Query psy8387
Match_columns 176
No_of_seqs 157 out of 1151
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 17:20:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8387.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8387hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kxq_A E3 ubiquitin-protein li 99.9 2.9E-26 9.8E-31 165.6 10.5 85 75-159 5-89 (90)
2 1tk7_A CG4244-PB; WW domain, n 99.9 5.9E-25 2E-29 158.0 10.0 81 75-157 8-88 (88)
3 3kys_B YAP65, 65 kDa YES-assoc 99.8 2.6E-21 8.8E-26 145.4 1.6 78 8-85 8-91 (125)
4 1o6w_A PRP40, PRE-mRNA process 99.8 7.5E-21 2.6E-25 132.3 2.4 73 82-159 2-74 (75)
5 2l5f_A PRE-mRNA-processing fac 99.8 1.6E-19 5.3E-24 130.7 5.9 77 76-157 8-84 (92)
6 2jxw_A WW domain-binding prote 99.7 1.6E-17 5.6E-22 115.7 8.8 70 82-156 5-74 (75)
7 2dwv_A Salvador homolog 1 prot 99.7 5E-17 1.7E-21 105.2 5.4 46 102-158 1-46 (49)
8 3l4h_A E3 ubiquitin-protein li 99.6 7.7E-18 2.6E-22 125.4 -0.9 61 80-159 46-106 (109)
9 2law_A Yorkie homolog; YAP, SM 99.6 8.7E-16 3E-20 94.2 4.6 35 123-157 4-38 (38)
10 2ysg_A Syntaxin-binding protei 99.6 1.7E-15 5.8E-20 93.9 5.0 36 123-158 5-40 (40)
11 2djy_A SMAD ubiquitination reg 99.6 1.7E-15 5.8E-20 95.0 4.8 37 123-159 5-41 (42)
12 2ysf_A E3 ubiquitin-protein li 99.6 2.7E-15 9.4E-20 93.0 5.0 36 123-158 5-40 (40)
13 1wr3_A Ubiquitin-protein ligas 99.5 4.9E-15 1.7E-19 89.5 4.8 34 124-157 3-36 (36)
14 2l4j_A YES-associated protein 99.5 7.1E-15 2.4E-19 93.8 5.4 36 123-158 9-44 (46)
15 2ez5_W Dnedd4, E3 ubiquitin-pr 99.5 7.5E-15 2.6E-19 93.6 5.2 37 123-159 8-44 (46)
16 2kyk_A E3 ubiquitin-protein li 99.5 8.2E-15 2.8E-19 90.1 5.0 36 123-158 4-39 (39)
17 1wr7_A NEDD4-2; all-beta, liga 99.5 6.2E-15 2.1E-19 91.7 4.2 35 123-157 6-40 (41)
18 1wr4_A Ubiquitin-protein ligas 99.5 1.2E-14 4.2E-19 87.5 5.1 34 124-157 3-36 (36)
19 2zaj_A Membrane-associated gua 99.5 1.1E-14 3.6E-19 94.2 4.9 36 123-158 11-46 (49)
20 2jmf_A E3 ubiquitin-protein li 99.5 1.1E-14 3.9E-19 95.5 5.1 37 122-158 15-51 (53)
21 2kpz_A E3 ubiquitin-protein li 99.5 1.3E-14 4.5E-19 93.6 5.0 38 123-160 10-47 (49)
22 1i5h_W Rnedd4, ubiquitin ligas 99.5 1.4E-14 4.9E-19 93.9 5.1 38 122-159 8-45 (50)
23 2ysb_A Salvador homolog 1 prot 99.5 1.4E-14 4.9E-19 93.6 4.9 37 123-159 9-45 (49)
24 1e0m_A Wwprototype; SH3 protot 99.5 3.3E-14 1.1E-18 86.2 5.1 35 124-158 2-36 (37)
25 1wmv_A WWOX, WW domain contain 99.5 1E-14 3.5E-19 96.1 3.0 39 123-161 9-47 (54)
26 2ysd_A Membrane-associated gua 99.5 3.2E-14 1.1E-18 94.7 5.1 39 122-160 11-49 (57)
27 2yse_A Membrane-associated gua 99.5 1.5E-14 5.2E-19 97.2 3.0 39 123-161 11-49 (60)
28 2dmv_A Itchy homolog E3 ubiqui 99.5 3.9E-14 1.3E-18 88.9 4.7 36 123-158 5-40 (43)
29 2ysh_A GAS-7, growth-arrest-sp 99.4 2.3E-13 7.8E-18 83.9 4.9 35 123-157 5-39 (40)
30 2ho2_A Fe65 protein, amyloid b 99.4 4.4E-13 1.5E-17 82.3 5.0 34 124-158 2-35 (38)
31 1ymz_A CC45; artificial protei 99.4 6E-13 2E-17 83.3 5.1 35 124-158 7-41 (43)
32 1jmq_A YAP65, 65 kDa YES-assoc 99.4 2.3E-13 7.8E-18 86.4 3.0 36 123-158 6-41 (46)
33 2ysc_A Amyloid beta A4 precurs 99.3 2.2E-12 7.4E-17 79.6 4.2 33 123-156 6-38 (39)
34 2ysf_A E3 ubiquitin-protein li 99.2 7.9E-12 2.7E-16 77.2 5.2 37 75-111 3-39 (40)
35 2ysd_A Membrane-associated gua 99.2 1.4E-11 4.8E-16 81.8 6.4 47 76-129 11-57 (57)
36 2ez5_W Dnedd4, E3 ubiquitin-pr 99.2 1.2E-11 4E-16 78.7 5.6 38 75-112 6-43 (46)
37 2ysg_A Syntaxin-binding protei 99.2 1.1E-11 3.7E-16 76.6 5.1 36 76-111 4-39 (40)
38 2law_A Yorkie homolog; YAP, SM 99.2 5.5E-12 1.9E-16 77.1 3.7 36 76-111 3-38 (38)
39 2jmf_A E3 ubiquitin-protein li 99.2 1.6E-11 5.6E-16 80.4 5.4 40 73-112 12-51 (53)
40 2jv4_A Peptidyl-prolyl CIS/tra 99.2 1.4E-11 4.7E-16 81.0 4.8 35 124-158 6-41 (54)
41 1tk7_A CG4244-PB; WW domain, n 99.2 1.1E-11 3.6E-16 88.6 4.2 37 123-159 10-46 (88)
42 2djy_A SMAD ubiquitination reg 99.2 2.1E-11 7.1E-16 76.2 5.0 36 77-112 5-40 (42)
43 2l4j_A YES-associated protein 99.2 2.9E-11 1E-15 76.9 5.3 38 75-112 7-44 (46)
44 2ysb_A Salvador homolog 1 prot 99.2 3.3E-11 1.1E-15 77.7 5.5 38 76-113 8-45 (49)
45 2kxq_A E3 ubiquitin-protein li 99.2 2.2E-11 7.4E-16 87.4 4.9 36 124-159 8-43 (90)
46 1wr7_A NEDD4-2; all-beta, liga 99.2 2.1E-11 7.1E-16 75.6 4.0 36 76-111 5-40 (41)
47 1wr3_A Ubiquitin-protein ligas 99.2 3.4E-11 1.2E-15 72.5 4.4 33 78-110 3-35 (36)
48 2dmv_A Itchy homolog E3 ubiqui 99.1 4.4E-11 1.5E-15 74.9 4.9 38 75-112 3-40 (43)
49 2zaj_A Membrane-associated gua 99.1 3.9E-11 1.3E-15 77.4 4.7 40 73-112 7-46 (49)
50 1wr4_A Ubiquitin-protein ligas 99.1 4.4E-11 1.5E-15 71.7 4.6 34 77-110 2-35 (36)
51 2kyk_A E3 ubiquitin-protein li 99.1 5E-11 1.7E-15 73.0 4.9 35 77-111 4-38 (39)
52 2e45_A Fe65 protein, amyloid b 99.1 3.6E-11 1.2E-15 79.0 4.4 36 122-158 16-51 (55)
53 1i5h_W Rnedd4, ubiquitin ligas 99.1 7.8E-11 2.7E-15 76.2 5.4 38 75-112 7-44 (50)
54 2kpz_A E3 ubiquitin-protein li 99.1 5.7E-11 1.9E-15 76.4 4.5 37 76-112 9-45 (49)
55 1e0m_A Wwprototype; SH3 protot 99.1 9.7E-11 3.3E-15 70.6 4.8 34 78-111 2-35 (37)
56 2ysh_A GAS-7, growth-arrest-sp 99.1 1.5E-10 5.2E-15 71.1 5.3 37 75-111 3-39 (40)
57 1wmv_A WWOX, WW domain contain 99.1 1.5E-10 5E-15 76.1 5.1 38 77-114 9-46 (54)
58 1eg3_A Dystrophin; EF-hand lik 99.1 5.3E-11 1.8E-15 100.5 3.7 37 124-160 10-46 (261)
59 2dwv_A Salvador homolog 1 prot 99.0 1.5E-10 5E-15 74.6 4.2 36 77-112 11-46 (49)
60 2yse_A Membrane-associated gua 99.0 1.2E-10 4.1E-15 78.1 3.5 40 73-112 7-46 (60)
61 1ymz_A CC45; artificial protei 99.0 2.7E-10 9.1E-15 71.1 4.9 37 76-112 5-41 (43)
62 3tc5_A Peptidyl-prolyl CIS-tra 99.0 2.8E-10 9.5E-15 90.0 4.4 37 122-158 6-43 (166)
63 3olm_A E3 ubiquitin-protein li 99.0 1.3E-10 4.6E-15 103.9 2.9 39 122-160 5-43 (429)
64 1jmq_A YAP65, 65 kDa YES-assoc 98.9 4.4E-10 1.5E-14 71.0 3.2 39 74-112 3-41 (46)
65 2ho2_A Fe65 protein, amyloid b 98.9 9.8E-10 3.4E-14 67.2 4.4 34 78-112 2-35 (38)
66 2jx8_A Hpcif1, phosphorylated 98.9 4.6E-10 1.6E-14 73.2 2.3 34 125-158 10-44 (52)
67 2ysc_A Amyloid beta A4 precurs 98.9 1.5E-09 5E-14 66.8 4.2 34 76-110 5-38 (39)
68 3l4h_A E3 ubiquitin-protein li 98.9 2.3E-09 7.9E-14 79.7 5.1 38 76-113 69-106 (109)
69 2jv4_A Peptidyl-prolyl CIS/tra 98.8 3.2E-09 1.1E-13 69.6 4.8 36 77-112 5-41 (54)
70 2l5f_A PRE-mRNA-processing fac 98.8 4.2E-09 1.4E-13 75.7 4.3 36 123-158 9-44 (92)
71 2ysi_A Transcription elongatio 98.7 1.1E-08 3.8E-13 63.1 4.8 33 124-156 6-38 (40)
72 2e45_A Fe65 protein, amyloid b 98.7 1.3E-08 4.6E-13 66.7 4.0 38 73-111 13-50 (55)
73 1ywi_A Formin-binding protein 98.7 1.7E-08 5.7E-13 62.6 3.8 33 124-156 8-40 (41)
74 1e0l_A Formin binding protein; 98.6 5.5E-08 1.9E-12 58.9 4.8 32 126-157 4-35 (37)
75 1o6w_A PRP40, PRE-mRNA process 98.6 3.6E-08 1.2E-12 67.8 3.7 31 128-158 2-32 (75)
76 3tc5_A Peptidyl-prolyl CIS-tra 98.5 9.7E-08 3.3E-12 75.3 3.9 37 76-112 6-43 (166)
77 1eg3_A Dystrophin; EF-hand lik 98.4 7E-08 2.4E-12 81.4 2.9 34 78-111 10-43 (261)
78 2jx8_A Hpcif1, phosphorylated 98.4 5.7E-08 1.9E-12 63.2 1.4 35 78-112 9-44 (52)
79 1e0n_A Hypothetical protein; Y 98.4 2.5E-07 8.4E-12 52.5 3.8 27 128-155 1-27 (27)
80 2ysi_A Transcription elongatio 98.4 5.4E-07 1.9E-11 55.4 5.1 34 78-111 6-39 (40)
81 3olm_A E3 ubiquitin-protein li 98.4 1.5E-07 5.3E-12 84.0 3.4 38 76-113 5-42 (429)
82 2jxw_A WW domain-binding prote 98.4 3.9E-07 1.3E-11 62.8 4.7 31 127-157 4-34 (75)
83 1ywi_A Formin-binding protein 98.3 4.6E-07 1.6E-11 56.0 3.2 34 77-110 7-40 (41)
84 1e0l_A Formin binding protein; 98.3 1.1E-06 3.7E-11 53.1 4.7 33 79-111 3-35 (37)
85 1e0n_A Hypothetical protein; Y 98.0 5.7E-06 1.9E-10 46.8 3.1 27 82-109 1-27 (27)
86 2dk7_A Transcription elongatio 97.8 2.1E-05 7.2E-10 54.3 3.8 30 129-158 21-50 (73)
87 2dk1_A WW domain-binding prote 97.7 1.9E-05 6.4E-10 50.8 2.4 29 129-157 8-36 (50)
88 2dk7_A Transcription elongatio 97.4 9.2E-05 3.2E-09 51.1 3.5 32 83-114 21-52 (73)
89 2dk1_A WW domain-binding prote 97.2 0.00021 7.1E-09 45.9 2.9 31 82-112 7-37 (50)
90 1yw5_A Peptidyl prolyl CIS/tra 96.8 0.0015 5E-08 51.3 5.0 37 75-111 3-40 (177)
91 3le4_A Microprocessor complex 95.8 0.015 5.3E-07 40.1 4.9 37 121-157 24-60 (79)
92 3le4_A Microprocessor complex 94.0 0.085 2.9E-06 36.3 4.7 39 73-111 22-60 (79)
93 2ky8_A Methyl-CPG-binding doma 74.3 2.7 9.4E-05 28.3 3.2 27 124-151 11-45 (72)
94 1d9n_A Methyl-CPG-binding prot 71.9 4.4 0.00015 27.5 3.8 35 124-159 9-51 (75)
95 3c2i_A Methyl-CPG-binding prot 68.6 4.4 0.00015 29.0 3.4 38 123-161 21-66 (97)
96 1yw5_A Peptidyl prolyl CIS/tra 66.4 3.8 0.00013 31.5 2.9 22 136-157 19-40 (177)
97 3vxv_A Methyl-CPG-binding doma 65.9 4.9 0.00017 26.8 3.0 23 124-146 4-34 (69)
98 1ub1_A MECP2, attachment regio 55.2 8.4 0.00029 29.0 2.9 34 123-157 35-76 (133)
99 1ub1_A MECP2, attachment regio 46.8 44 0.0015 25.0 5.7 29 73-101 31-67 (133)
100 2be1_A Serine/threonine-protei 23.5 1.2E+02 0.004 25.6 5.3 62 89-152 17-81 (339)
101 3q7m_A Lipoprotein YFGL, BAMB; 22.1 1.2E+02 0.0042 24.0 5.0 23 133-155 323-345 (376)
102 3q7m_A Lipoprotein YFGL, BAMB; 21.1 1E+02 0.0035 24.5 4.3 61 90-156 111-171 (376)
No 1
>2kxq_A E3 ubiquitin-protein ligase smurf2; WW, smurf2, TGF-beta, modular binding, protein BIN; NMR {Homo sapiens} PDB: 2lb0_A* 2laz_A*
Probab=99.93 E-value=2.9e-26 Score=165.55 Aligned_cols=85 Identities=72% Similarity=1.282 Sum_probs=73.2
Q ss_pred CCCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCCCcCCccchhccCCCCCCceEEEcCCCceEEeeCCCCeeeccC
Q psy8387 75 QQPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIPKELRPEQATELGNLPPGWEVRQTASGRYYYVDHNNRTTQFTD 154 (176)
Q Consensus 75 ~s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~~~~~~~~~~~~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWed 154 (176)
.+..+||+||+++++.+|++|||||.|++++|++|+....+.........+||.|||+++|.+|++|||||+|++|+|+|
T Consensus 5 ~~~~~LP~gWe~~~~~~Gr~YY~n~~t~~t~W~~P~~~~~~~~~~~~~~~~LP~gWe~~~~~~G~~Yy~n~~t~~t~w~~ 84 (90)
T 2kxq_A 5 GSPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTD 84 (90)
T ss_dssp SSCCSCCSSCEEEEETTTEEEEEETTTTEEESSCSSSCSSSCSCCGGGTCCCCSSCCEEECTTSCEEEEETTTTEEESSC
T ss_pred CCCCCCCCCcEEEECCCCCEEEEECCCCeEeeecccccccccccCcccccccCCCceEEECCCCCEEEEECCCCcEecCC
Confidence 44567999999999999999999999999999999976543322223456899999999999999999999999999999
Q ss_pred CCCcH
Q psy8387 155 PRLTP 159 (176)
Q Consensus 155 Prl~~ 159 (176)
||+.+
T Consensus 85 Pr~~~ 89 (90)
T 2kxq_A 85 PRLSA 89 (90)
T ss_dssp TTTSC
T ss_pred CCcCC
Confidence 99863
No 2
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=99.92 E-value=5.9e-25 Score=158.04 Aligned_cols=81 Identities=40% Similarity=0.778 Sum_probs=69.9
Q ss_pred CCCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCCCcCCccchhccCCCCCCceEEEcCCCceEEeeCCCCeeeccC
Q psy8387 75 QQPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIPKELRPEQATELGNLPPGWEVRQTASGRYYYVDHNNRTTQFTD 154 (176)
Q Consensus 75 ~s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~~~~~~~~~~~~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWed 154 (176)
....+||+||+++++.+|++||+||.|++++|++|+..... .......+||+|||+++|++|++|||||+|++|+|+|
T Consensus 8 ~~~~~LP~gWe~~~~~~Gr~Yy~n~~t~~t~W~~P~~~~~~--~~~~~~~~LP~gWe~~~~~~G~~Yy~nh~t~~ttw~~ 85 (88)
T 1tk7_A 8 DALGPLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQGQE--VSLINEGPLPPGWEIRYTAAGERFFVDHNTRRTTFED 85 (88)
T ss_dssp STTSSSSSSCCEEEETTTEEEEEETTTTEEEEESCCCTTTC--CHHHHSCSSCSSCEEEEETTTEEEEEETTTTEEESSS
T ss_pred CccCCCCCCcEEEECCCCCEEEEECCCCCeEeecccccccc--cccccccccCCceEEEECCCCCEEEEECCCCcEeCCC
Confidence 34567999999999999999999999999999999865421 1123456899999999999999999999999999999
Q ss_pred CCC
Q psy8387 155 PRL 157 (176)
Q Consensus 155 Prl 157 (176)
||+
T Consensus 86 Prl 88 (88)
T 1tk7_A 86 PRP 88 (88)
T ss_dssp SCC
T ss_pred CCC
Confidence 996
No 3
>3kys_B YAP65, 65 kDa YES-associated protein; immunoglobulin-like fold, activator, disease mutation, DNA- binding, nucleus, phosphoprotein, transcription; 2.80A {Homo sapiens} PDB: 3jua_B
Probab=99.81 E-value=2.6e-21 Score=145.41 Aligned_cols=78 Identities=12% Similarity=0.128 Sum_probs=38.6
Q ss_pred EEEeecCCCCChHHHhhhcccCCCCCCCCcccCcccCC-----CCCCCCcceeccccCCCC-CCcccCCCCCCCCCCCCC
Q psy8387 8 VLLYHSGNYNNSNLILNNSHVNNNNTSSPALPLRSRTE-----DQQHNHRLLVQQPRKRGA-SKKCSGGNSLLQQPPDLP 81 (176)
Q Consensus 8 ~~~~~~~~~~~~~~lf~~v~~p~~~~~~~~~p~r~~~~-----~~~~~~~~sr~~~~~~~~-~~~~~~~~ra~~s~~~LP 81 (176)
|+..-.|++-|||||||+||||+++++|++||||+||| ++|+.++||||+|+|+|. |.++++|+|++++++.|+
T Consensus 8 ivhvr~Ds~t~LeaLFn~vmnP~~a~~P~svPmrlRkLP~SFFkpP~p~SHSRq~StDsg~~g~l~~~H~RAhSSPASLq 87 (125)
T 3kys_B 8 IVHVRGDSETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPPEPKSHSRQASTDAGTAGALTPQHVRAHSSPASLQ 87 (125)
T ss_dssp EEEECTTHHHHHHHHHHHHHSGGGCCCCCCCCGGGSSCCGGGTSCCC---------------------------------
T ss_pred eEEecccchHHHHHHHHHhhCCcccCCCCccccccccCcHhhcCCCCCCCcccccccccCcCCCCCcccccccCCccccc
Confidence 45556789999999999999999999999999999999 999999999999999987 788999999999999999
Q ss_pred CCcE
Q psy8387 82 HGYE 85 (176)
Q Consensus 82 ~gWe 85 (176)
.|..
T Consensus 88 ~~~~ 91 (125)
T 3kys_B 88 LGAV 91 (125)
T ss_dssp ----
T ss_pred cccc
Confidence 8865
No 4
>1o6w_A PRP40, PRE-mRNA processing protein PRP40; WW domain PAIR, nuclear protein, mRNA splicing, ribonucleoprotein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1 b.72.1.1
Probab=99.80 E-value=7.5e-21 Score=132.27 Aligned_cols=73 Identities=29% Similarity=0.529 Sum_probs=62.8
Q ss_pred CCcEEEECCCCceEeecCCCCeeeccCCCCCCcCCccchhccCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCcH
Q psy8387 82 HGYEIRTTQQGQVYFYHLPTGVSTWHDPRIPKELRPEQATELGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLTP 159 (176)
Q Consensus 82 ~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~~~~~~~~~~~~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~~ 159 (176)
+||+++.+.+|++||+|+.|++++|++|...... .....||.||+++.|++|++|||||.|++|+|++|++..
T Consensus 2 ~~W~~~~~~~Gr~YY~n~~T~~s~W~~P~~~~~~-----~~~~~lp~gW~~~~~~~Gr~Yy~n~~t~~t~W~~P~~~~ 74 (75)
T 1o6w_A 2 SIWKEAKDASGRIYYYNTLTKKSTWEKPKELISQ-----EELLLRENGWKAAKTADGKVYYYNPTTRETSWTIPAFEK 74 (75)
T ss_dssp CCEEEEECTTCCEEEEETTTTEEESSCCHHHHHH-----HHHHHHHHTCEEEECTTCCEEEEETTTTEEESSCCCCCC
T ss_pred CCCeEEECCCCCeEEEECCCCCEEeecchhhccc-----ccccCCCCeEEEEECCCCCEEEEECCCCCEECCCCCCCC
Confidence 4799999999999999999999999999743211 112348999999999999999999999999999999853
No 5
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=99.78 E-value=1.6e-19 Score=130.73 Aligned_cols=77 Identities=21% Similarity=0.420 Sum_probs=65.9
Q ss_pred CCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCCCcCCccchhccCCCCCCceEEEcCCCceEEeeCCCCeeeccCC
Q psy8387 76 QPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIPKELRPEQATELGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDP 155 (176)
Q Consensus 76 s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~~~~~~~~~~~~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedP 155 (176)
...+||.+|+++.+.+|++||+|+.|++++|++|...... .+...||.||+++.+.+|++||+|+.|++|+|++|
T Consensus 8 ~~~~lp~~W~e~~~~~Gr~YYyN~~T~~s~We~P~~~~~~-----~e~~~~~~~W~~~~~~~Gr~Yy~N~~T~~s~We~P 82 (92)
T 2l5f_A 8 TASGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTP-----AEQLLSKCPWKEYKSDSGKTYYYNSQTKESRWAKP 82 (92)
T ss_dssp STTBTTTTEEEEECTTSCEEEEETTTTEEESSCSGGGTCH-----HHHHHHSCSEEEEECTTCCEEEEETTTTEEESCCC
T ss_pred cCCCCCCCcEEEEcCCCCEEEEECCCCceecccCcccccc-----ccccccccceEEEECCCCCEEEEECCCCCeeccCc
Confidence 3456999999999999999999999999999999754321 11124789999999999999999999999999999
Q ss_pred CC
Q psy8387 156 RL 157 (176)
Q Consensus 156 rl 157 (176)
+.
T Consensus 83 ~~ 84 (92)
T 2l5f_A 83 KE 84 (92)
T ss_dssp HH
T ss_pred hh
Confidence 75
No 6
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=99.72 E-value=1.6e-17 Score=115.73 Aligned_cols=70 Identities=20% Similarity=0.401 Sum_probs=61.8
Q ss_pred CCcEEEECCCCceEeecCCCCeeeccCCCCCCcCCccchhccCCCCCCceEEEcCCCceEEeeCCCCeeeccCCC
Q psy8387 82 HGYEIRTTQQGQVYFYHLPTGVSTWHDPRIPKELRPEQATELGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPR 156 (176)
Q Consensus 82 ~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~~~~~~~~~~~~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPr 156 (176)
.+|+++.+++|++||+|+.|++++|++|...... ....++|.+|++..+++|++||+|+.|++|+|++|+
T Consensus 5 ~~W~e~~~~~G~~YYyN~~T~~s~We~P~~~~~~-----~e~~~~~~~W~~~~~~~Gr~YyyN~~T~~s~We~P~ 74 (75)
T 2jxw_A 5 GRWVEGITSEGYHYYYDLISGASQWEKPEGFQGD-----LKKTAVKTVWVEGLSEDGFTYYYNTETGESRWEKPD 74 (75)
T ss_dssp CCEEEEEETTTEEEEEETTTTEEECSCCSSCSSC-----CSSSSCCCSEEEEEETTTEEEEEETTTTEEESSCCC
T ss_pred CCcEEEECCCCCEEEEECCCCCEeecCCCccccc-----ccccCCCccEEEEECCCCCEEEEECcCCCEeccCcC
Confidence 6899999999999999999999999999864321 123468999999999999999999999999999996
No 7
>2dwv_A Salvador homolog 1 protein; WW domain, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.67 E-value=5e-17 Score=105.19 Aligned_cols=46 Identities=37% Similarity=0.645 Sum_probs=41.7
Q ss_pred CeeeccCCCCCCcCCccchhccCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCc
Q psy8387 102 GVSTWHDPRIPKELRPEQATELGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLT 158 (176)
Q Consensus 102 rtTsW~~P~~~~~~~~~~~~~~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~ 158 (176)
++|+|+||+.. .+||+|||+++|.+|++|||||+|++|+|+||++.
T Consensus 1 ~tt~W~~P~~~-----------~~LP~GWe~~~d~~g~~YYvnh~t~~T~We~P~~~ 46 (49)
T 2dwv_A 1 GSSGSSGPLER-----------EGLPPGWERVESSEFGTYYVDHTNKRAQYRHPSGP 46 (49)
T ss_dssp CCSSSCCSCCS-----------SCCCTTEEEEEETTTEEEEEETTTTEEESSCCCCC
T ss_pred CeecCcCCCCC-----------CCCCcCcEEEECCCCCEEEEECCCCCEeccCcCCC
Confidence 47899999842 46999999999999999999999999999999975
No 8
>3l4h_A E3 ubiquitin-protein ligase HECW1; E3 ligase, WW domain, UBL-conjugation pathway, structural GE structural genomics consortium, SGC, coiled coil; HET: MSE; 1.80A {Homo sapiens}
Probab=99.65 E-value=7.7e-18 Score=125.43 Aligned_cols=61 Identities=31% Similarity=0.628 Sum_probs=55.1
Q ss_pred CCCCcEEEECCCCceEeecCCCCeeeccCCCCCCcCCccchhccCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCcH
Q psy8387 80 LPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIPKELRPEQATELGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLTP 159 (176)
Q Consensus 80 LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~~~~~~~~~~~~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~~ 159 (176)
.|.|||.+.+..|++||+|+.+.. ..+||+|||+++|++|++|||||++++|+|+|||+.+
T Consensus 46 ~p~~we~~~~~~~lV~~vn~~~d~-------------------~~pLP~GWE~r~d~~Gr~YfIdH~tktTtW~dPRl~~ 106 (109)
T 3l4h_A 46 DARNFERYQHNRDLVNFINMFADT-------------------RLELPRGWEIKTDQQGKSFFVDHNSRATTFIDPRIPL 106 (109)
T ss_dssp CTHHHHHHTTCHHHHHHHHTTCCT-------------------TSCCCTTEEEEECTTCCEEEEETTTTEEESSCSCCSC
T ss_pred CCcChhhhcCcCCceEEeccCCCC-------------------CCCCCCCCeEEECCCCCEEEEeCCCCCEeeCCCCccc
Confidence 689999999999999999998521 2469999999999999999999999999999999864
No 9
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens}
Probab=99.59 E-value=8.7e-16 Score=94.19 Aligned_cols=35 Identities=51% Similarity=1.017 Sum_probs=32.7
Q ss_pred cCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCC
Q psy8387 123 LGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRL 157 (176)
Q Consensus 123 ~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl 157 (176)
..+||+|||+++|.+|++|||||.|++|+|+|||+
T Consensus 4 ~~~LP~gWe~~~~~~G~~Yy~nh~t~~ttW~~Prl 38 (38)
T 2law_A 4 EGPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRL 38 (38)
T ss_dssp -CCCSSSCCEEEETTTEEEEEETTTTEEESSCTTC
T ss_pred cCCCCCCcEEEECCCCCEEEEECCCCCEeCCCCCC
Confidence 35799999999999999999999999999999996
No 10
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.58 E-value=1.7e-15 Score=93.88 Aligned_cols=36 Identities=36% Similarity=0.717 Sum_probs=33.7
Q ss_pred cCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCc
Q psy8387 123 LGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLT 158 (176)
Q Consensus 123 ~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~ 158 (176)
..+||+|||+++|.+|++|||||+|++|+|+||+++
T Consensus 5 ~~~LP~gWe~~~~~~Gr~Yy~nh~t~~ttW~~P~~s 40 (40)
T 2ysg_A 5 SSGLPYGWEEAYTADGIKYFINHVTQTTSWIHPVMS 40 (40)
T ss_dssp SSCCCTTEEEEECSSSCEEEEESSSCCEECCCCCCC
T ss_pred cCCCCCCcEEEEcCCCCEEEEECCCCcCcCCCCCCC
Confidence 457999999999999999999999999999999974
No 11
>2djy_A SMAD ubiquitination regulatory factor 2; beta sheet, polyproline type II helix, PPII, ligase/signaling protein complex; NMR {Homo sapiens} PDB: 2lb1_A
Probab=99.58 E-value=1.7e-15 Score=94.96 Aligned_cols=37 Identities=76% Similarity=1.364 Sum_probs=34.4
Q ss_pred cCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCcH
Q psy8387 123 LGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLTP 159 (176)
Q Consensus 123 ~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~~ 159 (176)
..+||+|||+++|.+|++|||||+|++|+|+|||+.+
T Consensus 5 ~~~LP~GWe~~~~~~G~~Yy~nh~t~~ttW~~Pr~~~ 41 (42)
T 2djy_A 5 SGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSA 41 (42)
T ss_dssp CSCCCSSEEEEECSSSCEEEEETTTTEEESSCTTTSC
T ss_pred cCCCCcCcEEEECCCCCEEEEECCCCCEeCCCCCCCC
Confidence 4579999999999999999999999999999999863
No 12
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.57 E-value=2.7e-15 Score=92.96 Aligned_cols=36 Identities=53% Similarity=0.944 Sum_probs=33.6
Q ss_pred cCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCc
Q psy8387 123 LGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLT 158 (176)
Q Consensus 123 ~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~ 158 (176)
..+||+|||+++|.+|++|||||+|++|+|+|||+.
T Consensus 5 ~~~LP~gWe~~~~~~G~~Yy~nh~t~~ttw~~Pr~~ 40 (40)
T 2ysf_A 5 SSGLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTG 40 (40)
T ss_dssp CCCCCSSEEEEECTTCCEEEEETTTCCEESSCTTTC
T ss_pred cCCCCcCcEEEEcCCCCEEEEECCCCcEecCCCCCC
Confidence 357999999999999999999999999999999973
No 13
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus}
Probab=99.55 E-value=4.9e-15 Score=89.54 Aligned_cols=34 Identities=56% Similarity=1.058 Sum_probs=32.5
Q ss_pred CCCCCCceEEEcCCCceEEeeCCCCeeeccCCCC
Q psy8387 124 GNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRL 157 (176)
Q Consensus 124 ~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl 157 (176)
.+||+|||+++|.+|++|||||.|++|+|++|++
T Consensus 3 ~~LP~GWe~~~d~~G~~Yy~n~~t~~t~We~P~l 36 (36)
T 1wr3_A 3 PPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSL 36 (36)
T ss_dssp SCSCTTEEEEECSSSCEEEEETTTCCEESSCSCC
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCEeeeCcCC
Confidence 4799999999999999999999999999999985
No 14
>2l4j_A YES-associated protein 2 (YAP2); WW domain, medaka, transcription; NMR {Oryzias latipes}
Probab=99.54 E-value=7.1e-15 Score=93.78 Aligned_cols=36 Identities=50% Similarity=0.990 Sum_probs=34.0
Q ss_pred cCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCc
Q psy8387 123 LGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLT 158 (176)
Q Consensus 123 ~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~ 158 (176)
..+||+|||+++|.+|++|||||+|++|+|+||++.
T Consensus 9 ~~~LP~gWe~~~~~~G~~Yyinh~t~~TtWe~Pr~~ 44 (46)
T 2l4j_A 9 SGPLPEGWEQAITPEGEIYYINHKNKTTSWLDPRLE 44 (46)
T ss_dssp TSCCCTTCEEEECTTSCEEEEETTTTEEECSCCSSC
T ss_pred CCCCCcCceeEECCCCCEEEEECCCCCEeCCCCCcC
Confidence 457999999999999999999999999999999975
No 15
>2ez5_W Dnedd4, E3 ubiquitin-protein ligase NEDD4; WW domain, PY motif, binding affinity, signalling protein,ligase; NMR {Drosophila melanogaster}
Probab=99.53 E-value=7.5e-15 Score=93.65 Aligned_cols=37 Identities=35% Similarity=0.788 Sum_probs=34.3
Q ss_pred cCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCcH
Q psy8387 123 LGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLTP 159 (176)
Q Consensus 123 ~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~~ 159 (176)
..+||+|||+++|.+|++|||||+|++|+|+|||+..
T Consensus 8 ~~~LP~gWe~~~~~~Gr~Yyinh~t~~TtW~~Pr~~~ 44 (46)
T 2ez5_W 8 EEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRNGR 44 (46)
T ss_dssp SCCCCTTEEEEECTTSSEEEEETTTTEEESBCTTTCC
T ss_pred CCCCCcCcEEEEcCCCCEEEEECCCCCEeccCCCCCC
Confidence 3579999999999999999999999999999999853
No 16
>2kyk_A E3 ubiquitin-protein ligase itchy homolog; LMP2A, PY motif, WW domain; NMR {Homo sapiens}
Probab=99.53 E-value=8.2e-15 Score=90.15 Aligned_cols=36 Identities=56% Similarity=1.051 Sum_probs=33.5
Q ss_pred cCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCc
Q psy8387 123 LGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLT 158 (176)
Q Consensus 123 ~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~ 158 (176)
..+||+|||+++|.+|++|||||.|++|+|++|++.
T Consensus 4 ~~~LP~gWe~~~d~~G~~YY~n~~t~~t~We~P~~e 39 (39)
T 2kyk_A 4 MGPLPPGWERRVDNMGRIYYVDHFTRTTTWQRPTLE 39 (39)
T ss_dssp SCCCCSSCEEEECTTSCEEEECSSSCCEECCCCCCC
T ss_pred cCCCCCCcEEEEcCCCCEEEEECCCCCEeccCCCCC
Confidence 357999999999999999999999999999999963
No 17
>1wr7_A NEDD4-2; all-beta, ligase; NMR {Mus musculus}
Probab=99.53 E-value=6.2e-15 Score=91.73 Aligned_cols=35 Identities=51% Similarity=1.086 Sum_probs=33.0
Q ss_pred cCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCC
Q psy8387 123 LGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRL 157 (176)
Q Consensus 123 ~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl 157 (176)
..+||+|||+++|.+|++|||||.|++|+|+|||+
T Consensus 6 ~~~LP~gWe~~~~~~G~~Yy~n~~t~~t~We~Pr~ 40 (41)
T 1wr7_A 6 QSFLPPGWEMRIAPNGRPFFIDHNTKTTTWEDPRL 40 (41)
T ss_dssp CCSSCTTEEEEECTTSCEEEEETTTTEEESSCGGG
T ss_pred cCCCCCCcEEEEcCCCCEEEEECCCCCeecCCCCC
Confidence 35799999999999999999999999999999986
No 18
>1wr4_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} PDB: 2lb2_A*
Probab=99.52 E-value=1.2e-14 Score=87.51 Aligned_cols=34 Identities=59% Similarity=1.074 Sum_probs=32.3
Q ss_pred CCCCCCceEEEcCCCceEEeeCCCCeeeccCCCC
Q psy8387 124 GNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRL 157 (176)
Q Consensus 124 ~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl 157 (176)
.+||+|||++.|.+|++|||||.|++|+|++|++
T Consensus 3 ~~LP~gWe~~~d~~g~~Yy~n~~t~~t~W~~P~~ 36 (36)
T 1wr4_A 3 PGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIM 36 (36)
T ss_dssp TTCCTTEEEEECSSSCEEEEETTTTEEESSCCCC
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCEeCcCCCC
Confidence 4799999999999999999999999999999985
No 19
>2zaj_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; BAI1-associated protein 1 (BAP-1); NMR {Homo sapiens}
Probab=99.52 E-value=1.1e-14 Score=94.23 Aligned_cols=36 Identities=42% Similarity=0.669 Sum_probs=33.9
Q ss_pred cCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCc
Q psy8387 123 LGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLT 158 (176)
Q Consensus 123 ~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~ 158 (176)
..+||+|||+++|.+|++|||||.|++|+|+||++.
T Consensus 11 ~~~LP~GWe~~~d~~Gr~YYvnh~t~~T~We~P~~~ 46 (49)
T 2zaj_A 11 ELELPAGWEKIEDPVYGIYYVDHINRKTQYENPSGP 46 (49)
T ss_dssp SSCCCTTEEEEEETTTEEEEEETTTTEEESSCCCSS
T ss_pred CCCCCcCceEEEcCCCCEEEEeCCCCCEecCCCCCC
Confidence 457999999999999999999999999999999985
No 20
>2jmf_A E3 ubiquitin-protein ligase suppressor of deltex; WW domain, solution, complex, ligase/signaling protein complex; NMR {Drosophila melanogaster} SCOP: b.72.1.1 PDB: 2op7_A
Probab=99.52 E-value=1.1e-14 Score=95.49 Aligned_cols=37 Identities=57% Similarity=1.087 Sum_probs=34.6
Q ss_pred ccCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCc
Q psy8387 122 ELGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLT 158 (176)
Q Consensus 122 ~~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~ 158 (176)
...+||+|||+++|.+|++|||||+|++|+|+|||+.
T Consensus 15 ~~~~LP~GWe~~~~~~Gr~Yyinh~tk~TtW~dPr~~ 51 (53)
T 2jmf_A 15 NEGPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPRPG 51 (53)
T ss_dssp SCSCCCTTEEEEECTTSCEEEEETTTCCEESSCCCSS
T ss_pred cCCCCCcCcEEEEcCCCCEEEEeCCCCcEecCCCCCC
Confidence 4568999999999999999999999999999999985
No 21
>2kpz_A E3 ubiquitin-protein ligase NEDD4; WW domain, HTLV1, NEDD4, human modular domain, complex, HOST interaction, ligase; NMR {Homo sapiens} PDB: 2kq0_A 2laj_A*
Probab=99.51 E-value=1.3e-14 Score=93.58 Aligned_cols=38 Identities=50% Similarity=1.007 Sum_probs=33.2
Q ss_pred cCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCcHH
Q psy8387 123 LGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLTPA 160 (176)
Q Consensus 123 ~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~~~ 160 (176)
..+||+|||+++|.+|++|||||+|++|+|+||+....
T Consensus 10 ~~~LP~gWe~~~~~~G~~Yy~nh~T~~ttWe~Pr~~~p 47 (49)
T 2kpz_A 10 QGFLPKGWEVRHAPNGRPFFIDHNTKTTTWEDPRLKIP 47 (49)
T ss_dssp --CCCTTEEEEECTTSCEEEEETTTTEEESSCTTCC--
T ss_pred CCCCCCCcEEEECCCCCEEEEECCCCCEecCCCCCCCC
Confidence 46799999999999999999999999999999998753
No 22
>1i5h_W Rnedd4, ubiquitin ligase NEDD4; NEDD4, WW domains, ENAC, PY motif, liddle syndrome, proline-rich, ligase; NMR {Rattus norvegicus} SCOP: b.72.1.1 PDB: 1yiu_A 2jo9_A 2joc_A*
Probab=99.51 E-value=1.4e-14 Score=93.90 Aligned_cols=38 Identities=47% Similarity=1.075 Sum_probs=34.8
Q ss_pred ccCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCcH
Q psy8387 122 ELGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLTP 159 (176)
Q Consensus 122 ~~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~~ 159 (176)
+..+||+|||+++|.+|++|||||+|++|+|+||+...
T Consensus 8 ~~~~LP~gWe~~~~~~Gr~Yy~nh~t~~T~We~Pr~~~ 45 (50)
T 1i5h_W 8 DLGPLPPGWEERTHTDGRVFFINHNIKKTQWEDPRMQN 45 (50)
T ss_dssp CCSSCSTTEEEEECTTSCEEEEETTTTEEESSCTTTSC
T ss_pred cCCCCCcCcEEEEcCCCCEEEEECCCCCEEeeCCCCCc
Confidence 34679999999999999999999999999999999864
No 23
>2ysb_A Salvador homolog 1 protein; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: k.22.1.1
Probab=99.51 E-value=1.4e-14 Score=93.59 Aligned_cols=37 Identities=46% Similarity=0.813 Sum_probs=34.3
Q ss_pred cCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCcH
Q psy8387 123 LGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLTP 159 (176)
Q Consensus 123 ~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~~ 159 (176)
..+||+|||+++|.+|++|||||+|++|+|+||+...
T Consensus 9 ~~~LP~gWe~~~~~~Gr~Yy~nh~t~~T~W~~P~~~~ 45 (49)
T 2ysb_A 9 DLPLPPGWSVDWTMRGRKYYIDHNTNTTHWSHPLESG 45 (49)
T ss_dssp CCCCCTTEEEEECSSSCEEEEETTTTEEESSCTTTSC
T ss_pred CCCCCCCceEEECCCCCEEEEEcCCCCEEecCCCCCC
Confidence 4579999999999999999999999999999999864
No 24
>1e0m_A Wwprototype; SH3 prototype, protein design, de novo protein; NMR {} SCOP: k.22.1.1
Probab=99.49 E-value=3.3e-14 Score=86.17 Aligned_cols=35 Identities=46% Similarity=1.032 Sum_probs=32.9
Q ss_pred CCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCc
Q psy8387 124 GNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLT 158 (176)
Q Consensus 124 ~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~ 158 (176)
.+||+|||+++|++|++||+||.|++|+|++|+..
T Consensus 2 ~~LP~gW~~~~~~~G~~Yy~n~~t~~t~W~~P~~~ 36 (37)
T 1e0m_A 2 MGLPPGWDEYKTHNGKTYYYNHNTKTSTWTDPRMS 36 (37)
T ss_dssp CCSCTTEEEEECSSCCEEEEETTTTEEESSCTTTC
T ss_pred CCCCCCcEEEECCCCCEEEEECCCCCeeeeCcCCC
Confidence 46999999999999999999999999999999974
No 25
>1wmv_A WWOX, WW domain containing oxidoreductase; all-beta, apoptosis; NMR {Homo sapiens}
Probab=99.49 E-value=1e-14 Score=96.07 Aligned_cols=39 Identities=41% Similarity=0.879 Sum_probs=35.6
Q ss_pred cCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCcHHH
Q psy8387 123 LGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLTPAI 161 (176)
Q Consensus 123 ~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~~~~ 161 (176)
..+||+|||+++|.+|++|||||+|++|+|+|||+...+
T Consensus 9 ~~~LP~GWe~~~~~~G~~Yyinh~tk~TtwedPr~~~~~ 47 (54)
T 1wmv_A 9 AGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRLAFTV 47 (54)
T ss_dssp SSCSCTTEEEEECTTSCEEEEESSSCCEESSCTTSSCCC
T ss_pred CCCCCcCcEEEECCCCCEEEEeCCCCCEeecCCCCcccc
Confidence 357999999999999999999999999999999987554
No 26
>2ysd_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.48 E-value=3.2e-14 Score=94.68 Aligned_cols=39 Identities=44% Similarity=0.876 Sum_probs=35.4
Q ss_pred ccCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCcHH
Q psy8387 122 ELGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLTPA 160 (176)
Q Consensus 122 ~~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~~~ 160 (176)
...+||+|||+++|.+|++|||||+|++|+|+|||+...
T Consensus 11 ~~~~LP~GWe~~~~~~Gr~Yyinh~tk~TtWe~Pr~~~~ 49 (57)
T 2ysd_A 11 NLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNK 49 (57)
T ss_dssp CCCSCCSSEEEEECSSCCEEEEETTTTEEESSCTTTCSS
T ss_pred CCCCCCcCcEEEECCCCCEEEEECCCCcEecCCCCCccc
Confidence 346799999999999999999999999999999998643
No 27
>2yse_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI-1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=1.5e-14 Score=97.21 Aligned_cols=39 Identities=41% Similarity=0.651 Sum_probs=35.3
Q ss_pred cCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCcHHH
Q psy8387 123 LGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLTPAI 161 (176)
Q Consensus 123 ~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~~~~ 161 (176)
..+||+|||+++|.+|++|||||+|++|+|+||++...-
T Consensus 11 ~~~LP~GWE~~~d~~Gr~YYvnh~tk~T~We~P~~~~~~ 49 (60)
T 2yse_A 11 ELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKR 49 (60)
T ss_dssp CSSCCSSEEEEECSSSCEEEEETTTTEEESSCHHHHHHH
T ss_pred CCCCCCCcEEEECCCCCEEEEeCCCCCeeccCCCchhhh
Confidence 457999999999999999999999999999999986443
No 28
>2dmv_A Itchy homolog E3 ubiquitin protein ligase; WW domain, three stranded antiparallel beta sheet, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=3.9e-14 Score=88.92 Aligned_cols=36 Identities=44% Similarity=0.866 Sum_probs=33.6
Q ss_pred cCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCc
Q psy8387 123 LGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLT 158 (176)
Q Consensus 123 ~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~ 158 (176)
..+||+|||+++|++|++|||||.|++|+|++|+..
T Consensus 5 ~~~LP~GWe~~~d~~Gr~YY~n~~t~~T~We~P~~~ 40 (43)
T 2dmv_A 5 SSGLPPGWEQRVDQHGRVYYVDHVEKRTTWDRPSGP 40 (43)
T ss_dssp CCSCCTTEEEEECTTSCEEEEETTTCCEESSCSSSC
T ss_pred CCCCCCCceEEECCCCCEEEEECCCCCEecCCcCCC
Confidence 357999999999999999999999999999999875
No 29
>2ysh_A GAS-7, growth-arrest-specific protein 7; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.41 E-value=2.3e-13 Score=83.94 Aligned_cols=35 Identities=34% Similarity=0.768 Sum_probs=32.8
Q ss_pred cCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCC
Q psy8387 123 LGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRL 157 (176)
Q Consensus 123 ~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl 157 (176)
..+||+|||+++|.+|++||+||.|++|+|++|+.
T Consensus 5 ~~~LP~gW~~~~d~~Gr~YY~n~~T~~t~We~P~~ 39 (40)
T 2ysh_A 5 SSGLPPGWQSYLSPQGRRYYVNTTTNETTWERPSS 39 (40)
T ss_dssp CSSCCTTCEEEECTTSCEEEECSSSCCEESSSCCC
T ss_pred CCCCCCCceEEECCCCCEEEEECCCCCEeCCCCCC
Confidence 35799999999999999999999999999999985
No 30
>2ho2_A Fe65 protein, amyloid beta A4 protein-binding family B member 1; WW domain, beta sheet, Fe65, protein binding; 1.33A {Homo sapiens} SCOP: b.72.1.1 PDB: 2idh_A* 2oei_A
Probab=99.38 E-value=4.4e-13 Score=82.29 Aligned_cols=34 Identities=38% Similarity=0.636 Sum_probs=31.2
Q ss_pred CCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCc
Q psy8387 124 GNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLT 158 (176)
Q Consensus 124 ~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~ 158 (176)
.+||+|||++.|..| +||+||.|++|+|++|+..
T Consensus 2 ~~LP~GWe~~~d~~g-~YY~n~~t~~tqWe~P~~~ 35 (38)
T 2ho2_A 2 SDLPAGWMRVQDTSG-TYYWHIPTGTTQWEPPGRA 35 (38)
T ss_dssp CCSCTTEEEEECSSC-EEEEETTTTEEESSCCCC-
T ss_pred CcCCCCceEEEeCCC-CEEEecCCCCEeccCCCCC
Confidence 369999999999999 9999999999999999875
No 31
>1ymz_A CC45; artificial protein, computational design, unknown function; NMR {Synthetic} SCOP: k.22.1.1
Probab=99.37 E-value=6e-13 Score=83.30 Aligned_cols=35 Identities=37% Similarity=0.787 Sum_probs=32.7
Q ss_pred CCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCc
Q psy8387 124 GNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLT 158 (176)
Q Consensus 124 ~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~ 158 (176)
.+||+||++++|.+|++||+||.|++|+|++|+..
T Consensus 7 ~~LP~gW~~~~~~~Gr~YY~n~~T~~t~We~P~~~ 41 (43)
T 1ymz_A 7 MPLPPGWERRTDVEGKVYYFNVRTLTTTWERPTII 41 (43)
T ss_dssp CCCCSSEEEEECTTSCEEEEETTTTEEESSCCCSC
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCCcccCCccc
Confidence 36999999999999999999999999999999864
No 32
>1jmq_A YAP65, 65 kDa YES-associated protein; polyproline ligand, YAP65 mutant, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1k9q_A* 1k9r_A 1k5r_A* 2lax_A* 2lay_A*
Probab=99.37 E-value=2.3e-13 Score=86.40 Aligned_cols=36 Identities=42% Similarity=0.806 Sum_probs=33.9
Q ss_pred cCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCc
Q psy8387 123 LGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLT 158 (176)
Q Consensus 123 ~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~ 158 (176)
..+||+|||++++.+|++|||||++++|+|+|||..
T Consensus 6 ~~~LP~GWe~~~~~~gr~y~~n~~t~~t~W~dPr~~ 41 (46)
T 1jmq_A 6 DVPLPAGWEMAKTSSGQRYFKNHIDQTTTWQDPRKA 41 (46)
T ss_dssp SCCCCTTBCCBCCSSCCCBEEETTTTEEESSCTTTS
T ss_pred CCCCCcCcEEEEcCCCceEEEEecCCceeecCCCch
Confidence 457999999999999999999999999999999986
No 33
>2ysc_A Amyloid beta A4 precursor protein-binding family B member 3; Fe65-like protein 2, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=99.29 E-value=2.2e-12 Score=79.60 Aligned_cols=33 Identities=39% Similarity=0.792 Sum_probs=30.5
Q ss_pred cCCCCCCceEEEcCCCceEEeeCCCCeeeccCCC
Q psy8387 123 LGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPR 156 (176)
Q Consensus 123 ~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPr 156 (176)
..+||+|||+++|.+| .||+||.|++|+|++|+
T Consensus 6 ~~~LP~GWe~~~~~~G-~YY~n~~t~~tqWe~P~ 38 (39)
T 2ysc_A 6 SGGLPPGWRKIHDAAG-TYYWHVPSGSTQWQRPT 38 (39)
T ss_dssp CCCCCTTEEEEEETTE-EEEEESSSCCEESSCCC
T ss_pred CCCCCCCcEEEEcCCC-CEEEEcCCCCEeccCCC
Confidence 3579999999999999 59999999999999996
No 34
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.25 E-value=7.9e-12 Score=77.23 Aligned_cols=37 Identities=35% Similarity=0.618 Sum_probs=33.9
Q ss_pred CCCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCC
Q psy8387 75 QQPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRI 111 (176)
Q Consensus 75 ~s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~ 111 (176)
+...+||+|||++++.+|++|||||.|++|+|++|+.
T Consensus 3 ~~~~~LP~gWe~~~~~~G~~Yy~nh~t~~ttw~~Pr~ 39 (40)
T 2ysf_A 3 SGSSGLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRT 39 (40)
T ss_dssp CCCCCCCSSEEEEECTTCCEEEEETTTCCEESSCTTT
T ss_pred CCcCCCCcCcEEEEcCCCCEEEEECCCCcEecCCCCC
Confidence 3457799999999999999999999999999999985
No 35
>2ysd_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.24 E-value=1.4e-11 Score=81.83 Aligned_cols=47 Identities=30% Similarity=0.588 Sum_probs=39.6
Q ss_pred CCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCCCcCCccchhccCCCCCC
Q psy8387 76 QPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIPKELRPEQATELGNLPPG 129 (176)
Q Consensus 76 s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~~~~~~~~~~~~~~LP~G 129 (176)
...+||+|||++++.+|++|||||.|++|+|++|+.... ...+||+|
T Consensus 11 ~~~~LP~GWe~~~~~~Gr~Yyinh~tk~TtWe~Pr~~~~-------~~~plp~g 57 (57)
T 2ysd_A 11 NLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNK-------QQSGPSSG 57 (57)
T ss_dssp CCCSCCSSEEEEECSSCCEEEEETTTTEEESSCTTTCSS-------CCCSCCCC
T ss_pred CCCCCCcCcEEEECCCCCEEEEECCCCcEecCCCCCccc-------cCCCCCCC
Confidence 456799999999999999999999999999999996532 12478876
No 36
>2ez5_W Dnedd4, E3 ubiquitin-protein ligase NEDD4; WW domain, PY motif, binding affinity, signalling protein,ligase; NMR {Drosophila melanogaster}
Probab=99.24 E-value=1.2e-11 Score=78.74 Aligned_cols=38 Identities=24% Similarity=0.556 Sum_probs=34.8
Q ss_pred CCCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCC
Q psy8387 75 QQPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIP 112 (176)
Q Consensus 75 ~s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~ 112 (176)
.+..+||+|||++++.+|++|||||.|++|+|++|+..
T Consensus 6 ~~~~~LP~gWe~~~~~~Gr~Yyinh~t~~TtW~~Pr~~ 43 (46)
T 2ez5_W 6 GEEEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRNG 43 (46)
T ss_dssp CCSCCCCTTEEEEECTTSSEEEEETTTTEEESBCTTTC
T ss_pred CCCCCCCcCcEEEEcCCCCEEEEECCCCCEeccCCCCC
Confidence 45567999999999999999999999999999999865
No 37
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.23 E-value=1.1e-11 Score=76.60 Aligned_cols=36 Identities=31% Similarity=0.567 Sum_probs=33.3
Q ss_pred CCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCC
Q psy8387 76 QPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRI 111 (176)
Q Consensus 76 s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~ 111 (176)
...+||+|||++++.+|++|||||.|++|+|++|+.
T Consensus 4 ~~~~LP~gWe~~~~~~Gr~Yy~nh~t~~ttW~~P~~ 39 (40)
T 2ysg_A 4 GSSGLPYGWEEAYTADGIKYFINHVTQTTSWIHPVM 39 (40)
T ss_dssp SSSCCCTTEEEEECSSSCEEEEESSSCCEECCCCCC
T ss_pred CcCCCCCCcEEEEcCCCCEEEEECCCCcCcCCCCCC
Confidence 456799999999999999999999999999999974
No 38
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens}
Probab=99.23 E-value=5.5e-12 Score=77.10 Aligned_cols=36 Identities=33% Similarity=0.762 Sum_probs=32.2
Q ss_pred CCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCC
Q psy8387 76 QPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRI 111 (176)
Q Consensus 76 s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~ 111 (176)
...+||+|||++++.+|++||+||.|++|+|++|+.
T Consensus 3 ~~~~LP~gWe~~~~~~G~~Yy~nh~t~~ttW~~Prl 38 (38)
T 2law_A 3 MEGPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRL 38 (38)
T ss_dssp --CCCSSSCCEEEETTTEEEEEETTTTEEESSCTTC
T ss_pred ccCCCCCCcEEEECCCCCEEEEECCCCCEeCCCCCC
Confidence 356799999999999999999999999999999973
No 39
>2jmf_A E3 ubiquitin-protein ligase suppressor of deltex; WW domain, solution, complex, ligase/signaling protein complex; NMR {Drosophila melanogaster} SCOP: b.72.1.1 PDB: 2op7_A
Probab=99.21 E-value=1.6e-11 Score=80.37 Aligned_cols=40 Identities=38% Similarity=0.557 Sum_probs=36.1
Q ss_pred CCCCCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCC
Q psy8387 73 LLQQPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIP 112 (176)
Q Consensus 73 a~~s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~ 112 (176)
......+||+|||++++.+|++|||||.|++|+|++|+..
T Consensus 12 ~~~~~~~LP~GWe~~~~~~Gr~Yyinh~tk~TtW~dPr~~ 51 (53)
T 2jmf_A 12 SLINEGPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPRPG 51 (53)
T ss_dssp TTTSCSCCCTTEEEEECTTSCEEEEETTTCCEESSCCCSS
T ss_pred ccCcCCCCCcCcEEEEcCCCCEEEEeCCCCcEecCCCCCC
Confidence 4456678999999999999999999999999999999864
No 40
>2jv4_A Peptidyl-prolyl CIS/trans isomerase; ppiase domain, WW domain group IV, rotamase; NMR {Emericella nidulans}
Probab=99.20 E-value=1.4e-11 Score=81.03 Aligned_cols=35 Identities=34% Similarity=0.707 Sum_probs=32.5
Q ss_pred CCCCCCceEEEcC-CCceEEeeCCCCeeeccCCCCc
Q psy8387 124 GNLPPGWEVRQTA-SGRYYYVDHNNRTTQFTDPRLT 158 (176)
Q Consensus 124 ~~LP~GWE~~~d~-~Gr~YYiNh~tr~TtWedPrl~ 158 (176)
.+||+||+++.|. .|++||+|+.|++|+|++|...
T Consensus 6 ~~LP~GW~~~~~~~~Gr~YY~N~~T~~sqWe~P~~~ 41 (54)
T 2jv4_A 6 TGLPAGWEVRHSNSKNLPYYFNPATRESRWEPPADT 41 (54)
T ss_dssp CCCCSSCCEEECSSSSCEEEEETTTTEEESSCCTTS
T ss_pred CCCCCCcEEEEECCCCCEEEEECCCCcEEecCCCCc
Confidence 4699999999997 8999999999999999999875
No 41
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=99.19 E-value=1.1e-11 Score=88.65 Aligned_cols=37 Identities=51% Similarity=0.979 Sum_probs=34.3
Q ss_pred cCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCcH
Q psy8387 123 LGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLTP 159 (176)
Q Consensus 123 ~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~~ 159 (176)
..+||+|||+++|.+|++|||||.|++|+|++|+...
T Consensus 10 ~~~LP~gWe~~~~~~Gr~Yy~n~~t~~t~W~~P~~~~ 46 (88)
T 1tk7_A 10 LGPLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQG 46 (88)
T ss_dssp TSSSSSSCCEEEETTTEEEEEETTTTEEEEESCCCTT
T ss_pred cCCCCCCcEEEECCCCCEEEEECCCCCeEeecccccc
Confidence 4579999999999999999999999999999999753
No 42
>2djy_A SMAD ubiquitination regulatory factor 2; beta sheet, polyproline type II helix, PPII, ligase/signaling protein complex; NMR {Homo sapiens} PDB: 2lb1_A
Probab=99.19 E-value=2.1e-11 Score=76.20 Aligned_cols=36 Identities=39% Similarity=0.756 Sum_probs=33.2
Q ss_pred CCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCC
Q psy8387 77 PPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIP 112 (176)
Q Consensus 77 ~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~ 112 (176)
..+||+|||++++.+|++|||||.|++|+|++|+..
T Consensus 5 ~~~LP~GWe~~~~~~G~~Yy~nh~t~~ttW~~Pr~~ 40 (42)
T 2djy_A 5 SGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLS 40 (42)
T ss_dssp CSCCCSSEEEEECSSSCEEEEETTTTEEESSCTTTS
T ss_pred cCCCCcCcEEEECCCCCEEEEECCCCCEeCCCCCCC
Confidence 457999999999999999999999999999999854
No 43
>2l4j_A YES-associated protein 2 (YAP2); WW domain, medaka, transcription; NMR {Oryzias latipes}
Probab=99.18 E-value=2.9e-11 Score=76.92 Aligned_cols=38 Identities=29% Similarity=0.712 Sum_probs=34.2
Q ss_pred CCCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCC
Q psy8387 75 QQPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIP 112 (176)
Q Consensus 75 ~s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~ 112 (176)
....+||+|||++++.+|++|||||.|++|+|++|+..
T Consensus 7 ~~~~~LP~gWe~~~~~~G~~Yyinh~t~~TtWe~Pr~~ 44 (46)
T 2l4j_A 7 PASGPLPEGWEQAITPEGEIYYINHKNKTTSWLDPRLE 44 (46)
T ss_dssp TTTSCCCTTCEEEECTTSCEEEEETTTTEEECSCCSSC
T ss_pred CcCCCCCcCceeEECCCCCEEEEECCCCCEeCCCCCcC
Confidence 34567999999999999999999999999999999853
No 44
>2ysb_A Salvador homolog 1 protein; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: k.22.1.1
Probab=99.18 E-value=3.3e-11 Score=77.69 Aligned_cols=38 Identities=24% Similarity=0.513 Sum_probs=34.3
Q ss_pred CCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCCC
Q psy8387 76 QPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIPK 113 (176)
Q Consensus 76 s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~~ 113 (176)
...+||+|||++++.+|++|||||.|++|+|++|+...
T Consensus 8 ~~~~LP~gWe~~~~~~Gr~Yy~nh~t~~T~W~~P~~~~ 45 (49)
T 2ysb_A 8 EDLPLPPGWSVDWTMRGRKYYIDHNTNTTHWSHPLESG 45 (49)
T ss_dssp CCCCCCTTEEEEECSSSCEEEEETTTTEEESSCTTTSC
T ss_pred CCCCCCCCceEEECCCCCEEEEEcCCCCEEecCCCCCC
Confidence 44579999999999999999999999999999998653
No 45
>2kxq_A E3 ubiquitin-protein ligase smurf2; WW, smurf2, TGF-beta, modular binding, protein BIN; NMR {Homo sapiens} PDB: 2lb0_A* 2laz_A*
Probab=99.17 E-value=2.2e-11 Score=87.36 Aligned_cols=36 Identities=31% Similarity=0.708 Sum_probs=33.6
Q ss_pred CCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCcH
Q psy8387 124 GNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLTP 159 (176)
Q Consensus 124 ~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~~ 159 (176)
.+||+|||+++|.+|++|||||.|++|+|++|+...
T Consensus 8 ~~LP~gWe~~~~~~Gr~YY~n~~t~~t~W~~P~~~~ 43 (90)
T 2kxq_A 8 PDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPR 43 (90)
T ss_dssp CSCCSSCEEEEETTTEEEEEETTTTEEESSCSSSCS
T ss_pred CCCCCCcEEEECCCCCEEEEECCCCeEeeecccccc
Confidence 479999999999999999999999999999999753
No 46
>1wr7_A NEDD4-2; all-beta, ligase; NMR {Mus musculus}
Probab=99.17 E-value=2.1e-11 Score=75.63 Aligned_cols=36 Identities=36% Similarity=0.754 Sum_probs=33.2
Q ss_pred CCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCC
Q psy8387 76 QPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRI 111 (176)
Q Consensus 76 s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~ 111 (176)
...+||+||+++++.+|++|||||.|++|+|++|+.
T Consensus 5 ~~~~LP~gWe~~~~~~G~~Yy~n~~t~~t~We~Pr~ 40 (41)
T 1wr7_A 5 IQSFLPPGWEMRIAPNGRPFFIDHNTKTTTWEDPRL 40 (41)
T ss_dssp CCCSSCTTEEEEECTTSCEEEEETTTTEEESSCGGG
T ss_pred ccCCCCCCcEEEEcCCCCEEEEECCCCCeecCCCCC
Confidence 456799999999999999999999999999999974
No 47
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus}
Probab=99.15 E-value=3.4e-11 Score=72.47 Aligned_cols=33 Identities=30% Similarity=0.772 Sum_probs=31.4
Q ss_pred CCCCCCcEEEECCCCceEeecCCCCeeeccCCC
Q psy8387 78 PDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPR 110 (176)
Q Consensus 78 ~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~ 110 (176)
.+||+||+++.+.+|++||+|+.|++|+|++|+
T Consensus 3 ~~LP~GWe~~~d~~G~~Yy~n~~t~~t~We~P~ 35 (36)
T 1wr3_A 3 PPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPS 35 (36)
T ss_dssp SCSCTTEEEEECSSSCEEEEETTTCCEESSCSC
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCEeeeCcC
Confidence 569999999999999999999999999999996
No 48
>2dmv_A Itchy homolog E3 ubiquitin protein ligase; WW domain, three stranded antiparallel beta sheet, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.15 E-value=4.4e-11 Score=74.88 Aligned_cols=38 Identities=34% Similarity=0.677 Sum_probs=34.2
Q ss_pred CCCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCC
Q psy8387 75 QQPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIP 112 (176)
Q Consensus 75 ~s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~ 112 (176)
+...+||+||+++++.+|++||+|+.|++|+|++|+..
T Consensus 3 ~~~~~LP~GWe~~~d~~Gr~YY~n~~t~~T~We~P~~~ 40 (43)
T 2dmv_A 3 SGSSGLPPGWEQRVDQHGRVYYVDHVEKRTTWDRPSGP 40 (43)
T ss_dssp SSCCSCCTTEEEEECTTSCEEEEETTTCCEESSCSSSC
T ss_pred CCCCCCCCCceEEECCCCCEEEEECCCCCEecCCcCCC
Confidence 34567999999999999999999999999999999754
No 49
>2zaj_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; BAI1-associated protein 1 (BAP-1); NMR {Homo sapiens}
Probab=99.14 E-value=3.9e-11 Score=77.40 Aligned_cols=40 Identities=20% Similarity=0.349 Sum_probs=35.6
Q ss_pred CCCCCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCC
Q psy8387 73 LLQQPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIP 112 (176)
Q Consensus 73 a~~s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~ 112 (176)
......+||+|||++++.+|++|||||.|++|+|++|+..
T Consensus 7 ~~~~~~~LP~GWe~~~d~~Gr~YYvnh~t~~T~We~P~~~ 46 (49)
T 2zaj_A 7 GLDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPSGP 46 (49)
T ss_dssp CCCCSSCCCTTEEEEEETTTEEEEEETTTTEEESSCCCSS
T ss_pred ccCCCCCCCcCceEEEcCCCCEEEEeCCCCCEecCCCCCC
Confidence 3445678999999999999999999999999999999854
No 50
>1wr4_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} PDB: 2lb2_A*
Probab=99.14 E-value=4.4e-11 Score=71.71 Aligned_cols=34 Identities=32% Similarity=0.763 Sum_probs=31.8
Q ss_pred CCCCCCCcEEEECCCCceEeecCCCCeeeccCCC
Q psy8387 77 PPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPR 110 (176)
Q Consensus 77 ~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~ 110 (176)
..+||+||+++.+.+|++||+|+.|++++|++|+
T Consensus 2 ~~~LP~gWe~~~d~~g~~Yy~n~~t~~t~W~~P~ 35 (36)
T 1wr4_A 2 SPGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPI 35 (36)
T ss_dssp CTTCCTTEEEEECSSSCEEEEETTTTEEESSCCC
T ss_pred CCCCCCCCEEEECCCCCEEEEECCCCCEeCcCCC
Confidence 3579999999999999999999999999999996
No 51
>2kyk_A E3 ubiquitin-protein ligase itchy homolog; LMP2A, PY motif, WW domain; NMR {Homo sapiens}
Probab=99.14 E-value=5e-11 Score=73.04 Aligned_cols=35 Identities=31% Similarity=0.673 Sum_probs=32.3
Q ss_pred CCCCCCCcEEEECCCCceEeecCCCCeeeccCCCC
Q psy8387 77 PPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRI 111 (176)
Q Consensus 77 ~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~ 111 (176)
..+||+||+++.+.+|++||+||.|++|+|++|+.
T Consensus 4 ~~~LP~gWe~~~d~~G~~YY~n~~t~~t~We~P~~ 38 (39)
T 2kyk_A 4 MGPLPPGWERRVDNMGRIYYVDHFTRTTTWQRPTL 38 (39)
T ss_dssp SCCCCSSCEEEECTTSCEEEECSSSCCEECCCCCC
T ss_pred cCCCCCCcEEEEcCCCCEEEEECCCCCEeccCCCC
Confidence 34799999999999999999999999999999974
No 52
>2e45_A Fe65 protein, amyloid beta A4 precursor protein-binding family B member 1; triple-stranded beta-sheet; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=99.14 E-value=3.6e-11 Score=78.96 Aligned_cols=36 Identities=36% Similarity=0.563 Sum_probs=32.6
Q ss_pred ccCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCc
Q psy8387 122 ELGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLT 158 (176)
Q Consensus 122 ~~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~ 158 (176)
...+||+|||++.|..| +||+||.|++|||+.|...
T Consensus 16 ~~~~LPpGW~~~~D~sG-tYY~h~~T~tTQWerP~~~ 51 (55)
T 2e45_A 16 TDSDLPAGWMRVQDTSG-TYYWHIPTGTTQWEPPGRA 51 (55)
T ss_dssp SCSCCCTTEEEEEETTE-EEEEETTTCCEESSCCCCC
T ss_pred CCCCCCCCCeEeecCCC-CEEEEcCCCCCccCCCCCC
Confidence 45679999999999999 9999999999999999653
No 53
>1i5h_W Rnedd4, ubiquitin ligase NEDD4; NEDD4, WW domains, ENAC, PY motif, liddle syndrome, proline-rich, ligase; NMR {Rattus norvegicus} SCOP: b.72.1.1 PDB: 1yiu_A 2jo9_A 2joc_A*
Probab=99.12 E-value=7.8e-11 Score=76.17 Aligned_cols=38 Identities=34% Similarity=0.704 Sum_probs=34.3
Q ss_pred CCCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCC
Q psy8387 75 QQPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIP 112 (176)
Q Consensus 75 ~s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~ 112 (176)
....+||+|||++++.+|++|||||.|++|+|++|+..
T Consensus 7 ~~~~~LP~gWe~~~~~~Gr~Yy~nh~t~~T~We~Pr~~ 44 (50)
T 1i5h_W 7 NDLGPLPPGWEERTHTDGRVFFINHNIKKTQWEDPRMQ 44 (50)
T ss_dssp SCCSSCSTTEEEEECTTSCEEEEETTTTEEESSCTTTS
T ss_pred ccCCCCCcCcEEEEcCCCCEEEEECCCCCEEeeCCCCC
Confidence 34567999999999999999999999999999999865
No 54
>2kpz_A E3 ubiquitin-protein ligase NEDD4; WW domain, HTLV1, NEDD4, human modular domain, complex, HOST interaction, ligase; NMR {Homo sapiens} PDB: 2kq0_A 2laj_A*
Probab=99.12 E-value=5.7e-11 Score=76.41 Aligned_cols=37 Identities=35% Similarity=0.766 Sum_probs=32.4
Q ss_pred CCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCC
Q psy8387 76 QPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIP 112 (176)
Q Consensus 76 s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~ 112 (176)
...+||+||+++++.+|++|||||.|++|+|++|+..
T Consensus 9 ~~~~LP~gWe~~~~~~G~~Yy~nh~T~~ttWe~Pr~~ 45 (49)
T 2kpz_A 9 EQGFLPKGWEVRHAPNGRPFFIDHNTKTTTWEDPRLK 45 (49)
T ss_dssp ---CCCTTEEEEECTTSCEEEEETTTTEEESSCTTCC
T ss_pred cCCCCCCCcEEEECCCCCEEEEECCCCCEecCCCCCC
Confidence 3467999999999999999999999999999999865
No 55
>1e0m_A Wwprototype; SH3 prototype, protein design, de novo protein; NMR {} SCOP: k.22.1.1
Probab=99.10 E-value=9.7e-11 Score=70.64 Aligned_cols=34 Identities=41% Similarity=0.865 Sum_probs=31.9
Q ss_pred CCCCCCcEEEECCCCceEeecCCCCeeeccCCCC
Q psy8387 78 PDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRI 111 (176)
Q Consensus 78 ~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~ 111 (176)
.+||+||+++.+.+|++||+|+.|++++|++|+.
T Consensus 2 ~~LP~gW~~~~~~~G~~Yy~n~~t~~t~W~~P~~ 35 (37)
T 1e0m_A 2 MGLPPGWDEYKTHNGKTYYYNHNTKTSTWTDPRM 35 (37)
T ss_dssp CCSCTTEEEEECSSCCEEEEETTTTEEESSCTTT
T ss_pred CCCCCCcEEEECCCCCEEEEECCCCCeeeeCcCC
Confidence 4699999999999999999999999999999975
No 56
>2ysh_A GAS-7, growth-arrest-specific protein 7; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.09 E-value=1.5e-10 Score=71.12 Aligned_cols=37 Identities=27% Similarity=0.585 Sum_probs=33.5
Q ss_pred CCCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCC
Q psy8387 75 QQPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRI 111 (176)
Q Consensus 75 ~s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~ 111 (176)
+...+||+||+++.+.+|++||+|+.|++++|++|..
T Consensus 3 ~~~~~LP~gW~~~~d~~Gr~YY~n~~T~~t~We~P~~ 39 (40)
T 2ysh_A 3 SGSSGLPPGWQSYLSPQGRRYYVNTTTNETTWERPSS 39 (40)
T ss_dssp CCCSSCCTTCEEEECTTSCEEEECSSSCCEESSSCCC
T ss_pred CCCCCCCCCceEEECCCCCEEEEECCCCCEeCCCCCC
Confidence 3456799999999999999999999999999999974
No 57
>1wmv_A WWOX, WW domain containing oxidoreductase; all-beta, apoptosis; NMR {Homo sapiens}
Probab=99.07 E-value=1.5e-10 Score=76.06 Aligned_cols=38 Identities=37% Similarity=0.618 Sum_probs=34.5
Q ss_pred CCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCCCc
Q psy8387 77 PPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIPKE 114 (176)
Q Consensus 77 ~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~~~ 114 (176)
..+||+|||++++.+|++|||||.|++|+|++|+....
T Consensus 9 ~~~LP~GWe~~~~~~G~~Yyinh~tk~TtwedPr~~~~ 46 (54)
T 1wmv_A 9 AGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRLAFT 46 (54)
T ss_dssp SSCSCTTEEEEECTTSCEEEEESSSCCEESSCTTSSCC
T ss_pred CCCCCcCcEEEECCCCCEEEEeCCCCCEeecCCCCccc
Confidence 44699999999999999999999999999999997644
No 58
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=99.07 E-value=5.3e-11 Score=100.49 Aligned_cols=37 Identities=24% Similarity=0.526 Sum_probs=34.8
Q ss_pred CCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCcHH
Q psy8387 124 GNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLTPA 160 (176)
Q Consensus 124 ~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~~~ 160 (176)
.+||+|||++.+++|++|||||+|++|+|+||++...
T Consensus 10 ~~l~~~we~~~~~~~~~y~~~h~~~tt~w~~p~~~~~ 46 (261)
T 1eg3_A 10 TSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTEL 46 (261)
T ss_dssp TTCCTTEEEEECTTSCEEEEETTTTEEESSCHHHHHH
T ss_pred CCCCCCcceeECCCCCeEeecCCcccccCCCCchhhh
Confidence 6799999999999999999999999999999998763
No 59
>2dwv_A Salvador homolog 1 protein; WW domain, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.05 E-value=1.5e-10 Score=74.63 Aligned_cols=36 Identities=19% Similarity=0.378 Sum_probs=33.3
Q ss_pred CCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCC
Q psy8387 77 PPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIP 112 (176)
Q Consensus 77 ~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~ 112 (176)
..+||+|||++++.+|++|||||.|++|+|++|+..
T Consensus 11 ~~~LP~GWe~~~d~~g~~YYvnh~t~~T~We~P~~~ 46 (49)
T 2dwv_A 11 REGLPPGWERVESSEFGTYYVDHTNKRAQYRHPSGP 46 (49)
T ss_dssp SSCCCTTEEEEEETTTEEEEEETTTTEEESSCCCCC
T ss_pred CCCCCcCcEEEECCCCCEEEEECCCCCEeccCcCCC
Confidence 467999999999999999999999999999999854
No 60
>2yse_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI-1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=1.2e-10 Score=78.12 Aligned_cols=40 Identities=18% Similarity=0.327 Sum_probs=35.3
Q ss_pred CCCCCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCC
Q psy8387 73 LLQQPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIP 112 (176)
Q Consensus 73 a~~s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~ 112 (176)
...+..+||+|||++++..|++|||||.|++|+|++|+..
T Consensus 7 ~~d~~~~LP~GWE~~~d~~Gr~YYvnh~tk~T~We~P~~~ 46 (60)
T 2yse_A 7 GLDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLE 46 (60)
T ss_dssp CCCCCSSCCSSEEEEECSSSCEEEEETTTTEEESSCHHHH
T ss_pred ccCCCCCCCCCcEEEECCCCCEEEEeCCCCCeeccCCCch
Confidence 3445678999999999999999999999999999999753
No 61
>1ymz_A CC45; artificial protein, computational design, unknown function; NMR {Synthetic} SCOP: k.22.1.1
Probab=99.03 E-value=2.7e-10 Score=71.10 Aligned_cols=37 Identities=38% Similarity=0.769 Sum_probs=32.7
Q ss_pred CCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCC
Q psy8387 76 QPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIP 112 (176)
Q Consensus 76 s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~ 112 (176)
.+.+||+||+++.+.+|++||+|+.|++|+|++|+..
T Consensus 5 ~~~~LP~gW~~~~~~~Gr~YY~n~~T~~t~We~P~~~ 41 (43)
T 1ymz_A 5 RSMPLPPGWERRTDVEGKVYYFNVRTLTTTWERPTII 41 (43)
T ss_dssp --CCCCSSEEEEECTTSCEEEEETTTTEEESSCCCSC
T ss_pred cCCCCCCCCEEEECCCCCEEEEECCCCCCcccCCccc
Confidence 3567999999999999999999999999999999854
No 62
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=98.98 E-value=2.8e-10 Score=89.96 Aligned_cols=37 Identities=38% Similarity=0.798 Sum_probs=29.3
Q ss_pred ccCCCCCCceEEEc-CCCceEEeeCCCCeeeccCCCCc
Q psy8387 122 ELGNLPPGWEVRQT-ASGRYYYVDHNNRTTQFTDPRLT 158 (176)
Q Consensus 122 ~~~~LP~GWE~~~d-~~Gr~YYiNh~tr~TtWedPrl~ 158 (176)
+..+||+|||+++| ..|++||+||.|++|+|++|+..
T Consensus 6 ~~~~LP~gWe~~~~~~~g~~yy~n~~t~~t~We~P~~~ 43 (166)
T 3tc5_A 6 DEEKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGN 43 (166)
T ss_dssp ----CCTTEEEEECTTTCCEEEEETTTCCEESSCC---
T ss_pred CCCCCCCCceEEEcCCCCCEEEEECCCCCEEecCCCCC
Confidence 34679999999999 59999999999999999999864
No 63
>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}
Probab=98.98 E-value=1.3e-10 Score=103.88 Aligned_cols=39 Identities=54% Similarity=1.072 Sum_probs=36.0
Q ss_pred ccCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCcHH
Q psy8387 122 ELGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLTPA 160 (176)
Q Consensus 122 ~~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~~~ 160 (176)
+.++||+|||+++|++|++|||||+|++|+|+|||+...
T Consensus 5 ~~~~lP~gWe~~~~~~g~~y~i~h~~~~t~w~~Pr~~~~ 43 (429)
T 3olm_A 5 QLGPLPSGWEMRLTNTARVYFVDHNTKTTTWDDPRLPSS 43 (429)
T ss_dssp CCCCCCTTCCCCCSSCCCCCEEETTTTEEESSCTTSCCC
T ss_pred cCCCCCCCceeEECCCCCeEEEeCCCcceeccCCCCCcc
Confidence 457899999999999999999999999999999999753
No 64
>1jmq_A YAP65, 65 kDa YES-associated protein; polyproline ligand, YAP65 mutant, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1k9q_A* 1k9r_A 1k5r_A* 2lax_A* 2lay_A*
Probab=98.94 E-value=4.4e-10 Score=71.05 Aligned_cols=39 Identities=36% Similarity=0.689 Sum_probs=35.3
Q ss_pred CCCCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCC
Q psy8387 74 LQQPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIP 112 (176)
Q Consensus 74 ~~s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~ 112 (176)
.+...+||+||+++.+.+|+.||+||.|++|+|++|+..
T Consensus 3 ~P~~~~LP~GWe~~~~~~gr~y~~n~~t~~t~W~dPr~~ 41 (46)
T 1jmq_A 3 IPDDVPLPAGWEMAKTSSGQRYFKNHIDQTTTWQDPRKA 41 (46)
T ss_dssp CCSSCCCCTTBCCBCCSSCCCBEEETTTTEEESSCTTTS
T ss_pred CCCCCCCCcCcEEEEcCCCceEEEEecCCceeecCCCch
Confidence 356678999999999999999999999999999999854
No 65
>2ho2_A Fe65 protein, amyloid beta A4 protein-binding family B member 1; WW domain, beta sheet, Fe65, protein binding; 1.33A {Homo sapiens} SCOP: b.72.1.1 PDB: 2idh_A* 2oei_A
Probab=98.93 E-value=9.8e-10 Score=67.25 Aligned_cols=34 Identities=35% Similarity=0.876 Sum_probs=30.7
Q ss_pred CCCCCCcEEEECCCCceEeecCCCCeeeccCCCCC
Q psy8387 78 PDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIP 112 (176)
Q Consensus 78 ~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~ 112 (176)
.+||+||+++.+..| +||+|+.|++|+|++|...
T Consensus 2 ~~LP~GWe~~~d~~g-~YY~n~~t~~tqWe~P~~~ 35 (38)
T 2ho2_A 2 SDLPAGWMRVQDTSG-TYYWHIPTGTTQWEPPGRA 35 (38)
T ss_dssp CCSCTTEEEEECSSC-EEEEETTTTEEESSCCCC-
T ss_pred CcCCCCceEEEeCCC-CEEEecCCCCEeccCCCCC
Confidence 369999999999999 9999999999999999743
No 66
>2jx8_A Hpcif1, phosphorylated CTD-interacting factor 1; protein fragment, WW domain, triple-standed beta-sheet, alpha-helix, nucleus, phosphorylation; NMR {Homo sapiens}
Probab=98.90 E-value=4.6e-10 Score=73.16 Aligned_cols=34 Identities=24% Similarity=0.432 Sum_probs=31.4
Q ss_pred CCCCCceEEEcC-CCceEEeeCCCCeeeccCCCCc
Q psy8387 125 NLPPGWEVRQTA-SGRYYYVDHNNRTTQFTDPRLT 158 (176)
Q Consensus 125 ~LP~GWE~~~d~-~Gr~YYiNh~tr~TtWedPrl~ 158 (176)
.||.||+++++. .|+.||+|+.|++++||.|+..
T Consensus 10 ~LP~gW~~~~~~~~gr~YY~N~~T~~SqWe~P~~~ 44 (52)
T 2jx8_A 10 LVHAGWEKCWSRRENRPYYFNRFTNQSLWEMPVLG 44 (52)
T ss_dssp HHHHTCCEEEETTTTEEEEEETTTTEEESSCCCCT
T ss_pred CCCcCcEEEEccccCCEEEEECCCCCEEeCCCCCC
Confidence 489999999985 8999999999999999999865
No 67
>2ysc_A Amyloid beta A4 precursor protein-binding family B member 3; Fe65-like protein 2, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.89 E-value=1.5e-09 Score=66.80 Aligned_cols=34 Identities=29% Similarity=0.839 Sum_probs=30.7
Q ss_pred CCCCCCCCcEEEECCCCceEeecCCCCeeeccCCC
Q psy8387 76 QPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPR 110 (176)
Q Consensus 76 s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~ 110 (176)
...+||+||+++.+.+| .||+|+.|++++|++|.
T Consensus 5 ~~~~LP~GWe~~~~~~G-~YY~n~~t~~tqWe~P~ 38 (39)
T 2ysc_A 5 SSGGLPPGWRKIHDAAG-TYYWHVPSGSTQWQRPT 38 (39)
T ss_dssp CCCCCCTTEEEEEETTE-EEEEESSSCCEESSCCC
T ss_pred CCCCCCCCcEEEEcCCC-CEEEEcCCCCEeccCCC
Confidence 35679999999999889 59999999999999985
No 68
>3l4h_A E3 ubiquitin-protein ligase HECW1; E3 ligase, WW domain, UBL-conjugation pathway, structural GE structural genomics consortium, SGC, coiled coil; HET: MSE; 1.80A {Homo sapiens}
Probab=98.86 E-value=2.3e-09 Score=79.67 Aligned_cols=38 Identities=42% Similarity=0.779 Sum_probs=34.7
Q ss_pred CCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCCC
Q psy8387 76 QPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIPK 113 (176)
Q Consensus 76 s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~~ 113 (176)
...+||+|||++++.+|++||+||.|++|+|++|+.+.
T Consensus 69 ~~~pLP~GWE~r~d~~Gr~YfIdH~tktTtW~dPRl~~ 106 (109)
T 3l4h_A 69 TRLELPRGWEIKTDQQGKSFFVDHNSRATTFIDPRIPL 106 (109)
T ss_dssp TTSCCCTTEEEEECTTCCEEEEETTTTEEESSCSCCSC
T ss_pred CCCCCCCCCeEEECCCCCEEEEeCCCCCEeeCCCCccc
Confidence 35679999999999999999999999999999998653
No 69
>2jv4_A Peptidyl-prolyl CIS/trans isomerase; ppiase domain, WW domain group IV, rotamase; NMR {Emericella nidulans}
Probab=98.84 E-value=3.2e-09 Score=69.60 Aligned_cols=36 Identities=28% Similarity=0.636 Sum_probs=32.4
Q ss_pred CCCCCCCcEEEECC-CCceEeecCCCCeeeccCCCCC
Q psy8387 77 PPDLPHGYEIRTTQ-QGQVYFYHLPTGVSTWHDPRIP 112 (176)
Q Consensus 77 ~~~LP~gWe~~~~~-~GrvYY~nh~TrtTsW~~P~~~ 112 (176)
...||+||+.+.+. .|++||+|+.|++++|++|...
T Consensus 5 ~~~LP~GW~~~~~~~~Gr~YY~N~~T~~sqWe~P~~~ 41 (54)
T 2jv4_A 5 NTGLPAGWEVRHSNSKNLPYYFNPATRESRWEPPADT 41 (54)
T ss_dssp CCCCCSSCCEEECSSSSCEEEEETTTTEEESSCCTTS
T ss_pred CCCCCCCcEEEEECCCCCEEEEECCCCcEEecCCCCc
Confidence 46699999999985 8999999999999999999754
No 70
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=98.78 E-value=4.2e-09 Score=75.67 Aligned_cols=36 Identities=17% Similarity=0.452 Sum_probs=33.2
Q ss_pred cCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCCc
Q psy8387 123 LGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRLT 158 (176)
Q Consensus 123 ~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~ 158 (176)
..+||.||+++++++|++||+|+.|++|+|++|+..
T Consensus 9 ~~~lp~~W~e~~~~~Gr~YYyN~~T~~s~We~P~~~ 44 (92)
T 2l5f_A 9 ASGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDL 44 (92)
T ss_dssp TTBTTTTEEEEECTTSCEEEEETTTTEEESSCSGGG
T ss_pred CCCCCCCcEEEEcCCCCEEEEECCCCceecccCccc
Confidence 356999999999999999999999999999999864
No 71
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=98.75 E-value=1.1e-08 Score=63.07 Aligned_cols=33 Identities=24% Similarity=0.548 Sum_probs=31.1
Q ss_pred CCCCCCceEEEcCCCceEEeeCCCCeeeccCCC
Q psy8387 124 GNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPR 156 (176)
Q Consensus 124 ~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPr 156 (176)
.++|.+|++..+++|+.||+|..|++++|+.|.
T Consensus 6 ~~~~~~W~e~~~~~G~~YYyN~~T~eS~We~P~ 38 (40)
T 2ysi_A 6 SGTEEIWVENKTPDGKVYYYNARTRESAWTKPD 38 (40)
T ss_dssp CCCCCSEEEEECTTSCEEEEETTTCCEESSCCS
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCEEeCCCC
Confidence 468999999999999999999999999999996
No 72
>2e45_A Fe65 protein, amyloid beta A4 precursor protein-binding family B member 1; triple-stranded beta-sheet; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.69 E-value=1.3e-08 Score=66.72 Aligned_cols=38 Identities=32% Similarity=0.797 Sum_probs=34.3
Q ss_pred CCCCCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCC
Q psy8387 73 LLQQPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRI 111 (176)
Q Consensus 73 a~~s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~ 111 (176)
+.....+||+||+++.+..| .||+|+.|++|+|++|..
T Consensus 13 ~~~~~~~LPpGW~~~~D~sG-tYY~h~~T~tTQWerP~~ 50 (55)
T 2e45_A 13 AFETDSDLPAGWMRVQDTSG-TYYWHIPTGTTQWEPPGR 50 (55)
T ss_dssp TTCSCSCCCTTEEEEEETTE-EEEEETTTCCEESSCCCC
T ss_pred cccCCCCCCCCCeEeecCCC-CEEEEcCCCCCccCCCCC
Confidence 55667789999999999999 999999999999999963
No 73
>1ywi_A Formin-binding protein 3; WW domain, class II, proline-rich peptides, protein-protein interactions, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1ywj_A 1zr7_A 2dyf_A
Probab=98.67 E-value=1.7e-08 Score=62.55 Aligned_cols=33 Identities=21% Similarity=0.626 Sum_probs=27.5
Q ss_pred CCCCCCceEEEcCCCceEEeeCCCCeeeccCCC
Q psy8387 124 GNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPR 156 (176)
Q Consensus 124 ~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPr 156 (176)
+.+|.+|++..+++|+.||+|..|++++|+.|.
T Consensus 8 ~~~~~~W~e~~~~~G~~YYyN~~T~eS~We~P~ 40 (41)
T 1ywi_A 8 GSAKSMWTEHKSPDGRTYYYNTETKQSTWEKPD 40 (41)
T ss_dssp ----CCEEEEEETTTEEEEEETTTTEEEESCC-
T ss_pred CCCCCCcEEEECCCCCEEEEECCCCCEEeCCCC
Confidence 457899999999999999999999999999995
No 74
>1e0l_A Formin binding protein; SH3 domain, WW domain, FBP28, signal transduction; NMR {Mus musculus} SCOP: b.72.1.1 PDB: 2jup_W 2rly_W 2rm0_W 2nnt_A
Probab=98.61 E-value=5.5e-08 Score=58.86 Aligned_cols=32 Identities=22% Similarity=0.516 Sum_probs=29.5
Q ss_pred CCCCceEEEcCCCceEEeeCCCCeeeccCCCC
Q psy8387 126 LPPGWEVRQTASGRYYYVDHNNRTTQFTDPRL 157 (176)
Q Consensus 126 LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl 157 (176)
...+|++..+++|++||+|..|++++|+.|.-
T Consensus 4 ~~~~W~e~~~~~G~~YYyN~~T~es~We~P~~ 35 (37)
T 1e0l_A 4 AVSEWTEYKTADGKTYYYNNRTLESTWEKPQE 35 (37)
T ss_dssp SSCSCEEEECTTSCEEEEETTTTEEESSCCSS
T ss_pred CCCCeEEEECCCCCEEEEECCCCCEEecCCCc
Confidence 56789999999999999999999999999963
No 75
>1o6w_A PRP40, PRE-mRNA processing protein PRP40; WW domain PAIR, nuclear protein, mRNA splicing, ribonucleoprotein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1 b.72.1.1
Probab=98.57 E-value=3.6e-08 Score=67.83 Aligned_cols=31 Identities=26% Similarity=0.580 Sum_probs=29.0
Q ss_pred CCceEEEcCCCceEEeeCCCCeeeccCCCCc
Q psy8387 128 PGWEVRQTASGRYYYVDHNNRTTQFTDPRLT 158 (176)
Q Consensus 128 ~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~ 158 (176)
+||+++.|++|++||+||.|++|+|++|+..
T Consensus 2 ~~W~~~~~~~Gr~YY~n~~T~~s~W~~P~~~ 32 (75)
T 1o6w_A 2 SIWKEAKDASGRIYYYNTLTKKSTWEKPKEL 32 (75)
T ss_dssp CCEEEEECTTCCEEEEETTTTEEESSCCHHH
T ss_pred CCCeEEECCCCCeEEEECCCCCEEeecchhh
Confidence 5899999999999999999999999999754
No 76
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=98.46 E-value=9.7e-08 Score=75.26 Aligned_cols=37 Identities=30% Similarity=0.644 Sum_probs=29.2
Q ss_pred CCCCCCCCcEEEEC-CCCceEeecCCCCeeeccCCCCC
Q psy8387 76 QPPDLPHGYEIRTT-QQGQVYFYHLPTGVSTWHDPRIP 112 (176)
Q Consensus 76 s~~~LP~gWe~~~~-~~GrvYY~nh~TrtTsW~~P~~~ 112 (176)
...+||+||+.+++ ..|++||+|+.|++|+|++|+..
T Consensus 6 ~~~~LP~gWe~~~~~~~g~~yy~n~~t~~t~We~P~~~ 43 (166)
T 3tc5_A 6 DEEKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGN 43 (166)
T ss_dssp ----CCTTEEEEECTTTCCEEEEETTTCCEESSCC---
T ss_pred CCCCCCCCceEEEcCCCCCEEEEECCCCCEEecCCCCC
Confidence 45679999999999 59999999999999999999754
No 77
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=98.44 E-value=7e-08 Score=81.36 Aligned_cols=34 Identities=15% Similarity=0.415 Sum_probs=32.4
Q ss_pred CCCCCCcEEEECCCCceEeecCCCCeeeccCCCC
Q psy8387 78 PDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRI 111 (176)
Q Consensus 78 ~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~ 111 (176)
++||+|||++++.+|++||+||.|++|+|.||+.
T Consensus 10 ~~l~~~we~~~~~~~~~y~~~h~~~tt~w~~p~~ 43 (261)
T 1eg3_A 10 TSVQGPWERAISPNKVPYYINHETQTTCWDHPKM 43 (261)
T ss_dssp TTCCTTEEEEECTTSCEEEEETTTTEEESSCHHH
T ss_pred CCCCCCcceeECCCCCeEeecCCcccccCCCCch
Confidence 6799999999999999999999999999999984
No 78
>2jx8_A Hpcif1, phosphorylated CTD-interacting factor 1; protein fragment, WW domain, triple-standed beta-sheet, alpha-helix, nucleus, phosphorylation; NMR {Homo sapiens}
Probab=98.42 E-value=5.7e-08 Score=63.15 Aligned_cols=35 Identities=20% Similarity=0.388 Sum_probs=31.7
Q ss_pred CCCCCCcEEEEC-CCCceEeecCCCCeeeccCCCCC
Q psy8387 78 PDLPHGYEIRTT-QQGQVYFYHLPTGVSTWHDPRIP 112 (176)
Q Consensus 78 ~~LP~gWe~~~~-~~GrvYY~nh~TrtTsW~~P~~~ 112 (176)
..||.||+.+++ ..|+.||+|+.|++++|++|...
T Consensus 9 ~~LP~gW~~~~~~~~gr~YY~N~~T~~SqWe~P~~~ 44 (52)
T 2jx8_A 9 ELVHAGWEKCWSRRENRPYYFNRFTNQSLWEMPVLG 44 (52)
T ss_dssp HHHHHTCCEEEETTTTEEEEEETTTTEEESSCCCCT
T ss_pred CCCCcCcEEEEccccCCEEEEECCCCCEEeCCCCCC
Confidence 458999999998 58999999999999999999865
No 79
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=98.41 E-value=2.5e-07 Score=52.46 Aligned_cols=27 Identities=33% Similarity=0.677 Sum_probs=24.1
Q ss_pred CCceEEEcCCCceEEeeCCCCeeeccCC
Q psy8387 128 PGWEVRQTASGRYYYVDHNNRTTQFTDP 155 (176)
Q Consensus 128 ~GWE~~~d~~Gr~YYiNh~tr~TtWedP 155 (176)
+||| .....|+.||+|..|++++|+.|
T Consensus 1 ~gWe-~~~~~g~~YYyN~~T~~s~We~P 27 (27)
T 1e0n_A 1 PGWE-IIHENGRPLYYNAEQKTKLHYPP 27 (27)
T ss_dssp CCEE-EEESSSSEEEEETTTTEEESSCC
T ss_pred CCCe-EECCCCCeEEEECCCCCEeccCC
Confidence 5899 55569999999999999999987
No 80
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=98.38 E-value=5.4e-07 Score=55.39 Aligned_cols=34 Identities=26% Similarity=0.477 Sum_probs=30.9
Q ss_pred CCCCCCcEEEECCCCceEeecCCCCeeeccCCCC
Q psy8387 78 PDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRI 111 (176)
Q Consensus 78 ~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~ 111 (176)
.++|.+|++..+.+|+.||+|..|++++|++|..
T Consensus 6 ~~~~~~W~e~~~~~G~~YYyN~~T~eS~We~P~~ 39 (40)
T 2ysi_A 6 SGTEEIWVENKTPDGKVYYYNARTRESAWTKPDG 39 (40)
T ss_dssp CCCCCSEEEEECTTSCEEEEETTTCCEESSCCSC
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCEEeCCCCC
Confidence 4578899999999999999999999999999963
No 81
>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}
Probab=98.36 E-value=1.5e-07 Score=84.04 Aligned_cols=38 Identities=45% Similarity=0.851 Sum_probs=35.0
Q ss_pred CCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCCCC
Q psy8387 76 QPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRIPK 113 (176)
Q Consensus 76 s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~~ 113 (176)
..++||+|||++++++|++||+||.|++|+|++|+.+.
T Consensus 5 ~~~~lP~gWe~~~~~~g~~y~i~h~~~~t~w~~Pr~~~ 42 (429)
T 3olm_A 5 QLGPLPSGWEMRLTNTARVYFVDHNTKTTTWDDPRLPS 42 (429)
T ss_dssp CCCCCCTTCCCCCSSCCCCCEEETTTTEEESSCTTSCC
T ss_pred cCCCCCCCceeEECCCCCeEEEeCCCcceeccCCCCCc
Confidence 44779999999999999999999999999999999764
No 82
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=98.36 E-value=3.9e-07 Score=62.85 Aligned_cols=31 Identities=26% Similarity=0.404 Sum_probs=29.0
Q ss_pred CCCceEEEcCCCceEEeeCCCCeeeccCCCC
Q psy8387 127 PPGWEVRQTASGRYYYVDHNNRTTQFTDPRL 157 (176)
Q Consensus 127 P~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl 157 (176)
-.||+++.+++|++||+|+.|++|+|++|+.
T Consensus 4 ~~~W~e~~~~~G~~YYyN~~T~~s~We~P~~ 34 (75)
T 2jxw_A 4 KGRWVEGITSEGYHYYYDLISGASQWEKPEG 34 (75)
T ss_dssp CCCEEEEEETTTEEEEEETTTTEEECSCCSS
T ss_pred CCCcEEEECCCCCEEEEECCCCCEeecCCCc
Confidence 3689999999999999999999999999975
No 83
>1ywi_A Formin-binding protein 3; WW domain, class II, proline-rich peptides, protein-protein interactions, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1ywj_A 1zr7_A 2dyf_A
Probab=98.29 E-value=4.6e-07 Score=55.98 Aligned_cols=34 Identities=24% Similarity=0.501 Sum_probs=27.2
Q ss_pred CCCCCCCcEEEECCCCceEeecCCCCeeeccCCC
Q psy8387 77 PPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPR 110 (176)
Q Consensus 77 ~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~ 110 (176)
.+.+|.+|++..+.+|+.||+|..|++++|++|.
T Consensus 7 ~~~~~~~W~e~~~~~G~~YYyN~~T~eS~We~P~ 40 (41)
T 1ywi_A 7 VGSAKSMWTEHKSPDGRTYYYNTETKQSTWEKPD 40 (41)
T ss_dssp -----CCEEEEEETTTEEEEEETTTTEEEESCC-
T ss_pred CCCCCCCcEEEECCCCCEEEEECCCCCEEeCCCC
Confidence 3456889999999999999999999999999985
No 84
>1e0l_A Formin binding protein; SH3 domain, WW domain, FBP28, signal transduction; NMR {Mus musculus} SCOP: b.72.1.1 PDB: 2jup_W 2rly_W 2rm0_W 2nnt_A
Probab=98.28 E-value=1.1e-06 Score=53.06 Aligned_cols=33 Identities=27% Similarity=0.479 Sum_probs=29.7
Q ss_pred CCCCCcEEEECCCCceEeecCCCCeeeccCCCC
Q psy8387 79 DLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRI 111 (176)
Q Consensus 79 ~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~ 111 (176)
....+|+++.+.+|+.||+|..|++++|++|..
T Consensus 3 ~~~~~W~e~~~~~G~~YYyN~~T~es~We~P~~ 35 (37)
T 1e0l_A 3 TAVSEWTEYKTADGKTYYYNNRTLESTWEKPQE 35 (37)
T ss_dssp SSSCSCEEEECTTSCEEEEETTTTEEESSCCSS
T ss_pred CCCCCeEEEECCCCCEEEEECCCCCEEecCCCc
Confidence 346789999999999999999999999999974
No 85
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=97.96 E-value=5.7e-06 Score=46.76 Aligned_cols=27 Identities=19% Similarity=0.404 Sum_probs=23.7
Q ss_pred CCcEEEECCCCceEeecCCCCeeeccCC
Q psy8387 82 HGYEIRTTQQGQVYFYHLPTGVSTWHDP 109 (176)
Q Consensus 82 ~gWe~~~~~~GrvYY~nh~TrtTsW~~P 109 (176)
+||+ .....|+.||+|..|++++|+.|
T Consensus 1 ~gWe-~~~~~g~~YYyN~~T~~s~We~P 27 (27)
T 1e0n_A 1 PGWE-IIHENGRPLYYNAEQKTKLHYPP 27 (27)
T ss_dssp CCEE-EEESSSSEEEEETTTTEEESSCC
T ss_pred CCCe-EECCCCCeEEEECCCCCEeccCC
Confidence 5899 44579999999999999999877
No 86
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.76 E-value=2.1e-05 Score=54.33 Aligned_cols=30 Identities=20% Similarity=0.390 Sum_probs=27.8
Q ss_pred CceEEEcCCCceEEeeCCCCeeeccCCCCc
Q psy8387 129 GWEVRQTASGRYYYVDHNNRTTQFTDPRLT 158 (176)
Q Consensus 129 GWE~~~d~~Gr~YYiNh~tr~TtWedPrl~ 158 (176)
.|-+..+.+||+||+|..|+++.|+.|.--
T Consensus 21 ~W~~v~T~dGR~fyyN~~Tk~S~WekP~eL 50 (73)
T 2dk7_A 21 PWCVVWTGDERVFFYNPTTRLSMWDRPDDL 50 (73)
T ss_dssp SCEEEEESSSCEEEEETTTTEECSSCCTTT
T ss_pred CcEEEECCCCCEEEecCcccceeccCChHh
Confidence 499999999999999999999999999653
No 87
>2dk1_A WW domain-binding protein 4; WBP-4, formin- binding protein 21, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=97.68 E-value=1.9e-05 Score=50.82 Aligned_cols=29 Identities=28% Similarity=0.457 Sum_probs=27.2
Q ss_pred CceEEEcCCCceEEeeCCCCeeeccCCCC
Q psy8387 129 GWEVRQTASGRYYYVDHNNRTTQFTDPRL 157 (176)
Q Consensus 129 GWE~~~d~~Gr~YYiNh~tr~TtWedPrl 157 (176)
.|.+..+++|+.||+|..|++++|+.|.-
T Consensus 8 ~W~e~~s~~G~~YYyN~~T~eS~WekP~~ 36 (50)
T 2dk1_A 8 RWVEGITSEGYHYYYDLISGASQWEKPEG 36 (50)
T ss_dssp CEEECCCSTTCCCEEESSSCCEESSCCTT
T ss_pred CeEEEECCCCCEEEEECCCCCEEeeCChh
Confidence 59999999999999999999999999964
No 88
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.45 E-value=9.2e-05 Score=51.10 Aligned_cols=32 Identities=25% Similarity=0.418 Sum_probs=29.5
Q ss_pred CcEEEECCCCceEeecCCCCeeeccCCCCCCc
Q psy8387 83 GYEIRTTQQGQVYFYHLPTGVSTWHDPRIPKE 114 (176)
Q Consensus 83 gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~~~ 114 (176)
.|....+.+||+||||..|+++.|+.|.....
T Consensus 21 ~W~~v~T~dGR~fyyN~~Tk~S~WekP~eLk~ 52 (73)
T 2dk7_A 21 PWCVVWTGDERVFFYNPTTRLSMWDRPDDLIG 52 (73)
T ss_dssp SCEEEEESSSCEEEEETTTTEECSSCCTTTTT
T ss_pred CcEEEECCCCCEEEecCcccceeccCChHhcC
Confidence 59999999999999999999999999987654
No 89
>2dk1_A WW domain-binding protein 4; WBP-4, formin- binding protein 21, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=97.20 E-value=0.00021 Score=45.85 Aligned_cols=31 Identities=29% Similarity=0.544 Sum_probs=28.3
Q ss_pred CCcEEEECCCCceEeecCCCCeeeccCCCCC
Q psy8387 82 HGYEIRTTQQGQVYFYHLPTGVSTWHDPRIP 112 (176)
Q Consensus 82 ~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~~ 112 (176)
..|.+..+.+|+.||+|..|++++|+.|...
T Consensus 7 ~~W~e~~s~~G~~YYyN~~T~eS~WekP~~~ 37 (50)
T 2dk1_A 7 GRWVEGITSEGYHYYYDLISGASQWEKPEGF 37 (50)
T ss_dssp CCEEECCCSTTCCCEEESSSCCEESSCCTTC
T ss_pred CCeEEEECCCCCEEEEECCCCCEEeeCChhh
Confidence 3699999999999999999999999999755
No 90
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=96.79 E-value=0.0015 Score=51.34 Aligned_cols=37 Identities=27% Similarity=0.559 Sum_probs=32.1
Q ss_pred CCCCCCCCCcEEEEC-CCCceEeecCCCCeeeccCCCC
Q psy8387 75 QQPPDLPHGYEIRTT-QQGQVYFYHLPTGVSTWHDPRI 111 (176)
Q Consensus 75 ~s~~~LP~gWe~~~~-~~GrvYY~nh~TrtTsW~~P~~ 111 (176)
+....||+||+.+.+ ..|+.||+|..|+..+|..|..
T Consensus 3 ~~~~~lp~~w~~~~s~s~~~~Yy~~~~~~~~~~~~~~~ 40 (177)
T 1yw5_A 3 STSTGLPPNWTIRVSRSHNKEYFLNQSTNESSWDPPYG 40 (177)
T ss_dssp CCCCCCCTTEEEEECSSTTCEEEEETTTCCEESSCCTT
T ss_pred CccCCCCchHHHHhcccCCchhhhhHHHhhHhhcCccc
Confidence 344669999999998 5799999999999999998864
No 91
>3le4_A Microprocessor complex subunit DGCR8; WW motif, dimerization, 3D domain swapping, heme binding, MI processing, heme, iron, metal-binding, nucleus; 1.70A {Homo sapiens}
Probab=95.76 E-value=0.015 Score=40.06 Aligned_cols=37 Identities=24% Similarity=0.506 Sum_probs=33.5
Q ss_pred hccCCCCCCceEEEcCCCceEEeeCCCCeeeccCCCC
Q psy8387 121 TELGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPRL 157 (176)
Q Consensus 121 ~~~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPrl 157 (176)
....+||.||-+....+|-.-|+...|+..+|..|=+
T Consensus 24 ~~~~~LPeGW~~v~H~SGmP~YlH~~trV~T~SrPY~ 60 (79)
T 3le4_A 24 PPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYF 60 (79)
T ss_dssp CCCCCCCTTEEEEECTTSSEEEEETTTTEEESSCCCC
T ss_pred CcCCcCCCccEEEEecCCceEEEeccceEEeccCCeE
Confidence 3456899999999999999999999999999999965
No 92
>3le4_A Microprocessor complex subunit DGCR8; WW motif, dimerization, 3D domain swapping, heme binding, MI processing, heme, iron, metal-binding, nucleus; 1.70A {Homo sapiens}
Probab=93.97 E-value=0.085 Score=36.35 Aligned_cols=39 Identities=23% Similarity=0.421 Sum_probs=33.6
Q ss_pred CCCCCCCCCCCcEEEECCCCceEeecCCCCeeeccCCCC
Q psy8387 73 LLQQPPDLPHGYEIRTTQQGQVYFYHLPTGVSTWHDPRI 111 (176)
Q Consensus 73 a~~s~~~LP~gWe~~~~~~GrvYY~nh~TrtTsW~~P~~ 111 (176)
......+||.||.+..-.+|-..|++..|+..+|.+|=.
T Consensus 22 g~~~~~~LPeGW~~v~H~SGmP~YlH~~trV~T~SrPY~ 60 (79)
T 3le4_A 22 GRPPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYF 60 (79)
T ss_dssp --CCCCCCCTTEEEEECTTSSEEEEETTTTEEESSCCCC
T ss_pred CCCcCCcCCCccEEEEecCCceEEEeccceEEeccCCeE
Confidence 556678899999998888999999999999999998854
No 93
>2ky8_A Methyl-CPG-binding domain protein 2; DNA binding domain, transcription-DNA complex; HET: DNA 5CM TED; NMR {Gallus gallus}
Probab=74.34 E-value=2.7 Score=28.27 Aligned_cols=27 Identities=33% Similarity=0.732 Sum_probs=18.2
Q ss_pred CCCCCCceEEEc--CCC------ceEEeeCCCCeee
Q psy8387 124 GNLPPGWEVRQT--ASG------RYYYVDHNNRTTQ 151 (176)
Q Consensus 124 ~~LP~GWE~~~d--~~G------r~YYiNh~tr~Tt 151 (176)
.+||.||+..+- ..| .+||+.+ ++.--
T Consensus 11 p~Lp~GW~R~~~~R~~g~s~~k~DvyY~sP-~Gkr~ 45 (72)
T 2ky8_A 11 PALPPGWKKEEVIRKSGLSAGKSDVYYFSP-SGKKF 45 (72)
T ss_dssp SSSCTTCEEEEEECCSSTTTTCEEEEEECT-TCCEE
T ss_pred CCCCCCCEEEEEEecCCCCCCceEEEEECC-CCCEe
Confidence 469999977764 233 4899988 44433
No 94
>1d9n_A Methyl-CPG-binding protein MBD1; PCM1, methylation, DNA binding domain, gene regulation; NMR {Homo sapiens} SCOP: d.10.1.3 PDB: 1ig4_A*
Probab=71.87 E-value=4.4 Score=27.53 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=22.8
Q ss_pred CCCCCCceEEEcC--------CCceEEeeCCCCeeeccCCCCcH
Q psy8387 124 GNLPPGWEVRQTA--------SGRYYYVDHNNRTTQFTDPRLTP 159 (176)
Q Consensus 124 ~~LP~GWE~~~d~--------~Gr~YYiNh~tr~TtWedPrl~~ 159 (176)
..||.||+..+-. ..-+||+.. ++..--..+.+..
T Consensus 9 p~LP~GW~Re~~~R~~g~s~gk~DvyY~sP-~Gkk~RS~~ev~r 51 (75)
T 1d9n_A 9 PALGPGWKRREVFRKSGATCGRSDTYYQSP-TGDRIRSKVELTR 51 (75)
T ss_dssp TTTCSSCEEEECSSSSSCTTCCCCEEEECS-SSCEECSTHHHHH
T ss_pred CCCCCCCEEEEEEecCCCCCCceEEEEECC-CCCeeecHHHHHH
Confidence 4699999877642 235899998 5655544444433
No 95
>3c2i_A Methyl-CPG-binding protein 2; water mediated recognition; HET: DNA 5CM; 2.50A {Homo sapiens} PDB: 1qk9_A
Probab=68.62 E-value=4.4 Score=28.97 Aligned_cols=38 Identities=21% Similarity=0.351 Sum_probs=23.9
Q ss_pred cCCCCCCceEEEc--CCC------ceEEeeCCCCeeeccCCCCcHHH
Q psy8387 123 LGNLPPGWEVRQT--ASG------RYYYVDHNNRTTQFTDPRLTPAI 161 (176)
Q Consensus 123 ~~~LP~GWE~~~d--~~G------r~YYiNh~tr~TtWedPrl~~~~ 161 (176)
...||+||+..+- .+| .+|||.. ++..--..+.+..-|
T Consensus 21 ~~~lP~GW~re~~~R~~G~s~gk~DvYY~sP-~GkkfRSk~ev~ryL 66 (97)
T 3c2i_A 21 DPTLPEGWTRKLKQRKSGRSAGKYDVYLINP-QGKAFRSKVELIMYF 66 (97)
T ss_dssp CTTSCTTCEEEEEECCSSTTTTCEEEEEECT-TSCEECSHHHHHHHH
T ss_pred CCCCCCCCEEEEEEecCCCCCCcceEEEECC-CCCEEECHHHHHHHH
Confidence 3569999976653 232 5899998 566554444444333
No 96
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=66.43 E-value=3.8 Score=31.50 Aligned_cols=22 Identities=9% Similarity=0.410 Sum_probs=19.6
Q ss_pred CCCceEEeeCCCCeeeccCCCC
Q psy8387 136 ASGRYYYVDHNNRTTQFTDPRL 157 (176)
Q Consensus 136 ~~Gr~YYiNh~tr~TtWedPrl 157 (176)
..|+.||+|..++..+|+.|.-
T Consensus 19 s~~~~Yy~~~~~~~~~~~~~~~ 40 (177)
T 1yw5_A 19 SHNKEYFLNQSTNESSWDPPYG 40 (177)
T ss_dssp STTCEEEEETTTCCEESSCCTT
T ss_pred cCCchhhhhHHHhhHhhcCccc
Confidence 4799999999999999999843
No 97
>3vxv_A Methyl-CPG-binding domain protein 4; methyl CPG binding domain, protein-DNA complex, versatIle BA recognition, hydrolase-DNA complex; HET: DNA 5CM; 2.00A {Mus musculus} PDB: 3vxx_A* 3vyb_A* 3vyq_A*
Probab=65.87 E-value=4.9 Score=26.81 Aligned_cols=23 Identities=30% Similarity=0.676 Sum_probs=16.3
Q ss_pred CCCCCCceEEEcC--CC------ceEEeeCC
Q psy8387 124 GNLPPGWEVRQTA--SG------RYYYVDHN 146 (176)
Q Consensus 124 ~~LP~GWE~~~d~--~G------r~YYiNh~ 146 (176)
.+||.||+..+-. .| .+||+...
T Consensus 4 ~plp~GW~R~~~~R~~G~s~gk~DvyY~sP~ 34 (69)
T 3vxv_A 4 KPVPCGWERVVKQRLSGKTAGKFDVYFISPQ 34 (69)
T ss_dssp CCSCTTCEEEEEECCSSTTTTCEEEEEECTT
T ss_pred CcCCCCCEEEEEEeccCCCCCcceEEEEcCC
Confidence 4799999776532 23 48999876
No 98
>1ub1_A MECP2, attachment region binding protein; chicken methyl-CPG-binding protein 2 (cmecp2), MAR-binding protein (ARBP), spectroscopy; NMR {Gallus gallus} SCOP: d.10.1.3
Probab=55.21 E-value=8.4 Score=29.02 Aligned_cols=34 Identities=24% Similarity=0.433 Sum_probs=21.4
Q ss_pred cCCCCCCceEEEc--CCC------ceEEeeCCCCeeeccCCCC
Q psy8387 123 LGNLPPGWEVRQT--ASG------RYYYVDHNNRTTQFTDPRL 157 (176)
Q Consensus 123 ~~~LP~GWE~~~d--~~G------r~YYiNh~tr~TtWedPrl 157 (176)
...||.||+..+- .+| .+|||... +..--..+.+
T Consensus 35 ~~~LP~GWkRe~~~RksG~Sagk~DVYY~SP~-GKkfRSk~Ev 76 (133)
T 1ub1_A 35 DPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQ-GKAFRSKVEL 76 (133)
T ss_dssp CCCBTTBCEEEEEECCCSSSCCSEEEEEECTT-SCEESSHHHH
T ss_pred CCCCCCCCEEEEEEecCCCCCCceeEEEECCC-CCeeeCHHHH
Confidence 4569999976653 233 48999885 5544444443
No 99
>1ub1_A MECP2, attachment region binding protein; chicken methyl-CPG-binding protein 2 (cmecp2), MAR-binding protein (ARBP), spectroscopy; NMR {Gallus gallus} SCOP: d.10.1.3
Probab=46.76 E-value=44 Score=25.02 Aligned_cols=29 Identities=24% Similarity=0.548 Sum_probs=19.7
Q ss_pred CCCCCCCCCCCcEEEEC--CCC------ceEeecCCC
Q psy8387 73 LLQQPPDLPHGYEIRTT--QQG------QVYFYHLPT 101 (176)
Q Consensus 73 a~~s~~~LP~gWe~~~~--~~G------rvYY~nh~T 101 (176)
....+..||.||+..+. ..| .+|||...-
T Consensus 31 ~~~~~~~LP~GWkRe~~~RksG~Sagk~DVYY~SP~G 67 (133)
T 1ub1_A 31 PMYDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQG 67 (133)
T ss_dssp CSSCCCCBTTBCEEEEEECCCSSSCCSEEEEEECTTS
T ss_pred cccCCCCCCCCCEEEEEEecCCCCCCceeEEEECCCC
Confidence 44566779999966553 333 589999753
No 100
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=23.54 E-value=1.2e+02 Score=25.57 Aligned_cols=62 Identities=10% Similarity=0.037 Sum_probs=39.1
Q ss_pred CCCCceEeecCCCCeeeccCCCCCCcCCccchhccCCCC-CCceEEE--cCCCceEEeeCCCCeeec
Q psy8387 89 TQQGQVYFYHLPTGVSTWHDPRIPKELRPEQATELGNLP-PGWEVRQ--TASGRYYYVDHNNRTTQF 152 (176)
Q Consensus 89 ~~~GrvYY~nh~TrtTsW~~P~~~~~~~~~~~~~~~~LP-~GWE~~~--d~~Gr~YYiNh~tr~TtW 152 (176)
+.+|.+|-+|..|++.-|.-... ........ .....+ .|..... ..+|++|.++..++...|
T Consensus 17 t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~-~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~ 81 (339)
T 2be1_A 17 DVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEI-QEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL 81 (339)
T ss_dssp ETTSCEEEEETTTTEEEEEECGG-GSCCSEEC-CCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE
T ss_pred eCCCeEEEEECCCCcEEEEecCC-ccCCcEEe-cCCccccCCcEEEEEECCCCEEEEEECCCCcEEe
Confidence 57999999999999999975442 00000000 001111 2344444 469999999999887777
No 101
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=22.14 E-value=1.2e+02 Score=23.99 Aligned_cols=23 Identities=4% Similarity=0.067 Sum_probs=18.3
Q ss_pred EEcCCCceEEeeCCCCeeeccCC
Q psy8387 133 RQTASGRYYYVDHNNRTTQFTDP 155 (176)
Q Consensus 133 ~~d~~Gr~YYiNh~tr~TtWedP 155 (176)
..+.+|.+|.+|..+++..|..+
T Consensus 323 v~~~~g~l~~~d~~tG~~~~~~~ 345 (376)
T 3q7m_A 323 VGDSEGYLHWINVEDGRFVAQQK 345 (376)
T ss_dssp EECTTSEEEEEETTTCCEEEEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEEe
Confidence 34668889999999999888654
No 102
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=21.07 E-value=1e+02 Score=24.50 Aligned_cols=61 Identities=16% Similarity=0.321 Sum_probs=38.7
Q ss_pred CCCceEeecCCCCeeeccCCCCCCcCCccchhccCCCCCCceEEEcCCCceEEeeCCCCeeeccCCC
Q psy8387 90 QQGQVYFYHLPTGVSTWHDPRIPKELRPEQATELGNLPPGWEVRQTASGRYYYVDHNNRTTQFTDPR 156 (176)
Q Consensus 90 ~~GrvYY~nh~TrtTsW~~P~~~~~~~~~~~~~~~~LP~GWE~~~d~~Gr~YYiNh~tr~TtWedPr 156 (176)
.+|.+|-++..|+...|..+........ .. +..|--..-+.+|.+|.+|..+++..|....
T Consensus 111 ~~g~l~a~d~~tG~~~W~~~~~~~~~~~-p~-----~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 111 EKAQVYALNTSDGTVAWQTKVAGEALSR-PV-----VSDGLVLIHTSNGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSCCCSC-CE-----EETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCCEEEEEECCCCCEEEEEeCCCceEcC-CE-----EECCEEEEEcCCCeEEEEECCCCcEEEEEeC
Confidence 4678888999999988965542211100 00 1123222335688999999999999996544
Done!