ss_pred HHhhccCCCCc-------hhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Q psy8368 231 LQFASHFATKD-------VKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKA 288 (372)
Q Consensus 231 L~~~~~~~p~~-------~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~ 288 (372)
|+ ++|++ .++|+++|.+|..+|++++|+.+|++++.++|+ + ++...|..+
T Consensus 69 l~----~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~---~~~~~l~~l 125 (127)
T 4gcn_A 69 VE----VGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD-P---ELVKKVKEL 125 (127)
T ss_dssp HH----HHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC-H---HHHHHHHHH
T ss_pred HH----hCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-H---HHHHHHHHh
Confidence 98 55544 468999999999999999999999999999985 4 555555544
No 38
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.72 E-value=1.2e-16 Score=127.83 Aligned_cols=117 Identities=24% Similarity=0.307 Sum_probs=109.5
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+..++..|+.++..|+|.+|+..|.+++...+.. ..++.|+|.||.++|+|++|+.+++++++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~al~- 66 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED---------------ARGYSNRAAALAKLMSFPEAIADCNKAIE- 66 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHhcCHHHHHHHHHHHHH-
Confidence 47789999999999999999999999999997665 68999999999999999999999999998
Q ss_pred hccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhc------CCCccHHHHHHHHHHHHHHH
Q psy8368 234 ASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLA------AKDSVRAEIDKEILKADLGN 292 (372)
Q Consensus 234 ~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~------p~~~~~~~~~~~l~~~~~~~ 292 (372)
++|+++.+++++|.+|..+|++++|+.+|+++++++ |++. .+...+..+...+
T Consensus 67 ---~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~---~~~~~l~~~~~~l 125 (126)
T 3upv_A 67 ---KDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAR---EIDQLYYKASQQR 125 (126)
T ss_dssp ---HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHH---HHHHHHHHHHHHC
T ss_pred ---hCCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHH---HHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999 9999 8998888887653
No 39
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.68 E-value=6.1e-16 Score=129.02 Aligned_cols=105 Identities=13% Similarity=0.130 Sum_probs=99.5
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
+.+..+...|..++..|+|.+|+..|++++.+.|.. ..+++|+|.||..+|+|++|+.+|+++++
T Consensus 34 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~---------------~~~~~~lg~~~~~~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 34 DMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYN---------------VDYIMGLAAIYQIKEQFQQAADLYAVAFA 98 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 356788999999999999999999999999997765 68999999999999999999999999998
Q ss_pred hhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 233 FASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 233 ~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
++|+++.+|+++|.||..+|++++|+.+|++|+++.|+..
T Consensus 99 ----l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 99 ----LGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp ----HSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred ----hCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 9999999999999999999999999999999999999876
No 40
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.68 E-value=1.2e-15 Score=128.05 Aligned_cols=120 Identities=14% Similarity=0.166 Sum_probs=108.9
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..+..+...|+.++..|+|.+|+..|.+++.+.+.. ..+++|+|.||+++|+|++|+.+++++++
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 73 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPAN---------------PIYLSNRAAAYSASGQHEKAAEDAELATV 73 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 568899999999999999999999999999997665 68999999999999999999999999998
Q ss_pred hhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHH--HHHHHHHHHHHHHH
Q psy8368 233 FASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAE--IDKEILKADLGNQQ 294 (372)
Q Consensus 233 ~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~--~~~~l~~~~~~~~~ 294 (372)
++|++..+|+++|.+|..+|++++|+.+|+++++++|++. . +...+..++.++.+
T Consensus 74 ----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---~~~~~~~l~~~~~~~~~ 130 (164)
T 3sz7_A 74 ----VDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGG---SDAMKRGLETTKRKIEE 130 (164)
T ss_dssp ----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSC---CHHHHHHHHHHHHHHHH
T ss_pred ----hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCch---HHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998 6 55666666555544
No 41
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.63 E-value=8.8e-15 Score=121.26 Aligned_cols=116 Identities=17% Similarity=0.159 Sum_probs=103.6
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
.....+...|..++..|+|.+|+..|.+++...+.. ..+++++|.||..+|+|++|+.+|++++.
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYD---------------SRFFLGLGACRQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCccc---------------HHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 346778889999999999999999999999987665 67899999999999999999999999998
Q ss_pred hhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHH
Q psy8368 233 FASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADL 290 (372)
Q Consensus 233 ~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~ 290 (372)
++|+++.+++++|.+|..+|++++|+.+|+++++++|+++ .......++..
T Consensus 84 ----l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~ 134 (148)
T 2vgx_A 84 ----MDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXP---EFXELSTRVSS 134 (148)
T ss_dssp ----HSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCG---GGHHHHHHHHH
T ss_pred ----cCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC---cchHHHHHHHH
Confidence 9999999999999999999999999999999999999988 54444444433
No 42
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.62 E-value=1.3e-14 Score=118.92 Aligned_cols=119 Identities=17% Similarity=0.145 Sum_probs=106.2
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
....+...|..++..|+|.+|+..|.+++...+.. ..++.++|.||..+|+|++|+.++++++.
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~- 80 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYD---------------ARYFLGLGACRQSLGLYEQALQSYSYGAL- 80 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHHhhHHHHHHHHHHHHh-
Confidence 45677889999999999999999999999987655 67899999999999999999999999998
Q ss_pred hccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHH
Q psy8368 234 ASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQ 294 (372)
Q Consensus 234 ~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~ 294 (372)
++|+++.+++++|.+|..+|++++|+..|+++++++|+++ .......++...+..
T Consensus 81 ---~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~l~~ 135 (142)
T 2xcb_A 81 ---MDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQP---AHEALAARAGAMLEA 135 (142)
T ss_dssp ---HCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCG---GGHHHHHHHHHHHHH
T ss_pred ---cCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCc---chHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998 655555555554443
No 43
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.62 E-value=7.1e-15 Score=118.62 Aligned_cols=120 Identities=23% Similarity=0.300 Sum_probs=110.1
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|..++..|+|.+|+..|.+++...+.. ..+++++|.||+.+|+|++|+.+++++++
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~al~-- 71 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV---------------AVYYTNRALCYLKMQQPEQALADCRRALE-- 71 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCc---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHH--
Confidence 6788999999999999999999999999987654 57899999999999999999999999998
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC-----CccHHHHHHHHHHHHHHHHHHH
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAK-----DSVRAEIDKEILKADLGNQQYQ 296 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~-----~~~~~~~~~~l~~~~~~~~~~~ 296 (372)
++|+++.+++++|.+|..+|++++|+..|.++++++|+ +. .+...+..+........
T Consensus 72 --~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~---~~~~~l~~~~~~~~~~~ 133 (137)
T 3q49_B 72 --LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGD---DIPSALRIAKKKRWNSI 133 (137)
T ss_dssp --HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTT---HHHHHHHHHHHHHHHHH
T ss_pred --hCchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHH---HHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999998 77 88888888877665443
No 44
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.60 E-value=6.7e-15 Score=122.17 Aligned_cols=115 Identities=12% Similarity=0.033 Sum_probs=96.7
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
....+...|+.|++.|+|++|+..|.+++.+.|.. ..+++++|.||.++|++++|+.+++++++
T Consensus 30 ~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~~~~~~A~~~~~~al~- 93 (150)
T 4ga2_A 30 KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERD---------------PKAHRFLGLLYELEENTDKAVECYRRSVE- 93 (150)
T ss_dssp HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCchHHHHHHHHHHHH-
Confidence 45566788999999999999999999999887665 67888999999999999999999999997
Q ss_pred hccCCCCchhHHHHHHHHHHhcCCHHHHHHH-HHHHHhhcCCCccHHHHHHHHHHHHH
Q psy8368 234 ASHFATKDVKLFFVWGKALIGLQEWTSAIKH-LKTARKLAAKDSVRAEIDKEILKADL 290 (372)
Q Consensus 234 ~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~-~~~al~l~p~~~~~~~~~~~l~~~~~ 290 (372)
++|+++.+++++|.+|..+|++++|... +++|++++|+++ .+......+..
T Consensus 94 ---~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~---~~~~l~~~ll~ 145 (150)
T 4ga2_A 94 ---LNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSP---AVYKLKEQLLD 145 (150)
T ss_dssp ---HCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCH---HHHHHHHHHHH
T ss_pred ---hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCH---HHHHHHHHHHH
Confidence 8899999999999999999998876665 588999999998 77776666554
No 45
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.60 E-value=1.7e-14 Score=149.03 Aligned_cols=136 Identities=14% Similarity=0.145 Sum_probs=120.5
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
+.+..+.+.|+.+..+|+|++|+..|++||++.+.. ..+++|+|.+|.++|+|++|+.++++||+
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~---------------~~a~~nLg~~l~~~g~~~eA~~~~~~Al~ 71 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPEF---------------AAAHSNLASVLQQQGKLQEALMHYKEAIR 71 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 457889999999999999999999999999997665 68899999999999999999999999998
Q ss_pred hhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q psy8368 233 FASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSSSS 311 (372)
Q Consensus 233 ~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (372)
++|+++.+|+++|.+|..+|++++|+.+|++|++++|++. .++..++.+....+++.++ ...|++.+....
T Consensus 72 ----l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~---~a~~~Lg~~~~~~g~~~eA-i~~~~~Al~l~P 142 (723)
T 4gyw_A 72 ----ISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA---DAHSNLASIHKDSGNIPEA-IASYRTALKLKP 142 (723)
T ss_dssp ----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHTTCHHHH-HHHHHHHHHHCS
T ss_pred ----hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHcCCHHHH-HHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999 9999999998888777543 344555444433
No 46
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.59 E-value=2.2e-15 Score=125.16 Aligned_cols=128 Identities=10% Similarity=0.023 Sum_probs=107.1
Q ss_pred hhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCC
Q psy8368 161 SGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATK 240 (372)
Q Consensus 161 ~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~ 240 (372)
.|+.+..+|++++|+..|++++...+.. ...++++|.+|+++|+|++|+.+++++++ ++|+
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~---------------~~~~~~la~~y~~~~~~~~A~~~~~~al~----~~p~ 63 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQK---------------SIKGFYFAKLYYEAKEYDLAKKYICTYIN----VQER 63 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHH---------------HTTHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTT
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCccc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCC
Confidence 5788889999999999999999876543 46788999999999999999999999998 9999
Q ss_pred chhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q psy8368 241 DVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSSS 310 (372)
Q Consensus 241 ~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (372)
++.+|+.+|.+|..+|++++|+.+|+++++++|++. .+...++.+....+++.++.+..+.+.....
T Consensus 64 ~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~la~~~~~~~~~~~aa~~~~~~al~l~ 130 (150)
T 4ga2_A 64 DPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQK---DLVLKIAELLCKNDVTDGRAKYWVERAAKLF 130 (150)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHHCSSSSHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHcCChHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999 9999999887776655444444444444433
No 47
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.59 E-value=6.5e-14 Score=122.48 Aligned_cols=132 Identities=15% Similarity=0.119 Sum_probs=107.0
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChH-HHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYE-DQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~-~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
+..+...|..++..|+|.+|+..|.+++...|..+...-. ...........+++++|.||.++|+|++|+.+++++++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~- 82 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ- 82 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-
Confidence 5677889999999999999999999999987654100000 00000011123444599999999999999999999998
Q ss_pred hccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHH
Q psy8368 234 ASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQ 293 (372)
Q Consensus 234 ~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~ 293 (372)
++|+++.+++++|.+|..+|++++|+.+|+++++++|++. .++..++.+.....
T Consensus 83 ---~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~---~a~~~lg~~~~~~~ 136 (208)
T 3urz_A 83 ---KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNL---AANIFLGNYYYLTA 136 (208)
T ss_dssp ---HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHHH
T ss_pred ---HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH---HHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999 99999998875544
No 48
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.57 E-value=7.7e-14 Score=108.44 Aligned_cols=115 Identities=20% Similarity=0.260 Sum_probs=106.4
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+..+...|..++..|+|.+|+..|.+++...+.. ..++.++|.||..+|+|++|+.+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~- 66 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHN---------------HVLYSNRSAAYAKKGDYQKAYEDGCKTVD- 66 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH-
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc---------------HHHHHHHHHHHHhhccHHHHHHHHHHHHH-
Confidence 46788999999999999999999999999986654 57899999999999999999999999998
Q ss_pred hccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHH
Q psy8368 234 ASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADL 290 (372)
Q Consensus 234 ~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~ 290 (372)
.+|++..+++.+|.++..+|++++|+..|+++++++|++. .++..+..+.+
T Consensus 67 ---~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~---~~~~~l~~~~~ 117 (118)
T 1elw_A 67 ---LKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNP---QLKEGLQNMEA 117 (118)
T ss_dssp ---HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCH---HHHHHHHHHHH
T ss_pred ---hCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCH---HHHHHHHHhhc
Confidence 8999999999999999999999999999999999999999 88888777653
No 49
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.55 E-value=4.7e-13 Score=110.93 Aligned_cols=118 Identities=21% Similarity=0.359 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy8368 150 KVLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASK 229 (372)
Q Consensus 150 ~~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~ 229 (372)
...+.+..+...|..++..|+|..|+..|.+++...+.. ..++.++|.|+..+|+|++|+.++.+
T Consensus 8 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~ 72 (166)
T 1a17_A 8 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN---------------AIYYGNRSLAYLRTECYGYALGDATR 72 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 357889999999999999999999999999999986554 57899999999999999999999999
Q ss_pred HHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHH
Q psy8368 230 ALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKAD 289 (372)
Q Consensus 230 aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~ 289 (372)
+++ .+|.+..+++++|.+|..+|++++|+..|+++++++|++. .+...+..+.
T Consensus 73 a~~----~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~---~~~~~~~~~~ 125 (166)
T 1a17_A 73 AIE----LDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDK---DAKMKYQECN 125 (166)
T ss_dssp HHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH---HHHHHHHHHH
T ss_pred HHH----hCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCH---HHHHHHHHHH
Confidence 998 8999999999999999999999999999999999999998 7776666653
No 50
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.54 E-value=1.2e-14 Score=114.58 Aligned_cols=87 Identities=14% Similarity=0.214 Sum_probs=73.3
Q ss_pred CCCCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEEEEEecCCCccCCCCCCCC
Q psy8368 26 GENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKSDFFASYELCFGALGCPPR 105 (372)
Q Consensus 26 g~~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~~i~~~~~yg~~g~~~~ 105 (372)
+..+..||.|+|+|++++ + |++||++. .. |+.|.+|.+.++|||+++|.+|++|++..|.||+...||..+.
T Consensus 27 ~~~~~~gD~V~v~Y~g~~-d-G~~fdss~--~~-p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~~--- 98 (113)
T 1hxv_A 27 DKKLANGDIAIIDFTGIV-D-NKKLASAS--AQ-NYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKEL--- 98 (113)
T ss_dssp --CCCSSEEEEEEEEEEE-T-TEECSTTC--CS-EEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSGG---
T ss_pred CCCCCCCCEEEEEEEEEE-C-CEEcccCC--cc-CEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCCC---
Confidence 446899999999999998 5 56999985 45 9999999999999999999999999999999973333887653
Q ss_pred CCCCCcEEEEEEEEeee
Q psy8368 106 IPAKADLLFEVHLINFS 122 (372)
Q Consensus 106 ip~~~~~~~~iel~~~~ 122 (372)
++++++|+|+|++++
T Consensus 99 --~g~~l~F~V~l~~Vk 113 (113)
T 1hxv_A 99 --QSKPVTFEVVLKAIK 113 (113)
T ss_dssp --GSCCCEEEEEECCBC
T ss_pred --CCCEEEEEEEEEEEC
Confidence 578999999998763
No 51
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.52 E-value=1.9e-13 Score=108.92 Aligned_cols=116 Identities=18% Similarity=0.300 Sum_probs=107.2
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
....+...|..++..|+|.+|+..|.+++...+.. ..++.++|.||..+++|++|+.+++++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~a~~- 78 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKD---------------AKLYSNRAACYTKLLEFQLALKDCEECIQ- 78 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC---------------HHHHHHHHHHHTTTTCHHHHHHHHHHHHH-
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHH-
Confidence 47888999999999999999999999999886544 57899999999999999999999999998
Q ss_pred hccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHH
Q psy8368 234 ASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLG 291 (372)
Q Consensus 234 ~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~ 291 (372)
.+|.+..+++++|.+|..+|++++|+..|+++++++|.+. .+...+..+...
T Consensus 79 ---~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~---~~~~~l~~~~~~ 130 (133)
T 2lni_A 79 ---LEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCK---EAADGYQRCMMA 130 (133)
T ss_dssp ---HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGT---HHHHHHHHHHHH
T ss_pred ---hCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCch---HHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999 888888877654
No 52
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.51 E-value=3e-13 Score=114.90 Aligned_cols=121 Identities=15% Similarity=0.107 Sum_probs=93.6
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+..+.+.|+.++.+|+|++|+..|+++++..|.. ..++.++|.||.++|++++|+..+.+++.
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~~~~~~a~~~~~~~~~- 67 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNN---------------VETLLKLGKTYMDIGLPNDAIESLKKFVV- 67 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHh-
Confidence 36778899999999999999999999999987665 56677777777777777777777777776
Q ss_pred hccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHH
Q psy8368 234 ASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQ 296 (372)
Q Consensus 234 ~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~ 296 (372)
.+|++..+++.+|.++...++++.|+..+.++++++|++. .+...++.+....+++.
T Consensus 68 ---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~---~~~~~lg~~~~~~g~~~ 124 (184)
T 3vtx_A 68 ---LDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYA---DAYYKLGLVYDSMGEHD 124 (184)
T ss_dssp ---HCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHTTCHH
T ss_pred ---cCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccch---HHHHHHHHHHHHhCCch
Confidence 6677777777777777777777777777777777777777 67767766666665554
No 53
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.51 E-value=5.5e-13 Score=105.39 Aligned_cols=120 Identities=20% Similarity=0.226 Sum_probs=109.8
Q ss_pred HHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy8368 152 LKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKAL 231 (372)
Q Consensus 152 ~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL 231 (372)
...+..+...|..++..|+|..|+..|.+++...+.. ..++.++|.++..+|+|++|+.++.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~ 73 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPAN---------------AVYFCNRAAAYSKLGNYAGAVQDCERAI 73 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCC---------------HHHHHHHHHHHHHhhchHHHHHHHHHHH
Confidence 3567889999999999999999999999999986544 5789999999999999999999999999
Q ss_pred HhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHH
Q psy8368 232 QFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQ 293 (372)
Q Consensus 232 ~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~ 293 (372)
+ .+|++..+++.+|.+|..+|++++|+..|+++++++|++. .+...+..+...++
T Consensus 74 ~----~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~---~~~~~l~~~~~~~~ 128 (131)
T 2vyi_A 74 C----IDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNE---TYKSNLKIAELKLR 128 (131)
T ss_dssp H----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH---HHHHHHHHHHHHHT
T ss_pred h----cCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccch---HHHHHHHHHHHHHh
Confidence 8 8999999999999999999999999999999999999999 88888888776544
No 54
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.51 E-value=3.9e-13 Score=106.44 Aligned_cols=119 Identities=16% Similarity=0.225 Sum_probs=106.3
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+..+...|..++..|+|..|+..|.+++...+.. ..+++++|.+|..+|+|++|+.++.++++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~- 66 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTN---------------MTYITNQAAVYFEKGDYNKCRELCEKAIE- 66 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHh-
Confidence 46788999999999999999999999999986554 57899999999999999999999999998
Q ss_pred hccCCCCc-------hhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHH
Q psy8368 234 ASHFATKD-------VKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQY 295 (372)
Q Consensus 234 ~~~~~p~~-------~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~ 295 (372)
..|.+ ..+++++|.+|..+|++++|+..|++++++.| +. .+...+..+...++..
T Consensus 67 ---~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~---~~~~~l~~~~~~~~~~ 128 (131)
T 1elr_A 67 ---VGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TP---DVLKKCQQAEKILKEQ 128 (131)
T ss_dssp ---HHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CH---HHHHHHHHHHHHHHHC
T ss_pred ---hccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CH---HHHHHHHHHHHHHHHh
Confidence 55555 88999999999999999999999999999999 57 7888888887766543
No 55
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.49 E-value=1.4e-13 Score=109.87 Aligned_cols=101 Identities=12% Similarity=0.076 Sum_probs=90.1
Q ss_pred HHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhcc
Q psy8368 157 ELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASH 236 (372)
Q Consensus 157 ~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~ 236 (372)
.+...|..++..|++.+|+..|.+++...+.. ..++.++|.|+..+|++++|+..++++++
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~---------------~~a~~~lg~~~~~~g~~~~A~~~~~~al~---- 79 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPER---------------EEAWRSLGLTQAENEKDGLAIIALNHARM---- 79 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----
Confidence 45778999999999999999999999997765 68899999999999999999999999998
Q ss_pred CCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 237 FATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 237 ~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
++|++..+++.+|.+|..+|++++|+..|+++++++|++.
T Consensus 80 l~P~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 80 LDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCC
Confidence 9999999999999999999999999999999999999876
No 56
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.49 E-value=1e-12 Score=115.73 Aligned_cols=131 Identities=18% Similarity=0.163 Sum_probs=110.2
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhh-hccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLI-NTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~-~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
..+...|..++..|+|.+|+..|.+++...+ .. ..+++++|.||..+|+|++|+.+++++++
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~al~-- 70 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQD---------------SVTAYNCGVCADNIKKYKEAADYFDIAIK-- 70 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCC---------------cHHHHHHHHHHHHhhcHHHHHHHHHHHHH--
Confidence 6788999999999999999999999999875 33 46788899999999999999999999998
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEI-------DKEILKADLGNQQYQKETKARCMKMF 307 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (372)
.+|++..+++.+|.+|..+|++++|+..|+++++++|++. .+ ...++.+....+++. .....|.+.+
T Consensus 71 --~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~~g~~~~~~~~~~-~A~~~~~~al 144 (228)
T 4i17_A 71 --KNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNA---TIEKLYAIYYLKEGQKFQQAGNIE-KAEENYKHAT 144 (228)
T ss_dssp --TTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH---HHHHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHT
T ss_pred --hCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH---HHHHHHHHHHHHHhHHHHHhccHH-HHHHHHHHHH
Confidence 9999999999999999999999999999999999999998 55 444444544444443 3345555555
Q ss_pred cC
Q psy8368 308 SS 309 (372)
Q Consensus 308 ~~ 309 (372)
..
T Consensus 145 ~~ 146 (228)
T 4i17_A 145 DV 146 (228)
T ss_dssp TS
T ss_pred hc
Confidence 54
No 57
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=4.9e-13 Score=108.63 Aligned_cols=117 Identities=21% Similarity=0.239 Sum_probs=105.4
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|..++..|+|.+|+..|.+++...+.. .....++.++|.||..+++|++|+.+|+++++
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~------------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~-- 93 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDATP------------QDQAVLHRNRAACHLKLEDYDKAETEASKAIE-- 93 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCH------------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccc------------hHHHHHHHHHHHHHHHHccHHHHHHHHHHHHh--
Confidence 6778899999999999999999999999875431 12357899999999999999999999999998
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHH
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADL 290 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~ 290 (372)
.+|++..+++++|.+|..+|++++|+..|+++++++|++. .++..+..+..
T Consensus 94 --~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~l~~~~~ 144 (148)
T 2dba_A 94 --KDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNK---VFQEALRNISG 144 (148)
T ss_dssp --HTSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCH---HHHHHHHHHHC
T ss_pred --hCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcH---HHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999 88887777653
No 58
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.48 E-value=3.2e-13 Score=139.60 Aligned_cols=121 Identities=12% Similarity=0.088 Sum_probs=113.0
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+.+.|+.+.+.|++++|+..|++|+++.+.. ..+++|+|.+|.++|+|++|+.++++||+
T Consensus 43 ~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~---------------~~a~~nLg~~l~~~g~~~~A~~~~~kAl~-- 105 (723)
T 4gyw_A 43 AAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF---------------ADAYSNMGNTLKEMQDVQGALQCYTRAIQ-- 105 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--
Confidence 5778899999999999999999999999997665 68999999999999999999999999998
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHH
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQK 297 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~ 297 (372)
++|++..+|+++|.+|..+|++++|+.+|++|++++|++. .++..++.+...+.++.+
T Consensus 106 --l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~---~a~~~L~~~l~~~g~~~~ 163 (723)
T 4gyw_A 106 --INPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFP---DAYCNLAHCLQIVCDWTD 163 (723)
T ss_dssp --HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH---HHHHHHHHHHHHTTCCTT
T ss_pred --hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh---HHHhhhhhHHHhcccHHH
Confidence 9999999999999999999999999999999999999999 999999998877665543
No 59
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.47 E-value=4.8e-13 Score=117.73 Aligned_cols=121 Identities=12% Similarity=-0.001 Sum_probs=100.9
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|..++..|++.+|+..|++++...|.. ..+++++|.++.++|++++|+..++++++
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~g~~~~A~~~~~~al~-- 67 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALKENPQD---------------PEALYWLARTQLKLGLVNPALENGKTLVA-- 67 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--
Confidence 3456778889999999999999999999886655 57788888888888888888888888887
Q ss_pred ccCCCCchhHHHHHHHHHHhc-----------CCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHH
Q psy8368 235 SHFATKDVKLFFVWGKALIGL-----------QEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQK 297 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l-----------~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~ 297 (372)
++|+++.+++.+|.+|..+ |++++|+..|+++++++|++. .++..++.+....+++.+
T Consensus 68 --~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~---~~~~~lg~~~~~~g~~~~ 136 (217)
T 2pl2_A 68 --RTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYA---PLHLQRGLVYALLGERDK 136 (217)
T ss_dssp --HCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHTTCHHH
T ss_pred --hCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccH---HHHHHHHHHHHHcCChHH
Confidence 8888888888888888888 888888888888888888888 888888887777666644
No 60
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.47 E-value=1.1e-12 Score=104.48 Aligned_cols=115 Identities=11% Similarity=0.030 Sum_probs=99.7
Q ss_pred HHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhcc
Q psy8368 157 ELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASH 236 (372)
Q Consensus 157 ~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~ 236 (372)
.+...|..++..|+|.+|+..|.+++...+..+ ....+++++|.||+++|+|++|+.+++++++
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~------------~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~---- 67 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGV------------YTPNALYWLGESYYATRNFQLAEAQFRDLVS---- 67 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSST------------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCc------------ccHHHHHHHHHHHHHhccHHHHHHHHHHHHH----
Confidence 456789999999999999999999999876542 1136889999999999999999999999998
Q ss_pred CCCCc---hhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHH
Q psy8368 237 FATKD---VKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADL 290 (372)
Q Consensus 237 ~~p~~---~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~ 290 (372)
.+|++ ..+++++|.+|..+|++++|+..|+++++..|++. .+......+..
T Consensus 68 ~~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~---~~~~a~~~l~~ 121 (129)
T 2xev_A 68 RYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSD---AARVAQERLQS 121 (129)
T ss_dssp HCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSH---HHHHHHHHHHH
T ss_pred HCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCh---HHHHHHHHHHH
Confidence 88998 88999999999999999999999999999999998 55555544443
No 61
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.47 E-value=8.4e-13 Score=121.10 Aligned_cols=102 Identities=25% Similarity=0.357 Sum_probs=96.8
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..++..|+.++..|+|.+|+..|.+|+...+.. ..+++|+|.||.++|+|++|+.+++++++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~al~-- 66 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV---------------AVYYTNRALCYLKMQQPEQALADCRRALE-- 66 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHH--
Confidence 5678899999999999999999999999987654 68899999999999999999999999997
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCC
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKD 275 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~ 275 (372)
++|++.++++++|.+|..+|++++|+.+|+++++++|++
T Consensus 67 --~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 67 --LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp --SCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred --hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999999999999999999977
No 62
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.46 E-value=3.8e-13 Score=118.44 Aligned_cols=70 Identities=26% Similarity=0.348 Sum_probs=63.8
Q ss_pred CCCCCEEEEEEEEEEcCCceeEeecccC-------------CCcCeEEEcCCCccchHHHHHhccCCCCcEEEEEecCCC
Q psy8368 29 PVLGAHVQVHYMYYAEANELPIDITYLR-------------KSIPERFQLGSSGLIPAFEYAILSMQKGEKSDFFASYEL 95 (372)
Q Consensus 29 ~~~g~~V~v~y~~~~~~~~~~~dst~~~-------------~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~~i~~~~ 95 (372)
++.||.|+|||++++ + |++||||+.. .. |++|.+|.+.++|||+.+|.+|++|++..|.|||++
T Consensus 2 i~~Gd~V~v~Y~g~l-d-G~vfDss~~~~A~e~gi~~~~~~~~-P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~ 78 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-D-GKLFDTTNEELAKKEGIYNPAMIYG-PVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEK 78 (231)
T ss_dssp CCTTCEEEEEEEEEE-T-TEEEEESCHHHHHHTTCCCTTSCCS-CEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGG
T ss_pred CCCCCEEEEEEEEEE-C-CEEEEeccchhcccccccccccCCC-CEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHH
Confidence 578999999999999 5 5699999752 25 999999999999999999999999999999999999
Q ss_pred ccCCCC
Q psy8368 96 CFGALG 101 (372)
Q Consensus 96 ~yg~~g 101 (372)
|||..+
T Consensus 79 AYGe~~ 84 (231)
T 3prb_A 79 AFGKRD 84 (231)
T ss_dssp TTCCCC
T ss_pred hcCCCC
Confidence 999865
No 63
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.45 E-value=8.2e-13 Score=111.50 Aligned_cols=70 Identities=20% Similarity=0.274 Sum_probs=63.9
Q ss_pred CCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEEEEEecCCCccCCCC
Q psy8368 29 PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKSDFFASYELCFGALG 101 (372)
Q Consensus 29 ~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~~i~~~~~yg~~g 101 (372)
++.||.|+|+|++++.+ |++|||++.+ . |++|.+|.+.++|||+.+|.+|++|++..|.|||+.+||..+
T Consensus 3 i~~gd~V~v~Y~g~~~d-G~~fdss~~~-~-P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~ 72 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTED-GVLVDESPVS-A-PLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (171)
T ss_dssp CCTTEEEEEEEEEEETT-SCEEEECCSS-S-CEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC
T ss_pred CCCCCEEEEEEEEEECC-CCEEeeccCC-c-CEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC
Confidence 67899999999999875 4699999754 4 999999999999999999999999999999999999999874
No 64
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.44 E-value=3.8e-13 Score=111.81 Aligned_cols=105 Identities=10% Similarity=-0.001 Sum_probs=93.3
Q ss_pred hccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCH----------HHHHHHHHHHHHhhcc
Q psy8368 167 NDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQY----------KLTCDCASKALQFASH 236 (372)
Q Consensus 167 ~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y----------~~Ai~~~~~aL~~~~~ 236 (372)
+.++|++|+..|.+++.+.|.. ...++|+|.|+..++++ ++|+..|++||+
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~---------------aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~---- 74 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLD---------------ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALL---- 74 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH----
T ss_pred HHhHHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHH----
Confidence 4578999999999999998776 68999999999999875 599999999998
Q ss_pred CCCCchhHHHHHHHHHHhcC-----------CHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHH
Q psy8368 237 FATKDVKLFFVWGKALIGLQ-----------EWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQ 293 (372)
Q Consensus 237 ~~p~~~ka~~r~a~a~~~l~-----------~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~ 293 (372)
++|++..||+++|.+|..+| ++++|+.+|++|++++|++. ..++.+..+.+...
T Consensus 75 ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~---~y~~al~~~~ka~e 139 (158)
T 1zu2_A 75 IDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT---HYLKSLEMTAKAPQ 139 (158)
T ss_dssp HCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHTHHH
T ss_pred hCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHhCHh
Confidence 99999999999999999885 89999999999999999999 77777776655433
No 65
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.44 E-value=2.8e-13 Score=112.64 Aligned_cols=71 Identities=25% Similarity=0.329 Sum_probs=64.5
Q ss_pred CCCCCEEEEEEEEEEcCCceeEeecccC-------------CCcCeEEEcCCCccchHHHHHhccCCCCcEEEEEecCCC
Q psy8368 29 PVLGAHVQVHYMYYAEANELPIDITYLR-------------KSIPERFQLGSSGLIPAFEYAILSMQKGEKSDFFASYEL 95 (372)
Q Consensus 29 ~~~g~~V~v~y~~~~~~~~~~~dst~~~-------------~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~~i~~~~ 95 (372)
++.||.|+|||++++ + |++||||+.. .. |++|.+|.+.++|||+++|.+|++|+++.|.|||++
T Consensus 2 i~~Gd~V~v~Y~g~l-d-G~vfDss~~~~a~~~g~~~~~~~~~-P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~ 78 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-D-GKLFDTTNEELAKKEGIYNPAMIYG-PVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEK 78 (157)
T ss_dssp CCTTCEEEEEEEEEE-T-TEEEEESCHHHHHHHTCCCTTSCCS-CEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGG
T ss_pred CCCCCEEEEEEEEEE-C-CEEEEeccccccccccccccccCCC-CEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHH
Confidence 578999999999999 5 5699999753 25 999999999999999999999999999999999999
Q ss_pred ccCCCCC
Q psy8368 96 CFGALGC 102 (372)
Q Consensus 96 ~yg~~g~ 102 (372)
+||..+.
T Consensus 79 aYG~~~~ 85 (157)
T 3pr9_A 79 AFGKRDP 85 (157)
T ss_dssp TTCCCCG
T ss_pred hcCCCCh
Confidence 9998764
No 66
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.43 E-value=8e-13 Score=126.81 Aligned_cols=120 Identities=10% Similarity=0.005 Sum_probs=75.5
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccC-HHHHHHHHHHHHH
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQ-YKLTCDCASKALQ 232 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~-y~~Ai~~~~~aL~ 232 (372)
.+..+...|..+...|++.+|+..|.++|.+.+.. ..+++++|.++..+|+ |++|+.+|+++|+
T Consensus 96 ~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~---------------~~a~~~~g~~l~~~g~d~~eAl~~~~~al~ 160 (382)
T 2h6f_A 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIELNAAN---------------YTVWHFRRVLLKSLQKDLHEEMNYITAIIE 160 (382)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccC---------------HHHHHHHHHHHHHcccCHHHHHHHHHHHHH
Confidence 35556666677777777777777777777665544 4556666666666664 6666666666665
Q ss_pred hhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHH
Q psy8368 233 FASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQY 295 (372)
Q Consensus 233 ~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~ 295 (372)
++|++..+|+++|.+|..+|++++|+.+|++|++++|+|. .++..++.+...++.+
T Consensus 161 ----l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~---~a~~~lg~~~~~~g~~ 216 (382)
T 2h6f_A 161 ----EQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNY---HAWQHRQWVIQEFKLW 216 (382)
T ss_dssp ----HCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCH---HHHHHHHHHHHHHTCC
T ss_pred ----HCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCH---HHHHHHHHHHHHcCCh
Confidence 6666666666666666666666666666666666666666 6666555555544433
No 67
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.43 E-value=3e-13 Score=113.55 Aligned_cols=72 Identities=22% Similarity=0.357 Sum_probs=66.4
Q ss_pred CCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEEEEEecCCCccCCCC
Q psy8368 28 NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKSDFFASYELCFGALG 101 (372)
Q Consensus 28 ~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~~i~~~~~yg~~g 101 (372)
.+..||.|+|||++++.+| ++||+++.++. |++|.+|.+.++|||+.+|.+|++|+++.|.|||+++||..+
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG-~vfDss~~~~~-P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~ 95 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDG-TTAESTRNNGK-PALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPS 95 (169)
T ss_dssp SCCTTCEEEEEEEEEETTS-CEEEEHHHHTS-CEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCC
T ss_pred cCCCCCEEEEEEEEEECCC-CEEEecCCCCC-CEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC
Confidence 4789999999999998765 59999987666 999999999999999999999999999999999999999865
No 68
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.43 E-value=3.1e-12 Score=112.50 Aligned_cols=134 Identities=16% Similarity=0.071 Sum_probs=118.1
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHc-----------cCHHHH
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNN-----------KQYKLT 223 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl-----------~~y~~A 223 (372)
+..+...|..++..|++.+|+..|++++...|.. ..++.++|.+|.++ |++++|
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~---------------~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A 103 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVARTPRY---------------LGGYMVLSEAYVALYRQAEDRERGKGYLEQA 103 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHhhhhhhhhcccccCHHHH
Confidence 5678899999999999999999999999997665 67899999999999 999999
Q ss_pred HHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8368 224 CDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARC 303 (372)
Q Consensus 224 i~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 303 (372)
+..++++++ ++|++..+++.+|.+|..+|++++|+..|+++++++ ++. .++..++.+....+++.+. ...|
T Consensus 104 ~~~~~~al~----~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~---~~~~~la~~~~~~g~~~~A-~~~~ 174 (217)
T 2pl2_A 104 LSVLKDAER----VNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTP---EIRSALAELYLSMGRLDEA-LAQY 174 (217)
T ss_dssp HHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCH---HHHHHHHHHHHHHTCHHHH-HHHH
T ss_pred HHHHHHHHH----hCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cch---HHHHHHHHHHHHcCCHHHH-HHHH
Confidence 999999998 999999999999999999999999999999999999 888 9999999998887776543 4555
Q ss_pred HhhccCCCC
Q psy8368 304 MKMFSSSSS 312 (372)
Q Consensus 304 ~~~~~~~~~ 312 (372)
.+.+...+.
T Consensus 175 ~~al~~~P~ 183 (217)
T 2pl2_A 175 AKALEQAPK 183 (217)
T ss_dssp HHHHHHSTT
T ss_pred HHHHHhCCC
Confidence 555544433
No 69
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.42 E-value=8.6e-12 Score=97.54 Aligned_cols=114 Identities=19% Similarity=0.304 Sum_probs=104.1
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|..++..|++..|+..|.+++...+.. ..++.++|.++...|+|++|+..++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~-- 71 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALE-- 71 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc---------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHH--
Confidence 5677889999999999999999999999886543 46789999999999999999999999998
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHH
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADL 290 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~ 290 (372)
.+|.+..+++.+|.+|..+|++++|+..|+++++++|++. .+...+..+..
T Consensus 72 --~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~---~~~~~l~~~~~ 122 (125)
T 1na0_A 72 --LDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA---EAKQNLGNAKQ 122 (125)
T ss_dssp --HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHH
T ss_pred --hCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH---HHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999 88888777654
No 70
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.42 E-value=1.4e-12 Score=125.12 Aligned_cols=115 Identities=5% Similarity=-0.025 Sum_probs=109.1
Q ss_pred HHHHHHhhHHHHhccC-HHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 155 AQELGASGKNAFNDKN-IVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~-~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
...+..+|..+...|+ |.+|+..|.+|+.+.+.. ..+|+|+|.++..+|+|++|+.+|+++|+
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~---------------~~a~~~~g~~~~~~g~~~eAl~~~~kal~- 194 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKN---------------YQVWHHRRVLVEWLRDPSQELEFIADILN- 194 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCCTTHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHH-
Confidence 5778899999999997 999999999999998776 68999999999999999999999999998
Q ss_pred hccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHH
Q psy8368 234 ASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLG 291 (372)
Q Consensus 234 ~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~ 291 (372)
++|++..+|+++|.++..+|++++|+.+|+++++++|++. .++..++.+...
T Consensus 195 ---ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~---~a~~~lg~~l~~ 246 (382)
T 2h6f_A 195 ---QDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNN---SVWNQRYFVISN 246 (382)
T ss_dssp ---HCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCH---HHHHHHHHHHHH
T ss_pred ---hCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 999999988776
No 71
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.41 E-value=6.3e-13 Score=104.95 Aligned_cols=95 Identities=14% Similarity=0.131 Sum_probs=83.0
Q ss_pred hccCHHHHHHHHHHHHHh---hhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchh
Q psy8368 167 NDKNIVSAVRRYRDAVKL---LINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVK 243 (372)
Q Consensus 167 ~~g~~~~A~~~y~~al~~---~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~k 243 (372)
..|+|.+|+..|.+++.. .+.. ..++.++|.||..+|+|++|+.+++++++ ++|++..
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~---------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~----~~p~~~~ 62 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDL---------------AECYLGLGSTFRTLGEYRKAEAVLANGVK----QFPNHQA 62 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHH---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccH---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCchH
Confidence 368999999999999987 2332 67899999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHH
Q psy8368 244 LFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDK 283 (372)
Q Consensus 244 a~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~ 283 (372)
+++++|.+|..+|++++|+..|++++.+.|+++ .+..
T Consensus 63 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~---~~~~ 99 (117)
T 3k9i_A 63 LRVFYAMVLYNLGRYEQGVELLLKIIAETSDDE---TIQS 99 (117)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCH---HHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH---HHHH
Confidence 999999999999999999999999999999998 6543
No 72
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.40 E-value=2.2e-12 Score=103.67 Aligned_cols=101 Identities=14% Similarity=0.103 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDK 283 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~ 283 (372)
...+.|+|.+|++.|+|++|+.+++++|+ ++|.++.+|+++|.+|..+|++++|+.+|++|++++|++. .++.
T Consensus 13 a~~~~~~G~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~---~a~~ 85 (126)
T 4gco_A 13 AQEEKNKGNEYFKKGDYPTAMRHYNEAVK----RDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFI---KGYI 85 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhh---HHHH
Confidence 67889999999999999999999999998 9999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q psy8368 284 EILKADLGNQQYQKETKARCMKMFSSSSS 312 (372)
Q Consensus 284 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (372)
.++.+...++++.+ ....|.+.+...+.
T Consensus 86 ~lg~~~~~~~~~~~-A~~~~~~al~l~P~ 113 (126)
T 4gco_A 86 RKAACLVAMREWSK-AQRAYEDALQVDPS 113 (126)
T ss_dssp HHHHHHHHTTCHHH-HHHHHHHHHHHCTT
T ss_pred HHHHHHHHCCCHHH-HHHHHHHHHHHCcC
Confidence 99999988887754 44455555554444
No 73
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.40 E-value=1.4e-12 Score=108.07 Aligned_cols=73 Identities=19% Similarity=0.334 Sum_probs=65.4
Q ss_pred CCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEEEEEecCCCccCCCCC
Q psy8368 28 NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKSDFFASYELCFGALGC 102 (372)
Q Consensus 28 ~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~~i~~~~~yg~~g~ 102 (372)
.++.||.|++||++++..+|++|||++.. . |++|.+|.+.++|||+.+|.+|++|++..|.|||+.+||..+.
T Consensus 6 ~i~~gd~V~v~Y~g~~~~dG~~fdss~~~-~-p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~~ 78 (151)
T 2kr7_A 6 LESIKQAALIEYEVREQGSSIVLDSNISK-E-PLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYES 78 (151)
T ss_dssp CTTSCCEEEEEEEEEESSCSCEEEESTTT-C-CEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCS
T ss_pred CCCCCCEEEEEEEEEECCCCCEEEeCCCC-c-CEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCCc
Confidence 37899999999999987235699999753 4 9999999999999999999999999999999999999998753
No 74
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.39 E-value=1.2e-12 Score=129.16 Aligned_cols=116 Identities=21% Similarity=0.350 Sum_probs=107.5
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
+.+..+...|+.+++.|+|++|+..|++|++..+.. ..+++|+|.||.++|+|++|+.+++++++
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 68 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN---------------AIYYGNRSLAYLRTECYGYALGDATRAIE 68 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 456778889999999999999999999999986654 68999999999999999999999999998
Q ss_pred hhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHH
Q psy8368 233 FASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADL 290 (372)
Q Consensus 233 ~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~ 290 (372)
++|+++.+++++|.+|..+|++++|+..|++|++++|++. .+...+..+..
T Consensus 69 ----l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~---~~~~~l~~~~~ 119 (477)
T 1wao_1 69 ----LDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDK---DAKMKYQECNK 119 (477)
T ss_dssp ----SCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCT---THHHHHHHHHH
T ss_pred ----hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 88888888743
No 75
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.38 E-value=9.1e-12 Score=109.53 Aligned_cols=118 Identities=14% Similarity=0.069 Sum_probs=106.6
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhc
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFAS 235 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~ 235 (372)
..+...|..++..|+|.+|+..|.+++...+.. ..++.++|.+|..+|+|++|+.+++++++
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~al~--- 104 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYNL---------------ANAYIGKSAAYRDMKNNQEYIATLTEGIK--- 104 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSH---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcch---------------HHHHHHHHHHHHHcccHHHHHHHHHHHHH---
Confidence 456669999999999999999999999886553 67899999999999999999999999998
Q ss_pred cCCCCch-------hHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC--CccHHHHHHHHHHHHHHHHHH
Q psy8368 236 HFATKDV-------KLFFVWGKALIGLQEWTSAIKHLKTARKLAAK--DSVRAEIDKEILKADLGNQQY 295 (372)
Q Consensus 236 ~~~p~~~-------ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~--~~~~~~~~~~l~~~~~~~~~~ 295 (372)
++|++. .+|+++|.++..+|++++|+..|+++++++|+ +. .+...++.+....+..
T Consensus 105 -~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~---~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 105 -AVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKT---DALYSLGVLFYNNGAD 169 (228)
T ss_dssp -HSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHH---HHHHHHHHHHHHHHHH
T ss_pred -HCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccH---HHHHHHHHHHHHHHHH
Confidence 899988 77999999999999999999999999999999 88 8888888887665544
No 76
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.37 E-value=2e-11 Score=103.48 Aligned_cols=130 Identities=15% Similarity=0.068 Sum_probs=114.8
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|..++..|++.+|+..+.+++...+.. ..++.++|.++...+++..|+..+.++++
T Consensus 39 ~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~a~~~~~~a~~-- 101 (184)
T 3vtx_A 39 VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTS---------------AEAYYILGSANFMIDEKQAAIDALQRAIA-- 101 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchh---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--
Confidence 5678889999999999999999999999887655 57888999999999999999999999998
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMF 307 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (372)
++|.+..+++.+|.+|..+|++++|+..|+++++++|++. .+...++.+....+++.++ ...|.+.+
T Consensus 102 --~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~---~~~~~lg~~~~~~g~~~~A-~~~~~~al 168 (184)
T 3vtx_A 102 --LNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFI---RAYQSIGLAYEGKGLRDEA-VKYFKKAL 168 (184)
T ss_dssp --HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHTTCHHHH-HHHHHHHH
T ss_pred --hCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhh---hHHHHHHHHHHHCCCHHHH-HHHHHHHH
Confidence 8999999999999999999999999999999999999999 9999999998887776543 34444444
No 77
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.37 E-value=4.5e-12 Score=97.41 Aligned_cols=101 Identities=13% Similarity=0.119 Sum_probs=93.1
Q ss_pred HHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhcc
Q psy8368 157 ELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASH 236 (372)
Q Consensus 157 ~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~ 236 (372)
.+...|..++..|+|.+|+..|.+++...+.. ..++.++|.+|..+|+|++|+.+++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~---- 68 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLDPEE---------------SKYWLMKGKALYNLERYEEAVDCYNYVIN---- 68 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCC---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHH----
Confidence 34568899999999999999999999986544 56889999999999999999999999998
Q ss_pred CCCC--chhHHHHHHHHHHhc-CCHHHHHHHHHHHHhhcCCCc
Q psy8368 237 FATK--DVKLFFVWGKALIGL-QEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 237 ~~p~--~~ka~~r~a~a~~~l-~~~e~A~~~~~~al~l~p~~~ 276 (372)
.+|. +..+++.+|.++..+ |++++|+.++.+++...|++.
T Consensus 69 ~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 69 VIEDEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp TSCCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred hCcccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 8999 999999999999999 999999999999999999864
No 78
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.37 E-value=1e-12 Score=109.38 Aligned_cols=100 Identities=10% Similarity=-0.063 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDK 283 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~ 283 (372)
...++++|.+++++|+|++|+..|++++. ++|+++.+|+.+|.+|..+|+|++|+.+|++|++++|+++ .++.
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~----~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~---~~~~ 108 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCI----YDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDY---TPVF 108 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCC---HHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCc---HHHH
Confidence 57899999999999999999999999998 9999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCC
Q psy8368 284 EILKADLGNQQYQKETKARCMKMFSSSS 311 (372)
Q Consensus 284 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (372)
.++.+...++++.+ ....|.+.+...+
T Consensus 109 ~lg~~~~~lg~~~e-A~~~~~~al~l~~ 135 (151)
T 3gyz_A 109 HTGQCQLRLKAPLK-AKECFELVIQHSN 135 (151)
T ss_dssp HHHHHHHHTTCHHH-HHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCHHH-HHHHHHHHHHhCC
Confidence 99999998888754 4445555554443
No 79
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.36 E-value=2.3e-11 Score=102.65 Aligned_cols=103 Identities=16% Similarity=0.237 Sum_probs=96.7
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHH-HHHccCH--HHHHHHHHHHH
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVC-YNNNKQY--KLTCDCASKAL 231 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~-~~kl~~y--~~Ai~~~~~aL 231 (372)
...+...|..++..|+|.+|+..|.+++...+.. ..++.++|.+ |...|++ ++|+.++++++
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~l~~~~~~~~~~~A~~~~~~al 108 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGEN---------------AELYAALATVLYYQASQHMTAQTRAMIDKAL 108 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSC---------------HHHHHHHHHHHHHHTTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC---------------HHHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Confidence 4678899999999999999999999999987654 5788999999 8899999 99999999999
Q ss_pred HhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 232 QFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 232 ~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
+ .+|++..+++.+|.+|..+|++++|+..|+++++++|++.
T Consensus 109 ~----~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 149 (177)
T 2e2e_A 109 A----LDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRI 149 (177)
T ss_dssp H----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTS
T ss_pred H----hCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCc
Confidence 8 8999999999999999999999999999999999999998
No 80
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.36 E-value=9.3e-13 Score=109.20 Aligned_cols=72 Identities=25% Similarity=0.345 Sum_probs=64.5
Q ss_pred CCCCCEEEEEEEEEEcCCceeEeeccc-------------CCCcCeEEEcCCCccchHHHHHhccCCCCcEEEEEecCCC
Q psy8368 29 PVLGAHVQVHYMYYAEANELPIDITYL-------------RKSIPERFQLGSSGLIPAFEYAILSMQKGEKSDFFASYEL 95 (372)
Q Consensus 29 ~~~g~~V~v~y~~~~~~~~~~~dst~~-------------~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~~i~~~~ 95 (372)
++.||.|++||++++.+ |++||||+. ... |++|.+|.+.++|||+.+|.+|++|++..|.|||+.
T Consensus 2 i~~gd~V~v~Y~g~~~d-G~~fdss~~~~a~~~g~~~~~~~~~-P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~ 79 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLES-GDVFDTSIEEVAKEAGIYAPDREYE-PLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEK 79 (151)
T ss_dssp CCTTCEEEECCEECCTT-SCCCEESCHHHHHHHTCCCSSCCCC-CEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTT
T ss_pred CCCCCEEEEEEEEEECC-CCEEEecchhhcccccccccccCCC-CEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHH
Confidence 67899999999999865 469999963 235 999999999999999999999999999999999999
Q ss_pred ccCCCCC
Q psy8368 96 CFGALGC 102 (372)
Q Consensus 96 ~yg~~g~ 102 (372)
+||..+.
T Consensus 80 aYG~~~~ 86 (151)
T 1ix5_A 80 AYGNRNE 86 (151)
T ss_dssp SSCSCCS
T ss_pred HCCCCCc
Confidence 9998654
No 81
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.35 E-value=1e-11 Score=108.40 Aligned_cols=76 Identities=13% Similarity=0.003 Sum_probs=70.3
Q ss_pred hhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCC
Q psy8368 161 SGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATK 240 (372)
Q Consensus 161 ~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~ 240 (372)
.|..++..|+|++|+..|.+++...|.. ..+++++|.+|..+|+|++|+.+++++++ ++|+
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~P~ 120 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNN---------------VDCLEACAEMQVCRGQEKDALRMYEKILQ----LEAD 120 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HCTT
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----cCCC
Confidence 9999999999999999999999997765 68899999999999999999999999998 9999
Q ss_pred chhHHHHHHHHHHhc
Q psy8368 241 DVKLFFVWGKALIGL 255 (372)
Q Consensus 241 ~~ka~~r~a~a~~~l 255 (372)
++.+++++|.+|..+
T Consensus 121 ~~~a~~~lg~~~~~~ 135 (208)
T 3urz_A 121 NLAANIFLGNYYYLT 135 (208)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 999998888887544
No 82
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.34 E-value=3.7e-11 Score=104.11 Aligned_cols=137 Identities=17% Similarity=0.128 Sum_probs=113.7
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..+..+...|+.++..|+|.+|+..|.+++.. . ..+++++|.||.++|+|++|+.+++++++
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~---~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 65 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQDP---H---------------SRICFNIGCMYTILKNMTEAEKAFTRSIN 65 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSSSC---C---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCC---C---------------hHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45667889999999999999999999988521 1 46899999999999999999999999998
Q ss_pred hhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc-------------cHHHHHHHHHHHHHHHHHHHHHH
Q psy8368 233 FASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS-------------VRAEIDKEILKADLGNQQYQKET 299 (372)
Q Consensus 233 ~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~-------------~~~~~~~~l~~~~~~~~~~~~~~ 299 (372)
++|+++.+++++|.+|..+|++++|+.+|++++++.|++. ....+...++.+....+++.+ .
T Consensus 66 ----~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~-A 140 (213)
T 1hh8_A 66 ----RDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKK-A 140 (213)
T ss_dssp ----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHH-H
T ss_pred ----hCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHH-H
Confidence 8899999999999999999999999999999999888643 233678888888887776654 4
Q ss_pred HHHHHhhccCCCC
Q psy8368 300 KARCMKMFSSSSS 312 (372)
Q Consensus 300 ~~~~~~~~~~~~~ 312 (372)
...+.+.+...+.
T Consensus 141 ~~~~~~al~~~p~ 153 (213)
T 1hh8_A 141 EEQLALATSMKSE 153 (213)
T ss_dssp HHHHHHHHTTCCS
T ss_pred HHHHHHHHHcCcc
Confidence 5566666665554
No 83
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.32 E-value=2.4e-11 Score=107.61 Aligned_cols=111 Identities=24% Similarity=0.314 Sum_probs=68.6
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|..++..|+|.+|+..|.+++...+.. ..++.++|.+|.++|+|++|+.+++++++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~al~-- 201 (258)
T 3uq3_A 139 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED---------------ARGYSNRAAALAKLMSFPEAIADCNKAIE-- 201 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCccc---------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHH--
Confidence 3445556666666666666666666666654432 35566666666666666666666666665
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhc------CCCccHHHHHHHHHH
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLA------AKDSVRAEIDKEILK 287 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~------p~~~~~~~~~~~l~~ 287 (372)
.+|++..+++.+|.+|..+|++++|+..|+++++++ |++. .+...+.+
T Consensus 202 --~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~---~~~~~l~~ 255 (258)
T 3uq3_A 202 --KDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAR---EIDQLYYK 255 (258)
T ss_dssp --HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHH---HHHHHHHH
T ss_pred --hCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchH---HHHHHHHH
Confidence 566666666666666666666666666666666666 6555 55555443
No 84
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.32 E-value=3.6e-12 Score=109.72 Aligned_cols=71 Identities=20% Similarity=0.257 Sum_probs=64.5
Q ss_pred CCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEEEEEecCCCccCCCCC
Q psy8368 29 PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKSDFFASYELCFGALGC 102 (372)
Q Consensus 29 ~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~~i~~~~~yg~~g~ 102 (372)
++.||.|+|+|++++.+ +++||||+.. . |++|.+|.+.++|+|+++|.+|++|++..|.|||+.+||..+.
T Consensus 3 i~~gd~V~v~Y~g~~~d-G~~fdss~~~-~-P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~~ 73 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTED-GVLVDESPVS-A-PLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDE 73 (196)
T ss_dssp CCSSCEEEEEEEEEETT-TEEEEECCTT-S-CCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCCT
T ss_pred CCCCCEEEEEEEEEECC-CCEEEecCCC-C-CEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCCh
Confidence 67899999999999765 5699999754 5 9999999999999999999999999999999999999998653
No 85
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.32 E-value=1.3e-11 Score=119.77 Aligned_cols=115 Identities=15% Similarity=0.186 Sum_probs=89.5
Q ss_pred CCCCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEEEEEecCCCccCCCCCCCC
Q psy8368 26 GENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKSDFFASYELCFGALGCPPR 105 (372)
Q Consensus 26 g~~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~~i~~~~~yg~~g~~~~ 105 (372)
+..+..||.|++||+++. + |+.|+++. .. |+.|.+|.|.++|||+.+|.||++|++..|.+|+..+||..+.
T Consensus 155 ~~~~~~gD~V~i~y~g~~-d-G~~fd~~~--~~-~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l--- 226 (432)
T 1w26_A 155 DGAVEAEDRVTIDFTGSV-D-GEEFEGGK--AS-DFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL--- 226 (432)
T ss_dssp SSCCCTTCEEEECEEEES-S-SCBCSSCC--CS-SEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT---
T ss_pred CCCCCCCCEEEEEEEEee-C-CeEccCCC--cc-ceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC---
Confidence 345889999999999984 4 56899986 45 9999999999999999999999999999999999999997654
Q ss_pred CCCCCcEEEEEEEEeeecCccccccccccccccccCcc-CchhHHHHHHHH
Q psy8368 106 IPAKADLLFEVHLINFSIDPQVVRSSADIESDFIDSQV-EEPAFAKVLKRA 155 (372)
Q Consensus 106 ip~~~~~~~~iel~~~~~~~~~~~~~~~~~~~~~~~~~-e~~~~~~~~~~~ 155 (372)
+|.+++|.|+|.++. . ..++++.+.|.-... +..+.++.....
T Consensus 227 --ag~~~~F~V~v~~v~-~----~~lpeldDEfak~~~~~~~tleelk~~i 270 (432)
T 1w26_A 227 --KGKAAKFAINLKKVE-E----RELPELTAEFIKRFGVEDGSVEGLRAEV 270 (432)
T ss_dssp --SSCEEEEEEECCEEC-C----EECCCCSHHHHTTTTCSSCCHHHHHHHH
T ss_pred --CCceEEEEEEEEEEe-c----cCCCCcchHHHHHhCccCCCHHHHHHHH
Confidence 678999999999998 2 335555555542221 233444444433
No 86
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.31 E-value=2.8e-11 Score=108.81 Aligned_cols=155 Identities=10% Similarity=0.068 Sum_probs=113.5
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|..++..|+|.+|+..|.+++...+..+ ....+++++|.||+++|+|.+|+..++++++
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~------------~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~-- 80 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHE------------WAADAQFYLARAYYQNKEYLLAASEYERFIQ-- 80 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCST------------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCc------------chHHHHHHHHHHHHHhCcHHHHHHHHHHHHH--
Confidence 67888999999999999999999999999865532 1146899999999999999999999999998
Q ss_pred ccCCCC---chhHHHHHHHHHHh--------cCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8368 235 SHFATK---DVKLFFVWGKALIG--------LQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARC 303 (372)
Q Consensus 235 ~~~~p~---~~ka~~r~a~a~~~--------l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 303 (372)
..|+ ...+++++|.+|.. +|++++|+..|++++++.|++. .+...+..+........ ......
T Consensus 81 --~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~---~~~~a~~~~~~~~~~~~-~~~~~l 154 (261)
T 3qky_A 81 --IYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE---LVDDATQKIRELRAKLA-RKQYEA 154 (261)
T ss_dssp --HCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT---THHHHHHHHHHHHHHHH-HHHHHH
T ss_pred --HCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch---hHHHHHHHHHHHHHHHH-HHHHHH
Confidence 6564 56799999999999 9999999999999999999998 44433322222111111 111222
Q ss_pred HhhccCCCCCCcchHHHhhhhhhccC
Q psy8368 304 MKMFSSSSSPSQHSNVVRIAYQEHEQ 329 (372)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (372)
..++-..+....+...++.++...|.
T Consensus 155 a~~~~~~g~~~~A~~~~~~~l~~~p~ 180 (261)
T 3qky_A 155 ARLYERRELYEAAAVTYEAVFDAYPD 180 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHccCHHHHHHHHHHHHHHCCC
Confidence 23333334444555666666555554
No 87
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.30 E-value=3.8e-11 Score=105.88 Aligned_cols=155 Identities=11% Similarity=0.119 Sum_probs=114.3
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|..++..|+|.+|+..|.+++...+..+ . ...+++++|.||+++|+|++|+..++++++
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~--~----------~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~-- 69 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGP--Y----------SQQVQLDLIYAYYKNADLPLAQAAIDRFIR-- 69 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST--T----------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh--H----------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHH--
Confidence 45678899999999999999999999999866532 1 146889999999999999999999999998
Q ss_pred ccCCCCchh---HHHHHHHHHHh------------------cCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHH
Q psy8368 235 SHFATKDVK---LFFVWGKALIG------------------LQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQ 293 (372)
Q Consensus 235 ~~~~p~~~k---a~~r~a~a~~~------------------l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~ 293 (372)
.+|++.. ++|++|.++.. +|++++|+..|+++++..|++.....+...+..+...+.
T Consensus 70 --~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~ 147 (225)
T 2yhc_A 70 --LNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLA 147 (225)
T ss_dssp --HCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHH
T ss_pred --HCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHH
Confidence 8888776 89999999986 679999999999999999999833344444444433332
Q ss_pred HHHHHHHHHHHhhccCCCCCCcchHHHhhhhhhccC
Q psy8368 294 QYQKETKARCMKMFSSSSSPSQHSNVVRIAYQEHEQ 329 (372)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (372)
... .....++-..+....+...++.++...|.
T Consensus 148 ~~~----~~~a~~~~~~~~~~~A~~~~~~~l~~~p~ 179 (225)
T 2yhc_A 148 KYE----YSVAEYYTERGAWVAVVNRVEGMLRDYPD 179 (225)
T ss_dssp HHH----HHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHH----HHHHHHHHHcCcHHHHHHHHHHHHHHCcC
Confidence 221 11122222233334566666666666554
No 88
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.30 E-value=6.8e-11 Score=93.29 Aligned_cols=119 Identities=18% Similarity=0.271 Sum_probs=104.9
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhc
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFAS 235 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~ 235 (372)
..+...|..++..|++.+|+..|.+++...+.. ..++.++|.++...+++++|+..++++++
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~--- 63 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALE--- 63 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH---
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcc---------------hhHHHHHHHHHHHhcCHHHHHHHHHHHHH---
Confidence 346678999999999999999999999875443 46788999999999999999999999998
Q ss_pred cCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHH
Q psy8368 236 HFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQ 296 (372)
Q Consensus 236 ~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~ 296 (372)
.+|.+..+++.+|.++...|++++|+..+.+++++.|.+. .+...+..+....++..
T Consensus 64 -~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~---~~~~~la~~~~~~~~~~ 120 (136)
T 2fo7_A 64 -LDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSA---EAWYNLGNAYYKQGDYD 120 (136)
T ss_dssp -HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHTTTCHH
T ss_pred -HCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh---HHHHHHHHHHHHHccHH
Confidence 8899999999999999999999999999999999999998 88888877776655544
No 89
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.30 E-value=3.5e-11 Score=104.26 Aligned_cols=103 Identities=15% Similarity=0.137 Sum_probs=95.2
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|..++..|+|.+|+..|.+++...+.. ..+++++|.+|..+|+|++|+.+++++++
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~---------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~-- 99 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHL---------------AVAYFQRGMLYYQTEKYDLAIKDLKEALI-- 99 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc---------------hHHHHHHHHHHHHcccHHHHHHHHHHHHH--
Confidence 4678899999999999999999999999987654 57899999999999999999999999998
Q ss_pred ccCCCCch----------------hHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 235 SHFATKDV----------------KLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 235 ~~~~p~~~----------------ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
..|.+. .+++++|.+|..+|++++|+.+|+++++++|++.
T Consensus 100 --~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 100 --QLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp --TTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred --hCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 667666 9999999999999999999999999999999876
No 90
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.29 E-value=1.1e-10 Score=102.49 Aligned_cols=131 Identities=18% Similarity=0.163 Sum_probs=111.8
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
...+...|..++..|++.+|+..|.+++...+.. ..++.++|.+|..+|++++|+..++++++
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~-- 119 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELDSSA---------------ATAYYGAGNVYVVKEMYKEAKDMFEKALR-- 119 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc---------------hHHHHHHHHHHHHhccHHHHHHHHHHHHH--
Confidence 5677889999999999999999999999886543 57889999999999999999999999998
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFS 308 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 308 (372)
.+|.+..+++.+|.+|..+|++++|+..++++++++|++. .+...++.+....+++.++ ...+.+++.
T Consensus 120 --~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~A-~~~~~~~~~ 187 (243)
T 2q7f_A 120 --AGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDT---EARFQFGMCLANEGMLDEA-LSQFAAVTE 187 (243)
T ss_dssp --HTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHHTCCHHH-HHHHHHHHH
T ss_pred --hCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccH---HHHHHHHHHHHHcCCHHHH-HHHHHHHHH
Confidence 8899999999999999999999999999999999999998 8888888887776665443 334444433
No 91
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.29 E-value=1e-10 Score=104.83 Aligned_cols=113 Identities=15% Similarity=0.002 Sum_probs=102.2
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+..+...|..++..|+|.+|+..|.+++...+.. ..++.++|.+|..+|+|++|+.+++++++
T Consensus 42 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~al~- 105 (275)
T 1xnf_A 42 RAQLLYERGVLYDSLGLRALARNDFSQALAIRPDM---------------PEVFNYLGIYLTQAGNFDAAYEAFDSVLE- 105 (275)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCc---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHh-
Confidence 46778899999999999999999999999986554 57899999999999999999999999998
Q ss_pred hccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Q psy8368 234 ASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKA 288 (372)
Q Consensus 234 ~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~ 288 (372)
++|.+..+++.+|.+|..+|++++|+..|+++++++|++. .....+..+
T Consensus 106 ---~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~---~~~~~~~~~ 154 (275)
T 1xnf_A 106 ---LDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDP---FRSLWLYLA 154 (275)
T ss_dssp ---HCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHH
T ss_pred ---cCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCh---HHHHHHHHH
Confidence 8999999999999999999999999999999999999998 555444433
No 92
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.29 E-value=1.1e-10 Score=97.74 Aligned_cols=120 Identities=15% Similarity=0.124 Sum_probs=95.1
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
...+...|..++..|++.+|+..|.+++...+.. ..++.++|.++...|++++|+.+++++++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~-- 104 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPDN---------------VKVATVLGLTYVQVQKYDLAVPLLIKVAE-- 104 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH--
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHh--
Confidence 4456677888888888888888888888775443 46778888888888888888888888887
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHH
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQ 296 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~ 296 (372)
.+|.+..+++.+|.++..+|++++|+..+++++++.|++. .+...++.+....+++.
T Consensus 105 --~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~---~~~~~la~~~~~~~~~~ 161 (186)
T 3as5_A 105 --ANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEG---KVHRAIAFSYEQMGRHE 161 (186)
T ss_dssp --HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHTTCHH
T ss_pred --cCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccch---HHHHHHHHHHHHcCCHH
Confidence 7788888888888888888888888888888888888887 77777777776665543
No 93
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.29 E-value=1.2e-10 Score=107.99 Aligned_cols=124 Identities=19% Similarity=0.243 Sum_probs=109.4
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
........|..++..|++.+|+..|.+++...+..+ .....++.++|.||.++|+|++|+..++++++
T Consensus 233 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~-----------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~- 300 (359)
T 3ieg_A 233 KLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVA-----------EYTVRSKERICHCFSKDEKPVEAIRICSEVLQ- 300 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCch-----------HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH-
Confidence 344556779999999999999999999999865421 12346788999999999999999999999998
Q ss_pred hccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHH
Q psy8368 234 ASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQY 295 (372)
Q Consensus 234 ~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~ 295 (372)
.+|+++.+++.+|.+|..+|++++|+..|+++++++|++. .++..+..+...+++.
T Consensus 301 ---~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~---~~~~~l~~~~~~~~~~ 356 (359)
T 3ieg_A 301 ---MEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQ---QIREGLEKAQRLLKQS 356 (359)
T ss_dssp ---HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCH---HHHHHHHHHHHHHHHH
T ss_pred ---hCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCh---HHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999 9999999998877654
No 94
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.29 E-value=1.4e-10 Score=104.32 Aligned_cols=142 Identities=6% Similarity=0.063 Sum_probs=117.1
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHH--------ccCHHHHHHH
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNN--------NKQYKLTCDC 226 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~k--------l~~y~~Ai~~ 226 (372)
...+...|..++..|+|.+|+..|.+++...|..+ . ...+++++|.||+. +|++++|+..
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~--~----------~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~ 119 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDP--R----------VPQAEYERAMCYYKLSPPYELDQTDTRKAIEA 119 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT--T----------HHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCc--h----------hHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence 67889999999999999999999999999876542 1 14679999999999 9999999999
Q ss_pred HHHHHHhhccCCCCchhHH-----------------HHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHH
Q psy8368 227 ASKALQFASHFATKDVKLF-----------------FVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKAD 289 (372)
Q Consensus 227 ~~~aL~~~~~~~p~~~ka~-----------------~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~ 289 (372)
++++++ ..|++..+. +.+|.+|..+|+|++|+..|+++++..|++.....+...++.+.
T Consensus 120 ~~~~l~----~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~ 195 (261)
T 3qky_A 120 FQLFID----RYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAY 195 (261)
T ss_dssp HHHHHH----HCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHH
T ss_pred HHHHHH----HCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHH
Confidence 999998 888877666 99999999999999999999999999999764447888888887
Q ss_pred HHH----------HHHHHHHHHHHHhhccCCCCC
Q psy8368 290 LGN----------QQYQKETKARCMKMFSSSSSP 313 (372)
Q Consensus 290 ~~~----------~~~~~~~~~~~~~~~~~~~~~ 313 (372)
..+ +++ ......|.++....+..
T Consensus 196 ~~~g~~~~~~~~~~~~-~~A~~~~~~~~~~~p~~ 228 (261)
T 3qky_A 196 IAYAEQSVRARQPERY-RRAVELYERLLQIFPDS 228 (261)
T ss_dssp HHHHHTSCGGGHHHHH-HHHHHHHHHHHHHCTTC
T ss_pred HHhcccchhhcccchH-HHHHHHHHHHHHHCCCC
Confidence 765 333 34456666666555544
No 95
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.28 E-value=4.5e-11 Score=117.76 Aligned_cols=122 Identities=12% Similarity=0.004 Sum_probs=112.2
Q ss_pred HHHHHhhHHHHhc---------cCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHc--------c
Q psy8368 156 QELGASGKNAFND---------KNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNN--------K 218 (372)
Q Consensus 156 ~~~k~~Gn~~~~~---------g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl--------~ 218 (372)
..+...|..++.. |+|++|+..|++|+.+.+.. ..+++++|.+|..+ +
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~~~~~~~~~g 235 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLD---------------GRSWYILGNAYLSLYFNTGQNPK 235 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHHHHhhccccc
Confidence 5677889999999 99999999999999997665 57899999999999 9
Q ss_pred CHHHHHHHHHHHHHhhccCCC---CchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHH
Q psy8368 219 QYKLTCDCASKALQFASHFAT---KDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQY 295 (372)
Q Consensus 219 ~y~~Ai~~~~~aL~~~~~~~p---~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~ 295 (372)
+|++|+.+++++++ ++| +++.+|+++|.+|..+|++++|+..|++|++++|++. .++..+..+...+++.
T Consensus 236 ~~~~A~~~~~~al~----~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~---~a~~~l~~~~~~lg~~ 308 (474)
T 4abn_A 236 ISQQALSAYAQAEK----VDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWP---EPQQREQQLLEFLSRL 308 (474)
T ss_dssp HHHHHHHHHHHHHH----HCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH----hCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHHHH
Confidence 99999999999998 899 9999999999999999999999999999999999999 9999999998888776
Q ss_pred HHHH
Q psy8368 296 QKET 299 (372)
Q Consensus 296 ~~~~ 299 (372)
.+..
T Consensus 309 ~eAi 312 (474)
T 4abn_A 309 TSLL 312 (474)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 96
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.27 E-value=1e-10 Score=103.54 Aligned_cols=144 Identities=10% Similarity=0.066 Sum_probs=115.0
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCC-----hHHH------HHHHHHHHHHHHHHHHHHHHccCHHHH
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTN-----YEDQ------MQLEEYLCRVYRNLMVCYNNNKQYKLT 223 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~-----~~~~------~~~~~l~~~l~~Nla~~~~kl~~y~~A 223 (372)
+..+...|..++..|++.+|+..|.+++.+.+...... +... .........++.++|.++..+|+|++|
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 158 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNA 158 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHH
Confidence 67888999999999999999999999998643210000 0000 001122356899999999999999999
Q ss_pred HHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8368 224 CDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARC 303 (372)
Q Consensus 224 i~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 303 (372)
+.+++++++ .+|.+..+++.+|.+|..+|++++|+..|+++++++|++. .+...++.+....+++.++ ...+
T Consensus 159 ~~~~~~a~~----~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~---~~~~~l~~~~~~~g~~~~A-~~~~ 230 (258)
T 3uq3_A 159 VKAYTEMIK----RAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFV---RAYIRKATAQIAVKEYASA-LETL 230 (258)
T ss_dssp HHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHTTCHHHH-HHHH
T ss_pred HHHHHHHHh----cCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHH---HHHHHHHHHHHHHhhHHHH-HHHH
Confidence 999999998 8999999999999999999999999999999999999999 9999999888877766443 3344
Q ss_pred Hhh
Q psy8368 304 MKM 306 (372)
Q Consensus 304 ~~~ 306 (372)
.+.
T Consensus 231 ~~a 233 (258)
T 3uq3_A 231 DAA 233 (258)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 97
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.27 E-value=7.4e-11 Score=118.53 Aligned_cols=133 Identities=10% Similarity=-0.011 Sum_probs=117.4
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|..++..|+|++|+..|++++...+.. ..++.++|.+|..+|+|++|+.+++++++
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~-- 85 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPGH---------------PEAVARLGRVRWTQQRHAEAAVLLQQASD-- 85 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHh--
Confidence 5678889999999999999999999999986654 57899999999999999999999999998
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhccCC
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGN---QQYQKETKARCMKMFSSS 310 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~ 310 (372)
++|++..+++++|.+|..+|++++|+..|+++++++|++. .+...+..+.... +++.+ ....+.+.+...
T Consensus 86 --~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~---~~~~~l~~~~~~~~~~g~~~~-A~~~~~~al~~~ 158 (568)
T 2vsy_A 86 --AAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEP---YITAQLLNWRRRLCDWRALDV-LSAQVRAAVAQG 158 (568)
T ss_dssp --HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHTTCCTTHHH-HHHHHHHHHHHT
T ss_pred --cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHhhccccHHH-HHHHHHHHHhcC
Confidence 8999999999999999999999999999999999999999 9999999998887 66543 344555544433
No 98
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.26 E-value=4.3e-12 Score=98.04 Aligned_cols=95 Identities=13% Similarity=0.139 Sum_probs=81.1
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+..+...|+.++..|+|.+|+..|.+++...+.. ..+++|+|.||.++|+|++|+.+|+++++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~- 66 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQN---------------PVGYSNKAMALIKLGEYTQAIQMCQQGLR- 66 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHT-
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHH-
Confidence 35678889999999999999999999999886654 57788999999999999999999999997
Q ss_pred hccCCCCc------hhHHHHHHHHHHhcCCHHHHHHHHHH
Q psy8368 234 ASHFATKD------VKLFFVWGKALIGLQEWTSAIKHLKT 267 (372)
Q Consensus 234 ~~~~~p~~------~ka~~r~a~a~~~l~~~e~A~~~~~~ 267 (372)
++|++ .++++++|.++..+|+++.|+..+++
T Consensus 67 ---~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 67 ---YTSTAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp ---SCSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred ---hCCCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 88888 88999999999998888877766553
No 99
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.26 E-value=6.5e-11 Score=99.05 Aligned_cols=133 Identities=13% Similarity=0.054 Sum_probs=115.0
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+..+...|..++..|++.+|+..|.+++...+.. ..++.++|.++...|++++|+.+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~~~~- 70 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFD---------------VDVALHLGIAYVKTGAVDRGTELLERSLA- 70 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccC---------------hHHHHHHHHHHHHcCCHHHHHHHHHHHHh-
Confidence 46778889999999999999999999998875443 57889999999999999999999999998
Q ss_pred hccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q psy8368 234 ASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSS 309 (372)
Q Consensus 234 ~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (372)
.+|.+..+++.+|.++...|++++|+..++++++++|.+. .+...++.+....+++.+ ....+.+++..
T Consensus 71 ---~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~---~~~~~~a~~~~~~~~~~~-A~~~~~~~~~~ 139 (186)
T 3as5_A 71 ---DAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINF---NVRFRLGVALDNLGRFDE-AIDSFKIALGL 139 (186)
T ss_dssp ---HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHTTCHHH-HHHHHHHHHHH
T ss_pred ---cCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhH---HHHHHHHHHHHHcCcHHH-HHHHHHHHHhc
Confidence 8899999999999999999999999999999999999999 888888888877766643 33444444443
No 100
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.26 E-value=2.1e-11 Score=100.67 Aligned_cols=111 Identities=8% Similarity=0.033 Sum_probs=94.6
Q ss_pred HHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhc
Q psy8368 176 RRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGL 255 (372)
Q Consensus 176 ~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l 255 (372)
..|++++...+.. ...++++|.+++..|+|++|+..+++++. .+|+++.+|+.+|.+|..+
T Consensus 8 ~~~~~al~~~p~~---------------~~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~lg~~~~~~ 68 (148)
T 2vgx_A 8 GTIAMLNEISSDT---------------LEQLYSLAFNQYQSGXYEDAHXVFQALCV----LDHYDSRFFLGLGACRQAM 68 (148)
T ss_dssp CSHHHHTTCCHHH---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHT
T ss_pred hhHHHHHcCCHhh---------------HHHHHHHHHHHHHcCChHHHHHHHHHHHH----cCcccHHHHHHHHHHHHHH
Confidence 3466666665443 57889999999999999999999999998 9999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q psy8368 256 QEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSS 309 (372)
Q Consensus 256 ~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (372)
|++++|+.+|++++.++|++. .+...++.+....++..++ ...|.+.+..
T Consensus 69 g~~~~A~~~~~~al~l~p~~~---~~~~~lg~~~~~~g~~~~A-~~~~~~al~~ 118 (148)
T 2vgx_A 69 GQYDLAIHSYSYGAVMDIXEP---RFPFHAAECLLQXGELAEA-ESGLFLAQEL 118 (148)
T ss_dssp TCHHHHHHHHHHHHHHSTTCT---HHHHHHHHHHHHTTCHHHH-HHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCCCCc---hHHHHHHHHHHHcCCHHHH-HHHHHHHHHH
Confidence 999999999999999999999 9999999998888877543 3455554443
No 101
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.26 E-value=8.8e-11 Score=115.70 Aligned_cols=115 Identities=20% Similarity=0.100 Sum_probs=107.7
Q ss_pred HHHHHHhhHHHHhccCH-HHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 155 AQELGASGKNAFNDKNI-VSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~-~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
+..+...|..++..|+| .+|+..|++|++..+.. ..+++++|.||.++|+|++|+.+++++++
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~g~~~~A~~~~~~al~- 165 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPEL---------------VEAWNQLGEVYWKKGDVTSAHTCFSGALT- 165 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHh-
Confidence 56788999999999999 99999999999997665 57899999999999999999999999997
Q ss_pred hccCCCCchhHHHHHHHHHHhc---------CCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHH
Q psy8368 234 ASHFATKDVKLFFVWGKALIGL---------QEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGN 292 (372)
Q Consensus 234 ~~~~~p~~~ka~~r~a~a~~~l---------~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~ 292 (372)
++|+ ..+++++|.+|..+ |++++|+..|++|++++|++. .++..++.+....
T Consensus 166 ---~~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~---~~~~~lg~~~~~~ 226 (474)
T 4abn_A 166 ---HCKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDG---RSWYILGNAYLSL 226 (474)
T ss_dssp ---TCCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHH
T ss_pred ---hCCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHH
Confidence 8898 79999999999999 999999999999999999999 9999999988777
No 102
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.25 E-value=1.4e-10 Score=110.00 Aligned_cols=147 Identities=15% Similarity=0.059 Sum_probs=97.6
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccC-------------CChHHHHHHHH------HHHHHHHHHHHHHH
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQV-------------TNYEDQMQLEE------YLCRVYRNLMVCYN 215 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~-------------~~~~~~~~~~~------l~~~l~~Nla~~~~ 215 (372)
+..+...|..+...|++.+|+..|++++...+.... ..++....+.. -...++.++|.+|.
T Consensus 169 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 248 (388)
T 1w3b_A 169 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYY 248 (388)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHH
Confidence 566777888888888888888888888776543210 00000000010 01456777788888
Q ss_pred HccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHH
Q psy8368 216 NNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQY 295 (372)
Q Consensus 216 kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~ 295 (372)
++|++++|+..++++++ .+|+++.+++.+|.+|..+|++++|+..|+++++++|++. .+...+..+....++.
T Consensus 249 ~~g~~~~A~~~~~~al~----~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~---~~~~~l~~~~~~~g~~ 321 (388)
T 1w3b_A 249 EQGLIDLAIDTYRRAIE----LQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHA---DSLNNLANIKREQGNI 321 (388)
T ss_dssp HTTCHHHHHHHHHHHHH----TCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHTTTCH
T ss_pred HcCCHHHHHHHHHHHHh----hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccH---HHHHHHHHHHHHcCCH
Confidence 88888888888888876 7777777888888888888888888888888888888777 7777777776665555
Q ss_pred HHHHHHHHHhhccC
Q psy8368 296 QKETKARCMKMFSS 309 (372)
Q Consensus 296 ~~~~~~~~~~~~~~ 309 (372)
.+ ....+.+++..
T Consensus 322 ~~-A~~~~~~al~~ 334 (388)
T 1w3b_A 322 EE-AVRLYRKALEV 334 (388)
T ss_dssp HH-HHHHHHHHTTS
T ss_pred HH-HHHHHHHHHhc
Confidence 43 33445554443
No 103
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.24 E-value=7e-11 Score=110.73 Aligned_cols=120 Identities=17% Similarity=0.098 Sum_probs=82.5
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|..++..|++.+|+..|.+++...+.. ..+++++|.+|.++|+|++|+.+++++++
T Consensus 217 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~-- 279 (368)
T 1fch_A 217 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPND---------------YLLWNKLGATLANGNQSEEAVAAYRRALE-- 279 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--
Confidence 3455666777777777777777777777664433 45667777777777777777777777776
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCC-----------ccHHHHHHHHHHHHHHHHHHH
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKD-----------SVRAEIDKEILKADLGNQQYQ 296 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~-----------~~~~~~~~~l~~~~~~~~~~~ 296 (372)
++|++..+++.+|.+|..+|++++|+..|+++++++|++ . .++..+..+...+++..
T Consensus 280 --~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~g~~~ 347 (368)
T 1fch_A 280 --LQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSE---NIWSTLRLALSMLGQSD 347 (368)
T ss_dssp --HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCH---HHHHHHHHHHHHHTCGG
T ss_pred --hCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhh---HHHHHHHHHHHHhCChH
Confidence 667777777777777777777777777777777777766 4 56666666665555443
No 104
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.24 E-value=1.7e-10 Score=109.50 Aligned_cols=113 Identities=16% Similarity=0.057 Sum_probs=67.1
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|..++..|++++|+..|++++...|.. ...+.++|.++.+.|++++|+..++++++
T Consensus 67 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~-- 129 (388)
T 1w3b_A 67 AEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDF---------------IDGYINLAAALVAAGDMEGAVQAYVSALQ-- 129 (388)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHSCSSHHHHHHHHHHH--
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcch---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--
Confidence 4567888999999999999999999998876543 33444555555555555555555555554
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHH
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKAD 289 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~ 289 (372)
.+|++..++..+|.++..+|++++|+..|.++++++|++. .++..++.+.
T Consensus 130 --~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~---~~~~~l~~~~ 179 (388)
T 1w3b_A 130 --YNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFA---VAWSNLGCVF 179 (388)
T ss_dssp --HCTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHH
T ss_pred --hCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHH
Confidence 4455555555555555555555555555555555555544 4444444443
No 105
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.24 E-value=3.5e-11 Score=123.90 Aligned_cols=132 Identities=8% Similarity=-0.059 Sum_probs=116.5
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhc
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFAS 235 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~ 235 (372)
..+...|..++..|+|++|+..|++++...+.. ..+++++|.+|..+|+|++|+.+++++++
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~g~~~~A~~~~~~al~--- 495 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAERVGWR---------------WRLVWYRAVAELLTGDYDSATKHFTEVLD--- 495 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH---
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhccCcch---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH---
Confidence 467788999999999999999999999987665 67899999999999999999999999998
Q ss_pred cCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q psy8368 236 HFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSSSS 311 (372)
Q Consensus 236 ~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (372)
++|++..+++++|.+|..+|++++ +.+|++|++++|++. .++..++.+....+++.+ ....|.+......
T Consensus 496 -l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~---~a~~~lg~~~~~~g~~~~-A~~~~~~al~l~P 565 (681)
T 2pzi_A 496 -TFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVI---SAAFGLARARSAEGDRVG-AVRTLDEVPPTSR 565 (681)
T ss_dssp -HSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCH---HHHHHHHHHHHHTTCHHH-HHHHHHTSCTTST
T ss_pred -hCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchH---HHHHHHHHHHHHcCCHHH-HHHHHHhhcccCc
Confidence 999999999999999999999999 999999999999999 999999999888887754 3455565554443
No 106
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.23 E-value=9.5e-11 Score=110.18 Aligned_cols=121 Identities=12% Similarity=0.066 Sum_probs=56.5
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|..+...|++.+|+..|.+++...+... + ..+++++|.+|..+|+|++|+.+++++++
T Consensus 177 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~---~----------~~~~~~l~~~~~~~g~~~~A~~~~~~al~-- 241 (365)
T 4eqf_A 177 PGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMI---D----------PDLQTGLGVLFHLSGEFNRAIDAFNAALT-- 241 (365)
T ss_dssp ------------CCHHHHHHHHHHHHHHHHSCSSC---C----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH--
T ss_pred hHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCcc---C----------HHHHHHHHHHHHHCCCHHHHHHHHHHHHH--
Confidence 44444555555555555555555555555533210 0 23455555555555555555555555554
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHH
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQY 295 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~ 295 (372)
.+|++..+++.+|.+|..+|++++|+..|+++++++|++. .+...++.+....+++
T Consensus 242 --~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~---~~~~~l~~~~~~~g~~ 297 (365)
T 4eqf_A 242 --VRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFI---RSRYNLGISCINLGAY 297 (365)
T ss_dssp --HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHHTCC
T ss_pred --hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCch---HHHHHHHHHHHHCCCH
Confidence 4555555555555555555555555555555555555555 5555555554444443
No 107
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.22 E-value=2.3e-10 Score=106.12 Aligned_cols=110 Identities=13% Similarity=0.127 Sum_probs=101.7
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|+.++..|+|.+|+..|.+++...+.. ..++.++|.||..+|+|++|+.+++++++
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~-- 65 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDN---------------YIAYYRRATVFLAMGKSKAALPDLTKVIA-- 65 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccc---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHH--
Confidence 5678899999999999999999999999986654 57899999999999999999999999998
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcC---CCccHHHHHHHHH
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAA---KDSVRAEIDKEIL 286 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p---~~~~~~~~~~~l~ 286 (372)
.+|++..+++.+|.+|..+|++++|+..|+++++++| ++. .+...+.
T Consensus 66 --~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~---~~~~~l~ 115 (359)
T 3ieg_A 66 --LKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEK---EAESQLV 115 (359)
T ss_dssp --HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHH---HHHHHHH
T ss_pred --hCCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChH---HHHHHHH
Confidence 8999999999999999999999999999999999999 877 7776664
No 108
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.21 E-value=3.5e-11 Score=101.51 Aligned_cols=130 Identities=11% Similarity=0.093 Sum_probs=108.4
Q ss_pred hhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCC
Q psy8368 161 SGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATK 240 (372)
Q Consensus 161 ~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~ 240 (372)
.++.++..|+|.+|+..|.+++...+.. ..++.++|.+|..+|+|++|+.+++++++ ++|+
T Consensus 16 ~~~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~~~~~~A~~~~~~al~----~~p~ 76 (177)
T 2e2e_A 16 PLHQFASQQNPEAQLQALQDKIRANPQN---------------SEQWALLGEYYLWQNDYSNSLLAYRQALQ----LRGE 76 (177)
T ss_dssp TTCCCC-----CCCCHHHHHHHHHCCSC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HHCS
T ss_pred hhhhhhhccCHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----cCCC
Confidence 4455678899999999999999986654 57899999999999999999999999998 8899
Q ss_pred chhHHHHHHHH-HHhcCCH--HHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q psy8368 241 DVKLFFVWGKA-LIGLQEW--TSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSSSSSP 313 (372)
Q Consensus 241 ~~ka~~r~a~a-~~~l~~~--e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (372)
+..+++.+|.+ |...|++ ++|+..|+++++++|++. .+...++.+....+++.+ ....+.+++...+..
T Consensus 77 ~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~la~~~~~~g~~~~-A~~~~~~al~~~p~~ 148 (177)
T 2e2e_A 77 NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEI---TALMLLASDAFMQANYAQ-AIELWQKVMDLNSPR 148 (177)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHTTCHHH-HHHHHHHHHHTCCTT
T ss_pred CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcH---HHHHHHHHHHHHcccHHH-HHHHHHHHHhhCCCC
Confidence 99999999999 8899999 999999999999999999 999999999888877654 445666666655544
No 109
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.21 E-value=1.9e-10 Score=101.05 Aligned_cols=131 Identities=12% Similarity=0.072 Sum_probs=112.8
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
...+...|..++..|++.+|+..|.+++...+.. ..++.++|.+|.++|++++|+..++++++
T Consensus 91 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~-- 153 (243)
T 2q7f_A 91 ATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMEN---------------GDLFYMLGTVLVKLEQPKLALPYLQRAVE-- 153 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCS---------------HHHHHHHHHHHHHTSCHHHHHHHHHHHHH--
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHH--
Confidence 4667789999999999999999999999986544 46789999999999999999999999998
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFS 308 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 308 (372)
.+|.+..+++.+|.++..+|++++|+..|+++++++|++. .+...++.+....++..+ ....+.+++.
T Consensus 154 --~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~---~~~~~la~~~~~~~~~~~-A~~~~~~~~~ 221 (243)
T 2q7f_A 154 --LNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHA---DAFYNAGVTYAYKENREK-ALEMLDKAID 221 (243)
T ss_dssp --HCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHTTCTTH-HHHHHHHHHH
T ss_pred --hCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccH---HHHHHHHHHHHHccCHHH-HHHHHHHHHc
Confidence 8899999999999999999999999999999999999999 888888888776655543 3344444443
No 110
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.21 E-value=9.7e-11 Score=93.98 Aligned_cols=89 Identities=8% Similarity=0.082 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc----cHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS----VRA 279 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~----~~~ 279 (372)
+..+.|+|.++++.|+|++|+.+|++||+ ++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++. ..+
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~----~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a 83 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIE----LDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIA 83 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHH
Confidence 56788999999999999999999999998 9999999999999999999999999999999999999875 122
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy8368 280 EIDKEILKADLGNQQYQ 296 (372)
Q Consensus 280 ~~~~~l~~~~~~~~~~~ 296 (372)
.+...++.+...++++.
T Consensus 84 ~~~~~lg~~~~~~~~~~ 100 (127)
T 4gcn_A 84 KAMSRAGNAFQKQNDLS 100 (127)
T ss_dssp HHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHcCCHH
Confidence 34444555555444443
No 111
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.20 E-value=9.7e-11 Score=110.11 Aligned_cols=104 Identities=14% Similarity=0.172 Sum_probs=96.4
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+..+...|..++..|++.+|+..|.+++...+.. ..+++++|.+|.++|+|++|+.+++++++
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~- 275 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPED---------------YSLWNRLGATLANGDRSEEAVEAYTRALE- 275 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHh-
Confidence 35678889999999999999999999999987654 57899999999999999999999999998
Q ss_pred hccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 234 ASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 234 ~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
++|++..+++.+|.+|..+|++++|+..|+++++++|++.
T Consensus 276 ---~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 315 (365)
T 4eqf_A 276 ---IQPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKSR 315 (365)
T ss_dssp ---HCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC-
T ss_pred ---cCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccC
Confidence 8999999999999999999999999999999999999876
No 112
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.20 E-value=2.2e-10 Score=89.55 Aligned_cols=101 Identities=15% Similarity=0.086 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHH
Q psy8368 173 SAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKAL 252 (372)
Q Consensus 173 ~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~ 252 (372)
.|+..|.+++...+.. ..+++++|.+|+.+|+|++|+.+++++++ ++|++..+++.+|.+|
T Consensus 3 ~a~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~la~~~ 63 (115)
T 2kat_A 3 AITERLEAMLAQGTDN---------------MLLRFTLGKTYAEHEQFDAALPHLRAALD----FDPTYSVAWKWLGKTL 63 (115)
T ss_dssp CHHHHHHHHHTTTCCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHH----HCCCcHHHHHHHHHHH
Confidence 5788899999876554 57899999999999999999999999998 8999999999999999
Q ss_pred HhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHH
Q psy8368 253 IGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQ 293 (372)
Q Consensus 253 ~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~ 293 (372)
..+|++++|+..|+++++++|.+.. ......+..+...+.
T Consensus 64 ~~~g~~~~A~~~~~~al~~~~~~~~-~~~~~~l~~~l~~l~ 103 (115)
T 2kat_A 64 QGQGDRAGARQAWESGLAAAQSRGD-QQVVKELQVFLRRLA 103 (115)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHTC-HHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhcccccc-HHHHHHHHHHHHHhc
Confidence 9999999999999999999985430 044444444444443
No 113
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.20 E-value=2.2e-10 Score=112.05 Aligned_cols=106 Identities=24% Similarity=0.281 Sum_probs=99.2
Q ss_pred HHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy8368 151 VLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKA 230 (372)
Q Consensus 151 ~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~a 230 (372)
..+.+..++..|+.+++.|+|.+|+..|++++...+. ..++.++|.||+++|+|++|+.+++++
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~la~~~~~~g~~~~A~~~~~~a 65 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKED----------------PVFYSNLSACYVSVGDLKKVVEMSTKA 65 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC----------------HHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc----------------HHHHHhHHHHHHHHhhHHHHHHHHHHH
Confidence 3577899999999999999999999999999998642 478999999999999999999999999
Q ss_pred HHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 231 LQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 231 L~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
++ .+|++..+++.+|.+|..+|++++|+..|.++++++|.+.
T Consensus 66 l~----~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 107 (514)
T 2gw1_A 66 LE----LKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFND 107 (514)
T ss_dssp HH----HCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCG
T ss_pred hc----cChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCcc
Confidence 98 8999999999999999999999999999999999999765
No 114
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.20 E-value=2.9e-10 Score=101.93 Aligned_cols=103 Identities=10% Similarity=0.041 Sum_probs=48.5
Q ss_pred HHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccC
Q psy8368 158 LGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHF 237 (372)
Q Consensus 158 ~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~ 237 (372)
+...|..++..|+|.+|+..|.+++. .+..+.. ...++.++|.+|..+|+|++|+.+++++++ .
T Consensus 40 ~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~-----------~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~----~ 103 (272)
T 3u4t_A 40 YNRRAVCYYELAKYDLAQKDIETYFS-KVNATKA-----------KSADFEYYGKILMKKGQDSLAIQQYQAAVD----R 103 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTC-----------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----H
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhH-----------HHHHHHHHHHHHHHcccHHHHHHHHHHHHh----c
Confidence 44444455555555555555555554 2211100 023344455555555555555555555554 4
Q ss_pred CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 238 ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 238 ~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
+|.+..+++.+|.+|..+|++++|+..|+++++++|.+.
T Consensus 104 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~ 142 (272)
T 3u4t_A 104 DTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDP 142 (272)
T ss_dssp STTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCH
T ss_pred CcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcH
Confidence 444444555555555555555555555555555555444
No 115
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.20 E-value=3.2e-11 Score=100.44 Aligned_cols=65 Identities=20% Similarity=0.219 Sum_probs=59.7
Q ss_pred CCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEEEEEecCCCccCCCC
Q psy8368 29 PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKSDFFASYELCFGALG 101 (372)
Q Consensus 29 ~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~~i~~~~~yg~~g 101 (372)
++.||.|+++|+++ .+ |++|||++ ++|.+|.+.++|||+.+|.+|++|++..|.|||+.+||..+
T Consensus 3 i~~gd~V~v~Y~g~-~d-G~~fdss~------~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~ 67 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VE-GEVLDQGE------LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHD 67 (158)
T ss_dssp CCTTEEEEEEEEEE-ET-TEEEEEEE------EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCC
T ss_pred CCCCCEEEEEEEEE-EC-CEEEEeeE------EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCC
Confidence 57899999999999 55 56999984 78999999999999999999999999999999999999865
No 116
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.20 E-value=1.6e-10 Score=103.67 Aligned_cols=133 Identities=17% Similarity=0.136 Sum_probs=110.9
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhc
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFAS 235 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~ 235 (372)
..+...|..++..|+|++|+..|.+++...+.. ..++.++|.||..+|+|++|+.+++++++ ..
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~ 67 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNS---------------PYIYNRRAVCYYELAKYDLAQKDIETYFS-KV 67 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCC---------------STTHHHHHHHHHHTTCHHHHHHHHHHHHT-TS
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHHhhHHHHHHHHHHHHh-cc
Confidence 346678999999999999999999999986654 35788999999999999999999999996 11
Q ss_pred cCCCC-chhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q psy8368 236 HFATK-DVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSS 309 (372)
Q Consensus 236 ~~~p~-~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (372)
.++. ...+++.+|.+|..+|++++|+..|+++++++|++. .+...++.+....+++.++ ...+.+.+..
T Consensus 68 -~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~---~~~~~l~~~~~~~~~~~~A-~~~~~~al~~ 137 (272)
T 3u4t_A 68 -NATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRL---DMYGQIGSYFYNKGNFPLA-IQYMEKQIRP 137 (272)
T ss_dssp -CTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT---HHHHHHHHHHHHTTCHHHH-HHHHGGGCCS
T ss_pred -CchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccH---HHHHHHHHHHHHccCHHHH-HHHHHHHhhc
Confidence 2222 355799999999999999999999999999999999 9999999999888877543 4455555444
No 117
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.19 E-value=4.6e-10 Score=97.09 Aligned_cols=120 Identities=13% Similarity=-0.034 Sum_probs=69.2
Q ss_pred HHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHc-cCHHHHHHHHHHHHHhhc
Q psy8368 157 ELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNN-KQYKLTCDCASKALQFAS 235 (372)
Q Consensus 157 ~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl-~~y~~Ai~~~~~aL~~~~ 235 (372)
.+...|..++..|++.+|+..|.+++...+.. ..++.++|.+|..+ |++++|+..++++++ .
T Consensus 44 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~--~ 106 (225)
T 2vq2_A 44 AWLVRAEIYQYLKVNDKAQESFRQALSIKPDS---------------AEINNNYGWFLCGRLNRPAESMAYFDKALA--D 106 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHTTTCCHHHHHHHHHHHHT--S
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHhcCcHHHHHHHHHHHHc--C
Confidence 34444455555555555555555555443322 34556666666666 666666666666663 1
Q ss_pred cCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHH
Q psy8368 236 HFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQ 296 (372)
Q Consensus 236 ~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~ 296 (372)
..+|.+..+++.+|.++..+|++++|+..|.++++.+|++. .+...++.+....+++.
T Consensus 107 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~---~~~~~la~~~~~~~~~~ 164 (225)
T 2vq2_A 107 PTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFP---PAFKELARTKMLAGQLG 164 (225)
T ss_dssp TTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH---HHHHHHHHHHHHHTCHH
T ss_pred cCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCc---hHHHHHHHHHHHcCCHH
Confidence 13344566666666666666666666666666666666666 66666666655555443
No 118
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.18 E-value=2e-11 Score=125.74 Aligned_cols=114 Identities=7% Similarity=-0.057 Sum_probs=105.3
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
...+...|..++..|+|++|+..|++|+++.+.. ..+++|+|.||.++|+|++ +.+|+++++
T Consensus 467 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~---------------~~~~~~lg~~~~~~g~~~~-~~~~~~al~-- 528 (681)
T 2pzi_A 467 WRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGE---------------LAPKLALAATAELAGNTDE-HKFYQTVWS-- 528 (681)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC---------------SHHHHHHHHHHHHHTCCCT-TCHHHHHHH--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHcCChHH-HHHHHHHHH--
Confidence 4567789999999999999999999999997765 5789999999999999999 999999998
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHH
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLG 291 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~ 291 (372)
++|++..+++++|.+|..+|++++|+.+|++|++++|++. .++..++.+...
T Consensus 529 --~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~---~a~~~~~~~~~~ 580 (681)
T 2pzi_A 529 --TNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFT---TARLTSAVTLLS 580 (681)
T ss_dssp --HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHH---HHHHHHHHHTC-
T ss_pred --hCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccH---HHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999 888888887643
No 119
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.17 E-value=5.5e-10 Score=107.64 Aligned_cols=122 Identities=20% Similarity=0.251 Sum_probs=107.1
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
.......|..++..|++.+|+..|.+++...+..+ .....++.++|.++.++|++++|+.+++++++
T Consensus 257 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~-----------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~-- 323 (450)
T 2y4t_A 257 LNKLIESAEELIRDGRYTDATSKYESVMKTEPSIA-----------EYTVRSKERICHCFSKDEKPVEAIRVCSEVLQ-- 323 (450)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSH-----------HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcch-----------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH--
Confidence 34456669999999999999999999999754421 12246899999999999999999999999998
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHH
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQ 294 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~ 294 (372)
++|++..+++.+|.+|..+|++++|+.+|+++++++|++. .+...+..+....+.
T Consensus 324 --~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~l~~~~~~~~~ 378 (450)
T 2y4t_A 324 --MEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQ---QIREGLEKAQRLLKQ 378 (450)
T ss_dssp --HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCH---HHHHHHHHHHHHHHH
T ss_pred --hCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchH---HHHHHHHHHHHHhhc
Confidence 8999999999999999999999999999999999999999 999999888776554
No 120
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.17 E-value=6.8e-10 Score=98.40 Aligned_cols=135 Identities=14% Similarity=0.105 Sum_probs=97.9
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
...+...|..++..|++.+|+..|.+++...+.. ..++.++|.+|..+|++++|+.+++++++
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~la~~~~~~g~~~~A~~~~~~~~~-- 133 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALASDSRN---------------ARVLNNYGGFLYEQKRYEEAYQRLLEASQ-- 133 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc---------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHh--
Confidence 3455666777777777777777777777664432 46778888888888888888888888874
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSSS 310 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (372)
...+|.+..+++.+|.+|..+|++++|+..|+++++++|.+. .+...++.+....+++.+ ....+.+++...
T Consensus 134 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~---~~~~~la~~~~~~g~~~~-A~~~~~~~~~~~ 205 (252)
T 2ho1_A 134 DTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQP---SVALEMADLLYKEREYVP-ARQYYDLFAQGG 205 (252)
T ss_dssp CTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH---HHHHHHHHHHHHTTCHHH-HHHHHHHHHTTS
T ss_pred CccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccH---HHHHHHHHHHHHcCCHHH-HHHHHHHHHHhC
Confidence 114677788888888888888888888888888888888888 788888877777666543 334555555433
No 121
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.17 E-value=3.3e-10 Score=103.96 Aligned_cols=122 Identities=9% Similarity=-0.068 Sum_probs=95.5
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
...+...|..++..|++.+|+..|++++...|.. ..++.++|.+|+.+|++++|+..+++++...
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~---------------~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~ 181 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQN---------------GEIGLLLAETLIALNRSEDAEAVLXTIPLQD 181 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSC---------------HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGG
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcc---------------hhHHHHHHHHHHHCCCHHHHHHHHHhCchhh
Confidence 4678899999999999999999999999997765 5678888888888888888776666553200
Q ss_pred ------------------------------ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCC--ccHHHHH
Q psy8368 235 ------------------------------SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKD--SVRAEID 282 (372)
Q Consensus 235 ------------------------------~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~--~~~~~~~ 282 (372)
-..+|++..+++.+|.+|...|++++|+..|.++++++|++ . .++
T Consensus 182 p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~---~a~ 258 (287)
T 3qou_A 182 QDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADG---QTR 258 (287)
T ss_dssp CSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGG---HHH
T ss_pred cchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccc---hHH
Confidence 01578888888888888888888888888888888888887 6 677
Q ss_pred HHHHHHHHHHHH
Q psy8368 283 KEILKADLGNQQ 294 (372)
Q Consensus 283 ~~l~~~~~~~~~ 294 (372)
..+..+...++.
T Consensus 259 ~~l~~~~~~~g~ 270 (287)
T 3qou_A 259 XTFQEILAALGT 270 (287)
T ss_dssp HHHHHHHHHHCT
T ss_pred HHHHHHHHHcCC
Confidence 777777665544
No 122
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.17 E-value=4.3e-10 Score=103.53 Aligned_cols=135 Identities=7% Similarity=-0.001 Sum_probs=99.3
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHH----HHccCHHHHHHHHHHH
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCY----NNNKQYKLTCDCASKA 230 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~----~kl~~y~~Ai~~~~~a 230 (372)
...+...|..+.+.|++++|+..|++++...+.. ...+++.++ ...|++++|+..++++
T Consensus 130 ~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~-----------------~~~~l~~a~~~l~~~~~~~~eA~~~~~~~ 192 (291)
T 3mkr_A 130 LECMAMTVQILLKLDRLDLARKELKKMQDQDEDA-----------------TLTQLATAWVSLAAGGEKLQDAYYIFQEM 192 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----------------HHHHHHHHHHHHHHCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCc-----------------HHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 3456667778888888888888888887764322 122333332 3348899999999999
Q ss_pred HHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q psy8368 231 LQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSSS 310 (372)
Q Consensus 231 L~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (372)
++ .+|+++.+++.+|.++..+|++++|+..|+++++++|+++ .+...+..+....++..+.....+.++....
T Consensus 193 l~----~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~---~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~ 265 (291)
T 3mkr_A 193 AD----KCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHP---ETLINLVVLSQHLGKPPEVTNRYLSQLKDAH 265 (291)
T ss_dssp HH----HSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC
T ss_pred HH----hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHcCCCHHHHHHHHHHHHHhC
Confidence 87 7888999999999999999999999999999999999998 8888888777776665554555555555444
Q ss_pred CCC
Q psy8368 311 SSP 313 (372)
Q Consensus 311 ~~~ 313 (372)
+..
T Consensus 266 P~~ 268 (291)
T 3mkr_A 266 RSH 268 (291)
T ss_dssp TTC
T ss_pred CCC
Confidence 443
No 123
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.17 E-value=4.4e-10 Score=103.01 Aligned_cols=121 Identities=17% Similarity=0.092 Sum_probs=108.0
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
...+...|..++..|++++|+..|.+++...+.. ..++.++|.+|..+|++++|+..++++++
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-- 234 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVELRPDD---------------AQLWNKLGATLANGNRPQEALDAYNRALD-- 234 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--
Confidence 4667889999999999999999999999986554 56889999999999999999999999998
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC------------CccHHHHHHHHHHHHHHHHHHHH
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAK------------DSVRAEIDKEILKADLGNQQYQK 297 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~------------~~~~~~~~~~l~~~~~~~~~~~~ 297 (372)
.+|++..+++.+|.+|..+|++++|+..|+++++++|+ +. .+...+..+....++...
T Consensus 235 --~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~g~~~~ 304 (327)
T 3cv0_A 235 --INPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATR---SMWDFFRMLLNVMNRPDL 304 (327)
T ss_dssp --HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHH---HHHHHHHHHHHHTTCHHH
T ss_pred --cCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCH---HHHHHHHHHHHhcCCHHH
Confidence 88999999999999999999999999999999999999 56 788888888777666544
No 124
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.17 E-value=1.2e-10 Score=94.96 Aligned_cols=96 Identities=7% Similarity=0.016 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDK 283 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~ 283 (372)
...++++|.++++.|+|++|+..+++++. .+|+++.+|+.+|.+|..+|++++|+.+|++++.++|++. .+..
T Consensus 18 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---~~~~ 90 (142)
T 2xcb_A 18 LEQLYALGFNQYQAGKWDDAQKIFQALCM----LDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEP---RFPF 90 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT---HHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHH----hCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc---HHHH
Confidence 56788999999999999999999999998 9999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q psy8368 284 EILKADLGNQQYQKETKARCMKMF 307 (372)
Q Consensus 284 ~l~~~~~~~~~~~~~~~~~~~~~~ 307 (372)
.++.+....+++.++. ..|.+.+
T Consensus 91 ~lg~~~~~~g~~~~A~-~~~~~al 113 (142)
T 2xcb_A 91 HAAECHLQLGDLDGAE-SGFYSAR 113 (142)
T ss_dssp HHHHHHHHTTCHHHHH-HHHHHHH
T ss_pred HHHHHHHHcCCHHHHH-HHHHHHH
Confidence 9999988887765433 3444443
No 125
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.16 E-value=9e-10 Score=95.23 Aligned_cols=122 Identities=11% Similarity=-0.017 Sum_probs=94.9
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+..+...|..++..|++.+|+..|.+++...+.. ..++.++|.+|..+|++++|+..++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~- 70 (225)
T 2vq2_A 7 VSNIKTQLAMEYMRGQDYRQATASIEDALKSDPKN---------------ELAWLVRAEIYQYLKVNDKAQESFRQALS- 70 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccc---------------hHHHHHHHHHHHHcCChHHHHHHHHHHHH-
Confidence 45667778888888888888888888888876543 46778888888888888888888888887
Q ss_pred hccCCCCchhHHHHHHHHHHhc-CCHHHHHHHHHHHHh--hcCCCccHHHHHHHHHHHHHHHHHHHH
Q psy8368 234 ASHFATKDVKLFFVWGKALIGL-QEWTSAIKHLKTARK--LAAKDSVRAEIDKEILKADLGNQQYQK 297 (372)
Q Consensus 234 ~~~~~p~~~ka~~r~a~a~~~l-~~~e~A~~~~~~al~--l~p~~~~~~~~~~~l~~~~~~~~~~~~ 297 (372)
.+|.+..+++.+|.+|..+ |++++|+..|+++++ .+|.+. .+...++.+....+++.+
T Consensus 71 ---~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~ 131 (225)
T 2vq2_A 71 ---IKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPY---IANLNKGICSAKQGQFGL 131 (225)
T ss_dssp ---HCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHH---HHHHHHHHHHHHTTCHHH
T ss_pred ---hCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchH---HHHHHHHHHHHHcCCHHH
Confidence 7788888888888888888 888888888888888 445545 677777776666555543
No 126
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.16 E-value=3e-10 Score=104.31 Aligned_cols=148 Identities=12% Similarity=0.014 Sum_probs=108.7
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHc-cCHHHHHHHHHHHHH
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNN-KQYKLTCDCASKALQ 232 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl-~~y~~Ai~~~~~aL~ 232 (372)
.+..+.+.|+.+...|+|++|+.+|.+|+.+.+..... .....++.|+|.+|... |+|++|+.++++|++
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~---------~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~ 146 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQF---------RRGANFKFELGEILENDLHDYAKAIDCYELAGE 146 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCH---------HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Confidence 36788889999999999999999999999887543210 11256899999999995 999999999999998
Q ss_pred hhccCCCC--chhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCcc----HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8368 233 FASHFATK--DVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSV----RAEIDKEILKADLGNQQYQKETKARCMKM 306 (372)
Q Consensus 233 ~~~~~~p~--~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (372)
+.+..+.. ...++.++|.+|..+|+|++|+.+|++++++.|++.. ...+...+..+....+++. .....|.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~-~A~~~~~~a 225 (292)
T 1qqe_A 147 WYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAV-AAARTLQEG 225 (292)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHH-HHHHHHHGG
T ss_pred HHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHH
Confidence 43322111 1567999999999999999999999999999998761 1124455666666665553 344456665
Q ss_pred ccCCC
Q psy8368 307 FSSSS 311 (372)
Q Consensus 307 ~~~~~ 311 (372)
....+
T Consensus 226 l~l~p 230 (292)
T 1qqe_A 226 QSEDP 230 (292)
T ss_dssp GCC--
T ss_pred HhhCC
Confidence 55443
No 127
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.16 E-value=8.2e-10 Score=101.33 Aligned_cols=154 Identities=14% Similarity=0.043 Sum_probs=110.7
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCC------------C-hHHHHHHHHH------HHHHHHHHHHHHHH
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVT------------N-YEDQMQLEEY------LCRVYRNLMVCYNN 216 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~------------~-~~~~~~~~~l------~~~l~~Nla~~~~k 216 (372)
..+...|..++..|++.+|+..|.+++...+..... . +.....+... ...++.++|.+|..
T Consensus 126 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~ 205 (330)
T 3hym_B 126 PAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQ 205 (330)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 445566666666666666666666666654332100 0 0000111111 14688999999999
Q ss_pred ccCHHHHHHHHHHHHHhhccCC-----CCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHH
Q psy8368 217 NKQYKLTCDCASKALQFASHFA-----TKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLG 291 (372)
Q Consensus 217 l~~y~~Ai~~~~~aL~~~~~~~-----p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~ 291 (372)
+|+|++|+.+++++++..+... |.+..+++.+|.+|..+|++++|+..|+++++++|++. .+...++.+...
T Consensus 206 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~---~~~~~la~~~~~ 282 (330)
T 3hym_B 206 NGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNA---STYSAIGYIHSL 282 (330)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCS---HHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccch---HHHHHHHHHHHH
Confidence 9999999999999998432211 66788999999999999999999999999999999999 999999999888
Q ss_pred HHHHHHHHHHHHHhhccCCCCC
Q psy8368 292 NQQYQKETKARCMKMFSSSSSP 313 (372)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~ 313 (372)
.+++. .....+.+.+...+..
T Consensus 283 ~g~~~-~A~~~~~~al~~~p~~ 303 (330)
T 3hym_B 283 MGNFE-NAVDYFHTALGLRRDD 303 (330)
T ss_dssp HTCHH-HHHHHHHTTTTTCSCC
T ss_pred hccHH-HHHHHHHHHHccCCCc
Confidence 87765 4456677776655543
No 128
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.16 E-value=7.2e-10 Score=87.25 Aligned_cols=102 Identities=19% Similarity=0.308 Sum_probs=92.6
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
...+...|..++..|++.+|+..|.+++...+.. ..++.++|.++...|++++|+..++++++
T Consensus 35 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~-- 97 (136)
T 2fo7_A 35 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALE-- 97 (136)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHTTTCHHHHHHHHHHHHH--
T ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc---------------hHHHHHHHHHHHHhcCHHHHHHHHHHHHH--
Confidence 3456778999999999999999999999876543 46788999999999999999999999998
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCC
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKD 275 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~ 275 (372)
..|.+..+++.+|.+|..+|++++|+..|.+++.++|++
T Consensus 98 --~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 98 --LDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp --HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred --hCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 889999999999999999999999999999999999864
No 129
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.16 E-value=5.6e-10 Score=88.73 Aligned_cols=96 Identities=13% Similarity=-0.027 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHH
Q psy8368 206 VYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEI 285 (372)
Q Consensus 206 l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l 285 (372)
.++++|.++++.|+|.+|+..++++++ .+|+++.+|+.+|.++..+|++++|+..|++|++++|++. .++..+
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~----~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~---~~~~~l 91 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQ----KEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDI---AVHAAL 91 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHH----HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHH----HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHH
Confidence 467899999999999999999999998 9999999999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccC
Q psy8368 286 LKADLGNQQYQKETKARCMKMFSS 309 (372)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~ 309 (372)
+.+....+++.++ ...+.+.+..
T Consensus 92 a~~~~~~g~~~~A-~~~~~~al~~ 114 (121)
T 1hxi_A 92 AVSHTNEHNANAA-LASLRAWLLS 114 (121)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHC-
T ss_pred HHHHHHcCCHHHH-HHHHHHHHHh
Confidence 9999888877543 3455555443
No 130
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.15 E-value=4.3e-10 Score=89.26 Aligned_cols=95 Identities=13% Similarity=0.051 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDK 283 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~ 283 (372)
...+.++|.++++.|+|++|+..++++++ ++|+++.+++++|.+|..+|++++|+.+|+++++++|++. .+..
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~----~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~ 76 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIK----RAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFV---RAYI 76 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHH----hCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH---HHHH
Confidence 56788999999999999999999999998 8999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q psy8368 284 EILKADLGNQQYQKETKARCMKM 306 (372)
Q Consensus 284 ~l~~~~~~~~~~~~~~~~~~~~~ 306 (372)
.++.+....+++.++ ...+.+.
T Consensus 77 ~lg~~~~~~~~~~~A-~~~~~~a 98 (126)
T 3upv_A 77 RKATAQIAVKEYASA-LETLDAA 98 (126)
T ss_dssp HHHHHHHHTTCHHHH-HHHHHHH
T ss_pred HHHHHHHHHhCHHHH-HHHHHHH
Confidence 999998887776543 3334443
No 131
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.15 E-value=3.4e-10 Score=100.34 Aligned_cols=123 Identities=16% Similarity=0.163 Sum_probs=110.1
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..+..+...|..++..|+|.+|+..|.+++...+.. ..++.++|.+|..+|++++|+..++++++
T Consensus 35 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 99 (252)
T 2ho1_A 35 EARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSS---------------ADAHAALAVVFQTEMEPKLADEEYRKALA 99 (252)
T ss_dssp HHHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCCh---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 347889999999999999999999999999986544 57899999999999999999999999998
Q ss_pred hhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHh--hcCCCccHHHHHHHHHHHHHHHHHHHH
Q psy8368 233 FASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARK--LAAKDSVRAEIDKEILKADLGNQQYQK 297 (372)
Q Consensus 233 ~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~--l~p~~~~~~~~~~~l~~~~~~~~~~~~ 297 (372)
.+|.+..+++.+|.+|..+|++++|+..|++++. ..|.+. .+...++.+....++..+
T Consensus 100 ----~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~---~~~~~la~~~~~~g~~~~ 159 (252)
T 2ho1_A 100 ----SDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERS---RVFENLGLVSLQMKKPAQ 159 (252)
T ss_dssp ----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHH---HHHHHHHHHHHHTTCHHH
T ss_pred ----HCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccH---HHHHHHHHHHHHcCCHHH
Confidence 8899999999999999999999999999999999 778777 888888887776665543
No 132
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.14 E-value=6.7e-11 Score=113.24 Aligned_cols=97 Identities=14% Similarity=0.245 Sum_probs=80.0
Q ss_pred CCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEEEEEecCCCccCCCCCCCCCC
Q psy8368 28 NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKSDFFASYELCFGALGCPPRIP 107 (372)
Q Consensus 28 ~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~~i~~~~~yg~~g~~~~ip 107 (372)
.+..||.|++||+++. + |+.|+++. .. |+.|.+|.|.++|||+.+|.||++|++..|.+++...|+..+.
T Consensus 160 ~~~~gD~V~i~y~g~~-d-G~~fd~~~--~~-~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l----- 229 (392)
T 1t11_A 160 AAENGKRVSIDFVGSI-D-GVEFEGGK--AE-NFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL----- 229 (392)
T ss_dssp CCCTTCEEEEEEEEES-S-SSCCTTCE--EE-EEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT-----
T ss_pred CCCCCCEEEEEEEEEE-C-CEEccCCC--cc-ceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCC-----
Confidence 4889999999999984 4 55899873 34 8999999999999999999999999999999986667776543
Q ss_pred CCCcEEEEEEEEeeecCccccccccccccccc
Q psy8368 108 AKADLLFEVHLINFSIDPQVVRSSADIESDFI 139 (372)
Q Consensus 108 ~~~~~~~~iel~~~~~~~~~~~~~~~~~~~~~ 139 (372)
+|.+++|.|+|.++. . ..++++.+.|.
T Consensus 230 aGk~~~F~V~v~~i~-~----~~lpeldDEfa 256 (392)
T 1t11_A 230 KGKAAKFAIKVNKVE-A----RELPELNDEFV 256 (392)
T ss_dssp SSCEEEECCCEEEEE-E----EECCCCSTGGG
T ss_pred CCCeEEEEEEEEEEE-c----CCCCCcCHHHH
Confidence 688999999999998 2 34555555554
No 133
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.14 E-value=3.5e-10 Score=101.19 Aligned_cols=136 Identities=14% Similarity=0.086 Sum_probs=110.7
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..+..+...|..++..|+|.+|+..|.+++.........+. .....++.++|.+|..+|+|++|+.++.++++
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 113 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDH-------PAVAATLNNLAVLYGKRGKYKEAEPLCKRALE 113 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTC-------HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcc-------hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 35677889999999999999999999999998643211111 12367899999999999999999999999998
Q ss_pred hhccC----CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhh--------cCCCccHHHHHHHHHHHHHHHHHHHHH
Q psy8368 233 FASHF----ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKL--------AAKDSVRAEIDKEILKADLGNQQYQKE 298 (372)
Q Consensus 233 ~~~~~----~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l--------~p~~~~~~~~~~~l~~~~~~~~~~~~~ 298 (372)
+.... +|....+++++|.+|..+|++++|+..|++++++ +|... .+...++.+....+++.++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~---~~~~~la~~~~~~g~~~~A 188 (283)
T 3edt_B 114 IREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVA---KTKNNLASCYLKQGKYQDA 188 (283)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHH---HHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHH---HHHHHHHHHHHHcCCHHHH
Confidence 43221 5778899999999999999999999999999999 55555 7888888888777766543
No 134
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.14 E-value=1.1e-09 Score=96.41 Aligned_cols=137 Identities=7% Similarity=-0.069 Sum_probs=110.6
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHH------------------
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNN------------------ 216 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~k------------------ 216 (372)
...+...|..+++.|+|.+|+..|.++++..|..+. ...+++++|.|+.+
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~------------~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 108 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPN------------IDYVMYMRGLTNMALDDSALQGFFGVDRSDRD 108 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT------------HHHHHHHHHHHHHHHHC--------------C
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCc------------HHHHHHHHHHHHHhhhhhhhhhhhccchhhcC
Confidence 357888999999999999999999999998766421 02356777777775
Q ss_pred ccCHHHHHHHHHHHHHhhccCCCCchhHH-----------------HHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHH
Q psy8368 217 NKQYKLTCDCASKALQFASHFATKDVKLF-----------------FVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRA 279 (372)
Q Consensus 217 l~~y~~Ai~~~~~aL~~~~~~~p~~~ka~-----------------~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~ 279 (372)
+|++++|+..++++++ ..|++..++ +.+|.+|...|++++|+..|+++++..|+++...
T Consensus 109 ~~~~~~A~~~~~~~l~----~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 184 (225)
T 2yhc_A 109 PQQARAAFSDFSKLVR----GYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATR 184 (225)
T ss_dssp CHHHHHHHHHHHHHHT----TCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHH
T ss_pred cHHHHHHHHHHHHHHH----HCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccH
Confidence 6799999999999997 889987665 6789999999999999999999999999987445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy8368 280 EIDKEILKADLGNQQYQKETKARCMKMFS 308 (372)
Q Consensus 280 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 308 (372)
.+...++.+...++...++ ...++.+..
T Consensus 185 ~a~~~l~~~~~~~g~~~~A-~~~~~~l~~ 212 (225)
T 2yhc_A 185 DALPLMENAYRQMQMNAQA-EKVAKIIAA 212 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcHHH-HHHHHHHHh
Confidence 6788888888877776554 344444443
No 135
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.13 E-value=6.2e-10 Score=94.08 Aligned_cols=119 Identities=12% Similarity=0.018 Sum_probs=80.8
Q ss_pred HHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhc-
Q psy8368 157 ELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFAS- 235 (372)
Q Consensus 157 ~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~- 235 (372)
.+...|..++..|++.+|+..|++++...|.. ..++.++|.+|..+|++++|+..+++++...+
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~---------------~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~ 72 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLSDELQSR---------------GDVKLAKADCLLETKQFELAQELLATIPLEYQD 72 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSCHHHHTS---------------HHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCc---------------HHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCC
Confidence 45667888888999999999999999887665 56778888888888888888777666554100
Q ss_pred -----------------------------cCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCC--ccHHHHHHH
Q psy8368 236 -----------------------------HFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKD--SVRAEIDKE 284 (372)
Q Consensus 236 -----------------------------~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~--~~~~~~~~~ 284 (372)
..+|+++.+++.+|.++..+|++++|+..|+++++++|++ . .++..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~---~a~~~ 149 (176)
T 2r5s_A 73 NSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDG---EVKKT 149 (176)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTT---HHHHH
T ss_pred hHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChH---HHHHH
Confidence 1356666666666666666666666666666666666654 3 35555
Q ss_pred HHHHHHHHH
Q psy8368 285 ILKADLGNQ 293 (372)
Q Consensus 285 l~~~~~~~~ 293 (372)
+..+....+
T Consensus 150 l~~~~~~~g 158 (176)
T 2r5s_A 150 FMDILSALG 158 (176)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 555544443
No 136
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.13 E-value=2.6e-09 Score=105.42 Aligned_cols=148 Identities=6% Similarity=0.025 Sum_probs=119.7
Q ss_pred hhHHHHHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHH
Q psy8368 146 PAFAKVLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCD 225 (372)
Q Consensus 146 ~~~~~~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~ 225 (372)
..+.+++..+....+.+..+..+|+|++|+..|.++|......-.++.. ..+..++|+|.+|..+|+|++|+.
T Consensus 300 e~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp-------~~a~~~~nLa~~y~~~g~~~eA~~ 372 (490)
T 3n71_A 300 EVVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNL-------YVLRLLSIASEVLSYLQAYEEASH 372 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSH-------HHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCH-------HHHHHHHHHHHHHHHhcCHHHHHH
Confidence 3445667778888889999999999999999999999987654333221 236889999999999999999999
Q ss_pred HHHHHHHhhc-cCCC---CchhHHHHHHHHHHhcCCHHHHHHHHHHHHhh-----cCCCccHHHHHHHHHHHHHHHHHHH
Q psy8368 226 CASKALQFAS-HFAT---KDVKLFFVWGKALIGLQEWTSAIKHLKTARKL-----AAKDSVRAEIDKEILKADLGNQQYQ 296 (372)
Q Consensus 226 ~~~~aL~~~~-~~~p---~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l-----~p~~~~~~~~~~~l~~~~~~~~~~~ 296 (372)
+++++|.+.. .+.| +-..++.++|.+|..+|+|++|+..|++|+++ -|+++..+++...+..++..++.++
T Consensus 373 ~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~ 452 (490)
T 3n71_A 373 YARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFR 452 (490)
T ss_dssp HHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 9999997653 2344 45668999999999999999999999999975 4788766677778888888888776
Q ss_pred HHHH
Q psy8368 297 KETK 300 (372)
Q Consensus 297 ~~~~ 300 (372)
+++.
T Consensus 453 ~ae~ 456 (490)
T 3n71_A 453 QNEF 456 (490)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6553
No 137
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.13 E-value=3e-10 Score=104.38 Aligned_cols=146 Identities=14% Similarity=0.113 Sum_probs=110.1
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
+.+..+...|+.+...|+|++|+..|.+|+.+......+ .....+++|+|.+|.++|+|++|+.++++|++
T Consensus 35 ~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~ 105 (292)
T 1qqe_A 35 EAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNE---------DEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQ 105 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 345566777889999999999999999999987543211 11257899999999999999999999999998
Q ss_pred hhccCCCC--chhHHHHHHHHHHhc-CCHHHHHHHHHHHHhhcCCCc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8368 233 FASHFATK--DVKLFFVWGKALIGL-QEWTSAIKHLKTARKLAAKDS---VRAEIDKEILKADLGNQQYQKETKARCMKM 306 (372)
Q Consensus 233 ~~~~~~p~--~~ka~~r~a~a~~~l-~~~e~A~~~~~~al~l~p~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (372)
+....... -..++.++|.+|..+ |++++|+.+|++|+++.|.+. ....+...++.+....+++.++. ..|.+.
T Consensus 106 l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~-~~~~~a 184 (292)
T 1qqe_A 106 IFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEAS-DIYSKL 184 (292)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH-HHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHH-HHHHHH
Confidence 54322111 256899999999995 999999999999999998652 11256777787777777665443 344444
Q ss_pred cc
Q psy8368 307 FS 308 (372)
Q Consensus 307 ~~ 308 (372)
..
T Consensus 185 l~ 186 (292)
T 1qqe_A 185 IK 186 (292)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 138
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.13 E-value=1.1e-09 Score=102.38 Aligned_cols=144 Identities=16% Similarity=0.065 Sum_probs=109.8
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCCh----------------------------HHHHHHHHH----
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNY----------------------------EDQMQLEEY---- 202 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~----------------------------~~~~~~~~l---- 202 (372)
...+...|..+...|++.+|+..|.+++...+....... .....+...
T Consensus 132 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~ 211 (368)
T 1fch_A 132 QTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLD 211 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhC
Confidence 345666777777788888888888877776544321110 000000110
Q ss_pred ----HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccH
Q psy8368 203 ----LCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVR 278 (372)
Q Consensus 203 ----~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~ 278 (372)
...++.++|.+|.++|+|++|+.+++++++ ++|++..+++.+|.+|..+|++++|+..|+++++++|++.
T Consensus 212 p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~----~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~-- 285 (368)
T 1fch_A 212 PTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALS----VRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYI-- 285 (368)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--
T ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH--
Confidence 256789999999999999999999999998 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8368 279 AEIDKEILKADLGNQQYQKETKARCMKM 306 (372)
Q Consensus 279 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (372)
.+...++.+....+++.++ ...+.++
T Consensus 286 -~~~~~l~~~~~~~g~~~~A-~~~~~~a 311 (368)
T 1fch_A 286 -RSRYNLGISCINLGAHREA-VEHFLEA 311 (368)
T ss_dssp -HHHHHHHHHHHHHTCHHHH-HHHHHHH
T ss_pred -HHHHHHHHHHHHCCCHHHH-HHHHHHH
Confidence 9999999988887776543 3344443
No 139
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.12 E-value=2.2e-09 Score=103.36 Aligned_cols=105 Identities=13% Similarity=0.101 Sum_probs=98.0
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..+..+...|..+++.|+|.+|+..|.+++...+.. ..+++++|.||..+|+|++|+.+++++++
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 88 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDN---------------YIAYYRRATVFLAMGKSKAALPDLTKVIQ 88 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 457788999999999999999999999999886554 67899999999999999999999999998
Q ss_pred hhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 233 FASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 233 ~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
.+|++..+++.+|.+|..+|++++|+..|+++++++|++.
T Consensus 89 ----~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 89 ----LKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp ----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHH
T ss_pred ----cCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 8999999999999999999999999999999999999875
No 140
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.12 E-value=6.9e-10 Score=101.84 Aligned_cols=121 Identities=12% Similarity=-0.022 Sum_probs=97.9
Q ss_pred HHHHHhhHHHHhcc-CHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 156 QELGASGKNAFNDK-NIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g-~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
..+...|..++..| ++++|+..|.+++...+.. ..++.++|.+|..+|+|++|+..++++++
T Consensus 91 ~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-- 153 (330)
T 3hym_B 91 VSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTY---------------GPAWIAYGHSFAVESEHDQAMAAYFTAAQ-- 153 (330)
T ss_dssp HHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTC---------------THHHHHHHHHHHHHTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHH--
Confidence 45667778888888 7888888888888775543 45688888889899999999999998887
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHH
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKE 298 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~ 298 (372)
..|++..+++.+|.+|..+|++++|+..|+++++++|++. .+...++.+....+++.++
T Consensus 154 --~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~---~~~~~l~~~~~~~~~~~~A 212 (330)
T 3hym_B 154 --LMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDP---FVMHEVGVVAFQNGEWKTA 212 (330)
T ss_dssp --HTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCH---HHHHHHHHHHHHTTCHHHH
T ss_pred --hccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCh---HHHHHHHHHHHHcccHHHH
Confidence 7888888888899999999999999999999999988888 8888888877766665443
No 141
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.11 E-value=5.9e-10 Score=85.75 Aligned_cols=68 Identities=15% Similarity=0.153 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCC
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKD 275 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~ 275 (372)
...+.++|.+++..|+|++|+..++++++ ++|+++.+++++|.+|..+|++++|+.+|+++++++|++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLIT----AQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh----cCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 46788999999999999999999999998 899999999999999999999999999999999999998
No 142
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.10 E-value=2.9e-10 Score=112.05 Aligned_cols=108 Identities=23% Similarity=0.301 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHH
Q psy8368 149 AKVLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCAS 228 (372)
Q Consensus 149 ~~~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~ 228 (372)
.+....+..+...|+.+++.|+|.+|+..|++++...+.. ..+++++|.||.++|+|++|+..|+
T Consensus 19 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~~~~~la~~~~~~g~~~~A~~~~~ 83 (537)
T 3fp2_A 19 SQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNE---------------PVFYSNISACYISTGDLEKVIEFTT 83 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCC---------------cHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3456789999999999999999999999999999987655 6889999999999999999999999
Q ss_pred HHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 229 KALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 229 ~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
++++ ++|+++.+++.+|.+|..+|++++|+..|+ ++.++|+..
T Consensus 84 ~al~----~~p~~~~~~~~la~~~~~~g~~~~A~~~~~-~~~~~~~~~ 126 (537)
T 3fp2_A 84 KALE----IKPDHSKALLRRASANESLGNFTDAMFDLS-VLSLNGDFD 126 (537)
T ss_dssp HHHH----HCTTCHHHHHHHHHHHHHHTCHHHHHHHHH-HHC------
T ss_pred HHHh----cCCchHHHHHHHHHHHHHcCCHHHHHHHHH-HHhcCCCCC
Confidence 9998 899999999999999999999999999995 999988765
No 143
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.10 E-value=1.1e-09 Score=81.12 Aligned_cols=81 Identities=19% Similarity=0.309 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDK 283 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~ 283 (372)
...+.++|.++...++|++|+.+++++++ .+|++..+++++|.+|..+|++++|+..|+++++++|++. .+..
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~----~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~---~~~~ 81 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALE----LDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA---EAKQ 81 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHh----cCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCH---HHHH
Confidence 56789999999999999999999999998 8999999999999999999999999999999999999999 8888
Q ss_pred HHHHHHHH
Q psy8368 284 EILKADLG 291 (372)
Q Consensus 284 ~l~~~~~~ 291 (372)
.++.+...
T Consensus 82 ~l~~~~~~ 89 (91)
T 1na3_A 82 NLGNAKQK 89 (91)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88777543
No 144
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.09 E-value=1.4e-09 Score=105.59 Aligned_cols=128 Identities=13% Similarity=0.014 Sum_probs=101.9
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|..++..|+|++|+..|++|+++.+....... ..-....+.|+|.+|..+|+|++|+.++++++++.
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~------~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~ 124 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQA------EIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVC 124 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGC------TTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCcccc------chHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHh
Confidence 556788999999999999999999999998754321000 00115689999999999999999999999999864
Q ss_pred cc----CCCCchhHHHHHHHHHHhc--CCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHH
Q psy8368 235 SH----FATKDVKLFFVWGKALIGL--QEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLG 291 (372)
Q Consensus 235 ~~----~~p~~~ka~~r~a~a~~~l--~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~ 291 (372)
+. ..+..+.++..+|.++..+ ++|++|+.+|++|++++|+++ .+...+..+...
T Consensus 125 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~---~~~~~~~~~~~~ 184 (472)
T 4g1t_A 125 EKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNP---EFTSGLAIASYR 184 (472)
T ss_dssp HHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCH---HHHHHHHHHHHH
T ss_pred HhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHH
Confidence 32 2445678899999887665 579999999999999999999 888777766443
No 145
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.09 E-value=5.1e-10 Score=93.09 Aligned_cols=88 Identities=13% Similarity=0.047 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCC-------chh-----HHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATK-------DVK-----LFFVWGKALIGLQEWTSAIKHLKTARKL 271 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~-------~~k-----a~~r~a~a~~~l~~~e~A~~~~~~al~l 271 (372)
...+.|+|.+++++|+|++|+..|++||+ ++|+ +.. +|+++|.|+..+|+|++|+.+|.+|+++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~----l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAME----ISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHh----hCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 56789999999999999999999999998 7777 444 9999999999999999999999999999
Q ss_pred -------cCCCccHHHHH----HHHHHHHHHHHHHHHH
Q psy8368 272 -------AAKDSVRAEID----KEILKADLGNQQYQKE 298 (372)
Q Consensus 272 -------~p~~~~~~~~~----~~l~~~~~~~~~~~~~ 298 (372)
+|++. .++ ...+.+...++++.++
T Consensus 87 ~n~~~e~~pd~~---~A~~~~~~~rG~aL~~lgr~eEA 121 (159)
T 2hr2_A 87 FNRRGELNQDEG---KLWISAVYSRALALDGLGRGAEA 121 (159)
T ss_dssp HHHHCCTTSTHH---HHHHHHHHHHHHHHHHTTCHHHH
T ss_pred hhccccCCCchH---HHHHHHHHhHHHHHHHCCCHHHH
Confidence 99999 888 8888888887777543
No 146
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.09 E-value=1e-09 Score=91.46 Aligned_cols=102 Identities=15% Similarity=0.060 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDK 283 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~ 283 (372)
...+.++|.++++.|+|++|+.+++++++ ++|++..+|+++|.+|..+|+|++|+.+|+++++++|++. .++.
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~---~~~~ 83 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALS----IAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYS---KAWS 83 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH---HHHH
Confidence 57889999999999999999999999998 8999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q psy8368 284 EILKADLGNQQYQKETKARCMKMFSSSSSP 313 (372)
Q Consensus 284 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (372)
.++.+....+++.++ ...|.+.+......
T Consensus 84 ~lg~~~~~~g~~~~A-~~~~~~al~~~p~~ 112 (164)
T 3sz7_A 84 RLGLARFDMADYKGA-KEAYEKGIEAEGNG 112 (164)
T ss_dssp HHHHHHHHTTCHHHH-HHHHHHHHHHHSSS
T ss_pred HHHHHHHHccCHHHH-HHHHHHHHHhCCCc
Confidence 999999988887644 45566655544443
No 147
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.09 E-value=8.7e-10 Score=98.66 Aligned_cols=128 Identities=11% Similarity=0.009 Sum_probs=106.6
Q ss_pred HHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhH
Q psy8368 165 AFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKL 244 (372)
Q Consensus 165 ~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka 244 (372)
+...|+|++|+..|.+++...+.. + .....++.++|.+|..+|+|++|+.+++++++ .+|++..+
T Consensus 15 ~~~~~~~~~A~~~~~~~~~~~~~~----~-------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~----~~~~~~~~ 79 (275)
T 1xnf_A 15 LQPTLQQEVILARMEQILASRALT----D-------DERAQLLYERGVLYDSLGLRALARNDFSQALA----IRPDMPEV 79 (275)
T ss_dssp CCCCHHHHHHHHHHHHHHTSSCCC----H-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCCCCHHH
T ss_pred cCccchHHHHHHHHHHHHhccccc----C-------chhHHHHHHHHHHHHHcccHHHHHHHHHHHHH----cCCCcHHH
Confidence 345689999999999999863211 0 01267899999999999999999999999998 89999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q psy8368 245 FFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSSSS 311 (372)
Q Consensus 245 ~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (372)
++.+|.+|..+|++++|+..|+++++++|++. .+...++.+....+++.+ ....+.+++...+
T Consensus 80 ~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~---~~~~~la~~~~~~g~~~~-A~~~~~~a~~~~~ 142 (275)
T 1xnf_A 80 FNYLGIYLTQAGNFDAAYEAFDSVLELDPTYN---YAHLNRGIALYYGGRDKL-AQDDLLAFYQDDP 142 (275)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT---HHHHHHHHHHHHTTCHHH-HHHHHHHHHHHCT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhcCcccc---HHHHHHHHHHHHhccHHH-HHHHHHHHHHhCC
Confidence 99999999999999999999999999999999 999999999888777654 4445555544433
No 148
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.08 E-value=2.4e-09 Score=98.53 Aligned_cols=95 Identities=8% Similarity=0.016 Sum_probs=86.3
Q ss_pred HHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCch
Q psy8368 163 KNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDV 242 (372)
Q Consensus 163 n~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ 242 (372)
+.+...|++++|+..|++++...+.. ..+++++|.|+.++|+|++|+..++++|+ .+|+++
T Consensus 174 ~l~~~~~~~~eA~~~~~~~l~~~p~~---------------~~~~~~la~~~~~~g~~~eA~~~l~~al~----~~p~~~ 234 (291)
T 3mkr_A 174 SLAAGGEKLQDAYYIFQEMADKCSPT---------------LLLLNGQAACHMAQGRWEAAEGVLQEALD----KDSGHP 234 (291)
T ss_dssp HHHHCTTHHHHHHHHHHHHHHHSCCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCH
T ss_pred HHHhCchHHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCCH
Confidence 33445689999999999999986554 68999999999999999999999999998 999999
Q ss_pred hHHHHHHHHHHhcCCHHH-HHHHHHHHHhhcCCCc
Q psy8368 243 KLFFVWGKALIGLQEWTS-AIKHLKTARKLAAKDS 276 (372)
Q Consensus 243 ka~~r~a~a~~~l~~~e~-A~~~~~~al~l~p~~~ 276 (372)
.+++++|.++..+|++.+ |..+++++++++|+++
T Consensus 235 ~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~ 269 (291)
T 3mkr_A 235 ETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHP 269 (291)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999976 5789999999999999
No 149
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.08 E-value=2.3e-09 Score=101.82 Aligned_cols=135 Identities=13% Similarity=0.048 Sum_probs=102.8
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..+..+...|..++..|++..|+..|.+|+.+.+..... ......+++|+|.+|..+|+|++|+.+++++++
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 212 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAY--------NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYS 212 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTT--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccc--------hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 356777788888888888888888888888887654211 112367899999999999999999999999998
Q ss_pred hhccCC--CCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhh-----c-CCCccHHHHHHHHHHHHHHHHHHHHH
Q psy8368 233 FASHFA--TKDVKLFFVWGKALIGLQEWTSAIKHLKTARKL-----A-AKDSVRAEIDKEILKADLGNQQYQKE 298 (372)
Q Consensus 233 ~~~~~~--p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l-----~-p~~~~~~~~~~~l~~~~~~~~~~~~~ 298 (372)
+.+..+ +....+++++|.+|..+|++++|+.+|++|+++ + |... .+...++.+....+++.++
T Consensus 213 ~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~---~~~~~l~~~~~~~g~~~~A 283 (383)
T 3ulq_A 213 MAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLP---QAYFLITQIHYKLGKIDKA 283 (383)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHH---HHHHHHHHHHHHTTCHHHH
T ss_pred HHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHH---HHHHHHHHHHHHCCCHHHH
Confidence 544332 113458999999999999999999999999995 4 5444 7777788777766665443
No 150
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.07 E-value=6e-10 Score=111.89 Aligned_cols=109 Identities=13% Similarity=-0.021 Sum_probs=83.5
Q ss_pred ccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHH
Q psy8368 168 DKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFV 247 (372)
Q Consensus 168 ~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r 247 (372)
.|++++|+..|++++...+.. ..+++++|.+|..+|+|++|+.+++++++ ++|++..++++
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~ 62 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQD---------------FVAWLMLADAELGMGDTTAGEMAVQRGLA----LHPGHPEAVAR 62 (568)
T ss_dssp -------------------CC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHT----TSTTCHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCCHHHHHH
Confidence 478999999999999886654 57899999999999999999999999997 99999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHH
Q psy8368 248 WGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKE 298 (372)
Q Consensus 248 ~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~ 298 (372)
+|.+|..+|++++|+..|+++++++|++. .+...++.+....+++.++
T Consensus 63 lg~~~~~~g~~~~A~~~~~~al~~~p~~~---~~~~~la~~~~~~g~~~~A 110 (568)
T 2vsy_A 63 LGRVRWTQQRHAEAAVLLQQASDAAPEHP---GIALWLGHALEDAGQAEAA 110 (568)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcCCCCH---HHHHHHHHHHHHcCCHHHH
Confidence 99999999999999999999999999999 9999999988887776544
No 151
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.07 E-value=8.9e-10 Score=101.00 Aligned_cols=112 Identities=15% Similarity=0.122 Sum_probs=92.8
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+..+...|..++..|+|++|+..|.+|+..+...+.. ......+++|+|.+|.++|+|++|+.++++++++
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~ 225 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN--------EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccc--------hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 35578899999999999999999999999887654221 1233679999999999999999999999999985
Q ss_pred hccCCC--CchhHHHHHHHHHHhcC-CHHHHHHHHHHHHhhcC
Q psy8368 234 ASHFAT--KDVKLFFVWGKALIGLQ-EWTSAIKHLKTARKLAA 273 (372)
Q Consensus 234 ~~~~~p--~~~ka~~r~a~a~~~l~-~~e~A~~~~~~al~l~p 273 (372)
....+. ....+|+++|.+|..+| .+++|+.+|++|+.+..
T Consensus 226 ~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~ 268 (293)
T 3u3w_A 226 SCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp HHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 543322 23789999999999999 57999999999998754
No 152
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.07 E-value=1.7e-09 Score=102.64 Aligned_cols=144 Identities=12% Similarity=0.012 Sum_probs=109.2
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..+..+...|..++..|++..|+..|.+|+.+.+..... ......+++|+|.||..+|+|++|+.++.++++
T Consensus 139 ~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~ 210 (378)
T 3q15_A 139 EKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLY--------SIRTIQSLFVIAGNYDDFKHYDKALPHLEAALE 210 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCc--------hhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 456677777888888888888888888888776543211 112367899999999999999999999999998
Q ss_pred hhccCCCC--chhHHHHHHHHHHhcCCHHHHHHHHHHHHh-----hcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy8368 233 FASHFATK--DVKLFFVWGKALIGLQEWTSAIKHLKTARK-----LAAKDSVRAEIDKEILKADLGNQQYQKETKARCMK 305 (372)
Q Consensus 233 ~~~~~~p~--~~ka~~r~a~a~~~l~~~e~A~~~~~~al~-----l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 305 (372)
+....+.. ...+++++|.+|..+|++++|+.+|++|+. .+|... .+...++.+....+++.++ ...+.+
T Consensus 211 ~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~---~~~~~la~~~~~~g~~~~A-~~~~~~ 286 (378)
T 3q15_A 211 LAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLP---KVLFGLSWTLCKAGQTQKA-FQFIEE 286 (378)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHH---HHHHHHHHHHHHTTCHHHH-HHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHH---HHHHHHHHHHHHCCCHHHH-HHHHHH
Confidence 65443322 456899999999999999999999999999 566555 8888888888887776543 344444
Q ss_pred hcc
Q psy8368 306 MFS 308 (372)
Q Consensus 306 ~~~ 308 (372)
.+.
T Consensus 287 al~ 289 (378)
T 3q15_A 287 GLD 289 (378)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 153
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.07 E-value=1.2e-09 Score=100.20 Aligned_cols=143 Identities=10% Similarity=0.012 Sum_probs=109.6
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|..++..++|.+|+..|.+|+.+........ ....+++|+|.+|..+|+|++|+.+++++++..
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~---------~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVY---------QNLYIENAIANIYAENGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTT---------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHH---------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 44555689999999999999999999999654322111 125689999999999999999999999999755
Q ss_pred ccC---CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8368 235 SHF---ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS---VRAEIDKEILKADLGNQQYQKETKARCMKM 306 (372)
Q Consensus 235 ~~~---~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (372)
... .+....+++++|.+|..+|+|++|+.++++|+++.+... ..+.+...++.+...+++..+.....|.+.
T Consensus 186 ~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~A 263 (293)
T 3u3w_A 186 EALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKA 263 (293)
T ss_dssp HHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHH
Confidence 433 233566899999999999999999999999999986542 334788888888888774323344444443
No 154
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.05 E-value=6.1e-09 Score=84.61 Aligned_cols=136 Identities=14% Similarity=0.098 Sum_probs=106.1
Q ss_pred HHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy8368 152 LKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKAL 231 (372)
Q Consensus 152 ~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL 231 (372)
...+..+...|..++..|+|.+|+..|.+++.+.+.... ......++.++|.+|..+|+|++|+.++++++
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 76 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD---------KAAERIAYSNLGNAYIFLGEFETASEYYKKTL 76 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCC---------chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 356888999999999999999999999999998765321 12235789999999999999999999999999
Q ss_pred HhhccCCCC--chhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc---cHHHHHHHHHHHHHHHHHHH
Q psy8368 232 QFASHFATK--DVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS---VRAEIDKEILKADLGNQQYQ 296 (372)
Q Consensus 232 ~~~~~~~p~--~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~---~~~~~~~~l~~~~~~~~~~~ 296 (372)
++.+..+.. ...+++++|.+|..+|++++|+..+++++.+.+... ....+...++.+....+++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 146 (164)
T 3ro3_A 77 LLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHD 146 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHH
Confidence 855433222 366899999999999999999999999998854321 22345566666665555544
No 155
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.04 E-value=1.9e-09 Score=106.17 Aligned_cols=139 Identities=13% Similarity=0.074 Sum_probs=106.5
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhcc------------CCChHHHHHHHHH------HHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQ------------VTNYEDQMQLEEY------LCRVYRNLMVCY 214 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~------------~~~~~~~~~~~~l------~~~l~~Nla~~~ 214 (372)
..+..+...|..++..|++.+|+..|.+++...+... ...+.....+... ...++.++|.+|
T Consensus 241 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 320 (537)
T 3fp2_A 241 NAALALCYTGIFHFLKNNLLDAQVLLQESINLHPTPNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMY 320 (537)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHH
Confidence 4577788888888888888888888888887654300 0111111111111 146788899999
Q ss_pred HHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHH
Q psy8368 215 NNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQ 294 (372)
Q Consensus 215 ~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~ 294 (372)
..+|+|++|+..++++++ .+|++..+++.+|.+|..+|++++|+..|+++++++|++. .+...++.+....++
T Consensus 321 ~~~~~~~~A~~~~~~a~~----~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~---~~~~~l~~~~~~~g~ 393 (537)
T 3fp2_A 321 FILQDYKNAKEDFQKAQS----LNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLP---EVPTFFAEILTDRGD 393 (537)
T ss_dssp HHTTCHHHHHHHHHHHHH----HCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT---HHHHHHHHHHHHTTC
T ss_pred HhcCCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh---HHHHHHHHHHHHhCC
Confidence 999999999999999997 8888899999999999999999999999999999999998 888888888777766
Q ss_pred HHHH
Q psy8368 295 YQKE 298 (372)
Q Consensus 295 ~~~~ 298 (372)
+.++
T Consensus 394 ~~~A 397 (537)
T 3fp2_A 394 FDTA 397 (537)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 156
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.03 E-value=3.8e-10 Score=85.51 Aligned_cols=65 Identities=15% Similarity=0.244 Sum_probs=39.5
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchh-HHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 208 RNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVK-LFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 208 ~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~k-a~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
.++|.++++.|+|++|+..++++++ .+|++.. +++.+|.+|..+|++++|+.+|+++++++|++.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~----~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 69 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQ----TEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP 69 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH----HCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH----HCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 3455566666666666666666665 5566655 666666666666666666666666666666655
No 157
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.03 E-value=1.8e-09 Score=82.58 Aligned_cols=69 Identities=12% Similarity=0.029 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
..+++++|.+|+++|+|++|+.+++++++ ++|+++.+|+.+|.+|..+|++++|+..|++++++.|.+.
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~ 75 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVE----TDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEG 75 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCC
Confidence 57899999999999999999999999998 9999999999999999999999999999999999988544
No 158
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.03 E-value=2.2e-09 Score=95.86 Aligned_cols=113 Identities=12% Similarity=-0.045 Sum_probs=94.2
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..+..+...|..++..|+|.+|+..|.+++........++. .....++.++|.+|..+|+|++|+.+++++++
T Consensus 83 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-------~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 155 (283)
T 3edt_B 83 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFH-------PDVAKQLNNLALLCQNQGKAEEVEYYYRRALE 155 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCC-------hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34667889999999999999999999999998644322211 12267899999999999999999999999998
Q ss_pred hhccC----CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhc
Q psy8368 233 FASHF----ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLA 272 (372)
Q Consensus 233 ~~~~~----~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~ 272 (372)
+.... +|....+++.+|.+|..+|++++|+..|++++++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~ 199 (283)
T 3edt_B 156 IYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRA 199 (283)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 42211 66788899999999999999999999999999873
No 159
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.02 E-value=2.1e-09 Score=102.06 Aligned_cols=112 Identities=13% Similarity=0.132 Sum_probs=96.9
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..+..+...|..+...|+|++|+..|.+|+.+.+.... ......++.|+|.||..+|+|++|+.+++++++
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 252 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ---------PQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIA 252 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC---------hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 45678889999999999999999999999999765421 123367899999999999999999999999998
Q ss_pred hhccC-C-CCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcC
Q psy8368 233 FASHF-A-TKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAA 273 (372)
Q Consensus 233 ~~~~~-~-p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p 273 (372)
+.... + |....+++++|.+|..+|++++|+.++++|+++.+
T Consensus 253 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 253 VFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 55432 4 77889999999999999999999999999999865
No 160
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.02 E-value=7e-09 Score=94.97 Aligned_cols=140 Identities=11% Similarity=0.025 Sum_probs=105.1
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhc
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFAS 235 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~ 235 (372)
..+...|..+...|+|++|+..|.+|+........... ...+++|+|.+|..+|+|++|+.++++++++..
T Consensus 116 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~---------~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~ 186 (293)
T 2qfc_A 116 QWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQ---------NLYIENAIANIYAENGYLKKGIDLFEQILKQLE 186 (293)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTH---------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHH---------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 33455777778888888888888888876544322111 256899999999999999999999999996443
Q ss_pred cCCCC----chhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy8368 236 HFATK----DVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS---VRAEIDKEILKADLGNQQYQKETKARCMK 305 (372)
Q Consensus 236 ~~~p~----~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 305 (372)
.. |+ .+.+++++|.+|..+|+|++|+.++++|+++.++.. ..+.+...++.+...++++.++....+.+
T Consensus 187 ~~-~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~ 262 (293)
T 2qfc_A 187 AL-HDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKK 262 (293)
T ss_dssp HS-CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred hc-CccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 33 33 236999999999999999999999999999875321 23477888888888877776553444444
No 161
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.02 E-value=2.3e-09 Score=98.21 Aligned_cols=103 Identities=12% Similarity=0.086 Sum_probs=95.5
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
...+...|..++..|+|.+|+..|.+++...+.. ..++.++|.++..+|+|++|+.+++++++
T Consensus 21 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-- 83 (327)
T 3cv0_A 21 HENPMEEGLSMLKLANLAEAALAFEAVCQAAPER---------------EEAWRSLGLTQAENEKDGLAIIALNHARM-- 83 (327)
T ss_dssp SSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHh--
Confidence 4556788999999999999999999999986554 57888999999999999999999999998
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
.+|++..+++.+|.+|..+|++++|+..|+++++++|.+.
T Consensus 84 --~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 123 (327)
T 3cv0_A 84 --LDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYE 123 (327)
T ss_dssp --HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTT
T ss_pred --cCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccH
Confidence 8999999999999999999999999999999999999887
No 162
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.00 E-value=4.4e-09 Score=84.09 Aligned_cols=88 Identities=10% Similarity=0.111 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDK 283 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~ 283 (372)
...+.++|.++++.|+|++|+..+.+++. .+|++..+++++|.+|..+|++++|+.+|+++++++|++. .++.
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~----~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~ 81 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAIT----RNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSV---KAHF 81 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHh----hCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhH---HHHH
Confidence 57889999999999999999999999998 8999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHHH
Q psy8368 284 EILKADLGNQQYQKE 298 (372)
Q Consensus 284 ~l~~~~~~~~~~~~~ 298 (372)
.++.+....+++..+
T Consensus 82 ~l~~~~~~~~~~~~A 96 (137)
T 3q49_B 82 FLGQCQLEMESYDEA 96 (137)
T ss_dssp HHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHhhHHHH
Confidence 999988887766543
No 163
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.99 E-value=4.7e-09 Score=77.54 Aligned_cols=84 Identities=19% Similarity=0.222 Sum_probs=76.2
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+..+...|..++..|+|.+|+..|.+++...+.. ..++.++|.+|.++++|++|+.+++++++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~- 71 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALE- 71 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHHhhHHHHHHHHHHHHh-
Confidence 46678889999999999999999999999986544 56889999999999999999999999998
Q ss_pred hccCCCCchhHHHHHHHHHHhcC
Q psy8368 234 ASHFATKDVKLFFVWGKALIGLQ 256 (372)
Q Consensus 234 ~~~~~p~~~ka~~r~a~a~~~l~ 256 (372)
++|++..+++++|.++..+|
T Consensus 72 ---~~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 72 ---LDPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp ---HCTTCHHHHHHHHHHHHHHC
T ss_pred ---cCCCCHHHHHHHHHHHHhcC
Confidence 89999999999999998764
No 164
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.99 E-value=6.6e-09 Score=103.90 Aligned_cols=119 Identities=20% Similarity=0.254 Sum_probs=95.5
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhc
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFAS 235 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~ 235 (372)
..+...|..+++.|++++|+..|.+++...+..+...+. ...++.+++.+|.+.|++++|+..++++++
T Consensus 476 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~--------~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~--- 544 (597)
T 2xpi_A 476 LLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKP--------WAATWANLGHAYRKLKMYDAAIDALNQGLL--- 544 (597)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGG--------GHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhh--------HHHHHHHHHHHHHHhcCHHHHHHHHHHHHH---
Confidence 345566666666677777777777666664432111110 146899999999999999999999999998
Q ss_pred cCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHH
Q psy8368 236 HFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKAD 289 (372)
Q Consensus 236 ~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~ 289 (372)
.+|++..+|+.+|.+|...|++++|+..|+++++++|++. .+...+..+.
T Consensus 545 -~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~---~~~~~l~~~~ 594 (597)
T 2xpi_A 545 -LSTNDANVHTAIALVYLHKKIPGLAITHLHESLAISPNEI---MASDLLKRAL 594 (597)
T ss_dssp -HSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHTT
T ss_pred -hCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCh---HHHHHHHHHH
Confidence 8899999999999999999999999999999999999999 8888777654
No 165
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.99 E-value=5.1e-09 Score=95.90 Aligned_cols=112 Identities=13% Similarity=0.101 Sum_probs=91.9
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+..+...|..++..|+|++|+..|.+|+.+....+... .....+++|+|.+|.++|+|++|+.++++++++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~--------~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~ 225 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNE--------EFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH--------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccc--------cchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 467888999999999999999999999998865543211 112478999999999999999999999999985
Q ss_pred hccCCCC--chhHHHHHHHHHHhcCCHHHH-HHHHHHHHhhcC
Q psy8368 234 ASHFATK--DVKLFFVWGKALIGLQEWTSA-IKHLKTARKLAA 273 (372)
Q Consensus 234 ~~~~~p~--~~ka~~r~a~a~~~l~~~e~A-~~~~~~al~l~p 273 (372)
....+.. ...+++++|.+|..+|++++| ..+|++|+.+..
T Consensus 226 ~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~ 268 (293)
T 2qfc_A 226 SCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp HHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 4322111 367899999999999999999 888999998754
No 166
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.98 E-value=3.6e-09 Score=79.99 Aligned_cols=61 Identities=7% Similarity=0.015 Sum_probs=54.5
Q ss_pred HH-HHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 204 CR-VYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 204 ~~-l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
.. +++++|.||..+|+|++|+.+++++++ ++|++..++++ +.+.+|+..|+++..++|++.
T Consensus 34 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~----~~p~~~~~~~~--------~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 34 KDEAYYLMGNAYRKLGDWQKALNNYQSAIE----LNPDSPALQAR--------KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HCTTSTHHHHH--------HHHHHHHHHHCCTTHHHHCCS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHh----cCCCcHHHHHH--------HHHHHHHHHHHHHhccCcccc
Confidence 45 899999999999999999999999998 89999998866 677888999999999998875
No 167
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.98 E-value=2.3e-09 Score=89.10 Aligned_cols=105 Identities=12% Similarity=0.103 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccC--------------CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHF--------------ATKDVKLFFVWGKALIGLQEWTSAIKHLKTAR 269 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~--------------~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al 269 (372)
+..+.++|.++++.|+|.+|+..|+++|++.+.. +|.+..+|+++|.||..+|+|++|+.++.+|+
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 5678899999999999999999999999832110 67788999999999999999999999999999
Q ss_pred hhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q psy8368 270 KLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSSSSS 312 (372)
Q Consensus 270 ~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (372)
+++|++. .+...++.+...++++.++ ...|.+.+...+.
T Consensus 91 ~~~p~~~---~a~~~~g~~~~~~g~~~~A-~~~~~~al~l~p~ 129 (162)
T 3rkv_A 91 KREETNE---KALFRRAKARIAAWKLDEA-EEDLKLLLRNHPA 129 (162)
T ss_dssp HHSTTCH---HHHHHHHHHHHHTTCHHHH-HHHHHHHHHHCGG
T ss_pred hcCCcch---HHHHHHHHHHHHHhcHHHH-HHHHHHHHhcCCC
Confidence 9999999 9999999999888877644 3455555544433
No 168
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.96 E-value=4.9e-09 Score=95.25 Aligned_cols=135 Identities=13% Similarity=0.083 Sum_probs=108.3
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+..+...|..++..|++.+|+..|.+++.........+. .....++.++|.+|..+|+|++|+.++++++++
T Consensus 68 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 140 (311)
T 3nf1_A 68 VATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDH-------PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEI 140 (311)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCC-------hHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 4566788999999999999999999999998643211111 123678999999999999999999999999984
Q ss_pred hcc----CCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhh--------cCCCccHHHHHHHHHHHHHHHHHHHHH
Q psy8368 234 ASH----FATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKL--------AAKDSVRAEIDKEILKADLGNQQYQKE 298 (372)
Q Consensus 234 ~~~----~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l--------~p~~~~~~~~~~~l~~~~~~~~~~~~~ 298 (372)
... .+|....+++.+|.+|..+|++++|+..|++++.+ +|... .+...++.+....+++.++
T Consensus 141 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~---~~~~~la~~~~~~g~~~~A 214 (311)
T 3nf1_A 141 REKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVA---KTKNNLASCYLKQGKFKQA 214 (311)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHH---HHHHHHHHHHHHHTCHHHH
T ss_pred HHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHH---HHHHHHHHHHHHcCCHHHH
Confidence 321 14667889999999999999999999999999998 45444 7788888887777666544
No 169
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.95 E-value=5.2e-09 Score=96.69 Aligned_cols=112 Identities=13% Similarity=0.063 Sum_probs=85.3
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+..+.+.|..+.. |+|++|+.+|++|+.+.+.... ......+++|+|.+|.++|+|++|+.++++++++
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~---------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 184 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEER---------LRQAAELIGKASRLLVRQQKFDEAAASLQKEKSM 184 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCC---------hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 35667777888877 8888888888888877654210 1123578899999999999999999999999984
Q ss_pred hccCCCC--chhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 234 ASHFATK--DVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 234 ~~~~~p~--~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
.+..... ...+++.+|.++..+|++++|+.+|++++ ++|++.
T Consensus 185 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 185 YKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 4322211 24478889999999999999999999999 999765
No 170
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.95 E-value=4.8e-09 Score=98.52 Aligned_cols=97 Identities=9% Similarity=-0.057 Sum_probs=88.5
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+.+.|..+++.|+|.+|+..|.+|+.+.+.. ..+++++|.||..+|+|++|+.+++++++
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~g~~~~A~~~~~~al~-- 258 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSNN---------------EKGLSRRGEAHLAVNDFELARADFQKVLQ-- 258 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHH--
Confidence 6788999999999999999999999999997655 67899999999999999999999999998
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHH-HHHHHHHHh
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSA-IKHLKTARK 270 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A-~~~~~~al~ 270 (372)
++|++..+++.++.++..++++++| ...|.+++.
T Consensus 259 --l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~ 293 (336)
T 1p5q_A 259 --LYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFE 293 (336)
T ss_dssp --HCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 446666554
No 171
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.94 E-value=5.7e-09 Score=96.43 Aligned_cols=110 Identities=13% Similarity=0.062 Sum_probs=62.9
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|+.+...|+|.+|+..|.+++.+....... .....++.|+|.+|.++|+|++|+.++++++++.
T Consensus 36 ~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~ 106 (307)
T 2ifu_A 36 ASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSL---------FHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMY 106 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCH---------HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 3444455677777777777777777777775443110 0113456666666666666666666666666533
Q ss_pred ccCCCC--chhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC
Q psy8368 235 SHFATK--DVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAK 274 (372)
Q Consensus 235 ~~~~p~--~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~ 274 (372)
...... ...++.++|.+|.. |++++|+.+|++|+.+.|.
T Consensus 107 ~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~ 147 (307)
T 2ifu_A 107 VENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFEN 147 (307)
T ss_dssp HTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHh
Confidence 222111 23455666666665 6666666666666666553
No 172
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.94 E-value=1.3e-08 Score=96.52 Aligned_cols=113 Identities=14% Similarity=0.137 Sum_probs=97.6
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..+..+...|..++..|+|++|+..|.+|+.+...... ......+++|+|.||..+|+|++|+.+++++++
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~ 250 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN---------DRFIAISLLNIANSYDRSGDDQMAVEHFQKAAK 250 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 46778889999999999999999999999998754321 113467899999999999999999999999997
Q ss_pred hhcc-CCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC
Q psy8368 233 FASH-FATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAK 274 (372)
Q Consensus 233 ~~~~-~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~ 274 (372)
+... .+|....+++.+|.+|..+|++++|+..+++++++.+.
T Consensus 251 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 251 VSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 5432 46778899999999999999999999999999999764
No 173
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.94 E-value=1.4e-08 Score=78.08 Aligned_cols=101 Identities=9% Similarity=-0.021 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDK 283 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~ 283 (372)
...++++|.+++..|+|++|+..+++++. .+|.+..+++.+|.+|..+|++++|+..++++++++|++. .+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~---~~~~ 76 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIK----LDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWG---KGYS 76 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH---HHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHH----HCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccH---HHHH
Confidence 46788999999999999999999999998 8999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q psy8368 284 EILKADLGNQQYQKETKARCMKMFSSSSS 312 (372)
Q Consensus 284 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (372)
.++.+....+++.+ ....+.+.+...+.
T Consensus 77 ~~a~~~~~~~~~~~-A~~~~~~~~~~~~~ 104 (118)
T 1elw_A 77 RKAAALEFLNRFEE-AKRTYEEGLKHEAN 104 (118)
T ss_dssp HHHHHHHHTTCHHH-HHHHHHHHHTTCTT
T ss_pred HHHHHHHHHhhHHH-HHHHHHHHHHcCCC
Confidence 99988887776644 34556665554433
No 174
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.93 E-value=1.5e-08 Score=101.30 Aligned_cols=121 Identities=12% Similarity=0.057 Sum_probs=104.1
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
...+...|..+++.|++++|+..|.+++...+.. ...+++++.+|.+.|++++|+..++++++
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~~~~-- 435 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQF---------------GPAWIGFAHSFAIEGEHDQAISAYTTAAR-- 435 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--
Confidence 4566678888888899999999998888875443 56888999999999999999999999997
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHH
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQK 297 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~ 297 (372)
.+|++..+++.+|.+|...|++++|+..|+++++++|.+. .+...+..+....++..+
T Consensus 436 --~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~---~~~~~l~~~~~~~g~~~~ 493 (597)
T 2xpi_A 436 --LFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDP---LLLNELGVVAFNKSDMQT 493 (597)
T ss_dssp --TTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHTTCHHH
T ss_pred --hCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh---HHHHHHHHHHHHhCCHHH
Confidence 8899999999999999999999999999999999999998 888888777766655543
No 175
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.93 E-value=3.5e-09 Score=80.86 Aligned_cols=95 Identities=16% Similarity=0.131 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC--CccHHHHH
Q psy8368 205 RVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAK--DSVRAEID 282 (372)
Q Consensus 205 ~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~--~~~~~~~~ 282 (372)
.++.++|.++...|+|++|+.+++++++ .+|.+..+++.+|.+|..+|++++|+..|+++++++|+ +. .+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~----~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~---~~~ 79 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQ----LDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNK---DVW 79 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHH----HCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCH---HHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHH----hCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchH---HHH
Confidence 5678999999999999999999999998 89999999999999999999999999999999999999 88 888
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHhhc
Q psy8368 283 KEILKADLGN-QQYQKETKARCMKMF 307 (372)
Q Consensus 283 ~~l~~~~~~~-~~~~~~~~~~~~~~~ 307 (372)
..++.+.... +++.+ ....+.+..
T Consensus 80 ~~l~~~~~~~~~~~~~-A~~~~~~~~ 104 (112)
T 2kck_A 80 AAKADALRYIEGKEVE-AEIAEARAK 104 (112)
T ss_dssp HHHHHHHTTCSSCSHH-HHHHHHHHG
T ss_pred HHHHHHHHHHhCCHHH-HHHHHHHHh
Confidence 8888887766 65543 333444443
No 176
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.92 E-value=6.9e-09 Score=94.22 Aligned_cols=113 Identities=12% Similarity=-0.004 Sum_probs=93.3
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..+..+...|..++..|+|.+|+..|.+++.+.......+. .....++.++|.+|..+|+|++|+.+++++++
T Consensus 109 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~-------~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 181 (311)
T 3nf1_A 109 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDH-------PDVAKQLNNLALLCQNQGKYEEVEYYYQRALE 181 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTC-------HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCC-------hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34567888999999999999999999999998633211111 12267899999999999999999999999998
Q ss_pred hhccC----CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhc
Q psy8368 233 FASHF----ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLA 272 (372)
Q Consensus 233 ~~~~~----~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~ 272 (372)
..... +|....+++.+|.+|..+|++++|+..|++++++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 225 (311)
T 3nf1_A 182 IYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRA 225 (311)
T ss_dssp HHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 43322 67788899999999999999999999999999864
No 177
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.92 E-value=1.8e-08 Score=81.79 Aligned_cols=113 Identities=13% Similarity=0.125 Sum_probs=93.8
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+..+...|..++..|+|.+|+..|.+++.+.+.... ......++.++|.++..+|+|++|+.+++++++.
T Consensus 48 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 118 (164)
T 3ro3_A 48 ERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD---------RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 118 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC---------cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3457888999999999999999999999998765421 1123678999999999999999999999999985
Q ss_pred hccCC--CCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCC
Q psy8368 234 ASHFA--TKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKD 275 (372)
Q Consensus 234 ~~~~~--p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~ 275 (372)
..... +....+++.+|.+|..+|++++|+..+++++++....
T Consensus 119 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 162 (164)
T 3ro3_A 119 AQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREV 162 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Confidence 54332 2246789999999999999999999999999986643
No 178
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.92 E-value=9.3e-09 Score=100.40 Aligned_cols=115 Identities=11% Similarity=0.023 Sum_probs=87.3
Q ss_pred HHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHH---ccCHHHHHHHHHHHHHhh
Q psy8368 158 LGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNN---NKQYKLTCDCASKALQFA 234 (372)
Q Consensus 158 ~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~k---l~~y~~Ai~~~~~aL~~~ 234 (372)
+...|..++..|++.+|+..|.+++...+..+.... ...++.++|.+|.. +|++++|+..++++++
T Consensus 375 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~---------~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~-- 443 (514)
T 2gw1_A 375 PNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYV---------GIAPLVGKATLLTRNPTVENFIEATNLLEKASK-- 443 (514)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSS---------CSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHH---------HHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHH--
Confidence 344455555555555555555555554433211000 01288999999999 9999999999999998
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKA 288 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~ 288 (372)
.+|++..+++.+|.+|..+|++++|+..|+++++++|++. .+...+.-+
T Consensus 444 --~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~---~~~~~~~~~ 492 (514)
T 2gw1_A 444 --LDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTME---EKLQAITFA 492 (514)
T ss_dssp --HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHH---HHHHHHHHH
T ss_pred --hCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccH---HHHHHHHHH
Confidence 8999999999999999999999999999999999999998 777666443
No 179
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.91 E-value=1.8e-08 Score=85.85 Aligned_cols=135 Identities=6% Similarity=-0.035 Sum_probs=105.5
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+..+...|..++..|+|.+|+..|.+++.+...... ......++.|+|.+|..+|+|++|+.++.+++++
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGD---------HTAEHRALHQVGMVERMAGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCC---------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4678889999999999999999999999998754321 1123678999999999999999999999999986
Q ss_pred hccCC--C-CchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC--Cc-cHHHHHHHHHHHHHHHHHHHH
Q psy8368 234 ASHFA--T-KDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAK--DS-VRAEIDKEILKADLGNQQYQK 297 (372)
Q Consensus 234 ~~~~~--p-~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~--~~-~~~~~~~~l~~~~~~~~~~~~ 297 (372)
..... + ....+++++|.+|..+|++++|+..+++++.+.+. +. ..+.+...++.+....+++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 165 (203)
T 3gw4_A 96 LASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLE 165 (203)
T ss_dssp HHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHH
Confidence 54333 2 34678999999999999999999999999987543 22 122344666666666665543
No 180
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.91 E-value=1.2e-08 Score=83.78 Aligned_cols=83 Identities=11% Similarity=0.071 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHcc---CHHHHHHHHHHHHHhhccCC-C-CchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccH
Q psy8368 204 CRVYRNLMVCYNNNK---QYKLTCDCASKALQFASHFA-T-KDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVR 278 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~---~y~~Ai~~~~~aL~~~~~~~-p-~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~ 278 (372)
..+.+|+|.|+.+.+ ++.+++..++.+++ .+ | ++..++|.+|.+|+++++|++|+.+++++|+++|+|.
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~----~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~-- 105 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLP----KGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNN-- 105 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHH----HSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCH--
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh----cCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH--
Confidence 578899999999988 77899999999998 66 6 5799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy8368 279 AEIDKEILKADLGNQ 293 (372)
Q Consensus 279 ~~~~~~l~~~~~~~~ 293 (372)
.+......+..++.
T Consensus 106 -QA~~Lk~~ie~~~~ 119 (152)
T 1pc2_A 106 -QAKELERLIDKAMK 119 (152)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHH
Confidence 88877777766543
No 181
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.90 E-value=1.6e-08 Score=79.80 Aligned_cols=96 Identities=17% Similarity=0.086 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDK 283 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~ 283 (372)
...++++|.+++..++|++|+..++++++ .+|.+..+++.+|.+|..+|++++|+..|+++++++|++. .+..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~----~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~---~~~~ 88 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIK----RNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFI---KGYT 88 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHT----TCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCH---HHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----cCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCch---HHHH
Confidence 57889999999999999999999999997 8999999999999999999999999999999999999999 8999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q psy8368 284 EILKADLGNQQYQKETKARCMKMF 307 (372)
Q Consensus 284 ~l~~~~~~~~~~~~~~~~~~~~~~ 307 (372)
.++.+....+++.++ ...+.+.+
T Consensus 89 ~la~~~~~~~~~~~A-~~~~~~~~ 111 (133)
T 2lni_A 89 RKAAALEAMKDYTKA-MDVYQKAL 111 (133)
T ss_dssp HHHHHHHHTTCHHHH-HHHHHHHH
T ss_pred HHHHHHHHHhhHHHH-HHHHHHHH
Confidence 999888777666443 33444443
No 182
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.90 E-value=1.4e-08 Score=83.58 Aligned_cols=99 Identities=10% Similarity=0.056 Sum_probs=86.9
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
...+...|..++..|+|.+|+..|.+++...+.. ..++.++|.+|..+|+|++|+.++.++++
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~-- 109 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKY---------------IKGYYRRAASNMALGKFRAALRDYETVVK-- 109 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHH--
Confidence 4567889999999999999999999999987654 57899999999999999999999999998
Q ss_pred ccCCCCchhHHHHH--HHHHHhcCCHHHHHHHHHHHHhhc
Q psy8368 235 SHFATKDVKLFFVW--GKALIGLQEWTSAIKHLKTARKLA 272 (372)
Q Consensus 235 ~~~~p~~~ka~~r~--a~a~~~l~~~e~A~~~~~~al~l~ 272 (372)
++|.+..++..+ +..+..+|++++|+..+.++..+.
T Consensus 110 --~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 147 (166)
T 1a17_A 110 --VKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVV 147 (166)
T ss_dssp --HSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --hCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHh
Confidence 889998888554 444888999999999999887654
No 183
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.90 E-value=1.1e-08 Score=97.32 Aligned_cols=128 Identities=14% Similarity=0.111 Sum_probs=106.0
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..+..+...|..++..|+|.+|+..|.+++...+..+ .....++.++|.+|..+|+|++|+.+++++++
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 114 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDL-----------RTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLT 114 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH-----------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccCh-----------hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 5577888999999999999999999999999843321 12356899999999999999999999999998
Q ss_pred hhccC--CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhh------cCCCccHHHHHHHHHHHHHHHHH
Q psy8368 233 FASHF--ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKL------AAKDSVRAEIDKEILKADLGNQQ 294 (372)
Q Consensus 233 ~~~~~--~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l------~p~~~~~~~~~~~l~~~~~~~~~ 294 (372)
+.... +|....+++.+|.+|..+|++++|+..|.+++.+ .|... .+...++.+....++
T Consensus 115 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~---~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 115 LAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEG---RALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH---HHHHHHHHHHHHHHH
T ss_pred HHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHH---HHHHHHHHHHHHcCc
Confidence 44322 4567889999999999999999999999999998 34444 677777777777666
No 184
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.89 E-value=4.2e-09 Score=90.51 Aligned_cols=101 Identities=11% Similarity=0.013 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCch----------------hHHHHHHHHHHhcCCHHHHHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDV----------------KLFFVWGKALIGLQEWTSAIKHLKT 267 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~----------------ka~~r~a~a~~~l~~~e~A~~~~~~ 267 (372)
...+.++|.++++.|+|.+|+..++++++ +.|.+. .+++++|.+|..+|+|++|+.+|.+
T Consensus 38 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~----~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 113 (198)
T 2fbn_A 38 AFDIKEEGNEFFKKNEINEAIVKYKEALD----FFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASK 113 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----TTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----HHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 56788999999999999999999999998 777776 8999999999999999999999999
Q ss_pred HHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q psy8368 268 ARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSSSSS 312 (372)
Q Consensus 268 al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (372)
+++++|++. .+...++.+....+++.+ ....|.+.+...+.
T Consensus 114 al~~~p~~~---~~~~~lg~~~~~~~~~~~-A~~~~~~al~~~p~ 154 (198)
T 2fbn_A 114 VLKIDKNNV---KALYKLGVANMYFGFLEE-AKENLYKAASLNPN 154 (198)
T ss_dssp HHHHSTTCH---HHHHHHHHHHHHHTCHHH-HHHHHHHHHHHSTT
T ss_pred HHHhCcccH---HHHHHHHHHHHHcccHHH-HHHHHHHHHHHCCC
Confidence 999999999 999999999888877754 44556666554443
No 185
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.88 E-value=4.5e-08 Score=95.02 Aligned_cols=122 Identities=11% Similarity=0.118 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHH
Q psy8368 148 FAKVLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCA 227 (372)
Q Consensus 148 ~~~~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~ 227 (372)
..+++..+....+.+......|+|++|+..|.++|.+....-.++. ...+..++|+|.+|..+|+|++|+.++
T Consensus 291 v~~~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~H-------p~~a~~~~nLa~~y~~~g~~~eA~~~~ 363 (433)
T 3qww_A 291 IRDMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSN-------VYMLHMMYQAMGVCLYMQDWEGALKYG 363 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTS-------HHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhc-------hHHHHHHHHHHHHHHhhcCHHHHHHHH
Confidence 3455556666677777777889999999999999998755433322 123688999999999999999999999
Q ss_pred HHHHHhhcc-CC---CCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhh-----cCCCc
Q psy8368 228 SKALQFASH-FA---TKDVKLFFVWGKALIGLQEWTSAIKHLKTARKL-----AAKDS 276 (372)
Q Consensus 228 ~~aL~~~~~-~~---p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l-----~p~~~ 276 (372)
+++|.+.+. +. |+-...++++|.+|..+|+|++|+..|++|+++ -|+++
T Consensus 364 ~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp 421 (433)
T 3qww_A 364 QKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHP 421 (433)
T ss_dssp HHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCH
T ss_pred HHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 999986542 33 445668999999999999999999999999986 47787
No 186
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.87 E-value=1.7e-08 Score=79.71 Aligned_cols=102 Identities=9% Similarity=0.053 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCch---hHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHH
Q psy8368 206 VYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDV---KLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEID 282 (372)
Q Consensus 206 l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~---ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~ 282 (372)
.++++|.+++..|+|++|+..++++++ .+|++. .+++.+|.+|..+|++++|+..|.++++++|++.....+.
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~----~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~ 79 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLE----LYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGL 79 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHH----HCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHH----HCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHH
Confidence 467899999999999999999999998 788888 7999999999999999999999999999999993222888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q psy8368 283 KEILKADLGNQQYQKETKARCMKMFSSSSS 312 (372)
Q Consensus 283 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (372)
..++.+....+++.+ ....+.+++...+.
T Consensus 80 ~~la~~~~~~g~~~~-A~~~~~~~~~~~p~ 108 (129)
T 2xev_A 80 LKLGLSQYGEGKNTE-AQQTLQQVATQYPG 108 (129)
T ss_dssp HHHHHHHHHTTCHHH-HHHHHHHHHHHSTT
T ss_pred HHHHHHHHHcCCHHH-HHHHHHHHHHHCCC
Confidence 888888887776644 44556665554443
No 187
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.86 E-value=2.5e-08 Score=80.30 Aligned_cols=101 Identities=11% Similarity=-0.026 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCc---hhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKD---VKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAE 280 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~---~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~ 280 (372)
...++++|.+++..|+|.+|+..++++++ .+|++ ..+++++|.+|..+|++++|+.+|+++++++|++. .
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~----~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~---~ 100 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALG----LDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDV---K 100 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCH---H
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH----HcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCH---H
Confidence 56788999999999999999999999997 88987 89999999999999999999999999999999999 9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q psy8368 281 IDKEILKADLGNQQYQKETKARCMKMFSSSSS 312 (372)
Q Consensus 281 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (372)
+...++.+....+++.+ ....+.+.+.....
T Consensus 101 ~~~~~a~~~~~~~~~~~-A~~~~~~al~~~p~ 131 (148)
T 2dba_A 101 ALYRRSQALEKLGRLDQ-AVLDLQRCVSLEPK 131 (148)
T ss_dssp HHHHHHHHHHHHTCHHH-HHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHcCCHHH-HHHHHHHHHHcCCC
Confidence 99999998888776654 34555555544333
No 188
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.86 E-value=5.6e-08 Score=94.39 Aligned_cols=133 Identities=12% Similarity=-0.004 Sum_probs=102.2
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..+.........+..+|+|++|+..|.+++......-.++. ......++|+|.+|..+|+|++|+.++.++|.
T Consensus 285 ~~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h-------~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~ 357 (429)
T 3qwp_A 285 KEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDIN-------IYQLKVLDCAMDACINLGLLEEALFYGTRTME 357 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTS-------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccc-------hHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 34555566667788899999999999999987654322222 12378899999999999999999999999997
Q ss_pred hhcc-C---CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhh-----cCCCccHHHHHHHHHHHHHHH
Q psy8368 233 FASH-F---ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKL-----AAKDSVRAEIDKEILKADLGN 292 (372)
Q Consensus 233 ~~~~-~---~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l-----~p~~~~~~~~~~~l~~~~~~~ 292 (372)
+... + .|.-...++++|.+|..+|+|++|+..|++|+++ -|+++..+++...|..++..+
T Consensus 358 i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 358 PYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred hHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 6542 3 3445668999999999999999999999999976 478884445555555555443
No 189
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.85 E-value=3.3e-08 Score=90.14 Aligned_cols=129 Identities=16% Similarity=0.126 Sum_probs=103.2
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|..++..|+|.+|+..|.+++...+.. ......++.++|.+|..+|+|++|+.++++++.+.
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 73 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTED-----------LKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLA 73 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCccc-----------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 4567788999999999999999999999984332 11235789999999999999999999999999754
Q ss_pred ccC--CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc---cHHHHHHHHHHHHHHHHH
Q psy8368 235 SHF--ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS---VRAEIDKEILKADLGNQQ 294 (372)
Q Consensus 235 ~~~--~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~---~~~~~~~~l~~~~~~~~~ 294 (372)
... .|....+++.+|.+|..+|++++|+..+.+++++.|... ....+...++.+....++
T Consensus 74 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 74 RTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 322 344678999999999999999999999999999977543 122366666666666665
No 190
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.85 E-value=6.6e-08 Score=86.95 Aligned_cols=108 Identities=17% Similarity=0.069 Sum_probs=68.5
Q ss_pred HHHHHhhHHHHh----ccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHH----ccCHHHHHHHH
Q psy8368 156 QELGASGKNAFN----DKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNN----NKQYKLTCDCA 227 (372)
Q Consensus 156 ~~~k~~Gn~~~~----~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~k----l~~y~~Ai~~~ 227 (372)
..+...|..++. .+++.+|+..|++++..- . ...++++|.+|.. .+++++|+.++
T Consensus 39 ~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~---------------~~a~~~lg~~~~~g~~~~~~~~~A~~~~ 101 (273)
T 1ouv_A 39 SGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--Y---------------SNGCHLLGNLYYSGQGVSQNTNKALQYY 101 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--C---------------HHHHHHHHHHHHHTSSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--C---------------HHHHHHHHHHHhCCCCcccCHHHHHHHH
Confidence 344455555555 555555555555555441 0 4566677777777 77777777777
Q ss_pred HHHHHhhccCCCCchhHHHHHHHHHHh----cCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHH
Q psy8368 228 SKALQFASHFATKDVKLFFVWGKALIG----LQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLG 291 (372)
Q Consensus 228 ~~aL~~~~~~~p~~~ka~~r~a~a~~~----l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~ 291 (372)
+++++ . +++.+++++|.+|.. .+++++|+.+|++++++. +. .+...++.+...
T Consensus 102 ~~a~~----~--~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~---~a~~~lg~~~~~ 158 (273)
T 1ouv_A 102 SKACD----L--KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DG---DGCTILGSLYDA 158 (273)
T ss_dssp HHHHH----T--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CH---HHHHHHHHHHHH
T ss_pred HHHHH----c--CCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cH---HHHHHHHHHHHc
Confidence 77775 3 366777777777777 777777777777777665 34 556666666555
No 191
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.84 E-value=4.5e-08 Score=90.26 Aligned_cols=132 Identities=11% Similarity=-0.061 Sum_probs=101.6
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhc
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFAS 235 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~ 235 (372)
..+...|..+...|++++|...|++++...+... ..++.+++.++.++|++++|+..++++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~--------------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~--- 162 (308)
T 2ond_A 100 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDP--------------TLVYIQYMKFARRAEGIKSGRMIFKKARE--- 162 (308)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCT--------------HHHHHHHHHHHHHHHCHHHHHHHHHHHHT---
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCc--------------cHHHHHHHHHHHHhcCHHHHHHHHHHHHh---
Confidence 4566788888888999999999999998654321 12788889999999999999999999997
Q ss_pred cCCCCchhHHHHHHHHHH-hcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q psy8368 236 HFATKDVKLFFVWGKALI-GLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSS 309 (372)
Q Consensus 236 ~~~p~~~ka~~r~a~a~~-~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (372)
.+|.+..+|+..+.... .+|++++|+..|+++++++|++. .++..+..+....++.. ..+..|.+.+..
T Consensus 163 -~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~~g~~~-~A~~~~~~al~~ 232 (308)
T 2ond_A 163 -DARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIP---EYVLAYIDYLSHLNEDN-NTRVLFERVLTS 232 (308)
T ss_dssp -STTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCH---HHHHHHHHHHHTTCCHH-HHHHHHHHHHHS
T ss_pred -cCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH---HHHHHHHHHHHHCCCHH-HHHHHHHHHHhc
Confidence 77888877776665543 37999999999999999999988 88888777776655443 455666666654
No 192
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.84 E-value=2.2e-08 Score=94.46 Aligned_cols=136 Identities=15% Similarity=0.125 Sum_probs=106.4
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+..+...|..++..|+|.+|+..|.+++.+.+.... ......++.++|.+|..+|+|++|+.++++++++
T Consensus 186 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 256 (406)
T 3sf4_A 186 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD---------KAAERRAYSNLGNAYIFLGEFETASEYYKKTLLL 256 (406)
T ss_dssp HHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCC---------cHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 3557888999999999999999999999999766421 1123568999999999999999999999999984
Q ss_pred hccCCCC--chhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc---cHHHHHHHHHHHHHHHHHHHHH
Q psy8368 234 ASHFATK--DVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS---VRAEIDKEILKADLGNQQYQKE 298 (372)
Q Consensus 234 ~~~~~p~--~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~---~~~~~~~~l~~~~~~~~~~~~~ 298 (372)
.+..... ...+++.+|.+|..+|++++|+..|++++++.+... ....+...++.+....+++.++
T Consensus 257 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 326 (406)
T 3sf4_A 257 ARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQA 326 (406)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHH
Confidence 4332211 267899999999999999999999999999976542 1125667777777766655443
No 193
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.82 E-value=3.1e-08 Score=93.47 Aligned_cols=129 Identities=16% Similarity=0.129 Sum_probs=104.8
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|..++..|+|.+|+..|++++...+..+ .....++.++|.+|..+|+|++|+.++++++.+.
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 77 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDL-----------KTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLA 77 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccH-----------HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 56778899999999999999999999999843321 1235789999999999999999999999999854
Q ss_pred ccC--CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc---cHHHHHHHHHHHHHHHHH
Q psy8368 235 SHF--ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS---VRAEIDKEILKADLGNQQ 294 (372)
Q Consensus 235 ~~~--~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~---~~~~~~~~l~~~~~~~~~ 294 (372)
... .|....+++.+|.+|..+|++++|+..+.+++.+.|... ....+...++.+....++
T Consensus 78 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 78 RTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 433 344688999999999999999999999999999987542 122466777777666666
No 194
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.81 E-value=4.3e-08 Score=95.08 Aligned_cols=103 Identities=10% Similarity=0.046 Sum_probs=85.0
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHc-----------------
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNN----------------- 217 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl----------------- 217 (372)
...+...|..+...|++.+|+..|.+|+...|.. ..++.++|.||...
T Consensus 247 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~ 311 (472)
T 4g1t_A 247 TDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNN---------------AYLHCQIGCCYRAKVFQVMNLRENGMYGKRK 311 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHHHHHHHHC------CHHH
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCh---------------HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 4567789999999999999999999999987665 46677777777543
Q ss_pred --cCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 218 --KQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 218 --~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
+.+++|+.++.++++ ++|.+..+++.+|.+|..+|++++|+.+|+++++++|++.
T Consensus 312 ~~~~~~~A~~~~~~a~~----~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~ 368 (472)
T 4g1t_A 312 LLELIGHAVAHLKKADE----ANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPV 368 (472)
T ss_dssp HHHHHHHHHHHHHHHHH----HCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHH
T ss_pred HHhhHHHHHHHHHHHhh----cCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCCh
Confidence 346788888888887 7888888888888888888888888888888888888765
No 195
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.80 E-value=6.8e-08 Score=75.48 Aligned_cols=97 Identities=11% Similarity=0.029 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDK 283 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~ 283 (372)
...+.++|.++...++|++|+..+++++. .+|++..+++.+|.+|..+|++++|+..+.+++.++|++. .+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~---~~~~ 84 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIE----LNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYS---KAYG 84 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHH
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHH----cCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCH---HHHH
Confidence 67889999999999999999999999998 8899999999999999999999999999999999999999 8888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc
Q psy8368 284 EILKADLGNQQYQKETKARCMKMFS 308 (372)
Q Consensus 284 ~l~~~~~~~~~~~~~~~~~~~~~~~ 308 (372)
.++.+....+++... ...+.+.+.
T Consensus 85 ~~~~~~~~~~~~~~A-~~~~~~~~~ 108 (131)
T 2vyi_A 85 RMGLALSSLNKHVEA-VAYYKKALE 108 (131)
T ss_dssp HHHHHHHHTTCHHHH-HHHHHHHHH
T ss_pred HHHHHHHHhCCHHHH-HHHHHHHHh
Confidence 888888777666433 334444443
No 196
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.79 E-value=5.4e-09 Score=98.29 Aligned_cols=102 Identities=10% Similarity=-0.127 Sum_probs=57.6
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhc
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFAS 235 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~ 235 (372)
..+.+.|..+++.|+|.+|+..|.+++.+.+.. ..+++|+|.||..+|+|++|+.+++++++
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~a~~~~g~~~~A~~~l~~al~--- 292 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKN---------------PKALFRRGKAKAELGQMDSARDDFRKAQK--- 292 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHTTTCHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH---
Confidence 378899999999999999999999999987654 68899999999999999999999999997
Q ss_pred cCCCCchhHHHHHHHHH-HhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 236 HFATKDVKLFFVWGKAL-IGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 236 ~~~p~~~ka~~r~a~a~-~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
++|++..++..++.+. ...+..+.+...|.+++.+.|++.
T Consensus 293 -l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~ 333 (338)
T 2if4_A 293 -YAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGG 333 (338)
T ss_dssp ------------------------------------------
T ss_pred -HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC
Confidence 9999999999999984 556778899999999999999887
No 197
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.79 E-value=1e-07 Score=87.89 Aligned_cols=112 Identities=13% Similarity=0.080 Sum_probs=93.7
Q ss_pred HHHHHHhhHHHH-------hccCH-------HHHHHHHHHHHH-hhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccC
Q psy8368 155 AQELGASGKNAF-------NDKNI-------VSAVRRYRDAVK-LLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQ 219 (372)
Q Consensus 155 ~~~~k~~Gn~~~-------~~g~~-------~~A~~~y~~al~-~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~ 219 (372)
+..+...|..+. ..|++ ++|...|.+|+. +.+.. ..++.++|.++.++|+
T Consensus 50 ~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~---------------~~~~~~~~~~~~~~~~ 114 (308)
T 2ond_A 50 PDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKN---------------MLLYFAYADYEESRMK 114 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTC---------------HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHhcCC
Confidence 345556666655 35775 999999999999 45544 5789999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCchh-HHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Q psy8368 220 YKLTCDCASKALQFASHFATKDVK-LFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKA 288 (372)
Q Consensus 220 y~~Ai~~~~~aL~~~~~~~p~~~k-a~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~ 288 (372)
+++|+..++++++ ++|.+.. +|+.+|.++..+|++++|+..|++|++++|.+. .+......+
T Consensus 115 ~~~A~~~~~~al~----~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~---~~~~~~a~~ 177 (308)
T 2ond_A 115 YEKVHSIYNRLLA----IEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRH---HVYVTAALM 177 (308)
T ss_dssp HHHHHHHHHHHHT----SSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCT---HHHHHHHHH
T ss_pred HHHHHHHHHHHHh----ccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH---HHHHHHHHH
Confidence 9999999999997 8999887 999999999999999999999999999999887 665444333
No 198
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.79 E-value=7.2e-08 Score=74.67 Aligned_cols=98 Identities=17% Similarity=0.247 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDK 283 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~ 283 (372)
..++.++|.++...++|++|+..+.++++ .+|.+..+++.+|.++...|++++|+..|++++.++|.+. .+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~---~~~~ 81 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALE----LDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA---EAWY 81 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----HCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccH---HHHH
Confidence 46788999999999999999999999998 7899999999999999999999999999999999999999 8888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccC
Q psy8368 284 EILKADLGNQQYQKETKARCMKMFSS 309 (372)
Q Consensus 284 ~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (372)
.+..+....+++.+ ....+.+++..
T Consensus 82 ~la~~~~~~~~~~~-A~~~~~~~~~~ 106 (125)
T 1na0_A 82 NLGNAYYKQGDYDE-AIEYYQKALEL 106 (125)
T ss_dssp HHHHHHHHTTCHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHH-HHHHHHHHHHh
Confidence 88888777665543 34445555443
No 199
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.78 E-value=1e-07 Score=81.05 Aligned_cols=114 Identities=15% Similarity=0.015 Sum_probs=93.3
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..+..+...|..+...|+|.+|+..|.+++.+....+... .....+++|+|.++..+|+|++|+.++++++.
T Consensus 64 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~--------~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 135 (203)
T 3gw4_A 64 AEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDP--------LAASANAYEVATVALHFGDLAGARQEYEKSLV 135 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH--------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccH--------HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3567788999999999999999999999999976442111 12267899999999999999999999999997
Q ss_pred hhccCCCC--chhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC
Q psy8368 233 FASHFATK--DVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAK 274 (372)
Q Consensus 233 ~~~~~~p~--~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~ 274 (372)
+....+.. ...++..+|.+|..+|++++|+..+++++.+...
T Consensus 136 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 136 YAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 55433332 2446789999999999999999999999998653
No 200
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.77 E-value=3.9e-07 Score=81.83 Aligned_cols=110 Identities=16% Similarity=0.117 Sum_probs=92.3
Q ss_pred HHHHHHHhhHHHHh----ccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHH----ccCHHHHHH
Q psy8368 154 RAQELGASGKNAFN----DKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNN----NKQYKLTCD 225 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~----~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~k----l~~y~~Ai~ 225 (372)
.+..+...|..++. .+++.+|+..|++|+..- . ..+++++|.+|.. .+++++|+.
T Consensus 73 ~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~---------------~~a~~~lg~~~~~~~~~~~~~~~A~~ 135 (273)
T 1ouv_A 73 YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--Y---------------AEGCASLGGIYHDGKVVTRDFKKAVE 135 (273)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--C---------------HHHHHHHHHHHHHCSSSCCCHHHHHH
T ss_pred CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--C---------------ccHHHHHHHHHHcCCCcccCHHHHHH
Confidence 35677889999999 999999999999999762 1 5688899999999 999999999
Q ss_pred HHHHHHHhhccCCCCchhHHHHHHHHHHh----cCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHH
Q psy8368 226 CASKALQFASHFATKDVKLFFVWGKALIG----LQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLG 291 (372)
Q Consensus 226 ~~~~aL~~~~~~~p~~~ka~~r~a~a~~~----l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~ 291 (372)
+++++++ .+ +..+++++|.+|.. .+++++|+.+|+++++.. +. .+...++.+...
T Consensus 136 ~~~~a~~----~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~---~a~~~lg~~~~~ 194 (273)
T 1ouv_A 136 YFTKACD----LN--DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK--DS---PGCFNAGNMYHH 194 (273)
T ss_dssp HHHHHHH----TT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CH---HHHHHHHHHHHH
T ss_pred HHHHHHh----cC--cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC--CH---HHHHHHHHHHHc
Confidence 9999997 43 67889999999998 999999999999998874 45 666777777665
No 201
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.76 E-value=5.4e-09 Score=103.04 Aligned_cols=103 Identities=10% Similarity=0.050 Sum_probs=89.9
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|..+++.|+|++|+..|++|+++.+.. ..+++|+|.+|..+|+|++|+.+++++++
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~---------------~~~~~~lg~~~~~~g~~~eA~~~~~~al~-- 102 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKY---------------IKGYYRRAASNMALGKFRAALRDYETVVK-- 102 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--
Confidence 5678899999999999999999999999986554 57899999999999999999999999998
Q ss_pred ccCCCCchhHHHHHHHH--HHhcCCHHHHHHHHH-----------HHHhhcCCCc
Q psy8368 235 SHFATKDVKLFFVWGKA--LIGLQEWTSAIKHLK-----------TARKLAAKDS 276 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a--~~~l~~~e~A~~~~~-----------~al~l~p~~~ 276 (372)
++|++..+++.++.+ +..+|++++|+..+. +++.++|+..
T Consensus 103 --~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~ 155 (477)
T 1wao_1 103 --VKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYS 155 (477)
T ss_dssp --HSTTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCC
T ss_pred --hCCCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhcccccccc
Confidence 899999999999999 899999999999999 8888888753
No 202
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.75 E-value=3.9e-08 Score=89.60 Aligned_cols=143 Identities=15% Similarity=0.105 Sum_probs=108.2
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+..+...|..++..|++.+|+..|.+++.+.+.... ......++.++|.+|..+|++++|+.++++++++
T Consensus 182 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 252 (338)
T 3ro2_A 182 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD---------KAAERRAYSNLGNAYIFLGEFETASEYYKKTLLL 252 (338)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC---------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC---------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3557788999999999999999999999998765321 1223568999999999999999999999999984
Q ss_pred hccCCCC--chhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8368 234 ASHFATK--DVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS---VRAEIDKEILKADLGNQQYQKETKARCMKM 306 (372)
Q Consensus 234 ~~~~~p~--~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (372)
.+..... ...+++.+|.+|..+|++++|+..+++++.+.+... ....+...++.+....++..++ ...+.+.
T Consensus 253 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~a 329 (338)
T 3ro2_A 253 ARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQA-MHFAEKH 329 (338)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHH-HHHHHHH
T ss_pred HHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHH-HHHHHHH
Confidence 4332211 267899999999999999999999999999876432 1224666677776666655433 3344443
No 203
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.75 E-value=4.9e-08 Score=89.08 Aligned_cols=89 Identities=10% Similarity=0.108 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDK 283 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~ 283 (372)
...+.++|.++++.|+|++|+..++++++ .+|++..+++++|.+|..+|++++|+.+|++|++++|++. .+..
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~ 76 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAIT----RNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSV---KAHF 76 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCH---HHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCH---HHHH
Confidence 46788999999999999999999999998 8999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy8368 284 EILKADLGNQQYQKET 299 (372)
Q Consensus 284 ~l~~~~~~~~~~~~~~ 299 (372)
.++.+....+++.++.
T Consensus 77 ~lg~~~~~~g~~~~A~ 92 (281)
T 2c2l_A 77 FLGQCQLEMESYDEAI 92 (281)
T ss_dssp HHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHcCCHHHHH
Confidence 9999888877775544
No 204
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.74 E-value=8.6e-08 Score=87.31 Aligned_cols=110 Identities=7% Similarity=-0.118 Sum_probs=84.7
Q ss_pred HHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhcc
Q psy8368 157 ELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASH 236 (372)
Q Consensus 157 ~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~ 236 (372)
.....|..+++.++|.+|+..|+.++.... +. +...+++++|.++..+|++.+|+.++++++.. .
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d------~~-------~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g--~ 201 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPD------KF-------LAGAAGVAHGVAAANLALFTEAERRLTEANDS--P 201 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSC------HH-------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS--T
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCC------cc-------cHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcC--C
Confidence 667788888888999998888876654310 00 11357889999999999999999999999840 0
Q ss_pred CCCC-chhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHH
Q psy8368 237 FATK-DVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEI 285 (372)
Q Consensus 237 ~~p~-~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l 285 (372)
.+|. ...+++++|.|+..+|+.++|...|++++..+|+ . .+...|
T Consensus 202 ~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~---~~~~aL 247 (282)
T 4f3v_A 202 AGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-P---KVAAAL 247 (282)
T ss_dssp TTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-H---HHHHHH
T ss_pred CCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-H---HHHHHH
Confidence 1155 7779999999999999999999999999999998 7 554444
No 205
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.74 E-value=5.3e-08 Score=76.24 Aligned_cols=98 Identities=8% Similarity=0.063 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCC-------c
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKD-------S 276 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~-------~ 276 (372)
...+.++|.++...|+|++|+.++.++++ .+|.++.+++.+|.+|..+|++++|+.+|.+++.+.|++ .
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~----~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 79 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKE----LDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIA 79 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHh----cCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHH
Confidence 46788999999999999999999999998 889999999999999999999999999999999999877 5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q psy8368 277 VRAEIDKEILKADLGNQQYQKETKARCMKMFSS 309 (372)
Q Consensus 277 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (372)
.+...++.+....+++.. ....+.+.+..
T Consensus 80 ---~~~~~la~~~~~~~~~~~-A~~~~~~~~~~ 108 (131)
T 1elr_A 80 ---KAYARIGNSYFKEEKYKD-AIHFYNKSLAE 108 (131)
T ss_dssp ---HHHHHHHHHHHHTTCHHH-HHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHhccHHH-HHHHHHHHHHh
Confidence 777778877777666543 34445555443
No 206
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.74 E-value=4.9e-08 Score=92.81 Aligned_cols=134 Identities=18% Similarity=0.177 Sum_probs=98.4
Q ss_pred HHHHHHHhhHHHHhccC-----------------HHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHH
Q psy8368 154 RAQELGASGKNAFNDKN-----------------IVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNN 216 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~-----------------~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~k 216 (372)
.+..+...|..++..|+ |..|+..|.+++.+...... ......++.++|.+|..
T Consensus 165 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~la~~~~~ 235 (411)
T 4a1s_A 165 EGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGD---------RGAQGRACGNLGNTYYL 235 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTC---------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHH
Confidence 35577889999999999 99999999999887654311 12235688899999999
Q ss_pred ccCHHHHHHHHHHHHHhhccCCCC--chhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc---cHHHHHHHHHHHHHH
Q psy8368 217 NKQYKLTCDCASKALQFASHFATK--DVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS---VRAEIDKEILKADLG 291 (372)
Q Consensus 217 l~~y~~Ai~~~~~aL~~~~~~~p~--~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~---~~~~~~~~l~~~~~~ 291 (372)
+|+|++|+.++++++++.+..... ...+++.+|.+|..+|++++|+..|++++.+.|... ....+...++.+...
T Consensus 236 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 315 (411)
T 4a1s_A 236 LGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTL 315 (411)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999743221111 233888999999999999999999999999887542 112555666666555
Q ss_pred HHHHH
Q psy8368 292 NQQYQ 296 (372)
Q Consensus 292 ~~~~~ 296 (372)
.+++.
T Consensus 316 ~g~~~ 320 (411)
T 4a1s_A 316 LHEFN 320 (411)
T ss_dssp TTCHH
T ss_pred cCCHH
Confidence 55443
No 207
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.72 E-value=1.2e-07 Score=73.06 Aligned_cols=83 Identities=12% Similarity=0.052 Sum_probs=67.2
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|+.+|..++|..|+..|.+|++..+....... ....++.++|.||.++|+++.|+.+++++++
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~--------~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~-- 74 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTI--------DKVSVLDYLSYAVYQQGDLDKALLLTKKLLE-- 74 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSS--------CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcc--------cHHHHHHHHHHHHHHccCHHHHHHHHHHHHh--
Confidence 456789999999999999999999999998754321111 1157788999999999999999999999997
Q ss_pred ccCCCCchhHHHHHH
Q psy8368 235 SHFATKDVKLFFVWG 249 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a 249 (372)
++|++..++.+++
T Consensus 75 --l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 75 --LDPEHQRANGNLK 87 (104)
T ss_dssp --HCTTCHHHHHHHH
T ss_pred --cCCCCHHHHhhHH
Confidence 8899888877776
No 208
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.71 E-value=2.2e-07 Score=93.39 Aligned_cols=116 Identities=2% Similarity=-0.129 Sum_probs=107.0
Q ss_pred HHHHHHhhHHHHhccC----------HHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHcc--CHHH
Q psy8368 155 AQELGASGKNAFNDKN----------IVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNK--QYKL 222 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~----------~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~--~y~~ 222 (372)
.+.+..+|..+...++ +++|+..|.+++...++. ..++++++.++.+++ +|++
T Consensus 63 ~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~---------------y~aW~hR~w~l~~l~~~~~~~ 127 (567)
T 1dce_A 63 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKS---------------YGTWHHRCWLLSRLPEPNWAR 127 (567)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHTCSSCCHHH
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcccccHHH
Confidence 5677888888888888 999999999999998776 689999999999999 7799
Q ss_pred HHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcC-CHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHH
Q psy8368 223 TCDCASKALQFASHFATKDVKLFFVWGKALIGLQ-EWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGN 292 (372)
Q Consensus 223 Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~-~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~ 292 (372)
++.+|+++++ .||.|..||+.|+.++..++ .++++++++.++++++|+|. .++.....+...+
T Consensus 128 el~~~~k~l~----~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~---saW~~r~~ll~~l 191 (567)
T 1dce_A 128 ELELCARFLE----ADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY---SSWHYRSCLLPQL 191 (567)
T ss_dssp HHHHHHHHHH----HCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCH---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHh----hccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCc---cHHHHHHHHHHhh
Confidence 9999999998 99999999999999999999 99999999999999999999 8988888887664
No 209
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.70 E-value=9e-08 Score=83.42 Aligned_cols=112 Identities=12% Similarity=-0.019 Sum_probs=82.7
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHcc----CHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNK----QYKLTCDCAS 228 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~----~y~~Ai~~~~ 228 (372)
..+..+...|..++..+++.+|+..|++|++.- . ...++|+|.+|.. + ++.+|+.+++
T Consensus 16 g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g--~---------------~~a~~~lg~~y~~-~g~~~~~~~A~~~~~ 77 (212)
T 3rjv_A 16 GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQG--D---------------GDALALLAQLKIR-NPQQADYPQARQLAE 77 (212)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT--C---------------HHHHHHHHHHTTS-STTSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC--C---------------HHHHHHHHHHHHc-CCCCCCHHHHHHHHH
Confidence 346788889999999999999999999998752 1 4566777777776 5 7777777777
Q ss_pred HHHHhhccCCCCchhHHHHHHHHHHh----cCCHHHHHHHHHHHHhhcCC--CccHHHHHHHHHHHHHH
Q psy8368 229 KALQFASHFATKDVKLFFVWGKALIG----LQEWTSAIKHLKTARKLAAK--DSVRAEIDKEILKADLG 291 (372)
Q Consensus 229 ~aL~~~~~~~p~~~ka~~r~a~a~~~----l~~~e~A~~~~~~al~l~p~--~~~~~~~~~~l~~~~~~ 291 (372)
++++ +.++.+++++|.+|.. .+++++|+..|++|++..|. ++ .+...|+.+...
T Consensus 78 ~A~~------~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~---~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 78 KAVE------AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAV---DAQMLLGLIYAS 137 (212)
T ss_dssp HHHH------TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHH---HHHHHHHHHHHH
T ss_pred HHHH------CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchH---HHHHHHHHHHHc
Confidence 7764 4677777777777776 77777777777777777763 35 666666666544
No 210
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.70 E-value=1.3e-07 Score=72.94 Aligned_cols=84 Identities=12% Similarity=-0.013 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhhccC---CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHH
Q psy8368 205 RVYRNLMVCYNNNKQYKLTCDCASKALQFASHF---ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEI 281 (372)
Q Consensus 205 ~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~---~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~ 281 (372)
.-++.+|..+++.++|..|+.+++.|++....- .+.....+..+|.||..+|+++.|+..++++++++|++. .+
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~---~~ 82 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ---RA 82 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HH
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH---HH
Confidence 446789999999999999999999999854221 245778899999999999999999999999999999999 77
Q ss_pred HHHHHHHHHH
Q psy8368 282 DKEILKADLG 291 (372)
Q Consensus 282 ~~~l~~~~~~ 291 (372)
...+..+...
T Consensus 83 ~~n~~~~~~~ 92 (104)
T 2v5f_A 83 NGNLKYFEYI 92 (104)
T ss_dssp HHHHHHHHHH
T ss_pred HhhHHHHHHH
Confidence 7776655443
No 211
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.68 E-value=7.6e-08 Score=91.61 Aligned_cols=105 Identities=10% Similarity=0.191 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhcc------------CCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASH------------FATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKL 271 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~------------~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l 271 (372)
...+.++|.++++.++|++|+..|+++|++.+. ++|.+..+|+++|.+|..+|+|++|+.+|++|+++
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 567889999999999999999999999974332 56778899999999999999999999999999999
Q ss_pred cCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q psy8368 272 AAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSSSSS 312 (372)
Q Consensus 272 ~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (372)
+|++. .+...++.+...++++.++ ...|++.+.....
T Consensus 303 ~p~~~---~a~~~lg~~~~~~g~~~eA-~~~l~~Al~l~P~ 339 (370)
T 1ihg_A 303 DPSNT---KALYRRAQGWQGLKEYDQA-LADLKKAQEIAPE 339 (370)
T ss_dssp CTTCH---HHHHHHHHHHHHTTCHHHH-HHHHHHHHHHCTT
T ss_pred CchhH---HHHHHHHHHHHHccCHHHH-HHHHHHHHHhCCC
Confidence 99999 9999999998888877543 4455555554443
No 212
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.67 E-value=2.4e-07 Score=80.63 Aligned_cols=112 Identities=11% Similarity=-0.053 Sum_probs=96.2
Q ss_pred HHHHHHHhhHHHHhcc----CHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHH----ccCHHHHHH
Q psy8368 154 RAQELGASGKNAFNDK----NIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNN----NKQYKLTCD 225 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g----~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~k----l~~y~~Ai~ 225 (372)
.+..+...|..+.. + ++.+|+..|++|+..- . ...++|+|.+|.. .+++.+|+.
T Consensus 49 ~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~g--~---------------~~a~~~Lg~~y~~g~g~~~d~~~A~~ 110 (212)
T 3rjv_A 49 DGDALALLAQLKIR-NPQQADYPQARQLAEKAVEAG--S---------------KSGEIVLARVLVNRQAGATDVAHAIT 110 (212)
T ss_dssp CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHTT--C---------------HHHHHHHHHHHTCGGGSSCCHHHHHH
T ss_pred CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHCC--C---------------HHHHHHHHHHHHcCCCCccCHHHHHH
Confidence 35677888999888 7 8999999999997641 1 5788999999998 899999999
Q ss_pred HHHHHHHhhccCCC--CchhHHHHHHHHHHh----cCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHH
Q psy8368 226 CASKALQFASHFAT--KDVKLFFVWGKALIG----LQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLG 291 (372)
Q Consensus 226 ~~~~aL~~~~~~~p--~~~ka~~r~a~a~~~----l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~ 291 (372)
+++++++ .++ .++.+++++|.+|.. .+++++|+.+|++|+++ |.+. .+...|..+...
T Consensus 111 ~~~~A~~----~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~---~a~~~Lg~~y~~ 174 (212)
T 3rjv_A 111 LLQDAAR----DSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTG---YAEYWAGMMFQQ 174 (212)
T ss_dssp HHHHHTS----STTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTT---HHHHHHHHHHHH
T ss_pred HHHHHHH----cCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCH---HHHHHHHHHHHc
Confidence 9999997 766 459999999999999 89999999999999999 7777 777778777653
No 213
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.65 E-value=2.7e-07 Score=69.70 Aligned_cols=82 Identities=12% Similarity=-0.033 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHccC---HHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHH
Q psy8368 204 CRVYRNLMVCYNNNKQ---YKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAE 280 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~---y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~ 280 (372)
..++..+|.+++-.++ ..+|...++++|+ +||+++++++-+|.+++..|+|.+|+..++++++.+|.++.+..
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~----~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~~~~ 81 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQ----LEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLDRVT 81 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCCHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH----HCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHH
Confidence 4678888998876665 7999999999998 99999999999999999999999999999999999999765555
Q ss_pred HHHHHHHHH
Q psy8368 281 IDKEILKAD 289 (372)
Q Consensus 281 ~~~~l~~~~ 289 (372)
+...+..++
T Consensus 82 i~~~I~~A~ 90 (93)
T 3bee_A 82 IIESINKAK 90 (93)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 665555544
No 214
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.63 E-value=3.5e-08 Score=77.23 Aligned_cols=87 Identities=11% Similarity=0.056 Sum_probs=71.6
Q ss_pred HccCHHHHHHHHHHHHHhhccC---CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHH
Q psy8368 216 NNKQYKLTCDCASKALQFASHF---ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGN 292 (372)
Q Consensus 216 kl~~y~~Ai~~~~~aL~~~~~~---~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~ 292 (372)
.+|+|++|+.+++++++ + +|++..+++.+|.+|..+|+|++|+..|+++++++|++. .+...++.+....
T Consensus 2 ~~g~~~~A~~~~~~al~----~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~l~~~~~~~ 74 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIA----SGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQ---ALRVFYAMVLYNL 74 (117)
T ss_dssp -----CCCHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHH----cCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCch---HHHHHHHHHHHHc
Confidence 46899999999999997 7 689999999999999999999999999999999999999 9999999999888
Q ss_pred HHHHHHHHHHHHhhccCC
Q psy8368 293 QQYQKETKARCMKMFSSS 310 (372)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~ 310 (372)
+++.++. ..+.+.+...
T Consensus 75 g~~~~A~-~~~~~al~~~ 91 (117)
T 3k9i_A 75 GRYEQGV-ELLLKIIAET 91 (117)
T ss_dssp TCHHHHH-HHHHHHHHHH
T ss_pred CCHHHHH-HHHHHHHHhC
Confidence 8775543 4455554433
No 215
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.60 E-value=8e-07 Score=89.35 Aligned_cols=125 Identities=7% Similarity=-0.043 Sum_probs=104.8
Q ss_pred HHhccCH-HHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccC----------HHHHHHHHHHHHHh
Q psy8368 165 AFNDKNI-VSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQ----------YKLTCDCASKALQF 233 (372)
Q Consensus 165 ~~~~g~~-~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~----------y~~Ai~~~~~aL~~ 233 (372)
..+.|.| ++|+..|.+++.+.+.. ..++++++.++.++++ |++++.+++++++
T Consensus 38 ~~~~~~~~eeal~~~~~~l~~nP~~---------------~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~- 101 (567)
T 1dce_A 38 KRQAGELDESVLELTSQILGANPDF---------------ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLR- 101 (567)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHcCCCCHHHHHHHHHHHHHCchh---------------HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHH-
Confidence 3444544 67799999999998776 7899999999999999 9999999999998
Q ss_pred hccCCCCchhHHHHHHHHHHhcC--CHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q psy8368 234 ASHFATKDVKLFFVWGKALIGLQ--EWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSSSS 311 (372)
Q Consensus 234 ~~~~~p~~~ka~~r~a~a~~~l~--~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (372)
.+|.+..||+.|+.++..++ ++++|++.+.++++++|.|. .++....-+...++...+.+-..+.++.....
T Consensus 102 ---~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~---~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p 175 (567)
T 1dce_A 102 ---VNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF---HCWDYRRFVAAQAAVAPAEELAFTDSLITRNF 175 (567)
T ss_dssp ---HCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTC
T ss_pred ---hCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccc---cHHHHHHHHHHHcCCChHHHHHHHHHHHHHCC
Confidence 99999999999999999999 77999999999999999999 99988888877766223445555555554433
No 216
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.60 E-value=1.1e-07 Score=78.81 Aligned_cols=91 Identities=14% Similarity=0.095 Sum_probs=75.6
Q ss_pred HHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCH----------HHHHHHHHHHHhhcCCCccHHHHHHH
Q psy8368 215 NNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEW----------TSAIKHLKTARKLAAKDSVRAEIDKE 284 (372)
Q Consensus 215 ~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~----------e~A~~~~~~al~l~p~~~~~~~~~~~ 284 (372)
-+++.|++|+..++++++ ++|+++.+|+++|.++..++++ ++|+..|++|++++|++. .++..
T Consensus 13 ~r~~~feeA~~~~~~Ai~----l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~---~A~~~ 85 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYK----SNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKD---EAVWC 85 (158)
T ss_dssp HHHHHHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCH---HHHHH
T ss_pred HHHhHHHHHHHHHHHHHH----HCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcH---HHHHH
Confidence 457889999999999998 9999999999999999999875 599999999999999999 99999
Q ss_pred HHHHHHHHHH----------HHHHHHHHHHhhccCCCC
Q psy8368 285 ILKADLGNQQ----------YQKETKARCMKMFSSSSS 312 (372)
Q Consensus 285 l~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 312 (372)
++.+...+.. .-.+....|++.+...+.
T Consensus 86 LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~ 123 (158)
T 1zu2_A 86 IGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPD 123 (158)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCC
Confidence 9999887752 233444555555554443
No 217
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.57 E-value=4.7e-07 Score=83.74 Aligned_cols=131 Identities=5% Similarity=-0.104 Sum_probs=110.1
Q ss_pred HHHHHhhHHH----Hhc---cCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHH--HHHHH
Q psy8368 156 QELGASGKNA----FND---KNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYK--LTCDC 226 (372)
Q Consensus 156 ~~~k~~Gn~~----~~~---g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~--~Ai~~ 226 (372)
..+..++..+ ... +++.+++..+.+++...+.. ..++++++.++.+++.|+ +++.+
T Consensus 104 ~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkn---------------y~aW~~R~~vl~~l~~~~~~~EL~~ 168 (306)
T 3dra_A 104 QIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKN---------------HHVWSYRKWLVDTFDLHNDAKELSF 168 (306)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHhcccChHHHHHH
Confidence 3455556665 444 78999999999999988776 689999999999999999 99999
Q ss_pred HHHHHHhhccCCCCchhHHHHHHHHHHhcCC------HHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHH
Q psy8368 227 ASKALQFASHFATKDVKLFFVWGKALIGLQE------WTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETK 300 (372)
Q Consensus 227 ~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~------~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 300 (372)
|+++++ .+|.|..||..|+.++..++. ++++++++.+++.++|+|. .++..+..+....+.......
T Consensus 169 ~~~~i~----~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~---SaW~y~~~ll~~~~~~~~~~~ 241 (306)
T 3dra_A 169 VDKVID----TDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNP---STWNYLLGIHERFDRSITQLE 241 (306)
T ss_dssp HHHHHH----HCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCH---HHHHHHHHHHHHTTCCGGGGH
T ss_pred HHHHHH----hCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCc---cHHHHHHHHHHhcCCChHHHH
Confidence 999998 999999999999999999998 9999999999999999999 999988888776664433344
Q ss_pred HHHHhhcc
Q psy8368 301 ARCMKMFS 308 (372)
Q Consensus 301 ~~~~~~~~ 308 (372)
....+++.
T Consensus 242 ~~~~~~~~ 249 (306)
T 3dra_A 242 EFSLQFVD 249 (306)
T ss_dssp HHHHTTEE
T ss_pred HHHHHHHh
Confidence 44444443
No 218
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.56 E-value=1.2e-06 Score=80.99 Aligned_cols=118 Identities=6% Similarity=-0.102 Sum_probs=105.2
Q ss_pred HHHHHHHhhHHHHhcc--CHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHH----HHc---cCHHHHH
Q psy8368 154 RAQELGASGKNAFNDK--NIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCY----NNN---KQYKLTC 224 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g--~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~----~kl---~~y~~Ai 224 (372)
..+.+..+|..+...+ ++.+|+..+..+|...|+. ..+++.++.++ ..+ +++.+++
T Consensus 66 ~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~---------------y~aW~~R~~iL~~~~~~l~~~~~~~~EL 130 (306)
T 3dra_A 66 HYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKN---------------YQIWNYRQLIIGQIMELNNNDFDPYREF 130 (306)
T ss_dssp CHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTC---------------CHHHHHHHHHHHHHHHHTTTCCCTHHHH
T ss_pred HHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCccc---------------HHHHHHHHHHHHHHHHhccccCCHHHHH
Confidence 3567888999999888 9999999999999988776 57888999988 777 7899999
Q ss_pred HHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHH--HHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHH
Q psy8368 225 DCASKALQFASHFATKDVKLFFVWGKALIGLQEWT--SAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQ 293 (372)
Q Consensus 225 ~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e--~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~ 293 (372)
..|+++|+ .+|.|..||+.|+.++..++.++ ++++.+.++++++|.|. .++.....+...+.
T Consensus 131 ~~~~~~l~----~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~---sAW~~R~~ll~~l~ 194 (306)
T 3dra_A 131 DILEAMLS----SDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNN---SAWSHRFFLLFSKK 194 (306)
T ss_dssp HHHHHHHH----HCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHSSG
T ss_pred HHHHHHHH----hCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHhcc
Confidence 99999998 99999999999999999999999 99999999999999999 88877777665543
No 219
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.54 E-value=1.6e-06 Score=81.51 Aligned_cols=135 Identities=8% Similarity=0.039 Sum_probs=102.9
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+..+...|..++..|+|..|...|.+++...+..... .....+++++|.++..+|+|.+|+.++++++..
T Consensus 52 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~ 122 (373)
T 1hz4_A 52 RIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVW---------HYALWSLIQQSEILFAQGFLQTAWETQEKAFQL 122 (373)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcH---------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 45567788999999999999999999999887553211 122567889999999999999999999999986
Q ss_pred hccCC----CCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc--cHHHHHHHHHHHHHHHHHHHH
Q psy8368 234 ASHFA----TKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS--VRAEIDKEILKADLGNQQYQK 297 (372)
Q Consensus 234 ~~~~~----p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~--~~~~~~~~l~~~~~~~~~~~~ 297 (372)
.+... |....++..+|.+|..+|++++|+..+.+++.+.|... ....+...+..+....+++.+
T Consensus 123 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 192 (373)
T 1hz4_A 123 INEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDN 192 (373)
T ss_dssp HHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHH
T ss_pred HHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHH
Confidence 54322 34567888999999999999999999999999988632 112455566666665555543
No 220
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.54 E-value=3.9e-06 Score=78.24 Aligned_cols=116 Identities=2% Similarity=-0.132 Sum_probs=98.8
Q ss_pred HHHHHHhhHHHHhccC----------HHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccC--HHH
Q psy8368 155 AQELGASGKNAFNDKN----------IVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQ--YKL 222 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~----------~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~--y~~ 222 (372)
.+.+..++..+...+. +.+++..+..++...|+. ..++++++.++.+++. |.+
T Consensus 64 ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKn---------------y~aW~hR~wlL~~l~~~~~~~ 128 (331)
T 3dss_A 64 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKS---------------YGTWHHRCWLLSRLPEPNWAR 128 (331)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHCSSCCHHH
T ss_pred HHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHhccCcccHHH
Confidence 3444455555554443 788999999999887776 6899999999999994 999
Q ss_pred HHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCC-HHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHH
Q psy8368 223 TCDCASKALQFASHFATKDVKLFFVWGKALIGLQE-WTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGN 292 (372)
Q Consensus 223 Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~-~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~ 292 (372)
++.+|+++++ .+|.|..||+.++.+...+|. ++++++++.++++.+|+|. .++.....+...+
T Consensus 129 EL~~~~k~l~----~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~---SAW~~R~~ll~~l 192 (331)
T 3dss_A 129 ELELCARFLE----ADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY---SSWHYRSCLLPQL 192 (331)
T ss_dssp HHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCH---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----hCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHh
Confidence 9999999998 999999999999999999999 6999999999999999999 8888777776655
No 221
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.50 E-value=1.7e-06 Score=85.70 Aligned_cols=135 Identities=12% Similarity=-0.048 Sum_probs=107.5
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
...+...|..+.+.|++++|...|.+++...+..+ ..++.+++.++.++|++++|+..+.+|++
T Consensus 321 ~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~--------------~~~~~~~~~~~~~~~~~~~A~~~~~~Al~-- 384 (530)
T 2ooe_A 321 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDP--------------TLVYIQYMKFARRAEGIKSGRMIFKKARE-- 384 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCc--------------hHHHHHHHHHHHHhcCHHHHHHHHHHHHh--
Confidence 34566778888889999999999999998743321 24788999999999999999999999997
Q ss_pred ccCCCCchhHHHHHHHH-HHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q psy8368 235 SHFATKDVKLFFVWGKA-LIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSSSS 311 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a-~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (372)
..|.+...+...+.. +..+|++++|+..|+++++..|++. .++..+..+....++. ...+..|.+.+....
T Consensus 385 --~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~---~~~~~~~~~~~~~g~~-~~Ar~~~~~al~~~~ 456 (530)
T 2ooe_A 385 --DARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIP---EYVLAYIDYLSHLNED-NNTRVLFERVLTSGS 456 (530)
T ss_dssp --CTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCH---HHHHHHHHHHTTTTCH-HHHHHHHHHHHHSCC
T ss_pred --ccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCH---HHHHHHHHHHHhCCCH-hhHHHHHHHHHhccC
Confidence 777777777776655 4469999999999999999999999 8888888887665544 345667777665543
No 222
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.48 E-value=3.5e-07 Score=69.55 Aligned_cols=63 Identities=13% Similarity=0.107 Sum_probs=58.2
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
+..+...|..++..|+|++|+..|++++...+.. ..+++++|.||.++|++++|+..++++++
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 69 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPDY---------------VGTYYHLGKLYERLDRTDDAIDTYAQGIE 69 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------THHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 4567889999999999999999999999997665 47899999999999999999999999997
No 223
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.48 E-value=4.2e-07 Score=76.36 Aligned_cols=111 Identities=11% Similarity=-0.030 Sum_probs=87.1
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCC--------------ChHHHHHHHHH------HHHHHHHHHHHH
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVT--------------NYEDQMQLEEY------LCRVYRNLMVCY 214 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~--------------~~~~~~~~~~l------~~~l~~Nla~~~ 214 (372)
...+...|..+...|++++|+..|++++...+ .+.. .......+... ...+++++|.++
T Consensus 40 ~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~ 118 (176)
T 2r5s_A 40 GDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQY 118 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 56788899999999999999999988876543 1100 00001111111 146899999999
Q ss_pred HHccCHHHHHHHHHHHHHhhccCCCCc--hhHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy8368 215 NNNKQYKLTCDCASKALQFASHFATKD--VKLFFVWGKALIGLQEWTSAIKHLKTARK 270 (372)
Q Consensus 215 ~kl~~y~~Ai~~~~~aL~~~~~~~p~~--~ka~~r~a~a~~~l~~~e~A~~~~~~al~ 270 (372)
..+|++++|+..++++++ .+|++ ..+++.+|.++..+|++++|+..|++++.
T Consensus 119 ~~~g~~~~A~~~~~~~l~----~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 119 NQVGRDEEALELLWNILK----VNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHTTCHHHHHHHHHHHHT----TCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHcccHHHHHHHHHHHHH----hCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 999999999999999997 88875 56999999999999999999999999875
No 224
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.44 E-value=4e-06 Score=78.66 Aligned_cols=110 Identities=8% Similarity=-0.087 Sum_probs=97.5
Q ss_pred HHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhhccCCCCchh
Q psy8368 165 AFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNK-QYKLTCDCASKALQFASHFATKDVK 243 (372)
Q Consensus 165 ~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~-~y~~Ai~~~~~aL~~~~~~~p~~~k 243 (372)
..+....++|+..+.++|.+.+.. ..+++.++.++..++ .+++++..++.+|. .+|.+..
T Consensus 64 ~~~~e~se~AL~lt~~~L~~nP~~---------------ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~----~nPKny~ 124 (349)
T 3q7a_A 64 AAKEEKSERALELTEIIVRMNPAH---------------YTVWQYRFSLLTSLNKSLEDELRLMNEFAV----QNLKSYQ 124 (349)
T ss_dssp HHTTCCSHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCCHHHHHHHHHHHHH----TTCCCHH
T ss_pred HHhCCCCHHHHHHHHHHHHhCchh---------------HHHHHHHHHHHHHhhhhHHHHHHHHHHHHH----hCCCcHH
Confidence 344456679999999999998776 689999999999999 59999999999998 9999999
Q ss_pred HHHHHHHHHHhc-C-CHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHH
Q psy8368 244 LFFVWGKALIGL-Q-EWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQ 296 (372)
Q Consensus 244 a~~r~a~a~~~l-~-~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~ 296 (372)
+|+.|+.++..+ + ++++++..+.++++++|.|. .++....-+...+....
T Consensus 125 aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy---~AW~~R~wvl~~l~~~~ 176 (349)
T 3q7a_A 125 VWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNY---HTWAYLHWLYSHFSTLG 176 (349)
T ss_dssp HHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCH---HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHhcccc
Confidence 999999999998 8 99999999999999999999 88888777776666554
No 225
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.44 E-value=2.8e-06 Score=67.21 Aligned_cols=83 Identities=10% Similarity=0.038 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHccCHHH---HHHHHHHHHHhhccCC-C-CchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccH
Q psy8368 204 CRVYRNLMVCYNNNKQYKL---TCDCASKALQFASHFA-T-KDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVR 278 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~---Ai~~~~~aL~~~~~~~-p-~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~ 278 (372)
....+|+|.|+.+..+... +|..++..++ .+ | .+...+|.+|.+|+++|+|+.|+.+++.+|+++|+|.
T Consensus 35 ~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~----~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~-- 108 (126)
T 1nzn_A 35 KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLP----KGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNN-- 108 (126)
T ss_dssp HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTT----TSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh----cCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCH--
Confidence 4678899999999887666 9999999886 44 5 5788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy8368 279 AEIDKEILKADLGNQ 293 (372)
Q Consensus 279 ~~~~~~l~~~~~~~~ 293 (372)
.+..+...+..++.
T Consensus 109 -QA~~Lk~~i~~~i~ 122 (126)
T 1nzn_A 109 -QAKELERLIDKAMK 122 (126)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHH
Confidence 88877777766654
No 226
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.44 E-value=8.2e-07 Score=81.08 Aligned_cols=114 Identities=7% Similarity=-0.077 Sum_probs=90.5
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhcc-------------CCChHHHHHHHHH------HHHHHHHHHHHH
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQ-------------VTNYEDQMQLEEY------LCRVYRNLMVCY 214 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~-------------~~~~~~~~~~~~l------~~~l~~Nla~~~ 214 (372)
....+...|..+...|++++|+..|.+++...+... ....+....+... ...+++++|.+|
T Consensus 150 ~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l 229 (287)
T 3qou_A 150 NGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQL 229 (287)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHH
Confidence 367899999999999999999999998876533110 0000011111111 146899999999
Q ss_pred HHccCHHHHHHHHHHHHHhhccCCCCc--hhHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q psy8368 215 NNNKQYKLTCDCASKALQFASHFATKD--VKLFFVWGKALIGLQEWTSAIKHLKTARKL 271 (372)
Q Consensus 215 ~kl~~y~~Ai~~~~~aL~~~~~~~p~~--~ka~~r~a~a~~~l~~~e~A~~~~~~al~l 271 (372)
...|++++|+..+.++++ .+|++ ..++.+++.++..+|+.++|...|++++..
T Consensus 230 ~~~g~~~~A~~~l~~~l~----~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~~ 284 (287)
T 3qou_A 230 HQVGRNEEALELLFGHLR----XDLTAADGQTRXTFQEILAALGTGDALASXYRRQLYA 284 (287)
T ss_dssp HHTTCHHHHHHHHHHHHH----HCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHcccHHHHHHHHHHHHh----cccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 999999999999999998 89998 889999999999999999999999999863
No 227
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.42 E-value=3.2e-06 Score=68.36 Aligned_cols=89 Identities=19% Similarity=0.151 Sum_probs=79.5
Q ss_pred hhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhhcc
Q psy8368 161 SGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNN----NKQYKLTCDCASKALQFASH 236 (372)
Q Consensus 161 ~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~k----l~~y~~Ai~~~~~aL~~~~~ 236 (372)
.|..+...+.+.+|+..|++|.+.- . ...++|+|.+|.. .+++.+|+.+++++.+
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~g--~---------------~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~---- 89 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACELN--S---------------GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACG---- 89 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHTT--C---------------HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHH----
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcCC--C---------------HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHc----
Confidence 7888888888999999999998762 1 5788999999999 8999999999999996
Q ss_pred CCCCchhHHHHHHHHHHh----cCCHHHHHHHHHHHHhhc
Q psy8368 237 FATKDVKLFFVWGKALIG----LQEWTSAIKHLKTARKLA 272 (372)
Q Consensus 237 ~~p~~~ka~~r~a~a~~~----l~~~e~A~~~~~~al~l~ 272 (372)
. .++.+++++|.+|.. .+++++|+.+|++|.+..
T Consensus 90 ~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 90 L--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp T--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred C--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC
Confidence 3 789999999999999 899999999999999874
No 228
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.38 E-value=1e-06 Score=80.19 Aligned_cols=134 Identities=13% Similarity=-0.022 Sum_probs=104.2
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
.......+..+...|+|.+|...|..++..-+.. . .++++|.++++.++|.+|+.+++.++.
T Consensus 102 ~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~---------------~-~~~~~a~l~~~~~r~~dA~~~l~~a~~-- 163 (282)
T 4f3v_A 102 LAITMGFAACEAAQGNYADAMEALEAAPVAGSEH---------------L-VAWMKAVVYGAAERWTDVIDQVKSAGK-- 163 (282)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHH---------------H-HHHHHHHHHHHTTCHHHHHHHHTTGGG--
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCch---------------H-HHHHHHHHHHHcCCHHHHHHHHHHhhc--
Confidence 3445566888889999999999998777543221 4 788999999999999999999998885
Q ss_pred ccCC-CCc-hhHHHHHHHHHHhcCCHHHHHHHHHHHHhhc--CC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q psy8368 235 SHFA-TKD-VKLFFVWGKALIGLQEWTSAIKHLKTARKLA--AK-DSVRAEIDKEILKADLGNQQYQKETKARCMKMFSS 309 (372)
Q Consensus 235 ~~~~-p~~-~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~--p~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (372)
.. |.. ..+++.+|.++..+|++++|+..|++++.-. |. .. ++...++.+...++.. ...+..|++++..
T Consensus 164 --~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~---da~~~~glaL~~lGr~-deA~~~l~~a~a~ 237 (282)
T 4f3v_A 164 --WPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACAR---AIAWYLAMARRSQGNE-SAAVALLEWLQTT 237 (282)
T ss_dssp --CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHH---HHHHHHHHHHHHHTCH-HHHHHHHHHHHHH
T ss_pred --cCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccH---HHHHHHHHHHHHcCCH-HHHHHHHHHHHhc
Confidence 32 221 4589999999999999999999999998544 54 44 6888888888888766 4566777777765
Q ss_pred CCC
Q psy8368 310 SSS 312 (372)
Q Consensus 310 ~~~ 312 (372)
.+.
T Consensus 238 ~P~ 240 (282)
T 4f3v_A 238 HPE 240 (282)
T ss_dssp SCC
T ss_pred CCc
Confidence 443
No 229
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.37 E-value=4e-06 Score=78.70 Aligned_cols=135 Identities=12% Similarity=-0.035 Sum_probs=101.2
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
-.+..+...|..++..|++..|+..+.+++...+.. +. .....+++++|.+|...|+|++|+..+.+++.
T Consensus 12 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~---~~-------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 81 (373)
T 1hz4_A 12 MHAEFNALRAQVAINDGNPDEAERLAKLALEELPPG---WF-------YSRIVATSVLGEVLHCKGELTRSLALMQQTEQ 81 (373)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTT---CH-------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCC---ch-------hHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 345667788999999999999999999999876321 11 12356889999999999999999999999998
Q ss_pred hhccCCCC--chhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCC-----ccHHHHHHHHHHHHHHHHHHHH
Q psy8368 233 FASHFATK--DVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKD-----SVRAEIDKEILKADLGNQQYQK 297 (372)
Q Consensus 233 ~~~~~~p~--~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~-----~~~~~~~~~l~~~~~~~~~~~~ 297 (372)
+.+..... ...+++.+|.++..+|++++|+..+++++.+.+.. +....+...++.+....++..+
T Consensus 82 ~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 153 (373)
T 1hz4_A 82 MARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDE 153 (373)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHH
Confidence 55433222 23457899999999999999999999999986421 2122455666666655555543
No 230
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.36 E-value=1.9e-06 Score=84.89 Aligned_cols=117 Identities=10% Similarity=-0.048 Sum_probs=95.5
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..+..+.+.|..|..+|+|++|+..|+++|.+....-.++. ......++|+|..|..+|+|++|+..+++||.
T Consensus 349 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~H-------p~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~ 421 (490)
T 3n71_A 349 YVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNN-------AQLGMAVMRAGLTNWHAGHIEVGHGMICKAYA 421 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTC-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCC-------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 46788899999999999999999999999998755433222 12367899999999999999999999999998
Q ss_pred hhc-cCCCCc---hhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 233 FAS-HFATKD---VKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 233 ~~~-~~~p~~---~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
+.. .+.|++ .+.+-.++.++..++.|.+|...|.++.+-.-+|.
T Consensus 422 i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~~~~~ 469 (490)
T 3n71_A 422 ILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAALNNQ 469 (490)
T ss_dssp HHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 754 345554 55667899999999999999999999977654444
No 231
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.36 E-value=6.3e-06 Score=76.85 Aligned_cols=120 Identities=7% Similarity=-0.003 Sum_probs=99.5
Q ss_pred HHHHHHHHhhHHHH---hccCHH-HHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccC---------
Q psy8368 153 KRAQELGASGKNAF---NDKNIV-SAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQ--------- 219 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~---~~g~~~-~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~--------- 219 (372)
+.+..++..-+..+ +.|.|. +|+..+.++|.+.|.. .++++.++.++..++.
T Consensus 24 ~ki~~y~~~~~~~~~~~~~~e~s~eaL~~t~~~L~~nP~~---------------ytaWn~Rr~iL~~l~~~~~~~~~~~ 88 (331)
T 3dss_A 24 QKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANPDF---------------ATLWNCRREVLQHLETEKSPEESAA 88 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHTTCTTC---------------HHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchh---------------HHHHHHHHHHHHHhcccccchhhhH
Confidence 44445554444433 567766 7999999999998776 6888999999988876
Q ss_pred -HHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcC--CHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHH
Q psy8368 220 -YKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQ--EWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQ 294 (372)
Q Consensus 220 -y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~--~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~ 294 (372)
+.+++.+++.+|. .+|.|..+|+.|+.++..++ .+++++..+.++++++|.|. .++....-+....+.
T Consensus 89 ~l~~EL~~~~~~L~----~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy---~AW~~R~~vl~~l~~ 159 (331)
T 3dss_A 89 LVKAELGFLESCLR----VNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF---HCWDYRRFVAAQAAV 159 (331)
T ss_dssp HHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHhCc
Confidence 7999999999998 99999999999999999999 49999999999999999999 888777777665544
No 232
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.35 E-value=3.4e-06 Score=79.17 Aligned_cols=117 Identities=4% Similarity=-0.064 Sum_probs=105.8
Q ss_pred HHHHHHhhHHHHhcc-CHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHc-c-CHHHHHHHHHHHH
Q psy8368 155 AQELGASGKNAFNDK-NIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNN-K-QYKLTCDCASKAL 231 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g-~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl-~-~y~~Ai~~~~~aL 231 (372)
.+.+..++..+...+ .+++++..+..+|...++. ..+++.++.++.++ + ++.+++.+|+++|
T Consensus 88 ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKn---------------y~aW~hR~wlL~~l~~~~~~~EL~~~~k~L 152 (349)
T 3q7a_A 88 YTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKS---------------YQVWHHRLLLLDRISPQDPVSEIEYIHGSL 152 (349)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCC---------------HHHHHHHHHHHHHHCCSCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Confidence 467778888998888 5999999999999988776 68999999999998 8 9999999999999
Q ss_pred HhhccCCCCchhHHHHHHHHHHhcCCHH--------HHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHH
Q psy8368 232 QFASHFATKDVKLFFVWGKALIGLQEWT--------SAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQ 293 (372)
Q Consensus 232 ~~~~~~~p~~~ka~~r~a~a~~~l~~~e--------~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~ 293 (372)
+ .+|.|..||+.|+.++..++.++ ++++.+.++++++|.|. .++.....+...+.
T Consensus 153 ~----~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~---SAW~~R~~lL~~l~ 215 (349)
T 3q7a_A 153 L----PDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNN---SAWGWRWYLRVSRP 215 (349)
T ss_dssp S----SCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHTTST
T ss_pred H----hCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHhcc
Confidence 7 99999999999999999999888 99999999999999999 88888877765554
No 233
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.31 E-value=4.6e-06 Score=82.61 Aligned_cols=103 Identities=15% Similarity=0.101 Sum_probs=90.3
Q ss_pred HHHHHHhhHHHHh-------ccCHH-------HHHHHHHHHHH-hhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccC
Q psy8368 155 AQELGASGKNAFN-------DKNIV-------SAVRRYRDAVK-LLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQ 219 (372)
Q Consensus 155 ~~~~k~~Gn~~~~-------~g~~~-------~A~~~y~~al~-~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~ 219 (372)
...+...|..+.. .|++. +|...|.+|+. +.+.. ..++.++|..+.++|+
T Consensus 272 ~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~---------------~~l~~~~~~~~~~~g~ 336 (530)
T 2ooe_A 272 PDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKN---------------MLLYFAYADYEESRMK 336 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSC---------------HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCccc---------------HHHHHHHHHHHHhcCC
Confidence 4566677777775 68877 89999999997 55544 6899999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCch-hHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 220 YKLTCDCASKALQFASHFATKDV-KLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 220 y~~Ai~~~~~aL~~~~~~~p~~~-ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
+++|+..++++++ ++|.++ .+|..++.++..+|++++|+..|.+|++..|.+.
T Consensus 337 ~~~A~~~~~~al~----~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~ 390 (530)
T 2ooe_A 337 YEKVHSIYNRLLA----IEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRH 390 (530)
T ss_dssp HHHHHHHHHHHHH----SSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCT
T ss_pred HHHHHHHHHHHhC----ccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCch
Confidence 9999999999998 888885 6999999999999999999999999999988876
No 234
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.29 E-value=8.4e-06 Score=79.88 Aligned_cols=78 Identities=13% Similarity=-0.053 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHh----cCCHHHHHHHHHHHHhhcCC-
Q psy8368 204 CRVYRNLMVCYNN----NKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIG----LQEWTSAIKHLKTARKLAAK- 274 (372)
Q Consensus 204 ~~l~~Nla~~~~k----l~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~----l~~~e~A~~~~~~al~l~p~- 274 (372)
...++++|.+|.. .+++++|+.+++++++ . .++.+++++|.+|.. .+++++|+..|++|++.+|+
T Consensus 363 ~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~----~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~ 436 (490)
T 2xm6_A 363 KAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAE----Q--GLSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNL 436 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH----T--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHh----C--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCC
Confidence 4678899999999 8999999999999986 3 478899999999998 89999999999999999954
Q ss_pred --CccHHHHHHHHHHHHH
Q psy8368 275 --DSVRAEIDKEILKADL 290 (372)
Q Consensus 275 --~~~~~~~~~~l~~~~~ 290 (372)
+. .+...+..+..
T Consensus 437 ~~~~---~a~~~l~~~~~ 451 (490)
T 2xm6_A 437 FGTE---NRNITEKKLTA 451 (490)
T ss_dssp HHHH---HHHHHHTTSCH
T ss_pred cCCH---HHHHHHHhcCH
Confidence 66 67776666543
No 235
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.29 E-value=3.9e-06 Score=64.86 Aligned_cols=78 Identities=18% Similarity=0.150 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8368 222 LTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKA 301 (372)
Q Consensus 222 ~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 301 (372)
+|+..++++++ .+|++..+++.+|.+|..+|++++|+..|+++++++|++. .++..++.+....+++.+ ...
T Consensus 3 ~a~~~~~~al~----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---~~~~~la~~~~~~g~~~~-A~~ 74 (115)
T 2kat_A 3 AITERLEAMLA----QGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYS---VAWKWLGKTLQGQGDRAG-ARQ 74 (115)
T ss_dssp CHHHHHHHHHT----TTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHHTCHHH-HHH
T ss_pred HHHHHHHHHHH----hCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcH---HHHHHHHHHHHHcCCHHH-HHH
Confidence 57899999997 9999999999999999999999999999999999999999 999999999888776654 334
Q ss_pred HHHhhc
Q psy8368 302 RCMKMF 307 (372)
Q Consensus 302 ~~~~~~ 307 (372)
.|.+.+
T Consensus 75 ~~~~al 80 (115)
T 2kat_A 75 AWESGL 80 (115)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 236
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=98.22 E-value=6.3e-06 Score=79.76 Aligned_cols=101 Identities=14% Similarity=0.153 Sum_probs=73.7
Q ss_pred CCCCCCEEEEEEEEEEcCCceeEeecccCCCcCeEEEcCCCccchHHHHHhccCCCCcEEEEEecCCCccCCCCCCCCCC
Q psy8368 28 NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGEKSDFFASYELCFGALGCPPRIP 107 (372)
Q Consensus 28 ~~~~g~~V~v~y~~~~~~~~~~~dst~~~~~~~~~~~~g~~~~~~~le~~l~~m~~Ge~~~~~i~~~~~yg~~g~~~~ip 107 (372)
.+..||.|+|+|++.. + |+.|+++.. . ++.+.+|++. + |+.+|.||++|+...|.++.
T Consensus 154 ~a~~gD~V~id~~~~~-d-G~~~~~~~~--~-~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF-------------- 211 (433)
T 3gty_X 154 PAEAGDLVRVNMEVYN-E-EGKKLTSRE--Y-EYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY-------------- 211 (433)
T ss_dssp CCCTTSEEEEEEEEEC-T-TSCEEEEEE--E-EEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE--------------
T ss_pred ccCCCCEEEEEEEEEE-C-CEECcCCCC--C-CeEEEecCCc--h-HHHHhCCCCCCceEEEEEee--------------
Confidence 4789999999999874 4 458887643 4 7888899877 4 99999999999999999853
Q ss_pred CCCcEEEEEEEEeeecCccccccccccccccccCcc-CchhHHHHHHHH
Q psy8368 108 AKADLLFEVHLINFSIDPQVVRSSADIESDFIDSQV-EEPAFAKVLKRA 155 (372)
Q Consensus 108 ~~~~~~~~iel~~~~~~~~~~~~~~~~~~~~~~~~~-e~~~~~~~~~~~ 155 (372)
+|.+..|.|+|.+|+ ...+|++.+.|.-... +-.+.++....+
T Consensus 212 aGk~a~F~VtV~~Ik-----~~~lPEldDEfak~~~~~~~tleelk~~i 255 (433)
T 3gty_X 212 EGKKYTYKLEVEEVY-----KRTLPEIGDELAKSVNNEFETLEQLKESL 255 (433)
T ss_dssp TTEEEEEEEEEEEEE-----EECCCCSSHHHHHTTCSSCCSHHHHHHHH
T ss_pred CCCeEEEEEEEEEEE-----EecCCcccHHHHHHhCCCCCCHHHHHHHH
Confidence 466899999999998 2345666666553332 233444444433
No 237
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.21 E-value=2.5e-05 Score=64.49 Aligned_cols=124 Identities=10% Similarity=-0.014 Sum_probs=92.3
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhc
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFAS 235 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~ 235 (372)
..+++....++..+.|+.|+..+..++.+.+..+..-.. .....++..+|.+++..++|.+|...|++||+...
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp------~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k 94 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSP------PQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKK 94 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCH------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccH------HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 356778888999999999999999999887554422111 12356888999999999999999999999987654
Q ss_pred cCC---------------------CCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHH
Q psy8368 236 HFA---------------------TKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKAD 289 (372)
Q Consensus 236 ~~~---------------------p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~ 289 (372)
.+. +......|++|.||.+++++.+|+..++.. |.-.+...+...|+++.
T Consensus 95 ~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I----p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 95 ALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI----PSRQRTPKINMLLANLY 165 (167)
T ss_dssp CC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS----CGGGCCHHHHHHHHHHC
T ss_pred HHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC----CchhcCHHHHHHHHHHh
Confidence 331 112368899999999999999999887654 32222226777777654
No 238
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.17 E-value=1.8e-05 Score=75.47 Aligned_cols=124 Identities=14% Similarity=0.054 Sum_probs=87.6
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccC-----------------CCh-HHHHH-HH------------H
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQV-----------------TNY-EDQMQ-LE------------E 201 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~-----------------~~~-~~~~~-~~------------~ 201 (372)
.....+...|+.|+..|+|++|+..|.+++.+.+.... ... +.... .. .
T Consensus 53 ~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 132 (434)
T 4b4t_Q 53 EQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVF 132 (434)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCS
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccH
Confidence 44566889999999999999999999999887654321 000 00000 00 1
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCC--CchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 202 YLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFAT--KDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 202 l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p--~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
++..++.++|.+|..+|+|.+|+..+.+++......+. ..+.++...|.+|..+|+|++|...|++++.+.+...
T Consensus 133 ~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~ 209 (434)
T 4b4t_Q 133 LKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIY 209 (434)
T ss_dssp SHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCC
Confidence 22457778888888888888888888888875543332 3556788888888888888888888888888876443
No 239
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.13 E-value=4.2e-05 Score=74.86 Aligned_cols=107 Identities=14% Similarity=0.016 Sum_probs=59.0
Q ss_pred HHHHHHhhHHHHh----ccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHH----ccCHHHHHHH
Q psy8368 155 AQELGASGKNAFN----DKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNN----NKQYKLTCDC 226 (372)
Q Consensus 155 ~~~~k~~Gn~~~~----~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~k----l~~y~~Ai~~ 226 (372)
+..+...|..++. .+++.+|+..|.+|+..- . ...++++|.+|.. .+++++|+.+
T Consensus 75 ~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~--~---------------~~a~~~Lg~~y~~g~g~~~~~~~A~~~ 137 (490)
T 2xm6_A 75 TPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKG--L---------------PQAQQNLGVMYHEGNGVKVDKAESVKW 137 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--C---------------HHHHHHHHHHHHHTSSSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC--C---------------HHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 3445556666666 666666666666665431 0 2345556666655 5566666666
Q ss_pred HHHHHHhhccCCCCchhHHHHHHHHHHh----cCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHH
Q psy8368 227 ASKALQFASHFATKDVKLFFVWGKALIG----LQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKAD 289 (372)
Q Consensus 227 ~~~aL~~~~~~~p~~~ka~~r~a~a~~~----l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~ 289 (372)
++++++ .+++.+++.+|.+|.. .+++++|+..|+++++. ++. .+...|..+.
T Consensus 138 ~~~a~~------~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~--~~~---~a~~~Lg~~y 193 (490)
T 2xm6_A 138 FRLAAE------QGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ--GNV---WSCNQLGYMY 193 (490)
T ss_dssp HHHHHH------TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCH---HHHHHHHHHH
T ss_pred HHHHHH------CCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCH---HHHHHHHHHH
Confidence 666554 2455566666666655 55566666666665543 344 4444444443
No 240
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.06 E-value=3.5e-05 Score=61.15 Aligned_cols=84 Identities=10% Similarity=0.016 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHccC---HHHHHHHHHHHHHhhccCCC-CchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHH
Q psy8368 204 CRVYRNLMVCYNNNKQ---YKLTCDCASKALQFASHFAT-KDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRA 279 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~---y~~Ai~~~~~aL~~~~~~~p-~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~ 279 (372)
....+|.|.|+.+-.+ ..++|..++..++ .+| .....+|-+|.+|.++|+|+.|+.+.+.+|+++|+|.
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~----~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~--- 112 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYK----EAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK--- 112 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHH----HCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCH---
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHh----cCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCH---
Confidence 4678899999998765 5678999999887 567 4678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy8368 280 EIDKEILKADLGNQQ 294 (372)
Q Consensus 280 ~~~~~l~~~~~~~~~ 294 (372)
.+..+...+..++.+
T Consensus 113 QA~~Lk~~Ie~ki~k 127 (134)
T 3o48_A 113 QVGALKSMVEDKIQK 127 (134)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 888888777776654
No 241
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.04 E-value=6.3e-05 Score=71.69 Aligned_cols=103 Identities=11% Similarity=-0.095 Sum_probs=74.7
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
+..+...|+.++..|+|.+|+..+.+++..+...... .....++++++.+|..+|+|.+|...+++++.+.
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDK---------PSLVDVHLLESKVYHKLRNLAKSKASLTAARTAA 205 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCS---------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccc---------hhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 4456678888888888888888888888876554321 2467899999999999999999999999999843
Q ss_pred ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy8368 235 SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARK 270 (372)
Q Consensus 235 ~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~ 270 (372)
+.........+..+..+|.+..+...|..|..
T Consensus 206 ----~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~ 237 (434)
T 4b4t_Q 206 ----NSIYCPTQTVAELDLMSGILHCEDKDYKTAFS 237 (434)
T ss_dssp ----HHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHH
T ss_pred ----hcCCCchHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 33223344556666666665555555655543
No 242
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.02 E-value=7.1e-05 Score=60.13 Aligned_cols=83 Identities=10% Similarity=0.010 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHccC---HHHHHHHHHHHHHhhccCCC-CchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHH
Q psy8368 204 CRVYRNLMVCYNNNKQ---YKLTCDCASKALQFASHFAT-KDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRA 279 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~---y~~Ai~~~~~aL~~~~~~~p-~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~ 279 (372)
....+|.|.|+.+-.+ -.++|..++..++ .+| .....+|.+|.+|+++|+|++|+.+.+.+|+++|+|.
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~----~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~--- 111 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYK----EAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK--- 111 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHH----HCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCH---
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh----cCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcH---
Confidence 4678899999998765 4578889999887 566 4777999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy8368 280 EIDKEILKADLGNQ 293 (372)
Q Consensus 280 ~~~~~l~~~~~~~~ 293 (372)
++..+...+..++.
T Consensus 112 QA~~Lk~~Ie~~i~ 125 (144)
T 1y8m_A 112 QVGALKSMVEDKIQ 125 (144)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88777776665543
No 243
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.97 E-value=5.3e-05 Score=81.78 Aligned_cols=110 Identities=15% Similarity=0.063 Sum_probs=89.2
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhc
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFAS 235 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~ 235 (372)
..+...|+.++..|+|.+|+..|.+|- .|..+|.||.++|+|++|++.+.+|..
T Consensus 1196 ad~~~iGd~le~eg~YeeA~~~Y~kA~-----------------------ny~rLA~tLvkLge~q~AIEaarKA~n--- 1249 (1630)
T 1xi4_A 1196 AHIQQVGDRCYDEKMYDAAKLLYNNVS-----------------------NFGRLASTLVHLGEYQAAVDGARKANS--- 1249 (1630)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhhh-----------------------HHHHHHHHHHHhCCHHHHHHHHHHhCC---
Confidence 356679999999999999999998852 466788999999999999999988864
Q ss_pred cCCC-------------------------CchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHH
Q psy8368 236 HFAT-------------------------KDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADL 290 (372)
Q Consensus 236 ~~~p-------------------------~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~ 290 (372)
..+ .++.-+..++..|...|.|++|+..|++++.++|.+. .+..+|..+..
T Consensus 1250 -~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~---gmftELaiLya 1325 (1630)
T 1xi4_A 1250 -TRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHM---GMFTELAILYS 1325 (1630)
T ss_pred -HHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHh---HHHHHHHHHHH
Confidence 211 1444566888889999999999999999999999998 88888888876
Q ss_pred HHHHH
Q psy8368 291 GNQQY 295 (372)
Q Consensus 291 ~~~~~ 295 (372)
+.+-.
T Consensus 1326 Ky~pe 1330 (1630)
T 1xi4_A 1326 KFKPQ 1330 (1630)
T ss_pred hCCHH
Confidence 65433
No 244
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.96 E-value=5.5e-05 Score=60.96 Aligned_cols=94 Identities=16% Similarity=0.049 Sum_probs=79.8
Q ss_pred ccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHH
Q psy8368 168 DKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFV 247 (372)
Q Consensus 168 ~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r 247 (372)
.+++.+|+..|++|.+.-.. ... +|.+|...+.+++|+.+++++.+ . .++.++++
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~-----------------~a~--lg~~y~~g~~~~~A~~~~~~Aa~----~--g~~~a~~~ 62 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEM-----------------FGC--LSLVSNSQINKQKLFQYLSKACE----L--NSGNGCRF 62 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCT-----------------THH--HHHHTCTTSCHHHHHHHHHHHHH----T--TCHHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCH-----------------hhh--HHHHHHcCCCHHHHHHHHHHHHc----C--CCHHHHHH
Confidence 36789999999999876421 122 89999999999999999999996 3 78999999
Q ss_pred HHHHHHh----cCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHH
Q psy8368 248 WGKALIG----LQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLG 291 (372)
Q Consensus 248 ~a~a~~~----l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~ 291 (372)
+|.+|.. .+++++|+.+|++|.+. .++ .+...|..+...
T Consensus 63 Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~---~a~~~Lg~~y~~ 105 (138)
T 1klx_A 63 LGDFYENGKYVKKDLRKAAQYYSKACGL--NDQ---DGCLILGYKQYA 105 (138)
T ss_dssp HHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCH---HHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCccHHHHHHHHHHHHcC--CCH---HHHHHHHHHHHC
Confidence 9999998 89999999999999987 677 788888877655
No 245
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.95 E-value=6.5e-05 Score=73.04 Aligned_cols=122 Identities=11% Similarity=0.006 Sum_probs=80.1
Q ss_pred HHHHhhHHHHhcc---CHHHHHHHHHHHHHhhhhccC----------------CChHH-HHHHH---HHHHHHHHHHHHH
Q psy8368 157 ELGASGKNAFNDK---NIVSAVRRYRDAVKLLINTQV----------------TNYED-QMQLE---EYLCRVYRNLMVC 213 (372)
Q Consensus 157 ~~k~~Gn~~~~~g---~~~~A~~~y~~al~~~~~~~~----------------~~~~~-~~~~~---~l~~~l~~Nla~~ 213 (372)
.+...|..+...| ++.+|+..|++++..-+.... .+.+. ..-+. .-....++|+|.+
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~g~~~a~~~Lg~~ 257 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIAPGYPASWVSLAQL 257 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHGGGSTHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 5677888898889 999999999998765322110 01100 00000 1113456777777
Q ss_pred -H--HHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcC-----CHHHHHHHHHHHHhhcCCCccHHHHHHHH
Q psy8368 214 -Y--NNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQ-----EWTSAIKHLKTARKLAAKDSVRAEIDKEI 285 (372)
Q Consensus 214 -~--~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~-----~~e~A~~~~~~al~l~p~~~~~~~~~~~l 285 (372)
| ...+++.+|+.+++++++ ++++.|++++|.+|. .| ++++|+.+|++|. |+++ .+...|
T Consensus 258 ~~~~~~~~d~~~A~~~~~~Aa~------~g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~---~A~~~L 324 (452)
T 3e4b_A 258 LYDFPELGDVEQMMKYLDNGRA------ADQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREV---AADYYL 324 (452)
T ss_dssp HHHSGGGCCHHHHHHHHHHHHH------TTCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCH---HHHHHH
T ss_pred HHhCCCCCCHHHHHHHHHHHHH------CCCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCH---HHHHHH
Confidence 3 456777778877777775 347777888887777 44 7788888888777 7777 777777
Q ss_pred HHHHHH
Q psy8368 286 LKADLG 291 (372)
Q Consensus 286 ~~~~~~ 291 (372)
+.+...
T Consensus 325 g~~y~~ 330 (452)
T 3e4b_A 325 GQIYRR 330 (452)
T ss_dssp HHHHHT
T ss_pred HHHHHC
Confidence 766654
No 246
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.95 E-value=6e-05 Score=73.33 Aligned_cols=75 Identities=20% Similarity=0.065 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHcc-----CHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHh----cCCHHHHHHHHHHHHhhcCC
Q psy8368 204 CRVYRNLMVCYNNNK-----QYKLTCDCASKALQFASHFATKDVKLFFVWGKALIG----LQEWTSAIKHLKTARKLAAK 274 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~-----~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~----l~~~e~A~~~~~~al~l~p~ 274 (372)
...++|+|.+|. .| ++.+|+.+++++. +.++.|++++|.+|.. ..++++|+.+|++|.+ +.
T Consensus 283 ~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa-------~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~--~g 352 (452)
T 3e4b_A 283 PRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV-------GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAAR--NG 352 (452)
T ss_dssp HHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT-------TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHT--TT
T ss_pred HHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh-------CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHh--hC
Confidence 467899999998 55 9999999999884 7899999999999987 4599999999999987 45
Q ss_pred CccHHHHHHHHHHHHHH
Q psy8368 275 DSVRAEIDKEILKADLG 291 (372)
Q Consensus 275 ~~~~~~~~~~l~~~~~~ 291 (372)
++ .+...|+.+...
T Consensus 353 ~~---~A~~~Lg~~y~~ 366 (452)
T 3e4b_A 353 QN---SADFAIAQLFSQ 366 (452)
T ss_dssp CT---THHHHHHHHHHS
T ss_pred hH---HHHHHHHHHHHh
Confidence 66 778888887764
No 247
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.85 E-value=8.7e-05 Score=60.74 Aligned_cols=79 Identities=10% Similarity=-0.102 Sum_probs=66.0
Q ss_pred HHHHHHhhHHHHhcc---CHHHHHHHHHHHHHhh-hhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy8368 155 AQELGASGKNAFNDK---NIVSAVRRYRDAVKLL-INTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKA 230 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g---~~~~A~~~y~~al~~~-~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~a 230 (372)
.+..++.|..+.+.. ++++|+..+...++.. +. ....+++|+|..|+++++|.+|+.+|+.+
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~--------------~~rd~lY~LAv~~~kl~~Y~~A~~y~~~l 97 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKE--------------EQRDYVFYLAVGNYRLKEYEKALKYVRGL 97 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHH--------------HHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcc--------------chHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 578889999999977 7779999999988864 21 12578999999999999999999999999
Q ss_pred HHhhccCCCCchhHHHHHHHH
Q psy8368 231 LQFASHFATKDVKLFFVWGKA 251 (372)
Q Consensus 231 L~~~~~~~p~~~ka~~r~a~a 251 (372)
|+ ++|+|..|..-+-.+
T Consensus 98 L~----ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 98 LQ----TEPQNNQAKELERLI 114 (152)
T ss_dssp HH----HCTTCHHHHHHHHHH
T ss_pred Hh----cCCCCHHHHHHHHHH
Confidence 98 999998887654443
No 248
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.81 E-value=0.00024 Score=76.88 Aligned_cols=99 Identities=10% Similarity=0.041 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy8368 150 KVLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASK 229 (372)
Q Consensus 150 ~~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~ 229 (372)
+++.....+...|..+.+.|+|.+|+..|.+|= . ...|.+++.|+.++|+|++|+.++..
T Consensus 1100 ervn~p~vWsqLAKAql~~G~~kEAIdsYiKAd-----D---------------~say~eVa~~~~~lGkyEEAIeyL~m 1159 (1630)
T 1xi4_A 1100 ERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKAD-----D---------------PSSYMEVVQAANTSGNWEELVKYLQM 1159 (1630)
T ss_pred HhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhcC-----C---------------hHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 444556778889999999999999999997761 1 35667778888888888888887766
Q ss_pred HHHhhc-----------------------cCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy8368 230 ALQFAS-----------------------HFATKDVKLFFVWGKALIGLQEWTSAIKHLKTA 268 (372)
Q Consensus 230 aL~~~~-----------------------~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~a 268 (372)
|.+... .++..+...++++|.++...|+|++|+..|.+|
T Consensus 1160 Ark~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1160 ARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV 1221 (1630)
T ss_pred HHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh
Confidence 653110 012223445666777777777777777777665
No 249
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.74 E-value=0.00038 Score=65.36 Aligned_cols=117 Identities=11% Similarity=-0.012 Sum_probs=82.4
Q ss_pred HHHHHHhhHHHHhc---cCHHHHHHHHHHHHHhhhhccC----------------CCh-HHHHHHHH-H-----------
Q psy8368 155 AQELGASGKNAFND---KNIVSAVRRYRDAVKLLINTQV----------------TNY-EDQMQLEE-Y----------- 202 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~---g~~~~A~~~y~~al~~~~~~~~----------------~~~-~~~~~~~~-l----------- 202 (372)
+-.+.-+|..++.. ..+.+|+.+|.+|++..|.... ++. .....+.. +
T Consensus 196 Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~ 275 (372)
T 3ly7_A 196 LLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNN 275 (372)
T ss_dssp GHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCc
Confidence 44556677777754 3468999999999998765421 111 11111110 0
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 203 LCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 203 ~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
...++.-+|..++..|++++|+..+++|+. ++| +.-+|.-+|.++...|++++|++.|.+|+.++|...
T Consensus 276 ~a~~~~alal~~l~~gd~d~A~~~l~rAl~----Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 276 LSIIYQIKAVSALVKGKTDESYQAINTGID----LEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHh----cCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 022444466677778999999999999997 775 467888889999999999999999999999999765
No 250
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.74 E-value=0.00011 Score=70.72 Aligned_cols=80 Identities=11% Similarity=0.081 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHH
Q psy8368 205 RVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKE 284 (372)
Q Consensus 205 ~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~ 284 (372)
..+.+.+.++..+|+|..|..+... |. .+| .-+..+..+|...|++++|+..|++++.+++.+. .+..+
T Consensus 178 ~~Wk~v~~aCv~~~ef~lA~~~~l~-L~----~~a---d~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~---~~fte 246 (449)
T 1b89_A 178 RTWKEVCFACVDGKEFRLAQMCGLH-IV----VHA---DELEELINYYQDRGYFEELITMLEAALGLERAHM---GMFTE 246 (449)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHTTTT-TT----TCH---HHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCH---HHHHH
T ss_pred hhHHHHHHHHHHcCcHHHHHHHHHH-HH----hCH---hhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHH---HHHHH
Confidence 4444555555555555555443332 21 233 3344677889999999999999999999999999 99999
Q ss_pred HHHHHHHHHHH
Q psy8368 285 ILKADLGNQQY 295 (372)
Q Consensus 285 l~~~~~~~~~~ 295 (372)
|+.+..+.+-.
T Consensus 247 l~il~~ky~p~ 257 (449)
T 1b89_A 247 LAILYSKFKPQ 257 (449)
T ss_dssp HHHHHHTTCHH
T ss_pred HHHHHHhcCHH
Confidence 98887766433
No 251
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.73 E-value=0.00014 Score=66.94 Aligned_cols=98 Identities=7% Similarity=-0.122 Sum_probs=75.4
Q ss_pred hhHHHHhcc--CHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccC-
Q psy8368 161 SGKNAFNDK--NIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHF- 237 (372)
Q Consensus 161 ~Gn~~~~~g--~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~- 237 (372)
.|...+..| ++.+|...|+++....+.. . . ..++.| |++++|+|++|...++.+++..+..
T Consensus 182 ea~v~l~~g~~~~q~A~~~f~El~~~~p~~----~-~--------~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~ 245 (310)
T 3mv2_B 182 ESYIKFATNKETATSNFYYYEELSQTFPTW----K-T--------QLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVE 245 (310)
T ss_dssp HHHHHHHHTCSTTTHHHHHHHHHHTTSCSH----H-H--------HHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTT
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhCCCc----c-c--------HHHHHH---HHHHcCCHHHHHHHHHHHHHhccccc
Confidence 343355445 8999999999877654321 0 0 245555 9999999999999999777521111
Q ss_pred -----CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 238 -----ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 238 -----~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
+|+|+.++.++..+...+|+ +|.+++.++.+++|+++
T Consensus 246 ~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp 287 (310)
T 3mv2_B 246 QKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHA 287 (310)
T ss_dssp TCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCH
T ss_pred ccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCCh
Confidence 58999999999999999997 99999999999999999
No 252
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.69 E-value=0.00023 Score=64.38 Aligned_cols=68 Identities=12% Similarity=0.108 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHc-----cCHHHHHHHHHHHHHhhccCCCC-chhHHHHHHHHHHhc-CCHHHHHHHHHHHHhhcCCC
Q psy8368 204 CRVYRNLMVCYNNN-----KQYKLTCDCASKALQFASHFATK-DVKLFFVWGKALIGL-QEWTSAIKHLKTARKLAAKD 275 (372)
Q Consensus 204 ~~l~~Nla~~~~kl-----~~y~~Ai~~~~~aL~~~~~~~p~-~~ka~~r~a~a~~~l-~~~e~A~~~~~~al~l~p~~ 275 (372)
..+|.-+|..|.+. |+.++|..++++||+ ++|+ +..+++..|..+... +++++|...+++|+..+|..
T Consensus 199 GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~----LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 199 GAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTR----YCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHH----HCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred CHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHH----hCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 56899999999996 999999999999998 9997 599999999999885 99999999999999998874
No 253
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.68 E-value=0.00019 Score=69.52 Aligned_cols=84 Identities=7% Similarity=-0.055 Sum_probs=68.5
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..+..+.+.|..|..+|+|++|+.+|+++|.+....-.++.. .....++|+|..|..+|+|++|+..+++||+
T Consensus 338 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp-------~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 338 YMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSL-------NVASMWLKLGRLYMGLENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCH-------HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCCh-------HHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 457888899999999999999999999999987654333221 2267899999999999999999999999998
Q ss_pred hhc-cCCCCchh
Q psy8368 233 FAS-HFATKDVK 243 (372)
Q Consensus 233 ~~~-~~~p~~~k 243 (372)
+.. .+.|+++.
T Consensus 411 i~~~~lG~~Hp~ 422 (433)
T 3qww_A 411 IMEVAHGKDHPY 422 (433)
T ss_dssp HHHHHTCTTCHH
T ss_pred HHHHHcCCCChH
Confidence 764 35666553
No 254
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.61 E-value=0.00023 Score=68.78 Aligned_cols=96 Identities=5% Similarity=-0.099 Sum_probs=74.4
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..+..+.+.|..|..+|+|++|+..|+++|.+....-.++. ......++|+|..|..+|+|++|+..+.+|++
T Consensus 327 ~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~H-------p~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~ 399 (429)
T 3qwp_A 327 YQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSH-------PVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFD 399 (429)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSC-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCC-------hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 45778889999999999999999999999998755432222 12367899999999999999999999999998
Q ss_pred hhc-cCCCCch---hHHHHHHHHHHhc
Q psy8368 233 FAS-HFATKDV---KLFFVWGKALIGL 255 (372)
Q Consensus 233 ~~~-~~~p~~~---ka~~r~a~a~~~l 255 (372)
+.. .+.|+++ .++-+++.++..+
T Consensus 400 i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 400 IMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 764 3566643 3455566666543
No 255
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.53 E-value=0.00074 Score=62.07 Aligned_cols=125 Identities=6% Similarity=-0.098 Sum_probs=89.9
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhc
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFAS 235 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~ 235 (372)
..+...|..+...|++++|+..+.++|...+. ... ..++.-++.+|+++|+.+.|.+.+++..+
T Consensus 101 ~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~---~~~----------lea~~l~vqi~L~~~r~d~A~k~l~~~~~--- 164 (310)
T 3mv2_B 101 YELYLLATAQAILGDLDKSLETCVEGIDNDEA---EGT----------TELLLLAIEVALLNNNVSTASTIFDNYTN--- 164 (310)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCS---TTH----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhccCCC---cCc----------HHHHHHHHHHHHHCCCHHHHHHHHHHHHh---
Confidence 33467899999999999999999999765430 111 56788889999999999999999999886
Q ss_pred cCCCC----chhHHHHHHHH--HHhcC--CHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy8368 236 HFATK----DVKLFFVWGKA--LIGLQ--EWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKA 301 (372)
Q Consensus 236 ~~~p~----~~ka~~r~a~a--~~~l~--~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 301 (372)
.+|+ +-..+..++.+ .+..| ++.+|...|+.+....|+.. .....+. +...++++.++++.
T Consensus 165 -~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~---~~~lLln-~~~~~g~~~eAe~~ 233 (310)
T 3mv2_B 165 -AIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWK---TQLGLLN-LHLQQRNIAEAQGI 233 (310)
T ss_dssp -HSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHH---HHHHHHH-HHHHHTCHHHHHHH
T ss_pred -cCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcc---cHHHHHH-HHHHcCCHHHHHHH
Confidence 7773 33445555544 66556 99999999999888888633 2223333 55666666555443
No 256
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.47 E-value=0.0011 Score=49.50 Aligned_cols=67 Identities=10% Similarity=-0.047 Sum_probs=57.3
Q ss_pred HHHHHHhhHHHHhccC---HHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy8368 155 AQELGASGKNAFNDKN---IVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKAL 231 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~---~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL 231 (372)
+..+...|..++..++ ..+|...+.+|+...+.. ...+..+|..+++.|+|.+|+.++++++
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~---------------~rA~~~lg~~~~~~g~y~~Ai~~w~~~l 70 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYN---------------EAALSLIANDHFISFRFQEAIDTWVLLL 70 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4566677888865555 799999999999998776 6888899999999999999999999999
Q ss_pred HhhccCCCC
Q psy8368 232 QFASHFATK 240 (372)
Q Consensus 232 ~~~~~~~p~ 240 (372)
+ .+|.
T Consensus 71 ~----~~p~ 75 (93)
T 3bee_A 71 D----SNDP 75 (93)
T ss_dssp T----CCCT
T ss_pred h----hCCC
Confidence 7 6666
No 257
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.37 E-value=0.0006 Score=56.28 Aligned_cols=96 Identities=19% Similarity=0.100 Sum_probs=65.9
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCCh--------HHHH-H-HHHHHHHHHHHHHHHHHHccCHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNY--------EDQM-Q-LEEYLCRVYRNLMVCYNNNKQYKL 222 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~--------~~~~-~-~~~l~~~l~~Nla~~~~kl~~y~~ 222 (372)
..++.+.-.|+.+|.+++|..|...|++||+.....+.... .... . -...-..+.+.+|.||++++++.+
T Consensus 61 ~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~ 140 (167)
T 3ffl_A 61 QKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKD 140 (167)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHH
Confidence 45677888999999999999999999999988653211100 0000 0 000014688899999999999999
Q ss_pred HHHHHHHHHHhhccCCCCchhHHHHHHHHHH
Q psy8368 223 TCDCASKALQFASHFATKDVKLFFVWGKALI 253 (372)
Q Consensus 223 Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~ 253 (372)
|+...+.+- .....++...-+|+.|.
T Consensus 141 Ai~~Le~Ip-----~k~Rt~kvnm~LakLy~ 166 (167)
T 3ffl_A 141 AIAILDGIP-----SRQRTPKINMLLANLYK 166 (167)
T ss_dssp HHHHHHTSC-----GGGCCHHHHHHHHHHCC
T ss_pred HHHHHhcCC-----chhcCHHHHHHHHHHhc
Confidence 999877543 23457777777777653
No 258
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.22 E-value=0.0074 Score=57.34 Aligned_cols=111 Identities=9% Similarity=-0.120 Sum_probs=91.8
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhcc------CCC-hHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHH
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQ------VTN-YEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCAS 228 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~------~~~-~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~ 228 (372)
..+...|......|+...|...+.+|+.++.... ..| ......+.+++..+...++.+++.+|++.+|+..+.
T Consensus 116 ~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~ 195 (388)
T 2ff4_A 116 VAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELE 195 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 3444555666678899999999999999874432 122 234567778888899999999999999999999999
Q ss_pred HHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy8368 229 KALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARK 270 (372)
Q Consensus 229 ~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~ 270 (372)
.++. .+|-+-.++..+-.||...|+..+|+..|+++.+
T Consensus 196 ~~~~----~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 196 ALTF----EHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHH----HSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHH----hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9997 9999999999999999999999999999998754
No 259
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.15 E-value=0.0008 Score=64.82 Aligned_cols=115 Identities=13% Similarity=0.095 Sum_probs=73.5
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhc
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFAS 235 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~ 235 (372)
..+...|+.++..|.|++|...|.++ ..+.++|.|+.++|+|++|+..+.++.
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a-----------------------~n~~~LA~~L~~Lg~yq~AVea~~KA~---- 175 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV-----------------------SNFGRLASTLVHLGEYQAAVDGARKAN---- 175 (449)
T ss_dssp --------------CTTTHHHHHHHT-----------------------TCHHHHHHHHHTTTCHHHHHHHHHHHT----
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh-----------------------hhHHHHHHHHHHhccHHHHHHHHHHcC----
Confidence 38889999999999999999999865 247789999999999999999999882
Q ss_pred cCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q psy8368 236 HFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSSS 310 (372)
Q Consensus 236 ~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (372)
+++.|-....++..+|+|+.|..+... +.++|++. ..+..+..+.+...+ ....+.+.++..
T Consensus 176 -----~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~l------~~lv~~Yek~G~~eE-ai~lLe~aL~le 237 (449)
T 1b89_A 176 -----STRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADEL------EELINYYQDRGYFEE-LITMLEAALGLE 237 (449)
T ss_dssp -----CHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHHH------HHHHHHHHHTTCHHH-HHHHHHHHTTST
T ss_pred -----CchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhhH------HHHHHHHHHCCCHHH-HHHHHHHHhCCc
Confidence 578899999999999999999777764 33555443 235455555554433 234444444433
No 260
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.86 E-value=0.006 Score=48.01 Aligned_cols=78 Identities=9% Similarity=-0.134 Sum_probs=53.2
Q ss_pred HHHHHhhHHHHhccCHHH---HHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 156 QELGASGKNAFNDKNIVS---AVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~---A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
...++.|..+.+..+... ++..+...+..- .+ .....+++.+|..++++|+|.+|+.+|+..|+
T Consensus 36 ~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~------~p-------~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~ 102 (126)
T 1nzn_A 36 STQFEYAWCLVRTRYNDDIRKGIVLLEELLPKG------SK-------EEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQ 102 (126)
T ss_dssp HHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTS------CH-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC------Cc-------chHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 445556666665554444 444444433321 00 12367899999999999999999999999998
Q ss_pred hhccCCCCchhHHHHHHH
Q psy8368 233 FASHFATKDVKLFFVWGK 250 (372)
Q Consensus 233 ~~~~~~p~~~ka~~r~a~ 250 (372)
.+|+|..|.--+..
T Consensus 103 ----~eP~n~QA~~Lk~~ 116 (126)
T 1nzn_A 103 ----TEPQNNQAKELERL 116 (126)
T ss_dssp ----HCTTCHHHHHHHHH
T ss_pred ----hCCCCHHHHHHHHH
Confidence 99999887654433
No 261
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.55 E-value=0.029 Score=44.36 Aligned_cols=79 Identities=8% Similarity=-0.049 Sum_probs=55.4
Q ss_pred HHHHHHhhHHHHhccC---HHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy8368 155 AQELGASGKNAFNDKN---IVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKAL 231 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~---~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL 231 (372)
....++.|..+.+..+ ...++..+...++.-+. .+..|++-+|..++++|+|.+|+.+|+.+|
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~--------------~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL 105 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAES--------------RRRECLYYLTIGCYKLGEYSMAKRYVDTLF 105 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGG--------------GHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcc--------------hhHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3455666666665544 33455555554443211 126789999999999999999999999999
Q ss_pred HhhccCCCCchhHHHHHHHH
Q psy8368 232 QFASHFATKDVKLFFVWGKA 251 (372)
Q Consensus 232 ~~~~~~~p~~~ka~~r~a~a 251 (372)
+ .+|+|..|.--+..+
T Consensus 106 ~----~eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 106 E----HERNNKQVGALKSMV 121 (134)
T ss_dssp T----TCTTCHHHHHHHHHH
T ss_pred h----hCCCCHHHHHHHHHH
Confidence 8 999998876554433
No 262
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=96.53 E-value=0.031 Score=53.05 Aligned_cols=103 Identities=12% Similarity=-0.032 Sum_probs=84.1
Q ss_pred HhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccC-C
Q psy8368 160 ASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHF-A 238 (372)
Q Consensus 160 ~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~-~ 238 (372)
..|..|+..|+|.+|+..+.+.++.+.... + ..+...++......|..++++.++...+++|......+ .
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~d---d------~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~ 174 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLD---D------KNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYC 174 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSS---C------THHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccc---c------chhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCC
Confidence 578999999999999999999999886531 1 24557889999999999999999999999999876665 2
Q ss_pred CCchhH--HHHHHHHHH-hcCCHHHHHHHHHHHHhh
Q psy8368 239 TKDVKL--FFVWGKALI-GLQEWTSAIKHLKTARKL 271 (372)
Q Consensus 239 p~~~ka--~~r~a~a~~-~l~~~e~A~~~~~~al~l 271 (372)
|....| ..--|..|+ ..++|..|..+|-.+++-
T Consensus 175 ~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 175 PPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 333344 445689999 899999999999999753
No 263
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.50 E-value=0.028 Score=45.02 Aligned_cols=77 Identities=8% Similarity=-0.019 Sum_probs=54.2
Q ss_pred HHHHHHhhHHHHhccCH---HHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy8368 155 AQELGASGKNAFNDKNI---VSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKAL 231 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~---~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL 231 (372)
....++.+..+.+..+- ..++..+...++.-+. .+..|++.+|..++++|+|.+|+.+|+..|
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~--------------~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL 104 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAES--------------RRRECLYYLTIGCYKLGEYSMAKRYVDTLF 104 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCS--------------THHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcc--------------chhHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 34556666666665543 3455555554442111 125789999999999999999999999999
Q ss_pred HhhccCCCCchhHHHHHH
Q psy8368 232 QFASHFATKDVKLFFVWG 249 (372)
Q Consensus 232 ~~~~~~~p~~~ka~~r~a 249 (372)
+ .+|+|..|.--+.
T Consensus 105 ~----~eP~n~QA~~Lk~ 118 (144)
T 1y8m_A 105 E----HERNNKQVGALKS 118 (144)
T ss_dssp H----TCCCCHHHHHHHH
T ss_pred h----cCCCcHHHHHHHH
Confidence 8 9999988765443
No 264
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.44 E-value=0.1 Score=53.28 Aligned_cols=144 Identities=13% Similarity=0.025 Sum_probs=92.0
Q ss_pred HhhHHHHhccCHHHHHHHHHHHHHhhhhcc------CC-ChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 160 ASGKNAFNDKNIVSAVRRYRDAVKLLINTQ------VT-NYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 160 ~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~------~~-~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..+......|+++.|...|.+++..++... .+ +++....+..-...++...+.+..+.+..+.|...+.+|++
T Consensus 383 ~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~ 462 (679)
T 4e6h_A 383 SLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRR 462 (679)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344444556777777777777776542100 01 11111111222234677777778888999999999999997
Q ss_pred hhccC-CCCchhHHHHHHHHHHhcC-CHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q psy8368 233 FASHF-ATKDVKLFFVWGKALIGLQ-EWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQYQKETKARCMKMFSSS 310 (372)
Q Consensus 233 ~~~~~-~p~~~ka~~r~a~a~~~l~-~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (372)
. .+...+.|...|..-...+ +++.|...|+++++..|++. .++..+.......++ ....|..|.+.+...
T Consensus 463 ----~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~---~~w~~y~~fe~~~~~-~~~AR~lferal~~~ 534 (679)
T 4e6h_A 463 ----LKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDG---EYINKYLDFLIYVNE-ESQVKSLFESSIDKI 534 (679)
T ss_dssp ----TGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHHTC-HHHHHHHHHHHTTTS
T ss_pred ----hcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCch---HHHHHHHHHHHhCCC-HHHHHHHHHHHHHhc
Confidence 3 3345677777777766665 48999999999999999998 776555555444332 345566677666554
Q ss_pred C
Q psy8368 311 S 311 (372)
Q Consensus 311 ~ 311 (372)
.
T Consensus 535 ~ 535 (679)
T 4e6h_A 535 S 535 (679)
T ss_dssp S
T ss_pred C
Confidence 4
No 265
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=96.32 E-value=0.0085 Score=54.21 Aligned_cols=66 Identities=8% Similarity=-0.038 Sum_probs=57.5
Q ss_pred CHHHHHHHHHHHHHhhccCCCC--chhHHHHHHHHHHhc-----CCHHHHHHHHHHHHhhcCCC-ccHHHHHHHHHHHHH
Q psy8368 219 QYKLTCDCASKALQFASHFATK--DVKLFFVWGKALIGL-----QEWTSAIKHLKTARKLAAKD-SVRAEIDKEILKADL 290 (372)
Q Consensus 219 ~y~~Ai~~~~~aL~~~~~~~p~--~~ka~~r~a~a~~~l-----~~~e~A~~~~~~al~l~p~~-~~~~~~~~~l~~~~~ 290 (372)
....|....++|++ +||+ +..||.-+|..|..+ |+.+.|..+|++|++++|+. . .++..++....
T Consensus 178 ~l~~A~a~lerAle----LDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~i---d~~v~YA~~l~ 250 (301)
T 3u64_A 178 TVHAAVMMLERACD----LWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDP---DHHITYADALC 250 (301)
T ss_dssp HHHHHHHHHHHHHH----HCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCS---HHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHH----hCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCc---hHHHHHHHHHH
Confidence 47899999999998 9999 677999999999996 99999999999999999975 7 77777776554
Q ss_pred H
Q psy8368 291 G 291 (372)
Q Consensus 291 ~ 291 (372)
.
T Consensus 251 ~ 251 (301)
T 3u64_A 251 I 251 (301)
T ss_dssp T
T ss_pred H
Confidence 4
No 266
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.23 E-value=0.022 Score=58.10 Aligned_cols=134 Identities=9% Similarity=-0.021 Sum_probs=93.7
Q ss_pred HHHHHhhHHHHhccCHHHHH-HHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 156 QELGASGKNAFNDKNIVSAV-RRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~-~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
..+...+..+...|+...|. ..|.+|+..+|.. ..++...+....+.|++++|...+++++...
T Consensus 344 ~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s---------------~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l 408 (679)
T 4e6h_A 344 EIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNS---------------AVLAFSLSEQYELNTKIPEIETTILSCIDRI 408 (679)
T ss_dssp HHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 34556677777788888897 9999999887765 5788899999999999999999999999732
Q ss_pred c-------cCCCC-----------chhHHHHHHHHHHhcCCHHHHHHHHHHHHhh-cCCCccHHHHHHHHHHHHHHHHHH
Q psy8368 235 S-------HFATK-----------DVKLFFVWGKALIGLQEWTSAIKHLKTARKL-AAKDSVRAEIDKEILKADLGNQQY 295 (372)
Q Consensus 235 ~-------~~~p~-----------~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l-~p~~~~~~~~~~~l~~~~~~~~~~ 295 (372)
. .-.|. ...+|...+......++.+.|...|.+|++. .+... .+....+.+.......
T Consensus 409 ~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~---~lyi~~A~lE~~~~~d 485 (679)
T 4e6h_A 409 HLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTP---DIYLENAYIEYHISKD 485 (679)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCT---HHHHHHHHHHHTTTSC
T ss_pred HHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCh---HHHHHHHHHHHHhCCC
Confidence 0 00142 4567888888888899999999999999988 43444 4444434343333221
Q ss_pred HHHHHHHHHhhc
Q psy8368 296 QKETKARCMKMF 307 (372)
Q Consensus 296 ~~~~~~~~~~~~ 307 (372)
.+..++.|...+
T Consensus 486 ~e~Ar~ife~~L 497 (679)
T 4e6h_A 486 TKTACKVLELGL 497 (679)
T ss_dssp CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 233444444433
No 267
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.03 E-value=0.05 Score=55.86 Aligned_cols=60 Identities=12% Similarity=0.205 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy8368 206 VYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTAR 269 (372)
Q Consensus 206 l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al 269 (372)
++.-.|.-++..|+|+-|+..+++|+. +-|.....|++++.||..+|+|+.|+-.++-+-
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~----~aPseF~tW~~La~vYi~l~d~e~ALLtLNScP 398 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTE----LALDSFESWYNLARCHIKKEEYEKALFAINSMP 398 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH----HCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHh----cCchhhHHHHHHHHHHHHhccHHHHHHHHhcCC
Confidence 445556677789999999999999998 889999999999999999999999998888773
No 268
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=95.65 E-value=0.23 Score=45.26 Aligned_cols=119 Identities=9% Similarity=0.054 Sum_probs=79.7
Q ss_pred HHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCH-------HHHHHHHHH
Q psy8368 157 ELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQY-------KLTCDCASK 229 (372)
Q Consensus 157 ~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y-------~~Ai~~~~~ 229 (372)
.....|-.++..|+|.+|+..|+..|..++-....+.++..+++++...|..-+-.+-+.+.+- +.....++-
T Consensus 104 ~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lEL 183 (320)
T 3mkr_B 104 QRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEM 183 (320)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHH
Confidence 3457899999999999999999999999877655666677788887776655444444444221 222222222
Q ss_pred HHHhhc--cCCCCchhHHHHHHHH-HHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 230 ALQFAS--HFATKDVKLFFVWGKA-LIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 230 aL~~~~--~~~p~~~ka~~r~a~a-~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
+. ++. .++|.+.-.-+|.|.. .++.++|..|...-++.|++.|+..
T Consensus 184 AA-YFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~ 232 (320)
T 3mkr_B 184 AA-YFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPE 232 (320)
T ss_dssp HH-HHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHH
T ss_pred HH-HhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHH
Confidence 21 111 1455544444455544 5789999999999999999988654
No 269
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=95.56 E-value=0.27 Score=44.78 Aligned_cols=119 Identities=11% Similarity=0.041 Sum_probs=77.7
Q ss_pred HHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh---h
Q psy8368 158 LGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF---A 234 (372)
Q Consensus 158 ~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~---~ 234 (372)
....|-.++..|+|.+|+..|+..|..++-....+.++..+++++...|..-+-.+-+.+.+-.-.-..-.+.+++ +
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAYF 196 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAYF 196 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHh
Confidence 4558999999999999999999999988776555666677777777666544444444442211000111222221 1
Q ss_pred c--cCCCCchhHHHHHHH-HHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 235 S--HFATKDVKLFFVWGK-ALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 235 ~--~~~p~~~ka~~r~a~-a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
. .++|.+.-.-+|.|. ..++.++|..|....++.|++.|+..
T Consensus 197 T~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~ 241 (325)
T 3mv2_A 197 TKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGP 241 (325)
T ss_dssp GGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSH
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHH
Confidence 1 144544444444444 45789999999999999999999765
No 270
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.17 E-value=0.32 Score=40.14 Aligned_cols=70 Identities=17% Similarity=0.138 Sum_probs=54.7
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHH--hhc-----------cCCCCchhHHH-HHHHHHHhcCCHHHHHHHHHHHHhhc
Q psy8368 207 YRNLMVCYNNNKQYKLTCDCASKALQ--FAS-----------HFATKDVKLFF-VWGKALIGLQEWTSAIKHLKTARKLA 272 (372)
Q Consensus 207 ~~Nla~~~~kl~~y~~Ai~~~~~aL~--~~~-----------~~~p~~~ka~~-r~a~a~~~l~~~e~A~~~~~~al~l~ 272 (372)
.+--+.||.++++|..|+...+..|. +.+ .+||.+-.-++ -+|..+..+|+-++|+.+|......+
T Consensus 65 ~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~ 144 (242)
T 3kae_A 65 KYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKS 144 (242)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCc
Confidence 33468999999999999999999993 110 02344444444 46999999999999999999999999
Q ss_pred CCCc
Q psy8368 273 AKDS 276 (372)
Q Consensus 273 p~~~ 276 (372)
|-..
T Consensus 145 ~lf~ 148 (242)
T 3kae_A 145 FLFS 148 (242)
T ss_dssp CCHH
T ss_pred cccc
Confidence 8766
No 271
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=95.13 E-value=0.52 Score=38.09 Aligned_cols=93 Identities=13% Similarity=0.049 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHH
Q psy8368 172 VSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKA 251 (372)
Q Consensus 172 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a 251 (372)
..-...|.+|+..+|.... ..-+-.+-++.+.|.. ..+++.++|...|+.+++ +....+|.|...|+-
T Consensus 36 ~rlrd~YerAia~~Pp~k~-------~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~----~hKkFAKiwi~~AqF 103 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKY-------GQNESFARIQVRFAEL-KAIQEPDDARDYFQMARA----NCKKFAFVHISFAQF 103 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGG-------TTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHH----HCTTBHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcccc-------ccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHH----HhHHHHHHHHHHHHH
Confidence 6777899999998765421 1112335677777754 677999999999999998 455567777777887
Q ss_pred HHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 252 LIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 252 ~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
-...|+...|...+.+|+.+.|...
T Consensus 104 EiRqgnl~kARkILg~AiG~~~k~~ 128 (161)
T 4h7y_A 104 ELSQGNVKKSKQLLQKAVERGAVPL 128 (161)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTCBCH
T ss_pred HHHcccHHHHHHHHHHHhccCCCcH
Confidence 8889999999999999999999876
No 272
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.95 E-value=0.12 Score=49.56 Aligned_cols=105 Identities=9% Similarity=-0.064 Sum_probs=81.1
Q ss_pred HHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhcc
Q psy8368 157 ELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASH 236 (372)
Q Consensus 157 ~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~ 236 (372)
.+...|..+++.|++..|+..|.++...+.... ....++.++..+++..++|..+..++.++......
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~------------~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~ 200 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTG------------AKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEK 200 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCC------------SHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChH------------HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhc
Confidence 356799999999999999999999888764321 12577888888999999999999999999765433
Q ss_pred CCCCchh--HHHHHHHHHHhcCCHHHHHHHHHHHHhhcC
Q psy8368 237 FATKDVK--LFFVWGKALIGLQEWTSAIKHLKTARKLAA 273 (372)
Q Consensus 237 ~~p~~~k--a~~r~a~a~~~l~~~e~A~~~~~~al~l~p 273 (372)
......+ .....|.+++..++|..|-..|..++.-..
T Consensus 201 ~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 201 GGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp CCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred CCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhccCC
Confidence 3222333 344567888899999999999998876543
No 273
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=94.43 E-value=3.4 Score=38.95 Aligned_cols=154 Identities=12% Similarity=0.052 Sum_probs=99.7
Q ss_pred HHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhh-------------------hhccCCChHHH---------HH---HH
Q psy8368 152 LKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLL-------------------INTQVTNYEDQ---------MQ---LE 200 (372)
Q Consensus 152 ~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~-------------------~~~~~~~~~~~---------~~---~~ 200 (372)
..+=....+.|..|.+.|++++-.........++ ...+...+..- .. ..
T Consensus 16 ~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~ 95 (394)
T 3txn_A 16 RIKEQGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRT 95 (394)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3445677889999999999998888776544333 22221111110 00 00
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCC--chhHHHHHHHHHHhcCCHHHHHHHHHHHHhhc---CCC
Q psy8368 201 EYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATK--DVKLFFVWGKALIGLQEWTSAIKHLKTARKLA---AKD 275 (372)
Q Consensus 201 ~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~--~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~---p~~ 275 (372)
=++..+-.++|..|+..|+|.+|+..+.+.++.+...|.. -...+....+.|..++++..+...|.+|.... +.+
T Consensus 96 flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~ 175 (394)
T 3txn_A 96 FLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCP 175 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCC
Confidence 1223355589999999999999999999999876665543 45567888999999999999999999998765 244
Q ss_pred c-cHHHHHHHHHHHHH-HHHHHHHHHHHHHHh
Q psy8368 276 S-VRAEIDKEILKADL-GNQQYQKETKARCMK 305 (372)
Q Consensus 276 ~-~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~ 305 (372)
+ ..+.+...-+.+.. ..++++.+....+..
T Consensus 176 p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~ea 207 (394)
T 3txn_A 176 PKVQGALDLQSGILHAADERDFKTAFSYFYEA 207 (394)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHhccCHHHHHHHHHHH
Confidence 4 22233333333334 445556555555443
No 274
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.72 E-value=0.41 Score=46.75 Aligned_cols=81 Identities=9% Similarity=-0.106 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDK 283 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~ 283 (372)
..++.++|-...-...+..|..+|.+|+. +.|++..+|..+|..+...|+.-+|+-+|-+++......+ .++.
T Consensus 152 hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~----~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~---~a~~ 224 (497)
T 1ya0_A 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQ----LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFP---AAST 224 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCH---HHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHH----hCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCCh---hHHH
Confidence 34666677776667789999999999998 9999999999999999999999999999999999877777 7777
Q ss_pred HHHHHHHH
Q psy8368 284 EILKADLG 291 (372)
Q Consensus 284 ~l~~~~~~ 291 (372)
.|..+...
T Consensus 225 nL~~~f~~ 232 (497)
T 1ya0_A 225 NLQKALSK 232 (497)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766554
No 275
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=93.57 E-value=0.34 Score=45.34 Aligned_cols=70 Identities=10% Similarity=0.059 Sum_probs=56.6
Q ss_pred HHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCC
Q psy8368 159 GASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFA 238 (372)
Q Consensus 159 k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~ 238 (372)
...+..++..|+++.|+..+++|+.+.+. ...|.-+|.++.-.|++++|+..+.+|++ ++
T Consensus 281 ~alal~~l~~gd~d~A~~~l~rAl~Ln~s----------------~~a~~llG~~~~~~G~~~eA~e~~~~Alr----L~ 340 (372)
T 3ly7_A 281 QIKAVSALVKGKTDESYQAINTGIDLEMS----------------WLNYVLLGKVYEMKGMNREAADAYLTAFN----LR 340 (372)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCCC----------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HS
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhcCCC----------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHh----cC
Confidence 34566677789999999999999998522 35667889999999999999999999998 89
Q ss_pred CCchhHHHHHH
Q psy8368 239 TKDVKLFFVWG 249 (372)
Q Consensus 239 p~~~ka~~r~a 249 (372)
|... .|+...
T Consensus 341 P~~~-t~~~~~ 350 (372)
T 3ly7_A 341 PGAN-TLYWIE 350 (372)
T ss_dssp CSHH-HHHHHH
T ss_pred CCcC-hHHHHh
Confidence 9764 444433
No 276
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.21 E-value=0.48 Score=42.12 Aligned_cols=61 Identities=16% Similarity=0.036 Sum_probs=57.3
Q ss_pred HHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 212 VCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 212 ~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
...++.++.++|+..+...++ .+|.|++....+.+.+.-.|+++.|..-++.+.+++|...
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR----~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~ 65 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIK----ASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYL 65 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHH----TCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHhCCCHHHHHHHHHHHHH----hCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhh
Confidence 346778999999999999998 9999999999999999999999999999999999999887
No 277
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=93.19 E-value=1.7 Score=42.32 Aligned_cols=124 Identities=6% Similarity=-0.093 Sum_probs=83.7
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCC---------hHHHHHH----------------HHHHHHHHHHH
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTN---------YEDQMQL----------------EEYLCRVYRNL 210 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~---------~~~~~~~----------------~~l~~~l~~Nl 210 (372)
..+...+..+...|+.+.|...|.+|+.. |.....+ ...-..+ ......++.+.
T Consensus 214 ~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y 292 (493)
T 2uy1_A 214 EVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINH 292 (493)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHH
Confidence 34666777788899999999999999998 5532110 0000000 01112456677
Q ss_pred HHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcC-CHHHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Q psy8368 211 MVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQ-EWTSAIKHLKTARKLAAKDSVRAEIDKEILKA 288 (372)
Q Consensus 211 a~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~-~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~ 288 (372)
+....+.+..+.|...+.+| + ..+.....|...|..-...+ +++.|...|+++++..|+++ .........
T Consensus 293 ~~~~~r~~~~~~AR~i~~~A-~----~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~---~~~~~yid~ 363 (493)
T 2uy1_A 293 LNYVLKKRGLELFRKLFIEL-G----NEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDST---LLKEEFFLF 363 (493)
T ss_dssp HHHHHHHHCHHHHHHHHHHH-T----TSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCH---HHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHh-h----CCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCH---HHHHHHHHH
Confidence 77777788999999999999 5 33335556666666555555 69999999999999999887 654444443
No 278
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=92.25 E-value=2.3 Score=41.40 Aligned_cols=104 Identities=10% Similarity=0.067 Sum_probs=79.6
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhc
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFAS 235 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~ 235 (372)
..+...-+.+.+.|+++.|...|.+....- -.++ ...|+.+-.+|.+.|++++|...++...+.
T Consensus 106 ~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g---~~Pd-----------~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~-- 169 (501)
T 4g26_A 106 ATFTNGARLAVAKDDPEMAFDMVKQMKAFG---IQPR-----------LRSYGPALFGFCRKGDADKAYEVDAHMVES-- 169 (501)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHTT---CCCC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHcC---CCCc-----------cceehHHHHHHHHCCCHHHHHHHHHHHHhc--
Confidence 345566678889999999999998876531 1111 467888888999999999999999988761
Q ss_pred cCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhh--cCCCc
Q psy8368 236 HFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKL--AAKDS 276 (372)
Q Consensus 236 ~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l--~p~~~ 276 (372)
-+.| +...|.-+-.+|...|++++|.+.|++.... .|+..
T Consensus 170 G~~P-d~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps~~ 211 (501)
T 4g26_A 170 EVVP-EEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSKS 211 (501)
T ss_dssp TCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBCHH
T ss_pred CCCC-CHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcCHH
Confidence 1223 6668888999999999999999999988764 56544
No 279
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=91.39 E-value=0.5 Score=48.51 Aligned_cols=59 Identities=14% Similarity=0.160 Sum_probs=50.9
Q ss_pred HHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy8368 157 ELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKA 230 (372)
Q Consensus 157 ~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~a 230 (372)
-+...+..+..+|+|+.|+..-++|+...|.. -.++..||.||+++|+|+.|+-..+-+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPse---------------F~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDS---------------FESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchh---------------hHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 45566788889999999999999999997665 689999999999999999999776644
No 280
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=90.85 E-value=2.2 Score=41.49 Aligned_cols=113 Identities=5% Similarity=-0.110 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHH--
Q psy8368 173 SAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGK-- 250 (372)
Q Consensus 173 ~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~-- 250 (372)
.....|++|+..++.. ..++.+.+..+...|+.++|...+.+|+. . |.+...++..+.
T Consensus 197 Rv~~~ye~al~~~p~~---------------~~lW~~ya~~~~~~~~~~~ar~i~erAi~----~-P~~~~l~~~y~~~~ 256 (493)
T 2uy1_A 197 RMHFIHNYILDSFYYA---------------EEVYFFYSEYLIGIGQKEKAKKVVERGIE----M-SDGMFLSLYYGLVM 256 (493)
T ss_dssp HHHHHHHHHHHHTTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----H-CCSSHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHh----C-CCcHHHHHHHHhhc
Confidence 3455677777665544 57888999999999999999999999998 4 766543333222
Q ss_pred --------------------------------------HHHhcCCHHHHHHHHHHHHhhcCC-CccHHHHHHHHHHHHHH
Q psy8368 251 --------------------------------------ALIGLQEWTSAIKHLKTARKLAAK-DSVRAEIDKEILKADLG 291 (372)
Q Consensus 251 --------------------------------------a~~~l~~~e~A~~~~~~al~l~p~-~~~~~~~~~~l~~~~~~ 291 (372)
.....++.+.|...|.+| + .|. .. .+.-..+.+...
T Consensus 257 e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~-~~~~~~---~v~i~~A~lE~~ 331 (493)
T 2uy1_A 257 DEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-G-NEGVGP---HVFIYCAFIEYY 331 (493)
T ss_dssp TCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-T-TSCCCH---HHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-h-CCCCCh---HHHHHHHHHHHH
Confidence 222356678888888888 3 343 22 333333333333
Q ss_pred HHHHHHHHHHHHHhhccCC
Q psy8368 292 NQQYQKETKARCMKMFSSS 310 (372)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~ 310 (372)
.....+..+..|...+...
T Consensus 332 ~~~d~~~ar~ife~al~~~ 350 (493)
T 2uy1_A 332 ATGSRATPYNIFSSGLLKH 350 (493)
T ss_dssp HHCCSHHHHHHHHHHHHHC
T ss_pred HCCChHHHHHHHHHHHHHC
Confidence 3322344556666554433
No 281
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=90.23 E-value=0.36 Score=34.80 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhh
Q psy8368 151 VLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLIN 187 (372)
Q Consensus 151 ~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~ 187 (372)
.++.+..+-.+|...=+.|+|.+|+.+|..|++++..
T Consensus 15 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 51 (83)
T 2w2u_A 15 LEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQ 51 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 6788999999999999999999999999999998744
No 282
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=88.87 E-value=2.7 Score=42.81 Aligned_cols=26 Identities=19% Similarity=0.279 Sum_probs=23.2
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHH
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDA 181 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~a 181 (372)
..++..|..+.+.++++.|..+|.++
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 46788999999999999999999886
No 283
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=88.81 E-value=5.3 Score=35.41 Aligned_cols=63 Identities=10% Similarity=0.126 Sum_probs=52.0
Q ss_pred hHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCc
Q psy8368 162 GKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKD 241 (372)
Q Consensus 162 Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~ 241 (372)
.+.+++.|....|+......++..|.+ ..+...+-..+.-.|+|++|...++.+.+ ++|..
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~d---------------a~~R~~LfqLLcv~G~w~RA~~QL~~~a~----l~p~~ 64 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPKD---------------ASLRSSFIELLCIDGDFERADEQLMQSIK----LFPEY 64 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HCGGG
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCcC---------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHH----hCchh
Confidence 457889999999999999999986654 56666677777778999999999999997 88875
Q ss_pred hh
Q psy8368 242 VK 243 (372)
Q Consensus 242 ~k 243 (372)
..
T Consensus 65 ~~ 66 (273)
T 1zbp_A 65 LP 66 (273)
T ss_dssp HH
T ss_pred hH
Confidence 54
No 284
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=88.42 E-value=6.2 Score=37.72 Aligned_cols=110 Identities=12% Similarity=-0.047 Sum_probs=79.4
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
+++.-....++.++..|+|.+|.........-.... .+ ...++.++.-....|+..++|.+|...++++..
T Consensus 135 erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~---~~------~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~ 205 (445)
T 4b4t_P 135 ERARVTKDLVEIKKEEGKIDEAADILCELQVETYGS---ME------MSEKIQFILEQMELSILKGDYSQATVLSRKILK 205 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSS---SC------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhc---cc------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 355556778999999999999999988776432211 11 123366777788889999999999999998753
Q ss_pred -hhccCCCCchhHH--HHHHHHHHhcCCHHHHHHHHHHHHhh
Q psy8368 233 -FASHFATKDVKLF--FVWGKALIGLQEWTSAIKHLKTARKL 271 (372)
Q Consensus 233 -~~~~~~p~~~ka~--~r~a~a~~~l~~~e~A~~~~~~al~l 271 (372)
......+...++. .-.|..|...++|.+|-.+|..++..
T Consensus 206 ~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 206 KTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred hhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 2222333444444 45688889999999999999988764
No 285
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=87.85 E-value=3.7 Score=30.03 Aligned_cols=38 Identities=11% Similarity=0.120 Sum_probs=33.5
Q ss_pred HHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhc
Q psy8368 151 VLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINT 188 (372)
Q Consensus 151 ~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~ 188 (372)
.++.+..+...|...=..|+|.+|+.+|..|+.++-..
T Consensus 11 ~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~a 48 (93)
T 1wfd_A 11 DSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQV 48 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 46788888999999999999999999999999987553
No 286
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=87.61 E-value=3.5 Score=29.70 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=29.6
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhh
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLIN 187 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~ 187 (372)
..+..+...|..+=..|+|.+|+.+|..|++++-.
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~ 48 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQ 48 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 45667777888888999999999999999998754
No 287
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=87.48 E-value=3.6 Score=31.55 Aligned_cols=38 Identities=21% Similarity=0.339 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhc
Q psy8368 151 VLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINT 188 (372)
Q Consensus 151 ~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~ 188 (372)
.+..+..+...|...=..|+|.+|+.+|..|+.++-..
T Consensus 14 ~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~a 51 (117)
T 2cpt_A 14 NLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHV 51 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHH
Confidence 46788888889988889999999999999999987543
No 288
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.81 E-value=6.3 Score=30.04 Aligned_cols=77 Identities=10% Similarity=0.003 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhc---c----CCChHHHHHHHHHHHHHHHHHHHHHHHccC
Q psy8368 147 AFAKVLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINT---Q----VTNYEDQMQLEEYLCRVYRNLMVCYNNNKQ 219 (372)
Q Consensus 147 ~~~~~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~---~----~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~ 219 (372)
.+....+.+-.+.+.|-..=..|+-..|+.+|+++|..+... + ....+.+...+.++.....|+..+-.+++.
T Consensus 14 ~ik~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~RL~~ 93 (116)
T 2dl1_A 14 IIREAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEI 93 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566778888888888888899999999999999887542 1 234567888888999999999999888775
Q ss_pred HHHH
Q psy8368 220 YKLT 223 (372)
Q Consensus 220 y~~A 223 (372)
....
T Consensus 94 Le~~ 97 (116)
T 2dl1_A 94 LEKG 97 (116)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 5443
No 289
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=86.29 E-value=3.2 Score=29.71 Aligned_cols=37 Identities=16% Similarity=0.261 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhh
Q psy8368 151 VLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLIN 187 (372)
Q Consensus 151 ~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~ 187 (372)
.++.+..+..+|...=+.|+|.+|+.+|..|++++-.
T Consensus 7 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 43 (83)
T 2v6y_A 7 LEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQ 43 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 4678888999999999999999999999999998744
No 290
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=85.28 E-value=9.3 Score=37.07 Aligned_cols=70 Identities=6% Similarity=-0.062 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhh--cCCCc
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKL--AAKDS 276 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l--~p~~~ 276 (372)
...|+.+-.+|.+.|++++|+..+++..+. -+.| +...|.-+-.+|...|++++|.+.|....+. .|+..
T Consensus 105 ~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~--g~~P-d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ 176 (501)
T 4g26_A 105 EATFTNGARLAVAKDDPEMAFDMVKQMKAF--GIQP-RLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEP 176 (501)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHc--CCCC-ccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHH
Confidence 467888999999999999999999988761 1223 6778888999999999999999999998764 56554
No 291
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=84.13 E-value=3.1 Score=44.95 Aligned_cols=109 Identities=14% Similarity=0.055 Sum_probs=74.9
Q ss_pred HHhhHHHHhccCHHHHHHHHHHHHHhhhhccC-CCh-HHHHHH------HHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy8368 159 GASGKNAFNDKNIVSAVRRYRDAVKLLINTQV-TNY-EDQMQL------EEYLCRVYRNLMVCYNNNKQYKLTCDCASKA 230 (372)
Q Consensus 159 k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~-~~~-~~~~~~------~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~a 230 (372)
+-.|..++..|++++|..+|.+|-.-+..... ... .....+ .......|+.+...+-+.+.++.++..+..|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 67899999999999999999987543322111 110 010000 0112456788888888999999999999999
Q ss_pred HHhhccCCCCchh--HHHHHHHHHHhcCCHHHHHHHHHHH
Q psy8368 231 LQFASHFATKDVK--LFFVWGKALIGLQEWTSAIKHLKTA 268 (372)
Q Consensus 231 L~~~~~~~p~~~k--a~~r~a~a~~~l~~~e~A~~~~~~a 268 (372)
|+....- +.+.+ .|.++-+++..+++|++|...+...
T Consensus 926 i~~~~~~-~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~ 964 (1139)
T 4fhn_B 926 DASKETD-DEDLSIAITHETLKTACAAGKFDAAHVALMVL 964 (1139)
T ss_dssp HHHCCSC-CHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHH
T ss_pred HHhccCC-ChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhC
Confidence 9833211 12222 5788999999999999998777543
No 292
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=83.42 E-value=5.4 Score=28.49 Aligned_cols=37 Identities=16% Similarity=0.166 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhh
Q psy8368 151 VLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLIN 187 (372)
Q Consensus 151 ~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~ 187 (372)
.+..+..+...|...=..|+|.+|+.+|..|+.++-.
T Consensus 9 ~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~ 45 (85)
T 2v6x_A 9 FLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLML 45 (85)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 4677888888888888999999999999999998744
No 293
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=82.46 E-value=6.8 Score=32.40 Aligned_cols=83 Identities=10% Similarity=-0.110 Sum_probs=51.8
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
....++..|......|++.-|..+|.++-.+- .+...|.-.|+-+.-....+.+..
T Consensus 33 ~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~-----------------------~L~~Ly~~tg~~e~L~kla~iA~~- 88 (177)
T 3mkq_B 33 DSITWERLIQEALAQGNASLAEMIYQTQHSFD-----------------------KLSFLYLVTGDVNKLSKMQNIAQT- 88 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHH-----------------------HHHHHHHHHTCHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHhCCHH-----------------------HHHHHHHHhCCHHHHHHHHHHHHH-
Confidence 44578889999999999999999997765441 122334445555554444444442
Q ss_pred hccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHH
Q psy8368 234 ASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTA 268 (372)
Q Consensus 234 ~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~a 268 (372)
. - -+.-...+++.+|+++++++.|.+.
T Consensus 89 ---~-g----~~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 89 ---R-E----DFGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp ---T-T----CHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred ---C-c----cHHHHHHHHHHcCCHHHHHHHHHHC
Confidence 1 1 1233345677788888888777654
No 294
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=82.37 E-value=6.8 Score=38.10 Aligned_cols=82 Identities=17% Similarity=0.039 Sum_probs=68.6
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.-..+-..|....-...+..|...|.+|+.+.|.. ...|+-+|..+.-.+++-+|+-+|.++|-
T Consensus 151 ~hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~---------------G~~~nqLavla~~~~~~l~a~y~y~rsl~- 214 (497)
T 1ya0_A 151 CQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSN---------------GQPYNQLAILASSKGDHLTTIFYYCRSIA- 214 (497)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTB---------------SHHHHHHHHHHHHTTCHHHHHHHHHHHHS-
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCC---------------CchHHHHHHHHhcccccHHHHHHHHHHHh-
Confidence 34567788999888899999999999999998887 57899999999999999999999999995
Q ss_pred hccCCCCchhHHHHHHHHHHh
Q psy8368 234 ASHFATKDVKLFFVWGKALIG 254 (372)
Q Consensus 234 ~~~~~p~~~ka~~r~a~a~~~ 254 (372)
.......|.-++...+..
T Consensus 215 ---~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 215 ---VKFPFPAASTNLQKALSK 232 (497)
T ss_dssp ---SSBCCHHHHHHHHHHHHH
T ss_pred ---cCCCChhHHHHHHHHHHH
Confidence 444567777777776653
No 295
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=81.60 E-value=3.4 Score=40.27 Aligned_cols=72 Identities=17% Similarity=0.143 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCc--hhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKD--VKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~--~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
+.+++-+-..|+.-+.|+.|.....++.- ....-+++ +.=+|-.|+++...++|.+|.++|..|++..|.+.
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~f-P~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLEY-PHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHCS-CTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCcC-CcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 56777888899999999999999999952 00001222 33456679999999999999999999999998764
No 296
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=79.85 E-value=12 Score=27.22 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=33.7
Q ss_pred HHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhcc
Q psy8368 152 LKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQ 189 (372)
Q Consensus 152 ~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~ 189 (372)
+..+-.+-.++..+.+.|+|++||.++.+|..++...-
T Consensus 12 Ln~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAm 49 (97)
T 2crb_A 12 LNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAM 49 (97)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 56788888899999999999999999999999986643
No 297
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=78.06 E-value=34 Score=36.36 Aligned_cols=108 Identities=9% Similarity=-0.021 Sum_probs=80.7
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
....+...-+.+.+.|+.++|...+...-........++ +..|+-+-..|.+.|++++|+..+++-.+.
T Consensus 126 ~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd-----------vvTYNtLI~Glck~G~~~eA~~Lf~eM~~~ 194 (1134)
T 3spa_A 126 QQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT-----------LDMYNAVMLGWARQGAFKELVYVLFMVKDA 194 (1134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC-----------HhHHHHHHHHHHhCCCHHHHHHHHHHHHHc
Confidence 345677888899999999999999976544321111111 578888999999999999999999988761
Q ss_pred hccCCCCchhHHHHHHHHHHhcCC-HHHHHHHHHHHHhh--cCCC
Q psy8368 234 ASHFATKDVKLFFVWGKALIGLQE-WTSAIKHLKTARKL--AAKD 275 (372)
Q Consensus 234 ~~~~~p~~~ka~~r~a~a~~~l~~-~e~A~~~~~~al~l--~p~~ 275 (372)
-+.| |.-.|.-+-.++.+.|+ .++|.+.|+..... .|+.
T Consensus 195 --G~~P-DvvTYntLI~glcK~G~~~e~A~~Ll~EM~~kG~~PD~ 236 (1134)
T 3spa_A 195 --GLTP-DLLSYAAALQCMGRQDQDAGTIERCLEQMSQEGLKLQA 236 (1134)
T ss_dssp --TCCC-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHTCCSHH
T ss_pred --CCCC-cHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCCCCh
Confidence 1333 67788888888988887 57888888887764 4543
No 298
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=76.30 E-value=6.1 Score=40.09 Aligned_cols=62 Identities=15% Similarity=0.100 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhhc----cCCCCchhHHHHHHHHHHhcCCHHHHHHHHH
Q psy8368 205 RVYRNLMVCYNNNKQYKLTCDCASKALQFAS----HFATKDVKLFFVWGKALIGLQEWTSAIKHLK 266 (372)
Q Consensus 205 ~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~----~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~ 266 (372)
..+.++|..+++.++++.|+.+|.++-.... ..-..+.+.+-+++......|+++.|...|.
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~ 747 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYW 747 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 5788899999999999999998887621100 0113344555566666655666665554443
No 299
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=74.55 E-value=21 Score=34.24 Aligned_cols=19 Identities=21% Similarity=0.344 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHhhhhcc
Q psy8368 171 IVSAVRRYRDAVKLLINTQ 189 (372)
Q Consensus 171 ~~~A~~~y~~al~~~~~~~ 189 (372)
-.+|+.+|++|+.++....
T Consensus 448 A~kAi~~Y~~Ai~~L~k~~ 466 (526)
T 2wb7_A 448 AQGAIDEYKAAINDLQKAA 466 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhh
Confidence 3556666666666665554
No 300
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.44 E-value=15 Score=27.94 Aligned_cols=72 Identities=14% Similarity=0.107 Sum_probs=40.7
Q ss_pred cCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC----CccHHHHHHHHHHHHHHHH
Q psy8368 218 KQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAK----DSVRAEIDKEILKADLGNQ 293 (372)
Q Consensus 218 ~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~----~~~~~~~~~~l~~~~~~~~ 293 (372)
..|.+|..+..++|++.+. +.-...+.-|...+..|.+++.+..+ .. ..+.....++.++.
T Consensus 17 ~~h~~AF~~Is~AL~~DE~------------g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g---~~we~Ar~lq~KM~ 81 (116)
T 2dl1_A 17 EAYKKAFLFVNKGLNTDEL------------GQKEEAKNYYKQGIGHLLRGISISSKESEHTG---PGWESARQMQQKMK 81 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHH------------TCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCC---SHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhc------------CCHHHHHHHHHHHHHHHHHhccccccCCCCCC---hhHHHHHHHHHHHH
Confidence 4467888888888873322 22222223334446777788887763 23 45555555666665
Q ss_pred HHHHHHHHHHH
Q psy8368 294 QYQKETKARCM 304 (372)
Q Consensus 294 ~~~~~~~~~~~ 304 (372)
......+.+..
T Consensus 82 ~nL~~v~~RL~ 92 (116)
T 2dl1_A 82 ETLQNVRTRLE 92 (116)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55555554444
No 301
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=73.95 E-value=7.9 Score=36.74 Aligned_cols=66 Identities=11% Similarity=0.052 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhc
Q psy8368 206 VYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLA 272 (372)
Q Consensus 206 l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~ 272 (372)
++..+|..|++.|++.+|+..+.++..... -.......++....++...+++..|...+.++..+-
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~-~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~ 198 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAI-STGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMI 198 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHT-CCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh
Confidence 567899999999999999999999887442 223467789999999999999999999999998764
No 302
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=71.45 E-value=7.3 Score=37.37 Aligned_cols=107 Identities=7% Similarity=-0.027 Sum_probs=68.8
Q ss_pred ccCHHHHHHHHHHHHHhhhhccCCCh-HHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhcc-----CCCC-
Q psy8368 168 DKNIVSAVRRYRDAVKLLINTQVTNY-EDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASH-----FATK- 240 (372)
Q Consensus 168 ~g~~~~A~~~y~~al~~~~~~~~~~~-~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~-----~~p~- 240 (372)
....+.|.....++...+-....++. +.....+....-+.+++..+|+++++..-|.......-. ... .-|.
T Consensus 139 ~~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~-~~~~p~~~~~p~~ 217 (455)
T 3t5v_B 139 HQFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQP-KSMLAHFNEYQLD 217 (455)
T ss_dssp THHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHH-HCCCSCGGGSCHH
T ss_pred hhHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhcc-CCCCcChhhCCcc
Confidence 34566777777777776543322111 000123334456777888999999998887777754322 111 0121
Q ss_pred -chhHHHHHHHHHHhcCCHHHHHHHHHHHHhh-cCCC
Q psy8368 241 -DVKLFFVWGKALIGLQEWTSAIKHLKTARKL-AAKD 275 (372)
Q Consensus 241 -~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l-~p~~ 275 (372)
-+.=+|-+|+.++-.++|.+|.++|..|++. .|.+
T Consensus 218 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 218 QQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred ceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 2234678899999999999999999999999 8765
No 303
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=69.16 E-value=18 Score=36.21 Aligned_cols=53 Identities=8% Similarity=-0.107 Sum_probs=43.7
Q ss_pred HHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy8368 214 YNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARK 270 (372)
Q Consensus 214 ~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~ 270 (372)
.++.++|..|..++...-. ......++.|++|+++..+|+.++|...|.++..
T Consensus 295 Alr~~d~~~a~~~~~~l~~----~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 295 ALGTGDRRGLNTWLARLPM----EAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHTCHHHHHHHHHHSCT----TGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHCCCHHHHHHHHHHccc----cccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 4567999999999876543 2234688999999999999999999999998864
No 304
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=69.12 E-value=19 Score=33.55 Aligned_cols=62 Identities=5% Similarity=-0.034 Sum_probs=51.9
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
......+..+...|++..|+.....++...|.. -.++..+-.+|...|+..+|+..|++.-+
T Consensus 172 ~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~---------------E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 172 LAHTAKAEAEIACGRASAVIAELEALTFEHPYR---------------EPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 455567788889999999999999998876554 46788888999999999999999988765
No 305
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=68.79 E-value=31 Score=25.06 Aligned_cols=26 Identities=15% Similarity=0.113 Sum_probs=15.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy8368 244 LFFVWGKALIGLQEWTSAIKHLKTAR 269 (372)
Q Consensus 244 a~~r~a~a~~~l~~~e~A~~~~~~al 269 (372)
.+-|+|.++...|.|++|+++.++|.
T Consensus 17 ~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 17 QQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 44466666666666666655554444
No 306
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=67.93 E-value=26 Score=27.83 Aligned_cols=35 Identities=17% Similarity=0.056 Sum_probs=29.7
Q ss_pred CCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q psy8368 237 FATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKL 271 (372)
Q Consensus 237 ~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l 271 (372)
..+-++..++.+|.||.++|+..+|-+.+.+|.+-
T Consensus 120 n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 120 NNEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp -CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred cCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 34456889999999999999999999999988764
No 307
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=67.69 E-value=22 Score=37.43 Aligned_cols=95 Identities=15% Similarity=0.022 Sum_probs=64.0
Q ss_pred HHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCCh--HHH------HHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy8368 159 GASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNY--EDQ------MQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKA 230 (372)
Q Consensus 159 k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~--~~~------~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~a 230 (372)
+-+|..++..|++++|..+|++|-.-+........ ... .+...+....|+.++..+-+.+-|+-++..++.|
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lA 923 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 923 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 67999999999999999999987643321111111 000 0111233458889999999999999999999999
Q ss_pred HHhhccCCCCch----hHHHHHHHHHHhcC
Q psy8368 231 LQFASHFATKDV----KLFFVWGKALIGLQ 256 (372)
Q Consensus 231 L~~~~~~~p~~~----ka~~r~a~a~~~l~ 256 (372)
|+. .++++. ..|.|+-+++..+|
T Consensus 924 I~~---~~~dd~~l~~~l~~r~f~~a~a~g 950 (950)
T 4gq2_M 924 DAS---KETDDEDLSIAITHETLKTACAAG 950 (950)
T ss_dssp HHT---CCSCCHHHHHHHHHHHHHHHHHHC
T ss_pred Hhh---cccCCccchHHHHHHHHHHHhhCC
Confidence 983 344433 35667666666554
No 308
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=67.48 E-value=23 Score=25.56 Aligned_cols=69 Identities=17% Similarity=0.109 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHhhHHHHhc---cCHHHHHHHHHHHHHhhhhc---cC-CChHHHHHHHHHHHHHHHHHHHHHHHc
Q psy8368 149 AKVLKRAQELGASGKNAFND---KNIVSAVRRYRDAVKLLINT---QV-TNYEDQMQLEEYLCRVYRNLMVCYNNN 217 (372)
Q Consensus 149 ~~~~~~~~~~k~~Gn~~~~~---g~~~~A~~~y~~al~~~~~~---~~-~~~~~~~~~~~l~~~l~~Nla~~~~kl 217 (372)
....+.+-.+.+.|-..=.. |+-..|+.+|++++..+... +. ...+.+...+.++..-..|+..+-.++
T Consensus 10 k~~h~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL~~v~~RL 85 (89)
T 3eab_A 10 RVFHKQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKDRL 85 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677777777777666 88889999999988877442 11 244567777777777777777766554
No 309
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=64.79 E-value=14 Score=30.43 Aligned_cols=46 Identities=13% Similarity=-0.052 Sum_probs=36.8
Q ss_pred HHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy8368 215 NNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTAR 269 (372)
Q Consensus 215 ~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al 269 (372)
+++|+++.|...++.. ++...|-++|.+.+..|+++-|..+|.++-
T Consensus 16 L~lg~l~~A~e~a~~l---------~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 16 LEYGNLDAALDEAKKL---------NDSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HHTTCHHHHHHHHHHH---------CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HhcCCHHHHHHHHHHh---------CCHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 5678999988887643 345678889999999999999999888764
No 310
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=62.33 E-value=76 Score=30.00 Aligned_cols=67 Identities=9% Similarity=0.001 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCC--chhHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy8368 203 LCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATK--DVKLFFVWGKALIGLQEWTSAIKHLKTAR 269 (372)
Q Consensus 203 ~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~--~~ka~~r~a~a~~~l~~~e~A~~~~~~al 269 (372)
++.+...+|..|...|+|.+|.........-.-..++. -...+....+.|...++|..|...+.++.
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~ 204 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKIL 204 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 45677789999999999999999999886421112222 24467788999999999999999999985
No 311
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=60.68 E-value=31 Score=24.46 Aligned_cols=23 Identities=13% Similarity=-0.061 Sum_probs=9.9
Q ss_pred HHHHHHHHccCHHHHHHHHHHHH
Q psy8368 209 NLMVCYNNNKQYKLTCDCASKAL 231 (372)
Q Consensus 209 Nla~~~~kl~~y~~Ai~~~~~aL 231 (372)
..|.-+-+.|+|.+|+.+|..++
T Consensus 24 ~~Ave~D~~g~y~eAl~lY~~ai 46 (83)
T 2w2u_A 24 INAVKADKEGNAEEAITNYKKAI 46 (83)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHH
Confidence 33444444444444444444443
No 312
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=58.13 E-value=29 Score=24.51 Aligned_cols=15 Identities=20% Similarity=0.118 Sum_probs=7.8
Q ss_pred HHHHHHHHhhcCCCc
Q psy8368 262 IKHLKTARKLAAKDS 276 (372)
Q Consensus 262 ~~~~~~al~l~p~~~ 276 (372)
++.|..+++..|+..
T Consensus 38 ie~l~~~lk~e~d~~ 52 (83)
T 2v6y_A 38 IEVLSQIIVLYPESV 52 (83)
T ss_dssp HHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHCCCHH
Confidence 344555555566554
No 313
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=58.11 E-value=25 Score=33.41 Aligned_cols=97 Identities=9% Similarity=0.031 Sum_probs=60.7
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCC------h-H-HHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHH
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTN------Y-E-DQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCA 227 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~------~-~-~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~ 227 (372)
.-+...++.+...++|.+|..++.....++....... . . ...........++...+..+.+-+.|+.|+..|
T Consensus 36 ~~l~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l~ 115 (436)
T 2yin_A 36 RYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAISLC 115 (436)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 3345678899999999999999866655554322110 0 0 001112233456777777888888999999999
Q ss_pred HHHHHhhccCCCCchhHHHHHHHHHHhcC
Q psy8368 228 SKALQFASHFATKDVKLFFVWGKALIGLQ 256 (372)
Q Consensus 228 ~~aL~~~~~~~p~~~ka~~r~a~a~~~l~ 256 (372)
+..+.+++. +..-|-.++.+|..+.
T Consensus 116 k~L~~~yE~----~~~Dy~~Ls~~~~~~a 140 (436)
T 2yin_A 116 KELAEQYEM----EIFDYELLSQNLIQQA 140 (436)
T ss_dssp HHHHHHHHH----TSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 999864432 2233556666666543
No 314
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=57.26 E-value=1.2e+02 Score=29.26 Aligned_cols=52 Identities=13% Similarity=0.123 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHhhccC-------CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q psy8368 220 YKLTCDCASKALQFASHF-------ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKL 271 (372)
Q Consensus 220 y~~Ai~~~~~aL~~~~~~-------~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l 271 (372)
|+..+.+++.|+..++.. ..+..-|+.-+|++|+..++|++|....++++..
T Consensus 153 ~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 153 YDFILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 667777888887644321 1122337888999999999999999999999864
No 315
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=56.54 E-value=1.1e+02 Score=27.43 Aligned_cols=112 Identities=16% Similarity=0.059 Sum_probs=60.7
Q ss_pred HHHHHHHHHhhHHHHhccCHHHHHHHHH-HHHHhhhhccCCChHHHHHHHHHHHH------------HHHHHHHHHHHcc
Q psy8368 152 LKRAQELGASGKNAFNDKNIVSAVRRYR-DAVKLLINTQVTNYEDQMQLEEYLCR------------VYRNLMVCYNNNK 218 (372)
Q Consensus 152 ~~~~~~~k~~Gn~~~~~g~~~~A~~~y~-~al~~~~~~~~~~~~~~~~~~~l~~~------------l~~Nla~~~~kl~ 218 (372)
++.-+.++...+.|.++++|.+|+.... -|+.++.... ......+--+++. ...++..++....
T Consensus 30 YEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q---~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~p 106 (312)
T 2wpv_A 30 YEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQ---GGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELD 106 (312)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCC---cchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCC
Confidence 3455777888888999999999998844 4454444321 1111111111111 1112222222211
Q ss_pred CH-HHHHHHHHHHHHhhccC---CCCchhHHHHHHHHHHhcCCHHHHHHHHH
Q psy8368 219 QY-KLTCDCASKALQFASHF---ATKDVKLFFVWGKALIGLQEWTSAIKHLK 266 (372)
Q Consensus 219 ~y-~~Ai~~~~~aL~~~~~~---~p~~~ka~~r~a~a~~~l~~~e~A~~~~~ 266 (372)
.- ..=....++++++-... .-.++..+..+|..|..-+++.+|..+|-
T Consensus 107 ~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 107 PSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp TTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 10 01133444444433222 22377788899999999999999998886
No 316
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=55.80 E-value=27 Score=24.14 Aligned_cols=30 Identities=17% Similarity=0.392 Sum_probs=20.9
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 247 VWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 247 r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
.+|..+...|++++|..+|-+|+.+.|+-.
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~ 51 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQ 51 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSCH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHH
Confidence 456667777777777777777777777655
No 317
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=55.65 E-value=1.2e+02 Score=27.55 Aligned_cols=123 Identities=11% Similarity=0.025 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHhhHHHHhccCHHHHHHHHHH-HHHhhhh-------------------cc-CCChHHHHHHHHHH---
Q psy8368 148 FAKVLKRAQELGASGKNAFNDKNIVSAVRRYRD-AVKLLIN-------------------TQ-VTNYEDQMQLEEYL--- 203 (372)
Q Consensus 148 ~~~~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~-al~~~~~-------------------~~-~~~~~~~~~~~~l~--- 203 (372)
+++.++.-+.++...+.|.++++|.+|+..... |+.++.. .. ..+++....+..+.
T Consensus 28 y~~~YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~~~ 107 (336)
T 3lpz_A 28 PEEQYEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLRLF 107 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTS
T ss_pred CccccHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhC
Confidence 344577778889999999999999999986433 3333211 10 11111111111100
Q ss_pred ----------------------------HHHHHHHHHHHHHccCHHHHHHHHH------------HHHHhhccCCCCchh
Q psy8368 204 ----------------------------CRVYRNLMVCYNNNKQYKLTCDCAS------------KALQFASHFATKDVK 243 (372)
Q Consensus 204 ----------------------------~~l~~Nla~~~~kl~~y~~Ai~~~~------------~aL~~~~~~~p~~~k 243 (372)
..+|.-+|..|.+.++|.+|..++- ...++....+|....
T Consensus 108 ~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~~~~~~e~d 187 (336)
T 3lpz_A 108 QPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHLVLGTKESPEVLARMEYEWYKQDESHTAP 187 (336)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHTTSCTTHHHHHHHHHHHHHHTSCGGGHH
T ss_pred CCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHhcCCchHHHHHHHHHHHHHhcCCccHH
Confidence 2477778999999999999977752 222323334455555
Q ss_pred HHHHH-HHHHHhcCCHHHHHHHHHHHHh
Q psy8368 244 LFFVW-GKALIGLQEWTSAIKHLKTARK 270 (372)
Q Consensus 244 a~~r~-a~a~~~l~~~e~A~~~~~~al~ 270 (372)
.+.-+ -..|+.+++...|...+..-.+
T Consensus 188 lfiaRaVL~yL~l~n~~~A~~~~~~f~~ 215 (336)
T 3lpz_A 188 LYCARAVLPYLLVANVRAANTAYRIFTS 215 (336)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 55544 4558899999999886655443
No 318
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=55.05 E-value=61 Score=24.56 Aligned_cols=16 Identities=19% Similarity=0.214 Sum_probs=8.8
Q ss_pred HHHHHHHHHhhcCCCc
Q psy8368 261 AIKHLKTARKLAAKDS 276 (372)
Q Consensus 261 A~~~~~~al~l~p~~~ 276 (372)
|++.|..+++..+.+.
T Consensus 44 Aie~l~~alk~e~~~~ 59 (117)
T 2cpt_A 44 AVQYFLHVVKYEAQGD 59 (117)
T ss_dssp HHHHHHHHHHTSCCCH
T ss_pred HHHHHHHHHHhccCCH
Confidence 3344555556665665
No 319
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=54.93 E-value=54 Score=23.29 Aligned_cols=34 Identities=6% Similarity=0.046 Sum_probs=20.3
Q ss_pred CCCCchhH--HHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy8368 237 FATKDVKL--FFVWGKALIGLQEWTSAIKHLKTARK 270 (372)
Q Consensus 237 ~~p~~~ka--~~r~a~a~~~l~~~e~A~~~~~~al~ 270 (372)
+||...+| +...|.-.-..|+|++|+..|..|++
T Consensus 9 ~~~~~~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 9 MDPQSTAAATVLKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp --CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45554443 44555556677777777777777664
No 320
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=52.87 E-value=31 Score=27.35 Aligned_cols=42 Identities=17% Similarity=0.154 Sum_probs=37.3
Q ss_pred CchhHHHHHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhh
Q psy8368 144 EEPAFAKVLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLL 185 (372)
Q Consensus 144 e~~~~~~~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~ 185 (372)
+..++...+..+..+...|..|...|++..|...|.+.+.++
T Consensus 29 ~~i~l~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~ 70 (146)
T 2xze_A 29 EDIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLF 70 (146)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 345677789999999999999999999999999999987766
No 321
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=52.85 E-value=61 Score=23.29 Aligned_cols=32 Identities=34% Similarity=0.463 Sum_probs=29.0
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHh
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKL 184 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~ 184 (372)
..+..+..+|..+|+.++|.+|+..++++...
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 56778889999999999999999999999865
No 322
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=52.33 E-value=50 Score=28.90 Aligned_cols=54 Identities=17% Similarity=0.145 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Q psy8368 171 IVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNN-NKQYKLTCDCASKALQ 232 (372)
Q Consensus 171 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~k-l~~y~~Ai~~~~~aL~ 232 (372)
-+.|...|+.|+.+. ..-.++. .++..+.+|.+..|+. +++.++|+..+.+|..
T Consensus 172 ~e~a~~aY~~A~~iA-~~L~pth-------PirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 172 AEDALKAYKDATVVA-KDLEPTH-------PIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHH-TTSCTTC-------HHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HhCCCCC-------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 357788899999987 4323322 2557788888888886 8999999998888774
No 323
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=52.27 E-value=31 Score=23.85 Aligned_cols=32 Identities=13% Similarity=0.095 Sum_probs=26.9
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhh
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLIN 187 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~ 187 (372)
...-..|-.+...|++++|+.+|.+|+..++.
T Consensus 18 l~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 18 LEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 34456888899999999999999999998754
No 324
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=51.02 E-value=38 Score=24.24 Aligned_cols=38 Identities=11% Similarity=0.031 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhh
Q psy8368 148 FAKVLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLL 185 (372)
Q Consensus 148 ~~~~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~ 185 (372)
..+.++.+..|.+.|.-++++|++..|+.++.-|--.+
T Consensus 28 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwL 65 (86)
T 2oo2_A 28 DEGFMRNIEAYISDSRYFLEKGDLVRAFECVVWAWAWL 65 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 45688999999999999999999999999977665544
No 325
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=50.95 E-value=19 Score=37.34 Aligned_cols=58 Identities=22% Similarity=0.373 Sum_probs=46.2
Q ss_pred CCCCCEEEEEEEEEEcCCce-------------------------------eEeecccCCCcCeEEEcCCCccchHHHHH
Q psy8368 29 PVLGAHVQVHYMYYAEANEL-------------------------------PIDITYLRKSIPERFQLGSSGLIPAFEYA 77 (372)
Q Consensus 29 ~~~g~~V~v~y~~~~~~~~~-------------------------------~~dst~~~~~~~~~~~~g~~~~~~~le~~ 77 (372)
|..|+.|.|.|+..+..+++ .++| .+ .+.|.+|.|.+.+-++..
T Consensus 561 i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies----~~-e~~fe~g~g~~~~~le~v 635 (950)
T 3htx_A 561 ITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIES----NE-EIEFEVGTGSMNPHIESE 635 (950)
T ss_dssp CCTTEEEEEEEEEEEEECC----------------------------CCCEEEEE----EE-EEEEEETTTCBCHHHHHH
T ss_pred cCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccc----cH-HHHHHHhcCCccchhhhe
Confidence 68999999999998753221 1111 12 678999999999999999
Q ss_pred hccCCCCcEEEEEe
Q psy8368 78 ILSMQKGEKSDFFA 91 (372)
Q Consensus 78 l~~m~~Ge~~~~~i 91 (372)
|..|..|+...|..
T Consensus 636 V~qms~gqT~~F~~ 649 (950)
T 3htx_A 636 VTQMTVGEYASFKM 649 (950)
T ss_dssp HTTCCTTCEEEEEE
T ss_pred eeeccccceeEEec
Confidence 99999999999884
No 326
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=50.66 E-value=49 Score=28.50 Aligned_cols=55 Identities=15% Similarity=0.164 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Q psy8368 171 IVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNN-NKQYKLTCDCASKALQ 232 (372)
Q Consensus 171 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~k-l~~y~~Ai~~~~~aL~ 232 (372)
-+.|...|+.|+.+....-.++. .++..+.+|.+..|+. +++.++|+..+.+|..
T Consensus 146 ~e~a~~aY~~A~~iA~~~L~pth-------PirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 146 AENSLVAYKAASDIAMTELPPTH-------PIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTC-------HHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCCC-------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 35778889999988753222222 2557788888888876 8999999998887764
No 327
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=50.63 E-value=41 Score=24.11 Aligned_cols=39 Identities=15% Similarity=0.096 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhh
Q psy8368 147 AFAKVLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLL 185 (372)
Q Consensus 147 ~~~~~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~ 185 (372)
...+.++.+..|.+.|.-++++|++..|+.++.-|--.+
T Consensus 31 ~a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwL 69 (87)
T 2pmr_A 31 DEEAVVERALNYRDDSVYYLEKGDHITSFGCITYAHGLL 69 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 345788999999999999999999999999876665543
No 328
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=50.50 E-value=1.1e+02 Score=25.33 Aligned_cols=123 Identities=7% Similarity=-0.139 Sum_probs=76.2
Q ss_pred HHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhh-hhccCCChHHHHHH--HHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy8368 153 KRAQELGASGKNAFNDKNIVSAVRRYRDAVKLL-INTQVTNYEDQMQL--EEYLCRVYRNLMVCYNNNKQYKLTCDCASK 229 (372)
Q Consensus 153 ~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~-~~~~~~~~~~~~~~--~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~ 229 (372)
..++...-+.-.+.+.++|..|+.+.+..+.-- +..|.-+-....-+ ..-..-.++.+|..+.+.|+-++||.++..
T Consensus 60 NT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~ 139 (242)
T 3kae_A 60 NTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVR 139 (242)
T ss_dssp CBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhh
Confidence 346666777888889999999999998888321 11111000000000 000024567788888999999999999987
Q ss_pred HHHhh-----------cc-----C----------------------------CCCchh----------HH--HHHHHHHH
Q psy8368 230 ALQFA-----------SH-----F----------------------------ATKDVK----------LF--FVWGKALI 253 (372)
Q Consensus 230 aL~~~-----------~~-----~----------------------------~p~~~k----------a~--~r~a~a~~ 253 (372)
..... +. . .|++++ .| ...|+-|.
T Consensus 140 Sf~~~~lf~~vEnliyeN~vp~~~d~~~i~~~~~~~i~~~y~~d~~~lHe~~s~~~ikkY~n~iPGiGSY~va~aa~~yf 219 (242)
T 3kae_A 140 SFGKSFLFSPVENLLLENKVPQKRDKENVRQTGRRGIEEEYVSDSIEFHESLSPSLVKKYMEHVPGIGSYFISNAARRYF 219 (242)
T ss_dssp HHHHCCCHHHHHHHHHTTCCCCCC-----------CHHHHHHHHHHHHHHHCCHHHHHHHHTSTTTHHHHHHHHHHHHHH
T ss_pred hcCCccccchHHHHHhhcCCCcccchHHHHhhhhccchhhhhhhHHHHHHhccHHHHHHHHHhCCCchhHHHHHHHHHHH
Confidence 65311 00 0 122222 12 24567788
Q ss_pred hcCCHHHHHHHHHHHHhhcCCC
Q psy8368 254 GLQEWTSAIKHLKTARKLAAKD 275 (372)
Q Consensus 254 ~l~~~e~A~~~~~~al~l~p~~ 275 (372)
.+|-.++....|....+.||..
T Consensus 220 ~lg~~d~s~~lf~~lR~kDP~F 241 (242)
T 3kae_A 220 NLGMNDKSKACFELVRRKDPMF 241 (242)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTT
T ss_pred hcccchhHHHHHHHHHhcCCCc
Confidence 8999999999999988888853
No 329
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=49.59 E-value=17 Score=25.60 Aligned_cols=33 Identities=15% Similarity=-0.022 Sum_probs=27.5
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhh
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLIN 187 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~ 187 (372)
....-..|..+...|+|+.|+.+|+.+++.+..
T Consensus 12 i~e~~k~ARe~Al~GnYdta~~yY~g~~~qI~k 44 (78)
T 2rpa_A 12 IVENVKLAREYALLGNYDSAMVYYQGVLDQMNK 44 (78)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 445556788899999999999999999988755
No 330
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=49.46 E-value=90 Score=28.79 Aligned_cols=30 Identities=27% Similarity=0.416 Sum_probs=22.7
Q ss_pred hhHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q psy8368 242 VKLFFVWGKALIGLQEWTSAIKHLKTARKL 271 (372)
Q Consensus 242 ~ka~~r~a~a~~~l~~~e~A~~~~~~al~l 271 (372)
+.|+|+.|..+...+++.+|+..|+.|.+.
T Consensus 253 A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~ 282 (376)
T 3r9m_A 253 AYAYCYHGETLLASDKCGEAIRSLQEAEKL 282 (376)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 347777788888888888888888777643
No 331
>2pn0_A Prokaryotic transcription elongation factor GREA/GREB; structural genomics, APC6349, PSI-2, protein structure initiative; HET: MSE; 1.70A {Nitrosomonas europaea}
Probab=48.61 E-value=44 Score=26.22 Aligned_cols=24 Identities=13% Similarity=0.292 Sum_probs=19.8
Q ss_pred chHHHHHhccCCCCcEEEEEecCC
Q psy8368 71 IPAFEYAILSMQKGEKSDFFASYE 94 (372)
Q Consensus 71 ~~~le~~l~~m~~Ge~~~~~i~~~ 94 (372)
..-|-.||++.++|+.+.+..|..
T Consensus 94 ~SPlG~ALlGk~vGD~v~v~~P~G 117 (141)
T 2pn0_A 94 LAPVGSALLGLAQGDEIEWPKPGG 117 (141)
T ss_dssp TSTTHHHHTTCBTTCEEEEECTTS
T ss_pred CCHHHHHHcCCCCCCEEEEEcCCC
Confidence 345779999999999999988644
No 332
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=46.76 E-value=34 Score=28.71 Aligned_cols=29 Identities=10% Similarity=-0.079 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
+..++-+|..++-.++|.+|-.++..|++
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~ 42 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFE 42 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 56677788888888888888888888887
No 333
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=46.67 E-value=61 Score=28.13 Aligned_cols=55 Identities=16% Similarity=0.197 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Q psy8368 171 IVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNN-NKQYKLTCDCASKALQ 232 (372)
Q Consensus 171 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~k-l~~y~~Ai~~~~~aL~ 232 (372)
-+.|...|+.|..+......++. .++..+.+|.+..|+. +++.++|+..+.+|..
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~pth-------PirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQPTH-------PIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTC-------HHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCC-------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 46778889999887653222222 3556788888888776 7889999888887764
No 334
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=46.48 E-value=62 Score=28.33 Aligned_cols=55 Identities=15% Similarity=0.164 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Q psy8368 171 IVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNN-NKQYKLTCDCASKALQ 232 (372)
Q Consensus 171 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~k-l~~y~~Ai~~~~~aL~ 232 (372)
-+.|...|+.|..+....-.++. .++..+.+|.+..|+. +++.++|+..+.+|..
T Consensus 172 ~e~a~~aY~~A~~iA~~~L~pTh-------PirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 172 AENSLVAYKAASDIAMTELPPTH-------PIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTC-------HHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCC-------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 35677889999887643222222 3557788888888776 7899999988887764
No 335
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=45.89 E-value=62 Score=28.31 Aligned_cols=55 Identities=16% Similarity=0.196 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Q psy8368 171 IVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNN-NKQYKLTCDCASKALQ 232 (372)
Q Consensus 171 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~k-l~~y~~Ai~~~~~aL~ 232 (372)
-+.|...|+.|+.+....-.++. .++..+.+|.+..|+. +++.++|+..+.+|..
T Consensus 151 ~e~a~~aY~~A~~iA~~~L~pth-------PirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTELAPTH-------PIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTC-------HHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCC-------cHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 35678889999988753222222 2557788888888776 7889999888888764
No 336
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=45.12 E-value=1e+02 Score=24.72 Aligned_cols=70 Identities=11% Similarity=-0.092 Sum_probs=52.8
Q ss_pred hccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHH
Q psy8368 167 NDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFF 246 (372)
Q Consensus 167 ~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~ 246 (372)
..++.+.|-..|+.|+...... +.++...|.--.+.|+...|.....+|+. +.|.. +-++
T Consensus 72 ei~D~d~aR~vy~~a~~~hKkF---------------AKiwi~~AqFEiRqgnl~kARkILg~AiG----~~~k~-~~~l 131 (161)
T 4h7y_A 72 AIQEPDDARDYFQMARANCKKF---------------AFVHISFAQFELSQGNVKKSKQLLQKAVE----RGAVP-LEML 131 (161)
T ss_dssp HHHCGGGCHHHHHHHHHHCTTB---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----TTCBC-HHHH
T ss_pred HhcCHHHHHHHHHHHHHHhHHH---------------HHHHHHHHHHHHHcccHHHHHHHHHHHhc----cCCCc-HHHH
Confidence 4478888999999998863332 67888889999999999999999999997 66643 3455
Q ss_pred HHHHHHHhcC
Q psy8368 247 VWGKALIGLQ 256 (372)
Q Consensus 247 r~a~a~~~l~ 256 (372)
..|..-+..|
T Consensus 132 e~a~~nl~~~ 141 (161)
T 4h7y_A 132 EIALRNLNLQ 141 (161)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHhhhcC
Confidence 5555555444
No 337
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=45.02 E-value=67 Score=29.86 Aligned_cols=27 Identities=19% Similarity=0.087 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy8368 244 LFFVWGKALIGLQEWTSAIKHLKTARK 270 (372)
Q Consensus 244 a~~r~a~a~~~l~~~e~A~~~~~~al~ 270 (372)
|+|+.|..+...+++-+|+..++.|.+
T Consensus 259 A~y~~a~~~~e~~k~GeaIa~L~~A~~ 285 (392)
T 1zb1_A 259 SAYYHGLHLEEENRVGEAIAFLDFSMQ 285 (392)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 567777777778888888888887764
No 338
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=43.58 E-value=1.2e+02 Score=23.90 Aligned_cols=48 Identities=13% Similarity=0.043 Sum_probs=39.9
Q ss_pred ccCchhHHHHHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhcc
Q psy8368 142 QVEEPAFAKVLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQ 189 (372)
Q Consensus 142 ~~e~~~~~~~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~ 189 (372)
.++..++..-++.+..+...|..+...|+...|-..|.+-+.++...+
T Consensus 29 ~d~~ipl~~y~rsa~~L~r~A~~y~~EGd~E~AYilymRy~~L~~kIp 76 (144)
T 2a9u_A 29 KPEKISTKSYVHSALKIFKTAEECRLDRDEERAYVLYMKYVTVYNLIK 76 (144)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCcHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHh
Confidence 344456666789999999999999999999999999999888875443
No 339
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=43.38 E-value=48 Score=24.19 Aligned_cols=32 Identities=13% Similarity=0.095 Sum_probs=26.4
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhh
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLIN 187 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~ 187 (372)
...-..|-.++..|+++.|+.+|.+|+.+++.
T Consensus 21 l~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 21 LEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 44456788888899999999999999998754
No 340
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=42.69 E-value=84 Score=21.94 Aligned_cols=26 Identities=12% Similarity=0.036 Sum_probs=14.7
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy8368 245 FFVWGKALIGLQEWTSAIKHLKTARK 270 (372)
Q Consensus 245 ~~r~a~a~~~l~~~e~A~~~~~~al~ 270 (372)
...+|+=|..+|+|+.|+.+|+-+++
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 34455555666666666666665553
No 341
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=42.65 E-value=50 Score=26.48 Aligned_cols=25 Identities=12% Similarity=0.122 Sum_probs=20.8
Q ss_pred ccchHHHHHhccCCCCcEEEEEecC
Q psy8368 69 GLIPAFEYAILSMQKGEKSDFFASY 93 (372)
Q Consensus 69 ~~~~~le~~l~~m~~Ge~~~~~i~~ 93 (372)
.+..-|-.||+|.++|+.+.+..|.
T Consensus 119 S~~SPlg~ALlGk~vGD~v~v~~P~ 143 (158)
T 2p4v_A 119 SIDSPMARALLKKEVGDLAVVNTPA 143 (158)
T ss_dssp CTTSHHHHHSTTCCTTCEEEEECSS
T ss_pred cCCCHHHHHhcCCCCCCEEEEEcCC
Confidence 3455688999999999999998863
No 342
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=41.65 E-value=59 Score=32.59 Aligned_cols=51 Identities=6% Similarity=-0.098 Sum_probs=45.6
Q ss_pred hhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHH
Q psy8368 242 VKLFFVWGKALIGLQEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQQY 295 (372)
Q Consensus 242 ~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~~~ 295 (372)
..+...+|+..+..|+|.-|.+.+..++..+|+|. +++..++.+.+.+...
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~---~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNR---AARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcH---HHHHHHHHHHHHHHHh
Confidence 34688899999999999999999999999999999 9999999988877654
No 343
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=41.51 E-value=1.1e+02 Score=29.67 Aligned_cols=105 Identities=11% Similarity=-0.034 Sum_probs=62.9
Q ss_pred HHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 154 RAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 154 ~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
.+.=+.-.|..+.-+++|.+|..++..|++.++....... .+..++--+-.|-+-+|+...-- .+
T Consensus 269 ~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~a~g--------fr~~a~K~lI~V~LLlG~iP~r~-----lf-- 333 (523)
T 4b4t_S 269 EARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSKSLG--------FLQQSNKLHCCIQLLMGDIPELS-----FF-- 333 (523)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSSSCSH--------HHHHHHHHHHHHHHHHTCCCCHH-----HH--
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcchhhhh--------HHHHHHHHHHhHHhhcCCCCChH-----Hh--
Confidence 4555667899999999999999999999988765432221 11233333334444457654311 11
Q ss_pred hccCCCC---chhHHHHHHHHHHh--cCCHHHHHHHHHHHHhhcCCCc
Q psy8368 234 ASHFATK---DVKLFFVWGKALIG--LQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 234 ~~~~~p~---~~ka~~r~a~a~~~--l~~~e~A~~~~~~al~l~p~~~ 276 (372)
..+. ....|+.++.|+.. +..|+.+++.++..+..+-...
T Consensus 334 ---~q~~l~~~L~pY~~Lv~Avr~GdL~~F~~~L~~h~~~F~~Dgty~ 378 (523)
T 4b4t_S 334 ---HQSNMQKSLLPYYHLTKAVKLGDLKKFTSTITKYKQLLLKDDTYQ 378 (523)
T ss_dssp ---TTTSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHHTTCTH
T ss_pred ---hchhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHhcceeccCChhH
Confidence 1222 13457788888743 2345666777777777775554
No 344
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=39.83 E-value=1.8e+02 Score=28.13 Aligned_cols=52 Identities=13% Similarity=0.142 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHhhcc---C------CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q psy8368 220 YKLTCDCASKALQFASH---F------ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKL 271 (372)
Q Consensus 220 y~~Ai~~~~~aL~~~~~---~------~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l 271 (372)
|+..+.+++.|+..++. . .++..-|+.-+|++|+-.++|++|....+.++..
T Consensus 167 ~~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 167 LKWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALAFLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp HHHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 56677778888764321 0 1122337888899999999999999999999863
No 345
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=39.71 E-value=1e+02 Score=22.10 Aligned_cols=71 Identities=14% Similarity=0.064 Sum_probs=41.0
Q ss_pred cCHHHHHHHHHHHHHhhcc---CCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC-CccHHHHHHHHHHHHHHHH
Q psy8368 218 KQYKLTCDCASKALQFASH---FATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAK-DSVRAEIDKEILKADLGNQ 293 (372)
Q Consensus 218 ~~y~~Ai~~~~~aL~~~~~---~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~-~~~~~~~~~~l~~~~~~~~ 293 (372)
..|+.|..+..++|.+.+. -++..+..||+.| +..|.+++.+.-. .. ..+.....++.++.
T Consensus 11 ~~h~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkG------------i~eL~~Gi~V~~~g~G---~~we~Ar~LQ~KM~ 75 (89)
T 3eab_A 11 VFHKQAFEYISIALRIDEDEKAGQKEQAVEWYKKG------------IEELEKGIAVIVTGQG---EQCERARRLQAKMM 75 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHH------------HHHHHHHHHSCCCCCS---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHH------------HHHHHhhcCCccCCCC---hhHHHHHHHHHHHH
Confidence 4578888888888875444 2233444566555 4556666765432 33 45555566666666
Q ss_pred HHHHHHHHHH
Q psy8368 294 QYQKETKARC 303 (372)
Q Consensus 294 ~~~~~~~~~~ 303 (372)
......+.+.
T Consensus 76 ~nL~~v~~RL 85 (89)
T 3eab_A 76 TNLVMAKDRL 85 (89)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555444443
No 346
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=39.55 E-value=83 Score=27.08 Aligned_cols=55 Identities=15% Similarity=0.072 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Q psy8368 171 IVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNN-NKQYKLTCDCASKALQ 232 (372)
Q Consensus 171 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~k-l~~y~~Ai~~~~~aL~ 232 (372)
-+.|...|+.|..+....-.++. .++..+.+|.+..|+. +++.++|+..+.+|.+
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pth-------PirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTN-------PIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTC-------HHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCC-------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 46778889999987654322222 3557788888888774 6889999998887764
No 347
>3bmb_A Regulator of nucleoside diphosphate kinase; RNA polymerase, elongation factor, anti-GRE factor, RNA binding protein; 1.91A {Escherichia coli}
Probab=38.90 E-value=46 Score=25.89 Aligned_cols=25 Identities=12% Similarity=0.219 Sum_probs=20.9
Q ss_pred cchHHHHHhccCCCCcEEEEEecCC
Q psy8368 70 LIPAFEYAILSMQKGEKSDFFASYE 94 (372)
Q Consensus 70 ~~~~le~~l~~m~~Ge~~~~~i~~~ 94 (372)
+..-|-.||++.++|+.+.+..|..
T Consensus 90 ~~SPlG~ALlGk~~GD~v~v~~p~G 114 (136)
T 3bmb_A 90 VMAPVGAALLGLRVGDSIHWELPGG 114 (136)
T ss_dssp TTSHHHHHHTTCBTTCEEEEEETTT
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCCC
Confidence 3456889999999999999998744
No 348
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=38.79 E-value=32 Score=27.56 Aligned_cols=24 Identities=13% Similarity=0.117 Sum_probs=20.1
Q ss_pred chHHHHHhccCCCCcEEEEEecCC
Q psy8368 71 IPAFEYAILSMQKGEKSDFFASYE 94 (372)
Q Consensus 71 ~~~le~~l~~m~~Ge~~~~~i~~~ 94 (372)
..-|-.||+|.++|+.+.+..|..
T Consensus 122 ~SPlG~ALlGk~~GD~v~~~~p~G 145 (156)
T 2f23_A 122 ASPMGKALLGHRVGDVLSLDTPKG 145 (156)
T ss_dssp TSHHHHHHTTCCTTCEEEEEETTE
T ss_pred CCHHHHHHcCCCCCCEEEEEcCCC
Confidence 345789999999999999998743
No 349
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=38.48 E-value=2.2e+02 Score=30.32 Aligned_cols=72 Identities=7% Similarity=-0.049 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhh-ccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHh--hcCCCc
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFA-SHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARK--LAAKDS 276 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~-~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~--l~p~~~ 276 (372)
...|+-+-.+|.+.|+.++|...+..-.+.. .-+ .-|+..|.-+-..|...|++++|++.|....+ +.|+-.
T Consensus 127 ~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~-~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvv 201 (1134)
T 3spa_A 127 QQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRK-LLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLL 201 (1134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHT-TCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCC-CCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHH
Confidence 4567778889999999999999997643210 012 33677899999999999999999999999876 457654
No 350
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=38.19 E-value=40 Score=24.59 Aligned_cols=30 Identities=17% Similarity=0.392 Sum_probs=23.6
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 247 VWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 247 r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
.+|..+...|+++.|+.+|-+|+.+.|+-.
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~ 54 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQ 54 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHH
Confidence 467777888888888888888888887655
No 351
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=37.01 E-value=1.2e+02 Score=21.88 Aligned_cols=22 Identities=18% Similarity=-0.085 Sum_probs=10.7
Q ss_pred HHHHHHHccCHHHHHHHHHHHH
Q psy8368 210 LMVCYNNNKQYKLTCDCASKAL 231 (372)
Q Consensus 210 la~~~~kl~~y~~Ai~~~~~aL 231 (372)
-|--+++.++|.+|+..++++.
T Consensus 59 eak~~y~~~ny~ea~~l~~k~~ 80 (106)
T 2vkj_A 59 EGKDLFETANYGEALVFFEKAL 80 (106)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhcchhHHHHHHHHHH
Confidence 3344444555555555555554
No 352
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=36.06 E-value=1.7e+02 Score=27.85 Aligned_cols=51 Identities=14% Similarity=0.182 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHhhccC----CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy8368 220 YKLTCDCASKALQFASHF----ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARK 270 (372)
Q Consensus 220 y~~Ai~~~~~aL~~~~~~----~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~ 270 (372)
|+..+.+++.|+..++.. .++..-|+.-+|++|+..++|++|+...++++.
T Consensus 154 y~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 154 WAQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 677788888887644321 112233777899999999999999999988864
No 353
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=36.01 E-value=1.9e+02 Score=27.31 Aligned_cols=52 Identities=6% Similarity=-0.149 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHhhccCC-------------------CCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q psy8368 220 YKLTCDCASKALQFASHFA-------------------TKDVKLFFVWGKALIGLQEWTSAIKHLKTARKL 271 (372)
Q Consensus 220 y~~Ai~~~~~aL~~~~~~~-------------------p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l 271 (372)
|+..+.+++.|+..++... ++..-|+.-+|++|+-.++|++|+...++++..
T Consensus 156 y~~I~~DL~~A~~~Lp~~~~~~~~~~~~~~~~~~~~~r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 156 LSYAKAELLTAIEDLPYQYGTQTNLYYGSYGAQWQGKLFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHCCSSCCCSSSCBTTBCGGGGTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCccccccccccccccccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 6777788888877543211 112237778899999999999999999999865
No 354
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=34.98 E-value=35 Score=27.39 Aligned_cols=25 Identities=0% Similarity=-0.024 Sum_probs=17.3
Q ss_pred cchHHHHHhccCCCCcEEEEEecCC
Q psy8368 70 LIPAFEYAILSMQKGEKSDFFASYE 94 (372)
Q Consensus 70 ~~~~le~~l~~m~~Ge~~~~~i~~~ 94 (372)
+..-|-.||+|.++|+.+.+..|..
T Consensus 122 ~~SPlG~ALlGk~~GD~v~v~~p~G 146 (158)
T 1grj_A 122 VNSPIARGLIGKEEDDVVVIKTPGG 146 (158)
T ss_dssp SSSHHHHHHTTCBTTCEECC-----
T ss_pred CCCHHHHHHcCCCCCCEEEEEcCCC
Confidence 4456889999999999999888743
No 355
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=34.86 E-value=80 Score=27.73 Aligned_cols=55 Identities=18% Similarity=0.093 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHhhhhcc--CCChHHHHHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Q psy8368 171 IVSAVRRYRDAVKLLINTQ--VTNYEDQMQLEEYLCRVYRNLMVCYNN-NKQYKLTCDCASKALQ 232 (372)
Q Consensus 171 ~~~A~~~y~~al~~~~~~~--~~~~~~~~~~~~l~~~l~~Nla~~~~k-l~~y~~Ai~~~~~aL~ 232 (372)
-+.|...|+.|..+....- .| .+.++.-+.+|.+..|+. +++.++|+..+.+|.+
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~p-------ThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFd 225 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKYP-------SDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQ 225 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGG-------GCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC-------CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 4667788999988764321 11 223567788898888884 7899999999998876
No 356
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=33.25 E-value=1.9e+02 Score=23.21 Aligned_cols=59 Identities=10% Similarity=0.054 Sum_probs=43.1
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHHhhccCCCCc------hhHHHH-HHHH--HHhcCCHHHHHHHHHHHHhh
Q psy8368 209 NLMVCYNNNKQYKLTCDCASKALQFASHFATKD------VKLFFV-WGKA--LIGLQEWTSAIKHLKTARKL 271 (372)
Q Consensus 209 Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~------~ka~~r-~a~a--~~~l~~~e~A~~~~~~al~l 271 (372)
..+..++..|+|-+|-+.++.+=+ ..+.. .+++.+ +|.+ +...|+...|...+.+|+..
T Consensus 37 ~~~i~lFn~g~yfeaHEvLEe~W~----~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 37 VHGVRLYNSGEFHESHDCFEDEWY----NYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTT----TTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCchHHHHHHHHHHH----hcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 345566667999999999998875 32222 456666 5555 45679999999999999873
No 357
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=31.64 E-value=9.9 Score=33.35 Aligned_cols=38 Identities=13% Similarity=0.161 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhc
Q psy8368 151 VLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINT 188 (372)
Q Consensus 151 ~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~ 188 (372)
.+..|..+-.+|..+=+.|+|.+|+.+|..|+.++-..
T Consensus 19 ~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~a 56 (257)
T 2ymb_A 19 QSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQV 56 (257)
T ss_dssp --------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 35667788888888999999999999999999988553
No 358
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=31.18 E-value=3e+02 Score=24.92 Aligned_cols=68 Identities=9% Similarity=-0.084 Sum_probs=40.7
Q ss_pred HHHHhhHHHHhccCH---HHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy8368 157 ELGASGKNAFNDKNI---VSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQF 233 (372)
Q Consensus 157 ~~k~~Gn~~~~~g~~---~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~ 233 (372)
+-..+-...+..|+| -+|...|+......-... ..++ .+.+++.-|..+++.|++..|.+.+.-.+++
T Consensus 14 ~~i~rl~~~I~~G~y~~~YEAHQ~~RTi~~Ry~~~k-~y~e--------AidLL~~GA~~ll~~~Q~~sg~DL~~llvev 84 (336)
T 3lpz_A 14 RIIARLQRRIAEGQPEEQYEAAQETRLVAARYSKQG-NWAA--------AVDILASVSQTLLRSGQGGSGGDLAVLLVDT 84 (336)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CHHH--------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCccccHHHHHHHHHHHHHHhhc-CHHH--------HHHHHHHHHHHHHHCCCcchHHHHHHHHHHH
Confidence 333444456677899 899998877654432211 1111 1456667777777777777777766544443
No 359
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=31.00 E-value=1.4e+02 Score=21.08 Aligned_cols=29 Identities=7% Similarity=-0.008 Sum_probs=20.2
Q ss_pred CCHHHHHHHHHHHHhhcCCCccHHHHHHHHHH
Q psy8368 256 QEWTSAIKHLKTARKLAAKDSVRAEIDKEILK 287 (372)
Q Consensus 256 ~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~ 287 (372)
++..+++..-.++|+.+|+|+ .+..++..
T Consensus 24 ~~~~~~v~~Ai~~L~~~PsnP---a~LAeyQ~ 52 (85)
T 2ca5_A 24 QTLQGELTLALDKLAKNPSNP---QLLAEYQS 52 (85)
T ss_dssp HHHHHHHHHHHHHHHHCTTCH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCH---HHHHHHHH
Confidence 455667777778888999999 55444443
No 360
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=30.94 E-value=60 Score=32.57 Aligned_cols=50 Identities=8% Similarity=-0.031 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCH
Q psy8368 205 RVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEW 258 (372)
Q Consensus 205 ~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~ 258 (372)
......|...+..|+|.-|...++.++. .+|+|..|..-+|.+|..+|.-
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~----~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVF----AEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHh----cCCCcHHHHHHHHHHHHHHHHh
Confidence 3455678888899999999999999997 8999999999999999998843
No 361
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=30.77 E-value=53 Score=34.54 Aligned_cols=52 Identities=15% Similarity=0.127 Sum_probs=37.3
Q ss_pred HHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy8368 211 MVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARK 270 (372)
Q Consensus 211 a~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~ 270 (372)
+..++..+.|+-|. ..+. .-|.++-.-|-+|.+|...|++++|..+|++|..
T Consensus 817 ~~~L~~~~~~~~a~----eL~~----~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~ 868 (950)
T 4gq2_M 817 VEKLFLFKQYNACM----QLIG----WLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSL 868 (950)
T ss_dssp HHHHHHTTCHHHHH----HHGG----GCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCC
T ss_pred HHHHHHhcHHHHHH----HHHh----hcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhh
Confidence 33344555555332 2333 4466777789999999999999999999999874
No 362
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=29.87 E-value=3.3e+02 Score=25.00 Aligned_cols=68 Identities=4% Similarity=-0.112 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccC---CCC-chhHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHF---ATK-DVKLFFVWGKALIGLQEWTSAIKHLKTARKL 271 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~---~p~-~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l 271 (372)
.-+..-++..|+..++...|....+++-..+... +|. +.+-|.-.+..|...++|..+..+.-..+..
T Consensus 127 l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~ 198 (393)
T 4b4t_O 127 LLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLST 198 (393)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 3456677889999999999999888886544333 222 2233334566778889999988887777753
No 363
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=29.39 E-value=1.5e+02 Score=29.94 Aligned_cols=27 Identities=11% Similarity=-0.032 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHh
Q psy8368 244 LFFVWGKALIGLQEWTSAIKHLKTARK 270 (372)
Q Consensus 244 a~~r~a~a~~~l~~~e~A~~~~~~al~ 270 (372)
|+|+.|..+...+++-+|+..++.|..
T Consensus 262 A~y~~a~~~~e~~k~GeaIa~L~~A~~ 288 (704)
T 2xs1_A 262 AEYHQSILAKQQYYFGEEIARLQHAAE 288 (704)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHhHHHHHHHHHHHHHH
Confidence 577777778888899999988887764
No 364
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=28.74 E-value=3.2e+02 Score=24.42 Aligned_cols=116 Identities=6% Similarity=-0.125 Sum_probs=69.5
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCC-hHH------------------HHHHHHHH------------
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTN-YED------------------QMQLEEYL------------ 203 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~-~~~------------------~~~~~~l~------------ 203 (372)
.+-+..-+..+++.|++..|...-.-.++.+.....+- ++. ..-++...
T Consensus 53 idlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~G 132 (312)
T 2wpv_A 53 IELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFG 132 (312)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTC
T ss_pred HHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCC
Confidence 34455666777889999988886555555443332111 111 11111111
Q ss_pred -HHHHHHHHHHHHHccCHHHHHHHHH------------HHHHhhcc---CCCCchhHHHHHH-HHHHhcCCHHHHHHHHH
Q psy8368 204 -CRVYRNLMVCYNNNKQYKLTCDCAS------------KALQFASH---FATKDVKLFFVWG-KALIGLQEWTSAIKHLK 266 (372)
Q Consensus 204 -~~l~~Nla~~~~kl~~y~~Ai~~~~------------~aL~~~~~---~~p~~~ka~~r~a-~a~~~l~~~e~A~~~~~ 266 (372)
..+|.-+|..|.+-++|.+|..++- ...++... ..|.....+.-|| ..|+.+++...|...|.
T Consensus 133 dp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~~~ 212 (312)
T 2wpv_A 133 DPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISFAHESKD 212 (312)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 2578889999999999999988763 12222223 2334444444444 45788999999988888
Q ss_pred HHHh
Q psy8368 267 TARK 270 (372)
Q Consensus 267 ~al~ 270 (372)
...+
T Consensus 213 ~f~~ 216 (312)
T 2wpv_A 213 IFLE 216 (312)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 365
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=27.90 E-value=1.7e+02 Score=21.06 Aligned_cols=35 Identities=3% Similarity=-0.048 Sum_probs=23.1
Q ss_pred CCHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHH
Q psy8368 256 QEWTSAIKHLKTARKLAAKDSVRAEIDKEILKADLGNQ 293 (372)
Q Consensus 256 ~~~e~A~~~~~~al~l~p~~~~~~~~~~~l~~~~~~~~ 293 (372)
+....++..-..+++.+|+|+ .+..++........
T Consensus 30 ~~~~~~l~~Al~~L~~~psNP---a~LAe~Qa~lseyn 64 (92)
T 2g0u_A 30 KDLNKQLQDAQANLTKNPSDP---TALANYQMIMSEYN 64 (92)
T ss_dssp HHHHHHHHHHHHHHHHSTTCH---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCH---HHHHHHHHHHHHHH
Confidence 356677777777888999999 55555544444333
No 366
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=27.80 E-value=64 Score=34.65 Aligned_cols=53 Identities=17% Similarity=0.165 Sum_probs=38.3
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy8368 209 NLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTAR 269 (372)
Q Consensus 209 Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al 269 (372)
.++.++++.+.|+-|.. .+. .-|.++-.-|-+|.+|...|++++|..+|++|.
T Consensus 817 ~l~~~l~~~~~~~~~~~----l~~----~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa 869 (1139)
T 4fhn_B 817 ELVEKLFLFKQYNACMQ----LIG----WLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 869 (1139)
T ss_dssp HHHHHHHHHSCTTHHHH----HHH----HSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHHhhhHHHHHH----Hhh----hccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 34455566666655443 222 345666677999999999999999999999985
No 367
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=26.90 E-value=1.3e+02 Score=28.45 Aligned_cols=52 Identities=10% Similarity=0.030 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHhhccC----CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q psy8368 220 YKLTCDCASKALQFASHF----ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKL 271 (372)
Q Consensus 220 y~~Ai~~~~~aL~~~~~~----~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l 271 (372)
|+..+.+++.|+..++.. .++..-|+.-+|++|+..++|++|+...++++..
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 677788888887743221 1223347888999999999999999999998854
No 368
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=26.78 E-value=2e+02 Score=25.63 Aligned_cols=55 Identities=18% Similarity=0.236 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHh
Q psy8368 198 QLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIG 254 (372)
Q Consensus 198 ~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~ 254 (372)
.++-..+++++|+|.+..+....+++...+..+..+.+ ...+..+.||.-.|+-.
T Consensus 206 nl~iA~ATl~~NlAv~~~~~~~~~~~~~ll~~l~~il~--~~~d~EalyR~LvALGt 260 (304)
T 3ebb_A 206 NIHIALATLALNYSVCFHKDHNIEGKAQCLSLISTILE--VVQDLEATFRLLVALGT 260 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHT--TCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHh--ccCCHHHHHHHHHHHHH
Confidence 45555678999999999988877776666554444332 34578999998877643
No 369
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=26.31 E-value=1.7e+02 Score=24.29 Aligned_cols=32 Identities=16% Similarity=0.107 Sum_probs=21.4
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhhcCCCc
Q psy8368 245 FFVWGKALIGLQEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 245 ~~r~a~a~~~l~~~e~A~~~~~~al~l~p~~~ 276 (372)
+|-+|+.++..++|.+|.++|..|++..|.+.
T Consensus 17 ~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~ 48 (203)
T 3t5x_A 17 KYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS 48 (203)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH
Confidence 45567777777777777777777777666543
No 370
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=25.98 E-value=1.6e+02 Score=27.73 Aligned_cols=29 Identities=14% Similarity=0.111 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..++.-+|.+|+-+++|.+|+.+|++++.
T Consensus 190 ~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 190 YAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 45666788899999999999999999986
No 371
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=25.94 E-value=1.6e+02 Score=28.13 Aligned_cols=29 Identities=17% Similarity=0.046 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..++.-+|.+|+-+++|.+|+.+|++++.
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~ 231 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLA 231 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 45666788889999999999999999986
No 372
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=25.56 E-value=1.4e+02 Score=28.60 Aligned_cols=52 Identities=12% Similarity=0.144 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHhhccC-------CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q psy8368 220 YKLTCDCASKALQFASHF-------ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKL 271 (372)
Q Consensus 220 y~~Ai~~~~~aL~~~~~~-------~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l 271 (372)
|+..+.+++.|+..++.. .++..-|+.-+|++|+..++|++|+...++++..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 566777888887644211 1223347788999999999999999999999875
No 373
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=24.74 E-value=1.3e+02 Score=28.41 Aligned_cols=52 Identities=12% Similarity=0.041 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHhhccC----CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q psy8368 220 YKLTCDCASKALQFASHF----ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKL 271 (372)
Q Consensus 220 y~~Ai~~~~~aL~~~~~~----~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l 271 (372)
|+..+.+++.|+..++.. .++..-|+.-+|++|+-.++|++|+...++++..
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 577788888888744321 1223347788899999999999999999988764
No 374
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=24.46 E-value=3.1e+02 Score=25.90 Aligned_cols=51 Identities=10% Similarity=-0.042 Sum_probs=34.5
Q ss_pred HH-HHHHHHHHHHHh-hcc----CCCCchhHHHHHHHHHHhcC---------CHHHHHHHHHHHHh
Q psy8368 220 YK-LTCDCASKALQF-ASH----FATKDVKLFFVWGKALIGLQ---------EWTSAIKHLKTARK 270 (372)
Q Consensus 220 y~-~Ai~~~~~aL~~-~~~----~~p~~~ka~~r~a~a~~~l~---------~~e~A~~~~~~al~ 270 (372)
|+ ..+.+++.|+.. ++. -..+..-|+.-+|++|+..+ +|++|+...++++.
T Consensus 160 y~~~I~~DL~~A~~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~~~~~~~~~~A~~~a~~vi~ 225 (482)
T 3otn_A 160 YDEIIIPDLLEAEQSDLAFSDHTGRVSMGAVKALLADVYLTYAGYPLQGGKSYYAESAKRSLEVIK 225 (482)
T ss_dssp HHHTHHHHHHHHHTSCCCSCCSSSCCCHHHHHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCcCcCCcCcHHHHHHHHHHHHHHhCCCcccCcHHHHHHHHHHHHHHHc
Confidence 56 677788888763 210 01122336777888888777 89999998888875
No 375
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=24.46 E-value=1.2e+02 Score=28.64 Aligned_cols=52 Identities=19% Similarity=0.234 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHhhccC---------CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhh
Q psy8368 220 YKLTCDCASKALQFASHF---------ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKL 271 (372)
Q Consensus 220 y~~Ai~~~~~aL~~~~~~---------~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l 271 (372)
|+..+.+++.|+..++.. .++..-|+.-+|++|+..++|++|+...++++..
T Consensus 160 y~~I~~DL~~A~~~L~~~~~~~~~~~gr~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 160 YQQIFDDLNLAQDYLTNYVRKGDGQKFKPNTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHHTTTCCCCSGGGTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcccccCCccccCcccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 667777888887644221 1223347888999999999999999999999864
No 376
>3umh_A Amyloid beta A4 protein; metal binding site, metal binding, cell surface, secretory P metal binding protein; 2.00A {Homo sapiens} SCOP: a.47.4.1 PDB: 3umi_A 3umk_A 1rw6_A 3nyl_A 3nyj_A 1tkn_A
Probab=23.16 E-value=3.3e+02 Score=22.79 Aligned_cols=68 Identities=16% Similarity=0.169 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhc--CCHHHHHHHHHHHHhhcCCCc
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGL--QEWTSAIKHLKTARKLAAKDS 276 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l--~~~e~A~~~~~~al~l~p~~~ 276 (372)
...+.-+..+.+ ..+-..|+..|..||. .+|.++.-.+..-+.|..- ++-.=.+..|+.+...+|..+
T Consensus 86 ~etH~qRV~a~l-n~rrr~Ale~y~~ALq----~~pp~~~~il~aLk~yirae~KDR~Hti~hy~Hv~~~dpe~A 155 (211)
T 3umh_A 86 VETHMARVEAML-NDRRRLALENYITALQ----AVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKA 155 (211)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHHT----CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHh----cCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCHHHH
Confidence 444554444444 3456789999999997 7777766555555555433 233336888999999898654
No 377
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=22.73 E-value=1.9e+02 Score=27.23 Aligned_cols=29 Identities=17% Similarity=0.170 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..++.-+|.+|+-+++|.+|+.+|++++.
T Consensus 196 ~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 196 WAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 45666778888889999999999999986
No 378
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=22.47 E-value=1.6e+02 Score=27.84 Aligned_cols=53 Identities=13% Similarity=0.036 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHhhccC----CCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhc
Q psy8368 220 YKLTCDCASKALQFASHF----ATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLA 272 (372)
Q Consensus 220 y~~Ai~~~~~aL~~~~~~----~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~ 272 (372)
|+..+.+++.|+..++.. .++..-|+.-+|++|+-.++|++|+...++++...
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 677888888888743211 12233478889999999999999999999998653
No 379
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=22.43 E-value=1.9e+02 Score=27.29 Aligned_cols=29 Identities=17% Similarity=0.043 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..++.-+|.+|+-+++|.+|+.++++++.
T Consensus 191 ~aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 191 DVVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 35666788899999999999999999985
No 380
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=21.14 E-value=3.8e+02 Score=22.68 Aligned_cols=64 Identities=13% Similarity=0.149 Sum_probs=42.7
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCC
Q psy8368 207 YRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQEWTSAIKHLKTARKLAAK 274 (372)
Q Consensus 207 ~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~~~e~A~~~~~~al~l~p~ 274 (372)
|.++-.-|.... ..+...|..... ..+.-..+.-|-..|..+...|+|.+|...|+.+++-...
T Consensus 119 yLklWl~Ya~~~--~~p~~if~~L~~--~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 119 YLRIWMQYVNYI--DEPVELFSFLAH--HHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp HHHHHHHHHTTC--SCHHHHHHHHHH--TTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCB
T ss_pred HHHHHHHHHHcc--CCHHHHHHHHHH--CCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 444445555443 355555555543 0144556666667888899999999999999999987543
No 381
>2lj4_A Peptidyl-prolyl CIS-trans isomerase/rotamase, PUT; tbpin1; NMR {Trypanosoma brucei}
Probab=20.98 E-value=36 Score=25.60 Aligned_cols=22 Identities=27% Similarity=0.454 Sum_probs=19.4
Q ss_pred CCccchHHHHHhccCCCCcEEE
Q psy8368 67 SSGLIPAFEYAILSMQKGEKSD 88 (372)
Q Consensus 67 ~~~~~~~le~~l~~m~~Ge~~~ 88 (372)
.+.+.+.|+.++..|++|+...
T Consensus 79 ~~~~~~~f~~a~~~l~~GeiS~ 100 (115)
T 2lj4_A 79 SGEMMKPFEDAVRALKIGDISP 100 (115)
T ss_dssp TTSSCHHHHHHHTTSCBTCBCC
T ss_pred CCCCCchHHHHHhcCCCCCCCC
Confidence 3488999999999999999875
No 382
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=20.94 E-value=3.2e+02 Score=21.79 Aligned_cols=77 Identities=9% Similarity=-0.073 Sum_probs=52.0
Q ss_pred HHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHH-HHHHHHHHHccCHHHHHHHHHHHHHhh
Q psy8368 156 QELGASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVY-RNLMVCYNNNKQYKLTCDCASKALQFA 234 (372)
Q Consensus 156 ~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~-~Nla~~~~kl~~y~~Ai~~~~~aL~~~ 234 (372)
..-...|-.+|..|+|-+|-+.+..+-...+. +++ + ..-++..+. .-.|..+.+.|++.-|...+.+++..+
T Consensus 33 ~~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~---~~~-e---r~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L 105 (161)
T 2ijq_A 33 RRAVVHGVRLYNSGEFHESHDCFEDEWYNYGR---GNT-E---SKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYF 105 (161)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCS---SSH-H---HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCchHHHHHHHHHHHhcCC---Cch-H---HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 33466788899999999999998877654321 111 1 122223344 456667778899999999999999865
Q ss_pred ccCCC
Q psy8368 235 SHFAT 239 (372)
Q Consensus 235 ~~~~p 239 (372)
....+
T Consensus 106 ~~~~~ 110 (161)
T 2ijq_A 106 RGVPN 110 (161)
T ss_dssp TTSCT
T ss_pred HhCCC
Confidence 44433
No 383
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=20.85 E-value=1.9e+02 Score=27.34 Aligned_cols=29 Identities=21% Similarity=0.256 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy8368 204 CRVYRNLMVCYNNNKQYKLTCDCASKALQ 232 (372)
Q Consensus 204 ~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~ 232 (372)
..++.-+|.+|+-+++|.+|+.+|++++.
T Consensus 202 ~aa~allarvyL~~~~~~~A~~~a~~vi~ 230 (477)
T 3mcx_A 202 WAAQALLSRVYLNMGEYQKAYDAATDVIK 230 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 45666788899999999999999999996
No 384
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=20.56 E-value=2.4e+02 Score=20.17 Aligned_cols=69 Identities=3% Similarity=-0.211 Sum_probs=45.8
Q ss_pred HhhHHHHhccCHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhccCCC
Q psy8368 160 ASGKNAFNDKNIVSAVRRYRDAVKLLINTQVTNYEDQMQLEEYLCRVYRNLMVCYNNNKQYKLTCDCASKALQFASHFAT 239 (372)
Q Consensus 160 ~~Gn~~~~~g~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~l~~~l~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p 239 (372)
..|..+|..|+|-+|-+.+...-...+. .+..-++..+..-.|..+.+.|++ |...+.+++..+....|
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~~~---------~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~~L~~~~~ 74 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKATG---------EERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEARLEGLPC 74 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCH---------HHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhCCC---------chHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHHhCCC
Confidence 4678889999999999998887765421 111222233444455566677887 99999999876554443
No 385
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=20.52 E-value=2.4e+02 Score=26.42 Aligned_cols=97 Identities=12% Similarity=0.105 Sum_probs=58.6
Q ss_pred HHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhh----c-cCCCh---------H--H---HHH---------HHHHHHHH
Q psy8368 155 AQELGASGKNAFNDKNIVSAVRRYRDAVKLLIN----T-QVTNY---------E--D---QMQ---------LEEYLCRV 206 (372)
Q Consensus 155 ~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~----~-~~~~~---------~--~---~~~---------~~~l~~~l 206 (372)
...+...++.+...++|.+|..++..+..+.-. . ..+|+ . + ... -...+..+
T Consensus 11 ~~wl~~La~~h~~~~n~~EAa~cl~~~aaliae~L~~~~~~~~~~~~f~~i~p~~~ee~~~~~d~g~~~~~fte~~l~~l 90 (428)
T 2wm9_A 11 KTWLDSMARIHVKNGDLSEAAMCYVHVTALVAEYLTRKGVFRQGCTAFRVITPNIDEEASMMEDVGMQDVHFNEDVLMEL 90 (428)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHTTSSSCCGGGGTTTCGGGGGGC---------CCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhcCCCccchhccccccCCCccccCHHHHHHH
Confidence 456677888999999999999998744432111 0 00000 0 0 000 11222345
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhhccCCCCchhHHHHHHHHHHhcC
Q psy8368 207 YRNLMVCYNNNKQYKLTCDCASKALQFASHFATKDVKLFFVWGKALIGLQ 256 (372)
Q Consensus 207 ~~Nla~~~~kl~~y~~Ai~~~~~aL~~~~~~~p~~~ka~~r~a~a~~~l~ 256 (372)
+...+.++.+-+.|+.|+..|+.++.+++.. .-|-.++.+|..+.
T Consensus 91 l~~ai~~f~kg~~~E~ai~~~k~L~~~ye~~-----~dy~~Ls~~~~~~a 135 (428)
T 2wm9_A 91 LEQCADGLWKAERYELIADIYKLIIPIYEKR-----RDFERLAHLYDTLH 135 (428)
T ss_dssp HHHHHHHHHHTTCGGGHHHHHTTTHHHHHHT-----TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHh-----cCHHHHHHHHHHHH
Confidence 6666667778888999999999988755432 34556777776654
No 386
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=20.34 E-value=3e+02 Score=21.14 Aligned_cols=34 Identities=15% Similarity=0.189 Sum_probs=29.6
Q ss_pred HHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhh
Q psy8368 152 LKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLL 185 (372)
Q Consensus 152 ~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~ 185 (372)
++.+..+.++|..++.+|+..+|-+.|-+|....
T Consensus 4 l~lAe~yL~EA~ell~kGD~vQAsEK~ykAaeea 37 (129)
T 2jpu_A 4 STSAEVYYEEAEEFLSKGDLVQACEKYYKAAEEA 37 (129)
T ss_dssp SCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 3568899999999999999999999998888654
No 387
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=20.26 E-value=22 Score=33.81 Aligned_cols=38 Identities=21% Similarity=0.339 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhHHHHhccCHHHHHHHHHHHHHhhhhc
Q psy8368 151 VLKRAQELGASGKNAFNDKNIVSAVRRYRDAVKLLINT 188 (372)
Q Consensus 151 ~~~~~~~~k~~Gn~~~~~g~~~~A~~~y~~al~~~~~~ 188 (372)
.++.|..+-.+|..+=+.|+|.+|+.+|..|++++-..
T Consensus 7 ~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~~ 44 (444)
T 2zan_A 7 NLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHV 44 (444)
T ss_dssp --------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 35677888888888899999999999999999988553
Done!