RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy840
(178 letters)
>d1vr3a1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 179
Score = 217 bits (553), Expect = 1e-73
Identities = 99/179 (55%), Positives = 124/179 (69%), Gaps = 8/179 (4%)
Query: 1 MVRVWYMDTDVKSDQRLEHHRTPKEYLDLQTLNKLTGVEYFNV------QDEVLTKLRKD 54
MV+ WYMD + +D R H P + L+ L L GV Y+ + D L K+RK
Sbjct: 1 MVQAWYMD-ESTADPRKPHRAQPDRPVSLEQLRTL-GVLYWKLDADKYENDPELEKIRKM 58
Query: 55 RNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIE 114
RNY++ D IT KD LPNYEEK+K F+ EHLH DEEIR +L+GSGYFDVRDK D WIRI
Sbjct: 59 RNYSWMDIITICKDTLPNYEEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRIS 118
Query: 115 VTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEPVWTPHNRPADDMECRLEYLKKIQN 173
+ KGD+I +PAGIYHRFTLD NYVKA R F+GEPVWTP+NRPAD + R++Y+ ++
Sbjct: 119 MEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTPYNRPADHFDARVQYMSFLEG 177
>d1zrra1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Klebsiella
pneumoniae [TaxId: 573]}
Length = 179
Score = 133 bits (335), Expect = 1e-40
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 2/112 (1%)
Query: 45 DEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVR 104
+ KL ++ Y D I+ D P E + F EH H ++E+R ++G+G F +
Sbjct: 58 QHAIDKLVAEKGYQSWDVISLRADN-PQKEALREKFLNEHTHGEDEVRFFVEGAGLFCLH 116
Query: 105 DKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEPVWTPHNR 156
D+ ++ K DLI +PA H F + A R F W
Sbjct: 117 IG-DEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNPEGWIAQFT 167
>d2d40a1 b.82.1.23 (A:35-342) Gentisate 1,2-dioxygenase {Escherichia
coli [TaxId: 562]}
Length = 308
Score = 45.2 bits (106), Expect = 1e-06
Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 5/49 (10%)
Query: 84 HLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFT 132
TD I V++GSG + ++ + D+ ++P F
Sbjct: 238 ARTTDSTIYHVVEGSGQVIIGNE-----TFSFSAKDIFVVPTWHGVSFQ 281
Score = 40.9 bits (95), Expect = 3e-05
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 84 HLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRF 131
H H +R +++G G F D R + +GD I+ P +H
Sbjct: 70 HRHNQSALRFIVEGKGAFTAVDG----ERTPMNEGDFILTPQWRWHDH 113
>d3bu7a1 b.82.1.23 (A:19-373) Gentisate 1,2-dioxygenase
{Silicibacter pomeroyi [TaxId: 89184]}
Length = 355
Score = 45.1 bits (106), Expect = 1e-06
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 84 HLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRF 131
H HT I V G GY V K R + ++ D+ +PA +H
Sbjct: 272 HRHTGNVIYNVAKGQGYSIVGGK-----RFDWSEHDIFCVPAWTWHEH 314
Score = 41.2 bits (96), Expect = 3e-05
Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 84 HLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRF 131
H H +R +++GSG + + D ++E+ D ++ P G +H
Sbjct: 101 HRHAASALRFIMEGSGAYTIVDG----HKVELGANDFVLTPNGTWHEH 144
>d1juha_ b.82.1.5 (A:) Quercetin 2,3-dioxygenase {Aspergillus
japonicus [TaxId: 34381]}
Length = 348
Score = 42.5 bits (99), Expect = 8e-06
Identities = 10/49 (20%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Query: 84 HLHTDE-EIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRF 131
H+H E GS + + ++ GD +P + H F
Sbjct: 64 HIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTF 112
Score = 36.3 bits (83), Expect = 0.001
Identities = 9/51 (17%), Positives = 17/51 (33%), Gaps = 4/51 (7%)
Query: 84 HLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLD 134
V +G + D E+ GD+ IP G+ ++ +
Sbjct: 266 WSFPGACAFQVQEGRVVVQIGDYAA----TELGSGDVAFIPGGVEFKYYSE 312
>d2phda1 b.82.1.23 (A:17-367) Gentisate 1,2-dioxygenase
{Pseudaminobacter salicylatoxidans [TaxId: 93369]}
Length = 351
Score = 42.0 bits (98), Expect = 1e-05
Identities = 7/49 (14%), Positives = 19/49 (38%), Gaps = 5/49 (10%)
Query: 84 HLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFT 132
+ V +G+G + + ++ KGD+ ++P+ +
Sbjct: 279 RNEVGSTVFQVFEGAGAVVMNGE-----TTKLEKGDMFVVPSWVPWSLQ 322
Score = 39.0 bits (90), Expect = 2e-04
Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 84 HLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRF 131
H H+ R V++G G + V + + +++GDL++ P +H
Sbjct: 103 HRHSQNAFRFVVEGEGVWTVVNG----DPVRMSRGDLLLTPGWCFHGH 146
>d1j58a_ b.82.1.2 (A:) Oxalate decarboxylase OxdC (YvrK) {Bacillus
subtilis [TaxId: 1423]}
Length = 372
Score = 40.8 bits (95), Expect = 4e-05
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 80 FYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYH 129
H H + E ++ GS + D+ +V +GDL P+G+ H
Sbjct: 84 IRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPH 133
Score = 34.2 bits (78), Expect = 0.006
Identities = 7/43 (16%), Positives = 12/43 (27%)
Query: 89 EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRF 131
E + + G V GD+ +P + H
Sbjct: 272 HEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYV 314
>d1y3ta1 b.82.1.5 (A:5-334) Hypothetical protein YxaG {Bacillus
subtilis [TaxId: 1423]}
Length = 330
Score = 40.7 bits (94), Expect = 4e-05
Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 6/50 (12%)
Query: 84 HLHTDE-EIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFT 132
H H E L+G + I++ GD + +PA H +
Sbjct: 230 HYHEYHTETFYCLEGQMTMWTDGQ-----EIQLNPGDFLHVPANTVHSYR 274
Score = 36.8 bits (84), Expect = 8e-04
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 6/51 (11%)
Query: 83 EHLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFT 132
H+H D E LVLDG + + R + GD IPAG H +
Sbjct: 57 LHVHKDTHEGILVLDGKLELTLDGE-----RYLLISGDYANIPAGTPHSYR 102
>d1sfna_ b.82.1.11 (A:) Hypothetical protein DR1152 {Deinococcus
radiodurans [TaxId: 1299]}
Length = 245
Score = 39.7 bits (92), Expect = 6e-05
Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 5/57 (8%)
Query: 75 EKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRF 131
S +H E L+L+G G + + + VT GD+I + A +
Sbjct: 173 APGASLPYAEVHYMEHGLLMLEGEGLYKLEEN-----YYPVTAGDIIWMGAHCPQWY 224
Score = 31.2 bits (70), Expect = 0.049
Identities = 10/78 (12%), Positives = 17/78 (21%), Gaps = 8/78 (10%)
Query: 84 HLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKR 143
+ VL G V + + + D + +PAG H
Sbjct: 64 TESVYQRFAFVLSGEVDVAVGGE-----TRTLREYDYVYLPAGEKHML---TAKTDARVS 115
Query: 144 YFIGEPVWTPHNRPADDM 161
F +
Sbjct: 116 VFEKPYQTVEGVQAPGVY 133
>d1sq4a_ b.82.1.11 (A:) Glyoxylate-induced protein PA1140
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 273
Score = 39.7 bits (92), Expect = 7e-05
Identities = 11/57 (19%), Positives = 17/57 (29%), Gaps = 5/57 (8%)
Query: 75 EKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRF 131
E H E VL+G + + +EV GD + + A
Sbjct: 197 EPGGVIPFAETHVMEHGLYVLEGKAVYRLNQD-----WVEVEAGDFMWLRAFCPQAC 248
Score = 31.6 bits (71), Expect = 0.035
Identities = 11/81 (13%), Positives = 24/81 (29%), Gaps = 9/81 (11%)
Query: 84 HLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKR 143
E + V++G ++ + + G IP G ++ N + R
Sbjct: 84 QDPNAEAVLFVVEGELSLTLQGQ-----VHAMQPGGYAFIPPGADYKV---RNTTGQHTR 135
Query: 144 YF-IGEPVWTPHNRPADDMEC 163
+ I + P +
Sbjct: 136 FHWIRKHYQKVDGVPLPEAFV 156
>d1x82a_ b.82.1.7 (A:) Glucose-6-phosphate isomerase, GPI {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 190
Score = 37.4 bits (86), Expect = 3e-04
Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 84 HLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFT 132
H D E+ + L G G ++ D I + G ++ +P HR
Sbjct: 91 HAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTV 140
>d1rc6a_ b.82.1.11 (A:) Hypothetical protein YlbA {Escherichia coli
[TaxId: 562]}
Length = 253
Score = 37.1 bits (85), Expect = 6e-04
Identities = 13/57 (22%), Positives = 19/57 (33%), Gaps = 5/57 (8%)
Query: 75 EKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRF 131
S H E +L G G +++ + I V KGD I + A
Sbjct: 179 APGASHGYIETHVQEHGAYILSGQGVYNLDNN-----WIPVKKGDYIFMGAYSLQAG 230
Score = 33.6 bits (76), Expect = 0.007
Identities = 8/49 (16%), Positives = 14/49 (28%), Gaps = 5/49 (10%)
Query: 83 EHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRF 131
E V+ G+ K +++G + P G F
Sbjct: 68 FGGEGIETFLYVISGNITAKAEGK-----TFALSEGGYLYCPPGSLMTF 111
>d1dgwa_ b.82.1.2 (A:) Seed storage 7S protein {Jack bean (Canavalia
ensiformis), canavalin/vinculin [TaxId: 3823]}
Length = 178
Score = 36.1 bits (83), Expect = 8e-04
Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Query: 79 SFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYH 129
+ H + + LVL+G + + ++ +GD I I AG
Sbjct: 52 TLLLPHHSDSDLLVLVLEGQAILVLVNPDG-RDTYKLDQGDAIKIQAGTPF 101
>d2arca_ b.82.4.1 (A:) Regulatory protein AraC {Escherichia coli
[TaxId: 562]}
Length = 161
Score = 35.8 bits (82), Expect = 9e-04
Identities = 8/49 (16%), Positives = 16/49 (32%), Gaps = 5/49 (10%)
Query: 83 EHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRF 131
+ L + G G + + GD+++ P G H +
Sbjct: 33 PLGMKGYILNLTIRGQGVVKNQGR-----EFVCRPGDILLFPPGEIHHY 76
>d2f4pa1 b.82.1.9 (A:2-135) Hypothetical protein TM1010 {Thermotoga
maritima [TaxId: 2336]}
Length = 134
Score = 35.4 bits (81), Expect = 0.001
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 84 HLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRF 131
H H +I +V G G++ R K + KGD++ IP + H
Sbjct: 51 HSHPGGQILIVTRGKGFYQERGK----PARILKKGDVVEIPPNVVHWH 94
>d2pyta1 b.82.1.24 (A:100-227) Ethanolamine utilization protein EutQ
{Salmonella typhimurium [TaxId: 90371]}
Length = 128
Score = 34.5 bits (79), Expect = 0.002
Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Query: 86 HTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFT 132
+EI +VL+G + + + GD++ IP G F
Sbjct: 70 LNYDEIDMVLEGELHVRHEGE-----TMIAKAGDVMFIPKGSSIEFG 111
>d1uija1 b.82.1.2 (A:6-175) Seed storage 7S protein {Soybean
(Glycine max), beta-conglycinin beta subunit [TaxId:
3847]}
Length = 170
Score = 34.5 bits (79), Expect = 0.003
Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 73 YEEKLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYH 129
++ K + H + + VL G + + DD + GD IPAG +
Sbjct: 49 FQSKPNTILLPHHADADFLLFVLSGRAILTLVNN-DDRDSYNLHPGDAQRIPAGTTY 104
>g1dgw.1 b.82.1.2 (X:,Y:) Seed storage 7S protein {Jack bean
(Canavalia ensiformis), canavalin/vinculin [TaxId:
3823]}
Length = 168
Score = 34.6 bits (79), Expect = 0.003
Identities = 8/53 (15%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 79 SFYTEHLHTD-EEIRLVLDGSGYFDVRDKFDD-WIRIEVTKGDLIIIPAGIYH 129
+ + H ++ I + +G ++ +++GD+I+IP+
Sbjct: 47 ALFVPHYNSRATVILVANEGRAEVELVGLEQLRRYAATLSEGDIIVIPSSFPV 99
>d1sefa_ b.82.1.11 (A:) Hypothetical protein EF2996 {Enterococcus
faecalis [TaxId: 1351]}
Length = 250
Score = 34.7 bits (79), Expect = 0.003
Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 5/49 (10%)
Query: 83 EHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRF 131
H E ++ G G +++ ++ V KGD I + A +
Sbjct: 184 IETHVQEHGAYLISGQGMYNLDNE-----WYPVEKGDYIFMSAYVPQAA 227
Score = 30.1 bits (67), Expect = 0.12
Identities = 5/53 (9%), Positives = 11/53 (20%), Gaps = 5/53 (9%)
Query: 79 SFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRF 131
+ + V+DG + E+ G +
Sbjct: 61 QTTGFGGDGIQTLVYVIDGRLRVSDGQE-----THELEAGGYAYFTPEMKMYL 108
>d2et1a1 b.82.1.2 (A:1-201) Germin {Barley (Hordeum vulgare) [TaxId:
4513]}
Length = 201
Score = 34.1 bits (78), Expect = 0.004
Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Query: 84 HLHTD-EEIRLVLDGSGYFDVRDKFDD---WIRIEVTKGDLIIIPAGIYH 129
H+H EI +V+ G + D V G+ +IP G+ H
Sbjct: 88 HIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMH 137
>d1yhfa1 b.82.1.9 (A:1-112) Hypothetical protein SPy1581
{Streptococcus pyogenes [TaxId: 1314]}
Length = 112
Score = 33.5 bits (76), Expect = 0.004
Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 5/50 (10%)
Query: 83 EHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFT 132
H + + +L G + + V +G I++PAGI H
Sbjct: 52 RHSSPGDAMVTILSGLAEITIDQE-----TYRVAEGQTIVMPAGIPHALY 96
>d2phla1 b.82.1.2 (A:11-210) Seed storage 7S protein {French bean
(Phaseolus vulgaris), phaseolin [TaxId: 3885]}
Length = 200
Score = 33.7 bits (77), Expect = 0.006
Identities = 11/62 (17%), Positives = 19/62 (30%), Gaps = 5/62 (8%)
Query: 73 YEEKLKSFYTEHLHTDEEIRLVLDGSGYFDV-----RDKFDDWIRIEVTKGDLIIIPAGI 127
+ K ++ E + +V GS + R ++ D IPAG
Sbjct: 47 FRSKPETLLLPQQADAELLLVVRSGSAILVLVKPDDRREYFFLTSDNPIFSDHQKIPAGT 106
Query: 128 YH 129
Sbjct: 107 IF 108
>d1fxza2 b.82.1.2 (A:297-470) Seed storage 7S protein {Soybean
(Glycine max), proglycinin [TaxId: 3847]}
Length = 174
Score = 32.2 bits (73), Expect = 0.016
Identities = 9/53 (16%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Query: 79 SFYTEHLHTD-EEIRLVLDGSGYFD-VRDKFDDWIRIEVTKGDLIIIPAGIYH 129
+ + H + + I L+G V + E+ +G ++I+P
Sbjct: 53 AMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVV 105
>d1uika1 b.82.1.2 (A:148-350) Seed storage 7S protein {Soybean
(Glycine max), beta-conglycinin alpha prime subunit
[TaxId: 3847]}
Length = 203
Score = 32.2 bits (73), Expect = 0.018
Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 78 KSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINN 137
+ H + + ++L+G+ + + DD + GD + +PAG + + ++ +N
Sbjct: 50 NTLLLPHHADADYLIVILNGTAILTLVNN-DDRDSYNLQSGDALRVPAGTTY-YVVNPDN 107
Query: 138 YVKAKRYFIGEPVWTPHNRP 157
+ + PV P
Sbjct: 108 DENLRMITLAIPVNKPGRFE 127
>d1pmia_ b.82.1.3 (A:) Phosphomannose isomerase {Yeast (Candida
albicans) [TaxId: 5476]}
Length = 440
Score = 31.3 bits (70), Expect = 0.059
Identities = 9/45 (20%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Query: 90 EIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLD 134
I + +G G + DD + ++ G + + G T D
Sbjct: 381 SIVIATNGKGTIQITG--DDSTKQKIDTGYVFFVAPGSSIELTAD 423
>d1uika2 b.82.1.2 (A:351-535) Seed storage 7S protein {Soybean
(Glycine max), beta-conglycinin alpha prime subunit
[TaxId: 3847]}
Length = 185
Score = 30.0 bits (67), Expect = 0.11
Identities = 9/61 (14%), Positives = 23/61 (37%), Gaps = 15/61 (24%)
Query: 84 HLHTDE-EIRLVLDGSGYFDVRDKFDD--------------WIRIEVTKGDLIIIPAGIY 128
H ++ + ++ +G ++ + R E+++ D+ +IPAG
Sbjct: 58 HFNSKAIVVLVINEGEANIELVGIKEQQQRQQQEEQPLEVRKYRAELSEQDIFVIPAGYP 117
Query: 129 H 129
Sbjct: 118 V 118
>d1lr5a_ b.82.1.2 (A:) Auxin binding protein {Maize (Zea mays)
[TaxId: 4577]}
Length = 160
Score = 29.1 bits (64), Expect = 0.18
Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 4/54 (7%)
Query: 83 EHLHTDEEIRLVLDGSGYFDVRDKFDDWI----RIEVTKGDLIIIPAGIYHRFT 132
H H+ EE+ VL G G + + I + IP H+
Sbjct: 56 IHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVW 109
>d2phla2 b.82.1.2 (A:220-381) Seed storage 7S protein {French bean
(Phaseolus vulgaris), phaseolin [TaxId: 3885]}
Length = 162
Score = 29.1 bits (65), Expect = 0.20
Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 8/54 (14%)
Query: 84 HLHTD-EEIRLVLDGSGYFDV-------RDKFDDWIRIEVTKGDLIIIPAGIYH 129
H ++ I +V +G + ++ + R E++K D+ +IPA
Sbjct: 36 HYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFVIPAAYPV 89
>d1od5a2 b.82.1.2 (A:321-493) Seed storage 7S protein {Soybean
(Glycine max), glycinin A3B4 [TaxId: 3847]}
Length = 173
Score = 28.8 bits (64), Expect = 0.23
Identities = 9/48 (18%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 84 HLHTD-EEIRLVLDGSGYFDVRDKFDDW-IRIEVTKGDLIIIPAGIYH 129
H + + + V G G V + + E+ +G L+++P
Sbjct: 63 HWNLNANSVIYVTRGKGRVRVVNCQGNAVFDGELRRGQLLVVPQNFVV 110
>d1o5ua_ b.82.1.8 (A:) Hypothetical protein TM1112 {Thermotoga
maritima [TaxId: 2336]}
Length = 88
Score = 27.8 bits (62), Expect = 0.23
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Query: 86 HTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYF 145
+ E +L+G V +D + + KGDL+ P G R + V+ K Y
Sbjct: 34 YDTNETCYILEGK----VEVTTEDGKKYVIEKGDLVTFPKG--LRCRWKVLEPVR-KHYN 86
Query: 146 I 146
+
Sbjct: 87 L 87
>d1o4ta_ b.82.1.9 (A:) Hypothetical protein TM1287 {Thermotoga
maritima [TaxId: 2336]}
Length = 115
Score = 27.4 bits (60), Expect = 0.55
Identities = 13/51 (25%), Positives = 16/51 (31%), Gaps = 6/51 (11%)
Query: 83 EHLHTD-EEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFT 132
H H EI +L G G F K GD+ +G H
Sbjct: 54 LHKHEGEFEIYYILLGEGVFHDNGKDVPIKA-----GDVCFTDSGESHSIE 99
>d2bnma2 b.82.1.10 (A:77-198) Hydroxypropylphosphonic acid epoxidase
Fom4, C-terminal domain {Streptomyces wedmorensis
[TaxId: 43759]}
Length = 122
Score = 27.2 bits (60), Expect = 0.70
Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Query: 80 FYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFT 132
H E VL+G + DK + + G + + + H FT
Sbjct: 56 AKFNSGHAGNEFLFVLEGEIHMKWGDKENPK-EALLPTGASMFVEEHVPHAFT 107
>d1qwra_ b.82.1.3 (A:) Mannose-6-phosphate isomerase ManA {Bacillus
subtilis [TaxId: 1423]}
Length = 315
Score = 27.3 bits (60), Expect = 1.1
Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 10/112 (8%)
Query: 16 RLEHHRTPKEYLDLQTLNKLTGVEYFNVQDEVLTKLRKDRNYNYEDEITCSKDCLPNYEE 75
RL+ + +P+E L + +V + + + + + Y+
Sbjct: 198 RLDSNGSPRE-LHFAKA--VNAATVPHVDGYIDESTESRKGITIKTFVQGEYFSV--YKW 252
Query: 76 KLKSFYTEHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGI 127
+ I V++GSG DK + KGD I+PA +
Sbjct: 253 DINGEAEMAQDESFLICSVIEGSGLLKYEDK-----TCPLKKGDHFILPAQM 299
>d1ofla_ b.80.1.4 (A:) Chondroitinase B {Pedobacter heparinus
[TaxId: 984]}
Length = 481
Score = 26.8 bits (58), Expect = 1.9
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 118 GDLIIIPAGIYHRFTLDINN 137
G L+ I G Y L ++N
Sbjct: 19 GGLVQIADGTYKDVQLIVSN 38
>d1zx5a1 b.82.1.3 (A:1-299) Putative mannosephosphate isomerase
AF0035 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 299
Score = 26.2 bits (57), Expect = 2.2
Identities = 7/87 (8%), Positives = 20/87 (22%), Gaps = 6/87 (6%)
Query: 41 FNVQDEVLTKLRKDRNYNYEDEITCSKDCLPNYEEKLKSFYTEHLHTDEEIRLVLDGSGY 100
+ +VL + + + + + I +G
Sbjct: 200 WEKVKKVLNTKKVEEFEVKGKKGMAETENFGLEVVDVTGTAEIKTGGVMNILYAAEGYF- 258
Query: 101 FDVRDKFDDWIRIEVTKGDLIIIPAGI 127
++ +G ++PA
Sbjct: 259 -----ILRGKETADLHRGYSCLVPAST 280
Score = 24.6 bits (53), Expect = 6.9
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 112 RIEVTKGDLIIIPAGIYH 129
E T D +I GI H
Sbjct: 158 TFETTPYDTFVIRPGIPH 175
>d1fxza1 b.82.1.2 (A:10-248) Seed storage 7S protein {Soybean
(Glycine max), proglycinin [TaxId: 3847]}
Length = 239
Score = 25.2 bits (55), Expect = 4.1
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 112 RIEVTKGDLIIIPAGIYH 129
+GDLI +P G+
Sbjct: 105 IYNFREGDLIAVPTGVAW 122
>d2o1qa1 b.82.1.21 (A:1-144) Putative acetyl/propionyl-CoA
carboxylase subunit alpha Mpe_A3659 {Rubrivivax
gelatinosus [TaxId: 28068]}
Length = 144
Score = 25.0 bits (54), Expect = 4.3
Identities = 7/49 (14%), Positives = 9/49 (18%), Gaps = 3/49 (6%)
Query: 84 HLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRFT 132
H+H + G I A H T
Sbjct: 59 HVHVGPGEYFLTKGKMDVRGGKAAGGDTAIA---PGYGYESANARHDKT 104
>d1eyba_ b.82.1.4 (A:) Homogentisate dioxygenase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 439
Score = 25.2 bits (55), Expect = 5.2
Identities = 3/23 (13%), Positives = 10/23 (43%)
Query: 112 RIEVTKGDLIIIPAGIYHRFTLD 134
++ V ++ +I G+ +
Sbjct: 170 KMLVQPNEICVIQRGMRFSIDVF 192
>d1vj2a_ b.82.1.10 (A:) Hypothetical protein TM1459 {Thermotoga
maritima [TaxId: 2336]}
Length = 114
Score = 24.0 bits (51), Expect = 7.0
Identities = 10/49 (20%), Positives = 12/49 (24%), Gaps = 5/49 (10%)
Query: 83 EHLHTDEEIRLVLDGSGYFDVRDKFDDWIRIEVTKGDLIIIPAGIYHRF 131
H H E VL G + G I + H F
Sbjct: 51 RHSHPWEHEIFVLKGKLTVLKEQGEETVEE-----GFYIFVEPNEIHGF 94
>d3dl3a1 b.82.2.13 (A:5-100) Tellurite resistance protein B, TehB
{Vibrio fischeri [TaxId: 668]}
Length = 96
Score = 23.5 bits (51), Expect = 8.5
Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Query: 110 WIRIEVTKGDLIIIPAGIYHRFTLDINNYVKAKRYFIGEP-VWTPHN-RPADDMECRLEY 167
+ +I V +G + +I + A ++ P W H +DD + + +
Sbjct: 35 FGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYW--HRIELSDDAQFNINF 92
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.139 0.425
Gapped
Lambda K H
0.267 0.0551 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 760,981
Number of extensions: 38089
Number of successful extensions: 156
Number of sequences better than 10.0: 1
Number of HSP's gapped: 136
Number of HSP's successfully gapped: 54
Length of query: 178
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 98
Effective length of database: 1,309,196
Effective search space: 128301208
Effective search space used: 128301208
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.4 bits)