BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8382
(864 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 162 EFIDAMHQFAGQSP-DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF A+ F +P DDKI F F++YDL G I+ +E++ ++ A + E+GM + I+
Sbjct: 75 EFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIE 134
Query: 221 HLTMALFEDADSENRGAITYESLKNQLEKHGGLLENLSI 259
+ FE+AD+++ G I E ++ + +H LL+N+++
Sbjct: 135 DIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTL 173
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 161 NEFIDAMHQFAGQSP-DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQI 219
EF A+ F +P DDKI F F++YDL G I+ +E++ ++ A + E+GM + I
Sbjct: 105 EEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVI 164
Query: 220 DHLTMALFEDADSENRGAITYESLKNQLEKHGGLLENLSI 259
+ + FE+AD+++ G I E ++ + +H LL+N+++
Sbjct: 165 EDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTL 204
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Query: 157 LITKNEFIDAMHQFAGQSP-DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFS 215
+I EF+ ++ F +P +K+KF F++YDL G I+ +EL+ ++ A + E+ + S
Sbjct: 90 VIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLS 149
Query: 216 EEQIDHLTMALFEDADSENRGAITYESLKNQLEKHGGLLENLSI 259
E+ I+ + F AD +N G I + K+ + + L++N+++
Sbjct: 150 EDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKNMTL 193
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Query: 157 LITKNEFIDAMHQFAGQSP-DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFS 215
+I EF+ ++ F +P +K+KF F++YDL G I+ +EL+ ++ A + E+ + S
Sbjct: 90 VIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLS 149
Query: 216 EEQIDHLTMALFEDADSENRGAITYESLKNQLEKHGGLLENLSI 259
E+ I+ + F AD +N G I + K+ + + L++N+++
Sbjct: 150 EDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKNMTL 193
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 174 SPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSE 233
S +K+ + F++YDLD DG I E+ V+R + G+Q +EEQ++++ ++AD +
Sbjct: 111 SRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMV---GVQVTEEQLENIADRTVQEADED 167
Query: 234 NRGAITYESLKNQLEK 249
GA+++ LEK
Sbjct: 168 GDGAVSFVEFTKSLEK 183
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 162 EFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQ-FSEEQID 220
EFI A++ + + K+K+ F++YD DG+G I EL + A NG Q S E+
Sbjct: 78 EFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFI 137
Query: 221 HLTMALFEDADSENRGAITYESLKNQLEKHGGLLENLSISID 262
+L +F D N G +T E N + K LLE + S D
Sbjct: 138 NL---VFHKIDINNDGELTLEEFINGMAKDQDLLEIVYKSFD 176
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 162 EFIDAMHQFAGQ-SPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EFI+ + QF+ + + K++F FR+YD+D DG I + EL V++ + G + Q+
Sbjct: 60 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKDTQLQ 116
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G I++E
Sbjct: 117 QIVDKTIINADKDGDGRISFEEF 139
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 162 EFIDAMHQFAGQ-SPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EFI+ + QF+ + + K++F FR+YD+D DG I + EL V++ + G + Q+
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKDTQLQ 115
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G I++E
Sbjct: 116 QIVDKTIINADKDGDGRISFEEF 138
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 162 EFIDAMHQFAGQ-SPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EFI+ + QF+ + + K++F FR+YD+D DG I + EL V++ + G + Q+
Sbjct: 74 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKDTQLQ 130
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G I++E
Sbjct: 131 QIVDKTIINADKDGDGRISFEEF 153
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 162 EFIDAMHQFAGQ-SPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EFI+ + QF+ + + K++F FR+YD+D DG I + EL V++ + G + Q+
Sbjct: 73 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMV---GNNLKDTQLQ 129
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G I++E
Sbjct: 130 QIVDKTIINADKDGDGRISFEEF 152
>pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
pdb|3A8R|B Chain B, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
Length = 179
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 10/128 (7%)
Query: 120 CLPRSGFDKGNLEWLEQLFRQTVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKI 179
C+ G D+ ++ + L R+ R K++L TK+E D Q Q D+++
Sbjct: 51 CIGMDGSDEFAVQMFDSLARK---------RGIVKQVL-TKDELKDFYEQLTDQGFDNRL 100
Query: 180 KFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAIT 239
+ F + D + DG + +E++ ++ N + +E+ D T + E+ D N G I
Sbjct: 101 RTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIE 160
Query: 240 YESLKNQL 247
E L+ L
Sbjct: 161 MEDLEALL 168
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF++ M + ++K+K FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 67 EFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNL----GEKLTDEEVD 122
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 123 E----MIREADVDGDGQVNYEEF 141
Score = 33.5 bits (75), Expect = 0.50, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 171 AGQSPDDKI---KFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALF 227
A Q D++I K F ++D DGDG I KEL VMR+ G +E ++ +
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MI 52
Query: 228 EDADSENRGAITYESLKNQLEK 249
+ D++ G I + N + +
Sbjct: 53 NEVDADGNGTIDFPEFLNLMAR 74
Score = 31.6 bits (70), Expect = 2.2, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E ++ F+ N FI A M + D+++ + R D+DGDG + ++
Sbjct: 80 DSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYE 139
Query: 198 ELQHVMRA 205
E VM A
Sbjct: 140 EFVQVMMA 147
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 46.2 bits (108), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 174 SPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSE 233
S +K+ F FR+YDLD D I EL V+R + G+ S+EQ+ + ++AD +
Sbjct: 110 SRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMV---GVNISDEQLGSIADRTIQEADQD 166
Query: 234 NRGAITYESLKNQLEK 249
AI++ LEK
Sbjct: 167 GDSAISFTEFVKVLEK 182
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G + EL+HVM G + S+E++D
Sbjct: 67 EFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRL----GEKLSDEEVD 122
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ A AD++ G + YE
Sbjct: 123 EMIRA----ADTDGDGQVNYEEF 141
Score = 30.0 bits (66), Expect = 6.3, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N F+ A M + + D+++ + R D DGDG + ++
Sbjct: 80 DNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYE 139
Query: 198 ELQHVM 203
E V+
Sbjct: 140 EFVRVL 145
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 174 SPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSE 233
S +K+ F FR+YDLD D I EL V+R + G+ S+EQ+ + ++AD +
Sbjct: 110 SRSNKLHFAFRLYDLDKDEKISRDELLQVLRMMV---GVNISDEQLGSIADRTIQEADQD 166
Query: 234 NRGAITYESLKNQLEK 249
AI++ LEK
Sbjct: 167 GDSAISFTEFVKVLEK 182
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 152 DFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG 211
DF++ L+ + M + A ++++ LFR++D + DG I +EL + RA +G
Sbjct: 71 DFEEFLVM---MVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRA----SG 123
Query: 212 MQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLE 248
++E+I+ +L +D D N G I ++ +E
Sbjct: 124 EHVTDEEIE----SLMKDGDKNNDGRIDFDEFLKMME 156
Score = 35.0 bits (79), Expect = 0.18, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DG G I KEL VMR G ++E++D A+ E+ D + G
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRML----GQTPTKEELD----AIIEEVDEDGSGT 69
Query: 238 ITYESL 243
I +E
Sbjct: 70 IDFEEF 75
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF++ M + ++++K FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 64 EFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNL----GEKLTDEEVD 119
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 120 E----MIREADVDGDGQVNYEEF 138
Score = 32.3 bits (72), Expect = 1.3, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 59
Query: 238 ITYESLKNQLEK 249
I + N + +
Sbjct: 60 IDFPEFLNLMAR 71
Score = 31.2 bits (69), Expect = 2.5, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E ++ F+ N FI A M + D+++ + R D+DGDG + ++
Sbjct: 77 DSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYE 136
Query: 198 ELQHVMRA 205
E VM A
Sbjct: 137 EFVQVMMA 144
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF++ M + ++++K FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 67 EFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNL----GEKLTDEEVD 122
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 123 E----MIREADVDGDGQVNYEEF 141
Score = 33.5 bits (75), Expect = 0.48, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 171 AGQSPDDKI---KFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALF 227
A Q D++I K F ++D DGDG I KEL VMR+ G +E ++ +
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MI 52
Query: 228 EDADSENRGAITYESLKNQLEK 249
+ D++ G I + N + +
Sbjct: 53 NEVDADGNGTIDFPEFLNLMAR 74
Score = 31.2 bits (69), Expect = 2.5, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E ++ F+ N FI A M + D+++ + R D+DGDG + ++
Sbjct: 80 DSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYE 139
Query: 198 ELQHVMRA 205
E VM A
Sbjct: 140 EFVQVMMA 147
>pdb|2D8M|A Chain A, Solution Structure Of The First Brct Domain Of Dna-Repair
Protein Xrcc1
Length = 129
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 528 LGAGYQEEFMKRDNPKNNKKASTHLVCPTCSGSKYNAALKWGFPSVNKKWLLECARTGKR 587
LGA Y+ ++ RD STHL+C + KY+ L G V K+W+L+C R +R
Sbjct: 48 LGAKYRPDWT-RD--------STHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRR 98
Query: 588 VSEQQYLTGSDEAS 601
+ Q+YL +S
Sbjct: 99 LPSQRYLMAGPGSS 112
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL----GEKLTDEEVD 122
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 123 E----MIREADIDGDGQVNYEEF 141
Score = 30.8 bits (68), Expect = 3.0, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N FI A M + D+++ + R D+DGDG + ++
Sbjct: 80 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 140 EFVTMMTA 147
Score = 30.8 bits (68), Expect = 3.3, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 62
Query: 238 ITY 240
I +
Sbjct: 63 IDF 65
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 162 EFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDH 221
EF+ M + S +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 67 EFLTMMARKMKDS-EEEIREAFRVFDKDGNGFISAAELRHVMTNL----GEKLTDEEVDE 121
Query: 222 LTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 122 ----MIREADIDGDGQVNYEEF 139
Score = 32.7 bits (73), Expect = 0.94, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 132 EWLEQLFRQTVGDEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRV 185
E+L + R+ E+EI R+ F+ N FI A M + D+++ + R
Sbjct: 67 EFLTMMARKMKDSEEEI-REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRE 125
Query: 186 YDLDGDGLIQHKELQHVM 203
D+DGDG + ++E +M
Sbjct: 126 ADIDGDGQVNYEEFVTMM 143
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 62
Query: 238 ITY 240
I +
Sbjct: 63 IDF 65
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL----GEKLTDEEVD 123
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 124 E----MIREADIDGDGQVNYEEF 142
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 63
Query: 238 ITY 240
I +
Sbjct: 64 IDF 66
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL----GEKLTDEEVD 123
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 124 E----MIREADIDGDGQVNYEEF 142
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 63
Query: 238 ITY 240
I +
Sbjct: 64 IDF 66
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL----GEKLTDEEVD 122
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 123 E----MIREADIDGDGQVNYEEF 141
Score = 30.8 bits (68), Expect = 3.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 62
Query: 238 ITY 240
I +
Sbjct: 63 IDF 65
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 162 EFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDH 221
EF+ M + + ++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 63 EFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVDE 118
Query: 222 LTMALFEDADSENRGAITYESL 243
+ +A+ + G + YE
Sbjct: 119 ----MIREANIDGDGQVNYEEF 136
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 58
Query: 238 ITY 240
I +
Sbjct: 59 IDF 61
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 123
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 124 E----MIREADIDGDGQVNYEEF 142
Score = 30.8 bits (68), Expect = 3.0, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 63
Query: 238 ITY 240
I +
Sbjct: 64 IDF 66
Score = 30.8 bits (68), Expect = 3.6, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 141 EFVQMMTA 148
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 123
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 124 Q----MIREADIDGDGQVNYEEF 142
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 63
Query: 238 ITY 240
I +
Sbjct: 64 IDF 66
Score = 30.4 bits (67), Expect = 4.1, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYE 140
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 141 EFVQMMTA 148
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 65 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 120
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 121 E----MIREADIDGDGQVNYEEF 139
Score = 30.8 bits (68), Expect = 3.0, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 60
Query: 238 ITY 240
I +
Sbjct: 61 IDF 63
Score = 30.8 bits (68), Expect = 3.7, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 78 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 138 EFVQMMTA 145
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 122
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 123 E----MIREADIDGDGQVNYEEF 141
Score = 30.8 bits (68), Expect = 3.7, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 140 EFVQMMTA 147
Score = 30.4 bits (67), Expect = 4.3, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGDGT 62
Query: 238 ITY 240
I +
Sbjct: 63 IDF 65
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 123
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 124 E----MIREADIDGDGQVNYEEF 142
Score = 30.8 bits (68), Expect = 3.1, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 63
Query: 238 ITY 240
I +
Sbjct: 64 IDF 66
Score = 30.8 bits (68), Expect = 3.7, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 141 EFVQMMTA 148
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 123
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 124 E----MIREADIDGDGQVNYEEF 142
Score = 30.8 bits (68), Expect = 3.2, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 63
Query: 238 ITY 240
I +
Sbjct: 64 IDF 66
Score = 30.4 bits (67), Expect = 3.9, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 141 EFVQMMTA 148
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 64 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 119
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 120 E----MIREADIDGDGQVNYEEF 138
Score = 30.8 bits (68), Expect = 3.2, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 59
Query: 238 ITY 240
I +
Sbjct: 60 IDF 62
Score = 30.8 bits (68), Expect = 3.8, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 77 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 136
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 137 EFVQMMTA 144
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 152 DFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG 211
DF++ L+ + M + A +++++ FR++D + DG I +EL ++RA G
Sbjct: 74 DFEEFLVM---MVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRA----TG 126
Query: 212 MQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLE 248
+EE I+ L +D+D N G I ++ +E
Sbjct: 127 EHVTEEDIED----LMKDSDKNNDGRIDFDEFLKMME 159
Score = 35.8 bits (81), Expect = 0.099, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DG G I KEL VMR G ++E++D A+ E+ D + G
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRML----GQNPTKEELD----AIIEEVDEDGSGT 72
Query: 238 ITYESL 243
I +E
Sbjct: 73 IDFEEF 78
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 123
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 124 E----MIREADIDGDGQVNYEEF 142
Score = 30.8 bits (68), Expect = 3.3, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 63
Query: 238 ITY 240
I +
Sbjct: 64 IDF 66
Score = 30.4 bits (67), Expect = 4.1, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 141 EFVQMMTA 148
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 122
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 123 E----MIREADIDGDGQVNYEEF 141
Score = 30.8 bits (68), Expect = 3.3, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 62
Query: 238 ITY 240
I +
Sbjct: 63 IDF 65
Score = 30.4 bits (67), Expect = 4.0, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 140 EFVQMMTA 147
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 73 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 128
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 129 E----MIREADIDGDGQVNYEEF 147
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 17 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 68
Query: 238 ITY 240
I +
Sbjct: 69 IDF 71
Score = 30.4 bits (67), Expect = 4.0, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 86 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 145
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 146 EFVQMMTA 153
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 122
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 123 E----MIREADIDGDGQVNYEEF 141
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 62
Query: 238 ITY 240
I +
Sbjct: 63 IDF 65
Score = 30.4 bits (67), Expect = 4.0, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 140 EFVQMMTA 147
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 63 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 118
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 119 E----MIREADIDGDGQVNYEEF 137
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 58
Query: 238 ITY 240
I +
Sbjct: 59 IDF 61
Score = 30.4 bits (67), Expect = 4.0, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 76 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 135
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 136 EFVQMMTA 143
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 69 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 124
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 125 E----MIREADIDGDGQVNYEEF 143
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 13 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 64
Query: 238 ITY 240
I +
Sbjct: 65 IDF 67
Score = 30.4 bits (67), Expect = 4.1, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 82 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 141
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 142 EFVQMMTA 149
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 65 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 120
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 121 E----MIREADIDGDGQVNYEEF 139
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 60
Query: 238 ITY 240
I +
Sbjct: 61 IDF 63
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 71 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 126
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 127 E----MIREADIDGDGQVNYEEF 145
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 15 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 66
Query: 238 ITY 240
I +
Sbjct: 67 IDF 69
Score = 30.4 bits (67), Expect = 4.2, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 84 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 144 EFVQMMTA 151
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 65 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 120
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 121 E----MIREADIDGDGQVNYEEF 139
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 60
Query: 238 ITY 240
I +
Sbjct: 61 IDF 63
Score = 30.4 bits (67), Expect = 4.2, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 78 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 138 EFVQMMTA 145
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 66 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 121
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 122 E----MIREADIDGDGQVNYEEF 140
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 61
Query: 238 ITY 240
I +
Sbjct: 62 IDF 64
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
+++I+ FRV+D DG+G I EL+HVM G + ++E++D + +AD +
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVDE----MIREADIDGD 52
Query: 236 GAITYESL 243
G + YE
Sbjct: 53 GQVNYEEF 60
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
+++I+ FRV+D DG+G I EL+HVM G + ++E++D + +AD +
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVDE----MIREADIDGD 55
Query: 236 GAITYESL 243
G + YE
Sbjct: 56 GQVNYEEF 63
Score = 30.8 bits (68), Expect = 3.2, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 62 EFVQMMTA 69
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
+++I+ FRV+D DG+G I EL+HVM G + ++E++D + +AD +
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVDE----MIREADIDGD 55
Query: 236 GAITYESL 243
G + YE
Sbjct: 56 GQVNYEEF 63
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 152 DFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG 211
DF++ L+ + M + A ++++ FR++D + DG I +EL ++RA G
Sbjct: 74 DFEEFLVM---MVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRA----TG 126
Query: 212 MQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLE 248
+EE I+ L +D+D N G I ++ +E
Sbjct: 127 EHVTEEDIED----LMKDSDKNNDGRIDFDEFLKMME 159
Score = 35.8 bits (81), Expect = 0.099, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DG G I KEL VMR G ++E++D A+ E+ D + G
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRML----GQNPTKEELD----AIIEEVDEDGSGT 72
Query: 238 ITYESL 243
I +E
Sbjct: 73 IDFEEF 78
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
+++I+ FRV+D DG+G I EL+HVM G + ++E++D + +AD +
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVDE----MIREADIDGD 56
Query: 236 GAITYESL 243
G + YE
Sbjct: 57 GQVNYEEF 64
Score = 30.8 bits (68), Expect = 3.2, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 3 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 63 EFVQMMTA 70
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 152 DFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG 211
DF++ L+ + M + A ++++ FR++D + DG I +EL + RA +G
Sbjct: 71 DFEEFLVM---MVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRA----SG 123
Query: 212 MQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLE 248
++E+I+ +L +D D N G I ++ +E
Sbjct: 124 EHVTDEEIE----SLMKDGDKNNDGRIDFDEFLKMME 156
Score = 35.0 bits (79), Expect = 0.18, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DG G I KEL VMR G ++E++D A+ E+ D + G
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRML----GQTPTKEELD----AIIEEVDEDGSGT 69
Query: 238 ITYESL 243
I +E
Sbjct: 70 IDFEEF 75
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 152 DFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG 211
DF++ L+ + M + A ++++ FR++D + DG I +EL ++RA G
Sbjct: 71 DFEEFLVM---MVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRA----TG 123
Query: 212 MQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLE 248
+EE I+ L +D+D N G I ++ +E
Sbjct: 124 EHVTEEDIED----LMKDSDKNNDGRIDFDEFLKMME 156
Score = 35.8 bits (81), Expect = 0.10, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DG G I KEL VMR G ++E++D A+ E+ D + G
Sbjct: 18 EFKAAFDMFDADGGGDISTKELGTVMRML----GQNPTKEELD----AIIEEVDEDGSGT 69
Query: 238 ITYESL 243
I +E
Sbjct: 70 IDFEEF 75
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
+++I+ FRV+D DG+G I EL+HVM G + ++E++D + +AD +
Sbjct: 7 EEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVDE----MIREADIDGD 58
Query: 236 GAITYESL 243
G + YE
Sbjct: 59 GQVNYEEF 66
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 5 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 64
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 65 EFVQMMTA 72
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 152 DFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG 211
DF++ L+ + M + A ++++ FR++D + DG I +EL ++RA G
Sbjct: 74 DFEEFLVM---MVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRA----TG 126
Query: 212 MQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLE 248
+EE I+ L +D+D N G I ++ +E
Sbjct: 127 EHVTEEDIED----LMKDSDKNNDGRIDFDEFLKMME 159
Score = 35.8 bits (81), Expect = 0.099, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DG G I KEL VMR G ++E++D A+ E+ D + G
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRML----GQNPTKEELD----AIIEEVDEDGSGT 72
Query: 238 ITYESL 243
I +E
Sbjct: 73 IDFEEF 78
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
+++I+ FRV+D DG+G I EL+HVM G + ++E++D + +AD +
Sbjct: 8 EEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVDE----MIREADIDGD 59
Query: 236 GAITYESL 243
G + YE
Sbjct: 60 GQVNYEEF 67
Score = 30.8 bits (68), Expect = 3.6, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 6 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 65
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 66 EFVQMMTA 73
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G ++E++D
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEXLTDEEVD 123
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 124 E----MIREADIDGDGQVNYEEF 142
Score = 30.8 bits (68), Expect = 3.3, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 63
Query: 238 ITY 240
I +
Sbjct: 64 IDF 66
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G ++E++D
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEXLTDEEVD 122
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 123 E----MIREADIDGDGQVNYEEF 141
Score = 30.8 bits (68), Expect = 3.3, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 62
Query: 238 ITY 240
I +
Sbjct: 63 IDF 65
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 153 FKKILITKNEFIDAMHQFAGQS------PDDKIKFLFRVYDLDGDGLIQHKELQHVMRAC 206
F+ K+ +ID M A S D K+++ F++YD+DG+G I EL ++++A
Sbjct: 58 FETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAI 117
Query: 207 MEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHGGLLENLSISID 262
N + T +F+ D G ++ E ++K LL+ L+ S+D
Sbjct: 118 RAINRCN-EAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDILTRSLD 172
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 42.7 bits (99), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 68 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL----GEKLTDEEVD 123
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ ++D + G + YE
Sbjct: 124 E----MIRESDIDGDGQVNYEEF 142
Score = 30.4 bits (67), Expect = 3.9, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 63
Query: 238 ITY 240
I +
Sbjct: 64 IDF 66
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 42.7 bits (99), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + Q ++++ F+V+D DG+GLI EL+HVM G + +++++D
Sbjct: 67 EFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNL----GEKLTDDEVD 122
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G I YE
Sbjct: 123 E----MIREADIDGDGHINYEEF 141
Score = 31.6 bits (70), Expect = 2.0, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 157 LITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVM 203
LI+ E M + DD++ + R D+DGDG I ++E +M
Sbjct: 99 LISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
Score = 30.8 bits (68), Expect = 3.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 62
Query: 238 ITY 240
I +
Sbjct: 63 IDF 65
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 42.7 bits (99), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + Q ++++ F+V+D DG+GLI EL+HVM G + +++++D
Sbjct: 67 EFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNL----GEKLTDDEVD 122
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G I YE
Sbjct: 123 E----MIREADIDGDGHINYEEF 141
Score = 31.6 bits (70), Expect = 2.0, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 157 LITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVM 203
LI+ E M + DD++ + R D+DGDG I ++E +M
Sbjct: 99 LISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
Score = 30.8 bits (68), Expect = 3.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 62
Query: 238 ITY 240
I +
Sbjct: 63 IDF 65
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 42.7 bits (99), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF++ M + ++++K FRV+D D +G I EL+HVM G + ++E++D
Sbjct: 68 EFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL----GEKLTDEEVD 123
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G I YE
Sbjct: 124 E----MIREADVDGDGQINYEEF 142
Score = 35.4 bits (80), Expect = 0.16, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 171 AGQSPDDKI---KFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALF 227
A Q DD+I K F ++D DGDG I KEL VMR+ G +E ++ +
Sbjct: 2 ADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSL----GQNPTEAELQD----MI 53
Query: 228 EDADSENRGAITYESLKNQLEK 249
+ D++ G I + N + +
Sbjct: 54 NEVDADGNGTIDFPEFLNLMAR 75
Score = 32.3 bits (72), Expect = 1.1, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E ++ F+ +N FI A M + D+++ + R D+DGDG I ++
Sbjct: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 140
Query: 198 ELQHVMRA 205
E VM A
Sbjct: 141 EFVKVMMA 148
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
+++I+ FRV+D DG+G I EL+HVM G + ++E++D + +AD +
Sbjct: 374 EEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVDE----MIREADIDGD 425
Query: 236 GAITYESL 243
G + YE
Sbjct: 426 GQVNYEEF 433
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 372 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 431
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 432 EFVQMMTA 439
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRA 205
+ K F ++D DGDG I KEL VMR+
Sbjct: 303 EFKEAFSLFDKDGDGTITTKELGTVMRS 330
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 162 EFIDAMHQFAGQS-PDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M ++ + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 368 EFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 423
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 424 E----MIREADIDGDGQVNYEEF 442
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 441 EFVQMMTA 448
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 363
Query: 238 ITY 240
I +
Sbjct: 364 IDF 366
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 368 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 423
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 424 E----MIREADIDGDGQVNYEEF 442
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 441 EFVQMMTA 448
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 363
Query: 238 ITY 240
I +
Sbjct: 364 IDF 366
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 369 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 424
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 425 E----MIREADIDGDGQVNYEEF 443
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 382 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 441
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 442 EFVQMMTA 449
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 313 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 364
Query: 238 ITY 240
I +
Sbjct: 365 IDF 367
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 368 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 423
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 424 E----MIREADIDGDGQVNYEEF 442
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 441 EFVQMMTA 448
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 363
Query: 238 ITY 240
I +
Sbjct: 364 IDF 366
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 367 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 422
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 423 E----MIREADIDGDGQVNYEEF 441
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRAC 206
+ K F ++D DGDG I KEL VMR+
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSL 339
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 380 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 440 EFVQMMTA 447
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 331 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 386
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 387 E----MIREADIDGDGQVNYEEF 405
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 275 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAEL----QDMINEVDADGNGT 326
Query: 238 ITY 240
I +
Sbjct: 327 IDF 329
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 344 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 403
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 404 EFVQMMTA 411
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 334 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 389
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 390 E----MIREADIDGDGQVNYEEF 408
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAEL----QDMINEVDADGNGT 329
Query: 238 ITY 240
I +
Sbjct: 330 IDF 332
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 347 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 406
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 407 EFVQMMTA 414
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 334 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 389
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G + YE
Sbjct: 390 E----MIREADIDGDGQVNYEEF 408
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAEL----QDMINEVDADGNGT 329
Query: 238 ITY 240
I +
Sbjct: 330 IDF 332
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E R+ F+ N +I A M + D+++ + R D+DGDG + ++
Sbjct: 347 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 406
Query: 198 ELQHVMRA 205
E +M A
Sbjct: 407 EFVQMMTA 414
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
+++I+ FRV+D DG+G I EL+HVM G + ++E++D + +AD +
Sbjct: 383 EEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVDE----MIREADIDGD 434
Query: 236 GAITYESL 243
G + YE
Sbjct: 435 GQVNYEEF 442
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 132 EWLEQLFRQT-VGDEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFR 184
E+L + R+ D +E R+ F+ N +I A M + D+++ + R
Sbjct: 368 EFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 427
Query: 185 VYDLDGDGLIQHKELQHVMRA 205
D+DGDG + ++E +M A
Sbjct: 428 EADIDGDGQVNYEEFVQMMTA 448
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 363
Query: 238 ITY 240
I +
Sbjct: 364 IDF 366
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
+++I+ FRV+D DG+G I EL+HVM G + ++E++D + +AD +
Sbjct: 383 EEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVDE----MIREADIDGD 434
Query: 236 GAITYESL 243
G + YE
Sbjct: 435 GQVNYEEF 442
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 132 EWLEQLFRQT-VGDEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFR 184
E+L + R+ D +E R+ F+ N +I A M + D+++ + R
Sbjct: 368 EFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 427
Query: 185 VYDLDGDGLIQHKELQHVMRA 205
D+DGDG + ++E +M A
Sbjct: 428 EADIDGDGQVNYEEFVQMMTA 448
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRAC 206
+ K F ++D DGDG I KEL VMR+
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSL 340
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
+++I+ FRV+D DG+G I EL+HVM G + ++E++D + +AD +
Sbjct: 382 EEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVDE----MIREADIDGD 433
Query: 236 GAITYESL 243
G + YE
Sbjct: 434 GQVNYEEF 441
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 132 EWLEQLFRQT-VGDEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFR 184
E+L + R+ D +E R+ F+ N +I A M + D+++ + R
Sbjct: 367 EFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 426
Query: 185 VYDLDGDGLIQHKELQHVMRA 205
D+DGDG + ++E +M A
Sbjct: 427 EADIDGDGQVNYEEFVQMMTA 447
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRAC 206
+ K F ++D DGDG I KEL VMR+
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSL 339
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
+++I+ FRV+D DG+G I EL+HVM G + ++E++D + +AD +
Sbjct: 382 EEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVDE----MIREADIDGD 433
Query: 236 GAITYESL 243
G + YE
Sbjct: 434 GQVNYEEF 441
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 132 EWLEQLFRQT-VGDEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFR 184
E+L + R+ D +E R+ F+ N +I A M + D+++ + R
Sbjct: 367 EFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIR 426
Query: 185 VYDLDGDGLIQHKELQHVMRA 205
D+DGDG + ++E +M A
Sbjct: 427 EADIDGDGQVNYEEFVQMMTA 447
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRAC 206
+ K F ++D DGDG I KEL VMR+
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSL 339
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
+++I+ FRV+D DG+G I +L+HVM G + ++E++D + +AD +
Sbjct: 6 EEEIREAFRVFDKDGNGYISAADLRHVMTNL----GEKLTDEEVDE----MIREADIDGD 57
Query: 236 GAITYESL 243
G + YE
Sbjct: 58 GQVNYEDF 65
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 173 QSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADS 232
Q ++++ F+V+D DG+GLI EL+HVM G + +++++D + +AD
Sbjct: 4 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNL----GEKLTDDEVDE----MIREADI 55
Query: 233 ENRGAITYESL 243
+ G I YE
Sbjct: 56 DGDGHINYEEF 66
Score = 31.6 bits (70), Expect = 1.8, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 157 LITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVM 203
LI+ E M + DD++ + R D+DGDG I ++E +M
Sbjct: 24 LISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMM 70
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 152 DFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG 211
DF++ L+ + M + A ++++ FR++D + DG I +EL ++RA G
Sbjct: 74 DFEEFLVM---MVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRA----TG 126
Query: 212 MQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLE 248
EE I+ L +D+D N G I ++ +E
Sbjct: 127 EHVIEEDIED----LMKDSDKNNDGRIDFDEFLKMME 159
Score = 35.8 bits (81), Expect = 0.099, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DG G I KEL VMR G ++E++D A+ E+ D + G
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRML----GQNPTKEELD----AIIEEVDEDGSGT 72
Query: 238 ITYESL 243
I +E
Sbjct: 73 IDFEEF 78
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF+ M + +++I+ FRV+D DG+G I EL+HVM G + ++E++D
Sbjct: 67 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEVD 122
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +A+ + G + YE
Sbjct: 123 E----MIREANIDGDGQVNYEEF 141
Score = 30.8 bits (68), Expect = 3.7, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 62
Query: 238 ITY 240
I +
Sbjct: 63 IDF 65
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
++++K FRV+D D +G I EL+HVM G + ++E++D + +AD +
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNL----GEKLTDEEVDE----MIREADVDGD 54
Query: 236 GAITYESL 243
G I YE
Sbjct: 55 GQINYEEF 62
Score = 32.7 bits (73), Expect = 0.90, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E ++ F+ +N FI A M + D+++ + R D+DGDG I ++
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 198 ELQHVMRA 205
E VM A
Sbjct: 61 EFVKVMMA 68
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF++ M + ++++K FRV+D D +G I EL+HVM G + ++E++D
Sbjct: 68 EFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL----GEKLTDEEVD 123
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G I Y+
Sbjct: 124 E----MIREADVDGDGQINYDEF 142
Score = 33.5 bits (75), Expect = 0.53, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 171 AGQSPDDKI---KFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALF 227
A Q +D+I K F ++D DGDG I KEL VMR+ G +E ++ +
Sbjct: 2 ADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSL----GQNPTEAELQD----MI 53
Query: 228 EDADSENRGAITYESLKNQLEK 249
+ D++ G I + N + +
Sbjct: 54 NEVDADGNGTIDFPEFLNLMAR 75
Score = 32.0 bits (71), Expect = 1.6, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 144 DEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHK 197
D +E ++ F+ +N FI A M + D+++ + R D+DGDG I +
Sbjct: 81 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYD 140
Query: 198 ELQHVMRA 205
E VM A
Sbjct: 141 EFVKVMMA 148
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 12/117 (10%)
Query: 151 DDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRAC--ME 208
D+ K I +EFI A+ + + D+K+++ F++YDLD DG I E+ ++ A M
Sbjct: 73 DENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMV 132
Query: 209 ENGMQFSEEQ------IDHLTMALFEDADSENRGAITYESLKNQLEKHGGLLENLSI 259
N ++ EE+ +D + + ++AD G +T + + + +++ LS+
Sbjct: 133 GNTVELPEEENTPEKRVDRIFAMMDKNAD----GKLTLQEFQEGSKADPSIVQALSL 185
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
+++I+ FRV D DG+G I EL+HVM G + ++E++D + +AD +
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNL----GEKLTDEEVDE----MIREADIDGD 79
Query: 236 GAITYESL 243
G + YE
Sbjct: 80 GQVNYEEF 87
Score = 30.0 bits (66), Expect = 5.7, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 133 WLEQLFRQTVGDEKEICRDDFKKILITKNEFIDA------MHQFAGQSPDDKIKFLFRVY 186
+ + L + T D +E R+ F+ N +I A M + D+++ + R
Sbjct: 17 YFQSLMKDT--DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 74
Query: 187 DLDGDGLIQHKELQHVMRA 205
D+DGDG + ++E +M A
Sbjct: 75 DIDGDGQVNYEEFVQMMTA 93
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 38.5 bits (88), Expect = 0.016, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
+++I+ FRV+D DG+G I EL+HV G + ++E++D +AD +
Sbjct: 83 EEEIREAFRVFDKDGNGYISAAELRHVXTNL----GEKLTDEEVDQ----XIREADIDGD 134
Query: 236 GAITYESL 243
G + YE
Sbjct: 135 GQVNYEEF 142
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 38.5 bits (88), Expect = 0.017, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
+++I+ FRV+D DG+G I EL+HV G + ++E++D +AD +
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVXTNL----GEKLTDEEVDE----XIREADIDGD 133
Query: 236 GAITYESL 243
G + YE
Sbjct: 134 GQVNYEEF 141
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 38.5 bits (88), Expect = 0.017, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 167 MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMAL 226
M G+S ++++ FR++D + DG I +EL ++RA G EE I+ L
Sbjct: 1 MEDAKGKS-EEELANCFRIFDKNADGFIDIEELGEILRA----TGEHVIEEDIED----L 51
Query: 227 FEDADSENRGAITYESLKNQLE 248
+D+D N G I ++ +E
Sbjct: 52 MKDSDKNNDGRIDFDEFLKMME 73
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 38.5 bits (88), Expect = 0.018, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
+++I+ FRV+D DG+G I EL+HV G + ++E++D +AD +
Sbjct: 82 EEEIREAFRVFDKDGNGYISAAELRHVXTNL----GEKLTDEEVDE----XIREADIDGD 133
Query: 236 GAITYESL 243
G + YE
Sbjct: 134 GQVNYEEF 141
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 38.1 bits (87), Expect = 0.019, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 158 ITKNEFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSE 216
I +EF+ M + ++++K F+V+D D +G I EL+HVM + E
Sbjct: 63 IEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVM--------INLGE 114
Query: 217 EQIDHLTMALFEDADSENRGAITYESL 243
+ D + ++AD + G + YE
Sbjct: 115 KLTDEEVEQMIKEADLDGDGQVNYEEF 141
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 38.1 bits (87), Expect = 0.022, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQID 220
EF M Q +++++ F+++D DGDG I EL+ VM G + ++E+ID
Sbjct: 67 EFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINL----GEKVTDEEID 122
Query: 221 HLTMALFEDADSENRGAITYESL 243
+ +AD + G I YE
Sbjct: 123 E----MIREADFDGDGMINYEEF 141
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 37.7 bits (86), Expect = 0.028, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Query: 177 DKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRG 236
+ ++ FR +D DGDG I EL+ M G +E++D A+ +AD + G
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGL----GQPLPQEELD----AMIREADVDQDG 57
Query: 237 AITYESLKNQLEK 249
+ YE L +
Sbjct: 58 RVNYEEFARMLAQ 70
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 37.7 bits (86), Expect = 0.030, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 152 DFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG 211
DF + L+ + +M + ++++ LFR++D + DG I +EL+ +++A G
Sbjct: 73 DFDEFLVM---MVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQA----TG 125
Query: 212 MQFSEEQIDHLTMALFEDADSENRGAITYESL 243
+E+ I+ L +D D N G I Y+
Sbjct: 126 ETITEDDIEE----LMKDGDKNNDGRIDYDEF 153
Score = 29.3 bits (64), Expect = 9.7, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 172 GQSPD-DKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDA 230
GQ+P ++++ + D DG G + E +M M+++ +EE++ L ++A
Sbjct: 49 GQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNA 108
Query: 231 DSENRGAITYESLKNQLEKHG 251
D G I E LK L+ G
Sbjct: 109 D----GYIDLEELKIMLQATG 125
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 37.7 bits (86), Expect = 0.031, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 152 DFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG 211
DF + L+ + +M + ++++ LFR++D + DG I +EL+ +++A G
Sbjct: 73 DFDEFLVM---MVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQA----TG 125
Query: 212 MQFSEEQIDHLTMALFEDADSENRGAITYESL 243
+E+ I+ L +D D N G I Y+
Sbjct: 126 ETITEDDIEE----LMKDGDKNNDGRIDYDEF 153
Score = 30.4 bits (67), Expect = 4.8, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 172 GQSPD-DKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDA 230
GQ+P ++++ + D DG G + E +M M+++ SEE++ L ++A
Sbjct: 49 GQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNA 108
Query: 231 DSENRGAITYESLKNQLEKHG 251
D G I E LK L+ G
Sbjct: 109 D----GYIDLEELKIMLQATG 125
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 37.4 bits (85), Expect = 0.040, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 152 DFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG 211
DF + L+ + M + ++++ LFR++D + DG I +EL+ +++A G
Sbjct: 73 DFDEFLVM---MVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQA----TG 125
Query: 212 MQFSEEQIDHLTMALFEDADSENRGAITYESL 243
+E+ I+ L +D D N G I Y+
Sbjct: 126 ETITEDDIEE----LMKDGDKNNDGRIDYDEF 153
Score = 33.5 bits (75), Expect = 0.55, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 172 GQSPD-DKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDA 230
GQ+P ++++ + D DG G + E +M CM+++ +EE++ L ++A
Sbjct: 49 GQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNA 108
Query: 231 DSENRGAITYESLKNQLEKHG 251
D G I E LK L+ G
Sbjct: 109 D----GYIDLEELKIMLQATG 125
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 162 EFIDAMHQFAG-QSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG--MQFSEEQ 218
+F+D + F+ +PD K + FR++D D DG + ++L ++ C+ G + S +
Sbjct: 82 DFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVN-CLTGEGEDTRLSASE 140
Query: 219 IDHLTMALFEDADSENRGAITYESLKNQLEKHGGLLENLSISI 261
+ L + E++D + G I ++ + + + I +
Sbjct: 141 MKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSFKIVL 183
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 37.0 bits (84), Expect = 0.048, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
++++K F+V+D D +G I EL+HVM + E+ D + ++AD +
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVM--------INLGEKLTDEEVEQMIKEADLDGD 54
Query: 236 GAITYESL 243
G + YE
Sbjct: 55 GQVNYEEF 62
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 37.0 bits (84), Expect = 0.048, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 152 DFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG 211
DF + L+ + +M + ++++ LFR++D + DG I EL+ +++A G
Sbjct: 73 DFDEFLVM---MVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQA----TG 125
Query: 212 MQFSEEQIDHLTMALFEDADSENRGAITYE 241
+E+ I+ L +D D N G I Y+
Sbjct: 126 ETITEDDIEE----LMKDGDKNNDGRIDYD 151
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 37.0 bits (84), Expect = 0.050, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 152 DFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG 211
DF + L+ + +M + ++++ LFR++D + DG I EL+ +++A G
Sbjct: 73 DFDEFLVM---MVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQA----TG 125
Query: 212 MQFSEEQIDHLTMALFEDADSENRGAITYE 241
+E+ I+ L +D D N G I Y+
Sbjct: 126 ETITEDDIEE----LMKDGDKNNDGRIDYD 151
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 36.6 bits (83), Expect = 0.059, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 152 DFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG 211
DF + L+ + +M + ++++ LFR++D + DG I EL+ +++A G
Sbjct: 73 DFDEFLVM---MVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQA----TG 125
Query: 212 MQFSEEQIDHLTMALFEDADSENRGAITYESL 243
+E+ I+ L +D D N G I Y+
Sbjct: 126 ETITEDDIEE----LMKDGDKNNDGRIDYDEF 153
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 162 EFIDAMHQFAG-QSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG--MQFSEEQ 218
+F+D + F+ +PD K + FR++D D DG + ++L ++ C+ G + S +
Sbjct: 113 DFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVN-CLTGEGEDTRLSASE 171
Query: 219 IDHLTMALFEDADSENRGAITYESLKNQLEK 249
+ L + E++D + G I ++ + +
Sbjct: 172 MKQLIDNILEESDIDRDGTINLSEFQHVISR 202
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 36.2 bits (82), Expect = 0.074, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
++++K F+V+D D +G I EL+HVM + E+ D + ++AD +
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHVM--------INLGEKLTDEEVEQMIKEADLDGD 59
Query: 236 GAITYESL 243
G + YE
Sbjct: 60 GQVNYEEF 67
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 158 ITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRAC--MEENGMQFS 215
I EFI A+ + + K+K+ F +YDLDG+G I E+ +++A M + M+
Sbjct: 80 IDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMP 139
Query: 216 EEQI--DHLTMALFEDADSENRGAITYESL 243
E++ + T +F D+ G ++ E
Sbjct: 140 EDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 35.8 bits (81), Expect = 0.099, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DG G I KEL VMR G ++E++D A+ E+ D + G
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRML----GQNPTKEELD----AIIEEVDEDGSGT 61
Query: 238 ITYESL 243
I +E
Sbjct: 62 IDFEEF 67
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 35.8 bits (81), Expect = 0.099, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DG G I KEL VMR G ++E++D A+ E+ D + G
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRML----GQNPTKEELD----AIIEEVDEDGSGT 72
Query: 238 ITYESL 243
I +E
Sbjct: 73 IDFEEF 78
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 35.8 bits (81), Expect = 0.10, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 33/133 (24%)
Query: 124 SGFDKGNLEWLEQLFRQTVGDEKE---ICRDDFKKI------LITKNEFIDAM------- 167
S FD+ +E ++ F TV D+ I +DD ++ L KNE +DAM
Sbjct: 17 SMFDETEIEDFKEAF--TVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGP 74
Query: 168 -----------HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSE 216
+ G P+D I F+V D DG G I+ L+ ++ G +F+
Sbjct: 75 INFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTT----GGGRFTP 130
Query: 217 EQIDHLTMALFED 229
E+I ++ A D
Sbjct: 131 EEIKNMWAAFPPD 143
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 35.8 bits (81), Expect = 0.11, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
++++ LFR++D + DG I +EL+ +++A G +E+ I+ L +D D N
Sbjct: 14 EEELSDLFRMFDKNADGYIDLEELKIMLQA----TGETITEDDIEE----LMKDGDKNND 65
Query: 236 GAITYESL 243
G I Y+
Sbjct: 66 GRIDYDEF 73
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 35.4 bits (80), Expect = 0.12, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
++++ LFR++D + DG I +EL+ +++A G +E+ I+ L +D D N
Sbjct: 6 EEELSDLFRMFDKNADGYIDLEELKIMLQA----TGETITEDDIEE----LMKDGDKNND 57
Query: 236 GAITYESL 243
G I Y+
Sbjct: 58 GRIDYDEF 65
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 35.4 bits (80), Expect = 0.13, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 162 EFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVM 203
EF+ M + +++I+ FRV+D DG+G I EL+HVM
Sbjct: 22 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 64
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 35.4 bits (80), Expect = 0.13, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 144 DEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVM 203
DE + R DF+ L + A+ + GQ + FRV+D +G+G + EL+HV+
Sbjct: 58 DELKSRRVDFETFL----PMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVL 113
Query: 204 RACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESL 243
G + +EE+++ + +A ED++ G I YE+
Sbjct: 114 TTL----GEKMTEEEVETV-LAGHEDSN----GCINYEAF 144
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 35.4 bits (80), Expect = 0.13, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
++++ LFR++D + DG I +EL+ +++A G +E+ I+ L +D D N
Sbjct: 9 EEELSDLFRMFDKNADGYIDLEELKIMLQA----TGETITEDDIEE----LMKDGDKNND 60
Query: 236 GAITYESL 243
G I Y+
Sbjct: 61 GRIDYDEF 68
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 35.4 bits (80), Expect = 0.13, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
++++ LFR++D + DG I +EL+ +++A G +E+ I+ L +D D N
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEELKIMLQA----TGETITEDDIEE----LMKDGDKNND 55
Query: 236 GAITYESL 243
G I Y+
Sbjct: 56 GRIDYDEF 63
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 35.4 bits (80), Expect = 0.13, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 177 DKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQ----FSEEQIDHLTMALFEDADS 232
+K+K+ F +YD++ DG I +E+ +M++ + G E+ FE D
Sbjct: 9 EKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDR 68
Query: 233 ENRGAITYESLKNQLEKHGGLLENLSI 259
G +T E +K ++ ++ +
Sbjct: 69 NQDGVVTIEEFLEACQKDENIMSSMQL 95
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
+++I+ FRV+ DG+G I +L+HVM G + ++E++D + D D
Sbjct: 383 EEEIREAFRVFGKDGNGYISAAQLRHVMTNL----GEKLTDEEVDEMIREAGIDGD---- 434
Query: 236 GAITYE 241
G + YE
Sbjct: 435 GQVNYE 440
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 35.4 bits (80), Expect = 0.14, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 33/131 (25%)
Query: 126 FDKGNLEWLEQLFRQTVGDEKE---ICRDDFKKI------LITKNEFIDAM--------- 167
FD+ +E ++ F TV D+ I +DD ++ L KNE +DAM
Sbjct: 1 FDETEIEDFKEAF--TVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPIN 58
Query: 168 ---------HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQ 218
+ G P+D I F+V D DG G I+ L+ ++ G +F+ E+
Sbjct: 59 FTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTT----GGGRFTPEE 114
Query: 219 IDHLTMALFED 229
I ++ A D
Sbjct: 115 IKNMWAAFPPD 125
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 35.0 bits (79), Expect = 0.16, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 152 DFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG 211
DF + L+ + +M + ++++ LFR+ D + DG I EL+ +++A G
Sbjct: 73 DFDEFLVM---MVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQA----TG 125
Query: 212 MQFSEEQIDHLTMALFEDADSENRGAITYESL 243
+E+ I+ L +D D N G I Y+
Sbjct: 126 ETITEDDIEE----LMKDGDKNNDGRIDYDEF 153
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 35.0 bits (79), Expect = 0.16, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235
++++ LFR++D + DG I EL+ +++A G +E+ I+ L +D D N
Sbjct: 5 EEELSDLFRMFDKNADGYIDLDELKIMLQA----TGETITEDDIEE----LMKDGDKNND 56
Query: 236 GAITYESL 243
G I Y+
Sbjct: 57 GRIDYDEF 64
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 35.0 bits (79), Expect = 0.20, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 15/89 (16%)
Query: 158 ITKNEFIDAMHQFAGQS-PDDKI--KFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQF 214
I +NEF GQ DDKI K L+++ D+DGDG + +E+ + ++G++
Sbjct: 53 IDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFK----KHGIEK 108
Query: 215 SEEQIDHLTMALFEDADSENRGAITYESL 243
EQ+ AD+ G IT E
Sbjct: 109 VAEQV--------MKADANGDGYITLEEF 129
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 35.0 bits (79), Expect = 0.20, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 15/89 (16%)
Query: 158 ITKNEFIDAMHQFAGQS-PDDKI--KFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQF 214
I +NEF GQ DDKI K L+++ D+DGDG + +E+ + ++G++
Sbjct: 53 IDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFK----KHGIEK 108
Query: 215 SEEQIDHLTMALFEDADSENRGAITYESL 243
EQ+ AD+ G IT E
Sbjct: 109 VAEQV--------MKADANGDGYITLEEF 129
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 162 EFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDH 221
E++ A+H + + K+++ F +YD+DG+G I E+ ++ A + S E H
Sbjct: 84 EYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFK----MISPEDTKH 139
Query: 222 L 222
L
Sbjct: 140 L 140
>pdb|3VLH|A Chain A, Crystal Structure Analysis Of The Arg409leu Variants Of
Katg From Haloarcula Marismortui
pdb|3VLH|B Chain B, Crystal Structure Analysis Of The Arg409leu Variants Of
Katg From Haloarcula Marismortui
pdb|3VLI|A Chain A, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Katg From Haloarcula Marismortui
pdb|3VLI|B Chain B, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Katg From Haloarcula Marismortui
pdb|3VLJ|A Chain A, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Complexes With O-Dianisidine In Katg From
Haloarcula Marismortui
pdb|3VLJ|B Chain B, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Complexes With O-Dianisidine In Katg From
Haloarcula Marismortui
Length = 737
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 11 RPRSGFD----KGNLEWLEQLFRQTVGDEKEI-CRDDFKKILITKNISDLYD-KVHSFVW 64
RP+S D K NLE L+Q R E + ++F+K+ + SDL + S W
Sbjct: 19 RPKSNQDWWPSKLNLEILDQNARDVGPVEDDFDYAEEFQKLDLEAVKSDLEELMTSSQDW 78
Query: 65 YSSQYGHFTPCYV----HTNGFYR 84
+ + YGH+ P ++ H+ G YR
Sbjct: 79 WPADYGHYGPLFIRMAWHSAGTYR 102
>pdb|3VLM|A Chain A, Crystal Structure Analysis Of The Met244ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLM|B Chain B, Crystal Structure Analysis Of The Met244ala Variant Of
Katg From Haloarcula Marismortui
Length = 737
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 11 RPRSGFD----KGNLEWLEQLFRQTVGDEKEI-CRDDFKKILITKNISDLYD-KVHSFVW 64
RP+S D K NLE L+Q R E + ++F+K+ + SDL + S W
Sbjct: 19 RPKSNQDWWPSKLNLEILDQNARDVGPVEDDFDYAEEFQKLDLEAVKSDLEELMTSSQDW 78
Query: 65 YSSQYGHFTPCYV----HTNGFYR 84
+ + YGH+ P ++ H+ G YR
Sbjct: 79 WPADYGHYGPLFIRMAWHSAGTYR 102
>pdb|3VLK|A Chain A, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLK|B Chain B, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLL|A Chain A, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui Complexes With
Inhibitor Sha
pdb|3VLL|B Chain B, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui Complexes With
Inhibitor Sha
Length = 737
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 11 RPRSGFD----KGNLEWLEQLFRQTVGDEKEI-CRDDFKKILITKNISDLYD-KVHSFVW 64
RP+S D K NLE L+Q R E + ++F+K+ + SDL + S W
Sbjct: 19 RPKSNQDWWPSKLNLEILDQNARDVGPVEDDFDYAEEFQKLDLEAVKSDLEELMTSSQDW 78
Query: 65 YSSQYGHFTPCYV----HTNGFYR 84
+ + YGH+ P ++ H+ G YR
Sbjct: 79 WPADYGHYGPLFIRMAWHSAGTYR 102
>pdb|3UW8|A Chain A, Crystal Structure Analysis Of The Ser305thr Variants Of
Katg From Haloarcula Marismortui
pdb|3UW8|B Chain B, Crystal Structure Analysis Of The Ser305thr Variants Of
Katg From Haloarcula Marismortui
Length = 737
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 11 RPRSGFD----KGNLEWLEQLFRQTVGDEKEI-CRDDFKKILITKNISDLYD-KVHSFVW 64
RP+S D K NLE L+Q R E + ++F+K+ + SDL + S W
Sbjct: 19 RPKSNQDWWPSKLNLEILDQNARDVGPVEDDFDYAEEFQKLDLEAVKSDLEELMTSSQDW 78
Query: 65 YSSQYGHFTPCYV----HTNGFYR 84
+ + YGH+ P ++ H+ G YR
Sbjct: 79 WPADYGHYGPLFIRMAWHSAGTYR 102
>pdb|1ITK|A Chain A, Crystal Structure Of Catalase-peroxidase From Haloarcula
Marismortui
pdb|1ITK|B Chain B, Crystal Structure Of Catalase-peroxidase From Haloarcula
Marismortui
Length = 731
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 11 RPRSGFD----KGNLEWLEQLFRQTVGDEKEI-CRDDFKKILITKNISDLYD-KVHSFVW 64
RP+S D K NLE L+Q R E + ++F+K+ + SDL + S W
Sbjct: 19 RPKSNQDWWPSKLNLEILDQNARDVGPVEDDFDYAEEFQKLDLEAVKSDLEELMTSSQDW 78
Query: 65 YSSQYGHFTPCYV----HTNGFYR 84
+ + YGH+ P ++ H+ G YR
Sbjct: 79 WPADYGHYGPLFIRMAWHSAGTYR 102
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 162 EFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDH 221
E++ A+H + + K+++ F +YD+DG+G I E+ ++ A + S E H
Sbjct: 84 EYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFK----MISPEDTKH 139
Query: 222 L 222
L
Sbjct: 140 L 140
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 162 EFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDH 221
E++ A+H + + K+++ F +YD+DG+G I E+ ++ A + S E H
Sbjct: 85 EYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFK----MISPEDTKH 140
Query: 222 L 222
L
Sbjct: 141 L 141
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 162 EFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDH 221
E++ A+H + + K+++ F +YD+DG+G I E+ ++ A + S E H
Sbjct: 84 EYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFK----MISPEDTKH 139
Query: 222 L 222
L
Sbjct: 140 L 140
>pdb|3A4U|B Chain B, Crystal Structure Of Mcfd2 In Complex With Carbohydrate
Recognition Domain Of Ergic-53
Length = 143
Score = 34.7 bits (78), Expect = 0.25, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 171 AGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQ----FSEEQIDHLTMAL 226
A SP + F+++D DG+ L+ EL + +E G + SE+++ ++ +
Sbjct: 62 AEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGV 121
Query: 227 FEDADSENRGAITYESLKNQLE 248
D D N G I Y L+
Sbjct: 122 LRDDDKNNDGYIDYAEFAKSLQ 143
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 34.7 bits (78), Expect = 0.26, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 171 AGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQ----FSEEQIDHLTMAL 226
A SP + F+++D DG+ L+ EL + +E G + SE+++ ++ +
Sbjct: 12 AEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGV 71
Query: 227 FEDADSENRGAITYESLKNQLE 248
D D N G I Y L+
Sbjct: 72 LRDDDKNNDGYIDYAEFAKSLQ 93
>pdb|2VRG|A Chain A, Structure Of Human Mcfd2
Length = 124
Score = 34.3 bits (77), Expect = 0.28, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 171 AGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQ----FSEEQIDHLTMAL 226
A SP + F+++D DG+ L+ EL + +E G + SE+++ ++ +
Sbjct: 43 AEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGV 102
Query: 227 FEDADSENRGAITYESLKNQLE 248
D D N G I Y L+
Sbjct: 103 LRDDDKNNDGYIDYAEFAKSLQ 124
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 33.9 bits (76), Expect = 0.37, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 158 ITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGM----Q 213
++ +FI + + +K+ + F +YD++ DG I +E+ +M+A + G
Sbjct: 119 VSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPV 178
Query: 214 FSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHGGLLENLSI 259
E+ F+ D G +T + +K ++ ++ +
Sbjct: 179 LKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQL 224
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 33.9 bits (76), Expect = 0.43, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 158 ITKNEFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSE 216
I +EF+ M Q + ++ F+V+D +GDGLI EL+HV+ + G + ++
Sbjct: 64 IEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI----GEKLTD 119
Query: 217 EQIDHL 222
++D +
Sbjct: 120 AEVDEM 125
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 33.9 bits (76), Expect = 0.43, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+I+ F ++D DG G I KEL+ MRA G + +E+I + D D + G
Sbjct: 9 EIREAFDLFDTDGSGTIDAKELKVAMRAL----GFEPKKEEIK----KMIADIDKDGSGT 60
Query: 238 ITYESL 243
I +E
Sbjct: 61 IDFEEF 66
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 33.9 bits (76), Expect = 0.45, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 158 ITKNEFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSE 216
I +EF+ M Q + ++ F+V+D +GDGLI EL+HV+ + G + ++
Sbjct: 64 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI----GEKLTD 119
Query: 217 EQIDHL 222
++D +
Sbjct: 120 AEVDDM 125
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 158 ITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG----MQ 213
I EFI A+ + +DK+ + F++YDLD +GLI + E+ ++ A + G +
Sbjct: 80 IDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLP 139
Query: 214 FSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHGGLLENLSI 259
E+ + +F D G +T E ++ ++ LS+
Sbjct: 140 EDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPTIVSALSL 185
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 11/71 (15%)
Query: 152 DFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG 211
DFK+ +I A+H + + K+++ F +YD+DG+G I E+ ++ A +
Sbjct: 81 DFKQYVI-------ALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFK--- 130
Query: 212 MQFSEEQIDHL 222
S E HL
Sbjct: 131 -MISPEDTKHL 140
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 33.5 bits (75), Expect = 0.48, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYES 242
F+ +D +G G I EL+HV+ A G + S+E +D + D + G + YE
Sbjct: 88 FKTFDREGQGFISGAELRHVLTAL----GERLSDEDVDEIIK--LTDLQEDLEGNVKYED 141
Query: 243 L 243
Sbjct: 142 F 142
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 33.5 bits (75), Expect = 0.48, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYES 242
F+ +D +G G I EL+HV+ A G + S+E +D + D + G + YE
Sbjct: 87 FKTFDREGQGFISGAELRHVLTAL----GERLSDEDVDEIIK--LTDLQEDLEGNVKYED 140
Query: 243 L 243
Sbjct: 141 F 141
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 33.5 bits (75), Expect = 0.48, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYES 242
F+ +D +G G I EL+HV+ A G + S+E +D + D + G + YE
Sbjct: 87 FKTFDREGQGFISGAELRHVLTAL----GERLSDEDVDEIIK--LTDLQEDLEGNVKYED 140
Query: 243 L 243
Sbjct: 141 F 141
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 33.5 bits (75), Expect = 0.48, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYES 242
F+ +D +G G I EL+HV+ A G + S+E +D + D + G + YE
Sbjct: 90 FKTFDREGQGFISGAELRHVLTAL----GERLSDEDVDEIIK--LTDLQEDLEGNVKYED 143
Query: 243 L 243
Sbjct: 144 F 144
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 33.5 bits (75), Expect = 0.48, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYES 242
F+ +D +G G I EL+HV+ A G + S+E +D + D + G + YE
Sbjct: 90 FKTFDREGQGFISGAELRHVLTAL----GERLSDEDVDEIIK--LTDLQEDLEGNVKYED 143
Query: 243 L 243
Sbjct: 144 F 144
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 33.5 bits (75), Expect = 0.48, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYES 242
F+ +D +G G I EL+HV+ A G + S+E +D + D + G + YE
Sbjct: 90 FKTFDREGQGFISGAELRHVLTAL----GERLSDEDVDEIIK--LTDLQEDLEGNVKYED 143
Query: 243 L 243
Sbjct: 144 F 144
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 33.5 bits (75), Expect = 0.50, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F +YD DGDG I KEL VMR+ G+ +E ++ + + D++ G
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSL----GLNPTEAELQD----MINEVDADGNGT 62
Query: 238 ITY 240
I +
Sbjct: 63 IDF 65
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 33.5 bits (75), Expect = 0.50, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 158 ITKNEFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSE 216
I +EF+ M Q + ++ F+V+D +GDGLI EL+HV+ + G + ++
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI----GEKLTD 118
Query: 217 EQIDHL 222
++D +
Sbjct: 119 AEVDDM 124
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 11/71 (15%)
Query: 152 DFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG 211
DFK+ +I A+H + + K+++ F +YD+DG+G I E+ ++ A +
Sbjct: 81 DFKQYVI-------ALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFK--- 130
Query: 212 MQFSEEQIDHL 222
S E HL
Sbjct: 131 -MISPEDTKHL 140
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 33.5 bits (75), Expect = 0.53, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DG G I K L VMR G ++E++D A+ E+ D + G
Sbjct: 21 EFKAAFDMFDADGGGDISTKALGTVMRML----GQNPTKEELD----AIIEEVDEDGSGT 72
Query: 238 ITYESL 243
I +E
Sbjct: 73 IDFEEF 78
>pdb|1WF6|A Chain A, The Third Brca1 C-Terminus (Brct) Domain Of Similar To
S.Pombe Rad4+CUT5+ PRODUCT
Length = 132
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 477 GFWRVMQPDDSVTHVVLGAFTPTFHKLYACLSSKPHVVTVEWL 519
G R Q ++ VTHV++G + + + + +PHVV +WL
Sbjct: 67 GGVRFNQLNEDVTHVIVGDYDDELKQFWNKSAHRPHVVGAKWL 109
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 33.5 bits (75), Expect = 0.58, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 26/44 (59%)
Query: 162 EFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRA 205
E++ A+H + K+++ F +YD+DG+G I E+ ++ A
Sbjct: 92 EYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVXA 135
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 33.1 bits (74), Expect = 0.68, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 9/61 (14%)
Query: 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYES 242
RV+D +G+G + E++HV+ G + +EE+++ L +A ED++ G I YE
Sbjct: 92 LRVFDKEGNGTVMGAEIRHVLVTL----GEKMTEEEVEQL-VAGHEDSN----GCINYEE 142
Query: 243 L 243
L
Sbjct: 143 L 143
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 33.1 bits (74), Expect = 0.74, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 171 AGQSPDDKI---KFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALF 227
A Q D++I K F ++D DGDG I KEL VMR+ G +E ++ +
Sbjct: 1 ADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSL----GQNPTEAELQD----MI 52
Query: 228 EDADSENRGAITYESLKNQLEK 249
+ D++ G I + N + +
Sbjct: 53 NEVDADGNGTIDFPEFLNLMAR 74
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 33.1 bits (74), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 29/142 (20%)
Query: 108 AYTSLRIHHNLVCLPRSG-FDKGNLE-WLEQLFRQTVGDEKEICRDDFKKILITKNEFID 165
A TS +L CL +S FD+ ++ W + R ++ R+DF KI +F
Sbjct: 3 AKTSKLSKDDLTCLKQSTYFDRREIQQWHKGFLRDCPS--GQLAREDFVKIY---KQF-- 55
Query: 166 AMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVM----RACMEENGMQFSEEQIDH 221
F SP+D LF V+D D +G I +E V+ R +EE
Sbjct: 56 ----FPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEK----------- 100
Query: 222 LTMALFEDADSENRGAITYESL 243
L+ A FE D + G IT++ +
Sbjct: 101 LSWA-FELYDLNHDGYITFDEM 121
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 33.1 bits (74), Expect = 0.76, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 158 ITKNEFIDAM-HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEE 209
I +EF+ M Q + ++ F+V+D +GDGLI EL+HV+ + E+
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK 115
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 33.1 bits (74), Expect = 0.76, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 9/61 (14%)
Query: 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYES 242
RV+D +G+G + E++HV+ G + +EE+++ L +A ED++ G I YE
Sbjct: 90 LRVFDKEGNGTVMGAEIRHVLVTL----GEKMTEEEVEQL-VAGHEDSN----GCINYEE 140
Query: 243 L 243
L
Sbjct: 141 L 141
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 32.7 bits (73), Expect = 0.80, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query: 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYES 242
FR +D +GDG I EL+ MRA + G Q I+ + D D G + +E
Sbjct: 94 FREFDTNGDGEISTSELREAMRALL---GHQVGHRDIEE----IIRDVDLNGDGRVDFEE 146
Query: 243 LKNQLEK 249
+ +
Sbjct: 147 FVRMMSR 153
>pdb|3L40|A Chain A, Crystal Structure Of S. Pombe Brc1 Brct5-Brct6 Domains
pdb|3L40|B Chain B, Crystal Structure Of S. Pombe Brc1 Brct5-Brct6 Domains
pdb|3L41|A Chain A, Crystal Structure Of S. Pombe Brc1 Brct5-Brct6 Domains In
Complex With Phosphorylated H2a
Length = 220
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 544 NNKKASTHLVCP-TCSGSKYNAALKWGFPSVNKKWLLECARTGKRVSEQQYLTGSDEASQ 602
+N THL+ P SK+ ++ +G V W+ C +T + V E+ YL E
Sbjct: 34 SNPSKCTHLIAPRILRTSKFLCSIPYGPCVVTMDWINSCLKTHEIVDEEPYLLNDPEKEL 93
Query: 603 NVG 605
+G
Sbjct: 94 ELG 96
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 32.7 bits (73), Expect = 0.84, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYES 242
F+ +D +G G I EL+HV+ G + S+E++D + D + G + YE
Sbjct: 90 FKTFDREGQGFISGAELRHVLSGL----GERLSDEEVDEIIN--LTDLQEDLEGNVKYEE 143
Query: 243 L 243
Sbjct: 144 F 144
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 32.7 bits (73), Expect = 0.84, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYES 242
F+ +D +G G I EL+HV+ G + S+E++D + D + G + YE
Sbjct: 91 FKTFDREGQGFISGAELRHVLSGL----GERLSDEEVDEIIN--LTDLQEDLEGNVKYEE 144
Query: 243 L 243
Sbjct: 145 F 145
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 32.7 bits (73), Expect = 0.88, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 173 QSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADS 232
Q +++I F+V+D +GDG+I E + +M+ EE ++ +++ ++AD
Sbjct: 4 QDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEE---PLTDAEVEE----AMKEADE 56
Query: 233 ENRGAITYESLKNQLEKHGGLLE 255
+ G I + ++K L+
Sbjct: 57 DGNGVIDIPEFMDLIKKSKNALK 79
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 32.7 bits (73), Expect = 0.89, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 162 EFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQ----FSEE 217
+F+ A+ + +K+++ F +YD++ DG I +E+ +++A + G E+
Sbjct: 77 DFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKED 136
Query: 218 QIDHLTMALFEDADSENRGAITYESLKNQLEKHGGLLENLSI 259
F+ D G +T + ++ ++ +L +
Sbjct: 137 TPRQHVDVFFQKMDKNKDGIVTLDEFLESXQEDDNIMRSLQL 178
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 32.7 bits (73), Expect = 0.89, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYES 242
F+ +D +G G I EL+HV+ G + S+E++D + D + G + YE
Sbjct: 90 FKTFDREGQGFISGAELRHVLSGL----GERLSDEEVDEIIN--LTDLQEDLEGNVKYEE 143
Query: 243 L 243
Sbjct: 144 F 144
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 32.7 bits (73), Expect = 0.91, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 169 QFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFE 228
+ +G P+D ++ F ++D DG G I L+ + +E G FS+E+I + +++
Sbjct: 77 KVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDL----LENMGDNFSKEEIKN----VWK 128
Query: 229 DADSENR 235
DA +N+
Sbjct: 129 DAPLKNK 135
>pdb|2W3Z|A Chain A, Structure Of A Streptococcus Mutans Ce4 Esterase
Length = 311
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 632 SRLNGARSDAKPN-EPDRLDTKENHTSSRKNPEFESASQGSQLSGKSASKKRKLCLLNNG 690
SR++ ++ KPN P+ L NH + + + + + ++ K AS K+KL L
Sbjct: 55 SRISKKKTTPKPNINPNALKIGSNHNNQAEGYAYSAETVRQMMNNKQASAKQKLVFLTFD 114
Query: 691 DG 692
DG
Sbjct: 115 DG 116
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 32.7 bits (73), Expect = 0.93, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYES 242
FR+YD +G+G I VMR + E S E +D A+ ++ D++ G + +E
Sbjct: 9 FRLYDKEGNGYIS----TDVMREILAELDETLSSEDLD----AMIDEIDADGSGTVDFEE 60
Query: 243 L 243
Sbjct: 61 F 61
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 32.7 bits (73), Expect = 0.96, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+I+ F ++D DG G I KEL+ MRA G + +E+I + + D + G
Sbjct: 31 EIREAFDLFDTDGSGTIDAKELKVAMRAL----GFEPKKEEIK----KMISEIDKDGSGT 82
Query: 238 ITYESL 243
I +E
Sbjct: 83 IDFEEF 88
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 32.7 bits (73), Expect = 0.98, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 37/92 (40%), Gaps = 10/92 (10%)
Query: 158 ITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEE 217
I EFI A +D + F +D DG G I ELQ +AC EE G++
Sbjct: 80 IDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQ---QAC-EEFGVE---- 131
Query: 218 QIDHLTMALFEDADSENRGAITYESLKNQLEK 249
D L D D +N G I Y +K
Sbjct: 132 --DVRIEELXRDVDQDNDGRIDYNEFVAXXQK 161
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 32.3 bits (72), Expect = 1.1, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 33/133 (24%)
Query: 124 SGFDKGNLEWLEQLFRQTVGDEKE---ICRDDFKKI------LITKNEFIDAM------- 167
S FD+ ++ ++ F TV D+ I +DD ++ L KNE +DAM
Sbjct: 4 SMFDQTQIQDFKEAF--TVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGP 61
Query: 168 -----------HQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSE 216
+ G P+D I F+V D DG G I+ L+ ++ + +F+
Sbjct: 62 INFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCD----RFTP 117
Query: 217 EQIDHLTMALFED 229
E+I ++ A D
Sbjct: 118 EEIKNMWAAFPPD 130
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYES 242
FR+YD +G+G I VMR + E S E +D A+ ++ D++ G + +E
Sbjct: 97 FRLYDKEGNGYIS----TDVMREILAELDETLSSEDLD----AMIDEIDADGSGTVDFEE 148
Query: 243 L 243
Sbjct: 149 F 149
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+I+ F ++D DG G I KEL+ MRA G + +E+I + + D + G
Sbjct: 29 EIREAFDLFDTDGSGTIDAKELKVAMRAL----GFEPKKEEIK----KMISEIDKDGSGT 80
Query: 238 ITYESL 243
I +E
Sbjct: 81 IDFEEF 86
>pdb|1KZY|C Chain C, Crystal Structure Of The 53bp1 Brct Region Complexed To
Tumor Suppressor P53
pdb|1KZY|D Chain D, Crystal Structure Of The 53bp1 Brct Region Complexed To
Tumor Suppressor P53
Length = 259
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 555 PTCSGSKYNAALKWGFPSVNKKWLLECARTGKRVSEQQY 593
P+C S A P V+++W+++C G+R+ +Q+
Sbjct: 211 PSCPASVLKCAEALQLPVVSQEWVIQCLIVGERIGFKQH 249
>pdb|1GZH|B Chain B, Crystal Structure Of The Brct Domains Of Human 53bp1 Bound
To The P53 Tumor Supressor
pdb|1GZH|D Chain D, Crystal Structure Of The Brct Domains Of Human 53bp1 Bound
To The P53 Tumor Supressor
Length = 249
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 555 PTCSGSKYNAALKWGFPSVNKKWLLECARTGKRVSEQQY 593
P+C S A P V+++W+++C G+R+ +Q+
Sbjct: 201 PSCPASVLKCAEALQLPVVSQEWVIQCLIVGERIGFKQH 239
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 32.0 bits (71), Expect = 1.6, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 213 QFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHGGLL 254
+ SEE+I L LF+ D++N G IT++ LK+ L++ G L
Sbjct: 16 RLSEEEIGGLK-ELFKMIDTDNSGTITFDELKDGLKRVGSEL 56
>pdb|3PD7|A Chain A, Crystal Structure Of The Sixth Brct Domain Of Human Topbp1
pdb|3PD7|B Chain B, Crystal Structure Of The Sixth Brct Domain Of Human Topbp1
Length = 107
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 15/97 (15%)
Query: 500 FHKLYACLSSKPHVVTVEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVC---PT 556
HK+ C+S K ++ + + ++ LGA Y+ F + TH + P
Sbjct: 16 LHKVVVCVSKK---LSKKQSELNGIAASLGADYRRSF---------DETVTHFIYQGRPN 63
Query: 557 CSGSKYNAALKWGFPSVNKKWLLECARTGKRVSEQQY 593
+ +Y + + G V++ WLL+CA+ K + E Y
Sbjct: 64 DTNREYKSVKERGVHIVSEHWLLDCAQECKHLPESLY 100
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/102 (17%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 162 EFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQ----FSEE 217
+F+ A+ + +K+++ F +YD++ DG I +E+ +++A + G +E+
Sbjct: 74 DFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAED 133
Query: 218 QIDHLTMALFEDADSENRGAITYESLKNQLEKHGGLLENLSI 259
F+ D G +T + ++ ++ +L +
Sbjct: 134 TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQL 175
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 31.6 bits (70), Expect = 1.8, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 213 QFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHGGLL 254
+ SEE+I L LF+ D++N G IT++ LK+ L++ G L
Sbjct: 3 RLSEEEIGGLK-ELFKMIDTDNSGTITFDELKDGLKRVGSEL 43
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 31.2 bits (69), Expect = 2.3, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 175 PDDK---IKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDAD 231
P+D+ I+ F+V+D DG+G I +EL MR+ G +E +++ + L D D
Sbjct: 31 PEDELEEIREAFKVFDRDGNGFISKQELGTAMRSL----GYMPNEVELEVIIQRLDMDGD 86
Query: 232 SE 233
+
Sbjct: 87 GQ 88
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 31.2 bits (69), Expect = 2.7, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYES 242
FR +D +GDG I EL+ MR + G Q I+ + D D G + +E
Sbjct: 13 FREFDTNGDGEISTSELREAMRKLL---GHQVGHRDIEE----IIRDVDLNGDGRVDFEE 65
Query: 243 LKNQLEK 249
+ +
Sbjct: 66 FVRMMSR 72
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/102 (17%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 162 EFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQ----FSEE 217
+F+ A+ + +K+++ F +YD++ DG I +E+ +++A + G E+
Sbjct: 110 DFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKED 169
Query: 218 QIDHLTMALFEDADSENRGAITYESLKNQLEKHGGLLENLSI 259
F+ D G +T + ++ ++ +L +
Sbjct: 170 TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQL 211
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 31.2 bits (69), Expect = 2.9, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYES 242
FRV+D+D DG I EL H++ ++ + ++ ++ + + D D N G I +
Sbjct: 128 FRVFDVDNDGEITTAELAHILYNGNKKGNI--TQRDVNRVKR-MIRDVDKNNDGKIDFHE 184
Query: 243 LKNQLE 248
++
Sbjct: 185 FSEMMK 190
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/102 (17%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 162 EFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQ----FSEE 217
+F+ A+ + +K+++ F +YD++ DG I +E+ +++A + G E+
Sbjct: 74 DFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKED 133
Query: 218 QIDHLTMALFEDADSENRGAITYESLKNQLEKHGGLLENLSI 259
F+ D G +T + ++ ++ +L +
Sbjct: 134 TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQL 175
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 30.8 bits (68), Expect = 3.1, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYES 242
F ++D++ DG + + EL+ M+A G + + +I + L ++ DSE R + Y+
Sbjct: 29 FSLFDMNNDGFLDYHELKVAMKAL----GFELPKREI----LDLIDEYDSEGRHLMKYDD 80
Query: 243 L 243
Sbjct: 81 F 81
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/88 (19%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 177 DKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG-----MQFSEEQIDHLTMALFEDAD 231
+K+K+ F +YD++ DG I +E+ +M++ + G + + ++H+ F+ D
Sbjct: 165 EKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVE-RFFQKMD 223
Query: 232 SENRGAITYESLKNQLEKHGGLLENLSI 259
G +T + +K ++ ++ +
Sbjct: 224 RNQDGVVTIDEFLETCQKDENIMNSMQL 251
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 30.8 bits (68), Expect = 3.2, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYES 242
FR +D +GDG I EL+ MR + G Q I+ + D D G + +E
Sbjct: 94 FREFDTNGDGEISTSELREAMRKLL---GHQVGHRDIEE----IIRDVDLNGDGRVDFEE 146
Query: 243 LKNQLEK 249
+ +
Sbjct: 147 FVRMMSR 153
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 30.8 bits (68), Expect = 3.7, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYES 242
FR +D +GDG I EL+ MR + G Q I+ + D D G + +E
Sbjct: 108 FREFDTNGDGEISTSELREAMRKLL---GHQVGHRDIEE----IIRDVDLNGDGRVDFEE 160
Query: 243 LKNQLEK 249
+ +
Sbjct: 161 FVRMMSR 167
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 30.4 bits (67), Expect = 3.9, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 62
Query: 238 ITY 240
I +
Sbjct: 63 IDF 65
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 30.4 bits (67), Expect = 3.9, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 62
Query: 238 ITY 240
I +
Sbjct: 63 IDF 65
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 30.4 bits (67), Expect = 3.9, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 62
Query: 238 ITY 240
I +
Sbjct: 63 IDF 65
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 30.4 bits (67), Expect = 3.9, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 63
Query: 238 ITY 240
I +
Sbjct: 64 IDF 66
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 30.4 bits (67), Expect = 4.1, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 62
Query: 238 ITY 240
I +
Sbjct: 63 IDF 65
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 30.4 bits (67), Expect = 4.1, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 62
Query: 238 ITY 240
I +
Sbjct: 63 IDF 65
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 30.4 bits (67), Expect = 4.1, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 62
Query: 238 ITY 240
I +
Sbjct: 63 IDF 65
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 30.4 bits (67), Expect = 4.4, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGNGT 62
Query: 238 ITY 240
I +
Sbjct: 63 IDF 65
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 30.4 bits (67), Expect = 4.8, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
+ K F ++D DGDG I KEL VMR+ G +E ++ + + D++ G
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSL----GQNPTEAELQD----MINEVDADGDGT 62
Query: 238 ITY 240
I +
Sbjct: 63 IDF 65
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
Query: 162 EFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVM-------RAC-----MEE 209
E++ A++ + + K+K+ F++YD D +G I +EL ++ +AC E+
Sbjct: 80 EYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQ 139
Query: 210 NGMQFS-EEQIDHLTMALFEDADSE 233
G + EE +D + + + E+ D +
Sbjct: 140 QGKLLTPEEVVDRIFLLVDENGDGQ 164
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 30.0 bits (66), Expect = 5.5, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 179 IKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAI 238
++ +F+ D+DG+G I E A E++ S+E++ + DAD + G +
Sbjct: 38 LQLIFKAIDIDGNGEIDLAEFTKFAAAVKEQD---LSDEKVGLKILYKLMDADGD--GKL 92
Query: 239 TYESLKNQLEKHG 251
T E + +K G
Sbjct: 93 TKEEVTTFFKKFG 105
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 30.0 bits (66), Expect = 6.2, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA 237
++K FRV D + G+I+ V+R ++ G + +E++I++ + + D++ G
Sbjct: 8 ELKEAFRVLDKEKKGVIK----VDVLRWILKSLGDELTEDEIEN----MIAETDTDGSGT 59
Query: 238 ITYESLK 244
+ YE K
Sbjct: 60 VDYEEFK 66
>pdb|3JVE|A Chain A, Crystal Structure Of The Sixth Brct Domain Of Topbp1
Length = 109
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 15/97 (15%)
Query: 500 FHKLYACLSSKPHVVTVEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVC---PT 556
HK+ C+S K ++ + + ++ LGA Y+ F + TH + P
Sbjct: 18 LHKVVVCVSKK---LSKKQSELNGIAASLGADYRWSF---------DETVTHFIYQGRPN 65
Query: 557 CSGSKYNAALKWGFPSVNKKWLLECARTGKRVSEQQY 593
+ +Y + + G V++ WLL+CA+ K + E Y
Sbjct: 66 DTNREYKSVKERGVHIVSEHWLLDCAQECKHLPESLY 102
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,941,047
Number of Sequences: 62578
Number of extensions: 1090479
Number of successful extensions: 2511
Number of sequences better than 100.0: 210
Number of HSP's better than 100.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 2132
Number of HSP's gapped (non-prelim): 458
length of query: 864
length of database: 14,973,337
effective HSP length: 107
effective length of query: 757
effective length of database: 8,277,491
effective search space: 6266060687
effective search space used: 6266060687
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)