Query psy8382
Match_columns 864
No_of_seqs 555 out of 2767
Neff 6.5
Searched_HMMs 46136
Date Fri Aug 16 17:13:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8382.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8382hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0039|consensus 100.0 4E-40 8.6E-45 391.6 14.5 395 145-571 2-409 (646)
2 PLN02844 oxidoreductase/ferric 99.9 6.8E-24 1.5E-28 253.0 7.7 236 304-569 110-364 (722)
3 PLN02631 ferric-chelate reduct 99.9 2.1E-23 4.5E-28 247.7 6.0 232 304-567 108-358 (699)
4 PLN02292 ferric-chelate reduct 99.9 1.1E-22 2.4E-27 242.0 5.1 207 331-569 168-377 (702)
5 KOG0034|consensus 99.7 2.1E-16 4.6E-21 160.7 16.0 145 113-260 10-186 (187)
6 COG5126 FRQ1 Ca2+-binding prot 99.7 3.2E-16 7E-21 154.5 14.1 122 123-252 11-159 (160)
7 KOG0044|consensus 99.7 5.6E-16 1.2E-20 157.7 14.2 150 111-261 8-187 (193)
8 KOG0027|consensus 99.6 2.4E-14 5.2E-19 141.7 13.9 130 105-249 18-149 (151)
9 KOG0028|consensus 99.5 3.8E-13 8.3E-18 130.2 13.6 131 101-250 40-171 (172)
10 PTZ00183 centrin; Provisional 99.4 3.4E-12 7.4E-17 125.7 15.3 137 98-252 18-157 (158)
11 PF01794 Ferric_reduct: Ferric 99.3 1.1E-12 2.4E-17 124.6 5.8 117 337-475 2-119 (125)
12 KOG0037|consensus 99.3 1.9E-11 4.1E-16 124.5 13.9 128 105-258 67-197 (221)
13 PTZ00184 calmodulin; Provision 99.3 3.1E-11 6.8E-16 117.3 13.2 126 106-249 22-148 (149)
14 KOG0031|consensus 99.3 4E-11 8.6E-16 115.5 13.3 115 126-248 26-164 (171)
15 KOG0038|consensus 99.3 1.4E-11 3.1E-16 117.1 10.1 114 132-260 74-188 (189)
16 PF13499 EF-hand_7: EF-hand do 99.1 2.6E-10 5.6E-15 96.5 7.9 66 178-247 1-66 (66)
17 KOG0036|consensus 99.0 4.5E-09 9.7E-14 115.5 14.5 139 16-251 8-148 (463)
18 KOG0030|consensus 98.9 8.5E-09 1.8E-13 98.1 11.9 127 105-248 21-150 (152)
19 PF12738 PTCB-BRCT: twin BRCT 98.9 3.3E-10 7.1E-15 95.4 2.0 62 507-577 2-63 (63)
20 cd05022 S-100A13 S-100A13: S-1 98.9 2.7E-09 5.9E-14 96.3 7.2 66 177-250 8-76 (89)
21 PTZ00183 centrin; Provisional 98.9 3.2E-08 7E-13 97.4 13.4 109 124-249 9-118 (158)
22 KOG0027|consensus 98.8 3.1E-08 6.7E-13 98.2 12.9 111 127-251 3-115 (151)
23 PTZ00184 calmodulin; Provision 98.8 7.3E-08 1.6E-12 93.5 13.6 108 125-249 4-112 (149)
24 COG5126 FRQ1 Ca2+-binding prot 98.8 8.3E-08 1.8E-12 95.3 13.5 144 10-205 8-156 (160)
25 cd05027 S-100B S-100B: S-100B 98.8 2.4E-08 5.2E-13 90.1 8.1 69 177-249 8-79 (88)
26 PLN02964 phosphatidylserine de 98.8 5.2E-08 1.1E-12 115.7 13.1 121 109-251 118-245 (644)
27 cd05026 S-100Z S-100Z: S-100Z 98.6 9.9E-08 2.1E-12 87.0 8.4 70 177-250 10-82 (93)
28 cd05031 S-100A10_like S-100A10 98.6 1.3E-07 2.9E-12 86.2 7.8 71 177-251 8-81 (94)
29 cd05025 S-100A1 S-100A1: S-100 98.6 1.9E-07 4.2E-12 84.7 8.5 72 177-252 9-83 (92)
30 cd05029 S-100A6 S-100A6: S-100 98.6 1.6E-07 3.5E-12 84.7 7.7 69 177-250 10-80 (88)
31 KOG4223|consensus 98.5 1.4E-06 2.9E-11 94.1 13.8 206 21-244 76-300 (325)
32 KOG0377|consensus 98.5 6.8E-07 1.5E-11 98.7 11.7 114 132-249 464-615 (631)
33 KOG0028|consensus 98.5 1.3E-06 2.9E-11 85.3 11.7 110 124-250 25-135 (172)
34 cd00052 EH Eps15 homology doma 98.5 3.2E-07 7E-12 77.2 6.4 62 180-251 2-63 (67)
35 smart00027 EH Eps15 homology d 98.4 5.9E-07 1.3E-11 82.2 7.6 64 177-250 10-73 (96)
36 KOG0037|consensus 98.4 1.4E-05 3.1E-10 82.1 18.3 158 22-248 57-219 (221)
37 cd00213 S-100 S-100: S-100 dom 98.4 6E-07 1.3E-11 80.6 7.4 70 177-250 8-80 (88)
38 KOG0034|consensus 98.4 1.6E-06 3.5E-11 88.8 10.8 147 14-205 25-175 (187)
39 cd00252 SPARC_EC SPARC_EC; ext 98.4 8E-07 1.7E-11 84.2 7.0 64 176-251 47-110 (116)
40 cd00051 EFh EF-hand, calcium b 98.3 1.8E-06 3.8E-11 70.0 7.6 61 179-247 2-62 (63)
41 cd05023 S-100A11 S-100A11: S-1 98.3 2E-06 4.2E-11 77.9 8.0 70 177-250 9-81 (89)
42 PF13833 EF-hand_8: EF-hand do 98.3 1.8E-06 3.9E-11 70.2 6.7 52 190-249 1-53 (54)
43 KOG1929|consensus 98.3 1.1E-06 2.4E-11 106.3 6.5 100 503-611 494-593 (811)
44 PF13499 EF-hand_7: EF-hand do 98.2 8.5E-07 1.8E-11 74.9 3.6 65 133-203 1-66 (66)
45 KOG2643|consensus 98.2 1.4E-05 3.1E-10 88.9 11.9 127 105-250 296-454 (489)
46 KOG0044|consensus 98.1 8.9E-06 1.9E-10 83.5 9.6 145 13-205 20-175 (193)
47 PLN02964 phosphatidylserine de 98.1 1.4E-05 2.9E-10 95.6 11.6 79 117-205 161-243 (644)
48 cd05030 calgranulins Calgranul 98.1 9.6E-06 2.1E-10 73.2 7.2 67 177-250 8-80 (88)
49 smart00027 EH Eps15 homology d 98.0 2.2E-05 4.9E-10 71.8 8.8 80 125-216 3-84 (96)
50 PF14658 EF-hand_9: EF-hand do 98.0 1.8E-05 3.9E-10 67.0 7.0 61 181-249 2-64 (66)
51 PF00533 BRCT: BRCA1 C Terminu 98.0 5.9E-06 1.3E-10 71.5 4.1 63 511-582 14-78 (78)
52 cd05022 S-100A13 S-100A13: S-1 97.9 3.7E-05 8E-10 69.6 7.9 67 130-206 6-76 (89)
53 cd00027 BRCT Breast Cancer Sup 97.8 1.6E-05 3.5E-10 66.3 4.1 60 515-583 12-72 (72)
54 KOG0041|consensus 97.8 3.6E-05 7.8E-10 77.8 6.8 65 177-249 99-163 (244)
55 cd05026 S-100Z S-100Z: S-100Z 97.8 0.00014 3.1E-09 66.2 9.1 71 130-206 8-82 (93)
56 PF00036 EF-hand_1: EF hand; 97.7 2.6E-05 5.7E-10 55.6 3.1 28 178-205 1-28 (29)
57 KOG4223|consensus 97.6 0.00026 5.7E-09 76.8 10.4 109 132-251 113-230 (325)
58 KOG0031|consensus 97.6 0.00015 3.3E-09 70.7 7.4 61 177-249 32-92 (171)
59 cd00052 EH Eps15 homology doma 97.6 0.00017 3.6E-09 60.6 6.8 60 135-206 2-62 (67)
60 KOG4251|consensus 97.6 0.00025 5.4E-09 73.7 9.1 74 174-247 233-307 (362)
61 cd00213 S-100 S-100: S-100 dom 97.6 0.00031 6.7E-09 63.0 8.3 73 128-206 4-80 (88)
62 KOG0036|consensus 97.6 0.00057 1.2E-08 76.1 11.7 101 126-249 8-110 (463)
63 cd05023 S-100A11 S-100A11: S-1 97.5 0.00049 1.1E-08 62.4 9.2 73 129-206 6-81 (89)
64 cd05025 S-100A1 S-100A1: S-100 97.5 0.00046 9.9E-09 62.6 9.1 72 130-207 7-82 (92)
65 smart00292 BRCT breast cancer 97.5 0.00011 2.3E-09 62.8 4.6 64 514-585 15-80 (80)
66 KOG3226|consensus 97.5 8E-05 1.7E-09 81.1 4.4 82 509-599 324-405 (508)
67 cd00252 SPARC_EC SPARC_EC; ext 97.5 0.00027 5.9E-09 67.1 7.4 62 128-203 44-106 (116)
68 KOG4666|consensus 97.5 0.00017 3.7E-09 77.7 6.5 108 132-258 259-368 (412)
69 cd00051 EFh EF-hand, calcium b 97.5 0.0003 6.6E-09 56.6 6.7 60 134-203 2-62 (63)
70 cd05027 S-100B S-100B: S-100B 97.5 0.00052 1.1E-08 62.0 8.7 72 130-206 6-80 (88)
71 cd05031 S-100A10_like S-100A10 97.4 0.00068 1.5E-08 61.8 9.0 71 130-206 6-80 (94)
72 PF13833 EF-hand_8: EF-hand do 97.4 0.00037 8E-09 56.5 6.2 52 144-205 1-53 (54)
73 cd05029 S-100A6 S-100A6: S-100 97.4 0.00092 2E-08 60.4 9.2 70 130-206 8-80 (88)
74 KOG2562|consensus 97.4 0.00061 1.3E-08 76.9 9.6 117 126-245 272-420 (493)
75 PF13405 EF-hand_6: EF-hand do 97.4 0.00015 3.3E-09 52.2 3.2 29 178-206 1-30 (31)
76 cd05024 S-100A10 S-100A10: A s 97.4 0.00082 1.8E-08 60.9 8.5 69 177-250 8-77 (91)
77 KOG0030|consensus 97.4 0.00038 8.3E-09 66.9 6.4 68 174-249 8-77 (152)
78 PRK12309 transaldolase/EF-hand 97.3 0.0017 3.7E-08 74.0 11.9 55 174-249 331-385 (391)
79 KOG4065|consensus 97.3 0.001 2.2E-08 61.9 7.6 66 181-246 71-142 (144)
80 KOG0377|consensus 97.2 0.0025 5.4E-08 71.3 11.8 69 132-206 547-616 (631)
81 KOG2643|consensus 97.2 0.002 4.3E-08 72.4 10.9 128 108-248 212-383 (489)
82 PF00036 EF-hand_1: EF hand; 97.2 0.0006 1.3E-08 48.6 4.0 25 225-249 4-28 (29)
83 cd05030 calgranulins Calgranul 97.1 0.0024 5.2E-08 57.6 8.9 71 130-206 6-80 (88)
84 PF12763 EF-hand_4: Cytoskelet 97.0 0.0023 5E-08 59.7 7.5 64 176-250 9-72 (104)
85 KOG0041|consensus 97.0 0.0036 7.7E-08 63.7 8.9 113 120-246 87-200 (244)
86 PF13202 EF-hand_5: EF hand; P 96.9 0.00073 1.6E-08 46.4 2.7 25 179-203 1-25 (25)
87 KOG1929|consensus 96.7 0.0013 2.9E-08 80.2 4.0 84 505-597 106-190 (811)
88 PRK05419 putative sulfite oxid 96.6 0.0041 8.9E-08 65.0 6.6 85 368-472 68-152 (205)
89 PF10591 SPARC_Ca_bdg: Secrete 96.6 0.0012 2.6E-08 62.5 2.2 62 175-246 52-113 (113)
90 KOG4251|consensus 96.5 0.0084 1.8E-07 62.6 8.3 66 131-205 100-168 (362)
91 KOG0751|consensus 96.5 0.046 1E-06 62.3 14.0 95 105-206 84-208 (694)
92 KOG0033|consensus 96.3 0.0012 2.6E-08 69.6 0.8 64 7-78 206-272 (355)
93 PF14788 EF-hand_10: EF hand; 96.2 0.013 2.9E-07 47.2 5.8 48 194-249 2-49 (51)
94 PLN03122 Poly [ADP-ribose] pol 96.2 0.0052 1.1E-07 75.6 5.0 83 506-598 193-280 (815)
95 KOG0040|consensus 96.1 0.017 3.7E-07 72.5 9.1 118 122-249 2243-2361(2399)
96 PRK12309 transaldolase/EF-hand 96.1 0.011 2.4E-07 67.6 6.9 53 131-206 333-386 (391)
97 PF12763 EF-hand_4: Cytoskelet 96.1 0.017 3.7E-07 53.9 6.8 68 126-206 4-72 (104)
98 cd05024 S-100A10 S-100A10: A s 95.9 0.053 1.2E-06 49.3 9.2 72 130-206 6-77 (91)
99 PF13202 EF-hand_5: EF hand; P 95.8 0.013 2.8E-07 40.3 3.6 23 225-247 3-25 (25)
100 KOG0046|consensus 95.7 0.025 5.5E-07 64.9 7.7 67 177-249 19-85 (627)
101 KOG0040|consensus 95.6 0.021 4.6E-07 71.8 6.6 66 178-251 2254-2326(2399)
102 COG4097 Predicted ferric reduc 95.4 0.025 5.3E-07 63.0 6.1 194 343-558 51-257 (438)
103 KOG0039|consensus 95.4 0.083 1.8E-06 64.5 11.2 72 132-206 18-90 (646)
104 KOG0751|consensus 95.1 0.093 2E-06 60.0 9.2 54 141-206 84-137 (694)
105 PLN03123 poly [ADP-ribose] pol 95.0 0.021 4.6E-07 71.9 4.5 86 503-597 394-482 (981)
106 PF13405 EF-hand_6: EF-hand do 94.6 0.038 8.2E-07 39.7 3.2 26 133-158 1-27 (31)
107 KOG2562|consensus 94.5 0.073 1.6E-06 60.7 6.5 103 133-251 226-345 (493)
108 smart00054 EFh EF-hand, calciu 94.4 0.036 7.9E-07 37.1 2.7 27 179-205 2-28 (29)
109 PF14658 EF-hand_9: EF-hand do 94.3 0.14 3E-06 43.7 6.3 59 137-205 3-64 (66)
110 PF14788 EF-hand_10: EF hand; 94.2 0.13 2.7E-06 41.7 5.5 50 147-206 1-50 (51)
111 KOG0038|consensus 94.2 0.29 6.3E-06 47.8 9.0 120 109-249 5-136 (189)
112 PF09279 EF-hand_like: Phospho 94.0 0.2 4.3E-06 44.4 7.1 70 178-251 1-71 (83)
113 COG2717 Predicted membrane pro 93.9 0.16 3.4E-06 53.0 7.1 109 332-473 45-153 (209)
114 KOG1029|consensus 93.7 0.37 8E-06 57.8 10.4 62 176-247 194-255 (1118)
115 PF10591 SPARC_Ca_bdg: Secrete 93.1 0.084 1.8E-06 50.0 3.4 60 130-201 52-112 (113)
116 KOG4578|consensus 92.9 0.044 9.6E-07 59.6 1.4 67 178-251 334-400 (421)
117 KOG2043|consensus 92.6 0.089 1.9E-06 65.7 3.5 69 521-599 673-742 (896)
118 KOG0032|consensus 92.5 0.11 2.3E-06 59.6 3.8 64 7-78 232-298 (382)
119 smart00054 EFh EF-hand, calciu 91.9 0.24 5.3E-06 32.9 3.6 25 225-249 4-28 (29)
120 PF08022 FAD_binding_8: FAD-bi 91.6 0.052 1.1E-06 50.5 0.0 58 525-584 9-70 (105)
121 PF09069 EF-hand_3: EF-hand; 90.6 1 2.2E-05 41.0 7.2 76 176-254 2-80 (90)
122 KOG0046|consensus 90.3 0.7 1.5E-05 53.6 7.2 74 125-206 12-86 (627)
123 KOG0169|consensus 90.1 3.5 7.6E-05 50.2 13.1 124 124-250 128-275 (746)
124 KOG3548|consensus 89.8 0.21 4.6E-06 61.0 2.8 49 551-599 990-1039(1176)
125 KOG3866|consensus 89.0 0.76 1.6E-05 50.0 5.9 71 179-249 246-324 (442)
126 KOG3555|consensus 88.3 0.48 1E-05 52.2 4.0 63 176-250 249-311 (434)
127 KOG2243|consensus 87.4 3.2 7E-05 52.5 10.2 58 182-248 4062-4119(5019)
128 KOG4666|consensus 86.8 1.1 2.5E-05 49.1 5.7 68 176-250 258-325 (412)
129 KOG1955|consensus 85.7 1.3 2.8E-05 51.0 5.6 81 124-216 223-305 (737)
130 KOG0607|consensus 85.2 1.1 2.4E-05 49.5 4.7 72 6-79 284-367 (463)
131 PLN02952 phosphoinositide phos 83.0 6.9 0.00015 47.4 10.5 96 143-250 12-111 (599)
132 KOG0042|consensus 81.7 2.1 4.6E-05 50.4 5.3 64 178-249 594-657 (680)
133 KOG0615|consensus 81.0 0.85 1.8E-05 51.9 1.8 66 6-78 374-442 (475)
134 KOG4065|consensus 80.3 4 8.8E-05 38.6 5.7 73 125-202 62-142 (144)
135 KOG0604|consensus 80.3 1.4 3E-05 48.5 3.1 69 7-79 257-328 (400)
136 KOG4347|consensus 78.9 1.8 3.9E-05 51.6 3.7 59 130-199 553-612 (671)
137 KOG4347|consensus 78.2 12 0.00026 45.0 10.1 118 116-243 488-612 (671)
138 PF09068 EF-hand_2: EF hand; 77.8 13 0.00028 36.1 8.6 87 117-205 26-125 (127)
139 PF05042 Caleosin: Caleosin re 74.6 14 0.00031 37.5 8.2 68 176-247 95-164 (174)
140 KOG1955|consensus 74.3 5.3 0.00012 46.2 5.6 62 177-248 231-292 (737)
141 KOG3555|consensus 72.9 3.5 7.7E-05 45.7 3.7 60 132-205 250-310 (434)
142 KOG3524|consensus 72.7 2.6 5.6E-05 50.6 2.8 66 509-585 125-190 (850)
143 PRK07956 ligA NAD-dependent DN 72.5 4.3 9.4E-05 49.9 4.8 67 510-585 598-665 (665)
144 KOG1707|consensus 71.7 15 0.00033 43.8 8.7 70 177-257 315-387 (625)
145 PRK06063 DNA polymerase III su 71.2 4.7 0.0001 45.1 4.3 58 516-582 246-305 (313)
146 PRK14350 ligA NAD-dependent DN 66.9 6.9 0.00015 48.1 4.9 59 515-582 607-665 (669)
147 KOG0035|consensus 66.7 12 0.00026 46.9 6.7 72 176-251 746-818 (890)
148 KOG1029|consensus 66.6 11 0.00023 46.0 6.1 72 130-213 193-266 (1118)
149 PF05517 p25-alpha: p25-alpha 65.8 18 0.00039 36.2 6.8 66 179-249 1-69 (154)
150 PF05042 Caleosin: Caleosin re 65.3 12 0.00027 38.0 5.5 77 178-258 8-133 (174)
151 KOG4578|consensus 61.7 6.3 0.00014 43.5 2.8 65 132-205 333-398 (421)
152 PRK06195 DNA polymerase III su 61.2 9.9 0.00021 42.4 4.4 65 510-583 228-307 (309)
153 COG0272 Lig NAD-dependent DNA 61.1 10 0.00022 46.1 4.8 59 515-582 608-666 (667)
154 KOG1707|consensus 60.0 25 0.00054 42.1 7.4 42 177-221 195-236 (625)
155 PRK14351 ligA NAD-dependent DN 59.4 12 0.00026 46.4 5.0 66 510-584 617-684 (689)
156 KOG0169|consensus 59.3 16 0.00035 44.8 5.9 75 176-258 135-212 (746)
157 KOG0966|consensus 57.9 12 0.00026 45.9 4.6 82 501-594 635-720 (881)
158 KOG2481|consensus 55.9 11 0.00024 44.1 3.7 49 549-602 373-422 (570)
159 KOG0323|consensus 54.1 5.2 0.00011 48.5 0.7 50 550-599 484-534 (635)
160 PF04558 tRNA_synt_1c_R1: Glut 51.4 99 0.0022 31.4 9.3 53 172-229 80-132 (164)
161 PF09279 EF-hand_like: Phospho 50.8 29 0.00064 30.4 4.9 63 133-205 1-69 (83)
162 KOG3548|consensus 49.3 9.7 0.00021 47.4 2.0 42 550-591 1120-1161(1176)
163 KOG4403|consensus 48.7 78 0.0017 36.5 8.6 62 132-206 68-130 (575)
164 PF08726 EFhand_Ca_insen: Ca2+ 47.1 18 0.0004 31.3 2.8 30 174-204 3-32 (69)
165 COG5275 BRCT domain type II [G 46.8 28 0.00061 36.5 4.5 60 516-584 171-231 (276)
166 TIGR00575 dnlj DNA ligase, NAD 46.4 17 0.00038 44.7 3.6 52 516-576 599-650 (652)
167 KOG0998|consensus 46.3 11 0.00024 47.7 1.9 64 177-250 283-346 (847)
168 KOG0599|consensus 44.7 6.5 0.00014 42.9 -0.4 62 9-78 224-288 (411)
169 PF09842 DUF2069: Predicted me 44.0 1.7E+02 0.0036 27.7 9.0 104 302-460 2-105 (109)
170 COG5163 NOP7 Protein required 43.3 11 0.00025 42.5 1.2 50 548-602 396-446 (591)
171 PLN02223 phosphoinositide phos 43.2 79 0.0017 37.9 8.1 76 174-250 13-93 (537)
172 PF10192 GpcrRhopsn4: Rhodopsi 42.8 1E+02 0.0023 33.3 8.5 75 313-397 77-155 (257)
173 PF08414 NADPH_Ox: Respiratory 42.3 63 0.0014 30.0 5.6 59 131-206 29-93 (100)
174 KOG1265|consensus 40.7 1.6E+02 0.0036 37.1 10.2 74 174-251 218-301 (1189)
175 PF14513 DAG_kinase_N: Diacylg 39.4 43 0.00093 33.0 4.4 73 110-191 6-83 (138)
176 KOG0035|consensus 37.3 97 0.0021 39.2 7.9 85 107-201 759-848 (890)
177 PF14358 DUF4405: Domain of un 36.3 38 0.00083 28.4 3.1 24 372-395 40-63 (64)
178 KOG3524|consensus 34.9 34 0.00073 41.7 3.4 84 505-598 213-296 (850)
179 PF12174 RST: RCD1-SRO-TAF4 (R 33.1 72 0.0016 27.8 4.3 40 167-206 15-54 (70)
180 cd06186 NOX_Duox_like_FAD_NADP 32.3 36 0.00078 35.0 2.9 41 525-565 4-47 (210)
181 TIGR01848 PHA_reg_PhaR polyhyd 30.9 85 0.0018 29.6 4.6 63 184-250 10-78 (107)
182 KOG2871|consensus 29.9 43 0.00093 38.0 2.9 68 173-247 305-372 (449)
183 PF09068 EF-hand_2: EF hand; 29.3 1.5E+02 0.0032 28.8 6.2 72 177-248 41-124 (127)
184 PLN02230 phosphoinositide phos 28.5 1.7E+02 0.0036 35.8 7.8 74 174-250 26-103 (598)
185 PF08414 NADPH_Ox: Respiratory 27.2 2.1E+02 0.0046 26.7 6.4 63 177-249 30-92 (100)
186 PF04876 Tenui_NCP: Tenuivirus 26.7 4E+02 0.0087 26.7 8.6 69 188-259 94-170 (175)
187 KOG3866|consensus 26.3 91 0.002 34.6 4.6 63 136-204 248-323 (442)
188 PLN02222 phosphoinositide phos 26.3 1.7E+02 0.0037 35.7 7.4 68 174-250 22-91 (581)
189 PLN02859 glutamine-tRNA ligase 24.8 4E+02 0.0087 33.7 10.3 54 172-230 82-135 (788)
190 PF10726 DUF2518: Protein of f 24.6 1.2E+02 0.0025 30.2 4.6 26 374-399 8-33 (145)
191 PLN02228 Phosphoinositide phos 23.5 2.2E+02 0.0047 34.7 7.5 69 173-250 20-93 (567)
192 KOG0042|consensus 23.2 1.5E+02 0.0033 35.6 5.9 73 124-206 585-658 (680)
193 COG3038 CybB Cytochrome B561 [ 22.9 2.7E+02 0.0059 28.8 7.1 67 331-397 82-163 (181)
194 PRK10263 DNA translocase FtsK; 22.5 1.2E+02 0.0027 40.1 5.5 15 378-392 115-129 (1355)
195 PF07879 PHB_acc_N: PHB/PHA ac 22.1 73 0.0016 27.3 2.3 22 184-205 10-31 (64)
196 COG2976 Uncharacterized protei 21.4 77 0.0017 33.2 2.8 35 291-327 14-48 (207)
197 cd02977 ArsC_family Arsenate R 21.0 1.2E+02 0.0026 27.8 3.8 63 183-255 26-91 (105)
198 PRK11513 cytochrome b561; Prov 20.4 3E+02 0.0066 28.0 7.0 56 342-397 90-157 (176)
199 KOG4286|consensus 20.4 5.1E+02 0.011 32.4 9.5 112 116-235 404-520 (966)
200 KOG4301|consensus 20.4 1.5E+02 0.0032 33.4 4.9 91 141-251 120-217 (434)
201 KOG3449|consensus 20.4 3.2E+02 0.007 25.9 6.3 54 179-245 3-56 (112)
202 PF05517 p25-alpha: p25-alpha 20.1 6.4E+02 0.014 25.1 9.1 91 133-232 3-94 (154)
203 cd03035 ArsC_Yffb Arsenate Red 20.0 1E+02 0.0022 28.7 3.1 64 183-255 26-89 (105)
No 1
>KOG0039|consensus
Probab=100.00 E-value=4e-40 Score=391.56 Aligned_cols=395 Identities=24% Similarity=0.340 Sum_probs=312.1
Q ss_pred CCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q psy8382 145 EKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTM 224 (864)
Q Consensus 145 dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~ 224 (864)
+| |+++||. +.+.+.|++++..|+++|. ++|.++.+|+..++...+.........+...++..
T Consensus 2 ~~-~~~~~~~---------------~~~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (646)
T KOG0039|consen 2 EG-ISFQELK---------------ITDCSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANWLSLIKKQTEEYAA 64 (646)
T ss_pred CC-cchhhhc---------------ccCCChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhhhhhhhhhhhHHHH
Confidence 56 8888854 4467889999999999998 99999999999999987665554445666777777
Q ss_pred HHHHHhcCCCCcceeHHHHHHHHHhccchHHHHHhhhhccccCCCCCCcchhhhHHHhhhccccccchhhhhhcccchhh
Q psy8382 225 ALFEDADSENRGAITYESLKNQLEKHGGLLENLSISIDRWLVPPKPKKLANQSRLSQLIALRPYQLTLPYIKNNYVYLGF 304 (864)
Q Consensus 225 ~if~~~D~d~dG~IsfeEF~~~l~~~p~ll~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~n~~~~~~~ 304 (864)
.++.+.|.++.|.+.++++..++...+........... ++.....+..+.. . ....++.+.+...|+.+++.+.++
T Consensus 65 ~~~~~~~~~~~~y~~~~~~~~ll~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~ 140 (646)
T KOG0039|consen 65 LIMEELDPDHKGYITNEDLEILLLQIPTLLFAILLSFA-NLSLLLSQPLKPT-R--RKPLLRNLVRMGAFLPNLWLRVWV 140 (646)
T ss_pred HhhhhccccccceeeecchhHHHHhchHHHHHHHHHHH-HHHhhhccccccc-c--ccccchheeeeeeeeccceEeeee
Confidence 89999999999999999999999998877666555543 1111111110000 0 000123345557889999999999
Q ss_pred HHHHHHHHHHhhhhhhhhccccc------eeehhhhcccccccchhhHHHHHHHHHHHHhhh-hcCCcceeeCCchhhHH
Q psy8382 305 MFFYLLVNIVLFTSRMYVFRKSN------YYVIFARACGQCLNFNCMFVLVLMLRHCITFLR-TRGFSVFLPLDQHIYFH 377 (864)
Q Consensus 305 l~l~l~~~i~lf~~~~~~y~~~~------~~~~iaRg~g~~l~~n~alillpv~Rn~it~LR-~t~l~~~ipfD~~i~fH 377 (864)
+++|+++++++|.|+++.|.... ..+.+++++|.++++||+++++||||+.+++|| .+++..++|+|+++.||
T Consensus 141 ~~~~l~~~~~lf~~~~~~y~~~~~~~~~g~~~~~~~~~~~~l~~~~~~ill~~~R~~~~~L~~~~fl~~~~p~~~n~~fh 220 (646)
T KOG0039|consen 141 LFLWLGLNVGLFTWRFLQYVYLGTRHILGLCLALARGSAETLNFNMALILLPVCRNRLTFLRCSTFLFSYLPFDRNLNFH 220 (646)
T ss_pred ehHHHHHHHHHHHHHHHHHHhhhhhhhhhheeeeeccccccchhhHHHHHHHHHHHHHHHHHHhhhhheEeeccccchHH
Confidence 99999999999999999998876 456789999999999999999999999999999 88888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccccCCccccCCcceeeeccccCCcccccccccccchhHHHHHHHHHHHHhccccc
Q psy8382 378 KMTGFFIFGYSVLHTIMHLLNFSLNVLGDGTINKKGLSLTEWLFTSRPGLFGLINGWANPTGVCLIIILTIMFICSQTFV 457 (864)
Q Consensus 378 k~ig~~i~~~~~lH~iah~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~TG~~~~l~l~lm~~~S~~~v 457 (864)
+++|+.+..+..+|+.+|.+++.......... .........+. .+...+++.++.++||++++++|++|+++|++++
T Consensus 221 ~l~g~~~~~~~~~H~w~~~~~~~~~~ih~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~tGv~~~i~~~im~v~s~~~f 297 (646)
T KOG0039|consen 221 KLVALTIAVFILLHIWLHLVNFFPFLVHGLEY--TISLASELFFL-PKTYKWLLLGVVGLTGVILLILMLIMFVLSLPFF 297 (646)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH--HHHHHHHhccc-chhhhhhhcCCCcchhHHHHHHHHHHHHHhhHHH
Confidence 99999999999999999998876544442100 00000000001 2223456667778899999999999999999999
Q ss_pred cccccchhhHHHHHHHHHHHHhhhhcCC-----CceEEEEeccccccccchhhcccCCCcceehhhhhhhhhhhhcCCce
Q psy8382 458 RKSGSFELLFLGGFNVTLQGFWRVMQPD-----DSVTHVVLGAFTPTFHKLYACLSSKPHVVTVEWLKQTKLSQLLGAGY 532 (864)
Q Consensus 458 RR~~~Fe~F~~tH~l~ivhg~~~~L~pp-----~~~~~ll~p~~l~~~drl~r~v~S~s~v~~~er~~l~~li~lLGa~~ 532 (864)
||+ +||+||||||+++++.++..+|-. ..|+|+++|+++|++||+.|++++..++.... +.++|+++
T Consensus 298 RR~-~~e~F~ytH~l~~v~~illi~hg~~~~~~~~w~~~~~p~~ly~~dR~~r~~r~~~~~~i~~-------~~llp~~v 369 (646)
T KOG0039|consen 298 RRR-FYEAFWYTHHLYIVFYILLIIHGGFRLLGTTWMYIAVPVLLYILDRILRFLRSQKNVKIAK-------VVLLPSDV 369 (646)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHHHHhcCceEEE-------EEEcCCCe
Confidence 998 999999999999875555555433 57788888899999999999988765555544 78999999
Q ss_pred eEeeeccC-CCCCCCCCceEEEecCCChhhhhHhhhcCCc
Q psy8382 533 QEEFMKRD-NPKNNKKASTHLVCPTCSGSKYNAALKWGFP 571 (864)
Q Consensus 533 ~e~~~rK~-~~k~~~gq~thLvcp~~sg~Kw~~A~~w~ip 571 (864)
.++.++|+ .+++.+|||.|++||.++.+|||+..=-..|
T Consensus 370 i~L~~~Kp~~f~y~~Gqyifv~~p~ls~~qwHPFTItSsp 409 (646)
T KOG0039|consen 370 LELIMSKPPGFKYKPGQYIFVNCPSLSKLEWHPFTITSAP 409 (646)
T ss_pred EEEEEeCCCCCCCCCCCEEEEECccccccccCCceeecCC
Confidence 99999996 6789999999999999999999999755555
No 2
>PLN02844 oxidoreductase/ferric-chelate reductase
Probab=99.89 E-value=6.8e-24 Score=252.95 Aligned_cols=236 Identities=15% Similarity=0.237 Sum_probs=177.6
Q ss_pred hHHHHHHHHHHhhhhhhhhccccce-----------------eehhhhcccccccchhhHHHHHHHHHHHHhhhhcCCcc
Q psy8382 304 FMFFYLLVNIVLFTSRMYVFRKSNY-----------------YVIFARACGQCLNFNCMFVLVLMLRHCITFLRTRGFSV 366 (864)
Q Consensus 304 ~l~l~l~~~i~lf~~~~~~y~~~~~-----------------~~~iaRg~g~~l~~n~alillpv~Rn~it~LR~t~l~~ 366 (864)
.-++++++++++++|.++.|..... +..+|+.+|.+...|++|++||++||.+ +++ ..
T Consensus 110 ~e~~~~~~f~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~R~G~la~~~Lpll~llv~Rnn~-l~~----lt 184 (722)
T PLN02844 110 LEILAVLLFFLFLAWTFYARISNDFKKLMPVKSLNLNLWQLKYLRVATRFGLLAEACLALLLLPVLRGLA-LFR----LL 184 (722)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccH-HHH----hh
Confidence 4457777778888888888766431 2357889999999999999999999953 223 13
Q ss_pred eeeCCchhhHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccccCCcceeeeccccCCcccccccccccchhHHHHHHH
Q psy8382 367 FLPLDQHIYFHKMTGFFIFGYSVLHTIMHLLNFSLNVLGDGTINKKGLSLTEWLFTSRPGLFGLINGWANPTGVCLIIIL 446 (864)
Q Consensus 367 ~ipfD~~i~fHk~ig~~i~~~~~lH~iah~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~TG~~~~l~l 446 (864)
.+|||+.+.||||+|+++++++++|+++|++.|+...... .....|.. .+...++|+++++++
T Consensus 185 Gis~e~~i~fHrWlGr~~~llallH~i~~~i~w~~~~~~~-------~~~~~w~~----------~~~~~~~G~IAlv~l 247 (722)
T PLN02844 185 GIQFEASVRYHVWLGTSMIFFATVHGASTLFIWGISHHIQ-------DEIWKWQK----------TGRIYLAGEIALVTG 247 (722)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh-------hhhhhhcc----------CcchhhhHHHHHHHH
Confidence 4899999999999999999999999999987663211110 01111211 122346899999999
Q ss_pred HHHHHhccccccccccchhhHHHHHHHHHHHHhhhhcCCC-ceEEEEeccccccccchhhcccCCCcceehhhhhhhhhh
Q psy8382 447 TIMFICSQTFVRKSGSFELLFLGGFNVTLQGFWRVMQPDD-SVTHVVLGAFTPTFHKLYACLSSKPHVVTVEWLKQTKLS 525 (864)
Q Consensus 447 ~lm~~~S~~~vRR~~~Fe~F~~tH~l~ivhg~~~~L~pp~-~~~~ll~p~~l~~~drl~r~v~S~s~v~~~er~~l~~li 525 (864)
++|+++|+++|||+ +||+||++|++++++.++.++|... .++|+++++.+|.+||+.|.+++.......+ +
T Consensus 248 ~iL~itSl~~iRR~-~YElF~~~H~L~ivflv~~~~H~~~~~~~~v~~~i~L~~~DRllR~~~s~~~~~vvs-------~ 319 (722)
T PLN02844 248 LVIWITSLPQIRRK-RFEIFYYTHHLYIVFLIFFLFHAGDRHFYMVFPGIFLFGLDKLLRIVQSRPETCILS-------A 319 (722)
T ss_pred HHHHHHhhHHHHhh-hhHHHHHHHHHHHHHHHhhhHhhcCcchhhhHHHHHHHHHHHHhheEEEeeeEEEEE-------E
Confidence 99999999999998 9999999999988776666776433 3456777788999999999876543322222 3
Q ss_pred hhcCCceeEeeeccC-CCCCCCCCceEEEecCCChhhhhHhhhcC
Q psy8382 526 QLLGAGYQEEFMKRD-NPKNNKKASTHLVCPTCSGSKYNAALKWG 569 (864)
Q Consensus 526 ~lLGa~~~e~~~rK~-~~k~~~gq~thLvcp~~sg~Kw~~A~~w~ 569 (864)
+.++.++.++.++++ .+++.||||++|.+|..+..+||+..=-+
T Consensus 320 ~~~~~~~v~l~i~r~~~~~f~PGQfV~L~vp~~s~~q~HPFSIaS 364 (722)
T PLN02844 320 RLFPCKAIELVLPKDPGLKYAPTSVIFMKIPSISRFQWHPFSITS 364 (722)
T ss_pred EEecCCEEEEEEECCCCCCcCCCeeEEEEECCCCceeEEEEEeec
Confidence 456778888877776 45789999999999999888999764333
No 3
>PLN02631 ferric-chelate reductase
Probab=99.88 E-value=2.1e-23 Score=247.70 Aligned_cols=232 Identities=18% Similarity=0.195 Sum_probs=175.7
Q ss_pred hHHHHHHHHHHhhhhhhhhccccce----------------eehhhhcccccccchhhHHHHHHHHHH-HHhhhhcCCcc
Q psy8382 304 FMFFYLLVNIVLFTSRMYVFRKSNY----------------YVIFARACGQCLNFNCMFVLVLMLRHC-ITFLRTRGFSV 366 (864)
Q Consensus 304 ~l~l~l~~~i~lf~~~~~~y~~~~~----------------~~~iaRg~g~~l~~n~alillpv~Rn~-it~LR~t~l~~ 366 (864)
.-++++++++++++|.++.|..... ...+|..+|.+...|+.|++||+.||. +.++ .
T Consensus 108 ~e~~~~~~f~~~~~w~~~~y~~~~~~~~~~~~~~~~~~~~~l~~ig~RtGila~~~lpll~L~a~Rnn~L~~l------t 181 (699)
T PLN02631 108 TELTFSLLFVALLAWSLYNYLYLSYHVHLHNDDNAKIWQAKFRAFGLRIGYVGHICWAFLFFPVTRASTILPL------V 181 (699)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhheeccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHH------H
Confidence 4468888888888998888866542 124789999999999999999999994 2333 2
Q ss_pred eeeCCchhhHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccccCCcceeeeccccCCcccccccccccchhHHHHHHH
Q psy8382 367 FLPLDQHIYFHKMTGFFIFGYSVLHTIMHLLNFSLNVLGDGTINKKGLSLTEWLFTSRPGLFGLINGWANPTGVCLIIIL 446 (864)
Q Consensus 367 ~ipfD~~i~fHk~ig~~i~~~~~lH~iah~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~TG~~~~l~l 446 (864)
.++||+.+.||||+|+++++++++|++++++++....... ....|.. ....+++|+++++++
T Consensus 182 G~s~e~~i~yHRWlGri~~~la~iH~i~y~i~~~~~~~~~--------~~~~w~~----------~~~~~~~GviA~v~~ 243 (699)
T PLN02631 182 GLTSESSIKYHIWLGHVSNFLFLVHTVVFLIYWAMINKLM--------ETFAWNP----------TYVPNLAGTIAMVIG 243 (699)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhh--------hhhhccc----------ccchHHHHHHHHHHH
Confidence 4899999999999999999999999999998764221110 0011110 012346899999999
Q ss_pred HHHHHhccccccccccchhhHHHHHHHHHHHHhhhhcCCC-ceEEEEeccccccccchhhcccCCCcceehhhhhhhhhh
Q psy8382 447 TIMFICSQTFVRKSGSFELLFLGGFNVTLQGFWRVMQPDD-SVTHVVLGAFTPTFHKLYACLSSKPHVVTVEWLKQTKLS 525 (864)
Q Consensus 447 ~lm~~~S~~~vRR~~~Fe~F~~tH~l~ivhg~~~~L~pp~-~~~~ll~p~~l~~~drl~r~v~S~s~v~~~er~~l~~li 525 (864)
++|+++|+++|||+ +||+||++|++++++.++.++|-.. +..|+++.+.+|++||++|.+++.......+ +
T Consensus 244 ~lm~~~Sl~~~RRr-~YE~F~~~Hillaifiv~~~~H~g~~w~~~~~~~ialw~~DR~lR~~r~~~~~~lv~-------~ 315 (699)
T PLN02631 244 IAMWVTSLPSFRRK-KFELFFYTHHLYGLYIVFYVIHVGDSWFCMILPNIFLFFIDRYLRFLQSTKRSRLVS-------A 315 (699)
T ss_pred HHHHHhccHHHHhh-hhhHHHHHHHHHHHHHHheEEecCCchHHHHHHHHHHHHHHHHHHHHHHhceEEEEE-------E
Confidence 99999999999998 9999999999887766666666433 3334456678999999999886554332222 4
Q ss_pred hhcCCceeEeeeccC-CCCCCCCCceEEEecCCChhhhhHhhh
Q psy8382 526 QLLGAGYQEEFMKRD-NPKNNKKASTHLVCPTCSGSKYNAALK 567 (864)
Q Consensus 526 ~lLGa~~~e~~~rK~-~~k~~~gq~thLvcp~~sg~Kw~~A~~ 567 (864)
+.+++++.++.++++ ..++.||||.+|.+|.++.++||+..=
T Consensus 316 ~~l~~d~l~l~~~~~~~~~~~PGQfvfL~~p~~s~~q~HPFSI 358 (699)
T PLN02631 316 RILPSDNLELTFSKTPGLHYTPTSILFLHVPSISKLQWHPFTI 358 (699)
T ss_pred EEeCCCeEEEEEEcCCCCcCCCCceEEEEeccCCccceEEEEE
Confidence 567888888888765 456799999999999998899998643
No 4
>PLN02292 ferric-chelate reductase
Probab=99.86 E-value=1.1e-22 Score=242.04 Aligned_cols=207 Identities=15% Similarity=0.155 Sum_probs=156.6
Q ss_pred hhhhcccccccchhhHHHHHHHHHH-HHhhhhcCCcceeeCCchhhHHHHHHHHHHHHHHHHHHHHhhhcccccccCCcc
Q psy8382 331 IFARACGQCLNFNCMFVLVLMLRHC-ITFLRTRGFSVFLPLDQHIYFHKMTGFFIFGYSVLHTIMHLLNFSLNVLGDGTI 409 (864)
Q Consensus 331 ~iaRg~g~~l~~n~alillpv~Rn~-it~LR~t~l~~~ipfD~~i~fHk~ig~~i~~~~~lH~iah~~n~~~~~~~~~~~ 409 (864)
.+|..+|.+.+.+++++++|+.||. +.++ ..+|||+.+.||||+|+++++++++|+++|.+.+.....
T Consensus 168 ~vg~R~Gila~~~lpll~l~~~Rnn~L~~l------tG~s~e~f~~yHRWlGrii~ll~~lH~i~y~i~~~~~~~----- 236 (702)
T PLN02292 168 SIAVRLGLVGNICLAFLFYPVARGSSLLAA------VGLTSESSIKYHIWLGHLVMTLFTSHGLCYIIYWISMNQ----- 236 (702)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHH------HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-----
Confidence 4788999999999999999999994 2222 248999999999999999999999999999887632110
Q ss_pred ccCCcceeeeccccCCcccccccccccchhHHHHHHHHHHHHhccccccccccchhhHHHHHHHHHHHHhhhhcCCC-ce
Q psy8382 410 NKKGLSLTEWLFTSRPGLFGLINGWANPTGVCLIIILTIMFICSQTFVRKSGSFELLFLGGFNVTLQGFWRVMQPDD-SV 488 (864)
Q Consensus 410 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~TG~~~~l~l~lm~~~S~~~vRR~~~Fe~F~~tH~l~ivhg~~~~L~pp~-~~ 488 (864)
......|. ..+..+++|+++++++++|+++|+++|||+ +||+||++|++++++.++.++|-.. ..
T Consensus 237 ---~~~~~~w~----------~~~~~~i~G~iAlv~~~il~v~Sl~~iRR~-~YE~F~~~HiL~~v~~v~~~~H~~~~~~ 302 (702)
T PLN02292 237 ---VSQMLEWD----------RTGVSNLAGEIALVAGLVMWATTYPKIRRR-FFEVFFYTHYLYIVFMLFFVFHVGISFA 302 (702)
T ss_pred ---hhhhhhcc----------ccchHHHHHHHHHHHHHHHHHHhhHHHHhc-ccHhHHHHHHHHHHHHeeeehhhhhHHH
Confidence 00111111 123456799999999999999999999998 9999999999987665555555332 22
Q ss_pred EEEEeccccccccchhhcccCCCcceehhhhhhhhhhhhcCCceeEeeeccCC-CCCCCCCceEEEecCCChhhhhHhhh
Q psy8382 489 THVVLGAFTPTFHKLYACLSSKPHVVTVEWLKQTKLSQLLGAGYQEEFMKRDN-PKNNKKASTHLVCPTCSGSKYNAALK 567 (864)
Q Consensus 489 ~~ll~p~~l~~~drl~r~v~S~s~v~~~er~~l~~li~lLGa~~~e~~~rK~~-~k~~~gq~thLvcp~~sg~Kw~~A~~ 567 (864)
+++++.+.+|.+||+.|.+++..++...+ ++.++.++.++.++++. .++.||||.||.+|..+.++||+..=
T Consensus 303 ~~~~~~i~l~~~DR~lR~~r~~~~~~Iv~-------~~~l~~dvv~L~~~~~~~~~~~PGQ~vfL~~P~~s~~q~HPFTI 375 (702)
T PLN02292 303 LISFPGFYIFLVDRFLRFLQSRNNVKLVS-------ARVLPCDTVELNFSKNPMLMYSPTSIMFVNIPSISKLQWHPFTI 375 (702)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcceEEEE-------EEEcCCCEEEEEEEcCCCCCcCCCCeEEEEEccCCccceeeeEe
Confidence 33455567899999999886553333332 44677889998887764 56789999999999888888987653
Q ss_pred cC
Q psy8382 568 WG 569 (864)
Q Consensus 568 w~ 569 (864)
-+
T Consensus 376 aS 377 (702)
T PLN02292 376 TS 377 (702)
T ss_pred ec
Confidence 33
No 5
>KOG0034|consensus
Probab=99.70 E-value=2.1e-16 Score=160.66 Aligned_cols=145 Identities=29% Similarity=0.545 Sum_probs=126.3
Q ss_pred CHHHHHhhhhhcC----CCHHHHHHHHHHHhh-hcC-CCCcccHHHHHHHHHhH-----------------------HHH
Q psy8382 113 RIHHNLVCLPRSG----FDKGNLEWLEQLFRQ-TVG-DEKEICRDDFKKILITK-----------------------NEF 163 (864)
Q Consensus 113 ~~~el~~l~~~l~----fs~~eieeL~~~F~~-D~d-~dG~I~~eEF~~~l~~~-----------------------~EF 163 (864)
+.+++..+...++ |+..|++.|+.+|.+ |.+ ++|.|+.+||..++... .+|
T Consensus 10 ~~~~~~~~~~~~~~~~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~~Np~~~rI~~~f~~~~~~~~v~F~~F 89 (187)
T KOG0034|consen 10 SDEDLEELQMYTGDPTQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPELALNPLADRIIDRFDTDGNGDPVDFEEF 89 (187)
T ss_pred chhhhHHHHhccCCCcccCHHHHHHHHHHHHHhccccccCccCHHHHHHHHHHhcCcHHHHHHHHHhccCCCCccCHHHH
Confidence 3455666667777 999999999999999 998 99999999999988421 189
Q ss_pred HHHHHHhcCCCCh-HHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCC--HHHHHHHHHHHHHHhcCCCCcceeH
Q psy8382 164 IDAMHQFAGQSPD-DKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFS--EEQIDHLTMALFEDADSENRGAITY 240 (864)
Q Consensus 164 l~~l~~~~~~~~e-ekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls--~e~i~~iv~~if~~~D~d~dG~Isf 240 (864)
+..++.+...... +|++.+|++||.|++|+|+.+|+..++..++ |...+ +++++.+++.+|.++|.|+||+|+|
T Consensus 90 v~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~---~~~~~~~~e~~~~i~d~t~~e~D~d~DG~Isf 166 (187)
T KOG0034|consen 90 VRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMV---GENDDMSDEQLEDIVDKTFEEADTDGDGKISF 166 (187)
T ss_pred HHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH---ccCCcchHHHHHHHHHHHHHHhCCCCCCcCcH
Confidence 9999988877655 5999999999999999999999999999885 43444 8999999999999999999999999
Q ss_pred HHHHHHHHhccchHHHHHhh
Q psy8382 241 ESLKNQLEKHGGLLENLSIS 260 (864)
Q Consensus 241 eEF~~~l~~~p~ll~~l~~~ 260 (864)
+||+..+.+.|.+.+.+++.
T Consensus 167 eEf~~~v~~~P~~~~~m~~~ 186 (187)
T KOG0034|consen 167 EEFCKVVEKQPDLLEKMTIR 186 (187)
T ss_pred HHHHHHHHcCccHHHHcCCC
Confidence 99999999999999987653
No 6
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.68 E-value=3.2e-16 Score=154.49 Aligned_cols=122 Identities=24% Similarity=0.461 Sum_probs=94.7
Q ss_pred hcCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHH-------------------------HHHHHHHHhc-CCCC
Q psy8382 123 RSGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKN-------------------------EFIDAMHQFA-GQSP 175 (864)
Q Consensus 123 ~l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~-------------------------EFl~~l~~~~-~~~~ 175 (864)
...|+.++++++++.|.. |.|++|.|++.||..++...+ +|+.+|.... ....
T Consensus 11 ~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~~~~~idf~~Fl~~ms~~~~~~~~ 90 (160)
T COG5126 11 FTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDAGNETVDFPEFLTVMSVKLKRGDK 90 (160)
T ss_pred cccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccCCCCccCHHHHHHHHHHHhccCCc
Confidence 344555555555555555 555555555555555553210 5677776655 5677
Q ss_pred hHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhccc
Q psy8382 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHGG 252 (864)
Q Consensus 176 eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p~ 252 (864)
+++++++|++||+|+||+|+.+||+.+|+.+ |..+++++++. +++.+|.|+||.|+|++|++++...+.
T Consensus 91 ~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~l----ge~~~deev~~----ll~~~d~d~dG~i~~~eF~~~~~~~~~ 159 (160)
T COG5126 91 EEELREAFKLFDKDHDGYISIGELRRVLKSL----GERLSDEEVEK----LLKEYDEDGDGEIDYEEFKKLIKDSPT 159 (160)
T ss_pred HHHHHHHHHHhCCCCCceecHHHHHHHHHhh----cccCCHHHHHH----HHHhcCCCCCceEeHHHHHHHHhccCC
Confidence 8999999999999999999999999999987 99999999999 999999999999999999999887653
No 7
>KOG0044|consensus
Probab=99.67 E-value=5.6e-16 Score=157.72 Aligned_cols=150 Identities=23% Similarity=0.365 Sum_probs=117.9
Q ss_pred cCCHHHHHhhhhhcCCCHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHhHH---------------------------HH
Q psy8382 111 SLRIHHNLVCLPRSGFDKGNLEWLEQLFRQTVGDEKEICRDDFKKILITKN---------------------------EF 163 (864)
Q Consensus 111 ~L~~~el~~l~~~l~fs~~eieeL~~~F~~D~d~dG~I~~eEF~~~l~~~~---------------------------EF 163 (864)
.++++.++.+.+.++|+.+|++++++-|.. .+.+|.++.++|+.++.... ||
T Consensus 8 ~~~~~~~e~l~~~t~f~~~ei~~~Yr~Fk~-~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Ef 86 (193)
T KOG0044|consen 8 KLQPESLEQLVQQTKFSKKEIQQWYRGFKN-ECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEF 86 (193)
T ss_pred cCCcHHHHHHHHhcCCCHHHHHHHHHHhcc-cCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHH
Confidence 344444555555666666666666666655 34566666666666664321 68
Q ss_pred HHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCC---CCCHHHHHHHHHHHHHHhcCCCCcceeH
Q psy8382 164 IDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGM---QFSEEQIDHLTMALFEDADSENRGAITY 240 (864)
Q Consensus 164 l~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~---~ls~e~i~~iv~~if~~~D~d~dG~Isf 240 (864)
+.+++...++..+++++++|++||.||+|+|+++|+-++++.++...|. ...++..++.++.+|+++|.|+||.||+
T Consensus 87 i~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~ 166 (193)
T KOG0044|consen 87 ICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTL 166 (193)
T ss_pred HHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccH
Confidence 8899999999999999999999999999999999999999999877664 1234457778888999999999999999
Q ss_pred HHHHHHHHhccchHHHHHhhh
Q psy8382 241 ESLKNQLEKHGGLLENLSISI 261 (864)
Q Consensus 241 eEF~~~l~~~p~ll~~l~~~~ 261 (864)
+||...+..+|.+++.++.+.
T Consensus 167 eef~~~~~~d~~i~~~l~~~~ 187 (193)
T KOG0044|consen 167 EEFIEGCKADPSILRALEQDP 187 (193)
T ss_pred HHHHHHhhhCHHHHHHhhhcc
Confidence 999999999999999988765
No 8
>KOG0027|consensus
Probab=99.57 E-value=2.4e-14 Score=141.73 Aligned_cols=130 Identities=19% Similarity=0.389 Sum_probs=110.9
Q ss_pred hhhccCcCCHHHHHhhhhhcCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCC-CChHHHHHH
Q psy8382 105 QTVAYTSLRIHHNLVCLPRSGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQ-SPDDKIKFL 182 (864)
Q Consensus 105 ~~~~s~~L~~~el~~l~~~l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~-~~eekL~~a 182 (864)
...+.+.++..++..+++.+|.++ ..+++..++.. |.|++|.|+++||..++.... ...... ...+.++.+
T Consensus 18 D~d~~G~i~~~el~~~lr~lg~~~-t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~------~~~~~~~~~~~el~ea 90 (151)
T KOG0027|consen 18 DKDGDGKISVEELGAVLRSLGQNP-TEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLG------EEKTDEEASSEELKEA 90 (151)
T ss_pred CCCCCCcccHHHHHHHHHHcCCCC-CHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhh------cccccccccHHHHHHH
Confidence 345668899999999999999987 55899999999 999999999999887775431 000001 235699999
Q ss_pred hhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 183 Fk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
|++||+|++|+||.+||+.+|..+ |...+.++++. +++.+|.|+||.|+|+||+.+|..
T Consensus 91 F~~fD~d~~G~Is~~el~~~l~~l----g~~~~~~e~~~----mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 91 FRVFDKDGDGFISASELKKVLTSL----GEKLTDEECKE----MIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred HHHHccCCCCcCcHHHHHHHHHHh----CCcCCHHHHHH----HHHhcCCCCCCeEeHHHHHHHHhc
Confidence 999999999999999999999997 99999999888 999999999999999999999875
No 9
>KOG0028|consensus
Probab=99.48 E-value=3.8e-13 Score=130.15 Aligned_cols=131 Identities=22% Similarity=0.429 Sum_probs=116.3
Q ss_pred HHHhhhhccCcCCHHHHHhhhhhcCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHH
Q psy8382 101 QLFRQTVAYTSLRIHHNLVCLPRSGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKI 179 (864)
Q Consensus 101 ~L~~~~~~s~~L~~~el~~l~~~l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL 179 (864)
+++ ....++.++-+||...++++||..+ .+++.++... |+++.|.|++++|...+... +...++.+++
T Consensus 40 ~lf-d~~~~g~iD~~EL~vAmralGFE~~-k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k---------~~e~dt~eEi 108 (172)
T KOG0028|consen 40 ELF-DPDMAGKIDVEELKVAMRALGFEPK-KEEILKLLADVDKEGSGKITFEDFRRVMTVK---------LGERDTKEEI 108 (172)
T ss_pred Hhh-ccCCCCcccHHHHHHHHHHcCCCcc-hHHHHHHHHhhhhccCceechHHHHHHHHHH---------HhccCcHHHH
Confidence 344 5688899999999999999999984 4788888888 99999999999988766433 4455688999
Q ss_pred HHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhc
Q psy8382 180 KFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKH 250 (864)
Q Consensus 180 ~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~ 250 (864)
+.+|+.+|.|++|.|+..+|+.+.+.+ |++++++++++ |++++|.|+||.|+-+||..+|.+.
T Consensus 109 ~~afrl~D~D~~Gkis~~~lkrvakeL----genltD~El~e----MIeEAd~d~dgevneeEF~~imk~t 171 (172)
T KOG0028|consen 109 KKAFRLFDDDKTGKISQRNLKRVAKEL----GENLTDEELME----MIEEADRDGDGEVNEEEFIRIMKKT 171 (172)
T ss_pred HHHHHcccccCCCCcCHHHHHHHHHHh----CccccHHHHHH----HHHHhcccccccccHHHHHHHHhcC
Confidence 999999999999999999999999987 99999999999 9999999999999999999998764
No 10
>PTZ00183 centrin; Provisional
Probab=99.42 E-value=3.4e-12 Score=125.75 Aligned_cols=137 Identities=22% Similarity=0.369 Sum_probs=111.8
Q ss_pred HHHHHHh--hhhccCcCCHHHHHhhhhhcCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCC
Q psy8382 98 WLEQLFR--QTVAYTSLRIHHNLVCLPRSGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQS 174 (864)
Q Consensus 98 ~l~~L~~--~~~~s~~L~~~el~~l~~~l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~ 174 (864)
.+.+.+. +..+.+.++..|+..+.+..|+... ...+..+|.. |.+++|.|+++||..++... .....
T Consensus 18 ~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~-~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~---------~~~~~ 87 (158)
T PTZ00183 18 EIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPK-KEEIKQMIADVDKDGSGKIDFEEFLDIMTKK---------LGERD 87 (158)
T ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH---------hcCCC
Confidence 3444443 3466789999999999988776442 3567888888 88999999999987655321 12334
Q ss_pred ChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhccc
Q psy8382 175 PDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHGG 252 (864)
Q Consensus 175 ~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p~ 252 (864)
.++.++.+|+.||.|++|+|+.+||..++..+ |..+++++++. +|..+|.|++|.|+|+||..++...|.
T Consensus 88 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~----~~~l~~~~~~~----~~~~~d~~~~g~i~~~ef~~~~~~~~~ 157 (158)
T PTZ00183 88 PREEILKAFRLFDDDKTGKISLKNLKRVAKEL----GETITDEELQE----MIDEADRNGDGEISEEEFYRIMKKTNL 157 (158)
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh----CCCCCHHHHHH----HHHHhCCCCCCcCcHHHHHHHHhcccC
Confidence 56789999999999999999999999999876 78899999988 899999999999999999999998874
No 11
>PF01794 Ferric_reduct: Ferric reductase like transmembrane component; InterPro: IPR013130 This family includes a common region in the transmembrane proteins mammalian cytochrome b-245 heavy chain (gp91-phox), ferric reductase transmembrane component in yeast and respiratory burst oxidase from Arabidopsis thaliana. This may be a family of flavocytochromes capable of moving electrons across the plasma membrane [] that include a potential FAD binding domain. Mutations in the sequence of cytochrome b-245 heavy chain (gp91-phox) lead to the X-linked chronic granulomatous disease. The bacteriocidal ability of phagocytic cells is reduced and is characterised by the absence of a functional plasma membrane associated NADPH oxidase [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0016021 integral to membrane
Probab=99.33 E-value=1.1e-12 Score=124.58 Aligned_cols=117 Identities=21% Similarity=0.274 Sum_probs=83.7
Q ss_pred cccccchhhHHHHHHHHHHHHhhhhcCCcceeeCCchhhHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccccCCcce
Q psy8382 337 GQCLNFNCMFVLVLMLRHCITFLRTRGFSVFLPLDQHIYFHKMTGFFIFGYSVLHTIMHLLNFSLNVLGDGTINKKGLSL 416 (864)
Q Consensus 337 g~~l~~n~alillpv~Rn~it~LR~t~l~~~ipfD~~i~fHk~ig~~i~~~~~lH~iah~~n~~~~~~~~~~~~~~~~~~ 416 (864)
|.+...++.+++++.+|+. +++ ....+|+|+.+.||||+|+++++++++|+++|++++......+. . ..
T Consensus 2 G~~a~~~l~~~~~l~~R~~--~l~---~~~~~~~~~~~~~Hr~lg~~~~~~~~~H~~~~~~~~~~~~~~~~-----~-~~ 70 (125)
T PF01794_consen 2 GILAFALLPLVFLLGLRNS--PLA---RLTGISFDRLLRFHRWLGRLAFFLALLHGVLYLINWLRFGGWDW-----Q-EW 70 (125)
T ss_pred HHHHHHHHHHHHHHHHhhh--HHH---HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhch-----h-HH
Confidence 3344466666666778883 232 11348999999999999999999999999999987643221100 0 00
Q ss_pred eeeccccCCcccccccccccchhHHHHHHHHHHHHhcccccc-ccccchhhHHHHHHHHH
Q psy8382 417 TEWLFTSRPGLFGLINGWANPTGVCLIIILTIMFICSQTFVR-KSGSFELLFLGGFNVTL 475 (864)
Q Consensus 417 ~~~~~~~~~g~~~~~~g~~~~TG~~~~l~l~lm~~~S~~~vR-R~~~Fe~F~~tH~l~iv 475 (864)
.. ....+....+|+++++++++|+++|++++| |+ .||.||++|++.++
T Consensus 71 ~~----------~~~~~~~~~~G~~a~~~l~~l~~tS~~~~R~r~-~ye~f~~~H~~~~~ 119 (125)
T PF01794_consen 71 FN----------AWLTGPYNLTGIIALLLLLILAVTSFPWIRRRR-NYEIFYYLHILFYI 119 (125)
T ss_pred HH----------HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHH
Confidence 00 111123346999999999999999999999 65 99999999998754
No 12
>KOG0037|consensus
Probab=99.32 E-value=1.9e-11 Score=124.49 Aligned_cols=128 Identities=19% Similarity=0.251 Sum_probs=112.1
Q ss_pred hhhccCcCCHHHHHhhhh---hcCCCHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHH
Q psy8382 105 QTVAYTSLRIHHNLVCLP---RSGFDKGNLEWLEQLFRQTVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKF 181 (864)
Q Consensus 105 ~~~~s~~L~~~el~~l~~---~l~fs~~eieeL~~~F~~D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~ 181 (864)
+.+.++.|..+||+.... -.+|+.++++-+..+|+. +++|+|+++||+.++..+ ..++.
T Consensus 67 D~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~--~~~G~i~f~EF~~Lw~~i----------------~~Wr~ 128 (221)
T KOG0037|consen 67 DRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDR--DNSGTIGFKEFKALWKYI----------------NQWRN 128 (221)
T ss_pred CccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcC--CCCCccCHHHHHHHHHHH----------------HHHHH
Confidence 456778999999998854 456888777777777776 999999999999999876 78999
Q ss_pred HhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhccchHHHHH
Q psy8382 182 LFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHGGLLENLS 258 (864)
Q Consensus 182 aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p~ll~~l~ 258 (864)
+|+.||.|++|.|+..||+++|..+ |..++++-++. ++++.|..++|.|.|++|++++...+.+.+.|.
T Consensus 129 vF~~~D~D~SG~I~~sEL~~Al~~~----Gy~Lspq~~~~----lv~kyd~~~~g~i~FD~FI~ccv~L~~lt~~Fr 197 (221)
T KOG0037|consen 129 VFRTYDRDRSGTIDSSELRQALTQL----GYRLSPQFYNL----LVRKYDRFGGGRIDFDDFIQCCVVLQRLTEAFR 197 (221)
T ss_pred HHHhcccCCCCcccHHHHHHHHHHc----CcCCCHHHHHH----HHHHhccccCCceeHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999997 99999988887 889999877999999999999999887777665
No 13
>PTZ00184 calmodulin; Provisional
Probab=99.29 E-value=3.1e-11 Score=117.26 Aligned_cols=126 Identities=22% Similarity=0.412 Sum_probs=104.0
Q ss_pred hhccCcCCHHHHHhhhhhcCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhh
Q psy8382 106 TVAYTSLRIHHNLVCLPRSGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFR 184 (864)
Q Consensus 106 ~~~s~~L~~~el~~l~~~l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk 184 (864)
..+.+.++.+++..+...++.+.. .+.+..+|.. |.+++|.|+++||..++... .......+.++.+|+
T Consensus 22 ~~~~G~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~---------~~~~~~~~~~~~~F~ 91 (149)
T PTZ00184 22 KDGDGTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPEFLTLMARK---------MKDTDSEEEIKEAFK 91 (149)
T ss_pred CCCCCcCCHHHHHHHHHHhCCCCC-HHHHHHHHHhcCcCCCCcCcHHHHHHHHHHh---------ccCCcHHHHHHHHHH
Confidence 467788999999988887776553 3577888888 88999999999987655321 122344578999999
Q ss_pred hhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 185 VYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 185 ~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
.||.|++|+|+.+||+.++..+ |..++.++++. +++.+|.+++|.|+|+||+.++..
T Consensus 92 ~~D~~~~g~i~~~e~~~~l~~~----~~~~~~~~~~~----~~~~~d~~~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 92 VFDRDGNGFISAAELRHVMTNL----GEKLTDEEVDE----MIREADVDGDGQINYEEFVKMMMS 148 (149)
T ss_pred hhCCCCCCeEeHHHHHHHHHHH----CCCCCHHHHHH----HHHhcCCCCCCcCcHHHHHHHHhc
Confidence 9999999999999999999876 77888888888 899999999999999999988753
No 14
>KOG0031|consensus
Probab=99.29 E-value=4e-11 Score=115.49 Aligned_cols=115 Identities=20% Similarity=0.515 Sum_probs=102.6
Q ss_pred CCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHH----------------------HHHHHHHH-hcCCCChHHHHH
Q psy8382 126 FDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKN----------------------EFIDAMHQ-FAGQSPDDKIKF 181 (864)
Q Consensus 126 fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~----------------------EFl~~l~~-~~~~~~eekL~~ 181 (864)
|+..+|+++++.|.. |.|+||.|+.++++..+.+++ -||..+-. +...++++.+..
T Consensus 26 f~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea~gPINft~FLTmfGekL~gtdpe~~I~~ 105 (171)
T KOG0031|consen 26 FDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEAPGPINFTVFLTMFGEKLNGTDPEEVILN 105 (171)
T ss_pred hhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhCCCCeeHHHHHHHHHHHhcCCCHHHHHHH
Confidence 567799999999999 999999999999999997653 46665543 345578899999
Q ss_pred HhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q psy8382 182 LFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLE 248 (864)
Q Consensus 182 aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~ 248 (864)
+|++||.+++|.|..+.|+++|... |..++++++++ |++.+-.|..|.|+|.+|+.++.
T Consensus 106 AF~~FD~~~~G~I~~d~lre~Ltt~----gDr~~~eEV~~----m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 106 AFKTFDDEGSGKIDEDYLRELLTTM----GDRFTDEEVDE----MYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred HHHhcCccCCCccCHHHHHHHHHHh----cccCCHHHHHH----HHHhCCcccCCceeHHHHHHHHH
Confidence 9999999999999999999999986 99999999999 99999999999999999999987
No 15
>KOG0038|consensus
Probab=99.29 E-value=1.4e-11 Score=117.08 Aligned_cols=114 Identities=22% Similarity=0.505 Sum_probs=98.5
Q ss_pred HHHHHHHhhhcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCC-ChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhc
Q psy8382 132 EWLEQLFRQTVGDEKEICRDDFKKILITKNEFIDAMHQFAGQS-PDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEEN 210 (864)
Q Consensus 132 eeL~~~F~~D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~-~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~ 210 (864)
+.+-+.|.. ||+|.+++++|.++ ++.++... .+-++..+|+.||-|+|++|..++|...+..+ .
T Consensus 74 ~ri~e~FSe--DG~GnlsfddFlDm----------fSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~l---T 138 (189)
T KOG0038|consen 74 RRICEVFSE--DGRGNLSFDDFLDM----------FSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSL---T 138 (189)
T ss_pred HHHHHHhcc--CCCCcccHHHHHHH----------HHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHH---h
Confidence 567788888 99999999996554 44444433 34588999999999999999999999999987 3
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhccchHHHHHhh
Q psy8382 211 GMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHGGLLENLSIS 260 (864)
Q Consensus 211 g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p~ll~~l~~~ 260 (864)
...++++++..+++++++++|.|+||+++|.||..++.+.|+++..|.+.
T Consensus 139 r~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~raPDFlsTFHIR 188 (189)
T KOG0038|consen 139 RDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVILRAPDFLSTFHIR 188 (189)
T ss_pred hccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHhCcchHhhheec
Confidence 55799999999999999999999999999999999999999999988765
No 16
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.10 E-value=2.6e-10 Score=96.52 Aligned_cols=66 Identities=29% Similarity=0.626 Sum_probs=60.9
Q ss_pred HHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHH
Q psy8382 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQL 247 (864)
Q Consensus 178 kL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l 247 (864)
+++.+|+.||+|++|+|+.+||+.+++.+ +...+++.+++.++.+|+.+|.|+||.|+|+||+.+|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~----~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHL----GRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHT----TSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHh----cccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 57899999999999999999999999987 6666788888888999999999999999999999875
No 17
>KOG0036|consensus
Probab=99.00 E-value=4.5e-09 Score=115.46 Aligned_cols=139 Identities=23% Similarity=0.366 Sum_probs=117.8
Q ss_pred CCcccHHHHHHHHHH-HhCCcccccHHHHHHHHhhcCchhHHHhhhhhhhcccccCCccccccccCCCCCCCCCCCCCCC
Q psy8382 16 FDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNISDLYDKVHSFVWYSSQYGHFTPCYVHTNGFYRPSPRSGFDKG 94 (864)
Q Consensus 16 ~~~~~~~~l~~lF~~-~~~~d~~l~~~efkkil~~~d~~dl~~k~~~~~~is~~~~~~~~~~~~~~~~~~p~~rs~~~~~ 94 (864)
.++++.-++..+|+. +.+++|.+|..++.+.+...+. + + .
T Consensus 8 ~~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~---------------------~---~---------------~ 48 (463)
T KOG0036|consen 8 TDEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDH---------------------P---K---------------P 48 (463)
T ss_pred CcHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCC---------------------C---C---------------C
Confidence 456678899999999 6889999999999887544433 0 0 0
Q ss_pred ChHHHHHHHhhhhccCcCCHHHHHhhhhhcCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCC
Q psy8382 95 NLEWLEQLFRQTVAYTSLRIHHNLVCLPRSGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQ 173 (864)
Q Consensus 95 ~~~~l~~L~~~~~~s~~L~~~el~~l~~~l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~ 173 (864)
..+....+|.. |.|.||.+|++||+..+...
T Consensus 49 -----------------------------------~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~------------- 80 (463)
T KOG0036|consen 49 -----------------------------------NYEAAKMLFSAMDANRDGRVDYSEFKRYLDNK------------- 80 (463)
T ss_pred -----------------------------------chHHHHHHHHhcccCcCCcccHHHHHHHHHHh-------------
Confidence 11345567778 99999999999999877543
Q ss_pred CChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhcc
Q psy8382 174 SPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHG 251 (864)
Q Consensus 174 ~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p 251 (864)
+.++..+|+..|.+.||.|+.+|+.+.|+.+ |.++++++++. +++.+|.++++.|+++||...+.-+|
T Consensus 81 --E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~----gi~l~de~~~k----~~e~~d~~g~~~I~~~e~rd~~ll~p 148 (463)
T KOG0036|consen 81 --ELELYRIFQSIDLEHDGKIDPNEIWRYLKDL----GIQLSDEKAAK----FFEHMDKDGKATIDLEEWRDHLLLYP 148 (463)
T ss_pred --HHHHHHHHhhhccccCCccCHHHHHHHHHHh----CCccCHHHHHH----HHHHhccCCCeeeccHHHHhhhhcCC
Confidence 5789999999999999999999999999997 99999999988 99999999999999999999998888
No 18
>KOG0030|consensus
Probab=98.94 E-value=8.5e-09 Score=98.12 Aligned_cols=127 Identities=20% Similarity=0.302 Sum_probs=96.9
Q ss_pred hhhccCcCCHHHHHhhhhhcCCCHHHHHHHHHHHhh-hcC--CCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHH
Q psy8382 105 QTVAYTSLRIHHNLVCLPRSGFDKGNLEWLEQLFRQ-TVG--DEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKF 181 (864)
Q Consensus 105 ~~~~s~~L~~~el~~l~~~l~fs~~eieeL~~~F~~-D~d--~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~ 181 (864)
+..+.++++..++..+++.+|.++.+ .++.+.... +.+ +--+|+|++|.-++... +.-..+...+.+-.
T Consensus 21 D~~gD~ki~~~q~gdvlRalG~nPT~-aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~v-------aknk~q~t~edfve 92 (152)
T KOG0030|consen 21 DRTGDGKISGSQVGDVLRALGQNPTN-AEVLKVLGQPKRREMNVKRLDFEEFLPMYQQV-------AKNKDQGTYEDFVE 92 (152)
T ss_pred hccCcccccHHHHHHHHHHhcCCCcH-HHHHHHHcCcccchhhhhhhhHHHHHHHHHHH-------HhccccCcHHHHHH
Confidence 44567788888888888888888844 566666665 444 44678888876655432 22234456688888
Q ss_pred HhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q psy8382 182 LFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLE 248 (864)
Q Consensus 182 aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~ 248 (864)
-.+.||++++|.|...|||++|..+ |..+++++++. ++.. -.|.+|.|.|++|++.+.
T Consensus 93 gLrvFDkeg~G~i~~aeLRhvLttl----Gekl~eeEVe~----Llag-~eD~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 93 GLRVFDKEGNGTIMGAELRHVLTTL----GEKLTEEEVEE----LLAG-QEDSNGCINYEAFVKHIM 150 (152)
T ss_pred HHHhhcccCCcceeHHHHHHHHHHH----HhhccHHHHHH----HHcc-ccccCCcCcHHHHHHHHh
Confidence 8999999999999999999999997 99999999998 5543 336789999999998765
No 19
>PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A.
Probab=98.93 E-value=3.3e-10 Score=95.45 Aligned_cols=62 Identities=32% Similarity=0.639 Sum_probs=52.2
Q ss_pred ccCCCcceehhhhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecCCChhhhhHhhhcCCceechhh
Q psy8382 507 LSSKPHVVTVEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPTCSGSKYNAALKWGFPSVNKKW 577 (864)
Q Consensus 507 v~S~s~v~~~er~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~~sg~Kw~~A~~w~ipvVt~~W 577 (864)
+++++++.+.++..++.+++.+||.+...+.++. |||||+...+.||+.|++||||||+++|
T Consensus 2 ~i~~sg~~~~~~~~l~~~i~~~Gg~~~~~lt~~~---------THLI~~~~~~~K~~~A~~~gi~vV~~~W 63 (63)
T PF12738_consen 2 VICFSGFSGKERSQLRKLIEALGGKYSKDLTKKT---------THLICSSPEGKKYRKAKEWGIPVVSPDW 63 (63)
T ss_dssp EEEEEEB-TTTCCHHHHHHHCTT-EEESSSSTT----------SEEEEES--HHHHHHHHHCTSEEEEHHH
T ss_pred EEEECCCCHHHHHHHHHHHHHCCCEEeccccCCc---------eEEEEeCCCcHHHHHHHHCCCcEECCCC
Confidence 4567888999999999999999999999875544 9999999999999999999999999999
No 20
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.91 E-value=2.7e-09 Score=96.34 Aligned_cols=66 Identities=11% Similarity=0.253 Sum_probs=59.5
Q ss_pred HHHHHHhhhhcC-CCCCccCHHHHHHHHHH-HHHhcCCCCCH-HHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhc
Q psy8382 177 DKIKFLFRVYDL-DGDGLIQHKELQHVMRA-CMEENGMQFSE-EQIDHLTMALFEDADSENRGAITYESLKNQLEKH 250 (864)
Q Consensus 177 ekL~~aFk~fD~-dgdG~Is~eELr~vL~~-l~~~~g~~ls~-e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~ 250 (864)
..+..+|+.||+ +++|+|+.+||+.+++. + |..+++ +++++ +|+.+|.|+||.|+|+||+.++...
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~el----g~~ls~~~~v~~----mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQQL----PHLLKDVEGLEE----KMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHh----hhhccCHHHHHH----HHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 578999999999 99999999999999998 5 666777 77777 9999999999999999999998764
No 21
>PTZ00183 centrin; Provisional
Probab=98.85 E-value=3.2e-08 Score=97.42 Aligned_cols=109 Identities=20% Similarity=0.314 Sum_probs=89.2
Q ss_pred cCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHH
Q psy8382 124 SGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHV 202 (864)
Q Consensus 124 l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~v 202 (864)
.++++.+++++.+.|.. |.+++|.|+.+||..++.. +......+.+..+|+.+|.+++|.|+.+||..+
T Consensus 9 ~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~----------~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~ 78 (158)
T PTZ00183 9 PGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRS----------LGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDI 78 (158)
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHH----------hCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence 36778899999999999 9999999999998776542 222345678999999999999999999999998
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 203 MRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 203 L~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
+.... ......+.++. +|+.+|.+++|.|+.+||..++..
T Consensus 79 ~~~~~---~~~~~~~~l~~----~F~~~D~~~~G~i~~~e~~~~l~~ 118 (158)
T PTZ00183 79 MTKKL---GERDPREEILK----AFRLFDDDKTGKISLKNLKRVAKE 118 (158)
T ss_pred HHHHh---cCCCcHHHHHH----HHHHhCCCCCCcCcHHHHHHHHHH
Confidence 87542 22344556666 899999999999999999999875
No 22
>KOG0027|consensus
Probab=98.84 E-value=3.1e-08 Score=98.17 Aligned_cols=111 Identities=23% Similarity=0.388 Sum_probs=90.0
Q ss_pred CHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHH
Q psy8382 127 DKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRA 205 (864)
Q Consensus 127 s~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~ 205 (864)
+..++.++.+.|.. |.|++|.|+..||..++.. +.....++++..+++.+|.|++|.|+.+||..++..
T Consensus 3 ~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~----------lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~ 72 (151)
T KOG0027|consen 3 SEEQILELKEAFQLFDKDGDGKISVEELGAVLRS----------LGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEK 72 (151)
T ss_pred CHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHH----------cCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 45577899999999 9999999999998776643 344467899999999999999999999999999987
Q ss_pred HHHhcCCC-CCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhcc
Q psy8382 206 CMEENGMQ-FSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHG 251 (864)
Q Consensus 206 l~~~~g~~-ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p 251 (864)
........ .+.+++.+ +|+.+|.|++|+|+.+|+..+|...-
T Consensus 73 ~~~~~~~~~~~~~el~e----aF~~fD~d~~G~Is~~el~~~l~~lg 115 (151)
T KOG0027|consen 73 LGEEKTDEEASSEELKE----AFRVFDKDGDGFISASELKKVLTSLG 115 (151)
T ss_pred hhcccccccccHHHHHH----HHHHHccCCCCcCcHHHHHHHHHHhC
Confidence 52111111 13447777 99999999999999999999998753
No 23
>PTZ00184 calmodulin; Provisional
Probab=98.80 E-value=7.3e-08 Score=93.55 Aligned_cols=108 Identities=18% Similarity=0.312 Sum_probs=86.5
Q ss_pred CCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHH
Q psy8382 125 GFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVM 203 (864)
Q Consensus 125 ~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL 203 (864)
.+++++++.+...|.. |.+++|.|+.+||..++.. +......+.+..+|+.+|.+++|.|+.+||..++
T Consensus 4 ~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~----------~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l 73 (149)
T PTZ00184 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS----------LGQNPTEAELQDMINEVDADGNGTIDFPEFLTLM 73 (149)
T ss_pred ccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH----------hCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHH
Confidence 4667788999999999 9999999999998775532 2233446789999999999999999999999988
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 204 RACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 204 ~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
...+ ......+.+.. +|+.+|.+++|.|+.+||..++..
T Consensus 74 ~~~~---~~~~~~~~~~~----~F~~~D~~~~g~i~~~e~~~~l~~ 112 (149)
T PTZ00184 74 ARKM---KDTDSEEEIKE----AFKVFDRDGNGFISAAELRHVMTN 112 (149)
T ss_pred HHhc---cCCcHHHHHHH----HHHhhCCCCCCeEeHHHHHHHHHH
Confidence 7642 11223344444 899999999999999999988864
No 24
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.78 E-value=8.3e-08 Score=95.26 Aligned_cols=144 Identities=17% Similarity=0.243 Sum_probs=105.5
Q ss_pred CCCCCCCCcccHHHHHHHHHH-HhCCcccccHHHHHHHHh---hcCchhHHHhhhhhhhcccccCCccccccccCCCCCC
Q psy8382 10 SRPRSGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILI---TKNISDLYDKVHSFVWYSSQYGHFTPCYVHTNGFYRP 85 (864)
Q Consensus 10 ~~~~~~~~~~~~~~l~~lF~~-~~~~d~~l~~~efkkil~---~~d~~dl~~k~~~~~~is~~~~~~~~~~~~~~~~~~p 85 (864)
.+-++.+++++.+++++.|.. +.+++|.|+..+|.+++. .......+.+|+.-++.
T Consensus 8 ~~~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-------------------- 67 (160)
T COG5126 8 LLTFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-------------------- 67 (160)
T ss_pred hhhcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC--------------------
Confidence 456778899999999999999 689999999999999863 23333334443322221
Q ss_pred CCCCCCCCCChHHHHHHHhhhhccCcCCHHHHHhhhhhcCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHH
Q psy8382 86 SPRSGFDKGNLEWLEQLFRQTVAYTSLRIHHNLVCLPRSGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFI 164 (864)
Q Consensus 86 ~~rs~~~~~~~~~l~~L~~~~~~s~~L~~~el~~l~~~l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl 164 (864)
+.+.++..++-.++...--.....++|...|+. |.|++|+|+..|+..++.
T Consensus 68 ----------------------~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~------ 119 (160)
T COG5126 68 ----------------------GNETVDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLK------ 119 (160)
T ss_pred ----------------------CCCccCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHH------
Confidence 234455555544443322223345789999999 999999999999776654
Q ss_pred HHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHH
Q psy8382 165 DAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRA 205 (864)
Q Consensus 165 ~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~ 205 (864)
.+.....++++..+++.+|+|++|+|+.+||.+.+..
T Consensus 120 ----~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 120 ----SLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD 156 (160)
T ss_pred ----hhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence 4455678899999999999999999999999998754
No 25
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.76 E-value=2.4e-08 Score=90.10 Aligned_cols=69 Identities=17% Similarity=0.292 Sum_probs=59.0
Q ss_pred HHHHHHhhhhc-CCCCC-ccCHHHHHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 177 DKIKFLFRVYD-LDGDG-LIQHKELQHVMRACME-ENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 177 ekL~~aFk~fD-~dgdG-~Is~eELr~vL~~l~~-~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
..++.+|+.|| +||+| +|+.+||+.+|+.-+. ..|...+++++++ +++.+|.|+||.|+|+||+.++..
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~----~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDK----VMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHH----HHHHhCCCCCCcCcHHHHHHHHHH
Confidence 57899999998 89999 5999999999998100 0177788888988 999999999999999999998865
No 26
>PLN02964 phosphatidylserine decarboxylase
Probab=98.76 E-value=5.2e-08 Score=115.75 Aligned_cols=121 Identities=17% Similarity=0.259 Sum_probs=100.2
Q ss_pred cCcCCHHHHHhhhhh--cCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhc-CCCChHH---HHH
Q psy8382 109 YTSLRIHHNLVCLPR--SGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFA-GQSPDDK---IKF 181 (864)
Q Consensus 109 s~~L~~~el~~l~~~--l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~-~~~~eek---L~~ 181 (864)
...+++.++..+.+. +.|+.+|++++++.|+. |.|++|.+ +..++.. +. ....+++ ++.
T Consensus 118 ~~~~s~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrs----------lG~~~pte~e~~fi~~ 183 (644)
T PLN02964 118 TNRLSKNTLVGYCELDLFDFVTQEPESACESFDLLDPSSSNKV----VGSIFVS----------CSIEDPVETERSFARR 183 (644)
T ss_pred cCCCCHHHhhhheeecHhhccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHH----------hCCCCCCHHHHHHHHH
Confidence 457888999988888 89999999999999999 99999997 3333221 22 1222233 899
Q ss_pred HhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhcc
Q psy8382 182 LFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHG 251 (864)
Q Consensus 182 aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p 251 (864)
+|+.+|.|++|.|+.+||..++..+ +...+++++++ +|+.+|.|++|.|+++||.+++...+
T Consensus 184 mf~~~D~DgdG~IdfdEFl~lL~~l----g~~~seEEL~e----aFk~fDkDgdG~Is~dEL~~vL~~~~ 245 (644)
T PLN02964 184 ILAIVDYDEDGQLSFSEFSDLIKAF----GNLVAANKKEE----LFKAADLNGDGVVTIDELAALLALQQ 245 (644)
T ss_pred HHHHhCCCCCCeEcHHHHHHHHHHh----ccCCCHHHHHH----HHHHhCCCCCCcCCHHHHHHHHHhcc
Confidence 9999999999999999999999875 66678888888 99999999999999999999998864
No 27
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.64 E-value=9.9e-08 Score=86.98 Aligned_cols=70 Identities=17% Similarity=0.306 Sum_probs=56.7
Q ss_pred HHHHHHhhhhc-CCCCC-ccCHHHHHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhc
Q psy8382 177 DKIKFLFRVYD-LDGDG-LIQHKELQHVMRACME-ENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKH 250 (864)
Q Consensus 177 ekL~~aFk~fD-~dgdG-~Is~eELr~vL~~l~~-~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~ 250 (864)
..++.+|+.|| +||+| +|+.+||+.+++..+. ..+...+++++++ +++++|.|+||.|+|+||+.++...
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~----i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDK----IMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHH----HHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 57888999999 89999 5999999999976321 1122346667777 9999999999999999999998764
No 28
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.59 E-value=1.3e-07 Score=86.16 Aligned_cols=71 Identities=21% Similarity=0.366 Sum_probs=59.4
Q ss_pred HHHHHHhhhhcC-CC-CCccCHHHHHHHHHHHH-HhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhcc
Q psy8382 177 DKIKFLFRVYDL-DG-DGLIQHKELQHVMRACM-EENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHG 251 (864)
Q Consensus 177 ekL~~aFk~fD~-dg-dG~Is~eELr~vL~~l~-~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p 251 (864)
..++.+|+.||. |+ +|+|+.+||+.+|+..+ ...|..+++++++. +++.+|.+++|.|+|+||+.++....
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~----~~~~~D~~~dg~I~f~eF~~l~~~~~ 81 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDK----IMKDLDQNRDGKVNFEEFVSLVAGLS 81 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHH----HHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 679999999997 97 69999999999998621 11255678888888 99999999999999999999987643
No 29
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.58 E-value=1.9e-07 Score=84.69 Aligned_cols=72 Identities=14% Similarity=0.309 Sum_probs=59.1
Q ss_pred HHHHHHhhhhc-CCCCCc-cCHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhccc
Q psy8382 177 DKIKFLFRVYD-LDGDGL-IQHKELQHVMRA-CMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHGG 252 (864)
Q Consensus 177 ekL~~aFk~fD-~dgdG~-Is~eELr~vL~~-l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p~ 252 (864)
+.++.+|++|| +|++|+ |+.+||+.+|+. +-...+...+++++++ +|+.+|.|++|.|+|+||+.++...-.
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~----i~~~~D~d~~G~I~f~eF~~l~~~~~~ 83 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDK----IMKELDENGDGEVDFQEFVVLVAALTV 83 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHH----HHHHHCCCCCCcCcHHHHHHHHHHHHH
Confidence 67999999997 999995 999999999985 3111133457788888 999999999999999999999876543
No 30
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.57 E-value=1.6e-07 Score=84.74 Aligned_cols=69 Identities=19% Similarity=0.387 Sum_probs=59.4
Q ss_pred HHHHHHhhhhcC-CC-CCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhc
Q psy8382 177 DKIKFLFRVYDL-DG-DGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKH 250 (864)
Q Consensus 177 ekL~~aFk~fD~-dg-dG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~ 250 (864)
..+..+|..||. || +|+|+.+||+++++... ..|..++++++++ +|+.+|.|++|.|+|+||+.++...
T Consensus 10 ~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~-~lg~k~t~~ev~~----m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 10 GLLVAIFHKYSGREGDKNTLSKKELKELIQKEL-TIGSKLQDAEIAK----LMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHH-hcCCCCCHHHHHH----HHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 467889999998 77 89999999999997411 1278889999999 9999999999999999999988763
No 31
>KOG4223|consensus
Probab=98.50 E-value=1.4e-06 Score=94.09 Aligned_cols=206 Identities=12% Similarity=0.116 Sum_probs=113.7
Q ss_pred HHHHHHHHHH-HhCCcccccHHHHHHHHhhcCchhHHHhhhhhhh---cccccCCccccccccCCCCCCCCCCCCCCCCh
Q psy8382 21 LEWLEQLFRQ-TVGDEKEICRDDFKKILITKNISDLYDKVHSFVW---YSSQYGHFTPCYVHTNGFYRPSPRSGFDKGNL 96 (864)
Q Consensus 21 ~~~l~~lF~~-~~~~d~~l~~~efkkil~~~d~~dl~~k~~~~~~---is~~~~~~~~~~~~~~~~~~p~~rs~~~~~~~ 96 (864)
.+++..||.. +..+||-++..|++..+.....+-+++....... -..+..+....+...-..+.-.+....+..+.
T Consensus 76 ~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e~~ 155 (325)
T KOG4223|consen 76 QERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEEDN 155 (325)
T ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccchhc
Confidence 5788999999 5889999999999998755444344333322211 11222221111111000000001111111111
Q ss_pred HHHHHHH-------h--hhhccCcCCHHHHHhhhhhcCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHH
Q psy8382 97 EWLEQLF-------R--QTVAYTSLRIHHNLVCLPRSGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDA 166 (864)
Q Consensus 97 ~~l~~L~-------~--~~~~s~~L~~~el~~l~~~l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~ 166 (864)
.-..++. + +.++.+.++.+|+..++.=-.+.--..--|.+.... |+|+||+|+++||. .-
T Consensus 156 ~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfi----------gd 225 (325)
T KOG4223|consen 156 EEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFI----------GD 225 (325)
T ss_pred HHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHH----------hH
Confidence 1111111 0 345667888888877665222211111223444455 88888888888854 33
Q ss_pred HHHhcCCCCh-----HHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHH
Q psy8382 167 MHQFAGQSPD-----DKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYE 241 (864)
Q Consensus 167 l~~~~~~~~e-----ekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~Isfe 241 (864)
|........+ .+-..+|..+|+|+||+++.+|++.-+.-- +....+.++ +.++-++|.|+||++|++
T Consensus 226 ~~~~~~~~~epeWv~~Ere~F~~~~DknkDG~L~~dEl~~WI~P~----~~d~A~~EA----~hL~~eaD~dkD~kLs~e 297 (325)
T KOG4223|consen 226 LYSHEGNEEEPEWVLTEREQFFEFRDKNKDGKLDGDELLDWILPS----EQDHAKAEA----RHLLHEADEDKDGKLSKE 297 (325)
T ss_pred HhhccCCCCCcccccccHHHHHHHhhcCCCCccCHHHHhcccCCC----CccHHHHHH----HHHhhhhccCccccccHH
Confidence 3332222111 234578889999999999999999665421 223334444 459999999999999999
Q ss_pred HHH
Q psy8382 242 SLK 244 (864)
Q Consensus 242 EF~ 244 (864)
|-+
T Consensus 298 EIl 300 (325)
T KOG4223|consen 298 EIL 300 (325)
T ss_pred HHh
Confidence 964
No 32
>KOG0377|consensus
Probab=98.50 E-value=6.8e-07 Score=98.69 Aligned_cols=114 Identities=16% Similarity=0.264 Sum_probs=90.4
Q ss_pred HHHHHHHhh-hcCCCCcccHHHHHHHHHhHH----------------------HHHHHHHHhcCC---------------
Q psy8382 132 EWLEQLFRQ-TVGDEKEICRDDFKKILITKN----------------------EFIDAMHQFAGQ--------------- 173 (864)
Q Consensus 132 eeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~----------------------EFl~~l~~~~~~--------------- 173 (864)
.+|.+-|+. |.+++|+|+......++...- |+..-+..+..+
T Consensus 464 sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slvetLY 543 (631)
T KOG0377|consen 464 SDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRPKLANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVETLY 543 (631)
T ss_pred hHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhhccCCCcCcceehHhHHHHhhhhhHHHHHHhHHHHHHH
Confidence 467888999 999999999999999987531 222222111111
Q ss_pred CChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 174 SPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 174 ~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
.....|+.+|+..|.|++|.|+.+||+.+++.+-+.....++++++.+ +.+.+|.|+||.|++.||++.+.-
T Consensus 544 r~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~----la~~mD~NkDG~IDlNEfLeAFrl 615 (631)
T KOG0377|consen 544 RNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILE----LARSMDLNKDGKIDLNEFLEAFRL 615 (631)
T ss_pred hchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHH----HHHhhccCCCCcccHHHHHHHHhh
Confidence 112458899999999999999999999999987666667889999888 888999999999999999998864
No 33
>KOG0028|consensus
Probab=98.48 E-value=1.3e-06 Score=85.27 Aligned_cols=110 Identities=19% Similarity=0.270 Sum_probs=90.9
Q ss_pred cCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHH
Q psy8382 124 SGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHV 202 (864)
Q Consensus 124 l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~v 202 (864)
.++.+++.++++..|.. |.+++|.|+.+||+-++..+ .-....+++..+-.-+|+++.|.|+.++|+.+
T Consensus 25 ~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmral----------GFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~ 94 (172)
T KOG0028|consen 25 SELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRAL----------GFEPKKEEILKLLADVDKEGSGKITFEDFRRV 94 (172)
T ss_pred ccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHc----------CCCcchHHHHHHHHhhhhccCceechHHHHHH
Confidence 35566677888899998 99999999999986655432 23345577888888899999999999999999
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhc
Q psy8382 203 MRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKH 250 (864)
Q Consensus 203 L~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~ 250 (864)
+...+ |..-+.+++.. +|+.+|.|++|+|++.+|+.++...
T Consensus 95 mt~k~---~e~dt~eEi~~----afrl~D~D~~Gkis~~~lkrvakeL 135 (172)
T KOG0028|consen 95 MTVKL---GERDTKEEIKK----AFRLFDDDKTGKISQRNLKRVAKEL 135 (172)
T ss_pred HHHHH---hccCcHHHHHH----HHHcccccCCCCcCHHHHHHHHHHh
Confidence 88764 55558888888 9999999999999999999998774
No 34
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.47 E-value=3.2e-07 Score=77.25 Aligned_cols=62 Identities=24% Similarity=0.461 Sum_probs=54.6
Q ss_pred HHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhcc
Q psy8382 180 KFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHG 251 (864)
Q Consensus 180 ~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p 251 (864)
+.+|+.+|.|++|.|+.+|++.+++.. | +++++++. +++.+|.+++|.|+|+||+.++....
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~----g--~~~~~~~~----i~~~~d~~~~g~i~~~ef~~~~~~~~ 63 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKS----G--LPRSVLAQ----IWDLADTDKDGKLDKEEFAIAMHLIA 63 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHc----C--CCHHHHHH----HHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence 568999999999999999999999875 5 47777777 99999999999999999999887543
No 35
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.43 E-value=5.9e-07 Score=82.19 Aligned_cols=64 Identities=17% Similarity=0.356 Sum_probs=57.5
Q ss_pred HHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhc
Q psy8382 177 DKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKH 250 (864)
Q Consensus 177 ekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~ 250 (864)
+.++.+|+.||.|++|+|+.+|++.+++.. | +++++++. +++.+|.+++|.|+|+||+.++...
T Consensus 10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~~----~--~~~~ev~~----i~~~~d~~~~g~I~~~eF~~~~~~~ 73 (96)
T smart00027 10 AKYEQIFRSLDKNQDGTVTGAQAKPILLKS----G--LPQTLLAK----IWNLADIDNDGELDKDEFALAMHLI 73 (96)
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHHc----C--CCHHHHHH----HHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 679999999999999999999999999874 4 67888887 9999999999999999999988753
No 36
>KOG0037|consensus
Probab=98.43 E-value=1.4e-05 Score=82.07 Aligned_cols=158 Identities=14% Similarity=0.229 Sum_probs=115.1
Q ss_pred HHHHHHHHH-HhCCcccccHHHHHHHHhhcCchhH-HHhhhhhhhcccccCCccccccccCCCCCCCCCCCCCCCChHHH
Q psy8382 22 EWLEQLFRQ-TVGDEKEICRDDFKKILITKNISDL-YDKVHSFVWYSSQYGHFTPCYVHTNGFYRPSPRSGFDKGNLEWL 99 (864)
Q Consensus 22 ~~l~~lF~~-~~~~d~~l~~~efkkil~~~d~~dl-~~k~~~~~~is~~~~~~~~~~~~~~~~~~p~~rs~~~~~~~~~l 99 (864)
..+...|.+ +++..+.|+.+|++++|....-+-+ ++-+ ..+
T Consensus 57 ~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~Tc-------------------------------------rlm 99 (221)
T KOG0037|consen 57 PQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETC-------------------------------------RLM 99 (221)
T ss_pred HHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHH-------------------------------------HHH
Confidence 467788888 5888899999999998642211000 0000 112
Q ss_pred HHHHhhhhccCcCCHHHHHhhhhhcCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHH
Q psy8382 100 EQLFRQTVAYTSLRIHHNLVCLPRSGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDK 178 (864)
Q Consensus 100 ~~L~~~~~~s~~L~~~el~~l~~~l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eek 178 (864)
-.++ +....+++...|+..+=+ -++..+.+|.. |.|++|.|+..||+++|..+ .-.-.++-
T Consensus 100 I~mf-d~~~~G~i~f~EF~~Lw~-------~i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~----------Gy~Lspq~ 161 (221)
T KOG0037|consen 100 ISMF-DRDNSGTIGFKEFKALWK-------YINQWRNVFRTYDRDRSGTIDSSELRQALTQL----------GYRLSPQF 161 (221)
T ss_pred HHHh-cCCCCCccCHHHHHHHHH-------HHHHHHHHHHhcccCCCCcccHHHHHHHHHHc----------CcCCCHHH
Confidence 2233 345567777777777765 46788899999 99999999999988877543 33345677
Q ss_pred HHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcc--eeHHHHHHHHH
Q psy8382 179 IKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGA--ITYESLKNQLE 248 (864)
Q Consensus 179 L~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~--IsfeEF~~~l~ 248 (864)
+..+++.||..++|.|..++|-+.+..+ ..+-+ .|++.|.+.+|. |+|++|+.+..
T Consensus 162 ~~~lv~kyd~~~~g~i~FD~FI~ccv~L----------~~lt~----~Fr~~D~~q~G~i~~~y~dfl~~t~ 219 (221)
T KOG0037|consen 162 YNLLVRKYDRFGGGRIDFDDFIQCCVVL----------QRLTE----AFRRRDTAQQGSITISYDDFLQMTM 219 (221)
T ss_pred HHHHHHHhccccCCceeHHHHHHHHHHH----------HHHHH----HHHHhccccceeEEEeHHHHHHHhh
Confidence 8889999999999999999999988765 22334 799999999887 58999998754
No 37
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.43 E-value=6e-07 Score=80.61 Aligned_cols=70 Identities=19% Similarity=0.326 Sum_probs=57.4
Q ss_pred HHHHHHhhhhcC--CCCCccCHHHHHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhc
Q psy8382 177 DKIKFLFRVYDL--DGDGLIQHKELQHVMRACMEE-NGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKH 250 (864)
Q Consensus 177 ekL~~aFk~fD~--dgdG~Is~eELr~vL~~l~~~-~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~ 250 (864)
+.++.+|+.||. |++|+|+.+||+.+++..+.. .+...++++++. ++..+|.+++|.|+|+||+.++...
T Consensus 8 ~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~----i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 8 ETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDK----IMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHH----HHHHhccCCCCcCcHHHHHHHHHHH
Confidence 568899999999 899999999999999863210 112245777777 9999999999999999999998764
No 38
>KOG0034|consensus
Probab=98.40 E-value=1.6e-06 Score=88.75 Aligned_cols=147 Identities=20% Similarity=0.253 Sum_probs=96.5
Q ss_pred CCCCcccHHHHHHHHHH-HhC-CcccccHHHHHHHHhhcCchhHHHhhhhhhhcccccCCccccccccCCCCCCCCCCCC
Q psy8382 14 SGFDKGNLEWLEQLFRQ-TVG-DEKEICRDDFKKILITKNISDLYDKVHSFVWYSSQYGHFTPCYVHTNGFYRPSPRSGF 91 (864)
Q Consensus 14 ~~~~~~~~~~l~~lF~~-~~~-~d~~l~~~efkkil~~~d~~dl~~k~~~~~~is~~~~~~~~~~~~~~~~~~p~~rs~~ 91 (864)
+-++..+.++|.++|.+ +.. ++|.++.+||..+. ......+.+++...+.
T Consensus 25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~-~~~~Np~~~rI~~~f~--------------------------- 76 (187)
T KOG0034|consen 25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIP-ELALNPLADRIIDRFD--------------------------- 76 (187)
T ss_pred cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHH-HHhcCcHHHHHHHHHh---------------------------
Confidence 33888899999999999 455 88999999999985 2111122222221111
Q ss_pred CCCChHHHHHHHhhhhccCc-CCHHHHHhhhhhcCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHH
Q psy8382 92 DKGNLEWLEQLFRQTVAYTS-LRIHHNLVCLPRSGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQ 169 (864)
Q Consensus 92 ~~~~~~~l~~L~~~~~~s~~-L~~~el~~l~~~l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~ 169 (864)
..+.+. ++.+++-.+.....-.....++++=.|+. |.+++|.|+++|+..++... +-.....
T Consensus 77 --------------~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~--~~~~~~~ 140 (187)
T KOG0034|consen 77 --------------TDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMM--VGENDDM 140 (187)
T ss_pred --------------ccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH--HccCCcc
Confidence 112222 55555555555433333344578888888 99999999999998877654 1000000
Q ss_pred hcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHH
Q psy8382 170 FAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRA 205 (864)
Q Consensus 170 ~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~ 205 (864)
.....++.+...|..+|.|+||+|+.+|+++++..
T Consensus 141 -~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 141 -SDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEK 175 (187)
T ss_pred -hHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 01112356788999999999999999999999875
No 39
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.36 E-value=8e-07 Score=84.25 Aligned_cols=64 Identities=25% Similarity=0.396 Sum_probs=53.3
Q ss_pred hHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhcc
Q psy8382 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHG 251 (864)
Q Consensus 176 eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p 251 (864)
..++.++|..+|.|+||+|+.+||..+. + + ..+..++. +|+.+|.|+||.||++||..++.+..
T Consensus 47 ~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l----~--~~e~~~~~----f~~~~D~n~Dg~IS~~Ef~~cl~~~~ 110 (116)
T cd00252 47 KDPVGWMFNQLDGNYDGKLSHHELAPIR--L----D--PNEHCIKP----FFESCDLDKDGSISLDEWCYCFIKED 110 (116)
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHH--c----c--chHHHHHH----HHHHHCCCCCCCCCHHHHHHHHhChh
Confidence 3789999999999999999999999876 2 1 23444555 99999999999999999999995543
No 40
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.33 E-value=1.8e-06 Score=69.97 Aligned_cols=61 Identities=33% Similarity=0.666 Sum_probs=55.4
Q ss_pred HHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHH
Q psy8382 179 IKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQL 247 (864)
Q Consensus 179 L~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l 247 (864)
++.+|+.+|.|++|.|+.+|+..++..+ +...+.+.+.. +++.+|.+++|.|+++||+.++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~----~~~~~~~~~~~----~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSL----GEGLSEEEIDE----MIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHh----CCCCCHHHHHH----HHHHhCCCCCCeEeHHHHHHHh
Confidence 6788999999999999999999999986 77788888887 8999999999999999998765
No 41
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.31 E-value=2e-06 Score=77.88 Aligned_cols=70 Identities=16% Similarity=0.296 Sum_probs=56.9
Q ss_pred HHHHHHhhh-hcCCCCC-ccCHHHHHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhc
Q psy8382 177 DKIKFLFRV-YDLDGDG-LIQHKELQHVMRACMEE-NGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKH 250 (864)
Q Consensus 177 ekL~~aFk~-fD~dgdG-~Is~eELr~vL~~l~~~-~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~ 250 (864)
..+..+|+. +|+||+| +|+.+||+.++..-+.. .+...++.++++ +++.+|.|+||.|+|+||+.++...
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~----ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDR----MMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHH----HHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 578899999 7898987 99999999999874211 122445677777 9999999999999999999988753
No 42
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.29 E-value=1.8e-06 Score=70.16 Aligned_cols=52 Identities=27% Similarity=0.643 Sum_probs=47.5
Q ss_pred CCCccCHHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 190 GDGLIQHKELQHVMRACMEENGMQ-FSEEQIDHLTMALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 190 gdG~Is~eELr~vL~~l~~~~g~~-ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
.+|.|+.+||+.+|..+ |.. +++++++. +|..+|.|++|.|+|+||+.++.+
T Consensus 1 ~~G~i~~~~~~~~l~~~----g~~~~s~~e~~~----l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKL----GIKDLSEEEVDR----LFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHT----TSSSSCHHHHHH----HHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHh----CCCCCCHHHHHH----HHHhcccCCCCCCCHHHHHHHHHh
Confidence 47999999999999665 888 99999998 999999999999999999999864
No 43
>KOG1929|consensus
Probab=98.26 E-value=1.1e-06 Score=106.27 Aligned_cols=100 Identities=31% Similarity=0.485 Sum_probs=88.7
Q ss_pred hhhcccCCCcceehhhhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecCCChhhhhHhhhcCCceechhhHHHHH
Q psy8382 503 LYACLSSKPHVVTVEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPTCSGSKYNAALKWGFPSVNKKWLLECA 582 (864)
Q Consensus 503 l~r~v~S~s~v~~~er~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~~sg~Kw~~A~~w~ipvVt~~WL~~c~ 582 (864)
+-.|..+.+...+.++..+..++..+|+...+.|.++. +||+|++..|.+|.+|.+|+||+||.+||.+|+
T Consensus 494 ~e~~~~~~s~~~~~~~e~ln~~~~~~gas~~~~f~r~~---------~~l~~~~~k~s~~~~~~kw~ip~vT~~wL~e~~ 564 (811)
T KOG1929|consen 494 FENLTISNSQSAEAEREKLNNLANDLGASNVKTFTRKS---------TTLLTTSAKGSKYEIAGKWSIPIVTPDWLYECV 564 (811)
T ss_pred ccCceEEeeechHHHHHHHhHhhhhccccccceeeecc---------cEEeccccccchhhhccccCCCccChhHHHhhc
Confidence 45777778888888999999999999999999999876 899999999999999999999999999999999
Q ss_pred HhCCCcCCCccccCCCcccCCCCCCCCCc
Q psy8382 583 RTGKRVSEQQYLTGSDEASQNVGSQSNGF 611 (864)
Q Consensus 583 ~~~~~~~e~~y~~~~~~~~~~~~~~~~~~ 611 (864)
++++..+.+.|+.+..-+++++...+...
T Consensus 565 rq~~~~~~e~~l~~~st~~e~~~~~~~~~ 593 (811)
T KOG1929|consen 565 RQNKGERNEGFLNGNSTAKERPISPSIRF 593 (811)
T ss_pred cccCcccceeeccccccccccCccccccc
Confidence 99999999999999887776655554433
No 44
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.23 E-value=8.5e-07 Score=74.94 Aligned_cols=65 Identities=25% Similarity=0.522 Sum_probs=49.5
Q ss_pred HHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHH
Q psy8382 133 WLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVM 203 (864)
Q Consensus 133 eL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL 203 (864)
+|+++|+. |.|++|.|+.+||..++.... ........++.+..+|+.+|.|+||.|+.+||..++
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~------~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLG------RDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTT------SHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhc------ccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 46789999 999999999999888775431 000011223567788999999999999999998864
No 45
>KOG2643|consensus
Probab=98.15 E-value=1.4e-05 Score=88.91 Aligned_cols=127 Identities=19% Similarity=0.277 Sum_probs=81.2
Q ss_pred hhhccCcCCHHHHHhhhhhcCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHh
Q psy8382 105 QTVAYTSLRIHHNLVCLPRSGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLF 183 (864)
Q Consensus 105 ~~~~s~~L~~~el~~l~~~l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aF 183 (864)
-.++.++|+.+++.++++.+ +.+-+.--|.. |...+|.|+..+|...+... +.......+..++.+=
T Consensus 296 G~rg~~kLs~deF~~F~e~L-----q~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~-------a~~n~~~k~~~lkrvk 363 (489)
T KOG2643|consen 296 GKRGNGKLSIDEFLKFQENL-----QEEILELEFERFDKGDSGAISEVDFAELLLAY-------AGVNSKKKHKYLKRVK 363 (489)
T ss_pred ccCCCccccHHHHHHHHHHH-----HHHHHHHHHHHhCcccccccCHHHHHHHHHHH-------cccchHhHHHHHHHHH
Confidence 45778899999999999865 33555666888 88888999999998876321 0000001111222222
Q ss_pred hhhcCC-------------------------------CCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcC
Q psy8382 184 RVYDLD-------------------------------GDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADS 232 (864)
Q Consensus 184 k~fD~d-------------------------------gdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~ 232 (864)
+.|+.+ ..+.|+..+|+++.... .|..+++..+ |.+|.-+|.
T Consensus 364 ~kf~~~~~gISl~Ef~~Ff~Fl~~l~dfd~Al~fy~~Ag~~i~~~~f~raa~~v---tGveLSdhVv----dvvF~IFD~ 436 (489)
T KOG2643|consen 364 EKFKDDGKGISLQEFKAFFRFLNNLNDFDIALRFYHMAGASIDEKTFQRAAKVV---TGVELSDHVV----DVVFTIFDE 436 (489)
T ss_pred HhccCCCCCcCHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCHHHHHHHHHHh---cCccccccee----eeEEEEEcc
Confidence 223322 34455555555555543 3555555433 348888999
Q ss_pred CCCcceeHHHHHHHHHhc
Q psy8382 233 ENRGAITYESLKNQLEKH 250 (864)
Q Consensus 233 d~dG~IsfeEF~~~l~~~ 250 (864)
|+||.++.+||+.+|.+.
T Consensus 437 N~Dg~LS~~EFl~Vmk~R 454 (489)
T KOG2643|consen 437 NNDGTLSHKEFLAVMKRR 454 (489)
T ss_pred CCCCcccHHHHHHHHHHH
Confidence 999999999999998763
No 46
>KOG0044|consensus
Probab=98.15 E-value=8.9e-06 Score=83.51 Aligned_cols=145 Identities=17% Similarity=0.253 Sum_probs=91.3
Q ss_pred CCCCCcccHHHHHHHHHHHhCCcccccHHHHHHHHhh----cCchhHHHhhhhhhhcccccCCccccccccCCCCCCCCC
Q psy8382 13 RSGFDKGNLEWLEQLFRQTVGDEKEICRDDFKKILIT----KNISDLYDKVHSFVWYSSQYGHFTPCYVHTNGFYRPSPR 88 (864)
Q Consensus 13 ~~~~~~~~~~~l~~lF~~~~~~d~~l~~~efkkil~~----~d~~dl~~k~~~~~~is~~~~~~~~~~~~~~~~~~p~~r 88 (864)
++.+++.++..+.+=|++.+ ..|.++.++|++++.. .|++.+.+.++...+
T Consensus 20 ~t~f~~~ei~~~Yr~Fk~~c-P~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD------------------------ 74 (193)
T KOG0044|consen 20 QTKFSKKEIQQWYRGFKNEC-PSGRLTLEEFREIYASFFPDGDASKYAELVFRTFD------------------------ 74 (193)
T ss_pred hcCCCHHHHHHHHHHhcccC-CCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhc------------------------
Confidence 46677776666666666644 3589999999998633 444343444333322
Q ss_pred CCCCCCChHHHHHHHhhhhccCcCCHHHHHhhhh-hc-CCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHH
Q psy8382 89 SGFDKGNLEWLEQLFRQTVAYTSLRIHHNLVCLP-RS-GFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFID 165 (864)
Q Consensus 89 s~~~~~~~~~l~~L~~~~~~s~~L~~~el~~l~~-~l-~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~ 165 (864)
.+..+.++..|+-.... .. |-.. +.+.=.|+. |.|++|.|+++|+..++... ..
T Consensus 75 -----------------~~~dg~i~F~Efi~als~~~rGt~e---ekl~w~F~lyD~dgdG~It~~Eml~iv~~i---~~ 131 (193)
T KOG0044|consen 75 -----------------KNKDGTIDFLEFICALSLTSRGTLE---EKLKWAFRLYDLDGDGYITKEEMLKIVQAI---YQ 131 (193)
T ss_pred -----------------ccCCCCcCHHHHHHHHHHHcCCcHH---HHhhhhheeecCCCCceEcHHHHHHHHHHH---HH
Confidence 23334444444222111 11 2222 344455888 99999999999998877654 11
Q ss_pred HHHH----hcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHH
Q psy8382 166 AMHQ----FAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRA 205 (864)
Q Consensus 166 ~l~~----~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~ 205 (864)
.+.. .....+++....+|+.+|.|+||.||.+||...+..
T Consensus 132 m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 132 MTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA 175 (193)
T ss_pred HcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence 1111 112345678999999999999999999999988875
No 47
>PLN02964 phosphatidylserine decarboxylase
Probab=98.11 E-value=1.4e-05 Score=95.56 Aligned_cols=79 Identities=18% Similarity=0.323 Sum_probs=65.0
Q ss_pred HHhhhhhcC-CCHHHHH--HHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCC
Q psy8382 117 NLVCLPRSG-FDKGNLE--WLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDG 192 (864)
Q Consensus 117 l~~l~~~l~-fs~~eie--eL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG 192 (864)
+..+.+.+| +++.+.+ .+.++|.. |.|++|.|+++||..++. .+.....+++++.+|+.||+|++|
T Consensus 161 Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~----------~lg~~~seEEL~eaFk~fDkDgdG 230 (644)
T PLN02964 161 VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIK----------AFGNLVAANKKEELFKAADLNGDG 230 (644)
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH----------HhccCCCHHHHHHHHHHhCCCCCC
Confidence 777888888 3554433 58999999 999999999999766553 334456788999999999999999
Q ss_pred ccCHHHHHHHHHH
Q psy8382 193 LIQHKELQHVMRA 205 (864)
Q Consensus 193 ~Is~eELr~vL~~ 205 (864)
+|+.+||++++..
T Consensus 231 ~Is~dEL~~vL~~ 243 (644)
T PLN02964 231 VVTIDELAALLAL 243 (644)
T ss_pred cCCHHHHHHHHHh
Confidence 9999999999987
No 48
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.07 E-value=9.6e-06 Score=73.18 Aligned_cols=67 Identities=21% Similarity=0.402 Sum_probs=55.5
Q ss_pred HHHHHHhhhhcCC--CCCccCHHHHHHHHHHHHHhcCCCCC----HHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhc
Q psy8382 177 DKIKFLFRVYDLD--GDGLIQHKELQHVMRACMEENGMQFS----EEQIDHLTMALFEDADSENRGAITYESLKNQLEKH 250 (864)
Q Consensus 177 ekL~~aFk~fD~d--gdG~Is~eELr~vL~~l~~~~g~~ls----~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~ 250 (864)
..+...|..|+.+ ++|+|+.+||+.+|...+ |..++ +++++. +|+.+|.|++|.|+|+||+.++...
T Consensus 8 ~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~---g~~~t~~~~~~~v~~----i~~~~D~d~dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 8 ETIINVFHQYSVRKGHPDTLYKKEFKQLVEKEL---PNFLKKEKNQKAIDK----IFEDLDTNQDGQLSFEEFLVLVIKV 80 (88)
T ss_pred HHHHHHHHHHhccCCCcccCCHHHHHHHHHHHh---hHhhccCCCHHHHHH----HHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 5678889999866 479999999999997432 44454 777777 9999999999999999999998753
No 49
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.02 E-value=2.2e-05 Score=71.76 Aligned_cols=80 Identities=20% Similarity=0.345 Sum_probs=64.7
Q ss_pred CCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHH
Q psy8382 125 GFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVM 203 (864)
Q Consensus 125 ~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL 203 (864)
.++.++++++.+.|.. |.|++|.|+.+|++.++... +..++.+..+|+.+|.+++|+|+.+||..++
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~------------~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~ 70 (96)
T smart00027 3 AISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKS------------GLPQTLLAKIWNLADIDNDGELDKDEFALAM 70 (96)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHc------------CCCHHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 3567789999999999 99999999999988766421 3456789999999999999999999999998
Q ss_pred HHHHH-hcCCCCCH
Q psy8382 204 RACME-ENGMQFSE 216 (864)
Q Consensus 204 ~~l~~-~~g~~ls~ 216 (864)
..+.. ..|..++.
T Consensus 71 ~~~~~~~~g~~~~~ 84 (96)
T smart00027 71 HLIYRKLNGYPIPA 84 (96)
T ss_pred HHHHHHHcCCCCCc
Confidence 87532 23555544
No 50
>PF14658 EF-hand_9: EF-hand domain
Probab=98.00 E-value=1.8e-05 Score=66.99 Aligned_cols=61 Identities=20% Similarity=0.412 Sum_probs=55.7
Q ss_pred HHhhhhcCCCCCccCHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHhcCCCC-cceeHHHHHHHHHh
Q psy8382 181 FLFRVYDLDGDGLIQHKELQHVMRACMEENGM-QFSEEQIDHLTMALFEDADSENR-GAITYESLKNQLEK 249 (864)
Q Consensus 181 ~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~-~ls~e~i~~iv~~if~~~D~d~d-G~IsfeEF~~~l~~ 249 (864)
.+|++||.++.|.|...++..+|+.+ +. ..++.++++ +..++|+++. |.|+|++|+.+|++
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~----~~~~p~e~~Lq~----l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAV----TGRSPEESELQD----LINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHH----cCCCCcHHHHHH----HHHHhCCCCCCceEeHHHHHHHHHH
Confidence 37999999999999999999999997 54 788889999 9999999888 99999999999875
No 51
>PF00533 BRCT: BRCA1 C Terminus (BRCT) domain; InterPro: IPR001357 The BRCT domain (after the C_terminal domain of a breast cancer susceptibility protein) is found predominantly in proteins involved in cell cycle checkpoint functions responsive to DNA damage [], for example as found in the breast cancer DNA-repair protein BRCA1. The domain is an approximately 100 amino acid tandem repeat, which appears to act as a phospho-protein binding domain []. A chitin biosynthesis protein from yeast also seems to belong to this group. ; GO: 0005622 intracellular; PDB: 3L46_A 3AL3_A 3AL2_A 1WF6_A 3II6_X 2NTE_B 3FA2_A 2R1Z_A 2COK_A 2K7F_A ....
Probab=97.99 E-value=5.9e-06 Score=71.52 Aligned_cols=63 Identities=25% Similarity=0.430 Sum_probs=54.9
Q ss_pred CcceehhhhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecCC--ChhhhhHhhhcCCceechhhHHHHH
Q psy8382 511 PHVVTVEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPTC--SGSKYNAALKWGFPSVNKKWLLECA 582 (864)
Q Consensus 511 s~v~~~er~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~~--sg~Kw~~A~~w~ipvVt~~WL~~c~ 582 (864)
.+....++..+..+++.+||.+.....++. +|++|... ...++..|..+++|+|+.+||.+|+
T Consensus 14 ~~~~~~~~~~l~~~i~~~GG~v~~~~~~~~---------thvI~~~~~~~~~k~~~~~~~~i~iV~~~Wi~~ci 78 (78)
T PF00533_consen 14 SGFDSDEREELEQLIKKHGGTVSNSFSKKT---------THVIVGNPNKRTKKYKAAIANGIPIVSPDWIEDCI 78 (78)
T ss_dssp SSTSSSHHHHHHHHHHHTTEEEESSSSTTS---------SEEEESSSHCCCHHHHHHHHTTSEEEETHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHcCCEEEeecccCc---------EEEEeCCCCCccHHHHHHHHCCCeEecHHHHHHhC
Confidence 445677788899999999999977655544 89999988 8999999999999999999999997
No 52
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=97.92 E-value=3.7e-05 Score=69.59 Aligned_cols=67 Identities=16% Similarity=0.369 Sum_probs=57.3
Q ss_pred HHHHHHHHHhh-hc-CCCCcccHHHHHHHHHh-HHHHHHHHHHhcCCCCh-HHHHHHhhhhcCCCCCccCHHHHHHHHHH
Q psy8382 130 NLEWLEQLFRQ-TV-GDEKEICRDDFKKILIT-KNEFIDAMHQFAGQSPD-DKIKFLFRVYDLDGDGLIQHKELQHVMRA 205 (864)
Q Consensus 130 eieeL~~~F~~-D~-d~dG~I~~eEF~~~l~~-~~EFl~~l~~~~~~~~e-ekL~~aFk~fD~dgdG~Is~eELr~vL~~ 205 (864)
.+..|.+.|.. |. +++|.|+.+||+.++.. +++++ .+ +.+..+|+.+|.|+||.|+++||..++..
T Consensus 6 ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~l----------s~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 6 AIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLL----------KDVEGLEEKMKNLDVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhc----------cCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 56789999999 99 99999999999998876 43332 22 78999999999999999999999999887
Q ss_pred H
Q psy8382 206 C 206 (864)
Q Consensus 206 l 206 (864)
+
T Consensus 76 l 76 (89)
T cd05022 76 L 76 (89)
T ss_pred H
Confidence 6
No 53
>cd00027 BRCT Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo/hetero BRCT multimers, BRCT-non-BRCT interactions, and interactions within DNA strand breaks.
Probab=97.84 E-value=1.6e-05 Score=66.32 Aligned_cols=60 Identities=30% Similarity=0.541 Sum_probs=51.0
Q ss_pred ehhhhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecCCChhh-hhHhhhcCCceechhhHHHHHH
Q psy8382 515 TVEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPTCSGSK-YNAALKWGFPSVNKKWLLECAR 583 (864)
Q Consensus 515 ~~er~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~~sg~K-w~~A~~w~ipvVt~~WL~~c~~ 583 (864)
..++..+.++++.+||.+....... .||+|++.....+ +..|..+++|+|+.+||.+|++
T Consensus 12 ~~~~~~l~~~i~~~Gg~v~~~~~~~---------~thvI~~~~~~~~~~~~~~~~~~~iV~~~Wi~~~~~ 72 (72)
T cd00027 12 SEERDELKELIEKLGGKVTSSVSKK---------TTHVIVGSDAGPKKLLKAIKLGIPIVTPEWLLDCLK 72 (72)
T ss_pred CcCHHHHHHHHHHcCCEEeccccCC---------ceEEEECCCCCchHHHHHHHcCCeEecHHHHHHHhC
Confidence 5667888999999999888764433 3999999988766 8899999999999999999984
No 54
>KOG0041|consensus
Probab=97.83 E-value=3.6e-05 Score=77.79 Aligned_cols=65 Identities=22% Similarity=0.445 Sum_probs=57.3
Q ss_pred HHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 177 DKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 177 ekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
..+..+|+.||.|.||+|+..||+.+|..+ |..-+.--++. |++++|.|.||+|+|-||+-++..
T Consensus 99 k~~~~~Fk~yDe~rDgfIdl~ELK~mmEKL----gapQTHL~lK~----mikeVded~dgklSfreflLIfrk 163 (244)
T KOG0041|consen 99 KDAESMFKQYDEDRDGFIDLMELKRMMEKL----GAPQTHLGLKN----MIKEVDEDFDGKLSFREFLLIFRK 163 (244)
T ss_pred HHHHHHHHHhcccccccccHHHHHHHHHHh----CCchhhHHHHH----HHHHhhcccccchhHHHHHHHHHH
Confidence 567889999999999999999999999987 76555556666 999999999999999999988865
No 55
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=97.76 E-value=0.00014 Score=66.25 Aligned_cols=71 Identities=13% Similarity=0.285 Sum_probs=56.3
Q ss_pred HHHHHHHHHhh-h-cCCCC-cccHHHHHHHHHhHHHHHHHHH-HhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHH
Q psy8382 130 NLEWLEQLFRQ-T-VGDEK-EICRDDFKKILITKNEFIDAMH-QFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRA 205 (864)
Q Consensus 130 eieeL~~~F~~-D-~d~dG-~I~~eEF~~~l~~~~EFl~~l~-~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~ 205 (864)
-+..+.+.|.. | .|++| +|+.+||+.++... +. .+.....++.+..+++.+|.|+||.|+.+||..++..
T Consensus 8 a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~------~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~ 81 (93)
T cd05026 8 AMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRE------LTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAA 81 (93)
T ss_pred HHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHH------hHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 45678888998 5 89998 59999999877542 11 1122335678999999999999999999999999987
Q ss_pred H
Q psy8382 206 C 206 (864)
Q Consensus 206 l 206 (864)
+
T Consensus 82 l 82 (93)
T cd05026 82 L 82 (93)
T ss_pred H
Confidence 6
No 56
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.74 E-value=2.6e-05 Score=55.55 Aligned_cols=28 Identities=39% Similarity=0.736 Sum_probs=26.0
Q ss_pred HHHHHhhhhcCCCCCccCHHHHHHHHHH
Q psy8382 178 KIKFLFRVYDLDGDGLIQHKELQHVMRA 205 (864)
Q Consensus 178 kL~~aFk~fD~dgdG~Is~eELr~vL~~ 205 (864)
+++.+|+.||+|+||+|+.+||..+++.
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 4788999999999999999999999975
No 57
>KOG4223|consensus
Probab=97.64 E-value=0.00026 Score=76.77 Aligned_cols=109 Identities=17% Similarity=0.261 Sum_probs=68.5
Q ss_pred HHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHH-HHhcCC-CC------hHHHHHHhhhhcCCCCCccCHHHHHHH
Q psy8382 132 EWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAM-HQFAGQ-SP------DDKIKFLFRVYDLDGDGLIQHKELQHV 202 (864)
Q Consensus 132 eeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l-~~~~~~-~~------eekL~~aFk~fD~dgdG~Is~eELr~v 202 (864)
++..+.+.. |.|.||.|+++|....+.... .. ...... .. -.+-+.-|+.-|.|+||.+|.+||..+
T Consensus 113 ~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~----~~~~~~~d~e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aF 188 (325)
T KOG4223|consen 113 EEAARRWDEYDKNKDGFITWEEYLPQTYGRV----DLPDEFPDEEDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAF 188 (325)
T ss_pred HHHHHHHHHhccCccceeeHHHhhhhhhhcc----cCccccccchhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhc
Confidence 344555555 677777777777554432110 00 000000 00 023566799999999999999999998
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhcc
Q psy8382 203 MRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHG 251 (864)
Q Consensus 203 L~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p 251 (864)
|.-= -.+.+.+ -++...+...|.|+||+|+++||+.-|-.+.
T Consensus 189 LHPE---e~p~M~~----iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~ 230 (325)
T KOG4223|consen 189 LHPE---EHPHMKD----IVIAETLEDIDKNGDGKISLEEFIGDLYSHE 230 (325)
T ss_pred cChh---hcchHHH----HHHHHHHhhcccCCCCceeHHHHHhHHhhcc
Confidence 8531 0112222 2334488999999999999999998876654
No 58
>KOG0031|consensus
Probab=97.62 E-value=0.00015 Score=70.66 Aligned_cols=61 Identities=23% Similarity=0.500 Sum_probs=55.4
Q ss_pred HHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 177 DKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 177 ekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
++++++|.+.|.|+||.|.+++|++++.++ |...++++++. |++++ .|-|+|--|+.++-.
T Consensus 32 qEfKEAF~~mDqnrDG~IdkeDL~d~~aSl----Gk~~~d~elDa----M~~Ea----~gPINft~FLTmfGe 92 (171)
T KOG0031|consen 32 QEFKEAFNLMDQNRDGFIDKEDLRDMLASL----GKIASDEELDA----MMKEA----PGPINFTVFLTMFGE 92 (171)
T ss_pred HHHHHHHHHHhccCCCcccHHHHHHHHHHc----CCCCCHHHHHH----HHHhC----CCCeeHHHHHHHHHH
Confidence 678999999999999999999999999997 88899999999 88885 478999999998855
No 59
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=97.61 E-value=0.00017 Score=60.58 Aligned_cols=60 Identities=22% Similarity=0.359 Sum_probs=50.3
Q ss_pred HHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHH
Q psy8382 135 EQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRAC 206 (864)
Q Consensus 135 ~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l 206 (864)
++.|.. |.|++|.|+.+|+..++... +..++.+..+|+.+|.+++|.|+.+||..++..+
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~------------g~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKS------------GLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHc------------CCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 467888 89999999999988766422 2366789999999999999999999999988765
No 60
>KOG4251|consensus
Probab=97.60 E-value=0.00025 Score=73.66 Aligned_cols=74 Identities=22% Similarity=0.263 Sum_probs=54.8
Q ss_pred CChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHH
Q psy8382 174 SPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACME-ENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQL 247 (864)
Q Consensus 174 ~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~-~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l 247 (864)
....-++.+.+.||+|||..++..||-...-..+. ..|.++.+-..+...+.+-+..|.|.||.+|++|....+
T Consensus 233 mLrfmVkeivrdlDqdgDkqlSvpeFislpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~y~ 307 (362)
T KOG4251|consen 233 MLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYV 307 (362)
T ss_pred hHHHHHHHHHHHhccCCCeeecchhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhc
Confidence 33456788899999999999999999875543222 235556655555555557777899999999999988774
No 61
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=97.57 E-value=0.00031 Score=62.98 Aligned_cols=73 Identities=16% Similarity=0.398 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHhh-hc--CCCCcccHHHHHHHHHhHHHHHHHHHH-hcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHH
Q psy8382 128 KGNLEWLEQLFRQ-TV--GDEKEICRDDFKKILITKNEFIDAMHQ-FAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVM 203 (864)
Q Consensus 128 ~~eieeL~~~F~~-D~--d~dG~I~~eEF~~~l~~~~EFl~~l~~-~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL 203 (864)
+++++.+.+.|.. |. |++|.|+.+||..++... +.. +......+.+..+|+.+|.+++|.|+.+||..++
T Consensus 4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~------~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~ 77 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETE------LPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLI 77 (88)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHH------hhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHH
Confidence 3477889999999 99 899999999998876431 000 1112346789999999999999999999999988
Q ss_pred HHH
Q psy8382 204 RAC 206 (864)
Q Consensus 204 ~~l 206 (864)
...
T Consensus 78 ~~~ 80 (88)
T cd00213 78 GKL 80 (88)
T ss_pred HHH
Confidence 764
No 62
>KOG0036|consensus
Probab=97.55 E-value=0.00057 Score=76.12 Aligned_cols=101 Identities=20% Similarity=0.303 Sum_probs=81.7
Q ss_pred CCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCC-CChHHHHHHhhhhcCCCCCccCHHHHHHHH
Q psy8382 126 FDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQ-SPDDKIKFLFRVYDLDGDGLIQHKELQHVM 203 (864)
Q Consensus 126 fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~-~~eekL~~aFk~fD~dgdG~Is~eELr~vL 203 (864)
.+++-..++..+|+. |.+++|.++..++.+.+. .+... ...+-...+|+..|.|.||.++.+||++.+
T Consensus 8 ~~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~----------~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~ 77 (463)
T KOG0036|consen 8 TDEERDIRIRCLFKELDSKNDGQVDLDQLEKGLE----------KLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYL 77 (463)
T ss_pred CcHHHHHHHHHHHHHhccCCCCceeHHHHHHHHH----------hcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHH
Confidence 344445678899999 999999999999766553 22333 456788999999999999999999999998
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 204 RACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 204 ~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
... +.++-. +|...|.++||.|+.+|..+.+..
T Consensus 78 ~~~---------E~~l~~----~F~~iD~~hdG~i~~~Ei~~~l~~ 110 (463)
T KOG0036|consen 78 DNK---------ELELYR----IFQSIDLEHDGKIDPNEIWRYLKD 110 (463)
T ss_pred HHh---------HHHHHH----HHhhhccccCCccCHHHHHHHHHH
Confidence 762 445555 999999999999999998888766
No 63
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=97.54 E-value=0.00049 Score=62.35 Aligned_cols=73 Identities=15% Similarity=0.325 Sum_probs=57.2
Q ss_pred HHHHHHHHHHhh--hcCCCC-cccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHH
Q psy8382 129 GNLEWLEQLFRQ--TVGDEK-EICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRA 205 (864)
Q Consensus 129 ~eieeL~~~F~~--D~d~dG-~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~ 205 (864)
+.+..|...|.. |.|++| .|+.+||+.++... +-..+ .....+..+..+++.+|.|+||.|+.+||..++..
T Consensus 6 ~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e--~~~~~---~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 6 RCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTE--LASFT---KNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHh--hhHhh---cCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 356788899988 778876 99999999888654 11111 23345678999999999999999999999998887
Q ss_pred H
Q psy8382 206 C 206 (864)
Q Consensus 206 l 206 (864)
+
T Consensus 81 l 81 (89)
T cd05023 81 L 81 (89)
T ss_pred H
Confidence 5
No 64
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=97.54 E-value=0.00046 Score=62.61 Aligned_cols=72 Identities=22% Similarity=0.436 Sum_probs=56.5
Q ss_pred HHHHHHHHHhh-h-cCCCC-cccHHHHHHHHHh-HHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHH
Q psy8382 130 NLEWLEQLFRQ-T-VGDEK-EICRDDFKKILIT-KNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRA 205 (864)
Q Consensus 130 eieeL~~~F~~-D-~d~dG-~I~~eEF~~~l~~-~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~ 205 (864)
-++.+.+.|+. | .|++| .|+.+||+.++.. .+++ +.....++.++.+|+.+|.|++|.|+.+||..++..
T Consensus 7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~------~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDF------LDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHH------ccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 34678888888 7 99999 5999999988753 2111 112345678999999999999999999999999887
Q ss_pred HH
Q psy8382 206 CM 207 (864)
Q Consensus 206 l~ 207 (864)
+.
T Consensus 81 ~~ 82 (92)
T cd05025 81 LT 82 (92)
T ss_pred HH
Confidence 63
No 65
>smart00292 BRCT breast cancer carboxy-terminal domain.
Probab=97.53 E-value=0.00011 Score=62.78 Aligned_cols=64 Identities=27% Similarity=0.501 Sum_probs=51.9
Q ss_pred eehhhhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecCCChhh--hhHhhhcCCceechhhHHHHHHhC
Q psy8382 514 VTVEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPTCSGSK--YNAALKWGFPSVNKKWLLECARTG 585 (864)
Q Consensus 514 ~~~er~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~~sg~K--w~~A~~w~ipvVt~~WL~~c~~~~ 585 (864)
...++..+..++...||.+...+.+. +.||+|+...+..+ +..|...++|+|+++||.+|++.+
T Consensus 15 ~~~~~~~l~~~i~~~Gg~~~~~~~~~--------~~thvi~~~~~~~~~~~~~~~~~~~~iV~~~Wi~~~~~~~ 80 (80)
T smart00292 15 DKNERDELKELIEALGGKVTSSLSSK--------TTTHVIVGSPEGGKLELLLAIALGIPIVTEDWLLDCLKAG 80 (80)
T ss_pred CCccHHHHHHHHHHcCCEEecccCcc--------ceeEEEEcCCCCccHHHHHHHHcCCCCccHHHHHHHHHCc
Confidence 45567888999999999988764431 34999999887655 477888899999999999999875
No 66
>KOG3226|consensus
Probab=97.51 E-value=8e-05 Score=81.12 Aligned_cols=82 Identities=26% Similarity=0.366 Sum_probs=72.1
Q ss_pred CCCcceehhhhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecCCChhhhhHhhhcCCceechhhHHHHHHhCCCc
Q psy8382 509 SKPHVVTVEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPTCSGSKYNAALKWGFPSVNKKWLLECARTGKRV 588 (864)
Q Consensus 509 S~s~v~~~er~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~~sg~Kw~~A~~w~ipvVt~~WL~~c~~~~~~~ 588 (864)
-.+++..-+|..++.-+-.|||+|+..-.+-. |||||-.+.-.||..-.--|=.||+.+|+.+|++..++|
T Consensus 324 VlSGfqNP~Rs~LRskAl~LGAkY~pDW~~gs---------ThLICAF~NTPKy~QV~g~Gg~IV~keWI~~Cy~~kk~l 394 (508)
T KOG3226|consen 324 VLSGFQNPERSTLRSKALTLGAKYQPDWNAGS---------THLICAFPNTPKYRQVEGNGGTIVSKEWITECYAQKKLL 394 (508)
T ss_pred EEecccCchHHHHHHHHHhhcccccCCcCCCc---------eeEEEecCCCcchhhcccCCceEeeHHHHHHHHHHHhhc
Confidence 35666777888888889999999988755544 999999999999999888899999999999999999999
Q ss_pred CCCccccCCCc
Q psy8382 589 SEQQYLTGSDE 599 (864)
Q Consensus 589 ~e~~y~~~~~~ 599 (864)
|-..|++..+.
T Consensus 395 p~rrYlm~~~~ 405 (508)
T KOG3226|consen 395 PIRRYLMHAGK 405 (508)
T ss_pred cHHHHHhcCCC
Confidence 99999998764
No 67
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=97.51 E-value=0.00027 Score=67.11 Aligned_cols=62 Identities=21% Similarity=0.212 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHH
Q psy8382 128 KGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVM 203 (864)
Q Consensus 128 ~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL 203 (864)
+.....+.-.|.. |.|+||.|+.+|+..+. ....+..+..+|+.+|.|+||+||.+|+...+
T Consensus 44 ~~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--------------l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 44 PMCKDPVGWMFNQLDGNYDGKLSHHELAPIR--------------LDPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHHHHHHHCCCCCCcCCHHHHHHHH--------------ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 4466788999999 99999999999977532 12335678889999999999999999999998
No 68
>KOG4666|consensus
Probab=97.50 E-value=0.00017 Score=77.73 Aligned_cols=108 Identities=13% Similarity=0.216 Sum_probs=85.2
Q ss_pred HHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCC-CChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHh
Q psy8382 132 EWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQ-SPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEE 209 (864)
Q Consensus 132 eeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~-~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~ 209 (864)
..+..+|.. |.+++|.+++.| .+.+++.++.. ...+.++.+|++||.+.||++..++|.-+|+..+
T Consensus 259 d~l~~~f~LFde~~tg~~D~re----------~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~l-- 326 (412)
T KOG4666|consen 259 DKLAPTFMLFDEGTTGNGDYRE----------TVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVVL-- 326 (412)
T ss_pred hhhhhhhheecCCCCCcccHHH----------HhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHhc--
Confidence 467778888 889999999888 34455555543 5678999999999999999999999999998752
Q ss_pred cCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhccchHHHHH
Q psy8382 210 NGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHGGLLENLS 258 (864)
Q Consensus 210 ~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p~ll~~l~ 258 (864)
| +.+-.+-. +|+..+...||+|+|++|..++..+|++...+.
T Consensus 327 -g--v~~l~v~~----lf~~i~q~d~~ki~~~~f~~fa~~~p~~a~~~~ 368 (412)
T KOG4666|consen 327 -G--VEVLRVPV----LFPSIEQKDDPKIYASNFRKFAATEPNLALSEL 368 (412)
T ss_pred -C--cceeeccc----cchhhhcccCcceeHHHHHHHHHhCchhhhhhh
Confidence 4 22222333 788889889999999999999999998875543
No 69
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=97.50 E-value=0.0003 Score=56.64 Aligned_cols=60 Identities=28% Similarity=0.471 Sum_probs=49.5
Q ss_pred HHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHH
Q psy8382 134 LEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVM 203 (864)
Q Consensus 134 L~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL 203 (864)
+..+|.. |.+++|.|+++||..++.. +......+.+..+|+.+|.+++|.|+.+||..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKS----------LGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHH----------hCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 4567888 8999999999997766543 3345667889999999999999999999998765
No 70
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=97.49 E-value=0.00052 Score=62.03 Aligned_cols=72 Identities=15% Similarity=0.302 Sum_probs=57.1
Q ss_pred HHHHHHHHHhh-h-cCCCC-cccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHH
Q psy8382 130 NLEWLEQLFRQ-T-VGDEK-EICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRAC 206 (864)
Q Consensus 130 eieeL~~~F~~-D-~d~dG-~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l 206 (864)
.+..+.+.|+. | .|++| .|+.+||+.+|... |-.. +.....++.+..+++.+|.|++|.|+.+||..++..+
T Consensus 6 ~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~--~~~~---lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 6 AMVALIDVFHQYSGREGDKHKLKKSELKELINNE--LSHF---LEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred HHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHH--hHHH---hcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 56788899999 7 79999 69999999888642 1111 1233456779999999999999999999999988765
No 71
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.45 E-value=0.00068 Score=61.78 Aligned_cols=71 Identities=18% Similarity=0.345 Sum_probs=55.3
Q ss_pred HHHHHHHHHhh-hc-CC-CCcccHHHHHHHHHhH-HHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHH
Q psy8382 130 NLEWLEQLFRQ-TV-GD-EKEICRDDFKKILITK-NEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRA 205 (864)
Q Consensus 130 eieeL~~~F~~-D~-d~-dG~I~~eEF~~~l~~~-~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~ 205 (864)
....+.+.|.. |. |+ +|.|+.+||+.++... .++ +.....++.+..+|+.+|.|++|.|+.+||..++..
T Consensus 6 ~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~------lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 6 AMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEF------LKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHH------hhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 34678889998 76 87 7999999999877531 111 112345678999999999999999999999998876
Q ss_pred H
Q psy8382 206 C 206 (864)
Q Consensus 206 l 206 (864)
+
T Consensus 80 ~ 80 (94)
T cd05031 80 L 80 (94)
T ss_pred H
Confidence 4
No 72
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=97.42 E-value=0.00037 Score=56.50 Aligned_cols=52 Identities=29% Similarity=0.621 Sum_probs=42.8
Q ss_pred CCCcccHHHHHHHHHhHHHHHHHHHHhcCC-CChHHHHHHhhhhcCCCCCccCHHHHHHHHHH
Q psy8382 144 DEKEICRDDFKKILITKNEFIDAMHQFAGQ-SPDDKIKFLFRVYDLDGDGLIQHKELQHVMRA 205 (864)
Q Consensus 144 ~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~-~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~ 205 (864)
++|.|+.+||+.++. .+... ..++++..+|..+|.|++|+|+.+||..++..
T Consensus 1 ~~G~i~~~~~~~~l~----------~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALS----------KLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHH----------HTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHH----------HhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 479999999877652 23344 56788999999999999999999999998864
No 73
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=97.41 E-value=0.00092 Score=60.40 Aligned_cols=70 Identities=14% Similarity=0.273 Sum_probs=55.7
Q ss_pred HHHHHHHHHhh-hc-CC-CCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHH
Q psy8382 130 NLEWLEQLFRQ-TV-GD-EKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRAC 206 (864)
Q Consensus 130 eieeL~~~F~~-D~-d~-dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l 206 (864)
.+..|..+|.. |. |+ +|.|+.+||+.++... ..+.....++.+..+|+.+|.|++|.|+.+||-.++..+
T Consensus 8 ~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~-------~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 8 AIGLLVAIFHKYSGREGDKNTLSKKELKELIQKE-------LTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHH-------HhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 55678888988 76 66 8999999998877421 012334567899999999999999999999999888775
No 74
>KOG2562|consensus
Probab=97.40 E-value=0.00061 Score=76.93 Aligned_cols=117 Identities=20% Similarity=0.345 Sum_probs=82.8
Q ss_pred CCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHh----H-----------------------HHHHHHHHHhcCCCChH
Q psy8382 126 FDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILIT----K-----------------------NEFIDAMHQFAGQSPDD 177 (864)
Q Consensus 126 fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~----~-----------------------~EFl~~l~~~~~~~~ee 177 (864)
|+-+.-..++-.|-. |.|.||.|+.+++...-.. . .+|+..+..+.......
T Consensus 272 FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d~tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~k~t~~ 351 (493)
T KOG2562|consen 272 FSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGDHTLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEEDKDTPA 351 (493)
T ss_pred eeHHHHHHHHHHHhhhccccccccCHHHHHHHhccchhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhccCCCcc
Confidence 444444455556666 7777777777776543210 0 05666666666777778
Q ss_pred HHHHHhhhhcCCCCCccCHHHHHHHHHHHHH---hcC-CCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHH
Q psy8382 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACME---ENG-MQFSEEQIDHLTMALFEDADSENRGAITYESLKN 245 (864)
Q Consensus 178 kL~~aFk~fD~dgdG~Is~eELr~vL~~l~~---~~g-~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~ 245 (864)
-++-.|+++|.+++|.|+.+||+-+.....+ ..| ..++ .+++..+|++.+.+...|+||++||+.
T Consensus 352 SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~---fed~l~qi~DMvkP~~~~kItLqDlk~ 420 (493)
T KOG2562|consen 352 SLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQEALP---FEDALCQIRDMVKPEDENKITLQDLKG 420 (493)
T ss_pred chhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCccc---HHHHHHHHHHHhCccCCCceeHHHHhh
Confidence 8999999999999999999999988886532 222 1222 344555688888888899999999998
No 75
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.39 E-value=0.00015 Score=52.24 Aligned_cols=29 Identities=34% Similarity=0.818 Sum_probs=25.6
Q ss_pred HHHHHhhhhcCCCCCccCHHHHHHHHH-HH
Q psy8382 178 KIKFLFRVYDLDGDGLIQHKELQHVMR-AC 206 (864)
Q Consensus 178 kL~~aFk~fD~dgdG~Is~eELr~vL~-~l 206 (864)
+++.+|+.||.|++|+|+.+||+.+|+ ++
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~~l 30 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRKSL 30 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHHHT
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHHhc
Confidence 578999999999999999999999998 44
No 76
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.39 E-value=0.00082 Score=60.91 Aligned_cols=69 Identities=17% Similarity=0.328 Sum_probs=52.2
Q ss_pred HHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhc
Q psy8382 177 DKIKFLFRVYDLDGDGLIQHKELQHVMRACMEE-NGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKH 250 (864)
Q Consensus 177 ekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~-~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~ 250 (864)
+.+..+|..|- .+.|.++..||+.+|..=+.. .+..-+++.++. +|+..|.|+||.|+|+||+.++...
T Consensus 8 ~~lI~~FhkYa-G~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~----im~~LD~n~Dg~vdF~EF~~Lv~~l 77 (91)
T cd05024 8 EKMMLTFHKFA-GEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDK----IMKDLDDCRDGKVGFQSFFSLIAGL 77 (91)
T ss_pred HHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHH----HHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 46778899998 445799999999999753211 122234455555 9999999999999999999998764
No 77
>KOG0030|consensus
Probab=97.36 E-value=0.00038 Score=66.93 Aligned_cols=68 Identities=19% Similarity=0.355 Sum_probs=58.1
Q ss_pred CChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCC--CCcceeHHHHHHHHHh
Q psy8382 174 SPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSE--NRGAITYESLKNQLEK 249 (864)
Q Consensus 174 ~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d--~dG~IsfeEF~~~l~~ 249 (864)
+..++++.+|.+||..+||.|+..+..++|+.+ |.+.++.++.. .+.+.+.+ +--.|+||+|+-+++.
T Consensus 8 d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRal----G~nPT~aeV~k----~l~~~~~~~~~~~rl~FE~fLpm~q~ 77 (152)
T KOG0030|consen 8 DQMEEFKEAFLLFDRTGDGKISGSQVGDVLRAL----GQNPTNAEVLK----VLGQPKRREMNVKRLDFEEFLPMYQQ 77 (152)
T ss_pred chHHHHHHHHHHHhccCcccccHHHHHHHHHHh----cCCCcHHHHHH----HHcCcccchhhhhhhhHHHHHHHHHH
Confidence 344899999999999999999999999999997 99999999888 67766655 3467999999988765
No 78
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.30 E-value=0.0017 Score=74.02 Aligned_cols=55 Identities=35% Similarity=0.571 Sum_probs=47.9
Q ss_pred CChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 174 SPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 174 ~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
.....++.+|++||.|+||+|+.+||.. ++. +|+.+|.|+||.|+++||..++..
T Consensus 331 ~~~~~l~~aF~~~D~dgdG~Is~~E~~~-----------------~~~----~F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 331 AFTHAAQEIFRLYDLDGDGFITREEWLG-----------------SDA----VFDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred hhhHHHHHHHHHhCCCCCCcCcHHHHHH-----------------HHH----HHHHhCCCCCCCCcHHHHHHHHHH
Confidence 4568899999999999999999999931 233 899999999999999999998864
No 79
>KOG4065|consensus
Probab=97.25 E-value=0.001 Score=61.87 Aligned_cols=66 Identities=24% Similarity=0.441 Sum_probs=55.8
Q ss_pred HHhhhhcCCCCCccCHHHHHHHHHHHHH--hcCC----CCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHH
Q psy8382 181 FLFRVYDLDGDGLIQHKELQHVMRACME--ENGM----QFSEEQIDHLTMALFEDADSENRGAITYESLKNQ 246 (864)
Q Consensus 181 ~aFk~fD~dgdG~Is~eELr~vL~~l~~--~~g~----~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~ 246 (864)
-.|++.|.|++|+|+-=|+..++.-... ..|. -.++.+++.++|.+++.-|.|+||.|+|-||...
T Consensus 71 HYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 71 HYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 3699999999999999999999987643 2232 2478899999999999999999999999999764
No 80
>KOG0377|consensus
Probab=97.23 E-value=0.0025 Score=71.30 Aligned_cols=69 Identities=29% Similarity=0.397 Sum_probs=55.4
Q ss_pred HHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHH
Q psy8382 132 EWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRAC 206 (864)
Q Consensus 132 eeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l 206 (864)
..|..+|+. |.|++|.|+.+||+.++..+ -+.+...-.++.+-.+=+..|.|+||.|+.+||-++++..
T Consensus 547 s~LetiF~~iD~D~SG~isldEF~~a~~l~------~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 547 SSLETIFNIIDADNSGEISLDEFRTAWKLL------SSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred hhHHHHHHHhccCCCCceeHHHHHHHHHHH------HhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence 357788998 99999999999999887532 1223334466788888899999999999999999999864
No 81
>KOG2643|consensus
Probab=97.22 E-value=0.002 Score=72.39 Aligned_cols=128 Identities=13% Similarity=0.251 Sum_probs=79.6
Q ss_pred ccCcCCHHHHHhhhhhcCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHH-------------------------
Q psy8382 108 AYTSLRIHHNLVCLPRSGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKN------------------------- 161 (864)
Q Consensus 108 ~s~~L~~~el~~l~~~l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~------------------------- 161 (864)
..|.|+..|.--+..-+..+. ....-.|.. |.|+||.|+.+||..+....-
T Consensus 212 ~~GLIsfSdYiFLlTlLS~p~---~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~ns 288 (489)
T KOG2643|consen 212 ESGLISFSDYIFLLTLLSIPE---RNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNS 288 (489)
T ss_pred CCCeeeHHHHHHHHHHHccCc---ccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhh
Confidence 456666666666555544444 234445666 668888888888887663210
Q ss_pred ------------------HHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q psy8382 162 ------------------EFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLT 223 (864)
Q Consensus 162 ------------------EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv 223 (864)
||+..+..+ .+|-++.-|..||+..+|.|+..+|..+|... .+ .+.+..+.+.
T Consensus 289 aL~~yFFG~rg~~kLs~deF~~F~e~L----q~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~---a~--~n~~~k~~~l 359 (489)
T KOG2643|consen 289 ALLTYFFGKRGNGKLSIDEFLKFQENL----QEEILELEFERFDKGDSGAISEVDFAELLLAY---AG--VNSKKKHKYL 359 (489)
T ss_pred hHHHHhhccCCCccccHHHHHHHHHHH----HHHHHHHHHHHhCcccccccCHHHHHHHHHHH---cc--cchHhHHHHH
Confidence 333333221 24667777999999999999999999888764 23 2233333333
Q ss_pred HHHHHHhcCCCCcceeHHHHHHHHH
Q psy8382 224 MALFEDADSENRGAITYESLKNQLE 248 (864)
Q Consensus 224 ~~if~~~D~d~dG~IsfeEF~~~l~ 248 (864)
..+-++++.+ +-.||++||.+.+.
T Consensus 360 krvk~kf~~~-~~gISl~Ef~~Ff~ 383 (489)
T KOG2643|consen 360 KRVKEKFKDD-GKGISLQEFKAFFR 383 (489)
T ss_pred HHHHHhccCC-CCCcCHHHHHHHHH
Confidence 3466666655 45699998777654
No 82
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.16 E-value=0.0006 Score=48.62 Aligned_cols=25 Identities=28% Similarity=0.608 Sum_probs=23.3
Q ss_pred HHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 225 ALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 225 ~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
.+|+.+|.|+||+|+++||+.+|.+
T Consensus 4 ~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 4 EAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 3999999999999999999999875
No 83
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.14 E-value=0.0024 Score=57.63 Aligned_cols=71 Identities=18% Similarity=0.389 Sum_probs=55.3
Q ss_pred HHHHHHHHHhh-hcC--CCCcccHHHHHHHHHhH-HHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHH
Q psy8382 130 NLEWLEQLFRQ-TVG--DEKEICRDDFKKILITK-NEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRA 205 (864)
Q Consensus 130 eieeL~~~F~~-D~d--~dG~I~~eEF~~~l~~~-~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~ 205 (864)
.+..+...|.. +.. ++|.|+.+||+.++... ++++ .....++.+..+|+.+|.|++|.|+.+||..++..
T Consensus 6 ~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~------t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~ 79 (88)
T cd05030 6 AIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFL------KKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIK 79 (88)
T ss_pred HHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhh------ccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 56778888988 433 58999999999988532 1211 12344688999999999999999999999998887
Q ss_pred H
Q psy8382 206 C 206 (864)
Q Consensus 206 l 206 (864)
+
T Consensus 80 ~ 80 (88)
T cd05030 80 V 80 (88)
T ss_pred H
Confidence 5
No 84
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=96.99 E-value=0.0023 Score=59.66 Aligned_cols=64 Identities=17% Similarity=0.340 Sum_probs=54.9
Q ss_pred hHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhc
Q psy8382 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKH 250 (864)
Q Consensus 176 eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~ 250 (864)
.++...+|+..|. ++|+|+.++.+.++... .++.+.+.. |..-+|.|+||+++++||+-+|.--
T Consensus 9 ~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S------~L~~~~L~~----IW~LaD~~~dG~L~~~EF~iAm~Li 72 (104)
T PF12763_consen 9 KQKYDQIFQSLDP-QDGKISGDQAREFFMKS------GLPRDVLAQ----IWNLADIDNDGKLDFEEFAIAMHLI 72 (104)
T ss_dssp HHHHHHHHHCTSS-STTEEEHHHHHHHHHHT------TSSHHHHHH----HHHHH-SSSSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCC-CCCeEeHHHHHHHHHHc------CCCHHHHHH----HHhhhcCCCCCcCCHHHHHHHHHHH
Confidence 4678899999985 68999999999998864 588888888 9999999999999999999887643
No 85
>KOG0041|consensus
Probab=96.95 E-value=0.0036 Score=63.74 Aligned_cols=113 Identities=16% Similarity=0.214 Sum_probs=80.6
Q ss_pred hhhhcCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHH
Q psy8382 120 CLPRSGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKE 198 (864)
Q Consensus 120 l~~~l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eE 198 (864)
+.+.-.|+.++|+.++.+|.. |.|.||.|++.|++.+|..+ ......--++.+-+..|.|.||.||..|
T Consensus 87 yteF~eFsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKL----------gapQTHL~lK~mikeVded~dgklSfre 156 (244)
T KOG0041|consen 87 YTEFSEFSRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKL----------GAPQTHLGLKNMIKEVDEDFDGKLSFRE 156 (244)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHh----------CCchhhHHHHHHHHHhhcccccchhHHH
Confidence 344457888999999999999 99999999999998877654 1122234578888999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHH
Q psy8382 199 LQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQ 246 (864)
Q Consensus 199 Lr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~ 246 (864)
+--+++... .|.--.+..+..++ -..++|....|.---..|.+.
T Consensus 157 flLIfrkaa--agEL~~ds~~~~LA--r~~eVDVskeGV~GAknFFeA 200 (244)
T KOG0041|consen 157 FLLIFRKAA--AGELQEDSGLLRLA--RLSEVDVSKEGVSGAKNFFEA 200 (244)
T ss_pred HHHHHHHHh--ccccccchHHHHHH--HhcccchhhhhhhhHHHHHHH
Confidence 999888763 24322233333311 134578888777666665543
No 86
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.93 E-value=0.00073 Score=46.45 Aligned_cols=25 Identities=40% Similarity=0.719 Sum_probs=22.6
Q ss_pred HHHHhhhhcCCCCCccCHHHHHHHH
Q psy8382 179 IKFLFRVYDLDGDGLIQHKELQHVM 203 (864)
Q Consensus 179 L~~aFk~fD~dgdG~Is~eELr~vL 203 (864)
++.+|+.+|.|+||.|+.+||..++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 5678999999999999999999864
No 87
>KOG1929|consensus
Probab=96.66 E-value=0.0013 Score=80.22 Aligned_cols=84 Identities=18% Similarity=0.241 Sum_probs=69.7
Q ss_pred hcccCCCcceehhhhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecCC-ChhhhhHhhhcCCceechhhHHHHHH
Q psy8382 505 ACLSSKPHVVTVEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPTC-SGSKYNAALKWGFPSVNKKWLLECAR 583 (864)
Q Consensus 505 r~v~S~s~v~~~er~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~~-sg~Kw~~A~~w~ipvVt~~WL~~c~~ 583 (864)
.|+++.+++.+.|+..+..++.-+|+.+...+-... .+|+.+.. ...||+.|.+|++|||+.+|+++|+.
T Consensus 106 ~~~Vc~tgl~~~eK~ei~~~v~k~gg~~~~~L~s~v---------~~~~~~~~~~~~kYe~al~wn~~v~~~~w~~~s~~ 176 (811)
T KOG1929|consen 106 GLKVCLTGLSGDEKSEIKILVPKHGGTLHRSLSSDV---------NSLKILPEVKTEKYEQALKWNIPVVSDDWLFDSIE 176 (811)
T ss_pred ceEEEecccchHHHHHHHHHhhhcccEEehhhhhhh---------heeeeccccchHHHHHHHhhCCccccHHHHhhhhc
Confidence 566667888999999999999999987777654443 35555544 45999999999999999999999999
Q ss_pred hCCCcCCCccccCC
Q psy8382 584 TGKRVSEQQYLTGS 597 (864)
Q Consensus 584 ~~~~~~e~~y~~~~ 597 (864)
.+..++...|.++.
T Consensus 177 ~~~~~~~~~~e~~~ 190 (811)
T KOG1929|consen 177 KTAVLETKPYEGAP 190 (811)
T ss_pred cccccccccccccc
Confidence 99999999998865
No 88
>PRK05419 putative sulfite oxidase subunit YedZ; Reviewed
Probab=96.59 E-value=0.0041 Score=65.00 Aligned_cols=85 Identities=19% Similarity=0.071 Sum_probs=56.3
Q ss_pred eeCCchhhHHHHHHHHHHHHHHHHHHHHhhhcccccccCCccccCCcceeeeccccCCcccccccccccchhHHHHHHHH
Q psy8382 368 LPLDQHIYFHKMTGFFIFGYSVLHTIMHLLNFSLNVLGDGTINKKGLSLTEWLFTSRPGLFGLINGWANPTGVCLIIILT 447 (864)
Q Consensus 368 ipfD~~i~fHk~ig~~i~~~~~lH~iah~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~TG~~~~l~l~ 447 (864)
...|.-+.+||++|...++++++|.++++....... .........+.|.+ +.|.+++++++
T Consensus 68 ~~~~~l~~~RR~LGl~af~~a~lH~~~y~~~~~~~~----------~~~~~~~i~~~~~i---------~~G~ia~~lLl 128 (205)
T PRK05419 68 TGQPLLIRTRRLLGLWAFFYATLHLLSYLLLDLGLD----------WSLLGKEIVKRPYI---------TVGMAAFLILL 128 (205)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc----------HHHHHHHHHhchHH---------HHHHHHHHHHH
Confidence 455788899999999999999999987654321100 00000011123322 46999999999
Q ss_pred HHHHhccccccccccchhhHHHHHH
Q psy8382 448 IMFICSQTFVRKSGSFELLFLGGFN 472 (864)
Q Consensus 448 lm~~~S~~~vRR~~~Fe~F~~tH~l 472 (864)
.|.+||...+||+=.| .....|.+
T Consensus 129 ~LaiTS~~~~~rrLg~-~Wk~LH~l 152 (205)
T PRK05419 129 PLALTSTRASQRRLGK-RWQKLHRL 152 (205)
T ss_pred HHHHHhhHHHHHHHHH-HHHHHHHH
Confidence 9999999999885123 34456764
No 89
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=96.56 E-value=0.0012 Score=62.48 Aligned_cols=62 Identities=21% Similarity=0.322 Sum_probs=44.6
Q ss_pred ChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHH
Q psy8382 175 PDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQ 246 (864)
Q Consensus 175 ~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~ 246 (864)
....+.+.|..+|.|+||+|+..|++.+...+ ...+.-++. +++..|.|+||.||+.|+..+
T Consensus 52 ~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l------~~~e~C~~~----F~~~CD~n~d~~Is~~EW~~C 113 (113)
T PF10591_consen 52 CKRVVHWKFCQLDRNKDGVLDRSELKPLRRPL------MPPEHCARP----FFRSCDVNKDGKISLDEWCNC 113 (113)
T ss_dssp GHHHHHHHHHHH--T-SSEE-TTTTGGGGSTT------STTGGGHHH----HHHHH-TT-SSSEEHHHHHHH
T ss_pred hhhhhhhhHhhhcCCCCCccCHHHHHHHHHHH------hhhHHHHHH----HHHHcCCCCCCCCCHHHHccC
Confidence 44679999999999999999999999876543 123334555 999999999999999999764
No 90
>KOG4251|consensus
Probab=96.54 E-value=0.0084 Score=62.62 Aligned_cols=66 Identities=27% Similarity=0.464 Sum_probs=48.8
Q ss_pred HHHHHHHHhh-hcCCCCcccHHHHHHHHHhH-H-HHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHH
Q psy8382 131 LEWLEQLFRQ-TVGDEKEICRDDFKKILITK-N-EFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRA 205 (864)
Q Consensus 131 ieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~-~-EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~ 205 (864)
.+.|..+|.+ |.|.||+|+..|++..+... . -|..++ +.-+..|+..|.||||.|+.+|++--+..
T Consensus 100 rrklmviFsKvDVNtDrkisAkEmqrwImektaEHfqeam---------eeSkthFraVDpdgDGhvsWdEykvkFla 168 (362)
T KOG4251|consen 100 RRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAM---------EESKTHFRAVDPDGDGHVSWDEYKVKFLA 168 (362)
T ss_pred HHHHHHHHhhcccCccccccHHHHHHHHHHHHHHHHHHHH---------hhhhhheeeeCCCCCCceehhhhhhHHHh
Confidence 4678889999 99999999999988765432 1 222222 45566799999999999999999865544
No 91
>KOG0751|consensus
Probab=96.46 E-value=0.046 Score=62.31 Aligned_cols=95 Identities=18% Similarity=0.209 Sum_probs=66.4
Q ss_pred hhhccCcCCHHHHHhhhhhcCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHH----------------------
Q psy8382 105 QTVAYTSLRIHHNLVCLPRSGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKN---------------------- 161 (864)
Q Consensus 105 ~~~~s~~L~~~el~~l~~~l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~---------------------- 161 (864)
++.+.+.|+.+|+..+..-+ ..++ ......|.. |+.++|.++++++.+++.+.+
T Consensus 84 D~tKDglisf~eF~afe~~l-C~pD--al~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~~~ 160 (694)
T KOG0751|consen 84 DQTKDGLISFQEFRAFESVL-CAPD--ALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGDIR 160 (694)
T ss_pred hhcccccccHHHHHHHHhhc-cCch--HHHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhhhHH
Confidence 34556677777776654332 2232 234456666 779999999999999997532
Q ss_pred -------HHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHH
Q psy8382 162 -------EFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRAC 206 (864)
Q Consensus 162 -------EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l 206 (864)
||.+.+..+ ..|.-+.+|+..|+.++|.||.-++++++...
T Consensus 161 ~r~~ny~~f~Q~lh~~----~~E~~~qafr~~d~~~ng~is~Ldfq~imvt~ 208 (694)
T KOG0751|consen 161 KRHLNYAEFTQFLHEF----QLEHAEQAFREKDKAKNGFISVLDFQDIMVTI 208 (694)
T ss_pred HHhccHHHHHHHHHHH----HHHHHHHHHHHhcccCCCeeeeechHhhhhhh
Confidence 333333222 24668899999999999999999999988765
No 92
>KOG0033|consensus
Probab=96.34 E-value=0.0012 Score=69.56 Aligned_cols=64 Identities=11% Similarity=0.142 Sum_probs=60.1
Q ss_pred ccCCCCCCCCCcccHHHHHHHHHHHhCCcccccHHHHHHHHhhcCchhHHHhhhhh---hhcccccCCccccccc
Q psy8382 7 VSNSRPRSGFDKGNLEWLEQLFRQTVGDEKEICRDDFKKILITKNISDLYDKVHSF---VWYSSQYGHFTPCYVH 78 (864)
Q Consensus 7 ~~~~~~~~~~~~~~~~~l~~lF~~~~~~d~~l~~~efkkil~~~d~~dl~~k~~~~---~~is~~~~~~~~~~~~ 78 (864)
+.|++||.|.++. +||+++..++..++..+|-.+ +..++||+++|+.+ .+|+...+++|+|+.+
T Consensus 206 L~G~~PF~~~~~~------rlye~I~~g~yd~~~~~w~~i--s~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 206 LVGYPPFWDEDQH------RLYEQIKAGAYDYPSPEWDTV--TPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred HhCCCCCCCccHH------HHHHHHhccccCCCCcccCcC--CHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 5799999999998 999999999999999999998 78889999999998 7899999999999997
No 93
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.19 E-value=0.013 Score=47.22 Aligned_cols=48 Identities=17% Similarity=0.457 Sum_probs=38.3
Q ss_pred cCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 194 IQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 194 Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
++..|++.+|+.+ +..++++.+.. +|+++|.+++|.+..+||..++..
T Consensus 2 msf~Evk~lLk~~----NI~~~~~yA~~----LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 2 MSFKEVKKLLKMM----NIEMDDEYARQ----LFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp BEHHHHHHHHHHT----T----HHHHHH----HHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH----ccCcCHHHHHH----HHHHhcccCCCCccHHHHHHHHHH
Confidence 6889999999987 77788877777 999999999999999999998764
No 94
>PLN03122 Poly [ADP-ribose] polymerase; Provisional
Probab=96.15 E-value=0.0052 Score=75.59 Aligned_cols=83 Identities=22% Similarity=0.251 Sum_probs=65.5
Q ss_pred cccCCCcceehhhhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecCCC----h-hhhhHhhhcCCceechhhHHH
Q psy8382 506 CLSSKPHVVTVEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPTCS----G-SKYNAALKWGFPSVNKKWLLE 580 (864)
Q Consensus 506 ~v~S~s~v~~~er~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~~s----g-~Kw~~A~~w~ipvVt~~WL~~ 580 (864)
+...+++.....|..++.+++.+||.+..-. .+. ||+|+..-. | .|...|++.|||||+-+||.+
T Consensus 193 ~~fviTGtl~~sr~elK~~Ie~~GGkvsssV-s~~---------T~lIvt~~ev~k~gsSKlkkAk~lgIpIVsEd~L~d 262 (815)
T PLN03122 193 MMISLSGRLSRTHQYWKKDIEKHGGKVANSV-EGV---------TCLVVSPAERERGGSSKIAEAMERGIPVVREAWLID 262 (815)
T ss_pred cEEEEeCCCCCCHHHHHHHHHHcCCEEcccc-ccc---------eEEEEcCccccccCccHHHHHHHcCCcCccHHHHHH
Confidence 3333444333367789999999999988874 444 788776633 3 799999999999999999999
Q ss_pred HHHhCCCcCCCccccCCC
Q psy8382 581 CARTGKRVSEQQYLTGSD 598 (864)
Q Consensus 581 c~~~~~~~~e~~y~~~~~ 598 (864)
|++.++.+++..|++..+
T Consensus 263 ~i~~~k~~~~~~y~l~~~ 280 (815)
T PLN03122 263 SIEKQEAQPLEAYDVVSD 280 (815)
T ss_pred HHhcCCcccchhhhhccc
Confidence 999999999999988543
No 95
>KOG0040|consensus
Probab=96.13 E-value=0.017 Score=72.54 Aligned_cols=118 Identities=18% Similarity=0.304 Sum_probs=91.7
Q ss_pred hhcCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHH
Q psy8382 122 PRSGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQ 200 (864)
Q Consensus 122 ~~l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr 200 (864)
...|.+++++.+..-+|+- |.+.+|.++.++|+.||...+ ..+.....+.++-+++.+..+.|++.+|+|+..|.-
T Consensus 2243 n~~GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslg---Y~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~ 2319 (2399)
T KOG0040|consen 2243 NHNGVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLG---YDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYM 2319 (2399)
T ss_pred ccCCCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcC---CCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHH
Confidence 4579999999999999999 999999999999999887542 001122345667799999999999999999999998
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 201 HVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 201 ~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
.+|-.- ++..-.+.++|+. .|+.+|. +.-+|+.++...-|.+
T Consensus 2320 afmi~~--ETeNI~s~~eIE~----AfraL~a-~~~yvtke~~~~~ltr 2361 (2399)
T KOG0040|consen 2320 AFMISK--ETENILSSEEIED----AFRALDA-GKPYVTKEELYQNLTR 2361 (2399)
T ss_pred HHHHhc--ccccccchHHHHH----HHHHhhc-CCccccHHHHHhcCCH
Confidence 887653 2222356678888 8999998 7778988886554443
No 96
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=96.08 E-value=0.011 Score=67.56 Aligned_cols=53 Identities=23% Similarity=0.382 Sum_probs=46.3
Q ss_pred HHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHH
Q psy8382 131 LEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRAC 206 (864)
Q Consensus 131 ieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l 206 (864)
...+..+|.. |.|+||.|+.+||.. ...+|+.+|.|+||.|+.+||..+++..
T Consensus 333 ~~~l~~aF~~~D~dgdG~Is~~E~~~-----------------------~~~~F~~~D~d~DG~Is~eEf~~~~~~~ 386 (391)
T PRK12309 333 THAAQEIFRLYDLDGDGFITREEWLG-----------------------SDAVFDALDLNHDGKITPEEMRAGLGAA 386 (391)
T ss_pred hHHHHHHHHHhCCCCCCcCcHHHHHH-----------------------HHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 3678889999 999999999999621 4668999999999999999999999875
No 97
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=96.05 E-value=0.017 Score=53.89 Aligned_cols=68 Identities=18% Similarity=0.387 Sum_probs=55.3
Q ss_pred CCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHH
Q psy8382 126 FDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMR 204 (864)
Q Consensus 126 fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~ 204 (864)
++++|.+...++|.. | .++|.|+-++.+.++. ..+-+.+.|..++.+.|.|+||+++.+||.-++.
T Consensus 4 ls~~e~~~y~~~F~~l~-~~~g~isg~~a~~~f~------------~S~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~ 70 (104)
T PF12763_consen 4 LSPEEKQKYDQIFQSLD-PQDGKISGDQAREFFM------------KSGLPRDVLAQIWNLADIDNDGKLDFEEFAIAMH 70 (104)
T ss_dssp -SCCHHHHHHHHHHCTS-SSTTEEEHHHHHHHHH------------HTTSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcC-CCCCeEeHHHHHHHHH------------HcCCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHH
Confidence 456688899999998 6 4689999999776543 2356679999999999999999999999999887
Q ss_pred HH
Q psy8382 205 AC 206 (864)
Q Consensus 205 ~l 206 (864)
.+
T Consensus 71 Li 72 (104)
T PF12763_consen 71 LI 72 (104)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 98
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=95.94 E-value=0.053 Score=49.28 Aligned_cols=72 Identities=17% Similarity=0.308 Sum_probs=56.0
Q ss_pred HHHHHHHHHhhhcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHH
Q psy8382 130 NLEWLEQLFRQTVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRAC 206 (864)
Q Consensus 130 eieeL~~~F~~D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l 206 (864)
.+..|...|..-..+.|.|+..||+.++... |-..+ ......+.+..+|+..|.|+||.|+..||-.++..+
T Consensus 6 ai~~lI~~FhkYaG~~~tLsk~Elk~Ll~~E--lp~~l---~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l 77 (91)
T cd05024 6 SMEKMMLTFHKFAGEKNYLNRDDLQKLMEKE--FSEFL---KNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGL 77 (91)
T ss_pred HHHHHHHHHHHHcCCCCcCCHHHHHHHHHHH--hHHHH---cCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4567888888822556799999999988654 32222 234456889999999999999999999999998875
No 99
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=95.78 E-value=0.013 Score=40.27 Aligned_cols=23 Identities=22% Similarity=0.572 Sum_probs=20.8
Q ss_pred HHHHHhcCCCCcceeHHHHHHHH
Q psy8382 225 ALFEDADSENRGAITYESLKNQL 247 (864)
Q Consensus 225 ~if~~~D~d~dG~IsfeEF~~~l 247 (864)
.+|+.+|.|+||.|+++||.+++
T Consensus 3 ~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 3 DAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHTTTSSSEEEHHHHHHHH
T ss_pred HHHHHHcCCCCCcCCHHHHHHHC
Confidence 48999999999999999999864
No 100
>KOG0046|consensus
Probab=95.74 E-value=0.025 Score=64.94 Aligned_cols=67 Identities=18% Similarity=0.308 Sum_probs=53.2
Q ss_pred HHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 177 DKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 177 ekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
..++..|...| |++|+|+..|+..++...-... .....+++++ ++.+.+.|.+|+|+||||+.++..
T Consensus 19 ~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~-g~~~~eei~~----~l~~~~~~~~g~v~fe~f~~~~~~ 85 (627)
T KOG0046|consen 19 RELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPL-GYFVREEIKE----ILGEVGVDADGRVEFEEFVGIFLN 85 (627)
T ss_pred HHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccc-cchhHHHHHH----HHhccCCCcCCccCHHHHHHHHHh
Confidence 46788899999 9999999999999998751111 1223455555 999999999999999999997755
No 101
>KOG0040|consensus
Probab=95.56 E-value=0.021 Score=71.79 Aligned_cols=66 Identities=14% Similarity=0.442 Sum_probs=56.9
Q ss_pred HHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCC-------CHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhc
Q psy8382 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQF-------SEEQIDHLTMALFEDADSENRGAITYESLKNQLEKH 250 (864)
Q Consensus 178 kL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~l-------s~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~ 250 (864)
++..+|+.||++.+|.++..+|+..|+++ |.++ ++.++++ ++.-+|++.+|+|+..||+.+|.++
T Consensus 2254 EFs~~fkhFDkek~G~Ldhq~F~sCLrsl----gY~lpmvEe~~~~p~fe~----~ld~vDP~r~G~Vsl~dY~afmi~~ 2325 (2399)
T KOG0040|consen 2254 EFSMMFKHFDKEKNGRLDHQHFKSCLRSL----GYDLPMVEEGEPEPEFEE----ILDLVDPNRDGYVSLQDYMAFMISK 2325 (2399)
T ss_pred HHHHHHHHhchhhccCCcHHHHHHHHHhc----CCCCcccccCCCChhHHH----HHHhcCCCCcCcccHHHHHHHHHhc
Confidence 46678999999999999999999999986 6554 2336777 8999999999999999999999775
Q ss_pred c
Q psy8382 251 G 251 (864)
Q Consensus 251 p 251 (864)
+
T Consensus 2326 E 2326 (2399)
T KOG0040|consen 2326 E 2326 (2399)
T ss_pred c
Confidence 4
No 102
>COG4097 Predicted ferric reductase [Inorganic ion transport and metabolism]
Probab=95.45 E-value=0.025 Score=63.00 Aligned_cols=194 Identities=14% Similarity=0.071 Sum_probs=92.8
Q ss_pred hhhHHHHHHHHHHHHhhhhcCCccee-eCCchhhHHHHHHHHHHHHHHHHHHHHhh-hcccccccCCccccCCcceeeec
Q psy8382 343 NCMFVLVLMLRHCITFLRTRGFSVFL-PLDQHIYFHKMTGFFIFGYSVLHTIMHLL-NFSLNVLGDGTINKKGLSLTEWL 420 (864)
Q Consensus 343 n~alillpv~Rn~it~LR~t~l~~~i-pfD~~i~fHk~ig~~i~~~~~lH~iah~~-n~~~~~~~~~~~~~~~~~~~~~~ 420 (864)
-|+++++-..|-- .+.... -+|+.-.||||.|..++++...|-+.... +|.. .. .++..+.+..-|.
T Consensus 51 ~msl~~~LA~R~~-------~iE~~~~GlD~~Y~~HK~~sIlailL~l~H~~~~~~g~w~~---~~-~l~~k~a~v~~~l 119 (438)
T COG4097 51 LMSLIFLLATRLP-------LIEAWFNGLDKIYRFHKYTSILAILLLLAHNFILFIGNWLT---LQ-LLNFKPAPVKPSL 119 (438)
T ss_pred HHHHHHHHHhchH-------HHhhhhhhhhHHhHHHHHHHHHHHHHHHHHHHHHHcCcchh---cc-cccccccccchhh
Confidence 3455555555541 222223 57999999999999999999999888443 3321 10 0000111100010
Q ss_pred cccCCcccccccccccchhHHHHHHHHHHHHhccccccccccchhhHHHHHHHHHHHHhhhhcC---CCceEEEEecccc
Q psy8382 421 FTSRPGLFGLINGWANPTGVCLIIILTIMFICSQTFVRKSGSFELLFLGGFNVTLQGFWRVMQP---DDSVTHVVLGAFT 497 (864)
Q Consensus 421 ~~~~~g~~~~~~g~~~~TG~~~~l~l~lm~~~S~~~vRR~~~Fe~F~~tH~l~ivhg~~~~L~p---p~~~~~ll~p~~l 497 (864)
.|.+. .+---|-.+..+++.|.+-+.-+-+= -||.+-++|.++++..+...+|. -...+|. .|++.
T Consensus 120 ----~~~~~----s~~elG~~~~yi~~~lllV~~l~~~i--~Ye~WR~~H~lm~vvYilg~~H~~~l~~~~~~s-~~a~s 188 (438)
T COG4097 120 ----AGMWR----SAKELGEWSAYIFIGLLLVWRLWLNI--GYENWRIAHRLMAVVYILGLLHSYGLLNYLYLS-WPAVS 188 (438)
T ss_pred ----hhhhH----HHHHHHHHHHHHHHHHHHHHHHHHhc--CchhHHHHHHHHHHHHHHHHHHHHHhcchhHhh-ccHHH
Confidence 01100 11112444444444444334333444 59999999998764333322220 0001111 11111
Q ss_pred ccc-----cchhhcccCCCcceehhhhhhhh--hhhhcCCceeEeeeccCCCC-CCCCCceEEEecCCC
Q psy8382 498 PTF-----HKLYACLSSKPHVVTVEWLKQTK--LSQLLGAGYQEEFMKRDNPK-NNKKASTHLVCPTCS 558 (864)
Q Consensus 498 ~~~-----drl~r~v~S~s~v~~~er~~l~~--li~lLGa~~~e~~~rK~~~k-~~~gq~thLvcp~~s 558 (864)
|.. -.+...+.+..++.+..+.++-+ ..+.++.++.++...-.++. +.+||+.||-|+.-+
T Consensus 189 wl~~~~allG~l~~iysi~~y~~~s~~y~~~vt~~~r~~~~t~eit~~l~~~~~~qaGQFAfLk~~~~~ 257 (438)
T COG4097 189 WLVIAFALLGLLAAIYSIFGYFGRSFPYLGKVTAPQRGNVDTLEITIGLQGPWLYQAGQFAFLKIEIEE 257 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccceEEechhhcCcchheeecccCCcccccCCceEEEEecccc
Confidence 111 11111122222333333322211 13455667777777766554 589999999998643
No 103
>KOG0039|consensus
Probab=95.41 E-value=0.083 Score=64.48 Aligned_cols=72 Identities=10% Similarity=0.286 Sum_probs=52.2
Q ss_pred HHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHH
Q psy8382 132 EWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRAC 206 (864)
Q Consensus 132 eeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l 206 (864)
..++-+|+. |. .+|.++.+|+..++...- +... .........+....+|...|.++.|++..+++..++...
T Consensus 18 ~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~ll~~~ 90 (646)
T KOG0039|consen 18 DKLQTFFDMYDK-GDGKLTEEEVRELIMSSI-SANW-LSLIKKQTEEYAALIMEELDPDHKGYITNEDLEILLLQI 90 (646)
T ss_pred HHHHHHHHHHhh-hcCCccHHHHHHHHHHHH-Hhhh-hhhhhhhhhHHHHHhhhhccccccceeeecchhHHHHhc
Confidence 478888888 76 999999999888765431 1111 111223345667788999999999999999999888753
No 104
>KOG0751|consensus
Probab=95.07 E-value=0.093 Score=59.97 Aligned_cols=54 Identities=15% Similarity=0.330 Sum_probs=44.3
Q ss_pred hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHH
Q psy8382 141 TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRAC 206 (864)
Q Consensus 141 D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l 206 (864)
|..+||.|+++||+..= . ....++...+.+|+.||+.++|.+|.+++.+++...
T Consensus 84 D~tKDglisf~eF~afe-------~-----~lC~pDal~~~aFqlFDr~~~~~vs~~~~~~if~~t 137 (694)
T KOG0751|consen 84 DQTKDGLISFQEFRAFE-------S-----VLCAPDALFEVAFQLFDRLGNGEVSFEDVADIFGQT 137 (694)
T ss_pred hhcccccccHHHHHHHH-------h-----hccCchHHHHHHHHHhcccCCCceehHHHHHHHhcc
Confidence 67889999999987421 1 123457889999999999999999999999999875
No 105
>PLN03123 poly [ADP-ribose] polymerase; Provisional
Probab=95.01 E-value=0.021 Score=71.85 Aligned_cols=86 Identities=15% Similarity=0.156 Sum_probs=65.0
Q ss_pred hhhcccCCCcceehhhhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecCC---ChhhhhHhhhcCCceechhhHH
Q psy8382 503 LYACLSSKPHVVTVEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPTC---SGSKYNAALKWGFPSVNKKWLL 579 (864)
Q Consensus 503 l~r~v~S~s~v~~~er~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~~---sg~Kw~~A~~w~ipvVt~~WL~ 579 (864)
|..+.++..+-.......++++++.+||.+.....+.. |||+...- .+.|+..|++.|||||+-+||.
T Consensus 394 l~~~~i~i~G~~~~~~~~~k~~Ie~~GG~~s~~v~~~~---------t~l~tt~e~~k~~~kv~qAk~~~ipIVsedwL~ 464 (981)
T PLN03123 394 LGDLKVSIVGASKEKVTEWKAKIEEAGGVFHATVKKDT---------NCLVVCGELDDEDAEMRKARRMKIPIVREDYLV 464 (981)
T ss_pred cCCeEEEEecCCCCcHHHHHHHHHhcCCEEeeeccCCc---------eEEEccHHhhhcchHHHHHHhcCCCcccHHHHH
Confidence 34444444443333346788889999999888744333 88877741 3677999999999999999999
Q ss_pred HHHHhCCCcCCCccccCC
Q psy8382 580 ECARTGKRVSEQQYLTGS 597 (864)
Q Consensus 580 ~c~~~~~~~~e~~y~~~~ 597 (864)
+|.+.+.++|+..|.+.+
T Consensus 465 ds~~~~~~~p~~~y~~~~ 482 (981)
T PLN03123 465 DCFKKKKKLPFDKYKLEA 482 (981)
T ss_pred HHHhccccCcchhhhhcc
Confidence 999999999999997753
No 106
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=94.65 E-value=0.038 Score=39.69 Aligned_cols=26 Identities=19% Similarity=0.272 Sum_probs=22.0
Q ss_pred HHHHHHhh-hcCCCCcccHHHHHHHHH
Q psy8382 133 WLEQLFRQ-TVGDEKEICRDDFKKILI 158 (864)
Q Consensus 133 eL~~~F~~-D~d~dG~I~~eEF~~~l~ 158 (864)
++++.|.. |.|++|.|+.+||..++.
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 46788888 999999999999998876
No 107
>KOG2562|consensus
Probab=94.46 E-value=0.073 Score=60.68 Aligned_cols=103 Identities=16% Similarity=0.308 Sum_probs=69.5
Q ss_pred HHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCC---------ChHHHHHH---hhhhcCCCCCccCHHHH
Q psy8382 133 WLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQS---------PDDKIKFL---FRVYDLDGDGLIQHKEL 199 (864)
Q Consensus 133 eL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~---------~eekL~~a---Fk~fD~dgdG~Is~eEL 199 (864)
.+++.|-. +....|+|+..|++... |+++|..+.... ..+....+ |--+|+|.||.|+.++|
T Consensus 226 vi~rIFy~~nrs~tG~iti~el~~sn-----ll~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~Dhd~lidk~~L 300 (493)
T KOG2562|consen 226 VIQRIFYYLNRSRTGRITIQELLRSN-----LLDALLELDEEEDINQVTRYFSYEHFYVIYCKFWELDTDHDGLIDKEDL 300 (493)
T ss_pred HhhhhheeeCCccCCceeHHHHHHhH-----HHHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhccccccccCHHHH
Confidence 35667777 88999999999976543 455554433221 12334444 77789999999999999
Q ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHH----HhcCCCCcceeHHHHHHHHHhcc
Q psy8382 200 QHVMRACMEENGMQFSEEQIDHLTMALFE----DADSENRGAITYESLKNQLEKHG 251 (864)
Q Consensus 200 r~vL~~l~~~~g~~ls~e~i~~iv~~if~----~~D~d~dG~IsfeEF~~~l~~~p 251 (864)
...-... ++.- +++.+|. ..-.-.+|+++|++|+.++...+
T Consensus 301 ~ry~d~t-------lt~~----ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e 345 (493)
T KOG2562|consen 301 KRYGDHT-------LTER----IVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEE 345 (493)
T ss_pred HHHhccc-------hhhH----HHHHHHhhccccceeeecCcccHHHHHHHHHHhc
Confidence 8765432 3433 3444777 33345689999999999887654
No 108
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=94.42 E-value=0.036 Score=37.10 Aligned_cols=27 Identities=41% Similarity=0.812 Sum_probs=24.6
Q ss_pred HHHHhhhhcCCCCCccCHHHHHHHHHH
Q psy8382 179 IKFLFRVYDLDGDGLIQHKELQHVMRA 205 (864)
Q Consensus 179 L~~aFk~fD~dgdG~Is~eELr~vL~~ 205 (864)
++.+|+.+|.+++|.|+.+||..+++.
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 578999999999999999999998864
No 109
>PF14658 EF-hand_9: EF-hand domain
Probab=94.27 E-value=0.14 Score=43.74 Aligned_cols=59 Identities=17% Similarity=0.308 Sum_probs=49.2
Q ss_pred HHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcC-CCChHHHHHHhhhhcCCCC-CccCHHHHHHHHHH
Q psy8382 137 LFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAG-QSPDDKIKFLFRVYDLDGD-GLIQHKELQHVMRA 205 (864)
Q Consensus 137 ~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~-~~~eekL~~aFk~fD~dgd-G~Is~eELr~vL~~ 205 (864)
.|.. |.++.|.|...++..+|. .... ...+.+++.+-+.+|.+|. |.|+.++|..+|+.
T Consensus 3 ~F~~fD~~~tG~V~v~~l~~~Lr----------a~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 3 AFDAFDTQKTGRVPVSDLITYLR----------AVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred chhhcCCcCCceEeHHHHHHHHH----------HHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 5777 889999999999765543 3334 5667899999999999999 99999999999875
No 110
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=94.17 E-value=0.13 Score=41.67 Aligned_cols=50 Identities=18% Similarity=0.299 Sum_probs=35.8
Q ss_pred cccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHH
Q psy8382 147 EICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRAC 206 (864)
Q Consensus 147 ~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l 206 (864)
++++.|.+.++. .+.-...++....+|+.+|++++|.+..+||.++++.+
T Consensus 1 kmsf~Evk~lLk----------~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~L 50 (51)
T PF14788_consen 1 KMSFKEVKKLLK----------MMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKRL 50 (51)
T ss_dssp EBEHHHHHHHHH----------HTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHH----------HHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence 366777665543 33344566788999999999999999999999999864
No 111
>KOG0038|consensus
Probab=94.16 E-value=0.29 Score=47.80 Aligned_cols=120 Identities=13% Similarity=0.138 Sum_probs=84.0
Q ss_pred cCcCCHHHHHhhhhhcCCCHHHHHHHHHHHhh-hcC-----C------CCcccHHHHHHHHHhHHHHHHHHHHhcCCCCh
Q psy8382 109 YTSLRIHHNLVCLPRSGFDKGNLEWLEQLFRQ-TVG-----D------EKEICRDDFKKILITKNEFIDAMHQFAGQSPD 176 (864)
Q Consensus 109 s~~L~~~el~~l~~~l~fs~~eieeL~~~F~~-D~d-----~------dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~e 176 (864)
.+.++.++|..++..+-|+.+++-.+...|.. -.+ - .-++.++... -|-.+......
T Consensus 5 ~~vFT~eqLd~YQDCTFFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~-----------kMPELkenpfk 73 (189)
T KOG0038|consen 5 QTVFTEEQLDEYQDCTFFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIE-----------KMPELKENPFK 73 (189)
T ss_pred cceeeHHHHhhhcccccccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHh-----------hChhhhcChHH
Confidence 34567889999999999999999999999986 221 1 1134454432 23333333444
Q ss_pred HHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 177 DKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 177 ekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
+++-.+| -.||.|.+|.++|-+++..+ ++ +...+++ +.+.|+-.|.|+|+.|--++...++.+
T Consensus 74 ~ri~e~F---SeDG~GnlsfddFlDmfSV~-sE----~APrdlK--~~YAFkIYDfd~D~~i~~~DL~~~l~~ 136 (189)
T KOG0038|consen 74 RRICEVF---SEDGRGNLSFDDFLDMFSVF-SE----MAPRDLK--AKYAFKIYDFDGDEFIGHDDLEKTLTS 136 (189)
T ss_pred HHHHHHh---ccCCCCcccHHHHHHHHHHH-Hh----hChHHhh--hhheeEEeecCCCCcccHHHHHHHHHH
Confidence 5555555 57999999999999999875 11 2233343 355888899999999999998888765
No 112
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=93.97 E-value=0.2 Score=44.36 Aligned_cols=70 Identities=21% Similarity=0.377 Sum_probs=51.7
Q ss_pred HHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhcc
Q psy8382 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGM-QFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHG 251 (864)
Q Consensus 178 kL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~-~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p 251 (864)
++..+|+.|-. +.+.||.++|+++|+.- .+. .++.++++++++..-........+.+++++|...|....
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~e---Q~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~~ 71 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREE---QGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSDE 71 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHT---SS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHSTT
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHH---hccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCCc
Confidence 46789999955 89999999999999874 343 568888888544433322223579999999999997653
No 113
>COG2717 Predicted membrane protein [Function unknown]
Probab=93.87 E-value=0.16 Score=53.01 Aligned_cols=109 Identities=17% Similarity=0.097 Sum_probs=69.8
Q ss_pred hhhcccccccchhhHHHHHHHHHHHHhhhhcCCcceeeCCchhhHHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccc
Q psy8382 332 FARACGQCLNFNCMFVLVLMLRHCITFLRTRGFSVFLPLDQHIYFHKMTGFFIFGYSVLHTIMHLLNFSLNVLGDGTINK 411 (864)
Q Consensus 332 iaRg~g~~l~~n~alillpv~Rn~it~LR~t~l~~~ipfD~~i~fHk~ig~~i~~~~~lH~iah~~n~~~~~~~~~~~~~ 411 (864)
.--|.+++.-++++|.+-|.-|... --.-+.+-|.+|...++++++|.++|++-.-.....
T Consensus 45 ~~~g~~al~fLl~~la~tp~~~~~~-------------~~~l~~~Rr~LGl~af~~~~lH~~~Y~~~~l~~~~~------ 105 (209)
T COG2717 45 HFTGIWALIFLLVTLAVTPLARLLK-------------QPKLIRIRRALGLWAFFYALLHFTAYLVLDLGLDLA------ 105 (209)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHhc-------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH------
Confidence 3456666667788888878766642 012345788999999999999999997542111100
Q ss_pred CCcceeeeccccCCcccccccccccchhHHHHHHHHHHHHhccccccccccchhhHHHHHHH
Q psy8382 412 KGLSLTEWLFTSRPGLFGLINGWANPTGVCLIIILTIMFICSQTFVRKSGSFELLFLGGFNV 473 (864)
Q Consensus 412 ~~~~~~~~~~~~~~g~~~~~~g~~~~TG~~~~l~l~lm~~~S~~~vRR~~~Fe~F~~tH~l~ 473 (864)
....-...+|.+ .-|++++++|+.|.+||.+.+||+-. .---..|.|.
T Consensus 106 ----~~~~d~~~rpyi---------tiG~iaflll~pLalTS~k~~~rrlG-~rW~~LHrLv 153 (209)
T COG2717 106 ----LLGLDLLKRPYI---------TIGMIAFLLLIPLALTSFKWVRRRLG-KRWKKLHRLV 153 (209)
T ss_pred ----HhhHHHHHhHHH---------HHHHHHHHHHHHHHHHhhHHHHHHHH-HHHHHHHHHH
Confidence 000011234433 36999999999999999999999722 2223356553
No 114
>KOG1029|consensus
Probab=93.68 E-value=0.37 Score=57.79 Aligned_cols=62 Identities=15% Similarity=0.333 Sum_probs=53.7
Q ss_pred hHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHH
Q psy8382 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQL 247 (864)
Q Consensus 176 eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l 247 (864)
.-+.+.+|..+|+..+|++|-..-|.+|... .++..++-. |..-.|.|+||+++-|||+-.|
T Consensus 194 klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS------~Lpq~~LA~----IW~LsDvd~DGkL~~dEfilam 255 (1118)
T KOG1029|consen 194 KLKYRQLFNALDKTRSGYLSGQQARSALGQS------GLPQNQLAH----IWTLSDVDGDGKLSADEFILAM 255 (1118)
T ss_pred hhHHHHHhhhcccccccccccHHHHHHHHhc------CCchhhHhh----heeeeccCCCCcccHHHHHHHH
Confidence 3578899999999999999999999999763 477777777 8888999999999999998655
No 115
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=93.11 E-value=0.084 Score=50.03 Aligned_cols=60 Identities=20% Similarity=0.254 Sum_probs=40.3
Q ss_pred HHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHH
Q psy8382 130 NLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQH 201 (864)
Q Consensus 130 eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~ 201 (864)
....+.=.|.. |.|+||.|+..|+..+... . ...+.-++.+|+..|.|+||.||..|+..
T Consensus 52 ~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~-----------l-~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 52 CKRVVHWKFCQLDRNKDGVLDRSELKPLRRP-----------L-MPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp GHHHHHHHHHHH--T-SSEE-TTTTGGGGST-----------T-STTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhhhHhhhcCCCCCccCHHHHHHHHHH-----------H-hhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 45677778999 9999999999996543211 0 23344578899999999999999999864
No 116
>KOG4578|consensus
Probab=92.93 E-value=0.044 Score=59.63 Aligned_cols=67 Identities=13% Similarity=0.253 Sum_probs=54.2
Q ss_pred HHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhcc
Q psy8382 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHG 251 (864)
Q Consensus 178 kL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p 251 (864)
.+.+-|..+|+|.++.|...|++.+=+.+. .....+.-...+++..|.|+|.+|+++|++.++...+
T Consensus 334 vv~w~F~qLdkN~nn~i~rrEwKpFK~~l~-------k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~~~ 400 (421)
T KOG4578|consen 334 VVHWYFNQLDKNSNNDIERREWKPFKRVLL-------KKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGVEK 400 (421)
T ss_pred eeeeeeeeecccccCccchhhcchHHHHHH-------hhccHHHHhhhcchhcccCCCceecHHHHhhhhcccc
Confidence 588899999999999999999988765542 1223444455699999999999999999999987654
No 117
>KOG2043|consensus
Probab=92.56 E-value=0.089 Score=65.70 Aligned_cols=69 Identities=22% Similarity=0.444 Sum_probs=53.4
Q ss_pred hhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecCC-ChhhhhHhhhcCCceechhhHHHHHHhCCCcCCCccccCCCc
Q psy8382 521 QTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPTC-SGSKYNAALKWGFPSVNKKWLLECARTGKRVSEQQYLTGSDE 599 (864)
Q Consensus 521 l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~~-sg~Kw~~A~~w~ipvVt~~WL~~c~~~~~~~~e~~y~~~~~~ 599 (864)
+...++.+|+.+.+. .... ||+|...+ .-.+.=.|.-.|+||||.+||.+|+++|..++|++|.+...+
T Consensus 673 ~k~~~k~lg~s~~ss-~~e~---------Th~i~~rirRT~k~Leai~~G~~ivT~~wL~s~~k~g~~~dek~yil~D~e 742 (896)
T KOG2043|consen 673 YKLAKKFLGGSVASS-DSEA---------THFIADRIRRTLKFLEAISSGKPLVTPQWLVSSLKSGEKLDEKPYILHDEE 742 (896)
T ss_pred hhhHHhhccceeecc-cccc---------eeeeehhhhccHHHHhhhccCCcccchHHHHHHhhccccccCccccccCHH
Confidence 444556666555553 3333 89998876 467888888899999999999999999999999999886443
No 118
>KOG0032|consensus
Probab=92.47 E-value=0.11 Score=59.60 Aligned_cols=64 Identities=14% Similarity=0.214 Sum_probs=59.5
Q ss_pred ccCCCCCCCCCcccHHHHHHHHHHHhCCcccccHHHHHHHHhhcCchhHHHhhhhh---hhcccccCCccccccc
Q psy8382 7 VSNSRPRSGFDKGNLEWLEQLFRQTVGDEKEICRDDFKKILITKNISDLYDKVHSF---VWYSSQYGHFTPCYVH 78 (864)
Q Consensus 7 ~~~~~~~~~~~~~~~~~l~~lF~~~~~~d~~l~~~efkkil~~~d~~dl~~k~~~~---~~is~~~~~~~~~~~~ 78 (864)
+||.+||.|.++. ++|..+..++.+++.+.|..+ +..++|++++++.. .+++....+.|||+..
T Consensus 232 L~G~~PF~~~~~~------~~~~~i~~~~~~f~~~~w~~i--s~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~ 298 (382)
T KOG0032|consen 232 LSGVPPFWGETEF------EIFLAILRGDFDFTSEPWDDI--SESAKDFIRKLLEFDPRKRLTAAQALQHPWIKS 298 (382)
T ss_pred hhCCCCCcCCChh------HHHHHHHcCCCCCCCCCcccc--CHHHHHHHHHhcccCcccCCCHHHHhcCccccC
Confidence 7999999999998 888899999999999999998 88999999999888 7899999999999886
No 119
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=91.88 E-value=0.24 Score=32.89 Aligned_cols=25 Identities=28% Similarity=0.497 Sum_probs=22.6
Q ss_pred HHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 225 ALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 225 ~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
.+|+.+|.+++|.|+++||..++..
T Consensus 4 ~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 4 EAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 4899999999999999999998864
No 120
>PF08022 FAD_binding_8: FAD-binding domain; InterPro: IPR013112 This FAD binding domain is associated with ferric reductase NAD binding proteins and the heavy chain of Cytochrome b-245.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=91.64 E-value=0.052 Score=50.54 Aligned_cols=58 Identities=14% Similarity=0.059 Sum_probs=0.0
Q ss_pred hhhcCCceeEeeeccCC--CCCCCCCceEEEecCCCh--hhhhHhhhcCCceechhhHHHHHHh
Q psy8382 525 SQLLGAGYQEEFMKRDN--PKNNKKASTHLVCPTCSG--SKYNAALKWGFPSVNKKWLLECART 584 (864)
Q Consensus 525 i~lLGa~~~e~~~rK~~--~k~~~gq~thLvcp~~sg--~Kw~~A~~w~ipvVt~~WL~~c~~~ 584 (864)
++.++++++++.++++. +++.||||+||.+|..++ ++||++.--++|- .+.|.-.+|.
T Consensus 9 v~~~~~~~v~i~i~~~~~~~~~~pGq~v~l~~p~~s~~~~q~HPFTIas~~~--~~~i~l~ik~ 70 (105)
T PF08022_consen 9 VELLPDDVVEITIPKPSSPFKWKPGQYVFLSFPSISKWFWQWHPFTIASSPE--DNSITLIIKA 70 (105)
T ss_dssp ----------------------------------------------------------------
T ss_pred EEEcCCCEEEEEEECCCCCCCCCCceEEEEEEcCcCcCcccccccEeeccCC--CCEEEEEEEe
Confidence 67889999999999886 578999999999999995 4999997666666 5566655655
No 121
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=90.55 E-value=1 Score=41.00 Aligned_cols=76 Identities=18% Similarity=0.283 Sum_probs=48.8
Q ss_pred hHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHH---hcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhccc
Q psy8382 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACME---ENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHGG 252 (864)
Q Consensus 176 eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~---~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p~ 252 (864)
++|++.+|+.+ .|.+|.++..-|..+|..++. ..|+..+--.++..++..|.... .+-.|+.++|++.|...|.
T Consensus 2 ~dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~~--~~~~I~~~~Fl~wl~~ePq 78 (90)
T PF09069_consen 2 EDKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQVQ--LSPKITENQFLDWLMSEPQ 78 (90)
T ss_dssp HHHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHTT--T-S-B-HHHHHHHHHT--T
T ss_pred hHHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhcccC--CCCccCHHHHHHHHHhCCC
Confidence 48999999999 689999999999999998753 22322111115555666888763 5568999999999999885
Q ss_pred hH
Q psy8382 253 LL 254 (864)
Q Consensus 253 ll 254 (864)
.+
T Consensus 79 ~l 80 (90)
T PF09069_consen 79 SL 80 (90)
T ss_dssp TT
T ss_pred ee
Confidence 43
No 122
>KOG0046|consensus
Probab=90.26 E-value=0.7 Score=53.61 Aligned_cols=74 Identities=14% Similarity=0.197 Sum_probs=60.2
Q ss_pred CCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHH
Q psy8382 125 GFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVM 203 (864)
Q Consensus 125 ~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL 203 (864)
.++.+|+.++.+.|.. | |++|+|+..|+..++... ......-.+++++.+-...+.|.+|.|+.|||-.++
T Consensus 12 ~~tq~El~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~-------~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~ 83 (627)
T KOG0046|consen 12 QLTQEELRELKEKFNKLD-DQKGYVTVYELPDAFKKA-------KLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIF 83 (627)
T ss_pred cccHHHHHHHHHHHHhhc-CCCCeeehHHhHHHHHHh-------cccccchhHHHHHHHHhccCCCcCCccCHHHHHHHH
Confidence 5778899999999999 8 999999999988877543 111122346889999999999999999999999977
Q ss_pred HHH
Q psy8382 204 RAC 206 (864)
Q Consensus 204 ~~l 206 (864)
..+
T Consensus 84 ~~l 86 (627)
T KOG0046|consen 84 LNL 86 (627)
T ss_pred Hhh
Confidence 655
No 123
>KOG0169|consensus
Probab=90.07 E-value=3.5 Score=50.22 Aligned_cols=124 Identities=10% Similarity=0.202 Sum_probs=73.8
Q ss_pred cCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHH----------HHHHH-------------HHHhcCCCChHHH
Q psy8382 124 SGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKN----------EFIDA-------------MHQFAGQSPDDKI 179 (864)
Q Consensus 124 l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~----------EFl~~-------------l~~~~~~~~eekL 179 (864)
.........++...|+. |++++|.+++.+-..++...+ .|... ...........++
T Consensus 128 ~~~~~~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~rpev 207 (746)
T KOG0169|consen 128 MRQRSRREHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTKRPEV 207 (746)
T ss_pred hhhcchHHHHHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhccCchH
Confidence 34445556789999999 999999999999888775432 11110 0000111111156
Q ss_pred HHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhc
Q psy8382 180 KFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKH 250 (864)
Q Consensus 180 ~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~ 250 (864)
..+|..|-.+ .++++.++|..+|... +-....+.+.++++++.+-..-..-..+.++++.|...|...
T Consensus 208 ~~~f~~~s~~-~~~ls~~~L~~Fl~~~--q~e~~~~~~~ae~ii~~~e~~k~~~~~~~l~ldgF~~yL~S~ 275 (746)
T KOG0169|consen 208 YFLFVQYSHG-KEYLSTDDLLRFLEEE--QGEDGATLDEAEEIIERYEPSKEFRRHGLLSLDGFTRYLFSP 275 (746)
T ss_pred HHHHHHHhCC-CCccCHHHHHHHHHHh--cccccccHHHHHHHHHHhhhhhhccccceecHHHHHHHhcCc
Confidence 6666665544 7888888888888765 111245666666633333121222345668888888877653
No 124
>KOG3548|consensus
Probab=89.85 E-value=0.21 Score=61.00 Aligned_cols=49 Identities=29% Similarity=0.457 Sum_probs=41.7
Q ss_pred EEEecC-CChhhhhHhhhcCCceechhhHHHHHHhCCCcCCCccccCCCc
Q psy8382 551 HLVCPT-CSGSKYNAALKWGFPSVNKKWLLECARTGKRVSEQQYLTGSDE 599 (864)
Q Consensus 551 hLvcp~-~sg~Kw~~A~~w~ipvVt~~WL~~c~~~~~~~~e~~y~~~~~~ 599 (864)
+||.-. ....||=.|...|||+|++.||.+|+++++.++..+|++-+|+
T Consensus 990 lLIsdth~Rt~KYLeaLA~giPcVh~~fI~aC~e~nr~Vdy~~YLLpsGy 1039 (1176)
T KOG3548|consen 990 LLISDTHYRTHKYLEALARGIPCVHNTFIQACGEQNRCVDYTDYLLPSGY 1039 (1176)
T ss_pred eEeehhhhHHHHHHHHHHcCCCcccHHHHHHHHhccccccchhhcccCcc
Confidence 444443 3578999999999999999999999999999999999995554
No 125
>KOG3866|consensus
Probab=88.99 E-value=0.76 Score=49.97 Aligned_cols=71 Identities=20% Similarity=0.396 Sum_probs=51.5
Q ss_pred HHHHhhhhcCCCCCccCHHHHHHHHHHHHHhc-CCCCCHHHHHH-------HHHHHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 179 IKFLFRVYDLDGDGLIQHKELQHVMRACMEEN-GMQFSEEQIDH-------LTMALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 179 L~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~-g~~ls~e~i~~-------iv~~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
-+.+|.+.|.|+||+++..||..++..-+... .+.-.++++.+ +-+.+|+.+|.|.|.-||++||+..-.+
T Consensus 246 PKTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~~ 324 (442)
T KOG3866|consen 246 PKTFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTDN 324 (442)
T ss_pred cchheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhhh
Confidence 34589999999999999999999887543322 22222233322 2356788999999999999999887654
No 126
>KOG3555|consensus
Probab=88.31 E-value=0.48 Score=52.24 Aligned_cols=63 Identities=22% Similarity=0.349 Sum_probs=54.4
Q ss_pred hHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhc
Q psy8382 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKH 250 (864)
Q Consensus 176 eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~ 250 (864)
...+.++|..+|.|.||.++..||+.+-.. -.+.-++. +|...|...||.|+-.|++.++.+.
T Consensus 249 Kds~gWMFnklD~N~Dl~Ld~sEl~~I~ld--------knE~Cikp----FfnsCD~~kDg~iS~~EWC~CF~k~ 311 (434)
T KOG3555|consen 249 KDSLGWMFNKLDTNYDLLLDQSELRAIELD--------KNEACIKP----FFNSCDTYKDGSISTNEWCYCFQKS 311 (434)
T ss_pred hhhhhhhhhccccccccccCHHHhhhhhcc--------CchhHHHH----HHhhhcccccCccccchhhhhhccC
Confidence 478999999999999999999999987653 23555666 9999999999999999999999774
No 127
>KOG2243|consensus
Probab=87.37 E-value=3.2 Score=52.48 Aligned_cols=58 Identities=26% Similarity=0.614 Sum_probs=47.7
Q ss_pred HhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q psy8382 182 LFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLE 248 (864)
Q Consensus 182 aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~ 248 (864)
.|+-||.||.|.|+..||..++.. ....+..+++- ++.-+..|.+...+|+||+.-+.
T Consensus 4062 tfkeydpdgkgiiskkdf~kame~-----~k~ytqse~df----llscae~dend~~~y~dfv~rfh 4119 (5019)
T KOG2243|consen 4062 TFKEYDPDGKGIISKKDFHKAMEG-----HKHYTQSEIDF----LLSCAEADENDMFDYEDFVDRFH 4119 (5019)
T ss_pred cchhcCCCCCccccHHHHHHHHhc-----cccchhHHHHH----HHHhhccCccccccHHHHHHHhc
Confidence 488899999999999999998875 34566777766 77777778888999999998764
No 128
>KOG4666|consensus
Probab=86.78 E-value=1.1 Score=49.12 Aligned_cols=68 Identities=18% Similarity=0.140 Sum_probs=55.1
Q ss_pred hHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhc
Q psy8382 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKH 250 (864)
Q Consensus 176 eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~ 250 (864)
.++++..|-+||.+++|.++.-|--..+..+ .|...+.+.++- .|+.++.+.||.+.-++|.-+++..
T Consensus 258 sd~l~~~f~LFde~~tg~~D~re~v~~lavl---c~p~~t~~iiq~----afk~f~v~eDg~~ge~~ls~ilq~~ 325 (412)
T KOG4666|consen 258 SDKLAPTFMLFDEGTTGNGDYRETVKTLAVL---CGPPVTPVIIQY----AFKRFSVAEDGISGEHILSLILQVV 325 (412)
T ss_pred hhhhhhhhheecCCCCCcccHHHHhhhheee---eCCCCcHHHHHH----HHHhcccccccccchHHHHHHHHHh
Confidence 3789999999999999999988776665543 366666666665 9999999999999998888877653
No 129
>KOG1955|consensus
Probab=85.66 E-value=1.3 Score=50.97 Aligned_cols=81 Identities=17% Similarity=0.297 Sum_probs=61.6
Q ss_pred cCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHH
Q psy8382 124 SGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHV 202 (864)
Q Consensus 124 l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~v 202 (864)
..+++++.+++...|+. ..|..|.|+-.--+..+.+ ....-++|..++++.|.|+||-++..||..+
T Consensus 223 w~IT~EQReYYvnQFrtvQpDp~gfisGsaAknFFtK------------Sklpi~ELshIWeLsD~d~DGALtL~EFcAA 290 (737)
T KOG1955|consen 223 WQITPEQREYYVNQFRTVQPDPHGFISGSAAKNFFTK------------SKLPIEELSHIWELSDVDRDGALTLSEFCAA 290 (737)
T ss_pred cccCHHHHHHHHhhhhcccCCcccccccHHHHhhhhh------------ccCchHHHHHHHhhcccCccccccHHHHHhh
Confidence 35678888999999999 8899999987654443321 2345588999999999999999999999999
Q ss_pred HHHHH-HhcCCCCCH
Q psy8382 203 MRACM-EENGMQFSE 216 (864)
Q Consensus 203 L~~l~-~~~g~~ls~ 216 (864)
+..++ +.+|..+.+
T Consensus 291 fHLVVaRkNgypLPe 305 (737)
T KOG1955|consen 291 FHLVVARKNGYPLPE 305 (737)
T ss_pred HhheeecccCCCCCC
Confidence 88653 334554443
No 130
>KOG0607|consensus
Probab=85.22 E-value=1.1 Score=49.54 Aligned_cols=72 Identities=18% Similarity=0.152 Sum_probs=58.8
Q ss_pred cccCCCCCCCCCc-------cc--HHHHHHHHHHHhCCcccccHHHHHHHHhhcCchhHHHhhhhh---hhcccccCCcc
Q psy8382 6 TVSNSRPRSGFDK-------GN--LEWLEQLFRQTVGDEKEICRDDFKKILITKNISDLYDKVHSF---VWYSSQYGHFT 73 (864)
Q Consensus 6 ~~~~~~~~~~~~~-------~~--~~~l~~lF~~~~~~d~~l~~~efkkil~~~d~~dl~~k~~~~---~~is~~~~~~~ 73 (864)
-+|||+||.|.=. .+ +.==+.||.++..|.++|-.+||-.| +..++|++.+++.. .++++..-+.|
T Consensus 284 mLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahI--S~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 284 MLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHI--SSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred HHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHh--hHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 3689999999843 33 33457899999999999999999998 88899999998765 56888888888
Q ss_pred cccccc
Q psy8382 74 PCYVHT 79 (864)
Q Consensus 74 ~~~~~~ 79 (864)
||+-..
T Consensus 362 Pw~~~~ 367 (463)
T KOG0607|consen 362 PWVQRC 367 (463)
T ss_pred cccccc
Confidence 888753
No 131
>PLN02952 phosphoinositide phospholipase C
Probab=83.00 E-value=6.9 Score=47.36 Aligned_cols=96 Identities=11% Similarity=0.202 Sum_probs=64.5
Q ss_pred CCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCC-CCCHHHHHH
Q psy8382 143 GDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGM-QFSEEQIDH 221 (864)
Q Consensus 143 d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~-~ls~e~i~~ 221 (864)
++.|.++++||... ...+. ........++..+|..|-.++ +.++.++|..+|... .+. ..+.++++.
T Consensus 12 ~~~g~l~f~~f~~f-------~~~~k-~~~~~~r~ei~~lf~~~~~~~-~~mt~~~l~~FL~~~---Q~e~~~~~~~~~~ 79 (599)
T PLN02952 12 NDSGSYNYKMFNLF-------NRKFK-ITEAEPPDDVKDVFCKFSVGG-GHMGADQLRRFLVLH---QDELDCTLAEAQR 79 (599)
T ss_pred ccCCCcCHHHHHHH-------HHHhc-cccCCChHHHHHHHHHHhCCC-CccCHHHHHHHHHHh---CCCcCCCHHHHHH
Confidence 34689999998642 22221 112235689999999996544 689999999999975 233 356777777
Q ss_pred HHHHHHHHhc---CCCCcceeHHHHHHHHHhc
Q psy8382 222 LTMALFEDAD---SENRGAITYESLKNQLEKH 250 (864)
Q Consensus 222 iv~~if~~~D---~d~dG~IsfeEF~~~l~~~ 250 (864)
+++.++.... ..+.+.++++.|...+...
T Consensus 80 i~~~~~~~~~~~~~~~~~~l~~~~F~~~l~s~ 111 (599)
T PLN02952 80 IVEEVINRRHHVTRYTRHGLNLDDFFHFLLYD 111 (599)
T ss_pred HHHHHHhhccccccccccCcCHHHHHHHHcCc
Confidence 6665554422 1233468999999998753
No 132
>KOG0042|consensus
Probab=81.71 E-value=2.1 Score=50.39 Aligned_cols=64 Identities=14% Similarity=0.286 Sum_probs=56.9
Q ss_pred HHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 178 KIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 178 kL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
..+.-|..+|.|+.|+++.+++.++|+.. +.+++++.+++ +++++|.+-+|.+...||.+++..
T Consensus 594 ~~~~rf~~lD~~k~~~~~i~~v~~vlk~~----~~~~d~~~~~~----~l~ea~~~~~g~v~l~e~~q~~s~ 657 (680)
T KOG0042|consen 594 RRKTRFAFLDADKKAYQAIADVLKVLKSE----NVGWDEDRLHE----ELQEADENLNGFVELREFLQLMSA 657 (680)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHHh----cCCCCHHHHHH----HHHHHHHhhcceeeHHHHHHHHHH
Confidence 46678999999999999999999999986 56788998888 889999988999999999998865
No 133
>KOG0615|consensus
Probab=80.98 E-value=0.85 Score=51.92 Aligned_cols=66 Identities=15% Similarity=0.076 Sum_probs=58.5
Q ss_pred cccCCCCCCCCCcccHHHHHHHHHHHhCCcccccHHHHHHHHhhcCchhHHHhhhhh---hhcccccCCccccccc
Q psy8382 6 TVSNSRPRSGFDKGNLEWLEQLFRQTVGDEKEICRDDFKKILITKNISDLYDKVHSF---VWYSSQYGHFTPCYVH 78 (864)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~l~~lF~~~~~~d~~l~~~efkkil~~~d~~dl~~k~~~~---~~is~~~~~~~~~~~~ 78 (864)
.+||++||++.... ..+.+++..|..-+-...|.++ +..+.||++.|+.. .+.+.+.++.|||+.+
T Consensus 374 cLsG~pPFS~~~~~-----~sl~eQI~~G~y~f~p~~w~~I--seea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~ 442 (475)
T KOG0615|consen 374 CLSGYPPFSEEYTD-----PSLKEQILKGRYAFGPLQWDRI--SEEALDLINWMLVVDPENRPSADEALNHPWFKD 442 (475)
T ss_pred EeccCCCcccccCC-----ccHHHHHhcCcccccChhhhhh--hHHHHHHHHHhhEeCcccCcCHHHHhcChhhhc
Confidence 57999999999888 2377789999999999999999 88888999999988 7899999999999986
No 134
>KOG4065|consensus
Probab=80.33 E-value=4 Score=38.56 Aligned_cols=73 Identities=16% Similarity=0.199 Sum_probs=45.1
Q ss_pred CCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHH---hcCCCChHHHH----HHhhhhcCCCCCccCH
Q psy8382 125 GFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQ---FAGQSPDDKIK----FLFRVYDLDGDGLIQH 196 (864)
Q Consensus 125 ~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~---~~~~~~eekL~----~aFk~fD~dgdG~Is~ 196 (864)
.++++++ -...|.. |.|++|.|+--|+..++... ..+-.. -.....+.++. .+.+--|.|+||+|++
T Consensus 62 ~mtpeql--qfHYF~MHDldknn~lDGiEl~kAiTH~---H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDY 136 (144)
T KOG4065|consen 62 KMTPEQL--QFHYFSMHDLDKNNFLDGIELLKAITHT---HDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDY 136 (144)
T ss_pred hCCHHHH--hhhhhhhhccCcCCcchHHHHHHHHHHH---hhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeH
Confidence 4566442 3457888 99999999999987776432 110000 00112233443 3455568999999999
Q ss_pred HHHHHH
Q psy8382 197 KELQHV 202 (864)
Q Consensus 197 eELr~v 202 (864)
.||...
T Consensus 137 gEflK~ 142 (144)
T KOG4065|consen 137 GEFLKR 142 (144)
T ss_pred HHHHhh
Confidence 998653
No 135
>KOG0604|consensus
Probab=80.32 E-value=1.4 Score=48.48 Aligned_cols=69 Identities=12% Similarity=0.031 Sum_probs=55.1
Q ss_pred ccCCCCCCCCCcccHHHHHHHHHHHhCCcccccHHHHHHHHhhcCchhHHHhhhhh---hhcccccCCcccccccc
Q psy8382 7 VSNSRPRSGFDKGNLEWLEQLFRQTVGDEKEICRDDFKKILITKNISDLYDKVHSF---VWYSSQYGHFTPCYVHT 79 (864)
Q Consensus 7 ~~~~~~~~~~~~~~~~~l~~lF~~~~~~d~~l~~~efkkil~~~d~~dl~~k~~~~---~~is~~~~~~~~~~~~~ 79 (864)
+||||||..--. +.-....-+++..|..+|-.+||-.+ +.++||++++++.. .+++-..-+.|+|+...
T Consensus 257 LCGyPPFYS~hg--~aispgMk~rI~~gqy~FP~pEWs~V--Se~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 257 LCGYPPFYSNHG--LAISPGMKRRIRTGQYEFPEPEWSCV--SEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY 328 (400)
T ss_pred hcCCCcccccCC--ccCChhHHhHhhccCccCCChhHhHH--HHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence 699999986433 22223344568889999999999999 99999999999877 67888888999999873
No 136
>KOG4347|consensus
Probab=78.87 E-value=1.8 Score=51.64 Aligned_cols=59 Identities=22% Similarity=0.390 Sum_probs=50.1
Q ss_pred HHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHH
Q psy8382 130 NLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKEL 199 (864)
Q Consensus 130 eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eEL 199 (864)
...-+..+|+. |.+++|.|++.+| +.++..+..++.-++++.+|++||.+++ ..+.+|.
T Consensus 553 s~~~~~rlF~l~D~s~~g~Ltf~~l----------v~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 553 SLIFLERLFRLLDDSMTGLLTFKDL----------VSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHHHHhcccCCcceeEHHHH----------HHHHHHHHhhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 34567789999 9999999999994 5566666777777999999999999999 9999998
No 137
>KOG4347|consensus
Probab=78.21 E-value=12 Score=45.00 Aligned_cols=118 Identities=16% Similarity=0.188 Sum_probs=76.1
Q ss_pred HHHhhhhhcCCCHHHHHHHHHHHhh--hcCCCC----cccHHHHHHHHHhHHHHHHHHHHhcCC-CChHHHHHHhhhhcC
Q psy8382 116 HNLVCLPRSGFDKGNLEWLEQLFRQ--TVGDEK----EICRDDFKKILITKNEFIDAMHQFAGQ-SPDDKIKFLFRVYDL 188 (864)
Q Consensus 116 el~~l~~~l~fs~~eieeL~~~F~~--D~d~dG----~I~~eEF~~~l~~~~EFl~~l~~~~~~-~~eekL~~aFk~fD~ 188 (864)
.++.+.+...++.++++.|+.+|.. -.+.-| ..+++-|.+. .....|...+..+..- ....-+..+|+.+|.
T Consensus 488 ~lrs~~~~~~lt~~dL~~lYd~f~~e~~~~~~~~~~~~p~~~~~eqy-i~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~ 566 (671)
T KOG4347|consen 488 ILRSVVQTTSLTNTDLENLYDLFKEEHLTNSIGLGRSDPDFEAFEQY-IDYAQFLEVFRELLPWAVSLIFLERLFRLLDD 566 (671)
T ss_pred HHHhhcccCccCHHHHHHHHHHHHHHHhccCcccCCCCCCchHHHHH-HHHhhHHHHhhccCchhHHHHHHHHHHHhccc
Confidence 4556667778899999999999987 332222 3444444444 2222233333222111 233568889999999
Q ss_pred CCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHH
Q psy8382 189 DGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESL 243 (864)
Q Consensus 189 dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF 243 (864)
+++|.|+..+|-.-|..+. .. ++.+-+..+++-+|.+++ ..+.+|-
T Consensus 567 s~~g~Ltf~~lv~gL~~l~-------~~-~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 567 SMTGLLTFKDLVSGLSILK-------AG-DALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred CCcceeEHHHHHHHHHHHH-------hh-hHHHHHHHHHhhccCCcc-ccccccc
Confidence 9999999999998887752 12 222334458899999888 7777775
No 138
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=77.76 E-value=13 Score=36.06 Aligned_cols=87 Identities=15% Similarity=0.208 Sum_probs=56.3
Q ss_pred HHhhhhhcCCCHHHHHHHHHHHhh-hc--CCCCcccHHHHHHHHHhHHHHHHHHHHhcCCC----------ChHHHHHHh
Q psy8382 117 NLVCLPRSGFDKGNLEWLEQLFRQ-TV--GDEKEICRDDFKKILITKNEFIDAMHQFAGQS----------PDDKIKFLF 183 (864)
Q Consensus 117 l~~l~~~l~fs~~eieeL~~~F~~-D~--d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~----------~eekL~~aF 183 (864)
++.+++.+.++.=++..+.+.|+. .. ..|..|+..|+..++... |...-....... .+--+.++.
T Consensus 26 LR~lQk~~~l~lv~l~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~i--y~~l~~~~p~~~~i~~~~v~~a~~L~ln~Ll 103 (127)
T PF09068_consen 26 LRFLQKRLCLDLVDLSNVIEAFREHGLNQSNDSSLSVSQLETLLSSI--YEFLNKRLPTLHQIPSRPVDLAVDLLLNWLL 103 (127)
T ss_dssp HHHHHHHTTGGG--HHHHHHHHHHTT---T-TSEEEHHHHHHHHHHH--HHHHHHHSTTS--HH-----HHHHHHHHHHH
T ss_pred HHHHHHHHhheeeeHHHHHHHHHHcCCCcccCCCCCHHHHHHHHHHH--HHHHHHHCCCCCCCCchhHHHHHHHHHHHHH
Confidence 456677777777788888899988 22 236779999999988776 322222111111 123478899
Q ss_pred hhhcCCCCCccCHHHHHHHHHH
Q psy8382 184 RVYDLDGDGLIQHKELQHVMRA 205 (864)
Q Consensus 184 k~fD~dgdG~Is~eELr~vL~~ 205 (864)
.+||.+++|.|+.-+++-+|..
T Consensus 104 ~vyD~~rtG~I~vls~KvaL~~ 125 (127)
T PF09068_consen 104 NVYDSQRTGKIRVLSFKVALIT 125 (127)
T ss_dssp HHH-TT--SEEEHHHHHHHHHH
T ss_pred HHhCCCCCCeeehhHHHHHHHH
Confidence 9999999999999999987754
No 139
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=74.55 E-value=14 Score=37.54 Aligned_cols=68 Identities=12% Similarity=0.200 Sum_probs=44.1
Q ss_pred hHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCC--CCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHH
Q psy8382 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQ--FSEEQIDHLTMALFEDADSENRGAITYESLKNQL 247 (864)
Q Consensus 176 eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~--ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l 247 (864)
.++++.+|..|++.+.+.+|..|+.++++.--. .... .....++=.+ .-.+-.+.||.+..|+-..++
T Consensus 95 p~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~-~~D~~GW~a~~~EW~~---~y~L~~d~dG~l~Ke~iR~vY 164 (174)
T PF05042_consen 95 PQKFEEIFSKYAKTGPDALTLRELWRMLKGNRN-ANDPFGWFAAFFEWGA---LYILAKDKDGFLSKEDIRGVY 164 (174)
T ss_pred HHHHHHHHHHhCCCCCCCcCHHHHHHHHHhccc-cCCcchhhhhhhHHHH---HHHHHcCcCCcEeHHHHhhhc
Confidence 478999999999999999999999999986200 0000 1111222211 112235678999988876654
No 140
>KOG1955|consensus
Probab=74.28 E-value=5.3 Score=46.19 Aligned_cols=62 Identities=19% Similarity=0.354 Sum_probs=53.3
Q ss_pred HHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHH
Q psy8382 177 DKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLE 248 (864)
Q Consensus 177 ekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~ 248 (864)
+....-|+..-.|-+|+|+-.--++++... ++.-+++.. |.+..|.|.||-++++||+..|.
T Consensus 231 eYYvnQFrtvQpDp~gfisGsaAknFFtKS------klpi~ELsh----IWeLsD~d~DGALtL~EFcAAfH 292 (737)
T KOG1955|consen 231 EYYVNQFRTVQPDPHGFISGSAAKNFFTKS------KLPIEELSH----IWELSDVDRDGALTLSEFCAAFH 292 (737)
T ss_pred HHHHhhhhcccCCcccccccHHHHhhhhhc------cCchHHHHH----HHhhcccCccccccHHHHHhhHh
Confidence 446667999999999999999999988753 577778777 89999999999999999998874
No 141
>KOG3555|consensus
Probab=72.95 E-value=3.5 Score=45.71 Aligned_cols=60 Identities=18% Similarity=0.251 Sum_probs=50.2
Q ss_pred HHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHH
Q psy8382 132 EWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRA 205 (864)
Q Consensus 132 eeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~ 205 (864)
.++.=||.. |.|.||.|+..|+..+.. ...+.=++.+|+..|...||.|+-+|+..-+..
T Consensus 250 ds~gWMFnklD~N~Dl~Ld~sEl~~I~l--------------dknE~CikpFfnsCD~~kDg~iS~~EWC~CF~k 310 (434)
T KOG3555|consen 250 DSLGWMFNKLDTNYDLLLDQSELRAIEL--------------DKNEACIKPFFNSCDTYKDGSISTNEWCYCFQK 310 (434)
T ss_pred hhhhhhhhccccccccccCHHHhhhhhc--------------cCchhHHHHHHhhhcccccCccccchhhhhhcc
Confidence 467779999 999999999999765442 334566889999999999999999999988765
No 142
>KOG3524|consensus
Probab=72.71 E-value=2.6 Score=50.61 Aligned_cols=66 Identities=18% Similarity=0.288 Sum_probs=53.5
Q ss_pred CCCcceehhhhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecCCChhhhhHhhhcCCceechhhHHHHHHhC
Q psy8382 509 SKPHVVTVEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPTCSGSKYNAALKWGFPSVNKKWLLECARTG 585 (864)
Q Consensus 509 S~s~v~~~er~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~~sg~Kw~~A~~w~ipvVt~~WL~~c~~~~ 585 (864)
++++....+. .+..++..+||-+...+..|. |||+|....|.||..|..- .|++-++||.+|.+..
T Consensus 125 cfTg~rkk~e-~lv~lvh~mgg~irkd~nskt---------thli~n~s~gek~~~a~t~-~~~~rp~wv~~aw~~r 190 (850)
T KOG3524|consen 125 CFTGERKKKE-ELVDLVHYMGGSIRKDTNSKT---------THLIANKVEGEKQSIALVG-VPTMRPDWVTEAWKHR 190 (850)
T ss_pred eeeccchhhH-HHHHHHHHhcceeEeeeccCc---------eEEEeecccceEEEEEeec-cceechHhhhhhhcCc
Confidence 3444444443 566778899998888877766 8999999999999999776 9999999999998864
No 143
>PRK07956 ligA NAD-dependent DNA ligase LigA; Validated
Probab=72.50 E-value=4.3 Score=49.95 Aligned_cols=67 Identities=18% Similarity=0.211 Sum_probs=55.9
Q ss_pred CCcce-ehhhhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecCCChhhhhHhhhcCCceechhhHHHHHHhC
Q psy8382 510 KPHVV-TVEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPTCSGSKYNAALKWGFPSVNKKWLLECARTG 585 (864)
Q Consensus 510 ~s~v~-~~er~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~~sg~Kw~~A~~w~ipvVt~~WL~~c~~~~ 585 (864)
+++.. ...|..+..+++.+||.+..-..++. .||||-.-.|.|..+|++.||||++-+-+.+.+.++
T Consensus 598 ~TG~l~~~~R~e~~~~i~~~G~~v~~sVs~kt---------~~lv~G~~~gsK~~kA~~lgI~ii~E~~f~~~l~~~ 665 (665)
T PRK07956 598 LTGTLEQLSRDEAKEKLEALGAKVSGSVSKKT---------DLVVAGEAAGSKLAKAQELGIEVLDEEEFLRLLGEG 665 (665)
T ss_pred EeCCCCCCCHHHHHHHHHHcCCEEeCcccCCC---------CEEEECCCCChHHHHHHHcCCeEEcHHHHHHHHhcC
Confidence 44433 33688899999999999999866665 799999888899999999999999999998887654
No 144
>KOG1707|consensus
Probab=71.70 E-value=15 Score=43.83 Aligned_cols=70 Identities=17% Similarity=0.206 Sum_probs=46.0
Q ss_pred HHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCC-CHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHH--Hhccch
Q psy8382 177 DKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQF-SEEQIDHLTMALFEDADSENRGAITYESLKNQL--EKHGGL 253 (864)
Q Consensus 177 ekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~l-s~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l--~~~p~l 253 (864)
+.+..+|..||.|+||.++.+||..++... +... ......+ ..-.+..|.++|+-|+... +...++
T Consensus 315 ~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~----P~~pW~~~~~~~-------~t~~~~~G~ltl~g~l~~WsL~Tlld~ 383 (625)
T KOG1707|consen 315 RFLVDVFEKFDRDNDGALSPEELKDLFSTA----PGSPWTSSPYKD-------STVKNERGWLTLNGFLSQWSLMTLLDP 383 (625)
T ss_pred HHHHHHHHhccCCCCCCcCHHHHHHHhhhC----CCCCCCCCcccc-------cceecccceeehhhHHHHHHHHhhccH
Confidence 468889999999999999999999999875 2111 1110001 1122367999999998753 334444
Q ss_pred HHHH
Q psy8382 254 LENL 257 (864)
Q Consensus 254 l~~l 257 (864)
...+
T Consensus 384 ~~t~ 387 (625)
T KOG1707|consen 384 RRTL 387 (625)
T ss_pred HHHH
Confidence 4433
No 145
>PRK06063 DNA polymerase III subunit epsilon; Provisional
Probab=71.20 E-value=4.7 Score=45.10 Aligned_cols=58 Identities=17% Similarity=0.199 Sum_probs=49.8
Q ss_pred hhhhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecCCCh--hhhhHhhhcCCceechhhHHHHH
Q psy8382 516 VEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPTCSG--SKYNAALKWGFPSVNKKWLLECA 582 (864)
Q Consensus 516 ~er~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~~sg--~Kw~~A~~w~ipvVt~~WL~~c~ 582 (864)
..|..++.+++.+|+.+..-..+|. .||||-...| .|-.+|.+.||||++-+=+.+-+
T Consensus 246 ~~R~e~~~~~~~~G~~v~~sVs~~t---------~~lv~g~~~~~ssK~~kA~~~gi~ii~e~~f~~ll 305 (313)
T PRK06063 246 RTHEELVERILHAGLAYSDSVDRDT---------SLVVCNDPAPEQGKGYHARQLGVPVLDEAAFLELL 305 (313)
T ss_pred CCHHHHHHHHHHcCCEecCccccCc---------cEEEECCCCCcccHHHHHHHcCCccccHHHHHHHH
Confidence 4788899999999999999877776 7999988766 79999999999999987666655
No 146
>PRK14350 ligA NAD-dependent DNA ligase LigA; Provisional
Probab=66.87 E-value=6.9 Score=48.14 Aligned_cols=59 Identities=14% Similarity=-0.031 Sum_probs=51.1
Q ss_pred ehhhhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecCCChhhhhHhhhcCCceechhhHHHHH
Q psy8382 515 TVEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPTCSGSKYNAALKWGFPSVNKKWLLECA 582 (864)
Q Consensus 515 ~~er~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~~sg~Kw~~A~~w~ipvVt~~WL~~c~ 582 (864)
...|....++++.+||++..-..+|. .|||+-+-.|.|.++|++.||||++-+.+.+-+
T Consensus 607 ~~~R~e~~~lie~~Ggkv~ssVSkkt---------d~LV~G~~aGsKl~KA~~LGI~Ii~e~~f~~~l 665 (669)
T PRK14350 607 GYSRSVLIDKLTKKGAIFNTCVTKYL---------DFLLVGEKAGLKLKKANNLGIKIMSLFDIKSYV 665 (669)
T ss_pred CCCHHHHHHHHHHcCCEEeccccCCC---------cEEEECCCCCchHHHHHHcCCEEecHHHHHHHh
Confidence 34688899999999999999866665 799999888899999999999999998887744
No 147
>KOG0035|consensus
Probab=66.67 E-value=12 Score=46.91 Aligned_cols=72 Identities=19% Similarity=0.174 Sum_probs=58.0
Q ss_pred hHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCH-HHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhcc
Q psy8382 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSE-EQIDHLTMALFEDADSENRGAITYESLKNQLEKHG 251 (864)
Q Consensus 176 eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~-e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p 251 (864)
.++++..|.-+|+...|.++.+++...|..+ |.+..+ +++.+-...++...|.+..|.++|.+|...|.+.-
T Consensus 746 ~~ElrAle~~~~~~d~~aa~~e~~~~~Lmsl----g~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~ 818 (890)
T KOG0035|consen 746 LDELRALENEQDKIDGGAASPEELLRCLMSL----GYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREY 818 (890)
T ss_pred HHHHHHHHhHHHHhhcccCCHHHHHHHHHhc----CcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhh
Confidence 3689999999999999999999999999886 776654 44444444566777888889999999999987643
No 148
>KOG1029|consensus
Probab=66.62 E-value=11 Score=46.03 Aligned_cols=72 Identities=21% Similarity=0.323 Sum_probs=55.4
Q ss_pred HHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHH-H
Q psy8382 130 NLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRAC-M 207 (864)
Q Consensus 130 eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l-~ 207 (864)
..-...++|+. |+..+|.|+-..-+.+|. ..+.+...|..++.+-|.|+||.++.+||.-.+..+ +
T Consensus 193 ~klKY~QlFNa~DktrsG~Lsg~qaR~aL~------------qS~Lpq~~LA~IW~LsDvd~DGkL~~dEfilam~liem 260 (1118)
T KOG1029|consen 193 NKLKYRQLFNALDKTRSGYLSGQQARSALG------------QSGLPQNQLAHIWTLSDVDGDGKLSADEFILAMHLIEM 260 (1118)
T ss_pred hhhHHHHHhhhcccccccccccHHHHHHHH------------hcCCchhhHhhheeeeccCCCCcccHHHHHHHHHHHHH
Confidence 44577899999 999999999887666553 235566789999999999999999999998766544 2
Q ss_pred HhcCCC
Q psy8382 208 EENGMQ 213 (864)
Q Consensus 208 ~~~g~~ 213 (864)
...|..
T Consensus 261 a~sGq~ 266 (1118)
T KOG1029|consen 261 AKSGQP 266 (1118)
T ss_pred HhcCCC
Confidence 334543
No 149
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=65.77 E-value=18 Score=36.18 Aligned_cols=66 Identities=14% Similarity=0.380 Sum_probs=45.2
Q ss_pred HHHHhhhh---cCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 179 IKFLFRVY---DLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 179 L~~aFk~f---D~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
|+.+|..| -..+...++...|..+++.+ ...+..++..+++- +|..+-..+...|+|++|+.+|..
T Consensus 1 L~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~-~i~d~k~t~tdvDi----iF~Kvk~k~~~~I~f~~F~~aL~~ 69 (154)
T PF05517_consen 1 LEAVFKAFASFGKKNGTEMDSKNFAKLCKDC-GIIDKKLTSTDVDI----IFSKVKAKGARKITFEQFLEALAE 69 (154)
T ss_dssp HHHHHHHHHCSSTSTSSEEEHHHHHHHHHHT-SS--SSS-HHHHHH----HHHHHT-SS-SEEEHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCccccccHHHHHHHHHHc-CCCCCCCchHHHHH----HHHHhhcCCCcccCHHHHHHHHHH
Confidence 34555555 45566779999999999986 11133477777776 888877666678999999999865
No 150
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=65.34 E-value=12 Score=37.99 Aligned_cols=77 Identities=18% Similarity=0.304 Sum_probs=53.7
Q ss_pred HHHHHhhhhcCCCCCccCHHHHHHHHHHH-----HH---------------------------------------hcC--
Q psy8382 178 KIKFLFRVYDLDGDGLIQHKELQHVMRAC-----ME---------------------------------------ENG-- 211 (864)
Q Consensus 178 kL~~aFk~fD~dgdG~Is~eELr~vL~~l-----~~---------------------------------------~~g-- 211 (864)
.|+.=...||.|+||.|..-|--.-++.+ ++ -+|
T Consensus 8 ~LQqHvaFFDrd~DGiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lSy~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg~Y 87 (174)
T PF05042_consen 8 VLQQHVAFFDRDKDGIIYPWDTYQGFRALGFGILLSLLAAFIIHGALSYPTQPSWIPDPFFRIYIKNIHKGKHGSDSGAY 87 (174)
T ss_pred HHhhhhceeCCCCCeeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccCCccCCCCCCCCceeEEeecccccccCCCcccc
Confidence 34555567999999999999887766654 00 000
Q ss_pred ---CCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhccchHHHHH
Q psy8382 212 ---MQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHGGLLENLS 258 (864)
Q Consensus 212 ---~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p~ll~~l~ 258 (864)
-++..+..++ ||.+.+..+.+.+|+.|..+|+..+-+....++
T Consensus 88 D~eGrFvp~kFe~----iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~G 133 (174)
T PF05042_consen 88 DTEGRFVPQKFEE----IFSKYAKTGPDALTLRELWRMLKGNRNANDPFG 133 (174)
T ss_pred ccCCcCCHHHHHH----HHHHhCCCCCCCcCHHHHHHHHHhccccCCcch
Confidence 0223445566 899999888889999999999988766555444
No 151
>KOG4578|consensus
Probab=61.69 E-value=6.3 Score=43.54 Aligned_cols=65 Identities=20% Similarity=0.316 Sum_probs=48.5
Q ss_pred HHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHH
Q psy8382 132 EWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRA 205 (864)
Q Consensus 132 eeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~ 205 (864)
+-+.=.|.. |.|.++.|+..|.+- |-..+. .......=.+.+|+..|.|+|-.||.+|++..|..
T Consensus 333 Rvv~w~F~qLdkN~nn~i~rrEwKp-------FK~~l~--k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~ 398 (421)
T KOG4578|consen 333 RVVHWYFNQLDKNSNNDIERREWKP-------FKRVLL--KKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGV 398 (421)
T ss_pred heeeeeeeeecccccCccchhhcch-------HHHHHH--hhccHHHHhhhcchhcccCCCceecHHHHhhhhcc
Confidence 345557888 999999999999654 322222 12233455788999999999999999999998865
No 152
>PRK06195 DNA polymerase III subunit epsilon; Validated
Probab=61.20 E-value=9.9 Score=42.37 Aligned_cols=65 Identities=18% Similarity=0.155 Sum_probs=50.8
Q ss_pred CCcce-ehhhhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecCC---------ChhhhhHhhhc-----CCceec
Q psy8382 510 KPHVV-TVEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPTC---------SGSKYNAALKW-----GFPSVN 574 (864)
Q Consensus 510 ~s~v~-~~er~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~~---------sg~Kw~~A~~w-----~ipvVt 574 (864)
+++.. ...|.....+++.+||.+..-..+|. +||||-.. .|.|.++|++. ||+|++
T Consensus 228 fTG~l~~~~R~~~~~~~~~~Gg~v~~sVs~~t---------~~lV~G~~~~~~~~~~~~~~K~~kA~~l~~~g~~i~ii~ 298 (309)
T PRK06195 228 FTGGLASMTRDEAMILVRRLGGTVGSSVTKKT---------TYLVTNTKDIEDLNREEMSNKLKKAIDLKKKGQNIKFLN 298 (309)
T ss_pred EccccCCCCHHHHHHHHHHhCCEecCCcccCc---------eEEEECCCcchhhcccCcChHHHHHHHHHhCCCCcEEec
Confidence 44433 45688899999999999999866665 89999853 36899999998 999998
Q ss_pred hhhHHHHHH
Q psy8382 575 KKWLLECAR 583 (864)
Q Consensus 575 ~~WL~~c~~ 583 (864)
-+=+.+-++
T Consensus 299 E~~f~~l~~ 307 (309)
T PRK06195 299 EEEFLQKCK 307 (309)
T ss_pred HHHHHHHHh
Confidence 776655554
No 153
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=61.15 E-value=10 Score=46.06 Aligned_cols=59 Identities=20% Similarity=0.216 Sum_probs=51.3
Q ss_pred ehhhhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecCCChhhhhHhhhcCCceechhhHHHHH
Q psy8382 515 TVEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPTCSGSKYNAALKWGFPSVNKKWLLECA 582 (864)
Q Consensus 515 ~~er~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~~sg~Kw~~A~~w~ipvVt~~WL~~c~ 582 (864)
...|...+++++.+||++..-..+|. .|||.-.--|.|+.+|++.||+|.+-+++.+-+
T Consensus 608 ~~sR~eak~~le~lGakv~~SVSkkt---------D~vvaG~~aGSKl~kA~eLgv~i~~E~~~~~ll 666 (667)
T COG0272 608 GMSRDEAKALLEALGAKVSGSVSKKT---------DYVVAGENAGSKLAKAQELGVKIIDEEEFLALL 666 (667)
T ss_pred CCCHHHHHHHHHHcCCEEeceecccc---------cEEEEcCCCChHHHHHHHcCCeEecHHHHHHhh
Confidence 35577889999999999999877765 799999999999999999999999998887643
No 154
>KOG1707|consensus
Probab=59.95 E-value=25 Score=42.13 Aligned_cols=42 Identities=21% Similarity=0.568 Sum_probs=31.0
Q ss_pred HHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHH
Q psy8382 177 DKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDH 221 (864)
Q Consensus 177 ekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~ 221 (864)
..|..+|++.|.|+||.++-+|+-.+=+.++ +..+...+++.
T Consensus 195 ~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF---~~pl~p~~l~~ 236 (625)
T KOG1707|consen 195 KALKRIFKISDSDNDGALSDAELNDFQKKCF---NTPLDPQELED 236 (625)
T ss_pred HHHHHHHhhhccccccccchhhhhHHHHHhc---CCCCCHHHHHH
Confidence 3588899999999999999999988766653 44444444433
No 155
>PRK14351 ligA NAD-dependent DNA ligase LigA; Provisional
Probab=59.41 E-value=12 Score=46.37 Aligned_cols=66 Identities=15% Similarity=0.089 Sum_probs=54.7
Q ss_pred CCcce-ehhhhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecCCCh-hhhhHhhhcCCceechhhHHHHHHh
Q psy8382 510 KPHVV-TVEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPTCSG-SKYNAALKWGFPSVNKKWLLECART 584 (864)
Q Consensus 510 ~s~v~-~~er~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~~sg-~Kw~~A~~w~ipvVt~~WL~~c~~~ 584 (864)
+++.. ...|.....+++.+||.+..-..++. .|||+-.-.| .|..+|++.||+|++-+-+.+-+++
T Consensus 617 ~TG~l~~~~R~~~~~~i~~~Gg~v~~sVs~kt---------~~Lv~G~~~g~sKl~kA~~lgi~ii~E~~f~~ll~~ 684 (689)
T PRK14351 617 FTGSLSGYTRSEAQELVEAHGGNATGSVSGNT---------DYLVVGENPGQSKRDDAEANDVPTLDEEEFEELLAE 684 (689)
T ss_pred EccCCCCCCHHHHHHHHHHcCCEEcCCcCCCc---------cEEEEcCCCChhHHHHHHHCCCeEecHHHHHHHHHh
Confidence 44433 34688899999999999998866665 7999988777 8999999999999999988887776
No 156
>KOG0169|consensus
Probab=59.28 E-value=16 Score=44.76 Aligned_cols=75 Identities=17% Similarity=0.317 Sum_probs=57.4
Q ss_pred hHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHh---ccc
Q psy8382 176 DDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEK---HGG 252 (864)
Q Consensus 176 eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~---~p~ 252 (864)
+..+..+|+..|++++|.++..|..++++.+ ...+.+..+.. +|++.|..++|++..++|.+.... .|+
T Consensus 135 ~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~----n~~l~~~~~~~----~f~e~~~~~~~k~~~~~~~~~~~~~~~rpe 206 (746)
T KOG0169|consen 135 EHWIHSIFQEADKNKNGHMSFDEVLDLLKQL----NVQLSESKARR----LFKESDNSQTGKLEEEEFVKFRKELTKRPE 206 (746)
T ss_pred HHHHHHHHHHHccccccccchhhHHHHHHHH----HHhhhHHHHHH----HHHHHHhhccceehHHHHHHHHHhhccCch
Confidence 3457788999999999999999999999986 44455555555 888888889999999988876544 344
Q ss_pred hHHHHH
Q psy8382 253 LLENLS 258 (864)
Q Consensus 253 ll~~l~ 258 (864)
+...|.
T Consensus 207 v~~~f~ 212 (746)
T KOG0169|consen 207 VYFLFV 212 (746)
T ss_pred HHHHHH
Confidence 444433
No 157
>KOG0966|consensus
Probab=57.92 E-value=12 Score=45.95 Aligned_cols=82 Identities=15% Similarity=0.172 Sum_probs=58.3
Q ss_pred cchhhcccCCCcceehh-hhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecC---CChhhhhHhhhcCCceechh
Q psy8382 501 HKLYACLSSKPHVVTVE-WLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPT---CSGSKYNAALKWGFPSVNKK 576 (864)
Q Consensus 501 drl~r~v~S~s~v~~~e-r~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~---~sg~Kw~~A~~w~ipvVt~~ 576 (864)
+.+-.|+ ++++...+ +..+.+++...||.++.....+. ++.+|-+ -.+.++.+++. ++-||.+.
T Consensus 635 ~gl~f~V--lsgt~~~~tk~~le~~ivenGG~iv~nv~p~~---------~~ci~~a~~et~~vk~~~~~~-~cdVl~p~ 702 (881)
T KOG0966|consen 635 DGLEFCV--LSGTSETHTKAKLEEIIVENGGKIVQNVGPSD---------TLCIATAGKETTRVKAQAIKR-SCDVLKPA 702 (881)
T ss_pred cCeeEEE--ecCCcccccHHHHHHHHHHcCCEEEEcCCCCC---------cceEEeccccchHHHHHHHhc-cCceeeHH
Confidence 3344555 44445444 46778888888998887655543 6766633 34677777766 99999999
Q ss_pred hHHHHHHhCCCcCCCccc
Q psy8382 577 WLLECARTGKRVSEQQYL 594 (864)
Q Consensus 577 WL~~c~~~~~~~~e~~y~ 594 (864)
||.+|++..+.++-.++.
T Consensus 703 Wlldcc~~~~l~p~~P~~ 720 (881)
T KOG0966|consen 703 WLLDCCKKQRLLPWLPRD 720 (881)
T ss_pred HHHHHHhhhhccccccHH
Confidence 999999999988877553
No 158
>KOG2481|consensus
Probab=55.90 E-value=11 Score=44.07 Aligned_cols=49 Identities=14% Similarity=0.308 Sum_probs=38.6
Q ss_pred ceEEEecCCC-hhhhhHhhhcCCceechhhHHHHHHhCCCcCCCccccCCCcccC
Q psy8382 549 STHLVCPTCS-GSKYNAALKWGFPSVNKKWLLECARTGKRVSEQQYLTGSDEASQ 602 (864)
Q Consensus 549 ~thLvcp~~s-g~Kw~~A~~w~ipvVt~~WL~~c~~~~~~~~e~~y~~~~~~~~~ 602 (864)
.||=||-.|+ +.++. |-..|-+.||.||+-+|.+++-+.|.+|..-.|.
T Consensus 373 ITH~IvDrP~~~~~v~-----gR~YvQPQWvfDsvNar~llpt~~Y~~G~~LPpH 422 (570)
T KOG2481|consen 373 ITHQIVDRPGQQTSVI-----GRTYVQPQWVFDSVNARLLLPTEKYFPGKALPPH 422 (570)
T ss_pred eeeeeecccCccceee-----eeeeecchhhhhhccchhhccHhhhCCCccCCcc
Confidence 3777776554 33333 7889999999999999999999999998766543
No 159
>KOG0323|consensus
Probab=54.06 E-value=5.2 Score=48.51 Aligned_cols=50 Identities=26% Similarity=0.322 Sum_probs=44.2
Q ss_pred eEEEecCCChhhhhHhhhcC-CceechhhHHHHHHhCCCcCCCccccCCCc
Q psy8382 550 THLVCPTCSGSKYNAALKWG-FPSVNKKWLLECARTGKRVSEQQYLTGSDE 599 (864)
Q Consensus 550 thLvcp~~sg~Kw~~A~~w~-ipvVt~~WL~~c~~~~~~~~e~~y~~~~~~ 599 (864)
+|+|--.++..|=..|.+-+ +.||+++||+.|+..+.+++|..|......
T Consensus 484 th~i~~~~gt~k~~~a~~~~~~~Vv~~~wl~~~~e~w~~v~ek~~~l~~~~ 534 (635)
T KOG0323|consen 484 THLIAANAGTKKVYKAVVSGSAKVVNAAWLWRSLEKWGKVEEKLEPLDDDQ 534 (635)
T ss_pred hhHHhhccCcceeeccccccceeEechhHHHHHHHHhcchhcccccccccc
Confidence 89999999988888888885 999999999999999999999999665433
No 160
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=51.44 E-value=99 Score=31.39 Aligned_cols=53 Identities=13% Similarity=0.187 Sum_probs=36.5
Q ss_pred CCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Q psy8382 172 GQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFED 229 (864)
Q Consensus 172 ~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~ 229 (864)
+-....++..+++.+-.++..-|+.++|...+.- |..++.++++..|+.++..
T Consensus 80 klkt~~Ql~AA~~Yl~~~~~~~~d~~~Fe~~cGV-----GV~VT~E~I~~~V~~~i~~ 132 (164)
T PF04558_consen 80 KLKTNLQLDAALKYLKSNPSEPIDVAEFEKACGV-----GVVVTPEQIEAAVEKYIEE 132 (164)
T ss_dssp S--SHHHHHHHHHHHHHHGG-G--HHHHHHTTTT-----T----HHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHcCC-----CeEECHHHHHHHHHHHHHH
Confidence 3346788999999988777778999999988764 8889999999988777765
No 161
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=50.85 E-value=29 Score=30.41 Aligned_cols=63 Identities=19% Similarity=0.404 Sum_probs=45.0
Q ss_pred HHHHHHhhhcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCC--CChHHHHHHhhhhcCC----CCCccCHHHHHHHHHH
Q psy8382 133 WLEQLFRQTVGDEKEICRDDFKKILITKNEFIDAMHQFAGQ--SPDDKIKFLFRVYDLD----GDGLIQHKELQHVMRA 205 (864)
Q Consensus 133 eL~~~F~~D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~--~~eekL~~aFk~fD~d----gdG~Is~eELr~vL~~ 205 (864)
+|..+|..-.++.+.|+.++|...|.. ..+. ...+.++.++..|..+ ..+.+|.++|..+|.+
T Consensus 1 ei~~if~~ys~~~~~mt~~~f~~FL~~----------eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S 69 (83)
T PF09279_consen 1 EIEEIFRKYSSDKEYMTAEEFRRFLRE----------EQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFS 69 (83)
T ss_dssp HHHHHHHHHCTTSSSEEHHHHHHHHHH----------TSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHS
T ss_pred CHHHHHHHHhCCCCcCCHHHHHHHHHH----------HhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCC
Confidence 356677762237889999998765432 2222 2568888999998665 4799999999999975
No 162
>KOG3548|consensus
Probab=49.28 E-value=9.7 Score=47.36 Aligned_cols=42 Identities=26% Similarity=0.347 Sum_probs=38.3
Q ss_pred eEEEecCCChhhhhHhhhcCCceechhhHHHHHHhCCCcCCC
Q psy8382 550 THLVCPTCSGSKYNAALKWGFPSVNKKWLLECARTGKRVSEQ 591 (864)
Q Consensus 550 thLvcp~~sg~Kw~~A~~w~ipvVt~~WL~~c~~~~~~~~e~ 591 (864)
+||.|+.+-...-+.|-+.++|+|+.+||.+||-.|.....+
T Consensus 1120 vvl~d~~~~~svmk~ad~l~~pvvs~EWvIQtiI~~~~i~~~ 1161 (1176)
T KOG3548|consen 1120 VVLVDGTFRDSVMKYADTLGAPVVSSEWVIQTIILGKAIEPN 1161 (1176)
T ss_pred EEEecCccHHHHHHHHHHhCCCccChhHhheeeeccccCCcc
Confidence 799999999988889999999999999999999999877655
No 163
>KOG4403|consensus
Probab=48.66 E-value=78 Score=36.52 Aligned_cols=62 Identities=18% Similarity=0.204 Sum_probs=38.9
Q ss_pred HHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHH
Q psy8382 132 EWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRAC 206 (864)
Q Consensus 132 eeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l 206 (864)
+.++.+-+. |.|.+|.|+.+|=. ||+.- .+...+...+-...|.- .|-.||.+||.++....
T Consensus 68 EAir~iHrqmDDD~nG~Id~~ESd-------eFlrE--dmky~~~~~kr~~~fH~----dD~~ItVedLWeaW~~S 130 (575)
T KOG4403|consen 68 EAIRDIHRQMDDDHNGSIDVEESD-------EFLRE--DMKYRDSTRKRSEKFHG----DDKHITVEDLWEAWKES 130 (575)
T ss_pred HHHHHHHHhcccccCCCcccccch-------HHHHH--HhhcccchhhhhhhccC----CccceeHHHHHHHHHhh
Confidence 345555555 66999999999833 33321 12223344455556654 46689999999998864
No 164
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=47.14 E-value=18 Score=31.32 Aligned_cols=30 Identities=13% Similarity=0.393 Sum_probs=25.4
Q ss_pred CChHHHHHHhhhhcCCCCCccCHHHHHHHHH
Q psy8382 174 SPDDKIKFLFRVYDLDGDGLIQHKELQHVMR 204 (864)
Q Consensus 174 ~~eekL~~aFk~fD~dgdG~Is~eELr~vL~ 204 (864)
...+.+..+|+.+ .++.++||.+||++.|.
T Consensus 3 ~s~eqv~~aFr~l-A~~KpyVT~~dLr~~l~ 32 (69)
T PF08726_consen 3 DSAEQVEEAFRAL-AGGKPYVTEEDLRRSLT 32 (69)
T ss_dssp STCHHHHHHHHHH-CTSSSCEEHHHHHHHS-
T ss_pred CCHHHHHHHHHHH-HcCCCcccHHHHHHHcC
Confidence 3458999999999 78889999999998764
No 165
>COG5275 BRCT domain type II [General function prediction only]
Probab=46.77 E-value=28 Score=36.51 Aligned_cols=60 Identities=12% Similarity=0.092 Sum_probs=49.4
Q ss_pred hhhhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecC-CChhhhhHhhhcCCceechhhHHHHHHh
Q psy8382 516 VEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPT-CSGSKYNAALKWGFPSVNKKWLLECART 584 (864)
Q Consensus 516 ~er~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~-~sg~Kw~~A~~w~ipvVt~~WL~~c~~~ 584 (864)
++|..-..+++.+||.|+..-..|. +||+.-. +...|-+.+++.+||+++-+=+...|+.
T Consensus 171 lsR~~a~~lvk~yGgrvT~~pSskT---------tflvlGdnaGP~K~ekiKqlkIkaidEegf~~LI~~ 231 (276)
T COG5275 171 LSRDDAKTLVKVYGGRVTAVPSSKT---------TFLVLGDNAGPSKMEKIKQLKIKAIDEEGFDSLIKD 231 (276)
T ss_pred ccchhHHHHHHHhCCeeecccccce---------eEEEecCCCChHHHHHHHHhCCccccHHHHHHHHhc
Confidence 6788889999999999999755554 7888875 5678999999999999998877766653
No 166
>TIGR00575 dnlj DNA ligase, NAD-dependent. The member of this family from Treponema pallidum differs in having three rather than just one copy of the BRCT (BRCA1 C Terminus) domain (pfam00533) at the C-terminus. It is included in the seed.
Probab=46.45 E-value=17 Score=44.70 Aligned_cols=52 Identities=21% Similarity=0.309 Sum_probs=45.7
Q ss_pred hhhhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecCCChhhhhHhhhcCCceechh
Q psy8382 516 VEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPTCSGSKYNAALKWGFPSVNKK 576 (864)
Q Consensus 516 ~er~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~~sg~Kw~~A~~w~ipvVt~~ 576 (864)
..|.....+++.+||.+..-..+|. .||||-.-.|.|.++|++.||||++-+
T Consensus 599 ~~R~~~~~~i~~~G~~v~~sVs~kt---------~~lv~G~~~gsKl~kA~~lgi~ii~E~ 650 (652)
T TIGR00575 599 MSRDEAKELLENLGGKVASSVSKKT---------DYVIAGEKAGSKLAKAQELGIPIINEE 650 (652)
T ss_pred CCHHHHHHHHHHcCCEEeCCcCCCc---------cEEEECCCCChHHHHHHHcCCcEechh
Confidence 4688899999999999998866665 799999888899999999999999865
No 167
>KOG0998|consensus
Probab=46.34 E-value=11 Score=47.72 Aligned_cols=64 Identities=22% Similarity=0.378 Sum_probs=52.6
Q ss_pred HHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhc
Q psy8382 177 DKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKH 250 (864)
Q Consensus 177 ekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~ 250 (864)
.++..+|...|.+++|+|+..+.+.++... .++...+.. +...+|.+++|.+++++|.-.+-..
T Consensus 283 ~~~~~if~q~d~~~dG~I~s~~~~~~f~~~------gl~~~~l~~----~w~l~d~~n~~~ls~~ef~~~~~~~ 346 (847)
T KOG0998|consen 283 QKYSKIFSQVDKDNDGSISSNEARNIFLPF------GLSKPRLAH----VWLLADTQNTGTLSKDEFALAMHLL 346 (847)
T ss_pred HHHHHHHHhccccCCCcccccccccccccC------CCChhhhhh----hhhhcchhccCcccccccchhhhhh
Confidence 467778999999999999999999988753 366677776 7888999999999999887665443
No 168
>KOG0599|consensus
Probab=44.74 E-value=6.5 Score=42.90 Aligned_cols=62 Identities=10% Similarity=0.199 Sum_probs=49.2
Q ss_pred CCCCCCCCCcccHHHHHHHHHHHhCCcccccHHHHHHHHhhcCchhHHHhhhhh---hhcccccCCccccccc
Q psy8382 9 NSRPRSGFDKGNLEWLEQLFRQTVGDEKEICRDDFKKILITKNISDLYDKVHSF---VWYSSQYGHFTPCYVH 78 (864)
Q Consensus 9 ~~~~~~~~~~~~~~~l~~lF~~~~~~d~~l~~~efkkil~~~d~~dl~~k~~~~---~~is~~~~~~~~~~~~ 78 (864)
|.+||-+.-.- =..+-+..|..+|.-+||..+ +.+.|||+.+++.. .+|++..++.|++++.
T Consensus 224 GcpPFwHRkQm------lMLR~ImeGkyqF~speWadi--s~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 224 GCPPFWHRKQM------LMLRMIMEGKYQFRSPEWADI--SATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred CCCchhHHHHH------HHHHHHHhcccccCCcchhhc--cccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 55666553211 233447889999999999998 99999999998877 7899999999999975
No 169
>PF09842 DUF2069: Predicted membrane protein (DUF2069); InterPro: IPR018643 This family of prokaryotic proteins has no known function but is thought to be a membrane protein.
Probab=44.04 E-value=1.7e+02 Score=27.71 Aligned_cols=104 Identities=17% Similarity=0.289 Sum_probs=60.7
Q ss_pred hhhHHHHHHHHHHhhhhhhhhccccceeehhhhcccccccchhhHHHHHHHHHHHHhhhhcCCcceeeCCchhhHHHHHH
Q psy8382 302 LGFMFFYLLVNIVLFTSRMYVFRKSNYYVIFARACGQCLNFNCMFVLVLMLRHCITFLRTRGFSVFLPLDQHIYFHKMTG 381 (864)
Q Consensus 302 ~~~l~l~l~~~i~lf~~~~~~y~~~~~~~~iaRg~g~~l~~n~alillpv~Rn~it~LR~t~l~~~ipfD~~i~fHk~ig 381 (864)
.+.++.|+++.+.+..|..+.-.... +..+..+.+-...+++|+ + -.+| .+..-|.|.+
T Consensus 2 ~lal~~~~aLi~l~~~w~~~~~p~~~------~~~~~~l~l~~lPLLl~l-~---Gll~-----------g~~~t~~W~s 60 (109)
T PF09842_consen 2 RLALASYFALILLLLLWELWLAPPEL------RPGGSWLALKLLPLLLPL-P---GLLR-----------GRPYTYAWAS 60 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCccc------CcHHHHHHHHHHHHHHHH-H---HHHc-----------CCHHHHHHHH
Confidence 45567777777777777666644321 111111222222233332 2 2233 4567899999
Q ss_pred HHHHHHHHHHHHHHhhhcccccccCCccccCCcceeeeccccCCcccccccccccchhHHHHHHHHHHHHhcccccccc
Q psy8382 382 FFIFGYSVLHTIMHLLNFSLNVLGDGTINKKGLSLTEWLFTSRPGLFGLINGWANPTGVCLIIILTIMFICSQTFVRKS 460 (864)
Q Consensus 382 ~~i~~~~~lH~iah~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~TG~~~~l~l~lm~~~S~~~vRR~ 460 (864)
++++++.+ |++..... + |+ .-+.|++.+++.+++|++++-++|-+
T Consensus 61 fv~L~YF~-~gv~~a~~-------~------------------~~--------~~~~a~~e~~ls~~lF~~~~~y~R~r 105 (109)
T PF09842_consen 61 FVILLYFI-HGVTRAWS-------D------------------PG--------ERWLAWLELLLSVLLFVGAMLYARWR 105 (109)
T ss_pred HHHHHHHH-HHHHHHhc-------C------------------cc--------hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888765 66654321 0 00 01258888888888999999888865
No 170
>COG5163 NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis]
Probab=43.27 E-value=11 Score=42.50 Aligned_cols=50 Identities=20% Similarity=0.371 Sum_probs=40.7
Q ss_pred CceEEEecCCC-hhhhhHhhhcCCceechhhHHHHHHhCCCcCCCccccCCCcccC
Q psy8382 548 ASTHLVCPTCS-GSKYNAALKWGFPSVNKKWLLECARTGKRVSEQQYLTGSDEASQ 602 (864)
Q Consensus 548 q~thLvcp~~s-g~Kw~~A~~w~ipvVt~~WL~~c~~~~~~~~e~~y~~~~~~~~~ 602 (864)
..||-+|-.|- ..|++ |...|.+.||+|||-.|.+...+.|.+|..-.|.
T Consensus 396 ~vth~i~drp~~~~kve-----grtYiQPQw~fDsiNkG~l~~~~~Y~~G~~LPpH 446 (591)
T COG5163 396 KVTHQIVDRPVMKNKVE-----GRTYIQPQWLFDSINKGKLACVENYCVGKRLPPH 446 (591)
T ss_pred hhhhhhccchhhhhhhc-----ceeeechHHHHhhhccccchhhhhccccccCCCC
Confidence 34788887764 45555 8899999999999999999999999998766543
No 171
>PLN02223 phosphoinositide phospholipase C
Probab=43.16 E-value=79 Score=37.95 Aligned_cols=76 Identities=13% Similarity=0.008 Sum_probs=57.0
Q ss_pred CChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHhc----CCCCcceeHHHHHHHHH
Q psy8382 174 SPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGM-QFSEEQIDHLTMALFEDAD----SENRGAITYESLKNQLE 248 (864)
Q Consensus 174 ~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~-~ls~e~i~~iv~~if~~~D----~d~dG~IsfeEF~~~l~ 248 (864)
.+.+.++.+|..|- +++|.++.+.|+++|.-+....|+ ..+.++.+.+++.++.... ..+.+.++++.|...+.
T Consensus 13 ~~p~~v~~~f~~~~-~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~l~~~~f~~~L~ 91 (537)
T PLN02223 13 NQPDLILNFFGNEF-HGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRCLELDHLNEFLF 91 (537)
T ss_pred CCcHHHHHHHHHhh-cCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhccccCHHHHHHHhc
Confidence 46689999999994 788999999999999655444453 4678888887777765432 12336699999999987
Q ss_pred hc
Q psy8382 249 KH 250 (864)
Q Consensus 249 ~~ 250 (864)
..
T Consensus 92 s~ 93 (537)
T PLN02223 92 ST 93 (537)
T ss_pred Cc
Confidence 64
No 172
>PF10192 GpcrRhopsn4: Rhodopsin-like GPCR transmembrane domain; InterPro: IPR019336 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes). They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). This region of 270 amino acids is the seven transmembrane alpha-helical domains included within five GPCRRHODOPSN4 motifs of a G-protein-coupled-receptor (GPCR) protein, conserved from nematodes to humans [].
Probab=42.77 E-value=1e+02 Score=33.28 Aligned_cols=75 Identities=21% Similarity=0.298 Sum_probs=39.8
Q ss_pred HHhhhhhhhhccccceeehhhhccccccc----chhhHHHHHHHHHHHHhhhhcCCcceeeCCchhhHHHHHHHHHHHHH
Q psy8382 313 IVLFTSRMYVFRKSNYYVIFARACGQCLN----FNCMFVLVLMLRHCITFLRTRGFSVFLPLDQHIYFHKMTGFFIFGYS 388 (864)
Q Consensus 313 i~lf~~~~~~y~~~~~~~~iaRg~g~~l~----~n~alillpv~Rn~it~LR~t~l~~~ipfD~~i~fHk~ig~~i~~~~ 388 (864)
+.+....+..|..+..+....+..|.++. .-+.++|+-++.+. |..|. .. ...-+.++..++++.+
T Consensus 77 ~~l~~ih~~~ya~nG~G~~~l~~~g~i~~~~s~~~~~lLLllla~Gw-Ti~~~-------~~--s~~~~~~~~~~~~~~~ 146 (257)
T PF10192_consen 77 LLLNLIHYIVYAYNGVGIPFLKVLGQIFDILSQILFLLLLLLLAKGW-TITRS-------RL--SQSNSVKLIVFIILYV 146 (257)
T ss_pred HHHHHHHHHHHHccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHccc-ccccC-------cc--chhhHHHHHHHHHHHH
Confidence 33334445566666666655555555443 33455566666552 22221 01 1114455666677778
Q ss_pred HHHHHHHhh
Q psy8382 389 VLHTIMHLL 397 (864)
Q Consensus 389 ~lH~iah~~ 397 (864)
++|.+..+.
T Consensus 147 ~~~~~l~i~ 155 (257)
T PF10192_consen 147 VLQVILFIW 155 (257)
T ss_pred HHHHHHHHH
Confidence 888887766
No 173
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=42.30 E-value=63 Score=30.03 Aligned_cols=59 Identities=22% Similarity=0.260 Sum_probs=38.1
Q ss_pred HHHHHHHHhh-hcCCCCcccHHHHHHHHHhHH--HHHHHHHHhcCCCChHHHHHHhhhhcC---CCCCccCHHHHHHHHH
Q psy8382 131 LEWLEQLFRQ-TVGDEKEICRDDFKKILITKN--EFIDAMHQFAGQSPDDKIKFLFRVYDL---DGDGLIQHKELQHVMR 204 (864)
Q Consensus 131 ieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~--EFl~~l~~~~~~~~eekL~~aFk~fD~---dgdG~Is~eELr~vL~ 204 (864)
-..+.+.|+. -. ||.|...+|.+++...+ ||.. ++|+.+-. -..+.|+.+||+++..
T Consensus 29 W~~VE~RFd~La~--dG~L~rs~Fg~CIGM~dSkeFA~---------------eLFdALaRrr~i~~~~I~k~eL~efW~ 91 (100)
T PF08414_consen 29 WKEVEKRFDKLAK--DGLLPRSDFGECIGMKDSKEFAG---------------ELFDALARRRGIKGDSITKDELKEFWE 91 (100)
T ss_dssp HHHHHHHHHHH-B--TTBEEGGGHHHHHT--S-HHHHH---------------HHHHHHHHHTT--SSEE-HHHHHHHHH
T ss_pred HHHHHHHHHHhCc--CCcccHHHHHHhcCCcccHHHHH---------------HHHHHHHHhcCCccCCcCHHHHHHHHH
Confidence 4788999998 43 99999999999987542 3332 22332211 1146799999999987
Q ss_pred HH
Q psy8382 205 AC 206 (864)
Q Consensus 205 ~l 206 (864)
.+
T Consensus 92 qi 93 (100)
T PF08414_consen 92 QI 93 (100)
T ss_dssp HH
T ss_pred Hh
Confidence 75
No 174
>KOG1265|consensus
Probab=40.66 E-value=1.6e+02 Score=37.11 Aligned_cols=74 Identities=14% Similarity=0.185 Sum_probs=55.7
Q ss_pred CChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHH------hcCCCCCHHHHHHHHHHHHHHhcCCC----CcceeHHHH
Q psy8382 174 SPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACME------ENGMQFSEEQIDHLTMALFEDADSEN----RGAITYESL 243 (864)
Q Consensus 174 ~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~------~~g~~ls~e~i~~iv~~if~~~D~d~----dG~IsfeEF 243 (864)
.+..++..+|..+-.++.-|+|.++|-++|+.--+ ..-+....+++.. +++....|+ +|.++-+-|
T Consensus 218 cpR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~----liekyEp~~~~a~~gqms~dgf 293 (1189)
T KOG1265|consen 218 CPRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQS----LIEKYEPNSDNAEKGQMSTDGF 293 (1189)
T ss_pred CCchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHH----HHHHcCCchhhhhccccchhhh
Confidence 44567999999999888899999999999986410 0112345667777 777766654 699999999
Q ss_pred HHHHHhcc
Q psy8382 244 KNQLEKHG 251 (864)
Q Consensus 244 ~~~l~~~p 251 (864)
+..+..++
T Consensus 294 ~ryl~gdE 301 (1189)
T KOG1265|consen 294 VRYLMGDE 301 (1189)
T ss_pred HHHhhCCc
Confidence 99998843
No 175
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=39.40 E-value=43 Score=33.04 Aligned_cols=73 Identities=19% Similarity=0.183 Sum_probs=42.8
Q ss_pred CcCCHHHHHhhhhhcCCCHHHHHHHHHHHhh-----hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhh
Q psy8382 110 TSLRIHHNLVCLPRSGFDKGNLEWLEQLFRQ-----TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFR 184 (864)
Q Consensus 110 ~~L~~~el~~l~~~l~fs~~eieeL~~~F~~-----D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk 184 (864)
+.|+++|+.++++-..++.+.++.+.+-|.. --+..+.|+++.|+..|... +....+++-.+.+|.
T Consensus 6 ~~lsp~eF~qLq~y~eys~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~y---------Le~d~P~~lc~hLF~ 76 (138)
T PF14513_consen 6 VSLSPEEFAQLQKYSEYSTKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTY---------LEVDLPEDLCQHLFL 76 (138)
T ss_dssp S-S-HHHHHHHHHHHHH----HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHH---------TT-S--HHHHHHHHH
T ss_pred eccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHH---------HcCCCCHHHHHHHHH
Confidence 5788999999999888888889999999964 12446689999998765432 222356777888888
Q ss_pred hhcCCCC
Q psy8382 185 VYDLDGD 191 (864)
Q Consensus 185 ~fD~dgd 191 (864)
.|-....
T Consensus 77 sF~~~~~ 83 (138)
T PF14513_consen 77 SFQKKPP 83 (138)
T ss_dssp HS-----
T ss_pred HHhCccc
Confidence 8865543
No 176
>KOG0035|consensus
Probab=37.30 E-value=97 Score=39.25 Aligned_cols=85 Identities=12% Similarity=0.134 Sum_probs=62.2
Q ss_pred hccCcCCHHHHHhhhhhcCCCHHH----HHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHH
Q psy8382 107 VAYTSLRIHHNLVCLPRSGFDKGN----LEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKF 181 (864)
Q Consensus 107 ~~s~~L~~~el~~l~~~l~fs~~e----ieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~ 181 (864)
...+.+..+++......+|++.++ +.++..+... |.+..|.+++.+|.+.|... ....+.++++..
T Consensus 759 ~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~---------~e~l~~~~r~i~ 829 (890)
T KOG0035|consen 759 IDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLERE---------YEDLDTELRAIL 829 (890)
T ss_pred hhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhh---------hhhhcHHHHHHH
Confidence 445678889999998899988766 3344444445 66667899999987665433 233456788999
Q ss_pred HhhhhcCCCCCccCHHHHHH
Q psy8382 182 LFRVYDLDGDGLIQHKELQH 201 (864)
Q Consensus 182 aFk~fD~dgdG~Is~eELr~ 201 (864)
+|+.+-++.. +|..+||..
T Consensus 830 s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 830 AFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred HHHHHHcchh-HHHHHHHHh
Confidence 9999887777 888888887
No 177
>PF14358 DUF4405: Domain of unknown function (DUF4405)
Probab=36.33 E-value=38 Score=28.42 Aligned_cols=24 Identities=21% Similarity=0.332 Sum_probs=21.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHH
Q psy8382 372 QHIYFHKMTGFFIFGYSVLHTIMH 395 (864)
Q Consensus 372 ~~i~fHk~ig~~i~~~~~lH~iah 395 (864)
..-..|.+.|+.++++..+|...|
T Consensus 40 ~~~~iH~~~g~~~~~l~~~Hl~lh 63 (64)
T PF14358_consen 40 FWRNIHLWAGYLFLILIILHLGLH 63 (64)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445899999999999999999877
No 178
>KOG3524|consensus
Probab=34.94 E-value=34 Score=41.66 Aligned_cols=84 Identities=15% Similarity=0.035 Sum_probs=57.1
Q ss_pred hcccCCCcceehhhhhhhhhhhhcCCceeEeeeccCCCCCCCCCceEEEecCCChhhhhHhhhcCCceechhhHHHHHHh
Q psy8382 505 ACLSSKPHVVTVEWLKQTKLSQLLGAGYQEEFMKRDNPKNNKKASTHLVCPTCSGSKYNAALKWGFPSVNKKWLLECART 584 (864)
Q Consensus 505 r~v~S~s~v~~~er~~l~~li~lLGa~~~e~~~rK~~~k~~~gq~thLvcp~~sg~Kw~~A~~w~ipvVt~~WL~~c~~~ 584 (864)
++..++.+|...|..+.-...+.-||.+.. -...+ +||++-+---.----+..-..-+|..+|.|-+|..
T Consensus 213 g~~~~f~gF~~ee~~~m~~sle~~gg~~a~-~d~~c---------thvvv~e~~~~~~p~~~s~~~~~vk~ewfw~siq~ 282 (850)
T KOG3524|consen 213 GLSLFFHGFKQEEIDDMLRSLENTGGKLAP-SDTLC---------THVVVNEDNDEVEPLAVSSNQVHVKKEWFWVSIQR 282 (850)
T ss_pred CCeEeecCCcHHHHHHHHHHHHhcCCcccC-CCCCc---------eeEeecCCccccccccccccceeecccceEEEEec
Confidence 455556666777777766667777887666 24444 78887753222222233345677888999999999
Q ss_pred CCCcCCCccccCCC
Q psy8382 585 GKRVSEQQYLTGSD 598 (864)
Q Consensus 585 ~~~~~e~~y~~~~~ 598 (864)
|...-|..|+.+.+
T Consensus 283 g~~a~e~~yl~~~~ 296 (850)
T KOG3524|consen 283 GCCAIEDNYLLPTG 296 (850)
T ss_pred chhccccceecccc
Confidence 99999999988655
No 179
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=33.09 E-value=72 Score=27.75 Aligned_cols=40 Identities=18% Similarity=0.290 Sum_probs=32.1
Q ss_pred HHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHH
Q psy8382 167 MHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRAC 206 (864)
Q Consensus 167 l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l 206 (864)
+..+.+.-+.+++..+...|+.=..|.|+.+||-..++.+
T Consensus 15 ~~~l~~~l~~~~~~~l~~~Y~~~k~~kIsR~~fvr~lR~I 54 (70)
T PF12174_consen 15 FSALSKHLPPSKMDLLQKHYEEFKKKKISREEFVRKLRQI 54 (70)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 3344445566788888888888889999999999999987
No 180
>cd06186 NOX_Duox_like_FAD_NADP NADPH oxidase (NOX) catalyzes the generation of reactive oxygen species (ROS) such as superoxide and hydrogen peroxide. ROS were originally identified as bactericidal agents in phagocytes, but are now also implicated in cell signaling and metabolism. NOX has a 6-alpha helix heme-binding transmembrane domain fused to a flavoprotein with the nucleotide binding domain located in the cytoplasm. Duox enzymes link a peroxidase domain to the NOX domain via a single transmembrane and EF-hand Ca2+ binding sites. The flavoprotein module has a ferredoxin like FAD/NADPH binding domain. In classical phagocytic NOX2, electron transfer occurs from NADPH to FAD to the heme of cytb to oxygen leading to superoxide formation.
Probab=32.33 E-value=36 Score=34.99 Aligned_cols=41 Identities=15% Similarity=-0.021 Sum_probs=30.8
Q ss_pred hhhcC-CceeEeeeccC-CCCCCCCCceEEEecCC-ChhhhhHh
Q psy8382 525 SQLLG-AGYQEEFMKRD-NPKNNKKASTHLVCPTC-SGSKYNAA 565 (864)
Q Consensus 525 i~lLG-a~~~e~~~rK~-~~k~~~gq~thLvcp~~-sg~Kw~~A 565 (864)
++.++ .++.++.++.+ ...+.||||++|.+|.. +.++||+.
T Consensus 4 ~~~~~~~~~~~l~~~~~~~~~~~pGq~v~l~~~~~~~~~~~hpf 47 (210)
T cd06186 4 VELLPDSDVIRLTIPKPKPFKWKPGQHVYLNFPSLLSFWQSHPF 47 (210)
T ss_pred EEEecCCCEEEEEEecCCCCccCCCCEEEEEeCCCCCCcccCCc
Confidence 34566 78888888776 34678999999999987 55667654
No 181
>TIGR01848 PHA_reg_PhaR polyhydroxyalkanoate synthesis repressor PhaR. Poly-B-hydroxyalkanoates are lipidlike carbon/energy storage polymers found in granular inclusions. PhaR is a regulatory protein found in general near other proteins associated with polyhydroxyalkanoate (PHA) granule biosynthesis and utilization. It is found to be a DNA-binding homotetramer that is also capable of binding short chain hydroxyalkanoic acids and PHA granules. PhaR may regulate the expression of itself, of the phasins that coat granules, and of enzymes that direct carbon flux into polymers stored in granules.
Probab=30.86 E-value=85 Score=29.56 Aligned_cols=63 Identities=11% Similarity=0.299 Sum_probs=39.6
Q ss_pred hhhcCCCCCccCHHHHHHHHHHHH------HhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhc
Q psy8382 184 RVYDLDGDGLIQHKELQHVMRACM------EENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKH 250 (864)
Q Consensus 184 k~fD~dgdG~Is~eELr~vL~~l~------~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~ 250 (864)
++||.+.+-|||.++++++++.-- ..+|.+++...+-+ ++-+....+...++-+=..++++-.
T Consensus 10 RLYDT~tS~YITLedi~~lV~~g~~f~V~DakTgeDiT~~iL~Q----II~E~E~~g~~~lp~~~L~qlIr~y 78 (107)
T TIGR01848 10 RLYDTETSSYVTLEDIRDLVREGREFQVVDSKSGDDLTRSILLQ----IIAEEESGGEPVLSTDFLTQIIRFY 78 (107)
T ss_pred cccCCCccceeeHHHHHHHHHCCCeEEEEECCCCchhHHHHHHH----HHHHHHhCCCCCCCHHHHHHHHHHh
Confidence 579999999999999999998620 11233344444444 5555555566666665555555443
No 182
>KOG2871|consensus
Probab=29.86 E-value=43 Score=37.96 Aligned_cols=68 Identities=25% Similarity=0.365 Sum_probs=46.5
Q ss_pred CCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHH
Q psy8382 173 QSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQL 247 (864)
Q Consensus 173 ~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l 247 (864)
..+.+.++.+|+.+|..++|+|+-.-++.++... +.-+++...-. .+=...|+..-|.|=.++|...+
T Consensus 305 ~~~s~q~rR~f~a~d~~d~nfis~s~~~~vm~~~----N~~vse~a~v~---l~~~~l~pE~~~iil~~d~lg~~ 372 (449)
T KOG2871|consen 305 ENPSEQLRRNFHAYDPEDNNFISCSGLQIVMTAL----NRLVSEPAYVM---LMRQPLDPESLGIILLEDFLGEF 372 (449)
T ss_pred CCCCHHHHhhhhccCccCCCeeecHHHHHHHHHh----cccccCHHHHH---HhcCccChhhcceEEeccccccc
Confidence 3457899999999999999999999999999875 32333333221 13334666666666666665443
No 183
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=29.35 E-value=1.5e+02 Score=28.84 Aligned_cols=72 Identities=22% Similarity=0.221 Sum_probs=46.3
Q ss_pred HHHHHHhhhhcCCC--CCccCHHHHHHHHHHHHHhcC---CCCC-------HHHHHHHHHHHHHHhcCCCCcceeHHHHH
Q psy8382 177 DKIKFLFRVYDLDG--DGLIQHKELQHVMRACMEENG---MQFS-------EEQIDHLTMALFEDADSENRGAITYESLK 244 (864)
Q Consensus 177 ekL~~aFk~fD~dg--dG~Is~eELr~vL~~l~~~~g---~~ls-------~e~i~~iv~~if~~~D~d~dG~IsfeEF~ 244 (864)
..+..+|+....+. |..|+..|+..+|..++.... +... +.-++-.+..++.-+|.++.|.|+.-.|.
T Consensus 41 ~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy~~l~~~~p~~~~i~~~~v~~a~~L~ln~Ll~vyD~~rtG~I~vls~K 120 (127)
T PF09068_consen 41 SNVIEAFREHGLNQSNDSSLSVSQLETLLSSIYEFLNKRLPTLHQIPSRPVDLAVDLLLNWLLNVYDSQRTGKIRVLSFK 120 (127)
T ss_dssp HHHHHHHHHTT---T-TSEEEHHHHHHHHHHHHHHHHHHSTTS--HH-----HHHHHHHHHHHHHH-TT--SEEEHHHHH
T ss_pred HHHHHHHHHcCCCcccCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCchhHHHHHHHHHHHHHHHhCCCCCCeeehhHHH
Confidence 44566677665544 467999999999999873221 1111 23455667788889999999999999988
Q ss_pred HHHH
Q psy8382 245 NQLE 248 (864)
Q Consensus 245 ~~l~ 248 (864)
.++.
T Consensus 121 vaL~ 124 (127)
T PF09068_consen 121 VALI 124 (127)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 184
>PLN02230 phosphoinositide phospholipase C 4
Probab=28.54 E-value=1.7e+02 Score=35.84 Aligned_cols=74 Identities=18% Similarity=0.253 Sum_probs=51.3
Q ss_pred CChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHhc---CCCCcceeHHHHHHHHHh
Q psy8382 174 SPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGM-QFSEEQIDHLTMALFEDAD---SENRGAITYESLKNQLEK 249 (864)
Q Consensus 174 ~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~-~ls~e~i~~iv~~if~~~D---~d~dG~IsfeEF~~~l~~ 249 (864)
.+..+++.+|..|-.++ ++++.++|..+|... +.+. ..+.++++.+++.+..... .-+.+.++++.|...+..
T Consensus 26 ~p~~ei~~lf~~~s~~~-~~mt~~~l~~FL~~~--Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL~s 102 (598)
T PLN02230 26 GPVADVRDLFEKYADGD-AHMSPEQLQKLMAEE--GGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFS 102 (598)
T ss_pred CCcHHHHHHHHHHhCCC-CccCHHHHHHHHHHh--CCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHHHcC
Confidence 35689999999996444 899999999999974 1112 3456677776555544322 123456999999998876
Q ss_pred c
Q psy8382 250 H 250 (864)
Q Consensus 250 ~ 250 (864)
.
T Consensus 103 ~ 103 (598)
T PLN02230 103 T 103 (598)
T ss_pred c
Confidence 3
No 185
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=27.23 E-value=2.1e+02 Score=26.70 Aligned_cols=63 Identities=24% Similarity=0.277 Sum_probs=42.7
Q ss_pred HHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHh
Q psy8382 177 DKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEK 249 (864)
Q Consensus 177 ekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~ 249 (864)
..++.-|+.+-+ ||++...+|.+.+. ..-+++-..++.+.+-+.-... .+.|+.+|..++..+
T Consensus 30 ~~VE~RFd~La~--dG~L~rs~Fg~CIG-------M~dSkeFA~eLFdALaRrr~i~-~~~I~k~eL~efW~q 92 (100)
T PF08414_consen 30 KEVEKRFDKLAK--DGLLPRSDFGECIG-------MKDSKEFAGELFDALARRRGIK-GDSITKDELKEFWEQ 92 (100)
T ss_dssp HHHHHHHHHH-B--TTBEEGGGHHHHHT---------S-HHHHHHHHHHHHHHTT---SSEE-HHHHHHHHHH
T ss_pred HHHHHHHHHhCc--CCcccHHHHHHhcC-------CcccHHHHHHHHHHHHHhcCCc-cCCcCHHHHHHHHHH
Confidence 456666777776 89999999998774 3456777788777777766655 568999998877654
No 186
>PF04876 Tenui_NCP: Tenuivirus major non-capsid protein; InterPro: IPR006960 This entry contains the tenuivirus major non-capsid protein. Proteins accumulate in large amounts in tenuivirus infected cells. They are found in the inclusion bodies that are formed after infection [].
Probab=26.69 E-value=4e+02 Score=26.66 Aligned_cols=69 Identities=19% Similarity=0.257 Sum_probs=49.1
Q ss_pred CCCCCccCHHHHHHHHHHHHH--------hcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhccchHHHHHh
Q psy8382 188 LDGDGLIQHKELQHVMRACME--------ENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHGGLLENLSI 259 (864)
Q Consensus 188 ~dgdG~Is~eELr~vL~~l~~--------~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p~ll~~l~~ 259 (864)
.+.+|.|+...|..+|+..+- .....++.+++.++++.+++.+..++ ++=|+|.....+.|.+..++-+
T Consensus 94 ~~~n~~i~~~~ff~~lQ~~lGdWIT~~~Lkh~n~MSk~Qik~L~~~Ii~~akae~---~dtE~Ye~vwkKmPaY~~nil~ 170 (175)
T PF04876_consen 94 DSTNGLIDIGKFFDILQPKLGDWITKNFLKHPNRMSKDQIKTLCEQIIEMAKAES---SDTEHYEKVWKKMPAYFSNILQ 170 (175)
T ss_pred CCcccceeHHHHHHHHHHHhhhHHHHHHHhccchhhHHHHHHHHHHHHHHHhccC---CchHHHHHHHHHhhHHHHHHHH
Confidence 345777888888877775320 11246899999999999999887654 4457788888888887766543
No 187
>KOG3866|consensus
Probab=26.34 E-value=91 Score=34.57 Aligned_cols=63 Identities=10% Similarity=0.296 Sum_probs=41.9
Q ss_pred HHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhc-CCCChH--------HH---HHHhhhhcCCCCCccCHHHHHHH
Q psy8382 136 QLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFA-GQSPDD--------KI---KFLFRVYDLDGDGLIQHKELQHV 202 (864)
Q Consensus 136 ~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~-~~~~ee--------kL---~~aFk~fD~dgdG~Is~eELr~v 202 (864)
..|.. |.|+||.++-.|+..++..- |..+. ..+.++ .+ .-+.+..|.|.|..||.+||-..
T Consensus 248 TFF~LHD~NsDGfldeqELEaLFtkE------LEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~ 321 (442)
T KOG3866|consen 248 TFFALHDLNSDGFLDEQELEALFTKE------LEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLND 321 (442)
T ss_pred hheeeeccCCcccccHHHHHHHHHHH------HHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhh
Confidence 35666 99999999999988776432 22222 222222 22 22567789999999999998765
Q ss_pred HH
Q psy8382 203 MR 204 (864)
Q Consensus 203 L~ 204 (864)
-.
T Consensus 322 t~ 323 (442)
T KOG3866|consen 322 TD 323 (442)
T ss_pred hh
Confidence 44
No 188
>PLN02222 phosphoinositide phospholipase C 2
Probab=26.28 E-value=1.7e+02 Score=35.66 Aligned_cols=68 Identities=15% Similarity=0.273 Sum_probs=49.2
Q ss_pred CChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHhc-CCCCcceeHHHHHHHHHhc
Q psy8382 174 SPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGM-QFSEEQIDHLTMALFEDAD-SENRGAITYESLKNQLEKH 250 (864)
Q Consensus 174 ~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~-~ls~e~i~~iv~~if~~~D-~d~dG~IsfeEF~~~l~~~ 250 (864)
...+++..+|..|-. ++.++.++|..+|... .|. ..+.+.++++ +.... ..+.+.++++.|...|...
T Consensus 22 ~~~~ei~~if~~~~~--~~~mt~~~l~~FL~~~---Q~~~~~~~~~~~~i----i~~~~~~~~~~~~~~~gF~~yL~s~ 91 (581)
T PLN02222 22 EAPREIKTIFEKYSE--NGVMTVDHLHRFLIDV---QKQDKATREDAQSI----INSASSLLHRNGLHLDAFFKYLFGD 91 (581)
T ss_pred CCcHHHHHHHHHhcC--CCCcCHHHHHHHHHHh---cCCccCCHHHHHHH----HHhhhhhhhccCcCHHHHHHHhcCC
Confidence 355789999999864 4799999999999875 243 3467777774 44322 1235679999999999763
No 189
>PLN02859 glutamine-tRNA ligase
Probab=24.82 E-value=4e+02 Score=33.71 Aligned_cols=54 Identities=15% Similarity=0.287 Sum_probs=43.7
Q ss_pred CCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHh
Q psy8382 172 GQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDA 230 (864)
Q Consensus 172 ~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~ 230 (864)
+-....++..+|+.+-..+...++..+|...+.. |..++.+++++.|..++.+.
T Consensus 82 kIkT~~Ql~AA~kYl~~~~~~~~d~~~Fek~CGV-----GV~VT~EqI~~~V~~~i~~~ 135 (788)
T PLN02859 82 KIKTPAQLEAAFSFFSSTGPESFDLNKFEEACGV-----GVVVSPEDIEAAVNEVFEEN 135 (788)
T ss_pred CCCCHHHHHHHHHHHHhCCCCccCHHHHHHhCCC-----CEEECHHHHHHHHHHHHHhh
Confidence 4456789999999997777778999998887653 88899999999888887654
No 190
>PF10726 DUF2518: Protein of function (DUF2518); InterPro: IPR019664 This entry contains the Ycf51 protein family, which is conserved in Cyanobacteria. The function is not known.
Probab=24.55 E-value=1.2e+02 Score=30.17 Aligned_cols=26 Identities=12% Similarity=0.384 Sum_probs=23.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhc
Q psy8382 374 IYFHKMTGFFIFGYSVLHTIMHLLNF 399 (864)
Q Consensus 374 i~fHk~ig~~i~~~~~lH~iah~~n~ 399 (864)
..+-+|+|+..++++++-.+|++.+|
T Consensus 8 ~~~~~W~~~~ti~~~~lTilaFi~~W 33 (145)
T PF10726_consen 8 LTYTQWLGIATIALAVLTILAFIFKW 33 (145)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 37889999999999999999998876
No 191
>PLN02228 Phosphoinositide phospholipase C
Probab=23.46 E-value=2.2e+02 Score=34.68 Aligned_cols=69 Identities=19% Similarity=0.366 Sum_probs=49.1
Q ss_pred CCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHHHHHhcCC----CCcceeHHHHHHHH
Q psy8382 173 QSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQ-FSEEQIDHLTMALFEDADSE----NRGAITYESLKNQL 247 (864)
Q Consensus 173 ~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~-ls~e~i~~iv~~if~~~D~d----~dG~IsfeEF~~~l 247 (864)
..+.+++..+|..|-. ++.++.++|..+|... .|.. .+.+.+++ ++..+... ..|.++++.|...+
T Consensus 20 ~~~~~ei~~if~~~s~--~~~~t~~~~~~FL~~~---Q~~~~~~~~~~~~----i~~~~~~~~~~~~~~~~~~~gF~~yl 90 (567)
T PLN02228 20 REPPVSIKRLFEAYSR--NGKMSFDELLRFVSEV---QGERHAGLDYVQD----IFHSVKHHNVFHHHGLVHLNAFYRYL 90 (567)
T ss_pred CCCcHHHHHHHHHhcC--CCccCHHHHHHHHHHh---cCCccCCHHHHHH----HHHHhccchhhcccCccCHHHHHHHh
Confidence 3467899999999864 3689999999999875 2332 34455566 55555432 34679999999998
Q ss_pred Hhc
Q psy8382 248 EKH 250 (864)
Q Consensus 248 ~~~ 250 (864)
...
T Consensus 91 ~s~ 93 (567)
T PLN02228 91 FSD 93 (567)
T ss_pred cCc
Confidence 764
No 192
>KOG0042|consensus
Probab=23.15 E-value=1.5e+02 Score=35.64 Aligned_cols=73 Identities=14% Similarity=0.150 Sum_probs=58.2
Q ss_pred cCCCHHHHHHHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHH
Q psy8382 124 SGFDKGNLEWLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHV 202 (864)
Q Consensus 124 l~fs~~eieeL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~v 202 (864)
..+++++.......|.. |.|+.|.+..++..++|... ..+-+++.+...-+-.|.+-+|++..+|+.++
T Consensus 585 i~~~~~~~~~~~~rf~~lD~~k~~~~~i~~v~~vlk~~----------~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~ 654 (680)
T KOG0042|consen 585 IKLTPEDFLRRKTRFAFLDADKKAYQAIADVLKVLKSE----------NVGWDEDRLHEELQEADENLNGFVELREFLQL 654 (680)
T ss_pred cccCHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHh----------cCCCCHHHHHHHHHHHHHhhcceeeHHHHHHH
Confidence 45678888888899999 99999999998866665433 33456678888888888888999999999988
Q ss_pred HHHH
Q psy8382 203 MRAC 206 (864)
Q Consensus 203 L~~l 206 (864)
+..+
T Consensus 655 ~s~~ 658 (680)
T KOG0042|consen 655 MSAI 658 (680)
T ss_pred HHHH
Confidence 8765
No 193
>COG3038 CybB Cytochrome B561 [Energy production and conversion]
Probab=22.89 E-value=2.7e+02 Score=28.78 Aligned_cols=67 Identities=16% Similarity=0.243 Sum_probs=42.1
Q ss_pred hhhhccccccc--chhhHHHHHHHHHHHHhhhhcCCcce----e--eC-------CchhhHHHHHHHHHHHHHHHHHHHH
Q psy8382 331 IFARACGQCLN--FNCMFVLVLMLRHCITFLRTRGFSVF----L--PL-------DQHIYFHKMTGFFIFGYSVLHTIMH 395 (864)
Q Consensus 331 ~iaRg~g~~l~--~n~alillpv~Rn~it~LR~t~l~~~----i--pf-------D~~i~fHk~ig~~i~~~~~lH~iah 395 (864)
.+.+.+|.+.- +=..++.+|++--+++..++.+...+ + ++ |..-..|.++|+++.+++.+|++|-
T Consensus 82 ~~~~~aA~~~Hl~LY~l~lalPlsG~l~~~~~g~~~~~FG~~~~p~~~~~~~~~~~~~~~~H~~la~~~~~lv~lHa~AA 161 (181)
T COG3038 82 PWQRKAAKLGHLALYLLMLALPLSGYLLSTASGRPISVFGLFTVPATLLPNPALADLAKAIHETLAWLLYALIGLHAAAA 161 (181)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceecchhhccCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455554433 33345677888776665554333222 1 22 2234789999999999999999986
Q ss_pred hh
Q psy8382 396 LL 397 (864)
Q Consensus 396 ~~ 397 (864)
+.
T Consensus 162 l~ 163 (181)
T COG3038 162 LK 163 (181)
T ss_pred HH
Confidence 54
No 194
>PRK10263 DNA translocase FtsK; Provisional
Probab=22.47 E-value=1.2e+02 Score=40.07 Aligned_cols=15 Identities=7% Similarity=0.142 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHH
Q psy8382 378 KMTGFFIFGYSVLHT 392 (864)
Q Consensus 378 k~ig~~i~~~~~lH~ 392 (864)
+++|+++++++..+.
T Consensus 115 RliGlLLLLLas~gL 129 (1355)
T PRK10263 115 RIIGVLALILTSCGL 129 (1355)
T ss_pred HHHHHHHHHHHHHHH
Confidence 577777766665443
No 195
>PF07879 PHB_acc_N: PHB/PHA accumulation regulator DNA-binding domain; InterPro: IPR012909 This domain is found at the N terminus of the polyhydroxyalkanoate (PHA) synthesis regulators. These regulators have been shown to directly bind DNA and PHA []. The invariant nature of this domain compared to the C-terminal IPR007897 from INTERPRO domain(s) suggests that it contains the DNA-binding function.
Probab=22.06 E-value=73 Score=27.26 Aligned_cols=22 Identities=23% Similarity=0.578 Sum_probs=20.4
Q ss_pred hhhcCCCCCccCHHHHHHHHHH
Q psy8382 184 RVYDLDGDGLIQHKELQHVMRA 205 (864)
Q Consensus 184 k~fD~dgdG~Is~eELr~vL~~ 205 (864)
++||...+.|||.++++++++.
T Consensus 10 RLYDT~~s~YiTL~di~~lV~~ 31 (64)
T PF07879_consen 10 RLYDTETSSYITLEDIAQLVRE 31 (64)
T ss_pred ccccCCCceeEeHHHHHHHHHC
Confidence 5799999999999999999986
No 196
>COG2976 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.40 E-value=77 Score=33.19 Aligned_cols=35 Identities=17% Similarity=0.051 Sum_probs=25.6
Q ss_pred chhhhhhcccchhhHHHHHHHHHHhhhhhhhhccccc
Q psy8382 291 TLPYIKNNYVYLGFMFFYLLVNIVLFTSRMYVFRKSN 327 (864)
Q Consensus 291 ~~~~~~n~~~~~~~l~l~l~~~i~lf~~~~~~y~~~~ 327 (864)
+++||+.|+ .++++.++++..++|-|++|.-....
T Consensus 14 ik~wwkeNG--k~li~gviLg~~~lfGW~ywq~~q~~ 48 (207)
T COG2976 14 IKDWWKENG--KALIVGVILGLGGLFGWRYWQSHQVE 48 (207)
T ss_pred HHHHHHHCC--chhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 378999998 44555677778899999988754433
No 197
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=20.98 E-value=1.2e+02 Score=27.82 Aligned_cols=63 Identities=13% Similarity=0.277 Sum_probs=40.3
Q ss_pred hhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHH---HHHHHhcCCCCcceeHHHHHHHHHhccchHH
Q psy8382 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTM---ALFEDADSENRGAITYESLKNQLEKHGGLLE 255 (864)
Q Consensus 183 Fk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~---~if~~~D~d~dG~IsfeEF~~~l~~~p~ll~ 255 (864)
|...|.. +...+.+||..++..+ |. . ++++++ ..+++.+.+....++-+|.+++|.++|.+++
T Consensus 26 ~~~idi~-~~~~~~~~l~~~~~~~----~~--~---~~~li~~~~~~~~~l~~~~~~~ls~~e~~~~l~~~p~Lik 91 (105)
T cd02977 26 YEFIDYL-KEPPTKEELKELLAKL----GL--G---VEDLFNTRGTPYRKLGLADKDELSDEEALELMAEHPKLIK 91 (105)
T ss_pred cEEEeec-cCCCCHHHHHHHHHhc----CC--C---HHHHHhcCCchHHHcCCccccCCCHHHHHHHHHhCcCeee
Confidence 4455554 3457889999988764 31 1 222221 2455555543467899999999999998754
No 198
>PRK11513 cytochrome b561; Provisional
Probab=20.45 E-value=3e+02 Score=28.03 Aligned_cols=56 Identities=14% Similarity=0.236 Sum_probs=35.3
Q ss_pred chhhHHHHHHHHHHHHhhhhcCCcce---ee----CC-----chhhHHHHHHHHHHHHHHHHHHHHhh
Q psy8382 342 FNCMFVLVLMLRHCITFLRTRGFSVF---LP----LD-----QHIYFHKMTGFFIFGYSVLHTIMHLL 397 (864)
Q Consensus 342 ~n~alillpv~Rn~it~LR~t~l~~~---ip----fD-----~~i~fHk~ig~~i~~~~~lH~iah~~ 397 (864)
+-..++.+|++--+.+...+.++..+ +| -| ..-..|.++|+++++..++|..|=+.
T Consensus 90 LY~lli~~plsG~~~~~~~G~~~~~fg~~lp~~~~~~~~~~~~~~~~H~~~a~~l~~li~lHvaaAL~ 157 (176)
T PRK11513 90 IYLLFIALPVIGLVMMYNRGNPWFAFGLTMPYASEANFERVDSLKSWHETLANLGYFVIGLHAAAALA 157 (176)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCceeccccCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455777877666555444332221 22 11 12369999999999999999988543
No 199
>KOG4286|consensus
Probab=20.44 E-value=5.1e+02 Score=32.43 Aligned_cols=112 Identities=15% Similarity=0.120 Sum_probs=68.1
Q ss_pred HHHhhhhhcCCCHHHHHHHHHHHhh-h-cCCCCcccHHHHHHHHHhHHHHHHHHHH-hcCC--CChHHHHHHhhhhcCCC
Q psy8382 116 HNLVCLPRSGFDKGNLEWLEQLFRQ-T-VGDEKEICRDDFKKILITKNEFIDAMHQ-FAGQ--SPDDKIKFLFRVYDLDG 190 (864)
Q Consensus 116 el~~l~~~l~fs~~eieeL~~~F~~-D-~d~dG~I~~eEF~~~l~~~~EFl~~l~~-~~~~--~~eekL~~aFk~fD~dg 190 (864)
.+..+++.+.++.-++.-+.++|+. + ..++-.++..+...++...-+|+..... +... ..+--+.++..+||...
T Consensus 404 Klr~LQK~l~ldlv~ltl~l~if~~h~l~~~~e~m~~~~~i~~L~~~y~~l~e~~g~~v~v~l~vD~~lN~llNvyD~~R 483 (966)
T KOG4286|consen 404 KLRRLQKALCLDLLSLSLALDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHGNLVNVPLCVDMCLNWLLNVYDTGR 483 (966)
T ss_pred HHHHHHHHHHhccccHHHHHHHHHHhcccccCcCCCHHHHHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHhcccCC
Confidence 4555666666665566777788877 3 3345566666666655444244333221 1111 12345788999999999
Q ss_pred CCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCC
Q psy8382 191 DGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENR 235 (864)
Q Consensus 191 dG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~d 235 (864)
+|.|..-+|+-.+-.+ ..-..++.+. ++|+.+-.++.
T Consensus 484 ~g~irvls~ki~~i~l----ck~~leek~~----ylF~~vA~~~s 520 (966)
T KOG4286|consen 484 TGRIRVLSFKIGIISL----CKAHLEDKYR----YLFKQVASSTS 520 (966)
T ss_pred CcceEEeeehhhHHHH----hcchhHHHHH----HHHHHHcCchh
Confidence 9999999999877654 2222333344 48988765443
No 200
>KOG4301|consensus
Probab=20.41 E-value=1.5e+02 Score=33.39 Aligned_cols=91 Identities=14% Similarity=0.266 Sum_probs=60.8
Q ss_pred hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhc-----CCC--
Q psy8382 141 TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEEN-----GMQ-- 213 (864)
Q Consensus 141 D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~-----g~~-- 213 (864)
|..+.|+++.--.+. ++..++.+...++++.+|.+.. |.+|.+..-.+.+++...++.. |..
T Consensus 120 ds~~~g~~~vfavki----------alatlc~gk~~dklryIfs~is-ds~gim~~i~~~~fl~evlslpT~v~e~psfg 188 (434)
T KOG4301|consen 120 DSEGQGKQQVFAVKI----------ALATLCGGKIKDKLRYIFSLIS-DSRGIMQEIQRDQFLHEVLSLPTAVFEGPSFG 188 (434)
T ss_pred CccCCCCceeecchh----------hhhhhccchHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHHcCCchhhcCCCcc
Confidence 778888887755332 3445567777899999999875 6788888888888887764311 111
Q ss_pred CCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhcc
Q psy8382 214 FSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHG 251 (864)
Q Consensus 214 ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p 251 (864)
.++.-++. .|- ++.+++++.|+..++.+|
T Consensus 189 ~te~~a~~----cf~-----qqrKv~Ln~fldtl~sdp 217 (434)
T KOG4301|consen 189 YTELSARL----CFL-----QQRKVELNQFLDTLMSDP 217 (434)
T ss_pred hHHHHHHH----HHH-----HHHHHHHHHHHHHHhcCC
Confidence 12222222 333 457899999999988876
No 201
>KOG3449|consensus
Probab=20.38 E-value=3.2e+02 Score=25.91 Aligned_cols=54 Identities=15% Similarity=0.341 Sum_probs=43.0
Q ss_pred HHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHH
Q psy8382 179 IKFLFRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKN 245 (864)
Q Consensus 179 L~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~ 245 (864)
+..+|-+++.-++-..+..+++.+|..+ |....++.++. ++.++. |+ +.+|.+.
T Consensus 3 yvaAYLL~~lgGn~~psa~DikkIl~sV----G~E~d~e~i~~----visel~----GK-~i~ElIA 56 (112)
T KOG3449|consen 3 YVAAYLLAVLGGNASPSASDIKKILESV----GAEIDDERINL----VLSELK----GK-DIEELIA 56 (112)
T ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHh----CcccCHHHHHH----HHHHhc----CC-CHHHHHH
Confidence 4456778888899999999999999987 99999999988 777664 44 6677654
No 202
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=20.15 E-value=6.4e+02 Score=25.12 Aligned_cols=91 Identities=13% Similarity=0.174 Sum_probs=49.9
Q ss_pred HHHHHHhh-hcCCCCcccHHHHHHHHHhHHHHHHHHHHhcCCCChHHHHHHhhhhcCCCCCccCHHHHHHHHHHHHHhcC
Q psy8382 133 WLEQLFRQ-TVGDEKEICRDDFKKILITKNEFIDAMHQFAGQSPDDKIKFLFRVYDLDGDGLIQHKELQHVMRACMEENG 211 (864)
Q Consensus 133 eL~~~F~~-D~d~dG~I~~eEF~~~l~~~~EFl~~l~~~~~~~~eekL~~aFk~fD~dgdG~Is~eELr~vL~~l~~~~g 211 (864)
++...|.. -..+...|+-..|.+++..- ..+...-....+..+|..+-..+...|+.++|..+|..+....+
T Consensus 3 ~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~-------~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA~~~~ 75 (154)
T PF05517_consen 3 AVFKAFASFGKKNGTEMDSKNFAKLCKDC-------GIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELAEKKG 75 (154)
T ss_dssp HHHHHHHCSSTSTSSEEEHHHHHHHHHHT-------SS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhcCCccccccHHHHHHHHHHc-------CCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHHHhh
Confidence 33444433 33445567777776655321 12223345577888999876667778999999999988754444
Q ss_pred CCCCHHHHHHHHHHHHHHhcC
Q psy8382 212 MQFSEEQIDHLTMALFEDADS 232 (864)
Q Consensus 212 ~~ls~e~i~~iv~~if~~~D~ 232 (864)
...+ .+++++..++....+
T Consensus 76 ~~~~--~~~~~~~kl~~~~~P 94 (154)
T PF05517_consen 76 KDKS--SAEELKEKLTAGGGP 94 (154)
T ss_dssp CCCT--HHHHHHHHHHTT--S
T ss_pred cccc--cHHHHHHHHHccCcc
Confidence 3222 444444444444333
No 203
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=20.01 E-value=1e+02 Score=28.69 Aligned_cols=64 Identities=14% Similarity=0.272 Sum_probs=37.9
Q ss_pred hhhhcCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCcceeHHHHHHHHHhccchHH
Q psy8382 183 FRVYDLDGDGLIQHKELQHVMRACMEENGMQFSEEQIDHLTMALFEDADSENRGAITYESLKNQLEKHGGLLE 255 (864)
Q Consensus 183 Fk~fD~dgdG~Is~eELr~vL~~l~~~~g~~ls~e~i~~iv~~if~~~D~d~dG~IsfeEF~~~l~~~p~ll~ 255 (864)
|...|...+ -+|.+||+.++... | + ++-+.. -...+++.+.+....++-+|.+++|.++|.+++
T Consensus 26 ~~~~di~~~-p~s~~eL~~~l~~~----g--~-~~li~~-~~~~yk~l~l~~~~~~s~~e~~~~l~~~p~Lik 89 (105)
T cd03035 26 YTFHDYRKD-GLDAATLERWLAKV----G--W-ETLLNK-RGTTWRKLDDAQKAALDAAKAIALMLEHPSLIK 89 (105)
T ss_pred eEEEecccC-CCCHHHHHHHHHHh----C--h-HHHHcc-CchHHHhCChhhhccCCHHHHHHHHHhCcCeee
Confidence 334444433 48899999888764 4 1 111110 112455555443245788999999999997654
Done!