RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy8390
         (422 letters)



>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4
           {Homo sapiens [TaxId: 9606]}
          Length = 51

 Score = 78.0 bits (192), Expect = 4e-19
 Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 15/66 (22%)

Query: 339 EPRYCRCNEQAHYNFYTIFCSQVAFGVMVACDSKNCPYEWYHCECVGIAPDNPPKGKWYC 398
           EP YC              C QV++G M+ CD+ +C  EW+H  CVG+     P+GKW+C
Sbjct: 1   EPTYC-------------LCHQVSYGEMIGCDNPDCSIEWFHFACVGL--TTKPRGKWFC 45

Query: 399 PLCLEK 404
           P C ++
Sbjct: 46  PRCSQE 51


>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2
           {Mouse (Mus musculus) [TaxId: 10090]}
          Length = 71

 Score = 71.5 bits (175), Expect = 2e-16
 Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 19/81 (23%)

Query: 321 GSALGAGEEEMDTGYGPDEPRYCRCNEQAHYNFYTIFCSQVAFGVMVACDSKNCPYEWYH 380
           GS+  +GE  +D    P+EP YC              C+QV++G M+ CD++ CP EW+H
Sbjct: 1   GSSGSSGEFAID----PNEPTYC-------------LCNQVSYGEMIGCDNEQCPIEWFH 43

Query: 381 CECVGIAPDNPPKGKWYCPLC 401
             CV       PKGKWYCP C
Sbjct: 44  FSCVS--LTYKPKGKWYCPKC 62


>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress
           (Arabidopsis thaliana) [TaxId: 3702]}
          Length = 78

 Score = 63.6 bits (154), Expect = 1e-13
 Identities = 22/96 (22%), Positives = 32/96 (33%), Gaps = 24/96 (25%)

Query: 321 GSALGAGEEEMDTGYGPDEPRYCRCNEQAHYNFYTIFCSQVAFGVMVACDSKNCPYEWYH 380
           GS+  +GE+       P+    C C               +    M+ C+   C   W H
Sbjct: 1   GSSGSSGEDPFQ----PEIKVRCVCGNS------------LETDSMIQCEDPRCHV-WQH 43

Query: 381 CECVGIAPDNPPKG------KWYCPLCLEKMAASKA 410
             CV + PD P  G       +YC +C      S  
Sbjct: 44  VGCVIL-PDKPMDGNPPLPESFYCEICRLTSGPSSG 78


>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress
           (Arabidopsis thaliana) [TaxId: 3702]}
          Length = 72

 Score = 61.6 bits (149), Expect = 6e-13
 Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 20/91 (21%)

Query: 321 GSALGAGEEEMDTGYGPDEPR-YCRCNEQAHYNFYTIFCSQVAFGVMVACDSKNCPYEWY 379
           GS+  +G E      G D  +  C+C  +                 M+ACD   C   W+
Sbjct: 1   GSSGSSGMER-----GVDNWKVDCKCGTKDDDG-----------ERMLACD--GCG-VWH 41

Query: 380 HCECVGIAPDNPPKGKWYCPLCLEKMAASKA 410
           H  C+GI   +    K+ C  C+E    S  
Sbjct: 42  HTRCIGINNADALPSKFLCFRCIELSGPSSG 72


>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1,
           Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
          Length = 76

 Score = 59.7 bits (144), Expect = 3e-12
 Identities = 26/95 (27%), Positives = 34/95 (35%), Gaps = 24/95 (25%)

Query: 321 GSALGAGEEEMDTGYGPDEPRYCRCNEQAHYNFYTIFCSQVAFGVMVACDSKNCPYEWYH 380
           GS+  +GE E+          YC C  Q H N             M+ CD   C  EW+H
Sbjct: 1   GSSGSSGECEVY----DPNALYCICR-QPHNN-----------RFMICCD--RCE-EWFH 41

Query: 381 CECVGIAPDNP-----PKGKWYCPLCLEKMAASKA 410
            +CVGI+             + CP C      S  
Sbjct: 42  GDCVGISEARGRLLERNGEDYICPNCTILSGPSSG 76


>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 61

 Score = 57.7 bits (139), Expect = 9e-12
 Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 5/60 (8%)

Query: 350 HYNFYTIFCSQVAFGVMVACDSKNCPYEWYHCECVGIAPDNPPKGKWYCPLCLEKMAASK 409
           H+  +   C     G ++ CD   CP   YH  C+       P G+W CP C       K
Sbjct: 7   HHMEFCRVCKDG--GELLCCD--TCPS-SYHIHCLNPPLPEIPNGEWLCPRCTCPALKGK 61


>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress
           (Arabidopsis thaliana) [TaxId: 3702]}
          Length = 64

 Score = 54.7 bits (131), Expect = 1e-10
 Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 4/48 (8%)

Query: 364 GVMVACDSKNCPYEWYHCECVGIAPDN-PPKGKWYCPLCLEKMAASKA 410
              + CD   C   W+H +CV I P       ++ CP C  K   S  
Sbjct: 20  EFWICCD--LCE-MWFHGKCVKITPARAEHIKQYKCPSCSNKSGPSSG 64


>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta)
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 70

 Score = 53.1 bits (127), Expect = 6e-10
 Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 17/72 (23%)

Query: 338 DEPRYCRCNEQAHYNFYTIFCSQVAFGVMVACDSKNCPYEWYHCECVGIAPDNPPKGKWY 397
           D    CR             C +   G +V C+   C +  +H +C   A  + P  +W 
Sbjct: 5   DSATICRV------------CQKP--GDLVMCN--QCEF-CFHLDCHLPALQDVPGEEWS 47

Query: 398 CPLCLEKMAASK 409
           C LC       +
Sbjct: 48  CSLCHVLPDLKE 59


>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus)
           [TaxId: 10090]}
          Length = 79

 Score = 52.0 bits (124), Expect = 2e-09
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 15/67 (22%)

Query: 339 EPRYCRCNEQAHYNFYTIFCSQVAFGVMVACDSKNCPYEWYHCECVGIAPDN-PPKGKWY 397
            P YC C +  + N             M+ C    C  +W+H  CVGI  +N      ++
Sbjct: 11  VPVYCLCRQPYNVN-----------HFMIECG--LCQ-DWFHGSCVGIEEENAVDIDIYH 56

Query: 398 CPLCLEK 404
           CP C   
Sbjct: 57  CPDCEAV 63


>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription
           factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
          Length = 51

 Score = 47.3 bits (112), Expect = 3e-08
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 3/36 (8%)

Query: 366 MVACDSKNCPYEWYHCECVGIAPDNPPKGKWYCPLC 401
           ++ CD   C  + +H  C+  A    P G+W CP C
Sbjct: 15  LILCDE--CN-KAFHLFCLRPALYEVPDGEWQCPAC 47


>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus)
           [TaxId: 10090]}
          Length = 88

 Score = 42.1 bits (98), Expect = 6e-06
 Identities = 16/86 (18%), Positives = 26/86 (30%), Gaps = 18/86 (20%)

Query: 325 GAGEEEMDTGYGPDEPRYCR-CNEQAHYNFYTIFCSQVAFGVMVACDSKNCPYEWYHCEC 383
           G+        +  +    C  C +           +  +   +V C    C    YH +C
Sbjct: 1   GSSGSSGADDFAMEMGLACVVCRQ----------MTVASGNQLVECQE--CH-NLYHQDC 47

Query: 384 VGI----APDNPPKGKWYCPLCLEKM 405
                     N P+  WYC  C  +M
Sbjct: 48  HKPQVTDKEVNDPRLVWYCARCTRQM 73


>d2csba5 a.267.1.1 (A:3-293) Topoisomerase V, catalytic domain
           {Methanopyrus kandleri [TaxId: 2320]}
          Length = 291

 Score = 30.1 bits (67), Expect = 0.45
 Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 2/91 (2%)

Query: 55  PEQRQREYENLLQEYNKPMIDSEEKI--NLATQIQEFFNKYTRKLEQDIQKFKLELEADN 112
           P +   E+E L++ Y+ P+ + EE+I   L        ++  R+L   + + + E + ++
Sbjct: 161 PPEMAGEFERLIERYDVPIDEKEERILEILRENPWTPHDEIARRLGLSVSEVEGEKDPES 220

Query: 113 SGITEILEKRVTDSQQKENQRSNLVAARSKM 143
           SGI  +  + V + +  E      V  R ++
Sbjct: 221 SGIYSLWSRVVVNIEYDERTAKRHVKRRDRL 251


>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 67

 Score = 27.0 bits (60), Expect = 0.95
 Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 4/37 (10%)

Query: 388 PDNPPKGKWYCPLCLEKMAASKA--NHYGGSSRKHRK 422
           PD P  G   C  C      S     H+   S+ H+K
Sbjct: 8   PDLPGGGLHRCLACARYFIDSTNLKTHF--RSKDHKK 42


>d2nlza1 d.153.1.6 (A:3-539) Cephalosporin acylase {Bacillus
           halodurans [TaxId: 86665]}
          Length = 537

 Score = 29.5 bits (65), Expect = 0.97
 Identities = 19/151 (12%), Positives = 41/151 (27%), Gaps = 7/151 (4%)

Query: 180 VASSAGNNAINYSLSNIGAGGMAITAAASQAIAATQQMKQGRRTASLKASYEAIHGGAGS 239
           +A++     +  + + IG+   A+     +          G   A +  + EA+      
Sbjct: 50  IATATALTVLEPTSNGIGSDAFALVWTKGKLHGLN-----GSGRAPMSLTMEAVKAKGYE 104

Query: 240 SADIISKELAGAAQTAIAAIQDTHKKNKKKSVGGSSNLSMGTINMNTTSSALHSLMMETS 299
                   +      A  A  +  K      +  S   ++         +   +   + +
Sbjct: 105 QELPPYGVIPVTVPGAPGAWAELAKMYGNLPLAASLAPAIRYAEEGYPVTPTLAKYWKAA 164

Query: 300 SSNSKLHGSTSAAAPMED--LAAGSALGAGE 328
               K   +     P  D     G A   GE
Sbjct: 165 YDRVKTEWTDDVYQPWFDTFAPKGRAPRVGE 195


>d2fr5a1 c.97.1.1 (A:11-146) mono-domain cytidine deaminase {Mouse
           (Mus musculus) [TaxId: 10090]}
          Length = 136

 Score = 27.7 bits (61), Expect = 1.5
 Identities = 13/61 (21%), Positives = 20/61 (32%), Gaps = 2/61 (3%)

Query: 163 ASSALTQEY-KYSNFNSGVASSAGNNAINYSLSNIGAGGMAITAAASQAIAATQQMKQGR 221
           +  A    Y  YS F  G A   G+  I +S  NI      +   A +        +  +
Sbjct: 12  SREAKKSAYCPYSRFPVGAALLTGDGRI-FSGCNIENACYPLGVCAERTAIQKAISEGYK 70

Query: 222 R 222
            
Sbjct: 71  D 71


>d1daba_ b.80.1.7 (A:) Virulence factor P.69 pertactin {Bordetella
           pertussis [TaxId: 520]}
          Length = 539

 Score = 28.6 bits (62), Expect = 1.6
 Identities = 20/158 (12%), Positives = 38/158 (24%), Gaps = 2/158 (1%)

Query: 177 NSGVASSAGNNAINYSLSNIGAGGMAITAAASQAIAATQQMKQGRRTASLKASYEAIHGG 236
           N+      G       +     GG  +  A+   I  + +  QG    +  A  +  +G 
Sbjct: 3   NNQSIVKTGERQHGIHIQGSDPGG--VRTASGTTIKVSGRQAQGILLENPAAELQFRNGS 60

Query: 237 AGSSADIISKELAGAAQTAIAAIQDTHKKNKKKSVGGSSNLSMGTINMNTTSSALHSLMM 296
             SS  +    +     T           +   +  G +    G         A  S+  
Sbjct: 61  VTSSGQLSDDGIRRFLGTVTVKAGKLVADHATLANVGDTWDDDGIALYVAGEQAQASIAD 120

Query: 297 ETSSSNSKLHGSTSAAAPMEDLAAGSALGAGEEEMDTG 334
            T      +     A   ++  A               
Sbjct: 121 STLQGAGGVQIERGANVTVQRSAIVDGGLHIGALQSLQ 158


>d1h4ra1 a.11.2.1 (A:104-214) Merlin {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 111

 Score = 26.4 bits (58), Expect = 3.1
 Identities = 7/57 (12%), Positives = 22/57 (38%), Gaps = 10/57 (17%)

Query: 6   DYIELVEILPQELRDRFTEMRLLDLQSQNSLDQLQNKVNQFYQMAASMTPEQRQREY 62
            ++   E+LP+ + +            Q + +  + ++  +Y        ++ + EY
Sbjct: 58  GFLAQEELLPKRVIN----------LYQMTPEMWEERITAWYAEHRGRARDEAEMEY 104


>d1x2na1 a.4.1.1 (A:6-67) Homeobox protein pknox1 {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 62

 Score = 24.7 bits (54), Expect = 4.8
 Identities = 10/53 (18%), Positives = 16/53 (30%), Gaps = 7/53 (13%)

Query: 54 TPEQRQREYENLLQEYNKPMIDSEEKINLA-------TQIQEFFNKYTRKLEQ 99
                     L Q    P    +EK  +A        Q+  +F    R++ Q
Sbjct: 10 PKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQ 62


>d2i6ca1 d.108.1.1 (A:1001-1160) Putative acetyltransferase PA4794
           {Pseudomonas aeruginosa [TaxId: 287]}
          Length = 160

 Score = 26.3 bits (56), Expect = 5.0
 Identities = 7/74 (9%), Positives = 17/74 (22%)

Query: 331 MDTGYGPDEPRYCRCNEQAHYNFYTIFCSQVAFGVMVACDSKNCPYEWYHCECVGIAPDN 390
           +                  +          +      A  +    Y     +   IA  +
Sbjct: 83  VAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERH 142

Query: 391 PPKGKWYCPLCLEK 404
            P G+    + ++K
Sbjct: 143 DPDGRRVALIQMDK 156


>d1fsga_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase
           {Toxoplasma gondii [TaxId: 5811]}
          Length = 233

 Score = 26.5 bits (58), Expect = 5.3
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 6/36 (16%)

Query: 307 GSTSAAAPMEDLAAGSALGAGEEEMDTGYGPDEPRY 342
           GS  A+ P+ED       G G+  ++  Y PD   Y
Sbjct: 1   GSHMASKPIEDY------GKGKGRIEPMYIPDNTFY 30


>d1r44a_ d.65.1.4 (A:) D-Ala-D-Ala dipeptidase VanX {Enterococcus
           faecium [TaxId: 1352]}
          Length = 202

 Score = 26.4 bits (58), Expect = 6.0
 Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 10/57 (17%)

Query: 329 EEMDTGYGPDEPRYCRCNEQAHYNFYTIFCSQVA-----FGVMVACDSKNCPYEWYH 380
           E +  G   D       +E++H+    I C++         +M     +    EW+H
Sbjct: 133 ELVPMGSRFDFM-----DERSHHAANGISCNEAQNRRRLRSIMENSGFEAYSLEWWH 184


>d1t3wa_ a.236.1.1 (A:) DNA primase DnaG, C-terminal domain
           {Escherichia coli [TaxId: 562]}
          Length = 134

 Score = 25.6 bits (56), Expect = 6.1
 Identities = 12/63 (19%), Positives = 20/63 (31%)

Query: 26  RLLDLQSQNSLDQLQNKVNQFYQMAASMTPEQRQREYENLLQEYNKPMIDSEEKINLATQ 85
            L  L   + +         F      M     +   E L+       + +EE++ L T 
Sbjct: 69  TLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTL 128

Query: 86  IQE 88
            QE
Sbjct: 129 NQE 131


>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis
           familiaris) [TaxId: 9615]}
          Length = 190

 Score = 26.0 bits (56), Expect = 6.3
 Identities = 12/114 (10%), Positives = 22/114 (19%), Gaps = 9/114 (7%)

Query: 307 GSTSAAAPMEDLAAGSALGAGEEEMDTGYGPDEPRYCRCNEQAHYNFYTIFCSQVAFGVM 366
           G TS A+          L       D     +     +     +Y    +  ++      
Sbjct: 24  GFTSLASQCTAQELVMTLNELFARFDKLAAENHCLRIKILGDCYYCVSGLPEARADHAHC 83

Query: 367 V---------ACDSKNCPYEWYHCECVGIAPDNPPKGKWYCPLCLEKMAASKAN 411
                     A               VGI       G          + ++   
Sbjct: 84  CVEMGMDMIEAISLVREMTGVNVNMRVGIHSGRVHCGVLGLRKWQFDVWSNDVT 137


>d1pufb_ a.4.1.1 (B:) pbx1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 73

 Score = 24.5 bits (53), Expect = 6.6
 Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 7/63 (11%)

Query: 52  SMTPEQRQREYENLLQEYNKPMIDSEEKINLA-------TQIQEFFNKYTRKLEQDIQKF 104
           +   +  +   E      + P    E K  LA       +Q+  +F     + +++I KF
Sbjct: 7   NFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKF 66

Query: 105 KLE 107
           + E
Sbjct: 67  QEE 69


>d1v0da_ d.4.1.7 (A:) Caspase-activated DNase, CAD (DffB, DFF40)
           {Mouse (Mus musculus) [TaxId: 10090]}
          Length = 245

 Score = 26.3 bits (58), Expect = 6.7
 Identities = 12/57 (21%), Positives = 27/57 (47%), Gaps = 3/57 (5%)

Query: 100 DIQKFKLELEADNSGITEILEKRVTDSQQKENQR--SNLVAARSKMNTLRNLRSELP 154
           DI +F       ++G+ +   ++++D Q    Q+  ++L+   S+ N     R + P
Sbjct: 3   DITRFLSVFNEPHAGVIQAARQQLSDEQAPLRQKLLADLLHHVSQ-NITAETREQDP 58


>d2gtaa1 a.204.1.2 (A:1-98) Hypothetical protein YpjD {Bacillus
           subtilis [TaxId: 1423]}
          Length = 98

 Score = 25.1 bits (55), Expect = 7.2
 Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 11/77 (14%)

Query: 32  SQNSLDQLQNKVNQFYQMAASMTPEQRQREYENLLQEYNKPMIDSEEKINLATQIQEFFN 91
           S  ++  +Q +V+++          Q +  Y + L    +   +  E   LA ++   + 
Sbjct: 2   SDKTMKDIQAEVDRYI--------GQFKEGYFSPLAMMARLTEELGE---LAREVNHRYG 50

Query: 92  KYTRKLEQDIQKFKLEL 108
           +  +K  +D +  + E+
Sbjct: 51  EKPKKATEDDKSMEEEI 67


>d1alna2 c.97.1.1 (A:151-294) Two-domain cytidine deaminase
           {Escherichia coli [TaxId: 562]}
          Length = 144

 Score = 25.6 bits (56), Expect = 7.3
 Identities = 8/45 (17%), Positives = 11/45 (24%), Gaps = 4/45 (8%)

Query: 173 YSNFNSGVASSAGNNAI----NYSLSNIGAGGMAITAAASQAIAA 213
           YS   SGVA    +  I        +        +  A       
Sbjct: 56  YSKSPSGVALECKDGRIFSGSYAENAAFNPTLPPLQGALILLNLK 100


>d1bg1a1 a.47.1.1 (A:136-321) STAT3b {Mouse (Mus musculus) [TaxId:
           10090]}
          Length = 186

 Score = 25.6 bits (56), Expect = 9.1
 Identities = 16/104 (15%), Positives = 35/104 (33%), Gaps = 18/104 (17%)

Query: 56  EQRQREYENLLQEYNKPMIDSEEKINLATQIQEFFNKYTRKLEQDIQKFKLELEADNSGI 115
            ++Q+  E  LQ+  K + D E+K+ +   +Q+ F         D     L+ + D    
Sbjct: 3   TEKQQMLEQHLQDVRKRVQDLEQKMKVVENLQDDF---------DFNYKTLKSQGDMQD- 52

Query: 116 TEILEKRVTDSQQKENQRSNLVAARSKMNTLRNLRSELPNATDK 159
                    +   +   R  +      +  L  +R  + +    
Sbjct: 53  --------LNGNNQSVTRQKMQQLEQMLTALDQMRRSIVSELAG 88


>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding
           protein 1 (GBP1), C-terminal domain {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 300

 Score = 25.9 bits (56), Expect = 9.4
 Identities = 20/130 (15%), Positives = 43/130 (33%), Gaps = 2/130 (1%)

Query: 4   LEDYIELVEILPQELRDRFTEMRLLDLQSQNSLDQLQNKVNQFYQMAASMTPEQRQREYE 63
            + Y E      Q      T ++  +  +   L   Q    +  ++       +  +   
Sbjct: 161 KKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASA 220

Query: 64  NLLQEYNKPMIDSEEKINLATQIQEFFNKYTRKLEQDIQKFKLELEADNSGITEILEKRV 123
            +L E  +     +         QE   + T K+E D  +   E E   +   +  E+ +
Sbjct: 221 KMLHEMQRKNE--QMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLL 278

Query: 124 TDSQQKENQR 133
            +  QKE++ 
Sbjct: 279 KEGFQKESRI 288


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.311    0.125    0.348 

Gapped
Lambda     K      H
   0.267   0.0525    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,412,731
Number of extensions: 62614
Number of successful extensions: 239
Number of sequences better than 10.0: 1
Number of HSP's gapped: 226
Number of HSP's successfully gapped: 41
Length of query: 422
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 334
Effective length of database: 1,199,356
Effective search space: 400584904
Effective search space used: 400584904
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 54 (25.1 bits)