RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy8386
         (73 letters)



>d1dhsa_ c.31.1.1 (A:) Deoxyhypusine synthase, DHS {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 361

 Score = 23.7 bits (51), Expect = 2.3
 Identities = 7/62 (11%), Positives = 18/62 (29%), Gaps = 6/62 (9%)

Query: 10  HCITFLRTRGFNHKAKKTVFYWTHLLYVPFWILLILHCPNFWKWVILPGIIYCCERIFRF 69
                +   G      ++V+YW    ++P      +  P      +   I +   +    
Sbjct: 194 TPSKMIARLGKEINNPESVYYWAQKNHIP------VFSPALTDGSLGDMIFFHSYKNPGL 247

Query: 70  TI 71
            +
Sbjct: 248 VL 249


>d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 344

 Score = 23.7 bits (50), Expect = 2.8
 Identities = 7/26 (26%), Positives = 13/26 (50%)

Query: 46  HCPNFWKWVILPGIIYCCERIFRFTI 71
           + P F   ++ PG  Y     F+F++
Sbjct: 318 NQPRFPPVLLRPGEEYDHTTWFKFSV 343


>d1lura_ b.30.5.4 (A:) Aldose 1-epimerase homologue {Nematode
           (Caenorhabditis elegans) [TaxId: 6239]}
          Length = 329

 Score = 22.5 bits (47), Expect = 7.4
 Identities = 7/27 (25%), Positives = 14/27 (51%)

Query: 46  HCPNFWKWVILPGIIYCCERIFRFTIM 72
           +  +F    + PG  YC E ++ F+ +
Sbjct: 302 NFDHFPDVSLRPGDHYCQEIVYTFSHV 328


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.344    0.153    0.592 

Gapped
Lambda     K      H
   0.267   0.0593    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 327,326
Number of extensions: 12369
Number of successful extensions: 90
Number of sequences better than 10.0: 1
Number of HSP's gapped: 90
Number of HSP's successfully gapped: 10
Length of query: 73
Length of database: 2,407,596
Length adjustment: 41
Effective length of query: 32
Effective length of database: 1,844,666
Effective search space: 59029312
Effective search space used: 59029312
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.6 bits)
S2: 47 (22.2 bits)