Query psy840
Match_columns 178
No_of_seqs 193 out of 838
Neff 5.7
Searched_HMMs 29240
Date Fri Aug 16 17:46:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy840.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/840hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vr3_A Acireductone dioxygenas 100.0 6.3E-54 2.1E-58 351.0 21.6 171 1-173 13-189 (191)
2 1zrr_A E-2/E-2' protein; nicke 100.0 1E-35 3.4E-40 240.8 7.0 150 14-167 10-177 (179)
3 1v70_A Probable antibiotics sy 99.1 1.6E-10 5.3E-15 80.7 7.5 63 81-148 41-104 (105)
4 3h8u_A Uncharacterized conserv 99.1 1.9E-10 6.6E-15 84.4 7.7 70 80-153 51-122 (125)
5 2b8m_A Hypothetical protein MJ 99.1 4.4E-10 1.5E-14 81.7 8.1 66 81-151 40-106 (117)
6 3fjs_A Uncharacterized protein 99.1 2.1E-10 7.3E-15 84.3 6.1 63 80-147 48-110 (114)
7 1x82_A Glucose-6-phosphate iso 99.1 1E-09 3.6E-14 87.8 10.5 68 81-148 86-156 (190)
8 4e2g_A Cupin 2 conserved barre 99.0 6.2E-10 2.1E-14 81.6 6.9 61 81-147 54-114 (126)
9 1vj2_A Novel manganese-contain 99.0 8.9E-10 3.1E-14 81.7 7.2 63 81-148 61-123 (126)
10 2gu9_A Tetracenomycin polyketi 99.0 1.1E-09 3.8E-14 77.8 7.1 62 81-147 34-98 (113)
11 2oa2_A BH2720 protein; 1017534 99.0 3.7E-09 1.3E-13 80.5 10.0 68 81-148 56-125 (148)
12 3l2h_A Putative sugar phosphat 99.0 3.1E-09 1.1E-13 81.7 9.3 68 81-153 60-129 (162)
13 4i4a_A Similar to unknown prot 98.9 1.8E-09 6.3E-14 79.2 7.5 62 80-146 46-107 (128)
14 2o8q_A Hypothetical protein; c 98.9 1.3E-09 4.5E-14 80.9 6.7 79 56-147 39-118 (134)
15 2ozj_A Cupin 2, conserved barr 98.9 7.3E-10 2.5E-14 80.2 5.1 51 81-136 51-101 (114)
16 1yhf_A Hypothetical protein SP 98.9 1.6E-09 5.4E-14 78.0 6.9 89 23-136 12-103 (115)
17 2pfw_A Cupin 2, conserved barr 98.9 1.6E-09 5.5E-14 78.1 6.9 60 81-147 47-106 (116)
18 3ht1_A REMF protein; cupin fol 98.9 1.6E-09 5.5E-14 80.7 6.9 73 80-157 51-126 (145)
19 1yfu_A 3-hydroxyanthranilate-3 98.9 3.4E-09 1.2E-13 85.2 9.1 56 79-135 46-101 (174)
20 3d82_A Cupin 2, conserved barr 98.9 8.5E-10 2.9E-14 77.4 5.0 50 81-135 42-92 (102)
21 1fi2_A Oxalate oxidase, germin 98.9 4.8E-09 1.6E-13 84.3 9.8 68 81-148 85-156 (201)
22 1lr5_A Auxin binding protein 1 98.9 2.8E-09 9.5E-14 82.2 8.0 69 81-149 54-127 (163)
23 3ibm_A Cupin 2, conserved barr 98.9 4.2E-09 1.4E-13 82.7 9.0 64 80-148 68-132 (167)
24 2i45_A Hypothetical protein; n 98.9 1.2E-09 4.1E-14 78.3 4.7 51 81-135 40-91 (107)
25 3kgz_A Cupin 2 conserved barre 98.9 2.6E-09 9E-14 83.4 6.9 65 81-150 57-121 (156)
26 2q30_A Uncharacterized protein 98.9 3.4E-09 1.2E-13 75.2 6.8 63 80-148 45-109 (110)
27 3i7d_A Sugar phosphate isomera 98.9 6.4E-09 2.2E-13 81.1 8.9 63 82-149 58-123 (163)
28 4b29_A Dimethylsulfoniopropion 98.9 6.5E-09 2.2E-13 86.2 8.3 65 80-149 144-208 (217)
29 3jzv_A Uncharacterized protein 98.9 5.9E-09 2E-13 82.2 7.7 65 80-149 65-129 (166)
30 3lwc_A Uncharacterized protein 98.8 3.8E-09 1.3E-13 78.9 6.1 64 81-153 53-116 (119)
31 2f4p_A Hypothetical protein TM 98.8 1.1E-08 3.8E-13 78.3 8.2 63 81-147 61-123 (147)
32 2fqp_A Hypothetical protein BP 98.8 6.2E-09 2.1E-13 73.8 5.8 60 81-143 31-91 (97)
33 3d0j_A Uncharacterized protein 98.8 7.4E-09 2.5E-13 80.6 6.5 92 78-173 39-135 (140)
34 2bnm_A Epoxidase; oxidoreducta 98.8 2E-08 6.7E-13 79.1 9.1 62 83-145 135-197 (198)
35 3rns_A Cupin 2 conserved barre 98.8 8E-09 2.7E-13 84.3 6.7 72 59-147 38-109 (227)
36 1o4t_A Putative oxalate decarb 98.8 1.4E-08 4.8E-13 76.1 7.3 59 81-144 70-129 (133)
37 2opk_A Hypothetical protein; p 98.8 2.5E-08 8.5E-13 73.1 7.9 62 82-146 47-109 (112)
38 2vqa_A SLL1358 protein, MNCA; 98.8 3.5E-08 1.2E-12 84.7 10.1 68 81-148 65-133 (361)
39 1o5u_A Novel thermotoga mariti 98.8 1.3E-08 4.4E-13 74.2 6.3 50 82-136 44-93 (101)
40 1zvf_A 3-hydroxyanthranilate 3 98.7 3.4E-08 1.2E-12 79.4 8.7 57 79-136 45-105 (176)
41 3cew_A Uncharacterized cupin p 98.7 2.2E-08 7.6E-13 73.5 7.1 60 83-147 42-102 (125)
42 4h7l_A Uncharacterized protein 98.7 1.1E-08 3.7E-13 81.0 5.7 59 81-148 58-119 (157)
43 3h7j_A Bacilysin biosynthesis 98.7 1.7E-08 5.9E-13 83.0 7.1 63 81-148 159-221 (243)
44 1dgw_A Canavalin; duplicated s 98.7 4.8E-08 1.6E-12 77.3 9.4 65 81-147 54-120 (178)
45 2vqa_A SLL1358 protein, MNCA; 98.7 5.1E-08 1.7E-12 83.7 10.0 67 81-147 247-314 (361)
46 1y9q_A Transcriptional regulat 98.7 2.1E-08 7.2E-13 78.9 6.9 60 82-147 120-179 (192)
47 1j58_A YVRK protein; cupin, de 98.7 3.5E-08 1.2E-12 85.7 8.0 68 80-148 91-158 (385)
48 2xlg_A SLL1785 protein, CUCA; 98.7 5.4E-08 1.8E-12 81.2 8.3 65 81-145 56-137 (239)
49 3rns_A Cupin 2 conserved barre 98.7 3.1E-08 1.1E-12 80.8 6.3 57 80-143 165-222 (227)
50 1fxz_A Glycinin G1; proglycini 98.6 2E-07 6.9E-12 84.8 11.7 71 80-151 350-423 (476)
51 2d5f_A Glycinin A3B4 subunit; 98.6 1.4E-07 4.9E-12 86.1 10.3 73 80-153 379-454 (493)
52 4axo_A EUTQ, ethanolamine util 98.6 6.5E-08 2.2E-12 75.9 6.9 62 85-154 81-142 (151)
53 3c3v_A Arachin ARAH3 isoform; 98.6 2.2E-07 7.6E-12 85.3 11.3 72 80-152 384-458 (510)
54 1sef_A Conserved hypothetical 98.6 8.7E-08 3E-12 80.2 7.7 59 81-144 195-255 (274)
55 1y3t_A Hypothetical protein YX 98.6 8.8E-08 3E-12 80.8 7.4 62 81-148 231-293 (337)
56 1j58_A YVRK protein; cupin, de 98.6 2.1E-07 7.3E-12 80.7 9.9 67 81-147 270-337 (385)
57 2cav_A Protein (canavalin); vi 98.6 1.6E-07 5.3E-12 84.8 9.2 78 60-148 88-166 (445)
58 3es1_A Cupin 2, conserved barr 98.6 1.6E-07 5.6E-12 75.0 8.2 64 81-149 92-155 (172)
59 3nw4_A Gentisate 1,2-dioxygena 98.6 6.9E-08 2.4E-12 85.4 6.5 58 81-143 116-174 (368)
60 1y3t_A Hypothetical protein YX 98.6 1.1E-07 3.6E-12 80.2 7.4 61 81-147 59-120 (337)
61 1juh_A Quercetin 2,3-dioxygena 98.6 2.3E-07 8E-12 80.6 9.4 64 83-147 65-129 (350)
62 1fxz_A Glycinin G1; proglycini 98.5 2E-07 6.9E-12 84.8 9.0 92 41-147 36-149 (476)
63 2qnk_A 3-hydroxyanthranilate 3 98.5 2.5E-07 8.6E-12 79.3 8.6 58 81-140 44-102 (286)
64 3h7j_A Bacilysin biosynthesis 98.5 1.4E-07 4.7E-12 77.6 6.6 60 80-144 46-106 (243)
65 3bcw_A Uncharacterized protein 98.5 6.7E-08 2.3E-12 72.9 4.2 67 55-136 46-112 (123)
66 1uij_A Beta subunit of beta co 98.5 3.1E-07 1E-11 82.1 9.2 77 59-146 50-127 (416)
67 2ea7_A 7S globulin-1; beta bar 98.5 3.6E-07 1.2E-11 82.1 9.5 76 60-146 63-139 (434)
68 2vpv_A Protein MIF2, MIF2P; nu 98.5 6E-07 2E-11 71.4 9.7 54 82-140 104-157 (166)
69 2e9q_A 11S globulin subunit be 98.5 2.6E-07 9E-12 83.7 8.4 69 79-147 74-163 (459)
70 2d40_A Z3393, putative gentisa 98.5 9.2E-08 3.1E-12 83.5 5.2 61 80-145 112-173 (354)
71 1juh_A Quercetin 2,3-dioxygena 98.5 3.2E-07 1.1E-11 79.7 8.5 63 80-147 264-326 (350)
72 4e2q_A Ureidoglycine aminohydr 98.5 5.7E-07 2E-11 76.4 9.7 53 83-140 202-254 (266)
73 1rc6_A Hypothetical protein YL 98.5 1.8E-07 6E-12 77.6 6.4 58 81-143 192-251 (261)
74 1sq4_A GLXB, glyoxylate-induce 98.5 2.8E-07 9.6E-12 77.8 7.6 58 82-144 84-141 (278)
75 2pyt_A Ethanolamine utilizatio 98.5 2.5E-07 8.5E-12 70.4 6.5 57 87-151 74-130 (133)
76 3bu7_A Gentisate 1,2-dioxygena 98.5 2.3E-07 7.8E-12 82.7 7.0 95 44-144 258-366 (394)
77 3qac_A 11S globulin SEED stora 98.5 4.4E-07 1.5E-11 82.5 8.7 96 38-148 35-167 (465)
78 3c3v_A Arachin ARAH3 isoform; 98.5 3.9E-07 1.3E-11 83.6 8.5 93 41-148 36-163 (510)
79 2d5f_A Glycinin A3B4 subunit; 98.5 4.7E-07 1.6E-11 82.7 8.9 90 41-147 33-149 (493)
80 3fz3_A Prunin; TREE NUT allerg 98.5 1E-06 3.5E-11 81.2 11.1 72 80-152 406-480 (531)
81 1sfn_A Conserved hypothetical 98.4 8.6E-07 2.9E-11 73.2 9.2 52 83-139 181-232 (246)
82 2arc_A ARAC, arabinose operon 98.4 4.2E-07 1.5E-11 68.1 6.5 49 82-135 32-80 (164)
83 2phl_A Phaseolin; plant SEED s 98.4 7.8E-07 2.7E-11 79.3 8.9 79 57-147 52-137 (397)
84 3bu7_A Gentisate 1,2-dioxygena 98.4 3.7E-07 1.3E-11 81.4 6.6 59 80-143 135-195 (394)
85 3ksc_A LEGA class, prolegumin; 98.3 3.7E-06 1.3E-10 77.0 12.1 87 63-150 343-442 (496)
86 2e9q_A 11S globulin subunit be 98.3 2.5E-06 8.6E-11 77.3 10.5 86 62-148 306-403 (459)
87 2phl_A Phaseolin; plant SEED s 98.3 2.2E-06 7.6E-11 76.4 9.5 67 80-148 251-325 (397)
88 1uij_A Beta subunit of beta co 98.3 2.2E-06 7.6E-11 76.5 9.5 67 80-148 261-342 (416)
89 3ksc_A LEGA class, prolegumin; 98.3 1.5E-06 5.1E-11 79.6 8.4 69 79-147 57-146 (496)
90 2o1q_A Putative acetyl/propion 98.3 5.2E-07 1.8E-11 69.3 4.6 79 60-152 46-124 (145)
91 3lag_A Uncharacterized protein 98.3 4.3E-07 1.5E-11 65.4 3.8 62 81-144 30-92 (98)
92 3kgl_A Cruciferin; 11S SEED gl 98.3 5.2E-06 1.8E-10 75.5 11.6 86 62-148 307-404 (466)
93 2d40_A Z3393, putative gentisa 98.3 1.3E-06 4.3E-11 76.3 7.0 50 81-135 281-330 (354)
94 1sq4_A GLXB, glyoxylate-induce 98.2 3.5E-06 1.2E-10 71.0 8.8 54 83-141 207-260 (278)
95 3qac_A 11S globulin SEED stora 98.2 6.5E-06 2.2E-10 74.8 10.3 86 62-148 307-404 (465)
96 3s7i_A Allergen ARA H 1, clone 98.2 4.5E-06 1.6E-10 74.8 9.0 75 55-142 42-118 (418)
97 2ozi_A Hypothetical protein RP 98.2 2E-06 6.8E-11 62.1 5.2 62 81-144 30-92 (98)
98 1rc6_A Hypothetical protein YL 98.2 3.7E-06 1.3E-10 69.6 7.1 54 87-145 80-133 (261)
99 2ea7_A 7S globulin-1; beta bar 98.1 5.8E-06 2E-10 74.3 8.6 67 80-148 278-358 (434)
100 3s7i_A Allergen ARA H 1, clone 98.1 6.5E-06 2.2E-10 73.8 8.5 67 80-148 275-367 (418)
101 1sef_A Conserved hypothetical 98.1 6.7E-06 2.3E-10 68.7 7.3 52 86-142 82-133 (274)
102 3kgl_A Cruciferin; 11S SEED gl 98.1 1E-05 3.6E-10 73.5 8.8 97 35-147 24-181 (466)
103 2q1z_B Anti-sigma factor CHRR, 98.1 7.4E-06 2.5E-10 65.9 6.7 65 60-143 127-191 (195)
104 2cav_A Protein (canavalin); vi 98.0 2.6E-05 8.8E-10 70.3 10.7 67 80-148 293-371 (445)
105 4e2q_A Ureidoglycine aminohydr 98.0 7.9E-06 2.7E-10 69.3 6.6 67 82-153 84-152 (266)
106 3nw4_A Gentisate 1,2-dioxygena 98.0 6.2E-06 2.1E-10 72.9 6.1 51 81-136 292-342 (368)
107 2y0o_A Probable D-lyxose ketol 98.0 1.1E-05 3.9E-10 64.7 6.2 59 79-137 64-145 (175)
108 3gbg_A TCP pilus virulence reg 98.0 2.2E-05 7.4E-10 64.2 7.9 64 60-134 9-72 (276)
109 3es4_A Uncharacterized protein 98.0 2.2E-05 7.5E-10 59.0 7.2 52 81-136 54-105 (116)
110 3ebr_A Uncharacterized RMLC-li 97.9 7.7E-06 2.6E-10 64.1 4.8 69 58-143 42-112 (159)
111 3fz3_A Prunin; TREE NUT allerg 97.8 5.4E-05 1.8E-09 69.8 8.1 34 113-146 174-207 (531)
112 3cjx_A Protein of unknown func 97.7 6.6E-05 2.3E-09 59.2 6.7 60 60-135 45-104 (165)
113 1sfn_A Conserved hypothetical 97.6 3.5E-05 1.2E-09 63.5 4.3 42 88-134 68-109 (246)
114 3o14_A Anti-ecfsigma factor, C 97.6 0.00012 4.1E-09 60.2 7.5 63 60-142 45-107 (223)
115 3myx_A Uncharacterized protein 97.6 9.9E-05 3.4E-09 61.7 6.6 48 85-137 62-109 (238)
116 3bal_A Acetylacetone-cleaving 97.4 0.00024 8.1E-09 55.8 6.0 80 54-148 43-122 (153)
117 3st7_A Capsular polysaccharide 97.4 0.00061 2.1E-08 57.5 8.5 64 81-144 285-352 (369)
118 3myx_A Uncharacterized protein 96.9 0.0016 5.4E-08 54.4 6.3 48 85-136 183-230 (238)
119 2pa7_A DTDP-6-deoxy-3,4-keto-h 96.8 0.0061 2.1E-07 46.9 8.4 57 80-137 47-105 (141)
120 1yud_A Hypothetical protein SO 96.6 0.0029 9.9E-08 50.4 5.3 106 54-171 45-160 (170)
121 3bb6_A Uncharacterized protein 96.5 0.024 8.2E-07 43.1 9.8 72 78-149 24-103 (127)
122 3eqe_A Putative cystein deoxyg 96.1 0.063 2.1E-06 42.3 10.7 70 80-149 81-155 (171)
123 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 96.1 0.019 6.5E-07 46.5 7.8 58 80-137 72-135 (197)
124 3ejk_A DTDP sugar isomerase; Y 96.0 0.057 2E-06 42.8 10.1 56 81-136 66-131 (174)
125 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 96.0 0.025 8.6E-07 45.2 7.9 57 81-137 61-128 (185)
126 3kmh_A D-lyxose isomerase; cup 95.9 0.028 9.6E-07 47.1 8.2 67 79-145 117-207 (246)
127 2ixk_A DTDP-4-dehydrorhamnose 95.9 0.032 1.1E-06 44.6 8.0 57 81-137 62-129 (184)
128 1eyb_A Homogentisate 1,2-dioxy 95.8 0.013 4.5E-07 53.2 6.2 55 87-146 177-231 (471)
129 3ryk_A DTDP-4-dehydrorhamnose 95.6 0.048 1.7E-06 44.4 8.2 58 80-137 82-151 (205)
130 1dzr_A DTDP-4-dehydrorhamnose 95.6 0.044 1.5E-06 43.8 7.7 57 81-137 60-128 (183)
131 2gm6_A Cysteine dioxygenase ty 95.6 0.068 2.3E-06 43.2 9.0 71 79-149 90-169 (208)
132 3o14_A Anti-ecfsigma factor, C 95.3 0.021 7.1E-07 46.8 5.0 60 59-138 147-206 (223)
133 2qnk_A 3-hydroxyanthranilate 3 95.0 0.041 1.4E-06 47.1 6.2 52 89-147 227-278 (286)
134 4gjz_A Lysine-specific demethy 94.7 0.073 2.5E-06 41.7 6.5 52 84-135 140-225 (235)
135 2c0z_A NOVW; isomerase, epimer 94.6 0.12 4E-06 42.5 7.8 58 81-138 68-137 (216)
136 1oi6_A PCZA361.16; epimerase, 94.5 0.13 4.6E-06 41.7 7.9 58 81-138 60-129 (205)
137 2vec_A YHAK, pirin-like protei 94.3 0.18 6.1E-06 42.1 8.4 63 81-147 77-143 (256)
138 1wlt_A 176AA long hypothetical 94.3 0.22 7.6E-06 40.2 8.6 58 80-137 77-146 (196)
139 1upi_A DTDP-4-dehydrorhamnose 93.8 0.25 8.4E-06 40.8 8.1 58 81-138 79-148 (225)
140 3d8c_A Hypoxia-inducible facto 93.5 0.38 1.3E-05 41.4 9.2 66 82-147 197-298 (349)
141 4diq_A Lysine-specific demethy 93.4 0.82 2.8E-05 41.7 11.6 66 81-146 178-263 (489)
142 2xdv_A MYC-induced nuclear ant 93.3 0.41 1.4E-05 42.9 9.4 55 81-135 153-223 (442)
143 1tq5_A Protein YHHW; bicupin, 93.0 0.5 1.7E-05 38.9 8.9 63 81-147 54-120 (242)
144 1vrb_A Putative asparaginyl hy 92.9 0.43 1.5E-05 41.1 8.6 55 81-135 154-242 (342)
145 4hn1_A Putative 3-epimerase in 92.6 0.46 1.6E-05 38.5 7.9 59 80-138 56-126 (201)
146 2qjv_A Uncharacterized IOLB-li 91.8 0.18 6.2E-06 42.7 4.7 51 80-133 167-233 (270)
147 3eln_A Cysteine dioxygenase ty 91.4 3 0.0001 33.2 11.4 72 79-150 81-162 (200)
148 3al5_A HTYW5, JMJC domain-cont 90.7 1.2 4.1E-05 37.9 8.9 65 83-149 182-277 (338)
149 3dl3_A Tellurite resistance pr 89.9 4 0.00014 30.4 10.1 71 78-149 26-101 (119)
150 1dgw_X Canavalin; duplicated s 89.7 0.26 8.9E-06 34.0 3.2 28 80-107 48-76 (79)
151 2oyz_A UPF0345 protein VPA0057 88.1 1.2 4.2E-05 32.0 5.9 46 88-136 41-86 (94)
152 3uss_A Putative uncharacterize 87.5 4.7 0.00016 32.5 9.8 71 79-149 84-163 (211)
153 1zx5_A Mannosephosphate isomer 85.8 0.37 1.3E-05 40.9 2.4 45 89-133 118-180 (300)
154 3k2o_A Bifunctional arginine d 85.4 1.1 3.8E-05 38.6 5.3 27 110-136 255-281 (336)
155 1qwr_A Mannose-6-phosphate iso 84.6 0.45 1.6E-05 40.6 2.4 23 111-133 158-180 (319)
156 2p17_A Pirin-like protein; GK1 84.3 3.4 0.00011 34.5 7.6 63 81-147 52-117 (277)
157 2rg4_A Uncharacterized protein 83.8 1.7 5.8E-05 34.9 5.4 56 78-133 113-191 (216)
158 1xru_A 4-deoxy-L-threo-5-hexos 83.3 4.2 0.00014 34.5 7.9 56 80-137 195-255 (282)
159 2wfp_A Mannose-6-phosphate iso 81.6 0.8 2.7E-05 40.3 2.9 22 112-133 241-262 (394)
160 1ywk_A 4-deoxy-L-threo-5-hexos 80.6 3.6 0.00012 35.1 6.5 51 80-131 195-250 (289)
161 3hqx_A UPF0345 protein aciad03 80.6 5 0.00017 29.7 6.4 50 84-136 52-102 (111)
162 1dgw_Y Canavalin; duplicated s 80.3 4.5 0.00015 28.8 6.0 36 111-148 6-41 (93)
163 3eo6_A Protein of unknown func 80.1 2.2 7.4E-05 31.4 4.3 49 84-135 49-98 (106)
164 2xxz_A Lysine-specific demethy 78.7 2.5 8.4E-05 36.7 4.9 27 109-135 277-303 (332)
165 3kv4_A PHD finger protein 8; e 78.6 2.9 9.8E-05 37.6 5.5 54 83-136 246-326 (447)
166 1qwr_A Mannose-6-phosphate iso 77.8 2 6.7E-05 36.6 4.0 36 88-128 269-304 (319)
167 1xe7_A YML079WP, hypothetical 77.7 8.4 0.00029 31.1 7.5 94 54-156 75-176 (203)
168 1zx5_A Mannosephosphate isomer 76.9 4 0.00014 34.4 5.6 51 88-146 247-298 (300)
169 3k3o_A PHF8, PHD finger protei 76.8 2.2 7.4E-05 37.6 4.1 54 83-136 162-242 (371)
170 3pua_A GRC5, PHD finger protei 76.6 2.2 7.5E-05 37.8 4.1 28 109-136 242-269 (392)
171 2yu1_A JMJC domain-containing 76.6 3.3 0.00011 37.3 5.2 28 109-136 264-291 (451)
172 1j1l_A Pirin; beta sandwich, c 76.4 8.1 0.00028 32.5 7.4 63 81-147 53-119 (290)
173 1pmi_A PMI, phosphomannose iso 74.9 1.7 5.7E-05 38.9 2.9 23 112-134 267-289 (440)
174 3loi_A Putative uncharacterize 74.7 12 0.00042 29.4 7.6 88 80-171 65-163 (172)
175 3pur_A Lysine-specific demethy 73.9 2.7 9.2E-05 38.7 4.0 29 108-136 363-391 (528)
176 3kv5_D JMJC domain-containing 72.3 3.2 0.00011 37.6 4.1 55 82-136 280-361 (488)
177 2qdr_A Uncharacterized protein 71.0 3 0.0001 35.5 3.3 37 83-129 106-143 (303)
178 3kv9_A JMJC domain-containing 70.8 3.7 0.00013 36.4 4.1 55 82-136 189-270 (397)
179 2ypd_A Probable JMJC domain-co 70.6 4.8 0.00016 35.7 4.7 39 111-149 293-331 (392)
180 2wfp_A Mannose-6-phosphate iso 69.9 3 0.0001 36.6 3.3 53 85-145 339-391 (394)
181 3avr_A Lysine-specific demethy 69.7 5.2 0.00018 36.8 4.9 42 110-153 337-378 (531)
182 2pqq_A Putative transcriptiona 69.4 12 0.00042 25.8 6.0 57 89-145 47-107 (149)
183 1pmi_A PMI, phosphomannose iso 68.8 10 0.00035 33.7 6.6 58 87-146 378-438 (440)
184 2qdr_A Uncharacterized protein 68.0 6.7 0.00023 33.4 4.8 30 85-130 235-264 (303)
185 4ask_A Lysine-specific demethy 66.9 6.5 0.00022 36.0 4.9 27 109-135 311-337 (510)
186 3dn7_A Cyclic nucleotide bindi 63.0 14 0.0005 27.1 5.6 86 44-144 19-109 (194)
187 3mdp_A Cyclic nucleotide-bindi 63.0 12 0.00041 25.7 4.8 86 44-144 18-110 (142)
188 3g7d_A PHPD; non heme Fe(II) d 62.7 23 0.00079 31.3 7.3 50 92-144 358-407 (443)
189 3dv8_A Transcriptional regulat 60.3 26 0.00091 26.0 6.7 86 44-144 15-106 (220)
190 3b02_A Transcriptional regulat 59.1 22 0.00076 26.2 6.0 56 89-144 18-76 (195)
191 2fmy_A COOA, carbon monoxide o 58.8 33 0.0011 25.6 7.1 34 89-123 46-80 (220)
192 3idb_B CAMP-dependent protein 56.8 38 0.0013 24.0 6.8 34 88-122 79-113 (161)
193 1ft9_A Carbon monoxide oxidati 56.4 37 0.0013 25.5 7.0 34 88-122 41-75 (222)
194 3iwz_A CAP-like, catabolite ac 55.3 31 0.0011 25.8 6.4 66 42-122 21-87 (230)
195 1znp_A Hypothetical protein AT 54.7 43 0.0015 25.8 7.0 73 53-135 35-115 (154)
196 2oz6_A Virulence factor regula 54.3 27 0.00091 25.7 5.7 34 89-122 32-66 (207)
197 3gyd_A CNMP-BD protein, cyclic 52.1 32 0.0011 25.5 5.9 63 44-121 51-114 (187)
198 3ryp_A Catabolite gene activat 52.0 31 0.0011 25.4 5.8 34 89-122 38-72 (210)
199 2qfe_A Calpain-7; C2-like doma 51.1 14 0.00047 27.9 3.6 33 112-149 109-141 (148)
200 3fx3_A Cyclic nucleotide-bindi 50.8 32 0.0011 26.0 5.8 63 44-121 23-86 (237)
201 3m3i_A Putative uncharacterize 50.6 46 0.0016 27.3 6.9 103 23-135 15-162 (225)
202 3i3q_A Alpha-ketoglutarate-dep 50.5 16 0.00056 29.2 4.2 40 92-131 135-176 (211)
203 4ev0_A Transcription regulator 50.2 29 0.001 25.7 5.4 56 89-144 41-100 (216)
204 3d0s_A Transcriptional regulat 48.7 35 0.0012 25.6 5.7 57 89-145 48-108 (227)
205 2opw_A Phyhd1 protein; double- 48.3 22 0.00075 28.5 4.7 40 109-148 226-268 (291)
206 3e97_A Transcriptional regulat 47.9 47 0.0016 24.9 6.4 64 44-122 18-82 (231)
207 2bgc_A PRFA; bacterial infecti 47.2 36 0.0012 26.0 5.6 36 89-124 37-72 (238)
208 2a1x_A Phytanoyl-COA dioxygena 47.0 27 0.00092 28.4 5.1 46 108-153 213-261 (308)
209 1o5l_A Transcriptional regulat 46.9 30 0.001 25.9 5.0 33 89-121 41-74 (213)
210 3kcc_A Catabolite gene activat 46.7 38 0.0013 26.4 5.8 64 44-122 58-122 (260)
211 2zcw_A TTHA1359, transcription 44.7 37 0.0013 25.0 5.2 56 89-144 26-84 (202)
212 1uhe_A Aspartate 1-decarboxyla 42.8 2.5 8.6E-05 30.6 -1.6 30 92-125 32-63 (97)
213 3la7_A Global nitrogen regulat 42.6 43 0.0015 25.7 5.4 33 89-121 62-95 (243)
214 2z69_A DNR protein; beta barre 42.4 16 0.00056 25.4 2.7 63 44-121 24-87 (154)
215 4ava_A Lysine acetyltransferas 42.2 41 0.0014 27.1 5.4 79 26-121 9-87 (333)
216 1zyb_A Transcription regulator 42.2 35 0.0012 25.9 4.8 66 44-122 30-96 (232)
217 3tht_A Alkylated DNA repair pr 42.0 23 0.0008 30.4 4.0 38 93-130 228-265 (345)
218 2rdq_A 1-deoxypentalenic acid 41.8 28 0.00097 27.7 4.4 41 108-148 208-254 (288)
219 2ptm_A Hyperpolarization-activ 41.6 37 0.0013 25.1 4.8 31 88-121 112-142 (198)
220 3e6c_C CPRK, cyclic nucleotide 41.4 48 0.0016 25.4 5.5 34 89-122 51-85 (250)
221 3dxt_A JMJC domain-containing 41.1 35 0.0012 29.8 5.0 46 109-156 260-305 (354)
222 3pna_A CAMP-dependent protein 39.4 50 0.0017 23.2 5.0 31 88-122 79-109 (154)
223 2d93_A RAP guanine nucleotide 38.8 54 0.0019 22.3 5.0 52 89-144 59-114 (134)
224 2qjv_A Uncharacterized IOLB-li 38.7 1.5E+02 0.005 24.7 8.4 70 54-136 25-102 (270)
225 2lj0_A Sorbin and SH3 domain-c 38.6 15 0.00052 23.7 1.8 36 113-155 23-58 (65)
226 1yll_A PA5104, conserved hypot 38.3 39 0.0013 26.9 4.5 56 86-145 138-196 (200)
227 2ox0_A JMJC domain-containing 36.6 43 0.0015 29.4 5.0 44 109-154 278-321 (381)
228 2gau_A Transcriptional regulat 36.4 38 0.0013 25.5 4.1 63 44-121 22-85 (232)
229 2qcs_B CAMP-dependent protein 34.0 73 0.0025 24.8 5.6 33 89-121 199-233 (291)
230 2lkt_A Retinoic acid receptor 33.4 27 0.00094 25.0 2.7 27 114-140 7-34 (125)
231 2fct_A Syringomycin biosynthes 33.1 41 0.0014 27.3 4.0 40 109-148 218-262 (313)
232 2iuw_A Alkylated repair protei 33.1 50 0.0017 26.5 4.5 37 93-129 159-205 (238)
233 4f8a_A Potassium voltage-gated 31.1 97 0.0033 21.4 5.4 61 44-123 39-99 (160)
234 3opt_A DNA damage-responsive t 29.3 66 0.0022 28.2 4.8 49 109-159 303-351 (373)
235 3bpz_A Potassium/sodium hyperp 28.4 55 0.0019 24.2 3.8 53 89-145 114-169 (202)
236 3shr_A CGMP-dependent protein 27.8 1E+02 0.0036 24.0 5.6 57 89-145 199-260 (299)
237 1o7f_A CAMP-dependent RAP1 gua 27.8 1E+02 0.0034 26.0 5.8 56 89-144 84-144 (469)
238 1vc3_B L-aspartate-alpha-decar 26.4 7 0.00024 28.1 -1.6 29 92-124 33-64 (96)
239 2j05_A RAS GTPase-activating p 26.1 29 0.001 21.6 1.6 12 113-124 23-34 (65)
240 1tq5_A Protein YHHW; bicupin, 25.4 1.8E+02 0.006 23.4 6.5 37 91-136 184-220 (242)
241 3s57_A Alpha-ketoglutarate-dep 25.0 56 0.0019 25.6 3.4 38 92-129 132-178 (204)
242 3gja_A CYTC3; halogenase, beta 24.6 48 0.0017 27.5 3.1 40 109-148 220-264 (319)
243 2inu_A Insulin fructotransfera 24.4 20 0.0007 31.8 0.7 15 115-129 54-68 (410)
244 1vp6_A CNBD, cyclic-nucleotide 24.4 57 0.002 22.1 3.0 28 88-121 52-79 (138)
245 3oug_A Aspartate 1-decarboxyla 24.4 10 0.00035 28.1 -1.0 57 45-124 32-91 (114)
246 3rnj_A Brain-specific angiogen 24.3 31 0.0011 21.5 1.5 37 113-155 25-61 (67)
247 2fpe_A C-JUN-amino-terminal ki 24.3 24 0.00083 21.7 0.9 35 113-154 20-54 (62)
248 3ocp_A PRKG1 protein; serine/t 24.3 1.1E+02 0.0037 20.8 4.5 60 44-122 35-94 (139)
249 3plx_B Aspartate 1-decarboxyla 23.0 9 0.00031 27.9 -1.5 30 92-125 33-64 (102)
250 2vec_A YHAK, pirin-like protei 22.4 1.6E+02 0.0053 24.1 5.7 43 90-136 204-246 (256)
251 3dkw_A DNR protein; CRP-FNR, H 21.3 26 0.00091 26.1 0.7 35 89-123 51-86 (227)
252 4dot_A Group XVI phospholipase 21.0 51 0.0017 24.8 2.3 21 113-133 6-27 (140)
253 1wgp_A Probable cyclic nucleot 20.9 17 0.00057 25.0 -0.5 32 89-121 48-82 (137)
No 1
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=100.00 E-value=6.3e-54 Score=351.02 Aligned_cols=171 Identities=57% Similarity=1.032 Sum_probs=164.9
Q ss_pred CeEEEEecCCCCCCCCCCCcCCCCCcCCHhhhhhhcCeeEEee------ChHHHHHHHHhcCCCeeeEEEEcCCCCCCHH
Q psy840 1 MVRVWYMDTDVKSDQRLEHHRTPKEYLDLQTLNKLTGVEYFNV------QDEVLTKLRKDRNYNYEDEITCSKDCLPNYE 74 (178)
Q Consensus 1 m~~aw~~d~~~~~d~r~ph~~~p~~~v~~~~L~~~lGv~~~~~------~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e 74 (178)
||+|||||+. ++|||+||+++|+++||+++| +++||+||++ .+.+|++|++++||.+.|+++++++++|||+
T Consensus 13 ~~~~~~~~~~-~~d~~~ph~~~~~~~v~~~~L-~~~GV~~w~~~~~~~~~~~~l~~l~~~~gy~~~D~v~~~p~~~p~~~ 90 (191)
T 1vr3_A 13 MVQAWYMDES-TADPRKPHRAQPDRPVSLEQL-RTLGVLYWKLDADKYENDPELEKIRKMRNYSWMDIITICKDTLPNYE 90 (191)
T ss_dssp CCEEEEBCSC-CSCTTSCCBCSSCCBCCHHHH-HHTTCEEEECCGGGTTSCHHHHHHHHHHTCCEEEEEEESTTTSTTHH
T ss_pred hheeeeccCC-ccccCcccccCCCCccCHHHH-HhcCcEEEECCCccccccHHHHHHHHhcCCCceeEEEECCCcCcchh
Confidence 8999999998 899999999999999999999 9999999999 3567999999999999999999998679999
Q ss_pred HHhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCCceeec
Q psy840 75 EKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEPVWTPH 154 (178)
Q Consensus 75 ~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~gW~~~ 154 (178)
+|+..|+.+|+|+++|++||++|+|+|.+++++|+|+++.|++||+|+||+|++|||+++++++++|||||.+++||+|+
T Consensus 91 ~k~~~~~~~H~H~~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~~~~airlF~~~~~W~~~ 170 (191)
T 1vr3_A 91 EKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTPY 170 (191)
T ss_dssp HHHHHHHSCEECSSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTCCEEEEEEESSSCCCCCE
T ss_pred hhhccCCcceECCcceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCCCEEEEEEECCCCCccCC
Confidence 99999999999999999999999999999987788999999999999999999999999999999999999999999999
Q ss_pred CCCCCchHHHHHHHHHHhh
Q psy840 155 NRPADDMECRLEYLKKIQN 173 (178)
Q Consensus 155 ~r~~d~~~~r~~yl~~~~~ 173 (178)
+|++|++++|++||++|+.
T Consensus 171 ~r~~~~~~~r~~y~~~~~~ 189 (191)
T 1vr3_A 171 NRPADHFDARVQYMSFLEG 189 (191)
T ss_dssp ESCCTTSHHHHHHHHHHHH
T ss_pred CCchhccHHHHHHHHHhhh
Confidence 9999999999999999874
No 2
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=100.00 E-value=1e-35 Score=240.80 Aligned_cols=150 Identities=25% Similarity=0.387 Sum_probs=133.6
Q ss_pred CCCCCCcCCCCCcCCHhhhhhhcCeeE--Eee----------------ChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHH
Q psy840 14 DQRLEHHRTPKEYLDLQTLNKLTGVEY--FNV----------------QDEVLTKLRKDRNYNYEDEITCSKDCLPNYEE 75 (178)
Q Consensus 14 d~r~ph~~~p~~~v~~~~L~~~lGv~~--~~~----------------~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~ 75 (178)
++..|.....+...+.++| +++||+| |++ ++++|++|++++||.+.|++++++++ |++++
T Consensus 10 ~~~~~~~~~~~~~~i~~~L-~~~gV~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~l~~~~gy~~~D~i~~~~~~-p~~~~ 87 (179)
T 1zrr_A 10 DPQNSLWHSTNAEEIQQQL-NAKGVRFERWQADRDLGAAPTAETVIAAYQHAIDKLVAEKGYQSWDVISLRADN-PQKEA 87 (179)
T ss_dssp CSSCEEEEECCSHHHHHHH-HHTTCCCCCCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHCCSEEEEECCCTTC-THHHH
T ss_pred CcCCcceeeCCHHHHHHHH-HHcCcEEEEcCCCCccCCcccHHHHHHHHHHHHHHHHHHhCCCcccEEEEcCCC-CChhH
Confidence 3345554455678889999 9999999 654 12469999999999999999999885 99999
Q ss_pred HhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCCceeecC
Q psy840 76 KLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEPVWTPHN 155 (178)
Q Consensus 76 ~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~gW~~~~ 155 (178)
|++.|+.+|+|+++|++||++|+|+|.++ .+|+|+++.|++||+|+||+|++|||+++++++++|||+|.+++||++++
T Consensus 88 ~~~~~~~~H~H~~~Ei~~Vl~G~g~~~i~-~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~~~w~~~~ 166 (179)
T 1zrr_A 88 LREKFLNEHTHGEDEVRFFVEGAGLFCLH-IGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNPEGWIAQF 166 (179)
T ss_dssp HHHHHHSCBEESSCEEEEEEESCCCCCEE-CSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCGGGEESCS
T ss_pred hhcccccceECChheEEEEEcceEEEEEE-eCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCCCCccccC
Confidence 99999999999999999999999999998 46889999999999999999999999999999999999999999999977
Q ss_pred CCCCchHHHHHH
Q psy840 156 RPADDMECRLEY 167 (178)
Q Consensus 156 r~~d~~~~r~~y 167 (178)
| +++++.|||.
T Consensus 167 ~-g~~ia~~~p~ 177 (179)
T 1zrr_A 167 T-GDDIASAYPR 177 (179)
T ss_dssp S-CCCSGGGSCS
T ss_pred C-CchhHhhCCC
Confidence 6 7888888864
No 3
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.12 E-value=1.6e-10 Score=80.68 Aligned_cols=63 Identities=16% Similarity=0.177 Sum_probs=53.4
Q ss_pred ccceecCc-ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecC
Q psy840 81 YTEHLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGE 148 (178)
Q Consensus 81 ~~eH~H~~-dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~ 148 (178)
..+|.|+. +|+.||++|++.+.+.+ + ...+++||++.+|+|+.|++...++..+..+-++..+
T Consensus 41 ~~~H~H~~~~e~~~v~~G~~~~~~~~---~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~~p~ 104 (105)
T 1v70_A 41 QKVHVHEGSDKVYYALEGEVVVRVGE---E--EALLAPGMAAFAPAGAPHGVRNESASPALLLVVTAPR 104 (105)
T ss_dssp EEEECCSSCEEEEEEEESCEEEEETT---E--EEEECTTCEEEECTTSCEEEECCSSSCEEEEEEEESC
T ss_pred CCccCCCCCcEEEEEEeCEEEEEECC---E--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEeCCC
Confidence 47899996 89999999999999854 3 3899999999999999999988776667777777654
No 4
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.11 E-value=1.9e-10 Score=84.36 Aligned_cols=70 Identities=13% Similarity=0.116 Sum_probs=56.7
Q ss_pred hccceecCc-ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecC-Cceee
Q psy840 80 FYTEHLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGE-PVWTP 153 (178)
Q Consensus 80 f~~eH~H~~-dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~-~gW~~ 153 (178)
...+|.|+. +|++||++|++.+.+.+ ++ .+.+++||++.+|+|+.|++...++..+..+-++... +++.+
T Consensus 51 ~~~~H~H~~~~e~~~Vl~G~~~~~~~~--~~--~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~~p~~~~~~~ 122 (125)
T 3h8u_A 51 EIASHVHPHGQDTWTVISGEAEYHQGN--GI--VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVVAPGNAGFAL 122 (125)
T ss_dssp EECCC-CTTCEEEEEEEECEEEEECST--TC--EEEEETTEEEEECTTCCCEEEECSSSCEEEEEEEESTTCCCCC
T ss_pred cCCcccCCCCeEEEEEEEeEEEEEECC--Ce--EEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEECCCcccchh
Confidence 367999996 99999999999998832 23 3899999999999999999998777778888888764 55554
No 5
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.07 E-value=4.4e-10 Score=81.67 Aligned_cols=66 Identities=9% Similarity=0.103 Sum_probs=55.3
Q ss_pred ccceecCcceEEEEecceEEEEEEeCCCcEEEE-EEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCCce
Q psy840 81 YTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRI-EVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEPVW 151 (178)
Q Consensus 81 ~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri-~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~gW 151 (178)
..+|.|+.+|+.||++|++.+.+.++. . .+++||++.+|+|+.|++...++..+..+-++...+.+
T Consensus 40 ~~~H~H~~~e~~~Vl~G~~~~~i~~~~-----~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~~~~~ 106 (117)
T 2b8m_A 40 MPKHYSNSYVHLIIIKGEMTLTLEDQE-----PHNYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAPHPKK 106 (117)
T ss_dssp CCCEECSSCEEEEEEESEEEEEETTSC-----CEEEETTCEEEECTTCEEEEECCSSSEEEEEEEECSCGGG
T ss_pred CCCEeCCCcEEEEEEeCEEEEEECCEE-----EEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCCCCC
Confidence 568999999999999999999996533 5 99999999999999999998777767777775555543
No 6
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.06 E-value=2.1e-10 Score=84.31 Aligned_cols=63 Identities=17% Similarity=0.197 Sum_probs=52.1
Q ss_pred hccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeec
Q psy840 80 FYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIG 147 (178)
Q Consensus 80 f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~ 147 (178)
...+|.|+.+|+.||++|++.+.+.+ + ...+++||.|.+|+|+.|++...++..+..+-+|..
T Consensus 48 ~~~~H~H~~~e~~~Vl~G~~~~~i~~---~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~v~p~ 110 (114)
T 3fjs_A 48 QVGSHSVAGPSTIQCLEGEVEIGVDG---A--QRRLHQGDLLYLGAGAAHDVNAITNTSLLVTVVLVD 110 (114)
T ss_dssp EEEEECCSSCEEEEEEESCEEEEETT---E--EEEECTTEEEEECTTCCEEEEESSSEEEEEEEECC-
T ss_pred ccCceeCCCcEEEEEEECEEEEEECC---E--EEEECCCCEEEECCCCcEEEEeCCCcEEEEEEEeCC
Confidence 36789999999999999999999954 3 389999999999999999999887655555555544
No 7
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.05 E-value=1e-09 Score=87.82 Aligned_cols=68 Identities=18% Similarity=0.203 Sum_probs=58.6
Q ss_pred ccceecCc---ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecC
Q psy840 81 YTEHLHTD---EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGE 148 (178)
Q Consensus 81 ~~eH~H~~---dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~ 148 (178)
...|.|+. +|++||++|++.+.+.++.++++.+.+++||+|++|+|+.|++...++..++.+-++...
T Consensus 86 ~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 86 TKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYPAD 156 (190)
T ss_dssp CCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSSSCEEEEEEEETT
T ss_pred CCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCcccEEEEEEECCC
Confidence 45788873 799999999999999987788889999999999999999999988777667777776654
No 8
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.01 E-value=6.2e-10 Score=81.58 Aligned_cols=61 Identities=20% Similarity=0.262 Sum_probs=52.4
Q ss_pred ccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeec
Q psy840 81 YTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIG 147 (178)
Q Consensus 81 ~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~ 147 (178)
..+|.|+.+|+.||++|++.+.+.+ + ...+++||++.+|+|+.|++...++ ....+-+|..
T Consensus 54 ~~~H~H~~~e~~~vl~G~~~~~~~~---~--~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~v~~p 114 (126)
T 4e2g_A 54 MPAHEHPHEQAGVMLEGTLELTIGE---E--TRVLRPGMAYTIPGGVRHRARTFED-GCLVLDIFSP 114 (126)
T ss_dssp EEEECCSSEEEEEEEEECEEEEETT---E--EEEECTTEEEEECTTCCEEEECCTT-CEEEEEEEES
T ss_pred CCCccCCCceEEEEEEeEEEEEECC---E--EEEeCCCCEEEECCCCcEEeEECCC-CEEEEEEECC
Confidence 5789999999999999999999954 3 3899999999999999999998766 5667777764
No 9
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=98.99 E-value=8.9e-10 Score=81.74 Aligned_cols=63 Identities=22% Similarity=0.159 Sum_probs=53.1
Q ss_pred ccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecC
Q psy840 81 YTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGE 148 (178)
Q Consensus 81 ~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~ 148 (178)
+..|.|+..|+.||++|++.+.+.++ ...+++||++.+|+|+.|++...++..+..+-++..+
T Consensus 61 ~~~H~H~~~e~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~v~~~~ 123 (126)
T 1vj2_A 61 IDRHSHPWEHEIFVLKGKLTVLKEQG-----EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLIPKE 123 (126)
T ss_dssp EEEECCSSCEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTCCEEEECCSSSCEEEEEEEEGG
T ss_pred CCceeCCCcEEEEEEEeEEEEEECCE-----EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 56999999999999999999999653 2899999999999999999988766666666666544
No 10
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=98.98 E-value=1.1e-09 Score=77.76 Aligned_cols=62 Identities=21% Similarity=0.259 Sum_probs=52.2
Q ss_pred ccce--ecC-cceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeec
Q psy840 81 YTEH--LHT-DEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIG 147 (178)
Q Consensus 81 ~~eH--~H~-~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~ 147 (178)
..+| .|+ .+|+.||++|++.+.+.+ + ...+++||++.+|+|+.|++...++..+..+-++..
T Consensus 34 ~~~h~~~H~~~~e~~~vl~G~~~~~~~~---~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~~ 98 (113)
T 2gu9_A 34 EGGPDNRHRGADQWLFVVDGAGEAIVDG---H--TQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYHP 98 (113)
T ss_dssp EECCCSSSCCCEEEEEEEECCEEEEETT---E--EEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEES
T ss_pred cCCcccccCCCcEEEEEEeCEEEEEECC---E--EEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECC
Confidence 4567 999 699999999999999954 3 389999999999999999999877666777777655
No 11
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=98.97 E-value=3.7e-09 Score=80.55 Aligned_cols=68 Identities=22% Similarity=0.292 Sum_probs=56.3
Q ss_pred ccceecCc-ceEEEEecceEEEEEEeCCC-cEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecC
Q psy840 81 YTEHLHTD-EEIRLVLDGSGYFDVRDKFD-DWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGE 148 (178)
Q Consensus 81 ~~eH~H~~-dEi~~il~G~g~f~v~~~~d-~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~ 148 (178)
..+|.|+. +|+.||++|++.+.+.++.+ .++++.+++||+|.+|+|+.|++...++..+..+-++...
T Consensus 56 ~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i~~~~ 125 (148)
T 2oa2_A 56 IGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSIYAPP 125 (148)
T ss_dssp CCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEEEESC
T ss_pred cCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEEEECCC
Confidence 57899986 79999999999999987542 2456899999999999999999998776667777776653
No 12
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=98.96 E-value=3.1e-09 Score=81.70 Aligned_cols=68 Identities=22% Similarity=0.234 Sum_probs=57.5
Q ss_pred ccceec-CcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCC-CeeeeecCCCCcEEEEEEeecCCceee
Q psy840 81 YTEHLH-TDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAG-IYHRFTLDINNYVKAKRYFIGEPVWTP 153 (178)
Q Consensus 81 ~~eH~H-~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG-~~H~f~~~~~~~~~alrlF~~~~gW~~ 153 (178)
...|.| ..+|+.||++|++.+.+.+ + .+.+++||.+.+|+| +.|++...++..+..+-++...+.-+.
T Consensus 60 ~~~H~H~~~~E~~~Vl~G~~~~~~~~---~--~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~v~~p~~~~~~ 129 (162)
T 3l2h_A 60 TEYHLHHYEEEAVYVLSGKGTLTMEN---D--QYPIAPGDFVGFPCHAAAHSISNDGTETLVCLVIGQRLDQDVV 129 (162)
T ss_dssp SSSBEESSCCEEEEEEESCEEEEETT---E--EEEECTTCEEEECTTSCCEEEECCSSSCEEEEEEEECCSEEEE
T ss_pred CCCccCCCCCEEEEEEEEEEEEEECC---E--EEEeCCCCEEEECCCCceEEeEeCCCCCEEEEEEECCCCCCeE
Confidence 578999 5699999999999999854 3 389999999999998 999999877777888888887765443
No 13
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=98.95 E-value=1.8e-09 Score=79.23 Aligned_cols=62 Identities=27% Similarity=0.390 Sum_probs=51.3
Q ss_pred hccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEee
Q psy840 80 FYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFI 146 (178)
Q Consensus 80 f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~ 146 (178)
....|.|+..|+.||++|++.+.+++ + ...+++||+++||+|+.|++...++..+..+-++-
T Consensus 46 ~~~~H~H~~~Ei~~v~~G~~~~~i~~---~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i~f 107 (128)
T 4i4a_A 46 KSFRHSHNEYELFIVIQGNAIIRIND---E--DFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTIWW 107 (128)
T ss_dssp ECCCBCCSSEEEEEEEESEEEEEETT---E--EEEEETTCEEEECTTCCEEEEECSSSCEEEEEEEE
T ss_pred ccCCEecCCeEEEEEEeCEEEEEECC---E--EEEECCCcEEEECCCCcEEeEeCCCCCEEEEEEEE
Confidence 35799999999999999999999954 3 38999999999999999999887665555554443
No 14
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=98.95 E-value=1.3e-09 Score=80.89 Aligned_cols=79 Identities=19% Similarity=0.142 Sum_probs=57.0
Q ss_pred CCCeeeEEEEcCCCCCCHHHHhhhhccceecCc-ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecC
Q psy840 56 NYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLD 134 (178)
Q Consensus 56 gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~-dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~ 134 (178)
|....-++.+... |+ ....+|.|+. +|+.||++|++.+.+.+ ++ .+.+++||++++|+|+.|++...
T Consensus 39 g~~~~~~~~~~~~--~g------~~~~~H~H~~~~E~~~vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~g~~H~~~~~ 106 (134)
T 2o8q_A 39 GMFGAHVIRAIPG--KE------AKPTWHTHTVGFQLFYVLRGWVEFEYED--IG--AVMLEAGGSAFQPPGVRHRELRH 106 (134)
T ss_dssp TSCEEEEEEECC-------------CCCEEECCSCEEEEEEESEEEEEETT--TE--EEEEETTCEEECCTTCCEEEEEE
T ss_pred CceEEEEEEEecC--CC------CCCCCEECCCCcEEEEEEeCEEEEEECC--cE--EEEecCCCEEEECCCCcEEeEeC
Confidence 4444457776542 21 2357999998 99999999999999964 13 38999999999999999999885
Q ss_pred CCCcEEEEEEeec
Q psy840 135 INNYVKAKRYFIG 147 (178)
Q Consensus 135 ~~~~~~alrlF~~ 147 (178)
++. .+.+-++..
T Consensus 107 ~~~-~~~l~~~~p 118 (134)
T 2o8q_A 107 SDD-LEVLEIVSP 118 (134)
T ss_dssp CTT-CEEEEEESS
T ss_pred CCC-eEEEEEECC
Confidence 443 355555544
No 15
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=98.95 E-value=7.3e-10 Score=80.15 Aligned_cols=51 Identities=20% Similarity=0.360 Sum_probs=45.0
Q ss_pred ccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCC
Q psy840 81 YTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDIN 136 (178)
Q Consensus 81 ~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~ 136 (178)
...|.|+.+|+.||++|++.+.+.+ + ...+++||+|++|+|+.|++...++
T Consensus 51 ~~~H~h~~~e~~~vl~G~~~~~i~~---~--~~~l~~Gd~i~i~~~~~H~~~~~~~ 101 (114)
T 2ozj_A 51 VSEEEYFGDTLYLILQGEAVITFDD---Q--KIDLVPEDVLMVPAHKIHAIAGKGR 101 (114)
T ss_dssp CCCBCCSSCEEEEEEEEEEEEEETT---E--EEEECTTCEEEECTTCCBEEEEEEE
T ss_pred cccEECCCCeEEEEEeCEEEEEECC---E--EEEecCCCEEEECCCCcEEEEeCCC
Confidence 4689999999999999999999954 3 3899999999999999999987643
No 16
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=98.94 E-value=1.6e-09 Score=78.03 Aligned_cols=89 Identities=17% Similarity=0.209 Sum_probs=63.8
Q ss_pred CCCcCCHhhhhhhc---CeeEEeeChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceE
Q psy840 23 PKEYLDLQTLNKLT---GVEYFNVQDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSG 99 (178)
Q Consensus 23 p~~~v~~~~L~~~l---Gv~~~~~~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g 99 (178)
+...+.++++ ... |+....+. ...++ ..-.+++.++. ...+|.|+.+|+.||++|++
T Consensus 12 ~~~~~~~~~~-~~~~~~~~~~~~l~--------~~~~~-~~~~~~~~~g~----------~~~~H~H~~~e~~~vl~G~~ 71 (115)
T 1yhf_A 12 HAKVLDLTQE-VMIEQDQMLSRTLV--------QRQDL-GITVFSLDKGQ----------EIGRHSSPGDAMVTILSGLA 71 (115)
T ss_dssp SSSCCCHHHH-SCCCTTCEEEEEEE--------EETTE-EEEEEEECTTC----------EEEEECCSSEEEEEEEESEE
T ss_pred ccceEehhhe-eeecCCCeEEEEEE--------eCCce-EEEEEEECCCC----------ccCCEECCCcEEEEEEeCEE
Confidence 3566777777 443 66665541 11222 22344555542 25789999999999999999
Q ss_pred EEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCC
Q psy840 100 YFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDIN 136 (178)
Q Consensus 100 ~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~ 136 (178)
.+.+.+ + ...+++||++.+|+|+.|++...++
T Consensus 72 ~~~~~~---~--~~~l~~Gd~~~ip~~~~H~~~~~~~ 103 (115)
T 1yhf_A 72 EITIDQ---E--TYRVAEGQTIVMPAGIPHALYAVEA 103 (115)
T ss_dssp EEEETT---E--EEEEETTCEEEECTTSCEEEEESSC
T ss_pred EEEECC---E--EEEECCCCEEEECCCCCEEEEECCC
Confidence 999854 3 3899999999999999999988764
No 17
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=98.94 E-value=1.6e-09 Score=78.09 Aligned_cols=60 Identities=18% Similarity=0.166 Sum_probs=50.6
Q ss_pred ccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeec
Q psy840 81 YTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIG 147 (178)
Q Consensus 81 ~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~ 147 (178)
...|.|+.+|+.||++|++.+.+.+ + ...+++||++.+|+|+.|++...++ ...+-+|..
T Consensus 47 ~~~H~H~~~e~~~vl~G~~~~~~~~---~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l~v~~p 106 (116)
T 2pfw_A 47 GYVHAHRHSQVSYVVEGEFHVNVDG---V--IKVLTAGDSFFVPPHVDHGAVCPTG--GILIDTFSP 106 (116)
T ss_dssp EEEECCSSEEEEEEEEECEEEEETT---E--EEEECTTCEEEECTTCCEEEEESSC--EEEEEEEES
T ss_pred CCcEECCcceEEEEEeeEEEEEECC---E--EEEeCCCCEEEECcCCceeeEeCCC--cEEEEEECC
Confidence 5789999999999999999999954 3 3899999999999999999988763 455666654
No 18
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=98.94 E-value=1.6e-09 Score=80.66 Aligned_cols=73 Identities=25% Similarity=0.154 Sum_probs=57.9
Q ss_pred hccceecCcceEEEEecceEEEE--EEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecC-CceeecCC
Q psy840 80 FYTEHLHTDEEIRLVLDGSGYFD--VRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGE-PVWTPHNR 156 (178)
Q Consensus 80 f~~eH~H~~dEi~~il~G~g~f~--v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~-~gW~~~~r 156 (178)
...+|.|+..|+.||++|++.+. +.+ + ...+++||++.+|+|+.|++...++..+..+-++... +....+.+
T Consensus 51 ~~~~H~H~~~e~~~vl~G~~~~~~~~~~---~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~~~~~~~~~~~~~ 125 (145)
T 3ht1_A 51 STPPHFHEWEHEIYVLEGSMGLVLPDQG---R--TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPCERPPVRNVFL 125 (145)
T ss_dssp ECCCEECSSCEEEEEEEECEEEEEGGGT---E--EEEECTTCEEEECTTCCBEEECCTTCCEEEEEEEESCCCCCEESSC
T ss_pred cCCCccCCCceEEEEEEeEEEEEEeECC---E--EEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEECCCCCCeeEEee
Confidence 35799999999999999999999 754 3 3899999999999999999998777667777777654 33444444
Q ss_pred C
Q psy840 157 P 157 (178)
Q Consensus 157 ~ 157 (178)
+
T Consensus 126 ~ 126 (145)
T 3ht1_A 126 S 126 (145)
T ss_dssp C
T ss_pred c
Confidence 3
No 19
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.94 E-value=3.4e-09 Score=85.19 Aligned_cols=56 Identities=20% Similarity=0.273 Sum_probs=48.9
Q ss_pred hhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCC
Q psy840 79 SFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDI 135 (178)
Q Consensus 79 ~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~ 135 (178)
..+.+|.|+.||++|+++|+..+.+++. |+.-.+.+++||+++||+|++|+....+
T Consensus 46 ~r~d~H~h~~dE~FyvlkG~m~i~v~d~-g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 46 HRTDYHDDPLEEFFYQLRGNAYLNLWVD-GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp CCCCEEECSSCEEEEEEESCEEEEEEET-TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred cCccCcCCCCceEEEEEeeEEEEEEEcC-CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 4589999999999999999999999983 4444699999999999999999986554
No 20
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.94 E-value=8.5e-10 Score=77.36 Aligned_cols=50 Identities=28% Similarity=0.575 Sum_probs=45.0
Q ss_pred ccceecCc-ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCC
Q psy840 81 YTEHLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDI 135 (178)
Q Consensus 81 ~~eH~H~~-dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~ 135 (178)
+.+|.|+. +|+.||++|++.+.+.++ ...+++||+++||+|+.|++...+
T Consensus 42 ~~~H~H~~~~e~~~v~~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~ 92 (102)
T 3d82_A 42 FVWHEHADTDEVFIVMEGTLQIAFRDQ-----NITLQAGEMYVIPKGVEHKPMAKE 92 (102)
T ss_dssp CCCBCCTTCCEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTCCBEEEEEE
T ss_pred CCceeCCCCcEEEEEEeCEEEEEECCE-----EEEEcCCCEEEECCCCeEeeEcCC
Confidence 67999998 999999999999999653 389999999999999999998764
No 21
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=98.93 E-value=4.8e-09 Score=84.30 Aligned_cols=68 Identities=19% Similarity=0.250 Sum_probs=57.8
Q ss_pred ccceecCc-ceEEEEecceEEEEEEeCC---CcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecC
Q psy840 81 YTEHLHTD-EEIRLVLDGSGYFDVRDKF---DDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGE 148 (178)
Q Consensus 81 ~~eH~H~~-dEi~~il~G~g~f~v~~~~---d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~ 148 (178)
...|.|+. +|+.||++|++.+.+.+.+ ++.+...+++||++++|+|+.|++...++..+..+-+|..+
T Consensus 85 ~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~ 156 (201)
T 1fi2_A 85 NPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQ 156 (201)
T ss_dssp EEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSS
T ss_pred CCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCC
Confidence 57999997 7999999999999997543 67667899999999999999999987666677777777654
No 22
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=98.92 E-value=2.8e-09 Score=82.20 Aligned_cols=69 Identities=19% Similarity=0.133 Sum_probs=55.5
Q ss_pred ccceecCcceEEEEecceEEEEEEeCC----CcEEEEEEeCCcEEEeCCCCeeeeecCC-CCcEEEEEEeecCC
Q psy840 81 YTEHLHTDEEIRLVLDGSGYFDVRDKF----DDWIRIEVTKGDLIIIPAGIYHRFTLDI-NNYVKAKRYFIGEP 149 (178)
Q Consensus 81 ~~eH~H~~dEi~~il~G~g~f~v~~~~----d~~~ri~~~~GDli~vPaG~~H~f~~~~-~~~~~alrlF~~~~ 149 (178)
...|.|+.+|+.||++|++.+.+.+.+ ++.-++.+++||++.||+|+.|++...+ +..+..+-++...+
T Consensus 54 ~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~~ 127 (163)
T 1lr5_A 54 TPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISRPP 127 (163)
T ss_dssp CCEEEESSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEEEEEEEESSS
T ss_pred CCCeECCCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEEEEEEECCCC
Confidence 478999999999999999999997621 1112489999999999999999998876 66677777766543
No 23
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=98.92 E-value=4.2e-09 Score=82.68 Aligned_cols=64 Identities=16% Similarity=0.142 Sum_probs=54.6
Q ss_pred hccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCC-CCcEEEEEEeecC
Q psy840 80 FYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDI-NNYVKAKRYFIGE 148 (178)
Q Consensus 80 f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~-~~~~~alrlF~~~ 148 (178)
....|.|+.+|+.||++|++.+.+.+ + ...+++||+|.||+|+.|++...+ +..+..+-++...
T Consensus 68 ~~~~H~H~~~E~~~Vl~G~~~~~i~~---~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 68 YTTLERHEHTHVVMVVRGHAEVVLDD---R--VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp BCCCBBCSSCEEEEEEESEEEEEETT---E--EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred CCCCccCCCcEEEEEEeCEEEEEECC---E--EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 35789999999999999999999954 3 389999999999999999998876 6667777777654
No 24
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=98.90 E-value=1.2e-09 Score=78.33 Aligned_cols=51 Identities=20% Similarity=0.447 Sum_probs=42.6
Q ss_pred ccceecCc-ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCC
Q psy840 81 YTEHLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDI 135 (178)
Q Consensus 81 ~~eH~H~~-dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~ 135 (178)
+.+|.|+. +|+.||++|++.+.+.+ ++ .+.+++||.+++|+|+.|++...+
T Consensus 40 ~~~H~H~~~~E~~~Vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~~~~H~~~~~~ 91 (107)
T 2i45_A 40 YGWHTHGYSDKVLFAVEGDMAVDFAD--GG--SMTIREGEMAVVPKSVSHRPRSEN 91 (107)
T ss_dssp CCCBCC--CCEEEEESSSCEEEEETT--SC--EEEECTTEEEEECTTCCEEEEEEE
T ss_pred CcceeCCCCCEEEEEEeCEEEEEECC--Cc--EEEECCCCEEEECCCCcEeeEeCC
Confidence 35899998 99999999999999965 13 389999999999999999998753
No 25
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=98.89 E-value=2.6e-09 Score=83.36 Aligned_cols=65 Identities=20% Similarity=0.265 Sum_probs=56.3
Q ss_pred ccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCCc
Q psy840 81 YTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEPV 150 (178)
Q Consensus 81 ~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~g 150 (178)
...|.|+.+|+.||++|++.+.+.+ + ...+++||+|.||+|+.|.+...++..+..+.++..+..
T Consensus 57 ~~~H~H~~~E~~~Vl~G~~~v~v~g---~--~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~~d 121 (156)
T 3kgz_A 57 STLERHAHVHAVMIHRGHGQCLVGE---T--ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVNAARD 121 (156)
T ss_dssp CCCBBCSSCEEEEEEEEEEEEEETT---E--EEEEETTCEEEECTTCCEEEECCSSSCEEEEEEEESSCC
T ss_pred cCceeCCCcEEEEEEeCEEEEEECC---E--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEeCCCC
Confidence 5789999999999999999999954 3 389999999999999999999877777888888776553
No 26
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=98.89 E-value=3.4e-09 Score=75.18 Aligned_cols=63 Identities=22% Similarity=0.278 Sum_probs=51.1
Q ss_pred hccceecCc-ceE-EEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecC
Q psy840 80 FYTEHLHTD-EEI-RLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGE 148 (178)
Q Consensus 80 f~~eH~H~~-dEi-~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~ 148 (178)
...+|.|+. .|+ .||++|++.+.+.+ |+ ...+++||++.+|+|+.|++...++ ...+-+|..+
T Consensus 45 ~~~~H~H~~~~e~~~~vl~G~~~~~~~~--~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l~~~~p~ 109 (110)
T 2q30_A 45 ELPVHSHNIEGELNIVVLEGEGEFVGDG--DA--VIPAPRGAVLVAPISTPHGVRAVTD--MKVLVTIAPP 109 (110)
T ss_dssp EEEEECCSSSCEEEEEEEESCEEEECGG--GC--EEEECTTEEEEEETTSCEEEEESSS--EEEEEEEESC
T ss_pred cCCcccCCCCccEEEEEEeCEEEEEeCC--CE--EEEECCCCEEEeCCCCcEEEEEcCC--cEEEEEECCC
Confidence 357899996 688 89999999999862 22 3899999999999999999988765 4566677654
No 27
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=98.89 E-value=6.4e-09 Score=81.13 Aligned_cols=63 Identities=21% Similarity=0.243 Sum_probs=53.4
Q ss_pred cceecCc-ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCC--CeeeeecCCCCcEEEEEEeecCC
Q psy840 82 TEHLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAG--IYHRFTLDINNYVKAKRYFIGEP 149 (178)
Q Consensus 82 ~eH~H~~-dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG--~~H~f~~~~~~~~~alrlF~~~~ 149 (178)
..|.|.. +|+.||++|++.+.+.+ + .+.+++||+|.+|+| +.|++...++..++.+-++...+
T Consensus 58 ~~H~H~~~eE~~~Vl~G~~~~~~~~---~--~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l~v~~p~~ 123 (163)
T 3i7d_A 58 LRHYHMEQDEFVMVTEGALVLVDDQ---G--EHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFLVVGTRTP 123 (163)
T ss_dssp SSEEESSCCEEEEEEESCEEEEETT---E--EEEECTTCEEEECTTCCCCBEEECCSSSCEEEEEEEECCS
T ss_pred CCccCCCCcEEEEEEECEEEEEECC---E--EEEeCCCCEEEECCCCCcceEEEECCCCCEEEEEEECCCC
Confidence 6899998 79999999999999964 3 389999999999999 99999987766677776665543
No 28
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=98.85 E-value=6.5e-09 Score=86.18 Aligned_cols=65 Identities=23% Similarity=0.264 Sum_probs=56.1
Q ss_pred hccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCC
Q psy840 80 FYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEP 149 (178)
Q Consensus 80 f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~ 149 (178)
.+++|.|+.||++|||+|++.|.+.+ ++| ..+++||.|.+|+|+.|+.++.+ ..+.++-+..+.+
T Consensus 144 ~yP~HsHp~EEiy~VLsG~~e~~v~~--g~~--~~l~pGd~v~ipsgv~Ha~rt~d-ePllalwvW~G~~ 208 (217)
T 4b29_A 144 DYGWHEHLPEELYSVVSGRALFHLRN--APD--LMLEPGQTRFHPANAPHAMTTLT-DPILTLVLWRGAG 208 (217)
T ss_dssp EEEEEECSSEEEEEEEEECEEEEETT--SCC--EEECTTCEEEECTTCCEEEECCS-SCEEEEEEEESTT
T ss_pred cCCCCCCCCceEEEEEeCCEEEEECC--CCE--EecCCCCEEEcCCCCceeEEECC-ccEEEEEEEeCCC
Confidence 59999999999999999999999963 444 89999999999999999999654 5677887777755
No 29
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=98.85 E-value=5.9e-09 Score=82.22 Aligned_cols=65 Identities=22% Similarity=0.197 Sum_probs=55.3
Q ss_pred hccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCC
Q psy840 80 FYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEP 149 (178)
Q Consensus 80 f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~ 149 (178)
....|.|+.+|+.||++|++.+.+.+ + ...+++||+|.||+|+.|++...++..+..+-++..+.
T Consensus 65 ~~~~H~H~~~E~~~Vl~G~~~~~v~g---~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~~~~~ 129 (166)
T 3jzv_A 65 HSTLERHQHAHGVMILKGRGHAMVGR---A--VSAVAPYDLVTIPGWSWHQFRAPADEALGFLCMVNAER 129 (166)
T ss_dssp ECCCBBCSSCEEEEEEEECEEEEETT---E--EEEECTTCEEEECTTCCEEEECCTTSCEEEEEEEESSC
T ss_pred ccCceeCCCcEEEEEEeCEEEEEECC---E--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEccCC
Confidence 35789999999999999999999854 3 38999999999999999999887777777777776643
No 30
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=98.85 E-value=3.8e-09 Score=78.94 Aligned_cols=64 Identities=17% Similarity=0.352 Sum_probs=46.9
Q ss_pred ccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCCceee
Q psy840 81 YTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEPVWTP 153 (178)
Q Consensus 81 ~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~gW~~ 153 (178)
+.+|. +.+|+.||++|++.+.+. |+ .+.+++||.|.||+|+.|++...+ ...+.+-+.. |.|..
T Consensus 53 ~~~H~-~~~E~~~Vl~G~~~~~~~---g~--~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l~v~~--P~w~~ 116 (119)
T 3lwc_A 53 LTETM-AVDDVMIVLEGRLSVSTD---GE--TVTAGPGEIVYMPKGETVTIRSHE-EGALTAYVTY--PHWRP 116 (119)
T ss_dssp EEEEC-SSEEEEEEEEEEEEEEET---TE--EEEECTTCEEEECTTCEEEEEEEE-EEEEEEEEEE--CC---
T ss_pred cCccC-CCCEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCEEEEEcCC-CCeEEEEEEC--CCCcc
Confidence 45675 669999999999999994 33 389999999999999999998764 3444444433 44864
No 31
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.83 E-value=1.1e-08 Score=78.28 Aligned_cols=63 Identities=22% Similarity=0.295 Sum_probs=53.9
Q ss_pred ccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeec
Q psy840 81 YTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIG 147 (178)
Q Consensus 81 ~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~ 147 (178)
..+|.|+..|+.||++|++.+.+.++. ...+++||++.+|+|+.|++...++..+..+.++..
T Consensus 61 ~~~H~H~~~E~~~Vl~G~~~~~~~~~~----~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~~ 123 (147)
T 2f4p_A 61 THWHSHPGGQILIVTRGKGFYQERGKP----ARILKKGDVVEIPPNVVHWHGAAPDEELVHIGISTQ 123 (147)
T ss_dssp ECSEECTTCEEEEEEEEEEEEEETTSC----CEEEETTCEEEECTTCCEEEEEBTTBCEEEEEEECC
T ss_pred cCceECCCceEEEEEeCEEEEEECCEE----EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcc
Confidence 468999999999999999999996531 168999999999999999999887777777777765
No 32
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=98.81 E-value=6.2e-09 Score=73.83 Aligned_cols=60 Identities=13% Similarity=0.099 Sum_probs=48.1
Q ss_pred ccceecCcc-eEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEE
Q psy840 81 YTEHLHTDE-EIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKR 143 (178)
Q Consensus 81 ~~eH~H~~d-Ei~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alr 143 (178)
..+|.|+.+ |+.||++|++.+.+.+.. + ...+++||.+.+|+|+.|++.+.++..++.+-
T Consensus 31 ~~~H~H~~~~e~~~Vl~G~~~~~~~~g~-~--~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~ 91 (97)
T 2fqp_A 31 TGWHRHSMDYVVVPMTTGPLLLETPEGS-V--TSQLTRGVSYTRPEGVEHNVINPSDTEFVFVE 91 (97)
T ss_dssp CCSEECCSCEEEEESSCEEEEEEETTEE-E--EEEECTTCCEEECTTCEEEEECCSSSCEEEEE
T ss_pred CCCEECCCCcEEEEEeecEEEEEeCCCC-E--EEEEcCCCEEEeCCCCcccCEeCCCCcEEEEE
Confidence 468999996 699999999999985410 2 37999999999999999999887665555443
No 33
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.80 E-value=7.4e-09 Score=80.59 Aligned_cols=92 Identities=14% Similarity=0.164 Sum_probs=62.4
Q ss_pred hhhccceecCc-ceEEEEecceEEEEEEeCCCc---EEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecC-Ccee
Q psy840 78 KSFYTEHLHTD-EEIRLVLDGSGYFDVRDKFDD---WIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGE-PVWT 152 (178)
Q Consensus 78 ~~f~~eH~H~~-dEi~~il~G~g~f~v~~~~d~---~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~-~gW~ 152 (178)
..+-..|.|++ ||+|++++|++.+.+++.++. --.+.+++|++++||.|+.|+..+.++..+ | |+-+. .|=.
T Consensus 39 ~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~e~~v--L-LiEp~nTGd~ 115 (140)
T 3d0j_A 39 EGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKDTKM--M-YVQDSNCSMD 115 (140)
T ss_dssp TTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTTCEE--E-EEEESCCCGG
T ss_pred ccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCCceEE--E-EEEeCCCCCC
Confidence 44568999997 999999999999999964210 124899999999999999999999877443 2 23222 1111
Q ss_pred ecCCCCCchHHHHHHHHHHhh
Q psy840 153 PHNRPADDMECRLEYLKKIQN 173 (178)
Q Consensus 153 ~~~r~~d~~~~r~~yl~~~~~ 173 (178)
.-.| ......+.+.++++..
T Consensus 116 ~se~-t~~~~~~i~~i~~~~~ 135 (140)
T 3d0j_A 116 NSDF-CDLSKEEIEYIQTNAR 135 (140)
T ss_dssp GEEE-EECCHHHHHHHHHHHH
T ss_pred CCcc-ccCCHHHHHHHHHHHH
Confidence 1011 2344566677776554
No 34
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=98.80 E-value=2e-08 Score=79.14 Aligned_cols=62 Identities=18% Similarity=0.147 Sum_probs=49.5
Q ss_pred ceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecC-CCCcEEEEEEe
Q psy840 83 EHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLD-INNYVKAKRYF 145 (178)
Q Consensus 83 eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~-~~~~~~alrlF 145 (178)
+|.|+.+|+.||++|++.+.+.+ ++..-.+.+++||.+.+|+|+.|++... ++..++.+-++
T Consensus 135 ~h~h~~~E~~~Vl~G~~~~~~~~-~~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~~~~~~l~v~ 197 (198)
T 2bnm_A 135 NSGHAGNEFLFVLEGEIHMKWGD-KENPKEALLPTGASMFVEEHVPHAFTAAKGTGSAKLIAVN 197 (198)
T ss_dssp CCCCSSCEEEEEEESCEEEEESC-TTSCEEEEECTTCEEEECTTCCEEEEESTTSCCEEEEEEE
T ss_pred cccCCCeEEEEEEeeeEEEEECC-cCCcccEEECCCCEEEeCCCCceEEEecCCCCCeEEEEEe
Confidence 79999999999999999999965 1111148999999999999999999876 55555555443
No 35
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.79 E-value=8e-09 Score=84.35 Aligned_cols=72 Identities=17% Similarity=0.145 Sum_probs=58.0
Q ss_pred eeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCc
Q psy840 59 YEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNY 138 (178)
Q Consensus 59 ~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~ 138 (178)
..-++++.++ +....|.|+.+++.||++|++.|.+.++. ..+++||+|++|+|++|.+.+.++
T Consensus 38 ~~~~~~~~~G----------~~~~~h~h~~~~~~~Vl~G~~~~~i~~~~-----~~l~~Gd~~~~p~~~~H~~~a~~~-- 100 (227)
T 3rns_A 38 YISLFSLAKD----------EEITAEAMLGNRYYYCFNGNGEIFIENNK-----KTISNGDFLEITANHNYSIEARDN-- 100 (227)
T ss_dssp EEEEEEECTT----------CEEEECSCSSCEEEEEEESEEEEEESSCE-----EEEETTEEEEECSSCCEEEEESSS--
T ss_pred EEEEEEECCC----------CccCccccCCCEEEEEEeCEEEEEECCEE-----EEECCCCEEEECCCCCEEEEECCC--
Confidence 4456666664 34789999999999999999999996532 899999999999999999998775
Q ss_pred EEEEEEeec
Q psy840 139 VKAKRYFIG 147 (178)
Q Consensus 139 ~~alrlF~~ 147 (178)
++.+-++..
T Consensus 101 ~~~l~i~~~ 109 (227)
T 3rns_A 101 LKLIEIGEK 109 (227)
T ss_dssp EEEEEEEEC
T ss_pred cEEEEEEee
Confidence 555555444
No 36
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.78 E-value=1.4e-08 Score=76.10 Aligned_cols=59 Identities=22% Similarity=0.271 Sum_probs=48.7
Q ss_pred ccceecC-cceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEE
Q psy840 81 YTEHLHT-DEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRY 144 (178)
Q Consensus 81 ~~eH~H~-~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrl 144 (178)
...|.|+ .+|+.||++|++.+.+.+ + ...+++||++.+|+|+.|++...++..+..+-+
T Consensus 70 ~~~H~H~~~~E~~~Vl~G~~~~~i~~---~--~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~v 129 (133)
T 1o4t_A 70 VGLHKHEGEFEIYYILLGEGVFHDNG---K--DVPIKAGDVCFTDSGESHSIENTGNTDLEFLAV 129 (133)
T ss_dssp EEEEECCSEEEEEEEEESEEEEEETT---E--EEEEETTEEEEECTTCEEEEECCSSSCEEEEEE
T ss_pred cCceECCCccEEEEEEeCEEEEEECC---E--EEEeCCCcEEEECCCCcEEeEECCCCCEEEEEE
Confidence 4689998 599999999999999954 3 389999999999999999998876655554433
No 37
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.76 E-value=2.5e-08 Score=73.13 Aligned_cols=62 Identities=16% Similarity=0.091 Sum_probs=48.3
Q ss_pred cceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCC-cEEEEEEee
Q psy840 82 TEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINN-YVKAKRYFI 146 (178)
Q Consensus 82 ~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~-~~~alrlF~ 146 (178)
.+|.|+.+|+.||++|++.+.++++.. ++.+++||.|.||+|+.|++...++. ....+-+|.
T Consensus 47 ~~~~~~~~E~~~Vl~G~~~l~~~~~~~---~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v~~ 109 (112)
T 2opk_A 47 FWYDSPQDEWVMVVSGSAGIECEGDTA---PRVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAVHC 109 (112)
T ss_dssp CCBCCSSEEEEEEEESCEEEEETTCSS---CEEECTTEEEEECTTCCEEEEEECSSSCEEEEEEEE
T ss_pred ccccCCccEEEEEEeCeEEEEECCEEE---EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEE
Confidence 347788899999999999999965321 16899999999999999999776543 444455554
No 38
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.76 E-value=3.5e-08 Score=84.70 Aligned_cols=68 Identities=21% Similarity=0.149 Sum_probs=56.5
Q ss_pred ccceecC-cceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecC
Q psy840 81 YTEHLHT-DEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGE 148 (178)
Q Consensus 81 ~~eH~H~-~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~ 148 (178)
...|.|+ .+|+.||++|++.+.+.+.+|.-....+++||+++||+|+.|++...++..+..+-+|...
T Consensus 65 ~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~ 133 (361)
T 2vqa_A 65 RELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDG 133 (361)
T ss_dssp EEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESST
T ss_pred CCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCC
Confidence 4689999 7999999999999999765553334899999999999999999988776667777676553
No 39
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.76 E-value=1.3e-08 Score=74.23 Aligned_cols=50 Identities=22% Similarity=0.338 Sum_probs=42.7
Q ss_pred cceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCC
Q psy840 82 TEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDIN 136 (178)
Q Consensus 82 ~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~ 136 (178)
.+| |+.+|+.||++|++.+.+.+ |+ .+.+++||.|++|+|+.|++...++
T Consensus 44 ~~h-H~~~E~~~Vl~G~~~~~i~~--g~--~~~l~~GD~i~ip~g~~H~~~n~~~ 93 (101)
T 1o5u_A 44 DWY-YDTNETCYILEGKVEVTTED--GK--KYVIEKGDLVTFPKGLRCRWKVLEP 93 (101)
T ss_dssp EEE-CSSCEEEEEEEEEEEEEETT--CC--EEEEETTCEEEECTTCEEEEEEEEE
T ss_pred ccc-CCceEEEEEEeCEEEEEECC--CC--EEEECCCCEEEECCCCcEEEEeCCC
Confidence 467 88999999999999999952 33 3899999999999999999987553
No 40
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.74 E-value=3.4e-08 Score=79.44 Aligned_cols=57 Identities=21% Similarity=0.269 Sum_probs=49.1
Q ss_pred hhccceecCcceEEEEecceEEEEEEeCCC----cEEEEEEeCCcEEEeCCCCeeeeecCCC
Q psy840 79 SFYTEHLHTDEEIRLVLDGSGYFDVRDKFD----DWIRIEVTKGDLIIIPAGIYHRFTLDIN 136 (178)
Q Consensus 79 ~f~~eH~H~~dEi~~il~G~g~f~v~~~~d----~~~ri~~~~GDli~vPaG~~H~f~~~~~ 136 (178)
..+.+|.|+.||.+|+++|++...+++. | +...+.+++||+++||+|++|+....++
T Consensus 45 ~r~D~H~~~~eE~Fy~lkG~m~l~v~d~-g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~~e 105 (176)
T 1zvf_A 45 ERTDYHINPTPEWFYQKKGSMLLKVVDE-TDAEPKFIDIIINEGDSYLLPGNVPHSPVRFAD 105 (176)
T ss_dssp CCSCEEECSSCEEEEEEESCEEEEEEEC-SSSSCEEEEEEECTTEEEEECTTCCEEEEECTT
T ss_pred cCCcCcCCCCceEEEEEeCEEEEEEEcC-CCcccceeeEEECCCCEEEcCCCCCcCCcccCC
Confidence 4578998899999999999999999983 4 4556999999999999999999865544
No 41
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=98.74 E-value=2.2e-08 Score=73.48 Aligned_cols=60 Identities=20% Similarity=0.335 Sum_probs=48.1
Q ss_pred ceecCcc-eEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeec
Q psy840 83 EHLHTDE-EIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIG 147 (178)
Q Consensus 83 eH~H~~d-Ei~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~ 147 (178)
.|.|+.. +++||++|++.+.+.+ + ...+++||+++||+|+.|++...++..+..+-++..
T Consensus 42 ~H~H~~~e~~~~vl~G~~~~~i~~---~--~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~~i~~~ 102 (125)
T 3cew_A 42 VHSHKQNEEIYGILSGKGFITIDG---E--KIELQAGDWLRIAPDGKRQISAASDSPIGFLCIQVK 102 (125)
T ss_dssp EEEESSEEEEEEEEEEEEEEEETT---E--EEEEETTEEEEECTTCCEEEEEBTTBCEEEEEEEEE
T ss_pred CccCCCceEEEEEEeCEEEEEECC---E--EEEeCCCCEEEECCCCcEEEEcCCCCCEEEEEEEcC
Confidence 7999985 5666999999999954 3 389999999999999999998876555665555544
No 42
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.74 E-value=1.1e-08 Score=81.00 Aligned_cols=59 Identities=24% Similarity=0.277 Sum_probs=49.5
Q ss_pred ccceecCc-ceEEEEec--ceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecC
Q psy840 81 YTEHLHTD-EEIRLVLD--GSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGE 148 (178)
Q Consensus 81 ~~eH~H~~-dEi~~il~--G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~ 148 (178)
...|.|.. +|++||++ |++.|.+.+ + .+.+++||+|+||+|+.|++. + .++.+-++.++
T Consensus 58 ~~~H~H~~~~E~~yVLe~~G~g~v~idg---e--~~~l~~GD~v~IPpg~~H~i~-g---~l~~L~I~~Pp 119 (157)
T 4h7l_A 58 ARTHYHREHQEIYVVLDHAAHATIELNG---Q--SYPLTKLLAISIPPLVRHRIV-G---EATIINIVSPP 119 (157)
T ss_dssp CCCBBCSSCEEEEEEEEECTTCEEEETT---E--EEECCTTEEEEECTTCCEEEE-S---CEEEEEEEESS
T ss_pred ccceECCCCcEEEEEEecCcEEEEEECC---E--EEEeCCCCEEEECCCCeEeeE-C---CEEEEEEECCC
Confidence 47899976 89999999 999999954 3 389999999999999999997 2 47777777653
No 43
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.74 E-value=1.7e-08 Score=83.03 Aligned_cols=63 Identities=17% Similarity=0.143 Sum_probs=55.7
Q ss_pred ccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecC
Q psy840 81 YTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGE 148 (178)
Q Consensus 81 ~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~ 148 (178)
...|.|+.+|+.||++|++.+.+.+ ++ +.+++||.|.+|+|+.|++...++..++.+-+|...
T Consensus 159 ~~~H~H~~~e~~~Vl~G~~~~~i~~---~~--~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~p~ 221 (243)
T 3h7j_A 159 MPFHKHRNEQIGICIGGGYDMTVEG---CT--VEMKFGTAYFCEPREDHGAINRSEKESKSINIFFPP 221 (243)
T ss_dssp EEEECCSSEEEEEECSSCEEEEETT---EE--EEECTTCEEEECTTCCEEEEECSSSCEEEEEEEESC
T ss_pred CCCEeCCCcEEEEEEECEEEEEECC---EE--EEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcCC
Confidence 5789999999999999999999854 33 789999999999999999998877788889998853
No 44
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=98.73 E-value=4.8e-08 Score=77.33 Aligned_cols=65 Identities=25% Similarity=0.323 Sum_probs=52.3
Q ss_pred ccceecCc-ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCC-cEEEEEEeec
Q psy840 81 YTEHLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINN-YVKAKRYFIG 147 (178)
Q Consensus 81 ~~eH~H~~-dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~-~~~alrlF~~ 147 (178)
...| |+. +|+.||++|++.+.+.+.++. ....+++||++++|+|+.|++...++. .++.+-++..
T Consensus 54 ~~pH-h~~a~E~~yVl~G~~~v~v~~~~~~-~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~ 120 (178)
T 1dgw_A 54 LLPH-HSDSDLLVLVLEGQAILVLVNPDGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAIT 120 (178)
T ss_dssp EEEE-EESSEEEEEEEESEEEEEEEETTEE-EEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEEC
T ss_pred ecCc-CCCCCEEEEEEeEEEEEEEEeCCCc-EEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECC
Confidence 5889 765 999999999999999864432 247999999999999999999887654 6776666543
No 45
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.72 E-value=5.1e-08 Score=83.68 Aligned_cols=67 Identities=21% Similarity=0.212 Sum_probs=57.4
Q ss_pred ccceecCc-ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeec
Q psy840 81 YTEHLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIG 147 (178)
Q Consensus 81 ~~eH~H~~-dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~ 147 (178)
...|.|+. +|+.||++|++.+.+.+.+|+...+.+++||++++|+|+.|++...++..++.+-++..
T Consensus 247 ~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~ 314 (361)
T 2vqa_A 247 RQLHWHPNADEWQYVLDGEMDLTVFASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFND 314 (361)
T ss_dssp EEEEECSSCCEEEEEEESCEEEEEECSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESS
T ss_pred cccccCCCCCEEEEEEeCEEEEEEEcCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECC
Confidence 56799998 99999999999999966556645589999999999999999998877767788877765
No 46
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=98.72 E-value=2.1e-08 Score=78.87 Aligned_cols=60 Identities=17% Similarity=0.072 Sum_probs=48.9
Q ss_pred cceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeec
Q psy840 82 TEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIG 147 (178)
Q Consensus 82 ~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~ 147 (178)
..|.|..+|+.||++|++.+.+.+ + ...+++||.|.+|+|+.|++...++..+ .+-++..
T Consensus 120 ~~H~h~~~E~~~Vl~G~~~~~~~~---~--~~~l~~GD~i~i~~~~~H~~~n~~~~~~-~l~v~~~ 179 (192)
T 1y9q_A 120 SPHALGVIEYIHVLEGIMKVFFDE---Q--WHELQQGEHIRFFSDQPHGYAAVTEKAV-FQNIVAY 179 (192)
T ss_dssp CCCSTTCEEEEEEEESCEEEEETT---E--EEEECTTCEEEEECSSSEEEEESSSCEE-EEEEEEC
T ss_pred CCCCCCCEEEEEEEEeEEEEEECC---E--EEEeCCCCEEEEcCCCCeEeECCCCCcE-EEEEEec
Confidence 378888899999999999999954 3 2799999999999999999988665555 5544443
No 47
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.69 E-value=3.5e-08 Score=85.66 Aligned_cols=68 Identities=21% Similarity=0.211 Sum_probs=56.6
Q ss_pred hccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecC
Q psy840 80 FYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGE 148 (178)
Q Consensus 80 f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~ 148 (178)
....|.|+.+|+.||++|++.+.+.+++|+.+...+++||++++|+|+.|++...++ .+..+-+|...
T Consensus 91 ~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~-~~~~~~v~~~~ 158 (385)
T 1j58_A 91 IRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEE-GAEFLLVFDDG 158 (385)
T ss_dssp EEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEEE-EEEEEEEESCT
T ss_pred CCCCccCChheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEEEECCCCeEEEEECCC-CEEEEEEECCC
Confidence 357899999999999999999999887677655699999999999999999987654 35666666543
No 48
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=98.67 E-value=5.4e-08 Score=81.21 Aligned_cols=65 Identities=17% Similarity=0.123 Sum_probs=51.7
Q ss_pred ccceecC-cceEEEEecceEEEEE--------EeC-------CCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEE-EE
Q psy840 81 YTEHLHT-DEEIRLVLDGSGYFDV--------RDK-------FDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKA-KR 143 (178)
Q Consensus 81 ~~eH~H~-~dEi~~il~G~g~f~v--------~~~-------~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~a-lr 143 (178)
...|.|+ .+|++||++|++.+.+ .++ +++...+.+++||++.+|+|+.|.|...++..+++ +-
T Consensus 56 ~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~ 135 (239)
T 2xlg_A 56 PMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFV 135 (239)
T ss_dssp CCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEEE
T ss_pred CCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 4789999 5999999999999999 443 11233589999999999999999998877655666 55
Q ss_pred Ee
Q psy840 144 YF 145 (178)
Q Consensus 144 lF 145 (178)
++
T Consensus 136 ~~ 137 (239)
T 2xlg_A 136 WM 137 (239)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 49
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.66 E-value=3.1e-08 Score=80.84 Aligned_cols=57 Identities=28% Similarity=0.369 Sum_probs=47.9
Q ss_pred hccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeec-CCCCcEEEEE
Q psy840 80 FYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTL-DINNYVKAKR 143 (178)
Q Consensus 80 f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~-~~~~~~~alr 143 (178)
...+|.|+.+|+.||++|++.+.+.+ + ...+++||.+.+|+|+.|++.+ .++ ++++-
T Consensus 165 ~~~~H~H~~~e~~~Vl~G~~~~~i~g---~--~~~l~~Gd~i~ip~~~~H~~~~~~~~--~~~ll 222 (227)
T 3rns_A 165 SLDPHKAPGDALVTVLDGEGKYYVDG---K--PFIVKKGESAVLPANIPHAVEAETEN--FKMLL 222 (227)
T ss_dssp EEEEECCSSEEEEEEEEEEEEEEETT---E--EEEEETTEEEEECTTSCEEEECCSSC--EEEEE
T ss_pred ccCCEECCCcEEEEEEeEEEEEEECC---E--EEEECCCCEEEECCCCcEEEEeCCCC--EEEEE
Confidence 35799999999999999999999954 3 3899999999999999999998 544 44443
No 50
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.64 E-value=2e-07 Score=84.78 Aligned_cols=71 Identities=14% Similarity=0.258 Sum_probs=58.3
Q ss_pred hccceecCc-ceEEEEecceEEEEEEeCCC-cEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEe-ecCCce
Q psy840 80 FYTEHLHTD-EEIRLVLDGSGYFDVRDKFD-DWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYF-IGEPVW 151 (178)
Q Consensus 80 f~~eH~H~~-dEi~~il~G~g~f~v~~~~d-~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF-~~~~gW 151 (178)
....|+|+. +|+.||++|++.+.+.+.++ +++...+++||+++||+|+.|.+..+ +..+..+-++ ...++-
T Consensus 350 ~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~ng-~~~l~~l~f~~s~~p~~ 423 (476)
T 1fxz_A 350 MFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQ-SDNFEYVSFKTNDTPMI 423 (476)
T ss_dssp EEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC-STTEEEEEEESSSSCCE
T ss_pred eecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEeC-CCCEEEEEEECCCCCce
Confidence 478999996 89999999999999987654 56667899999999999999999884 5667777777 334543
No 51
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.62 E-value=1.4e-07 Score=86.13 Aligned_cols=73 Identities=15% Similarity=0.194 Sum_probs=59.3
Q ss_pred hccceecCc-ceEEEEecceEEEEEEeCCC-cEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeec-CCceee
Q psy840 80 FYTEHLHTD-EEIRLVLDGSGYFDVRDKFD-DWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIG-EPVWTP 153 (178)
Q Consensus 80 f~~eH~H~~-dEi~~il~G~g~f~v~~~~d-~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~-~~gW~~ 153 (178)
....|+|+. +|+.||++|++.+.+.+.++ +++...+++||+++||+|+.|+..+++ ..+..+-+|+. .++-..
T Consensus 379 ~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~vvP~G~~H~~~n~~-e~~~~l~~~ts~~p~~~~ 454 (493)
T 2d5f_A 379 IYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVVPQNFVVAEQGGE-QGLEYVVFKTHHNAVSSY 454 (493)
T ss_dssp EEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEE-EEEEEEEEESSTTCCEEE
T ss_pred eeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEEECCCCeEeeeeCC-CCEEEEEEECCCCCccee
Confidence 478999996 89999999999999988653 456678999999999999999988754 55778888844 455444
No 52
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.62 E-value=6.5e-08 Score=75.89 Aligned_cols=62 Identities=23% Similarity=0.435 Sum_probs=45.7
Q ss_pred ecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCCceeec
Q psy840 85 LHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEPVWTPH 154 (178)
Q Consensus 85 ~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~gW~~~ 154 (178)
.|+.+|+.|||+|++.+.+. |+ .+.+++||.+.||+|+.|+|... ..++.+-+.. +++|...
T Consensus 81 ~~~~eE~~yVLeG~~~l~i~---g~--~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~V~~-P~~~~~~ 142 (151)
T 4axo_A 81 TLNYDEIDYVIDGTLDIIID---GR--KVSASSGELIFIPKGSKIQFSVP--DYARFIYVTY-PADWASQ 142 (151)
T ss_dssp ECSSEEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTTCEEEEEEE--EEEEEEEEEE-CSCC---
T ss_pred eCCCcEEEEEEEeEEEEEEC---CE--EEEEcCCCEEEECCCCEEEEEeC--CCEEEEEEEC-CCCcccc
Confidence 35679999999999999984 33 38999999999999999999886 2344444443 3555543
No 53
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.61 E-value=2.2e-07 Score=85.26 Aligned_cols=72 Identities=15% Similarity=0.255 Sum_probs=58.8
Q ss_pred hccceecCc-ceEEEEecceEEEEEEeCCC-cEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEee-cCCcee
Q psy840 80 FYTEHLHTD-EEIRLVLDGSGYFDVRDKFD-DWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFI-GEPVWT 152 (178)
Q Consensus 80 f~~eH~H~~-dEi~~il~G~g~f~v~~~~d-~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~-~~~gW~ 152 (178)
....|+|+. +|+.||++|++.+.+.+.++ +.+...+++||+++||+|+.|.+..+ +..+..+-+++ ..++-+
T Consensus 384 ~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~viP~G~~H~~~Ng-~e~l~~l~f~~s~~p~~~ 458 (510)
T 3c3v_A 384 LFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQNFAVAGKSQ-SDNFEYVAFKTDSRPSIA 458 (510)
T ss_dssp EEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSSSCCEE
T ss_pred eecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEEECCCCeEEEEeC-CCCEEEEEEECCCCccee
Confidence 478999995 89999999999999987654 56667799999999999999999884 56677777773 345443
No 54
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.60 E-value=8.7e-08 Score=80.19 Aligned_cols=59 Identities=19% Similarity=0.275 Sum_probs=49.4
Q ss_pred ccc-eecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCC-CcEEEEEE
Q psy840 81 YTE-HLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDIN-NYVKAKRY 144 (178)
Q Consensus 81 ~~e-H~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~-~~~~alrl 144 (178)
... |.|..+|+.||++|++.+.+. |++ +.+++||.|.+|+|+.|++...++ ..++.+-+
T Consensus 195 ~~~~H~H~~~E~~yVl~G~~~~~i~---~~~--~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~ 255 (274)
T 1sef_A 195 HAYIETHVQEHGAYLISGQGMYNLD---NEW--YPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYS 255 (274)
T ss_dssp CSSCBCCSCCEEEEEEECEEEEEET---TEE--EEEETTCEEEECTTCCEEEEEECSSSCEEEEEE
T ss_pred cCcceeccCeEEEEEEeCEEEEEEC---CEE--EEECCCCEEEECCCCCEEEEeCCCCCCEEEEEE
Confidence 355 999999999999999999995 443 899999999999999999988766 55555544
No 55
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.59 E-value=8.8e-08 Score=80.77 Aligned_cols=62 Identities=24% Similarity=0.410 Sum_probs=52.6
Q ss_pred ccceecC-cceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecC
Q psy840 81 YTEHLHT-DEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGE 148 (178)
Q Consensus 81 ~~eH~H~-~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~ 148 (178)
...|.|+ .+|+.||++|++.+.+.+ ++ +.+++||.+++|+|+.|++...++ ..+.+-+|...
T Consensus 231 ~~~h~H~~~~e~~~vl~G~~~~~i~~---~~--~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~~ 293 (337)
T 1y3t_A 231 IVDHYHEYHTETFYCLEGQMTMWTDG---QE--IQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVPG 293 (337)
T ss_dssp CCCEECSSCEEEEEEEESCEEEEETT---EE--EEECTTCEEEECTTCCEEEEECSS-SEEEEEEEESS
T ss_pred CCCcCCCCCcEEEEEEeCEEEEEECC---EE--EEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcCc
Confidence 4689999 599999999999999953 43 899999999999999999998776 67777777553
No 56
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.59 E-value=2.1e-07 Score=80.66 Aligned_cols=67 Identities=15% Similarity=0.105 Sum_probs=55.8
Q ss_pred ccceecCc-ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeec
Q psy840 81 YTEHLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIG 147 (178)
Q Consensus 81 ~~eH~H~~-dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~ 147 (178)
...|.|+. +|+.||++|++.+.+.+.+++--.+.+++||.+++|+|+.|++...++..+..+-++..
T Consensus 270 ~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~ 337 (385)
T 1j58_A 270 RELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKD 337 (385)
T ss_dssp EEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESS
T ss_pred cCceeCCCCCEEEEEEeCeEEEEEEcCCCcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECC
Confidence 45799999 99999999999999984443222489999999999999999998877667777777765
No 57
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.58 E-value=1.6e-07 Score=84.80 Aligned_cols=78 Identities=18% Similarity=0.189 Sum_probs=61.9
Q ss_pred eeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCC-CCc
Q psy840 60 EDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDI-NNY 138 (178)
Q Consensus 60 ~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~-~~~ 138 (178)
.-.+++.|. .+...|.|..+|+.||++|+|.+.+.+.++. ....+++||++++|+|+.||+...+ +..
T Consensus 88 ~~~~~l~Pg----------g~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~~ 156 (445)
T 2cav_A 88 VLEYCSKPN----------TLLLPHHSDSDLLVLVLEGQAILVLVNPDGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQN 156 (445)
T ss_dssp EEEEEECSS----------EEEEEEEESSEEEEEEEESEEEEEEEETTEE-EEEEEETTEEEEECTTCCEEEEECCSSCC
T ss_pred EEEEEECCC----------cCccCcCCCCceEEEEEeCEEEEEEEeCCCC-EEEEecCCCEEEECCCCcEEEEECCCCCC
Confidence 345566664 3467895566999999999999998764433 4689999999999999999998876 677
Q ss_pred EEEEEEeecC
Q psy840 139 VKAKRYFIGE 148 (178)
Q Consensus 139 ~~alrlF~~~ 148 (178)
++++-+|...
T Consensus 157 l~~l~v~~~~ 166 (445)
T 2cav_A 157 LRILKFAITF 166 (445)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEeccC
Confidence 8888888743
No 58
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.58 E-value=1.6e-07 Score=74.95 Aligned_cols=64 Identities=19% Similarity=0.321 Sum_probs=54.0
Q ss_pred ccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCC
Q psy840 81 YTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEP 149 (178)
Q Consensus 81 ~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~ 149 (178)
...|.|..+|..||++|++.+.+.+ ++ ...+++||.+ +|+|+.|++...++..++++-++....
T Consensus 92 ~~~H~H~~eE~~~VLeGel~l~ld~--ge--~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V~~P~~ 155 (172)
T 3es1_A 92 SPMHRTNSIDYGIVLEGEIELELDD--GA--KRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFILIEAP 155 (172)
T ss_dssp CCCBCCSEEEEEEEEESCEEEECGG--GC--EEEECTTCEE-EECSCCBEEECCSSSCEEEEEEEEECC
T ss_pred CCCeecCceEEEEEEeCEEEEEECC--Ce--EEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEEEcCCC
Confidence 4789999999999999999999963 23 3789999999 999999999988777788887777653
No 59
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.57 E-value=6.9e-08 Score=85.44 Aligned_cols=58 Identities=26% Similarity=0.478 Sum_probs=49.4
Q ss_pred ccceecCcceEEEEecceEE-EEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEE
Q psy840 81 YTEHLHTDEEIRLVLDGSGY-FDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKR 143 (178)
Q Consensus 81 ~~eH~H~~dEi~~il~G~g~-f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alr 143 (178)
...|.|..+|++||++|+|. +.+. |+ ++.+++||+|++|+|..|.+..+++..+..+-
T Consensus 116 ~~~HrH~~~ev~~VleG~G~~~~vd---G~--~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~ 174 (368)
T 3nw4_A 116 APEHRHSQNAFRFVVEGEGVWTVVN---GD--PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWID 174 (368)
T ss_dssp EEEEEESSCEEEECSSCEEEEEEET---TE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred cCceecccceEEEEEecceEEEEEC---CE--EEEEeCCCEEEECCCCcEEeEeCCCCCeEEEE
Confidence 67899999999999999995 6664 33 59999999999999999999988776666653
No 60
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.57 E-value=1.1e-07 Score=80.25 Aligned_cols=61 Identities=28% Similarity=0.456 Sum_probs=50.9
Q ss_pred ccceecC-cceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeec
Q psy840 81 YTEHLHT-DEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIG 147 (178)
Q Consensus 81 ~~eH~H~-~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~ 147 (178)
...|.|+ .+|++||++|++.+.+.+ + ...+++||+|.+|+|+.|.+...++. ++.+-++..
T Consensus 59 ~~~h~H~~~~e~~~Vl~G~~~~~~~~---~--~~~l~~Gd~~~~p~~~~H~~~n~~~~-~~~~~~~~p 120 (337)
T 1y3t_A 59 FPLHVHKDTHEGILVLDGKLELTLDG---E--RYLLISGDYANIPAGTPHSYRMQSHR-TRLVSYTMK 120 (337)
T ss_dssp EEEEECTTCCEEEEEEESCEEEEETT---E--EEEECTTCEEEECTTCCEEEEECSTT-EEEEEEEET
T ss_pred CCceeCCCceEEEEEEECEEEEEECC---E--EEEECCCCEEEECCCCcEEEEECCCC-eEEEEEECC
Confidence 5789999 799999999999999853 3 38999999999999999999887653 666666544
No 61
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.56 E-value=2.3e-07 Score=80.57 Aligned_cols=64 Identities=16% Similarity=0.161 Sum_probs=51.6
Q ss_pred ceecC-cceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeec
Q psy840 83 EHLHT-DEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIG 147 (178)
Q Consensus 83 eH~H~-~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~ 147 (178)
.|.|. .+|++||++|++.+.+.+.++..-.+.+++||.+.+|+|+.|+|...++.. +.+-++..
T Consensus 65 ~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l~v~~p 129 (350)
T 1juh_A 65 PHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMTGVIVP 129 (350)
T ss_dssp CEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEEEEEES
T ss_pred cccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEEEEEcC
Confidence 89998 699999999999999987333222489999999999999999998866543 55555544
No 62
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.55 E-value=2e-07 Score=84.77 Aligned_cols=92 Identities=14% Similarity=0.145 Sum_probs=70.2
Q ss_pred EeeChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCc-----------
Q psy840 41 FNVQDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDD----------- 109 (178)
Q Consensus 41 ~~~~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~----------- 109 (178)
|.-..+.|+-+ |+.. --++|.|. .+...|.|+.+|+.||++|+|.+.+...+..
T Consensus 36 ~~~~~~~l~~~----gvs~-~r~~l~Pg----------gl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~ 100 (476)
T 1fxz_A 36 WNPNNKPFQCA----GVAL-SRCTLNRN----------ALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQ 100 (476)
T ss_dssp CCTTSHHHHHH----TCEE-EEEEECTT----------EEEEEEEESSCEEEEEEECCEEEEEECTTCCCC---------
T ss_pred eCCCChhhccC----ceEE-EEEEEcCC----------CEecceecCCceEEEEEecEEEEEEEcCCCcchhhccccccc
Confidence 54444555544 7643 33566664 4578999999999999999999999864321
Q ss_pred -----------EEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeec
Q psy840 110 -----------WIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIG 147 (178)
Q Consensus 110 -----------~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~ 147 (178)
.....+++||+|.||+|+.||+..+++..++++-+|..
T Consensus 101 ~~~~~~~~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~ 149 (476)
T 1fxz_A 101 RGQSSRPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDT 149 (476)
T ss_dssp ---------CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECT
T ss_pred cccccccccccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecC
Confidence 01268999999999999999999888888999999864
No 63
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.53 E-value=2.5e-07 Score=79.26 Aligned_cols=58 Identities=19% Similarity=0.244 Sum_probs=49.8
Q ss_pred ccceecCc-ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEE
Q psy840 81 YTEHLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVK 140 (178)
Q Consensus 81 ~~eH~H~~-dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~ 140 (178)
+.+| |++ ||.+|+++|.....+++ +|+.-.|.+++||+++||+|++|+....++....
T Consensus 44 ~d~H-~~~~dE~FyqlkG~m~l~~~d-~g~~~~V~i~eGemfllP~gv~HsP~r~~et~gL 102 (286)
T 2qnk_A 44 KDYH-IEEGEEVFYQLEGDMVLRVLE-QGKHRDVVIRQGEIFLLPARVPHSPQRFANTVGL 102 (286)
T ss_dssp CCEE-ECSSCEEEEEEESCEEEEEEE-TTEEEEEEECTTEEEEECTTCCEEEEECTTCEEE
T ss_pred ccCc-CCCCCeEEEEEeCeEEEEEEe-CCceeeEEECCCeEEEeCCCCCcCCcccCCeEEE
Confidence 6899 876 99999999999999998 4555669999999999999999999876654433
No 64
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.52 E-value=1.4e-07 Score=77.58 Aligned_cols=60 Identities=23% Similarity=0.221 Sum_probs=49.7
Q ss_pred hccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEE-EeCCCCeeeeecCCCCcEEEEEE
Q psy840 80 FYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLI-IIPAGIYHRFTLDINNYVKAKRY 144 (178)
Q Consensus 80 f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli-~vPaG~~H~f~~~~~~~~~alrl 144 (178)
...+|.|+.+|+.||++|++.+.+.+ + ...+++||.| ++|+|+.|++...++..+..+.+
T Consensus 46 ~~~~H~H~~~e~~~Vl~G~~~~~~~~---~--~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i 106 (243)
T 3h7j_A 46 NVEPHQHKEVQIGMVVSGELMMTVGD---V--TRKMTALESAYIAPPHVPHGARNDTDQEVIAIDI 106 (243)
T ss_dssp EEEEECCSSEEEEEEEESEEEEEETT---E--EEEEETTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred ccCCEECCCcEEEEEEEeEEEEEECC---E--EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEE
Confidence 35799999999999999999999943 3 3799999999 59999999998876655555544
No 65
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.51 E-value=6.7e-08 Score=72.89 Aligned_cols=67 Identities=16% Similarity=0.225 Sum_probs=51.6
Q ss_pred cCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecC
Q psy840 55 RNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLD 134 (178)
Q Consensus 55 ~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~ 134 (178)
.|-...-+..+.|.. +.+|.|..+|+.|||+|++.+.+.+ ++ .+.+++||.+++|+|+.|++...
T Consensus 46 ~g~~~~g~w~~~pG~-----------~~~~~~~~~E~~~Vl~G~~~l~~~~--g~--~~~l~~GD~~~ip~g~~h~~~~~ 110 (123)
T 3bcw_A 46 QGKVESGVWESTSGS-----------FQSNTTGYIEYCHIIEGEARLVDPD--GT--VHAVKAGDAFIMPEGYTGRWEVD 110 (123)
T ss_dssp TTTEEEEEEEEEEEE-----------EECCCTTEEEEEEEEEEEEEEECTT--CC--EEEEETTCEEEECTTCCCEEEEE
T ss_pred CCCEEEEEEEECCCc-----------eeeEcCCCcEEEEEEEEEEEEEECC--Ce--EEEECCCCEEEECCCCeEEEEEC
Confidence 344455566666542 3467777799999999999999843 33 38999999999999999999887
Q ss_pred CC
Q psy840 135 IN 136 (178)
Q Consensus 135 ~~ 136 (178)
+.
T Consensus 111 ~~ 112 (123)
T 3bcw_A 111 RH 112 (123)
T ss_dssp EE
T ss_pred Cc
Confidence 54
No 66
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.51 E-value=3.1e-07 Score=82.09 Aligned_cols=77 Identities=18% Similarity=0.189 Sum_probs=61.3
Q ss_pred eeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecC-CCC
Q psy840 59 YEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLD-INN 137 (178)
Q Consensus 59 ~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~-~~~ 137 (178)
..-.+++.|. .+...|.|..+|+.||++|+|.+.+-+. +.-....+++||+++||+|+.||+... ++.
T Consensus 50 s~~~~~l~PG----------g~~~pHh~~a~E~~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e 118 (416)
T 1uij_A 50 RIVQFQSKPN----------TILLPHHADADFLLFVLSGRAILTLVNN-DDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQ 118 (416)
T ss_dssp EEEEEEECTT----------EEEEEEEESEEEEEEEEESCEEEEEECS-SCEEEEEECTTEEEEECTTCEEEEEECCSSC
T ss_pred EEEEEEeccC----------cCcccccCCCceEEEEEeeEEEEEEEEC-CCCeEEEecCCCEEEECCCCeEEEEecCCCC
Confidence 3456667775 3568994455999999999999998654 334468999999999999999999887 477
Q ss_pred cEEEEEEee
Q psy840 138 YVKAKRYFI 146 (178)
Q Consensus 138 ~~~alrlF~ 146 (178)
.++++.++.
T Consensus 119 ~l~~l~~~~ 127 (416)
T 1uij_A 119 NLKMIWLAI 127 (416)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEec
Confidence 888888875
No 67
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.51 E-value=3.6e-07 Score=82.15 Aligned_cols=76 Identities=17% Similarity=0.212 Sum_probs=59.7
Q ss_pred eeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCC-CCc
Q psy840 60 EDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDI-NNY 138 (178)
Q Consensus 60 ~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~-~~~ 138 (178)
.-.+++.|. .+...|.|..+|+.||++|+|.+.+.+. +.-....+++||++++|+|+.||+...+ +..
T Consensus 63 ~~~~~l~PG----------g~~~pHh~~a~Ei~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~ 131 (434)
T 2ea7_A 63 VVEFKSKPN----------TLLLPHHADADFLLVVLNGTAVLTLVNP-DSRDSYILEQGHAQKIPAGTTFFLVNPDDNEN 131 (434)
T ss_dssp EEEEEECTT----------EEEEEEEESEEEEEEEEESEEEEEEECS-SCEEEEEEETTEEEEECTTCEEEEEECCSSCC
T ss_pred EEEEEecCC----------cCccCccCCCceEEEEEecEEEEEEEeC-CCCEEEEeCCCCEEEECCCccEEEEeCCCCCC
Confidence 455666664 3568994445999999999999998763 3344689999999999999999998876 667
Q ss_pred EEEEEEee
Q psy840 139 VKAKRYFI 146 (178)
Q Consensus 139 ~~alrlF~ 146 (178)
+.++-+|.
T Consensus 132 l~~l~~~~ 139 (434)
T 2ea7_A 132 LRIIKLAI 139 (434)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEec
Confidence 88887764
No 68
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=98.51 E-value=6e-07 Score=71.42 Aligned_cols=54 Identities=19% Similarity=0.027 Sum_probs=46.2
Q ss_pred cceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEE
Q psy840 82 TEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVK 140 (178)
Q Consensus 82 ~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~ 140 (178)
..+.|..+|++||++|++.+.+.++ ...+++||.+.+|+|..|+|....+..++
T Consensus 104 ~~~~h~gEE~~yVLeG~v~vtl~g~-----~~~L~~Gds~~iP~g~~H~~~N~~d~~Ar 157 (166)
T 2vpv_A 104 LSNSFRTYITFHVIQGIVEVTVCKN-----KFLSVKGSTFQIPAFNEYAIANRGNDEAK 157 (166)
T ss_dssp EEECCSEEEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTCEEEEEECSSSCEE
T ss_pred CccCCCceEEEEEEEeEEEEEECCE-----EEEEcCCCEEEECCCCCEEEEECCCCCEE
Confidence 4477888999999999999999653 38999999999999999999987765543
No 69
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.50 E-value=2.6e-07 Score=83.72 Aligned_cols=69 Identities=14% Similarity=0.116 Sum_probs=57.4
Q ss_pred hhccceecCcceEEEEecceEEEEEEeCCCc-E--------------------EEEEEeCCcEEEeCCCCeeeeecCCCC
Q psy840 79 SFYTEHLHTDEEIRLVLDGSGYFDVRDKFDD-W--------------------IRIEVTKGDLIIIPAGIYHRFTLDINN 137 (178)
Q Consensus 79 ~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~-~--------------------~ri~~~~GDli~vPaG~~H~f~~~~~~ 137 (178)
.+...|.|+..|+.||++|+|.+.+...+.. . ....+++||+|+||+|+.||+..+++.
T Consensus 74 gl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~l~~GDv~~iPaG~~H~~~N~g~~ 153 (459)
T 2e9q_A 74 GLLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRPFREGDLLVVPAGVSHWMYNRGQS 153 (459)
T ss_dssp EEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEEEETTEEEEECTTCCEEEEECSSS
T ss_pred CEecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEEecCCCEEEECCCCCEEEEeCCCC
Confidence 4568999999999999999999998644321 1 125899999999999999999988888
Q ss_pred cEEEEEEeec
Q psy840 138 YVKAKRYFIG 147 (178)
Q Consensus 138 ~~~alrlF~~ 147 (178)
.+.++-+|..
T Consensus 154 ~l~~l~~~d~ 163 (459)
T 2e9q_A 154 DLVLIVFADT 163 (459)
T ss_dssp CEEEEEEEES
T ss_pred CEEEEEEecC
Confidence 8999988874
No 70
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.49 E-value=9.2e-08 Score=83.50 Aligned_cols=61 Identities=23% Similarity=0.392 Sum_probs=50.5
Q ss_pred hccceecCcceEEEEecceEEE-EEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEe
Q psy840 80 FYTEHLHTDEEIRLVLDGSGYF-DVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYF 145 (178)
Q Consensus 80 f~~eH~H~~dEi~~il~G~g~f-~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF 145 (178)
....|.|..+|++||++|+|.| .+. |+ ++.+++||+|+||+|+.|++...++..+..+.+.
T Consensus 112 ~~~~H~H~~~e~~yVl~G~g~~t~v~---g~--~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v~ 173 (354)
T 2d40_A 112 VAPSHRHNQSALRFIVEGKGAFTAVD---GE--RTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGL 173 (354)
T ss_dssp EEEEEEESSCEEEEEEECSSCEEEET---TE--EEECCTTCEEEECTTSCEEEECCSSSCEEEEEEE
T ss_pred CcCCeecCcceEEEEEEEEEEEEEEC---CE--EEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 3568999999999999999998 664 33 4899999999999999999988766556666553
No 71
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.49 E-value=3.2e-07 Score=79.72 Aligned_cols=63 Identities=17% Similarity=0.213 Sum_probs=51.2
Q ss_pred hccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeec
Q psy840 80 FYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIG 147 (178)
Q Consensus 80 f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~ 147 (178)
....|+|+.+++.||++|++.+.+.+. + ++.+++||.|+||+|+.|.+...++ +.+.+-+.++
T Consensus 264 ~~~~h~~~~~~~~~vleG~~~i~i~g~--~--~~~l~~Gd~~~iPag~~h~~~~~~~-~~~~l~~~~g 326 (350)
T 1juh_A 264 TVPTWSFPGACAFQVQEGRVVVQIGDY--A--ATELGSGDVAFIPGGVEFKYYSEAY-FSKVLFVSSG 326 (350)
T ss_dssp CCCCBCCSSCEEEEEEESCEEEEETTS--C--CEEECTTCEEEECTTCCEEEEESSS-SEEEEEEEES
T ss_pred CCCcccCCCcEEEEEEeeEEEEEECCe--E--EEEeCCCCEEEECCCCCEEEEecCC-eEEEEEEecC
Confidence 467899999999999999999999752 2 2899999999999999999998754 4444444443
No 72
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.49 E-value=5.7e-07 Score=76.36 Aligned_cols=53 Identities=21% Similarity=0.407 Sum_probs=47.2
Q ss_pred ceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEE
Q psy840 83 EHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVK 140 (178)
Q Consensus 83 eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~ 140 (178)
-|+|..++..|||+|+|.+.+ +|+| +.+++||+|.+|+|..|++.+.++..++
T Consensus 202 ~e~H~~eh~~~vL~G~g~y~l---~~~~--~~V~~GD~i~~~~~~~h~~~n~G~e~~~ 254 (266)
T 4e2q_A 202 KEVHYNQHGLLLLEGQGIYRL---GDNW--YPVQAGDVIWMAPFVPQWYAALGKTRSR 254 (266)
T ss_dssp CCCCSCCEEEEEEECEEEEEE---TTEE--EEEETTCEEEECTTCCEEEEEESSSCEE
T ss_pred ceEcccceEEEEEeceEEEEE---CCEE--EEecCCCEEEECCCCcEEEEeCCCCCEE
Confidence 589999999999999999998 4667 8999999999999999999987766654
No 73
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.48 E-value=1.8e-07 Score=77.60 Aligned_cols=58 Identities=21% Similarity=0.199 Sum_probs=46.3
Q ss_pred ccceecC-cceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCC-CcEEEEE
Q psy840 81 YTEHLHT-DEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDIN-NYVKAKR 143 (178)
Q Consensus 81 ~~eH~H~-~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~-~~~~alr 143 (178)
...|.|. .+|+.||++|++.+.+.+ ++ +.+++||.|.+|+|+.|++...++ ..++.+-
T Consensus 192 ~~~h~H~~~~E~~~Vl~G~~~~~i~~---~~--~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l~ 251 (261)
T 1rc6_A 192 HGYIETHVQEHGAYILSGQGVYNLDN---NW--IPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIY 251 (261)
T ss_dssp BEEEEEESSCEEEEEEESEEEEESSS---CE--EEEETTCEEEECSSEEEEEEEC----CEEEEE
T ss_pred cCcccCCCceEEEEEEEeEEEEEECC---EE--EEeCCCCEEEECCCCcEEeEeCCCCcCEEEEE
Confidence 4678886 589999999999999964 43 899999999999999999988766 5555543
No 74
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.48 E-value=2.8e-07 Score=77.80 Aligned_cols=58 Identities=14% Similarity=0.202 Sum_probs=48.1
Q ss_pred cceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEE
Q psy840 82 TEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRY 144 (178)
Q Consensus 82 ~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrl 144 (178)
..|.|..+|+.||++|++.+.+.++ ...+++||.|.+|+|+.|++...++..++.+-+
T Consensus 84 ~~h~H~~eE~~~Vl~G~l~v~v~g~-----~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l~v 141 (278)
T 1sq4_A 84 PEQDPNAEAVLFVVEGELSLTLQGQ-----VHAMQPGGYAFIPPGADYKVRNTTGQHTRFHWI 141 (278)
T ss_dssp CCCCTTEEEEEEEEESCEEEEESSC-----EEEECTTEEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred CCcCCCceEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCcEEEEECCCCCEEEEEE
Confidence 5688999999999999999999653 389999999999999999998876555544433
No 75
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=98.47 E-value=2.5e-07 Score=70.37 Aligned_cols=57 Identities=23% Similarity=0.341 Sum_probs=44.2
Q ss_pred CcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCCce
Q psy840 87 TDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEPVW 151 (178)
Q Consensus 87 ~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~gW 151 (178)
..+|+.|||+|++.+.+.+ + .+.+++||.|.+|+|+.|++...+ .++.+-++. ++.|
T Consensus 74 ~~~E~~~VLeG~~~l~~~g---~--~~~l~~GD~i~~p~g~~h~~~~~~--~~~~l~v~~-p~~~ 130 (133)
T 2pyt_A 74 NYDEIDMVLEGELHVRHEG---E--TMIAKAGDVMFIPKGSSIEFGTPT--SVRFLYVAW-PANW 130 (133)
T ss_dssp SSEEEEEEEEEEEEEEETT---E--EEEEETTCEEEECTTCEEEEEEEE--EEEEEEEEE-STTC
T ss_pred CCCEEEEEEECEEEEEECC---E--EEEECCCcEEEECCCCEEEEEeCC--CEEEEEEEc-CCcc
Confidence 4799999999999999853 3 379999999999999999998643 345554443 3444
No 76
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.47 E-value=2.3e-07 Score=82.72 Aligned_cols=95 Identities=19% Similarity=0.169 Sum_probs=64.6
Q ss_pred ChHHHHHHHH---hcCCCeeeEEEEcCCCCCC-----HHHH-----hhhhccceecCcceEEEEecceEEEEEEeCCCcE
Q psy840 44 QDEVLTKLRK---DRNYNYEDEITCSKDCLPN-----YEEK-----LKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDW 110 (178)
Q Consensus 44 ~~~~l~~l~~---~~gy~~~Dvv~l~~~~~p~-----~e~~-----~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~ 110 (178)
..+.|+++.+ ..++...-+.-++|+. .. +-.. -+.-...|.|..++++||++|+|++.|.+ +
T Consensus 258 ~~~~L~~~~~~~~~~~~~~~~l~l~nP~~-g~~~~~tl~~~~~~l~PG~~~~~HrH~~~~v~~VleG~G~~~V~g---e- 332 (394)
T 3bu7_A 258 TYEALLNYAKASDGSPYDGLILRYTNPQT-GGHPMLTMGASMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSIVGG---K- 332 (394)
T ss_dssp HHHHHHHHHTTCCCBTTTBEEEEECCTTT-SSCSSSSCEEEEEEECTTCBCCCEEESSCEEEEEEECCEEEEETT---E-
T ss_pred HHHHHHHhhhccCcCcCCceEEEEeCCCC-CCCCCCeeeEEEEEECCCCcCCCcccCCcEEEEEEeCeEEEEECC---E-
Confidence 4455666542 3555555555556652 21 1000 01236789999999999999999988853 3
Q ss_pred EEEEEeCCcEEEeCCCCeeeeecCC-CCcEEEEEE
Q psy840 111 IRIEVTKGDLIIIPAGIYHRFTLDI-NNYVKAKRY 144 (178)
Q Consensus 111 ~ri~~~~GDli~vPaG~~H~f~~~~-~~~~~alrl 144 (178)
++.+++||+|+||+|..|.+...+ +..+..+.+
T Consensus 333 -~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i 366 (394)
T 3bu7_A 333 -RFDWSEHDIFCVPAWTWHEHCNTQERDDACLFSF 366 (394)
T ss_dssp -EEEECTTCEEEECTTCCEEEEECCSSCCEEEEEE
T ss_pred -EEEEeCCCEEEECCCCeEEeEeCCCCCCeEEEEe
Confidence 499999999999999999998765 444555544
No 77
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.46 E-value=4.4e-07 Score=82.52 Aligned_cols=96 Identities=13% Similarity=0.119 Sum_probs=70.2
Q ss_pred eeEEeeChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCC-CcEE-----
Q psy840 38 VEYFNVQDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKF-DDWI----- 111 (178)
Q Consensus 38 v~~~~~~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~-d~~~----- 111 (178)
+.+|.-.++.|+- .|+...- ++|.|. .+...|+|...|+.||++|+|++.+-..+ .+.+
T Consensus 35 ~e~~d~~~~~l~~----~gvs~~R-~~i~P~----------gl~~Ph~h~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~ 99 (465)
T 3qac_A 35 TEVWDSNEQEFRC----AGVSVIR-RTIEPH----------GLLLPSFTSAPELIYIEQGNGITGMMIPGCPETYESGSQ 99 (465)
T ss_dssp EEECCTTSHHHHH----HTCEEEE-EEECTT----------EEEEEEEESSCEEEEEEECEEEEEEECTTCCCCC-----
T ss_pred EEEECCCChhhcc----cceEEEE-EEEcCC----------cCcccEEcCCCEEEEEEECcEEEEEecCCCCceeecchh
Confidence 3345433444433 2765433 455654 45789999889999999999999987432 1111
Q ss_pred -------------------------------EEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecC
Q psy840 112 -------------------------------RIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGE 148 (178)
Q Consensus 112 -------------------------------ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~ 148 (178)
...+++||+|+||+|+.||+..+++..++++-+|...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~ 167 (465)
T 3qac_A 100 QFQGGEDERIREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTA 167 (465)
T ss_dssp -------------------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTT
T ss_pred ccccccccccccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCC
Confidence 2589999999999999999999888889999998764
No 78
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.46 E-value=3.9e-07 Score=83.65 Aligned_cols=93 Identities=15% Similarity=0.175 Sum_probs=70.0
Q ss_pred EeeChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCc-----------
Q psy840 41 FNVQDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDD----------- 109 (178)
Q Consensus 41 ~~~~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~----------- 109 (178)
|.-.++.|+- .|+. .-.++|.|. .+...|.|+..|+.||++|+|.+.+...+..
T Consensus 36 ~~~~~~~l~~----~gvs-~~r~~i~p~----------gl~lPh~~~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~ 100 (510)
T 3c3v_A 36 WNPNNQEFEC----AGVA-LSRLVLRRN----------ALRRPFYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGR 100 (510)
T ss_dssp CCTTSHHHHH----HTCE-EEEEEECTT----------EEEEEEECSSCEEEEEEECCEEEEEECTTCCCCEEEECCC--
T ss_pred eCCCCccccc----CcEE-EEEEEECCC----------CCccceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccc
Confidence 5434455542 3765 344566664 4578999999999999999999999864320
Q ss_pred ------------------------EEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecC
Q psy840 110 ------------------------WIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGE 148 (178)
Q Consensus 110 ------------------------~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~ 148 (178)
..-..+++||+|.||+|+.||+..+++..++++-+|...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~ 163 (510)
T 3c3v_A 101 RYQSQRPPRRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTN 163 (510)
T ss_dssp ------------------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTT
T ss_pred ccccccccccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCC
Confidence 001579999999999999999998888889999888653
No 79
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.45 E-value=4.7e-07 Score=82.72 Aligned_cols=90 Identities=16% Similarity=0.138 Sum_probs=68.8
Q ss_pred EeeChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCC-------------
Q psy840 41 FNVQDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKF------------- 107 (178)
Q Consensus 41 ~~~~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~------------- 107 (178)
|.-..+.|+. .|+ ..-.++|.|. .+...|.|+..++.||++|+|.+.+...+
T Consensus 33 ~~~~~~~l~~----~gv-~~~r~~i~pg----------gl~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~ 97 (493)
T 2d5f_A 33 WNSQHPELQC----AGV-TVSKRTLNRN----------GLHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSS 97 (493)
T ss_dssp CCTTSHHHHH----HTC-EEEEEEECTT----------EEEEEEECSSCEEEEEEECEEEEEECCTTCCCCEEECC----
T ss_pred eCCCChhhcc----CCE-EEEEEEeCCC----------cEeCceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccc
Confidence 4433444433 365 4455677775 35689999999999999999999987422
Q ss_pred --------------CcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeec
Q psy840 108 --------------DDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIG 147 (178)
Q Consensus 108 --------------d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~ 147 (178)
.++ ..+++||+|+||+|+.||+..+++..+.++-+|..
T Consensus 98 ~~~~~~~~~~~d~~qkv--~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~ 149 (493)
T 2d5f_A 98 RRGSRSQQQLQDSHQKI--RHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDT 149 (493)
T ss_dssp ---------CSEEESCE--EEEETTEEEEECTTCCEEEEECSSSCEEEEEEECT
T ss_pred ccccccccccccccceE--EEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecC
Confidence 123 48999999999999999999988888999988864
No 80
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=98.45 E-value=1e-06 Score=81.20 Aligned_cols=72 Identities=17% Similarity=0.239 Sum_probs=56.7
Q ss_pred hccceecCc-ceEEEEecceEEEEEEeCCC-cEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEee-cCCcee
Q psy840 80 FYTEHLHTD-EEIRLVLDGSGYFDVRDKFD-DWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFI-GEPVWT 152 (178)
Q Consensus 80 f~~eH~H~~-dEi~~il~G~g~f~v~~~~d-~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~-~~~gW~ 152 (178)
....|+|+. +|+.||++|++.+.+.+.++ +++...+++||+++||+|+.|...++ +..+..+-|.+ ..++-.
T Consensus 406 m~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G~~H~~~ag-~e~l~flaF~ss~np~~~ 480 (531)
T 3fz3_A 406 IYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGVIQQAG-NQGFEYFAFKTEENAFIN 480 (531)
T ss_dssp EEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEE-EEEEEEEEEESSTTCCEE
T ss_pred cccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCCCeEEEecC-CCCEEEEEEecCCCCcce
Confidence 578999997 89999999999999988654 56788999999999999999976655 44555554434 345543
No 81
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.43 E-value=8.6e-07 Score=73.21 Aligned_cols=52 Identities=25% Similarity=0.402 Sum_probs=45.6
Q ss_pred ceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcE
Q psy840 83 EHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYV 139 (178)
Q Consensus 83 eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~ 139 (178)
.|+|..+|..|||+|++.+.+. |+| +.+++||.|.++++..|+|.+.++..+
T Consensus 181 ~~~h~~ee~~~vLeG~~~~~~~---~~~--~~l~~GD~~~~~~~~pH~~~n~g~~~~ 232 (246)
T 1sfn_A 181 AEVHYMEHGLLMLEGEGLYKLE---ENY--YPVTAGDIIWMGAHCPQWYGALGRNWS 232 (246)
T ss_dssp CBCCSSCEEEEEEECEEEEEET---TEE--EEEETTCEEEECTTCCEEEEEESSSCE
T ss_pred ccCCCceEEEEEEECEEEEEEC---CEE--EEcCCCCEEEECCCCCEEEEcCCCCCE
Confidence 3778899999999999999994 566 799999999999999999998776555
No 82
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.42 E-value=4.2e-07 Score=68.08 Aligned_cols=49 Identities=16% Similarity=0.306 Sum_probs=43.6
Q ss_pred cceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCC
Q psy840 82 TEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDI 135 (178)
Q Consensus 82 ~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~ 135 (178)
..|.|+.-|+.||++|+|.+.+++ + ...+++||+++||+|+.|.+...+
T Consensus 32 ~p~~h~~~~i~~v~~G~~~~~i~~---~--~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 32 RPLGMKGYILNLTIRGQGVVKNQG---R--EFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp ETTCCSSEEEEEEEEECEEEEETT---E--EEEECTTCEEEECTTCCEEEEECT
T ss_pred cccCCCceEEEEEEEeEEEEEECC---E--EEEecCCeEEEEcCCCCEEEEeCC
Confidence 478999999999999999999954 3 389999999999999999998765
No 83
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.41 E-value=7.8e-07 Score=79.28 Aligned_cols=79 Identities=15% Similarity=0.108 Sum_probs=64.3
Q ss_pred CCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcE------EEeCCCCeee
Q psy840 57 YNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDL------IIIPAGIYHR 130 (178)
Q Consensus 57 y~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDl------i~vPaG~~H~ 130 (178)
|. .-.+++.|. .+...|.|..+|+.||++|+|...+.+.+++. ...+++||+ ++||+|+.||
T Consensus 52 ~s-~~~~~l~pg----------g~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~-~~~l~~GDv~~~~~~~~iP~G~~h~ 119 (397)
T 2phl_A 52 YR-LVEFRSKPE----------TLLLPQQADAELLLVVRSGSAILVLVKPDDRR-EYFFLTSDNPIFSDHQKIPAGTIFY 119 (397)
T ss_dssp CE-EEEEEECSS----------EEEEEEEESEEEEEEEEESEEEEEEEETTTEE-EEEEEESSCTTSCSEEEECTTCEEE
T ss_pred EE-EEEEEECCC----------cCccCEecCCCeEEEEEeeeEEEEEEeCCCcE-EEEECCCCcccccceEEECCCCcEE
Confidence 53 455666765 34578889889999999999999998766553 679999999 9999999999
Q ss_pred eecCC-CCcEEEEEEeec
Q psy840 131 FTLDI-NNYVKAKRYFIG 147 (178)
Q Consensus 131 f~~~~-~~~~~alrlF~~ 147 (178)
+...+ +..+.++.+|..
T Consensus 120 ~~N~g~~~~l~~i~~~~~ 137 (397)
T 2phl_A 120 LVNPDPKEDLRIIQLAMP 137 (397)
T ss_dssp EEECCSSCCEEEEEEEEE
T ss_pred EEeCCCCCCeEEEEeecC
Confidence 97665 667888888864
No 84
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.40 E-value=3.7e-07 Score=81.37 Aligned_cols=59 Identities=20% Similarity=0.465 Sum_probs=49.3
Q ss_pred hccceecCcceEEEEecceEEE-EEEeCCCcEEEEEEeCCcEEEeCCCCeeeeec-CCCCcEEEEE
Q psy840 80 FYTEHLHTDEEIRLVLDGSGYF-DVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTL-DINNYVKAKR 143 (178)
Q Consensus 80 f~~eH~H~~dEi~~il~G~g~f-~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~-~~~~~~~alr 143 (178)
....|.|..+|++||++|+|.| .+. |+ ++.+++||+|++|+|..|.... .++..+..+.
T Consensus 135 ~~~~HrH~~~ev~~IleG~G~~t~v~---G~--~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l~ 195 (394)
T 3bu7_A 135 RAGAHRHAASALRFIMEGSGAYTIVD---GH--KVELGANDFVLTPNGTWHEHGILESGTECIWQD 195 (394)
T ss_dssp BCCCEEESSCEEEEEEECSCEEEEET---TE--EEEECTTCEEEECTTCCEEEEECTTCCCEEEEE
T ss_pred CcCCccCCcceEEEEEEeeEEEEEEC---CE--EEEEcCCCEEEECcCCCEEEEcCCCCCCEEEEE
Confidence 3788999999999999999987 553 33 4999999999999999999988 7666665553
No 85
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.35 E-value=3.7e-06 Score=76.99 Aligned_cols=87 Identities=13% Similarity=0.104 Sum_probs=67.1
Q ss_pred EEEcCCCCCCHHHH----------hhhhccceecCc-ceEEEEecceEEEEEEeCCC-cEEEEEEeCCcEEEeCCCCeee
Q psy840 63 ITCSKDCLPNYEEK----------LKSFYTEHLHTD-EEIRLVLDGSGYFDVRDKFD-DWIRIEVTKGDLIIIPAGIYHR 130 (178)
Q Consensus 63 v~l~~~~~p~~e~~----------~~~f~~eH~H~~-dEi~~il~G~g~f~v~~~~d-~~~ri~~~~GDli~vPaG~~H~ 130 (178)
..++...+|....+ -......|+|+. .|+.||++|++.+.+-+.++ +++.-.+++||+++||+|..|.
T Consensus 343 ~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~ 422 (496)
T 3ksc_A 343 KTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVA 422 (496)
T ss_dssp EEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEE
T ss_pred EEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEECCCCEEE
Confidence 34455667776654 124689999998 79999999999999998654 4667789999999999999997
Q ss_pred eecCCCCcEEEEEEeecC-Cc
Q psy840 131 FTLDINNYVKAKRYFIGE-PV 150 (178)
Q Consensus 131 f~~~~~~~~~alrlF~~~-~g 150 (178)
-.++ +..+..+-+|+.. ++
T Consensus 423 ~~a~-~e~~~~l~f~~s~np~ 442 (496)
T 3ksc_A 423 AKSL-SDRFSYVAFKTNDRAG 442 (496)
T ss_dssp EEEC-SSEEEEEEEESSTTCC
T ss_pred EEeC-CCCEEEEEEECCCCCc
Confidence 6555 4557788888543 44
No 86
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.33 E-value=2.5e-06 Score=77.30 Aligned_cols=86 Identities=15% Similarity=0.188 Sum_probs=65.1
Q ss_pred EEEEcCCCCCCHHHHh----------hhhccceecCc-ceEEEEecceEEEEEEeCCC-cEEEEEEeCCcEEEeCCCCee
Q psy840 62 EITCSKDCLPNYEEKL----------KSFYTEHLHTD-EEIRLVLDGSGYFDVRDKFD-DWIRIEVTKGDLIIIPAGIYH 129 (178)
Q Consensus 62 vv~l~~~~~p~~e~~~----------~~f~~eH~H~~-dEi~~il~G~g~f~v~~~~d-~~~ri~~~~GDli~vPaG~~H 129 (178)
+..++...+|....+- ......|+|+. .|+.||++|++.+.+.+.++ +++.-.+++||+++||+|..|
T Consensus 306 v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P~G~~H 385 (459)
T 2e9q_A 306 ISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVV 385 (459)
T ss_dssp EEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred EEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEECCCCEE
Confidence 3445555566655221 13578999997 79999999999999987654 455567999999999999999
Q ss_pred eeecCCCCcEEEEEEeecC
Q psy840 130 RFTLDINNYVKAKRYFIGE 148 (178)
Q Consensus 130 ~f~~~~~~~~~alrlF~~~ 148 (178)
+...+. ..+..+-+|++.
T Consensus 386 ~~~ng~-~~~~~l~~~~s~ 403 (459)
T 2e9q_A 386 IKRASD-RGFEWIAFKTND 403 (459)
T ss_dssp EEEEEE-EEEEEEEEESSS
T ss_pred EEEeCC-CCeEEEEEecCC
Confidence 988754 457888888653
No 87
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.31 E-value=2.2e-06 Score=76.36 Aligned_cols=67 Identities=19% Similarity=0.299 Sum_probs=57.3
Q ss_pred hccceecCc-ceEEEEecceEEEEEEeC------CC-cEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecC
Q psy840 80 FYTEHLHTD-EEIRLVLDGSGYFDVRDK------FD-DWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGE 148 (178)
Q Consensus 80 f~~eH~H~~-dEi~~il~G~g~f~v~~~------~d-~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~ 148 (178)
....|.|+. .|+.||++|+|.+.+.+. ++ +.+...+++||+++||+|..|+....+ .+..+-|+.+.
T Consensus 251 ~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s 325 (397)
T 2phl_A 251 LFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFVIPAAYPVAIKATS--NVNFTGFGINA 325 (397)
T ss_dssp EEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEEECTTCCEEEEESS--SEEEEEEEESC
T ss_pred EeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCEEEECCCCeEEEEeCC--CeEEEEEECCC
Confidence 467899997 899999999999999986 34 688899999999999999999998875 46667777664
No 88
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.31 E-value=2.2e-06 Score=76.52 Aligned_cols=67 Identities=15% Similarity=0.242 Sum_probs=56.1
Q ss_pred hccceecCc-ceEEEEecceEEEEEEeCCC--------------cEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEE
Q psy840 80 FYTEHLHTD-EEIRLVLDGSGYFDVRDKFD--------------DWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRY 144 (178)
Q Consensus 80 f~~eH~H~~-dEi~~il~G~g~f~v~~~~d--------------~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrl 144 (178)
....|.|+. .|+.||++|+|++.+.+.++ +.+.-.+++||+++||+|..|+....+ .+..+-+
T Consensus 261 ~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~~--~~~~l~f 338 (416)
T 1uij_A 261 LLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNATS--NLNFLAF 338 (416)
T ss_dssp EEEEEEESSCEEEEEEEESEEEEEEEEEC------------CCEEEEEEEEETTCEEEECTTCCEEEEESS--SEEEEEE
T ss_pred EecceEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcCC--CeEEEEE
Confidence 578999997 89999999999999988655 355568999999999999999998773 4777888
Q ss_pred eecC
Q psy840 145 FIGE 148 (178)
Q Consensus 145 F~~~ 148 (178)
|+..
T Consensus 339 ~~~~ 342 (416)
T 1uij_A 339 GINA 342 (416)
T ss_dssp EETC
T ss_pred EcCC
Confidence 8654
No 89
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.30 E-value=1.5e-06 Score=79.55 Aligned_cols=69 Identities=19% Similarity=0.196 Sum_probs=56.6
Q ss_pred hhccceecCcceEEEEecceEEEEEEeCC-CcEE--------------------EEEEeCCcEEEeCCCCeeeeecCCCC
Q psy840 79 SFYTEHLHTDEEIRLVLDGSGYFDVRDKF-DDWI--------------------RIEVTKGDLIIIPAGIYHRFTLDINN 137 (178)
Q Consensus 79 ~f~~eH~H~~dEi~~il~G~g~f~v~~~~-d~~~--------------------ri~~~~GDli~vPaG~~H~f~~~~~~ 137 (178)
.+...|+|...|+.||++|+|++.+-..+ .+.+ ...+++||+|+||+|+.||...+++.
T Consensus 57 gl~lPh~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~viPaG~~h~~~N~G~~ 136 (496)
T 3ksc_A 57 ALRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVNRFREGDIIAVPTGIVFWMYNDQDT 136 (496)
T ss_dssp EEEEEEEESSCEEEEEEECCEEEEEECTTCCCC---------------CCCCCCEEEECTTEEEEECTTCEEEEEECSSS
T ss_pred CEeCceEcCCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccchheeeccCCCCEEEECCCCcEEEEcCCCC
Confidence 46789999779999999999999996532 1211 13899999999999999999998888
Q ss_pred cEEEEEEeec
Q psy840 138 YVKAKRYFIG 147 (178)
Q Consensus 138 ~~~alrlF~~ 147 (178)
.+.++-+|..
T Consensus 137 ~lv~v~~~d~ 146 (496)
T 3ksc_A 137 PVIAVSLTDI 146 (496)
T ss_dssp CEEEEEEECT
T ss_pred CEEEEEEecc
Confidence 8999888854
No 90
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.30 E-value=5.2e-07 Score=69.29 Aligned_cols=79 Identities=13% Similarity=0.031 Sum_probs=56.9
Q ss_pred eeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcE
Q psy840 60 EDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYV 139 (178)
Q Consensus 60 ~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~ 139 (178)
.-++++.|+ ..+..|.|+.+|..|||+|+..+...+..+ ...+++||++.+|+|..|.+....+. .
T Consensus 46 ~~~~~~~pG----------~~~p~H~H~~~ee~~VL~G~~~~~~g~~~~---~~~~~~Gd~~~~p~g~~H~p~~~~e~-~ 111 (145)
T 2o1q_A 46 TAIFDCPAG----------SSFAAHVHVGPGEYFLTKGKMDVRGGKAAG---GDTAIAPGYGYESANARHDKTEFPVA-S 111 (145)
T ss_dssp EEEEEECTT----------EEECCEEESSCEEEEEEEEEEEETTCGGGT---SEEEESSEEEEECTTCEESCCEEEEE-E
T ss_pred EEEEEECCC----------CCCCccCCCCCEEEEEEEeEEEEcCCCEec---ceEeCCCEEEEECcCCccCCeECCCC-e
Confidence 467777775 246899999988899999998865543221 16899999999999999995433333 4
Q ss_pred EEEEEeecCCcee
Q psy840 140 KAKRYFIGEPVWT 152 (178)
Q Consensus 140 ~alrlF~~~~gW~ 152 (178)
.++.+|.++-.|.
T Consensus 112 ~~l~~~~gp~~f~ 124 (145)
T 2o1q_A 112 EFYMSFLGPLTFV 124 (145)
T ss_dssp EEEEEEESCEEEE
T ss_pred EEEEEECCcceec
Confidence 5666777765443
No 91
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=98.30 E-value=4.3e-07 Score=65.40 Aligned_cols=62 Identities=15% Similarity=0.066 Sum_probs=49.9
Q ss_pred ccceecCc-ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEE
Q psy840 81 YTEHLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRY 144 (178)
Q Consensus 81 ~~eH~H~~-dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrl 144 (178)
..+|.|+. .|+++|++|++.+...+ +....+.+++||.+.+|+|+.|+....++..+..|.+
T Consensus 30 ~~~H~H~~~~e~~~v~~G~~~v~~~d--~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~IeV 92 (98)
T 3lag_A 30 TGHHTHGMDYVVVPMADGEMTIVAPD--GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp CCSEECCSCEEEEESSCBC-CEECTT--SCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEEE
T ss_pred cCcEECCCcEEEEEEeccEEEEEeCC--CceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEEE
Confidence 57999997 57888889999877643 3433467899999999999999999888877877766
No 92
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=98.29 E-value=5.2e-06 Score=75.47 Aligned_cols=86 Identities=15% Similarity=0.137 Sum_probs=66.4
Q ss_pred EEEEcCCCCCCHHHHh----------hhhccceecCc-ceEEEEecceEEEEEEeCCC-cEEEEEEeCCcEEEeCCCCee
Q psy840 62 EITCSKDCLPNYEEKL----------KSFYTEHLHTD-EEIRLVLDGSGYFDVRDKFD-DWIRIEVTKGDLIIIPAGIYH 129 (178)
Q Consensus 62 vv~l~~~~~p~~e~~~----------~~f~~eH~H~~-dEi~~il~G~g~f~v~~~~d-~~~ri~~~~GDli~vPaG~~H 129 (178)
+..++...+|....+- ......|+|+. .|+.||++|+++..+-+.++ +++.-.+++||+++||+|..|
T Consensus 307 v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H 386 (466)
T 3kgl_A 307 ISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSV 386 (466)
T ss_dssp EEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred EEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEECCCCeE
Confidence 3445556677655221 12578999987 79999999999999998654 467788999999999999999
Q ss_pred eeecCCCCcEEEEEEeecC
Q psy840 130 RFTLDINNYVKAKRYFIGE 148 (178)
Q Consensus 130 ~f~~~~~~~~~alrlF~~~ 148 (178)
.-.++ +..+..+-+|++.
T Consensus 387 ~~~ag-~e~~~~l~~f~s~ 404 (466)
T 3kgl_A 387 VKRAT-SEQFRWIEFKTNA 404 (466)
T ss_dssp EEEEC-SSEEEEEEEESSS
T ss_pred EEEcC-CCCEEEEEEECCC
Confidence 87554 4558888888764
No 93
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.27 E-value=1.3e-06 Score=76.26 Aligned_cols=50 Identities=20% Similarity=0.272 Sum_probs=44.1
Q ss_pred ccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCC
Q psy840 81 YTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDI 135 (178)
Q Consensus 81 ~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~ 135 (178)
-..|.|+..|++||++|+|++.|+ ++ ++.+++||+++||+++.|.+.+++
T Consensus 281 ~~~H~h~~~ev~~v~~G~g~~~v~---~~--~~~~~~GD~~~vP~~~~H~~~n~e 330 (354)
T 2d40_A 281 SRVARTTDSTIYHVVEGSGQVIIG---NE--TFSFSAKDIFVVPTWHGVSFQTTQ 330 (354)
T ss_dssp CCCBEESSCEEEEEEEEEEEEEET---TE--EEEEETTCEEEECTTCCEEEEEEE
T ss_pred CCceecCCcEEEEEEeCeEEEEEC---CE--EEEEcCCCEEEECCCCeEEEEeCC
Confidence 456999999999999999999994 32 599999999999999999998753
No 94
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.24 E-value=3.5e-06 Score=71.02 Aligned_cols=54 Identities=22% Similarity=0.313 Sum_probs=45.8
Q ss_pred ceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEE
Q psy840 83 EHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKA 141 (178)
Q Consensus 83 eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~a 141 (178)
.|+|..+|..|||+|+|.+.+. |+| +.+++||+|.+++|..|+|.+.++..+.-
T Consensus 207 ~~~h~~e~~~~il~G~~~~~~~---~~~--~~v~~GD~~~~~~~~~h~~~n~g~~~~~y 260 (278)
T 1sq4_A 207 AETHVMEHGLYVLEGKAVYRLN---QDW--VEVEAGDFMWLRAFCPQACYSGGPGRFRY 260 (278)
T ss_dssp CCCCSEEEEEEEEECEEEEEET---TEE--EEEETTCEEEEEESCCEEEECCSSSCEEE
T ss_pred CCCCCccEEEEEEeCEEEEEEC---CEE--EEeCCCCEEEECCCCCEEEEcCCCCCEEE
Confidence 3668889999999999999984 566 89999999999999999999876655433
No 95
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.20 E-value=6.5e-06 Score=74.82 Aligned_cols=86 Identities=15% Similarity=0.219 Sum_probs=66.7
Q ss_pred EEEEcCCCCCCHHHH-h---------hhhccceecCc-ceEEEEecceEEEEEEeCCC-cEEEEEEeCCcEEEeCCCCee
Q psy840 62 EITCSKDCLPNYEEK-L---------KSFYTEHLHTD-EEIRLVLDGSGYFDVRDKFD-DWIRIEVTKGDLIIIPAGIYH 129 (178)
Q Consensus 62 vv~l~~~~~p~~e~~-~---------~~f~~eH~H~~-dEi~~il~G~g~f~v~~~~d-~~~ri~~~~GDli~vPaG~~H 129 (178)
+..++...+|.+..+ + ......|+|+. .|+.||++|+++..+-+.++ +.+.-.+++||+++||+|..|
T Consensus 307 v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g~~h 386 (465)
T 3qac_A 307 LTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQNFAI 386 (465)
T ss_dssp EEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEE
T ss_pred EEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCCcEE
Confidence 344566667776653 1 13578999998 89999999999999998654 577778999999999999999
Q ss_pred eeecCCCCcEEEEEEeecC
Q psy840 130 RFTLDINNYVKAKRYFIGE 148 (178)
Q Consensus 130 ~f~~~~~~~~~alrlF~~~ 148 (178)
.-.++ +..+..+-+|+..
T Consensus 387 ~~~ag-~e~~~~l~f~~s~ 404 (465)
T 3qac_A 387 VKQAF-EDGFEWVSFKTSE 404 (465)
T ss_dssp EEEEE-EEEEEEEEEESST
T ss_pred EEEcC-CCCeEEEEEecCC
Confidence 87665 4457788888653
No 96
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=98.20 E-value=4.5e-06 Score=74.79 Aligned_cols=75 Identities=16% Similarity=0.289 Sum_probs=56.4
Q ss_pred cCCCeeeEEEEcCCCCCCHHHHhhhhccceecCc-ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeec
Q psy840 55 RNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTL 133 (178)
Q Consensus 55 ~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~-dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~ 133 (178)
.+|... .+++.|. .++..| |++ +|+.||++|+|...+-..++ .....+++||+++||+|+.||...
T Consensus 42 ~~~~l~-~~~l~p~----------gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~~~-~~~~~l~~GDv~~~P~G~~h~~~N 108 (418)
T 3s7i_A 42 QNHRIV-QIEAKPN----------TLVLPK-HADADNILVIQQGQATVTVANGNN-RKSFNLDEGHALRIPSGFISYILN 108 (418)
T ss_dssp TTCEEE-EEEECTT----------EEEEEE-EESEEEEEEEEESEEEEEEECSSC-EEEEEEETTEEEEECTTCEEEEEE
T ss_pred cceEEE-EEEecCC----------ceeeee-eCCCCeEEEEEEeeEEEEEEecCC-EEEEEecCCCEEEECCCCeEEEEe
Confidence 456533 4556654 467788 766 99999999999999987544 446899999999999999999877
Q ss_pred -CCCCcEEEE
Q psy840 134 -DINNYVKAK 142 (178)
Q Consensus 134 -~~~~~~~al 142 (178)
+++..+..+
T Consensus 109 ~g~~~~l~i~ 118 (418)
T 3s7i_A 109 RHDNQNLRVA 118 (418)
T ss_dssp CCSSCCEEEE
T ss_pred cCCCccEEEE
Confidence 444455444
No 97
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=98.18 E-value=2e-06 Score=62.15 Aligned_cols=62 Identities=13% Similarity=0.046 Sum_probs=45.7
Q ss_pred ccceecCcc-eEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEE
Q psy840 81 YTEHLHTDE-EIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRY 144 (178)
Q Consensus 81 ~~eH~H~~d-Ei~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrl 144 (178)
..+|.|+.+ ++.++++|++.+... ++++..+.+++||.+.+|+|+.|++.+.++..+..+-+
T Consensus 30 ~~~H~H~~~~~iv~v~~G~~~~~~~--dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~v 92 (98)
T 2ozi_A 30 TGHHTHGMDYVVVPMADGEMTIVAP--DGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp CCSEECCSCEEEEESSCBC-CEECT--TSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cCcEeCCCCEEEEEEeeEEEEEEeC--CCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEEE
Confidence 479999976 555566777776653 34433478999999999999999999877766655544
No 98
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.16 E-value=3.7e-06 Score=69.59 Aligned_cols=54 Identities=15% Similarity=0.169 Sum_probs=43.8
Q ss_pred CcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEe
Q psy840 87 TDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYF 145 (178)
Q Consensus 87 ~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF 145 (178)
..+|+.||++|++.+.+.+ + ...+++||.+.+|+|+.|++...++..++.+-+.
T Consensus 80 ~~ee~~~Vl~G~l~~~~~~---~--~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~v~ 133 (261)
T 1rc6_A 80 GIETFLYVISGNITAKAEG---K--TFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYK 133 (261)
T ss_dssp TEEEEEEEEESEEEEEETT---E--EEEEETTEEEEECTTCCCEEEECSSSCEEEEEEE
T ss_pred CceEEEEEEEeEEEEEECC---E--EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEE
Confidence 4589999999999999954 3 3899999999999999999988766555544443
No 99
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.14 E-value=5.8e-06 Score=74.27 Aligned_cols=67 Identities=16% Similarity=0.231 Sum_probs=55.4
Q ss_pred hccceecCc-ceEEEEecceEEEEEEeCCC-------------cEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEe
Q psy840 80 FYTEHLHTD-EEIRLVLDGSGYFDVRDKFD-------------DWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYF 145 (178)
Q Consensus 80 f~~eH~H~~-dEi~~il~G~g~f~v~~~~d-------------~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF 145 (178)
....|+|+. .|+.||++|+|.+.+.+.++ +.+.-.+++||+++||+|..|+....+ .+..+-+|
T Consensus 278 m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~~--~~~~v~f~ 355 (434)
T 2ea7_A 278 LLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINATS--NLNFFAFG 355 (434)
T ss_dssp EEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEESS--SEEEEEEE
T ss_pred eeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcCC--CeEEEEEE
Confidence 478999997 89999999999999987543 155558999999999999999998874 37777777
Q ss_pred ecC
Q psy840 146 IGE 148 (178)
Q Consensus 146 ~~~ 148 (178)
...
T Consensus 356 ~~~ 358 (434)
T 2ea7_A 356 INA 358 (434)
T ss_dssp ETC
T ss_pred CCC
Confidence 654
No 100
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=98.13 E-value=6.5e-06 Score=73.79 Aligned_cols=67 Identities=16% Similarity=0.253 Sum_probs=53.8
Q ss_pred hccceecCc-ceEEEEecceEEEEEEeCCC-------------------------cEEEEEEeCCcEEEeCCCCeeeeec
Q psy840 80 FYTEHLHTD-EEIRLVLDGSGYFDVRDKFD-------------------------DWIRIEVTKGDLIIIPAGIYHRFTL 133 (178)
Q Consensus 80 f~~eH~H~~-dEi~~il~G~g~f~v~~~~d-------------------------~~~ri~~~~GDli~vPaG~~H~f~~ 133 (178)
....|+|+. .|+.||++|+|.+.+-+..+ +.+.-.+++||+++||+|..||...
T Consensus 275 ~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~ 354 (418)
T 3s7i_A 275 LMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINA 354 (418)
T ss_dssp EEEEEEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEE
T ss_pred eeCceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEEC
Confidence 477899976 89999999999998875432 4677899999999999999999887
Q ss_pred CCCCcEEEEEEeecC
Q psy840 134 DINNYVKAKRYFIGE 148 (178)
Q Consensus 134 ~~~~~~~alrlF~~~ 148 (178)
+++ +..+-|+++.
T Consensus 355 ~~~--l~~v~f~~~~ 367 (418)
T 3s7i_A 355 SSE--LHLLGFGINA 367 (418)
T ss_dssp SSC--EEEEEEEESC
T ss_pred CCC--EEEEEEEcCC
Confidence 653 6666555443
No 101
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.09 E-value=6.7e-06 Score=68.67 Aligned_cols=52 Identities=10% Similarity=0.054 Sum_probs=42.8
Q ss_pred cCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEE
Q psy840 86 HTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAK 142 (178)
Q Consensus 86 H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~al 142 (178)
|..+|+.||++|++.+.+.+ + ...+++||.+.+|+|+.|++.+..+..++.+
T Consensus 82 ~~~ee~~~Vl~G~l~~~~~~---~--~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l 133 (274)
T 1sef_A 82 DGIQTLVYVIDGRLRVSDGQ---E--THELEAGGYAYFTPEMKMYLANAQEADTEVF 133 (274)
T ss_dssp TTEEEEEEEEESEEEEECSS---C--EEEEETTEEEEECTTSCCEEEESSSSCEEEE
T ss_pred CCceEEEEEEEeEEEEEECC---E--EEEECCCCEEEECCCCCEEEEeCCCCCEEEE
Confidence 34589999999999999964 3 3899999999999999999988765544444
No 102
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=98.07 E-value=1e-05 Score=73.48 Aligned_cols=97 Identities=13% Similarity=0.127 Sum_probs=70.6
Q ss_pred hcCee-EEeeChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCC-c---
Q psy840 35 LTGVE-YFNVQDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFD-D--- 109 (178)
Q Consensus 35 ~lGv~-~~~~~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d-~--- 109 (178)
+-|+. +|.-.++.|+-+ ||.. -.+++.|. .+...|+|+..|+.||++|+|++.+-..+. .
T Consensus 24 e~G~~e~w~~~~~~L~~~----gvs~-~r~~i~p~----------Gl~lPh~~~a~e~~~V~~G~g~~G~v~pgc~et~~ 88 (466)
T 3kgl_A 24 EAGRIEVWDHHAPQLRCS----GVSF-VRYIIESK----------GLYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQ 88 (466)
T ss_dssp TTEEEEECCTTSHHHHHH----TEEE-EEEEECTT----------EEEEEEEESSCEEEEEEECEEEEEEECTTCCCCEE
T ss_pred CCcEEEEECCCChhhccC----CeEE-EEEEECCC----------CEeCCeeCCCCeEEEEEeCeEEEEEecCCCcchhh
Confidence 34544 365545555543 7753 33445553 568899999999999999999998764310 0
Q ss_pred --------------------------------------------------------EEEEEEeCCcEEEeCCCCeeeeec
Q psy840 110 --------------------------------------------------------WIRIEVTKGDLIIIPAGIYHRFTL 133 (178)
Q Consensus 110 --------------------------------------------------------~~ri~~~~GDli~vPaG~~H~f~~ 133 (178)
-| ..+++||+|.||||+.||...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv-~~l~~GDvi~iPaG~~~~~~N 167 (466)
T 3kgl_A 89 DSSVFQPGGGSPFGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKV-EHIRTGDTIATHPGVAQWFYN 167 (466)
T ss_dssp ECCSSCCCC-----------------------------------------CCEEESCE-EEEETTEEEEECTTCEEEEEC
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccceee-ccccCCCEEEECCCCcEEEEe
Confidence 11 378999999999999999999
Q ss_pred CCCCcEEEEEEeec
Q psy840 134 DINNYVKAKRYFIG 147 (178)
Q Consensus 134 ~~~~~~~alrlF~~ 147 (178)
+.+..+.++-++..
T Consensus 168 ~g~e~L~~l~~~d~ 181 (466)
T 3kgl_A 168 DGNQPLVIVSVLDL 181 (466)
T ss_dssp CSSSCEEEEEEEES
T ss_pred CCCCcEEEEEEEcC
Confidence 88888888888754
No 103
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.05 E-value=7.4e-06 Score=65.89 Aligned_cols=65 Identities=18% Similarity=0.111 Sum_probs=49.6
Q ss_pred eeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcE
Q psy840 60 EDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYV 139 (178)
Q Consensus 60 ~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~ 139 (178)
.-++.+.++ ..++.|+|...|+.|||+|+.. +++ -.+.+||++.+|+|+.|.+..+++..+
T Consensus 127 v~l~~~~pG----------~~~p~H~H~g~E~~~VL~G~f~----de~-----~~~~~Gd~~~~p~g~~H~p~a~~~~gc 187 (195)
T 2q1z_B 127 ARLLWIPGG----------QAVPDHGHRGLELTLVLQGAFR----DET-----DRFGAGDIEIADQELEHTPVAERGLDC 187 (195)
T ss_dssp EEEEEECTT----------CBCCCCCCSSCEEEEEEESEEE----CSS-----SEEETTCEEEECSSCCCCCEECSSSCE
T ss_pred EEEEEECCC----------CCCCCcCCCCeEEEEEEEEEEE----CCc-----EEECCCeEEEeCcCCccCCEeCCCCCE
Confidence 346666664 3478999999999999999833 433 479999999999999999988644444
Q ss_pred EEEE
Q psy840 140 KAKR 143 (178)
Q Consensus 140 ~alr 143 (178)
.++-
T Consensus 188 ~~l~ 191 (195)
T 2q1z_B 188 ICLA 191 (195)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 104
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.04 E-value=2.6e-05 Score=70.30 Aligned_cols=67 Identities=12% Similarity=0.212 Sum_probs=55.1
Q ss_pred hccceecCc-ceEEEEecceEEEEEEeCCC---------c--EEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeec
Q psy840 80 FYTEHLHTD-EEIRLVLDGSGYFDVRDKFD---------D--WIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIG 147 (178)
Q Consensus 80 f~~eH~H~~-dEi~~il~G~g~f~v~~~~d---------~--~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~ 147 (178)
....|+|+. .|+.||++|+++..+-+.++ + .+...+++||+++||+|..|.-..++ .+..+-|++.
T Consensus 293 m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~~--~~~~v~f~~~ 370 (445)
T 2cav_A 293 LFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVN 370 (445)
T ss_dssp EEEEEEESSCEEEEEEEESCEEEEEEEC-----------CCEEEEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEES
T ss_pred eeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcCC--CeEEEEEEcc
Confidence 588999998 99999999999999988653 3 57889999999999999999988873 3666666644
Q ss_pred C
Q psy840 148 E 148 (178)
Q Consensus 148 ~ 148 (178)
.
T Consensus 371 ~ 371 (445)
T 2cav_A 371 A 371 (445)
T ss_dssp C
T ss_pred C
Confidence 4
No 105
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.02 E-value=7.9e-06 Score=69.32 Aligned_cols=67 Identities=12% Similarity=0.047 Sum_probs=51.1
Q ss_pred cceecCcceEEEEecceEEEEEE-eCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEE-EEeecCCceee
Q psy840 82 TEHLHTDEEIRLVLDGSGYFDVR-DKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAK-RYFIGEPVWTP 153 (178)
Q Consensus 82 ~eH~H~~dEi~~il~G~g~f~v~-~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~al-rlF~~~~gW~~ 153 (178)
..|.|..+|+.||++|++.+.+. ++. ..+++||.+.+|+|..|++...+...+..+ +-|..-+|..|
T Consensus 84 ~~~~h~~EEfiyVleG~l~l~l~~g~~-----~~L~~Gds~y~p~~~~H~~~N~~~Ar~l~V~k~y~~~~g~~p 152 (266)
T 4e2q_A 84 GLPPQDIERLIFVVEGAVTLTNTSSSS-----KKLTVDSYAYLPPNFHHSLDCVESATLVVFERRYEYLGSHTT 152 (266)
T ss_dssp CCCCTTEEEEEEEEEECEEEEC--CCC-----EEECTTEEEEECTTCCCEEEESSCEEEEEEEEECCCCTTCCC
T ss_pred CCCCCCCeEEEEEEEEEEEEEECCCcE-----EEEcCCCEEEECCCCCEEEEeCCCEEEEEEEeEeeeCCCCCC
Confidence 45888889999999999999997 543 899999999999999999998654333322 44555566433
No 106
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.02 E-value=6.2e-06 Score=72.93 Aligned_cols=51 Identities=14% Similarity=0.335 Sum_probs=45.9
Q ss_pred ccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCC
Q psy840 81 YTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDIN 136 (178)
Q Consensus 81 ~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~ 136 (178)
-..|.|...+|++|++|+|+..|++ + ++.+++||+++||+++.|++..+++
T Consensus 292 t~~hRht~s~Vy~V~eG~G~~~I~~---~--~~~w~~gD~fvvP~w~~h~~~n~~~ 342 (368)
T 3nw4_A 292 TATRNEVGSTVFQVFEGAGAVVMNG---E--TTKLEKGDMFVVPSWVPWSLQAETQ 342 (368)
T ss_dssp CCCEEESSCEEEEEEESCEEEEETT---E--EEEECTTCEEEECTTCCEEEEESSS
T ss_pred cCCeeccccEEEEEEeCcEEEEECC---E--EEEecCCCEEEECCCCcEEEEeCCC
Confidence 5789999999999999999999954 2 4999999999999999999988754
No 107
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=97.97 E-value=1.1e-05 Score=64.65 Aligned_cols=59 Identities=25% Similarity=0.326 Sum_probs=45.7
Q ss_pred hhccceecCc-------ceEEEEecceEEEEEEeCCC----------------cEEEEEEeCCcEEEeCCCCeeeeecCC
Q psy840 79 SFYTEHLHTD-------EEIRLVLDGSGYFDVRDKFD----------------DWIRIEVTKGDLIIIPAGIYHRFTLDI 135 (178)
Q Consensus 79 ~f~~eH~H~~-------dEi~~il~G~g~f~v~~~~d----------------~~~ri~~~~GDli~vPaG~~H~f~~~~ 135 (178)
+..++|.|+. .|-++++.|.+++.+.++.- .+-.+.++|||.+.||+|++|||.+++
T Consensus 64 Q~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIppg~~H~f~age 143 (175)
T 2y0o_A 64 QTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIPPNTKHWFQAGE 143 (175)
T ss_dssp CEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEECTTCCEEEEEEE
T ss_pred CcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEECCCCcEEEEeCC
Confidence 3468999986 56666999999998854221 013479999999999999999999865
Q ss_pred CC
Q psy840 136 NN 137 (178)
Q Consensus 136 ~~ 137 (178)
++
T Consensus 144 eg 145 (175)
T 2y0o_A 144 EG 145 (175)
T ss_dssp EE
T ss_pred CC
Confidence 44
No 108
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.96 E-value=2.2e-05 Score=64.22 Aligned_cols=64 Identities=14% Similarity=0.143 Sum_probs=50.3
Q ss_pred eeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecC
Q psy840 60 EDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLD 134 (178)
Q Consensus 60 ~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~ 134 (178)
.+++.+.... ...+..|.|++-|+.||++|+|. .+.++.... ..+.+||+++||+|..|.+...
T Consensus 9 ~~~~~~~~~~--------~~~~~~~~~~~~~i~~v~~G~~~-~i~~~~~~~--~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 9 TNVYRMSKFD--------TYIFNNLYINDYKMFWIDSGIAK-LIDKNCLVS--YEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp EEEEEECTTC--------EEEEEEEECSSCEEEEESSSCEE-EEETTTTEE--EEECTTEEEEECTTCEEEEEEE
T ss_pred hhhhhhhccc--------chhccHhhhcceEEEEEecCceE-EECCcccee--EEEcCCCEEEEcCCCceeeccc
Confidence 3555655442 34578999999999999999999 887641102 7999999999999999999776
No 109
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.95 E-value=2.2e-05 Score=59.04 Aligned_cols=52 Identities=21% Similarity=0.391 Sum_probs=43.4
Q ss_pred ccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCC
Q psy840 81 YTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDIN 136 (178)
Q Consensus 81 ~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~ 136 (178)
+.++.+.++|..|||+|++.+...+ +. .+.+++||++++|+|..-..+..+.
T Consensus 54 ~~~~~~~~~E~~~iLeG~~~lt~dd--G~--~~~l~aGD~~~~P~G~~gtWev~e~ 105 (116)
T 3es4_A 54 YNYAGRDLEETFVVVEGEALYSQAD--AD--PVKIGPGSIVSIAKGVPSRLEILSS 105 (116)
T ss_dssp EEECCCSEEEEEEEEECCEEEEETT--CC--CEEECTTEEEEECTTCCEEEEECSC
T ss_pred eECeeCCCcEEEEEEEeEEEEEeCC--Ce--EEEECCCCEEEECCCCeEEEEEeEE
Confidence 4556666789999999999988754 33 3899999999999999999988876
No 110
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=97.95 E-value=7.7e-06 Score=64.14 Aligned_cols=69 Identities=14% Similarity=0.095 Sum_probs=52.9
Q ss_pred CeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecC--C
Q psy840 58 NYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLD--I 135 (178)
Q Consensus 58 ~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~--~ 135 (178)
...-++++.|+. .++.|.|+..|..|||+|+..|+ +.+ ..+++||++..|+|..|..... +
T Consensus 42 ~~v~lvr~~pG~----------~~p~H~H~g~ee~~VL~G~~~~~---e~~----~~~~~Gd~~~~P~g~~H~~~~~~~~ 104 (159)
T 3ebr_A 42 ETITLLKAPAGM----------EMPRHHHTGTVIVYTVQGSWRYK---EHD----WVAHAGSVVYETASTRHTPQSAYAE 104 (159)
T ss_dssp EEEEEEEECSSC----------BCCCEEESSCEEEEEEESCEEET---TSS----CCBCTTCEEEECSSEEECEEESSSS
T ss_pred eEEEEEEECCCC----------CcccccCCCCEEEEEEEeEEEEe---CCC----eEECCCeEEEECCCCcceeEeCCCC
Confidence 355778887763 37899999999999999997764 233 3789999999999999999877 4
Q ss_pred CCcEEEEE
Q psy840 136 NNYVKAKR 143 (178)
Q Consensus 136 ~~~~~alr 143 (178)
+..+.++-
T Consensus 105 ~e~~~~~~ 112 (159)
T 3ebr_A 105 GPDIITFN 112 (159)
T ss_dssp SSCEEEEE
T ss_pred CCCEEEEE
Confidence 44444444
No 111
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=97.78 E-value=5.4e-05 Score=69.79 Aligned_cols=34 Identities=26% Similarity=0.333 Sum_probs=29.9
Q ss_pred EEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEee
Q psy840 113 IEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFI 146 (178)
Q Consensus 113 i~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~ 146 (178)
..+++||+|.||||+.||...+++..++++-++.
T Consensus 174 ~~vr~GDviaiPaG~~~w~yN~G~~~l~iv~~~D 207 (531)
T 3fz3_A 174 RRIREGDVVAIPAGVAYWSYNDGDQELVAVNLFH 207 (531)
T ss_dssp EEEETTEEEEECTTCCEEEECCSSSCEEEEEEEE
T ss_pred ecccCCcEEEECCCCeEEEEeCCCceEEEEEEEc
Confidence 4679999999999999999999888888887763
No 112
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=97.71 E-value=6.6e-05 Score=59.25 Aligned_cols=60 Identities=18% Similarity=0.290 Sum_probs=47.6
Q ss_pred eeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCC
Q psy840 60 EDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDI 135 (178)
Q Consensus 60 ~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~ 135 (178)
.-++.+.|+. .++.|.|+..|..|||+|+..+. + .+. ..+++||.+.+|+|..|.+...+
T Consensus 45 v~lvr~~pG~----------~~p~H~H~g~ee~~VL~G~f~~~--~-~~~---~~~~aGd~~~~P~g~~H~~~a~~ 104 (165)
T 3cjx_A 45 VMRASFAPGL----------TLPLHFHTGTVHMYTISGCWYYT--E-YPG---QKQTAGCYLYEPGGSIHQFNTPR 104 (165)
T ss_dssp EEEEEECTTC----------BCCEEEESSCEEEEEEESEEEET--T-CTT---SCEETTEEEEECTTCEECEECCT
T ss_pred EEEEEECCCC----------cCCcccCCCCEEEEEEEEEEEEC--C-Cce---EEECCCeEEEeCCCCceeeEeCC
Confidence 4677777653 36899999999999999998762 2 112 46899999999999999998755
No 113
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=97.64 E-value=3.5e-05 Score=63.46 Aligned_cols=42 Identities=24% Similarity=0.317 Sum_probs=38.1
Q ss_pred cceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecC
Q psy840 88 DEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLD 134 (178)
Q Consensus 88 ~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~ 134 (178)
.+|+.||++|++.+.+.++ ...+++||.+.+|+|+.|++...
T Consensus 68 ~ee~~~Vl~G~~~~~~~~~-----~~~l~~Gd~~~~p~~~~H~~~n~ 109 (246)
T 1sfn_A 68 YQRFAFVLSGEVDVAVGGE-----TRTLREYDYVYLPAGEKHMLTAK 109 (246)
T ss_dssp SEEEEEEEEEEEEEECSSC-----EEEECTTEEEEECTTCCCEEEEE
T ss_pred eeEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeC
Confidence 7899999999999999653 28999999999999999999876
No 114
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.64 E-value=0.00012 Score=60.23 Aligned_cols=63 Identities=19% Similarity=0.160 Sum_probs=48.4
Q ss_pred eeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcE
Q psy840 60 EDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYV 139 (178)
Q Consensus 60 ~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~ 139 (178)
.-++++.|+ ..++.|+|+..|..|||+|+.. +++ -.+.+||++.+|+|+.|.... ++.++
T Consensus 45 ~~lvr~~pG----------~~~p~H~H~g~Ee~~VL~G~f~----d~~-----~~~~~Gd~~~~P~g~~H~p~a-~~gc~ 104 (223)
T 3o14_A 45 TSIVRYAPG----------SRFSAHTHDGGEEFIVLDGVFQ----DEH-----GDYPAGTYVRNPPTTSHVPGS-AEGCT 104 (223)
T ss_dssp EEEEEECTT----------EECCCEECTTCEEEEEEEEEEE----ETT-----EEEETTEEEEECTTCEECCEE-SSCEE
T ss_pred EEEEEECCC----------CCcccccCCCCEEEEEEEeEEE----ECC-----eEECCCeEEEeCCCCccccEe-CCCCE
Confidence 346777765 3478999999999999999953 333 589999999999999999887 44444
Q ss_pred EEE
Q psy840 140 KAK 142 (178)
Q Consensus 140 ~al 142 (178)
.-+
T Consensus 105 ~~v 107 (223)
T 3o14_A 105 IFV 107 (223)
T ss_dssp EEE
T ss_pred EEE
Confidence 333
No 115
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.61 E-value=9.9e-05 Score=61.67 Aligned_cols=48 Identities=17% Similarity=0.221 Sum_probs=40.8
Q ss_pred ecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCC
Q psy840 85 LHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINN 137 (178)
Q Consensus 85 ~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~ 137 (178)
.++.+|+.|||+|+...... ++ .+.+++||+++||+|+.|+++..+.-
T Consensus 62 ~~p~dE~~~VleG~~~lt~~---g~--~~~~~~Gd~~~ip~G~~~~w~~~~~~ 109 (238)
T 3myx_A 62 AYPYTEMLVMHRGSVTLTSG---TD--SVTLSTGESAVIGRGTQVRIDAQPES 109 (238)
T ss_dssp SCSSEEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTCCEEEEECTTE
T ss_pred cCCCcEEEEEEEeEEEEECC---Ce--EEEEcCCCEEEECCCCEEEEEecCCe
Confidence 45569999999999988773 33 48999999999999999999998863
No 116
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=97.41 E-value=0.00024 Score=55.76 Aligned_cols=80 Identities=13% Similarity=0.125 Sum_probs=55.1
Q ss_pred hcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeec
Q psy840 54 DRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTL 133 (178)
Q Consensus 54 ~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~ 133 (178)
+.| .+.-+++..++ ..|..|.|+..|..|||+|+..+.-++..+.| .+++|+++.-|+|..|....
T Consensus 43 e~g-~~t~lvr~~pG----------~~~p~H~H~g~ee~~VL~G~~~~~~Gd~~~~~---~~~aGsYv~ePpGs~H~p~~ 108 (153)
T 3bal_A 43 ETS-SWTAIFNCPAG----------SSFASHIHAGPGEYFLTKGKMEVRGGEQEGGS---TAYAPSYGFESSGALHGKTF 108 (153)
T ss_dssp TTT-EEEEEEEECTT----------EEECCEEESSCEEEEEEESEEEETTCGGGTSE---EEESSEEEEECTTCEESCCE
T ss_pred ccc-eEEEEEEeCCC----------CCccCccCCCCEEEEEEEEEEEecCccccCcc---ccCCCeEEEcCCCCccccee
Confidence 345 35677777764 45899999999999999999876544321233 67999999999999998544
Q ss_pred CCCCcEEEEEEeecC
Q psy840 134 DINNYVKAKRYFIGE 148 (178)
Q Consensus 134 ~~~~~~~alrlF~~~ 148 (178)
.++..+ ++-++.++
T Consensus 109 ~~~~~~-~~~~~~Gp 122 (153)
T 3bal_A 109 FPVESQ-FYMTFLGP 122 (153)
T ss_dssp ESSCEE-EEEEEESC
T ss_pred CCCCeE-EEEEEECC
Confidence 333332 33334444
No 117
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=97.37 E-value=0.00061 Score=57.52 Aligned_cols=64 Identities=25% Similarity=0.291 Sum_probs=49.1
Q ss_pred ccceecCc-ceEEEEecceEEEEEEeCC-CcEEEEEE--eCCcEEEeCCCCeeeeecCCCCcEEEEEE
Q psy840 81 YTEHLHTD-EEIRLVLDGSGYFDVRDKF-DDWIRIEV--TKGDLIIIPAGIYHRFTLDINNYVKAKRY 144 (178)
Q Consensus 81 ~~eH~H~~-dEi~~il~G~g~f~v~~~~-d~~~ri~~--~~GDli~vPaG~~H~f~~~~~~~~~alrl 144 (178)
-.+|.|.. .|.++|++|++.+++++.. ++|+.+.+ +..+.+.||+|..|-|...++..+..|-+
T Consensus 285 rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~~~ 352 (369)
T 3st7_A 285 KGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMW 352 (369)
T ss_dssp EEEEECSSCCEEEEEEESEEEEEEEETTCCCCEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEEEE
T ss_pred eccccccCcceEEEEEeeeEEEEEEcCCCCcEEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEEEe
Confidence 57899987 7999999999999998754 46754444 23399999999999998877555544433
No 118
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=96.90 E-value=0.0016 Score=54.36 Aligned_cols=48 Identities=17% Similarity=0.277 Sum_probs=39.9
Q ss_pred ecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCC
Q psy840 85 LHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDIN 136 (178)
Q Consensus 85 ~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~ 136 (178)
.|..+|..|||+|++.+... ++. .+.+++||++++|+|..=.++..+.
T Consensus 183 ~~~~~E~~~ILeG~v~lt~~--~G~--~~~~~aGD~~~~P~G~~~tWev~e~ 230 (238)
T 3myx_A 183 PHKIHELMNLIEGRVVLSLE--NGS--SLTVNTGDTVFVAQGAPCKWTSTGY 230 (238)
T ss_dssp ECSSCEEEEEEECCEEEEET--TSC--EEEECTTCEEEECTTCEEEEEESSC
T ss_pred cCCCCEEEEEEEeEEEEEeC--CCC--EEEECCCCEEEECCCCEEEEEECcc
Confidence 34678999999999988764 344 4899999999999999988887764
No 119
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=96.79 E-value=0.0061 Score=46.91 Aligned_cols=57 Identities=16% Similarity=0.172 Sum_probs=44.4
Q ss_pred hccceecCc-ceEEEEecceEEEEEEeCCCcEEEEEEeCCcE-EEeCCCCeeeeecCCCC
Q psy840 80 FYTEHLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDL-IIIPAGIYHRFTLDINN 137 (178)
Q Consensus 80 f~~eH~H~~-dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDl-i~vPaG~~H~f~~~~~~ 137 (178)
.-.+|.|.. .|.+++++|+..+.+.+.. ..-++.+...+. |.||+|+.|.+..-+++
T Consensus 47 ~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~-~~~~~~L~~~~~gL~IppgvWh~~~~~s~~ 105 (141)
T 2pa7_A 47 PRGFHAHKKLEQVLVCLNGSCRVILDDGN-IIQEITLDSPAVGLYVGPAVWHEMHDFSSD 105 (141)
T ss_dssp CEEEEEESSCCEEEEEEESCEEEEEECSS-CEEEEEECCTTEEEEECTTCEEEEECCCTT
T ss_pred EECcCcCCCceEEEEEEccEEEEEEECCc-EEEEEEECCCCcEEEeCCCEEEEEEEcCCC
Confidence 357999987 8999999999999996522 233566666555 99999999999876655
No 120
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=96.57 E-value=0.0029 Score=50.41 Aligned_cols=106 Identities=10% Similarity=0.093 Sum_probs=73.0
Q ss_pred hcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceE-EEEEEeCCCcEEEEE----EeCCcE--EEeCCC
Q psy840 54 DRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSG-YFDVRDKFDDWIRIE----VTKGDL--IIIPAG 126 (178)
Q Consensus 54 ~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g-~f~v~~~~d~~~ri~----~~~GDl--i~vPaG 126 (178)
.|...+.-.+-|.++. +-.+|....+||.++..|.+ .+.+-..++...++. +.+|+. ++||+|
T Consensus 45 ~R~~~T~IYfLL~~g~----------~S~~HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge~pQ~vVP~G 114 (170)
T 1yud_A 45 SRQLWSSIYFLLRTGE----------VSHFHRLTADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGERPQFLVPKG 114 (170)
T ss_dssp SSBSCEEEEEEEETTC----------CEEEEECSSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTEESCEEECTT
T ss_pred CCccceEEEEEECCCC----------CCeeEEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCceeEEEECCC
Confidence 4666666666777652 35789988899999999997 676766667765555 456888 999999
Q ss_pred CeeeeecCCCCcEEEEEEeecCCceeecCCC---CCchHHHHHHHHHH
Q psy840 127 IYHRFTLDINNYVKAKRYFIGEPVWTPHNRP---ADDMECRLEYLKKI 171 (178)
Q Consensus 127 ~~H~f~~~~~~~~~alrlF~~~~gW~~~~r~---~d~~~~r~~yl~~~ 171 (178)
+.+.....+..+ ++-.+.=.|||..-.+. .+.+.+++|-.+.+
T Consensus 115 ~wqaa~~~~g~~--~LV~C~VaPGF~f~dfel~~~~~L~~~~P~~~~~ 160 (170)
T 1yud_A 115 CIFGSAMNQDGF--SLVGCMVSPGFTFDDFELFSQEALLAMYPQHKAV 160 (170)
T ss_dssp CEEEEEESSSSE--EEEEEEESSCCCGGGCCBCBHHHHHHSCCTTHHH
T ss_pred CEEEEEECCCCc--EEEEEEECCCccCCceEEcCHHHHHhHCchhHHH
Confidence 999987663343 55666677898865554 24444444444333
No 121
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=96.50 E-value=0.024 Score=43.15 Aligned_cols=72 Identities=11% Similarity=0.156 Sum_probs=54.8
Q ss_pred hhhccce----ecCc-ceEEEEecceEEEEEEeCCCc---EEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCC
Q psy840 78 KSFYTEH----LHTD-EEIRLVLDGSGYFDVRDKFDD---WIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEP 149 (178)
Q Consensus 78 ~~f~~eH----~H~~-dEi~~il~G~g~f~v~~~~d~---~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~ 149 (178)
+.|...| ||+. -+..-|++|+..|..-++++. --.+...+|+..+||++..|+...-+++-..-|.||..++
T Consensus 24 ~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~~f~leFyc~~~ 103 (127)
T 3bb6_A 24 AGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVAPE 103 (127)
T ss_dssp GGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTTCEEEEEEEECHH
T ss_pred HHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCCCEEEEEEEEeCCc
Confidence 7788888 6887 788999999999975443332 1347889999999999999999975554444578876654
No 122
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=96.12 E-value=0.063 Score=42.32 Aligned_cols=70 Identities=16% Similarity=0.137 Sum_probs=55.1
Q ss_pred hccceecCc-ceEEEEecceEEEEEEe-CCCc---EEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCC
Q psy840 80 FYTEHLHTD-EEIRLVLDGSGYFDVRD-KFDD---WIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEP 149 (178)
Q Consensus 80 f~~eH~H~~-dEi~~il~G~g~f~v~~-~~d~---~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~ 149 (178)
.-..|-|.. ..+.+|++|+....+-. .++. .-...+.+||.++.|+|-.|++....+.....|-+|.++-
T Consensus 81 ~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aVSlHvY~pp~ 155 (171)
T 3eqe_A 81 ETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVSLHVYSPPL 155 (171)
T ss_dssp BCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEEEEEEEESCC
T ss_pred CcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEEEEEEeCCCc
Confidence 457899997 68888999999976532 1221 1246789999999999999999887777788999998864
No 123
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=96.10 E-value=0.019 Score=46.52 Aligned_cols=58 Identities=16% Similarity=0.109 Sum_probs=47.2
Q ss_pred hccceecCcceEEEEec-ceEEEEEEeCC-----CcEEEEEEeCCcEEEeCCCCeeeeecCCCC
Q psy840 80 FYTEHLHTDEEIRLVLD-GSGYFDVRDKF-----DDWIRIEVTKGDLIIIPAGIYHRFTLDINN 137 (178)
Q Consensus 80 f~~eH~H~~dEi~~il~-G~g~f~v~~~~-----d~~~ri~~~~GDli~vPaG~~H~f~~~~~~ 137 (178)
.-..|.|...++..++. |+..--+-+-- ++|..+.+.++-.|.||+|..|-|..-+++
T Consensus 72 lRGlH~h~q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~ 135 (197)
T 1nxm_A 72 LRGLHAEPWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF 135 (197)
T ss_dssp EEEEEECSSCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE
T ss_pred cceeeecccceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC
Confidence 34789998899999999 99654333322 679999999999999999999999877765
No 124
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=96.03 E-value=0.057 Score=42.81 Aligned_cols=56 Identities=14% Similarity=0.089 Sum_probs=45.8
Q ss_pred ccceecCc-ceEEEEecceEEEEEEeC-C-----CcEEEEEEe---CCcEEEeCCCCeeeeecCCC
Q psy840 81 YTEHLHTD-EEIRLVLDGSGYFDVRDK-F-----DDWIRIEVT---KGDLIIIPAGIYHRFTLDIN 136 (178)
Q Consensus 81 ~~eH~H~~-dEi~~il~G~g~f~v~~~-~-----d~~~ri~~~---~GDli~vPaG~~H~f~~~~~ 136 (178)
=..|.|.. .+...++.|++..-+.+- . ++|..+.+. +.-.|.||+|..|-|..-++
T Consensus 66 RG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd 131 (174)
T 3ejk_A 66 KAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGD 131 (174)
T ss_dssp EEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTT
T ss_pred ECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccC
Confidence 46888875 899999999998877542 1 568889998 56789999999999987666
No 125
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=95.99 E-value=0.025 Score=45.23 Aligned_cols=57 Identities=19% Similarity=0.416 Sum_probs=44.3
Q ss_pred ccceec---CcceEEEEecceEE---EEEEeCC---CcEEEEEEeC--CcEEEeCCCCeeeeecCCCC
Q psy840 81 YTEHLH---TDEEIRLVLDGSGY---FDVRDKF---DDWIRIEVTK--GDLIIIPAGIYHRFTLDINN 137 (178)
Q Consensus 81 ~~eH~H---~~dEi~~il~G~g~---f~v~~~~---d~~~ri~~~~--GDli~vPaG~~H~f~~~~~~ 137 (178)
-..|.| ...++..++.|++. ++++... ++|..+.+.+ +-.|.||+|..|-|..-+++
T Consensus 61 RGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (185)
T 1ep0_A 61 RGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE 128 (185)
T ss_dssp EEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred ecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 467877 56899999999986 4444311 4798888876 57899999999999887765
No 126
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=95.93 E-value=0.028 Score=47.07 Aligned_cols=67 Identities=19% Similarity=0.207 Sum_probs=44.5
Q ss_pred hhccceecCc-ceEEEEecc---eEEEEEEeCC-------------CcE------EEEEEeCCcEEEeCCCCeeeeecCC
Q psy840 79 SFYTEHLHTD-EEIRLVLDG---SGYFDVRDKF-------------DDW------IRIEVTKGDLIIIPAGIYHRFTLDI 135 (178)
Q Consensus 79 ~f~~eH~H~~-dEi~~il~G---~g~f~v~~~~-------------d~~------~ri~~~~GDli~vPaG~~H~f~~~~ 135 (178)
+..++|.|.. .|-+...-| ..+....+++ |.. -.|.+.||+-|.||+|++|||...+
T Consensus 117 Q~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~Pg~~H~F~ae~ 196 (246)
T 3kmh_A 117 QVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLPPGLYHSFWAEA 196 (246)
T ss_dssp CEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEECTTEEEEEEECT
T ss_pred CCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecCCCCEEEEEecC
Confidence 3578999998 666655555 3344444322 111 1368899999999999999999888
Q ss_pred C-CcEEEEEEe
Q psy840 136 N-NYVKAKRYF 145 (178)
Q Consensus 136 ~-~~~~alrlF 145 (178)
. ..+..-.+.
T Consensus 197 g~G~vligEVS 207 (246)
T 3kmh_A 197 GFGDVLVGEVS 207 (246)
T ss_dssp TSCCEEEEEEE
T ss_pred CCccEEEEEcc
Confidence 6 345444443
No 127
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=95.85 E-value=0.032 Score=44.57 Aligned_cols=57 Identities=19% Similarity=0.323 Sum_probs=44.3
Q ss_pred ccceec---CcceEEEEecceEE---EEEEeCC---CcEEEEEEeC--CcEEEeCCCCeeeeecCCCC
Q psy840 81 YTEHLH---TDEEIRLVLDGSGY---FDVRDKF---DDWIRIEVTK--GDLIIIPAGIYHRFTLDINN 137 (178)
Q Consensus 81 ~~eH~H---~~dEi~~il~G~g~---f~v~~~~---d~~~ri~~~~--GDli~vPaG~~H~f~~~~~~ 137 (178)
-..|.| ...++..++.|++. ++++... ++|..+.+.+ +-.|.||+|..|-|..-+++
T Consensus 62 RG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 129 (184)
T 2ixk_A 62 RGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY 129 (184)
T ss_dssp EEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred eeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC
Confidence 467888 56899999999985 4444311 5798888876 57899999999999887765
No 128
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=95.84 E-value=0.013 Score=53.18 Aligned_cols=55 Identities=7% Similarity=0.036 Sum_probs=43.2
Q ss_pred CcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEee
Q psy840 87 TDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFI 146 (178)
Q Consensus 87 ~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~ 146 (178)
+.|++.++-+|++.+..+- | .+.++|||+++||.||.++..+.+..+.-++..|.
T Consensus 177 DGD~Livpq~G~l~i~TEf--G---~L~v~pgei~VIPRGi~frv~l~~p~Rgyi~E~~g 231 (471)
T 1eyb_A 177 DGDFLIVPQKGNLLIYTEF--G---KMLVQPNEICVIQRGMRFSIDVFEETRGYILEVYG 231 (471)
T ss_dssp SEEEEEEEEESCEEEEETT--E---EEEECTTEEEEECTTCCEEEECSSSEEEEEEEEES
T ss_pred CCCEEEEEEeCCEEEEEec--c---cEEeccCCEEEECCccEEEEeeCCCceEEEEEccC
Confidence 4499999999999887765 3 39999999999999999999987643333444443
No 129
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=95.60 E-value=0.048 Score=44.42 Aligned_cols=58 Identities=17% Similarity=0.368 Sum_probs=45.4
Q ss_pred hccceecC----cceEEEEecceE---EEEEEeCC---CcEEEEEEeC--CcEEEeCCCCeeeeecCCCC
Q psy840 80 FYTEHLHT----DEEIRLVLDGSG---YFDVRDKF---DDWIRIEVTK--GDLIIIPAGIYHRFTLDINN 137 (178)
Q Consensus 80 f~~eH~H~----~dEi~~il~G~g---~f~v~~~~---d~~~ri~~~~--GDli~vPaG~~H~f~~~~~~ 137 (178)
.=..|.|. ..++..+++|++ .+++|... ++|..+.+.+ +-.|.||+|..|-|..-+++
T Consensus 82 lRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~ 151 (205)
T 3ryk_A 82 IRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH 151 (205)
T ss_dssp EEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS
T ss_pred EeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC
Confidence 34678774 689999999997 45555432 6798888875 78899999999999877665
No 130
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=95.56 E-value=0.044 Score=43.77 Aligned_cols=57 Identities=18% Similarity=0.373 Sum_probs=43.8
Q ss_pred ccceec----CcceEEEEecceEE---EEEEeCC---CcEEEEEEeC--CcEEEeCCCCeeeeecCCCC
Q psy840 81 YTEHLH----TDEEIRLVLDGSGY---FDVRDKF---DDWIRIEVTK--GDLIIIPAGIYHRFTLDINN 137 (178)
Q Consensus 81 ~~eH~H----~~dEi~~il~G~g~---f~v~~~~---d~~~ri~~~~--GDli~vPaG~~H~f~~~~~~ 137 (178)
-..|.| ...++..++.|++. ++++... ++|..+.+.+ +-.|.||+|..|-|..-+++
T Consensus 60 RGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (183)
T 1dzr_A 60 RGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY 128 (183)
T ss_dssp EEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred eeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 467887 45899999999986 4444311 4698888876 57899999999999877765
No 131
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=95.56 E-value=0.068 Score=43.20 Aligned_cols=71 Identities=14% Similarity=0.031 Sum_probs=54.6
Q ss_pred hhccceecCcceEEEEecceEEEEEEe--CCCcEE----EEEEeCCcEEEeCC--CCeeeeecC-CCCcEEEEEEeecCC
Q psy840 79 SFYTEHLHTDEEIRLVLDGSGYFDVRD--KFDDWI----RIEVTKGDLIIIPA--GIYHRFTLD-INNYVKAKRYFIGEP 149 (178)
Q Consensus 79 ~f~~eH~H~~dEi~~il~G~g~f~v~~--~~d~~~----ri~~~~GDli~vPa--G~~H~f~~~-~~~~~~alrlF~~~~ 149 (178)
+....|-|....+.+|++|+..-.+-. .++..+ +..+.+|+.+.+++ |--|+.... ++...+.|.+|..+-
T Consensus 90 q~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~~~avsLHvY~~~~ 169 (208)
T 2gm6_A 90 QRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDDRVSISIHVYGANI 169 (208)
T ss_dssp CBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESSCG
T ss_pred cccCcccCCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCCCcEEEEEEEcCCC
Confidence 457899999999999999999765522 222222 37899999999999 999999854 556688888887643
No 132
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=95.28 E-value=0.021 Score=46.77 Aligned_cols=60 Identities=17% Similarity=0.066 Sum_probs=45.4
Q ss_pred eeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCc
Q psy840 59 YEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNY 138 (178)
Q Consensus 59 ~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~ 138 (178)
..-++.+.++ .-+..|.|..+|+ +||+|+.. +.+ -.+.+|+.|.+|+|..|.+.++++..
T Consensus 147 ~v~l~r~~~G----------~~~~~~~hgG~Ei-lVL~G~~~----d~~-----~~~~~GsWlR~P~gs~h~~~ag~~g~ 206 (223)
T 3o14_A 147 TVTHRKLEPG----------ANLTSEAAGGIEV-LVLDGDVT----VND-----EVLGRNAWLRLPEGEALSATAGARGA 206 (223)
T ss_dssp EEEEEEECTT----------CEEEECCSSCEEE-EEEEEEEE----ETT-----EEECTTEEEEECTTCCEEEEEEEEEE
T ss_pred EEEEEEECCC----------CccCCCCCCcEEE-EEEEeEEE----ECC-----ceECCCeEEEeCCCCccCcEECCCCe
Confidence 4456666654 3368899966897 99999943 323 58999999999999999998865543
No 133
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=95.03 E-value=0.041 Score=47.06 Aligned_cols=52 Identities=15% Similarity=0.177 Sum_probs=42.0
Q ss_pred ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeec
Q psy840 89 EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIG 147 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~ 147 (178)
|-..++++|+....+.+. ...+++||.|.||||+.|.+...++ .++|.+-..
T Consensus 227 d~wiWqLEGss~Vt~~~q-----~~~L~~~DsLLIpa~~~y~~~r~~g--sv~L~I~~~ 278 (286)
T 2qnk_A 227 DVWLWQLEGSSVVTMGGR-----RLSLAPDDSLLVLAGTSYAWERTQG--SVALSVTQD 278 (286)
T ss_dssp CEEEEEEESCEEEEETTE-----EEEECTTEEEEECTTCCEEEEECTT--CEEEEEEEC
T ss_pred cEEEEEEcCceEEEECCe-----EEeccCCCEEEecCCCeEEEEecCC--eEEEEEEEC
Confidence 677899999998777543 3899999999999999999998876 355555444
No 134
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=94.66 E-value=0.073 Score=41.65 Aligned_cols=52 Identities=13% Similarity=0.300 Sum_probs=40.1
Q ss_pred eecCcceEEEEecceEEEEEEeCC----------------------------------CcEEEEEEeCCcEEEeCCCCee
Q psy840 84 HLHTDEEIRLVLDGSGYFDVRDKF----------------------------------DDWIRIEVTKGDLIIIPAGIYH 129 (178)
Q Consensus 84 H~H~~dEi~~il~G~g~f~v~~~~----------------------------------d~~~ri~~~~GDli~vPaG~~H 129 (178)
|.-..+-+...+.|+=.+.+-..+ -..+.+.++|||+|.||+|-.|
T Consensus 140 H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~LyiP~gW~H 219 (235)
T 4gjz_A 140 HQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWH 219 (235)
T ss_dssp ECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEECTTCEEEECTTCEE
T ss_pred eeccccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEECCCCEEEeCCCCcE
Confidence 444457778889999999885321 1356899999999999999999
Q ss_pred eeecCC
Q psy840 130 RFTLDI 135 (178)
Q Consensus 130 ~f~~~~ 135 (178)
.....+
T Consensus 220 ~V~~l~ 225 (235)
T 4gjz_A 220 YVRALD 225 (235)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 987654
No 135
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=94.63 E-value=0.12 Score=42.46 Aligned_cols=58 Identities=16% Similarity=0.257 Sum_probs=44.6
Q ss_pred ccceecC----cceEEEEecceEE---EEEEeC---CCcEEEEEEeCC--cEEEeCCCCeeeeecCCCCc
Q psy840 81 YTEHLHT----DEEIRLVLDGSGY---FDVRDK---FDDWIRIEVTKG--DLIIIPAGIYHRFTLDINNY 138 (178)
Q Consensus 81 ~~eH~H~----~dEi~~il~G~g~---f~v~~~---~d~~~ri~~~~G--Dli~vPaG~~H~f~~~~~~~ 138 (178)
-..|.|. ..++..+++|++. ++++.. -++|..+.+.+. -.|.||+|..|-|..-+++.
T Consensus 68 RGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a 137 (216)
T 2c0z_A 68 RGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDEA 137 (216)
T ss_dssp EEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEE
T ss_pred EcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCCe
Confidence 4678775 5899999999986 455432 146988888875 68999999999998777653
No 136
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=94.53 E-value=0.13 Score=41.70 Aligned_cols=58 Identities=17% Similarity=0.333 Sum_probs=43.7
Q ss_pred ccceecC----cceEEEEecceEE---EEEEeC---CCcEEEEEEeC--CcEEEeCCCCeeeeecCCCCc
Q psy840 81 YTEHLHT----DEEIRLVLDGSGY---FDVRDK---FDDWIRIEVTK--GDLIIIPAGIYHRFTLDINNY 138 (178)
Q Consensus 81 ~~eH~H~----~dEi~~il~G~g~---f~v~~~---~d~~~ri~~~~--GDli~vPaG~~H~f~~~~~~~ 138 (178)
-..|.|. ..++..++.|++. ++++.. =|+|..+.+.+ +-.|.||+|..|-|..-+++.
T Consensus 60 RGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~a 129 (205)
T 1oi6_A 60 RGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDDT 129 (205)
T ss_dssp EEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTTE
T ss_pred eeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCCe
Confidence 4678775 5899999999985 344321 14698888876 478999999999998777653
No 137
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=94.33 E-value=0.18 Score=42.13 Aligned_cols=63 Identities=8% Similarity=0.279 Sum_probs=47.3
Q ss_pred ccceecCc-ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCC--Ceeeeec-CCCCcEEEEEEeec
Q psy840 81 YTEHLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAG--IYHRFTL-DINNYVKAKRYFIG 147 (178)
Q Consensus 81 ~~eH~H~~-dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG--~~H~f~~-~~~~~~~alrlF~~ 147 (178)
|..|.|.+ |.|.|+++|++.+. |.-|. .-.+++||+-..-|| +.|.=.. .++..+..+.|...
T Consensus 77 f~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQlWi~ 143 (256)
T 2vec_A 77 FQPRTYPKVDILNVILDGEAEYR--DSEGN--HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLD 143 (256)
T ss_dssp EEEECCSSEEEEEEEEESEEEEE--ETTSC--EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEEEE
T ss_pred cCCcCCCCcEEEEEEEeeEEEEE--eCCCC--EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEEEEEe
Confidence 78999999 55899999997764 32233 378999999998665 7998544 44467888888755
No 138
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=94.26 E-value=0.22 Score=40.18 Aligned_cols=58 Identities=24% Similarity=0.384 Sum_probs=43.8
Q ss_pred hccceecC----cceEEEEecceEEE---EEEeC---CCcEEEEEEeC--CcEEEeCCCCeeeeecCCCC
Q psy840 80 FYTEHLHT----DEEIRLVLDGSGYF---DVRDK---FDDWIRIEVTK--GDLIIIPAGIYHRFTLDINN 137 (178)
Q Consensus 80 f~~eH~H~----~dEi~~il~G~g~f---~v~~~---~d~~~ri~~~~--GDli~vPaG~~H~f~~~~~~ 137 (178)
.-..|.|. ..++..++.|++.. +++.. -++|..+.+.+ +-.|.||+|..|-|..-+++
T Consensus 77 lRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~ 146 (196)
T 1wlt_A 77 VRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS 146 (196)
T ss_dssp EEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE
T ss_pred ceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 34678775 58999999999854 33321 14698888885 68899999999999877764
No 139
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=93.77 E-value=0.25 Score=40.77 Aligned_cols=58 Identities=21% Similarity=0.377 Sum_probs=44.0
Q ss_pred ccceecC----cceEEEEecceEE---EEEEeC---CCcEEEEEEeCC--cEEEeCCCCeeeeecCCCCc
Q psy840 81 YTEHLHT----DEEIRLVLDGSGY---FDVRDK---FDDWIRIEVTKG--DLIIIPAGIYHRFTLDINNY 138 (178)
Q Consensus 81 ~~eH~H~----~dEi~~il~G~g~---f~v~~~---~d~~~ri~~~~G--Dli~vPaG~~H~f~~~~~~~ 138 (178)
-..|.|. ..++..++.|+++ ++++.. -++|..+.+.+. -.|.||+|..|-|..-+++.
T Consensus 79 RGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a 148 (225)
T 1upi_A 79 RGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNS 148 (225)
T ss_dssp EEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSSE
T ss_pred eeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCCE
Confidence 4678775 5899999999986 344321 146988888874 78999999999998777653
No 140
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=93.47 E-value=0.38 Score=41.37 Aligned_cols=66 Identities=12% Similarity=0.095 Sum_probs=49.4
Q ss_pred cceecCcceEEEEecceEEEEEEeCC-----------------------------------CcEEEEEEeCCcEEEeCCC
Q psy840 82 TEHLHTDEEIRLVLDGSGYFDVRDKF-----------------------------------DDWIRIEVTKGDLIIIPAG 126 (178)
Q Consensus 82 ~eH~H~~dEi~~il~G~g~f~v~~~~-----------------------------------d~~~ri~~~~GDli~vPaG 126 (178)
..|....+-+...+.|+=.+.+-... ...+.+.++|||+|.||+|
T Consensus 197 ~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~LyiP~g 276 (349)
T 3d8c_A 197 PAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMY 276 (349)
T ss_dssp EEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEECTTCEEEECTT
T ss_pred cceECChhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEECCCCEEEECCC
Confidence 45665667778888999888764311 1468999999999999999
Q ss_pred CeeeeecCC-CCcEEEEEEeec
Q psy840 127 IYHRFTLDI-NNYVKAKRYFIG 147 (178)
Q Consensus 127 ~~H~f~~~~-~~~~~alrlF~~ 147 (178)
-.|.....+ +..-.++.++..
T Consensus 277 WwH~V~~l~d~~~sisvn~w~~ 298 (349)
T 3d8c_A 277 WWHHIESLLNGGITITVNFWYK 298 (349)
T ss_dssp CEEEEEECTTSCCEEEEEEEEE
T ss_pred CcEEEEEcCCCCcEEEEEEEcC
Confidence 999998765 344567777554
No 141
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=93.37 E-value=0.82 Score=41.67 Aligned_cols=66 Identities=18% Similarity=0.226 Sum_probs=47.7
Q ss_pred ccceecCcceEEEEecceEEEEEEeCCC--------------------cEEEEEEeCCcEEEeCCCCeeeeecCCCCcEE
Q psy840 81 YTEHLHTDEEIRLVLDGSGYFDVRDKFD--------------------DWIRIEVTKGDLIIIPAGIYHRFTLDINNYVK 140 (178)
Q Consensus 81 ~~eH~H~~dEi~~il~G~g~f~v~~~~d--------------------~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~ 140 (178)
+..|.=+.+-+..-+.|+=.+.+....+ ..+.+.++|||++.||+|..|..+..++..-.
T Consensus 178 ~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~Sl 257 (489)
T 4diq_A 178 FAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSL 257 (489)
T ss_dssp SCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEE
T ss_pred ccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCceEEEecCCCceE
Confidence 4566666677777788888888865321 23579999999999999999999887654444
Q ss_pred EEEEee
Q psy840 141 AKRYFI 146 (178)
Q Consensus 141 alrlF~ 146 (178)
.+.+-.
T Consensus 258 hlTi~~ 263 (489)
T 4diq_A 258 HLTLST 263 (489)
T ss_dssp EEEEEE
T ss_pred EEeecc
Confidence 444443
No 142
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=93.30 E-value=0.41 Score=42.85 Aligned_cols=55 Identities=20% Similarity=0.259 Sum_probs=43.7
Q ss_pred ccceecCcceEEEEecceEEEEEEeCCC----------------cEEEEEEeCCcEEEeCCCCeeeeecCC
Q psy840 81 YTEHLHTDEEIRLVLDGSGYFDVRDKFD----------------DWIRIEVTKGDLIIIPAGIYHRFTLDI 135 (178)
Q Consensus 81 ~~eH~H~~dEi~~il~G~g~f~v~~~~d----------------~~~ri~~~~GDli~vPaG~~H~f~~~~ 135 (178)
+..|.-..+-+...+.|+=.+.+-..+. ..+.+.++|||++.||+|..|.....+
T Consensus 153 ~~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 153 LPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp SCSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEECCS
T ss_pred ccceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEecC
Confidence 4678866677888889999988865421 135789999999999999999997764
No 143
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=93.00 E-value=0.5 Score=38.93 Aligned_cols=63 Identities=24% Similarity=0.390 Sum_probs=46.5
Q ss_pred ccceecCc-ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeC--CCCeeeeec-CCCCcEEEEEEeec
Q psy840 81 YTEHLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIP--AGIYHRFTL-DINNYVKAKRYFIG 147 (178)
Q Consensus 81 ~~eH~H~~-dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vP--aG~~H~f~~-~~~~~~~alrlF~~ 147 (178)
|..|.|.+ |.|.|+++|++... |--|. .-.+++||+-..- .|+.|.=.. .++..+..+.|...
T Consensus 54 f~~HPHrg~EtvTyvl~G~~~H~--DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQlWv~ 120 (242)
T 1tq5_A 54 FGTHPHKDMEILTYVLEGTVEHQ--DSMGN--KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWIM 120 (242)
T ss_dssp EEEEEECSCEEEEEEEESEEEEE--ESSSC--EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEEEEC
T ss_pred CCCcCCCCcEEEEEEEEeEEEEE--eCCCC--cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEEEEc
Confidence 68999999 66999999997654 32233 3789999998884 458998543 44466888888753
No 144
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=92.90 E-value=0.43 Score=41.06 Aligned_cols=55 Identities=16% Similarity=0.416 Sum_probs=43.9
Q ss_pred ccceecCcceEEEEecceEEEEEE-eCC---------------------------------CcEEEEEEeCCcEEEeCCC
Q psy840 81 YTEHLHTDEEIRLVLDGSGYFDVR-DKF---------------------------------DDWIRIEVTKGDLIIIPAG 126 (178)
Q Consensus 81 ~~eH~H~~dEi~~il~G~g~f~v~-~~~---------------------------------d~~~ri~~~~GDli~vPaG 126 (178)
...|.-..+-+...+.|+=.+.+- ..+ ...+.+.++|||+|.||+|
T Consensus 154 ~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~pGD~LyiP~g 233 (342)
T 1vrb_A 154 FKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRG 233 (342)
T ss_dssp CCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEECTTCEEEECTT
T ss_pred CCCeECChhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEECCCcEEEeCCC
Confidence 567887778788888999988887 311 1236789999999999999
Q ss_pred CeeeeecCC
Q psy840 127 IYHRFTLDI 135 (178)
Q Consensus 127 ~~H~f~~~~ 135 (178)
..|.....+
T Consensus 234 wwH~v~s~~ 242 (342)
T 1vrb_A 234 LWHSTKSDQ 242 (342)
T ss_dssp CEEEEECSS
T ss_pred ccEEEEECC
Confidence 999998764
No 145
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=92.63 E-value=0.46 Score=38.55 Aligned_cols=59 Identities=15% Similarity=0.256 Sum_probs=43.5
Q ss_pred hccceecC----cceEEEEecceEEEEE---EeC---CCcEEEEEEeC--CcEEEeCCCCeeeeecCCCCc
Q psy840 80 FYTEHLHT----DEEIRLVLDGSGYFDV---RDK---FDDWIRIEVTK--GDLIIIPAGIYHRFTLDINNY 138 (178)
Q Consensus 80 f~~eH~H~----~dEi~~il~G~g~f~v---~~~---~d~~~ri~~~~--GDli~vPaG~~H~f~~~~~~~ 138 (178)
.-..|.|. ...+..++.|+.+--+ |.. =++|..+.+.+ +-.|.||+|..|-|.+-+++.
T Consensus 56 lRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a 126 (201)
T 4hn1_A 56 LRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDDA 126 (201)
T ss_dssp EEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTTE
T ss_pred eEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCCe
Confidence 34577774 6899999999974322 221 15788888876 788999999999998766653
No 146
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=91.79 E-value=0.18 Score=42.67 Aligned_cols=51 Identities=22% Similarity=0.365 Sum_probs=37.3
Q ss_pred hccceecCcc---------eEEEE-e---cceEEEEEEe---CCCcEEEEEEeCCcEEEeCCCCeeeeec
Q psy840 80 FYTEHLHTDE---------EIRLV-L---DGSGYFDVRD---KFDDWIRIEVTKGDLIIIPAGIYHRFTL 133 (178)
Q Consensus 80 f~~eH~H~~d---------Ei~~i-l---~G~g~f~v~~---~~d~~~ri~~~~GDli~vPaG~~H~f~~ 133 (178)
-++.|+|+.+ |++|+ + .|.|.-.+-. +.|. .+.++.||.++||.|- |-..+
T Consensus 167 SyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de--~~~V~~~d~VlvP~Gy-Hp~~a 233 (270)
T 2qjv_A 167 SWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDE--CMAVYNRDVVXVPXGY-HPVAT 233 (270)
T ss_dssp SCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEE--EEEEETTCEEEESSSB-CCEEE
T ss_pred cCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCce--EEEEECCCEEecCCCc-CCCcC
Confidence 3889999975 99987 4 3666555511 1223 3899999999999999 98543
No 147
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=91.36 E-value=3 Score=33.23 Aligned_cols=72 Identities=14% Similarity=-0.072 Sum_probs=54.2
Q ss_pred hhccceecCc-ceEEEEecceEEEEEEeC-CC------cEEEEEEeCCcEEEe-CCCCeeeeecCC-CCcEEEEEEeecC
Q psy840 79 SFYTEHLHTD-EEIRLVLDGSGYFDVRDK-FD------DWIRIEVTKGDLIII-PAGIYHRFTLDI-NNYVKAKRYFIGE 148 (178)
Q Consensus 79 ~f~~eH~H~~-dEi~~il~G~g~f~v~~~-~d------~~~ri~~~~GDli~v-PaG~~H~f~~~~-~~~~~alrlF~~~ 148 (178)
+.-..|-|.. -.+.+|++|+..-.+-.. ++ ..-...+.+||...+ |++--|+..... +.....|.+|.++
T Consensus 81 q~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~~~avSlHvY~pp 160 (200)
T 3eln_A 81 HGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHTEPAVSLHLYSPP 160 (200)
T ss_dssp CBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSSCCEEEEEEEESC
T ss_pred CcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCCCCEEEEEeCCCC
Confidence 3568999996 899999999998765321 11 012478999999999 877799998765 5678888888876
Q ss_pred Cc
Q psy840 149 PV 150 (178)
Q Consensus 149 ~g 150 (178)
-+
T Consensus 161 ~~ 162 (200)
T 3eln_A 161 FD 162 (200)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 148
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=90.72 E-value=1.2 Score=37.95 Aligned_cols=65 Identities=14% Similarity=0.174 Sum_probs=46.5
Q ss_pred ceecCcceEEEEecceEEEEEEeCC------------------------------CcEEEEEEeCCcEEEeCCCCeeeee
Q psy840 83 EHLHTDEEIRLVLDGSGYFDVRDKF------------------------------DDWIRIEVTKGDLIIIPAGIYHRFT 132 (178)
Q Consensus 83 eH~H~~dEi~~il~G~g~f~v~~~~------------------------------d~~~ri~~~~GDli~vPaG~~H~f~ 132 (178)
.|.-..+-+...+.|+=.+.+-... -..+.+.++|||+|.||+|-.|...
T Consensus 182 ~H~D~~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~LyiP~gWwH~v~ 261 (338)
T 3al5_A 182 THYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIPALWFHNVI 261 (338)
T ss_dssp EECCSSEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCEEEECTTCEEEEE
T ss_pred ceECCcccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCEEEECCCCeEEEe
Confidence 4555556677778999888765321 1268999999999999999999998
Q ss_pred cCCCCcEEEEEE-eecCC
Q psy840 133 LDINNYVKAKRY-FIGEP 149 (178)
Q Consensus 133 ~~~~~~~~alrl-F~~~~ 149 (178)
..+. -.++-+ |...+
T Consensus 262 ~l~~--sisvn~~~~~~~ 277 (338)
T 3al5_A 262 SEEF--GVGVNIFWKHLP 277 (338)
T ss_dssp ESSC--EEEEEEEECSSC
T ss_pred eCCC--EEEEEEEecCCc
Confidence 7643 356664 44443
No 149
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=89.92 E-value=4 Score=30.44 Aligned_cols=71 Identities=14% Similarity=0.209 Sum_probs=48.2
Q ss_pred hhhccceecCc--ceEEEEecceEEEEEEeCCCc---EEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCC
Q psy840 78 KSFYTEHLHTD--EEIRLVLDGSGYFDVRDKFDD---WIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEP 149 (178)
Q Consensus 78 ~~f~~eH~H~~--dEi~~il~G~g~f~v~~~~d~---~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~ 149 (178)
+.|...|.=.. -...-|++|+..|..-.+++. --.+.+.+|+.-+|||...|+..++++-.+ -|.||..++
T Consensus 26 ~~l~~~HnTK~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~f-~leFyc~~~ 101 (119)
T 3dl3_A 26 EALLTHHNTAVDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQF-NINFWSDQD 101 (119)
T ss_dssp HHHHSSBCCCTTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCEE-EEEEEECC-
T ss_pred HHHHhccCCCCcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeEE-EEEEEECch
Confidence 45555553322 355679999999986432221 134788999999999999999996655433 467777665
No 150
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=89.70 E-value=0.26 Score=34.04 Aligned_cols=28 Identities=11% Similarity=0.208 Sum_probs=24.3
Q ss_pred hccceecCc-ceEEEEecceEEEEEEeCC
Q psy840 80 FYTEHLHTD-EEIRLVLDGSGYFDVRDKF 107 (178)
Q Consensus 80 f~~eH~H~~-dEi~~il~G~g~f~v~~~~ 107 (178)
.+..|+|+. -||.||++|++++.+.+..
T Consensus 48 ~~~PH~hprA~ei~~V~~G~~~v~~V~~~ 76 (79)
T 1dgw_X 48 LFVPHYNSRATVILVANEGRAEVELVGLE 76 (79)
T ss_dssp EEEEEEESSCEEEEEEEESCEEEEEEEEC
T ss_pred CcCCccCCCCcEEEEEEeceEEEEEecCC
Confidence 578999997 7999999999999886644
No 151
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=88.07 E-value=1.2 Score=31.97 Aligned_cols=46 Identities=13% Similarity=0.193 Sum_probs=38.8
Q ss_pred cceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCC
Q psy840 88 DEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDIN 136 (178)
Q Consensus 88 ~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~ 136 (178)
..|+.=|++|++.+.+.+. +.| ....+|+-..||+|..-.....+.
T Consensus 41 ~~E~M~vvsG~~~V~lpg~-~ew--~~~~aGesF~Vpans~F~l~v~~~ 86 (94)
T 2oyz_A 41 APERMTVVKGALVVKRVGE-ADW--TTYSSGESFDVEGNSSFELQVKDA 86 (94)
T ss_dssp SCEEEEEEESEEEEEETTC-SSC--EEEETTCEEEECSSEEEEEEESSC
T ss_pred CeEEEEEEEeEEEEEcCCC-CcC--EEECCCCEEEECCCCEEEEEEccc
Confidence 3788899999999999763 467 789999999999999887776654
No 152
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=87.48 E-value=4.7 Score=32.54 Aligned_cols=71 Identities=13% Similarity=0.033 Sum_probs=53.9
Q ss_pred hhccceecCcceEEEEecceEEEEE--EeCCCcEE----EEEEeCCcEEEeCCC--CeeeeecC-CCCcEEEEEEeecCC
Q psy840 79 SFYTEHLHTDEEIRLVLDGSGYFDV--RDKFDDWI----RIEVTKGDLIIIPAG--IYHRFTLD-INNYVKAKRYFIGEP 149 (178)
Q Consensus 79 ~f~~eH~H~~dEi~~il~G~g~f~v--~~~~d~~~----ri~~~~GDli~vPaG--~~H~f~~~-~~~~~~alrlF~~~~ 149 (178)
+.-+.|-|...-+..|++|+..-.+ ...++... +..+.+||.+.++++ --|+.... ++.....|.+|..+-
T Consensus 84 q~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d~~avSLHvYg~pl 163 (211)
T 3uss_A 84 QITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGANI 163 (211)
T ss_dssp CBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESSCG
T ss_pred CcCCCCCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCCCCEEEEEEcCCCC
Confidence 4568999998999999999987654 22233321 278999999999988 78998844 456688999998865
No 153
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=85.82 E-value=0.37 Score=40.87 Aligned_cols=45 Identities=29% Similarity=0.358 Sum_probs=32.6
Q ss_pred ceEEEEec-ceEEEEEEeC-----------CCc------EEEEEEeCCcEEEeCCCCeeeeec
Q psy840 89 EEIRLVLD-GSGYFDVRDK-----------FDD------WIRIEVTKGDLIIIPAGIYHRFTL 133 (178)
Q Consensus 89 dEi~~il~-G~g~f~v~~~-----------~d~------~~ri~~~~GDli~vPaG~~H~f~~ 133 (178)
.|+.|+|+ .++++.++.. ++. --++.++|||.+.||||+.|-.-.
T Consensus 118 pE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~~ 180 (300)
T 1zx5_A 118 ESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGEG 180 (300)
T ss_dssp CEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEES
T ss_pred cEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcCC
Confidence 78888887 4455554421 122 457899999999999999998653
No 154
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=85.44 E-value=1.1 Score=38.55 Aligned_cols=27 Identities=19% Similarity=0.274 Sum_probs=24.1
Q ss_pred EEEEEEeCCcEEEeCCCCeeeeecCCC
Q psy840 110 WIRIEVTKGDLIIIPAGIYHRFTLDIN 136 (178)
Q Consensus 110 ~~ri~~~~GDli~vPaG~~H~f~~~~~ 136 (178)
.+++.++|||+|.||+|-.|.....++
T Consensus 255 ~~~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 255 PLEILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSC
T ss_pred eEEEEECCCCEEEeCCCCcEEEecCCC
Confidence 368999999999999999999987775
No 155
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=84.62 E-value=0.45 Score=40.58 Aligned_cols=23 Identities=30% Similarity=0.647 Sum_probs=20.1
Q ss_pred EEEEEeCCcEEEeCCCCeeeeec
Q psy840 111 IRIEVTKGDLIIIPAGIYHRFTL 133 (178)
Q Consensus 111 ~ri~~~~GDli~vPaG~~H~f~~ 133 (178)
-++.++|||.+.||||+.|..-.
T Consensus 158 n~v~l~pGd~~~ipaGt~HA~~~ 180 (319)
T 1qwr_A 158 RRIKIKPGDFYYVPSGTLHALCK 180 (319)
T ss_dssp EEEECCTTCEEEECTTCCEEECS
T ss_pred eEEEcCCCCEEEcCCCCceEecC
Confidence 35999999999999999998643
No 156
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=84.28 E-value=3.4 Score=34.54 Aligned_cols=63 Identities=19% Similarity=0.295 Sum_probs=45.9
Q ss_pred ccceecCc-ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCC--CCeeeeecCCCCcEEEEEEeec
Q psy840 81 YTEHLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPA--GIYHRFTLDINNYVKAKRYFIG 147 (178)
Q Consensus 81 ~~eH~H~~-dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPa--G~~H~f~~~~~~~~~alrlF~~ 147 (178)
|..|-|.+ |=|.|+++|+.... |--|. .-.+++||+=..-| |+.|.=...++..+..+.|...
T Consensus 52 f~~HPHrg~EtVTyvl~G~~~H~--DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWvn 117 (277)
T 2p17_A 52 FDVHPHRGIETVTYVISGELEHF--DSKAG--HSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQLWVN 117 (277)
T ss_dssp CCCEEECSEEEEEEEEESCEEEE--ETTTE--EEEECTTCEEEEECTTCEEEEEEECTTCCEEEEEEEEE
T ss_pred CCCCCCCCcEEEEEEEEeEEEEe--eCCCC--ceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEEEEee
Confidence 89999999 55899999997653 32333 36899999965555 5789855445566888888764
No 157
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=83.83 E-value=1.7 Score=34.86 Aligned_cols=56 Identities=14% Similarity=0.266 Sum_probs=38.4
Q ss_pred hhhccceecCcce---EEEEec--ceEEEEEEeCC------------------CcEEEEEEeCCcEEEeCCCCeeeeec
Q psy840 78 KSFYTEHLHTDEE---IRLVLD--GSGYFDVRDKF------------------DDWIRIEVTKGDLIIIPAGIYHRFTL 133 (178)
Q Consensus 78 ~~f~~eH~H~~dE---i~~il~--G~g~f~v~~~~------------------d~~~ri~~~~GDli~vPaG~~H~f~~ 133 (178)
+.|+..|.|+.-- |+|+-. +.|.+.+.+.. ..++.+..++||+|+-|+.+.|....
T Consensus 113 G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~l~H~V~p 191 (216)
T 2rg4_A 113 GGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESWLRHEVPM 191 (216)
T ss_dssp TCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETTSCEEECC
T ss_pred CCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCCCEEeccC
Confidence 4689999998754 345532 22333333321 24457899999999999999999876
No 158
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=83.34 E-value=4.2 Score=34.54 Aligned_cols=56 Identities=14% Similarity=0.078 Sum_probs=37.8
Q ss_pred hccceecCc--ceEEEEe---cceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCC
Q psy840 80 FYTEHLHTD--EEIRLVL---DGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINN 137 (178)
Q Consensus 80 f~~eH~H~~--dEi~~il---~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~ 137 (178)
-++.|+|+. ||.+|+- .|.+.-.+ ++.++-.-+.++.||.+++|.+-.|..- +-++
T Consensus 195 SyPpHkHDrr~EeyyYF~l~~~gfv~q~~-g~p~Etrhi~V~n~daVlvP~wh~h~~~-G~~~ 255 (282)
T 1xru_A 195 TMPCHTHERRMEVYFYFNMDDDACVFHMM-GQPQETRHIVMHNEQAVISPSWSIHSGV-GTKA 255 (282)
T ss_dssp SCSEEECTTEEEEEEEESCCTTCCEEEEE-EETTEEEEEEECSSEEEEECTTCEEEEE-ESSC
T ss_pred CCCCccCCCCceEEEEEEeCCCCEEEEEe-CCCCCeeEEEEECCCEEEeCCCCCCCCC-Cccc
Confidence 389999986 7777774 34444444 4355555578999999999975566633 4433
No 159
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=81.65 E-value=0.8 Score=40.32 Aligned_cols=22 Identities=14% Similarity=0.306 Sum_probs=19.7
Q ss_pred EEEEeCCcEEEeCCCCeeeeec
Q psy840 112 RIEVTKGDLIIIPAGIYHRFTL 133 (178)
Q Consensus 112 ri~~~~GDli~vPaG~~H~f~~ 133 (178)
++.++|||.+.||||+.|-.-.
T Consensus 241 ~v~l~pGd~~fipAG~~HAy~~ 262 (394)
T 2wfp_A 241 VVKLNPGEAMFLFAETPHAYLQ 262 (394)
T ss_dssp EEEECTTCEEEECTTCCEEEEE
T ss_pred EEECCCCCEEEcCCCCceEcCC
Confidence 5899999999999999998643
No 160
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=80.56 E-value=3.6 Score=35.08 Aligned_cols=51 Identities=18% Similarity=0.096 Sum_probs=27.2
Q ss_pred hccceecCc--ceEEEEe---cceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeee
Q psy840 80 FYTEHLHTD--EEIRLVL---DGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRF 131 (178)
Q Consensus 80 f~~eH~H~~--dEi~~il---~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f 131 (178)
-++.|+|+. |+.+|+- +|.++-.+ ++-|.-+-+.++.||.+++|+|-+|-.
T Consensus 195 SyPpHkHDrr~E~yyYF~l~p~~~v~h~~-g~pdEtrh~~V~n~daVlvP~wgyHp~ 250 (289)
T 1ywk_A 195 TMPCHTHERRMEAYVYFDMEEDTRIFHMM-GKPDETKHLVMSNEQAAISPSWSIHSG 250 (289)
T ss_dssp C--------CEEEEEEESCCTTCCEEEEE-SSTTSCEEEEECTTEEEEECTTSCCCE
T ss_pred CCCCccCCCCCeeEEEEEeCCCCeEEEEC-CCCCceEEEEEECCCEEEeCCCcccCC
Confidence 378999986 4444442 13333333 334554557899999999999988963
No 161
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=80.55 E-value=5 Score=29.65 Aligned_cols=50 Identities=14% Similarity=0.198 Sum_probs=40.8
Q ss_pred eecCc-ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCC
Q psy840 84 HLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDIN 136 (178)
Q Consensus 84 H~H~~-dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~ 136 (178)
+.-.. .|+.=|++|++...+.+. +.| ....+|+-..||++..-.....+.
T Consensus 52 tF~T~~~E~MevvsG~l~V~Lpg~-~eW--~~~~aGesF~VpanssF~lkv~~~ 102 (111)
T 3hqx_A 52 TFETHVPERMEIISGECRVKIADS-TES--ELFRAGQSFYVPGNSLFKIETDEV 102 (111)
T ss_dssp EEECSSCEEEEEEESEEEEEETTC-SSC--EEEETTCEEEECTTCEEEEECSSC
T ss_pred EEcCCCcEEEEEEEeEEEEEcCCc-ccC--EEeCCCCEEEECCCCcEEEEECcc
Confidence 33343 688899999999988773 467 789999999999999988887764
No 162
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=80.31 E-value=4.5 Score=28.76 Aligned_cols=36 Identities=14% Similarity=0.277 Sum_probs=27.6
Q ss_pred EEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecC
Q psy840 111 IRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGE 148 (178)
Q Consensus 111 ~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~ 148 (178)
++-.+++||+++||+|-.=-..++.+ +..+-+.++.
T Consensus 6 ~~~~l~~G~v~vVPq~~~v~~~A~~~--le~v~F~tna 41 (93)
T 1dgw_Y 6 YAATLSEGDIIVIPSSFPVALKAASD--LNMVGIGVNA 41 (93)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESSS--EEEEEEEESC
T ss_pred hhceecCCcEEEECCCCceeEEecCC--eEEEEEEecC
Confidence 45689999999999998877777753 6666665655
No 163
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=80.07 E-value=2.2 Score=31.36 Aligned_cols=49 Identities=29% Similarity=0.451 Sum_probs=39.0
Q ss_pred eecCc-ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCC
Q psy840 84 HLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDI 135 (178)
Q Consensus 84 H~H~~-dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~ 135 (178)
+.-.. .|+.-|++|++.+.+.+. +.| ....+|+-..||++..-.....+
T Consensus 49 ~F~T~~~E~MevvsG~l~V~LpG~-~eW--~~~~aGesF~VpanssF~lkv~~ 98 (106)
T 3eo6_A 49 TLSSEVAETIRVLSGMAYYHAEGA-NDV--QELHAGDSMVIPANQSYRLEVME 98 (106)
T ss_dssp EECCSSCEEEEEEEEEEEEECTTC-SSC--EEEETTCEEEECSSSCEEEEEEE
T ss_pred EecCCCcEEEEEEEeEEEEECCCC-ccC--EEECCCCEEEECCCCcEEEEECc
Confidence 33344 788999999999888763 467 78999999999999987776554
No 164
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=78.65 E-value=2.5 Score=36.73 Aligned_cols=27 Identities=30% Similarity=0.289 Sum_probs=22.5
Q ss_pred cEEEEEEeCCcEEEeCCCCeeeeecCC
Q psy840 109 DWIRIEVTKGDLIIIPAGIYHRFTLDI 135 (178)
Q Consensus 109 ~~~ri~~~~GDli~vPaG~~H~f~~~~ 135 (178)
.++++.=+|||+|++++|++||.-..+
T Consensus 277 Pvyr~~QkpGd~Vi~~PgayH~v~n~G 303 (332)
T 2xxz_A 277 PVYRFVQRPGDLVWINAGTVHWVQATG 303 (332)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEESS
T ss_pred CeEEEEECCCCEEEECCCceEEEEecc
Confidence 356888899999999999999965444
No 165
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=78.58 E-value=2.9 Score=37.59 Aligned_cols=54 Identities=22% Similarity=0.351 Sum_probs=38.5
Q ss_pred ceecCcce--EEEEecceEEEEEEeC-------------------------CCcEEEEEEeCCcEEEeCCCCeeeeecCC
Q psy840 83 EHLHTDEE--IRLVLDGSGYFDVRDK-------------------------FDDWIRIEVTKGDLIIIPAGIYHRFTLDI 135 (178)
Q Consensus 83 eH~H~~dE--i~~il~G~g~f~v~~~-------------------------~d~~~ri~~~~GDli~vPaG~~H~f~~~~ 135 (178)
.|.-...- -..++.|+=.|.+-.. .++++++.+++||+|.||+|-.|.....+
T Consensus 246 ~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGWwH~V~nle 325 (447)
T 3kv4_A 246 FHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWIHAVLTPV 325 (447)
T ss_dssp EECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTCEEEEEESS
T ss_pred eeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCCeEEEecCC
Confidence 34444433 3467888888876421 23568999999999999999999976665
Q ss_pred C
Q psy840 136 N 136 (178)
Q Consensus 136 ~ 136 (178)
+
T Consensus 326 d 326 (447)
T 3kv4_A 326 D 326 (447)
T ss_dssp C
T ss_pred C
Confidence 4
No 166
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=77.82 E-value=2 Score=36.60 Aligned_cols=36 Identities=33% Similarity=0.458 Sum_probs=29.1
Q ss_pred cceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCe
Q psy840 88 DEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIY 128 (178)
Q Consensus 88 ~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~ 128 (178)
.-.|..+++|+|.+.. ++. .+.+++||.++|||++.
T Consensus 269 ~~~il~v~~G~~~l~~---~~~--~~~l~~G~~~~vpa~~~ 304 (319)
T 1qwr_A 269 SFLICSVIEGSGLLKY---EDK--TCPLKKGDHFILPAQMP 304 (319)
T ss_dssp SCEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCC
T ss_pred ccEEEEEEcCeEEEEE---CCE--EEEEcCCcEEEEeCCCc
Confidence 4678999999998765 232 37899999999999873
No 167
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=77.66 E-value=8.4 Score=31.12 Aligned_cols=94 Identities=14% Similarity=0.108 Sum_probs=58.7
Q ss_pred hcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeC----Cc--EEEeCCCC
Q psy840 54 DRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTK----GD--LIIIPAGI 127 (178)
Q Consensus 54 ~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~----GD--li~vPaG~ 127 (178)
.|...+.-.+-|.++. .+-.+|.-..|||.+...|.....+-..++..-++.+.+ |. .++||+|+
T Consensus 75 ~R~~~TaIYfLL~~~~---------~~S~wHRv~sdEiW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~ 145 (203)
T 1xe7_A 75 TRNQSTLIYYLLTPDS---------PIGKFHKNINRIIHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGV 145 (203)
T ss_dssp EEESCEEEEEEEBTTB---------CEEEEEEESSCEEEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTC
T ss_pred CccceeEEEEEEcCCC---------CcccceeeCCCEEEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCE
Confidence 3555555555555541 134677777799999999977665655667766677765 44 38999999
Q ss_pred eeeeecCC-CCcE-EEEEEeecCCceeecCC
Q psy840 128 YHRFTLDI-NNYV-KAKRYFIGEPVWTPHNR 156 (178)
Q Consensus 128 ~H~f~~~~-~~~~-~alrlF~~~~gW~~~~r 156 (178)
.....+.. +.+- -+|-=++=.||+..-.+
T Consensus 146 WqaA~~~~~~~~~~~tLVgCtVaPGFdF~dF 176 (203)
T 1xe7_A 146 FKASFLLPNEEFDNGFLISEVVVPGFDFEDH 176 (203)
T ss_dssp EEEEEECCCTTTTTCEEEEEEESSCCCGGGE
T ss_pred EEEeEecCCCCcccceEEEEEecCCccchhc
Confidence 88876542 2220 02333444677775443
No 168
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=76.88 E-value=4 Score=34.45 Aligned_cols=51 Identities=18% Similarity=0.310 Sum_probs=34.6
Q ss_pred cc-eEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEee
Q psy840 88 DE-EIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFI 146 (178)
Q Consensus 88 ~d-Ei~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~ 146 (178)
.- .|..+++| |..... +. .+.+++||.++|||++.- +++.++ .+++++.|.
T Consensus 247 ~~~~il~v~~G-~~i~~~---~~--~~~l~~G~~~~ipa~~~~-~~i~g~-~~~~~~a~~ 298 (300)
T 1zx5_A 247 GVMNILYAAEG-YFILRG---KE--TADLHRGYSCLVPASTDS-FTVESE-RGKIVRIYL 298 (300)
T ss_dssp SBCEEEEEEES-CEEEES---SS--EEEECTTCEEEECTTCCE-EEEEEE-EEEEEEEEE
T ss_pred CceEEEEEccc-EEEEeC---Ce--EEEEccceEEEEeCCCce-EEEEeC-ceEEEEEEE
Confidence 35 78899999 987662 22 268999999999999843 222221 356666553
No 169
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=76.78 E-value=2.2 Score=37.55 Aligned_cols=54 Identities=22% Similarity=0.351 Sum_probs=38.2
Q ss_pred ceecCcce--EEEEecceEEEEEEeC-------------------------CCcEEEEEEeCCcEEEeCCCCeeeeecCC
Q psy840 83 EHLHTDEE--IRLVLDGSGYFDVRDK-------------------------FDDWIRIEVTKGDLIIIPAGIYHRFTLDI 135 (178)
Q Consensus 83 eH~H~~dE--i~~il~G~g~f~v~~~-------------------------~d~~~ri~~~~GDli~vPaG~~H~f~~~~ 135 (178)
.|.....- -..++.|+=.|.+-.. .++++++.+++||+|.||+|-.|.....+
T Consensus 162 ~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGWwH~V~nle 241 (371)
T 3k3o_A 162 FHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWIHAVLTPV 241 (371)
T ss_dssp EECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTCEEEEEEEE
T ss_pred eEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCCeEEEecCC
Confidence 35554433 2467888877776421 13568999999999999999999976554
Q ss_pred C
Q psy840 136 N 136 (178)
Q Consensus 136 ~ 136 (178)
+
T Consensus 242 d 242 (371)
T 3k3o_A 242 D 242 (371)
T ss_dssp E
T ss_pred C
Confidence 3
No 170
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=76.57 E-value=2.2 Score=37.82 Aligned_cols=28 Identities=18% Similarity=0.317 Sum_probs=24.1
Q ss_pred cEEEEEEeCCcEEEeCCCCeeeeecCCC
Q psy840 109 DWIRIEVTKGDLIIIPAGIYHRFTLDIN 136 (178)
Q Consensus 109 ~~~ri~~~~GDli~vPaG~~H~f~~~~~ 136 (178)
+++++.+++||+|.||+|-.|.....++
T Consensus 242 ~~~ev~l~pGEtlfIPsGWwH~V~nled 269 (392)
T 3pua_A 242 KCYKCIVKQGQTLFIPSGWIYATLTPVD 269 (392)
T ss_dssp CCEEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred ceEEEEECCCcEEeeCCCceEEEecCCC
Confidence 5689999999999999999999765543
No 171
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=76.57 E-value=3.3 Score=37.26 Aligned_cols=28 Identities=32% Similarity=0.526 Sum_probs=24.5
Q ss_pred cEEEEEEeCCcEEEeCCCCeeeeecCCC
Q psy840 109 DWIRIEVTKGDLIIIPAGIYHRFTLDIN 136 (178)
Q Consensus 109 ~~~ri~~~~GDli~vPaG~~H~f~~~~~ 136 (178)
..+++.+++||+|.||+|=.|.....++
T Consensus 264 ~~~~v~l~pGE~LfIPsGWwH~V~nled 291 (451)
T 2yu1_A 264 DCQRIELKQGYTFVIPSGWIHAVYTPTD 291 (451)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEECSSC
T ss_pred cceEEEECCCcEEEeCCCceEEEecCCC
Confidence 4688999999999999999999876654
No 172
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=76.44 E-value=8.1 Score=32.48 Aligned_cols=63 Identities=21% Similarity=0.313 Sum_probs=45.4
Q ss_pred ccceecCc-ceEEEEe-cceEEEEEEeCCCcEEEEEEeCCcEEEeC--CCCeeeeecCCCCcEEEEEEeec
Q psy840 81 YTEHLHTD-EEIRLVL-DGSGYFDVRDKFDDWIRIEVTKGDLIIIP--AGIYHRFTLDINNYVKAKRYFIG 147 (178)
Q Consensus 81 ~~eH~H~~-dEi~~il-~G~g~f~v~~~~d~~~ri~~~~GDli~vP--aG~~H~f~~~~~~~~~alrlF~~ 147 (178)
|..|-|.+ |=|.|++ +|+.... |--|. .-.+++||+-..= .|+.|.=...++..+..+.|...
T Consensus 53 f~~HPHrg~EtVTyvl~~G~~~H~--DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWvn 119 (290)
T 1j1l_A 53 FPDHPHRGFETVSYLLEGGSMAHE--DFCGH--TGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQLWVN 119 (290)
T ss_dssp EEEEEEBSEEEEEEECSSSCEEEE--ETTSC--EEEECTTCEEEEECTTCEEEEEEECSSSCEEEEEEEEE
T ss_pred CCCCCCCCeEEEEEECcceEEEEe--eCCCC--ceEECCCcEEEEeCCCCEEEEeEcCCCCCEEEEEEEec
Confidence 79999999 5589999 9997763 32233 3689999985554 45788754445566888888763
No 173
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=74.92 E-value=1.7 Score=38.92 Aligned_cols=23 Identities=17% Similarity=0.362 Sum_probs=20.0
Q ss_pred EEEEeCCcEEEeCCCCeeeeecC
Q psy840 112 RIEVTKGDLIIIPAGIYHRFTLD 134 (178)
Q Consensus 112 ri~~~~GDli~vPaG~~H~f~~~ 134 (178)
.|.++|||.|.||||+.|-.--+
T Consensus 267 ~v~L~pGea~flpAg~~HAYl~G 289 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYISG 289 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEEEE
T ss_pred eEecCCCCEEecCCCCccccCCC
Confidence 48999999999999999986543
No 174
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=74.72 E-value=12 Score=29.35 Aligned_cols=88 Identities=7% Similarity=0.082 Sum_probs=57.3
Q ss_pred hccceecCcceEEEEecceE-EEEEEeCCCcEEEEEEe----CCc---EEEeCCCCeeeeecCCCCcEEEEEEeecCCce
Q psy840 80 FYTEHLHTDEEIRLVLDGSG-YFDVRDKFDDWIRIEVT----KGD---LIIIPAGIYHRFTLDINNYVKAKRYFIGEPVW 151 (178)
Q Consensus 80 f~~eH~H~~dEi~~il~G~g-~f~v~~~~d~~~ri~~~----~GD---li~vPaG~~H~f~~~~~~~~~alrlF~~~~gW 151 (178)
+-.+|.-..+|+.+...|.. .+.+-..++...++.+. +|+ .++||+|+.....+ ..+ ++-=++=.||+
T Consensus 65 ~S~~HRv~sdEiW~~~~G~pL~l~~~~~dG~~~~~~LG~d~~~Ge~~pQ~vVP~G~WqaA~~--~~~--~LVsctVaPGF 140 (172)
T 3loi_A 65 PDPFHRVKSDETFVHNLGGSMKIHMIHPDGSYSCSILGNPLEHPEARHQVVVPRRVWFAQEV--DGY--CLASVLVAPGF 140 (172)
T ss_dssp CEEEEECSSEEEEEEEEESCEEEEEECTTSCEEEEEESCTTTSTTCBSEEEECTTCEEEEEE--SSE--EEEEEEEESCC
T ss_pred CccCEEecCCEEEEEEcCCCEEEEEEcCCCceEEEEeCCCcccCCcceEEEECCCEEEEEEe--CCc--EEEEEEEcCCc
Confidence 45677777799999999976 56666667777777775 467 58999999777776 333 23333345776
Q ss_pred eecCCC---CCchHHHHHHHHHH
Q psy840 152 TPHNRP---ADDMECRLEYLKKI 171 (178)
Q Consensus 152 ~~~~r~---~d~~~~r~~yl~~~ 171 (178)
..-.+. .+.+..++|-.+.|
T Consensus 141 ~f~dfel~~~~~L~~~~P~~~~~ 163 (172)
T 3loi_A 141 DFKDFSLGKREELIKEYPQHRDV 163 (172)
T ss_dssp CGGGCEECCHHHHHHHCGGGHHH
T ss_pred cchhcEEcCHHHHHHHCchHHHH
Confidence 654433 24445555544433
No 175
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=73.93 E-value=2.7 Score=38.69 Aligned_cols=29 Identities=24% Similarity=0.493 Sum_probs=24.3
Q ss_pred CcEEEEEEeCCcEEEeCCCCeeeeecCCC
Q psy840 108 DDWIRIEVTKGDLIIIPAGIYHRFTLDIN 136 (178)
Q Consensus 108 d~~~ri~~~~GDli~vPaG~~H~f~~~~~ 136 (178)
+.++++.++|||+|.||+|-.|.....++
T Consensus 363 ~~~~~v~l~pGEtlfIPsGW~HaV~tleD 391 (528)
T 3pur_A 363 GAVKRVVIKEGQTLLIPAGWIHAVLTPVD 391 (528)
T ss_dssp TCCEEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred ccEEEEEECCCCEEEecCCceEEEecCCC
Confidence 35788999999999999999999755543
No 176
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=72.27 E-value=3.2 Score=37.62 Aligned_cols=55 Identities=20% Similarity=0.271 Sum_probs=40.2
Q ss_pred cceecCcce--EEEEecceEEEEEEeC-------------------------CCcEEEEEEeCCcEEEeCCCCeeeeecC
Q psy840 82 TEHLHTDEE--IRLVLDGSGYFDVRDK-------------------------FDDWIRIEVTKGDLIIIPAGIYHRFTLD 134 (178)
Q Consensus 82 ~eH~H~~dE--i~~il~G~g~f~v~~~-------------------------~d~~~ri~~~~GDli~vPaG~~H~f~~~ 134 (178)
..|.....- ...++.|+=.|.+-.. .++++++.+++||+|.||+|-.|.....
T Consensus 280 ~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWwH~V~nl 359 (488)
T 3kv5_D 280 DFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWIHAVLTS 359 (488)
T ss_dssp EEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCEEEEEEE
T ss_pred CeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCceEEeeCC
Confidence 345555544 3478888888877532 1356899999999999999999997655
Q ss_pred CC
Q psy840 135 IN 136 (178)
Q Consensus 135 ~~ 136 (178)
++
T Consensus 360 ed 361 (488)
T 3kv5_D 360 QD 361 (488)
T ss_dssp EE
T ss_pred CC
Confidence 43
No 177
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=71.05 E-value=3 Score=35.55 Aligned_cols=37 Identities=24% Similarity=0.366 Sum_probs=27.4
Q ss_pred ceecCc-ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCee
Q psy840 83 EHLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYH 129 (178)
Q Consensus 83 eH~H~~-dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H 129 (178)
.=.|.. -| +|||.|+..+ |. -.|.+|..+.+|+|+.=
T Consensus 106 ~Gi~~ad~E-~fVL~G~i~~------G~---~~l~~h~Y~f~PaGV~~ 143 (303)
T 2qdr_A 106 SGIFTADLE-IFVIKGAIQL------GE---WQLNKHSYSFIPAGVRI 143 (303)
T ss_dssp CBEESSCEE-EEEEESEEEE------TT---EEECTTEEEEECTTCCB
T ss_pred CcccccceE-EEEEEeEEEe------CC---EEecCCceEEecCCCcc
Confidence 444444 55 9999998653 22 58999999999999853
No 178
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=70.83 E-value=3.7 Score=36.40 Aligned_cols=55 Identities=20% Similarity=0.271 Sum_probs=38.9
Q ss_pred cceecCcce--EEEEecceEEEEEEeC-------------------------CCcEEEEEEeCCcEEEeCCCCeeeeecC
Q psy840 82 TEHLHTDEE--IRLVLDGSGYFDVRDK-------------------------FDDWIRIEVTKGDLIIIPAGIYHRFTLD 134 (178)
Q Consensus 82 ~eH~H~~dE--i~~il~G~g~f~v~~~-------------------------~d~~~ri~~~~GDli~vPaG~~H~f~~~ 134 (178)
..|.....- -..++.|+=.|.+-.. .++++++.+++||.+.||+|-.|....-
T Consensus 189 ~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIPsGW~H~V~nl 268 (397)
T 3kv9_A 189 DFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWIHAVLTS 268 (397)
T ss_dssp EEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEECTTCEEEEEEE
T ss_pred CEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeCCCCeEEccCC
Confidence 345555533 3467777777766432 1357899999999999999999997655
Q ss_pred CC
Q psy840 135 IN 136 (178)
Q Consensus 135 ~~ 136 (178)
++
T Consensus 269 ed 270 (397)
T 3kv9_A 269 QD 270 (397)
T ss_dssp EE
T ss_pred cC
Confidence 43
No 179
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=70.62 E-value=4.8 Score=35.70 Aligned_cols=39 Identities=21% Similarity=0.238 Sum_probs=29.2
Q ss_pred EEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCC
Q psy840 111 IRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEP 149 (178)
Q Consensus 111 ~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~ 149 (178)
+.+.-++||.|+||||-+|-...-.+.--+|+.+++.+.
T Consensus 293 ~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~ 331 (392)
T 2ypd_A 293 CTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEH 331 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGGG
T ss_pred EEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChhh
Confidence 468889999999999999998877643233556666553
No 180
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=69.87 E-value=3 Score=36.60 Aligned_cols=53 Identities=13% Similarity=0.180 Sum_probs=36.1
Q ss_pred ecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEe
Q psy840 85 LHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYF 145 (178)
Q Consensus 85 ~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF 145 (178)
.+..-.|..+++|+|..... +. .+.+++||.++|||+..- +++.+ ..+++|.|
T Consensus 339 ~~~~~~il~v~~G~~~l~~~---~~--~~~l~~G~~~fvpa~~~~-~~i~g--~~~~~~~~ 391 (394)
T 2wfp_A 339 GQHSAAILFCVEGEAVLRKD---EQ--RLVLKPGESAFIGADESP-VNASG--TGRLARVY 391 (394)
T ss_dssp CCSSCEEEEEEEEEEEEEET---TE--EEEECTTCEEEECGGGCC-EEEEE--EEEEEEEE
T ss_pred cCCCcEEEEEEeceEEEEEC---Ce--EEEEccCcEEEEeCCCce-EEEEe--eeEEEEEE
Confidence 33446899999999986553 22 378999999999998532 33322 25566655
No 181
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=69.66 E-value=5.2 Score=36.79 Aligned_cols=42 Identities=21% Similarity=0.139 Sum_probs=28.4
Q ss_pred EEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCCceee
Q psy840 110 WIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEPVWTP 153 (178)
Q Consensus 110 ~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~gW~~ 153 (178)
++++.=+|||+|++++|++||.-..+- -..+-.=.+.+-|.+
T Consensus 337 vyr~vQkpGd~Vi~~PgayH~v~n~G~--~~n~awN~a~~~~~q 378 (531)
T 3avr_A 337 VYRFIQRPGDLVWINAGTVHWVQAIGW--CNNIAWNVGPLTACQ 378 (531)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSS--EEEEEEEECCSSHHH
T ss_pred eEEEEECCCCEEEECCCceEEEEecce--eeeeEEEeccCchHH
Confidence 467888999999999999999765543 233333334444554
No 182
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=69.43 E-value=12 Score=25.81 Aligned_cols=57 Identities=14% Similarity=-0.097 Sum_probs=35.9
Q ss_pred ceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEEEeC---CCCeeeeecCCCCcEEEEEEe
Q psy840 89 EEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLIIIP---AGIYHRFTLDINNYVKAKRYF 145 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli~vP---aG~~H~f~~~~~~~~~alrlF 145 (178)
+.+++|++|.......+.+|+ .+--.+.+||++-.. .+.++.+++........+++-
T Consensus 47 ~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~~~~i~ 107 (149)
T 2pqq_A 47 DRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIGELSLFDPGPRTATGTALTEVKLLALG 107 (149)
T ss_dssp CEEEEEEESCEEEEEECTTSSEEEEEEECTTCEESGGGGTSCEECSSEEEESSCEEEEEEE
T ss_pred CeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEechHHhcCCCCcceEEEEccceEEEEEe
Confidence 678999999999887765554 344578899987322 233444444333335555553
No 183
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=68.78 E-value=10 Score=33.74 Aligned_cols=58 Identities=16% Similarity=0.292 Sum_probs=37.4
Q ss_pred CcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCC---CCcEEEEEEee
Q psy840 87 TDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDI---NNYVKAKRYFI 146 (178)
Q Consensus 87 ~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~---~~~~~alrlF~ 146 (178)
....|..+++|+|.+...+.. .- ...+++||.++||++..=.++... ...+.+.|-|.
T Consensus 378 ~~~~illv~~G~g~i~~~~~~-~~-~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~~~~~~a~~ 438 (440)
T 1pmi_A 378 NGPSIVIATNGKGTIQITGDD-ST-KQKIDTGYVFFVAPGSSIELTADSANQDQDFTTYRAFV 438 (440)
T ss_dssp SSCEEEEEEESEEEEEETTCG-GG-CEEEETTCEEEECTTCCEEEEECSSCCSSCCEEEEEEC
T ss_pred CCcEEEEEEeCeEEEEeCCcc-cc-eEEeccCCEEEEeCCCcEEEEEecccCCCcEEEEEEEe
Confidence 447799999999998764310 10 048999999999999543344331 23355555553
No 184
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=67.97 E-value=6.7 Score=33.42 Aligned_cols=30 Identities=20% Similarity=0.222 Sum_probs=25.0
Q ss_pred ecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeee
Q psy840 85 LHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHR 130 (178)
Q Consensus 85 ~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~ 130 (178)
+|+..|=.|+++|.+ ..|+..+-|+|+.|-
T Consensus 235 iHdy~EEvY~LeG~~----------------d~G~Y~~RPpg~~HG 264 (303)
T 2qdr_A 235 IQPYNEEGYCLTGYC----------------DVGDYRIVKDHYWYC 264 (303)
T ss_dssp EECSCEEEEEEEEEE----------------EETTEEEETTEEEEE
T ss_pred eeccceeEEEEeeec----------------cCceeeEcCCCCccC
Confidence 588877778898865 239999999999998
No 185
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=66.90 E-value=6.5 Score=36.01 Aligned_cols=27 Identities=30% Similarity=0.289 Sum_probs=22.4
Q ss_pred cEEEEEEeCCcEEEeCCCCeeeeecCC
Q psy840 109 DWIRIEVTKGDLIIIPAGIYHRFTLDI 135 (178)
Q Consensus 109 ~~~ri~~~~GDli~vPaG~~H~f~~~~ 135 (178)
.++++.=+|||+|++++|++||.-..+
T Consensus 311 Pvyr~iQkPGdfVit~PgtyH~Vqs~G 337 (510)
T 4ask_A 311 PVYRFVQRPGDLVWINAGTVHWVQATG 337 (510)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEESS
T ss_pred CeEEEEECCCCEEEECCCceEEEEecC
Confidence 345788899999999999999976554
No 186
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=63.05 E-value=14 Score=27.06 Aligned_cols=86 Identities=9% Similarity=-0.124 Sum_probs=49.8
Q ss_pred ChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEEE
Q psy840 44 QDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLII 122 (178)
Q Consensus 44 ~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli~ 122 (178)
.+++++.|...- .+.++.++. ..+.+- -+.+.+++|++|.......+.+|+ .+--.+.+||++-
T Consensus 19 ~~~~~~~l~~~~-----~~~~~~~g~---------~l~~~G-~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 19 TDEDAGTLSAFF-----QLKKVRKKE---------TLLKTG-EICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLS 83 (194)
T ss_dssp CHHHHHHHHTTC-----EEEEECTTC---------EEECTT-SBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEC
T ss_pred CHHHHHHHHHhC-----EEEEEcCCC---------EEECCC-CeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEe
Confidence 566677776432 455555542 122211 123779999999999887766664 4445789999985
Q ss_pred -eC---CCCeeeeecCCCCcEEEEEE
Q psy840 123 -IP---AGIYHRFTLDINNYVKAKRY 144 (178)
Q Consensus 123 -vP---aG~~H~f~~~~~~~~~alrl 144 (178)
+. .+.++.+++..-....++++
T Consensus 84 e~~~~~~~~~~~~~~~a~~~~~v~~i 109 (194)
T 3dn7_A 84 DYMAFQKQQPADFYIQSVENCELLSI 109 (194)
T ss_dssp CHHHHHHTCBCSSEEEESSCEEEEEE
T ss_pred ehHHHhcCCCCceEEEEECCEEEEEE
Confidence 32 24444444433333555554
No 187
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=63.02 E-value=12 Score=25.71 Aligned_cols=86 Identities=13% Similarity=0.106 Sum_probs=45.6
Q ss_pred ChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCc-EE---EEEEeCCc
Q psy840 44 QDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDD-WI---RIEVTKGD 119 (178)
Q Consensus 44 ~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~-~~---ri~~~~GD 119 (178)
.++.++.|... ..+..+.++. ..+.+.. +.+.+++|++|.........+|+ .+ --.+.+||
T Consensus 18 ~~~~~~~l~~~-----~~~~~~~~g~---------~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~ 82 (142)
T 3mdp_A 18 TDEQLKDIALI-----SEEKSFPTGS---------VIFKENS-KADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGA 82 (142)
T ss_dssp CHHHHHHHHHT-----EEEEEECTTC---------EEECTTS-BCCEEEEEEESCEEEECC---------CEEEEECTTC
T ss_pred CHHHHHHHHHh-----hcEEecCCCC---------EEEeCCC-CCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCC
Confidence 56777777654 3555656542 1122111 13789999999998876655553 33 35689999
Q ss_pred EEEeC---CCCeeeeecCCCCcEEEEEE
Q psy840 120 LIIIP---AGIYHRFTLDINNYVKAKRY 144 (178)
Q Consensus 120 li~vP---aG~~H~f~~~~~~~~~alrl 144 (178)
++=.. .+.++.+++.......++++
T Consensus 83 ~fG~~~~~~~~~~~~~~~a~~~~~~~~i 110 (142)
T 3mdp_A 83 IFGVSSLIKPYHYTSSARATKPVRVVDI 110 (142)
T ss_dssp EECGGGSSTTCBCSSEEEESSCEEEEEE
T ss_pred EechHHHcCCCCceEEEEECCcEEEEEE
Confidence 87433 34444344333333444444
No 188
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=62.70 E-value=23 Score=31.26 Aligned_cols=50 Identities=12% Similarity=0.008 Sum_probs=40.0
Q ss_pred EEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEE
Q psy840 92 RLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRY 144 (178)
Q Consensus 92 ~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrl 144 (178)
+.|++|.........++. ....++|+|-.-|-+=++|.|+ ++..+..+|.
T Consensus 358 Y~v~~G~lTL~W~~~dGt-~~a~L~PDgSAwv~PFV~H~w~--G~GtVlkLgs 407 (443)
T 3g7d_A 358 YVVTEGRLTLEWDGPDGP-ASVELEPDGSAWTGPFVRHRWH--GTGTVLKFGS 407 (443)
T ss_dssp EEEEESCEEEEEEETTEE-EEEEECTTCEEEECTTCCEEEE--SSEEEEEEEE
T ss_pred EEEecCceEEEecCCCCc-cceEECCCCceeeccccccccc--CCceEEEecc
Confidence 568899999988875544 8899999999999999999999 3334555554
No 189
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=60.27 E-value=26 Score=26.00 Aligned_cols=86 Identities=8% Similarity=-0.039 Sum_probs=49.6
Q ss_pred ChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEEE
Q psy840 44 QDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLII 122 (178)
Q Consensus 44 ~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli~ 122 (178)
.+++++.|... ..+.++.++. ..+.+- -+.+.+++|++|.......+.+|+ .+--.+.+||++.
T Consensus 15 ~~~~~~~l~~~-----~~~~~~~~g~---------~i~~~G-~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~ 79 (220)
T 3dv8_A 15 NTAQKKLISDN-----LITQHVKKGT---------IIHNGN-MDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCL 79 (220)
T ss_dssp CHHHHHHHHTT-----CEEEEECTTC---------EEEEGG-GCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred CHHHHHHHHhh-----CceEEeCCCC---------EEECCC-CCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeee
Confidence 56677777643 2456666542 112211 123679999999999888776665 3445678999963
Q ss_pred e-----CCCCeeeeecCCCCcEEEEEE
Q psy840 123 I-----PAGIYHRFTLDINNYVKAKRY 144 (178)
Q Consensus 123 v-----PaG~~H~f~~~~~~~~~alrl 144 (178)
+ -.+.++.+++.......++++
T Consensus 80 ~g~~~~~~~~~~~~~~~a~~~~~~~~i 106 (220)
T 3dv8_A 80 LSASCIMRSIQFEVTIEAEKDTDLWII 106 (220)
T ss_dssp GGGGGGCTTCCCCCEEEESSCEEEEEE
T ss_pred hhHHHHhCCCCCceEEEEeeeeEEEEE
Confidence 2 233444444433333455554
No 190
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=59.10 E-value=22 Score=26.23 Aligned_cols=56 Identities=13% Similarity=-0.060 Sum_probs=35.0
Q ss_pred ceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEEEe--CCCCeeeeecCCCCcEEEEEE
Q psy840 89 EEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLIII--PAGIYHRFTLDINNYVKAKRY 144 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli~v--PaG~~H~f~~~~~~~~~alrl 144 (178)
+.+++|++|.......+.+|+ .+--.+.+||++=. =.+.++.+++.......++++
T Consensus 18 ~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge~~~~~~~~~~~~~A~~~~~v~~i 76 (195)
T 3b02_A 18 RTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGEEALEGKAYRYTAEAMTEAVVQGL 76 (195)
T ss_dssp CCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECGGGGTCSBCSSEEEESSSEEEEEE
T ss_pred CeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEechhhhCCCCceeEEEECCcEEEEEE
Confidence 678999999998877665654 44457899998743 123334444333333455554
No 191
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=58.75 E-value=33 Score=25.62 Aligned_cols=34 Identities=18% Similarity=0.111 Sum_probs=25.6
Q ss_pred ceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEEEe
Q psy840 89 EEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLIII 123 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli~v 123 (178)
+.+++|++|..... ...+|+ .+--.+.+||++-.
T Consensus 46 ~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~~G~ 80 (220)
T 2fmy_A 46 NLVFLVKSGRVRVY-LAYEDKEFTLAILEAGDIFCT 80 (220)
T ss_dssp CEEEEEEESEEEEE-EECSSCEEEEEEEETTCEEES
T ss_pred CeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEeCC
Confidence 67899999999885 444554 44567899999866
No 192
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=56.76 E-value=38 Score=23.99 Aligned_cols=34 Identities=6% Similarity=-0.188 Sum_probs=25.1
Q ss_pred cceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEEE
Q psy840 88 DEEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLII 122 (178)
Q Consensus 88 ~dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli~ 122 (178)
.+.+++|++|...... ..+|+ .+--.+.+||++=
T Consensus 79 ~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~~G~~fG 113 (161)
T 3idb_B 79 GDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSFG 113 (161)
T ss_dssp CCEEEEEEESEEEEEE-EETTEEEEEEEEESCCEEC
T ss_pred CcEEEEEEeCEEEEEE-cCCCCeEEEEEcCCCCEec
Confidence 3679999999999887 44554 3444689999763
No 193
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=56.42 E-value=37 Score=25.46 Aligned_cols=34 Identities=18% Similarity=0.150 Sum_probs=25.3
Q ss_pred cceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEEE
Q psy840 88 DEEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLII 122 (178)
Q Consensus 88 ~dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli~ 122 (178)
.+.+++|++|..... ...+|+ .+--.+.+||++-
T Consensus 41 ~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~fG 75 (222)
T 1ft9_A 41 ENGVFVVVDGRLRVY-LVGEEREISLFYLTSGDMFC 75 (222)
T ss_dssp CCCEEEEEESEEEEE-EEETTEEEEEEEEETTCEEE
T ss_pred CCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEec
Confidence 367899999999885 444554 4445789999987
No 194
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=55.28 E-value=31 Score=25.79 Aligned_cols=66 Identities=8% Similarity=0.091 Sum_probs=42.3
Q ss_pred eeChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCc-EEEEEEeCCcE
Q psy840 42 NVQDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDL 120 (178)
Q Consensus 42 ~~~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDl 120 (178)
.+.+++++.|... ..+.++.++. ..+.+-. +.+.+++|++|.......+++|+ .+--.+.+||+
T Consensus 21 ~l~~~~~~~l~~~-----~~~~~~~~g~---------~i~~~g~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~ 85 (230)
T 3iwz_A 21 TLDAGTIERFLAH-----SHRRRYPTRT---------DVFRPGD-PAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEF 85 (230)
T ss_dssp -CCHHHHHHHHTT-----SEEEEECTTC---------EEECTTS-BCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCE
T ss_pred cCCHHHHHHHHHh-----CeEEEeCCCC---------EEECCCC-CCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCE
Confidence 3377888888753 2456666542 1222111 23789999999999887766665 44456899999
Q ss_pred EE
Q psy840 121 II 122 (178)
Q Consensus 121 i~ 122 (178)
+-
T Consensus 86 ~G 87 (230)
T 3iwz_A 86 VG 87 (230)
T ss_dssp ES
T ss_pred EE
Confidence 74
No 195
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=54.74 E-value=43 Score=25.82 Aligned_cols=73 Identities=12% Similarity=0.031 Sum_probs=50.3
Q ss_pred HhcCCCeeeEEEEcCCCCCCHHHHhhhhccceec-CcceEEEEecce-EEEEEEeCCCcEEEEEEeC----CcE--EEeC
Q psy840 53 KDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLH-TDEEIRLVLDGS-GYFDVRDKFDDWIRIEVTK----GDL--IIIP 124 (178)
Q Consensus 53 ~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H-~~dEi~~il~G~-g~f~v~~~~d~~~ri~~~~----GDl--i~vP 124 (178)
..|...+.-.+-|.++ .+-.+|.- ..|||.+...|. ....+-..++..-++.+.+ |.. ++||
T Consensus 35 ~~R~~~TaIYfLL~~g----------~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~Ge~pQ~vVP 104 (154)
T 1znp_A 35 GERGHSTAIYYLLEKG----------VRSHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEGERPQVIVP 104 (154)
T ss_dssp TTTCSCEEEEEEEESS----------CCEEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTTEESEEEEC
T ss_pred CCCcceeEEEEEecCC----------CCCcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccCcccEEEEc
Confidence 4566666666666654 24578887 779999999998 4444555555555566653 553 8999
Q ss_pred CCCeeeeecCC
Q psy840 125 AGIYHRFTLDI 135 (178)
Q Consensus 125 aG~~H~f~~~~ 135 (178)
+|+.......+
T Consensus 105 ~G~WqaA~~~g 115 (154)
T 1znp_A 105 ANCWQSAESLG 115 (154)
T ss_dssp TTCEEEEEESS
T ss_pred CCEEEEeeECC
Confidence 99988876553
No 196
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=54.27 E-value=27 Score=25.70 Aligned_cols=34 Identities=21% Similarity=0.215 Sum_probs=26.6
Q ss_pred ceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEEE
Q psy840 89 EEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLII 122 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli~ 122 (178)
+.+++|++|.......+.+|+ .+--.+.+||++-
T Consensus 32 ~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 66 (207)
T 2oz6_A 32 ETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFG 66 (207)
T ss_dssp CEEEEEEESEEEEEEECTTSCEEEEEEEETTCEES
T ss_pred CeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcc
Confidence 679999999999887766554 4455789999874
No 197
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=52.12 E-value=32 Score=25.48 Aligned_cols=63 Identities=19% Similarity=0.196 Sum_probs=40.4
Q ss_pred ChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEE
Q psy840 44 QDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLI 121 (178)
Q Consensus 44 ~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli 121 (178)
.+++++.|+.. ....++.++. ..+.+- -+.+.+++|++|.........+|+ .+--.+.+||++
T Consensus 51 ~~~~l~~l~~~-----~~~~~~~~ge---------~i~~~G-~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 51 SNEEVRYLCSY-----MQCYAAPRDC---------QLLTEG-DPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp CHHHHHHHHTT-----CEEEEECTTC---------EEECTT-SCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred CHHHHHHHHHh-----cEEEEeCCCC---------EEEcCC-CCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 66777777532 3455555542 112211 123689999999999888776664 344578999986
No 198
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=51.97 E-value=31 Score=25.38 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=26.9
Q ss_pred ceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEEE
Q psy840 89 EEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLII 122 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli~ 122 (178)
+.+++|++|.......+.+|+ .+--.+.+||++-
T Consensus 38 ~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 72 (210)
T 3ryp_A 38 ETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 72 (210)
T ss_dssp CEEEEEEESEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred CeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 678999999999887766665 3445789999974
No 199
>2qfe_A Calpain-7; C2-like domain, hydrolase, nuclear protein, protease, thiol protease; 1.45A {Homo sapiens}
Probab=51.13 E-value=14 Score=27.88 Aligned_cols=33 Identities=18% Similarity=0.130 Sum_probs=25.1
Q ss_pred EEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCC
Q psy840 112 RIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEP 149 (178)
Q Consensus 112 ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~ 149 (178)
+..+.||.+++|| -.|..+.+..| .||+|+..+
T Consensus 109 ~~~L~pG~YvIVP----STf~P~~eg~F-~LrVfs~~~ 141 (148)
T 2qfe_A 109 LENIPSGIFNIIP----STFLPKQEGPF-FLDFNSIIP 141 (148)
T ss_dssp EEEECSEEEEEEE----EESSTTCCEEE-EEEEEESSC
T ss_pred EEEcCCCCEEEEe----ccCCCCCccce-EEEEEeCCC
Confidence 4788899999998 45676666555 689999865
No 200
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=50.83 E-value=32 Score=26.03 Aligned_cols=63 Identities=11% Similarity=0.126 Sum_probs=41.1
Q ss_pred ChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEE
Q psy840 44 QDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLI 121 (178)
Q Consensus 44 ~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli 121 (178)
.+++++.|... ..+.++.++. ..+.+- -+.+.+++|++|.......+.+|+ .+--.+.+||++
T Consensus 23 ~~~~~~~l~~~-----~~~~~~~~g~---------~i~~~G-~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 23 PEQHVDALLSQ-----AVWRSYDRGE---------TLFLQE-EKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESF 86 (237)
T ss_dssp CHHHHHHHHTT-----CEEEEECTTC---------EEECTT-SCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEE
T ss_pred CHHHHHHHHhh-----CEEEEECCCC---------EEEcCC-CccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 66778877654 2456666542 112211 123679999999999888766665 444578999987
No 201
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=50.59 E-value=46 Score=27.27 Aligned_cols=103 Identities=14% Similarity=0.062 Sum_probs=60.0
Q ss_pred CCCcCCHhhhhhhcCeeE-------Eee--ChHHH-HHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEE
Q psy840 23 PKEYLDLQTLNKLTGVEY-------FNV--QDEVL-TKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIR 92 (178)
Q Consensus 23 p~~~v~~~~L~~~lGv~~-------~~~--~~~~l-~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~ 92 (178)
|..+.|.++|-++||..- ... +...+ ......|...+.-.+-|.++. +-.+|.-..+|++
T Consensus 15 ~~~~~ta~~lI~~L~L~PHPEGG~yrEt~Rs~~~v~~~~~~~R~~~TaIYfLL~~g~----------~S~~HRv~sdEiW 84 (225)
T 3m3i_A 15 APPQNTAEFWIKRLQLVPHPEGGYYSEVVRSAHKVDNEEGNRRHAYTTIYFLCTPES----------PSHLHRLCSDETW 84 (225)
T ss_dssp ---CCCHHHHHHHTTCEECTTSSEEEEEEECSSEEECTTSCEEESCEEEEEEECSSS----------CEEEEECSSEEEE
T ss_pred CCCCCCHHHHHHHCCCccCCCCceEEEEEECCCcccCCCCCCcccceeEEEEecCCC----------CcccEEecCCEEE
Confidence 345567777656665543 222 11111 001234555566666666653 3467777779999
Q ss_pred EEecceE-EEEEEeCCC----------------------------cEEEEEEeC----Cc--EEEeCCCCeeeeecCC
Q psy840 93 LVLDGSG-YFDVRDKFD----------------------------DWIRIEVTK----GD--LIIIPAGIYHRFTLDI 135 (178)
Q Consensus 93 ~il~G~g-~f~v~~~~d----------------------------~~~ri~~~~----GD--li~vPaG~~H~f~~~~ 135 (178)
+...|.. .+.+-..++ ..-++.+.+ |. .++||+|+.....+.+
T Consensus 85 ~~h~G~pL~l~li~~dG~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~ 162 (225)
T 3m3i_A 85 MYHAGDPLQLHVILKDPQDEDRIAAQPPAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAA 162 (225)
T ss_dssp EEEEESCEEEEEEESSSTTTTC------------------CCSSCEEEEEEESSCGGGTCBSEEEECTTCEEEEECCS
T ss_pred EEECCCCEEEEEEcCCCcccccccccccccccccccccccccccCceEEEEeCCCccCCceeEEEeCCCEEEEEEECC
Confidence 9999996 455555455 445566644 65 4799999977776544
No 202
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=50.47 E-value=16 Score=29.16 Aligned_cols=40 Identities=15% Similarity=0.190 Sum_probs=32.4
Q ss_pred EEEecceEEEEEEeC--CCcEEEEEEeCCcEEEeCCCCeeee
Q psy840 92 RLVLDGSGYFDVRDK--FDDWIRIEVTKGDLIIIPAGIYHRF 131 (178)
Q Consensus 92 ~~il~G~g~f~v~~~--~d~~~ri~~~~GDli~vPaG~~H~f 131 (178)
..=+-++..|.++.. .+..+++.++.||+++.+.+.++|+
T Consensus 135 svSLG~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r~~~ 176 (211)
T 3i3q_A 135 SVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFY 176 (211)
T ss_dssp EEEEESCEEEEECCSSTTSCCEEEEECTTCEEEECGGGTTCC
T ss_pred EEECCCCeEEEEecccCCCceEEEECCCCCEEEECchHHceE
Confidence 444778999999864 3567889999999999999888765
No 203
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=50.20 E-value=29 Score=25.67 Aligned_cols=56 Identities=9% Similarity=-0.135 Sum_probs=35.4
Q ss_pred ceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEEEeC---CCCeeeeecCCCCcEEEEEE
Q psy840 89 EEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLIIIP---AGIYHRFTLDINNYVKAKRY 144 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli~vP---aG~~H~f~~~~~~~~~alrl 144 (178)
+.+++|++|.......+.+|+ .+--.+.+||++-.. .+.++.+++.......++++
T Consensus 41 ~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~v~~i 100 (216)
T 4ev0_A 41 QALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVAVEDTELLAL 100 (216)
T ss_dssp CEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEESSSEEEEEE
T ss_pred CEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEEcCCEEEEEE
Confidence 689999999999888766665 445678999987421 23333443333333455554
No 204
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=48.67 E-value=35 Score=25.61 Aligned_cols=57 Identities=9% Similarity=-0.053 Sum_probs=35.2
Q ss_pred ceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEEEeC---CCCeeeeecCCCCcEEEEEEe
Q psy840 89 EEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLIIIP---AGIYHRFTLDINNYVKAKRYF 145 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli~vP---aG~~H~f~~~~~~~~~alrlF 145 (178)
+.+++|++|.......+.+|+ .+--.+.+||++-.. .+.++.+++.......++++-
T Consensus 48 ~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v~~i~ 108 (227)
T 3d0s_A 48 DRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSMD 108 (227)
T ss_dssp CEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEESSCEEEEEEE
T ss_pred CEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEcccEEEEEEe
Confidence 678999999999887766665 344578999987321 233444433333335555543
No 205
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=48.28 E-value=22 Score=28.54 Aligned_cols=40 Identities=13% Similarity=0.225 Sum_probs=31.6
Q ss_pred cEEEEEEeCCcEEEeCCCCeeeeecC---CCCcEEEEEEeecC
Q psy840 109 DWIRIEVTKGDLIIIPAGIYHRFTLD---INNYVKAKRYFIGE 148 (178)
Q Consensus 109 ~~~ri~~~~GDli~vPaG~~H~f~~~---~~~~~~alrlF~~~ 148 (178)
.++.+.+++||+++.=..+.|+-... .......+++..+.
T Consensus 226 ~~v~~~~~aGd~~~f~~~~~H~s~~N~s~~~R~~~~~~~~~~~ 268 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLMEAS 268 (291)
T ss_dssp GCEEECBCTTCEEEEETTCEEEECCBCSSSCCCEEEEEEEECT
T ss_pred CeeecccCCCcEEEEcCCceecCCCCCCCCceEEEEEEEEcCC
Confidence 47889999999999999999997533 23457788888764
No 206
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=47.89 E-value=47 Score=24.88 Aligned_cols=64 Identities=11% Similarity=0.028 Sum_probs=40.2
Q ss_pred ChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEEE
Q psy840 44 QDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLII 122 (178)
Q Consensus 44 ~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli~ 122 (178)
.+++++.|... ..+.++.++. ..+.+- -+.+.+++|++|.........+|+ .+--.+.+||++-
T Consensus 18 ~~~~~~~l~~~-----~~~~~~~~g~---------~i~~~G-~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 18 PEDAMREALKV-----VTERNFQPDE---------LVVEQD-AEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVG 82 (231)
T ss_dssp CHHHHHHHHHT-----EEEEEECTTC---------BCCCTT-CTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEES
T ss_pred CHHHHHHHHHh-----cEEEEECCCC---------EEEeCC-CCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEe
Confidence 56777777654 3556666552 112211 123679999999998877665654 4456789999873
No 207
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=47.19 E-value=36 Score=25.99 Aligned_cols=36 Identities=17% Similarity=0.268 Sum_probs=25.4
Q ss_pred ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeC
Q psy840 89 EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIP 124 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vP 124 (178)
+.+++|++|.......+.+|+-..+..-+||++-..
T Consensus 37 ~~~y~I~~G~v~~~~~~~~G~e~~~~~~~G~~~Ge~ 72 (238)
T 2bgc_A 37 EYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMS 72 (238)
T ss_dssp CEEEEEEESEEEEEEECTTSCEEEEEEEESSEEEES
T ss_pred ceEEEEEecEEEEEEECCCCCEEEEEEcCCCEecch
Confidence 678999999999887766665322333389997544
No 208
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=46.99 E-value=27 Score=28.37 Aligned_cols=46 Identities=9% Similarity=0.099 Sum_probs=35.0
Q ss_pred CcEEEEEEeCCcEEEeCCCCeeeeecCC---CCcEEEEEEeecCCceee
Q psy840 108 DDWIRIEVTKGDLIIIPAGIYHRFTLDI---NNYVKAKRYFIGEPVWTP 153 (178)
Q Consensus 108 d~~~ri~~~~GDli~vPaG~~H~f~~~~---~~~~~alrlF~~~~gW~~ 153 (178)
..++.+.+++||+++.=..+.|+-.... ......+++......|.+
T Consensus 213 ~~~v~~~~~aGd~vlf~~~~~H~s~~N~s~~~R~~~~~~y~~~~~~y~~ 261 (308)
T 2a1x_A 213 KARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYID 261 (308)
T ss_dssp SCCEEECBCTTCEEEECTTCCEEECCBCSSSCEEEEEEEEEETTCEECC
T ss_pred CCeEEccCCCccEEEECCCccccCCCCCCCCceEEEEEEEECCCceEcc
Confidence 3578899999999999999999986432 244667788777665655
No 209
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=46.91 E-value=30 Score=25.93 Aligned_cols=33 Identities=15% Similarity=0.172 Sum_probs=25.5
Q ss_pred ceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEE
Q psy840 89 EEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLI 121 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli 121 (178)
+.+++|++|.........+|+ .+--.+.+||++
T Consensus 41 ~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 41 EDVLILLEGTLKTEHVSENGKTLEIDEIKPVQII 74 (213)
T ss_dssp CEEEEEEESCEEEEEECTTSCEEEEEEECSSEES
T ss_pred ceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEe
Confidence 568999999998877666665 344578999986
No 210
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=46.70 E-value=38 Score=26.41 Aligned_cols=64 Identities=16% Similarity=0.151 Sum_probs=39.6
Q ss_pred ChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEEE
Q psy840 44 QDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLII 122 (178)
Q Consensus 44 ~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli~ 122 (178)
.++.++.|... ..+.++.++. ..+.+-. +.+.+++|++|.......+.+|+ .+--.+.+||++-
T Consensus 58 ~~~~l~~l~~~-----~~~~~~~~ge---------~i~~~G~-~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~G 122 (260)
T 3kcc_A 58 TDPTLEWFLSH-----CHIHKYPSKS---------TLIHQGE-KAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 122 (260)
T ss_dssp -CHHHHHHHTT-----SEEEEECTTC---------EEECTTC-BCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred CHHHHHHHHhh-----CEEEEECCCC---------EEECCCC-cCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEe
Confidence 66777777643 2445555442 1122111 23679999999999887766665 4456789999974
No 211
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=44.65 E-value=37 Score=25.03 Aligned_cols=56 Identities=14% Similarity=0.091 Sum_probs=35.3
Q ss_pred ceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEEEeC--CCCeeeeecCCCCcEEEEEE
Q psy840 89 EEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLIIIP--AGIYHRFTLDINNYVKAKRY 144 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli~vP--aG~~H~f~~~~~~~~~alrl 144 (178)
+.+++|++|.........+|+ .+--.+.+||++-.+ .|.++.+++..-....++++
T Consensus 26 ~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~~~~~v~~i 84 (202)
T 2zcw_A 26 DRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAATDVRLEPL 84 (202)
T ss_dssp CCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEESSCEEEEEC
T ss_pred CeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEcccEEEEEE
Confidence 668999999999877665655 444578999987431 13333444333333566666
No 212
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=42.83 E-value=2.5 Score=30.55 Aligned_cols=30 Identities=33% Similarity=0.397 Sum_probs=23.3
Q ss_pred EEEecc--eEEEEEEeCCCcEEEEEEeCCcEEEeCC
Q psy840 92 RLVLDG--SGYFDVRDKFDDWIRIEVTKGDLIIIPA 125 (178)
Q Consensus 92 ~~il~G--~g~f~v~~~~d~~~ri~~~~GDli~vPa 125 (178)
.|++.| ||...+.+.. ...+++||+|+|=+
T Consensus 32 TYvI~GerSG~I~lNGAA----Arl~~~GD~vII~a 63 (97)
T 1uhe_A 32 TYVILGKKRGEICVNGAA----ARKVAIGDVVIILA 63 (97)
T ss_dssp EECEEECSTTCEEEEGGG----GGGCCTTCEEEEEE
T ss_pred EEEEeeccCCeEEEchHH----HccCCCCCEEEEEE
Confidence 578888 6888898755 25899999998743
No 213
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=42.63 E-value=43 Score=25.66 Aligned_cols=33 Identities=9% Similarity=0.121 Sum_probs=26.4
Q ss_pred ceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEE
Q psy840 89 EEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLI 121 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli 121 (178)
+.+++|++|.......+.+|+ .+--.+.+||++
T Consensus 62 ~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~ 95 (243)
T 3la7_A 62 ERVYFLLKGAVKLSRVYEAGEEITVALLRENSVF 95 (243)
T ss_dssp CEEEEEEESCEEEEEECTTCCEEEEEEECTTCEE
T ss_pred ceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEE
Confidence 678999999999887766665 455678999987
No 214
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=42.37 E-value=16 Score=25.36 Aligned_cols=63 Identities=10% Similarity=0.045 Sum_probs=36.2
Q ss_pred ChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEE
Q psy840 44 QDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLI 121 (178)
Q Consensus 44 ~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli 121 (178)
.++.++.|+.. ..+.++.++. ..+.+- -+.+.+++|++|.........+|+ .+--.+.+||++
T Consensus 24 ~~~~~~~l~~~-----~~~~~~~~g~---------~i~~~g-~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 24 SPVQLQELLAS-----SDLVNLDKGA---------YVFRQG-EPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp CHHHHHHHHHT-----CEEEEECTTC---------EEECTT-SBCCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred CHHHHHHHHhh-----CcEEEecCCC---------EEecCC-CccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 56667777654 2445555442 111111 123679999999998876554443 334578899987
No 215
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=42.22 E-value=41 Score=27.06 Aligned_cols=79 Identities=13% Similarity=0.057 Sum_probs=48.7
Q ss_pred cCCHhhhhhhcCeeEEeeChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEe
Q psy840 26 YLDLQTLNKLTGVEYFNVQDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRD 105 (178)
Q Consensus 26 ~v~~~~L~~~lGv~~~~~~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~ 105 (178)
.++.+.| +++-. +..+.+++++.|... ....++.++. ..+.+-. ..+.+++|++|.......+
T Consensus 9 ~~~~~~l-~~~~~-f~~l~~~~~~~l~~~-----~~~~~~~~g~---------~i~~~G~-~~~~~y~i~~G~v~~~~~~ 71 (333)
T 4ava_A 9 GARVEDL-AGMDV-FQGCPAEGLVSLAAS-----VQPLRAAAGQ---------VLLRQGE-PAVSFLLISSGSAEVSHVG 71 (333)
T ss_dssp SCCHHHH-TTSGG-GTTCCHHHHHHHHHH-----CEEEEECTTC---------EEECTTS-BCCCEEEEEECCEEEEEEC
T ss_pred hhhHHHH-hCCHh-HhcCCHHHHHHHHhh-----CeEEEECCCC---------EEEeCCC-cCCEEEEEEeeEEEEEEEC
Confidence 3556667 54422 223367788888654 2345555542 1122111 1367899999999988877
Q ss_pred CCCcEEEEEEeCCcEE
Q psy840 106 KFDDWIRIEVTKGDLI 121 (178)
Q Consensus 106 ~~d~~~ri~~~~GDli 121 (178)
.+++.+--.+.+||++
T Consensus 72 ~~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 72 DDGVAIIARALPGMIV 87 (333)
T ss_dssp TTCCEEEEEECTTCEE
T ss_pred CCCcEEEEEecCCCEe
Confidence 6666555678999987
No 216
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=42.20 E-value=35 Score=25.94 Aligned_cols=66 Identities=12% Similarity=0.014 Sum_probs=41.1
Q ss_pred ChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEEE
Q psy840 44 QDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLII 122 (178)
Q Consensus 44 ~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli~ 122 (178)
.+++++.|....+ ..+.++.++. ..+.+- -+.+.+++|++|.......+.+|+ .+--.+.+||++-
T Consensus 30 ~~~~~~~l~~~~~---~~~~~~~~ge---------~i~~~G-~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG 96 (232)
T 1zyb_A 30 CHEDFTSILDKVK---LHFIKHKAGE---------TIIKSG-NPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIE 96 (232)
T ss_dssp CHHHHHHHHHTSC---CEEEEECTTC---------EEECTT-SBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEEC
T ss_pred CHHHHHHHHhhCC---cEEEEECCCC---------EEECCC-CcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeee
Confidence 7788888876521 2455555542 112111 123679999999998876554443 4445789999873
No 217
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=41.96 E-value=23 Score=30.41 Aligned_cols=38 Identities=11% Similarity=0.097 Sum_probs=32.3
Q ss_pred EEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeee
Q psy840 93 LVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHR 130 (178)
Q Consensus 93 ~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~ 130 (178)
.=+-+...|.++..++..+++.+.+||+++.+..+++.
T Consensus 228 lSLG~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~ 265 (345)
T 3tht_A 228 LSLGSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYL 265 (345)
T ss_dssp EEESSCEEEEEECTTSCEEEEEECTTEEEEECTHHHHT
T ss_pred EECCCceeEEEccCCCceEEEEcCCCcEEEEChHHhhc
Confidence 33678999999987778899999999999999987743
No 218
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=41.79 E-value=28 Score=27.74 Aligned_cols=41 Identities=12% Similarity=0.278 Sum_probs=31.4
Q ss_pred CcEEEEEEeCCcEEEeCCCCeeeeecCCCC------cEEEEEEeecC
Q psy840 108 DDWIRIEVTKGDLIIIPAGIYHRFTLDINN------YVKAKRYFIGE 148 (178)
Q Consensus 108 d~~~ri~~~~GDli~vPaG~~H~f~~~~~~------~~~alrlF~~~ 148 (178)
..++.+.+++||+++.=..+.|+-....++ ....+|+....
T Consensus 208 ~~~v~~~~~aGdv~lf~~~~~H~s~~N~s~~~R~~R~s~~~~~~~~~ 254 (288)
T 2rdq_A 208 EHLLHSPMEPGDILLFHAHMCHKSIPNLSKDPRLMRMSMDTRVQPAK 254 (288)
T ss_dssp SCEECCCCCTTCEEEEETTCCEEEECCCCCTTCCCEEEEEEEEEETT
T ss_pred CceeecccCCCCEEEEeCCceecCCCCCCCCccceEEEEEEEEecCc
Confidence 357889999999999999999998654332 35667777663
No 219
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=41.61 E-value=37 Score=25.10 Aligned_cols=31 Identities=10% Similarity=0.132 Sum_probs=23.6
Q ss_pred cceEEEEecceEEEEEEeCCCcEEEEEEeCCcEE
Q psy840 88 DEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLI 121 (178)
Q Consensus 88 ~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli 121 (178)
.+.+++|++|...... .+|+ +-..+.+||++
T Consensus 112 ~~~ly~I~~G~v~~~~--~~g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 112 GDRMFFIQQGIVDIIM--SDGV-IATSLSDGSYF 142 (198)
T ss_dssp CSEEEEEEECCEEEEC--TTSC-EEEEECTTCEE
T ss_pred CcEEEEEEeCEEEEEe--cCCe-EEEEecCCCEe
Confidence 3679999999988765 3555 34688999986
No 220
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=41.41 E-value=48 Score=25.41 Aligned_cols=34 Identities=12% Similarity=0.049 Sum_probs=26.5
Q ss_pred ceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEEE
Q psy840 89 EEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLII 122 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli~ 122 (178)
+.+++|++|.......+.+|+ .+--.+.+||++-
T Consensus 51 ~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 85 (250)
T 3e6c_C 51 TSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIG 85 (250)
T ss_dssp CSEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred CeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 678999999999887766665 3445688999874
No 221
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=41.06 E-value=35 Score=29.78 Aligned_cols=46 Identities=20% Similarity=0.268 Sum_probs=33.1
Q ss_pred cEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCCceeecCC
Q psy840 109 DWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEPVWTPHNR 156 (178)
Q Consensus 109 ~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~gW~~~~r 156 (178)
.+.++.-+|||+|++-+|++|+--..+-+...|+-+ ..+.|.++.+
T Consensus 260 pv~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNF--A~~~Wl~~g~ 305 (354)
T 3dxt_A 260 PFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINF--ATPRWIDYGK 305 (354)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEE--CCGGGHHHHH
T ss_pred ceEEEEeCCCcEEEECCCceEEEeeccccHhHhhcc--CcHHHHHhhh
Confidence 467889999999999999999965555444444444 4566887533
No 222
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=39.38 E-value=50 Score=23.19 Aligned_cols=31 Identities=16% Similarity=0.274 Sum_probs=23.3
Q ss_pred cceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEE
Q psy840 88 DEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLII 122 (178)
Q Consensus 88 ~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~ 122 (178)
.+.+++|++|...... +|+.+ ..+.+||++-
T Consensus 79 ~~~~y~i~~G~v~~~~---~~~~~-~~~~~G~~fG 109 (154)
T 3pna_A 79 GDNFYVIDQGEMDVYV---NNEWA-TSVGEGGSFG 109 (154)
T ss_dssp CCEEEEEEESCEEEEE---TTEEE-EEECTTCEEC
T ss_pred CCeEEEEEecEEEEEE---CCEEE-EEecCCCEee
Confidence 3778999999998776 34444 4689999863
No 223
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=38.78 E-value=54 Score=22.32 Aligned_cols=52 Identities=10% Similarity=-0.010 Sum_probs=31.0
Q ss_pred ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeC---CCCeeeeec-CCCCcEEEEEE
Q psy840 89 EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIP---AGIYHRFTL-DINNYVKAKRY 144 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vP---aG~~H~f~~-~~~~~~~alrl 144 (178)
+.+++|++|...... .+|+. ..+.+||++-.- .+..+.+++ .......+++|
T Consensus 59 ~~~y~i~~G~v~~~~--~~g~~--~~l~~G~~fG~~~~~~~~~~~~~~~~a~~~~~~~~i 114 (134)
T 2d93_A 59 DSWYVILNGTVEISH--PDGKV--ENLFMGNSFGITPTLDKQYMHGIVRTKVDDCQFVCI 114 (134)
T ss_dssp CEEEECCBSCEEEEC--SSSCE--EEECTTCEESCCSSSCCEECCSEEEESSSSEEEEEE
T ss_pred CeEEEEEeCEEEEEc--CCCcE--EEecCCCccChhHhcCCCcceeEEEEEecceEEEEE
Confidence 568999999998664 34554 558899986321 233443344 33334455544
No 224
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=38.70 E-value=1.5e+02 Score=24.70 Aligned_cols=70 Identities=11% Similarity=0.030 Sum_probs=44.3
Q ss_pred hcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeC--------CcEEEeCC
Q psy840 54 DRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTK--------GDLIIIPA 125 (178)
Q Consensus 54 ~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~--------GDli~vPa 125 (178)
.-.|...++++|.++. -+...+-..|=....+.|.+.+.+.+ ..+...... .|.+.||.
T Consensus 25 ~~~y~~f~~~~L~~Ge----------~~~~~~~~~E~~iv~l~G~~~V~~~g---~~~~~~g~R~svF~~~~p~~lYvp~ 91 (270)
T 2qjv_A 25 GWEYVGFDVWQLXAGE----------SITLPSDERERCLVLVAGLASVXAAD---SFFYRIGQRMSPFERIPAYSVYLPH 91 (270)
T ss_dssp TSSSCEEEEEEECTTC----------EEEECCSSEEEEEEEEESCEEEEETT---EEEEEECCCSSGGGCSCCCEEEECS
T ss_pred CcEEeEEEEEEecCCC----------EEEecCCCcEEEEEEecceEEEEECC---EEEeccccccccccCCCCcEEEECC
Confidence 4466777888888762 12222222355577789999988853 322222233 59999999
Q ss_pred CCeeeeecCCC
Q psy840 126 GIYHRFTLDIN 136 (178)
Q Consensus 126 G~~H~f~~~~~ 136 (178)
|+.=.|+...+
T Consensus 92 g~~v~i~a~~~ 102 (270)
T 2qjv_A 92 HTEAXVTAETD 102 (270)
T ss_dssp SCCEEEEESSS
T ss_pred CCEEEEEecCC
Confidence 99766776554
No 225
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=38.57 E-value=15 Score=23.69 Aligned_cols=36 Identities=14% Similarity=0.105 Sum_probs=19.5
Q ss_pred EEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCCceeecC
Q psy840 113 IEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEPVWTPHN 155 (178)
Q Consensus 113 i~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~gW~~~~ 155 (178)
+.+++||+|.|= ....++...+...-++..||.|-+
T Consensus 23 Ls~~~Gd~i~v~-------~~~~~gWw~g~~~~~g~~G~~P~n 58 (65)
T 2lj0_A 23 LELRDGDIVDVM-------EKCDDGWFVGTSRRTKQFGTFPGN 58 (65)
T ss_dssp CCBCTTCEEEEE-------EECTTSEEEEEETTTCCEEEEETT
T ss_pred cCCCCCCEEEEe-------EeCCCCEEEEEECCCCCEEEEehh
Confidence 777788877662 122233444433334566777744
No 226
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=38.29 E-value=39 Score=26.89 Aligned_cols=56 Identities=11% Similarity=0.004 Sum_probs=34.5
Q ss_pred cCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCee---eeecCCCCcEEEEEEe
Q psy840 86 HTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYH---RFTLDINNYVKAKRYF 145 (178)
Q Consensus 86 H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H---~f~~~~~~~~~alrlF 145 (178)
...--+.|+++|...+.+.+ +. .+.+++||.+++-....- .........+..++|+
T Consensus 138 ~~~~~~v~~l~G~~~v~~~~--~~--~~~L~~~d~l~~~~~~~~~~~~~~~~g~~~~~~i~l~ 196 (200)
T 1yll_A 138 TASTLLLFAQQDGVAISLQG--QP--RGQLAAHDCLCAEGLQGLQHWRLTAHEPAWVCAVELD 196 (200)
T ss_dssp CCSEEEEEESSSCEEEEETT--EE--EEEECTTCEEEEESCCSCEEEEEEEEEEEEEEEEEEE
T ss_pred CCCEEEEEEccCcEEEEcCC--Cc--eeecCCCCEEEEeCCCccceeEeccCCceEEEEEEEe
Confidence 44457889999998876632 22 389999999998554322 2333333334455554
No 227
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=36.63 E-value=43 Score=29.38 Aligned_cols=44 Identities=14% Similarity=0.178 Sum_probs=31.9
Q ss_pred cEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCCceeec
Q psy840 109 DWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEPVWTPH 154 (178)
Q Consensus 109 ~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~gW~~~ 154 (178)
.++++.-+|||+|++=+|++|+--..+-+.-.|+-+ ..+-|.++
T Consensus 278 pv~r~vQ~pGEfViTfP~aYH~gfn~GfN~aEAvNF--A~~~Wl~~ 321 (381)
T 2ox0_A 278 PFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNF--ATRRWIEY 321 (381)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEECSSEEEEEEEE--CCTTHHHH
T ss_pred ceEEEEecCCCEEEECCCcEEEeecCcccHHHHhcc--CcHHHHHH
Confidence 467889999999999999999966555555556655 33455543
No 228
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=36.44 E-value=38 Score=25.49 Aligned_cols=63 Identities=16% Similarity=0.239 Sum_probs=36.7
Q ss_pred ChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEE
Q psy840 44 QDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLI 121 (178)
Q Consensus 44 ~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli 121 (178)
.+++++.|... ..+.++.++. ..+.+-. +.+.+++|++|.......+.+|+ .+--.+.+||++
T Consensus 22 ~~~~~~~l~~~-----~~~~~~~~g~---------~i~~~g~-~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 85 (232)
T 2gau_A 22 NEEERELLDKE-----IQPFPCKKAS---------TVFSEGD-IPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFF 85 (232)
T ss_dssp CHHHHHHHHHH-----CEEEEECTTC---------EEECTTC-CCCEEEEEEESCEEEEC-----CCCEEEEECTTCEE
T ss_pred CHHHHHHHHhh-----CeEEEECCCC---------EEEeCCC-CCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 56777777652 3555666542 1222111 23678999999998876544443 344678999987
No 229
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=34.00 E-value=73 Score=24.75 Aligned_cols=33 Identities=18% Similarity=0.118 Sum_probs=24.9
Q ss_pred ceEEEEecceEEEEEEeCCC--cEEEEEEeCCcEE
Q psy840 89 EEIRLVLDGSGYFDVRDKFD--DWIRIEVTKGDLI 121 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~~~d--~~~ri~~~~GDli 121 (178)
+.+++|++|+........++ ...-..+.+||++
T Consensus 199 ~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 199 DEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred CEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 67899999999887655444 2455688999987
No 230
>2lkt_A Retinoic acid receptor responder protein 3; TIG3, human tumor suppressor II family, NLPC/P60, hydrolase; NMR {Homo sapiens}
Probab=33.38 E-value=27 Score=25.01 Aligned_cols=27 Identities=33% Similarity=0.127 Sum_probs=18.5
Q ss_pred EEeCCcEEEeCCCC-eeeeecCCCCcEE
Q psy840 114 EVTKGDLIIIPAGI-YHRFTLDINNYVK 140 (178)
Q Consensus 114 ~~~~GDli~vPaG~-~H~f~~~~~~~~~ 140 (178)
+-+|||+|.+|.+. .||.--.+++.+.
T Consensus 7 ep~pGDlI~~~r~~Y~H~gIYvGdg~Vi 34 (125)
T 2lkt_A 7 EPKPGDLIEIFRLGYEHWALYIGDGYVI 34 (125)
T ss_dssp CCCTTCEEEEECSSSCEEEEEEETTEEE
T ss_pred CCCCCCEEEEeCCCccEEEEEeCCCeEE
Confidence 45799999999765 6886544445443
No 231
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=33.14 E-value=41 Score=27.26 Aligned_cols=40 Identities=18% Similarity=0.178 Sum_probs=30.2
Q ss_pred cEEEEEEeCCcEEEeCCCCeeeeecCC--C---CcEEEEEEeecC
Q psy840 109 DWIRIEVTKGDLIIIPAGIYHRFTLDI--N---NYVKAKRYFIGE 148 (178)
Q Consensus 109 ~~~ri~~~~GDli~vPaG~~H~f~~~~--~---~~~~alrlF~~~ 148 (178)
.++.+.+++||+++.=..+.|+-.... . .....+++....
T Consensus 218 ~~v~~~~~aGd~v~f~~~l~H~s~~N~~ss~~~R~a~~~~y~~~~ 262 (313)
T 2fct_A 218 SAVPMQMKAGQFIIFWSTLMHASYPHSGESQEMRMGFASRYVPSF 262 (313)
T ss_dssp GCEEECBCTTEEEEEETTSEEEECCBCSSSSSCEEEEEEEEEETT
T ss_pred ceeEeeeCCceEEEEeCCceeeCCCCCCCCCCceEEEEEEEECCC
Confidence 568899999999999999999976443 2 335566766553
No 232
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=33.08 E-value=50 Score=26.50 Aligned_cols=37 Identities=22% Similarity=0.427 Sum_probs=29.9
Q ss_pred EEecceEEEEEEeCC----------CcEEEEEEeCCcEEEeCCCCee
Q psy840 93 LVLDGSGYFDVRDKF----------DDWIRIEVTKGDLIIIPAGIYH 129 (178)
Q Consensus 93 ~il~G~g~f~v~~~~----------d~~~ri~~~~GDli~vPaG~~H 129 (178)
.=|-+...|.++... +..+++.+.+||+++....++.
T Consensus 159 lSLG~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~G~~r~ 205 (238)
T 2iuw_A 159 LSFGATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEGATQA 205 (238)
T ss_dssp EEEESCEEEEEEECCC--------CCCEEEEEECTTCEEEEEETHHH
T ss_pred EECCCCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEChhhhC
Confidence 336688899998754 3678999999999999998754
No 233
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=31.07 E-value=97 Score=21.36 Aligned_cols=61 Identities=20% Similarity=0.218 Sum_probs=37.2
Q ss_pred ChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEe
Q psy840 44 QDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIII 123 (178)
Q Consensus 44 ~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~v 123 (178)
.++.++.|... ....++.++. ..+..-. +.+.+++|++|...... ++. +--.+.+||++--
T Consensus 39 ~~~~~~~l~~~-----~~~~~~~~g~---------~i~~~g~-~~~~~y~i~~G~v~~~~---~~~-~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 39 SDGCLRALAME-----FQTVHCAPGD---------LIYHAGE-SVDSLCFVVSGSLEVIQ---DDE-VVAILGKGDVFGD 99 (160)
T ss_dssp CHHHHHHHHTT-----CEEEEECTTC---------EEECTTS-BCCEEEEEEESEEEEEE---TTE-EEEEEETTCEEEC
T ss_pred CHHHHHHHHHh-----ceeeeeCCCC---------EEEeCCC-CccEEEEEEeeEEEEEE---CCE-EEEEecCCCEeCc
Confidence 66777777642 2445555542 1121111 13689999999988765 233 3467899999754
No 234
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=29.29 E-value=66 Score=28.21 Aligned_cols=49 Identities=18% Similarity=0.150 Sum_probs=28.1
Q ss_pred cEEEEEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCCceeecCCCCC
Q psy840 109 DWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEPVWTPHNRPAD 159 (178)
Q Consensus 109 ~~~ri~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~gW~~~~r~~d 159 (178)
.+.++.-+|||+|++=+|++|+--..+-+...|+- -..+-|.++.+.+.
T Consensus 303 pv~r~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvN--FA~~~Wl~~g~~a~ 351 (373)
T 3opt_A 303 RCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVN--FALEEWLPIGKKAG 351 (373)
T ss_dssp CCEEEEECTTCEEEECTTCCEEEEESSSEEEEEEE--ECCC----------
T ss_pred ceEEEEECCCCEEEECCCceEEEEecCccHHHHHc--cCcHHHHHhhccCc
Confidence 35688999999999999999996555444444443 34567888766543
No 235
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=28.37 E-value=55 Score=24.25 Aligned_cols=53 Identities=8% Similarity=0.043 Sum_probs=31.6
Q ss_pred ceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEe---CCCCeeeeecCCCCcEEEEEEe
Q psy840 89 EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIII---PAGIYHRFTLDINNYVKAKRYF 145 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~v---PaG~~H~f~~~~~~~~~alrlF 145 (178)
+.+++|++|...... .+++. ..+.+||++=. =.|.++.+++.......+++|-
T Consensus 114 ~~ly~I~~G~v~v~~--~~g~~--~~l~~G~~fGe~~~~~~~~~~~~v~a~~~~~l~~i~ 169 (202)
T 3bpz_A 114 KKMYFIQHGVVSVLT--KGNKE--MKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLS 169 (202)
T ss_dssp CEEEEEEECEEEEEC--TTSCC--EEEETTCEECHHHHHHCSBCSSEEEESSCEEEEEEE
T ss_pred CeEEEEeccEEEEEE--CCCeE--EEEcCCCEeccHHHhcCCCcccEEEEeeEEEEEEEE
Confidence 679999999988754 34443 46899998621 1234444444433445555553
No 236
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=27.84 E-value=1e+02 Score=24.03 Aligned_cols=57 Identities=11% Similarity=-0.002 Sum_probs=35.0
Q ss_pred ceEEEEecceEEEEEEe-CCC-cEEEEEEeCCcEEE---eCCCCeeeeecCCCCcEEEEEEe
Q psy840 89 EEIRLVLDGSGYFDVRD-KFD-DWIRIEVTKGDLII---IPAGIYHRFTLDINNYVKAKRYF 145 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~-~~d-~~~ri~~~~GDli~---vPaG~~H~f~~~~~~~~~alrlF 145 (178)
+.+++|++|+....... .++ ..+--.+.+||++= +=.+.+..+++.......++.|-
T Consensus 199 ~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~i~ 260 (299)
T 3shr_A 199 DTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEKALQGEDVRTANVIAAEAVTCLVID 260 (299)
T ss_dssp CEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEECGGGGSSSEECSSEEEESSSEEEEEEE
T ss_pred CEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEeChHHHhCCCCcceEEEECCCEEEEEEe
Confidence 56889999999887765 233 34456789999863 11244444444444445555553
No 237
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=27.81 E-value=1e+02 Score=25.99 Aligned_cols=56 Identities=14% Similarity=-0.012 Sum_probs=35.7
Q ss_pred ceEEEEecceEEEEEEeCCCc---EEEEEEeCCcEEEeCC--CCeeeeecCCCCcEEEEEE
Q psy840 89 EEIRLVLDGSGYFDVRDKFDD---WIRIEVTKGDLIIIPA--GIYHRFTLDINNYVKAKRY 144 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~~~d~---~~ri~~~~GDli~vPa--G~~H~f~~~~~~~~~alrl 144 (178)
+.+++|++|.........+|+ .+--.+.+||++=-.+ |.++..++........++|
T Consensus 84 ~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe~~l~~~~~~~tv~A~~~~~l~~i 144 (469)
T 1o7f_A 84 TNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGESILDNTPRHATIVTRESSELLRI 144 (469)
T ss_dssp CEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECGGGGGTCBCSSEEEESSSEEEEEE
T ss_pred CcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcchhhhCCCCccceEEEccceeEEEE
Confidence 678999999999887766653 5556889999874433 3333344333333445544
No 238
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=26.40 E-value=7 Score=28.13 Aligned_cols=29 Identities=31% Similarity=0.462 Sum_probs=21.5
Q ss_pred EEEec---ceEEEEEEeCCCcEEEEEEeCCcEEEeC
Q psy840 92 RLVLD---GSGYFDVRDKFDDWIRIEVTKGDLIIIP 124 (178)
Q Consensus 92 ~~il~---G~g~f~v~~~~d~~~ri~~~~GDli~vP 124 (178)
.|++. |||...+.+.. ...+++||+|+|=
T Consensus 33 TYvI~GerGSG~I~lNGAA----Arl~~~GD~vII~ 64 (96)
T 1vc3_B 33 TYALPGERGSGVIGINGAA----AHLVKPGDLVILV 64 (96)
T ss_dssp EECEEECTTTTCEEEEGGG----GGTCCTTCEEEEE
T ss_pred EEEEEccCCCCeEEEchHH----HccCCCCCEEEEE
Confidence 35554 57889998855 2588999999874
No 239
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=26.07 E-value=29 Score=21.61 Aligned_cols=12 Identities=42% Similarity=0.758 Sum_probs=8.0
Q ss_pred EEEeCCcEEEeC
Q psy840 113 IEVTKGDLIIIP 124 (178)
Q Consensus 113 i~~~~GDli~vP 124 (178)
+.+++||+|.|-
T Consensus 23 Ls~~~Gd~i~v~ 34 (65)
T 2j05_A 23 ISFLKGDMFIVH 34 (65)
T ss_dssp CCBCTTCEEEEE
T ss_pred CcCCCCCEEEEe
Confidence 566777777663
No 240
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=25.37 E-value=1.8e+02 Score=23.42 Aligned_cols=37 Identities=14% Similarity=0.047 Sum_probs=26.5
Q ss_pred EEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCC
Q psy840 91 IRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDIN 136 (178)
Q Consensus 91 i~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~ 136 (178)
..|+++|++.+ ++ ..+++||++.+..+..=.+++.++
T Consensus 184 ~~~v~~G~v~v-----~g----~~l~~gd~~~~~~~~~l~l~a~~~ 220 (242)
T 1tq5_A 184 WIQVVKGNVTI-----NG----VKASTSDGLAIWDEQAISIHADSD 220 (242)
T ss_dssp EEEEEESEEEE-----TT----EEEETTCEEEEESCSCEEEEESSS
T ss_pred EEEEccCcEEE-----CC----EEeCCCCEEEECCCCeEEEEeCCC
Confidence 47888998764 22 478999999998776555665544
No 241
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=25.05 E-value=56 Score=25.58 Aligned_cols=38 Identities=18% Similarity=0.266 Sum_probs=30.1
Q ss_pred EEEecceEEEEEEeCC---------CcEEEEEEeCCcEEEeCCCCee
Q psy840 92 RLVLDGSGYFDVRDKF---------DDWIRIEVTKGDLIIIPAGIYH 129 (178)
Q Consensus 92 ~~il~G~g~f~v~~~~---------d~~~ri~~~~GDli~vPaG~~H 129 (178)
..=+-++..|.++... +..+++.++.||+++.+.++..
T Consensus 132 svSLG~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~~q~ 178 (204)
T 3s57_A 132 SVSFGASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNT 178 (204)
T ss_dssp EEEEESCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETTHHH
T ss_pred EEECCCceEEEEEEcCCCccccccCCceEEEECCCCCEEEECchhhh
Confidence 4446789999998642 2457899999999999999876
No 242
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=24.56 E-value=48 Score=27.49 Aligned_cols=40 Identities=15% Similarity=0.129 Sum_probs=29.6
Q ss_pred cEEEEEEeCCcEEEeCCCCeeeeecCC--C---CcEEEEEEeecC
Q psy840 109 DWIRIEVTKGDLIIIPAGIYHRFTLDI--N---NYVKAKRYFIGE 148 (178)
Q Consensus 109 ~~~ri~~~~GDli~vPaG~~H~f~~~~--~---~~~~alrlF~~~ 148 (178)
.++.+.|++||+++.-..+.|.-.... + .....+++....
T Consensus 220 ~~v~~~~~aGd~v~f~~~~~H~s~~N~~ts~~~R~a~~~~y~~~~ 264 (319)
T 3gja_A 220 QAYPMVLKPGEAVIFWSNTMHASLPHTGSKTDYRMGFAARYVPTQ 264 (319)
T ss_dssp -CCBCCBCTTEEEEEETTSCEEECCCCSCTTCCEEEEEEEEEETT
T ss_pred ceeEeeECCCeEEEEcCCccccCCCCCCCCCCcEEEEEEEEECCC
Confidence 466789999999999999999975444 2 335566777654
No 243
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=24.44 E-value=20 Score=31.83 Aligned_cols=15 Identities=47% Similarity=0.784 Sum_probs=13.9
Q ss_pred EeCCcEEEeCCCCee
Q psy840 115 VTKGDLIIIPAGIYH 129 (178)
Q Consensus 115 ~~~GDli~vPaG~~H 129 (178)
.+|||.|.||+|+|+
T Consensus 54 A~pGdvI~L~~G~Y~ 68 (410)
T 2inu_A 54 ARPGAAIIIPPGDYD 68 (410)
T ss_dssp SCCCEEEECCSEEEE
T ss_pred CCCCCEEEECCCeec
Confidence 578999999999997
No 244
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=24.41 E-value=57 Score=22.07 Aligned_cols=28 Identities=18% Similarity=0.386 Sum_probs=21.3
Q ss_pred cceEEEEecceEEEEEEeCCCcEEEEEEeCCcEE
Q psy840 88 DEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLI 121 (178)
Q Consensus 88 ~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli 121 (178)
.+.+++|++|.......+ ...+.+||++
T Consensus 52 ~~~~y~i~~G~v~~~~~~------~~~~~~G~~~ 79 (138)
T 1vp6_A 52 GDRMFFVVEGSVSVATPN------PVELGPGAFF 79 (138)
T ss_dssp CCEEEEEEESCEEECSSS------CEEECTTCEE
T ss_pred cceEEEEEeeEEEEEeCC------cceECCCCEe
Confidence 367899999998876533 2578999986
No 245
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=24.39 E-value=10 Score=28.05 Aligned_cols=57 Identities=12% Similarity=0.099 Sum_probs=36.3
Q ss_pred hHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEec---ceEEEEEEeCCCcEEEEEEeCCcEE
Q psy840 45 DEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLD---GSGYFDVRDKFDDWIRIEVTKGDLI 121 (178)
Q Consensus 45 ~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~---G~g~f~v~~~~d~~~ri~~~~GDli 121 (178)
|++|=+.+.=.-|...++++++.+ ++|- .|++. |||...+.+.. ...+++||.|
T Consensus 32 D~~Ll~aA~i~~~E~V~I~NvnNG---------~Rf~----------TYvI~GerGSg~I~lNGAA----Ar~~~~GD~v 88 (114)
T 3oug_A 32 DSEIMKQANIIENEKVQVVNLNNG---------ERLE----------TYVIKGEPNSKTIALNGPA----ARRCEIGDQL 88 (114)
T ss_dssp EHHHHHHTTCCTTBEEEEEETTTC---------CEEE----------EEEEEECTTSCCEEEEGGG----GGGCCTTCEE
T ss_pred CHHHHHHcCCCcCCEEEEEECCCC---------ceEE----------EEEEEccCCCCEEEeCCHH----HhccCCCCEE
Confidence 444444444455666777777665 1221 45654 57889998855 2588999999
Q ss_pred EeC
Q psy840 122 IIP 124 (178)
Q Consensus 122 ~vP 124 (178)
+|=
T Consensus 89 II~ 91 (114)
T 3oug_A 89 FII 91 (114)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 246
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=24.35 E-value=31 Score=21.54 Aligned_cols=37 Identities=16% Similarity=0.248 Sum_probs=20.5
Q ss_pred EEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCCceeecC
Q psy840 113 IEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEPVWTPHN 155 (178)
Q Consensus 113 i~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~gW~~~~ 155 (178)
+.+++||+|.|=... ..+....+-..-.+..||.|.+
T Consensus 25 Lsf~~Gd~i~v~~~~------~~~gW~~g~~~~~g~~G~fP~~ 61 (67)
T 3rnj_A 25 LSFKEGDLITLLVPE------ARDGWHYGESEKTKMRGWFPFS 61 (67)
T ss_dssp CCBCTTCEEEECSSS------CBTTEEEEEETTTCCEEEEEGG
T ss_pred ccCCCCCEEEEeecc------CCCCCEEEEECCCCCEEEEEHH
Confidence 678888888774221 1223344443345566777743
No 247
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=24.27 E-value=24 Score=21.72 Aligned_cols=35 Identities=14% Similarity=0.167 Sum_probs=18.6
Q ss_pred EEEeCCcEEEeCCCCeeeeecCCCCcEEEEEEeecCCceeec
Q psy840 113 IEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEPVWTPH 154 (178)
Q Consensus 113 i~~~~GDli~vPaG~~H~f~~~~~~~~~alrlF~~~~gW~~~ 154 (178)
+.+++||+|.|-. ...+....+..+-++..||.|-
T Consensus 20 Ls~~~Gd~i~v~~-------~~~~~W~~g~~~~~g~~G~fP~ 54 (62)
T 2fpe_A 20 LELEVDDPLLVEL-------QAEDYWYEAYNMRTGARGVFPA 54 (62)
T ss_dssp CCBCTTCEEEEEE-------ECTTSEEEEEETTTCCEEEEEG
T ss_pred CcCCCCCEEEEEE-------ecCCCEEEEEECCCCCEEEech
Confidence 6677788877731 1223344443334555666663
No 248
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=24.26 E-value=1.1e+02 Score=20.80 Aligned_cols=60 Identities=10% Similarity=0.016 Sum_probs=35.7
Q ss_pred ChHHHHHHHHhcCCCeeeEEEEcCCCCCCHHHHhhhhccceecCcceEEEEecceEEEEEEeCCCcEEEEEEeCCcEEE
Q psy840 44 QDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLII 122 (178)
Q Consensus 44 ~~~~l~~l~~~~gy~~~Dvv~l~~~~~p~~e~~~~~f~~eH~H~~dEi~~il~G~g~f~v~~~~d~~~ri~~~~GDli~ 122 (178)
.++.++.|+..- .+..+.++. ..+.+- -..+.+++|++|...... ++.. --.+.+||++-
T Consensus 35 ~~~~~~~l~~~~-----~~~~~~~g~---------~i~~~g-~~~~~~y~i~~G~v~~~~---~g~~-~~~~~~G~~fG 94 (139)
T 3ocp_A 35 ELSQIQEIVDCM-----YPVEYGKDS---------CIIKEG-DVGSLVYVMEDGKVEVTK---EGVK-LCTMGPGKVFG 94 (139)
T ss_dssp CHHHHHHHHHHC-----EEEEECSSC---------EEECTT-SCCCEEEEEEECCEEEEE---TTEE-EEEECTTCEES
T ss_pred CHHHHHHHHHhc-----EEEecCCCC---------EEEeCC-CcCCEEEEEEeCEEEEEE---CCEE-EEEeCCCCEec
Confidence 567777776542 344444431 112111 124678999999988743 4443 35789999863
No 249
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=23.05 E-value=9 Score=27.85 Aligned_cols=30 Identities=17% Similarity=0.166 Sum_probs=22.2
Q ss_pred EEEecc--eEEEEEEeCCCcEEEEEEeCCcEEEeCC
Q psy840 92 RLVLDG--SGYFDVRDKFDDWIRIEVTKGDLIIIPA 125 (178)
Q Consensus 92 ~~il~G--~g~f~v~~~~d~~~ri~~~~GDli~vPa 125 (178)
.|++.| ||...+.+.. ...+++||+|+|=+
T Consensus 33 TYvI~GeGSG~I~lNGAA----Arl~~~GD~vII~a 64 (102)
T 3plx_B 33 TYTIATQEEGVVCLNGAA----ARLAEVGDKVIIMS 64 (102)
T ss_dssp EECEEESSTTCEEEEGGG----GGGCCTTCEEEEEE
T ss_pred EEEEEcCCCCEEEeCcHH----HhccCCCCEEEEEE
Confidence 456654 6888998755 25899999998854
No 250
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=22.36 E-value=1.6e+02 Score=24.06 Aligned_cols=43 Identities=14% Similarity=0.059 Sum_probs=27.2
Q ss_pred eEEEEecceEEEEEEeCCCcEEEEEEeCCcEEEeCCCCeeeeecCCC
Q psy840 90 EIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDIN 136 (178)
Q Consensus 90 Ei~~il~G~g~f~v~~~~d~~~ri~~~~GDli~vPaG~~H~f~~~~~ 136 (178)
-..|+++|++.+. +.++. ...+.+||++.+-.+..=.+++.++
T Consensus 204 ~~l~v~~G~v~v~--g~~~~--~~~l~~gd~~~l~~~~~l~l~a~~~ 246 (256)
T 2vec_A 204 AYLQSIHGKFHAL--THHEE--KAALTCGDGAFIRDEANITLVADSP 246 (256)
T ss_dssp EEEEEEESCEEEE--ETTEE--EEEECTTCEEEEESCSEEEEEESSS
T ss_pred EEEEEEECEEEEC--Ccccc--ceEECCCCEEEECCCCeEEEEeCCC
Confidence 3467888887653 31111 1568999999997766555555444
No 251
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=21.35 E-value=26 Score=26.14 Aligned_cols=35 Identities=6% Similarity=-0.099 Sum_probs=25.0
Q ss_pred ceEEEEecceEEEEEEeCCCc-EEEEEEeCCcEEEe
Q psy840 89 EEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLIII 123 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~~~d~-~~ri~~~~GDli~v 123 (178)
+.+++|++|.......+.+|+ .+--.+.+||++-.
T Consensus 51 ~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~ 86 (227)
T 3dkw_A 51 HAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAE 86 (227)
T ss_dssp CEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESC
T ss_pred ceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeee
Confidence 679999999998776554443 33346789998753
No 252
>4dot_A Group XVI phospholipase A2; alpha/beta fold, phospholipase/acyltransferase, phosphatidyl phosphatidylethanolamine, membrane, hydrolase; 1.96A {Homo sapiens}
Probab=21.04 E-value=51 Score=24.84 Aligned_cols=21 Identities=33% Similarity=0.154 Sum_probs=14.7
Q ss_pred EEEeCCcEEEeC-CCCeeeeec
Q psy840 113 IEVTKGDLIIIP-AGIYHRFTL 133 (178)
Q Consensus 113 i~~~~GDli~vP-aG~~H~f~~ 133 (178)
-.++|||+|.++ .+..||-.-
T Consensus 6 ~~~~pGDlv~~~~~~~~H~gIY 27 (140)
T 4dot_A 6 PEPKPGDLIEIFRPFYRHWAIY 27 (140)
T ss_dssp CCCCTTCEEEEEETTEEEEEEE
T ss_pred cCCCCCCEEEEeCCCCCEEEEE
Confidence 357889999776 456788643
No 253
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=20.85 E-value=17 Score=24.99 Aligned_cols=32 Identities=13% Similarity=0.080 Sum_probs=21.3
Q ss_pred ceEEEEecceEEEEEEeCCCcE-EE--EEEeCCcEE
Q psy840 89 EEIRLVLDGSGYFDVRDKFDDW-IR--IEVTKGDLI 121 (178)
Q Consensus 89 dEi~~il~G~g~f~v~~~~d~~-~r--i~~~~GDli 121 (178)
+.+++|++|..... ...+++- +- ..+.+||++
T Consensus 48 ~~~y~i~~G~v~~~-~~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 48 NEMLFIIRGRLESV-TTDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp SEEEEEEECCCEEE-CCSSCSSSSSCEEECCTTCBS
T ss_pred CeEEEEEeeEEEEE-EcCCCcceeeeeeeecCCCEe
Confidence 67899999999954 3334431 11 177899975
Done!