BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8371
(528 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1KF0|A Chain A, Crystal Structure Of Pig Muscle Phosphoglycerate Kinase
Ternary Complex With Amp-Pcp And 3pg
Length = 416
Score = 541 bits (1394), Expect = e-154, Method: Compositional matrix adjust.
Identities = 273/403 (67%), Positives = 318/403 (78%), Gaps = 11/403 (2%)
Query: 4 NKLSVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSHL 53
NKL++D LN+ GKRV+MRVDFNVPMK +AA+ +IK+ LD GAKSVVLMSHL
Sbjct: 4 NKLTLDKLNVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDDGAKSVVLMSHL 63
Query: 54 GRPDGSKNL-KYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRF 112
GRPDGS KYSL+PVA ELK+LL KD+ FL DCVGP+VE+ACADP AGS+ILLENLRF
Sbjct: 64 GRPDGSPMPDKYSLQPVAVELKSLLGKDVLFLKDCVGPEVEKACADPAAGSVILLENLRF 123
Query: 113 YVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQR 172
+VEEEGKG +A+G KVKA +K FR SL KLGD+YVNDAFGTAHRAHSSM+G ++
Sbjct: 124 HVEEEGKGKDASGNKVKAEPAKIKTFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPKK 183
Query: 173 ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232
A GFL+KKEL+YF+KAL++PE+PFLAILGGAKVADKIQLI N+LDKVNEMIIGGGM++TF
Sbjct: 184 AGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTF 243
Query: 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVE 292
LK L M IG SL+D EGAKIVK L+ KAEKN VK+ PVDF+TADKF E AKTG+ATV
Sbjct: 244 LKVLNNMEIGTSLFDEEGAKIVKNLMSKAEKNGVKITLPVDFVTADKFDEHAKTGQATVA 303
Query: 293 SGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXX 352
SG+P GWMGLD GP+S + + E +ARAK IVWNGP GVFE+E FA+GTK +MD VV
Sbjct: 304 SGIPAGWMGLDCGPESSKKYSEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATS 363
Query: 353 XXXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGKI 395
KWNTEDKVSHVSTGGGASLELLEGK+
Sbjct: 364 RGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKV 406
>pdb|1VJC|A Chain A, Structure Of Pig Muscle Pgk Complexed With Mgatp
pdb|1VJD|A Chain A, Structure Of Pig Muscle Pgk Complexed With Atp
Length = 416
Score = 535 bits (1378), Expect = e-152, Method: Compositional matrix adjust.
Identities = 269/403 (66%), Positives = 318/403 (78%), Gaps = 11/403 (2%)
Query: 4 NKLSVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSHL 53
NKL++D L++ GKRV+MRVDFNVPMK +AA+ +IK+ LD GAKSVVLMSHL
Sbjct: 4 NKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAIPSIKFCLDNGAKSVVLMSHL 63
Query: 54 GRPDG-SKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRF 112
GRPDG KYSL+PVA ELK+LL KD+ FL DCVGP+VE+ACADP AGS+ILLENLRF
Sbjct: 64 GRPDGIPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACADPAAGSVILLENLRF 123
Query: 113 YVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQR 172
+VEEEGKG +A+G KVKA ++ FR SL KLGD+YVNDAFGTAHRAHSSM+G ++
Sbjct: 124 HVEEEGKGKDASGSKVKADPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPKK 183
Query: 173 ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232
A GFL+KKEL+YF+KAL++PE+PFLAILGGAKVADKIQLI N+LDKVNEMIIGGGM++TF
Sbjct: 184 AGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTF 243
Query: 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVE 292
LK L M IG SL+D EG+KIVK L+ KAEKN VK+ PVDF+TADKF E+AKTG+ATV
Sbjct: 244 LKVLNNMEIGTSLFDEEGSKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVA 303
Query: 293 SGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXX 352
SG+P GWMGLD GP+S + + E +ARAK IVWNGP GVFE+E FA+GTK +MD VV
Sbjct: 304 SGIPAGWMGLDCGPESSKKYSEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATS 363
Query: 353 XXXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGKI 395
KWNTEDKVSHVSTGGGASLELLEGK+
Sbjct: 364 RGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKV 406
>pdb|2ZGV|A Chain A, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To D-Adp
pdb|3C39|A Chain A, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To 3-Phosphoglycerate
pdb|3C39|B Chain B, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To 3-Phosphoglycerate
pdb|3C3A|A Chain A, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To 3-Phosphoglycerate And L-Adp
pdb|3C3A|B Chain B, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To 3-Phosphoglycerate And L-Adp
pdb|3C3B|A Chain A, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To D-Cdp
pdb|3C3B|B Chain B, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To D-Cdp
pdb|3C3C|A Chain A, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To 3-Phosphoglycerate And L-Cdp
pdb|3C3C|B Chain B, Crystal Structure Of Human Phosphoglycerate Kinase Bound
To 3-Phosphoglycerate And L-Cdp
Length = 420
Score = 535 bits (1377), Expect = e-152, Method: Compositional matrix adjust.
Identities = 269/403 (66%), Positives = 317/403 (78%), Gaps = 11/403 (2%)
Query: 4 NKLSVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSHL 53
NKL++D L++ GKRV+MRVDFNVPMK +AA+ +IK+ LD GAKSVVLMSHL
Sbjct: 8 NKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHL 67
Query: 54 GRPDGSKNL-KYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRF 112
GRPDG KYSL+PVA ELK+LL KD+ FL DCVGP+VE+ACA+P AGS+ILLENLRF
Sbjct: 68 GRPDGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRF 127
Query: 113 YVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQR 172
+VEEEGKG +A+G KVKA ++ FR SL KLGD+YVNDAFGTAHRAHSSM+G Q+
Sbjct: 128 HVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPQK 187
Query: 173 ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232
A GFL+KKEL+YF+KAL++PE+PFLAILGGAKVADKIQLI N+LDKVNEMIIGGGM++TF
Sbjct: 188 AGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTF 247
Query: 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVE 292
LK L M IG SL+D EGAKIVK L+ KAEKN VK+ PVDF+TADKF E+AKTG+ATV
Sbjct: 248 LKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVA 307
Query: 293 SGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXX 352
SG+P GWMGLD GP+S + + E + RAK IVWNGP GVFE+E FA+GTK +MD VV
Sbjct: 308 SGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATS 367
Query: 353 XXXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGKI 395
KWNTEDKVSHVSTGGGASLELLEGK+
Sbjct: 368 RGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKV 410
>pdb|2XE6|A Chain A, The Complete Reaction Cycle Of Human Phosphoglycerate
Kinase: The Open Binary Complex With 3pg
pdb|2XE7|A Chain A, The Complete Reaction Cycle Of Human Phosphoglycerate
Kinase: The Open Ternary Complex With 3pg And Adp
pdb|2XE8|A Chain A, The Complete Reaction Cycle Of Human Phosphoglycerate
Kinase: The Open Ternary Complex With 3pg And Amp-Pnp
pdb|2YBE|A Chain A, The Structure Of The Fully Closed Conformation Of Human
Pgk In Complex With L-Adp, 3pg And The Tsa Aluminium
Tetrafluoride At 2.0 A Resolution
Length = 417
Score = 535 bits (1377), Expect = e-152, Method: Compositional matrix adjust.
Identities = 269/403 (66%), Positives = 317/403 (78%), Gaps = 11/403 (2%)
Query: 4 NKLSVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSHL 53
NKL++D L++ GKRV+MRVDFNVPMK +AA+ +IK+ LD GAKSVVLMSHL
Sbjct: 5 NKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHL 64
Query: 54 GRPDGSKNL-KYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRF 112
GRPDG KYSL+PVA ELK+LL KD+ FL DCVGP+VE+ACA+P AGS+ILLENLRF
Sbjct: 65 GRPDGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRF 124
Query: 113 YVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQR 172
+VEEEGKG +A+G KVKA ++ FR SL KLGD+YVNDAFGTAHRAHSSM+G Q+
Sbjct: 125 HVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPQK 184
Query: 173 ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232
A GFL+KKEL+YF+KAL++PE+PFLAILGGAKVADKIQLI N+LDKVNEMIIGGGM++TF
Sbjct: 185 AGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTF 244
Query: 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVE 292
LK L M IG SL+D EGAKIVK L+ KAEKN VK+ PVDF+TADKF E+AKTG+ATV
Sbjct: 245 LKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVA 304
Query: 293 SGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXX 352
SG+P GWMGLD GP+S + + E + RAK IVWNGP GVFE+E FA+GTK +MD VV
Sbjct: 305 SGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATS 364
Query: 353 XXXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGKI 395
KWNTEDKVSHVSTGGGASLELLEGK+
Sbjct: 365 RGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKV 407
>pdb|2Y3I|A Chain A, The Structure Of The Fully Closed Conformation Of Human
Pgk In Complex With L-Adp, 3pg And The Tsa Aluminium
Tetrafluoride
pdb|2Y3I|D Chain D, The Structure Of The Fully Closed Conformation Of Human
Pgk In Complex With L-Adp, 3pg And The Tsa Aluminium
Tetrafluoride
Length = 416
Score = 535 bits (1377), Expect = e-152, Method: Compositional matrix adjust.
Identities = 269/403 (66%), Positives = 317/403 (78%), Gaps = 11/403 (2%)
Query: 4 NKLSVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSHL 53
NKL++D L++ GKRV+MRVDFNVPMK +AA+ +IK+ LD GAKSVVLMSHL
Sbjct: 5 NKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHL 64
Query: 54 GRPDGSKNL-KYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRF 112
GRPDG KYSL+PVA ELK+LL KD+ FL DCVGP+VE+ACA+P AGS+ILLENLRF
Sbjct: 65 GRPDGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRF 124
Query: 113 YVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQR 172
+VEEEGKG +A+G KVKA ++ FR SL KLGD+YVNDAFGTAHRAHSSM+G Q+
Sbjct: 125 HVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPQK 184
Query: 173 ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232
A GFL+KKEL+YF+KAL++PE+PFLAILGGAKVADKIQLI N+LDKVNEMIIGGGM++TF
Sbjct: 185 AGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTF 244
Query: 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVE 292
LK L M IG SL+D EGAKIVK L+ KAEKN VK+ PVDF+TADKF E+AKTG+ATV
Sbjct: 245 LKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVA 304
Query: 293 SGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXX 352
SG+P GWMGLD GP+S + + E + RAK IVWNGP GVFE+E FA+GTK +MD VV
Sbjct: 305 SGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATS 364
Query: 353 XXXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGKI 395
KWNTEDKVSHVSTGGGASLELLEGK+
Sbjct: 365 RGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKV 407
>pdb|2WZB|A Chain A, The Catalytically Active Fully Closed Conformation Of
Human Phosphoglycerate Kinase In Complex With Adp, 3pg
And Magnesium Trifluoride
pdb|2WZC|A Chain A, The Catalytically Active Fully Closed Conformation Of
Human Phosphoglycerate Kinase In Complex With Adp, 3pg
And Aluminium Tetrafluoride
pdb|2X13|A Chain A, The Catalytically Active Fully Closed Conformation Of
Human Phosphoglycerate Kinase In Complex With Adp And
3phosphoglycerate
pdb|2X15|A Chain A, The Catalytically Active Fully Closed Conformation Of
Human Phosphoglycerate Kinase In Complex With Adp And
1,3- Bisphosphoglycerate
Length = 416
Score = 534 bits (1376), Expect = e-152, Method: Compositional matrix adjust.
Identities = 269/403 (66%), Positives = 317/403 (78%), Gaps = 11/403 (2%)
Query: 4 NKLSVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSHL 53
NKL++D L++ GKRV+MRVDFNVPMK +AA+ +IK+ LD GAKSVVLMSHL
Sbjct: 4 NKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHL 63
Query: 54 GRPDGSKNL-KYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRF 112
GRPDG KYSL+PVA ELK+LL KD+ FL DCVGP+VE+ACA+P AGS+ILLENLRF
Sbjct: 64 GRPDGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRF 123
Query: 113 YVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQR 172
+VEEEGKG +A+G KVKA ++ FR SL KLGD+YVNDAFGTAHRAHSSM+G Q+
Sbjct: 124 HVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPQK 183
Query: 173 ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232
A GFL+KKEL+YF+KAL++PE+PFLAILGGAKVADKIQLI N+LDKVNEMIIGGGM++TF
Sbjct: 184 AGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTF 243
Query: 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVE 292
LK L M IG SL+D EGAKIVK L+ KAEKN VK+ PVDF+TADKF E+AKTG+ATV
Sbjct: 244 LKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVA 303
Query: 293 SGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXX 352
SG+P GWMGLD GP+S + + E + RAK IVWNGP GVFE+E FA+GTK +MD VV
Sbjct: 304 SGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATS 363
Query: 353 XXXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGKI 395
KWNTEDKVSHVSTGGGASLELLEGK+
Sbjct: 364 RGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKV 406
>pdb|2X14|A Chain A, The Catalytically Active Fully Closed Conformation Of
Human Phosphoglycerate Kinase K219a Mutant In Complex
With Amp-Pcp And 3pg
Length = 416
Score = 533 bits (1373), Expect = e-152, Method: Compositional matrix adjust.
Identities = 268/403 (66%), Positives = 316/403 (78%), Gaps = 11/403 (2%)
Query: 4 NKLSVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSHL 53
NKL++D L++ GKRV+MRVDFNVPMK +AA+ +IK+ LD GAKSVVLMSHL
Sbjct: 4 NKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHL 63
Query: 54 GRPDGSKNL-KYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRF 112
GRPDG KYSL+PVA ELK+LL KD+ FL DCVGP+VE+ACA+P AGS+ILLENLRF
Sbjct: 64 GRPDGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRF 123
Query: 113 YVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQR 172
+VEEEGKG +A+G KVKA ++ FR SL KLGD+YVNDAFGTAHRAHSSM+G Q+
Sbjct: 124 HVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPQK 183
Query: 173 ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232
A GFL+KKEL+YF+KAL++PE+PFLAILGGAKVAD IQLI N+LDKVNEMIIGGGM++TF
Sbjct: 184 AGGFLMKKELNYFAKALESPERPFLAILGGAKVADAIQLINNMLDKVNEMIIGGGMAFTF 243
Query: 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVE 292
LK L M IG SL+D EGAKIVK L+ KAEKN VK+ PVDF+TADKF E+AKTG+ATV
Sbjct: 244 LKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVA 303
Query: 293 SGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXX 352
SG+P GWMGLD GP+S + + E + RAK IVWNGP GVFE+E FA+GTK +MD VV
Sbjct: 304 SGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATS 363
Query: 353 XXXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGKI 395
KWNTEDKVSHVSTGGGASLELLEGK+
Sbjct: 364 RGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKV 406
>pdb|2WZD|A Chain A, The Catalytically Active Fully Closed Conformation Of
Human Phosphoglycerate Kinase K219a Mutant In Complex
With Adp, 3pg And Aluminium Trifluoride
Length = 417
Score = 533 bits (1373), Expect = e-151, Method: Compositional matrix adjust.
Identities = 268/403 (66%), Positives = 316/403 (78%), Gaps = 11/403 (2%)
Query: 4 NKLSVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSHL 53
NKL++D L++ GKRV+MRVDFNVPMK +AA+ +IK+ LD GAKSVVLMSHL
Sbjct: 5 NKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHL 64
Query: 54 GRPDGSKNL-KYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRF 112
GRPDG KYSL+PVA ELK+LL KD+ FL DCVGP+VE+ACA+P AGS+ILLENLRF
Sbjct: 65 GRPDGVPMPDKYSLEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRF 124
Query: 113 YVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQR 172
+VEEEGKG +A+G KVKA ++ FR SL KLGD+YVNDAFGTAHRAHSSM+G Q+
Sbjct: 125 HVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPQK 184
Query: 173 ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232
A GFL+KKEL+YF+KAL++PE+PFLAILGGAKVAD IQLI N+LDKVNEMIIGGGM++TF
Sbjct: 185 AGGFLMKKELNYFAKALESPERPFLAILGGAKVADAIQLINNMLDKVNEMIIGGGMAFTF 244
Query: 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVE 292
LK L M IG SL+D EGAKIVK L+ KAEKN VK+ PVDF+TADKF E+AKTG+ATV
Sbjct: 245 LKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVA 304
Query: 293 SGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXX 352
SG+P GWMGLD GP+S + + E + RAK IVWNGP GVFE+E FA+GTK +MD VV
Sbjct: 305 SGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATS 364
Query: 353 XXXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGKI 395
KWNTEDKVSHVSTGGGASLELLEGK+
Sbjct: 365 RGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGKV 407
>pdb|2P9Q|A Chain A, Crystal Structure Of Phosphoglycerate Kinase-2
pdb|2P9Q|B Chain B, Crystal Structure Of Phosphoglycerate Kinase-2
pdb|2P9T|A Chain A, Crystal Structure Of Phosphoglycerate Kinase-2 Bound To 3-
Phosphoglycerate
pdb|2PAA|A Chain A, Crystal Structure Of Phosphoglycerate Kinase-2 Bound To
Atp And 3pg
pdb|2PAA|B Chain B, Crystal Structure Of Phosphoglycerate Kinase-2 Bound To
Atp And 3pg
Length = 416
Score = 531 bits (1367), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/402 (66%), Positives = 319/402 (79%), Gaps = 11/402 (2%)
Query: 5 KLSVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSHLG 54
KL++D ++L GKRV+MRVDFNVPMK +AA+ +IK+ LD GAKSVVLMSHLG
Sbjct: 5 KLTLDKVDLKGKRVIMRVDFNVPMKNNQITNNQRIKAAIPSIKHCLDNGAKSVVLMSHLG 64
Query: 55 RPDG-SKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFY 113
RPDG KYSL+PVA+ELK+LL KD+ FL DCVGP+VE+ACA+P GSIILLENLRF+
Sbjct: 65 RPDGIPMPDKYSLEPVADELKSLLNKDVIFLKDCVGPEVEQACANPDNGSIILLENLRFH 124
Query: 114 VEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQRA 173
VEEEGKG +++G+K+ A V+ FR SL KLGD+YVNDAFGTAHRAHSSM+G Q+A
Sbjct: 125 VEEEGKGKDSSGKKISADPAKVEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPQKA 184
Query: 174 SGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFL 233
SGFL+KKELDYFSKAL+ PE+PFLAILGGAKV DKIQLI+N+LDKVN MIIGGGM+YTFL
Sbjct: 185 SGFLMKKELDYFSKALEKPERPFLAILGGAKVKDKIQLIKNMLDKVNFMIIGGGMAYTFL 244
Query: 234 KELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVES 293
KELK M IG SL+D EGA IVK+++EKAEKN VK+ FPVDF+T DKF E+AK G+AT+ES
Sbjct: 245 KELKNMQIGASLFDEEGATIVKEIMEKAEKNGVKIVFPVDFVTGDKFDENAKVGQATIES 304
Query: 294 GVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXXX 353
G+P GWMGLD GP+S ++ + +A+AK+IVWNGP GVFE++ FAKGTK +MD VV
Sbjct: 305 GIPSGWMGLDCGPESIKINAQIVAQAKLIVWNGPIGVFEWDAFAKGTKALMDEVVKATSN 364
Query: 354 XXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGKI 395
KW TEDKVSHVSTGGGASLELLEGKI
Sbjct: 365 GCVTIIGGGDTATCCAKWGTEDKVSHVSTGGGASLELLEGKI 406
>pdb|1HDI|A Chain A, Pig Muscle 3-Phosphoglycerate Kinase Complexed With 3-Pg
And Mgadp
Length = 413
Score = 512 bits (1319), Expect = e-145, Method: Compositional matrix adjust.
Identities = 258/403 (64%), Positives = 300/403 (74%), Gaps = 11/403 (2%)
Query: 4 NKLSVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSHL 53
NKL++D LN+ GKRV+MRVDFNVPM +AA+ +IK+ LD GAKSVVLMSHL
Sbjct: 1 NKLTLDKLNVKGKRVVMRVDFNVPMAAAQITNNARIKAAVPSIKFCLDDGAKSVVLMSHL 60
Query: 54 GRPDGSKNL-KYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRF 112
GRPDGS KYSL+PVA ELK+ L K + FL DCVGP VE+ACADP AGS+ILLENLRF
Sbjct: 61 GRPDGSPMPDKYSLQPVAAELKSALGKAVLFLKDCVGPAVEKACADPAAGSVILLENLRF 120
Query: 113 YVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQR 172
+VEEEGKG +A+G K +K FR SL LGD+YVNDAFGTAHRAHSSM+G ++
Sbjct: 121 HVEEEGKGKDASGNKAAGEPAKIKAFRASLSALGDVYVNDAFGTAHRAHSSMVGVNLPKK 180
Query: 173 ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232
A FL+KKEL+YF+ A ++PE+PFLAILGGAKVADKIQLI N+LDKVNEMIIGGGM++TF
Sbjct: 181 AGAFLMKKELNYFAAAAESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTF 240
Query: 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVE 292
LK L M IG SL+D G KIVK L+ KA N VK+ PVDF+TADKF E AK G+ATV
Sbjct: 241 LKVLNNMEIGTSLFDEAGKKIVKNLMSKAAANGVKITLPVDFVTADKFDEQAKIGQATVA 300
Query: 293 SGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXX 352
SG+P GWMGLD GPKS + E +ARAK IVWNGP GVFE+E FA+GTK +MD VV
Sbjct: 301 SGIPAGWMGLDCGPKSSAKYSEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATS 360
Query: 353 XXXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGKI 395
KWNTED VSHVSTGGGASLELLEGK+
Sbjct: 361 RGCITIIGGGDTATCCAKWNTEDNVSHVSTGGGASLELLEGKV 403
>pdb|1QPG|A Chain A, 3-Phosphoglycerate Kinase, Mutation R65q
Length = 415
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/401 (58%), Positives = 287/401 (71%), Gaps = 11/401 (2%)
Query: 4 NKLSVDLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHL 53
+KLSV L+L KRV +RVDFNVP+ AAL TIKY L+ + VVL SHL
Sbjct: 4 SKLSVQDLDLKDKRVFIRVDFNVPLDGKKITSNQRIVAALPTIKYVLEHHPRYVVLASHL 63
Query: 54 GRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFY 113
G+P+G +N KYSL PVA+EL++LL KD+TFL+DCVGP+VE A GS+ILLENLR++
Sbjct: 64 GQPNGERNEKYSLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYH 123
Query: 114 VEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQRA 173
+EEEG G+KVKAS EDV+KFR L L D+Y+NDAFGTAHRAHSSM+G QRA
Sbjct: 124 IEEEGSR-KVDGQKVKASKEDVQKFRHELSSLADVYINDAFGTAHRAHSSMVGFDLPQRA 182
Query: 174 SGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFL 233
+GFLL+KEL YF KAL+NP +PFLAILGGAKVADKIQLI+NLLDKV+ +IIGGGM++TF
Sbjct: 183 AGFLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTFK 242
Query: 234 KELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVES 293
K L+ IG S++D GA+IV KL+EKA+ V++ PVDFI AD F+ DA T T +
Sbjct: 243 KVLENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDKE 302
Query: 294 GVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXXX 353
G+P GW GLD GP+SR+LF +A+AK IVWNGP GVFEFE FA GTK ++D VV
Sbjct: 303 GIPAGWQGLDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAA 362
Query: 354 XXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGK 394
K+ DK+SHVSTGGGASLELLEGK
Sbjct: 363 GNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELLEGK 403
>pdb|3PGK|A Chain A, The Structure Of Yeast Phosphoglycerate Kinase At 0.25 Nm
Resolution
Length = 416
Score = 443 bits (1140), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/401 (57%), Positives = 282/401 (70%), Gaps = 11/401 (2%)
Query: 4 NKLSVDLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHL 53
+KLSV L+L KRV +RVDFNVP+ AAL TIKY L+ + VVL SHL
Sbjct: 5 SKLSVQDLDLKDKRVFIRVDFNVPLDGKKITSNQRIVAALPTIKYVLEHHPRYVVLASHL 64
Query: 54 GRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFY 113
GRP+G +N KYSL PVA+EL++LL KD+TFL+DCVGP+VE A GS+ILLENLR++
Sbjct: 65 GRPNGERNEKYSLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYH 124
Query: 114 VEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQRA 173
+EEEG G+KVKAS EDV+KFR L L D+Y+NDAFGTAHRAHSSM+G QRA
Sbjct: 125 IEEEGSR-KVDGQKVKASKEDVQKFRHELSSLADVYINDAFGTAHRAHSSMVGFDLPQRA 183
Query: 174 SGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFL 233
+GFLL+KEL YF KAL+NP +PFLAILGGAKVADKIQLI+NLLDKV+ +IIGGGM++TF
Sbjct: 184 AGFLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTFK 243
Query: 234 KELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVES 293
K L+ IG S++D + KL+EKA+ V++ PVDFI AD F+ A T T +
Sbjct: 244 KVLENTEIGDSIFDKAVGPEIAKLMEKAKAKGVEVVLPVDFIIADAFSASANTKTVTDKE 303
Query: 294 GVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXXX 353
G+P GW GLD GP+SR+LF +A+A VI+WNGP GVFEFE FA GTK ++D VV
Sbjct: 304 GIPAGWQGLDNGPESRKLFAATVAKATVILWNGPPGVFEFEKFAAGTKALLDEVVKSSAA 363
Query: 354 XXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGK 394
K+ DK+SHVSTGGGASLELLEGK
Sbjct: 364 GNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELLEGK 404
>pdb|3OZ7|A Chain A, Crystal Structure Of 3-Phosphopglycerate Kinase Of
Plasmodium Falciparum
pdb|3OZ7|B Chain B, Crystal Structure Of 3-Phosphopglycerate Kinase Of
Plasmodium Falciparum
Length = 417
Score = 439 bits (1130), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/402 (55%), Positives = 289/402 (71%), Gaps = 11/402 (2%)
Query: 4 NKLSV-DLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSH 52
NKLS+ DL ++ K+VL+RVDFNVP++ A L TI + +GA ++L+SH
Sbjct: 6 NKLSISDLKDIKNKKVLVRVDFNVPIENGIIKDTNRITATLPTINHLKKEGASKIILISH 65
Query: 53 LGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRF 112
GRPDG +N KY+LKPVAE LK LL +++ FL+DCVG +VE+ S+ILLENLRF
Sbjct: 66 CGRPDGLRNEKYTLKPVAETLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILLENLRF 125
Query: 113 YVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQR 172
++EEEGKGV+A G KVKA+ EDV+KF+ L KL D+++NDAFGTAHRAHSSM+G +
Sbjct: 126 HIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLADVFINDAFGTAHRAHSSMVGVKLNVK 185
Query: 173 ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232
ASGFL+KKEL+YFSKAL+NP++P LAILGGAKV+DKIQLI+NLLDKV+ MIIGGGM+YTF
Sbjct: 186 ASGFLMKKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRMIIGGGMAYTF 245
Query: 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVE 292
K L M IG SL+D G+KIV +++EKA+ NV++ PVDF AD F +A T T E
Sbjct: 246 KKVLNNMKIGTSLFDEAGSKIVGEIMEKAKAKNVQIFLPVDFKIADNFDNNANTKFVTDE 305
Query: 293 SGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXX 352
G+PD WMGLD GPKS E +K+ I +K ++WNGP GVFE NFAKG+ ++ VV+V
Sbjct: 306 EGIPDNWMGLDAGPKSIENYKDVILTSKTVIWNGPQGVFEMPNFAKGSIECLNLVVEVTK 365
Query: 353 XXXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGK 394
+ N ++++SHVSTGGGASLELLEGK
Sbjct: 366 KGAITIVGGGDTASLVEQQNKKNEISHVSTGGGASLELLEGK 407
>pdb|3OZA|A Chain A, Crystal Structure Of Plasmodium Falciparum
3-Phosphoglycerate Kinase
pdb|3OZA|B Chain B, Crystal Structure Of Plasmodium Falciparum
3-Phosphoglycerate Kinase
pdb|3OZA|C Chain C, Crystal Structure Of Plasmodium Falciparum
3-Phosphoglycerate Kinase
Length = 424
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/402 (54%), Positives = 282/402 (70%), Gaps = 11/402 (2%)
Query: 4 NKLSV-DLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSH 52
NKLS+ DL ++ K+VL+RVDFNVP++ A L TI + +GA ++L+SH
Sbjct: 12 NKLSISDLKDIKNKKVLVRVDFNVPIENGIIKDTNRITATLPTINHLKKEGASKIILISH 71
Query: 53 LGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRF 112
GRPDG +N KY+LKPVAE LK LL +++ FL+DCVG +VE+ S+ILLENLRF
Sbjct: 72 CGRPDGLRNEKYTLKPVAETLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILLENLRF 131
Query: 113 YVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQR 172
++EEEGKGV+A G KVKA+ EDV+KF+ L KL D+++NDAFGTAHRAHSS +G +
Sbjct: 132 HIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLADVFINDAFGTAHRAHSSXVGVKLNVK 191
Query: 173 ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232
ASGFL KKEL+YFSKAL+NP++P LAILGGAKV+DKIQLI+NLLDKV+ IIGGG +YTF
Sbjct: 192 ASGFLXKKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRXIIGGGXAYTF 251
Query: 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVE 292
K L IG SL+D G+KIV ++ EKA+ NV++ PVDF AD F +A T T E
Sbjct: 252 KKVLNNXKIGTSLFDEAGSKIVGEIXEKAKAKNVQIFLPVDFKIADNFDNNANTKFVTDE 311
Query: 293 SGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXX 352
G+PD W GLD GPKS E +K+ I +K ++WNGP GVFE NFAKG+ ++ VV+V
Sbjct: 312 EGIPDNWXGLDAGPKSIENYKDVILTSKTVIWNGPQGVFEXPNFAKGSIECLNLVVEVTK 371
Query: 353 XXXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGK 394
+ N ++++SHVSTGGGASLELLEGK
Sbjct: 372 KGAITIVGGGDTASLVEQQNKKNEISHVSTGGGASLELLEGK 413
>pdb|1LTK|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From
Plasmodium Falciparum, In The Open Conformation
pdb|1LTK|B Chain B, Crystal Structure Of Phosphoglycerate Kinase From
Plasmodium Falciparum, In The Open Conformation
pdb|1LTK|C Chain C, Crystal Structure Of Phosphoglycerate Kinase From
Plasmodium Falciparum, In The Open Conformation
Length = 425
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/402 (54%), Positives = 282/402 (70%), Gaps = 11/402 (2%)
Query: 4 NKLSV-DLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSH 52
NKLS+ DL ++ K+VL+RVDFNVP++ A L TI + +GA ++L+SH
Sbjct: 13 NKLSISDLKDIKNKKVLVRVDFNVPIENGIIKDTNRITATLPTINHLKKEGASKIILISH 72
Query: 53 LGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRF 112
GRPDG +N KY+LKPVAE LK LL +++ FL+DCVG +VE+ S+ILLENLRF
Sbjct: 73 CGRPDGLRNEKYTLKPVAETLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILLENLRF 132
Query: 113 YVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQR 172
++EEEGKGV+A G KVKA+ EDV+KF+ L KL D+++NDAFGTAHRAHSS +G +
Sbjct: 133 HIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLADVFINDAFGTAHRAHSSXVGVKLNVK 192
Query: 173 ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232
ASGFL KKEL+YFSKAL+NP++P LAILGGAKV+DKIQLI+NLLDKV+ IIGGG +YTF
Sbjct: 193 ASGFLXKKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRXIIGGGXAYTF 252
Query: 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVE 292
K L IG SL+D G+KIV ++ EKA+ NV++ PVDF AD F +A T T E
Sbjct: 253 KKVLNNXKIGTSLFDEAGSKIVGEIXEKAKAKNVQIFLPVDFKIADNFDNNANTKFVTDE 312
Query: 293 SGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXX 352
G+PD W GLD GPKS E +K+ I +K ++WNGP GVFE NFAKG+ ++ VV+V
Sbjct: 313 EGIPDNWXGLDAGPKSIENYKDVILTSKTVIWNGPQGVFEXPNFAKGSIECLNLVVEVTK 372
Query: 353 XXXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGK 394
+ N ++++SHVSTGGGASLELLEGK
Sbjct: 373 KGAITIVGGGDTASLVEQQNKKNEISHVSTGGGASLELLEGK 414
>pdb|1FW8|A Chain A, Circularly Permuted Phosphoglycerate Kinase From Yeast:
Pgk P72
Length = 416
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/332 (60%), Positives = 244/332 (73%), Gaps = 1/332 (0%)
Query: 63 KYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGKGVN 122
KYSL PVA+EL++LL KD+TFL+DCVGP+VE A GS+ILLENLR+++EEEG
Sbjct: 3 KYSLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEEEGSR-K 61
Query: 123 AAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQRASGFLLKKEL 182
G+KVKAS EDV+KFR L L D+Y+NDAFGTAHRAHSSM+G QRA+GFLL+KEL
Sbjct: 62 VDGQKVKASKEDVQKFRHELSSLADVYINDAFGTAHRAHSSMVGFDLPQRAAGFLLEKEL 121
Query: 183 DYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFLKELKGMNIG 242
YF KAL+NP +PFLAILGGAKVADKIQLI+NLLDKV+ +IIGGGM++TF K L+ IG
Sbjct: 122 KYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTFKKVLENTEIG 181
Query: 243 GSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVPDGWMGL 302
S++D GA+IV KL+EKA+ V++ PVDFI AD F+ DA T T + G+P GW GL
Sbjct: 182 DSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDKEGIPAGWQGL 241
Query: 303 DIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXXXXXXXXXXXX 362
D GP+SR+LF +A+AK IVWNGP GVFEFE FA GTK ++D VV
Sbjct: 242 DNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGG 301
Query: 363 XXXXXXXKWNTEDKVSHVSTGGGASLELLEGK 394
K+ DK+SHVSTGGGASLELLEGK
Sbjct: 302 DTATVAKKYGVTDKISHVSTGGGASLELLEGK 333
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 10/68 (14%)
Query: 4 NKLSVDLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHL 53
+KLSV L+L KRV +RVDFNVP+ AAL TIKY L+ + VVL SHL
Sbjct: 349 SKLSVQDLDLKDKRVFIRVDFNVPLDGKKITSNQRIVAALPTIKYVLEHHPRYVVLASHL 408
Query: 54 GRPDGSKN 61
GRP+G +N
Sbjct: 409 GRPNGERN 416
>pdb|1VPE|A Chain A, Crystallographic Analysis Of Phosphoglycerate Kinase From
The Hyperthermophilic Bacterium Thermotoga Maritima
Length = 398
Score = 323 bits (829), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 180/401 (44%), Positives = 256/401 (63%), Gaps = 28/401 (6%)
Query: 5 KLSVDLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHLG 54
K+++ ++L GKRV+MRVDFNVP+K+ AAL TIKYAL++GAK V+L+SHLG
Sbjct: 2 KMTIRDVDLKGKRVIMRVDFNVPVKDGVVQDDTRIRAALPTIKYALEQGAK-VILLSHLG 60
Query: 55 RPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYV 114
RP G + ++SL PVA+ L LL K++ F+ VG +V++A + G ++LLEN RF+
Sbjct: 61 RPKGEPSPEFSLAPVAKRLSELLGKEVKFVPAVVGDEVKKAVEELKEGEVLLLENTRFHP 120
Query: 115 EEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLG-EGFEQRA 173
E + ++ KF SL DI+VNDAFGTAHRAH+S +G F
Sbjct: 121 GE------------TKNDPELAKFWASL---ADIHVNDAFGTAHRAHASNVGIAQFIPSV 165
Query: 174 SGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFL 233
+GFL++KE+ + SK NPEKP++ +LGGAKV+DKI +I NL++K + ++IGG M +TFL
Sbjct: 166 AGFLMEKEIKFLSKVTYNPEKPYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFTFL 225
Query: 234 KELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVES 293
K L G +G S + + + K+LVEKA++ V++ PVD + A K + ++
Sbjct: 226 KAL-GKEVGSSRVEEDKIDLAKELVEKAKEKGVEIVLPVDAVIAQKIEPGVEKKVVRIDD 284
Query: 294 GVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXXX 353
G+P+GWMGLDIGP++ ELFK+ ++ AK +VWNGP GVFE ++FA+GTK + A+ +
Sbjct: 285 GIPEGWMGLDIGPETIELFKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTEK 344
Query: 354 XXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGK 394
K+ EDK SHVSTGGGASLE LEGK
Sbjct: 345 GAITVVGGGDSAAAVNKFGLEDKFSHVSTGGGASLEFLEGK 385
>pdb|1PHP|A Chain A, Structure Of The Adp Complex Of The 3-Phosphoglycerate
Kinase From Bacillus Stearothermophilus At 1.65
Angstroms
Length = 394
Score = 300 bits (768), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 175/403 (43%), Positives = 246/403 (61%), Gaps = 31/403 (7%)
Query: 3 LNKLSVDLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSH 52
+NK ++ +++ GKRV RVDFNVPM++ AAL TI+Y ++ GAK V+L SH
Sbjct: 1 MNKKTIRDVDVRGKRVFCRVDFNVPMEQGAITDDTRIRAALPTIRYLIEHGAK-VILASH 59
Query: 53 LGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRF 112
LGRP G + L VA+ L LL++ + ++ VG +V+ A G ++LLEN+RF
Sbjct: 60 LGRPKGKVVEELRLDAVAKRLGELLERPVAKTNEAVGDEVKAAVDRLNEGDVLLLENVRF 119
Query: 113 YVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLG-EGFEQ 171
Y EE K E K F E L D+YVNDAFG AHRAH+S G +
Sbjct: 120 YPGEE-----------KNDPELAKAFAE----LADLYVNDAFGAAHRAHASTEGIAHYLP 164
Query: 172 RASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYT 231
+GFL++KEL+ KAL NP++PF AI+GGAKV DKI +I+NLL+KV+ +IIGGG++YT
Sbjct: 165 AVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIDNLLEKVDNLIIGGGLAYT 224
Query: 232 FLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATV 291
F+K L G ++G SL + + ++ K +EKA++ V+ + PVD + AD+FA DA T +
Sbjct: 225 FVKAL-GHDVGKSLLEEDKIELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANTKVVPI 283
Query: 292 ESGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVX 351
++ +P W LDIGPK+REL+++ I +K++VWNGP GVFE + FA GTK A
Sbjct: 284 DA-IPADWSALDIGPKTRELYRDVIRESKLVVWNGPMGVFEMDAFAHGTK--AIAEALAE 340
Query: 352 XXXXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGK 394
K+ DK+ H+STGGGASLE +EGK
Sbjct: 341 ALDTYSVIGGGDSAAAVEKFGLADKMDHISTGGGASLEFMEGK 383
>pdb|3UWD|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From Bacillus
Anthracis
Length = 394
Score = 295 bits (755), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 181/402 (45%), Positives = 240/402 (59%), Gaps = 31/402 (7%)
Query: 4 NKLSVDLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHL 53
NK S+ ++L GKRV RVDFNVP KE AAL TI+Y +++GAK V+L SHL
Sbjct: 2 NKKSIRDVDLKGKRVFCRVDFNVPXKEGKITDETRIRAALPTIQYLVEQGAK-VILASHL 60
Query: 54 GRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFY 113
GRP G + L PVA L LL KD+ D+ GP +E A G +++LEN+RFY
Sbjct: 61 GRPKGQAVEELRLTPVAARLGELLGKDVKKADEAFGPVAQEXVAAXNEGDVLVLENVRFY 120
Query: 114 VEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLG-EGFEQR 172
EE K AE K+F L DI+VNDAFG AHRAH+S G +
Sbjct: 121 AGEE-----------KNDAELAKEFA----ALADIFVNDAFGAAHRAHASTAGIADYLPA 165
Query: 173 ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232
SG L +KEL+ KAL NPE+PF AI+GGAKV DKI LI +LLDKV+ +IIGGG++YTF
Sbjct: 166 VSGLLXEKELEVLGKALSNPERPFAAIIGGAKVKDKIGLIRHLLDKVDNLIIGGGLAYTF 225
Query: 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVE 292
+K L G IG SL + + ++ K+ + A++ V + PVD + ++F+E A T ++
Sbjct: 226 VKAL-GHEIGLSLCEDDKIELAKEFXQLAKEKGVNFYXPVDVVITEEFSETATTKIVGID 284
Query: 293 SGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXX 352
S +P W G+DIGPK+RE++ + I +K++VWNGP GVFE FA+GTK + A+ D
Sbjct: 285 S-IPSNWEGVDIGPKTREIYADVIKNSKLVVWNGPXGVFEXTPFAEGTKAVGQALADA-- 341
Query: 353 XXXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGK 394
K+ DK SH+STGGGASLE EGK
Sbjct: 342 EGTYSVIGGGDSAAAVEKFGXADKXSHISTGGGASLEFXEGK 383
>pdb|13PK|A Chain A, Ternary Complex Of Phosphoglycerate Kinase From
Trypanosoma Brucei
pdb|13PK|B Chain B, Ternary Complex Of Phosphoglycerate Kinase From
Trypanosoma Brucei
pdb|13PK|C Chain C, Ternary Complex Of Phosphoglycerate Kinase From
Trypanosoma Brucei
pdb|13PK|D Chain D, Ternary Complex Of Phosphoglycerate Kinase From
Trypanosoma Brucei
pdb|16PK|A Chain A, Phosphoglycerate Kinase From Trypanosoma Brucei
Bisubstrate Analog
Length = 415
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 166/420 (39%), Positives = 240/420 (57%), Gaps = 47/420 (11%)
Query: 5 KLSVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSHLG 54
K S++ +L GK+VL+RVDFNVP+K +AL T+K L +G S VLMSHLG
Sbjct: 2 KKSINECDLKGKKVLIRVDFNVPVKNGKITNDYRIRSALPTLKKVLTEGG-SCVLMSHLG 60
Query: 55 RPDGSK----------------NLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACAD 98
RP G K +LKPVA+ L LL + +TF DC+ + +
Sbjct: 61 RPKGIPMAQAGKIRSTGGVPGFQQKATLKPVAKRLSELLLRPVTFAPDCL--NAADVVSK 118
Query: 99 PPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAH 158
G ++LLEN+RFY EE K A+D + + L GD+Y++DAFGTAH
Sbjct: 119 MSPGDVVLLENVRFYKEEGSK-----------KAKDREAMAKILASYGDVYISDAFGTAH 167
Query: 159 RAHSSMLG--EGFEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLL 216
R ++M G + A+G+L++KE+ YF+K L NP +P +AI+GGAKV+DKIQL++N+L
Sbjct: 168 RDSATMTGIPKILGNGAAGYLMEKEISYFAKVLGNPPRPLVAIVGGAKVSDKIQLLDNML 227
Query: 217 DKVNEMIIGGGMSYTFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFIT 276
+++ ++IGG M+YTFLK +G +IG S + + + L++KAE V++ P+D +
Sbjct: 228 QRIDYLLIGGAMAYTFLKA-QGYSIGKSKCEESKLEFARSLLKKAEDRKVQVILPIDHVC 286
Query: 277 ADKF-AEDAKTGEATVESGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFEN 335
+F A D+ T + +P+G M LDIGPK+ E + + I + K +WNGP GVFE
Sbjct: 287 HTEFKAVDSPL--ITEDQNIPEGHMALDIGPKTIEKYVQTIGKCKSAIWNGPMGVFEMVP 344
Query: 336 FAKGTKGIMDAVVDVXXXXXXXXXXXXXXXXXXXKWNTEDK-VSHVSTGGGASLELLEGK 394
++KGT I A+ + + E K +SHVSTGGGASLELLEGK
Sbjct: 345 YSKGTFAIAKAMGRGTHEHGLMSIIGGGDSASAAELSGEAKRMSHVSTGGGASLELLEGK 404
>pdb|4DG5|A Chain A, Crystal Structure Of Staphylococcal Phosphoglycerate
Kinase
Length = 403
Score = 262 bits (669), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 161/396 (40%), Positives = 237/396 (59%), Gaps = 31/396 (7%)
Query: 11 LNLAGKRVLMRVDFNVPMKEA----------ALDTIKYALDKGAKSVVLMSHLGR-PDGS 59
L+L GK VL+R DFNVP+K+ AL TI+Y +++G K +VL SHLG+ + S
Sbjct: 16 LDLKGKTVLVRADFNVPLKDGEITNDNRIVQALPTIQYIIEQGGK-IVLFSHLGKVKEES 74
Query: 60 KNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGK 119
K +L+PVAE+L L K++ F+ + G K+E A D G ++L+EN R+
Sbjct: 75 DKAKLTLRPVAEDLSKKLDKEVVFVPETRGEKLEAAIKDLKEGDVLLVENTRYE------ 128
Query: 120 GVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFE-QRASGFLL 178
+ G+K + ++ K+ SL GD++VNDAFGTAHR H+S +G + A+GFL+
Sbjct: 129 --DLDGKKESKNDPELGKYWASL---GDVFVNDAFGTAHREHASNVGISTHLETAAGFLM 183
Query: 179 KKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFLKELKG 238
KE+ + +++P KP +AILGGAKV+DKI +I+NL++ +++IIGGGM+YTFLK +G
Sbjct: 184 DKEIKFIGGVVNDPHKPVVAILGGAKVSDKINVIKNLVNIADKIIIGGGMAYTFLKA-QG 242
Query: 239 MNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVPDG 298
IG SL + + K L+ EK+ K+ PVD A +F+ DAK +S +P
Sbjct: 243 KEIGISLLEEDKIDFAKDLL---EKHGDKIVLPVDTKVAKEFSNDAKITVVPSDS-IPAD 298
Query: 299 WMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXXXXXXXX 358
G+DIGP + +LF + + A +VWNGP GVFEF NFA+GT G+ A+ ++
Sbjct: 299 QEGMDIGPNTVKLFADELEGAHTVVWNGPMGVFEFSNFAQGTIGVCKAIANLKDAITIIG 358
Query: 359 XXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGK 394
+ E+ +H+STGGGASLE LEGK
Sbjct: 359 GGDSAAAAISLGF--ENDFTHISTGGGASLEYLEGK 392
>pdb|3Q3V|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From
Campylobacter Jejuni.
pdb|3Q3V|B Chain B, Crystal Structure Of Phosphoglycerate Kinase From
Campylobacter Jejuni
Length = 403
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 159/404 (39%), Positives = 231/404 (57%), Gaps = 37/404 (9%)
Query: 6 LSVDLLNLAGKRVLMRVDFNVPMKE-----------AALDTIKYALDKGAKSVVLMSHLG 54
+S+ ++LA K+V +R DFNVP + +A+ TI+Y LD G SV+L SHLG
Sbjct: 8 ISIKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIPTIRYCLDNGC-SVILASHLG 66
Query: 55 RPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYV 114
RP + KYSL+PVA+ L LL K+I D +G + + AG I+LLENLRF
Sbjct: 67 RPKEISS-KYSLEPVAKRLARLLDKEIVXAKDVIGEDAKTKAXNLKAGEILLLENLRFEK 125
Query: 115 EEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSM--LGEGFEQR 172
E N A E L +Y+NDAFG HRAHSS+ + + F+++
Sbjct: 126 GETKNDENLAKE---------------LASXVQVYINDAFGVCHRAHSSVEAITKFFDEK 170
Query: 173 --ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSY 230
+GFLL+KE+D+ S + +P +PF+A++GG+KV+ K+Q + NLL KV+++IIGGG ++
Sbjct: 171 HKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVSGKLQALTNLLPKVDKLIIGGGXAF 230
Query: 231 TFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEAT 290
TFLK L G +IG SL + E + K++ K + VK++ PVD + A ++D
Sbjct: 231 TFLKAL-GYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPACSQDVPXKFVP 289
Query: 291 VESGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDV 350
+ +P+GW GLDIGP S LFKE I+ A+ I WNGP GVFE + F+KG+ + +
Sbjct: 290 AQE-IPNGWXGLDIGPASVRLFKEVISDAQTIWWNGPXGVFEIDKFSKGS---IKXSHYI 345
Query: 351 XXXXXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGK 394
+ D+ + +STGGGASLEL+EGK
Sbjct: 346 SEGHATSVVGGGDTADVVARAGDADEXTFISTGGGASLELIEGK 389
>pdb|4FEY|A Chain A, An X-Ray Structure Of A Putative Phosphogylcerate Kinase
With Bound Adp From Francisella Tularensis Subsp.
Tularensis Schu S4
Length = 395
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/406 (39%), Positives = 237/406 (58%), Gaps = 40/406 (9%)
Query: 2 ALNKLSVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMS 51
A++ L++ ++L K+VL+RVDFNVP+K EAA+ TI+Y LD+G +V+LMS
Sbjct: 3 AMSFLTLKDVDLKDKKVLVRVDFNVPVKDGKVTSKVRIEAAIPTIQYILDQGG-AVILMS 61
Query: 52 HLGRP-DGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENL 110
HLGRP +G + ++SL+PVA+ L ++ K + F D + D AG I++ EN+
Sbjct: 62 HLGRPTEGEYDSQFSLEPVAKALSEIINKPVKFAKDWLD------GVDVKAGEIVMCENV 115
Query: 111 RFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEG-- 168
RF +GEK S +D+ K + LGD++V DAF TAHRA +S G
Sbjct: 116 RFN----------SGEK--KSTDDLSK---KIASLGDVFVMDAFATAHRAQASTYGVAKY 160
Query: 169 FEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGM 228
+G LL E+ KAL +P+KP AI+GG+KV+ K+ ++ NLLDKV +I+GGG+
Sbjct: 161 IPVACAGILLTNEIQALEKALKSPKKPMAAIVGGSKVSTKLSVLNNLLDKVEILIVGGGI 220
Query: 229 SYTFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGE 288
+ TF+K +G ++G SLY+ + +++ KA+ V + PVD A +F+E+A+
Sbjct: 221 ANTFIKA-EGFDVGNSLYEQDLVAEATEILAKAKALGVNIPVPVDVRVAKEFSENAQAII 279
Query: 289 ATVESGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVV 348
V V D M LDIGP+S+++ E + A I+WNGP GVFEF+NFA+GTK + A+
Sbjct: 280 KKVSDVVAD-EMILDIGPESQKIIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIA 338
Query: 349 DVXXXXXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGK 394
K+ +D+VS++ST GGA LE LEGK
Sbjct: 339 Q---SHAFSVAGGGDTIAAIEKFGIKDQVSYISTAGGAFLEFLEGK 381
>pdb|4EHJ|A Chain A, An X-Ray Structure Of A Putative Phosphogylcerate Kinase
From Francisella Tularensis Subsp. Tularensis Schu S4
pdb|4EHJ|B Chain B, An X-Ray Structure Of A Putative Phosphogylcerate Kinase
From Francisella Tularensis Subsp. Tularensis Schu S4
Length = 392
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 156/402 (38%), Positives = 232/402 (57%), Gaps = 40/402 (9%)
Query: 6 LSVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSHLGR 55
L++ ++L K+VL+RVDFNVP+K EAA+ TI+Y LD+G +V+L SHLGR
Sbjct: 4 LTLKDVDLKDKKVLVRVDFNVPVKDGKVTSKVRIEAAIPTIQYILDQGG-AVILXSHLGR 62
Query: 56 P-DGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYV 114
P +G + ++SL+PVA+ L ++ K + F D + D AG I+ EN+RF
Sbjct: 63 PTEGEYDSQFSLEPVAKALSEIINKPVKFAKDWLD------GVDVKAGEIVXCENVRFN- 115
Query: 115 EEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEG--FEQR 172
+GEK S +D+ K + LGD++V DAF TAHRA +S G
Sbjct: 116 ---------SGEK--KSTDDLSK---KIASLGDVFVXDAFATAHRAQASTYGVAKYIPVA 161
Query: 173 ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232
+G LL E+ KAL +P+KP AI+GG+KV+ K+ ++ NLLDKV +I+GGG++ TF
Sbjct: 162 CAGILLTNEIQALEKALKSPKKPXAAIVGGSKVSTKLSVLNNLLDKVEILIVGGGIANTF 221
Query: 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVE 292
+K +G ++G SLY+ + +++ KA+ V + PVD A +F+E+A+ V
Sbjct: 222 IKA-EGFDVGNSLYEQDLVAEATEILAKAKALGVNIPVPVDVRVAKEFSENAQAIIKKVS 280
Query: 293 SGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXX 352
V D + LDIGP+S+++ E + A I+WNGP GVFEF+NFA+GTK + A+
Sbjct: 281 DVVADEXI-LDIGPESQKIIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAQ--- 336
Query: 353 XXXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGK 394
K+ +D+VS++ST GGA LE LEGK
Sbjct: 337 SHAFSVAGGGDTIAAIEKFGIKDQVSYISTAGGAFLEFLEGK 378
>pdb|1V6S|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From Thermus
Thermophilus Hb8
pdb|1V6S|B Chain B, Crystal Structure Of Phosphoglycerate Kinase From Thermus
Thermophilus Hb8
Length = 390
Score = 231 bits (590), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 151/396 (38%), Positives = 225/396 (56%), Gaps = 38/396 (9%)
Query: 11 LNLAGKRVLMRVDFNVPMKEA----------ALDTIKYALDKGAKSVVLMSHLGRPDGSK 60
L+ GKRVL+RVD+NVP+++ +L T+++ L GA S+VL+SHLGRP G
Sbjct: 7 LDPKGKRVLVRVDYNVPVQDGKVQDETRILESLPTLRHLLAGGA-SLVLLSHLGRPKGP- 64
Query: 61 NLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPA---GSIILLENLRFYVEEE 117
+ KYSL PV E L+ L + F P EEA + A G ++LLEN+RF EE
Sbjct: 65 DPKYSLAPVGEALRAHLP-EARF--APFPPGSEEARREAEALRPGEVLLLENVRFEPGEE 121
Query: 118 GKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQRA-SGF 176
K E ++ +LG+ +V DAFG+AHRAH+S++G A +GF
Sbjct: 122 -----------KNDPELSARYA----RLGEAFVLDAFGSAHRAHASVVGVARLLPAYAGF 166
Query: 177 LLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFLKEL 236
L++KE+ S+ L +PE+P+ +LGGAKV+DKI +IE+LL +++ ++IGG M++TFLK L
Sbjct: 167 LMEKEVRALSRLLKDPERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLKAL 226
Query: 237 KGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVP 296
G +G SL + + + K L+ +AE V+++ P D + A++ +T +P
Sbjct: 227 GG-EVGRSLVEEDRLDLAKDLLGRAEALGVRVYLPEDVVAAERIEAGVET-RVFPARAIP 284
Query: 297 DGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXXXXXX 356
+MGLDIGPK+RE F + A+ + WNGP GVFE F +GT + A+ +
Sbjct: 285 VPYMGLDIGPKTREAFARALEGARTVFWNGPMGVFEVPPFDEGTLAVGQAIAAL--EGAF 342
Query: 357 XXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLE 392
+ +++ HVSTGGGASLE LE
Sbjct: 343 TVVGGGDSVAAVNRLGLKERFGHVSTGGGASLEFLE 378
>pdb|2IE8|A Chain A, Crystal Structure Of Thermus Caldophilus Phosphoglycerate
Kinase In The Open Conformation
Length = 390
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 150/396 (37%), Positives = 225/396 (56%), Gaps = 38/396 (9%)
Query: 11 LNLAGKRVLMRVDFNVPMKEA----------ALDTIKYALDKGAKSVVLMSHLGRPDGSK 60
L+ GKRVL+RVD+NVP+++ +L T+++ L GA S+VL+SHLGRP G
Sbjct: 7 LDPKGKRVLVRVDYNVPVQDGKVQDETRILESLPTLRHLLAGGA-SLVLLSHLGRPKGP- 64
Query: 61 NLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPA---GSIILLENLRFYVEEE 117
+ +YSL PV E L+ L + F P EEA + A G ++LLEN+RF EE
Sbjct: 65 DPRYSLAPVGEALRAHLP-EARF--APFPPGSEEARREAEALRPGEVLLLENVRFEPGEE 121
Query: 118 GKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQRA-SGF 176
K E ++ +LG+ +V DAFG+AHRAH+S++G A +GF
Sbjct: 122 -----------KNDPELSARYA----RLGEAFVLDAFGSAHRAHASVVGVARLLPAYAGF 166
Query: 177 LLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFLKEL 236
L++KE+ S+ L +PE+P+ +LGGAKV+DKI +IE+LL +++ ++IGG M++TFLK L
Sbjct: 167 LMEKEVRALSRLLKDPERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLKAL 226
Query: 237 KGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVP 296
G +G SL + + + K L+ +AE V+++ P D + A++ +T +P
Sbjct: 227 GG-EVGRSLVEEDRLDLAKDLLGRAEALGVRVYLPEDVVAAERIEAGVET-RVFPARAIP 284
Query: 297 DGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXXXXXX 356
+MGLDIGPK+RE F + A+ + WNGP GVFE F +GT + A+ +
Sbjct: 285 VPYMGLDIGPKTREAFARALEGARTVFWNGPMGVFEVPPFDEGTLAVGQAIAAL--EGAF 342
Query: 357 XXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLE 392
+ +++ HVSTGGGASLE LE
Sbjct: 343 TVVGGGDSVAAVNRLGLKERFGHVSTGGGASLEFLE 378
>pdb|1ZMR|A Chain A, Crystal Structure Of The E. Coli Phosphoglycerate Kinase
Length = 387
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 146/399 (36%), Positives = 215/399 (53%), Gaps = 47/399 (11%)
Query: 11 LNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHLGRP-DGS 59
L+LAGKRV +R D NVP+K+ A+L TI+ AL +GAK V++ SHLGRP +G
Sbjct: 9 LDLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTIELALKQGAK-VMVTSHLGRPTEGE 67
Query: 60 KNLKYSLKPVAEELKTLLKKDITFLDDCV-GPKVEEACADPPAGSIILLENLRFYVEEEG 118
N ++SL PV LK L + + D + G V E G +++LEN+RF
Sbjct: 68 YNEEFSLLPVVNYLKDKLSNPVRLVKDYLDGVDVAE-------GELVVLENVRFN----- 115
Query: 119 KGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEG--FEQRASGF 176
GEK +D + + L D++V DAFGTAHRA +S G G + +G
Sbjct: 116 -----KGEK-----KDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADVACAGP 165
Query: 177 LLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFLKEL 236
LL ELD KAL P +P +AI+GG+KV+ K+ ++++L +++I+GGG++ TF+
Sbjct: 166 LLAAELDALGKALKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIANTFIAA- 224
Query: 237 KGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVP 296
+G ++G SLY+ + K+L+ + P D A +F+E A +V
Sbjct: 225 QGHDVGKSLYEADLVDEAKRLL-----TTCNIPVPSDVRVATEFSETAPATLKSVNDVKA 279
Query: 297 DGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXXXXXX 356
D + LDIG S + E + AK I+WNGP GVFEF NF KGT+ + +A+ D
Sbjct: 280 DEQI-LDIGDASAQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEAFSIA 338
Query: 357 XXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGKI 395
+ DK+S++STGGGA LE +EGK+
Sbjct: 339 GGGDTLAAIDL---FGIADKISYISTGGGAFLEFVEGKV 374
>pdb|2CUN|A Chain A, Crystal Structure Of Phosphoglycerate Kinase From
Pyrococcus Horikoshii Ot3
pdb|2CUN|B Chain B, Crystal Structure Of Phosphoglycerate Kinase From
Pyrococcus Horikoshii Ot3
Length = 410
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 207/427 (48%), Gaps = 42/427 (9%)
Query: 11 LNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHLGRPDGSK 60
N K V +RVD N PMK+ A L TI+Y ++ GAK VV+ +H G+P
Sbjct: 7 FNFHNKTVFLRVDLNSPMKDGKIISDARFKAVLPTIRYLIESGAK-VVIGTHQGKPYSED 65
Query: 61 NLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGKG 120
+ + A L LL + + +++D G E + +G + +LENLRF EE
Sbjct: 66 YT--TTEEHARVLSELLDQHVEYIEDIFGRYAREKIKELKSGEVAILENLRFSAEEV--- 120
Query: 121 VNAAGEKVKASAEDVKKFR-ESLRKLGDIYVNDAFGTAHRAHSSMLG-EGFEQRASGFLL 178
K K E K F + L K+ D VNDAF TAHR+ S++G + GFL+
Sbjct: 121 ------KNKPIEECEKTFLVKKLSKVIDYVVNDAFATAHRSQPSLVGFARIKPMIMGFLM 174
Query: 179 KKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVN-EMIIGGGMSYTFLKELK 237
+KE++ +A + + P + +LGGAKV D ++++EN+L + ++++ GG+ K
Sbjct: 175 EKEIEALMRAYYSKDSPKIYVLGGAKVEDSLKVVENVLRRERADLVLTGGLVANVFTLAK 234
Query: 238 GMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLH----FPVDFITADKFAEDAKTGEATVES 293
G ++G + K + V+ AE+ + + PVDF D E + +
Sbjct: 235 GFDLGRKNVEFMKKKGLLDYVKHAEEILDEFYPYIRTPVDF-AVDYKGERVEIDLLSENR 293
Query: 294 GVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVXXX 353
G+ + +DIG ++ E ++E + +A++IV NGP GVFE E FA GT + A+ D
Sbjct: 294 GLLHQYQIMDIGKRTAEKYREILMKARIIVANGPMGVFEREEFAIGTVEVFKAIAD---S 350
Query: 354 XXXXXXXXXXXXXXXXKWNTEDKVSHVSTGGGASLELLEGKIKEKGFGENPVLGAHVQVH 413
K+ ++H+STGGGA L G+ E PVL A +Q+
Sbjct: 351 PAFSVLGGGHSIASIQKYGITG-ITHISTGGGAMLSFFAGE-------ELPVLRA-LQIS 401
Query: 414 YMYYAEA 420
Y + E
Sbjct: 402 YEKFKEV 408
>pdb|3B7X|A Chain A, Crystal Structure Of Human Fk506-Binding Protein 6
Length = 134
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 408 AHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEK 467
A V V Y Y E + P D Y RK+ P +LG + E +LSM++G L
Sbjct: 45 ASVLVKYSGYLEHMDRPFDSNYFRKT-PRLMKLGEDITLWGMELGLLSMRRGEL------ 97
Query: 468 SDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
+ F +G LGCPP IP +LFE+ L++F
Sbjct: 98 ARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDF 132
>pdb|1KT1|A Chain A, Structure Of The Large Fkbp-Like Protein, Fkbp51, Involved
In Steroid Receptor Complexes
Length = 457
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 395 IKEKGFGE-NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAI 453
+K G GE P++G V VHY AN D ++ R P F +G +I A++ +
Sbjct: 37 VKRVGHGEETPMIGDRVYVHYNGKL-ANGKKFDSSHDRNE-PFVFSIGKGQVIKAWDIGV 94
Query: 454 LSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
+M+KG + E +GA G P+IP+ A L FEV L++F
Sbjct: 95 ATMKKGEI------CHLLCKPEYAYGATGSLPKIPSNATLFFEVELLDF 137
>pdb|1ROT|A Chain A, Structure Of Fkbp59-I, The N-Terminal Domain Of A 59 Kda
Fk506-Binding Protein, Nmr, Minimized Average Structure
pdb|1ROU|A Chain A, Structure Of Fkbp59-I, The N-Terminal Domain Of A 59 Kda
Fk506-Binding Protein, Nmr, 22 Structures
Length = 149
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 395 IKEKGFG-ENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPER----FQLGSSGLIPAF 449
IK +G G E P++G V VHY + +D T S+ + F LG +I A+
Sbjct: 36 IKREGTGTETPMIGDRVFVHYTGWL------LDGTKFDSSLDRKDKFSFDLGKGEVIKAW 89
Query: 450 EYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
+ A+ +M+ G L E +G+ G PP+IP A L+FEV L F
Sbjct: 90 DIAVATMKVGEL------CRITCKPEYAYGSAGSPPKIPPNATLVFEVELFEF 136
>pdb|1R9H|A Chain A, Structural Genomics Of C.Elegans: Fkbp-Type Peptidylprolyl
Isomerase
Length = 135
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 395 IKEKGFGE-NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAI 453
IK++G G P G V+VHY+ E N D + R F LG +I ++ +
Sbjct: 20 IKKEGQGVVKPTTGTTVKVHYVGTLE-NGTKFDSSRDRGD-QFSFNLGRGNVIKGWDLGV 77
Query: 454 LSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFS 503
+M KG E ++F + +G G PP+IP A L+FEV L +S
Sbjct: 78 ATMTKG------EVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVELFEWS 121
>pdb|4DRJ|A Chain A, O-crystal Structure Of The Ppiase Domain Of Fkbp52,
Rapamycin And The Frb Fragment Of Mtor
Length = 144
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 395 IKEKGFG-ENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPER----FQLGSSGLIPAF 449
IK +G G E P++G V VHY + +D T S+ + F LG +I A+
Sbjct: 41 IKREGTGTEMPMIGDRVFVHYTGWL------LDGTKFDSSLDRKDKFSFDLGKGEVIKAW 94
Query: 450 EYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
+ AI +M+ GE E +G+ G PP+IP A L+FEV L F
Sbjct: 95 DIAIATMK------VGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEF 141
>pdb|1N1A|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human Fkbp52
pdb|1N1A|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human Fkbp52
Length = 140
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 395 IKEKGFG-ENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPER----FQLGSSGLIPAF 449
IK +G G E P++G V VHY + +D T S+ + F LG +I A+
Sbjct: 37 IKREGTGTEMPMIGDRVFVHYTGWL------LDGTKFDSSLDRKDKFSFDLGKGEVIKAW 90
Query: 450 EYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
+ AI +M+ GE E +G+ G PP+IP A L+FEV L F
Sbjct: 91 DIAIATMK------VGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEF 137
>pdb|4DRH|A Chain A, Co-crystal Structure Of The Ppiase Domain Of Fkbp51,
Rapamycin And The Frb Fragment Of Mtor At Low Ph
pdb|4DRH|D Chain D, Co-crystal Structure Of The Ppiase Domain Of Fkbp51,
Rapamycin And The Frb Fragment Of Mtor At Low Ph
pdb|4DRI|A Chain A, Co-crystal Structure Of The Ppiase Domain Of Fkbp51,
Rapamycin And The Frb Fragment Of Mtor
Length = 144
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 395 IKEKGFGE-NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAI 453
+K G GE P++G V VHY +N D ++ R P F LG +I A++ +
Sbjct: 41 VKRVGNGEETPMIGDKVYVHYKGKL-SNGKKFDSSHDRNE-PFVFSLGKGQVIKAWDIGV 98
Query: 454 LSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
+M+KG + E +G+ G P+IP+ A L FE+ L++F
Sbjct: 99 ATMKKGEI------CHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDF 141
>pdb|3O5E|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Vi
pdb|3O5F|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Vii
Length = 144
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 395 IKEKGFGE-NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAI 453
+K G GE P++G V VHY +N D ++ R P F LG +I A++ +
Sbjct: 41 VKRVGNGEETPMIGDKVYVHYKGKL-SNGKKFDSSHDRNE-PFVFSLGKGQVIKAWDIGV 98
Query: 454 LSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
+M+KG + E +G+ G P+IP+ A L FE+ L++F
Sbjct: 99 ATMKKGEI------CHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDF 141
>pdb|1Q1C|A Chain A, Crystal Structure Of N(1-260) Of Human Fkbp52
Length = 280
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 395 IKEKGFG-ENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPER----FQLGSSGLIPAF 449
IK +G G E P++G V VHY + +D T S+ + F LG +I A+
Sbjct: 57 IKREGTGTEMPMIGDRVFVHYTGWL------LDGTKFDSSLDRKDKFSFDLGKGEVIKAW 110
Query: 450 EYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
+ AI +M+ GE E +G+ G PP+IP A L+FEV L F
Sbjct: 111 DIAIATMK------VGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEF 157
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 437 RFQLGSS---GLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPP-RIPAKAD 492
RF++G L E AI M+KG E S + FG++G +IP A+
Sbjct: 209 RFEIGEGENLDLPYGLERAIQRMEKG------EHSIVYLKPSYAFGSVGKEKFQIPPNAE 262
Query: 493 LLFEVHLINF 502
L +E+HL +F
Sbjct: 263 LKYELHLKSF 272
>pdb|3O5D|A Chain A, Crystal Structure Of A Fragment Of Fkbp51 Comprising The
Fk1 And Fk2 Domains
pdb|3O5D|B Chain B, Crystal Structure Of A Fragment Of Fkbp51 Comprising The
Fk1 And Fk2 Domains
Length = 264
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 402 ENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSL 461
E P++G V VHY +N D ++ R P F LG +I A++ + +M+KG +
Sbjct: 49 ETPMIGDKVYVHYKGKL-SNGKKFDSSHDRNE-PFVFSLGKGQVIKAWDIGVATMKKGEI 106
Query: 462 NLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
E +G+ G P+IP+ A L FE+ L++F
Sbjct: 107 ------CHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDF 141
>pdb|3O5L|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form I
pdb|3O5M|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Ii
pdb|3O5M|B Chain B, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Ii
pdb|3O5O|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Iii
pdb|3O5P|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Iv
pdb|3O5Q|A Chain A, Fk1 Domain Mutant A19t Of Fkbp51, Crystal Form Iv, In
Presence Of Dmso
pdb|3O5R|A Chain A, Complex Of Fk506 With The Fk1 Domain Mutant A19t Of Fkbp51
pdb|4DRQ|A Chain A, Exploration Of Pipecolate Sulfonamides As Binders Of The
Fk506-Binding Proteins 51 And 52: Complex Of Fkbp51 With
2-(3-((R)-1-((S)-1-(3,5-
Dichlorophenylsulfonyl)piperidine-2-Carbonyloxy)-3-(3,
4-Dimethoxy - Phenyl)propyl)phenoxy)acetic Acid
pdb|4DRK|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-(3,
3-Dimethyl-2-Oxopentanoyl)piperidin-2-Yl]carbonyl}oxy)
Propyl]phenoxy}acetic Acid
pdb|4DRK|B Chain B, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-(3,
3-Dimethyl-2-Oxopentanoyl)piperidin-2-Yl]carbonyl}oxy)
Propyl]phenoxy}acetic Acid
pdb|4DRM|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-{[(1s,2r)-2-Ethyl-1-Hydroxycyclohexyl](Oxo)
Acetyl}piperidin-2-Yl]carbonyl}oxy)propyl]phenoxy}acetic
Acid
pdb|4DRN|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
{3-[(1r)-3-(3,4-Dimethoxyphenyl)-1-
({[(2s)-1-{[(1s,2r)-2-Ethyl-1-Hydroxycyclohexyl](Oxo)
Acetyl}piperidin-2-Yl]carbonyl}oxy)propyl]phenoxy}acetic
Acid
pdb|4DRO|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For
Fkbp51 And Fkbp52: Complex Of Fkbp51 With
(1r)-3-(3,4-Dimethoxyphenyl)-1- Phenylpropyl
(2s)-1-{[(1r,2s)-2-Ethyl-1-Hydroxycyclohexyl](Oxo)
Acetyl}piperidine-2-Carboxylate
pdb|4DRP|A Chain A, Evaluation Of Synthetic Fk506 Analogs As Ligands For The
Fk506-Binding Proteins 51 And 52: Complex Of Fkbp51 With
2-(3-((R)-3-(3,4-
Dimethoxyphenyl)-1-((S)-1-(2-((1r,
2s)-2-Ethyl-1-Hydroxy-Cyclohexyl)-
2-Oxoacetyl)piperidine-2-
Carbonyloxy)propyl)phenoxy)acetic Acid From
Cocrystallization
Length = 128
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 402 ENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSL 461
E P++G V VHY +N D ++ R P F LG +I A++ + +M+KG +
Sbjct: 33 ETPMIGDKVYVHYKGKL-SNGKKFDSSHDRNE-PFVFSLGKGQVIKAWDIGVATMKKGEI 90
Query: 462 NLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
E +G+ G P+IP+ A L FE+ L++F
Sbjct: 91 ------CHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDF 125
>pdb|3O5G|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form I
pdb|3O5I|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Ii
pdb|3O5I|B Chain B, Fk1 Domain Of Fkbp51, Crystal Form Ii
pdb|3O5J|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Iii
pdb|3O5K|A Chain A, Fk1 Domain Of Fkbp51, Crystal Form Viii
pdb|3O5K|B Chain B, Fk1 Domain Of Fkbp51, Crystal Form Viii
pdb|3O5K|C Chain C, Fk1 Domain Of Fkbp51, Crystal Form Viii
pdb|3O5K|D Chain D, Fk1 Domain Of Fkbp51, Crystal Form Viii
Length = 128
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 402 ENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSL 461
E P++G V VHY +N D ++ R P F LG +I A++ + +M+KG +
Sbjct: 33 ETPMIGDKVYVHYKGKL-SNGKKFDSSHDRNE-PFVFSLGKGQVIKAWDIGVATMKKGEI 90
Query: 462 NLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
E +G+ G P+IP+ A L FE+ L++F
Sbjct: 91 ------CHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDF 125
>pdb|1KT0|A Chain A, Structure Of The Large Fkbp-like Protein, Fkbp51, Involved
In Steroid Receptor Complexes
Length = 457
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 402 ENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSL 461
E P++G V VHY +N D ++ R P F LG +I A++ + +M++G +
Sbjct: 45 ETPMIGDKVYVHYKGKL-SNGKKFDSSHDRNE-PFVFSLGKGQVIKAWDIGVATMKRGEI 102
Query: 462 NLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
E +G+ G P+IP+ A L FE+ L++F
Sbjct: 103 ------CHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDF 137
>pdb|2KI3|A Chain A, Structural And Biochemical Characterization Of Fk506
Binding Domain From Plasmodium Vivax
pdb|3IHZ|A Chain A, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35 In Complex With Fk506
pdb|3IHZ|B Chain B, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35 In Complex With Fk506
pdb|3NI6|A Chain A, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35
pdb|3NI6|B Chain B, Crystal Structure Of The Fk506 Binding Domain Of
Plasmodium Vivax Fkbp35
pdb|3PA7|A Chain A, Crystal Structure Of Fkbp From Plasmodium Vivax In Complex
With Tetrapeptide Alpf
pdb|3PA7|B Chain B, Crystal Structure Of Fkbp From Plasmodium Vivax In Complex
With Tetrapeptide Alpf
Length = 126
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 379 HVSTGGGASLELLEGKIKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLRKSIPER 437
H++ GG +L K +G EN P G V VHY+ E++ D + R ++P +
Sbjct: 10 HLTEDGGVVKTILR---KGEGGEENAPKKGNEVTVHYVGKLESSGKVFDSSRER-NVPFK 65
Query: 438 FQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEV 497
F LG +I ++ + SM K EK + +G GC IP + L+FE+
Sbjct: 66 FHLGQGEVIKGWDICVASMTKN------EKCSVRLDSKYGYGEEGCGESIPGNSVLIFEI 119
Query: 498 HLINF 502
LI+F
Sbjct: 120 ELISF 124
>pdb|3JYM|A Chain A, Crystal Structure Of The 3 Fkbp Domains Of Wheat Fkbp73
pdb|3JYM|B Chain B, Crystal Structure Of The 3 Fkbp Domains Of Wheat Fkbp73
Length = 377
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 402 ENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSL 461
+ P +G V+VHY + D + R +F+LG +I ++ I +M+KG
Sbjct: 41 DTPEVGDEVEVHYTGTL-LDGKKFDSSRDRDDT-FKFKLGQGQVIKGWDQGIKTMKKG-- 96
Query: 462 NLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFS 503
E + F EL +G G PP IPA A L F+V L++++
Sbjct: 97 ----ENALFTIPPELAYGESGSPPTIPANATLQFDVELLSWT 134
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 17/113 (15%)
Query: 395 IKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAIL 454
+KE ENP V V Y E D T + KS F + L PA A+
Sbjct: 150 LKEGDKWENPKDPDEVFVKYEARLE------DGTVVSKSEGVEFTVKDGHLCPALAKAVK 203
Query: 455 SMQKGSLNLSGEKSDFFASYELCFGALGCPP-----RIPAKADLLFEVHLINF 502
+M+KG L K + FG +G P +P A L+ ++ L+++
Sbjct: 204 TMKKGEKVLLAVKPQY------GFGEMGRPAAGEGGAVPPNASLVIDLELVSW 250
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 15/126 (11%)
Query: 385 GASLELLEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPER----FQL 440
G ++L+ +KE E P GA V V +L +L+K E+ F+
Sbjct: 257 GDDKKILKKVLKEXEGYERPNEGAVVTVKI-----TGKLQDGTVFLKKGHDEQEPFEFKT 311
Query: 441 GSSGLIPAFEYAILSMQKGSLNLSGEKSDF-FASYELCFGALGCPPRIPAKADLLFEVHL 499
+I + A+L+M+KG + L ++ + S E A+ +P + +++EV L
Sbjct: 312 DEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAI-----VPPNSTVIYEVEL 366
Query: 500 INFSID 505
++F D
Sbjct: 367 VSFVKD 372
>pdb|3JXV|A Chain A, Crystal Structure Of The 3 Fkbp Domains Of Wheat Fkbp73
Length = 356
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 402 ENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSL 461
+ P +G V+VHY + D + R +F+LG +I ++ I +M+KG
Sbjct: 25 DTPEVGDEVEVHYTGTL-LDGKKFDSSRDRDDT-FKFKLGQGQVIKGWDQGIKTMKKG-- 80
Query: 462 NLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFS 503
E + F EL +G G PP IPA A L F+V L++++
Sbjct: 81 ----ENALFTIPPELAYGESGSPPTIPANATLQFDVELLSWT 118
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 17/113 (15%)
Query: 395 IKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAIL 454
+KE ENP V V Y E D T + KS F + L PA A+
Sbjct: 134 LKEGDKWENPKDPDEVFVKYEARLE------DGTVVSKSEGVEFTVKDGHLCPALAKAVK 187
Query: 455 SMQKGSLNLSGEKSDFFASYELCFGALGCPP-----RIPAKADLLFEVHLINF 502
+M+KG L K + FG +G P +P A L+ ++ L+++
Sbjct: 188 TMKKGEKVLLAVKPQY------GFGEMGRPAAGEGGAVPPNASLVIDLELVSW 234
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 15/126 (11%)
Query: 385 GASLELLEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPER----FQL 440
G ++L+ +KE E P GA V V +L +L+K E+ F+
Sbjct: 241 GDDKKILKKVLKEXEGYERPNEGAVVTVKI-----TGKLQDGTVFLKKGHDEQEPFEFKT 295
Query: 441 GSSGLIPAFEYAILSMQKGSLNLSGEKSDF-FASYELCFGALGCPPRIPAKADLLFEVHL 499
+I + A+L+M+KG + L ++ + S E A+ +P + +++EV L
Sbjct: 296 DEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAI-----VPPNSTVIYEVEL 350
Query: 500 INFSID 505
++F D
Sbjct: 351 VSFVKD 356
>pdb|2LGO|A Chain A, Solution Nmr Structure Of A Fkbp-Type Peptidyl-Prolyl
Cis-Trans Isomerase From Giardia Lamblia, Seattle
Structural Genomics Center For Infectious Disease Target
Gilaa.00840.A
Length = 130
Score = 48.9 bits (115), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 381 STGGGASLELLEGKIKEKGFG-ENPVLGAHVQVHY-MYYAEANELPIDITYLRKSIPERF 438
+ G G+ LE K+ G G P G V VHY + + + + + P +F
Sbjct: 16 TQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFD---SSRSRGKPFQF 72
Query: 439 QLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVH 498
LG+ +I ++ + +M G EK+ F Y+L +G G PP IP KA L+FEV
Sbjct: 73 TLGAGEVIKGWDQGVATMTLG------EKALFTIPYQLAYGERGYPPVIPPKATLVFEVE 126
Query: 499 LI 500
L+
Sbjct: 127 LL 128
>pdb|2PBC|A Chain A, Fk506-Binding Protein 2
pdb|2PBC|B Chain B, Fk506-Binding Protein 2
pdb|2PBC|C Chain C, Fk506-Binding Protein 2
pdb|2PBC|D Chain D, Fk506-Binding Protein 2
Length = 102
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Query: 403 NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPER----FQLGSSGLIPAFEYAILSMQK 458
+P+ V +M+Y E D T S+P+ F LG+ +I ++ +L M
Sbjct: 2 SPIKSRKGDVLHMHYTGKLE---DGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGM-- 56
Query: 459 GSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
GEK EL +G G PP+IP A L+FEV L+
Sbjct: 57 ----CEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKI 96
>pdb|2VN1|A Chain A, Crystal Structure Of The Fk506-Binding Domain Of
Plasmodium Falciparum Fkbp35 In Complex With Fk506
pdb|2VN1|B Chain B, Crystal Structure Of The Fk506-Binding Domain Of
Plasmodium Falciparum Fkbp35 In Complex With Fk506
Length = 129
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 404 PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNL 463
P G V VHY+ E+ D ++ R ++P +F L +I ++ + SM+K L
Sbjct: 34 PKKGNEVTVHYVGKLESTGKVFDSSFDR-NVPFKFHLEQGEVIKGWDICVSSMRKNEKCL 92
Query: 464 SGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
+S + +G GC IP + LLFE+ L++F
Sbjct: 93 VRIESMY------GYGDEGCGESIPGNSVLLFEIELLSF 125
>pdb|2OFN|A Chain A, Solution Structure Of Fk506-Binding Domain (Fkbd)of Fkbp35
From Plasmodium Falciparum
Length = 135
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 404 PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNL 463
P G V VHY+ E+ D ++ R ++P +F L +I ++ + SM+K L
Sbjct: 34 PKKGNEVTVHYVGKLESTGKVFDSSFDR-NVPFKFHLEQGEVIKGWDICVSSMRKNEKCL 92
Query: 464 SGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
+S + +G GC IP + LLFE+ L++F
Sbjct: 93 VRIESMY------GYGDEGCGESIPGNSVLLFEIELLSF 125
>pdb|1C9H|A Chain A, Crystal Structure Of Fkbp12.6 In Complex With Rapamycin
Length = 107
Score = 38.1 bits (87), Expect = 0.012, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 432 KSIPERFQLGSSGLIPAFEYAILSMQKGSLNLS-GEKSDFFASYELCFGALGCPPRIPAK 490
++ P +F++G +I FE +G+ +S G+++ + ++ +GA G P IP
Sbjct: 42 RNKPFKFRIGKQEVIKGFE-------EGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPN 94
Query: 491 ADLLFEVHLINF 502
A L+F+V L+N
Sbjct: 95 ATLIFDVELLNL 106
>pdb|1PBK|A Chain A, Homologous Domain Of Human Fkbp25
Length = 116
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 435 PERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCP-PRIPAKADL 493
P F++G +I ++ A+L+M KG EK+ E +G G P +IP A L
Sbjct: 53 PLSFKVGVGKVIRGWDEALLTMSKG------EKARLEIEPEWAYGKKGQPDAKIPPNAKL 106
Query: 494 LFEVHLINF 502
FEV L++
Sbjct: 107 TFEVELVDI 115
>pdb|2F4E|A Chain A, N-Terminal Domain Of Fkbp42 From Arabidopsis Thaliana
pdb|2F4E|B Chain B, N-Terminal Domain Of Fkbp42 From Arabidopsis Thaliana
Length = 180
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 389 ELLEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPA 448
E + +I ++G G P + +HY + + ++ + T+ + P LG
Sbjct: 49 EKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQ-PIELVLGKE----K 103
Query: 449 FEYAILSMQKGSLNLSGEKSDFFASYELCFGALG--CPPRIPAKADLLFEVHLINF 502
E A L++ S+ SGE++ +EL +G G P +P ADLL+EV +I F
Sbjct: 104 KELAGLAIGVASMK-SGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGF 158
>pdb|2IF4|A Chain A, Crystal Structure Of A Multi-Domain Immunophilin From
Arabidopsis Thaliana
Length = 338
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 389 ELLEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPA 448
E + +I ++G G P + +HY + + ++ + T+ + P LG
Sbjct: 49 EKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQ-PIELVLGKEKK--- 104
Query: 449 FEYAILSMQKGSLNLSGEKSDFFASYELCFGALG--CPPRIPAKADLLFEVHLINF 502
E A L++ S+ SGE++ +EL +G G P +P ADLL+EV +I F
Sbjct: 105 -ELAGLAIGVASMK-SGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGF 158
>pdb|2DG4|A Chain A, Fk506-Binding Protein Mutant Wf59 Complexed With Rapamycin
Length = 107
Score = 36.2 bits (82), Expect = 0.048, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 432 KSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKA 491
++ P +F LG +I FE + M G+++ S + +GA G P IP A
Sbjct: 42 RNKPFKFMLGKQEVIRGFEEGVAQMS------VGQRAKLTISPDYAYGATGHPGIIPPHA 95
Query: 492 DLLFEVHLINF 502
L+F+V L+
Sbjct: 96 TLVFDVELLKL 106
>pdb|1BKF|A Chain A, Fk506 Binding Protein Fkbp Mutant R42kH87V COMPLEX WITH
Immunosuppressant Fk506
Length = 107
Score = 35.8 bits (81), Expect = 0.055, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 432 KSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKA 491
K+ P +F LG +I +E + M G+++ S + +GA G P IP A
Sbjct: 42 KNKPFKFMLGKQEVIRGWEEGVAQMS------VGQRAKLTISPDYAYGATGVPGIIPPHA 95
Query: 492 DLLFEVHLINF 502
L+F+V L+
Sbjct: 96 TLVFDVELLKL 106
>pdb|3UQA|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation A54e From
Burkholderia Pseudomallei Complexed With Fk506
Length = 209
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 12/128 (9%)
Query: 378 SHVSTGGGASLELLEGKIK----EKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKS 433
+H GG+++ E +K +G G G V VHY + + D + R
Sbjct: 89 AHREQIGGSTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQ-KFDSSKDRND 147
Query: 434 IPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADL 493
P F LG +I ++ + M+ G + +L +GA G IP A L
Sbjct: 148 -PFEFVLGGGMVIKGWDEGVQGMKVGGVRR------LTIPPQLGYGARGAGGVIPPNATL 200
Query: 494 LFEVHLIN 501
+FEV L++
Sbjct: 201 VFEVELLD 208
>pdb|1BL4|A Chain A, Fkbp Mutant F36v Complexed With Remodeled Synthetic Ligand
pdb|1BL4|B Chain B, Fkbp Mutant F36v Complexed With Remodeled Synthetic Ligand
Length = 107
Score = 35.0 bits (79), Expect = 0.11, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 404 PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNL 463
P G VHY E + +D + R P +F LG +I +E + M
Sbjct: 16 PKRGQTCVVHYTGMLEDGK-KVDSSRDRNK-PFKFMLGKQEVIRGWEEGVAQMS------ 67
Query: 464 SGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
G+++ S + +GA G P IP A L+F+V L+
Sbjct: 68 VGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKL 106
>pdb|3UF8|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With A G95a Surface Mutation From
Burkholderia Pseudomallei Complexed With Fk506
Length = 209
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 12/128 (9%)
Query: 378 SHVSTGGGASLELLEGKIK----EKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKS 433
+H GG+++ E +K +G G G V VHY + + D + R
Sbjct: 89 AHREQIGGSTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQ-KFDSSKDRND 147
Query: 434 IPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADL 493
P F LG +I ++ + M+ G + +L +GA G IP A L
Sbjct: 148 -PFAFVLGGGMVIKGWDEGVQGMKVGGVRR------LTIPPQLGYGARGAAGVIPPNATL 200
Query: 494 LFEVHLIN 501
+FEV L++
Sbjct: 201 VFEVELLD 208
>pdb|3VAW|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation V3i From
Burkholderia Pseudomallei Complexed With Fk506
Length = 209
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 12/128 (9%)
Query: 378 SHVSTGGGASLELLEGKIK----EKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKS 433
+H GG+++ E +K +G G G V VHY + + D + R
Sbjct: 89 AHREQIGGSTIVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQ-KFDSSKDRND 147
Query: 434 IPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADL 493
P F LG +I ++ + M+ G + +L +GA G IP A L
Sbjct: 148 -PFAFVLGGGMVIKGWDEGVQGMKVGGVRR------LTIPPQLGYGARGAGGVIPPNATL 200
Query: 494 LFEVHLIN 501
+FEV L++
Sbjct: 201 VFEVELLD 208
>pdb|4GGQ|C Chain C, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
pdb|4GGQ|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
pdb|4GGQ|B Chain B, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
pdb|4GGQ|D Chain D, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase From Burkholderia Pseudomallei
Complexed With Cj40
Length = 209
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 12/128 (9%)
Query: 378 SHVSTGGGASLELLEGKIK----EKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKS 433
+H GG+++ E +K +G G G V VHY + + D + R
Sbjct: 89 AHREQIGGSTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQ-KFDSSKDRND 147
Query: 434 IPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADL 493
P F LG +I ++ + M+ G + +L +GA G IP A L
Sbjct: 148 -PFAFVLGGGMVIKGWDEGVQGMKVGGVRR------LTIPPQLGYGARGAGGVIPPNATL 200
Query: 494 LFEVHLIN 501
+FEV L++
Sbjct: 201 VFEVELLD 208
>pdb|1EYM|A Chain A, Fk506 Binding Protein Mutant, Homodimeric Complex
pdb|1EYM|B Chain B, Fk506 Binding Protein Mutant, Homodimeric Complex
Length = 107
Score = 34.3 bits (77), Expect = 0.17, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 404 PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNL 463
P G VHY E + +D + R P +F LG +I +E + M
Sbjct: 16 PKRGQTCVVHYTGMLEDGK-KMDSSRDRNK-PFKFMLGKQEVIRGWEEGVAQMS------ 67
Query: 464 SGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
G+++ S + +GA G P IP A L+F+V L+
Sbjct: 68 VGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKL 106
>pdb|1FKB|A Chain A, Atomic Structure Of The Rapamycin Human Immunophilin Fkbp-
12 Complex
pdb|1FKG|A Chain A, Design, Synthesis, And Kinetic Evaluation Of High-Affinity
Fkbp Ligands, And The X-Ray Crystal Structures Of Their
Complexes With Fkbp12
pdb|1FKH|A Chain A, Design, Synthesis, And Kinetic Evaluation Of High-Affinity
Fkbp Ligands, And The X-Ray Crystal Structures Of Their
Complexes With Fkbp12
pdb|1FAP|A Chain A, The Structure Of The Immunophilin-Immunosuppressant
Fkbp12- Rapamycin Complex Interacting With Human Frap
pdb|1FKI|A Chain A, Design, Synthesis, And Kinetic Evaluation Of High-Affinity
Fkbp Ligands, And The X-Ray Crystal Structures Of Their
Complexes With Fkbp12
pdb|1FKI|B Chain B, Design, Synthesis, And Kinetic Evaluation Of High-Affinity
Fkbp Ligands, And The X-Ray Crystal Structures Of Their
Complexes With Fkbp12
Length = 107
Score = 34.3 bits (77), Expect = 0.17, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 432 KSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKA 491
++ P +F LG +I +E + M G+++ S + +GA G P IP A
Sbjct: 42 RNKPFKFMLGKQEVIRGWEEGVAQMS------VGQRAKLTISPDYAYGATGHPGIIPPHA 95
Query: 492 DLLFEVHLINF 502
L+F+V L+
Sbjct: 96 TLVFDVELLKL 106
>pdb|3H9R|B Chain B, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
pdb|3MDY|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 109
Score = 34.3 bits (77), Expect = 0.17, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 432 KSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKA 491
++ P +F LG +I +E + M G+++ S + +GA G P IP A
Sbjct: 44 RNKPFKFMLGKQEVIRGWEEGVAQMS------VGQRAKLTISPDYAYGATGHPGIIPPHA 97
Query: 492 DLLFEVHLINF 502
L+F+V L+
Sbjct: 98 TLVFDVELLKL 108
>pdb|2FAP|A Chain A, The Structure Of The Immunophilin-Immunosuppressant
Fkbp12- (C16)-Ethoxy Rapamycin Complex Interacting With
Huma
pdb|1B6C|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|E Chain E, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|G Chain G, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1QPF|A Chain A, Fk506 Binding Protein (12 Kda, Human) Complex With
L-709,858
pdb|1QPF|D Chain D, Fk506 Binding Protein (12 Kda, Human) Complex With
L-709,858
pdb|1QPL|A Chain A, Fk506 Binding Protein (12 Kda, Human) Complex With
L-707,587
pdb|1QPL|C Chain C, Fk506 Binding Protein (12 Kda, Human) Complex With
L-707,587
pdb|1D6O|A Chain A, Native Fkbp
pdb|1D6O|B Chain B, Native Fkbp
pdb|1D7H|A Chain A, Fkbp Complexed With Dmso
pdb|1D7H|B Chain B, Fkbp Complexed With Dmso
pdb|1D7I|A Chain A, Fkbp Complexed With Methyl Methylsulfinylmethyl Sulfide
(Dss)
pdb|1D7I|B Chain B, Fkbp Complexed With Methyl Methylsulfinylmethyl Sulfide
(Dss)
pdb|1D7J|A Chain A, Fkbp Complexed With 4-Hydroxy-2-Butanone
pdb|1D7J|B Chain B, Fkbp Complexed With 4-Hydroxy-2-Butanone
pdb|3FAP|A Chain A, Atomic Structures Of The Rapamycin Analogs In Complex With
Both Human Fkbp12 And Frb Domain Of Frap
pdb|4FAP|A Chain A, Atomic Structures Of The Rapamycin Analogs In Complex With
Both Human Fkbp12 And Frb Domain Of Frap
pdb|1J4R|A Chain A, Fk506 Binding Protein Complexed With Fkb-001
pdb|1J4R|B Chain B, Fk506 Binding Protein Complexed With Fkb-001
pdb|1J4R|D Chain D, Fk506 Binding Protein Complexed With Fkb-001
pdb|1J4H|A Chain A, Crystal Structure Analysis Of The Fkbp12 Complexed With
000107 Small Molecule
pdb|1J4I|A Chain A, Crystal Structure Analysis Of The Fkbp12 Complexed With
000308 Small Molecule
pdb|2DG3|A Chain A, Wildtype Fk506-Binding Protein Complexed With Rapamycin
pdb|1FKD|A Chain A, Fk-506 Binding Protein: Three-Dimensional Structure Of The
Complex With The Antagonist L-685,818
pdb|1FKF|A Chain A, Atomic Structure Of Fkbp-Fk506, An
Immunophilin-Immunosuppressant Complex
pdb|1FKJ|A Chain A, Atomic Structure Of Fkbp12-Fk506, An Immunophilin
Immunosuppressant Complex
pdb|2FKE|A Chain A, Fk-506-Binding Protein: Three-Dimensional Structure Of The
Complex With The Antagonist L-685,818
pdb|1F40|A Chain A, Solution Structure Of Fkbp12 Complexed With Gpi-1046, A
Neurotrophic Ligand
pdb|1FKR|A Chain A, Solution Structure Of Fkbp, A Rotamase Enzyme And Receptor
For Fk506 And Rapamycin
pdb|1FKS|A Chain A, Solution Structure Of Fkbp, A Rotamase Enzyme And Receptor
For Fk506 And Rapamycin
pdb|1FKT|A Chain A, Solution Structure Of Fkbp, A Rotamase Enzyme And Receptor
For Fk506 And Rapamycin
pdb|2PPN|A Chain A, Crystal Structure Of Fkbp12
pdb|1A7X|A Chain A, Fkbp12-Fk1012 Complex
pdb|1A7X|B Chain B, Fkbp12-Fk1012 Complex
pdb|4DH0|A Chain A, X-Ray Crystal Structure Of 28-O-Methylrapamycin Complexed
With Fkbp12: Is The Cyclohexyl Moiety Part Of The
Effector Domain Of Rapamycin?
pdb|2RSE|A Chain A, Nmr Structure Of Fkbp12-Mtor Frb Domain-Rapamycin Complex
Structure Determined Based On Pcs
pdb|1NSG|A Chain A, The Structure Of The Immunophilin-Immunosuppressant
Fkbp12- Rapamycin Complex Interacting With Human Frap
Length = 107
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 432 KSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKA 491
++ P +F LG +I +E + M G+++ S + +GA G P IP A
Sbjct: 42 RNKPFKFMLGKQEVIRGWEEGVAQMS------VGQRAKLTISPDYAYGATGHPGIIPPHA 95
Query: 492 DLLFEVHLINF 502
L+F+V L+
Sbjct: 96 TLVFDVELLKL 106
>pdb|1TCO|C Chain C, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
Length = 107
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 432 KSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKA 491
++ P +F LG +I +E + M G+++ S + +GA G P IP A
Sbjct: 42 RNKPFKFMLGKQEVIRGWEEGVAQMS------VGQRAKLTISPDYAYGATGHPGIIPPHA 95
Query: 492 DLLFEVHLINF 502
L+F+V L+
Sbjct: 96 TLVFDVELLKL 106
>pdb|1FKK|A Chain A, Atomic Structure Of Fkbp12, An Immunophilin Binding
Protein
pdb|1FKL|A Chain A, Atomic Structure Of Fkbp12-Rapaymycin, An Immunophilin-
Immunosuppressant Complex
Length = 107
Score = 33.9 bits (76), Expect = 0.21, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 432 KSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKA 491
++ P +F LG +I +E + M G+++ S + +GA G P IP A
Sbjct: 42 RNKPFKFVLGKQEVIRGWEEGVAQMS------VGQRAKLTISPDYAYGATGHPGIIPPNA 95
Query: 492 DLLFEVHLINF 502
L+F+V L+
Sbjct: 96 TLIFDVELLKL 106
>pdb|2DG9|A Chain A, Fk506-Binding Protein Mutant Wl59 Complexed With Rapamycin
Length = 107
Score = 33.9 bits (76), Expect = 0.24, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 432 KSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKA 491
++ P +F LG +I E + M G+++ S + +GA G P IP A
Sbjct: 42 RNKPFKFMLGKQEVIRGLEEGVAQMS------VGQRAKLTISPDYAYGATGHPGIIPPHA 95
Query: 492 DLLFEVHLINF 502
L+F+V L+
Sbjct: 96 TLVFDVELLKL 106
>pdb|2PPP|A Chain A, Crystal Structure Of E60q Mutant Of Fkbp12
Length = 107
Score = 33.1 bits (74), Expect = 0.38, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 432 KSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKA 491
++ P +F LG +I ++ + M G+++ S + +GA G P IP A
Sbjct: 42 RNKPFKFMLGKQEVIRGWQEGVAQMS------VGQRAKLTISPDYAYGATGHPGIIPPHA 95
Query: 492 DLLFEVHLINF 502
L+F+V L+
Sbjct: 96 TLVFDVELLKL 106
>pdb|3UQB|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Fk506
pdb|4FN2|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj37
pdb|4FN2|B Chain B, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj37
pdb|4G50|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj168
pdb|4G50|B Chain B, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj168
pdb|4GIV|A Chain A, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj183
pdb|4GIV|B Chain B, Crystal Structure Of A Smt Fusion Peptidyl-Prolyl
Cis-Trans Isomerase With Surface Mutation D44g From
Burkholderia Pseudomallei Complexed With Cj183
Length = 209
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 14/129 (10%)
Query: 378 SHVSTGGGASLELLEGKIK----EKGFGENPVLGAHVQVHYM-YYAEANELPIDITYLRK 432
+H GG+++ E +K +G G G V VHY + + + + +
Sbjct: 89 AHREQIGGSTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFG---SSKDR 145
Query: 433 SIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKAD 492
+ P F LG +I ++ + M+ G + +L +GA G IP A
Sbjct: 146 NDPFAFVLGGGMVIKGWDEGVQGMKVGGVRR------LTIPPQLGYGARGAGGVIPPNAT 199
Query: 493 LLFEVHLIN 501
L+FEV L++
Sbjct: 200 LVFEVELLD 208
>pdb|2PPO|A Chain A, Crystal Structure Of E60a Mutant Of Fkbp12
Length = 107
Score = 32.0 bits (71), Expect = 0.85, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 432 KSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKA 491
++ P +F LG +I + + M G+++ S + +GA G P IP A
Sbjct: 42 RNKPFKFMLGKQEVIRGWAEGVAQMS------VGQRAKLTISPDYAYGATGHPGIIPPHA 95
Query: 492 DLLFEVHLINF 502
L+F+V L+
Sbjct: 96 TLVFDVELLKL 106
>pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln
Mutant Copa, A Copper-Transporting P-Type Atpase, Bound
With Amppcp-Mg
pdb|3A1E|B Chain B, Crystal Structure Of The P- And N-Domains Of His462gln
Mutant Copa, A Copper-Transporting P-Type Atpase, Bound
With Amppcp-Mg
Length = 287
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 12/71 (16%)
Query: 13 LAGKRVLMRVDFNVPMK---EAALDTIKYALDKGAKSVVLMSHLGRPDG----SKNLKYS 65
L G + LM DF V + E AL+ L++ AK+ V+++ GR +G S LK S
Sbjct: 113 LVGNKRLME-DFGVAVSNEVELALEK----LEREAKTAVIVARNGRVEGIIAVSDTLKES 167
Query: 66 LKPVAEELKTL 76
KP +ELK +
Sbjct: 168 AKPAVQELKRM 178
>pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A
Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg
pdb|3A1C|B Chain B, Crystal Structure Of The P- And N-Domains Of Copa, A
Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg
pdb|3A1D|A Chain A, Crystal Structure Of The P- And N-domains Of Copa, A
Copper- Transporting P-type Atpase, Bound With Adp-mg
pdb|3A1D|B Chain B, Crystal Structure Of The P- And N-domains Of Copa, A
Copper- Transporting P-type Atpase, Bound With Adp-mg
Length = 287
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 12/71 (16%)
Query: 13 LAGKRVLMRVDFNVPMK---EAALDTIKYALDKGAKSVVLMSHLGRPDG----SKNLKYS 65
L G + LM DF V + E AL+ L++ AK+ V+++ GR +G S LK S
Sbjct: 113 LVGNKRLME-DFGVAVSNEVELALEK----LEREAKTAVIVARNGRVEGIIAVSDTLKES 167
Query: 66 LKPVAEELKTL 76
KP +ELK +
Sbjct: 168 AKPAVQELKRM 178
>pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial
P-Type Atpase Copper Transporter Copa
pdb|3J09|B Chain B, High Resolution Helical Reconstruction Of The Bacterial
P-Type Atpase Copper Transporter Copa
Length = 723
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 12/71 (16%)
Query: 13 LAGKRVLMRVDFNVPMK---EAALDTIKYALDKGAKSVVLMSHLGRPDG----SKNLKYS 65
L G + LM DF V + E AL+ L++ AK+ V+++ GR +G S LK S
Sbjct: 485 LVGNKRLME-DFGVAVSNEVELALEK----LEREAKTAVIVARNGRVEGIIAVSDTLKES 539
Query: 66 LKPVAEELKTL 76
KP +ELK +
Sbjct: 540 AKPAVQELKRM 550
>pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial
P-Type Atpase Copper Transporter Copa
pdb|3J08|B Chain B, High Resolution Helical Reconstruction Of The Bacterial
P-Type Atpase Copper Transporter Copa
Length = 645
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 12/71 (16%)
Query: 13 LAGKRVLMRVDFNVPMK---EAALDTIKYALDKGAKSVVLMSHLGRPDG----SKNLKYS 65
L G + LM DF V + E AL+ L++ AK+ V+++ GR +G S LK S
Sbjct: 407 LVGNKRLME-DFGVAVSNEVELALEK----LEREAKTAVIVARNGRVEGIIAVSDTLKES 461
Query: 66 LKPVAEELKTL 76
KP +ELK +
Sbjct: 462 AKPAVQELKRM 472
>pdb|3K50|A Chain A, Crystal Structure Of Putative S41 Protease (Yp_211611.1)
From Bacteroides Fragilis Nctc 9343 At 2.00 A Resolution
Length = 403
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 300 MGLDIGPKSRELFKEPIARAKVIVWNGPS-GVFEFENFAKG 339
+G P SR L +P+ R ++I WNG G + F G
Sbjct: 160 IGETTXPASRSLVDKPVHRFEIIPWNGKKVGYLXYNEFKAG 200
>pdb|2YFK|A Chain A, Crystal Structure Of A Putative Transcarbamoylase From
Enterococcus Faecalis
pdb|2YFK|B Chain B, Crystal Structure Of A Putative Transcarbamoylase From
Enterococcus Faecalis
Length = 418
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 84/212 (39%), Gaps = 34/212 (16%)
Query: 116 EEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGF-----E 170
+EGK + GE V+ +A + + + D+Y+ H S + EG+ E
Sbjct: 93 DEGKSQISHGETVRETANMISFMADIIGIRDDMYIGKGNAYMHEVSES-VQEGYKDGVLE 151
Query: 171 QRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSY 230
QR + L+ ++D+ ++A+ + + GG IENL K M SY
Sbjct: 152 QRPTLVNLQCDIDHPTQAMADALH-LIHEFGG---------IENLKGKKVAMTWAYSPSY 201
Query: 231 ----------TFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKF 280
L GM++ L PEG +I+ ++ E A+KN + F +F +
Sbjct: 202 GKPLSVPQGIVGLMTRLGMDV--VLAHPEGYEIMPEVEEVAKKNAAE--FGGNFTKTNSM 257
Query: 281 AEDAKTGEATVESGVPDGWMGLDIGPKSRELF 312
AE K + P W K EL+
Sbjct: 258 AEAFKDADVV----YPKSWAPFAAMEKRTELY 285
>pdb|1JVW|A Chain A, Trypanosoma Cruzi Macrophage Infectivity Potentiator
(Tcmip)
Length = 167
Score = 29.6 bits (65), Expect = 3.8, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 465 GEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFSIDPQVVRSSADIESLLR 520
G++ F Y+L +G G IP + L F+V LI+ D R++ +++ +LR
Sbjct: 104 GDRWRLFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIK-DGGKGRTAEEVDEILR 158
>pdb|1QZ2|A Chain A, Crystal Structure Of Fkbp52 C-Terminal Domain Complex With
The C-Terminal Peptide Meevd Of Hsp90
pdb|1QZ2|B Chain B, Crystal Structure Of Fkbp52 C-Terminal Domain Complex With
The C-Terminal Peptide Meevd Of Hsp90
pdb|1QZ2|C Chain C, Crystal Structure Of Fkbp52 C-Terminal Domain Complex With
The C-Terminal Peptide Meevd Of Hsp90
Length = 336
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Query: 437 RFQLGSS---GLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPP-RIPAKAD 492
RF++G L E AI M+KG E S + FG++G +IP A+
Sbjct: 66 RFEIGEGENLDLPYGLERAIQRMEKG------EHSIVYLKPSYAFGSVGKEKFQIPPNAE 119
Query: 493 LLFEVHLINF 502
L +E+HL +F
Sbjct: 120 LKYELHLKSF 129
>pdb|3V03|A Chain A, Crystal Structure Of Bovine Serum Albumin
pdb|3V03|B Chain B, Crystal Structure Of Bovine Serum Albumin
pdb|4F5S|A Chain A, Crystal Structure Of Bovine Serum Albumin
pdb|4F5S|B Chain B, Crystal Structure Of Bovine Serum Albumin
Length = 583
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 62 LKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEAC 96
LK+ K E+LKT+++ + F+D C +EAC
Sbjct: 532 LKHKPKATEEQLKTVMENFVAFVDKCCAADDKEAC 566
>pdb|2B8E|A Chain A, Copa Atp Binding Domain
pdb|2B8E|B Chain B, Copa Atp Binding Domain
pdb|2B8E|C Chain C, Copa Atp Binding Domain
Length = 273
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 40 LDKGAKSVVLMSHLGRPDG----SKNLKYSLKPVAEELK 74
L++ AK+ V+++ GR +G S LK S KP +ELK
Sbjct: 118 LEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELK 156
>pdb|4DZ3|A Chain A, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase
With Surface Mutation M61h From Burkholderia
Pseudomallei Complexed With Fk506
pdb|4DZ3|B Chain B, Crystal Structure Of A Peptidyl-Prolyl Cis-Trans Isomerase
With Surface Mutation M61h From Burkholderia
Pseudomallei Complexed With Fk506
Length = 113
Score = 28.9 bits (63), Expect = 8.3, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 8/104 (7%)
Query: 398 KGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQ 457
+G G G V VHY + + D + R P F LG +I ++ + M+
Sbjct: 17 EGSGAEARAGQTVSVHYTGWLTDGQ-KFDSSKDRND-PFAFVLGGGHVIKGWDEGVQGMK 74
Query: 458 KGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLIN 501
G + +L +GA G IP A L+FEV L++
Sbjct: 75 VGGVR------RLTIPPQLGYGARGAGGVIPPNATLVFEVELLD 112
>pdb|1Q08|A Chain A, Crystal Structure Of The Zn(Ii) Form Of E. Coli Zntr, A
Zinc-Sensing Transcriptional Regulator, At 1.9 A
Resolution (Space Group P212121)
pdb|1Q08|B Chain B, Crystal Structure Of The Zn(Ii) Form Of E. Coli Zntr, A
Zinc-Sensing Transcriptional Regulator, At 1.9 A
Resolution (Space Group P212121)
pdb|1Q09|A Chain A, Crystal Structure Of The Zn(Ii) Form Of E. Coli Zntr, A
Zinc-Sensing Transcriptional Regulator (Space Group
I4122)
pdb|1Q0A|A Chain A, Crystal Structure Of The Zn(Ii) Form Of E. Coli Zntr, A
Zinc-Sensing Transcriptional Regulator (Space Group
C222)
pdb|1Q0A|B Chain B, Crystal Structure Of The Zn(Ii) Form Of E. Coli Zntr, A
Zinc-Sensing Transcriptional Regulator (Space Group
C222)
Length = 99
Score = 28.9 bits (63), Expect = 8.3, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 116 EEGKG-VNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQRAS 174
+E KG V ++V+A +++ + SL++L D GTAH + + E EQ AS
Sbjct: 38 QESKGIVQERLQEVEARIAELQSMQRSLQRLNDA----CCGTAHSSVYCSILEALEQGAS 93
Query: 175 G 175
G
Sbjct: 94 G 94
>pdb|3FHQ|A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
pdb|3FHQ|B Chain B, Structure Of Endo-Beta-N-Acetylglucosaminidase A
pdb|3FHQ|D Chain D, Structure Of Endo-Beta-N-Acetylglucosaminidase A
pdb|3FHQ|F Chain F, Structure Of Endo-Beta-N-Acetylglucosaminidase A
Length = 621
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 10/57 (17%)
Query: 234 KELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPV---DFITADKFAEDAKTG 287
KEL G + G +Y ++ LVE++++N+V+LH F+ +D D K+G
Sbjct: 570 KELIGTSAGDRIY-------IEGLVEESKQNDVRLHIEALSETFVPSDARMIDIKSG 619
>pdb|3FHA|A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A
pdb|3FHA|B Chain B, Structure Of Endo-Beta-N-Acetylglucosaminidase A
pdb|3FHA|C Chain C, Structure Of Endo-Beta-N-Acetylglucosaminidase A
pdb|3FHA|D Chain D, Structure Of Endo-Beta-N-Acetylglucosaminidase A
Length = 621
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 10/57 (17%)
Query: 234 KELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPV---DFITADKFAEDAKTG 287
KEL G + G +Y ++ LVE++++N+V+LH F+ +D D K+G
Sbjct: 570 KELIGTSAGDRIY-------IEGLVEESKQNDVRLHIEALSETFVPSDARMIDIKSG 619
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.137 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,393,604
Number of Sequences: 62578
Number of extensions: 665037
Number of successful extensions: 2127
Number of sequences better than 100.0: 106
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 1934
Number of HSP's gapped (non-prelim): 114
length of query: 528
length of database: 14,973,337
effective HSP length: 103
effective length of query: 425
effective length of database: 8,527,803
effective search space: 3624316275
effective search space used: 3624316275
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)