RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8371
(528 letters)
>d1ltka_ c.86.1.1 (A:) Phosphoglycerate kinase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 417
Score = 389 bits (1001), Expect = e-132
Identities = 237/403 (58%), Positives = 304/403 (75%), Gaps = 11/403 (2%)
Query: 4 NKLSV-DLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSH 52
NKLS+ DL ++ K+VL+RVDFNVP++ A L TI + +GA ++L+SH
Sbjct: 6 NKLSISDLKDIKNKKVLVRVDFNVPIENGIIKDTNRITATLPTINHLKKEGASKIILISH 65
Query: 53 LGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRF 112
GRPDG +N KY+LKPVAE LK LL +++ FL+DCVG +VE+ S+ILLENLRF
Sbjct: 66 CGRPDGLRNEKYTLKPVAETLKGLLGEEVLFLNDCVGKEVEDKINAAKENSVILLENLRF 125
Query: 113 YVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQR 172
++EEEGKGV+A G KVKA+ EDV+KF+ L KL D+++NDAFGTAHRAHSSM+G +
Sbjct: 126 HIEEEGKGVDANGNKVKANKEDVEKFQNDLTKLADVFINDAFGTAHRAHSSMVGVKLNVK 185
Query: 173 ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232
ASGFL+KKEL+YFSKAL+NP++P LAILGGAKV+DKIQLI+NLLDKV+ MIIGGGM+YTF
Sbjct: 186 ASGFLMKKELEYFSKALENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRMIIGGGMAYTF 245
Query: 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVE 292
K L M IG SL+D G+KIV +++EKA+ NV++ PVDF AD F +A T T E
Sbjct: 246 KKVLNNMKIGTSLFDEAGSKIVGEIMEKAKAKNVQIFLPVDFKIADNFDNNANTKFVTDE 305
Query: 293 SGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTT 352
G+PD WMGLD GPKS E +K+ I +K ++WNGP GVFE NFAKG+ ++ VV+VT
Sbjct: 306 EGIPDNWMGLDAGPKSIENYKDVILTSKTVIWNGPQGVFEMPNFAKGSIECLNLVVEVTK 365
Query: 353 KGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLEGKI 395
KGAITI+GGGDTA+ + N ++++SHVSTGGGASLELLEGK
Sbjct: 366 KGAITIVGGGDTASLVEQQNKKNEISHVSTGGGASLELLEGKE 408
>d1hdia_ c.86.1.1 (A:) Phosphoglycerate kinase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 413
Score = 388 bits (998), Expect = e-132
Identities = 273/403 (67%), Positives = 317/403 (78%), Gaps = 11/403 (2%)
Query: 4 NKLSVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSHL 53
NKL++D LN+ GKRV+MRVDFNVPM +AA+ +IK+ LD GAKSVVLMSHL
Sbjct: 1 NKLTLDKLNVKGKRVVMRVDFNVPMAAAQITNNARIKAAVPSIKFCLDDGAKSVVLMSHL 60
Query: 54 GRPDGSKNL-KYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRF 112
GRPDGS KYSL+PVA ELK+ L K + FL DCVGP VE+ACADP AGS+ILLENLRF
Sbjct: 61 GRPDGSPMPDKYSLQPVAAELKSALGKAVLFLKDCVGPAVEKACADPAAGSVILLENLRF 120
Query: 113 YVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQR 172
+VEEEGKG +A+G K +K FR SL LGD+YVNDAFGTAHRAHSSM+G ++
Sbjct: 121 HVEEEGKGKDASGNKAAGEPAKIKAFRASLSALGDVYVNDAFGTAHRAHSSMVGVNLPKK 180
Query: 173 ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232
A FL+KKEL+YF+ A ++PE+PFLAILGGAKVADKIQLI N+LDKVNEMIIGGGM++TF
Sbjct: 181 AGAFLMKKELNYFAAAAESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTF 240
Query: 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVE 292
LK L M IG SL+D G KIVK L+ KA N VK+ PVDF+TADKF E AK G+ATV
Sbjct: 241 LKVLNNMEIGTSLFDEAGKKIVKNLMSKAAANGVKITLPVDFVTADKFDEQAKIGQATVA 300
Query: 293 SGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTT 352
SG+P GWMGLD GPKS + E +ARAK IVWNGP GVFE+E FA+GTK +MD VV T+
Sbjct: 301 SGIPAGWMGLDCGPKSSAKYSEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATS 360
Query: 353 KGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLEGKI 395
+G ITIIGGGDTATC AKWNTED VSHVSTGGGASLELLEGK+
Sbjct: 361 RGCITIIGGGDTATCCAKWNTEDNVSHVSTGGGASLELLEGKV 403
>d1qpga_ c.86.1.1 (A:) Phosphoglycerate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 415
Score = 387 bits (996), Expect = e-132
Identities = 246/402 (61%), Positives = 299/402 (74%), Gaps = 11/402 (2%)
Query: 4 NKLSVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSHL 53
+KLSV L+L KRV +RVDFNVP+ AAL TIKY L+ + VVL SHL
Sbjct: 4 SKLSVQDLDLKDKRVFIRVDFNVPLDGKKITSNQRIVAALPTIKYVLEHHPRYVVLASHL 63
Query: 54 GRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFY 113
G+P+G +N KYSL PVA+EL++LL KD+TFL+DCVGP+VE A GS+ILLENLR++
Sbjct: 64 GQPNGERNEKYSLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYH 123
Query: 114 VEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEGFEQRA 173
+EEEG G+KVKAS EDV+KFR L L D+Y+NDAFGTAHRAHSSM+G QRA
Sbjct: 124 IEEEGSR-KVDGQKVKASKEDVQKFRHELSSLADVYINDAFGTAHRAHSSMVGFDLPQRA 182
Query: 174 SGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFL 233
+GFLL+KEL YF KAL+NP +PFLAILGGAKVADKIQLI+NLLDKV+ +IIGGGM++TF
Sbjct: 183 AGFLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTFK 242
Query: 234 KELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVES 293
K L+ IG S++D GA+IV KL+EKA+ V++ PVDFI AD F+ DA T T +
Sbjct: 243 KVLENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDKE 302
Query: 294 GVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTK 353
G+P GW GLD GP+SR+LF +A+AK IVWNGP GVFEFE FA GTK ++D VV +
Sbjct: 303 GIPAGWQGLDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAA 362
Query: 354 GAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLEGKI 395
G IIGGGDTAT A K+ DK+SHVSTGGGASLELLEGK
Sbjct: 363 GNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELLEGKE 404
>d1phpa_ c.86.1.1 (A:) Phosphoglycerate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 394
Score = 357 bits (918), Expect = e-120
Identities = 176/404 (43%), Positives = 258/404 (63%), Gaps = 31/404 (7%)
Query: 3 LNKLSVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSH 52
+NK ++ +++ GKRV RVDFNVPM+ AAL TI+Y ++ GAK V+L SH
Sbjct: 1 MNKKTIRDVDVRGKRVFCRVDFNVPMEQGAITDDTRIRAALPTIRYLIEHGAK-VILASH 59
Query: 53 LGRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRF 112
LGRP G + L VA+ L LL++ + ++ VG +V+ A G ++LLEN+RF
Sbjct: 60 LGRPKGKVVEELRLDAVAKRLGELLERPVAKTNEAVGDEVKAAVDRLNEGDVLLLENVRF 119
Query: 113 YVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEG-FEQ 171
Y EE ++ + ++ +L D+YVNDAFG AHRAH+S G +
Sbjct: 120 YPGEE---------------KNDPELAKAFAELADLYVNDAFGAAHRAHASTEGIAHYLP 164
Query: 172 RASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYT 231
+GFL++KEL+ KAL NP++PF AI+GGAKV DKI +I+NLL+KV+ +IIGGG++YT
Sbjct: 165 AVAGFLMEKELEVLGKALSNPDRPFTAIIGGAKVKDKIGVIDNLLEKVDNLIIGGGLAYT 224
Query: 232 FLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATV 291
F+K G ++G SL + + ++ K +EKA++ V+ + PVD + AD+FA DA T +
Sbjct: 225 FVK-ALGHDVGKSLLEEDKIELAKSFMEKAKEKGVRFYMPVDVVVADRFANDANTKVVPI 283
Query: 292 ESGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVT 351
++ +P W LDIGPK+REL+++ I +K++VWNGP GVFE + FA GTK I +A+ +
Sbjct: 284 DA-IPADWSALDIGPKTRELYRDVIRESKLVVWNGPMGVFEMDAFAHGTKAIAEALAEAL 342
Query: 352 TKGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLEGKI 395
++IGGGD+A K+ DK+ H+STGGGASLE +EGK
Sbjct: 343 --DTYSVIGGGDSAAAVEKFGLADKMDHISTGGGASLEFMEGKQ 384
>d1vpea_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermotoga maritima
[TaxId: 2336]}
Length = 398
Score = 337 bits (865), Expect = e-112
Identities = 187/403 (46%), Positives = 266/403 (66%), Gaps = 28/403 (6%)
Query: 4 NKLSVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSHL 53
K+++ ++L GKRV+MRVDFNVP+K AAL TIKYAL++GAK V+L+SHL
Sbjct: 1 EKMTIRDVDLKGKRVIMRVDFNVPVKDGVVQDDTRIRAALPTIKYALEQGAK-VILLSHL 59
Query: 54 GRPDGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFY 113
GRP G + ++SL PVA+ L LL K++ F+ VG +V++A + G ++LLEN RF+
Sbjct: 60 GRPKGEPSPEFSLAPVAKRLSELLGKEVKFVPAVVGDEVKKAVEELKEGEVLLLENTRFH 119
Query: 114 VEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLG-EGFEQR 172
E ++ + + L DI+VNDAFGTAHRAH+S +G F
Sbjct: 120 PGET---------------KNDPELAKFWASLADIHVNDAFGTAHRAHASNVGIAQFIPS 164
Query: 173 ASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTF 232
+GFL++KE+ + SK NPEKP++ +LGGAKV+DKI +I NL++K + ++IGG M +TF
Sbjct: 165 VAGFLMEKEIKFLSKVTYNPEKPYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFTF 224
Query: 233 LKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVE 292
LK G +G S + + + K+LVEKA++ V++ PVD + A K + ++
Sbjct: 225 LK-ALGKEVGSSRVEEDKIDLAKELVEKAKEKGVEIVLPVDAVIAQKIEPGVEKKVVRID 283
Query: 293 SGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTT 352
G+P+GWMGLDIGP++ ELFK+ ++ AK +VWNGP GVFE ++FA+GTK + A+ +T
Sbjct: 284 DGIPEGWMGLDIGPETIELFKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAALTE 343
Query: 353 KGAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLEGKI 395
KGAIT++GGGD+A K+ EDK SHVSTGGGASLE LEGK
Sbjct: 344 KGAITVVGGGDSAAAVNKFGLEDKFSHVSTGGGASLEFLEGKE 386
>d1v6sa_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermus thermophilus
[TaxId: 274]}
Length = 390
Score = 297 bits (760), Expect = 8e-97
Identities = 147/400 (36%), Positives = 227/400 (56%), Gaps = 32/400 (8%)
Query: 7 SVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSHLGRP 56
++ L+ GKRVL+RVD+NVP++ +L T+++ L GA +VL+SHLGRP
Sbjct: 3 TLLDLDPKGKRVLVRVDYNVPVQDGKVQDETRILESLPTLRHLLAGGAS-LVLLSHLGRP 61
Query: 57 DGSKNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEE 116
G + KYSL PV E L+ L + + G ++LLEN+RF E
Sbjct: 62 KG-PDPKYSLAPVGEALRAHLPEARFAPFPPGSEEARREAEALRPGEVLLLENVRFEPGE 120
Query: 117 EGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAHRAHSSMLGEG-FEQRASG 175
E ++ + +LG+ +V DAFG+AHRAH+S++G +G
Sbjct: 121 E---------------KNDPELSARYARLGEAFVLDAFGSAHRAHASVVGVARLLPAYAG 165
Query: 176 FLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLLDKVNEMIIGGGMSYTFLKE 235
FL++KE+ S+ L +PE+P+ +LGGAKV+DKI +IE+LL +++ ++IGG M++TFLK
Sbjct: 166 FLMEKEVRALSRLLKDPERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLK- 224
Query: 236 LKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITADKFAEDAKTGEATVESGV 295
G +G SL + + + K L+ +AE V+++ P D + A++ +T + +
Sbjct: 225 ALGGEVGRSLVEEDRLDLAKDLLGRAEALGVRVYLPEDVVAAERIEAGVETRVFPARA-I 283
Query: 296 PDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENFAKGTKGIMDAVVDVTTKGA 355
P +MGLDIGPK+RE F + A+ + WNGP GVFE F +GT + A+ +GA
Sbjct: 284 PVPYMGLDIGPKTREAFARALEGARTVFWNGPMGVFEVPPFDEGTLAVGQAIA--ALEGA 341
Query: 356 ITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLEGKI 395
T++GGGD+ + +++ HVSTGGGASLE LE
Sbjct: 342 FTVVGGGDSVAAVNRLGLKERFGHVSTGGGASLEFLEKGT 381
>d16pka_ c.86.1.1 (A:) Phosphoglycerate kinase {Trypanosoma brucei
[TaxId: 5691]}
Length = 415
Score = 278 bits (712), Expect = 2e-89
Identities = 168/420 (40%), Positives = 242/420 (57%), Gaps = 45/420 (10%)
Query: 5 KLSVDLLNLAGKRVLMRVDFNVPMK----------EAALDTIKYALDKGAKSVVLMSHLG 54
K S++ +L GK+VL+RVDFNVP+K +AL T+K L +G VLMSHLG
Sbjct: 2 KKSINECDLKGKKVLIRVDFNVPVKNGKITNDYRIRSALPTLKKVLTEGGS-CVLMSHLG 60
Query: 55 RPDGSK----------------NLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACAD 98
RP G K +LKPVA+ L LL + +TF DC+ +
Sbjct: 61 RPKGIPMAQAGKIRSTGGVPGFQQKATLKPVAKRLSELLLRPVTFAPDCLNAADVVSKMS 120
Query: 99 PPAGSIILLENLRFYVEEEGKGVNAAGEKVKASAEDVKKFRESLRKLGDIYVNDAFGTAH 158
P ++LLEN+RFY EE K K L GD+Y++DAFGTAH
Sbjct: 121 PG--DVVLLENVRFYKEEGSKKAKDREAMAK-----------ILASYGDVYISDAFGTAH 167
Query: 159 RAHSSMLG--EGFEQRASGFLLKKELDYFSKALDNPEKPFLAILGGAKVADKIQLIENLL 216
R ++M G + A+G+L++KE+ YF+K L NP +P +AI+GGAKV+DKIQL++N+L
Sbjct: 168 RDSATMTGIPKILGNGAAGYLMEKEISYFAKVLGNPPRPLVAIVGGAKVSDKIQLLDNML 227
Query: 217 DKVNEMIIGGGMSYTFLKELKGMNIGGSLYDPEGAKIVKKLVEKAEKNNVKLHFPVDFIT 276
+++ ++IGG M+YTF + +G +IG S + + + L++KAE V++ P+D +
Sbjct: 228 QRIDYLLIGGAMAYTF-LKAQGYSIGKSKCEESKLEFARSLLKKAEDRKVQVILPIDHVC 286
Query: 277 ADKFAEDAKTGEATVESGVPDGWMGLDIGPKSRELFKEPIARAKVIVWNGPSGVFEFENF 336
+F T + +P+G M LDIGPK+ E + + I + K +WNGP GVFE +
Sbjct: 287 HTEFKAVDSP-LITEDQNIPEGHMALDIGPKTIEKYVQTIGKCKSAIWNGPMGVFEMVPY 345
Query: 337 AKGTKGIMDAVVDVTTK-GAITIIGGGDTATCAAKWNTEDKVSHVSTGGGASLELLEGKI 395
+KGT I A+ T + G ++IIGGGD+A+ A ++SHVSTGGGASLELLEGK
Sbjct: 346 SKGTFAIAKAMGRGTHEHGLMSIIGGGDSASAAELSGEAKRMSHVSTGGGASLELLEGKT 405
>d1r9ha_ d.26.1.1 (A:) FKB-6, N-terminal domain {Caenorhabditis
elegans [TaxId: 6239]}
Length = 118
Score = 55.5 bits (133), Expect = 3e-10
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 394 KIKEKGFG-ENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYA 452
IK++G G P G V+VHY+ E G+ +I ++
Sbjct: 15 LIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGN--VIKGWDLG 72
Query: 453 ILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFS 503
+ +M KG E ++F + +G G PP+IP A L+FEV L +S
Sbjct: 73 VATMTKG------EVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVELFEWS 117
>d1q1ca1 d.26.1.1 (A:21-140) FKBP52, N-terminal domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 120
Score = 54.4 bits (130), Expect = 8e-10
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 394 KIKEKGFG-ENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYA 452
IK +G G E P++G V VHY + + F LG +I A++ A
Sbjct: 16 VIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLD--RKDKFSFDLGKGEVIKAWDIA 73
Query: 453 ILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
I +M+ G E E +G+ G PP+IP A L+FEV L F
Sbjct: 74 IATMKVG------EVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEF 117
>d1yata_ d.26.1.1 (A:) Calcineurin (FKBP12.6) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 113
Score = 53.6 bits (128), Expect = 1e-09
Identities = 27/120 (22%), Positives = 44/120 (36%), Gaps = 13/120 (10%)
Query: 389 ELLEGKIK----EKGFG-ENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSS 443
E++EG +K G G P G V +HY E + +G
Sbjct: 2 EVIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQ- 60
Query: 444 GLIPAFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFS 503
+I ++ I + G EK+ +G G P IP + L+F+V L+ +
Sbjct: 61 -VIKGWDVGIPKLSVG------EKARLTIPGPYAYGPRGFPGLIPPNSTLVFDVELLKVN 113
>d1kt1a2 d.26.1.1 (A:28-138) FKBP51, N-terminal domains {Monkey
(Saimiri boliviensis) [TaxId: 27679]}
Length = 111
Score = 49.8 bits (118), Expect = 3e-08
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 394 KIKEKGFG-ENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYA 452
+K G G E P++G V VHY + + G +I A++
Sbjct: 9 IVKRVGHGEETPMIGDRVYVHYNGKLANGKKFDSSHDRNEPFVFSIGKGQ--VIKAWDIG 66
Query: 453 ILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
+ +M+KG E E +GA G P+IP+ A L FEV L++F
Sbjct: 67 VATMKKG------EICHLLCKPEYAYGATGSLPKIPSNATLFFEVELLDF 110
>d1kt1a3 d.26.1.1 (A:139-253) FKBP51, N-terminal domains {Monkey
(Saimiri boliviensis) [TaxId: 27679]}
Length = 115
Score = 49.7 bits (118), Expect = 4e-08
Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 13/111 (11%)
Query: 394 KIKEKGFG-ENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYA 452
+ K +G G NP GA VQ+H D + ++ E + + A
Sbjct: 13 RTKRRGEGYSNPNEGARVQIHLEGRCGGR--VFDCRDVAFTVGEGED---HDIPIGIDKA 67
Query: 453 ILSMQKGSLNLSGEKSDFFASYELCFGALGCPP-RIPAKADLLFEVHLINF 502
+ MQ+ E+ FG G P I A+L++EV L +F
Sbjct: 68 LEKMQRE------EQCILHLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSF 112
>d1q1ca2 d.26.1.1 (A:141-257) FKBP52, N-terminal domains {Human
(Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 49.4 bits (117), Expect = 5e-08
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 13/111 (11%)
Query: 394 KIKEKGFG-ENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYA 452
+I+ +G G P GA V+V Y + E + + L E A
Sbjct: 13 RIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELR-----FEIGEGENLDLPYGLERA 67
Query: 453 ILSMQKGSLNLSGEKSDFFASYELCFGALGCPP-RIPAKADLLFEVHLINF 502
I M+KG E S + FG++G +IP A+L +E+HL +F
Sbjct: 68 IQRMEKG------EHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSF 112
>d1u79a_ d.26.1.1 (A:) FKBP13 {Thale cress (Arabidopsis thaliana)
[TaxId: 3702]}
Length = 125
Score = 49.1 bits (116), Expect = 6e-08
Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Query: 394 KIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAI 453
K G+G V G ++ HY+ E + + + P F++G +I ++ I
Sbjct: 13 CDKVVGYGPEAVKGQLIKAHYVGKLENG--KVFDSSYNRGKPLTFRIGVGEVIKGWDQGI 70
Query: 454 LSMQKGSLNLSGEKSDFFASYELCFGALGCPPR-----IPAKADLLFEVHLI 500
L L+G K EL +G G + IP + LLF++ I
Sbjct: 71 LGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYI 122
>d2ppna1 d.26.1.1 (A:1-107) FK-506 binding protein (FKBP12), an
immunophilin {Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 47.9 bits (113), Expect = 1e-07
Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 9/110 (8%)
Query: 394 KIKEKGFG-ENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYA 452
+ G G P G VHY E + K F LG +I +E
Sbjct: 5 ETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFK--FMLGKQEVIRGWEEG 62
Query: 453 ILSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
+ M G +++ S + +GA G P IP A L+F+V L+
Sbjct: 63 VAQMSVG------QRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKL 106
>d1jvwa_ d.26.1.1 (A:) Macrophage infectivity potentiator protein
(MIP) {Trypanosoma cruzi [TaxId: 5693]}
Length = 160
Score = 47.1 bits (111), Expect = 6e-07
Identities = 25/127 (19%), Positives = 50/127 (39%), Gaps = 11/127 (8%)
Query: 394 KIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAI 453
+I P + +VHY + + + + +I + A+
Sbjct: 40 RIARGSGKRAPAIDDKCEVHYTGRLRDG----TVFDSSRERGKPTTFRPNEVIKGWTEAL 95
Query: 454 LSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINFSIDPQVVRSSA 513
M++G ++ F Y+L +G G IP + L F+V LI+ D R++
Sbjct: 96 QLMREG------DRWRLFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIK-DGGKGRTAE 148
Query: 514 DIESLLR 520
+++ +LR
Sbjct: 149 EVDEILR 155
>d1pbka_ d.26.1.1 (A:) FKBP25 {Human (Homo sapiens) [TaxId: 9606]}
Length = 116
Score = 45.6 bits (107), Expect = 9e-07
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 394 KIKEKGFG-ENPVLGAHVQVHYMYYAEANELPI-----DITYLRKSIPERFQLGSSGLIP 447
+ +KG P G V Y + + + + P F++G +I
Sbjct: 6 SVLKKGDKTNFPKKGDVVHCWYTGTLQDGTVFDTNIQTSAKKKKNAKPLSFKVGVGKVIR 65
Query: 448 AFEYAILSMQKGSLNLSGEKSDFFASYELCFGALGCP-PRIPAKADLLFEVHLINF 502
++ A+L+M KG EK+ E +G G P +IP A L FEV L++
Sbjct: 66 GWDEALLTMSKG------EKARLEIEPEWAYGKKGQPDAKIPPNAKLTFEVELVDI 115
>d1fd9a_ d.26.1.1 (A:) Macrophage infectivity potentiator protein
(MIP) {Legionella pneumophila [TaxId: 446]}
Length = 204
Score = 46.8 bits (110), Expect = 1e-06
Identities = 22/108 (20%), Positives = 37/108 (34%), Gaps = 10/108 (9%)
Query: 395 IKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAIL 454
+ G G P V V Y + + + P FQ+ +IP + A+
Sbjct: 104 VINSGNGVKPGKSDTVTVEYTGRLIDGT--VFDSTEKTGKPATFQVS--QVIPGWTEALQ 159
Query: 455 SMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
M G + + L +G I L+F++HLI+
Sbjct: 160 LMPAG------STWEIYVPSGLAYGPRSVGGPIGPNETLIFKIHLISV 201
>d1q6ha_ d.26.1.1 (A:) Peptidyl-prolyl cis-trans isomerase FkpA
{Escherichia coli [TaxId: 562]}
Length = 210
Score = 43.7 bits (102), Expect = 1e-05
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 11/109 (10%)
Query: 394 KIKEKGFGENPVLGAHVQVHYMYYAEANELPIDITYLRKSIPERFQLGSSGLIPAFEYAI 453
++ E G GE P V V+Y + + + P F+L G+IP + +
Sbjct: 112 QVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYT--RGEPLSFRLD--GVIPGWTEGL 167
Query: 454 LSMQKGSLNLSGEKSDFFASYELCFGALGCPPRIPAKADLLFEVHLINF 502
+++KG K EL +G G P IP + L+F+V L++
Sbjct: 168 KNIKKG------GKIKLVIPPELAYGKAGVPG-IPPNSTLVFDVELLDV 209
>d1nsca_ b.68.1.1 (A:) Influenza neuraminidase {Influenza B virus,
different strains [TaxId: 11520]}
Length = 390
Score = 32.9 bits (75), Expect = 0.079
Identities = 10/56 (17%), Positives = 18/56 (32%), Gaps = 17/56 (30%)
Query: 297 DGWMGLDIGPKSR---ELFK----------EPIARAKVIV----WNGPSGVFEFEN 335
W + R EL+ + +A + V+V S FE ++
Sbjct: 286 GRWYSRTMSKTERMGMELYVRYDGDPWTDSDALAHSGVMVSMKEPGWYSFGFEIKD 341
>d1rjta_ d.9.1.1 (A:) Small inducible cytokine b11 (CXCL11/I-TAC)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 73
Score = 26.3 bits (58), Expect = 2.2
Identities = 5/19 (26%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Query: 247 DPEGAKIVKKLVEKAEKNN 265
+P+ +K + +++K E+ N
Sbjct: 55 NPK-SKQARLIIKKVERKN 72
>d1smyc_ e.29.1.1 (C:) RNA-polymerase beta {Thermus thermophilus
[TaxId: 274]}
Length = 1119
Score = 27.8 bits (61), Expect = 4.3
Identities = 9/45 (20%), Positives = 17/45 (37%), Gaps = 9/45 (20%)
Query: 218 KVNEMIIGG------GMSYTF---LKELKGMNIGGSLYDPEGAKI 253
E II G + +F +KEL+ + + D + +
Sbjct: 1065 AAYEAIIKGEDVPEPSVPESFRVLVKELQALALDVQTLDEKDNPV 1109
>d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4
[TaxId: 9606]}
Length = 144
Score = 26.3 bits (58), Expect = 5.4
Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 14/85 (16%)
Query: 60 KNLKYSLKPVAEELKTLLKKDITFLDDCVGPKVEEACADPPAGSIILLENLRFYVEEEGK 119
L+ L PVAEE + L K++ +G +E+ + L Y E
Sbjct: 55 SELEEQLTPVAEETRARLSKELQAAQARLGADMED-----------VRGRLVQYRGEVQA 103
Query: 120 GVNAAGEKVKASAEDVKKFRESLRK 144
+ + E+++ + LRK
Sbjct: 104 MLGQSTEELR---VRLASHLRKLRK 125
>d2nx2a1 c.129.1.2 (A:1-177) Hypothetical protein YpsA {Bacillus
subtilis [TaxId: 1423]}
Length = 177
Score = 26.3 bits (58), Expect = 6.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 245 LYDPEGAKIVKKLVEKAEKNNVKLHFPVDFITAD 278
LYDPE K ++ AEK + +P+ FIT D
Sbjct: 136 LYDPEKEGSPKYMLGTAEKRREQDGYPIYFITMD 169
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.137 0.392
Gapped
Lambda K H
0.267 0.0488 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,961,793
Number of extensions: 95631
Number of successful extensions: 370
Number of sequences better than 10.0: 1
Number of HSP's gapped: 330
Number of HSP's successfully gapped: 27
Length of query: 528
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 439
Effective length of database: 1,185,626
Effective search space: 520489814
Effective search space used: 520489814
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.5 bits)