Query psy8386
Match_columns 73
No_of_seqs 108 out of 433
Neff 5.0
Searched_HMMs 13730
Date Fri Aug 16 17:19:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8386.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/8386hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1rsoa_ a.194.1.1 (A:) Presyna 14.0 19 0.0014 19.3 0.1 12 62-73 30-41 (60)
2 d2jeka1 a.255.1.1 (A:6-145) Hy 6.6 34 0.0024 21.0 -0.8 10 50-59 31-40 (140)
3 d1kyza1 a.4.5.29 (A:13-119) Ca 3.7 1.4E+02 0.0099 16.8 0.6 12 61-72 63-74 (107)
4 d1hc1a2 a.86.1.1 (A:136-398) A 3.3 53 0.0038 21.6 -1.8 21 27-47 83-104 (263)
5 d2a8ea1 d.296.1.1 (A:2-211) Hy 3.3 1.1E+02 0.008 19.6 -0.1 21 17-37 78-98 (210)
6 d1xmxa_ c.52.1.26 (A:) Hypothe 3.0 3.8E+02 0.028 17.9 2.6 16 6-21 99-114 (385)
7 d1qk7a_ g.3.6.2 (A:) Lectin SH 3.0 1.1E+02 0.0083 13.9 -0.3 10 49-58 21-30 (32)
8 d1fp1d1 a.4.5.29 (D:19-128) Ch 2.7 2.5E+02 0.018 15.7 1.0 13 60-72 64-76 (110)
9 d1n7oa3 b.30.5.2 (A:541-814) H 2.6 1.7E+02 0.012 18.6 0.2 14 46-59 246-261 (274)
10 d1gsaa1 c.30.1.3 (A:1-122) Pro 2.5 3E+02 0.022 15.1 1.2 13 16-34 29-41 (122)
No 1
>d1rsoa_ a.194.1.1 (A:) Presynaptic protein sap97 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=14.02 E-value=19 Score=19.30 Aligned_cols=12 Identities=17% Similarity=0.196 Sum_probs=9.7
Q ss_pred hhhhhhhhhhcC
Q psy8386 62 CCERIFRFTIMR 73 (73)
Q Consensus 62 ~~eR~~R~~~sr 73 (73)
.+||+++..+||
T Consensus 30 ~iervI~iFkS~ 41 (60)
T d1rsoa_ 30 SIERVISIFQSN 41 (60)
T ss_dssp HHHHHHHHHHCH
T ss_pred HHHHHHHHHHHH
Confidence 478999888885
No 2
>d2jeka1 a.255.1.1 (A:6-145) Hypothetical protein Rv1873 (MT1922) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=6.62 E-value=34 Score=20.98 Aligned_cols=10 Identities=30% Similarity=1.381 Sum_probs=7.7
Q ss_pred eeeheehhhh
Q psy8386 50 FWKWVILPGI 59 (73)
Q Consensus 50 ~w~~~~~P~~ 59 (73)
-|||++.|=+
T Consensus 31 HWMWfIFPQl 40 (140)
T d2jeka1 31 HWMWFVFPQL 40 (140)
T ss_dssp SCHHHHSCCB
T ss_pred ceeeehhHhh
Confidence 4999998843
No 3
>d1kyza1 a.4.5.29 (A:13-119) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=3.69 E-value=1.4e+02 Score=16.76 Aligned_cols=12 Identities=17% Similarity=0.337 Sum_probs=8.8
Q ss_pred hhhhhhhhhhhc
Q psy8386 61 YCCERIFRFTIM 72 (73)
Q Consensus 61 y~~eR~~R~~~s 72 (73)
=.+||++|..-|
T Consensus 63 ~~L~RilR~Las 74 (107)
T d1kyza1 63 VMLDRMLRLLAC 74 (107)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 358999997654
No 4
>d1hc1a2 a.86.1.1 (A:136-398) Arthropod hemocyanin {Spiny lobster (Panulirus interruptus) [TaxId: 6735]}
Probab=3.31 E-value=53 Score=21.55 Aligned_cols=21 Identities=24% Similarity=0.510 Sum_probs=14.5
Q ss_pred eeEeeehh-hHHHHHHHHHHhc
Q psy8386 27 TVFYWTHL-LYVPFWILLILHC 47 (73)
Q Consensus 27 ~~Fw~tHh-L~i~f~~ll~~Hg 47 (73)
|+|||.|+ |..=+++=-.-+|
T Consensus 83 Elfyy~hqQlLARY~lERLsng 104 (263)
T d1hc1a2 83 ELFFWVHHQLTARFDFERLSNW 104 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT
T ss_pred chHHHHHHHHHHHHHHHHHhCC
Confidence 49999998 5444665556666
No 5
>d2a8ea1 d.296.1.1 (A:2-211) Hypothetical protein YktB {Bacillus subtilis [TaxId: 1423]}
Probab=3.31 E-value=1.1e+02 Score=19.59 Aligned_cols=21 Identities=19% Similarity=0.534 Sum_probs=16.2
Q ss_pred hhcCCcCccceeEeeehhhHH
Q psy8386 17 TRGFNHKAKKTVFYWTHLLYV 37 (73)
Q Consensus 17 r~~f~~~~~f~~Fw~tHhL~i 37 (73)
++||+-..|||+.-|.-|+|+
T Consensus 78 KRGYK~lPHFqiGlw~dhlFi 98 (210)
T d2a8ea1 78 KRGYKKLPHFQIGLWESHVFV 98 (210)
T ss_dssp SSCSTTSCEEEEEECSSEEEE
T ss_pred CCccccCCceEEeeccceEEE
Confidence 357887899999877777765
No 6
>d1xmxa_ c.52.1.26 (A:) Hypothetical protein VC1899 {Vibrio cholerae [TaxId: 666]}
Probab=3.04 E-value=3.8e+02 Score=17.93 Aligned_cols=16 Identities=13% Similarity=0.117 Sum_probs=13.4
Q ss_pred HHHHhhhhhhhhhcCC
Q psy8386 6 LMLRHCITFLRTRGFN 21 (73)
Q Consensus 6 lm~~~s~~~iRr~~f~ 21 (73)
+|.+.|.+.+|..+++
T Consensus 99 ~Msl~ay~~~r~~~~~ 114 (385)
T d1xmxa_ 99 HRLLSAYEVFRSYHWP 114 (385)
T ss_dssp HHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhcCCc
Confidence 6888889999998776
No 7
>d1qk7a_ g.3.6.2 (A:) Lectin SHL-I {Chinese bird spider (Selenocosmia huwena) [TaxId: 29017]}
Probab=2.97 E-value=1.1e+02 Score=13.91 Aligned_cols=10 Identities=50% Similarity=1.454 Sum_probs=7.3
Q ss_pred ceeeheehhh
Q psy8386 49 NFWKWVILPG 58 (73)
Q Consensus 49 ~~w~~~~~P~ 58 (73)
.+|+|-+.|+
T Consensus 21 ~twkwcv~~g 30 (32)
T d1qk7a_ 21 RTWKWCVLAG 30 (32)
T ss_dssp SSSCBEEECC
T ss_pred CceeeeeccC
Confidence 5788877664
No 8
>d1fp1d1 a.4.5.29 (D:19-128) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=2.66 E-value=2.5e+02 Score=15.69 Aligned_cols=13 Identities=15% Similarity=0.192 Sum_probs=9.7
Q ss_pred hhhhhhhhhhhhc
Q psy8386 60 IYCCERIFRFTIM 72 (73)
Q Consensus 60 ly~~eR~~R~~~s 72 (73)
.-.+||++|..-|
T Consensus 64 ~~~L~RiLRlLas 76 (110)
T d1fp1d1 64 PNRLDRMLRLLAS 76 (110)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4568999997754
No 9
>d1n7oa3 b.30.5.2 (A:541-814) Hyaluronate lyase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=2.60 E-value=1.7e+02 Score=18.60 Aligned_cols=14 Identities=21% Similarity=0.700 Sum_probs=10.0
Q ss_pred hccc--eeeheehhhh
Q psy8386 46 HCPN--FWKWVILPGI 59 (73)
Q Consensus 46 Hg~~--~w~~~~~P~~ 59 (73)
|||+ .+-|+++|..
T Consensus 246 Hgp~~asY~Y~vlP~~ 261 (274)
T d1n7oa3 246 HKQNGDSYGYMLIPNV 261 (274)
T ss_dssp CCSTTEEEEEEEEESC
T ss_pred cCCCCCCEEEEEeCCC
Confidence 4553 6889998864
No 10
>d1gsaa1 c.30.1.3 (A:1-122) Prokaryotic glutathione synthetase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=2.46 E-value=3e+02 Score=15.14 Aligned_cols=13 Identities=23% Similarity=0.547 Sum_probs=8.9
Q ss_pred hhhcCCcCccceeEeeehh
Q psy8386 16 RTRGFNHKAKKTVFYWTHL 34 (73)
Q Consensus 16 Rr~~f~~~~~f~~Fw~tHh 34 (73)
-++|+| +|+++.+
T Consensus 29 q~Rg~~------v~~~~~~ 41 (122)
T d1gsaa1 29 QRRGYE------LHYMEMG 41 (122)
T ss_dssp HHTTCE------EEEECGG
T ss_pred HHCCCe------EEEEecC
Confidence 345677 9888765
Done!