BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8399
(167 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|260820052|ref|XP_002605349.1| hypothetical protein BRAFLDRAFT_74172 [Branchiostoma floridae]
gi|229290682|gb|EEN61359.1| hypothetical protein BRAFLDRAFT_74172 [Branchiostoma floridae]
Length = 1242
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 88/163 (53%), Gaps = 19/163 (11%)
Query: 3 NNRNHSMYHAWYNNRNHSMYDNTRNNNRHYAMYINRN--HYMYNTRNNNRIHPMYDNTRN 60
NNR +S Y NNR +S Y R+NNR Y+ Y N Y + RNNNR + Y R+
Sbjct: 178 NNRQYSFY-CRSNNRQYSFY--CRSNNRQYSFYCRSNNRQYSFYCRNNNRQYSFY--CRS 232
Query: 61 NNRHYTMH---NNRNHSMYHAWNDNRNHSMYDNTRNNNRHYTMH---NNRNHSMYNTRNI 114
NNR Y+ + NNR +S + ++NR +S Y R+NNR Y+ + NNR +S Y R+
Sbjct: 233 NNRQYSFYCRSNNRQYS-FSCRSNNRQYSFY--CRSNNRQYSFYCRSNNRQYSFY-CRSN 288
Query: 115 NRNHSMYKNTGNNNRHYSMYINRNHSMYTLFYGIRNRNVNVLC 157
NR +S Y + NNR YS Y N+ Y+ + NR + C
Sbjct: 289 NRQYSFYCRS--NNRQYSFYCRSNNRQYSFYCRSNNRQYSFYC 329
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 92/173 (53%), Gaps = 28/173 (16%)
Query: 3 NNRNHSMYH-------AWY---NNRNHSMYDNTRNNNRHYAMYINRN--HYMYNTRNNNR 50
NNR +S YH ++Y NNR +S Y R+NNR Y+ Y N Y + R+NNR
Sbjct: 156 NNRQYSFYHRSNNRQYSFYRRSNNRQYSFY--CRSNNRQYSFYCRSNNRQYSFYCRSNNR 213
Query: 51 IHPMYDNTRNNNRHYTMH---NNRNHSMYHAWNDNRNHSMYDNTRNNNRHYTMH---NNR 104
+ Y RNNNR Y+ + NNR +S Y ++NR +S + R+NNR Y+ + NNR
Sbjct: 214 QYSFY--CRNNNRQYSFYCRSNNRQYSFY-CRSNNRQYSF--SCRSNNRQYSFYCRSNNR 268
Query: 105 NHSMYNTRNINRNHSMYKNTGNNNRHYSMYINRNHSMYTLFYGIRNRNVNVLC 157
+S Y R+ NR +S Y + NNR YS Y N+ Y+ + NR + C
Sbjct: 269 QYSFY-CRSNNRQYSFYCRS--NNRQYSFYCRSNNRQYSFYCRSNNRQYSFYC 318
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 89/172 (51%), Gaps = 26/172 (15%)
Query: 3 NNRNHSMYHAWYNNRNHSMYDNTRNNNRHYAMYINRN--HYMYNTRNNNRIHPMYDNTRN 60
NNR +S Y NNR +S Y R+NNR Y+ Y N Y ++ R+NNR + Y R+
Sbjct: 211 NNRQYSFY-CRNNNRQYSFY--CRSNNRQYSFYCRSNNRQYSFSCRSNNRQYSFY--CRS 265
Query: 61 NNRHYTMH---NNRNHSMYHAWNDNRNHSMYDNTRNNNRHYTMH---NNRNHSMYNTRNI 114
NNR Y+ + NNR +S Y ++NR +S Y R+NNR Y+ + NNR +S Y R+
Sbjct: 266 NNRQYSFYCRSNNRQYSFY-CRSNNRQYSFY--CRSNNRQYSFYCRSNNRQYSFY-CRSN 321
Query: 115 NRNHSMYKNTGN---------NNRHYSMYINRNHSMYTLFYGIRNRNVNVLC 157
NR +S Y + N NNR YS Y N+ Y+ + I + C
Sbjct: 322 NRQYSFYCRSNNRQYSFSCRSNNRQYSFYCRSNNRQYSFYCRITTDSTASTC 373
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 83/150 (55%), Gaps = 19/150 (12%)
Query: 3 NNRNHSMYHAWYNNRNHSMYDNTRNNNRHYAMYINRN--HYMYNTRNNNRIHPMYDNTRN 60
NNR +S Y NNR +S Y RNNNR Y+ Y N Y + R+NNR + + R+
Sbjct: 200 NNRQYSFY-CRSNNRQYSFY--CRNNNRQYSFYCRSNNRQYSFYCRSNNRQYSF--SCRS 254
Query: 61 NNRHYTMH---NNRNHSMYHAWNDNRNHSMYDNTRNNNRHYTMH---NNRNHSMYNTRNI 114
NNR Y+ + NNR +S Y ++NR +S Y R+NNR Y+ + NNR +S Y R+
Sbjct: 255 NNRQYSFYCRSNNRQYSFY-CRSNNRQYSFY--CRSNNRQYSFYCRSNNRQYSFY-CRSN 310
Query: 115 NRNHSMYKNTGNNNRHYSMYINRNHSMYTL 144
NR +S Y + NNR YS Y N+ Y+
Sbjct: 311 NRQYSFYCRS--NNRQYSFYCRSNNRQYSF 338
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 88/163 (53%), Gaps = 33/163 (20%)
Query: 3 NNRNHSMYHAWYNNRNHSMYDNTRNNNRHYAMYI---NRNHYMYNTRNNNRIHPMYDNTR 59
NNR +S YH NNR +S Y R+NNR Y+ Y NR H Y R+NNR + + R
Sbjct: 387 NNRQYSFYHHS-NNRQYSFY--CRSNNRQYSFYCRSNNRQHSFY-CRSNNRQYSF--SCR 440
Query: 60 NNNRHYTMH---NNRNHSMYH----------AWNDNRNHSMYDNTRNNNRHYTM---HNN 103
+NNR Y+ + +NR +S YH ++NR HS Y ++ NNR Y+ NN
Sbjct: 441 SNNRQYSFYRRSSNRQYSFYHHSNNRQYSFSCRSNNRQHSFYCHS--NNRQYSFSCRSNN 498
Query: 104 RNHSMYNTRNINRNHSMYKNTGNNNRHYSMYI---NRNHSMYT 143
R +S Y R+ NR +S Y ++ NNR YS Y+ NR HS Y
Sbjct: 499 RQYSFYR-RSSNRQYSFYHHS--NNRQYSFYLPHNNRQHSFYC 538
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 86/161 (53%), Gaps = 29/161 (18%)
Query: 3 NNRNHSMYHAWYNNRNHSMYDNTRNNNRHYAMYINRN--HYMYNTRNNNRIHPMYDNTRN 60
NNR +S Y NNR +S Y R+NNR Y+ Y N Y + R+NNR + Y R+
Sbjct: 277 NNRQYSFY-CRSNNRQYSFY--CRSNNRQYSFYCRSNNRQYSFYCRSNNRQYSFY--CRS 331
Query: 61 NNRHYTM---HNNRNHSMYHAWNDNRNHSMY-----DNT----RNNNRHYTMH---NNRN 105
NNR Y+ NNR +S Y ++NR +S Y D+T R+NNR Y+ + NNR
Sbjct: 332 NNRQYSFSCRSNNRQYSFY-CRSNNRQYSFYCRITTDSTASTCRSNNRQYSFYRRSNNRQ 390
Query: 106 HSMYNTRNINRNHSMYKNTGNNNRHYSMYI---NRNHSMYT 143
+S Y+ N NR +S Y + NNR YS Y NR HS Y
Sbjct: 391 YSFYHHSN-NRQYSFYCRS--NNRQYSFYCRSNNRQHSFYC 428
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 87/163 (53%), Gaps = 19/163 (11%)
Query: 3 NNRNHSMYHAWYNNRNHSMYDNTRNNNRHYAMY--INRNHYMYNTRNNNRIHPMYDNTRN 60
NNR +S Y NNR +S Y R+NNR Y+ Y I + R+NNR + Y R+
Sbjct: 90 NNRQYSFY-CRSNNRQYSFY--YRSNNRQYSFYCRITTDSTASTDRSNNRQYSFY--CRS 144
Query: 61 NNRHYTMH---NNRNHSMYHAWNDNRNHSMYDNTRNNNRHYTMH---NNRNHSMYNTRNI 114
NNR Y+ + NNR +S YH N NR +S Y R+NNR Y+ + NNR +S Y R+
Sbjct: 145 NNRQYSFYCRSNNRQYSFYHRSN-NRQYSFYR--RSNNRQYSFYCRSNNRQYSFY-CRSN 200
Query: 115 NRNHSMYKNTGNNNRHYSMYINRNHSMYTLFYGIRNRNVNVLC 157
NR +S Y + NNR YS Y N+ Y+ + NR + C
Sbjct: 201 NRQYSFYCRS--NNRQYSFYCRNNNRQYSFYCRSNNRQYSFYC 241
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 83/160 (51%), Gaps = 25/160 (15%)
Query: 15 NNRNHSMYDNTRNNNRHYAMYINRN--HYMYNTRNNNRIHPMYDNTRNNNRHYTMH---N 69
NNR +S Y R+NNR Y+ Y N Y + R+NNR + Y R+NNR Y+ + N
Sbjct: 134 NNRQYSFY--CRSNNRQYSFYCRSNNRQYSFYHRSNNRQYSFYR--RSNNRQYSFYCRSN 189
Query: 70 NRNHSMYHAWNDNRNHSMYDNTRNNNRHYTMH---NNRNHSMYNTRNINRNHSMYKNTGN 126
NR +S Y ++NR +S Y R+NNR Y+ + NNR +S Y R+ NR +S Y + N
Sbjct: 190 NRQYSFY-CRSNNRQYSFY--CRSNNRQYSFYCRNNNRQYSFY-CRSNNRQYSFYCRSNN 245
Query: 127 ---------NNRHYSMYINRNHSMYTLFYGIRNRNVNVLC 157
NNR YS Y N+ Y+ + NR + C
Sbjct: 246 RQYSFSCRSNNRQYSFYCRSNNRQYSFYCRSNNRQYSFYC 285
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 90/172 (52%), Gaps = 26/172 (15%)
Query: 3 NNRNHSMYHAWYNNRNHSMYDNTRNNNRHYAMYINRN--HYMYNTRNNNRIHPMYDNTRN 60
NNR +S Y N R HS Y R+NNR Y+ Y N Y + R+NNR + + R+
Sbjct: 35 NNRQYSFYRRSIN-RQHSFY--CRSNNRQYSFYRRSNNRQYSFYCRSNNRQYSF--SCRS 89
Query: 61 NNRHYTMH---NNRNHSMYHAWNDNRNHSMY-----DNT----RNNNRHYTMH---NNRN 105
NNR Y+ + NNR +S Y+ N NR +S Y D+T R+NNR Y+ + NNR
Sbjct: 90 NNRQYSFYCRSNNRQYSFYYRSN-NRQYSFYCRITTDSTASTDRSNNRQYSFYCRSNNRQ 148
Query: 106 HSMYNTRNINRNHSMYKNTGNNNRHYSMYINRNHSMYTLFYGIRNRNVNVLC 157
+S Y R+ NR +S Y + NNR YS Y N+ Y+ + NR + C
Sbjct: 149 YSFY-CRSNNRQYSFYHRS--NNRQYSFYRRSNNRQYSFYCRSNNRQYSFYC 197
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 83/162 (51%), Gaps = 30/162 (18%)
Query: 3 NNRNHSMYHAWYNNRNHSMYDNTRNNNRHYAMYINRN--HYMYNTRNNNRIHPMYDNTRN 60
NNR +S Y NNR +S Y R+NNR Y+ Y N Y ++ R+NNR + Y R+
Sbjct: 299 NNRQYSFY-CRSNNRQYSFY--CRSNNRQYSFYCRSNNRQYSFSCRSNNRQYSFY--CRS 353
Query: 61 NNRHYTMH--------------NNRNHSMYHAWNDNRNHSMYDNTRNNNRHYTMH---NN 103
NNR Y+ + NNR +S Y N NR +S Y ++ NNR Y+ + NN
Sbjct: 354 NNRQYSFYCRITTDSTASTCRSNNRQYSFYRRSN-NRQYSFYHHS--NNRQYSFYCRSNN 410
Query: 104 RNHSMYNTRNINRNHSMYKNTGNNNRHYSMYINRNHSMYTLF 145
R +S Y R+ NR HS Y + NNR YS N+ Y+ +
Sbjct: 411 RQYSFY-CRSNNRQHSFYCRS--NNRQYSFSCRSNNRQYSFY 449
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 33/181 (18%)
Query: 3 NNRNHSMYHAWYNNRNHSMYDNTRNNNRHYAMYINRN--HYMYNTRNNNRIHPMYDNTRN 60
+NR +S YH NNR +S + R+NNR ++ Y + N Y ++ R+NNR + Y R+
Sbjct: 453 SNRQYSFYHHS-NNRQYSF--SCRSNNRQHSFYCHSNNRQYSFSCRSNNRQYSFYR--RS 507
Query: 61 NNRHYTMH---NNRNHSMYHAWNDNRNHSMYD---------NTRNNNRHYTMH---NNRN 105
+NR Y+ + NNR +S Y N NR HS Y + R+NNR Y+ + NNR
Sbjct: 508 SNRQYSFYHHSNNRQYSFYLPHN-NRQHSFYCHSNNRQYSFSCRSNNRQYSFYCRSNNRQ 566
Query: 106 HSMYNTRNINRNHSMYKNTGN---------NNRHYSMYINRNHSMYTLFYGIRNRNVNVL 156
+S Y R+ NR +S Y+ + N NNR YS Y + N+ Y+ + NR +
Sbjct: 567 YSFY-CRSNNRQYSFYRRSSNRQYSFYHHSNNRQYSFYHHSNNRQYSFYCRSNNRQYSFY 625
Query: 157 C 157
C
Sbjct: 626 C 626
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 74/136 (54%), Gaps = 24/136 (17%)
Query: 3 NNRNHSMYHAWYNNRNHSMYD---------NTRNNNRHYAMYINRN--HYMYNTRNNNRI 51
NNR +S Y +NNR HS Y + R+NNR Y+ Y N Y + R+NNR
Sbjct: 519 NNRQYSFYLP-HNNRQHSFYCHSNNRQYSFSCRSNNRQYSFYCRSNNRQYSFYCRSNNRQ 577
Query: 52 HPMYDNTRNNNRHYTMH---NNRNHSMYHAWNDNRNHSMYDNTRNNNRHYTMH---NNRN 105
+ Y R++NR Y+ + NNR +S YH N NR +S Y R+NNR Y+ + NNR
Sbjct: 578 YSFYR--RSSNRQYSFYHHSNNRQYSFYHHSN-NRQYSFY--CRSNNRQYSFYCRSNNRQ 632
Query: 106 HSMYNTRNINRNHSMY 121
+S Y R+ NR +S Y
Sbjct: 633 YSFY-CRSNNRQYSFY 647
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 87/163 (53%), Gaps = 33/163 (20%)
Query: 3 NNRNHSMYHAWYNNRNHSMYDNTRNNNRHYAMYI---NRNH----------YMYNTRNNN 49
NNR +S Y +NR +S Y ++ NNR Y+ Y+ NR H Y ++ R+NN
Sbjct: 497 NNRQYSFYRRS-SNRQYSFYHHS--NNRQYSFYLPHNNRQHSFYCHSNNRQYSFSCRSNN 553
Query: 50 RIHPMYDNTRNNNRHYTMH---NNRNHSMYHAWNDNRNHSMYDNTRNNNRHYTMH---NN 103
R + Y R+NNR Y+ + NNR +S Y + NR +S Y ++ NNR Y+ + NN
Sbjct: 554 RQYSFY--CRSNNRQYSFYCRSNNRQYSFYR-RSSNRQYSFYHHS--NNRQYSFYHHSNN 608
Query: 104 RNHSMYNTRNINRNHSMYKNTGNNNRHYSMYI---NRNHSMYT 143
R +S Y R+ NR +S Y + NNR YS Y NR +S Y
Sbjct: 609 RQYSFY-CRSNNRQYSFYCRS--NNRQYSFYCRSNNRQYSFYC 648
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 83/163 (50%), Gaps = 33/163 (20%)
Query: 3 NNRNHSMYHAWYNNRNHSMYDNTRNNNRHYAMYI-------------NRNHYMYNTRNNN 49
NNR +S + NNR +S Y R+NNR Y+ Y N Y + R+NN
Sbjct: 332 NNRQYS-FSCRSNNRQYSFY--CRSNNRQYSFYCRITTDSTASTCRSNNRQYSFYRRSNN 388
Query: 50 RIHPMYDNTRNNNRHYTMH---NNRNHSMYHAWNDNRNHSMYDNTRNNNRHYTM---HNN 103
R + Y ++ NNR Y+ + NNR +S Y ++NR HS Y R+NNR Y+ NN
Sbjct: 389 RQYSFYHHS--NNRQYSFYCRSNNRQYSFY-CRSNNRQHSFY--CRSNNRQYSFSCRSNN 443
Query: 104 RNHSMYNTRNINRNHSMYKNTGNNNRHYSMYI---NRNHSMYT 143
R +S Y R+ NR +S Y ++ NNR YS NR HS Y
Sbjct: 444 RQYSFYR-RSSNRQYSFYHHS--NNRQYSFSCRSNNRQHSFYC 483
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 58 TRNNNRHYTMH---NNRNHSMYHAWNDNRNHSMYDNTRNNNRHYTMH---NNRNHSMYNT 111
R+ NR Y+ + NNR +S Y + NR HS Y R+NNR Y+ + NNR +S Y
Sbjct: 21 CRSINRQYSFYYRNNNRQYSFYR-RSINRQHSFY--CRSNNRQYSFYRRSNNRQYSFY-C 76
Query: 112 RNINRNHSMYKNTGNNNRHYSMYINRNHSMYTLFYGIRNRNVNVLC 157
R+ NR +S + +NNR YS Y N+ Y+ +Y NR + C
Sbjct: 77 RSNNRQYSF--SCRSNNRQYSFYCRSNNRQYSFYYRSNNRQYSFYC 120
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 57/110 (51%), Gaps = 15/110 (13%)
Query: 32 YAMYINRNHYMYNTRNNNRIHPMYDNTRNNNRH---YTMHNNRNHSMYHAWNDNRNHSMY 88
Y INR + Y RNNNR + Y R+ NR Y NNR +S Y N NR +S Y
Sbjct: 20 YCRSINRQYSFYY-RNNNRQYSFYR--RSINRQHSFYCRSNNRQYSFYRRSN-NRQYSFY 75
Query: 89 DNTRNNNRHYTM---HNNRNHSMYNTRNINRNHSMYKNTGNNNRHYSMYI 135
R+NNR Y+ NNR +S Y R+ NR +S Y + NNR YS Y
Sbjct: 76 --CRSNNRQYSFSCRSNNRQYSFY-CRSNNRQYSFYYRS--NNRQYSFYC 120
>gi|156361029|ref|XP_001625324.1| predicted protein [Nematostella vectensis]
gi|156212151|gb|EDO33224.1| predicted protein [Nematostella vectensis]
Length = 269
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 85/152 (55%), Gaps = 24/152 (15%)
Query: 3 NNRNHSMYHAWYNNRNHSMYDNTRNNNRHYAMYIN---RNHYMYNTRNNNRIHPMYDNTR 59
N R H++Y N R H+MYD R N R + MY R H MY+ R N R H MYD R
Sbjct: 106 NLRTHTLYDQV-NLRTHTMYD--RVNLRTHTMYDQVNLRTHTMYD-RVNLRTHTMYD--R 159
Query: 60 NNNRHYTMHNN---RNHSMYHAWNDNRNHSMYDNTRNNNRHYTMH---NNRNHSMYNTRN 113
N R +TM++ R H+MY N R H+MYD R N R +TM+ N R H+MY+ N
Sbjct: 160 VNLRTHTMYDQVNLRTHTMYDRVN-LRTHTMYD--RVNLRTHTMYDRVNLRTHTMYDRVN 216
Query: 114 INRNHSMYKNTGNNNRHYSMY--IN-RNHSMY 142
+ R H+MY N R ++MY +N R H+MY
Sbjct: 217 L-RTHTMYDRV--NLRTHTMYDRVNLRTHTMY 245
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 87/152 (57%), Gaps = 24/152 (15%)
Query: 3 NNRNHSMYHAWYNNRNHSMYDNTRNNNRHYAMY--IN-RNHYMYNTRNNNRIHPMYDNTR 59
N R H+MY N R H+MYD R N R + MY +N R H MY+ + N R H MYD R
Sbjct: 128 NLRTHTMYDQV-NLRTHTMYD--RVNLRTHTMYDRVNLRTHTMYD-QVNLRTHTMYD--R 181
Query: 60 NNNRHYTMH---NNRNHSMYHAWNDNRNHSMYDNTRNNNRHYTMH---NNRNHSMYNTRN 113
N R +TM+ N R H+MY N R H+MYD R N R +TM+ N R H+MY+ N
Sbjct: 182 VNLRTHTMYDRVNLRTHTMYDRVN-LRTHTMYD--RVNLRTHTMYDRVNLRTHTMYDRVN 238
Query: 114 INRNHSMYKNTGNNNRHYSMY--IN-RNHSMY 142
+ R H+MY N R ++MY +N R H+MY
Sbjct: 239 L-RTHTMYDRV--NLRTHTMYDRVNLRTHTMY 267
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 85/152 (55%), Gaps = 24/152 (15%)
Query: 3 NNRNHSMYHAWYNNRNHSMYDNTRNNNRHYAMY--IN-RNHYMYNTRNNNRIHPMYDNTR 59
N R H+MY N R H+MYD N R + MY +N R H MY+ R N R H MYD
Sbjct: 117 NLRTHTMYDRV-NLRTHTMYDQV--NLRTHTMYDRVNLRTHTMYD-RVNLRTHTMYDQV- 171
Query: 60 NNNRHYTMH---NNRNHSMYHAWNDNRNHSMYDNTRNNNRHYTMH---NNRNHSMYNTRN 113
N R +TM+ N R H+MY N R H+MYD R N R +TM+ N R H+MY+ N
Sbjct: 172 -NLRTHTMYDRVNLRTHTMYDRVN-LRTHTMYD--RVNLRTHTMYDRVNLRTHTMYDRVN 227
Query: 114 INRNHSMYKNTGNNNRHYSMY--IN-RNHSMY 142
+ R H+MY N R ++MY +N R H+MY
Sbjct: 228 L-RTHTMYDRV--NLRTHTMYDRVNLRTHTMY 256
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 86/162 (53%), Gaps = 33/162 (20%)
Query: 3 NNRNHSMY-------HAWY---NNRNHSMYDNTRNNNRHYAMYIN---RNHYMYNTRNNN 49
N R H+MY HA Y N R H+MYD R N R + +Y R H MY+ R N
Sbjct: 73 NLRTHTMYDRVNLRTHAMYDRVNLRTHTMYD--RVNLRTHTLYDQVNLRTHTMYD-RVNL 129
Query: 50 RIHPMYDNTRNNNRHYTMH---NNRNHSMYHAWNDNRNHSMYDNTRNNNRHYTMH---NN 103
R H MYD N R +TM+ N R H+MY N R H+MYD N R +TM+ N
Sbjct: 130 RTHTMYDQV--NLRTHTMYDRVNLRTHTMYDRVN-LRTHTMYDQV--NLRTHTMYDRVNL 184
Query: 104 RNHSMYNTRNINRNHSMYKNTGNNNRHYSMY--IN-RNHSMY 142
R H+MY+ N+ R H+MY N R ++MY +N R H+MY
Sbjct: 185 RTHTMYDRVNL-RTHTMYDRV--NLRTHTMYDRVNLRTHTMY 223
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 82/146 (56%), Gaps = 23/146 (15%)
Query: 9 MYHAWYNNRNHSMYDNTRNNNRHYAMY--IN-RNHYMYNTRNNNRIHPMYDNTRNNNRHY 65
M + N R H+MYD R N R + MY +N R H MY+ R N R H MYD R N R +
Sbjct: 1 MMYDRVNLRTHTMYD--RVNLRTHTMYDRVNLRTHTMYD-RVNLRTHAMYD--RVNLRTH 55
Query: 66 TMH---NNRNHSMYHAWNDNRNHSMYDNTRNNNRHYTMH---NNRNHSMYNTRNINRNHS 119
TM+ N R H++Y N R H+MYD R N R + M+ N R H+MY+ N+ R H+
Sbjct: 56 TMYDRVNLRTHTLYDRVN-LRTHTMYD--RVNLRTHAMYDRVNLRTHTMYDRVNL-RTHT 111
Query: 120 MYKNTGNNNRHYSMY--IN-RNHSMY 142
+Y N R ++MY +N R H+MY
Sbjct: 112 LYDQV--NLRTHTMYDRVNLRTHTMY 135
>gi|156389203|ref|XP_001634881.1| predicted protein [Nematostella vectensis]
gi|156221969|gb|EDO42818.1| predicted protein [Nematostella vectensis]
Length = 368
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 81/152 (53%), Gaps = 21/152 (13%)
Query: 3 NNRNHSMYHAWYNNRNHSMYDNTRNNNRHYAMYIN---RNHYMYNTRNNNRIHPMYDNTR 59
N R H+MY N R ++MYD R N R Y MY R + MY+ + N R H MYD
Sbjct: 71 NLRKHTMYDQV-NLRTYTMYD--RVNLRTYTMYDQVNLRTYTMYD-QVNLRTHTMYDQV- 125
Query: 60 NNNRHYTMHNN---RNHSMYHAWNDNRNHSMYDNTRNNNRHYTMHNN---RNHSMYNTRN 113
N R +TM++ R H++Y N R ++MYD R N R YTM++ R +MY+ N
Sbjct: 126 -NLRTHTMYDQVNLRTHTIYDRVN-LRTYTMYD--RVNLRTYTMYDQVNLRTRTMYDQVN 181
Query: 114 INRNHSMYKNTGNNNRHYSMYINRNHSMYTLF 145
+ R H+MY N R Y+MY N YT++
Sbjct: 182 L-RKHTMYDRV--NLRTYTMYDRVNLRTYTMY 210
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 80/151 (52%), Gaps = 22/151 (14%)
Query: 3 NNRNHSMYHAWYNNRNHSMYDNTRNNNRHYAMY--INRNHYMYNTRNNNRIHPMYDNTRN 60
N R ++MY N R H+MYD N R + MY +N Y R N R H MYD
Sbjct: 214 NLRTYTMYDQV-NLRTHTMYDQV--NLRTHTMYDQVNLRTYTIYDRVNLRTHTMYDQV-- 268
Query: 61 NNRHYTMHNN---RNHSMYHAWNDNRNHSMYDNTRNNNRHYTMH---NNRNHSMYNTRNI 114
N R +TM++ R H+MY N R H+MYD R N R YTM+ N R H MY+ N+
Sbjct: 269 NLRTHTMYDQVNLRTHTMYDQVN-LRTHTMYD--RVNLRTYTMYGRVNLRTHPMYDRVNL 325
Query: 115 NRNHSMYKNTGNNNRHYSMY--IN-RNHSMY 142
R H+MY N R ++MY +N R H++Y
Sbjct: 326 -RTHTMYGRV--NLRTHTMYDRVNVRTHTVY 353
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 81/160 (50%), Gaps = 29/160 (18%)
Query: 3 NNRNHSMYHAWYNNRNHSMYDNT---------RNNNRHYAMY--INRNHYMYNTRNNNRI 51
N R H+MY N R H+MYD R N R Y MY +N Y + N R
Sbjct: 115 NLRTHTMYDQV-NLRTHTMYDQVNLRTHTIYDRVNLRTYTMYDRVNLRTYTMYDQVNLRT 173
Query: 52 HPMYDNTRNNNRHYTMH---NNRNHSMYHAWNDNRNHSMYDNTRNNNRHYTMHNN---RN 105
MYD N R +TM+ N R ++MY N R ++MYD R N R YTM++ R
Sbjct: 174 RTMYDQV--NLRKHTMYDRVNLRTYTMYDRVN-LRTYTMYD--RVNLRTYTMYDQVNLRT 228
Query: 106 HSMYNTRNINRNHSMYKNTGNNNRHYSMY--IN-RNHSMY 142
H+MY+ N+ R H+MY N R Y++Y +N R H+MY
Sbjct: 229 HTMYDQVNL-RTHTMYDQV--NLRTYTIYDRVNLRTHTMY 265
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 75/149 (50%), Gaps = 29/149 (19%)
Query: 3 NNRNHSMYHAWYNNRNHSMYDNTRNNNRHYAMYINRNHYMYNTRNNNRIHPMYDNTRNNN 62
N R +MY N R H+MYD R N R Y MY R N R + MYD N
Sbjct: 16 NLRTRTMYDQV-NLRKHTMYD--RVNLRTYTMY---------DRVNLRTYTMYDQV--NL 61
Query: 63 RHYTMHNN---RNHSMYHAWNDNRNHSMYDNTRNNNRHYTMHNN---RNHSMYNTRNINR 116
R TM++ R H+MY N R ++MYD R N R YTM++ R ++MY+ N+ R
Sbjct: 62 RTRTMYDQVNLRKHTMYDQVN-LRTYTMYD--RVNLRTYTMYDQVNLRTYTMYDQVNL-R 117
Query: 117 NHSMYKNTGNNNRHYSMYIN---RNHSMY 142
H+MY N R ++MY R H++Y
Sbjct: 118 THTMYDQV--NLRTHTMYDQVNLRTHTIY 144
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 53/119 (44%), Gaps = 34/119 (28%)
Query: 3 NNRNHSMYHAWYNNRNHSMYDNTRNNNRHYAMYINRNHYMYNTRNNNRIHPMYDNTRNNN 62
N R H+MY N R H+MYD R N R Y MY R N R HPMYD
Sbjct: 280 NLRTHTMYDQV-NLRTHTMYD--RVNLRTYTMY---------GRVNLRTHPMYDRV---- 323
Query: 63 RHYTMHNNRNHSMYHAWNDNRNHSMYDNTRNNNRHYTMHNNRNHSMYNTRNINRNHSMY 121
N R H+MY N R H+MYD N R H++Y N+ + H+MY
Sbjct: 324 ------NLRTHTMYGRVN-LRTHTMYDRV----------NVRTHTVYGRVNV-QTHTMY 364
>gi|296005464|ref|XP_002809054.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
gi|225631996|emb|CAX64335.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
Length = 3334
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 76/120 (63%), Gaps = 8/120 (6%)
Query: 15 NNRNHSMYDNTRNNNRH-YAMYINRNHYMYNTRNNNRIHPMYDNTRNNNRHYTMHNNRNH 73
NN + +Y+NT NN++H Y N + ++YN NNN H +Y+NT NN++H ++NN N+
Sbjct: 1231 NNNDKDIYNNTNNNDKHIYNNTNNNDKHIYNNTNNNDKH-IYNNTNNNDKH--IYNNTNN 1287
Query: 74 SMYHAWNDNRNHS--MYDNTRNNNRH-YTMHNNRNHSMYNTRNINRNHSMYKNTGNNNRH 130
+ H +N+ N+ +Y+NT NN++H Y NN + +YN N N H +Y NT NN++H
Sbjct: 1288 NDKHIYNNTNNNDKHIYNNTNNNDKHIYNNTNNNDKHIYNNTNNNDKH-IYNNTNNNDKH 1346
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.129 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,950,305,599
Number of Sequences: 23463169
Number of extensions: 134378213
Number of successful extensions: 1794496
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5398
Number of HSP's successfully gapped in prelim test: 8553
Number of HSP's that attempted gapping in prelim test: 760877
Number of HSP's gapped (non-prelim): 348054
length of query: 167
length of database: 8,064,228,071
effective HSP length: 128
effective length of query: 39
effective length of database: 9,355,909,735
effective search space: 364880479665
effective search space used: 364880479665
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)