BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8375
(105 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1C0F|A Chain A, Crystal Structure Of Dictyostelium Caatp-Actin In Complex
With Gelsolin Segment 1
Length = 368
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N+V++GG F GI DR+ ++ LAP + ++ P
Sbjct: 266 GIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKIIAP 325
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F ++KEEY+E G ++ + +
Sbjct: 326 PERKYSVWIGGSILASLSTFQQMWISKEEYDESGPSIVHRK 366
>pdb|3CHW|A Chain A, Complex Of Dictyostelium Discoideum Actin With Profilin
And The Last Poly-Pro Of Human Vasp
pdb|3CIP|A Chain A, Complex Of Dictyostelium Discoideum Actin With Gelsolin
Length = 375
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N+V++GG F GI DR+ ++ LAP + ++ P
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKIIAP 332
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F ++KEEY+E G ++ + +
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKEEYDESGPSIVHRK 373
>pdb|3CI5|A Chain A, Complex Of Phosphorylated Dictyostelium Discoideum Actin
With Gelsolin
Length = 375
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N+V++GG F GI DR+ ++ LAP + ++ P
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKIIAP 332
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F ++KEEY+E G ++ + +
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKEEYDESGPSIVHRK 373
>pdb|1NLV|A Chain A, Crystal Structure Of Dictyostelium Discoideum Actin
Complexed With Ca Atp And Human Gelsolin Segment 1
pdb|1NM1|A Chain A, Crystal Structure Of D. Dicsoideum Actin Complexed With
Gelsolin Segment 1 And Mg Atp At 1.8 A Resolution
pdb|1NMD|A Chain A, Crystal Structure Of D. Discoideum Actin-Gelsolin Segment
1 Complex Crystallized In Presence Of Lithium Atp
Length = 375
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N+V++GG F GI DR+ ++ LAP + ++ P
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKIIAP 332
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F ++KEEY+E G ++ + +
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKEEYDESGPSIVHRK 373
>pdb|1YAG|A Chain A, Structure Of The Yeast Actin-human Gelsolin Segment 1
Complex
Length = 375
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 54/101 (53%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ + + I C ++ + LY NIV++GG F GI +R++ ++ LAP V ++ P
Sbjct: 273 GIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMFPGIAERMQKEITALAPSSMKVKIIAP 332
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F ++K+EY+E G ++ + +
Sbjct: 333 PERKYSVWIGGSILASLTTFQQMWISKQEYDESGPSIVHHK 373
>pdb|4EFH|A Chain A, Acanthamoeba Actin Complex With Spir Domain D
Length = 375
Score = 67.0 bits (162), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 54/101 (53%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N+V++GG F GI DR++ ++ LAP + ++ P
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMQKELTALAPSTMKIKIIAP 332
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F ++KEEY+E G ++ + +
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKEEYDESGPSIVHRK 373
>pdb|2BTF|A Chain A, The Structure Of Crystalline Profilin-Beta-Actin
pdb|1HLU|A Chain A, Structure Of Bovine Beta-Actin-Profilin Complex With Actin
Bound Atp Phosphates Solvent Accessible
Length = 375
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 273 GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F ++K+EY+E G ++ + +
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 373
>pdb|3U4L|A Chain A, Cryocooled Bovine Profilin:actin Crystal Structure To 2.4
A
Length = 375
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 273 GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F ++K+EY+E G ++ + +
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 373
>pdb|3BYH|A Chain A, Model Of Actin-Fimbrin Abd2 Complex
pdb|3LUE|A Chain A, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|B Chain B, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|C Chain C, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|D Chain D, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|E Chain E, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|F Chain F, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|G Chain G, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|H Chain H, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|I Chain I, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|J Chain J, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3J0S|A Chain A, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|B Chain B, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|C Chain C, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|D Chain D, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|E Chain E, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|F Chain F, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|G Chain G, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|H Chain H, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|I Chain I, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|J Chain J, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|K Chain K, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|L Chain L, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3UB5|A Chain A, Profilin:actin With A Wide Open Nucleotide Cleft
Length = 374
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 272 GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 331
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F ++K+EY+E G ++ + +
Sbjct: 332 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 372
>pdb|1EQY|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin
Domain 1
pdb|1ESV|A Chain A, Complex Between Latrunculin A:rabbit Muscle Alpha
Actin:human Gelsolin Domain 1
pdb|1MDU|B Chain B, Crystal Structure Of The Chicken Actin Trimer Complexed
With Human Gelsolin Segment 1 (Gs-1)
pdb|1MDU|E Chain E, Crystal Structure Of The Chicken Actin Trimer Complexed
With Human Gelsolin Segment 1 (Gs-1)
pdb|2PBD|A Chain A, Ternary Complex Of Profilin-Actin With The Poly-Pro-Gab
Domain Of Vasp
Length = 377
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 275 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 334
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F +TK+EY+E G ++ + +
Sbjct: 335 PERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRK 375
>pdb|3G37|O Chain O, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|P Chain P, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|Q Chain Q, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|R Chain R, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|S Chain S, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|T Chain T, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|U Chain U, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|V Chain V, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|W Chain W, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|X Chain X, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|Y Chain Y, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|Z Chain Z, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
Length = 376
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 274 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 333
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F +TK+EY+E G ++ + +
Sbjct: 334 PERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRK 374
>pdb|1QZ5|A Chain A, Structure Of Rabbit Actin In Complex With Kabiramide C
pdb|1QZ6|A Chain A, Structure Of Rabbit Actin In Complex With Jaspisamide A
pdb|1S22|A Chain A, Absolute Stereochemistry Of Ulapualide A
pdb|1Y64|A Chain A, Bni1p Formin Homology 2 Domain Complexed With Atp-actin
pdb|1YXQ|A Chain A, Crystal Structure Of Actin In Complex With Swinholide A
pdb|1YXQ|B Chain B, Crystal Structure Of Actin In Complex With Swinholide A
pdb|2A3Z|A Chain A, Ternary Complex Of The Wh2 Domain Of Wasp With Actin-Dnase
I
pdb|2A40|A Chain A, Ternary Complex Of The Wh2 Domain Of Wave With Actin-Dnase
I
pdb|2A40|D Chain D, Ternary Complex Of The Wh2 Domain Of Wave With Actin-Dnase
I
pdb|2A41|A Chain A, Ternary Complex Of The Wh2 Domain Of Wip With Actin-Dnase
I
pdb|2A42|A Chain A, Actin-Dnase I Complex
pdb|2ASO|A Chain A, Structure Of Rabbit Actin In Complex With Sphinxolide B
pdb|1WUA|A Chain A, The Structure Of Aplyronine A-Actin Complex
pdb|2FXU|A Chain A, X-Ray Structure Of Bistramide A- Actin Complex At 1.35 A
Resolution.
pdb|2D1K|A Chain A, Ternary Complex Of The Wh2 Domain Of Mim With Actin-Dnase
I
pdb|2HMP|A Chain A, Uncomplexed Actin Cleaved With Protease Ecp32
pdb|2HMP|B Chain B, Uncomplexed Actin Cleaved With Protease Ecp32
pdb|2Q0U|A Chain A, Structure Of Pectenotoxin-2 And Latrunculin B Bound To
Actin
pdb|1J6Z|A Chain A, Uncomplexed Actin
pdb|1LOT|B Chain B, Crystal Structure Of The Complex Of Actin With Vitamin
D-Binding Protein
pdb|1MA9|B Chain B, Crystal Structure Of The Complex Of Human Vitamin D
Binding Protein And Rabbit Muscle Actin
pdb|1NWK|A Chain A, Crystal Structure Of Monomeric Actin In The Atp State
pdb|2Q97|A Chain A, Complex Of Mammalian Actin With Toxofilin From Toxoplasma
Gondii
pdb|2PAV|A Chain A, Ternary Complex Of Profilin-Actin With The Last Poly-Pro
Of Human Vasp
pdb|2VCP|A Chain A, Crystal Structure Of N-wasp Vc Domain In Complex With
Skeletal Actin
pdb|2VCP|B Chain B, Crystal Structure Of N-wasp Vc Domain In Complex With
Skeletal Actin
pdb|2ZWH|A Chain A, Model For The F-Actin Structure
pdb|3HBT|A Chain A, The Structure Of Native G-Actin
pdb|3M3N|A Chain A, Structure Of A Longitudinal Actin Dimer Assembled By
Tandem W Domains
pdb|3M3N|B Chain B, Structure Of A Longitudinal Actin Dimer Assembled By
Tandem W Domains
pdb|3M1F|A Chain A, Crosslinked Complex Of Actin With First W Domain Of Vibrio
Parahaemolyticus Vopl
pdb|3MFP|A Chain A, Atomic Model Of F-Actin Based On A 6.6 Angstrom Resolution
Cryoem Map
pdb|4A7F|A Chain A, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|D Chain D, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|E Chain E, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|F Chain F, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|A Chain A, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|D Chain D, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|E Chain E, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|F Chain F, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|A Chain A, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|D Chain D, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|E Chain E, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|F Chain F, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7N|A Chain A, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|B Chain B, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|C Chain C, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|D Chain D, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|E Chain E, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4H03|B Chain B, Crystal Structure Of Nad+-ia-actin Complex
Length = 375
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 273 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F +TK+EY+E G ++ + +
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRK 373
>pdb|4B1V|A Chain A, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin
pdb|4B1V|B Chain B, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin
pdb|4B1Z|A Chain A, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|B Chain B, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|C Chain C, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|D Chain D, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|E Chain E, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|F Chain F, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
Length = 376
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 274 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 333
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F +TK+EY+E G ++ + +
Sbjct: 334 PERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRK 374
>pdb|1IJJ|A Chain A, The X-Ray Crystal Structure Of The Complex Between Rabbit
Skeletal Muscle Actin And Latrunculin A At 2.85 A
Resolution
pdb|1IJJ|B Chain B, The X-Ray Crystal Structure Of The Complex Between Rabbit
Skeletal Muscle Actin And Latrunculin A At 2.85 A
Resolution
pdb|1P8Z|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin
Residues Val26-Glu156
pdb|1SQK|A Chain A, Crystal Structure Of Ciboulot In Complex With Skeletal
Actin
pdb|1RGI|A Chain A, Crystal Structure Of Gelsolin Domains G1-G3 Bound To Actin
pdb|3CJB|A Chain A, Actin Dimer Cross-Linked By V. Cholerae Martx Toxin And
Complexed With Gelsolin-Segment 1
pdb|3CJC|A Chain A, Actin Dimer Cross-Linked By V. Cholerae Martx Toxin And
Complexed With Dnase I And Gelsolin-Segment 1
pdb|3B5U|A Chain A, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|B Chain B, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|C Chain C, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|D Chain D, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|E Chain E, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|F Chain F, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|G Chain G, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|H Chain H, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|I Chain I, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|J Chain J, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|K Chain K, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|L Chain L, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|M Chain M, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|N Chain N, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3DAW|A Chain A, Structure Of The Actin-Depolymerizing Factor Homology
Domain In Complex With Actin
pdb|2V51|B Chain B, Structure Of Mal-Rpel1 Complexed To Actin
pdb|2V51|D Chain D, Structure Of Mal-Rpel1 Complexed To Actin
pdb|2V52|B Chain B, Structure Of Mal-Rpel2 Complexed To G-Actin
pdb|2VYP|A Chain A, Rabbit-Muscle G-Actin In Complex With Myxobacterial
Rhizopodin
pdb|2VYP|B Chain B, Rabbit-Muscle G-Actin In Complex With Myxobacterial
Rhizopodin
pdb|3FFK|B Chain B, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To
Actin
pdb|3FFK|E Chain E, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To
Actin
pdb|2YJE|A Chain A, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJE|B Chain B, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJE|C Chain C, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|A Chain A, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|B Chain B, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|C Chain C, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|D Chain D, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|E Chain E, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|3TU5|A Chain A, Actin Complex With Gelsolin Segment 1 Fused To Cobl
Segment
pdb|4EAH|D Chain D, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
pdb|4EAH|H Chain H, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
pdb|4EAH|G Chain G, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
pdb|4EAH|F Chain F, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
Length = 377
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 275 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 334
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F +TK+EY+E G ++ + +
Sbjct: 335 PERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRK 375
>pdb|3MN5|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
Length = 359
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 257 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 316
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F +TK+EY+E G ++ + +
Sbjct: 317 PERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRK 357
>pdb|2HF3|A Chain A, Crystal Structure Of Monomeric Actin In The Adp Bound
State
pdb|2HF4|A Chain A, Crystal Structure Of Monomeric Actin In Its Atp-Bound
State
pdb|3MN7|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN9|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MMV|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN6|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN6|F Chain F, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN6|K Chain K, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
Length = 374
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 272 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 331
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F ++K+EY+E G ++ + +
Sbjct: 332 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 372
>pdb|3EKS|A Chain A, Crystal Structure Of Monomeric Actin Bound To Cytochalasin
D
pdb|3EKU|A Chain A, Crystal Structure Of Monomeric Actin Bound To Cytochalasin
D
pdb|3EL2|A Chain A, Crystal Structure Of Monomeric Actin Bound To Ca-Atp
Length = 375
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F ++K+EY+E G ++ + +
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 373
>pdb|1C0G|A Chain A, Crystal Structure Of 1:1 Complex Between Gelsolin Segment
1 And A DictyosteliumTETRAHYMENA CHIMERA ACTIN (MUTANT
228: Q228kT229AA230YE360H)
Length = 375
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N+V++GG F GI DR+ ++ LAP + ++ P
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKIIAP 332
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F ++K EY+E G ++ + +
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKHEYDESGPSIVHRK 373
>pdb|1DEJ|A Chain A, Crystal Structure Of A DictyosteliumTETRAHYMENA CHIMERA
Actin (Mutant 646: Q228kT229AA230YA231KS232EE360H) IN
Complex With Human Gelsolin Segment 1
Length = 375
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N+V++GG F GI DR+ ++ LAP + ++ P
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKIIAP 332
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F ++K EY+E G ++ + +
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKHEYDESGPSIVHRK 373
>pdb|3A5L|C Chain C, Crystal Structure Of A Dictyostelium P109a Mg2+-Actin In
Complex With Human Gelsolin Segment 1
pdb|3A5N|C Chain C, Crystal Structure Of A Dictyostelium P109a Ca2+-Actin In
Complex With Human Gelsolin Segment 1
Length = 375
Score = 66.2 bits (160), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N+V++GG F GI DR+ ++ LAP + ++ P
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKIIAP 332
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F ++KEEY+E G ++ + +
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKEEYDESGPSIVHRK 373
>pdb|1K8K|A Chain A, Crystal Structure Of Arp23 COMPLEX
pdb|1TYQ|A Chain A, Crystal Structure Of Arp23 COMPLEX WITH BOUND ATP AND
Calcium
pdb|1U2V|A Chain A, Crystal Structure Of Arp23 COMPLEX WITH BOUND ADP AND
Calcium
pdb|2P9I|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp And Crosslinked With Gluteraldehyde
pdb|2P9K|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Atp And Crosslinked With Glutaraldehyde
pdb|2P9L|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX
pdb|2P9N|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9P|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9S|A Chain A, Structure Of Bovine Arp23 COMPLEX CO-Crystallized With
AtpMG2+
pdb|2P9U|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Amp-Pnp And Calcium
pdb|3DXK|A Chain A, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0944636
pdb|3DXM|A Chain A, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0993548
pdb|3RSE|A Chain A, Structural And Biochemical Characterization Of Two Binding
Sites For Nucleation Promoting Factor Wasp-Vca On Arp23
COMPLEX
pdb|3UKR|A Chain A, Crystal Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-666
pdb|3UKU|A Chain A, Structure Of Arp2/3 Complex With Bound Inhibitor Ck-869
pdb|3ULE|A Chain A, Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-869 And Atp
Length = 418
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 16/113 (14%)
Query: 3 VSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRT-------------- 48
+SE + +VI++CP++ + LY+NIV++GG F R++ D++
Sbjct: 296 ISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSG 355
Query: 49 --LAPDEFDVNVVLPSNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALC 99
L P DV V+ W GG +++ PEFY TK++YEE G ++C
Sbjct: 356 GRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSIC 408
>pdb|3A5M|C Chain C, Crystal Structure Of A Dictyostelium P109i Mg2+-Actin In
Complex With Human Gelsolin Segment 1
pdb|3A5O|C Chain C, Crystal Structure Of A Dictyostelium P109i Ca2+-Actin In
Complex With Human Gelsolin Segment 1
Length = 375
Score = 66.2 bits (160), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N+V++GG F GI DR+ ++ LAP + ++ P
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKIIAP 332
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F ++KEEY+E G ++ + +
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKEEYDESGPSIVHRK 373
>pdb|1D4X|A Chain A, Crystal Structure Of Caenorhabditis Elegans Mg-Atp Actin
Complexed With Human Gelsolin Segment 1 At 1.75 A
Resolution
Length = 375
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 273 GIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F ++K+EY+E G ++ + +
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 373
>pdb|1YVN|A Chain A, The Yeast Actin Val 159 Asn Mutant Complex With Human
Gelsolin Segment 1
Length = 375
Score = 65.9 bits (159), Expect = 6e-12, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 54/101 (53%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ + + I C ++ + LY NIV++GG F GI +R++ ++ LAP V ++ P
Sbjct: 273 GIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMFPGIAERMQKEITALAPSSMKVKIIAP 332
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F ++K+EY+E G ++ + +
Sbjct: 333 PERKYSVWIGGSILASLTTFQQMWISKQEYDESGPSIVHHK 373
>pdb|3W3D|A Chain A, Crystal Structure Of Smooth Muscle G Actin Dnase I Complex
Length = 374
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 272 GIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 331
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F ++K+EY+E G ++ + +
Sbjct: 332 PERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHRK 372
>pdb|3B63|A Chain A, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|G Chain G, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 65.1 bits (157), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 50/94 (53%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ + + I C ++ + LY NIV++GG F GI +R++ ++ LAP V ++ P
Sbjct: 268 GIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMFPGIAERMQKEITALAPSSMKVKIIAP 327
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEG 95
W GG +++ F ++K+EY+E G
Sbjct: 328 PERKYSVWIGGSILASLTTFQQMWISKQEYDESG 361
>pdb|3B63|C Chain C, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|I Chain I, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 50/94 (53%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ + + I C ++ + LY NIV++GG F GI +R++ ++ LAP V ++ P
Sbjct: 268 GIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMFPGIAERMQKEITALAPSSMKVKIIAP 327
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEG 95
W GG +++ F ++K+EY+E G
Sbjct: 328 PERKYSVWIGGSILASLTTFQQMWISKQEYDESG 361
>pdb|1T44|A Chain A, Structural Basis Of Actin Sequestration By Thymosin-B4:
Implications For Arp23 ACTIVATION
Length = 370
Score = 64.3 bits (155), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 268 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 327
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F +TK+EY+E G ++ + +
Sbjct: 328 PERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRK 368
>pdb|1LCU|A Chain A, Polylysine Induces An Antiparallel Actin Dimer That
Nucleates Filament Assembly: Crystal Structure At 3.5 A
Resolution
pdb|1LCU|B Chain B, Polylysine Induces An Antiparallel Actin Dimer That
Nucleates Filament Assembly: Crystal Structure At 3.5 A
Resolution
Length = 371
Score = 64.3 bits (155), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 269 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 328
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F +TK+EY+E G ++ + +
Sbjct: 329 PERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRK 369
>pdb|2GWJ|A Chain A, Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form
pdb|2GWK|A Chain A, Spvb Adp-Ribosylated Actin: Orthorhombic Crystal Form
pdb|2GWK|B Chain B, Spvb Adp-Ribosylated Actin: Orthorhombic Crystal Form
Length = 371
Score = 64.3 bits (155), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 269 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 328
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F +TK+EY+E G ++ + +
Sbjct: 329 PERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRK 369
>pdb|2OAN|A Chain A, Structure Of Oxidized Beta-Actin
pdb|2OAN|B Chain B, Structure Of Oxidized Beta-Actin
pdb|2OAN|C Chain C, Structure Of Oxidized Beta-Actin
pdb|2OAN|D Chain D, Structure Of Oxidized Beta-Actin
Length = 375
Score = 64.3 bits (155), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 273 GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F ++K+EY+E G ++ + +
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 373
>pdb|1KXP|A Chain A, Crystal Structure Of Human Vitamin D-binding Protein In
Complex With Skeletal Actin
pdb|1M8Q|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1H1V|A Chain A, Gelsolin G4-G6ACTIN COMPLEX
pdb|1RDW|X Chain X, Actin Crystal Dynamics: Structural Implications For
F-Actin Nucleation, Polymerization And Branching
Mediated By The Anti-Parallel Dimer
pdb|1RFQ|A Chain A, Actin Crystal Dynamics: Structural Implications For
F-Actin Nucleation, Polymerization And Branching
Mediated By The Anti-Parallel Dimer
pdb|1RFQ|B Chain B, Actin Crystal Dynamics: Structural Implications For
F-Actin Nucleation, Polymerization And Branching
Mediated By The Anti-Parallel Dimer
pdb|2A5X|A Chain A, Crystal Structure Of A Cross-Linked Actin Dimer
pdb|2ASM|A Chain A, Structure Of Rabbit Actin In Complex With Reidispongiolide
A
pdb|2ASP|A Chain A, Structure Of Rabbit Actin In Complex With Reidispongiolide
C
pdb|2FF3|B Chain B, Crystal Structure Of Gelsolin Domain 1:n-Wasp V2 Motif
Hybrid In Complex With Actin
pdb|2FF6|A Chain A, Crystal Structure Of Gelsolin Domain 1:ciboulot Domain 2
Hybrid In Complex With Actin
pdb|2Q1N|A Chain A, Actin Dimer Cross-Linked Between Residues 41 And 374
pdb|2Q1N|B Chain B, Actin Dimer Cross-Linked Between Residues 41 And 374
pdb|2Q31|A Chain A, Actin Dimer Cross-linked Between Residues 41 And 374 And
Proteolytically Cleaved By Subtilisin Between Residues
47 And 48.
pdb|2Q31|B Chain B, Actin Dimer Cross-linked Between Residues 41 And 374 And
Proteolytically Cleaved By Subtilisin Between Residues
47 And 48.
pdb|2Q36|A Chain A, Actin Dimer Cross-Linked Between Residues 191 And 374 And
Complexed With Kabiramide C
pdb|2Q0R|A Chain A, Structure Of Pectenotoxin-2 Bound To Actin
pdb|3BUZ|B Chain B, Crystal Structure Of Ia-Btad-Actin Complex
pdb|2Y83|O Chain O, Actin Filament Pointed End
pdb|2Y83|P Chain P, Actin Filament Pointed End
pdb|2Y83|Q Chain Q, Actin Filament Pointed End
pdb|2Y83|R Chain R, Actin Filament Pointed End
pdb|2Y83|S Chain S, Actin Filament Pointed End
pdb|2Y83|T Chain T, Actin Filament Pointed End
pdb|3TPQ|A Chain A, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|B Chain B, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|C Chain C, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|D Chain D, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|E Chain E, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3SJH|A Chain A, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-29) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 18-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp- Latrunculin A
pdb|3U8X|A Chain A, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-29) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 18-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U8X|C Chain C, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-29) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 18-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U9D|A Chain A, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-24) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 13-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U9D|C Chain C, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-24) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 13-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U9Z|A Chain A, Crystal Structure Between Actin And A Protein Construct
Containing The First Beta-Thymosin Domain Of Drosophila
Ciboulot (Residues 2-58) With The Three Mutations
N26dQ27KD28S
pdb|3UE5|A Chain A, Ecp-Cleaved Actin In Complex With Spir Domain D
pdb|4GY2|B Chain B, Crystal Structure Of Apo-ia-actin Complex
pdb|4H0T|B Chain B, Crystal Structure Of Ia-adpr-actin Complex
pdb|4H0V|B Chain B, Crystal Structure Of Nad+-ia(e378s)-actin Complex
pdb|4H0X|B Chain B, Crystal Structure Of Nad+-ia(e380a)-actin Complex
pdb|4H0Y|B Chain B, Crystal Structure Of Nad+-ia(e380s)-actin Complex
Length = 375
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 53/101 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 273 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
W GG +++ F +TK+EY+E G ++ + +
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRK 373
>pdb|3M6G|A Chain A, Crystal Structure Of Actin In Complex With Lobophorolide
pdb|3M6G|B Chain B, Crystal Structure Of Actin In Complex With Lobophorolide
Length = 371
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 52/99 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 273 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCY 100
W GG +++ F +TK+EY+E G ++ +
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVH 371
>pdb|2W49|D Chain D, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|E Chain E, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|F Chain F, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|G Chain G, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|H Chain H, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|I Chain I, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|J Chain J, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|K Chain K, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|L Chain L, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|N Chain N, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|O Chain O, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|P Chain P, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|Q Chain Q, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|R Chain R, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|S Chain S, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|D Chain D, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|E Chain E, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|F Chain F, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|G Chain G, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|H Chain H, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|I Chain I, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|J Chain J, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|K Chain K, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|L Chain L, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|N Chain N, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|O Chain O, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|P Chain P, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|Q Chain Q, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|R Chain R, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|S Chain S, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 372
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 52/99 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 273 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCY 100
W GG +++ F +TK+EY+E G ++ +
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVH 371
>pdb|1ATN|A Chain A, Atomic Structure Of The Actin:dnase I Complex
Length = 373
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 52/99 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 274 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 333
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCY 100
W GG +++ F +TK+EY+E G ++ +
Sbjct: 334 PERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVH 372
>pdb|3B63|E Chain E, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|H Chain H, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|J Chain J, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|K Chain K, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|N Chain N, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 49/94 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 268 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 327
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEG 95
W GG +++ F +TK+EY+E G
Sbjct: 328 PERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 361
>pdb|3B63|L Chain L, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|M Chain M, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 63.5 bits (153), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 268 GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 327
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEG 95
W GG +++ F ++K+EY+E G
Sbjct: 328 PERKYSVWIGGSILASLSTFQQMWISKQEYDESG 361
>pdb|3B63|B Chain B, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 364
Score = 63.2 bits (152), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 49/94 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 267 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 326
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEG 95
W GG +++ F +TK+EY+E G
Sbjct: 327 PERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 360
>pdb|3DWL|A Chain A, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking
The Arp2 Subunit
pdb|3DWL|B Chain B, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking
The Arp2 Subunit
Length = 427
Score = 63.2 bits (152), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 15/115 (13%)
Query: 5 ECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEF---------- 54
E + +V++S P++ + LY+NIV++GG F +R++ D++ + +
Sbjct: 309 ELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAK 368
Query: 55 ----DVNVVLPSNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYERFDI 105
DVNV+ W GG L++ PEF S+ TK +YEE G ++ R+ I
Sbjct: 369 SGGVDVNVISHKRQRNAVWFGGSLLAQTPEFGSYCHTKADYEEYGASIA-RRYQI 422
>pdb|3B63|D Chain D, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 357
Score = 61.2 bits (147), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 48/92 (52%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 266 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 325
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEYEE 93
W GG +++ F +TK+EY+E
Sbjct: 326 PERKYSVWIGGSILASLSTFQQMWITKQEYDE 357
>pdb|3B63|F Chain F, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 357
Score = 58.9 bits (141), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 46/90 (51%)
Query: 2 GVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEFDVNVVLP 61
G+ E + I C ++ + LY N V++GG + GI DR++ ++ LAP + ++ P
Sbjct: 268 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 327
Query: 62 SNPMTYAWEGGKLMSLDPEFYSFVVTKEEY 91
W GG +++ F +TK+EY
Sbjct: 328 PERKYSVWIGGSILASLSTFQQMWITKQEY 357
>pdb|3QB0|A Chain A, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
pdb|3QB0|B Chain B, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
pdb|3QB0|C Chain C, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
pdb|3QB0|D Chain D, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
Length = 498
Score = 45.4 bits (106), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 1 MGVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPD-EFDVNVV 59
+G+++ + I S ++ + L N+V+TGG G+ DR+ +++ + P +F +
Sbjct: 392 IGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILPSLKFRILTT 451
Query: 60 LPSNPMTY-AWEGGKLMSLDPEFYSFVVTKEEYEEEGLA-LCYERF 103
+ Y +W GG +++ F+ V K+EYEE G+ L +RF
Sbjct: 452 GHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGVERLLNDRF 497
>pdb|2P9K|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Atp And Crosslinked With Glutaraldehyde
Length = 394
Score = 43.1 bits (100), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 1 MGVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTL----------- 49
+GV+E + + I++ ++ + Y++IV++GG + G+ R+E +++ L
Sbjct: 276 VGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVE 335
Query: 50 APDEFDVNVVLPSNPMTYAWEGGKLMS-LDPEFYSFVVTKEEYEEEGL 96
+F + + P + GG +++ + + +F +T++EY+E+G+
Sbjct: 336 KLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGV 383
>pdb|1K8K|B Chain B, Crystal Structure Of Arp23 COMPLEX
pdb|1TYQ|B Chain B, Crystal Structure Of Arp23 COMPLEX WITH BOUND ATP AND
Calcium
pdb|1U2V|B Chain B, Crystal Structure Of Arp23 COMPLEX WITH BOUND ADP AND
Calcium
pdb|2P9I|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp And Crosslinked With Gluteraldehyde
pdb|2P9L|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX
pdb|2P9N|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9P|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9S|B Chain B, Structure Of Bovine Arp23 COMPLEX CO-Crystallized With
AtpMG2+
pdb|2P9U|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Amp-Pnp And Calcium
pdb|3DXK|B Chain B, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0944636
pdb|3DXM|B Chain B, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0993548
pdb|3RSE|B Chain B, Structural And Biochemical Characterization Of Two Binding
Sites For Nucleation Promoting Factor Wasp-Vca On Arp23
COMPLEX
pdb|3UKR|B Chain B, Crystal Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-666
pdb|3UKU|B Chain B, Structure Of Arp2/3 Complex With Bound Inhibitor Ck-869
pdb|3ULE|B Chain B, Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-869 And Atp
Length = 394
Score = 43.1 bits (100), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 1 MGVSECIVDVIRSCPMEAQPHLYENIVITGGCCGFAGIRDRVESDVRTL----------- 49
+GV+E + + I++ ++ + Y++IV++GG + G+ R+E +++ L
Sbjct: 276 VGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVE 335
Query: 50 APDEFDVNVVLPSNPMTYAWEGGKLMS-LDPEFYSFVVTKEEYEEEGL 96
+F + + P + GG +++ + + +F +T++EY+E+G+
Sbjct: 336 KLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGV 383
>pdb|4FO0|A Chain A, Human Actin-Related Protein Arp8 In Its Atp-Bound State
Length = 593
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 1 MGVSECIVDVIRSCPME-AQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPDEF----- 54
+G+ + I+ I C + + +Y +I++ GG F ++ ++ + P F
Sbjct: 478 LGLDKAILHSIDCCSSDDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIE 537
Query: 55 DVNVVLPS---NPMTYAWEGGKLMSLDPEFYSFVVTKEEYEEEGLALCYER 102
+V+V+ +P AW+GG +++ + + E++ G+ + ER
Sbjct: 538 NVDVITRPKDMDPRLIAWKGGAVLACLDTTQELWIYQREWQRFGVRMLRER 588
>pdb|3OG2|A Chain A, Native Crystal Structure Of Trichoderma Reesei
Beta-Galactosidase
pdb|3OGR|A Chain A, Complex Structure Of Beta-Galactosidase From Trichoderma
Reesei With Galactose
pdb|3OGS|A Chain A, Complex Structure Of Beta-Galactosidase From Trichoderma
Reesei With Iptg
pdb|3OGV|A Chain A, Complex Structure Of Beta-Galactosidase From Trichoderma
Reesei With Petg
Length = 1003
Score = 30.0 bits (66), Expect = 0.35, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 18 AQPHLYENIVITGGCCGFAGIRDRVESDVRTLAPD 52
A+P Y N ++GG GF G RV+ +RT APD
Sbjct: 113 ARPGPYINAEVSGG--GFPGWLQRVKGKLRTDAPD 145
>pdb|1CJK|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Adenosine
5'-(Alpha Thio)-Triphosphate (Rp), Mg, And Mn
pdb|1CJT|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp, Mn, And Mg
pdb|1CJU|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp And Mg
pdb|1CJV|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp, Mg, And Zn
pdb|1TL7|C Chain C, Complex Of Gs- With The Catalytic Domains Of Mammalian
Adenylyl Cyclase: Complex With 2'(3')-O-(N-
Methylanthraniloyl)-Guanosine 5'-Triphosphate And Mn
Length = 402
Score = 27.3 bits (59), Expect = 2.2, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Query: 79 PEFYSFVVTKEEYEEEGLALCYER 102
PEFY K +E+EG+ CYER
Sbjct: 144 PEFYEH--AKALWEDEGVRACYER 165
>pdb|1CUL|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
2',5'-Dideoxy-Adenosine 3'- Triphosphate And Mg
Length = 380
Score = 27.3 bits (59), Expect = 2.2, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Query: 79 PEFYSFVVTKEEYEEEGLALCYER 102
PEFY K +E+EG+ CYER
Sbjct: 130 PEFYEH--AKALWEDEGVRACYER 151
>pdb|3SN6|A Chain A, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs
Protein Complex
Length = 380
Score = 27.3 bits (59), Expect = 2.2, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Query: 79 PEFYSFVVTKEEYEEEGLALCYER 102
PEFY K +E+EG+ CYER
Sbjct: 130 PEFYEH--AKALWEDEGVRACYER 151
>pdb|1AZS|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase
pdb|1AZT|A Chain A, Gs-Alpha Complexed With Gtp-Gamma-S
pdb|1AZT|B Chain B, Gs-Alpha Complexed With Gtp-Gamma-S
pdb|3C14|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Pyrophosphate
And Ca
pdb|3C15|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Pyrophosphate
And Mg
pdb|3C16|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Adenosine-5'-Triphosphate And Ca
Length = 402
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Query: 79 PEFYSFVVTKEEYEEEGLALCYER 102
PEFY K +E+EG+ CYER
Sbjct: 144 PEFYEH--AKALWEDEGVRACYER 165
>pdb|1CS4|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
2'-Deoxy-Adenosine 3'- Monophosphate, Pyrophosphate And
Mg
pdb|1U0H|C Chain C, Structural Basis For The Inhibition Of Mammalian Adenylyl
Cyclase By Mant-gtp
pdb|2GVD|C Chain C, Complex Of Gs- With The Catalytic Domains Of Mammalian
Adenylyl Cyclase: Complex With Tnp-Atp And Mn
pdb|2GVZ|C Chain C, Crystal Structure Of Complex Of Gs- With The Catalytic
Domains Of Mammalian Adenylyl Cyclase: Complex With
Mant- Atp And Mn
pdb|3G82|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Mant-Itp And Mn
pdb|3MAA|C Chain C, Complex Of Gs-alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Adenosine
5-o-(l-thiophosphate) And Low Ca Concentration
Length = 394
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Query: 79 PEFYSFVVTKEEYEEEGLALCYER 102
PEFY K +E+EG+ CYER
Sbjct: 144 PEFYEH--AKALWEDEGVRACYER 165
>pdb|2ZG2|A Chain A, Crystal Structure Of Two N-Terminal Domains Of Native
Siglec-5
Length = 216
Score = 26.6 bits (57), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 64 PMTYAWEGGKLMSLDPE 80
P+T++W G L LDPE
Sbjct: 157 PLTFSWTGNALSPLDPE 173
>pdb|2ZG1|A Chain A, Crystal Structure Of Two N-Terminal Domains Of Siglec-5 In
Complex With 6'-Sialyllactose
pdb|2ZG3|A Chain A, Crystal Structure Of Two N-terminal Domains Of Native
Siglec-5 In Complex With 3'-sialyllactose
Length = 214
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 64 PMTYAWEGGKLMSLDPE 80
P+T++W G L LDPE
Sbjct: 156 PLTFSWTGNALSPLDPE 172
>pdb|2QYG|A Chain A, Crystal Structure Of A Rubisco-Like Protein Rlp2 From
Rhodopseudomonas Palustris
pdb|2QYG|B Chain B, Crystal Structure Of A Rubisco-Like Protein Rlp2 From
Rhodopseudomonas Palustris
pdb|2QYG|C Chain C, Crystal Structure Of A Rubisco-Like Protein Rlp2 From
Rhodopseudomonas Palustris
pdb|2QYG|D Chain D, Crystal Structure Of A Rubisco-Like Protein Rlp2 From
Rhodopseudomonas Palustris
Length = 452
Score = 26.2 bits (56), Expect = 5.0, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 34 GFAGIRDRVESDVRTLAPDEFDVNVVLPSNPMT----YAWEGGKLMSLDPEFYSFV 85
G AG+R+R+++ R + N+ LP P +W GG ++ D E + V
Sbjct: 171 GIAGVRERLQAFDRPIFFGVIKPNIGLPPQPFAELGYQSWTGGLDIAKDDEMLADV 226
>pdb|3JZB|A Chain A, Crystal Structure Of Tr-Alfa Bound To The Selective
Thyromimetic Triac
pdb|3ILZ|A Chain A, Structure Of Tr-Alfa Bound To Selective Thyromimetic Gc-1
In Space Group
Length = 267
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 7 IVDVIRSCPMEAQPHLYENIVITGGCCG-----FAGIRDRVESDVRTLA 50
+VD + PM ++ + I++ GCC A +R ESD TL+
Sbjct: 86 VVDFAKKLPMFSELPXEDQIILLKGCCMEIMSLRAAVRYDPESDTLTLS 134
>pdb|3HZF|A Chain A, Structure Of Tr-alfa Bound To Selective Thyromimetic Gc-1
In C2 Space Group
Length = 269
Score = 26.2 bits (56), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 7 IVDVIRSCPMEAQPHLYENIVITGGCCG-----FAGIRDRVESDVRTLA 50
+VD + PM ++ + I++ GCC A +R ESD TL+
Sbjct: 88 VVDFAKKLPMFSELPXEDQIILLKGCCMEIMSLRAAVRYDPESDTLTLS 136
>pdb|2H79|A Chain A, Crystal Structure Of Human Tr Alpha Bound T3 In
Orthorhombic Space Group
Length = 269
Score = 25.8 bits (55), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 7 IVDVIRSCPMEAQPHLYENIVITGGCCG-----FAGIRDRVESDVRTLA 50
+VD + PM ++ + I++ GCC A +R ESD TL+
Sbjct: 88 VVDFAKKLPMFSELPXEDQIILLKGCCMEIMSLRAAVRYDPESDTLTLS 136
>pdb|3MR6|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex With A
Cpd 2bp Upstream Of The Active Site (Tt4)
pdb|3TQ1|A Chain A, Human Dna Polymerase Eta In Binary Complex With Dna
pdb|4EEY|A Chain A, Crystal Structure Of Human Dna Polymerase Eta In Ternary
Complex With A Cisplatin Dna Adduct
Length = 435
Score = 25.8 bits (55), Expect = 6.3, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 20/32 (62%)
Query: 68 AWEGGKLMSLDPEFYSFVVTKEEYEEEGLALC 99
+W+GG ++++ E +F VT+ + ++ LC
Sbjct: 44 SWKGGGIIAVSYEARAFGVTRSMWADDAKKLC 75
>pdb|3MR2|A Chain A, Human Dna Polymerase Eta In Complex With Normal Dna And
Incoming Nucleotide (Nrm)
pdb|3MR3|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex With The
3't Of A Cpd In The Active Site (Tt1)
pdb|3MR5|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex With A
Cpd 1bp Upstream Of The Active Site (Tt3)
pdb|3SI8|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex With The
5't Of A Cpd In The Active Site (Tt2)
pdb|4DL2|A Chain A, Human Dna Polymerase Eta Inserting Dcmpnpp Opposite Cg
Template (Gg0a)
pdb|4DL3|A Chain A, Human Dna Polymerase Eta Inserting Dcmpnpp Opposite Gg
Template (Gg0b).
pdb|4DL4|A Chain A, Human Dna Polymerase Eta Inserting Dcmpnpp Opposite The
3'g Of Cisplatin Crosslinked Gs (Pt-Gg1).
pdb|4DL5|A Chain A, Human Dna Polymerase Eta Inserting Dcmpnpp Opposite The
5'g Of Cisplatin Crosslinked Gs (Pt-Gg2).
pdb|4DL6|A Chain A, Human Dna Polymerase Eta Extending Primer Immediately
After Cisplatin Crosslink (Pt-Gg3).
pdb|4DL7|A Chain A, Human Dna Polymerase Eta Fails To Extend Primer 2
Nucleotide After Cisplatin Crosslink (Pt-Gg4).
pdb|4ECQ|A Chain A, Human Dna Polymerase Eta- Dna Ternary Complex: At
Crystal At Ph6.8(K+ Mes) With 1 Ca2+ Ion
pdb|4ECR|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 40 Sec
pdb|4ECS|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 80 Sec
pdb|4ECT|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 140 Sec
pdb|4ECU|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 200 Sec
pdb|4ECV|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 230 Sec
pdb|4ECW|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 250 Sec
pdb|4ECX|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 300 Sec
pdb|4ECY|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: At
Crystal At Ph 6.0 (Na+ Mes) With 1 Ca2+ Ion
pdb|4ECZ|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: At
Crystal At Ph 6.5 (Na+ Mes) With 1 Ca2+ Ion
pdb|4ED0|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: At
Crystal At Ph 6.8 (Na+ Mes) With 1 Ca2+ Ion
pdb|4ED1|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: At
Crystal At Ph 7.0 (Na+ Mes) With 1 Ca2+ Ion
pdb|4ED2|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: At
Crystal At Ph 7.2 (Na+ Hepes) With 1 Ca2+ Ion
pdb|4ED3|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: At
Crystal At Ph 7.5 (Na+ Hepes) With 1 Ca2+ Ion
pdb|4ED6|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 6.7 For 15 Hr, Sideway
Translocation
pdb|4ED7|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Tg
Crystal At Ph 7.0 (K+ Mes) With 1 Ca2+ Ion
pdb|4ED8|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The Tg Crystal At Ph 7.0, Normal Translocation
Length = 435
Score = 25.8 bits (55), Expect = 6.3, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 20/32 (62%)
Query: 68 AWEGGKLMSLDPEFYSFVVTKEEYEEEGLALC 99
+W+GG ++++ E +F VT+ + ++ LC
Sbjct: 44 SWKGGGIIAVSYEARAFGVTRSMWADDAKKLC 75
>pdb|1NAV|A Chain A, Thyroid Receptor Alpha In Complex With An Agonist
Selective For Thyroid Receptor Beta1
Length = 263
Score = 25.4 bits (54), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 7 IVDVIRSCPMEAQPHLYENIVITGGCCG-----FAGIRDRVESDVRTLA 50
+VD + PM ++ + I++ GCC A +R ESD TL+
Sbjct: 84 VVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESDTLTLS 132
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.140 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,410,932
Number of Sequences: 62578
Number of extensions: 132412
Number of successful extensions: 353
Number of sequences better than 100.0: 62
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 299
Number of HSP's gapped (non-prelim): 62
length of query: 105
length of database: 14,973,337
effective HSP length: 70
effective length of query: 35
effective length of database: 10,592,877
effective search space: 370750695
effective search space used: 370750695
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)