Query psy8371
Match_columns 528
No_of_seqs 286 out of 2350
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 16:56:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8371.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8371hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oz7_A Phosphoglycerate kinase 100.0 9E-138 3E-142 1079.6 36.4 398 3-400 5-413 (417)
2 1vpe_A Phosphoglycerate kinase 100.0 3E-135 1E-139 1054.9 35.8 380 4-401 1-392 (398)
3 1php_A 3-phosphoglycerate kina 100.0 4E-135 1E-139 1053.7 34.7 379 3-401 1-390 (394)
4 2wzb_A Phosphoglycerate kinase 100.0 3E-135 1E-139 1060.5 32.5 395 4-401 4-412 (416)
5 1qpg_A PGK, 3-phosphoglycerate 100.0 1E-134 3E-139 1056.2 35.2 394 4-401 4-410 (415)
6 16pk_A PGK, 3-phosphoglycerate 100.0 4E-134 1E-138 1050.3 36.2 381 5-401 2-411 (415)
7 1v6s_A Phosphoglycerate kinase 100.0 1E-133 3E-138 1041.7 36.6 373 6-400 2-386 (390)
8 3q3v_A Phosphoglycerate kinase 100.0 1E-133 5E-138 1042.9 35.5 376 3-401 5-396 (403)
9 4fey_A Phosphoglycerate kinase 100.0 4E-133 1E-137 1037.3 33.3 371 3-400 4-387 (395)
10 1zmr_A Phosphoglycerate kinase 100.0 3E-131 1E-135 1020.9 32.0 365 3-400 1-379 (387)
11 2cun_A Phosphoglycerate kinase 100.0 2E-129 9E-134 1014.2 34.1 372 5-401 1-397 (410)
12 1fw8_A PGK P72, phosphoglycera 100.0 5E-111 2E-115 877.9 29.4 337 62-402 2-341 (416)
13 1jvw_A Macrophage infectivity 99.9 2.7E-22 9.4E-27 188.4 11.6 129 378-522 31-160 (167)
14 2lgo_A FKBP; infectious diseas 99.9 8.1E-22 2.8E-26 177.7 13.6 119 371-502 9-130 (130)
15 3b7x_A FK506-binding protein 6 99.9 1.8E-22 6E-27 182.7 9.1 119 374-504 16-134 (134)
16 1yat_A FK506 binding protein; 99.9 1.1E-21 3.8E-26 171.8 13.1 107 389-503 6-113 (113)
17 3o5e_A Peptidyl-prolyl CIS-tra 99.9 1.1E-21 3.6E-26 179.8 12.3 106 391-504 37-143 (144)
18 2ppn_A FK506-binding protein 1 99.9 6.9E-22 2.4E-26 171.2 10.4 105 391-503 2-107 (107)
19 3o5q_A Peptidyl-prolyl CIS-tra 99.9 8.6E-22 2.9E-26 176.7 11.2 106 391-504 21-127 (128)
20 2y78_A Peptidyl-prolyl CIS-tra 99.9 1.5E-21 5.2E-26 176.6 12.4 112 378-502 22-133 (133)
21 3kz7_A FK506-binding protein 3 99.9 1.7E-21 5.8E-26 172.0 11.5 107 390-503 5-119 (119)
22 4dip_A Peptidyl-prolyl CIS-tra 99.9 2.3E-21 7.8E-26 172.8 11.7 109 390-506 13-125 (125)
23 1r9h_A FKB-6, FK506 binding pr 99.8 4.2E-21 1.4E-25 173.9 11.1 107 391-505 16-123 (135)
24 2vn1_A 70 kDa peptidylprolyl i 99.8 9.1E-21 3.1E-25 170.0 12.1 105 393-504 20-127 (129)
25 3uf8_A Ubiquitin-like protein 99.8 8.6E-21 2.9E-25 184.2 12.7 112 378-502 98-209 (209)
26 2lkn_A AH receptor-interacting 99.8 4.2E-21 1.4E-25 179.9 9.4 111 390-507 11-161 (165)
27 2f4e_A ATFKBP42; FKBP-like, al 99.8 1.4E-20 4.8E-25 178.7 13.0 110 391-507 51-163 (180)
28 2pbc_A FK506-binding protein 2 99.8 1.2E-20 4.2E-25 162.1 10.8 97 401-505 3-99 (102)
29 1fd9_A Protein (macrophage inf 99.8 1.2E-20 3.9E-25 183.8 11.6 112 379-505 101-212 (213)
30 3oe2_A Peptidyl-prolyl CIS-tra 99.8 1.2E-20 4.2E-25 184.2 11.6 100 391-503 119-218 (219)
31 1u79_A FKBP-type peptidyl-prol 99.8 9.5E-21 3.2E-25 170.1 8.6 104 391-502 14-128 (129)
32 2awg_A 38 kDa FK-506 binding p 99.8 5.5E-20 1.9E-24 162.4 12.3 102 391-504 15-118 (118)
33 2jwx_A FKBP38NTD, FK506-bindin 99.8 8.4E-20 2.9E-24 169.9 12.6 105 391-507 45-152 (157)
34 1q6h_A FKBP-type peptidyl-prol 99.8 1.3E-19 4.4E-24 177.7 12.1 102 391-503 123-224 (224)
35 2d9f_A FK506-binding protein 8 99.8 1.2E-19 4.2E-24 164.3 9.1 105 391-507 19-126 (135)
36 1q1c_A FK506-binding protein 4 99.8 1.8E-18 6.3E-23 174.7 13.5 107 391-505 53-160 (280)
37 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 2.8E-18 9.7E-23 182.5 10.3 107 391-505 33-140 (457)
38 2if4_A ATFKBP42; FKBP-like, al 99.7 2.8E-17 9.6E-22 168.0 12.8 112 389-507 49-163 (338)
39 3jxv_A 70 kDa peptidyl-prolyl 99.7 4.8E-17 1.6E-21 169.3 12.9 107 390-504 245-355 (356)
40 3jxv_A 70 kDa peptidyl-prolyl 99.7 9.3E-19 3.2E-23 182.2 -0.1 108 391-506 13-121 (356)
41 1fw8_A PGK P72, phosphoglycera 99.7 1.9E-17 6.4E-22 173.4 7.2 56 4-59 349-414 (416)
42 1q1c_A FK506-binding protein 4 99.6 1.7E-15 5.9E-20 153.0 11.0 105 391-509 170-279 (280)
43 1hxv_A Trigger factor; FKBP fo 99.6 5.9E-15 2E-19 129.9 7.9 89 399-503 25-113 (113)
44 3prb_A FKBP-type peptidyl-prol 99.5 2.1E-13 7.1E-18 134.1 12.3 106 404-522 2-163 (231)
45 2k8i_A SLYD, peptidyl-prolyl C 99.5 6E-13 2.1E-17 125.3 13.6 70 404-482 3-72 (171)
46 1p5q_A FKBP52, FK506-binding p 99.4 7.3E-13 2.5E-17 134.9 14.3 125 370-513 11-140 (336)
47 4dt4_A FKBP-type 16 kDa peptid 99.4 2.2E-13 7.5E-18 128.0 7.4 72 403-482 24-95 (169)
48 1ix5_A FKBP; ppiase, isomerase 99.4 1E-13 3.4E-18 128.0 4.1 85 404-503 2-98 (151)
49 2kr7_A FKBP-type peptidyl-prol 99.4 1.1E-12 3.8E-17 120.9 10.6 85 402-502 5-89 (151)
50 3pr9_A FKBP-type peptidyl-prol 99.4 7.1E-13 2.4E-17 123.2 8.1 71 404-482 2-84 (157)
51 2kfw_A FKBP-type peptidyl-prol 99.3 2E-12 6.8E-17 124.2 9.1 70 404-482 3-72 (196)
52 3cgm_A SLYD, peptidyl-prolyl C 99.2 2.7E-11 9.2E-16 112.6 8.0 78 404-503 3-80 (158)
53 1w26_A Trigger factor, TF; cha 99.1 2E-10 7E-15 122.4 8.9 89 401-505 155-243 (432)
54 1kt0_A FKBP51, 51 kDa FK506-bi 98.9 1E-08 3.6E-13 108.7 13.3 107 393-513 150-261 (457)
55 1t11_A Trigger factor, TF; hel 98.8 1.3E-09 4.5E-14 114.9 3.7 89 401-505 158-246 (392)
56 3gty_X Trigger factor, TF; cha 97.0 0.00085 2.9E-08 71.4 7.3 75 403-505 154-228 (433)
57 3tqq_A Methionyl-tRNA formyltr 69.0 10 0.00036 38.2 7.6 85 31-117 13-97 (314)
58 3q0i_A Methionyl-tRNA formyltr 61.8 13 0.00045 37.5 6.7 85 31-117 18-102 (318)
59 3rfo_A Methionyl-tRNA formyltr 61.5 8.5 0.00029 38.9 5.2 84 31-116 15-98 (317)
60 2bln_A Protein YFBG; transfera 56.3 18 0.00063 36.1 6.6 81 32-117 12-92 (305)
61 1fmt_A Methionyl-tRNA FMet for 56.3 19 0.00066 36.2 6.8 83 32-116 15-97 (314)
62 1z7e_A Protein aRNA; rossmann 26.8 73 0.0025 34.6 5.9 81 32-117 12-92 (660)
63 4fs3_A Enoyl-[acyl-carrier-pro 25.0 2.2E+02 0.0075 26.7 8.4 67 11-90 2-70 (256)
64 4g81_D Putative hexonate dehyd 20.8 1.4E+02 0.0048 28.7 6.0 65 11-90 5-70 (255)
65 2lbw_A H/ACA ribonucleoprotein 20.7 2.2E+02 0.0074 24.2 6.6 54 34-97 27-80 (121)
No 1
>3oz7_A Phosphoglycerate kinase; transferase, ATP binding, glycolysi malaria parasite; 2.70A {Plasmodium falciparum} SCOP: c.86.1.1 PDB: 1ltk_A* 3oza_A
Probab=100.00 E-value=9.1e-138 Score=1079.56 Aligned_cols=398 Identities=59% Similarity=0.954 Sum_probs=383.8
Q ss_pred CCccccccc-ccCCCEEEEEecCCCCCCC----------CcHHHHHHHHHCCCCeEEEEccCCCCCCCCCCCCChHHHHH
Q psy8371 3 LNKLSVDLL-NLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAE 71 (528)
Q Consensus 3 ~~~~ti~d~-~~~gk~VlvRvD~NvP~~~----------~~lpTI~~l~~~gak~vil~sHlGRP~g~~~~~~Sl~~~a~ 71 (528)
|+++||+|+ |++|||||||||||||+++ +++|||+||+++|||.||||||||||+|++++++||+|||+
T Consensus 5 ~~~~ti~d~~dl~gKrVlvRvD~NVP~~~g~Itdd~RI~aalpTI~~ll~~gak~Vil~SHlGRP~g~~~~~~SL~pva~ 84 (417)
T 3oz7_A 5 GNKLSISDLKDIKNKKVLVRVDFNVPIENGIIKDTNRITATLPTINHLKKEGASKIILISHCGRPDGLRNEKYTLKPVAE 84 (417)
T ss_dssp TTCCBGGGCSCCTTCEEEEECCCCCCEETTEESCCHHHHTTHHHHHHHHHHTCSEEEEECCCSCCTTSCCGGGCSHHHHH
T ss_pred ccCCchhHhhccCCCEEEEEeccCCCccCCcCCChHHHHHHHHHHHHHHHCCCCEEEEEecCCCCCCCCCCccCHHHHHH
Confidence 578999999 9999999999999999964 99999999999999878999999999998889999999999
Q ss_pred HHHHhcCCCeeEcCCCCChHHHHHhcCCCCCcEEEEecccCcccccccCCCccccccccChHHHHHHHHHHhccCCEEEe
Q psy8371 72 ELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVN 151 (528)
Q Consensus 72 ~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~illLEN~Rf~~~E~~~~~~~~~~~~~~~~~~~~~~~~~La~l~DiyVn 151 (528)
+|+++||++|+|++||+|+++++++++|++|||+||||||||+||+.++.|++++++|.+|++++.|+++||+|||+|||
T Consensus 85 ~L~~lLg~~V~f~~d~~G~~~~~~v~~l~~G~VlLLEN~RF~~eE~~~~~~~~~~~~k~~~~n~~~fa~~LA~l~DvyVN 164 (417)
T 3oz7_A 85 TLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILLENLRFHIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLADVFIN 164 (417)
T ss_dssp HHHHHHTSCCEEESCSSSHHHHHHHHHSCTTEEEEECCGGGSHHHHSEEECTTSCEEECCHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHhCCCcEECCCCCCHHHHHHHhcCCCCcEEEEccccccccccccccccccccccCChhhhHHHHHHHHhhCCEEEE
Confidence 99999999999999999999999999999999999999999999998766777889999999999999999999999999
Q ss_pred cccccccccCcccccccccccchhhhHHHHHHHHHhhhcCCCCcEEEEEcCCccchHHHHHHHHHHhhceEEEchHHHHH
Q psy8371 152 DAFGTAHRAHSSMLGEGFEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYT 231 (528)
Q Consensus 152 DAF~~aHR~haS~~g~~~~~~~aG~l~ekEl~~L~~~~~~p~rP~vailGGaKvsdKi~~i~~l~~~vD~iiigG~ma~t 231 (528)
||||||||+||||+||+++|+||||||+|||++|++++++|+|||+||+|||||||||++|+||+++||+|||||+||||
T Consensus 165 DAFgtaHRahaS~~Gi~~~~~~aG~LmekEl~~l~kal~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~t 244 (417)
T 3oz7_A 165 DAFGTAHRAHSSMVGVKLNVKASGFLMKKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRMIIGGGMAYT 244 (417)
T ss_dssp CCGGGTTSCCHHHHCCCCSCEEECHHHHHHHHHHHHHHTSCCSSEEEEEECSCSTTSHHHHHHHHTTCSEEEEETTHHHH
T ss_pred CcchhhhhccCcccccccccccccHHHHHHHHHHHHHHcCCCCceEEEEeCccHHHHHHHHHHHHHhcCEEEeccHHHHH
Confidence 99999999999999999767999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCccccCCcchHHHHHHHHHHHhCCCeEEeeeeEEEeccccCCCceeeeeccCCCCCCCcccccChhHHHH
Q psy8371 232 FLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVPDGWMGLDIGPKSREL 311 (528)
Q Consensus 232 Fl~a~~g~~ig~s~~e~~~~~~a~~~~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti~~ 311 (528)
||+|.||++||+|++|++.++.|++|+++|+++|++|+||+|++|+++|+.++++.+++..++||+|||+|||||+|++.
T Consensus 245 Fl~A~~G~~iG~Sl~e~d~~~~a~~il~~a~~~g~~i~LPvD~vva~~f~~~a~~~~~~~~~~Ip~~~m~lDiGp~T~~~ 324 (417)
T 3oz7_A 245 FKKVLNNMKIGTSLFDEAGSKIVGEIMEKAKAKNVQIFLPVDFKIADNFDNNANTKFVTDEEGIPDNWMGLDAGPKSIEN 324 (417)
T ss_dssp HHHHHHCCCBTTSCCCTTTHHHHHHHHHHHHHTTCEEECCSEEEEESSSSTTSCEEEEESSSCBCTTCEEEEECHHHHHH
T ss_pred HHHHHcCCccCchhcCccChHHHHHHHHHHHHcCCEEECCceeEEeecccCCCCeEEecccccCCCCCeeeecCHHHHHH
Confidence 99985699999999999999999999999999999999999999999999999988873236899999999999999999
Q ss_pred HHHHHccCCeEEEeCCcccccccchhHHHHHHHHHHHhhhcCCceEEEecCchHHHhhhcCCcCCcceeecCCCcchhhh
Q psy8371 312 FKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELL 391 (528)
Q Consensus 312 ~~~~i~~a~ti~wnGP~GvfE~~~F~~GT~~i~~aia~~~~~~~~sIiGGGdt~aa~~~~g~~~~~s~vSTgGGA~le~L 391 (528)
|+++|++|+||||||||||||+++|+.||++++++++++++++++||+|||||++|++++|+.++++|+||||||+|++|
T Consensus 325 ~~~~i~~akTIvWNGP~GvFE~~~Fa~GT~~va~aia~~t~~~a~sIvGGGDt~aav~~~g~~d~~shiSTGGGA~Le~L 404 (417)
T 3oz7_A 325 YKDVILTSKTVIWNGPQGVFEMPNFAKGSIECLNLVVEVTKKGAITIVGGGDTASLVEQQNKKNEISHVSTGGGASLELL 404 (417)
T ss_dssp HHHHHHTCSEEEEESCSBCTTSSTTTHHHHHHHHHHHHHHHHTCEEEECSHHHHHHHHHTTCGGGSSEECSCSHHHHHHH
T ss_pred HHHHHHhCCEEEEECCCccccccchhHHHHHHHHHHHhhccCCCEEEEcCcHHHHHHHHcCCcCCccEEcCChHHHHHHH
Confidence 99999999999999999999999999999999999999887789999999999999999999999999999999999999
Q ss_pred hhhccccCC
Q psy8371 392 EGKIKEKGF 400 (528)
Q Consensus 392 ~~k~Lp~g~ 400 (528)
+||.||+..
T Consensus 405 eGk~LPgv~ 413 (417)
T 3oz7_A 405 EGKELPGVL 413 (417)
T ss_dssp TTCCCHHHH
T ss_pred cCCCCccee
Confidence 999999865
No 2
>1vpe_A Phosphoglycerate kinase; transferase, hyperthermostability, crystal, AMP-PNP, 3-PGA; HET: ANP 3PG; 2.00A {Thermotoga maritima} SCOP: c.86.1.1
Probab=100.00 E-value=3.4e-135 Score=1054.91 Aligned_cols=380 Identities=49% Similarity=0.834 Sum_probs=365.5
Q ss_pred CcccccccccCCCEEEEEecCCCCCCC----------CcHHHHHHHHHCCCCeEEEEccCCCCCCCCCCCCChHHHHHHH
Q psy8371 4 NKLSVDLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEEL 73 (528)
Q Consensus 4 ~~~ti~d~~~~gk~VlvRvD~NvP~~~----------~~lpTI~~l~~~gak~vil~sHlGRP~g~~~~~~Sl~~~a~~L 73 (528)
+++||+|+|++||||||||||||||++ +++|||+||+++||| |||+||||||+|++++++||+|||++|
T Consensus 1 ~k~ti~d~dl~gKrVlvRvD~NVPl~~g~Itdd~RI~a~lpTI~~ll~~gak-vil~SHlGRPkg~~~~~~SL~pva~~L 79 (398)
T 1vpe_A 1 EKMTIRDVDLKGKRVIMRVDFNVPVKDGVVQDDTRIRAALPTIKYALEQGAK-VILLSHLGRPKGEPSPEFSLAPVAKRL 79 (398)
T ss_dssp CBCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCE-EEEECCCSCCCSSCCGGGCSHHHHHHH
T ss_pred CCCcccccCcCCCEEEEEecCCCcccCCccCChHHHHHHHHHHHHHHHCCCE-EEEEccCCCCCCCcCCccCHHHHHHHH
Confidence 358999999999999999999999964 999999999999998 999999999999888999999999999
Q ss_pred HHhcCCCeeEcCCCCChHHHHHhcCCCCCcEEEEecccCcccccccCCCccccccccChHHHHHHHHHHhccCCEEEecc
Q psy8371 74 KTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDA 153 (528)
Q Consensus 74 ~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~illLEN~Rf~~~E~~~~~~~~~~~~~~~~~~~~~~~~~La~l~DiyVnDA 153 (528)
+++||++|.|++||+|+++++++++|++|||+||||||||+||+++ + +.|+++||+|||+|||||
T Consensus 80 ~~lLg~~V~f~~d~~G~~~~~~v~~l~~G~VlLLEN~RF~~~E~~n--d-------------~~fa~~LA~l~DvyVNDA 144 (398)
T 1vpe_A 80 SELLGKEVKFVPAVVGDEVKKAVEELKEGEVLLLENTRFHPGETKN--D-------------PELAKFWASLADIHVNDA 144 (398)
T ss_dssp HHHHTSCCEEESCSSSHHHHHHHHTCCTTEEEEECCGGGSTHHHHT--C-------------HHHHHHHHTTCSEEEECC
T ss_pred HHHHCCCceeCCCCCCHHHHHHHhcCCCCeEEEEcccCCCcchhcC--C-------------HHHHHHHHhhCCEEEecc
Confidence 9999999999999999999999999999999999999999999853 2 379999999999999999
Q ss_pred cccccccCccccccc-ccccchhhhHHHHHHHHHhhhcCCCCcEEEEEcCCccchHHHHHHHHHHhhceEEEchHHHHHH
Q psy8371 154 FGTAHRAHSSMLGEG-FEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232 (528)
Q Consensus 154 F~~aHR~haS~~g~~-~~~~~aG~l~ekEl~~L~~~~~~p~rP~vailGGaKvsdKi~~i~~l~~~vD~iiigG~ma~tF 232 (528)
||+|||+||||+||+ +.|+|||+||+|||++|++++++|+||++||+|||||||||++|+||+++||+|||||+|||||
T Consensus 145 FgtaHRahaS~~gi~~~lps~aG~LmekEl~~l~k~l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~tF 224 (398)
T 1vpe_A 145 FGTAHRAHASNVGIAQFIPSVAGFLMEKEIKFLSKVTYNPEKPYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFTF 224 (398)
T ss_dssp GGGTTSCCTTTTGGGGTSCEEECHHHHHHHHHHHHHHHCCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECTTTHHHH
T ss_pred ccccccccCchhhhhhhhhhhccHHHHHHHHHHHHHhcCCCCCeEEEEcCcchhhHHHHHHHHHHhcCeeEeCcHHHHHH
Confidence 999999999999998 4478999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCccccCCcchHHHHHHHHHHHhCCCeEEeeeeEEEeccccCCCceeeee-ccCCCCCCCcccccChhHHHH
Q psy8371 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEAT-VESGVPDGWMGLDIGPKSREL 311 (528)
Q Consensus 233 l~a~~g~~ig~s~~e~~~~~~a~~~~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~-~~~~i~~~~~~~DIGp~Ti~~ 311 (528)
|+| ||++||+|++|++.++.|++|+++|+++|++|+||+|++|+++|+.++++.+++ . ++||+|||+|||||+|++.
T Consensus 225 l~A-~G~~iG~SL~E~d~~~~a~~ll~ka~~~g~~i~lPvD~vva~~f~~~a~~~~~~~~-~~ip~~~m~lDIGp~T~~~ 302 (398)
T 1vpe_A 225 LKA-LGKEVGSSRVEEDKIDLAKELVEKAKEKGVEIVLPVDAVIAQKIEPGVEKKVVRID-DGIPEGWMGLDIGPETIEL 302 (398)
T ss_dssp HHH-TSCCCTTSCCCGGGHHHHHHHHHHHHHTTCEEECCSEEEEESSCSTTCCCEEEETT-TCCCTTCEEEEECHHHHHH
T ss_pred HHH-cCCCCCchhcChhhHHHHHHHHHHHHhcCCEEECCceeehhhcccCCCCeEEeccc-ccCCCCCEeeecCHHHHHH
Confidence 999 999999999999999999999999999999999999999999999999888887 5 5899999999999999999
Q ss_pred HHHHHccCCeEEEeCCcccccccchhHHHHHHHHHHHhhhcCCceEEEecCchHHHhhhcCCcCCcceeecCCCcchhhh
Q psy8371 312 FKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELL 391 (528)
Q Consensus 312 ~~~~i~~a~ti~wnGP~GvfE~~~F~~GT~~i~~aia~~~~~~~~sIiGGGdt~aa~~~~g~~~~~s~vSTgGGA~le~L 391 (528)
|+++|++|+||||||||||||+++|+.||++++++++++++.+++||+|||||++|++++|+.++++|+||||||+|++|
T Consensus 303 ~~~~i~~akTivWNGPmGvFE~~~Fa~GT~~va~aia~~t~~~~~sivGGGDt~aav~~~g~~d~~shiSTGGGA~Le~L 382 (398)
T 1vpe_A 303 FKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTEKGAITVVGGGDSAAAVNKFGLEDKFSHVSTGGGASLEFL 382 (398)
T ss_dssp HHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHTTCEEEEESHHHHHHHHHTTCGGGSSEEESCHHHHHHHH
T ss_pred HHHHHhhCCEEEEECCcccccCchHHHHHHHHHHHHHhhccCCCEEEECCcHHHHHHHHcCCcCCccEEeCChHHHHHHH
Confidence 99999999999999999999999999999999999999765557999999999999999999999999999999999999
Q ss_pred hhhccccCCC
Q psy8371 392 EGKIKEKGFG 401 (528)
Q Consensus 392 ~~k~Lp~g~G 401 (528)
+||.||+...
T Consensus 383 eGk~LPgv~a 392 (398)
T 1vpe_A 383 EGKELPGIAS 392 (398)
T ss_dssp TSSCCHHHHT
T ss_pred cCCCCcHHHH
Confidence 9999999764
No 3
>1php_A 3-phosphoglycerate kinase; HET: ADP; 1.65A {Geobacillus stearothermophilus} SCOP: c.86.1.1 PDB: 3b2b_A* 3uwd_A*
Probab=100.00 E-value=3.5e-135 Score=1053.67 Aligned_cols=379 Identities=46% Similarity=0.833 Sum_probs=364.0
Q ss_pred CCcccccccccCCCEEEEEecCCCCCCC----------CcHHHHHHHHHCCCCeEEEEccCCCCCCCCCCCCChHHHHHH
Q psy8371 3 LNKLSVDLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEE 72 (528)
Q Consensus 3 ~~~~ti~d~~~~gk~VlvRvD~NvP~~~----------~~lpTI~~l~~~gak~vil~sHlGRP~g~~~~~~Sl~~~a~~ 72 (528)
|+++||+|+|++|||||||||||||+++ +++|||+||+++||| |||+||||||+|++++++||+|||++
T Consensus 1 m~k~ti~d~dl~gKrVlvRvD~NVPl~~g~Itdd~RI~aalpTI~~ll~~gak-vil~SHlGRPkg~~~~~~SL~pva~~ 79 (394)
T 1php_A 1 MNKKTIRDVDVRGKRVFCRVDFNVPMEQGAITDDTRIRAALPTIRYLIEHGAK-VILASHLGRPKGKVVEELRLDAVAKR 79 (394)
T ss_dssp CCBCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCE-EEEECCCSCCCSSCCGGGCSHHHHHH
T ss_pred CCCCcccccCcCCCEEEEEecCCCcccCCccCChHHHHHHHHHHHHHHHCCCE-EEEEecCCCCCCCCCCccCHHHHHHH
Confidence 3468999999999999999999999964 999999999999998 99999999999988899999999999
Q ss_pred HHHhcCCCeeEcCCCCChHHHHHhcCCCCCcEEEEecccCcccccccCCCccccccccChHHHHHHHHHHhccCCEEEec
Q psy8371 73 LKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVND 152 (528)
Q Consensus 73 L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~illLEN~Rf~~~E~~~~~~~~~~~~~~~~~~~~~~~~~La~l~DiyVnD 152 (528)
|+++||++|.|++||+|+++++++++|++|||+||||||||+||+++ | +.|+++||+|||+||||
T Consensus 80 L~~lLg~~V~f~~d~~G~~~~~~v~~l~~G~VlLLEN~RF~~~E~~n--d-------------~~fa~~LA~l~DvyVND 144 (394)
T 1php_A 80 LGELLERPVAKTNEAVGDEVKAAVDRLNEGDVLLLENVRFYPGEEKN--D-------------PELAKAFAELADLYVND 144 (394)
T ss_dssp HHHHHTSCCEECSCSSSHHHHHHHHTCCTTCEEECCCGGGSHHHHHT--C-------------HHHHHHHHTTCSEEEEC
T ss_pred HHHHHCCCceECCCcCCHHHHHHHhcCCCCeEEEEcccCCCcchhhC--C-------------HHHHHHHHhhCCEEEec
Confidence 99999999999999999999999999999999999999999999853 2 37999999999999999
Q ss_pred ccccccccCccccccc-ccccchhhhHHHHHHHHHhhhcCCCCcEEEEEcCCccchHHHHHHHHHHhhceEEEchHHHHH
Q psy8371 153 AFGTAHRAHSSMLGEG-FEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYT 231 (528)
Q Consensus 153 AF~~aHR~haS~~g~~-~~~~~aG~l~ekEl~~L~~~~~~p~rP~vailGGaKvsdKi~~i~~l~~~vD~iiigG~ma~t 231 (528)
|||+|||+||||+||+ +.|+|||+||+|||++|++++++|+||++||+|||||||||++|+||+++||+|||||+||||
T Consensus 145 AFgtaHRahaS~~gi~~~lp~~aG~Lm~kEl~~l~kal~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~t 224 (394)
T 1php_A 145 AFGAAHRAHASTEGIAHYLPAVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIDNLLEKVDNLIIGGGLAYT 224 (394)
T ss_dssp CGGGTTSCCTTTTGGGGTSCEEECHHHHHHHHHHHHHHHSCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECTTHHHH
T ss_pred cccccccccCchhhhhhhhhhhhcHHHHHHHHHHHHHhcCCCCCeEEEEcCcchhhHHHHHHHHHHhcCeeeeCcHHHHH
Confidence 9999999999999998 447899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCccccCCcchHHHHHHHHHHHhCCCeEEeeeeEEEeccccCCCceeeeeccCCCCCCCcccccChhHHHH
Q psy8371 232 FLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVPDGWMGLDIGPKSREL 311 (528)
Q Consensus 232 Fl~a~~g~~ig~s~~e~~~~~~a~~~~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti~~ 311 (528)
||+| ||++||+|++|++.++.|++|+++|+++|++|+||+|++|+++|+.++++.+++. ++||+|||+|||||+|++.
T Consensus 225 Fl~A-~G~~iG~SL~E~d~~~~a~~ll~~a~~~g~~i~lPvD~vva~~f~~~a~~~~~~~-~~ip~~~m~lDiGp~T~~~ 302 (394)
T 1php_A 225 FVKA-LGHDVGKSLLEEDKIELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANTKVVPI-DAIPADWSALDIGPKTREL 302 (394)
T ss_dssp HHHH-TTCCCTTSCCCGGGHHHHHHHHHHHHHHTCEEECCSEEEEESSSSTTSCEEEEEG-GGCCTTCEEEEECHHHHHH
T ss_pred HHHH-cCCCCCccccchhhHHHHHHHHHHHHhcCCEEECCcchhhhhccCCCCceEEeeh-hcCCCCCEeeecCHHHHHH
Confidence 9999 9999999999999999999999999999999999999999999999999888875 5799999999999999999
Q ss_pred HHHHHccCCeEEEeCCcccccccchhHHHHHHHHHHHhhhcCCceEEEecCchHHHhhhcCCcCCcceeecCCCcchhhh
Q psy8371 312 FKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELL 391 (528)
Q Consensus 312 ~~~~i~~a~ti~wnGP~GvfE~~~F~~GT~~i~~aia~~~~~~~~sIiGGGdt~aa~~~~g~~~~~s~vSTgGGA~le~L 391 (528)
|+++|++|+||||||||||||+++|+.||++++++++++ .+++||+|||||++|++++|+.++++|+||||||+|++|
T Consensus 303 ~~~~i~~akTivWNGPmGvFE~~~Fa~GT~~va~aia~~--~~~~sivGGGDt~aav~~~g~~d~~shiSTGGGA~Le~L 380 (394)
T 1php_A 303 YRDVIRESKLVVWNGPMGVFEMDAFAHGTKAIAEALAEA--LDTYSVIGGGDSAAAVEKFGLADKMDHISTGGGASLEFM 380 (394)
T ss_dssp HHHHHHTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHC--TTCEEEECSHHHHHHHHHTTCGGGSSEECSCTHHHHHHH
T ss_pred HHHHHhhCCEEEEeCCcccccCchHHHHHHHHHHHHHhc--CCCEEEECChHHHHHHHHcCCCCCccEEeCChHHHHHHH
Confidence 999999999999999999999999999999999999984 356999999999999999999999999999999999999
Q ss_pred hhhccccCCC
Q psy8371 392 EGKIKEKGFG 401 (528)
Q Consensus 392 ~~k~Lp~g~G 401 (528)
+||.||+...
T Consensus 381 eGk~LPgv~a 390 (394)
T 1php_A 381 EGKQLPGVVA 390 (394)
T ss_dssp TTCCCHHHHT
T ss_pred cCCCcchHHH
Confidence 9999998754
No 4
>2wzb_A Phosphoglycerate kinase 1; hereditary hemolytic anemia, transferase, phosphoprotein, KI glycolysis, nucleotide-binding; HET: ADP 3PG; 1.47A {Homo sapiens} PDB: 2wzc_A* 2x13_A* 2x15_A* 2xe6_A* 2xe7_A* 2xe8_A* 2ybe_A* 3c3b_A* 2zgv_A* 3c3a_A* 3c39_A* 3c3c_A* 2wzd_A* 2x14_A* 2y3i_A* 1vjd_A* 1vjc_A* 1kf0_A* 1hdi_A* 2p9t_A* ...
Probab=100.00 E-value=2.9e-135 Score=1060.46 Aligned_cols=395 Identities=70% Similarity=1.113 Sum_probs=368.9
Q ss_pred CcccccccccCCCEEEEEecCCCCCCC----------CcHHHHHHHHHCCCCeEEEEccCCCCCCCCC-CCCChHHHHHH
Q psy8371 4 NKLSVDLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHLGRPDGSKN-LKYSLKPVAEE 72 (528)
Q Consensus 4 ~~~ti~d~~~~gk~VlvRvD~NvP~~~----------~~lpTI~~l~~~gak~vil~sHlGRP~g~~~-~~~Sl~~~a~~ 72 (528)
+++||+|+|++|||||||||||||+++ +++|||+||+++|||.||||||||||+|+++ +++||+|||++
T Consensus 4 ~k~ti~d~dl~gKrVlvRvD~NVPl~~g~Itdd~RI~aalpTIk~ll~~gak~Vil~SHlGRPkg~~~~~~~SL~pva~~ 83 (416)
T 2wzb_A 4 NKLTLDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLEPVAVE 83 (416)
T ss_dssp TBCBGGGCCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCCHHHHCSHHHHHH
T ss_pred CCCcccccCcCCCEEEEEecCCCcccCCccCChHHHHHHHHHHHHHHHCCCCEEEEEecCCCCCCCCCccccCHHHHHHH
Confidence 468999999999999999999999963 9999999999999986899999999999877 89999999999
Q ss_pred HHHhcCCCeeEcCCCCChHHHHHhcCCCCCcEEEEecccCcccccccCCCccccccccChHHHHHHHHHHhccCCEEEec
Q psy8371 73 LKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVND 152 (528)
Q Consensus 73 L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~illLEN~Rf~~~E~~~~~~~~~~~~~~~~~~~~~~~~~La~l~DiyVnD 152 (528)
|+++||++|+|++||+|+++++++++|++|||+||||||||+||+.+.++.+.++.+++|+++..|+++||+|||+||||
T Consensus 84 L~~lLg~~V~f~~d~~G~~~~~~v~~l~~G~VlLLEN~RF~~~E~~~~~~~~~~~~knd~e~~~~fa~~LA~l~DvyVND 163 (416)
T 2wzb_A 84 LKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVND 163 (416)
T ss_dssp HHHHHTSCCEECSCSSSHHHHHHHHSCCTTEEEECCCGGGSHHHHTCC----------CHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHCCCCeeCCccCCHHHHHHHhcCCCCcEEEecccccchhhcccccccccccccCCHHHHHHHHHHHHhhCCEEEec
Confidence 99999999999999999999999999999999999999999999953222112234667877777999999999999999
Q ss_pred ccccccccCccccccc-ccccchhhhHHHHHHHHHhhhcCCCCcEEEEEcCCccchHHHHHHHHHHhhceEEEchHHHHH
Q psy8371 153 AFGTAHRAHSSMLGEG-FEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYT 231 (528)
Q Consensus 153 AF~~aHR~haS~~g~~-~~~~~aG~l~ekEl~~L~~~~~~p~rP~vailGGaKvsdKi~~i~~l~~~vD~iiigG~ma~t 231 (528)
|||||||+||||+||+ +.| ||||||+|||++|++++++|+|||+||+|||||||||++|+||+++||+|||||+||||
T Consensus 164 AFgtaHRahaS~~gi~~~lp-~aG~Lm~kEl~~l~kal~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~T 242 (416)
T 2wzb_A 164 AFGTAHRAHSSMVGVNLPQK-AGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFT 242 (416)
T ss_dssp CGGGTTCCCHHHHCCCCSCE-EECHHHHHHHHHHHHHHHSCCSSEEEEECSSCHHHHGGGHHHHTTTCSEEEECGGGHHH
T ss_pred ccccchhhccchhhhhhcch-hhhHHHHHHHHHHHHHhcCCCCCeEEEEcCcchhhHHHHHHHHHHhcCeeeeChHHHHH
Confidence 9999999999999998 446 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCC-CCccccCCcchHHHHHHHHHHHhCCCeEEeeeeEEEeccccCCCceee-eeccCCCCCCCcccccChhHH
Q psy8371 232 FLKELKGMN-IGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGE-ATVESGVPDGWMGLDIGPKSR 309 (528)
Q Consensus 232 Fl~a~~g~~-ig~s~~e~~~~~~a~~~~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~-~~~~~~i~~~~~~~DIGp~Ti 309 (528)
||+| ||++ ||+|++|++.++.|++|+++|+++|++|+||+|++|+++|+.++++.+ ++. ++||+|||+|||||+|+
T Consensus 243 Fl~A-~G~~~iG~Sl~E~d~~~~a~~ll~ka~~~g~~i~lPvD~vva~~f~~~a~~~~~~~~-~~Ip~~~m~lDiGp~T~ 320 (416)
T 2wzb_A 243 FLKV-LNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVA-SGIPAGWMGLDCGPESS 320 (416)
T ss_dssp HHHH-HHCCCCTTSCCCHHHHTTHHHHHHHHHHTTCEEECCCEEEEESSSSTTCCEEEEETT-TCCCTTCEEEEECHHHH
T ss_pred HHHH-cCCCcccchhcChhhHHHHHHHHHHHHHcCCEEECCcchhhhhccCCCCCeEEecch-hcCCCCCeeeecCHHHH
Confidence 9999 9999 999999999999999999999999999999999999999999998887 664 58999999999999999
Q ss_pred HHHHHHHccCCeEEEeCCcccccccchhHHHHHHHHHHHhhhcCCceEEEecCchHHHhhhcCCcCCcceeecCCCcchh
Q psy8371 310 ELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLE 389 (528)
Q Consensus 310 ~~~~~~i~~a~ti~wnGP~GvfE~~~F~~GT~~i~~aia~~~~~~~~sIiGGGdt~aa~~~~g~~~~~s~vSTgGGA~le 389 (528)
+.|+++|++|+||||||||||||+++|+.||++++++++++++.+++||+|||||++|++++|+.++++|+||||||+|+
T Consensus 321 ~~~~~~i~~akTIvWNGPmGvFE~~~Fa~GT~~va~aia~~t~~~a~sIvGGGDt~aav~~~g~~d~~shiSTGGGA~Le 400 (416)
T 2wzb_A 321 KKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLE 400 (416)
T ss_dssp HHHHHHHHHCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHTTCEEEEESTTHHHHHHHTTCTTSSSEEESCSHHHHH
T ss_pred HHHHHHHhhCCEEEEECCCcccccchHHHHHHHHHHHHHhhccCCCEEEEcCcHHHHHHHHcCCCCCceEEeCchHHHHH
Confidence 99999999999999999999999999999999999999997766789999999999999999999999999999999999
Q ss_pred hhhhhccccCCC
Q psy8371 390 LLEGKIKEKGFG 401 (528)
Q Consensus 390 ~L~~k~Lp~g~G 401 (528)
+|+||.||+...
T Consensus 401 ~LEGk~LPgv~a 412 (416)
T 2wzb_A 401 LLEGKVLPGVDA 412 (416)
T ss_dssp HHHTCCCHHHHT
T ss_pred HHcCCCccHHHH
Confidence 999999998753
No 5
>1qpg_A PGK, 3-phosphoglycerate kinase; phosphotransferase (carboxyl acceptor), acetylation, glycolysis; HET: MAP 3PG; 2.40A {Saccharomyces cerevisiae} SCOP: c.86.1.1 PDB: 3pgk_A*
Probab=100.00 E-value=9.8e-135 Score=1056.21 Aligned_cols=394 Identities=61% Similarity=0.971 Sum_probs=371.1
Q ss_pred CcccccccccCCCEEEEEecCCCCCCC----------CcHHHHHHHHHCCCCeEEEEccCCCCCCCCCCCCChHHHHHHH
Q psy8371 4 NKLSVDLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEEL 73 (528)
Q Consensus 4 ~~~ti~d~~~~gk~VlvRvD~NvP~~~----------~~lpTI~~l~~~gak~vil~sHlGRP~g~~~~~~Sl~~~a~~L 73 (528)
+++||+|+|++||||||||||||||++ +++|||+||+++|||.||||||||||+|++++++||+|||++|
T Consensus 4 ~k~ti~d~dl~gKrVlvRvD~NVPl~~g~Itdd~RI~aalpTIk~ll~~gak~Vil~SHlGRP~g~~~~~~SL~pva~~L 83 (415)
T 1qpg_A 4 SKLSVQDLDLKDKRVFIRVDFNVPLDGKKITSNQRIVAALPTIKYVLEHHPRYVVLASHLGQPNGERNEKYSLAPVAKEL 83 (415)
T ss_dssp SBCBGGGCCCTTCEEEEECCCCCCBSSSSBSCCHHHHHHHHHHHHHHTTCCSEEEEECCCSCCCSSCCGGGCSHHHHHHH
T ss_pred CCCcccccCcCCCEEEEEecCCCcccCCccCChHHHHHHHHHHHHHHHCCCCEEEEEecCCCCCCCCCCccCHHHHHHHH
Confidence 468999999999999999999999974 9999999999999986899999999999888999999999999
Q ss_pred HHhcCCCeeEcCCCCChHHHHHhcCCCCCcEEEEecccCcccccccCCCccccccccChHHHHHHHHHHhccCCEEEecc
Q psy8371 74 KTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDA 153 (528)
Q Consensus 74 ~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~illLEN~Rf~~~E~~~~~~~~~~~~~~~~~~~~~~~~~La~l~DiyVnDA 153 (528)
+++||++|+|++||+|+++++++++|++|||+||||||||+||++...+ ..++.+++|+++..|+++||+|||+|||||
T Consensus 84 ~~lLg~~V~f~~d~~G~~~~~~v~~l~~G~VlLLEN~RF~~~E~g~~~~-~~~~~knd~~~~~~fa~~LA~l~DvyVNDA 162 (415)
T 1qpg_A 84 QSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEEEGSRKV-DGQKVKASKEDVQKFRHELSSLADVYINDA 162 (415)
T ss_dssp HHHHTSCCEEESCSSSHHHHHHHHTCCTTEEEEECCGGGSHHHHTEEEE-TTEEEECCHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHCCCceeCCCcCCHHHHHHHhcCCCCeEEEeccCccChhhcccccc-ccchhccCHHHHHHHHHHHHhhCCEEEecc
Confidence 9999999999999999999999999999999999999999999832000 012235677777779999999999999999
Q ss_pred cccccccCccccccc-ccccchhhhHHHHHHHHHhhhcCCCCcEEEEEcCCccchHHHHHHHHHHhhceEEEchHHHHHH
Q psy8371 154 FGTAHRAHSSMLGEG-FEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232 (528)
Q Consensus 154 F~~aHR~haS~~g~~-~~~~~aG~l~ekEl~~L~~~~~~p~rP~vailGGaKvsdKi~~i~~l~~~vD~iiigG~ma~tF 232 (528)
||||||+||||+||+ +.| |||+||+|||++|++++++|+|||+||+|||||||||++|+||+++||+|||||+|||||
T Consensus 163 FgtaHRahaS~~gi~~~lp-~aG~Lm~kEl~~l~kal~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~TF 241 (415)
T 1qpg_A 163 FGTAHRAHSSMVGFDLPQR-AAGFLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTF 241 (415)
T ss_dssp GGGTTSCCHHHHCCCCSCE-EECHHHHHHHHHHHHHHSSCCSSEEEEECSSCSGGGHHHHHHHTTTCSEEEECGGGHHHH
T ss_pred hhhchhhcCcccchhhccc-cccHHHHHHHHHHHHHhcCCCCCeEEEEcCcchhhHHHHHHHHHHhcCEEEeChHHHHHH
Confidence 999999999999998 446 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCC-CCccccCCcchHHHHHHHHHHHhCCCeEEeeeeEEEeccccCCCceee-eeccCCCCCCCcccccChhHHH
Q psy8371 233 LKELKGMN-IGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGE-ATVESGVPDGWMGLDIGPKSRE 310 (528)
Q Consensus 233 l~a~~g~~-ig~s~~e~~~~~~a~~~~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~-~~~~~~i~~~~~~~DIGp~Ti~ 310 (528)
|+| ||++ ||+|++|++.++.|++|+++|+++|++|+||+|++|+++|+.++++.+ ++. ++||+|||+|||||+|++
T Consensus 242 l~A-~G~~~iG~Sl~E~d~~~~a~~ll~ka~~~g~~i~lPvD~vva~~f~~~a~~~~~~~~-~~Ip~~~m~lDiGp~T~~ 319 (415)
T 1qpg_A 242 KKV-LENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDK-EGIPAGWQGLDNGPESRK 319 (415)
T ss_dssp HHH-HSCCCCCSCCCCHHHHHHHHHHHHHHHHHTCEEECCSEEEEESSSSSSCCCCEEETT-TCCCTTCEEEEECHHHHH
T ss_pred HHH-cCCCcccchhcChhhHHHHHHHHHHHHHcCCEEECCcchhhhhccCCCCCeEEecch-hcCCCCCeeeccCHHHHH
Confidence 999 9999 999999999999999999999999999999999999999999998877 664 589999999999999999
Q ss_pred HHHHHHccCCeEEEeCCcccccccchhHHHHHHHHHHHhhhcCCceEEEecCchHHHhhhcCCcCCcceeecCCCcchhh
Q psy8371 311 LFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLEL 390 (528)
Q Consensus 311 ~~~~~i~~a~ti~wnGP~GvfE~~~F~~GT~~i~~aia~~~~~~~~sIiGGGdt~aa~~~~g~~~~~s~vSTgGGA~le~ 390 (528)
.|+++|++|+||||||||||||+++|+.||++++++++++++.+++||+|||||++|++++|+.++++|+||||||+|++
T Consensus 320 ~~~~~i~~akTIvWNGPmGvFE~~~Fa~GT~~va~aia~~t~~~a~sIvGGGDt~aav~~~g~~d~~shiSTGGGA~Le~ 399 (415)
T 1qpg_A 320 LFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLEL 399 (415)
T ss_dssp HHHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHHTCEEEECCHHHHHHHHHTTCGGGSSEECCCTHHHHHH
T ss_pred HHHHHHhhCCEEEEeCCccccccchHHHHHHHHHHHHHhhccCCCEEEECCcHHHHHHHHcCCCCCceEEeCChHHHHHH
Confidence 99999999999999999999999999999999999999976557899999999999999999999999999999999999
Q ss_pred hhhhccccCCC
Q psy8371 391 LEGKIKEKGFG 401 (528)
Q Consensus 391 L~~k~Lp~g~G 401 (528)
|+||.||+...
T Consensus 400 LEGk~LPgv~a 410 (415)
T 1qpg_A 400 LEGKELPGVAF 410 (415)
T ss_dssp HTSCCCHHHHT
T ss_pred HcCCCCchHHH
Confidence 99999999764
No 6
>16pk_A PGK, 3-phosphoglycerate kinase; ternary complex, glycolysis, transferase, bisubstrate, analog; HET: BIS EPE; 1.60A {Trypanosoma brucei} SCOP: c.86.1.1 PDB: 13pk_A*
Probab=100.00 E-value=3.8e-134 Score=1050.28 Aligned_cols=381 Identities=45% Similarity=0.750 Sum_probs=363.6
Q ss_pred cccccccccCCCEEEEEecCCCCCCC----------CcHHHHHHHHHCCCCeEEEEccCCCCCCCC--------------
Q psy8371 5 KLSVDLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHLGRPDGSK-------------- 60 (528)
Q Consensus 5 ~~ti~d~~~~gk~VlvRvD~NvP~~~----------~~lpTI~~l~~~gak~vil~sHlGRP~g~~-------------- 60 (528)
++||+|+|++||||||||||||||++ +++|||+||+++||| ||||||||||+|++
T Consensus 2 k~ti~d~dl~gKrVlvRvD~NVPl~~g~Itdd~RI~aalpTI~~ll~~Gak-vil~SHlGRPkg~~~~~~~~~~~~~~~~ 80 (415)
T 16pk_A 2 KKSINECDLKGKKVLIRVDFNVPVKNGKITNDYRIRSALPTLKKVLTEGGS-CVLMSHLGRPKGIPMAQAGKIRSTGGVP 80 (415)
T ss_dssp BCBGGGSCCTTCEEEEEECCCCCEETTEESCCHHHHHHHHHHHHHHHTTCE-EEEECCCSCCCCBCGGGHHHHHHTTCCT
T ss_pred CCcccccCcCCCEEEEEeccCCcccCCccCchHHHHHHHHHHHHHHHCCCE-EEEEecCCCCCCcccccccccccccccc
Confidence 57999999999999999999999964 999999999999998 99999999999975
Q ss_pred --CCCCChHHHHHHHHHhcCCCeeEcCCCCChHHHHHhcCCCCCcEEEEecccCcccccccCCCccccccccChHHHHHH
Q psy8371 61 --NLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKF 138 (528)
Q Consensus 61 --~~~~Sl~~~a~~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~illLEN~Rf~~~E~~~~~~~~~~~~~~~~~~~~~~ 138 (528)
++++||+|||++|+++||++|+|++||+|++++ |++|++|||+||||||||+||+++ ++++++.|
T Consensus 81 ~~~~~~SL~pva~~Ls~lLg~~V~f~~d~~G~~~~--v~~l~~G~VlLLEN~RF~~~E~~n-----------d~~e~~~f 147 (415)
T 16pk_A 81 GFQQKATLKPVAKRLSELLLRPVTFAPDCLNAADV--VSKMSPGDVVLLENVRFYKEEGSK-----------KAKDREAM 147 (415)
T ss_dssp TCCGGGCSHHHHHHHHHHHTSCCEEESCTTSCHHH--HHTCCTTCEEEECCGGGBGGGGCS-----------SHHHHHHH
T ss_pred cCCcccCHHHHHHHHHHHhCCCCeeCCccCChHHH--hhcCCCCcEEEeccccCCcccccC-----------CccccHHH
Confidence 799999999999999999999999999999998 999999999999999999999863 34455899
Q ss_pred HHHHhccCCEEEecccccccccCccccccc-ccc-cchhhhHHHHHHHHHhhhcCCCCcEEEEEcCCccchHHHHHHHHH
Q psy8371 139 RESLRKLGDIYVNDAFGTAHRAHSSMLGEG-FEQ-RASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLL 216 (528)
Q Consensus 139 ~~~La~l~DiyVnDAF~~aHR~haS~~g~~-~~~-~~aG~l~ekEl~~L~~~~~~p~rP~vailGGaKvsdKi~~i~~l~ 216 (528)
+++||+|||+|||||||+|||+|||++||+ +.| +|||+||+|||++|++++++|+||++||+|||||||||++|+||+
T Consensus 148 a~~LA~l~DvyVNDAFgtaHRahaS~~Gi~~~lp~~~aG~LmekEl~~l~k~l~~p~rP~vaIlGGaKVsdKi~vi~nLl 227 (415)
T 16pk_A 148 AKILASYGDVYISDAFGTAHRDSATMTGIPKILGNGAAGYLMEKEISYFAKVLGNPPRPLVAIVGGAKVSDKIQLLDNML 227 (415)
T ss_dssp HHHHHTTCSEEEEECGGGTTSCCTTTTHHHHHHTCCEECHHHHHHHHHHHHHHSCCCSSEEEEECSSCSGGGHHHHHHHG
T ss_pred HHHHHhhCCEEEEcccccccccccchhhhhhhcccccccHHHHHHHHHHHHHhcCCCCCeEEEEcCcchhhHHHHHHHHH
Confidence 999999999999999999999999999998 334 899999999999999999999999999999999999999999999
Q ss_pred HhhceEEEchHHHHHHHHHHcCCCCCccccCCcchHHHHHHHHHHHhCCCeEEeeeeEEEeccccCCCceeeeeccCCCC
Q psy8371 217 DKVNEMIIGGGMSYTFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVP 296 (528)
Q Consensus 217 ~~vD~iiigG~ma~tFl~a~~g~~ig~s~~e~~~~~~a~~~~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~ 296 (528)
++||+|||||+||||||+| ||++||+|++|++.++.|++|+++|+++|++|+||+|++|+++|+.++++.+++. ++||
T Consensus 228 ~kvD~liiGGgma~tFl~A-~G~~iG~Sl~E~d~~~~A~~ll~ka~~~g~~i~lPvD~vva~~f~~~a~~~~~~~-~~ip 305 (415)
T 16pk_A 228 QRIDYLLIGGAMAYTFLKA-QGYSIGKSKCEESKLEFARSLLKKAEDRKVQVILPIDHVCHTEFKAVDSPLITED-QNIP 305 (415)
T ss_dssp GGCSEEEECTTHHHHHHHH-HTCCCTTCCCCGGGHHHHHHHHHHHHHTTCEEECCSSEEEESSSSCCSSCEECSS-SCCC
T ss_pred HhcCeeEeCcHHHHHHHHH-cCCCcCccccChhhHHHHHHHHHHHHhcCCEEECCceeehhhcccCCCceEEeeh-hcCC
Confidence 9999999999999999999 9999999999999999999999999999999999999999999999998888775 5899
Q ss_pred CCCcccccChhHHHHHHHHHccCCeEEEeCCcccccccchhHHHHHHHHHHHhhhc-CCceEEEecCchHHHhhhcCCcC
Q psy8371 297 DGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTT-KGAITIIGGGDTATCAAKWNTED 375 (528)
Q Consensus 297 ~~~~~~DIGp~Ti~~~~~~i~~a~ti~wnGP~GvfE~~~F~~GT~~i~~aia~~~~-~~~~sIiGGGdt~aa~~~~g~~~ 375 (528)
+|||+|||||+|++.|+++|++|+||||||||||||+++|+.||++++++++++++ .+++||+|||||++|++++|+.+
T Consensus 306 ~~~m~lDIGp~T~~~~~~~i~~akTivWNGPmGvFE~~~Fa~GT~~va~aia~~t~~~~a~sIvGGGDt~aAv~~~G~~d 385 (415)
T 16pk_A 306 EGHMALDIGPKTIEKYVQTIGKCKSAIWNGPMGVFEMVPYSKGTFAIAKAMGRGTHEHGLMSIIGGGDSASAAELSGEAK 385 (415)
T ss_dssp TTCEEEEECHHHHHHHHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHHHCCEEEECSHHHHHHHHHTTCTT
T ss_pred CCCEEeecCHHHHHHHHHHHHhCCEEEEECCcccccCchHHHHHHHHHHHHHhccCCCCCEEEECCcHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999752 46799999999999999999999
Q ss_pred CcceeecCCCcchhhhhhhccccCCC
Q psy8371 376 KVSHVSTGGGASLELLEGKIKEKGFG 401 (528)
Q Consensus 376 ~~s~vSTgGGA~le~L~~k~Lp~g~G 401 (528)
+++|+||||||+|++|+||.||+...
T Consensus 386 ~~shiSTGGGA~Le~LeGk~LPgv~a 411 (415)
T 16pk_A 386 RMSHVSTGGGASLELLEGKTLPGVTV 411 (415)
T ss_dssp TSSEECSCHHHHHHHHTTCCCHHHHT
T ss_pred CceEEeCChHHHHHHHcCCCcchHHH
Confidence 99999999999999999999998754
No 7
>1v6s_A Phosphoglycerate kinase; riken structu genomics/proteomics initiative, RSGI, structural genomics, transferase; 1.50A {Thermus thermophilus} SCOP: c.86.1.1 PDB: 2ie8_A
Probab=100.00 E-value=9.8e-134 Score=1041.71 Aligned_cols=373 Identities=40% Similarity=0.704 Sum_probs=359.4
Q ss_pred ccccccccCCCEEEEEecCCCCCCC----------CcHHHHHHHHHCCCCeEEEEccCCCCCCCCCCCCChHHHHHHHHH
Q psy8371 6 LSVDLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEELKT 75 (528)
Q Consensus 6 ~ti~d~~~~gk~VlvRvD~NvP~~~----------~~lpTI~~l~~~gak~vil~sHlGRP~g~~~~~~Sl~~~a~~L~~ 75 (528)
+||+|+|++|||||||||||||+++ +++|||+||+++||| |||+||||||+| +++++||+|||++|++
T Consensus 2 ~ti~d~dl~gKrVlvRvD~NVPl~~g~Itdd~RI~aalpTI~~ll~~gak-vil~SHlGRPkg-~~~~~SL~pva~~L~~ 79 (390)
T 1v6s_A 2 RTLLDLDPKGKRVLVRVDYNVPVQDGKVQDETRILESLPTLRHLLAGGAS-LVLLSHLGRPKG-PDPKYSLAPVGEALRA 79 (390)
T ss_dssp CBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCE-EEEECCCSCCSS-CCGGGCSHHHHHHHHH
T ss_pred CChhhcCcCCCEEEEEecCCCcccCCccCChHHHHHHHHHHHHHHHCCCE-EEEECCCCCCCC-CCCCcCHHHHHHHHHH
Confidence 5999999999999999999999964 999999999999998 999999999998 7899999999999999
Q ss_pred hcCCCeeEcCCCCC-hHHHHHhcCCCCCcEEEEecccCcccccccCCCccccccccChHHHHHHHHHHhccCCEEEeccc
Q psy8371 76 LLKKDITFLDDCVG-PKVEEACADPPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAF 154 (528)
Q Consensus 76 ~l~~~V~f~~d~~g-~~~~~~i~~l~~g~illLEN~Rf~~~E~~~~~~~~~~~~~~~~~~~~~~~~~La~l~DiyVnDAF 154 (528)
+|| +|+|++||+| +++++++++|++|||+||||||||+||+++ | +.|+++||+|||+||||||
T Consensus 80 lLg-~V~f~~d~~G~~~~~~~v~~l~~G~VlLLEN~RF~~~E~~n--d-------------~~fa~~LA~l~DvyVNDAF 143 (390)
T 1v6s_A 80 HLP-EARFAPFPPGSEEARREAEALRPGEVLLLENVRFEPGEEKN--D-------------PELSARYARLGEAFVLDAF 143 (390)
T ss_dssp HCT-TEEECCSCTTSHHHHHHHHTCCTTCEEECSCGGGSTTTTTT--C-------------HHHHHHHGGGCSEEEECCG
T ss_pred HhC-CceeccccCCcHHHHHHHhcCCCCeEEEEcccccccccccC--C-------------HHHHHHHHhhCCEEEEcCc
Confidence 999 9999999999 999999999999999999999999999853 2 3799999999999999999
Q ss_pred ccccccCccccccc-ccccchhhhHHHHHHHHHhhhcCCCCcEEEEEcCCccchHHHHHHHHHHhhceEEEchHHHHHHH
Q psy8371 155 GTAHRAHSSMLGEG-FEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFL 233 (528)
Q Consensus 155 ~~aHR~haS~~g~~-~~~~~aG~l~ekEl~~L~~~~~~p~rP~vailGGaKvsdKi~~i~~l~~~vD~iiigG~ma~tFl 233 (528)
|+|||+||||+||+ +.|+|||+||+|||++|++++++|+||++||+|||||||||++|+||+++||+|||||+||||||
T Consensus 144 gtaHRahaS~~gi~~~lp~~aG~Lm~kEl~~l~k~l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~tFl 223 (390)
T 1v6s_A 144 GSAHRAHASVVGVARLLPAYAGFLMEKEVRALSRLLKDPERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFL 223 (390)
T ss_dssp GGTTSCCCCCCCGGGTSCEEECHHHHHHHHHHHTTTSSCCSSEEEEECCSCGGGTHHHHHHHGGGCSEEEECSTTHHHHH
T ss_pred ccccccccchhhHhhhhHHhhhHHHHHHHHHHHHHhcCCCCCeEEEEcCCchhhHHHHHHHHHHHhccceeCcHHHHHHH
Confidence 99999999999998 44799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCccccCCcchHHHHHHHHHHHhCCCeEEeeeeEEEeccccCCCceeeeeccCCCCCCCcccccChhHHHHHH
Q psy8371 234 KELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVPDGWMGLDIGPKSRELFK 313 (528)
Q Consensus 234 ~a~~g~~ig~s~~e~~~~~~a~~~~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti~~~~ 313 (528)
+| ||++||+|++|++.++.|++|+++|+++|++|+||+|++|+++|+.++++.+++. ++||+|||+|||||+|++.|+
T Consensus 224 ~A-~G~~iG~Sl~E~d~~~~a~~ll~~a~~~g~~i~lPvD~vva~~f~~~a~~~~~~~-~~ip~~~m~lDiGp~T~~~~~ 301 (390)
T 1v6s_A 224 KA-LGGEVGRSLVEEDRLDLAKDLLGRAEALGVRVYLPEDVVAAERIEAGVETRVFPA-RAIPVPYMGLDIGPKTREAFA 301 (390)
T ss_dssp HH-TTCBCTTCCCCGGGHHHHHHHHHHHHHHTCEEECCSEEEEESSCCTTCCCEEEET-TBCCTTCEEEEECHHHHHHHH
T ss_pred HH-cCCCCCccccchhhHHHHHHHHHHHHHcCCEEECCcChhhhhccCCCCceEEeeh-hcCCCCCEeeecCHHHHHHHH
Confidence 99 9999999999999999999999999999999999999999999999999888875 579999999999999999999
Q ss_pred HHHccCCeEEEeCCcccccccchhHHHHHHHHHHHhhhcCCceEEEecCchHHHhhhcCCcCCcceeecCCCcchhhhhh
Q psy8371 314 EPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLEG 393 (528)
Q Consensus 314 ~~i~~a~ti~wnGP~GvfE~~~F~~GT~~i~~aia~~~~~~~~sIiGGGdt~aa~~~~g~~~~~s~vSTgGGA~le~L~~ 393 (528)
++|++|+||||||||||||+++|+.||+++++++++++ +++||+|||||++|++++|+.++++|+||||||+|++|+|
T Consensus 302 ~~i~~akTivWNGPmGvFE~~~Fa~GT~~va~aia~~~--~~~sivGGGDt~aav~~~g~~d~~shiSTGGGA~Le~LeG 379 (390)
T 1v6s_A 302 RALEGARTVFWNGPMGVFEVPPFDEGTLAVGQAIAALE--GAFTVVGGGDSVAAVNRLGLKERFGHVSTGGGASLEFLEK 379 (390)
T ss_dssp HHTTTCSEEEEESCSSCTTSTTTTHHHHHHHHHHHTCS--SCEEEEESHHHHHHHHTTTCGGGSSEECCSSSHHHHHHHH
T ss_pred HHHhhCCEEEEeCCcccccCchHHHHHHHHHHHHHhcC--CCEEEECChHHHHHHHHcCCccCceEEeCChHHHHHHHcC
Confidence 99999999999999999999999999999999999842 4699999999999999999999999999999999999999
Q ss_pred hccccCC
Q psy8371 394 KIKEKGF 400 (528)
Q Consensus 394 k~Lp~g~ 400 (528)
|.||+..
T Consensus 380 k~LPgv~ 386 (390)
T 1v6s_A 380 GTLPGLE 386 (390)
T ss_dssp SCCHHHH
T ss_pred CCcchHH
Confidence 9999865
No 8
>3q3v_A Phosphoglycerate kinase; structural genomics, center for structural genomics of infec diseases, csgid, PGK; HET: PGE; 2.15A {Campylobacter jejuni subsp} SCOP: c.86.1.0
Probab=100.00 E-value=1.4e-133 Score=1042.85 Aligned_cols=376 Identities=44% Similarity=0.754 Sum_probs=361.6
Q ss_pred CCcccccccccCCCEEEEEecCCCCCCC-----------CcHHHHHHHHHCCCCeEEEEccCCCCCCCCCCCCChHHHHH
Q psy8371 3 LNKLSVDLLNLAGKRVLMRVDFNVPMKE-----------AALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAE 71 (528)
Q Consensus 3 ~~~~ti~d~~~~gk~VlvRvD~NvP~~~-----------~~lpTI~~l~~~gak~vil~sHlGRP~g~~~~~~Sl~~~a~ 71 (528)
|+++||+|+|++||||||||||||||++ +++|||+||+++||| |||+||||||+|+ ++++||+|||+
T Consensus 5 ~~~~ti~d~dl~gKrVlvRvD~NVP~~~~g~Itdd~RI~aalpTI~~ll~~Gak-Vil~SHlGRP~g~-~~~~SL~pva~ 82 (403)
T 3q3v_A 5 SDIISIKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIPTIRYCLDNGCS-VILASHLGRPKEI-SSKYSLEPVAK 82 (403)
T ss_dssp -CBCBGGGSCCTTCEEEEECCCCCCBCTTCCBSCCHHHHHHHHHHHHHHHTTCE-EEEECCCSCCSSC-CGGGCSHHHHH
T ss_pred ccCCchhhhccCCCEEEEEeccCCCcCCCCcccChHHHHHHHHHHHHHHHCCCE-EEEEecCCCCCCC-CcccCHHHHHH
Confidence 4789999999999999999999999963 999999999999998 9999999999987 78999999999
Q ss_pred HHHHhcCCCeeEcCCCCC-hHHHHHhcCCCCCcEEEEecccCcccccccCCCccccccccChHHHHHHHHHHhccCCEEE
Q psy8371 72 ELKTLLKKDITFLDDCVG-PKVEEACADPPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYV 150 (528)
Q Consensus 72 ~L~~~l~~~V~f~~d~~g-~~~~~~i~~l~~g~illLEN~Rf~~~E~~~~~~~~~~~~~~~~~~~~~~~~~La~l~DiyV 150 (528)
+|+++||++|.|++||+| +++++ +++|++|||+||||||||+||+++ | +.|+++||+|||+||
T Consensus 83 ~L~~lLg~~V~f~~d~~G~~~~~~-v~~l~~G~VlLLEN~RF~~~E~~n--d-------------~~fa~~LA~l~DvyV 146 (403)
T 3q3v_A 83 RLARLLDKEIVMAKDVIGEDAKTK-AMNLKAGEILLLENLRFEKGETKN--D-------------ENLAKELASMVQVYI 146 (403)
T ss_dssp HHHHHHTSCCEECSSSSSHHHHHH-HHHCCTTCEEECSCGGGSTTGGGT--C-------------HHHHHHHHHTCSEEE
T ss_pred HHHHHHCCCeEecCCCCCcHHHHH-HhcCCCCcEEEEeecccccchhhc--H-------------HHHHHHHHhhCCEEE
Confidence 999999999999999999 99999 999999999999999999999863 2 489999999999999
Q ss_pred ecccccccccCccccccc-ccc-c--chhhhHHHHHHHHHhhhcCCCCcEEEEEcCCccchHHHHHHHHHHhhceEEEch
Q psy8371 151 NDAFGTAHRAHSSMLGEG-FEQ-R--ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGG 226 (528)
Q Consensus 151 nDAF~~aHR~haS~~g~~-~~~-~--~aG~l~ekEl~~L~~~~~~p~rP~vailGGaKvsdKi~~i~~l~~~vD~iiigG 226 (528)
|||||||||+|||++||+ +.| + |||+||+|||++|++++++|+||++||+|||||||||++|+||+++||+|||||
T Consensus 147 NDAFgtaHRahaS~~Gi~~~lp~~~~~aG~Lm~kEl~~l~k~l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGG 226 (403)
T 3q3v_A 147 NDAFGVCHRAHSSVEAITKFFDEKHKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVSGKLQALTNLLPKVDKLIIGG 226 (403)
T ss_dssp ECCGGGTTSCCTTTTGGGGGSCTTSEEECHHHHHHHHHHHHHTTCCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECS
T ss_pred ECcchhhhhcCcchhhHHHhCCcchhhccHHHHHHHHHHHHHHcCCCCceEEEEeCccHHHHHHHHHHHHHhcCEEEECc
Confidence 999999999999999998 445 7 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCccccCCcchHHHHHHHHHHHhCCCeEEeeeeEEEeccccCCCceeeeeccCCCCCCCcccccCh
Q psy8371 227 GMSYTFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVPDGWMGLDIGP 306 (528)
Q Consensus 227 ~ma~tFl~a~~g~~ig~s~~e~~~~~~a~~~~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp 306 (528)
+||||||+| ||++||+|++|++.++.|++|+++|+++|++|+||+|++|+++|+.++++.+++. ++||+|||+|||||
T Consensus 227 gma~tFl~A-~G~~iG~Sl~e~d~~~~a~~ll~~a~~~g~~i~LPvD~vva~~f~~~a~~~~~~~-~~ip~~~m~lDIGp 304 (403)
T 3q3v_A 227 GMAFTFLKA-LGYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPACSQDVPMKFVPA-QEIPNGWMGLDIGP 304 (403)
T ss_dssp TTHHHHHHH-TTCCCTTSCCCGGGHHHHHHHHHHHHHTTCEEECCSEEEEESSSSTTSCCEEEEG-GGCCTTCEEEEECH
T ss_pred HHHHHHHHH-cCCCcCccccchhhHHHHHHHHHHHHHcCCEEECCceEEEeeccCCCCceEEEec-ccCCCCCEeeecCh
Confidence 999999999 9999999999999999999999999999999999999999999999999988886 58999999999999
Q ss_pred hHHHHHHHHHccCCeEEEeCCcccccccchhHHHHHHHHHHHhhhcCCceEEEecCchHHHhhhcCCcCCcceeecCCCc
Q psy8371 307 KSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGA 386 (528)
Q Consensus 307 ~Ti~~~~~~i~~a~ti~wnGP~GvfE~~~F~~GT~~i~~aia~~~~~~~~sIiGGGdt~aa~~~~g~~~~~s~vSTgGGA 386 (528)
+|++.|+++|++|+||||||||||||+++|+.||++++++++++ +++||+|||||++|++++|+.++++|+||||||
T Consensus 305 ~T~~~~~~~i~~akTIvWNGP~GvFE~~~Fa~GT~~va~aia~~---~a~sIvGGGDt~aav~~~g~~d~~shiSTGGGA 381 (403)
T 3q3v_A 305 ASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKGSIKMSHYISEG---HATSVVGGGDTADVVARAGDADEMTFISTGGGA 381 (403)
T ss_dssp HHHHHHHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHS---SSEEEEESHHHHHHHHHTTCGGGSSEECCCHHH
T ss_pred HHHHHHHHHHHhCCEEEEECCCccccccchhHHHHHHHHHHHhc---CCEEEECCcHHHHHHHHcCCcCCccEEcCChHH
Confidence 99999999999999999999999999999999999999999974 579999999999999999999999999999999
Q ss_pred chhhhhhhccccCCC
Q psy8371 387 SLELLEGKIKEKGFG 401 (528)
Q Consensus 387 ~le~L~~k~Lp~g~G 401 (528)
+|++|+||.||+...
T Consensus 382 ~Le~LeGk~LPgv~a 396 (403)
T 3q3v_A 382 SLELIEGKELPGVKA 396 (403)
T ss_dssp HHHHHTTCCCHHHHT
T ss_pred HHHHHcCCCCcHHHH
Confidence 999999999999765
No 9
>4fey_A Phosphoglycerate kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: ADP; 2.30A {Francisella tularensis subsp} PDB: 4ehj_A
Probab=100.00 E-value=3.8e-133 Score=1037.30 Aligned_cols=371 Identities=43% Similarity=0.723 Sum_probs=356.9
Q ss_pred CCcccccccccCCCEEEEEecCCCCCCC----------CcHHHHHHHHHCCCCeEEEEccCCCC-CCCCCCCCChHHHHH
Q psy8371 3 LNKLSVDLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHLGRP-DGSKNLKYSLKPVAE 71 (528)
Q Consensus 3 ~~~~ti~d~~~~gk~VlvRvD~NvP~~~----------~~lpTI~~l~~~gak~vil~sHlGRP-~g~~~~~~Sl~~~a~ 71 (528)
|.++||+|+|++|||||||||||||+++ +++|||+||+++||| |||+|||||| +|++++++||+|||+
T Consensus 4 m~~~ti~d~dl~gKrVlvRvD~NVP~~~g~Itdd~RI~a~lpTI~~ll~~gak-Vil~SHlGRP~kg~~~~~~SL~pva~ 82 (395)
T 4fey_A 4 MSFLTLKDVDLKDKKVLVRVDFNVPVKDGKVTSKVRIEAAIPTIQYILDQGGA-VILMSHLGRPTEGEYDSQFSLEPVAK 82 (395)
T ss_dssp CCSCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHTHHHHHHHHHHTCE-EEEECCCSCCCTTSCCGGGCSHHHHH
T ss_pred cccCchhhcCcCCCEEEEEeccCCCCcCCcCCChHHHHHHHHHHHHHHHCCCE-EEEEecCCCCCCCCcCcccCHHHHHH
Confidence 6789999999999999999999999964 999999999999998 9999999999 788889999999999
Q ss_pred HHHHhcCCCeeEcCCCCChHHHHHhcCCCCCcEEEEecccCcccccccCCCccccccccChHHHHHHHHHHhccCCEEEe
Q psy8371 72 ELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVN 151 (528)
Q Consensus 72 ~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~illLEN~Rf~~~E~~~~~~~~~~~~~~~~~~~~~~~~~La~l~DiyVn 151 (528)
+|+++||++|.|++||+|. + +|++|||+||||+|||+||+++ | +.|+++||+|||+|||
T Consensus 83 ~L~~lLg~~V~f~~d~~~~-----v-~l~~G~VlLLEN~RF~~~E~~n--d-------------~~fa~~LA~l~DvyVN 141 (395)
T 4fey_A 83 ALSEIINKPVKFAKDWLDG-----V-DVKAGEIVMCENVRFNSGEKKS--T-------------DDLSKKIASLGDVFVM 141 (395)
T ss_dssp HHHHHHCSCEEEESSTTTC-----C-CCCTTCEEEECCGGGSTTTTTT--C-------------HHHHHHHHHTCSEEEE
T ss_pred HHHHHHCCCcEECcccccc-----c-CCCCCcEEEEeecccCchhhhc--H-------------HHHHHHHHhhCCEEEE
Confidence 9999999999999999984 5 9999999999999999999863 2 4899999999999999
Q ss_pred cccccccccCccccccc-ccc-cchhhhHHHHHHHHHhhhcCCCCcEEEEEcCCccchHHHHHHHHHHhhceEEEchHHH
Q psy8371 152 DAFGTAHRAHSSMLGEG-FEQ-RASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMS 229 (528)
Q Consensus 152 DAF~~aHR~haS~~g~~-~~~-~~aG~l~ekEl~~L~~~~~~p~rP~vailGGaKvsdKi~~i~~l~~~vD~iiigG~ma 229 (528)
||||||||+|||++||+ +.| +|||+||+|||++|++++++|+||++||+|||||||||++|+||+++||+|||||+||
T Consensus 142 DAFgtaHRahaS~~Gi~~~lp~~~aG~Lm~kEl~~l~k~l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma 221 (395)
T 4fey_A 142 DAFATAHRAQASTYGVAKYIPVACAGILLTNEIQALEKALKSPKKPMAAIVGGSKVSTKLSVLNNLLDKVEILIVGGGIA 221 (395)
T ss_dssp CCGGGTTSCCTTTTHHHHHSSEEEECHHHHHHHHHHHHHHTSCCSSEEEEEEESCHHHHHHHHHHHTTTCSEEEEEEHHH
T ss_pred CcchhhhhhcccchhhhccCCcccchHHHHHHHHHHHHHhcCCCCceEEEEeCccHHHHHHHHHHHHHhcCEEEEChHHH
Confidence 99999999999999998 445 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCccccCCcchHHHHHHHHHHHhCCCeEEeeeeEEEeccccCCCceeeeeccCCCCCCCcccccChhHH
Q psy8371 230 YTFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVPDGWMGLDIGPKSR 309 (528)
Q Consensus 230 ~tFl~a~~g~~ig~s~~e~~~~~~a~~~~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~Ti 309 (528)
||||+| ||++||+|++|++.++.|++|+++|+++|++|+||+|++|+++|+.++++.+++. ++||+|||+|||||+|+
T Consensus 222 ~tFl~A-~G~~iG~Sl~E~d~~~~a~~il~~a~~~g~~i~LPvD~vva~~f~~~a~~~~~~~-~~ip~~~m~lDiGp~T~ 299 (395)
T 4fey_A 222 NTFIKA-EGFDVGNSLYEQDLVAEATEILAKAKALGVNIPVPVDVRVAKEFSENAQAIIKKV-SDVVADEMILDIGPESQ 299 (395)
T ss_dssp HHHHHH-TTCCCTTCCCCGGGHHHHHHHHHHHHHTTCBCCCCSEEEEESSSSTTCCCEEEEG-GGCCTTCEEEEECHHHH
T ss_pred HHHHHH-cCCccCccccchhhHHHHHHHHHHHHHcCCEEEccceEEEeccccCCCceEEEEc-ccCCCCCcceecChHHH
Confidence 999999 9999999999999999999999999999999999999999999999999988886 58999999999999999
Q ss_pred HHHHHHHccCCeEEEeCCcccccccchhHHHHHHHHHHHhhhcCCceEEEecCchHHHhhhcCCcCCcceeecCCCcchh
Q psy8371 310 ELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLE 389 (528)
Q Consensus 310 ~~~~~~i~~a~ti~wnGP~GvfE~~~F~~GT~~i~~aia~~~~~~~~sIiGGGdt~aa~~~~g~~~~~s~vSTgGGA~le 389 (528)
+.|+++|++|+||||||||||||+++|+.||+++++++++. +++||+|||||++|++++|+.++++|+||||||+|+
T Consensus 300 ~~~~~~i~~akTIvWNGP~GvFE~~~Fa~GT~~va~aia~~---~a~sivGGGDt~aav~~~g~~d~~shiSTGGGA~Le 376 (395)
T 4fey_A 300 KIIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAQS---HAFSVAGGGDTIAAIEKFGIKDQVSYISTAGGAFLE 376 (395)
T ss_dssp HHHHHHHHHCSEEEEECCSSCTTSGGGCHHHHHHHHHHHHH---CSEEEEESHHHHHHHHHTTCSTTSSEEECCSHHHHH
T ss_pred HHHHHHHHhCCEEEEECCCCccccchhhHHHHHHHHHHHhc---CCeEEECCcHHHHHHHHcCCcCCceEEcCChHHHHH
Confidence 99999999999999999999999999999999999999973 689999999999999999999999999999999999
Q ss_pred hhhhhccccCC
Q psy8371 390 LLEGKIKEKGF 400 (528)
Q Consensus 390 ~L~~k~Lp~g~ 400 (528)
+|+||.||+..
T Consensus 377 ~LeGk~LPgv~ 387 (395)
T 4fey_A 377 FLEGKKLPAIE 387 (395)
T ss_dssp HHTTCCCHHHH
T ss_pred HHcCCCchHHH
Confidence 99999999875
No 10
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=100.00 E-value=3e-131 Score=1020.89 Aligned_cols=365 Identities=41% Similarity=0.688 Sum_probs=348.3
Q ss_pred CCcccccccccCCCEEEEEecCCCCCCC----------CcHHHHHHHHHCCCCeEEEEccCCCC-CCCCCCCCChHHHHH
Q psy8371 3 LNKLSVDLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHLGRP-DGSKNLKYSLKPVAE 71 (528)
Q Consensus 3 ~~~~ti~d~~~~gk~VlvRvD~NvP~~~----------~~lpTI~~l~~~gak~vil~sHlGRP-~g~~~~~~Sl~~~a~ 71 (528)
|+++||+|+|++|||||||||||||+++ +++|||+||+++||| |||+|||||| +|++++++||+|||+
T Consensus 1 m~k~ti~d~dl~gKrVlvRvD~NVP~~~g~Itdd~RI~aalpTI~~ll~~gak-vil~SHlGRP~kG~~~~~~SL~pva~ 79 (387)
T 1zmr_A 1 MSVIKMTDLDLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTIELALKQGAK-VMVTSHLGRPTEGEYNEEFSLLPVVN 79 (387)
T ss_dssp -CCCBGGGSCCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCE-EEEECCCSSCBTTBCCGGGCSHHHHH
T ss_pred CCCCcccccCcCCCEEEEEecCCCcccCCccCChHHHHHHHHHHHHHHHCCCE-EEEEccCCCCCCCCcCCccCHHHHHH
Confidence 3468999999999999999999999964 999999999999998 9999999999 887789999999999
Q ss_pred HHHHhcCCCeeEcCCCC-ChHHHHHhcCCCCCcEEEEecccCcccccccCCCccccccccChHHHHHHHHHHhccCCEEE
Q psy8371 72 ELKTLLKKDITFLDDCV-GPKVEEACADPPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYV 150 (528)
Q Consensus 72 ~L~~~l~~~V~f~~d~~-g~~~~~~i~~l~~g~illLEN~Rf~~~E~~~~~~~~~~~~~~~~~~~~~~~~~La~l~DiyV 150 (528)
+|+++||++|+|++||+ | ++ |++|||+||||||||+||+++ | +.|+++||+|||+||
T Consensus 80 ~L~~lLg~~V~f~~d~~~G------v~-l~~G~VlLLEN~RF~~~E~~n--d-------------~~fa~~LA~l~DvyV 137 (387)
T 1zmr_A 80 YLKDKLSNPVRLVKDYLDG------VD-VAEGELVVLENVRFNKGEKKD--D-------------ETLSKKYAALCDVFV 137 (387)
T ss_dssp HHHHHCSSCEEEESCCTTC------CC-CCTTCEEEECCGGGSTTTTTT--C-------------HHHHHHHHHTCSEEE
T ss_pred HHHHHhCCCCEECcccccC------cc-CCCCeEEEEcccCCCcchhcC--C-------------HHHHHHHHhhCCEEE
Confidence 99999999999999999 8 88 999999999999999999853 2 379999999999999
Q ss_pred ecccccccccCccccccc-ccc-cchhhhHHHHHHHHHhhhcCCCCcEEEEEcCCccchHHHHHHHHHHhhceEEEchHH
Q psy8371 151 NDAFGTAHRAHSSMLGEG-FEQ-RASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGM 228 (528)
Q Consensus 151 nDAF~~aHR~haS~~g~~-~~~-~~aG~l~ekEl~~L~~~~~~p~rP~vailGGaKvsdKi~~i~~l~~~vD~iiigG~m 228 (528)
|||||+|||+|||++||+ +.| +|||+||+|||++|++++++|+||++||+|||||||||++|+||+++||+|||||+|
T Consensus 138 NDAFgtaHRahaS~~gi~~~lp~~~aG~Lm~kEl~~l~k~l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgm 217 (387)
T 1zmr_A 138 MDAFGTAHRAQASTHGIGKFADVACAGPLLAAELDALGKALKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGI 217 (387)
T ss_dssp ECCGGGTTSCCCCCCCHHHHSSEEEECHHHHHHHHHHHHHHSSCSSSEEEEEEESCTTTTHHHHHHHHTTCSEEEEEEHH
T ss_pred eccccccccccCchhhhhhhCchhhccHHHHHHHHHHHHHhcCCCCCeEEEEcCcchhhHHHHHHHHHHhcCEEEeCcHH
Confidence 999999999999999998 334 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCccccCCcchHHHHHHHHHHHhCCCeEEeeeeEEEeccccCCCceeeeeccCCCCCCCcccccChhH
Q psy8371 229 SYTFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGVPDGWMGLDIGPKS 308 (528)
Q Consensus 229 a~tFl~a~~g~~ig~s~~e~~~~~~a~~~~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~i~~~~~~~DIGp~T 308 (528)
|||||+| ||++||+|++|++.++.|++|+++ ++|+||+|++|+++|+.++++.+++. ++||+|||+|||||+|
T Consensus 218 a~tFl~A-~G~~iG~Sl~E~d~~~~a~~ll~~-----~~i~lPvD~vva~~f~~~~~~~~~~~-~~ip~~~m~lDiGp~T 290 (387)
T 1zmr_A 218 ANTFIAA-QGHDVGKSLYEADLVDEAKRLLTT-----CNIPVPSDVRVATEFSETAPATLKSV-NDVKADEQILDIGDAS 290 (387)
T ss_dssp HHHHHHH-TTCCCTTCSCCGGGHHHHHHHHTT-----SCCCCCSEEEEESSSSSSCCCEEEEG-GGCCTTCEEEEECHHH
T ss_pred HHHHHHH-cCCCCCccccchhhHHHHHHHHHh-----CCccCCccceeeeccCCCCceEEeeh-hhCCCCCEEeecCHHH
Confidence 9999999 999999999999999999999966 89999999999999999998888876 5799999999999999
Q ss_pred HHHHHHHHccCCeEEEeCCcccccccchhHHHHHHHHHHHhhhcCCceEEEecCchHHHhhhcCCcCCcceeecCCCcch
Q psy8371 309 RELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASL 388 (528)
Q Consensus 309 i~~~~~~i~~a~ti~wnGP~GvfE~~~F~~GT~~i~~aia~~~~~~~~sIiGGGdt~aa~~~~g~~~~~s~vSTgGGA~l 388 (528)
++.|+++|++|+||||||||||||+++|+.||++++++++++ +++||+|||||++|++++|+.++++|+||||||+|
T Consensus 291 ~~~~~~~i~~akTivWNGPmGvFE~~~Fa~GT~~va~aia~~---~~~sivGGGDt~aav~~~g~~d~~shiSTGGGA~L 367 (387)
T 1zmr_A 291 AQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADS---EAFSIAGGGDTLAAIDLFGIADKISYISTGGGAFL 367 (387)
T ss_dssp HHHHHHHHHHCSEEEEESCSBCTTSGGGCHHHHHHHHHHHHS---SSEEEECSHHHHHHHHHHTCGGGSSEECCCTHHHH
T ss_pred HHHHHHHHhhCCEEEEECCcccccCchHHHHHHHHHHHHHhc---CCeEEECCHHHHHHHHHcCCccCceEEeCChHHHH
Confidence 999999999999999999999999999999999999999984 46999999999999999999999999999999999
Q ss_pred hhhhhhccccCC
Q psy8371 389 ELLEGKIKEKGF 400 (528)
Q Consensus 389 e~L~~k~Lp~g~ 400 (528)
++|+||.||+..
T Consensus 368 e~LeGk~LPgv~ 379 (387)
T 1zmr_A 368 EFVEGKVLPAVA 379 (387)
T ss_dssp HHHTTCCCHHHH
T ss_pred HHHcCCCCchHH
Confidence 999999999865
No 11
>2cun_A Phosphoglycerate kinase; structural genomics, tanpaku 3000, structural genomics/proteomics initiative, RSGI, NPPSFA; HET: 3PG; 2.10A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.5e-129 Score=1014.21 Aligned_cols=372 Identities=32% Similarity=0.544 Sum_probs=349.6
Q ss_pred cccccccccCCCEEEEEecCCCCCCC----------CcHHHHHHHHHCCCCeEEEEccCCCCCCCCCCCCChHHHHHHHH
Q psy8371 5 KLSVDLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEELK 74 (528)
Q Consensus 5 ~~ti~d~~~~gk~VlvRvD~NvP~~~----------~~lpTI~~l~~~gak~vil~sHlGRP~g~~~~~~Sl~~~a~~L~ 74 (528)
++||+|+|++||||||||||||||++ +++|||+||+++||| |||+|||||| |+ ++++||+|||++|+
T Consensus 1 ~~ti~d~dl~gKrVlvRvD~NVPl~~g~Itdd~RI~a~lpTI~~ll~~gak-Vvl~SHlGRP-G~-~~~~SL~pva~~L~ 77 (410)
T 2cun_A 1 MFRLEDFNFHNKTVFLRVDLNSPMKDGKIISDARFKAVLPTIRYLIESGAK-VVIGTHQGKP-YS-EDYTTTEEHARVLS 77 (410)
T ss_dssp CCBGGGSCCTTCEEEEECCCCCCEETTEECCCHHHHHTHHHHHHHHHTTCE-EEEECCCSCT-TC-TTCCCSHHHHHHHH
T ss_pred CCchhhcCCCCCEEEEEecCCCcccCCcCCCHHHHHHHHHHHHHHHHCCCE-EEEEcCCCCC-CC-CCCcCHHHHHHHHH
Confidence 46999999999999999999999964 999999999999998 9999999999 65 79999999999999
Q ss_pred HhcCCCeeEcCCCCChHHHHHhcCCCCCcEEEEecccCcccccccCCCccccccccChHHHHHHHHHHhccCCEEEeccc
Q psy8371 75 TLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAF 154 (528)
Q Consensus 75 ~~l~~~V~f~~d~~g~~~~~~i~~l~~g~illLEN~Rf~~~E~~~~~~~~~~~~~~~~~~~~~~~~~La~l~DiyVnDAF 154 (528)
++||++|+|++||+|++++++|++|++|||+||||||||+||+++ +++ +.++.+.|+++||+|||+||||||
T Consensus 78 ~lLg~~V~f~~d~~G~~a~~~i~~l~~G~VlLLEN~RF~~eE~~n--d~~------e~~a~~~fa~~LA~l~DvyVNDAF 149 (410)
T 2cun_A 78 ELLDQHVEYIEDIFGRYAREKIKELKSGEVAILENLRFSAEEVKN--KPI------EECEKTFLVKKLSKVIDYVVNDAF 149 (410)
T ss_dssp HHHTSCEEECSCSSSHHHHHHHHTCCTTCEEECSCGGGBTTTTSC--CCH------HHHTTSHHHHHHHTTCSEEEECCG
T ss_pred HHHCCCCeeCCCcCCHHHHHHHhcCCCCeEEEEcccccccccccC--Cch------hhhhHHHHHHHHHhhCCEEEeccc
Confidence 999999999999999999999999999999999999999999864 320 011235899999999999999999
Q ss_pred ccccccCccccccc-ccccchhhhHHHHHHHHHhhhcCCCCcEEEEEcCCccchHHHHHHHHHHh--hceEEEchHHHHH
Q psy8371 155 GTAHRAHSSMLGEG-FEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDK--VNEMIIGGGMSYT 231 (528)
Q Consensus 155 ~~aHR~haS~~g~~-~~~~~aG~l~ekEl~~L~~~~~~p~rP~vailGGaKvsdKi~~i~~l~~~--vD~iiigG~ma~t 231 (528)
|+|||+|||++||+ +.|+|||+||+|||++|++++++|+||++||+|||||||||++|+||+++ ||+|||||+||||
T Consensus 150 gtaHRahaS~~Gi~~~lps~aG~LmekEl~~l~k~l~~p~rP~vaIlGGaKVsdKi~vi~nLl~k~~vD~liiGGgma~t 229 (410)
T 2cun_A 150 ATAHRSQPSLVGFARIKPMIMGFLMEKEIEALMRAYYSKDSPKIYVLGGAKVEDSLKVVENVLRRERADLVLTGGLVANV 229 (410)
T ss_dssp GGTTCCCHHHHTTTTTSCEEECHHHHHHHHHHHHHHTCCCSCEEEEECSSCHHHHHHHHHHHHHTTSCSEEEECHHHHHH
T ss_pred ccccccCCceechhhhhhhhhhHHHHHHHHHHHHHhcCCCCCeEEEEcCcchhhHHHHHHHHhcccCCCEEEEChHHHHH
Confidence 99999999999998 44789999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHcCCCCCcc---ccCC----cchHHHHHHHHHHHhCCCeEEeeeeEEEeccccCCCceeeeeccCC-----CCCCC
Q psy8371 232 FLKELKGMNIGGS---LYDP----EGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESG-----VPDGW 299 (528)
Q Consensus 232 Fl~a~~g~~ig~s---~~e~----~~~~~a~~~~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~~-----i~~~~ 299 (528)
||+| ||++||+| ++|+ +.++.|++|+++| |++|+||+|++|+++ +++.+++. ++ || ||
T Consensus 230 Fl~A-~G~~iG~S~~~l~E~~g~~d~~~~a~~ll~ka---g~~i~lPvD~vva~~----a~~~~~~~-~~~~~~~ip-~~ 299 (410)
T 2cun_A 230 FTLA-KGFDLGRKNVEFMKKKGLLDYVKHAEEILDEF---YPYIRTPVDFAVDYK----GERVEIDL-LSENRGLLH-QY 299 (410)
T ss_dssp HHHH-HTCCCCHHHHHHHHTTTGGGGHHHHHHHHHHH---GGGEECCSEEEEEET----TEEEEEES-SSGGGGGGG-TS
T ss_pred HHHH-cCCCcCcchhhhhhcccchhhHHHHHHHHHhc---cCeEeCCceeEEecC----CCeEEEec-ccccccCCC-CC
Confidence 9999 99999999 9999 9999999999988 889999999999975 55666775 45 99 99
Q ss_pred cccccChhHHHHHHHHHccCCeEEEeCCcccccccchhHHHHHHHHHHHhhhcCCceEEEecCchHHHhhhcCCcCCcce
Q psy8371 300 MGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVSH 379 (528)
Q Consensus 300 ~~~DIGp~Ti~~~~~~i~~a~ti~wnGP~GvfE~~~F~~GT~~i~~aia~~~~~~~~sIiGGGdt~aa~~~~g~~~~~s~ 379 (528)
|+|||||+|++.|+++|++|+||||||||||||+++|+.||++++++++++ +++||+|||||++|++++|+ ++++|
T Consensus 300 m~lDiGp~T~~~~~~~i~~akTIvWNGPmGvFE~~~Fa~GT~~va~aia~~---~~~sivGGGDt~aav~~~g~-d~~sh 375 (410)
T 2cun_A 300 QIMDIGKRTAEKYREILMKARIIVANGPMGVFEREEFAIGTVEVFKAIADS---PAFSVLGGGHSIASIQKYGI-TGITH 375 (410)
T ss_dssp CEEEECHHHHHHHHHHHHTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHS---SSEEEEECGGGGGGGGGSCC-CCCSE
T ss_pred eeeeeCHHHHHHHHHHHhhCCEEEEECCcccccCchHHHHHHHHHHHHHhc---CCeEEECChHHHHHHHHhCC-CCcEE
Confidence 999999999999999999999999999999999999999999999999984 46999999999999999999 99999
Q ss_pred eecCCCcchhhhhhhccccCCC
Q psy8371 380 VSTGGGASLELLEGKIKEKGFG 401 (528)
Q Consensus 380 vSTgGGA~le~L~~k~Lp~g~G 401 (528)
+||||||+|++|+||.||+...
T Consensus 376 iSTGGGA~Le~LeGk~LPgv~a 397 (410)
T 2cun_A 376 ISTGGGAMLSFFAGEELPVLRA 397 (410)
T ss_dssp ECSCSHHHHHHHTTCCCHHHHH
T ss_pred EcCChHHHHHHHcCCCCcHHHH
Confidence 9999999999999999999764
No 12
>1fw8_A PGK P72, phosphoglycerate kinase; phosphotransferase, glycoly mutant, permutation, permuted sequence, protein foldin domain protein; 2.30A {Saccharomyces cerevisiae} SCOP: c.86.1.1
Probab=100.00 E-value=5.2e-111 Score=877.86 Aligned_cols=337 Identities=62% Similarity=0.975 Sum_probs=317.0
Q ss_pred CCCChHHHHHHHHHhcCCCeeEcCCCCChHHHHHhcCCCCCcEEEEecccCcccccccCCCccccccccChHHHHHHHHH
Q psy8371 62 LKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRES 141 (528)
Q Consensus 62 ~~~Sl~~~a~~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~illLEN~Rf~~~E~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (528)
+++||+|||++|+++||++|+|++||+|+++++++++|++|||+||||||||+||+++..+ ..++.+++|+++..|+++
T Consensus 2 ~~~SL~pva~~L~~lLg~~V~f~~d~vG~~~~~~v~~l~~G~VlLLEN~RF~~~E~g~~~~-~~~~~knd~e~~~~fa~~ 80 (416)
T 1fw8_A 2 SKYSLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEEEGSRKV-DGQKVKASKEDVQKFRHE 80 (416)
T ss_dssp CTTCSHHHHHHHHHHHTSCEEECSCSSSHHHHHHHHTSCTTEEEECCCGGGSHHHHSEEEE-TTEEEECCHHHHHHHHHH
T ss_pred CcCChHHHHHHHHHHHCCCCEeCCCCCCHHHHHHHHcCCCCeEEEEccccccccccccccc-ccchhccCHHHHHHHHHH
Confidence 6789999999999999999999999999999999999999999999999999999832000 012345677777779999
Q ss_pred HhccCCEEEecccccccccCccccccc-ccccchhhhHHHHHHHHHhhhcCCCCcEEEEEcCCccchHHHHHHHHHHhhc
Q psy8371 142 LRKLGDIYVNDAFGTAHRAHSSMLGEG-FEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVN 220 (528)
Q Consensus 142 La~l~DiyVnDAF~~aHR~haS~~g~~-~~~~~aG~l~ekEl~~L~~~~~~p~rP~vailGGaKvsdKi~~i~~l~~~vD 220 (528)
||+|||+|||||||||||+||||+||+ +.| ||||||+|||++|++++++|+|||+||+|||||||||++|+||+++||
T Consensus 81 LA~l~DvyVNDAFgtAHRahaS~~Gi~~~lp-~aG~LmekEl~~l~kal~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD 159 (416)
T 1fw8_A 81 LSSLADVYINDAFGTAHRAHSSMVGFDLPQR-AAGFLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVD 159 (416)
T ss_dssp HHTTCSEEEECCGGGTTSCCHHHHCCCCSCE-EECHHHHHHHHHHHHHHHSCCSSEEEEEECSCSTTTHHHHHHHHTTCS
T ss_pred HHhhCCEEEeccccccchhcCchhhhhhhhc-cccHHHHHHHHHHHHHHcCCCCCeEEEEcCcchhhHHHHHHHHHHhhC
Confidence 999999999999999999999999998 446 999999999999999999999999999999999999999999999999
Q ss_pred eEEEchHHHHHHHHHHcCCC-CCccccCCcchHHHHHHHHHHHhCCCeEEeeeeEEEeccccCCCceee-eeccCCCCCC
Q psy8371 221 EMIIGGGMSYTFLKELKGMN-IGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGE-ATVESGVPDG 298 (528)
Q Consensus 221 ~iiigG~ma~tFl~a~~g~~-ig~s~~e~~~~~~a~~~~~~a~~~~~~i~lP~D~~v~~~~~~~~~~~~-~~~~~~i~~~ 298 (528)
+|||||+||||||+| ||++ ||+|++|++.++.|++|+++|+++|++|+||+|++|+++|+.++++.+ ++. ++||+|
T Consensus 160 ~liiGGgma~TFl~A-~G~~~IG~SL~E~d~~~~a~~ll~kak~~g~~i~lPvD~vva~~f~~~a~~~~~~~~-~~Ip~~ 237 (416)
T 1fw8_A 160 SIIIGGGMAFTFKKV-LENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDK-EGIPAG 237 (416)
T ss_dssp EEEEEGGGHHHHHHH-HSCCCCCSCCCCHHHHHHHHHHHHHHHHHTCEEECCSEEEEESSSSTTCCEEEEETT-TCCCTT
T ss_pred eeEeChHHHHHHHHH-cCCCccCccccChhhHHHHHHHHHHHHhcCCEEECCceEEEeeccCCCCCeEEecch-hcCCCC
Confidence 999999999999999 9999 999999999999999999999999999999999999999999998877 664 589999
Q ss_pred CcccccChhHHHHHHHHHccCCeEEEeCCcccccccchhHHHHHHHHHHHhhhcCCceEEEecCchHHHhhhcCCcCCcc
Q psy8371 299 WMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGAITIIGGGDTATCAAKWNTEDKVS 378 (528)
Q Consensus 299 ~~~~DIGp~Ti~~~~~~i~~a~ti~wnGP~GvfE~~~F~~GT~~i~~aia~~~~~~~~sIiGGGdt~aa~~~~g~~~~~s 378 (528)
||+|||||+|++.|+++|++|+||||||||||||+++|+.||++++++++++++.+++||+|||||++|++++|+.++++
T Consensus 238 ~m~lDIGp~T~~~~~~~i~~akTIvWNGPmGVFE~~~Fa~GT~~va~aia~~~~~~a~sIvGGGDt~aav~~~G~~d~~s 317 (416)
T 1fw8_A 238 WQGLDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTDKIS 317 (416)
T ss_dssp CEEEEECHHHHHHHHHHHHHCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHTTCEEEECTTHHHHHHHHTTCGGGSS
T ss_pred CEEEecCHHHHHHHHHHHhhCCEEEEECCCccccCchHHHHHHHHHHHHHhhccCCCEEEEcCcHHHHHHHHcCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999976567899999999999999999999999
Q ss_pred eeecCCCcchhhhhhhccccCCCC
Q psy8371 379 HVSTGGGASLELLEGKIKEKGFGE 402 (528)
Q Consensus 379 ~vSTgGGA~le~L~~k~Lp~g~G~ 402 (528)
|+||||||+|++|+||.||+...-
T Consensus 318 hiSTGGGA~LE~LEGk~LPgV~aL 341 (416)
T 1fw8_A 318 HVSTGGGASLELLEGKELPGVAFL 341 (416)
T ss_dssp EECSCSHHHHHHHTTCCCHHHHTS
T ss_pred eeccccceehHhhcCCCChHHHHH
Confidence 999999999999999999998864
No 13
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.87 E-value=2.7e-22 Score=188.41 Aligned_cols=129 Identities=25% Similarity=0.412 Sum_probs=115.9
Q ss_pred ceeecCCCcchhhhhhhccccCCCCC-CcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcC
Q psy8371 378 SHVSTGGGASLELLEGKIKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSM 456 (528)
Q Consensus 378 s~vSTgGGA~le~L~~k~Lp~g~G~~-p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M 456 (528)
....|..| |.|+++..|+|.. |..||.|+|||++++. ||++||+|+.++ .|+.|.+ +++|+||+++|.+|
T Consensus 31 ~~~~~~sG-----l~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~-dG~~fdss~~~g-~p~~f~l--g~vI~G~eeaL~gM 101 (167)
T 1jvw_A 31 DAVKLPSG-----LVFQRIARGSGKRAPAIDDKCEVHYTGRLR-DGTVFDSSRERG-KPTTFRP--NEVIKGWTEALQLM 101 (167)
T ss_dssp TEEECTTS-----CEEEEEECCCCSBCCCTTCCEEEEEEEECT-TSCEEEEHHHHT-SCEEECG--GGSCHHHHHHHTTC
T ss_pred CcEECCCC-----EEEEEEEcCCCCcCCCCCCEEEEEEEEEEC-CCCEEeeccccC-CCEEEEe--CchhHHHHHHHcCC
Confidence 34566655 8999999999998 9999999999999986 999999999876 6999999 58999999999999
Q ss_pred ccccccCCCCEEEEEEcCCCccCCCCCCCCCCCCCcEEEEEEEeeeecCcccccchhhHHHHHHHH
Q psy8371 457 QKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFSIDPQVVRSSADIESLLRLI 522 (528)
Q Consensus 457 ~~G~~~~~Ge~~~~~vP~~layG~~g~~~~IPp~a~LvfeveL~~~~~~~~~~~~~~~~~~~~~~~ 522 (528)
++ |+++++++||++|||..|.++.||||++|+|+|+|+++.+.+ ...+.++++++|+.-
T Consensus 102 k~------Ge~~~~~Ip~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~~~~-~~~~~~e~~~~l~k~ 160 (167)
T 1jvw_A 102 RE------GDRWRLFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKDGG-KGRTAEEVDEILRKA 160 (167)
T ss_dssp CT------TCEEEEEECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEGGGC-CSCBHHHHHHHHHHH
T ss_pred CC------CCEEEEEECchhhCCCCCCCCCcCCCCeEEEEEEEEEEEcCC-CCCCHHHHHHHHHHH
Confidence 99 899999999999999999988899999999999999999654 457888999988753
No 14
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.87 E-value=8.1e-22 Score=177.67 Aligned_cols=119 Identities=30% Similarity=0.465 Sum_probs=107.8
Q ss_pred cCCcCCcceeecCCCcchhhhhhh--ccccCCCCC-CcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchH
Q psy8371 371 WNTEDKVSHVSTGGGASLELLEGK--IKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIP 447 (528)
Q Consensus 371 ~g~~~~~s~vSTgGGA~le~L~~k--~Lp~g~G~~-p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~ 447 (528)
+|--..+++.+|..| +.++ ++..|+|.. |+.||.|++||++++. ||++||+++.++ .|+.|.+|.+++++
T Consensus 9 ~~~~~~~~~~~~~~G-----l~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~-dG~~fdss~~~~-~p~~f~lG~g~vi~ 81 (130)
T 2lgo_A 9 MGTLEAQTQGPGSMS-----AQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFP-DGKQFDSSRSRG-KPFQFTLGAGEVIK 81 (130)
T ss_dssp CCCSCCSSCSSSSSS-----CCCCEEEEECCCSSCCCCTTSEEEEEEEEECT-TSCEEECTTTTT-CCEEEETTSTTSCH
T ss_pred ccccccccceeCCCc-----eEEEEEEEeccCCCccCCCCCEEEEEEEEEEC-CCCEEEccCcCC-CCEEEEeCCCCccH
Confidence 444455677777766 7777 899999998 9999999999999986 999999999876 69999999999999
Q ss_pred HHHHHHhcCccccccCCCCEEEEEEcCCCccCCCCCCCCCCCCCcEEEEEEEeee
Q psy8371 448 AFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502 (528)
Q Consensus 448 g~eeaL~~M~~G~~~~~Ge~~~~~vP~~layG~~g~~~~IPp~a~LvfeveL~~~ 502 (528)
||+++|.+|++ |+++++.+||+++||+.+.++.||||++|+|+|+|++|
T Consensus 82 G~e~aL~gm~~------Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 82 GWDQGVATMTL------GEKALFTIPYQLAYGERGYPPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp HHHHHHHHSCT------TEEEEEEECTTTSTTTTCCSTTSCSSCCEEEEEEEEEC
T ss_pred HHHHHHhCCCC------CCEEEEEECcHHHCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 99999999999 89999999999999999998889999999999999875
No 15
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.87 E-value=1.8e-22 Score=182.74 Aligned_cols=119 Identities=32% Similarity=0.586 Sum_probs=101.7
Q ss_pred cCCcceeecCCCcchhhhhhhccccCCCCCCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHH
Q psy8371 374 EDKVSHVSTGGGASLELLEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAI 453 (528)
Q Consensus 374 ~~~~s~vSTgGGA~le~L~~k~Lp~g~G~~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL 453 (528)
..+...+++.+| |.++++..|+|..+..||.|+|||++++..+|++|++|+.++ .|+.|.+|.+++++||+++|
T Consensus 16 ~~~~~~v~~~~g-----l~~~vl~~G~g~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~-~p~~f~lG~g~~i~G~e~aL 89 (134)
T 3b7x_A 16 SQRMLDISGDRG-----VLKDVIREGAGDLVAPDASVLVKYSGYLEHMDRPFDSNYFRK-TPRLMKLGEDITLWGMELGL 89 (134)
T ss_dssp TTTCEESSSSSS-----EEEEEEECCEEEECCTTCEEEEEEEEECTTCSSCSEEC--------CEEC-CCCCCHHHHHHH
T ss_pred ccccceeeCCCC-----EEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCeEEEecCCCC-CCEEEEcCCcchhHHHHHHH
Confidence 345667777776 889999999999999999999999999864699999999876 69999999999999999999
Q ss_pred hcCccccccCCCCEEEEEEcCCCccCCCCCCCCCCCCCcEEEEEEEeeeec
Q psy8371 454 LSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFSI 504 (528)
Q Consensus 454 ~~M~~G~~~~~Ge~~~~~vP~~layG~~g~~~~IPp~a~LvfeveL~~~~~ 504 (528)
.+|++ |+++++++||++|||..+.++.||||++|+|+|+|+++.+
T Consensus 90 ~gm~~------Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i~d 134 (134)
T 3b7x_A 90 LSMRR------GELARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFLD 134 (134)
T ss_dssp HTCEE------TCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC-
T ss_pred hCCCC------CCEEEEEECHHHCcCCCCCCCCcCcCCeEEEEEEEEEEeC
Confidence 99999 8999999999999999999888999999999999999863
No 16
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.86 E-value=1.1e-21 Score=171.76 Aligned_cols=107 Identities=25% Similarity=0.393 Sum_probs=100.6
Q ss_pred hhhhhhccccCCCCC-CcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCE
Q psy8371 389 ELLEGKIKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEK 467 (528)
Q Consensus 389 e~L~~k~Lp~g~G~~-p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~ 467 (528)
+.+.++++..|+|.. |+.||.|++||++++. ||++|++++.++ .|+.|.+|.+++++||+++|.+|++ |++
T Consensus 6 ~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~-dG~~~d~s~~~~-~p~~f~lG~~~~i~g~e~~l~gm~~------Ge~ 77 (113)
T 1yat_A 6 GNVKIDRISPGDGATFPKTGDLVTIHYTGTLE-NGQKFDSSVDRG-SPFQCNIGVGQVIKGWDVGIPKLSV------GEK 77 (113)
T ss_dssp GGCEEEEEECCCSSCCCCTTCEEEEEEEEEET-TSCEEEESTTTT-CCEEEETTSSSSCHHHHHHGGGCCT------TCE
T ss_pred CCeEEEEEECCCCcccCCCCCEEEEEEEEEEC-CCCEEEecCCCC-CcEEEEeCCCCccHHHHHHHhCCCC------CCE
Confidence 348889999999998 9999999999999986 999999999875 6999999999999999999999999 899
Q ss_pred EEEEEcCCCccCCCCCCCCCCCCCcEEEEEEEeeee
Q psy8371 468 SDFFASYELCFGALGCPPRIPAKADLLFEVHLINFS 503 (528)
Q Consensus 468 ~~~~vP~~layG~~g~~~~IPp~a~LvfeveL~~~~ 503 (528)
+++.+||+++||+.+.++.||||++|+|+|+|++++
T Consensus 78 ~~v~ip~~~ayG~~~~~~~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 78 ARLTIPGPYAYGPRGFPGLIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp EEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred EEEEECHHHCcCCCCCCCCcCCCCeEEEEEEEEEeC
Confidence 999999999999999888899999999999999874
No 17
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.86 E-value=1.1e-21 Score=179.82 Aligned_cols=106 Identities=33% Similarity=0.566 Sum_probs=100.7
Q ss_pred hhhhccccCCCC-CCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEE
Q psy8371 391 LEGKIKEKGFGE-NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSD 469 (528)
Q Consensus 391 L~~k~Lp~g~G~-~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~ 469 (528)
+.++++..|+|. .|..||.|+|||++++. ||++|++|+.++ .|+.|.+|.+++++||+++|.+|++ |++++
T Consensus 37 v~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~-dG~~fdss~~~~-~p~~f~lG~g~~i~G~e~~l~gm~~------Ge~~~ 108 (144)
T 3o5e_A 37 VLKIVKRVGNGEETPMIGDKVYVHYKGKLS-NGKKFDSSHDRN-EPFVFSLGKGQVIKAWDIGVATMKK------GEICH 108 (144)
T ss_dssp EEEEEEECCBSSCCCCTTCEEEEEEEEECT-TSCEEEESGGGT-SCEEEETTSSSSCHHHHHHHTTCCB------TCEEE
T ss_pred EEEEEEECCCCCccCCCCCEEEEEEEEEEC-CCCEEEeecccC-CCeEEEeCCCcccHHHHHHHhCCCC------CCEEE
Confidence 788899999997 69999999999999987 999999999876 7999999999999999999999999 89999
Q ss_pred EEEcCCCccCCCCCCCCCCCCCcEEEEEEEeeeec
Q psy8371 470 FFASYELCFGALGCPPRIPAKADLLFEVHLINFSI 504 (528)
Q Consensus 470 ~~vP~~layG~~g~~~~IPp~a~LvfeveL~~~~~ 504 (528)
+++||++|||..|.++.||||++|+|+|+|++|+.
T Consensus 109 v~ipp~~aYG~~g~~~~Ipp~~~L~f~VeL~~ikg 143 (144)
T 3o5e_A 109 LLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKG 143 (144)
T ss_dssp EEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred EEEChHHCcCCCCCCCCcCCCCeEEEEEEEEEecC
Confidence 99999999999999889999999999999999874
No 18
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.86 E-value=6.9e-22 Score=171.17 Aligned_cols=105 Identities=29% Similarity=0.477 Sum_probs=98.7
Q ss_pred hhhhccccCCCCC-CcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEE
Q psy8371 391 LEGKIKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSD 469 (528)
Q Consensus 391 L~~k~Lp~g~G~~-p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~ 469 (528)
|.++++..|+|.. |+.||.|++||++++. ||++|++|+.++ .|+.|.+|.+++++||+++|.+|++ |++++
T Consensus 2 l~~~~~~~G~g~~~~~~gd~V~v~y~~~~~-dG~~~d~s~~~~-~p~~f~lG~~~~i~g~~~~l~gm~~------Ge~~~ 73 (107)
T 2ppn_A 2 VQVETISPGDGRTFPKRGQTCVVHYTGMLE-DGKKFDSSRDRN-KPFKFMLGKQEVIRGWEEGVAQMSV------GQRAK 73 (107)
T ss_dssp EEEEEEECCCSSCCCCTTCEEEEEEEEEET-TSCEEEEHHHHT-SCEEEETTSCCSCHHHHHHHTTCCT------TCEEE
T ss_pred cEEEEEECcCCCcCCCCCCEEEEEEEEEEC-CCCEEEecCCCC-CCEEEEeCCCChHHHHHHHHhCCCC------CCEEE
Confidence 6778899999988 9999999999999987 999999998765 6999999999999999999999999 89999
Q ss_pred EEEcCCCccCCCCCCCCCCCCCcEEEEEEEeeee
Q psy8371 470 FFASYELCFGALGCPPRIPAKADLLFEVHLINFS 503 (528)
Q Consensus 470 ~~vP~~layG~~g~~~~IPp~a~LvfeveL~~~~ 503 (528)
+.+||+++||+.+.++.||||++|+|+|+|++++
T Consensus 74 ~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 74 LTISPDYAYGATGHPGIIPPHATLVFDVELLKLE 107 (107)
T ss_dssp EEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred EEECHHHccCCCCCCCCcCCCCeEEEEEEEEEeC
Confidence 9999999999999888899999999999999874
No 19
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.86 E-value=8.6e-22 Score=176.67 Aligned_cols=106 Identities=33% Similarity=0.566 Sum_probs=100.4
Q ss_pred hhhhccccCCCC-CCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEE
Q psy8371 391 LEGKIKEKGFGE-NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSD 469 (528)
Q Consensus 391 L~~k~Lp~g~G~-~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~ 469 (528)
+.++++..|+|. .|+.||.|+|||++++. ||++|++|+.++ .|+.|.+|.+++++||+++|.+|++ |++++
T Consensus 21 v~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~-dG~~fdss~~~~-~p~~f~lG~g~~i~G~e~~l~gm~~------Ge~~~ 92 (128)
T 3o5q_A 21 VLKIVKRVGNGEETPMIGDKVYVHYKGKLS-NGKKFDSSHDRN-EPFVFSLGKGQVIKAWDIGVATMKK------GEICH 92 (128)
T ss_dssp EEEEEEECCSSSCCCCTTCEEEEEEEEEET-TSCEEEEHHHHT-SCEEEETTSSSSCHHHHHHHTTCCT------TCEEE
T ss_pred EEEEEEECCCCCccCCCCCEEEEEEEEEEC-CCCEEEecCCCC-CCEEEEECCCCccHHHHHHHhcCCC------CCEEE
Confidence 888899999997 59999999999999997 999999998876 6999999999999999999999999 89999
Q ss_pred EEEcCCCccCCCCCCCCCCCCCcEEEEEEEeeeec
Q psy8371 470 FFASYELCFGALGCPPRIPAKADLLFEVHLINFSI 504 (528)
Q Consensus 470 ~~vP~~layG~~g~~~~IPp~a~LvfeveL~~~~~ 504 (528)
+++||++|||+.|.++.||||++|+|+|+|++++.
T Consensus 93 v~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 93 LLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp EEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred EEEChHHcCCCCCCCCCcCCCCEEEEEEEEEEecC
Confidence 99999999999999889999999999999999874
No 20
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.86 E-value=1.5e-21 Score=176.59 Aligned_cols=112 Identities=29% Similarity=0.413 Sum_probs=103.1
Q ss_pred ceeecCCCcchhhhhhhccccCCCCCCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCc
Q psy8371 378 SHVSTGGGASLELLEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQ 457 (528)
Q Consensus 378 s~vSTgGGA~le~L~~k~Lp~g~G~~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~ 457 (528)
....+..| +.++++..|+|+.|+.||.|++||++++. ||++||+++.++ +|+.|.+|.+++++||+++|.+|+
T Consensus 22 ~~~~~~~g-----l~~~~l~~G~G~~~~~gd~V~v~Y~g~~~-dG~~fdss~~~~-~p~~f~lG~g~vi~G~eeaL~gmk 94 (133)
T 2y78_A 22 TVVTTESG-----LKYEDLTEGSGAEARAGQTVSVHYTGWLT-DGQKFDSSKDRN-DPFAFVLGGGMVIKGWDEGVQGMK 94 (133)
T ss_dssp CCEECTTS-----CEEEEEECCSSCBCCTTSEEEEEEEEEET-TSCEEEETTTTT-CCEEEETTSSSSCHHHHHHSTTCB
T ss_pred CcEECCCC-----EEEEEEEcCCCCCCCCCCEEEEEEEEEEC-CCCEEeccCcCC-CCEEEEeCCCChhHHHHHHHcCCC
Confidence 34455544 88899999999999999999999999986 999999999876 699999999999999999999999
Q ss_pred cccccCCCCEEEEEEcCCCccCCCCCCCCCCCCCcEEEEEEEeee
Q psy8371 458 KGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502 (528)
Q Consensus 458 ~G~~~~~Ge~~~~~vP~~layG~~g~~~~IPp~a~LvfeveL~~~ 502 (528)
+ |+++++++||+++||+.+.++.||||++|+|+|+|+++
T Consensus 95 ~------Ge~~~v~ip~~~aYG~~~~~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 95 V------GGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp T------TCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred C------CCEEEEEECcHHhCCCCCCCCCCCCCCeEEEEEEEEEC
Confidence 9 89999999999999999988889999999999999975
No 21
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.86 E-value=1.7e-21 Score=171.97 Aligned_cols=107 Identities=28% Similarity=0.440 Sum_probs=97.7
Q ss_pred hhhhhccccCCCC-CCcCCeEEEEEEEEEEccCceeeeecCCCC------CcceEEecCCCCchHHHHHHHhcCcccccc
Q psy8371 390 LLEGKIKEKGFGE-NPVLGAHVQVHYMYYAEANELPIDITYLRK------SIPERFQLGSSGLIPAFEYAILSMQKGSLN 462 (528)
Q Consensus 390 ~L~~k~Lp~g~G~-~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~------~~P~~f~lG~~~li~g~eeaL~~M~~G~~~ 462 (528)
.+.+++|..|+|. .|+.||.|++||++++. ||++||+|+... ..|+.|.+|.+++++||+++|.+|++
T Consensus 5 g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~-dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~---- 79 (119)
T 3kz7_A 5 KYTKSILKKGDKTNFPKKGDVVHCWYTGTLP-DGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSK---- 79 (119)
T ss_dssp SEEEEEEECCCSSCCCCTTCEEEEEEEEECT-TSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCT----
T ss_pred ccEEEEEEcCCCCCcCCCCCEEEEEEEEEEC-CCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCC----
Confidence 3788999999996 49999999999999986 999999998631 26999999999999999999999999
Q ss_pred CCCCEEEEEEcCCCccCCCCCCC-CCCCCCcEEEEEEEeeee
Q psy8371 463 LSGEKSDFFASYELCFGALGCPP-RIPAKADLLFEVHLINFS 503 (528)
Q Consensus 463 ~~Ge~~~~~vP~~layG~~g~~~-~IPp~a~LvfeveL~~~~ 503 (528)
|+++++++||++|||+.|.++ .||||++|+|+|+|+++.
T Consensus 80 --Ge~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i~ 119 (119)
T 3kz7_A 80 --GEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDID 119 (119)
T ss_dssp --TCEEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEEC
T ss_pred --CCEEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEeC
Confidence 899999999999999999865 799999999999999873
No 22
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.85 E-value=2.3e-21 Score=172.85 Aligned_cols=109 Identities=24% Similarity=0.362 Sum_probs=99.9
Q ss_pred hhhhhccccCC--CCCCcCCeEEEEEEEEEEccCceeeeecCC--CCCcceEEecCCCCchHHHHHHHhcCccccccCCC
Q psy8371 390 LLEGKIKEKGF--GENPVLGAHVQVHYMYYAEANELPIDITYL--RKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSG 465 (528)
Q Consensus 390 ~L~~k~Lp~g~--G~~p~~Gd~V~v~Y~g~~~~dG~~fdss~~--~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~G 465 (528)
.+.+++|..|+ |+.|+.||.|++||++++..||++||+|+. .+ .|+.|.+|.+++++||+++|.+|++ |
T Consensus 13 gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~-~p~~f~lG~~~~i~G~e~~l~gm~~------G 85 (125)
T 4dip_A 13 EVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNG-QPIWFTLGILEALKGWDQGLKGMCV------G 85 (125)
T ss_dssp CCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTT-CCEEEETTSCSSCHHHHHHSTTCCT------T
T ss_pred CeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCC-cCEEEEeCCCChhHHHHHHHhCCCC------C
Confidence 38888898888 788999999999999999668999999984 33 6999999999999999999999999 8
Q ss_pred CEEEEEEcCCCccCCCCCCCCCCCCCcEEEEEEEeeeecCc
Q psy8371 466 EKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFSIDP 506 (528)
Q Consensus 466 e~~~~~vP~~layG~~g~~~~IPp~a~LvfeveL~~~~~~~ 506 (528)
+++++++||++|||+.|.+ .||||++|+|+|+|+++.+.|
T Consensus 86 e~~~~~ip~~~aYG~~g~~-~Ip~~~~l~f~vel~~i~~~P 125 (125)
T 4dip_A 86 EKRKLIIPPALGYGKEGKG-KIPPESTLIFNIDLLEIRNGP 125 (125)
T ss_dssp CEEEEEECGGGTTTTTCBT-TBCTTCCEEEEEEEEEEECCC
T ss_pred CEEEEEEChHHhcCCCCCC-CCCCCCeEEEEEEEEEEEcCC
Confidence 9999999999999999976 799999999999999998654
No 23
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.84 E-value=4.2e-21 Score=173.89 Aligned_cols=107 Identities=34% Similarity=0.576 Sum_probs=100.6
Q ss_pred hhhhccccCCCC-CCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEE
Q psy8371 391 LEGKIKEKGFGE-NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSD 469 (528)
Q Consensus 391 L~~k~Lp~g~G~-~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~ 469 (528)
+.++++..|+|. .|+.||.|++||++++. ||++|++|+.++ .|+.|.+|.+++++||+++|.+|++ |++++
T Consensus 16 l~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~-dG~~fdss~~~~-~p~~f~lG~~~vi~G~e~~l~gm~~------Ge~~~ 87 (135)
T 1r9h_A 16 VLKLIKKEGQGVVKPTTGTTVKVHYVGTLE-NGTKFDSSRDRG-DQFSFNLGRGNVIKGWDLGVATMTK------GEVAE 87 (135)
T ss_dssp EEEEEEECCBSSCCCCTTCEEEEEEEEEET-TSCEEEEHHHHT-SCEEEETTTTSSCHHHHHHHTTCCB------TCEEE
T ss_pred EEEEEEEccCCCcCCCCCCEEEEEEEEEEC-CCCEEEecCcCC-CCEEEEeCCCCccHHHHHHHhcCCC------CCEEE
Confidence 889999999997 59999999999999986 999999998765 6999999999999999999999999 89999
Q ss_pred EEEcCCCccCCCCCCCCCCCCCcEEEEEEEeeeecC
Q psy8371 470 FFASYELCFGALGCPPRIPAKADLLFEVHLINFSID 505 (528)
Q Consensus 470 ~~vP~~layG~~g~~~~IPp~a~LvfeveL~~~~~~ 505 (528)
+++||++|||+.|.++.||||++|+|+|+|+++...
T Consensus 88 v~ip~~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~~~ 123 (135)
T 1r9h_A 88 FTIRSDYGYGDAGSPPKIPGGATLIFEVELFEWSAE 123 (135)
T ss_dssp EEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-
T ss_pred EEEChHHcCCCCCCCCCcCcCCcEEEEEEEEEeecC
Confidence 999999999999998899999999999999999864
No 24
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.84 E-value=9.1e-21 Score=169.98 Aligned_cols=105 Identities=30% Similarity=0.480 Sum_probs=96.1
Q ss_pred hhccccC---CCCCCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEE
Q psy8371 393 GKIKEKG---FGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSD 469 (528)
Q Consensus 393 ~k~Lp~g---~G~~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~ 469 (528)
++++..| +|..|+.||.|++||++++..||++|++|+.++ .|+.|.+|.+++++||+++|.+|++ |++++
T Consensus 20 ~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~-~p~~f~lG~g~~i~g~e~~l~gm~~------Ge~~~ 92 (129)
T 2vn1_A 20 KTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRN-VPFKFHLEQGEVIKGWDICVSSMRK------NEKCL 92 (129)
T ss_dssp EEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTT-CCEEEETTSSSSCHHHHHHHTTCCT------TCEEE
T ss_pred EEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCC-ccEEEEeCCCCcCHHHHHHHhCCCC------CCEEE
Confidence 3567744 578899999999999999833999999999876 6999999999999999999999999 89999
Q ss_pred EEEcCCCccCCCCCCCCCCCCCcEEEEEEEeeeec
Q psy8371 470 FFASYELCFGALGCPPRIPAKADLLFEVHLINFSI 504 (528)
Q Consensus 470 ~~vP~~layG~~g~~~~IPp~a~LvfeveL~~~~~ 504 (528)
+++||+++||+.+.++.||||++|+|+|+|+++..
T Consensus 93 v~ip~~~aYG~~~~~~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 93 VRIESMYGYGDEGCGESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp EEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred EEEChHHcCCCCCCCCCcCCCCeEEEEEEEEEEec
Confidence 99999999999999888999999999999999985
No 25
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.84 E-value=8.6e-21 Score=184.20 Aligned_cols=112 Identities=29% Similarity=0.419 Sum_probs=104.2
Q ss_pred ceeecCCCcchhhhhhhccccCCCCCCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCc
Q psy8371 378 SHVSTGGGASLELLEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQ 457 (528)
Q Consensus 378 s~vSTgGGA~le~L~~k~Lp~g~G~~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~ 457 (528)
.+++|..| +.++++..|+|..|..||.|++||++++. ||++||+|+.++ .|+.|.+|.+++++||+++|.+|+
T Consensus 98 t~~~~~sG-----l~~~vl~~G~G~~~~~gd~V~v~Y~g~l~-dG~~fdss~~~~-~P~~f~lG~g~vi~G~eeaL~gM~ 170 (209)
T 3uf8_A 98 TVVTTESG-----LKYEDLTEGSGAEARAGQTVSVHYTGWLT-DGQKFDSSKDRN-DPFAFVLGGGMVIKGWDEGVQGMK 170 (209)
T ss_dssp CCEECTTS-----CEEEEEECCCSCBCCTTCEEEEEEEEEET-TSCEEEESGGGT-CCEEEETTSSSSCHHHHHHHTTCB
T ss_pred cccCCCCc-----eEEEEEEcCCCCcCCCCCEEEEEEEEEEC-CCCEEEEccccC-CCEEEEeCCCccchhHHHHHhCCC
Confidence 45556555 88999999999999999999999999996 999999999876 799999999999999999999999
Q ss_pred cccccCCCCEEEEEEcCCCccCCCCCCCCCCCCCcEEEEEEEeee
Q psy8371 458 KGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502 (528)
Q Consensus 458 ~G~~~~~Ge~~~~~vP~~layG~~g~~~~IPp~a~LvfeveL~~~ 502 (528)
+ |+++++++||++|||+.|.++.||||++|+|+|+|+++
T Consensus 171 ~------Ge~~~v~Ipp~~aYG~~g~~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 171 V------GGVRRLTIPPQLGYGARGAAGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp T------TCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred C------CCEEEEEECcHHhCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 9 89999999999999999998889999999999999975
No 26
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.84 E-value=4.2e-21 Score=179.87 Aligned_cols=111 Identities=17% Similarity=0.269 Sum_probs=95.1
Q ss_pred hhhhhccccCCCCCC--cCCeEEEEEEEEEEc-cCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCC
Q psy8371 390 LLEGKIKEKGFGENP--VLGAHVQVHYMYYAE-ANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGE 466 (528)
Q Consensus 390 ~L~~k~Lp~g~G~~p--~~Gd~V~v~Y~g~~~-~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge 466 (528)
.|.+++|..|+|..| ..|++|+|||+|++. .||++||||+.++ +|+.|.+|.+++|+||+++|.+|++ |+
T Consensus 11 Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg-~P~~f~lG~g~vI~Gwd~gl~~M~~------Ge 83 (165)
T 2lkn_A 11 GIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARG-KPMELIIGKKFKLPVWETIVCTMRE------GE 83 (165)
T ss_dssp SCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTTT-CCEEEESSSSCSCSHHHHHHTTCCT------TC
T ss_pred CeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEecccCC-CCEEEEecCCCccHHHHHHHhcCcc------Cc
Confidence 489999999999764 579999999999986 2599999999998 7999999999999999999999999 89
Q ss_pred EEEEEEcCCCccCC--------CCCCCC-----------------------------CCCCCcEEEEEEEeeeecCcc
Q psy8371 467 KSDFFASYELCFGA--------LGCPPR-----------------------------IPAKADLLFEVHLINFSIDPQ 507 (528)
Q Consensus 467 ~~~~~vP~~layG~--------~g~~~~-----------------------------IPp~a~LvfeveL~~~~~~~~ 507 (528)
+++|+|||++|||. ....+. ++++++|+|+|||++|..+.+
T Consensus 84 ~~~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P~e 161 (165)
T 2lkn_A 84 IAQFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPGT 161 (165)
T ss_dssp EEEEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECTTT
T ss_pred eEEEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCCcc
Confidence 99999999999992 111112 334478999999999987654
No 27
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.83 E-value=1.4e-20 Score=178.67 Aligned_cols=110 Identities=25% Similarity=0.483 Sum_probs=102.8
Q ss_pred hhhhccccCCCCCCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCC-CchHHHHHHHhcCccccccCCCCEEE
Q psy8371 391 LEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSS-GLIPAFEYAILSMQKGSLNLSGEKSD 469 (528)
Q Consensus 391 L~~k~Lp~g~G~~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~-~li~g~eeaL~~M~~G~~~~~Ge~~~ 469 (528)
+.+++|..|+|..|..||.|+|||++++..+|++|++|+.++ .|+.|.+|.+ ++++||+++|.+|++ |++++
T Consensus 51 l~~~vl~~G~G~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~-~p~~f~lG~g~~vi~G~eeaL~gMk~------Ge~~~ 123 (180)
T 2f4e_A 51 VSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQ-QPIELVLGKEKKELAGLAIGVASMKS------GERAL 123 (180)
T ss_dssp EEEEEEECCBSCCBCTTCEEEEEEEEEETTTCCEEEETTTTT-CCEEEETTSCCGGGHHHHHHHTTCCB------TCEEE
T ss_pred eEEEEEeCCCCCCCCCCCEEEEEEEEEECCCCcEEeccCccC-CCEEEEeCCCCchhHHHHHHHhCCCC------CCEEE
Confidence 889999999999999999999999999975699999999876 7999999999 999999999999999 89999
Q ss_pred EEEcCCCccCCCCC--CCCCCCCCcEEEEEEEeeeecCcc
Q psy8371 470 FFASYELCFGALGC--PPRIPAKADLLFEVHLINFSIDPQ 507 (528)
Q Consensus 470 ~~vP~~layG~~g~--~~~IPp~a~LvfeveL~~~~~~~~ 507 (528)
|++||+++||..|+ ++.||||++|+|+|+|+++....+
T Consensus 124 v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~~e 163 (180)
T 2f4e_A 124 VHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKE 163 (180)
T ss_dssp EEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCBCC
T ss_pred EEECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecCcc
Confidence 99999999999987 467999999999999999987664
No 28
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.83 E-value=1.2e-20 Score=162.10 Aligned_cols=97 Identities=30% Similarity=0.513 Sum_probs=91.3
Q ss_pred CCCCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEEEEEcCCCccCC
Q psy8371 401 GENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGA 480 (528)
Q Consensus 401 G~~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~~~vP~~layG~ 480 (528)
|+.|+.||.|++||++++. ||++|++|+.++ .|+.|.+|.+++++||+++|.+|++ |+++++++||+++||+
T Consensus 3 g~~~~~gd~V~v~y~~~~~-dG~~~d~s~~~~-~p~~f~lG~~~~i~g~~~~l~gm~~------Ge~~~v~ip~~~ayG~ 74 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKLE-DGTEFDSSLPQN-QPFVFSLGTGQVIKGWDQGLLGMCE------GEKRKLVIPSELGYGE 74 (102)
T ss_dssp CCCCCTTCEEEEEEEEECT-TSCEEEESTTTT-CCEEEETTSSSSCHHHHTTSTTCCT------TCEEEEEECGGGTTTT
T ss_pred CCcCCCCCEEEEEEEEEEC-CCCEEEeCCCCC-CCEEEEeCCCCccHHHHHHHhCCCC------CCEEEEEECHHHCcCC
Confidence 5679999999999999985 999999999876 6999999999999999999999999 8999999999999999
Q ss_pred CCCCCCCCCCCcEEEEEEEeeeecC
Q psy8371 481 LGCPPRIPAKADLLFEVHLINFSID 505 (528)
Q Consensus 481 ~g~~~~IPp~a~LvfeveL~~~~~~ 505 (528)
.+.++.||||++|+|+|+|+++...
T Consensus 75 ~~~~~~Ip~~~~l~f~v~l~~v~~~ 99 (102)
T 2pbc_A 75 RGAPPKIPGGATLVFEVELLKIERR 99 (102)
T ss_dssp TCBTTTBCTTCCEEEEEEEEEEGGG
T ss_pred CCCCCCcCcCCeEEEEEEEEEeccc
Confidence 9988889999999999999999864
No 29
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.83 E-value=1.2e-20 Score=183.83 Aligned_cols=112 Identities=26% Similarity=0.357 Sum_probs=103.3
Q ss_pred eeecCCCcchhhhhhhccccCCCCCCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCcc
Q psy8371 379 HVSTGGGASLELLEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQK 458 (528)
Q Consensus 379 ~vSTgGGA~le~L~~k~Lp~g~G~~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~ 458 (528)
.++|..| |.|+++..|+|+.|..||.|+|||++++. ||++||+|+.++ .|+.|.+ +++||||+++|.+|++
T Consensus 101 v~~~~sG-----l~y~vl~~G~G~~p~~gD~V~V~Y~g~l~-dG~vfdss~~~g-~p~~f~l--g~vI~G~eeaL~gMk~ 171 (213)
T 1fd9_A 101 VVVLPSG-----LQYKVINSGNGVKPGKSDTVTVEYTGRLI-DGTVFDSTEKTG-KPATFQV--SQVIPGWTEALQLMPA 171 (213)
T ss_dssp EEECTTS-----CEEEEEECCCSCCCCTTCEEEEEEEEEET-TSCEEEEHHHHC-SCEEEEG--GGSCHHHHHHHTTCCT
T ss_pred cEECCCc-----cEEEEEecCCCccCCCCCEEEEEEEEEEC-CCCEEeeccccC-CCEEEEc--CchhhHHHHHHcCCCC
Confidence 4556655 89999999999999999999999999997 999999999876 6999999 5899999999999999
Q ss_pred ccccCCCCEEEEEEcCCCccCCCCCCCCCCCCCcEEEEEEEeeeecC
Q psy8371 459 GSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFSID 505 (528)
Q Consensus 459 G~~~~~Ge~~~~~vP~~layG~~g~~~~IPp~a~LvfeveL~~~~~~ 505 (528)
|+++++++||+++||+.|.++.||||++|+|+|+|+++.+.
T Consensus 172 ------Gek~~v~IP~~laYG~~g~~~~Ipp~stLiF~VeLl~v~~~ 212 (213)
T 1fd9_A 172 ------GSTWEIYVPSGLAYGPRSVGGPIGPNETLIFKIHLISVKKS 212 (213)
T ss_dssp ------TCEEEEEECGGGTTTTCCCSSSCCTTCCEEEEEEEEEEECC
T ss_pred ------CCEEEEEECchhccCccCCCCCCCCCCeEEEEEEEEEEEcC
Confidence 89999999999999999988889999999999999999853
No 30
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.83 E-value=1.2e-20 Score=184.18 Aligned_cols=100 Identities=25% Similarity=0.361 Sum_probs=95.7
Q ss_pred hhhhccccCCCCCCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEEE
Q psy8371 391 LEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDF 470 (528)
Q Consensus 391 L~~k~Lp~g~G~~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~~ 470 (528)
|.|+++..|+|+.|..||.|+|||++++. ||++||+| + .|+.|.+| ++||||+++|.+|++ |+++++
T Consensus 119 l~y~vl~~G~G~~p~~gd~V~V~Y~g~l~-dG~vfDss---~-~P~~f~lG--~vI~G~eeaL~gMk~------Gek~~v 185 (219)
T 3oe2_A 119 ILMTELTPGTGPKPDANGRVEVRYVGRLP-DGKIFDQS---T-QPQWFRLD--SVISGWTSALQNMPT------GAKWRL 185 (219)
T ss_dssp CEEEEEECCCSCCCCTTSEEEEEEEEECT-TSCEEEEC---S-SCEEEEGG--GSCHHHHHHHTTCCT------TCEEEE
T ss_pred eEEEEEecCCCccCCCCCEEEEEEEEEEC-CCCEeecc---C-CcEEEEec--chhHHHHHHHhCCCC------CCEEEE
Confidence 99999999999999999999999999987 99999999 3 69999996 899999999999999 899999
Q ss_pred EEcCCCccCCCCCCCCCCCCCcEEEEEEEeeee
Q psy8371 471 FASYELCFGALGCPPRIPAKADLLFEVHLINFS 503 (528)
Q Consensus 471 ~vP~~layG~~g~~~~IPp~a~LvfeveL~~~~ 503 (528)
+|||++|||++|.++.||||++|+|+|||++|.
T Consensus 186 ~IPp~lAYG~~g~~~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 186 VIPSDQAYGAEGAGDLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred EECchhcCCCCCCCCCCCCCCeEEEEEEEEEEe
Confidence 999999999999988899999999999999986
No 31
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.82 E-value=9.5e-21 Score=170.10 Aligned_cols=104 Identities=31% Similarity=0.451 Sum_probs=97.4
Q ss_pred hhhhccccCCCCCCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhc------CccccccCC
Q psy8371 391 LEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILS------MQKGSLNLS 464 (528)
Q Consensus 391 L~~k~Lp~g~G~~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~------M~~G~~~~~ 464 (528)
|.++++..|+|+.|+.||.|+|||++++. ||++|++|+.++ +|+.|.+|.+++++||+++|.+ |++
T Consensus 14 l~~~~l~~G~G~~~~~gd~V~v~Y~g~~~-dG~~fdss~~~~-~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~------ 85 (129)
T 1u79_A 14 LAFCDKVVGYGPEAVKGQLIKAHYVGKLE-NGKVFDSSYNRG-KPLTFRIGVGEVIKGWDQGILGSDGIPPMLT------ 85 (129)
T ss_dssp CEEEEEECCSSCBCCTTCEEEEEEEEECT-TSCEEEEHHHHT-SCEEEETTSSSSCHHHHHHHHCBTTBCCCBT------
T ss_pred eEEEEEEcCCCCCCCCCCEEEEEEEEEEC-CCCEEEecCCCC-CCEEEEeCCCCccHHHHHHhcccccccccCC------
Confidence 88999999999999999999999999986 999999998765 6999999999999999999998 999
Q ss_pred CCEEEEEEcCCCccCCCCCC-----CCCCCCCcEEEEEEEeee
Q psy8371 465 GEKSDFFASYELCFGALGCP-----PRIPAKADLLFEVHLINF 502 (528)
Q Consensus 465 Ge~~~~~vP~~layG~~g~~-----~~IPp~a~LvfeveL~~~ 502 (528)
|+++++++||+++||+.+.+ +.||||++|+|+|+|+++
T Consensus 86 Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 86 GGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp TCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred CCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 89999999999999999863 479999999999999986
No 32
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.82 E-value=5.5e-20 Score=162.43 Aligned_cols=102 Identities=30% Similarity=0.381 Sum_probs=95.4
Q ss_pred hhhhccccCCCC--CCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEE
Q psy8371 391 LEGKIKEKGFGE--NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKS 468 (528)
Q Consensus 391 L~~k~Lp~g~G~--~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~ 468 (528)
+.+++|..|+|. .|+.||.|++||++++. ||++|+++ .|+.|.+|.+++++||+++|.+|++ |+++
T Consensus 15 ~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~-dG~~~ds~-----~p~~f~lG~~~~i~g~e~~l~gm~~------Ge~~ 82 (118)
T 2awg_A 15 LRKKTLVPGPPGSSRPVKGQVVTVHLQTSLE-NGTRVQEE-----PELVFTLGDCDVIQALDLSVPLMDV------GETA 82 (118)
T ss_dssp EEEEEEECCCTTCCCCCTTSEEEEEEEEECT-TSCEEEEE-----EEEEEETTSSCSCHHHHHHGGGSCT------TCEE
T ss_pred EEEEEEEcCCCCCccCCCCCEEEEEEEEEEC-CCCEEECC-----CCEEEEECCCChhHHHHHHHhCCCC------CCEE
Confidence 778899999987 79999999999999986 99999973 5999999999999999999999999 8999
Q ss_pred EEEEcCCCccCCCCCCCCCCCCCcEEEEEEEeeeec
Q psy8371 469 DFFASYELCFGALGCPPRIPAKADLLFEVHLINFSI 504 (528)
Q Consensus 469 ~~~vP~~layG~~g~~~~IPp~a~LvfeveL~~~~~ 504 (528)
++++||++|||..+.++.||||++|+|+|+|+++++
T Consensus 83 ~~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~d 118 (118)
T 2awg_A 83 MVTADSKYCYGPQGRSPYIPPHAALCLEVTLKTAVD 118 (118)
T ss_dssp EEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred EEEEChHHccCCCCCCCccCCCCeEEEEEEEEEecC
Confidence 999999999999998888999999999999999863
No 33
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.81 E-value=8.4e-20 Score=169.87 Aligned_cols=105 Identities=30% Similarity=0.360 Sum_probs=97.4
Q ss_pred hhhhccccCCCC--CCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEE
Q psy8371 391 LEGKIKEKGFGE--NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKS 468 (528)
Q Consensus 391 L~~k~Lp~g~G~--~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~ 468 (528)
+.|++|..|+|. .|+.||.|+|||++++. ||++||++ .|+.|.+|.+++++||+++|.+|++ |+++
T Consensus 45 v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~-dG~~fds~-----~p~~f~lG~g~vi~G~eeaL~gMk~------Ge~~ 112 (157)
T 2jwx_A 45 LRKKTLVPGPPGSSRPVKGQVVTVHLQTSLE-NGTRVQEE-----PELVFTLGDCDVIQALDLSVPLMDV------GETA 112 (157)
T ss_dssp EEEEEEECCSTTSCCCCTTEEEEEEEEEECT-TSCEEEEE-----EEEEEETTTTSSCHHHHHHTTTSCT------TCEE
T ss_pred EEEEEEEccCCCccCCCCCCEEEEEEEEEEC-CCCEeecC-----CCEEEEeCCCChhHHHHHHHcCCCC------CCEE
Confidence 378999999997 89999999999999986 99999983 5999999999999999999999999 8999
Q ss_pred EEEEcCCCccCCCC-CCCCCCCCCcEEEEEEEeeeecCcc
Q psy8371 469 DFFASYELCFGALG-CPPRIPAKADLLFEVHLINFSIDPQ 507 (528)
Q Consensus 469 ~~~vP~~layG~~g-~~~~IPp~a~LvfeveL~~~~~~~~ 507 (528)
++++|++++||..| .++.||||++|+|+|+|+++.+..+
T Consensus 113 ~v~IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~~~~ 152 (157)
T 2jwx_A 113 MVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDLEH 152 (157)
T ss_dssp EEEECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEECSC
T ss_pred EEEECchhcCCcccccCCCcCCCCeEEEEEEEEEEEcccc
Confidence 99999999999999 7778999999999999999987643
No 34
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.80 E-value=1.3e-19 Score=177.71 Aligned_cols=102 Identities=31% Similarity=0.525 Sum_probs=96.8
Q ss_pred hhhhccccCCCCCCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEEE
Q psy8371 391 LEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDF 470 (528)
Q Consensus 391 L~~k~Lp~g~G~~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~~ 470 (528)
|.|++|..|+|+.|..||.|+|||++++. ||++||+|+.++ .|+.|.+ +++||||+++|.+|++ |+++++
T Consensus 123 l~y~vl~~G~G~~p~~gD~V~V~Y~g~l~-dG~vfdss~~~g-~p~~f~l--g~vI~G~eeaL~gMk~------Gek~~v 192 (224)
T 1q6h_A 123 LVYQVVEAGKGEAPKDSDTVVVNYKGTLI-DGKEFDNSYTRG-EPLSFRL--DGVIPGWTEGLKNIKK------GGKIKL 192 (224)
T ss_dssp CEEEEEECCSSCCCCTTCEEEEEEEEEET-TSCEEEEGGGGT-SCEEEEG--GGSCHHHHHHGGGSCT------TCEEEE
T ss_pred eEEEEEecccCccccCCCEEEEEEEEEeC-CCCEEeeccccC-CCEEEEc--CCcchhHHHHHcCCCC------CCEEEE
Confidence 88999999999999999999999999987 999999999876 6999999 5899999999999999 899999
Q ss_pred EEcCCCccCCCCCCCCCCCCCcEEEEEEEeeee
Q psy8371 471 FASYELCFGALGCPPRIPAKADLLFEVHLINFS 503 (528)
Q Consensus 471 ~vP~~layG~~g~~~~IPp~a~LvfeveL~~~~ 503 (528)
++||+++||..+.++ ||||++|+|+|+|++++
T Consensus 193 ~IP~~laYG~~g~~~-IPp~stLiF~VeL~~ik 224 (224)
T 1q6h_A 193 VIPPELAYGKAGVPG-IPPNSTLVFDVELLDVK 224 (224)
T ss_dssp EECGGGTTTTTCBTT-BCTTCCEEEEEEEEEEC
T ss_pred EECchhhcCcCCCCC-CCCCCEEEEEEEEEEeC
Confidence 999999999999876 99999999999999874
No 35
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=1.2e-19 Score=164.26 Aligned_cols=105 Identities=30% Similarity=0.396 Sum_probs=97.8
Q ss_pred hhhhccccCCCC--CCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEE
Q psy8371 391 LEGKIKEKGFGE--NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKS 468 (528)
Q Consensus 391 L~~k~Lp~g~G~--~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~ 468 (528)
+.+++|..|+|. .|+.||.|++||++++. ||++|+++ .|+.|.+|.+++++||+++|.+|++ |+++
T Consensus 19 l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~-dG~~fds~-----~p~~f~lG~g~~i~G~e~~L~gm~~------Ge~~ 86 (135)
T 2d9f_A 19 LRKKTLVPGPPGSSRPVKGQVVTVHLQTSLE-NGTRVQEE-----PELVFTLGDCDVIQALDLSVPLMDV------GETA 86 (135)
T ss_dssp SEEEEEECCCSSCCCCCTTSEEEEEEEEEES-SSCEEEEE-----EEEEEETTSCCSCTTTTTTGGGSCT------TCEE
T ss_pred EEEEEEEcCCCCCccCCCCCEEEEEEEEEEC-CCCEEecC-----CCEEEEeCCCChhHHHHHHHhCCCC------CCEE
Confidence 788899999997 79999999999999986 99999972 6999999999999999999999999 8999
Q ss_pred EEEEcCCCccCCCC-CCCCCCCCCcEEEEEEEeeeecCcc
Q psy8371 469 DFFASYELCFGALG-CPPRIPAKADLLFEVHLINFSIDPQ 507 (528)
Q Consensus 469 ~~~vP~~layG~~g-~~~~IPp~a~LvfeveL~~~~~~~~ 507 (528)
++++||+++||..+ .++.||||++|+|+|+|+++...+.
T Consensus 87 ~v~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~~~ 126 (135)
T 2d9f_A 87 MVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDRPD 126 (135)
T ss_dssp EEEECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESSCS
T ss_pred EEEEChhHccCcCCcCCCccCCCCeEEEEEEEEEeecCCc
Confidence 99999999999999 7778999999999999999997654
No 36
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.77 E-value=1.8e-18 Score=174.72 Aligned_cols=107 Identities=35% Similarity=0.573 Sum_probs=101.6
Q ss_pred hhhhccccCCCCC-CcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEE
Q psy8371 391 LEGKIKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSD 469 (528)
Q Consensus 391 L~~k~Lp~g~G~~-p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~ 469 (528)
|.++++..|+|.. |+.||.|+|||++++. ||++|++|+.++ .|+.|.+|.+++++||+++|.+|++ |++++
T Consensus 53 l~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~-dG~~fdss~~~~-~p~~f~lG~g~vi~G~e~aL~gm~~------Ge~~~ 124 (280)
T 1q1c_A 53 VLKVIKREGTGTEMPMIGDRVFVHYTGWLL-DGTKFDSSLDRK-DKFSFDLGKGEVIKAWDIAIATMKV------GEVCH 124 (280)
T ss_dssp EEEEEEECCSSSCCCCTTCEEEEEEEEEET-TSCEEEESTTSS-SCEEEETTTTSSCHHHHHHHTTCCT------TCEEE
T ss_pred eEEEEEeCCCCCcCCCCCCEEEEEEEEEEC-CCCEEEecccCC-CCEEEEECCcChhHHHHHHHhcCCC------CCEEE
Confidence 8899999999997 9999999999999986 999999999876 6999999999999999999999999 89999
Q ss_pred EEEcCCCccCCCCCCCCCCCCCcEEEEEEEeeeecC
Q psy8371 470 FFASYELCFGALGCPPRIPAKADLLFEVHLINFSID 505 (528)
Q Consensus 470 ~~vP~~layG~~g~~~~IPp~a~LvfeveL~~~~~~ 505 (528)
+++||++|||..|+++.||||++|+|+|+|+++...
T Consensus 125 v~ipp~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~~~ 160 (280)
T 1q1c_A 125 ITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKGE 160 (280)
T ss_dssp EEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEECE
T ss_pred EEECcHHhCCCcCccCCCCCCCcEEEEEEeeeeccc
Confidence 999999999999998899999999999999999853
No 37
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.74 E-value=2.8e-18 Score=182.49 Aligned_cols=107 Identities=32% Similarity=0.569 Sum_probs=84.7
Q ss_pred hhhhccccCCCCC-CcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEE
Q psy8371 391 LEGKIKEKGFGEN-PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSD 469 (528)
Q Consensus 391 L~~k~Lp~g~G~~-p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~ 469 (528)
+.++++..|+|.. |..||.|+|||++++. ||++||+|+.++ .|+.|.+|.+++|+||+++|.+|++ |+++.
T Consensus 33 ~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~-~g~~~dss~~~~-~p~~~~~g~~~~i~g~~~~l~~m~~------Ge~~~ 104 (457)
T 1kt0_A 33 VLKIVKRVGNGEETPMIGDKVYVHYKGKLS-NGKKFDSSHDRN-EPFVFSLGKGQVIKAWDIGVATMKR------GEICH 104 (457)
T ss_dssp CEEEC--------CCCBTCEEEEEEEEEC------CBC-------CEEEETTSTTSCHHHHHHHTTCCT------TCEEE
T ss_pred EEEEEEECCCCCCCCCCCCEEEEEEEEEEC-CCCEEeccCCCC-CCeEEEeCCcchhhHHHHHHhhCCC------CCEEE
Confidence 8889999999998 9999999999999985 999999999876 7999999999999999999999999 89999
Q ss_pred EEEcCCCccCCCCCCCCCCCCCcEEEEEEEeeeecC
Q psy8371 470 FFASYELCFGALGCPPRIPAKADLLFEVHLINFSID 505 (528)
Q Consensus 470 ~~vP~~layG~~g~~~~IPp~a~LvfeveL~~~~~~ 505 (528)
|+|||+++||..|+++.|||+++|+|+|+|++|...
T Consensus 105 ~~i~~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~~~ 140 (457)
T 1kt0_A 105 LLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKGE 140 (457)
T ss_dssp EEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEECE
T ss_pred EEEChHHhccccCCCCCCCCCCcEEEEEeeceeecc
Confidence 999999999999998999999999999999999753
No 38
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.71 E-value=2.8e-17 Score=167.96 Aligned_cols=112 Identities=26% Similarity=0.479 Sum_probs=102.7
Q ss_pred hhhhhhccccCCCCCCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCC-CchHHHHHHHhcCccccccCCCCE
Q psy8371 389 ELLEGKIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSS-GLIPAFEYAILSMQKGSLNLSGEK 467 (528)
Q Consensus 389 e~L~~k~Lp~g~G~~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~-~li~g~eeaL~~M~~G~~~~~Ge~ 467 (528)
+.+.++++..|+|..|..||.|+|||++++..+|++||+|+.++ .|+.|.+|.+ ++|+||+++|.+|++ |++
T Consensus 49 ~~~~~~~~~~g~g~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~-~~~~~~lg~~~~~i~g~e~~l~~m~~------Ge~ 121 (338)
T 2if4_A 49 EKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQ-QPIELVLGKEKKELAGLAIGVASMKS------GER 121 (338)
T ss_dssp TTEEEEEEECCBSCCCCTTCEEEEEEEEEETTTCCCCEEHHHHT-CCEEEETTSCCGGGHHHHHHHHHCCB------TCE
T ss_pred CCeEEEEEeCCCCCCCCCCCEEEEEEEEEEcCCCcEeecccCCC-CCeEEEcCCCCcccHHHHHHHhcCCC------CCe
Confidence 34888999999999999999999999999975599999998876 6999999998 899999999999999 899
Q ss_pred EEEEEcCCCccCCCCC--CCCCCCCCcEEEEEEEeeeecCcc
Q psy8371 468 SDFFASYELCFGALGC--PPRIPAKADLLFEVHLINFSIDPQ 507 (528)
Q Consensus 468 ~~~~vP~~layG~~g~--~~~IPp~a~LvfeveL~~~~~~~~ 507 (528)
+.++|||+++||..|. .+.|||+++++|+|+|+++...++
T Consensus 122 ~~~~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~~~e 163 (338)
T 2if4_A 122 ALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKE 163 (338)
T ss_dssp EEEEECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEECCCC
T ss_pred EEEEECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecCCcc
Confidence 9999999999999997 367999999999999999987554
No 39
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.70 E-value=4.8e-17 Score=169.25 Aligned_cols=107 Identities=22% Similarity=0.307 Sum_probs=97.4
Q ss_pred hhhhhccccCCC-CCCcCCeEEEEEEEEEEccCceeeeecC-CCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCE
Q psy8371 390 LLEGKIKEKGFG-ENPVLGAHVQVHYMYYAEANELPIDITY-LRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEK 467 (528)
Q Consensus 390 ~L~~k~Lp~g~G-~~p~~Gd~V~v~Y~g~~~~dG~~fdss~-~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~ 467 (528)
.+.++++..|+| +.|+.||.|+|||++++. ||++|+++. .++ +|+.|.+|.+++|+||+++|.+|++ |++
T Consensus 245 ~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~-dG~~fd~~~~~~~-~p~~f~~G~g~~i~G~e~~l~gm~~------Ge~ 316 (356)
T 3jxv_A 245 KILKKVLKEXEGYERPNEGAVVTVKITGKLQ-DGTVFLKKGHDEQ-EPFEFKTDEEAVIEGLDRAVLNMKK------GEV 316 (356)
T ss_dssp CEEEEEEECCBSSCCCCTTCEEEEEEEEEES-SSCEEEEESCTTS-CCCEEETTTTSSCHHHHHHHTTCCB------TCE
T ss_pred ceeEEeeecccccCCCCCCCEEEEEEEEEEC-CCCEEeeccccCC-cCEEEEECCCccchHHHHHHhCCCC------CCE
Confidence 377888999999 679999999999999997 999999985 444 7999999999999999999999999 899
Q ss_pred EEEEEcCCCccCCCCC--CCCCCCCCcEEEEEEEeeeec
Q psy8371 468 SDFFASYELCFGALGC--PPRIPAKADLLFEVHLINFSI 504 (528)
Q Consensus 468 ~~~~vP~~layG~~g~--~~~IPp~a~LvfeveL~~~~~ 504 (528)
+++++||++|||+.+. .+.||||++|+|+|+|++|.+
T Consensus 317 ~~v~ip~~~aYG~~~~~~~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 317 ALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp EEEEECGGGTTTTSCEESSSEECTTCCEEEEEEEEEEEC
T ss_pred EEEEEChHHccCCCCcCCCCcCCcCCeEEEEEEEEEEEc
Confidence 9999999999999874 356999999999999999975
No 40
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.70 E-value=9.3e-19 Score=182.16 Aligned_cols=108 Identities=33% Similarity=0.552 Sum_probs=2.1
Q ss_pred hhhhccccCCC-CCCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEE
Q psy8371 391 LEGKIKEKGFG-ENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSD 469 (528)
Q Consensus 391 L~~k~Lp~g~G-~~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~ 469 (528)
|.++++..|+| ..|+.||.|++||++++. ||++||+|+.++ .|+.|.+|.+++|+||+++|.+|++ |++++
T Consensus 13 l~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~-dG~~fdss~~~~-~p~~~~lG~g~~i~g~e~~l~gm~~------Ge~~~ 84 (356)
T 3jxv_A 13 LKKKLLKEGEGWDTPEVGDEVEVHYTGTLL-DGKKFDSSRDRD-DTFKFKLGQGQVIKGWDQGIKTMKK------GENAL 84 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEEEEeecCCccCCCCCEEEEEEEEEEC-CCCEEEEcccCC-CcEEEEeCCCccchHHHHHHhcCCC------CCEEE
Confidence 88999999999 569999999999999987 999999999886 6999999999999999999999999 89999
Q ss_pred EEEcCCCccCCCCCCCCCCCCCcEEEEEEEeeeecCc
Q psy8371 470 FFASYELCFGALGCPPRIPAKADLLFEVHLINFSIDP 506 (528)
Q Consensus 470 ~~vP~~layG~~g~~~~IPp~a~LvfeveL~~~~~~~ 506 (528)
+++||++|||+.|.++.||||++|+|+|+|+++....
T Consensus 85 ~~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~~~~~~ 121 (356)
T 3jxv_A 85 FTIPPELAYGESGSPPTIPANATLQFDVELLSWTSVR 121 (356)
T ss_dssp ---------------------------------CCEE
T ss_pred EEEChHHhCCCCCCCCCcCCCCEEEEEeeEEeeeccc
Confidence 9999999999999998999999999999999997543
No 41
>1fw8_A PGK P72, phosphoglycerate kinase; phosphotransferase, glycoly mutant, permutation, permuted sequence, protein foldin domain protein; 2.30A {Saccharomyces cerevisiae} SCOP: c.86.1.1
Probab=99.68 E-value=1.9e-17 Score=173.42 Aligned_cols=56 Identities=61% Similarity=0.930 Sum_probs=52.2
Q ss_pred CcccccccccCCCEEEEEecCCCCCCC----------CcHHHHHHHHHCCCCeEEEEccCCCCCCC
Q psy8371 4 NKLSVDLLNLAGKRVLMRVDFNVPMKE----------AALDTIKYALDKGAKSVVLMSHLGRPDGS 59 (528)
Q Consensus 4 ~~~ti~d~~~~gk~VlvRvD~NvP~~~----------~~lpTI~~l~~~gak~vil~sHlGRP~g~ 59 (528)
.++||+|+|++|||||+||||||||++ +++|||+||+++|||+|||+||||||+|+
T Consensus 349 ~k~TIdD~d~~gk~vl~RvD~NvP~~~g~i~d~~Ri~~~~pti~~l~~~gak~vvl~sH~grp~g~ 414 (416)
T 1fw8_A 349 SKLSVQDLDLKDKRVFIRVDFNVPLDGKKITSNQRIVAALPTIKYVLEHHPRYVVLASHLGRPNGE 414 (416)
T ss_dssp CSCBGGGSCCTTCEEEEECCCCCCBSSSSBSCTHHHHHHHHHHHHHHHTCCSEEEEECCCSCCCSS
T ss_pred ccccccccccccccceeccccccCccCCcccchHHHHHHhHHHHHHHHCCCceEEEeccCCCCCCC
Confidence 368999999999999999999999974 99999999999999878899999999875
No 42
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.61 E-value=1.7e-15 Score=152.98 Aligned_cols=105 Identities=31% Similarity=0.455 Sum_probs=94.3
Q ss_pred hhhhccccCCCC-CCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCC---chHHHHHHHhcCccccccCCCC
Q psy8371 391 LEGKIKEKGFGE-NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSG---LIPAFEYAILSMQKGSLNLSGE 466 (528)
Q Consensus 391 L~~k~Lp~g~G~-~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~---li~g~eeaL~~M~~G~~~~~Ge 466 (528)
+.++++..|+|. .|+.||.|++||++++ ||++|++ .|+.|.+|.++ +++||+++|.+|++ |+
T Consensus 170 l~~~il~~G~G~~~~~~gd~V~i~y~g~~--dG~~fd~------~~~~f~lG~g~~~~~i~G~e~~l~gmk~------Ge 235 (280)
T 1q1c_A 170 IIRRIQTRGEGYAKPNEGAIVEVALEGYY--KDKLFDQ------RELRFEIGEGENLDLPYGLERAIQRMEK------GE 235 (280)
T ss_dssp EEEEEEECCSCSCCCCTTCEEEEEEEEEE--TTEEEEE------EEEEEETTCGGGGTCCHHHHHHHTTCCT------TC
T ss_pred eeEEeeecccccccccCCceEEEEEEEEe--CCEEEec------CCeEEEecCCcccccchhHHHHHhCCCC------Cc
Confidence 777888899998 5999999999999997 8999997 38999999987 59999999999999 89
Q ss_pred EEEEEEcCCCccCCCCCCC-CCCCCCcEEEEEEEeeeecCcccc
Q psy8371 467 KSDFFASYELCFGALGCPP-RIPAKADLLFEVHLINFSIDPQVV 509 (528)
Q Consensus 467 ~~~~~vP~~layG~~g~~~-~IPp~a~LvfeveL~~~~~~~~~~ 509 (528)
++++++||+++||..+.++ .||||++++|+|+|++|+...+.|
T Consensus 236 ~~~v~ip~~~~yG~~~~~~~~IP~~~~l~f~V~L~~i~~~~~~W 279 (280)
T 1q1c_A 236 HSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESW 279 (280)
T ss_dssp EEEEEECGGGTTTTTCBGGGTBCTTCCEEEEEEEEEEECCCC--
T ss_pred EEEEEEChhHcCCcCCCccCccCCCCeEEEEEEEEEEeCCCCCC
Confidence 9999999999999998765 499999999999999999877655
No 43
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.55 E-value=5.9e-15 Score=129.86 Aligned_cols=89 Identities=13% Similarity=0.185 Sum_probs=75.1
Q ss_pred CCCCCCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEEEEEcCCCcc
Q psy8371 399 GFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCF 478 (528)
Q Consensus 399 g~G~~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~~~vP~~lay 478 (528)
.++++++.||.|++||++++ ||++||+|+ + .|+.|.+|.+++||||+++|.+|++ |+++.+.+|+...|
T Consensus 25 v~~~~~~~gD~V~v~Y~g~~--dG~~fdss~--~-~p~~f~lG~g~vi~G~ee~L~Gmk~------Ge~~~v~i~fP~~Y 93 (113)
T 1hxv_A 25 VSDKKLANGDIAIIDFTGIV--DNKKLASAS--A-QNYELTIGSNSFIKGFETGLIAMKV------NQKKTLALTFPSDY 93 (113)
T ss_dssp ----CCCSSEEEEEEEEEEE--TTEECSTTC--C-SEEEEEETSSCSCTTHHHHHHTSCS------SEEEEECCCCCTTS
T ss_pred cCCCCCCCCCEEEEEEEEEE--CCEEcccCC--c-cCEEEEECCCChhHHHHHHHCCCCC------CCEEEEEEeCchhh
Confidence 45678999999999999997 899999996 3 5999999999999999999999999 89999999622339
Q ss_pred CCCCCCCCCCCCCcEEEEEEEeeee
Q psy8371 479 GALGCPPRIPAKADLLFEVHLINFS 503 (528)
Q Consensus 479 G~~g~~~~IPp~a~LvfeveL~~~~ 503 (528)
|..+ .++++++|+|+|++++
T Consensus 94 g~~~-----~~g~~l~F~V~l~~Vk 113 (113)
T 1hxv_A 94 HVKE-----LQSKPVTFEVVLKAIK 113 (113)
T ss_dssp SSSG-----GGSCCCEEEEEECCBC
T ss_pred CcCC-----CCCCEEEEEEEEEEEC
Confidence 9875 3579999999999874
No 44
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.47 E-value=2.1e-13 Score=134.07 Aligned_cols=106 Identities=20% Similarity=0.290 Sum_probs=87.6
Q ss_pred CcCCeEEEEEEEEEEccCceeeeecCCC------------CCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEEEE
Q psy8371 404 PVLGAHVQVHYMYYAEANELPIDITYLR------------KSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFF 471 (528)
Q Consensus 404 p~~Gd~V~v~Y~g~~~~dG~~fdss~~~------------~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~~~ 471 (528)
++.||.|++||++++ ||++||+|+.+ .+.|+.|.+|.++++|||+++|.+|++ |+++++.
T Consensus 2 i~~Gd~V~v~Y~g~l--dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~v------Gek~~v~ 73 (231)
T 3prb_A 2 VEKGKMVKISYDGYV--DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDV------GEEREVV 73 (231)
T ss_dssp CCTTCEEEEEEEEEE--TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCT------TCEEEEE
T ss_pred CCCCCEEEEEEEEEE--CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCC------CCEEEEE
Confidence 578999999999998 99999999863 125999999999999999999999999 8999999
Q ss_pred EcCCCccCCCCCC-----------C-CCC--------------------------------CCCcEEEEEEEeeeecCcc
Q psy8371 472 ASYELCFGALGCP-----------P-RIP--------------------------------AKADLLFEVHLINFSIDPQ 507 (528)
Q Consensus 472 vP~~layG~~g~~-----------~-~IP--------------------------------p~a~LvfeveL~~~~~~~~ 507 (528)
+||++|||.++.. . .++ ++.+|.|+++|+++.+...
T Consensus 74 Ippe~AYGe~~~~lv~~vp~~~f~~~~~~~~vG~~~~~~~~~g~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~v~eat~ 153 (231)
T 3prb_A 74 LPPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIEEVVDDKK 153 (231)
T ss_dssp ECGGGTTCCCCGGGEEEEETHHHHTTTCCCCTTCEEEETTEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEECCSHH
T ss_pred eCcHHhcCCCChHHEEecCHHHCCcccCCCCCCcEEEecCCCEEEEEEcCCEEEEeCCCccCCCEEEEEEEEEEEecCCH
Confidence 9999999987521 1 111 4679999999999986543
Q ss_pred cccchhhHHHHHHHH
Q psy8371 508 VVRSSADIESLLRLI 522 (528)
Q Consensus 508 ~~~~~~~~~~~~~~~ 522 (528)
.+++++++..
T Consensus 154 -----eei~~~~~~~ 163 (231)
T 3prb_A 154 -----NIVKEIVKMY 163 (231)
T ss_dssp -----HHHHHHHHHH
T ss_pred -----HHHHHHHHHh
Confidence 4566666553
No 45
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.45 E-value=6e-13 Score=125.27 Aligned_cols=70 Identities=20% Similarity=0.277 Sum_probs=65.8
Q ss_pred CcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEEEEEcCCCccCCCC
Q psy8371 404 PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALG 482 (528)
Q Consensus 404 p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~~~vP~~layG~~g 482 (528)
++.||.|++||++++. ||++|++|+.+ .|+.|.+|.++++|||+++|.+|++ |+++++.+||++|||.++
T Consensus 3 i~~gd~V~v~Y~g~~~-dG~~fdss~~~--~P~~f~lG~g~vipG~eeaL~Gm~~------Ge~~~v~ippe~aYG~~~ 72 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTE-DGVLVDESPVS--APLDYLHGHGSLISGLETALEGHEV------GDKFDVAVGANDAYGQYD 72 (171)
T ss_dssp CCTTEEEEEEEEEEET-TSCEEEECCSS--SCEEEETTSCSSCSHHHHHHTTCCT------TCEEEEEEETTTSSCCCC
T ss_pred CCCCCEEEEEEEEEEC-CCCEEeeccCC--cCEEEEECCCCcchHHHHHHcCCCC------CCEEEEEECcHHhcCCCC
Confidence 6789999999999986 99999999886 4999999999999999999999999 899999999999999874
No 46
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.44 E-value=7.3e-13 Score=134.90 Aligned_cols=125 Identities=30% Similarity=0.434 Sum_probs=101.1
Q ss_pred hcCCcCCcceeecCCCcchhhhhhhccccCCCC-CCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCC---c
Q psy8371 370 KWNTEDKVSHVSTGGGASLELLEGKIKEKGFGE-NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSG---L 445 (528)
Q Consensus 370 ~~g~~~~~s~vSTgGGA~le~L~~k~Lp~g~G~-~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~---l 445 (528)
..|+......+++.+| +.++++..|+|. .|..|+.|+|||++++ +|.+||++ |+.|.+|.|. +
T Consensus 11 ~~~~~~~~~~~~~~~~-----~~~~~~~~g~g~~~p~~~~~v~v~y~g~~--~g~~fd~~------~~~f~lG~g~~~~~ 77 (336)
T 1p5q_A 11 SSGLVPRGSHMEEDGG-----IIRRIQTRGEGYAKPNEGAIVEVALEGYY--KDKLFDQR------ELRFEIGEGENLDL 77 (336)
T ss_dssp -----------CCTTS-----EEEEEEECCCCSCCCCTTCEEEEEEEEEE--TTEEEEEE------EEEEETTCGGGGTC
T ss_pred ccCCcccceeecCCCc-----EEEEEEeCCCCCCCCCCCCeEEEEEEEEE--CCEEEecC------CeEEEeCCCCcccc
Confidence 3455555566666666 888899999998 6999999999999997 89999986 8999999886 5
Q ss_pred hHHHHHHHhcCccccccCCCCEEEEEEcCCCccCCCCCCC-CCCCCCcEEEEEEEeeeecCcccccchh
Q psy8371 446 IPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPP-RIPAKADLLFEVHLINFSIDPQVVRSSA 513 (528)
Q Consensus 446 i~g~eeaL~~M~~G~~~~~Ge~~~~~vP~~layG~~g~~~-~IPp~a~LvfeveL~~~~~~~~~~~~~~ 513 (528)
+++|+++|..|++ |+++.+.+||+++||..|.+. .|||++++.|+++|.++....+..+...
T Consensus 78 ~~~~e~al~~~~~------Ge~~~l~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~~~~~a~ 140 (336)
T 1p5q_A 78 PYGLERAIQRMEK------GEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNS 140 (336)
T ss_dssp CHHHHHHHTTCCT------TCEEEEEECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEECCCCGGGCCH
T ss_pred chHHHHHHhcCCC------CCeEEEEECCccccCcCCCCccCCCCCCeEEEEEEEeecccccchhcCCH
Confidence 9999999999999 899999999999999999765 5999999999999999998765554443
No 47
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.41 E-value=2.2e-13 Score=128.03 Aligned_cols=72 Identities=22% Similarity=0.353 Sum_probs=67.8
Q ss_pred CCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEEEEEcCCCccCCCC
Q psy8371 403 NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALG 482 (528)
Q Consensus 403 ~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~~~vP~~layG~~g 482 (528)
.++.||.|++||++++. ||++||+|+.++ .|+.|.+|.+++||||+++|.+|++ |+++++.+||++|||+++
T Consensus 24 ~i~~gd~V~v~Y~g~l~-dG~vfDss~~~~-~P~~f~lG~g~vipG~eeaL~gm~~------Ge~~~v~Ipp~~AYG~~~ 95 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLD-DGTTAESTRNNG-KPALFRLGDASLSEGLEQHLLGLKV------GDKTTFSLEPDAAFGVPS 95 (169)
T ss_dssp SCCTTCEEEEEEEEEET-TSCEEEEHHHHT-SCEEEETTSSSSCHHHHHHHTTCCT------TCEEEEEECGGGTTCCCC
T ss_pred cCCCCCEEEEEEEEEEC-CCCEEEecCCCC-CCEEEEECCCCccHHHHHHHcCCCC------CCEEEEEEChHHhcCCCC
Confidence 58999999999999997 999999999875 6999999999999999999999999 899999999999999864
No 48
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.40 E-value=1e-13 Score=127.97 Aligned_cols=85 Identities=25% Similarity=0.335 Sum_probs=73.3
Q ss_pred CcCCeEEEEEEEEEEccCceeeeecCC------------CCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEEEE
Q psy8371 404 PVLGAHVQVHYMYYAEANELPIDITYL------------RKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFF 471 (528)
Q Consensus 404 p~~Gd~V~v~Y~g~~~~dG~~fdss~~------------~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~~~ 471 (528)
++.||.|++||++++. ||++||+|+. ++..|+.|.+|.++++|||+++|.+|++ |+++++.
T Consensus 2 i~~gd~V~v~Y~g~~~-dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~------Ge~~~v~ 74 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLE-SGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEV------GDEKTVK 74 (151)
T ss_dssp CCTTCEEEECCEECCT-TSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCT------TCCCEEE
T ss_pred CCCCCEEEEEEEEEEC-CCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCC------CCEEEEE
Confidence 6789999999999985 9999999974 3335999999999999999999999999 8999999
Q ss_pred EcCCCccCCCCCCCCCCCCCcEEEEEEEeeee
Q psy8371 472 ASYELCFGALGCPPRIPAKADLLFEVHLINFS 503 (528)
Q Consensus 472 vP~~layG~~g~~~~IPp~a~LvfeveL~~~~ 503 (528)
+||++|||.++ ..+++.+.+..|.
T Consensus 75 ipp~~aYG~~~--------~~~v~~v~~~~f~ 98 (151)
T 1ix5_A 75 IPAEKAYGNRN--------EMLIQKIPRDAFK 98 (151)
T ss_dssp ECTTTSSCSCC--------STTBCCEETHHHH
T ss_pred ECcHHHCCCCC--------ccEEEEEEHHHcC
Confidence 99999999865 3456666666554
No 49
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.39 E-value=1.1e-12 Score=120.93 Aligned_cols=85 Identities=21% Similarity=0.327 Sum_probs=74.6
Q ss_pred CCCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEEEEEcCCCccCCC
Q psy8371 402 ENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGAL 481 (528)
Q Consensus 402 ~~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~~~vP~~layG~~ 481 (528)
++++.||.|++||++++..||++||+|+.+ .|+.|.+|.++++|||+++|.+|++ |+++.+.+||++|||.+
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~~--~p~~f~~G~g~vipg~e~aL~gm~~------Ge~~~v~ipp~~aYG~~ 76 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNISK--EPLEFIIGTNQIIAGLEKAVLKAQI------GEWEEVVIAPEEAYGVY 76 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTTT--CCEEEETTCCCSCHHHHHHHTTCCB------TCEEEEEECGGGTTCSS
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCCC--cCEEEEECCCCccHHHHHHHcCCCC------CCEEEEEEecHHHcCCC
Confidence 458899999999999975589999999875 4999999999999999999999999 89999999999999987
Q ss_pred CCCCCCCCCCcEEEEEEEeee
Q psy8371 482 GCPPRIPAKADLLFEVHLINF 502 (528)
Q Consensus 482 g~~~~IPp~a~LvfeveL~~~ 502 (528)
+ ..+++.+....|
T Consensus 77 ~--------~~~v~~v~~~~f 89 (151)
T 2kr7_A 77 E--------SSYLQEVPRDQF 89 (151)
T ss_dssp C--------SCEEEEEEGGGG
T ss_pred C--------cceEEEEcHHHc
Confidence 4 356666666655
No 50
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.37 E-value=7.1e-13 Score=123.16 Aligned_cols=71 Identities=25% Similarity=0.323 Sum_probs=65.3
Q ss_pred CcCCeEEEEEEEEEEccCceeeeecCCC------------CCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEEEE
Q psy8371 404 PVLGAHVQVHYMYYAEANELPIDITYLR------------KSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFF 471 (528)
Q Consensus 404 p~~Gd~V~v~Y~g~~~~dG~~fdss~~~------------~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~~~ 471 (528)
++.||.|++||++++ ||++||+|+.+ ...|+.|.+|.+++||||+++|.+|++ |+++++.
T Consensus 2 i~~Gd~V~v~Y~g~l--dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~------Ge~~~v~ 73 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV--DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDV------GEEREVV 73 (157)
T ss_dssp CCTTCEEEEEEEEEE--TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCT------TCEEEEE
T ss_pred CCCCCEEEEEEEEEE--CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCC------CCEEEEE
Confidence 578999999999998 99999999863 125999999999999999999999999 8999999
Q ss_pred EcCCCccCCCC
Q psy8371 472 ASYELCFGALG 482 (528)
Q Consensus 472 vP~~layG~~g 482 (528)
+||++|||+++
T Consensus 74 Ipp~~aYG~~~ 84 (157)
T 3pr9_A 74 LPPEKAFGKRD 84 (157)
T ss_dssp ECGGGTTCCCC
T ss_pred ECcHHhcCCCC
Confidence 99999999875
No 51
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.34 E-value=2e-12 Score=124.24 Aligned_cols=70 Identities=20% Similarity=0.277 Sum_probs=65.8
Q ss_pred CcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEEEEEcCCCccCCCC
Q psy8371 404 PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALG 482 (528)
Q Consensus 404 p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~~~vP~~layG~~g 482 (528)
++.||.|+|||++++. ||++|++|+.+ +|+.|.+|.+++||||+++|.+|++ |++++|.+||++|||+++
T Consensus 3 i~~gd~V~v~Y~g~~~-dG~~fdss~~~--~P~~f~lG~g~vipG~eeaL~Gm~v------Ge~~~v~Ippe~aYGe~~ 72 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTE-DGVLVDESPVS--APLDYLHGHGSLISGLETALEGHEV------GDKFDVAVGANDAYGQYD 72 (196)
T ss_dssp CCSSCEEEEEEEEEET-TTEEEEECCTT--SCCEEESSSSSSCHHHHHHHSSSCT------TCEEEEECSTTTTSSCCC
T ss_pred CCCCCEEEEEEEEEEC-CCCEEEecCCC--CCEEEEECCCCcchHHHHHHcCCCC------CCEEEEEeCcHHhcCCCC
Confidence 6789999999999985 99999999886 4999999999999999999999999 899999999999999875
No 52
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.19 E-value=2.7e-11 Score=112.58 Aligned_cols=78 Identities=21% Similarity=0.218 Sum_probs=68.9
Q ss_pred CcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEEEEEcCCCccCCCCC
Q psy8371 404 PVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGC 483 (528)
Q Consensus 404 p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~~~vP~~layG~~g~ 483 (528)
++.||.|++||+++ . ||++||+|+ +.|.+|.++++|||+++|.+|++ |+++++.+||++|||.++
T Consensus 3 i~~gd~V~v~Y~g~-~-dG~~fdss~------~~f~~G~g~vipG~e~aL~Gm~~------Ge~~~v~ipp~~aYG~~~- 67 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-V-EGEVLDQGE------LSYLHGHRNLIPGLEEALEGREE------GEAFQAHVPAEKAYGPHD- 67 (158)
T ss_dssp CCTTEEEEEEEEEE-E-TTEEEEEEE------EEEETTSSSSCHHHHHHHTTCBT------TCEEEEEECGGGTTCCCC-
T ss_pred CCCCCEEEEEEEEE-E-CCEEEEeeE------EEEEECCCCcChHHHHHHcCCCC------CCEEEEEECcHHHcCCCC-
Confidence 67899999999999 5 999999986 78999999999999999999999 899999999999999864
Q ss_pred CCCCCCCCcEEEEEEEeeee
Q psy8371 484 PPRIPAKADLLFEVHLINFS 503 (528)
Q Consensus 484 ~~~IPp~a~LvfeveL~~~~ 503 (528)
..+++++.+..|.
T Consensus 68 -------~~lv~~v~~~~f~ 80 (158)
T 3cgm_A 68 -------PEGVQVVPLSAFP 80 (158)
T ss_dssp -------GGGEEEEEGGGSC
T ss_pred -------cceEEEEEHHHCC
Confidence 4566666666664
No 53
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.06 E-value=2e-10 Score=122.44 Aligned_cols=89 Identities=13% Similarity=0.127 Sum_probs=80.1
Q ss_pred CCCCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEEEEEcCCCccCC
Q psy8371 401 GENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGA 480 (528)
Q Consensus 401 G~~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~~~vP~~layG~ 480 (528)
+++++.||.|++||+++. ||++|++++. .|+.|.+|.++++|||+++|.||++ |+++.+.+|+..+||.
T Consensus 155 ~~~~~~gD~V~i~y~g~~--dG~~fd~~~~---~~~~~~lG~g~~ipgfee~L~G~k~------Ge~~~v~v~~~~~yg~ 223 (432)
T 1w26_A 155 DGAVEAEDRVTIDFTGSV--DGEEFEGGKA---SDFVLAMGQGRMIPGFEDGIKGHKA------GEEFTIDVTFPEEYHA 223 (432)
T ss_dssp SSCCCTTCEEEECEEEES--SSCBCSSCCC---SSEEEETTSCCSCTTHHHHSSSCCS------SCEEEEEEECCTTCSC
T ss_pred CCCCCCCCEEEEEEEEee--CCeEccCCCc---cceEEEeCCCCcchHHHHHhCCCCC------CCEEEEEECCchhhCC
Confidence 456889999999999994 9999999873 5899999999999999999999999 8999999999999998
Q ss_pred CCCCCCCCCCCcEEEEEEEeeeecC
Q psy8371 481 LGCPPRIPAKADLLFEVHLINFSID 505 (528)
Q Consensus 481 ~g~~~~IPp~a~LvfeveL~~~~~~ 505 (528)
.+. ++.+++|+|+|.++...
T Consensus 224 ~~l-----ag~~~~F~V~v~~v~~~ 243 (432)
T 1w26_A 224 ENL-----KGKAAKFAINLKKVEER 243 (432)
T ss_dssp TTT-----SSCEEEEEEECCEECCE
T ss_pred CCC-----CCceEEEEEEEEEEecc
Confidence 753 56899999999998853
No 54
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.88 E-value=1e-08 Score=108.71 Aligned_cols=107 Identities=26% Similarity=0.364 Sum_probs=91.1
Q ss_pred hhccccCCCC-CCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCC---CchHHHHHHHhcCccccccCCCCEE
Q psy8371 393 GKIKEKGFGE-NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSS---GLIPAFEYAILSMQKGSLNLSGEKS 468 (528)
Q Consensus 393 ~k~Lp~g~G~-~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~---~li~g~eeaL~~M~~G~~~~~Ge~~ 468 (528)
.+++..|.|. .|..|+.|+|||++++ +|++|++ .++.|.+|.| .++++|++|+..|++ |+++
T Consensus 150 k~i~~~g~~~~~p~~g~~V~v~y~g~~--~g~~f~~------~~~~f~~g~g~~~~v~~~~e~al~~~~~------ge~~ 215 (457)
T 1kt0_A 150 RRTKRKGEGYSNPNEGATVEIHLEGRC--GGRMFDC------RDVAFTVGEGEDHDIPIGIDKALEKMQR------EEQC 215 (457)
T ss_dssp EEEEECCBCSCCCCTTCEEEEEEEEEE--TTEEEEE------EEEEEETTCGGGGTCCHHHHHHHTTCCB------TCEE
T ss_pred EEEEecCCCCCCCCCCCEEEEEEEEEe--CCeEEec------CceEEEeCCCccccCChHHHHHHHhCCC------CCEE
Confidence 3455566664 5999999999999988 7899996 2689999976 489999999999999 8999
Q ss_pred EEEEcCCCccCCCCCCC-CCCCCCcEEEEEEEeeeecCcccccchh
Q psy8371 469 DFFASYELCFGALGCPP-RIPAKADLLFEVHLINFSIDPQVVRSSA 513 (528)
Q Consensus 469 ~~~vP~~layG~~g~~~-~IPp~a~LvfeveL~~~~~~~~~~~~~~ 513 (528)
.+.++|.++||..|... .|||++++.|++++.++....+..+...
T Consensus 216 ~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A~~~~~~~~ 261 (457)
T 1kt0_A 216 ILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKAKESWEMDT 261 (457)
T ss_dssp EEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEECCCCGGGSCH
T ss_pred EEEECcccccCCCCCcccCCCCCCEEEEEhhhhhcccCcchhhcCH
Confidence 99999999999999653 5999999999999999998776555443
No 55
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=98.82 E-value=1.3e-09 Score=114.85 Aligned_cols=89 Identities=15% Similarity=0.188 Sum_probs=77.3
Q ss_pred CCCCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEEEEEcCCCccCC
Q psy8371 401 GENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGA 480 (528)
Q Consensus 401 G~~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~~~vP~~layG~ 480 (528)
.++++.||.|++||+++. ||++|+++.. .|+.|.+|.|++||||+++|.||++ |+++.+.+|....||.
T Consensus 158 ~~~~~~gD~V~i~y~g~~--dG~~fd~~~~---~~~~~~lG~g~~ipgfee~L~Gmk~------Ge~~~v~v~fp~dy~~ 226 (392)
T 1t11_A 158 DEAAENGKRVSIDFVGSI--DGVEFEGGKA---ENFPLEMGAGRMIPGFEDGIVGKTK------GMEFVIDVTFPEDYHA 226 (392)
T ss_dssp SCCCCTTCEEEEEEEEES--SSSCCTTCEE---EEEEEETTSCCBSTTSGGGTTTCCS------SCCCCEEEECCTTCSC
T ss_pred CCCCCCCCEEEEEEEEEE--CCEEccCCCc---cceEEEecCCCcchhHHHHhCCCCC------CCEEEEEEeCcccccc
Confidence 356889999999999984 8999998842 5899999999999999999999999 7999999986677887
Q ss_pred CCCCCCCCCCCcEEEEEEEeeeecC
Q psy8371 481 LGCPPRIPAKADLLFEVHLINFSID 505 (528)
Q Consensus 481 ~g~~~~IPp~a~LvfeveL~~~~~~ 505 (528)
.+. ++.+++|+|+|.++...
T Consensus 227 ~~l-----aGk~~~F~V~v~~i~~~ 246 (392)
T 1t11_A 227 ENL-----KGKAAKFAIKVNKVEAR 246 (392)
T ss_dssp TTT-----SSCEEEECCCEEEEEEE
T ss_pred CCC-----CCCeEEEEEEEEEEEcC
Confidence 543 57999999999999853
No 56
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.03 E-value=0.00085 Score=71.42 Aligned_cols=75 Identities=13% Similarity=0.139 Sum_probs=62.7
Q ss_pred CCcCCeEEEEEEEEEEccCceeeeecCCCCCcceEEecCCCCchHHHHHHHhcCccccccCCCCEEEEEEcCCCccCCCC
Q psy8371 403 NPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALG 482 (528)
Q Consensus 403 ~p~~Gd~V~v~Y~g~~~~dG~~fdss~~~~~~P~~f~lG~~~li~g~eeaL~~M~~G~~~~~Ge~~~~~vP~~layG~~g 482 (528)
+++.||.|+++|+++. ||..|+++.. .++.+.+|++. + |+++|.||++ |++..|.+..
T Consensus 154 ~a~~gD~V~id~~~~~--dG~~~~~~~~---~~~~l~~g~~~--~-fe~~liG~k~------Ge~~~~~vtF-------- 211 (433)
T 3gty_X 154 PAEAGDLVRVNMEVYN--EEGKKLTSRE---YEYVISEDEDR--P-FVKDLVGKKK------GDVVEIEREY-------- 211 (433)
T ss_dssp CCCTTSEEEEEEEEEC--TTSCEEEEEE---EEEECCSSCCC--T-THHHHTTCCT------TCEEEEEEEE--------
T ss_pred ccCCCCEEEEEEEEEE--CCEECcCCCC---CCeEEEecCCc--h-HHHHhCCCCC------CceEEEEEee--------
Confidence 5789999999999984 8999997643 47888899887 4 9999999999 7999988843
Q ss_pred CCCCCCCCCcEEEEEEEeeeecC
Q psy8371 483 CPPRIPAKADLLFEVHLINFSID 505 (528)
Q Consensus 483 ~~~~IPp~a~LvfeveL~~~~~~ 505 (528)
++.+..|.|+|.+++..
T Consensus 212 ------aGk~a~F~VtV~~Ik~~ 228 (433)
T 3gty_X 212 ------EGKKYTYKLEVEEVYKR 228 (433)
T ss_dssp ------TTEEEEEEEEEEEEEEE
T ss_pred ------CCCeEEEEEEEEEEEEe
Confidence 35689999999999853
No 57
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=69.03 E-value=10 Score=38.16 Aligned_cols=85 Identities=15% Similarity=0.117 Sum_probs=54.7
Q ss_pred CcHHHHHHHHHCCCCeEEEEccCCCCCCCCCCCCChHHHHHHHHHhcCCCeeEcCCCCChHHHHHhcCCCCCcEEEEecc
Q psy8371 31 AALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENL 110 (528)
Q Consensus 31 ~~lpTI~~l~~~gak~vil~sHlGRP~g~~~~~~Sl~~~a~~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~illLEN~ 110 (528)
=++|+++.|+++|..++.+.+|-.||.|. ..++.-.|+.++- +..|.||.-..+.-.++..+.++++++-=+++.-.-
T Consensus 13 fa~~~L~~L~~~~~~v~~Vvt~pd~~~gr-g~~l~~~~v~~~A-~~~gIpv~~~~~~~~~~~~~~l~~~~~Dliv~~~~~ 90 (314)
T 3tqq_A 13 FAVPTLRALIDSSHRVLAVYTQPDRPSGR-GQKIMESPVKEIA-RQNEIPIIQPFSLRDEVEQEKLIAMNADVMVVVAYG 90 (314)
T ss_dssp GGHHHHHHHHHSSSEEEEEECCCC-----------CCHHHHHH-HHTTCCEECCSCSSSHHHHHHHHTTCCSEEEEESCC
T ss_pred HHHHHHHHHHHCCCeEEEEEeCCCCcccc-CCccCCCHHHHHH-HHcCCCEECcccCCCHHHHHHHHhcCCCEEEEcCcc
Confidence 46799999999998877788998899762 1233334544443 446889755555556788888999888666666666
Q ss_pred cCccccc
Q psy8371 111 RFYVEEE 117 (528)
Q Consensus 111 Rf~~~E~ 117 (528)
|+.+.+.
T Consensus 91 ~ilp~~i 97 (314)
T 3tqq_A 91 LILPKKA 97 (314)
T ss_dssp SCCCHHH
T ss_pred cccCHHH
Confidence 7776543
No 58
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=61.79 E-value=13 Score=37.52 Aligned_cols=85 Identities=13% Similarity=0.115 Sum_probs=53.4
Q ss_pred CcHHHHHHHHHCCCCeEEEEccCCCCCCCCCCCCChHHHHHHHHHhcCCCeeEcCCCCChHHHHHhcCCCCCcEEEEecc
Q psy8371 31 AALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENL 110 (528)
Q Consensus 31 ~~lpTI~~l~~~gak~vil~sHlGRP~g~~~~~~Sl~~~a~~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~illLEN~ 110 (528)
=++|+++.|+++|..++.+.++-.||.|. ..++.-.|+.+ +.+..|.||.-..+.-.++..+.++++++-=+++.-.-
T Consensus 18 fa~~~L~~L~~~~~~v~~Vvt~pd~p~gr-g~~~~~~~v~~-~A~~~gIpv~~~~~~~~~~~~~~l~~~~~Dliv~~~y~ 95 (318)
T 3q0i_A 18 FAARHLAALLSSEHEIIAVYTQPERPAGR-GKKLTASPVKT-LALEHNVPVYQPENFKSDESKQQLAALNADLMVVVAYG 95 (318)
T ss_dssp HHHHHHHHHHTSSSEEEEEECCCC----------CCCHHHH-HHHHTTCCEECCSCSCSHHHHHHHHTTCCSEEEESSCC
T ss_pred HHHHHHHHHHHCCCcEEEEEcCCCCcccc-cccCCCCHHHH-HHHHcCCCEEccCcCCCHHHHHHHHhcCCCEEEEeCcc
Confidence 46799999999999877788988899762 12333345444 44456899854455556788888888887555555566
Q ss_pred cCccccc
Q psy8371 111 RFYVEEE 117 (528)
Q Consensus 111 Rf~~~E~ 117 (528)
|+.+++.
T Consensus 96 ~ilp~~~ 102 (318)
T 3q0i_A 96 LLLPKVV 102 (318)
T ss_dssp SCCCHHH
T ss_pred ccCCHHH
Confidence 6665443
No 59
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=61.49 E-value=8.5 Score=38.92 Aligned_cols=84 Identities=12% Similarity=0.061 Sum_probs=58.3
Q ss_pred CcHHHHHHHHHCCCCeEEEEccCCCCCCCCCCCCChHHHHHHHHHhcCCCeeEcCCCCChHHHHHhcCCCCCcEEEEecc
Q psy8371 31 AALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENL 110 (528)
Q Consensus 31 ~~lpTI~~l~~~gak~vil~sHlGRP~g~~~~~~Sl~~~a~~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~illLEN~ 110 (528)
=++|+++.|+++|..++.+.+|-.||.|. ..++.-.|+.++-. ..|.||.-..+.-.++..+.++++++-=+++.-.-
T Consensus 15 fa~~~L~~L~~~~~~v~~Vvt~pd~~~gR-g~~l~~~pv~~~A~-~~gIpv~~~~~~~~~~~~~~l~~~~~Dliv~~~y~ 92 (317)
T 3rfo_A 15 FSVPVLRRLIEDGYDVIGVVTQPDRPVGR-KKVLTPTPVKVEAE-KHGIPVLQPLRIREKDEYEKVLALEPDLIVTAAFG 92 (317)
T ss_dssp THHHHHHHHHHTTCEEEEEECCCCCEETT-TTEECCCHHHHHHH-HTTCCEECCSCTTSHHHHHHHHHHCCSEEEESSCC
T ss_pred HHHHHHHHHHHCCCcEEEEEeCCCcccCC-CcccCCCHHHHHHH-HcCCCEEccccCCCHHHHHHHHhcCCCEEEEcCch
Confidence 47899999999998877788998888763 23444455555443 45889865556667777788888777555555555
Q ss_pred cCcccc
Q psy8371 111 RFYVEE 116 (528)
Q Consensus 111 Rf~~~E 116 (528)
|+.+.+
T Consensus 93 ~ilp~~ 98 (317)
T 3rfo_A 93 QIVPNE 98 (317)
T ss_dssp SCCCHH
T ss_pred hhCCHH
Confidence 666544
No 60
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=56.30 E-value=18 Score=36.13 Aligned_cols=81 Identities=16% Similarity=0.063 Sum_probs=53.2
Q ss_pred cHHHHHHHHHCCCCeEEEEccCCCCCCCCCCCCChHHHHHHHHHhcCCCeeEcCCCCChHHHHHhcCCCCCcEEEEeccc
Q psy8371 32 ALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLR 111 (528)
Q Consensus 32 ~lpTI~~l~~~gak~vil~sHlGRP~g~~~~~~Sl~~~a~~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~illLEN~R 111 (528)
+.|+++.|++++..++.+.++-.||.|+ +...|+.++- +..|.||...++.-.++..+.++++++-=+++.-.-|
T Consensus 12 a~~~L~~L~~~~~~i~~Vvt~~d~~~g~----~~~~~v~~~A-~~~gIpv~~~~~~~~~~~~~~l~~~~~Dliv~~~y~~ 86 (305)
T 2bln_A 12 GCLGIEALLAAGYEISAIFTHTDNPGEK----AFYGSVARLA-AERGIPVYAPDNVNHPLWVERIAQLSPDVIFSFYYRH 86 (305)
T ss_dssp HHHHHHHHHHTTCEEEEEECCCC----------CCCCHHHHH-HHHTCCEECCSCCCSHHHHHHHHHTCCSEEEEESCCS
T ss_pred HHHHHHHHHHCCCcEEEEEcCCCCCCCC----cCccHHHHHH-HHcCCCEECCCcCCcHHHHHHHHhcCCCEEEEecccc
Confidence 5789999999999877788888888763 2223343333 4458998877776667788888888775555555667
Q ss_pred Cccccc
Q psy8371 112 FYVEEE 117 (528)
Q Consensus 112 f~~~E~ 117 (528)
+.+.+.
T Consensus 87 ilp~~i 92 (305)
T 2bln_A 87 LIYDEI 92 (305)
T ss_dssp CCCHHH
T ss_pred ccCHHH
Confidence 766543
No 61
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=56.25 E-value=19 Score=36.16 Aligned_cols=83 Identities=14% Similarity=0.091 Sum_probs=54.4
Q ss_pred cHHHHHHHHHCCCCeEEEEccCCCCCCCCCCCCChHHHHHHHHHhcCCCeeEcCCCCChHHHHHhcCCCCCcEEEEeccc
Q psy8371 32 ALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLR 111 (528)
Q Consensus 32 ~lpTI~~l~~~gak~vil~sHlGRP~g~~~~~~Sl~~~a~~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~illLEN~R 111 (528)
+.|+++.|+++|..++.+.++-.||.|. ..++.-.|+.++- +..|.||.-..++-.++..+.++++++-=+++.---|
T Consensus 15 a~~~L~~L~~~~~~i~~Vvt~pd~p~gr-g~~~~~~~v~~~A-~~~gIpv~~~~~~~~~~~~~~l~~~~~Dliv~~~y~~ 92 (314)
T 1fmt_A 15 AARHLDALLSSGHNVVGVFTQPDRPAGR-GKKLMPSPVKVLA-EEKGLPVFQPVSLRPQENQQLVAELQADVMVVVAYGL 92 (314)
T ss_dssp HHHHHHHHHHTTCEEEEEECCCCBC-------CBCCHHHHHH-HHTTCCEECCSCSCSHHHHHHHHHTTCSEEEEESCCS
T ss_pred HHHHHHHHHHCCCcEEEEEeCCCCcccc-ccccCcCHHHHHH-HHcCCcEEecCCCCCHHHHHHHHhcCCCEEEEeeccc
Confidence 5899999999998866688887788763 2344444555544 4568998544455467788888888775556656667
Q ss_pred Ccccc
Q psy8371 112 FYVEE 116 (528)
Q Consensus 112 f~~~E 116 (528)
+.+.+
T Consensus 93 ilp~~ 97 (314)
T 1fmt_A 93 ILPKA 97 (314)
T ss_dssp CCCHH
T ss_pred cCCHH
Confidence 76544
No 62
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=26.83 E-value=73 Score=34.64 Aligned_cols=81 Identities=16% Similarity=0.063 Sum_probs=51.1
Q ss_pred cHHHHHHHHHCCCCeEEEEccCCCCCCCCCCCCChHHHHHHHHHhcCCCeeEcCCCCChHHHHHhcCCCCCcEEEEeccc
Q psy8371 32 ALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLR 111 (528)
Q Consensus 32 ~lpTI~~l~~~gak~vil~sHlGRP~g~~~~~~Sl~~~a~~L~~~l~~~V~f~~d~~g~~~~~~i~~l~~g~illLEN~R 111 (528)
+.|+++.|++++..++.++|+-.+|.|+ +...|+.++- +..|.||...++.-.++..+.++++++-=|++.---|
T Consensus 12 ~~~~l~~l~~~~~~i~~v~t~~~~~~~~----~~~~~~~~~a-~~~~ip~~~~~~~~~~~~~~~l~~~~~d~iv~~~~~~ 86 (660)
T 1z7e_A 12 GCLGIEALLAAGYEISAIFTHTDNPGEK----AFYGSVARLA-AERGIPVYAPDNVNHPLWVERIAQLSPDVIFSFYYRH 86 (660)
T ss_dssp HHHHHHHHHHTTCEEEEEECCCC------------CCHHHHH-HHHTCCEECCSCTTSHHHHHHHHHHCCSEEEEESCCS
T ss_pred HHHHHHHHHhCCCCEEEEEeCCCCCccC----cCccHHHHHH-HHcCCCEeccCCCCcHHHHHHHHhcCCCEEEEcCccc
Confidence 4789999999999877788887777652 2333343333 4458998776666567777788888775455555566
Q ss_pred Cccccc
Q psy8371 112 FYVEEE 117 (528)
Q Consensus 112 f~~~E~ 117 (528)
+.+.+.
T Consensus 87 il~~~~ 92 (660)
T 1z7e_A 87 LIYDEI 92 (660)
T ss_dssp CCCHHH
T ss_pred ccCHHH
Confidence 666553
No 63
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=24.98 E-value=2.2e+02 Score=26.71 Aligned_cols=67 Identities=22% Similarity=0.195 Sum_probs=41.7
Q ss_pred cccCCCEEEEEecC-CCCCCCCcHHHHHHHHHCCCCeEEEEccCCCCCCCCCCCCChHHHHHHHHHhcCCCeeEc-CCCC
Q psy8371 11 LNLAGKRVLMRVDF-NVPMKEAALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFL-DDCV 88 (528)
Q Consensus 11 ~~~~gk~VlvRvD~-NvP~~~~~lpTI~~l~~~gak~vil~sHlGRP~g~~~~~~Sl~~~a~~L~~~l~~~V~f~-~d~~ 88 (528)
++|+||++||--=- +.=| -.-+-+.|.++||+ |++..+ .. -+++.+++.+++.-+.++.++ -|+.
T Consensus 2 ~~l~gK~alVTGaa~~~GI---G~aiA~~la~~Ga~-Vvi~~r---~~------~~~~~~~~~~~~~~~~~~~~~~~Dv~ 68 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSI---AFGVAKVLDQLGAK-LVFTYR---KE------RSRKELEKLLEQLNQPEAHLYQIDVQ 68 (256)
T ss_dssp CCCTTCEEEEECCCSTTCH---HHHHHHHHHHTTCE-EEEEES---SG------GGHHHHHHHHGGGTCSSCEEEECCTT
T ss_pred cCCCCCEEEEECCCCCchH---HHHHHHHHHHCCCE-EEEEEC---CH------HHHHHHHHHHHhcCCCcEEEEEccCC
Confidence 37899999986210 0001 14567889999998 777743 21 257777777777655556554 4654
Q ss_pred Ch
Q psy8371 89 GP 90 (528)
Q Consensus 89 g~ 90 (528)
.+
T Consensus 69 ~~ 70 (256)
T 4fs3_A 69 SD 70 (256)
T ss_dssp CH
T ss_pred CH
Confidence 43
No 64
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=20.81 E-value=1.4e+02 Score=28.74 Aligned_cols=65 Identities=18% Similarity=0.153 Sum_probs=39.8
Q ss_pred cccCCCEEEEEecCCCCCCCCcHHHHHHHHHCCCCeEEEEccCCCCCCCCCCCCChHHHHHHHHHhcCCCeeEc-CCCCC
Q psy8371 11 LNLAGKRVLMRVDFNVPMKEAALDTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFL-DDCVG 89 (528)
Q Consensus 11 ~~~~gk~VlvRvD~NvP~~~~~lpTI~~l~~~gak~vil~sHlGRP~g~~~~~~Sl~~~a~~L~~~l~~~V~f~-~d~~g 89 (528)
|||+||++||--=- ..==.-+-+.|.++||+ |++.. |-. -.++..++.|++. |.++.++ -|+..
T Consensus 5 f~L~gKvalVTGas----~GIG~aia~~la~~Ga~-Vvi~~---~~~------~~~~~~~~~l~~~-g~~~~~~~~Dv~~ 69 (255)
T 4g81_D 5 FDLTGKTALVTGSA----RGLGFAYAEGLAAAGAR-VILND---IRA------TLLAESVDTLTRK-GYDAHGVAFDVTD 69 (255)
T ss_dssp TCCTTCEEEETTCS----SHHHHHHHHHHHHTTCE-EEECC---SCH------HHHHHHHHHHHHT-TCCEEECCCCTTC
T ss_pred cCCCCCEEEEeCCC----cHHHHHHHHHHHHCCCE-EEEEE---CCH------HHHHHHHHHHHhc-CCcEEEEEeeCCC
Confidence 58999999973000 00113366789999998 77763 321 1477778888775 5566554 45544
Q ss_pred h
Q psy8371 90 P 90 (528)
Q Consensus 90 ~ 90 (528)
+
T Consensus 70 ~ 70 (255)
T 4g81_D 70 E 70 (255)
T ss_dssp H
T ss_pred H
Confidence 3
No 65
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=20.68 E-value=2.2e+02 Score=24.22 Aligned_cols=54 Identities=13% Similarity=0.031 Sum_probs=38.2
Q ss_pred HHHHHHHHCCCCeEEEEccCCCCCCCCCCCCChHHHHHHHHHhcCCCeeEcCCCCChHHHHHhc
Q psy8371 34 DTIKYALDKGAKSVVLMSHLGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACA 97 (528)
Q Consensus 34 pTI~~l~~~gak~vil~sHlGRP~g~~~~~~Sl~~~a~~L~~~l~~~V~f~~d~~g~~~~~~i~ 97 (528)
.|++.|-...|+ +|+++|---| ..+.-+.+.|.+..+.|+.|+++ ..+.-+++-
T Consensus 27 ~v~kai~~gkak-LViiA~D~~~-------~~~~~~l~~lc~~~~VP~~~v~s--k~eLG~a~g 80 (121)
T 2lbw_A 27 EVVKALRKGEKG-LVVIAGDIWP-------ADVISHIPVLCEDHSVPYIFIPS--KQDLGAAGA 80 (121)
T ss_dssp HHHHHHHHSCCC-EEEECTTCSC-------TTHHHHHHHHHHHTCCCEEECCC--HHHHHHHHT
T ss_pred HHHHHHHcCCce-EEEEeCCCCH-------HHHHHHHHHHHHhcCCcEEEECC--HHHHHHHhC
Confidence 578888888898 7888874333 35677778888999999998874 233444443
Done!