BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy838
(152 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q568K5|NAA40_DANRE N-alpha-acetyltransferase 40 OS=Danio rerio GN=naa40 PE=2 SV=1
Length = 237
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Query: 45 EYKKSTDLGAETKKWVWELEEKNMKHSYEVCDIGWDPQGKHSEMFDDRACYLVAKNGSSS 104
E K+ T L +T +W +EL NM+ YE + GW + K EM D+RA YL+A++ + S
Sbjct: 58 ECKRVTALSPDTVEWAYELTRANMQTLYEQSEWGWKEREKREEMKDERAWYLLARD-ADS 116
Query: 105 TPVAFSHFRFDVDFGEPVLYCYELQLEKQVQRKGLGKFMMQAF 147
TP+AFSHFRFDV+ G+ VLYCYE+QLE +V+RKGLGKF++Q
Sbjct: 117 TPLAFSHFRFDVECGDEVLYCYEVQLESKVRRKGLGKFLIQIL 159
>sp|Q86UY6|NAA40_HUMAN N-alpha-acetyltransferase 40 OS=Homo sapiens GN=NAA40 PE=2 SV=1
Length = 237
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
Query: 45 EYKKSTDLGAETKKWVWELEEKNMKHSYEVCDIGWDPQGKHSEMFDDRACYLVAKNGSSS 104
E K+ + L T W ++L + NM+ YE + GW + K EM DDRA YL+A +SS
Sbjct: 58 ECKRVSGLEPATVDWAFDLTKTNMQTMYEQSEWGWKDREKREEMTDDRAWYLIAWE-NSS 116
Query: 105 TPVAFSHFRFDVDFGEPVLYCYELQLEKQVQRKGLGKFMMQAF 147
PVAFSHFRFDV+ G+ VLYCYE+QLE +V+RKGLGKF++Q
Sbjct: 117 VPVAFSHFRFDVECGDEVLYCYEVQLESKVRRKGLGKFLIQIL 159
>sp|Q8VE10|NAA40_MOUSE N-alpha-acetyltransferase 40 OS=Mus musculus GN=Naa40 PE=2 SV=1
Length = 237
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
Query: 45 EYKKSTDLGAETKKWVWELEEKNMKHSYEVCDIGWDPQGKHSEMFDDRACYLVAKNGSSS 104
E K+ + L T W ++L + NM+ YE + GW + K EM DDRA YL+A +SS
Sbjct: 58 ECKRVSGLEPATVDWAFDLTKTNMQTMYEQSEWGWKDREKREEMTDDRAWYLIAWE-NSS 116
Query: 105 TPVAFSHFRFDVDFGEPVLYCYELQLEKQVQRKGLGKFMMQAF 147
PVAFSHFRFDV+ G+ VLYCYE+QLE +V+RKGLGKF++Q
Sbjct: 117 IPVAFSHFRFDVECGDEVLYCYEVQLESKVRRKGLGKFLIQIL 159
>sp|Q6NUH2|NAA40_XENLA N-alpha-acetyltransferase 40 OS=Xenopus laevis GN=naa40 PE=2 SV=1
Length = 236
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Query: 48 KSTDLGAETKKWVWELEEKNMKHSYEVCDIGWDPQGKHSEMFDDRACYLVAKNGSSSTPV 107
K +DL +T W +EL + NM+ YE + GW + K E+ D+RA YL+A++ ++ V
Sbjct: 61 KVSDLDQKTIDWAFELTKTNMQLLYEQSEWGWKEREKREELTDERAWYLIARDELAAL-V 119
Query: 108 AFSHFRFDVDFGEPVLYCYELQLEKQVQRKGLGKFMMQAF 147
AF HFRFDV+ G+ VLYCYE+QLE +V+RKG+GKF++Q
Sbjct: 120 AFVHFRFDVECGDEVLYCYEVQLETRVRRKGVGKFLVQIL 159
>sp|Q9VMU4|RL37A_DROME 60S ribosomal protein L37a OS=Drosophila melanogaster GN=RpL37A
PE=1 SV=3
Length = 92
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 47/53 (88%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
MAKRTKKVGI GKYGTRYGASLRKMVKKMEITQH+KYTCSFCGK+ K +G
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVG 53
>sp|P61515|RL37P_RAT Putative 60S ribosomal protein L37a OS=Rattus norvegicus
GN=Rpl37a-ps1 PE=5 SV=2
Length = 92
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 46/53 (86%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
MAKRTKKVGI GKYGTRYGASLRKMVKK+EI+QHAKYTCSFCGK K +G
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVG 53
>sp|Q5RBF9|RL37A_PONAB 60S ribosomal protein L37a OS=Pongo abelii GN=RPL37A PE=3 SV=3
Length = 92
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 46/53 (86%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
MAKRTKKVGI GKYGTRYGASLRKMVKK+EI+QHAKYTCSFCGK K +G
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVG 53
>sp|P61514|RL37A_MOUSE 60S ribosomal protein L37a OS=Mus musculus GN=Rpl37a PE=2 SV=2
Length = 92
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 46/53 (86%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
MAKRTKKVGI GKYGTRYGASLRKMVKK+EI+QHAKYTCSFCGK K +G
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVG 53
>sp|P61513|RL37A_HUMAN 60S ribosomal protein L37a OS=Homo sapiens GN=RPL37A PE=1 SV=2
Length = 92
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 46/53 (86%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
MAKRTKKVGI GKYGTRYGASLRKMVKK+EI+QHAKYTCSFCGK K +G
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVG 53
>sp|Q3MIC0|RL37A_BOVIN 60S ribosomal protein L37a OS=Bos taurus GN=RPL37A PE=3 SV=3
Length = 92
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 46/53 (86%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
MAKRTKKVGI GKYGTRYGASLRKMVKK+EI+QHAKYTCSFCGK K +G
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVG 53
>sp|P32046|RL37A_CHICK 60S ribosomal protein L37a OS=Gallus gallus GN=RPL37A PE=2 SV=2
Length = 92
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 46/53 (86%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
MAKRTKKVGI GKYGTRYGASLRKMVKK+EI+QHAKYTCSFCGK K +G
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRKAVG 53
>sp|Q90YT0|RL37A_ICTPU 60S ribosomal protein L37a OS=Ictalurus punctatus GN=rpl37a PE=3
SV=3
Length = 92
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 46/53 (86%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
MAKRTKKVGI GKYGTRYGASLRKMVKK+EI+QHAKYTCSFCGK K +G
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVG 53
>sp|O61598|RL37A_OSTOS 60S ribosomal protein L37a OS=Ostertagia ostertagi GN=rpl-37a
PE=3 SV=3
Length = 91
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 46/53 (86%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
MAKRTKKVGI GKYGTRYGASLRKMVKKMEITQH++YTC FCGK+ + +G
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSRYTCPFCGKDAMRRGAVG 53
>sp|O61462|RL37A_CRYST 60S ribosomal protein L37a OS=Cryptochiton stelleri GN=RPL37A
PE=3 SV=3
Length = 92
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 45/53 (84%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
MAKRTKKVGI GKYGTRYGASLRK VKKMEITQH+KYTC FCGK+ K +G
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKTVKKMEITQHSKYTCQFCGKDAMKRQAVG 53
>sp|D4AAZ6|RL37A_RAT 60S ribosomal protein L37a OS=Rattus norvegicus GN=Rpl37a PE=1
SV=1
Length = 72
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 46/53 (86%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
MAKRTKKVGI GKYGTRYGASLRKMVKK+EI+QHAKYTCSFCGK K +G
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVG 53
>sp|Q7SZB4|RL37A_XENLA 60S ribosomal protein L37a OS=Xenopus laevis GN=rpl37a PE=3 SV=3
Length = 92
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 46/53 (86%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
MAKRTKKVGI GKYGTR+GASLRKMVKK+EI+QHAKYTCSFCGK K +G
Sbjct: 1 MAKRTKKVGIVGKYGTRFGASLRKMVKKIEISQHAKYTCSFCGKTKMKRKAVG 53
>sp|Q54UG4|RL37A_DICDI 60S ribosomal protein L37a OS=Dictyostelium discoideum GN=rpl37A
PE=3 SV=1
Length = 91
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 45/53 (84%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
MAKRTKKVG+ GKYGTRYGASLRK VKKMEITQH YTCSFCGK+ + + +G
Sbjct: 1 MAKRTKKVGVVGKYGTRYGASLRKQVKKMEITQHGTYTCSFCGKDAVRRSSVG 53
>sp|Q9U2A8|RL37A_CAEEL 60S ribosomal protein L37a OS=Caenorhabditis elegans GN=rpl-43
PE=3 SV=3
Length = 91
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 44/53 (83%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
MAKRTKKVGI GKYGTRYGASLRKM KK+E+ QH++YTCSFCGKE K G
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMAKKLEVAQHSRYTCSFCGKEAMKRKATG 53
>sp|Q23G98|RL37A_TETTS 60S ribosomal protein L37a OS=Tetrahymena thermophila (strain
SB210) GN=RPL37A PE=1 SV=1
Length = 103
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 43/53 (81%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
MAKRT+KVGIT KYGTRYGASLRK+VKK EITQHAKY C FCGK K +G
Sbjct: 1 MAKRTQKVGITRKYGTRYGASLRKVVKKFEITQHAKYGCPFCGKVAVKRAAVG 53
>sp|O96184|RL37A_PLAF7 60S ribosomal protein L37a OS=Plasmodium falciparum (isolate 3D7)
GN=RPL37A PE=3 SV=1
Length = 96
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 45/53 (84%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
M++RTKKVG+TGKYGTRYG+SLRK +KK+E+ QHAKY C+FCGK K T +G
Sbjct: 1 MSRRTKKVGLTGKYGTRYGSSLRKQIKKIELMQHAKYLCTFCGKTATKRTCVG 53
>sp|P0CX26|RL43B_YEAST 60S ribosomal protein L43-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL43B PE=1 SV=1
Length = 92
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 43/53 (81%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
MAKRTKKVGITGKYG RYG+SLR+ VKK+EI QHA+Y CSFCGK+ K G
Sbjct: 1 MAKRTKKVGITGKYGVRYGSSLRRQVKKLEIQQHARYDCSFCGKKTVKRGAAG 53
>sp|P0CX25|RL43A_YEAST 60S ribosomal protein L43-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL43A PE=1 SV=1
Length = 92
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 43/53 (81%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
MAKRTKKVGITGKYG RYG+SLR+ VKK+EI QHA+Y CSFCGK+ K G
Sbjct: 1 MAKRTKKVGITGKYGVRYGSSLRRQVKKLEIQQHARYDCSFCGKKTVKRGAAG 53
>sp|Q751L1|RL43_ASHGO 60S ribosomal protein L43 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPL43 PE=3
SV=1
Length = 92
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 43/53 (81%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
MAKRTKKVGITGKYG RYG+SLR+ VKK+E+ QHA+Y CSFCGK+ K G
Sbjct: 1 MAKRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHARYDCSFCGKKAVKRGAAG 53
>sp|Q6FRG6|RL43_CANGA 60S ribosomal protein L43 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPL43
PE=3 SV=1
Length = 92
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 41/45 (91%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKE 45
MAKRTKKVGITGKYG RYG+SLR+ VKK+E+ QHA+Y CSFCGK+
Sbjct: 1 MAKRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHARYDCSFCGKK 45
>sp|O17307|RL37A_SCHMA 60S ribosomal protein L37a (Fragment) OS=Schistosoma mansoni PE=3
SV=1
Length = 91
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 45/62 (72%), Gaps = 6/62 (9%)
Query: 3 KRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLGAETKKWVWE 62
KRTKKVGI GKYG RYGASLRK +KK+EI+QHAKY C+FCGK+ K G +WE
Sbjct: 2 KRTKKVGIVGKYGVRYGASLRKTIKKIEISQHAKYNCNFCGKDSLKRKAAG------IWE 55
Query: 63 LE 64
+
Sbjct: 56 CK 57
>sp|Q8RXU5|R37A2_ARATH 60S ribosomal protein L37a-2 OS=Arabidopsis thaliana GN=RPL37AC
PE=3 SV=1
Length = 92
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGK 44
MAKRTKKVGI GKYGTRYGAS+RK +KKME++QH+KY C FCGK
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGK 44
>sp|P43209|RL37A_BRARA 60S ribosomal protein L37a OS=Brassica rapa GN=RPL37A PE=3 SV=2
Length = 93
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGK 44
MAKRTKKVGI GKYGTRYGAS+RK +KKME++QH+KY C FCGK
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGK 44
>sp|A4S6Z4|RL37A_OSTLU 60S ribosomal protein L37a OS=Ostreococcus lucimarinus (strain
CCE9901) GN=RPL37a PE=3 SV=1
Length = 92
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGK 44
MAKRTKKVGI GKYGTRYGASLRK+VKK E++QH+K+ C FCGK
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKVVKKQEVSQHSKFFCDFCGK 44
>sp|Q9XHE4|RL37A_GOSHI 60S ribosomal protein L37a OS=Gossypium hirsutum GN=RPL37A PE=3
SV=1
Length = 92
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 41/53 (77%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
M KRTKK GI GKYGTRYGASLRK +KKME++QH+KY C FCGK K +G
Sbjct: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVG 53
>sp|Q00VK4|RL37A_OSTTA 60S ribosomal protein L37a OS=Ostreococcus tauri GN=RPL37a PE=3
SV=2
Length = 92
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGK 44
MAKRTKKVGI GKYGTRYGASLRK+VKK E++QH+K+ C FCGK
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKVVKKTEVSQHSKFFCDFCGK 44
>sp|Q5QM99|RL37A_ORYSJ 60S ribosomal protein L37a OS=Oryza sativa subsp. japonica
GN=Os01g0679700 PE=1 SV=1
Length = 92
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 41/53 (77%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
M KRTKK GI GKYGTRYGASLRK +KKME++QH+KY C FCGK K +G
Sbjct: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVG 53
>sp|Q9Y0H7|RL37A_MYXGL 60S ribosomal protein L37a (Fragment) OS=Myxine glutinosa
GN=rpl37a PE=3 SV=1
Length = 85
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 39/46 (84%)
Query: 8 VGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
VGI GKYGTRYGASLRKMVKK+EITQH+KYTC+FCGK K +G
Sbjct: 1 VGIVGKYGTRYGASLRKMVKKIEITQHSKYTCTFCGKTKMKRRAVG 46
>sp|Q9ZRS8|RL37A_PSEMZ 60S ribosomal protein L37a OS=Pseudotsuga menziesii GN=RPL37A
PE=3 SV=1
Length = 92
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 41/53 (77%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
M KRTKK GI GKYGTRYGASLRK +KKME++QH+K+ C FCGK K +G
Sbjct: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKFAVKRKAVG 53
>sp|Q9HGL8|RL43A_SCHPO 60S ribosomal protein L43-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl43a PE=3 SV=1
Length = 94
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 41/53 (77%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
M KRTKKVG+TGKYG RYGASLR+ V+K+E+ QH++Y C FCG+ K T G
Sbjct: 1 MTKRTKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRNTVKRTAAG 53
>sp|O94686|RL43B_SCHPO 60S ribosomal protein L43-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl43b PE=3 SV=1
Length = 94
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 41/53 (77%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
M KRTKKVG+TGKYG RYGASLR+ V+K+E+ QH++Y C FCG+ K T G
Sbjct: 1 MTKRTKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRLTVKRTAAG 53
>sp|Q9SRK6|R37A1_ARATH Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana
GN=RPL37AB PE=3 SV=1
Length = 92
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 36/44 (81%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGK 44
M KRTKK I GKYGTRYGASLRK +KKME++QH KY C FCGK
Sbjct: 1 MTKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGK 44
>sp|A6NKH3|RL37L_HUMAN Putative 60S ribosomal protein L37a-like OS=Homo sapiens
GN=RPL37L PE=5 SV=2
Length = 93
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 1 MAKRTKKVG-ITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGK 44
MAK TKKVG I KY T +GASL KMVK++EI+QH KYTCSFCGK
Sbjct: 1 MAKCTKKVGGIVSKYRTHHGASLWKMVKEIEISQHTKYTCSFCGK 45
>sp|B8D6B7|RL37A_DESK1 50S ribosomal protein L37Ae OS=Desulfurococcus kamchatkensis
(strain 1221n / DSM 18924) GN=rpl37ae PE=3 SV=1
Length = 86
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
Query: 4 RTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFC---GKEYKKSTDLGA 54
+TK VGI G+YGTRYG++LRK ++ + +++ +TC FC GK Y+ ST + A
Sbjct: 3 KTKVVGIAGRYGTRYGSTLRKKIRDILEKRYSPHTCPFCGHKGKVYRLSTGVWA 56
>sp|Q9USH6|YJQ4_SCHPO Uncharacterized N-acetyltransferase C825.04c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC825.04c PE=3 SV=1
Length = 204
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%)
Query: 61 WELEEKNMKHSYEVCDIGWDPQGKHSEMFDDRACYLVAKNGSSSTPVAFSHFRFDVDFGE 120
+ L +KNM+ Y GWD K EM ++ Y+ +S V F F V+ G
Sbjct: 53 FNLVKKNMEALYRQSSFGWDDSEKLKEMEMEKLEYICIFEKTSKKLVGFLSFEDTVEAGL 112
Query: 121 PVLYCYELQLEKQVQRKGLGKFMMQ 145
LY YE+QL++ ++ + +GK++++
Sbjct: 113 TCLYIYEIQLDEHIRGRNVGKWLLK 137
>sp|Q74N55|RL37A_NANEQ 50S ribosomal protein L37Ae OS=Nanoarchaeum equitans (strain
Kin4-M) GN=rpl37ae PE=3 SV=1
Length = 86
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 5 TKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFC 42
TKKVG TG++G RYG +RK V +EI Q K+ C FC
Sbjct: 6 TKKVGPTGRFGPRYGLGIRKRVLTVEIKQRKKHVCPFC 43
>sp|C6A452|RL37A_THESM 50S ribosomal protein L37Ae OS=Thermococcus sibiricus (strain MM
739 / DSM 12597) GN=rpl37ae PE=3 SV=1
Length = 85
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 4 RTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLGAETKKWVWEL 63
RTKKVG G++G RYG +R+ V +E K+TC CG++ + G +W+
Sbjct: 3 RTKKVGSAGRFGPRYGLKIRRRVAAVEEKMRQKHTCPVCGRKAVRRISTG------IWQC 56
Query: 64 EE 65
++
Sbjct: 57 QK 58
>sp|Q8TZI4|RL37A_PYRFU 50S ribosomal protein L37Ae OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl37ae PE=1 SV=1
Length = 83
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 5 TKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLGAETKKWVWELE 64
TKKVG G++G RYG +R+ V +E K+TC CG++ K G +W+ +
Sbjct: 4 TKKVGSAGRFGARYGLKIRRRVAAVEAKMRQKHTCPVCGRKAVKRISTG------IWQCQ 57
Query: 65 E 65
+
Sbjct: 58 K 58
>sp|Q8TYC3|RL37A_METKA 50S ribosomal protein L37Ae OS=Methanopyrus kandleri (strain AV19
/ DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl37ae PE=3
SV=1
Length = 89
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 4 RTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
RTKKVG G++G RYG +R+ V ++E Q K+ C C K K G
Sbjct: 3 RTKKVGPAGRFGPRYGMRIRRRVAEIESVQRQKHECPVCHKRAVKRVGTG 52
>sp|P54051|RL37A_METJA 50S ribosomal protein L37Ae OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 /
NBRC 100440) GN=rpl37ae PE=3 SV=1
Length = 92
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 5 TKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCG 43
TKKVG TG++G RYG +R V+ +EI KY C CG
Sbjct: 5 TKKVGPTGRFGPRYGLKIRVRVRDVEIKAKKKYKCPVCG 43
>sp|A5UNQ7|RL37A_METS3 50S ribosomal protein L37Ae OS=Methanobrevibacter smithii (strain
PS / ATCC 35061 / DSM 861) GN=rpl37ae PE=3 SV=1
Length = 89
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 4 RTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
RTKKVGITG++G RYG ++ VK +E + C C + Y K G
Sbjct: 3 RTKKVGITGRFGARYGRKAKRSVKMIEENMKKNHVCPRCDRPYVKRQAAG 52
>sp|O26777|RL37A_METTH 50S ribosomal protein L37Ae OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl37ae PE=3 SV=1
Length = 89
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 4 RTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFC 42
RTKKVGITG++G RYG ++ VKK+E K+ C C
Sbjct: 3 RTKKVGITGRFGPRYGRKAKRAVKKIEEEMKRKHVCPSC 41
>sp|Q9YC06|RL37A_AERPE 50S ribosomal protein L37Ae OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=rpl37ae PE=3 SV=1
Length = 86
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 4 RTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCG 43
RTK VG G+YG RYG S+RK V+ + ++ + C FCG
Sbjct: 3 RTKVVGPAGRYGPRYGVSVRKRVRDILARRYQPHECPFCG 42
>sp|O74106|RL37A_PYRHO 50S ribosomal protein L37Ae OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl37ae PE=3 SV=2
Length = 83
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 5 TKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
TKKVG G++G RYG +R+ V +E K+ C CG+ K G
Sbjct: 4 TKKVGSAGRFGARYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVKRISTG 52
>sp|Q9V202|RL37A_PYRAB 50S ribosomal protein L37Ae OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpl37ae PE=3 SV=1
Length = 83
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 5 TKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLGAETKKWVWELE 64
TKKVG G++G RYG +R+ V +E K+ C CG+ + G +W+ +
Sbjct: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTG------IWQCK 57
Query: 65 E 65
+
Sbjct: 58 K 58
>sp|Q9HIP0|RL37A_THEAC 50S ribosomal protein L37Ae OS=Thermoplasma acidophilum (strain
ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=rpl37ae PE=3 SV=1
Length = 80
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1 MAKRTKKVGITGKYGTRYGASLRKMVKKMEITQHAKYTCSFCGKEYKKSTDLG 53
M+KRT KVG+ G++G RYG ++RK ++ + A YTC C K+ K G
Sbjct: 1 MSKRTVKVGVAGRFGPRYGVTIRKEWSEIYKQKIALYTCPSCKKKRVKRVANG 53
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,556,649
Number of Sequences: 539616
Number of extensions: 2287644
Number of successful extensions: 9282
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 9142
Number of HSP's gapped (non-prelim): 168
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)