BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8393
(98 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24179|SLY1_DROME Protein sly1 homolog OS=Drosophila melanogaster GN=Slh PE=2 SV=3
Length = 657
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 23 ALKQMMNFNEVQSKLSSSEPVWKILIFDRCGQDIISPVLSKNDLRELGVTL 73
A+KQM+N N Q K ++EPVWKILI+DR GQDIISP++S +LRELGVTL
Sbjct: 11 AIKQMLNLNSQQPKALAAEPVWKILIYDRVGQDIISPIISIKELRELGVTL 61
>sp|Q8BRF7|SCFD1_MOUSE Sec1 family domain-containing protein 1 OS=Mus musculus GN=Scfd1
PE=2 SV=1
Length = 639
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/57 (57%), Positives = 46/57 (80%)
Query: 19 QKSYALKQMMNFNEVQSKLSSSEPVWKILIFDRCGQDIISPVLSKNDLRELGVTLFL 75
+++ ALK+M+NFN K S+ EPVWK+LI+DR GQDIISP+LS +LR++G+TL L
Sbjct: 15 RQTVALKRMLNFNVPHVKNSTGEPVWKVLIYDRFGQDIISPLLSVKELRDMGITLHL 71
>sp|Q8WVM8|SCFD1_HUMAN Sec1 family domain-containing protein 1 OS=Homo sapiens GN=SCFD1
PE=1 SV=4
Length = 642
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/57 (57%), Positives = 46/57 (80%)
Query: 19 QKSYALKQMMNFNEVQSKLSSSEPVWKILIFDRCGQDIISPVLSKNDLRELGVTLFL 75
+++ ALK+M+NFN K S+ EPVWK+LI+DR GQDIISP+LS +LR++G+TL L
Sbjct: 18 RQTVALKRMLNFNVPHIKNSTGEPVWKVLIYDRFGQDIISPLLSVKELRDMGITLHL 74
>sp|Q62991|SCFD1_RAT Sec1 family domain-containing protein 1 OS=Rattus norvegicus
GN=Scfd1 PE=1 SV=1
Length = 637
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/57 (57%), Positives = 45/57 (78%)
Query: 19 QKSYALKQMMNFNEVQSKLSSSEPVWKILIFDRCGQDIISPVLSKNDLRELGVTLFL 75
+++ ALK+M+NFN K S EPVWK+LI+DR GQDIISP+LS +LR++G+TL L
Sbjct: 13 RQTVALKRMLNFNVPHVKNSPGEPVWKVLIYDRFGQDIISPLLSVKELRDMGITLHL 69
>sp|O18637|SLY1_DROVI Protein sly1 homolog OS=Drosophila virilis GN=Slh PE=3 SV=1
Length = 656
Score = 72.4 bits (176), Expect = 8e-13, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 23 ALKQMMNFNEVQSKLSSSEPVWKILIFDRCGQDIISPVLSKNDLRELGVTL 73
A+KQM+N N Q K +++ VWKILI+DR GQDIISP++S +LRELGVTL
Sbjct: 11 AIKQMLNLNSQQPKAMAADAVWKILIYDRVGQDIISPIISIKELRELGVTL 61
>sp|O74534|SLY1_SCHPO Protein sly1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=sly1 PE=3 SV=1
Length = 639
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 40/59 (67%), Gaps = 6/59 (10%)
Query: 23 ALKQMMNFNEVQSKLSSSE------PVWKILIFDRCGQDIISPVLSKNDLRELGVTLFL 75
+L++++N N+ ++L SS P+WK+LIFD+ G + IS VL +DLR+ GVT+ +
Sbjct: 19 SLEKLLNLNQDVNELESSPQHASNFPIWKVLIFDKAGSETISSVLRISDLRKHGVTVHM 77
>sp|Q9SL48|SLY1_ARATH SEC1 family transport protein SLY1 OS=Arabidopsis thaliana
GN=SLY1 PE=1 SV=1
Length = 627
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 9/73 (12%)
Query: 4 LIIGLGQTQKGVVIIQKSYALKQMMNFNE-VQSKLSSSEPVWKILIFDRCGQDIISPVLS 62
+ + L Q Q VI +M+N N+ + +++E V+KILI+DR Q+I+SP+
Sbjct: 1 MALNLRQKQTECVI--------RMLNLNQPLNPSGTANEEVYKILIYDRFCQNILSPLTH 52
Query: 63 KNDLRELGVTLFL 75
DLR+ GVTLF
Sbjct: 53 VKDLRKHGVTLFF 65
>sp|Q54IJ1|SCFD1_DICDI Sec1 family domain-containing protein 1 homolog OS=Dictyostelium
discoideum GN=scfd1 PE=3 SV=2
Length = 673
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 37 LSSSEPVWKILIFDRCGQDIISPVLSKNDLRELGVTLFL 75
+S + VWK+LIFD +II+P+L+K LR GVTL+L
Sbjct: 60 ISGWQEVWKVLIFDTHCSNIIAPILTKGALRNQGVTLYL 98
>sp|Q8SS97|SLY1_ENCCU SEC1 family transport protein SLY1 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=SLY1 PE=1 SV=1
Length = 521
Score = 35.8 bits (81), Expect = 0.081, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 44 WKILIFDRCGQDIISPVLSKNDLRELGVTL-FLYSAE 79
WKIL+ D Q II P++ ++LRE G+T FL + E
Sbjct: 21 WKILVLDSRTQQIIGPLMKVSELRECGITAHFLVTQE 57
>sp|P22213|SLY1_YEAST Protein SLY1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SLY1 PE=1 SV=1
Length = 666
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 37 LSSSEPVWKILIFDRCGQDIISPVLSKNDLRELGVTL 73
+ E +WK+LI D IS VL NDL + G+T+
Sbjct: 46 FNQQEIIWKVLILDIKSTATISSVLRVNDLLKAGITV 82
>sp|Q6H7U3|FH10_ORYSJ Formin-like protein 10 OS=Oryza sativa subsp. japonica GN=FH10 PE=2
SV=1
Length = 881
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 14/65 (21%)
Query: 48 IFDRCGQDIISP--------------VLSKNDLRELGVTLFLYSAEVLDEEYSALCLMCL 93
I+ C QDI+SP + S + EL TLF+ +L E S+ C+
Sbjct: 61 IWSVCLQDIVSPEDTFGFGESFAWDELSSHSTEDELKATLFMELMALLPPEKSSFTYDCI 120
Query: 94 RMNCY 98
R NC+
Sbjct: 121 RANCF 125
>sp|Q816E3|AMPA_BACCR Probable cytosol aminopeptidase OS=Bacillus cereus (strain ATCC
14579 / DSM 31) GN=pepA PE=3 SV=1
Length = 494
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 14 GVVIIQKSYALKQMMNFNEV-----QSKLSSSEPVWKILIFDR 51
GV++ +Y M N E+ ++ + + EP+W++ IFDR
Sbjct: 373 GVIVALGNYTTGAMTNNEELFEQVLEASMETDEPIWQLPIFDR 415
>sp|B7HBG1|AMPA_BACC4 Probable cytosol aminopeptidase OS=Bacillus cereus (strain B4264)
GN=pepA PE=3 SV=1
Length = 494
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 14 GVVIIQKSYALKQMMNFNEV-----QSKLSSSEPVWKILIFDR 51
GV++ +Y M N E+ ++ + + EP+W++ IFDR
Sbjct: 373 GVIVALGNYTTGAMTNNEELFEQVLEASMETDEPIWQLPIFDR 415
>sp|B7IMU0|AMPA_BACC2 Probable cytosol aminopeptidase OS=Bacillus cereus (strain G9842)
GN=pepA PE=3 SV=1
Length = 494
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 14 GVVIIQKSYALKQMMNFNEV-----QSKLSSSEPVWKILIFDR 51
GV++ +Y M N E+ ++ + + EP+W++ IFDR
Sbjct: 373 GVIVALGNYTTGAMTNNEELFEQVLEASMETDEPIWQLPIFDR 415
>sp|Q7XWP3|SEC1A_ORYSJ Probable protein transport Sec1a OS=Oryza sativa subsp. japonica
GN=Os04g0252400 PE=3 SV=2
Length = 665
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 30 FNEVQSKLSSSEPVWKILIFDRCGQDIISPVLSKNDLRELGVTL 73
F ++S SS+ WK+LI D+ I+S D+ E GV+L
Sbjct: 28 FEMLRSTKKSSKSAWKVLIMDKLTVKIMSFSCKMADVMEEGVSL 71
>sp|Q851W1|SLY1_ORYSJ SEC1 family transport protein SLY1 OS=Oryza sativa subsp.
japonica GN=SLY1 PE=2 SV=1
Length = 623
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 38 SSSEPVWKILIFDRCGQDIISPVLSKNDLRELGVTLFL 75
+ E +KIL+ D +++PVL +LR GVTL L
Sbjct: 37 AEEEEAYKILVMDSPCVALLAPVLRVGELRRHGVTLHL 74
>sp|Q9C5X3|KEULE_ARATH SNARE-interacting protein KEULE OS=Arabidopsis thaliana GN=KEU
PE=1 SV=2
Length = 666
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 35 SKLSSSEPVWKILIFDRCGQDIISPVLSKNDLRELGVTL 73
+K SS+ WK+LI D+ I+S D+ + GV+L
Sbjct: 34 AKTGSSKSTWKVLIMDKLTVKIMSYACKMADITQEGVSL 72
>sp|Q5S003|SPG17_MOUSE Sperm-associated antigen 17 OS=Mus musculus GN=Spag17 PE=1 SV=1
Length = 2175
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 19 QKSYALKQMMNFNEVQ--SKLSSSEPVWKILIF 49
K YALK NF+ VQ ++ S P+W+ L F
Sbjct: 531 HKKYALKDQKNFDPVQVEQEMQSKLPLWEFLQF 563
>sp|Q8KEW9|SYY_CHLTE Tyrosine--tRNA ligase OS=Chlorobium tepidum (strain ATCC 49652 /
DSM 12025 / TLS) GN=tyrS PE=3 SV=1
Length = 406
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 47 LIFDRCGQDIISPVLSKNDLRELGVTLFLYSAEVLDEEYSALC 89
+I D G+ P L+ + RE G + F ++++LD E + +C
Sbjct: 84 MIGDPSGKSKTRPQLTAEEARENGKSYFEQASKILDPEKTTIC 126
>sp|Q3B5D0|SYY_PELLD Tyrosine--tRNA ligase OS=Pelodictyon luteolum (strain DSM 273)
GN=tyrS PE=3 SV=1
Length = 405
Score = 28.9 bits (63), Expect = 9.1, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 47 LIFDRCGQDIISPVLSKNDLRELGVTLFLYSAEVLDEEYSALC 89
+I D G+ P LS + RE G + F ++++LD + +C
Sbjct: 84 MIGDPSGKSKTRPQLSAEEARENGASYFEQASKILDPHKTTIC 126
>sp|Q5HYL7|TM196_HUMAN Transmembrane protein 196 OS=Homo sapiens GN=TMEM196 PE=2 SV=2
Length = 178
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 11/78 (14%)
Query: 1 MNCLIIGLGQTQKGVVIIQKSYALKQMMNFNEVQSKLSSSEPVWKILIFDRCGQDIISPV 60
++ L IGLG + V + S AL+ E + +L S PVW + F CG I +
Sbjct: 14 LSVLEIGLGVSSVAVGAVSFSLALR------EHKPQLGDSSPVWSGVCFLLCG---ICGI 64
Query: 61 LSKNDLRELGVTLFLYSA 78
L ++ G+ + L+SA
Sbjct: 65 LCAK--KKSGLVMILFSA 80
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,976,109
Number of Sequences: 539616
Number of extensions: 1096666
Number of successful extensions: 3123
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3108
Number of HSP's gapped (non-prelim): 24
length of query: 98
length of database: 191,569,459
effective HSP length: 67
effective length of query: 31
effective length of database: 155,415,187
effective search space: 4817870797
effective search space used: 4817870797
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)