Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>psy8376
MDDYKLEVRCVIKQQKEEPQWLLHQPKVTMLISSKKDEELPSEINNKYLEFKKDNKDKIL
CYTDGSKTNTFTGGAYLLNETVEQFQLNQIASIYTAELMAIDLCLNSILMYIQNNFCFKD
FVICSDSKSSLQALKFNLNDSILISKILLKIKEISSFGSQVSFLWIPSHVGIRENEMVDR
AARNAVNARLTNQYTSSDYKAHFKHIQFKRWEEIWRQNAVLGRQLRQIKTDVRKWKSSNR
NIRQEEVVLCRLRIGHCLATHKHLLERKDPPACEFCGQTPVYLNHWLTECHALGNLRRQH
QRSILQDNVETIDRCMKFLYHTKLFAKI

High Scoring Gene Products

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy8376
        (328 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

ASPGD|ASPL0000075333 - symbol:AN10625 species:162425 "Eme...   153  3.5e-08   1


>ASPGD|ASPL0000075333 [details] [associations]
            symbol:AN10625 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0004523 "ribonuclease H activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR002156 InterPro:IPR012337 Pfam:PF00075 PROSITE:PS50879
            GO:GO:0003676 SUPFAM:SSF53098 EMBL:BN001303 GO:GO:0004523
            EnsemblFungi:CADANIAT00005305 Uniprot:C8V7Z8
        Length = 486

 Score = 153 (58.9 bits), Expect = 3.5e-08, P = 3.5e-08
 Identities = 67/259 (25%), Positives = 107/259 (41%)

Query:    59 ILCYTDGSKTNTFTGGA-----YLLNETVEQFQLNQIASIYTAELMAIDLCLNSILMYIQ 113
             I  YTDGS  N   G A     YL++ +    Q ++ +++Y AEL  I L L  IL   Q
Sbjct:   183 IALYTDGSGINGRVGAAAICPKYLISRSSYMGQQSE-STVYVAELQGILLALVIIL---Q 238

Query:   114 NNFCFKDFVICSDSKSSLQALKF--NLNDXXXXXXXXXXXXXXXXFGSQVSFLWIPSHVG 171
                  +  VI +D++++LQAL+   + +                  G  V F WIP+H G
Sbjct:   239 RQM--QHAVIFTDNQATLQALRNPGSQSGQYILEAIIMALNKGRKAGLNVHFRWIPAHRG 296

Query:   172 IRENEMVDXXXXXXXXXXLTNQYTS-----SDYKAHFKHIQFKRWEEIWRQNAVLGRQLR 226
             +  NE  D              +       S  K     +   RWE  W+ +   GR+L 
Sbjct:   297 VEGNEQADRRAKEATGWRRIRGHRGRMTIRSAVKRRAHEVVNARWENDWK-SCHHGRELY 355

Query:   227 QIK-TDVRKWKSSNRNI-RQEEVVLCRLRIGHCLATHKHLLERKDPPA----CEFCGQTP 280
             ++  T  RK    ++++ R    ++ ++R G     H +L +R  P      C+ CG+  
Sbjct:   356 ELTPTPTRKVLRVHQDLHRALSTIIVQMRTGKIGLRH-YLYQRGVPDVPNSDCQ-CGRAT 413

Query:   281 VYLNHWLTECHALGNLRRQ 299
               + H L  C     LR +
Sbjct:   414 QSVRHILLACPTFSGLREE 432


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      328       302   0.00097  115 3  11 22  0.49    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  617 (66 KB)
  Total size of DFA:  252 KB (2135 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:02
  No. of threads or processors used:  24
  Search cpu time:  27.37u 0.10s 27.47t   Elapsed:  00:00:11
  Total cpu time:  27.37u 0.10s 27.47t   Elapsed:  00:00:13
  Start:  Thu Aug 15 11:29:53 2013   End:  Thu Aug 15 11:30:06 2013

Back to top