Your job contains 1 sequence.
>psy8405
MALLKMELLGIGPFPKKRGRKRKHFSVVAEQKDLSQQSNENNQGLKSGDHENIHNVNTSK
IGIKTEENPTLDGGNIKIPKKRGRKRKYPLANLIQPTSNHTPDGTVVKKKRGRKRKYPLP
TVEPEEVAYKGSQHNNSVNDIVVKEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTW
EGSDEADLLPAEICKRKYPQPLIRFFEQHLVFPSENNASKQSSSQ
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8405
(225 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|G3V1X9 - symbol:CBX5 "Chromobox protein homolog... 150 9.4e-11 1
MGI|MGI:109372 - symbol:Cbx5 "chromobox 5" species:10090 ... 150 9.4e-11 1
RGD|1306619 - symbol:Cbx5 "chromobox homolog 5" species:1... 150 9.4e-11 1
UNIPROTKB|F2Z4J7 - symbol:CBX5 "Uncharacterized protein" ... 148 1.5e-10 1
UNIPROTKB|P45973 - symbol:CBX5 "Chromobox protein homolog... 148 1.5e-10 1
UNIPROTKB|F2Z5T3 - symbol:LOC100519426 "Uncharacterized p... 148 1.5e-10 1
ZFIN|ZDB-GENE-030131-1158 - symbol:cbx3a "chromobox homol... 148 1.5e-10 1
UNIPROTKB|E2QYK6 - symbol:CBX5 "Uncharacterized protein" ... 145 3.2e-10 1
UNIPROTKB|I3LQ28 - symbol:I3LQ28 "Uncharacterized protein... 142 6.6e-10 1
UNIPROTKB|G5E6N7 - symbol:CBX1 "Uncharacterized protein" ... 139 1.4e-09 1
UNIPROTKB|E2QT97 - symbol:CBX1 "Uncharacterized protein" ... 139 1.4e-09 1
UNIPROTKB|P83916 - symbol:CBX1 "Chromobox protein homolog... 139 1.4e-09 1
UNIPROTKB|F1RWH1 - symbol:CBX1 "Uncharacterized protein" ... 139 1.4e-09 1
MGI|MGI:105369 - symbol:Cbx1 "chromobox 1" species:10090 ... 139 1.4e-09 1
RGD|1310714 - symbol:Cbx1 "chromobox homolog 1" species:1... 139 1.4e-09 1
UNIPROTKB|O93480 - symbol:CBX1 "Uncharacterized protein" ... 137 2.2e-09 1
ZFIN|ZDB-GENE-030131-4945 - symbol:cbx1a "chromobox homol... 139 3.8e-09 1
FB|FBgn0030082 - symbol:HP1b "Heterochromatin Protein 1b"... 139 8.4e-09 1
UNIPROTKB|J3KS05 - symbol:CBX1 "Chromobox protein homolog... 130 1.2e-08 1
UNIPROTKB|H9L191 - symbol:CBX1 "Uncharacterized protein" ... 123 6.8e-08 1
ZFIN|ZDB-GENE-040625-68 - symbol:cbx1b "chromobox homolog... 132 7.6e-08 1
ZFIN|ZDB-GENE-030131-5553 - symbol:cbx5 "chromobox homolo... 131 1.1e-07 1
FB|FBgn0031613 - symbol:HP6 "Heterochromatin protein 6" s... 120 1.4e-07 1
FB|FBgn0003607 - symbol:Su(var)205 "Suppressor of variega... 123 2.0e-07 2
UNIPROTKB|O93481 - symbol:CBX3 "Uncharacterized protein" ... 119 2.0e-06 1
UNIPROTKB|F1N1S3 - symbol:CBX3 "Uncharacterized protein" ... 120 2.3e-06 1
UNIPROTKB|E2QXC6 - symbol:CBX3 "Uncharacterized protein" ... 119 3.5e-06 1
UNIPROTKB|Q13185 - symbol:CBX3 "Chromobox protein homolog... 119 3.5e-06 1
UNIPROTKB|F1ST98 - symbol:CBX3 "Uncharacterized protein" ... 119 3.5e-06 1
UNIPROTKB|Q5R6X7 - symbol:CBX3 "Chromobox protein homolog... 119 3.5e-06 1
UNIPROTKB|Q6E6J8 - symbol:Q6E6J8 "Heterochromatin protein... 119 3.5e-06 1
UNIPROTKB|Q5RJK5 - symbol:Cbx3 "Chromobox homolog 3 (HP1 ... 119 3.5e-06 1
UNIPROTKB|F1ND82 - symbol:CBX3 "Uncharacterized protein" ... 119 3.7e-06 1
RGD|2322491 - symbol:LOC100360260 "chromobox homolog 3-li... 118 5.3e-06 1
UNIPROTKB|B5MD17 - symbol:CBX1 "Chromobox protein homolog... 113 1.3e-05 1
UNIPROTKB|F1P737 - symbol:F1P737 "Uncharacterized protein... 110 4.4e-05 1
FB|FBgn0039019 - symbol:HP1c "Heterochromatin Protein 1c"... 110 0.00018 1
>UNIPROTKB|G3V1X9 [details] [associations]
symbol:CBX5 "Chromobox protein homolog 5" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR008251 InterPro:IPR000953
Pfam:PF01393 PROSITE:PS50013 SMART:SM00298 SMART:SM00300
Pfam:PF00385 GO:GO:0005634 GO:GO:0005737 EMBL:CH471054
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR017984
InterPro:IPR023780 InterPro:IPR023779 PRINTS:PR00504
PROSITE:PS00598 UniGene:Hs.349283 HGNC:HGNC:1555 ChiTaRS:CBX5
EMBL:AC078778 ProteinModelPortal:G3V1X9 SMR:G3V1X9
Ensembl:ENST00000550489 ArrayExpress:G3V1X9 Bgee:G3V1X9
Uniprot:G3V1X9
Length = 190
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 39/106 (36%), Positives = 60/106 (56%)
Query: 123 EPEEVAYKGSQHNNSVNDIVVKEKL-LNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWE 181
E E + S +NS +DI K+K ND+ G +R L E+IIGAT G +L+ W+
Sbjct: 83 EKSESNKRKSNFSNSADDIKSKKKRESNDIARGFERGLEPEKIIGATDSCGDLMFLMKWK 142
Query: 182 GSDEADLLPAEICKRKYPQPLIRFFEQHLV---FPSE-NNASKQSS 223
+DEADL+ A+ K PQ +I F+E+ L +P + N K+++
Sbjct: 143 DTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAENKEKETA 188
>MGI|MGI:109372 [details] [associations]
symbol:Cbx5 "chromobox 5" species:10090 "Mus musculus"
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0000776
"kinetochore" evidence=IDA] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005720 "nuclear heterochromatin" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO;IDA] [GO:0010369 "chromocenter"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0035064
"methylated histone residue binding" evidence=ISO] [GO:0035097
"histone methyltransferase complex" evidence=IDA] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0042826
"histone deacetylase binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0070491 "repressing transcription factor binding" evidence=IPI]
InterPro:IPR008251 InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013
SMART:SM00298 SMART:SM00300 MGI:MGI:109372 Pfam:PF00385
GO:GO:0005737 GO:GO:0017053 GO:GO:0045892 GO:GO:0005730
GO:GO:0000776 GO:GO:0016605 GO:GO:0005720 GO:GO:0003682
GO:GO:0035064 InterPro:IPR016197 SUPFAM:SSF54160 GO:GO:0010369
GO:GO:0035097 HOGENOM:HOG000220852 HOVERGEN:HBG000400
InterPro:IPR017984 InterPro:IPR023780 InterPro:IPR023779
PRINTS:PR00504 PROSITE:PS00598 GeneTree:ENSGT00510000046310
CTD:23468 eggNOG:NOG132879 KO:K11587 OMA:DKHNTWE OrthoDB:EOG4NVZMP
ChiTaRS:CBX5 GO:GO:0000118 EMBL:X99641 EMBL:AF216290 EMBL:AK008792
EMBL:AK018349 EMBL:AK030366 EMBL:AK030442 EMBL:AK032975
EMBL:AK019198 EMBL:BC004707 IPI:IPI00123755 RefSeq:NP_001070257.1
RefSeq:NP_001103686.1 RefSeq:NP_031652.1 UniGene:Mm.262059
ProteinModelPortal:Q61686 SMR:Q61686 DIP:DIP-28137N IntAct:Q61686
MINT:MINT-191222 STRING:Q61686 PhosphoSite:Q61686 PaxDb:Q61686
PRIDE:Q61686 Ensembl:ENSMUST00000108813 Ensembl:ENSMUST00000118152
Ensembl:ENSMUST00000122182 GeneID:12419 KEGG:mmu:12419
UCSC:uc007xxl.1 InParanoid:Q61686 NextBio:281216 Bgee:Q61686
CleanEx:MM_CBX5 Genevestigator:Q61686 GermOnline:ENSMUSG00000009575
Uniprot:Q61686
Length = 191
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 40/107 (37%), Positives = 60/107 (56%)
Query: 123 EPEEVAYKGSQHNNSVNDIVVKEKL--LNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTW 180
E E + S +NS +DI K+K ND+ G +R L E+IIGAT G +L+ W
Sbjct: 83 EKSEGNKRKSSFSNSADDIKSKKKREQSNDIARGFERGLEPEKIIGATDSCGDLMFLMKW 142
Query: 181 EGSDEADLLPAEICKRKYPQPLIRFFEQHLV---FPSE-NNASKQSS 223
+ +DEADL+ A+ K PQ +I F+E+ L +P + N K+S+
Sbjct: 143 KDTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAENKEKESA 189
>RGD|1306619 [details] [associations]
symbol:Cbx5 "chromobox homolog 5" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0000792 "heterochromatin" evidence=ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005720 "nuclear heterochromatin" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0010369 "chromocenter" evidence=IEA;ISO]
[GO:0016605 "PML body" evidence=IEA;ISO] [GO:0017053
"transcriptional repressor complex" evidence=IEA;ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0030674 "protein binding,
bridging" evidence=IEA;ISO] [GO:0035064 "methylated histone residue
binding" evidence=IEA;ISO] [GO:0035097 "histone methyltransferase
complex" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0070491
"repressing transcription factor binding" evidence=IEA;ISO]
InterPro:IPR008251 InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013
SMART:SM00298 SMART:SM00300 Pfam:PF00385 RGD:1306619 GO:GO:0005737
GO:GO:0017053 GO:GO:0045892 GO:GO:0005730 GO:GO:0000776
GO:GO:0016605 GO:GO:0005720 GO:GO:0003682 InterPro:IPR016197
SUPFAM:SSF54160 GO:GO:0010369 EMBL:CH474035 GO:GO:0035097
HOGENOM:HOG000220852 HOVERGEN:HBG000400 InterPro:IPR017984
InterPro:IPR023780 InterPro:IPR023779 PRINTS:PR00504
PROSITE:PS00598 GeneTree:ENSGT00510000046310 CTD:23468
eggNOG:NOG132879 KO:K11587 OMA:DKHNTWE OrthoDB:EOG4NVZMP
GO:GO:0000118 EMBL:BC166908 EMBL:BC168739 IPI:IPI00214953
RefSeq:NP_001100267.1 UniGene:Rn.101856 SMR:B2RYU7 STRING:B2RYU7
Ensembl:ENSRNOT00000055289 GeneID:300266 KEGG:rno:300266
UCSC:RGD:1306619 NextBio:646680 Genevestigator:B2RYU7
Uniprot:B2RYU7
Length = 191
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 40/107 (37%), Positives = 60/107 (56%)
Query: 123 EPEEVAYKGSQHNNSVNDIVVKEKL--LNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTW 180
E E + S +NS +DI K+K ND+ G +R L E+IIGAT G +L+ W
Sbjct: 83 EKSEGNKRKSSFSNSADDIKSKKKREQSNDIARGFERGLEPEKIIGATDSCGDLMFLMKW 142
Query: 181 EGSDEADLLPAEICKRKYPQPLIRFFEQHLV---FPSE-NNASKQSS 223
+ +DEADL+ A+ K PQ +I F+E+ L +P + N K+S+
Sbjct: 143 KDTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAENKEKESA 189
>UNIPROTKB|F2Z4J7 [details] [associations]
symbol:CBX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070491 "repressing transcription factor binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=IEA] [GO:0035064 "methylated histone residue
binding" evidence=IEA] [GO:0030674 "protein binding, bridging"
evidence=IEA] [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0010369
"chromocenter" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005720 "nuclear
heterochromatin" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0000118
"histone deacetylase complex" evidence=IEA] InterPro:IPR008251
InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013 SMART:SM00298
SMART:SM00300 Pfam:PF00385 GO:GO:0005737 GO:GO:0017053
GO:GO:0045892 GO:GO:0005730 GO:GO:0000776 GO:GO:0016605
GO:GO:0005720 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
GO:GO:0010369 GO:GO:0035097 InterPro:IPR017984 InterPro:IPR023780
InterPro:IPR023779 PRINTS:PR00504 PROSITE:PS00598
GeneTree:ENSGT00510000046310 CTD:23468 KO:K11587 OMA:DKHNTWE
GO:GO:0000118 EMBL:DAAA02012833 IPI:IPI00691753
RefSeq:NP_001180142.1 UniGene:Bt.44024 ProteinModelPortal:F2Z4J7
SMR:F2Z4J7 PRIDE:F2Z4J7 Ensembl:ENSBTAT00000008198 GeneID:538885
KEGG:bta:538885 NextBio:20877643 Uniprot:F2Z4J7
Length = 191
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 39/107 (36%), Positives = 60/107 (56%)
Query: 123 EPEEVAYKGSQHNNSVNDIVVKEKL--LNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTW 180
E E + S +NS +DI K+K ND+ G +R L E+IIGAT G +L+ W
Sbjct: 83 EKSESNKRKSNFSNSADDIKSKKKREQSNDIARGFERGLEPEKIIGATDSCGDLMFLMKW 142
Query: 181 EGSDEADLLPAEICKRKYPQPLIRFFEQHLV---FPSE-NNASKQSS 223
+ +DEADL+ A+ K PQ +I F+E+ L +P + N K+++
Sbjct: 143 KDTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAENKEKETA 189
>UNIPROTKB|P45973 [details] [associations]
symbol:CBX5 "Chromobox protein homolog 5" species:9606
"Homo sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0010369 "chromocenter" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005720 "nuclear heterochromatin" evidence=TAS] [GO:0005635
"nuclear envelope" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007596 "blood coagulation" evidence=TAS]
[GO:0031618 "nuclear centromeric heterochromatin" evidence=NAS]
[GO:0000118 "histone deacetylase complex" evidence=ISS] [GO:0017053
"transcriptional repressor complex" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0016605 "PML body" evidence=IMP]
[GO:0070491 "repressing transcription factor binding" evidence=ISS]
[GO:0030674 "protein binding, bridging" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_604 InterPro:IPR008251
InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013 SMART:SM00298
SMART:SM00300 Pfam:PF00385 GO:GO:0005737 GO:GO:0005635
GO:GO:0017053 GO:GO:0045892 GO:GO:0019048 GO:GO:0005730
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0000776 GO:GO:0007596
EMBL:CH471054 GO:GO:0003682 GO:GO:0030674 GO:GO:0035064
InterPro:IPR016197 SUPFAM:SSF54160 GO:GO:0010369 GO:GO:0031618
GO:GO:0035097 HOGENOM:HOG000220852 HOVERGEN:HBG000400
InterPro:IPR017984 InterPro:IPR023780 InterPro:IPR023779
PRINTS:PR00504 PROSITE:PS00598 EMBL:S62077 EMBL:L07515
EMBL:AK313506 EMBL:BC006821 EMBL:U26311 IPI:IPI00024662 PIR:G01808
RefSeq:NP_001120793.1 RefSeq:NP_001120794.1 RefSeq:NP_036249.1
UniGene:Hs.349283 PDB:3FDT PDB:3I3C PDBsum:3FDT PDBsum:3I3C
ProteinModelPortal:P45973 SMR:P45973 DIP:DIP-5986N IntAct:P45973
MINT:MINT-1178082 STRING:P45973 PhosphoSite:P45973 DMDM:1170338
PaxDb:P45973 PeptideAtlas:P45973 PRIDE:P45973 DNASU:23468
Ensembl:ENST00000209875 Ensembl:ENST00000439541
Ensembl:ENST00000550411 GeneID:23468 KEGG:hsa:23468 UCSC:uc001sfh.4
CTD:23468 GeneCards:GC12M054624 HGNC:HGNC:1555 HPA:CAB017548
HPA:HPA016699 MIM:604478 neXtProt:NX_P45973 PharmGKB:PA26130
eggNOG:NOG132879 InParanoid:P45973 KO:K11587 OMA:DKHNTWE
OrthoDB:EOG4NVZMP PhylomeDB:P45973 ChiTaRS:CBX5
EvolutionaryTrace:P45973 GenomeRNAi:23468 NextBio:45793
ArrayExpress:P45973 Bgee:P45973 CleanEx:HS_CBX5
Genevestigator:P45973 GermOnline:ENSG00000094916 GO:GO:0000118
GO:GO:0070491 Uniprot:P45973
Length = 191
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 39/107 (36%), Positives = 60/107 (56%)
Query: 123 EPEEVAYKGSQHNNSVNDIVVKEKL--LNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTW 180
E E + S +NS +DI K+K ND+ G +R L E+IIGAT G +L+ W
Sbjct: 83 EKSESNKRKSNFSNSADDIKSKKKREQSNDIARGFERGLEPEKIIGATDSCGDLMFLMKW 142
Query: 181 EGSDEADLLPAEICKRKYPQPLIRFFEQHLV---FPSE-NNASKQSS 223
+ +DEADL+ A+ K PQ +I F+E+ L +P + N K+++
Sbjct: 143 KDTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAENKEKETA 189
>UNIPROTKB|F2Z5T3 [details] [associations]
symbol:LOC100519426 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR008251
InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013 SMART:SM00298
SMART:SM00300 Pfam:PF00385 GO:GO:0005634 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR017984 InterPro:IPR023780
InterPro:IPR023779 PRINTS:PR00504 PROSITE:PS00598
GeneTree:ENSGT00510000046310 KO:K11587 OMA:DKHNTWE EMBL:CU633419
RefSeq:XP_003126248.1 RefSeq:XP_003126249.1
ProteinModelPortal:F2Z5T3 SMR:F2Z5T3 PRIDE:F2Z5T3
Ensembl:ENSSSCT00000000303 GeneID:100519426 KEGG:ssc:100519426
Uniprot:F2Z5T3
Length = 191
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 39/107 (36%), Positives = 60/107 (56%)
Query: 123 EPEEVAYKGSQHNNSVNDIVVKEKL--LNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTW 180
E E + S +NS +DI K+K ND+ G +R L E+IIGAT G +L+ W
Sbjct: 83 EKSESNKRKSNFSNSADDIKSKKKREQSNDIARGFERGLEPEKIIGATDSCGDLMFLMKW 142
Query: 181 EGSDEADLLPAEICKRKYPQPLIRFFEQHLV---FPSE-NNASKQSS 223
+ +DEADL+ A+ K PQ +I F+E+ L +P + N K+++
Sbjct: 143 KDTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAENKEKETA 189
>ZFIN|ZDB-GENE-030131-1158 [details] [associations]
symbol:cbx3a "chromobox homolog 3a (HP1 gamma
homolog, Drosophila)" species:7955 "Danio rerio" [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR008251 InterPro:IPR000953
Pfam:PF01393 PROSITE:PS50013 SMART:SM00298 SMART:SM00300
Pfam:PF00385 ZFIN:ZDB-GENE-030131-1158 GO:GO:0005634
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR017984
InterPro:IPR023780 InterPro:IPR023779 PRINTS:PR00504
PROSITE:PS00598 GeneTree:ENSGT00510000046310 EMBL:CABZ01083875
IPI:IPI00994289 Ensembl:ENSDART00000130423 Bgee:F1R193
Uniprot:F1R193
Length = 177
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 36/93 (38%), Positives = 49/93 (52%)
Query: 123 EPEEVAYKGSQHNNSVNDIVVKEKL-LNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWE 181
+PE V K S + K K ++D G RNL E IIGAT G +L+ W+
Sbjct: 78 KPEAVKRKSSTDEPETEESKAKRKKEMSDKPRGFARNLEPERIIGATDSSGELMFLMKWK 137
Query: 182 GSDEADLLPAEICKRKYPQPLIRFFEQHLVFPS 214
SDEADL+PA + PQ +I F+E+ L + S
Sbjct: 138 DSDEADLVPAREANTRCPQIVIAFYEERLTWHS 170
>UNIPROTKB|E2QYK6 [details] [associations]
symbol:CBX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070491 "repressing transcription factor
binding" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0010369 "chromocenter" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005720 "nuclear heterochromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR008251 InterPro:IPR000953 Pfam:PF01393
PROSITE:PS50013 SMART:SM00298 SMART:SM00300 Pfam:PF00385
GO:GO:0005737 GO:GO:0017053 GO:GO:0045892 GO:GO:0005730
GO:GO:0000776 GO:GO:0016605 GO:GO:0005720 GO:GO:0003682
InterPro:IPR016197 SUPFAM:SSF54160 GO:GO:0010369 GO:GO:0035097
InterPro:IPR017984 InterPro:IPR023780 InterPro:IPR023779
PRINTS:PR00504 PROSITE:PS00598 GeneTree:ENSGT00510000046310
CTD:23468 KO:K11587 OMA:DKHNTWE GO:GO:0000118 EMBL:AAEX03014967
RefSeq:XP_003433614.1 RefSeq:XP_003433615.1 RefSeq:XP_534787.3
Ensembl:ENSCAFT00000010645 GeneID:477593 KEGG:cfa:477593
NextBio:20853044 Uniprot:E2QYK6
Length = 191
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 38/107 (35%), Positives = 60/107 (56%)
Query: 123 EPEEVAYKGSQHNNSVNDIVVKEKL--LNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTW 180
E E + S +N+ +DI K+K ND+ G +R L E+IIGAT G +L+ W
Sbjct: 83 EKSESNKRKSNFSNNADDIKSKKKREQSNDIARGFERGLEPEKIIGATDSCGDLMFLMKW 142
Query: 181 EGSDEADLLPAEICKRKYPQPLIRFFEQHLV---FPSE-NNASKQSS 223
+ +DEADL+ A+ K PQ +I F+E+ L +P + N K+++
Sbjct: 143 KDTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAENKEKETA 189
>UNIPROTKB|I3LQ28 [details] [associations]
symbol:I3LQ28 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR008251
InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013 SMART:SM00298
SMART:SM00300 Pfam:PF00385 GO:GO:0005634 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR017984 InterPro:IPR023780
InterPro:IPR023779 PRINTS:PR00504 PROSITE:PS00598
GeneTree:ENSGT00510000046310 EMBL:CU694683
Ensembl:ENSSSCT00000023390 OMA:NDKPREK Uniprot:I3LQ28
Length = 190
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 39/107 (36%), Positives = 60/107 (56%)
Query: 123 EPEEVAYKGSQHNNSVNDIVVKEKL--LNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTW 180
E E + S +NS +DI K+K ND+ G +R P E+IIGAT G +L+ W
Sbjct: 83 EKSESNKRKSNFSNSADDIKSKKKREQSNDIARGFERGEP-EKIIGATDSCGDLMFLMKW 141
Query: 181 EGSDEADLLPAEICKRKYPQPLIRFFEQHLV---FPSE-NNASKQSS 223
+ +DEADL+ A+ K PQ +I F+E+ L +P + N K+++
Sbjct: 142 KDTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAENKEKETA 188
>UNIPROTKB|G5E6N7 [details] [associations]
symbol:CBX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0001940 "male pronucleus" evidence=IEA]
[GO:0001939 "female pronucleus" evidence=IEA] InterPro:IPR008251
InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013 SMART:SM00298
SMART:SM00300 Pfam:PF00385 GO:GO:0045892 GO:GO:0005819
GO:GO:0005721 GO:GO:0001939 InterPro:IPR016197 SUPFAM:SSF54160
GO:GO:0010369 CTD:10951 KO:K11585 OMA:KSAQEGK GO:GO:0001940
InterPro:IPR017984 InterPro:IPR023780 InterPro:IPR023779
PRINTS:PR00504 PROSITE:PS00598 GeneTree:ENSGT00510000046310
EMBL:DAAA02049074 RefSeq:NP_001193344.1 UniGene:Bt.110477
UniGene:Bt.62437 ProteinModelPortal:G5E6N7 SMR:G5E6N7 PRIDE:G5E6N7
Ensembl:ENSBTAT00000003835 GeneID:616506 KEGG:bta:616506
NextBio:20900161 Uniprot:G5E6N7
Length = 185
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 33/84 (39%), Positives = 48/84 (57%)
Query: 144 KEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLI 203
K+K ++ G R L E IIGAT G +L+ W+ SDEADL+PA+ K PQ +I
Sbjct: 102 KKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVI 161
Query: 204 RFFEQHLV---FPSENNASKQSSS 224
F+E+ L +PSE++ K +
Sbjct: 162 SFYEERLTWHSYPSEDDDKKDDKN 185
>UNIPROTKB|E2QT97 [details] [associations]
symbol:CBX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0010369 "chromocenter" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0001940 "male pronucleus" evidence=IEA]
[GO:0001939 "female pronucleus" evidence=IEA] InterPro:IPR008251
InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013 SMART:SM00298
SMART:SM00300 Pfam:PF00385 GO:GO:0045892 GO:GO:0005819
GO:GO:0005721 GO:GO:0001939 InterPro:IPR016197 SUPFAM:SSF54160
GO:GO:0010369 CTD:10951 KO:K11585 OMA:KSAQEGK GO:GO:0001940
InterPro:IPR017984 InterPro:IPR023780 InterPro:IPR023779
PRINTS:PR00504 PROSITE:PS00598 GeneTree:ENSGT00510000046310
EMBL:AAEX03006509 RefSeq:XP_548171.1 SMR:E2QT97
Ensembl:ENSCAFT00000026643 GeneID:491051 KEGG:cfa:491051
NextBio:20863952 Uniprot:E2QT97
Length = 185
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 33/84 (39%), Positives = 48/84 (57%)
Query: 144 KEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLI 203
K+K ++ G R L E IIGAT G +L+ W+ SDEADL+PA+ K PQ +I
Sbjct: 102 KKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVI 161
Query: 204 RFFEQHLV---FPSENNASKQSSS 224
F+E+ L +PSE++ K +
Sbjct: 162 SFYEERLTWHSYPSEDDDKKDDKN 185
>UNIPROTKB|P83916 [details] [associations]
symbol:CBX1 "Chromobox protein homolog 1" species:9606
"Homo sapiens" [GO:0001939 "female pronucleus" evidence=IEA]
[GO:0001940 "male pronucleus" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=IEA] [GO:0010369
"chromocenter" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0000775
"chromosome, centromeric region" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0003682 "chromatin binding" evidence=TAS] [GO:0005720 "nuclear
heterochromatin" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] InterPro:IPR008251 InterPro:IPR000953 Pfam:PF01393
PROSITE:PS50013 SMART:SM00298 SMART:SM00300 Pfam:PF00385
GO:GO:0045892 GO:GO:0005654 GO:GO:0000775 GO:GO:0005819
GO:GO:0005720 GO:GO:0003682 GO:GO:0005721 GO:GO:0001939
InterPro:IPR016197 SUPFAM:SSF54160 GO:GO:0010369 EMBL:U35451
EMBL:BC002609 EMBL:BC021302 IPI:IPI00878669 PIR:G02080
RefSeq:NP_001120700.1 RefSeq:NP_006798.1 UniGene:Hs.77254 PDB:2FMM
PDB:3F2U PDB:3Q6S PDBsum:2FMM PDBsum:3F2U PDBsum:3Q6S
ProteinModelPortal:P83916 SMR:P83916 DIP:DIP-28135N DIP:DIP-5982N
IntAct:P83916 MINT:MINT-1378005 STRING:P83916 PhosphoSite:P83916
DMDM:48428808 PaxDb:P83916 PeptideAtlas:P83916 PRIDE:P83916
DNASU:10951 Ensembl:ENST00000225603 Ensembl:ENST00000393408
GeneID:10951 KEGG:hsa:10951 UCSC:uc002ind.4 CTD:10951
GeneCards:GC17M046147 HGNC:HGNC:1551 HPA:CAB012265 MIM:604511
neXtProt:NX_P83916 PharmGKB:PA26126 eggNOG:NOG264487
HOGENOM:HOG000220852 HOVERGEN:HBG000400 InParanoid:P83916 KO:K11585
OMA:KSAQEGK OrthoDB:EOG4DBTG1 PhylomeDB:P83916 ChEMBL:CHEMBL1741193
ChiTaRS:CBX1 EvolutionaryTrace:P83916 GenomeRNAi:10951
NextBio:41609 ArrayExpress:P83916 Bgee:P83916 CleanEx:HS_CBX1
Genevestigator:P83916 GermOnline:ENSG00000108468 GO:GO:0001940
InterPro:IPR017984 InterPro:IPR023780 InterPro:IPR023779
PRINTS:PR00504 PROSITE:PS00598 Uniprot:P83916
Length = 185
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 33/84 (39%), Positives = 48/84 (57%)
Query: 144 KEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLI 203
K+K ++ G R L E IIGAT G +L+ W+ SDEADL+PA+ K PQ +I
Sbjct: 102 KKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVI 161
Query: 204 RFFEQHLV---FPSENNASKQSSS 224
F+E+ L +PSE++ K +
Sbjct: 162 SFYEERLTWHSYPSEDDDKKDDKN 185
>UNIPROTKB|F1RWH1 [details] [associations]
symbol:CBX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0001940 "male pronucleus" evidence=IEA]
[GO:0001939 "female pronucleus" evidence=IEA] InterPro:IPR008251
InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013 SMART:SM00298
SMART:SM00300 Pfam:PF00385 GO:GO:0045892 GO:GO:0005819
GO:GO:0005721 GO:GO:0001939 InterPro:IPR016197 SUPFAM:SSF54160
GO:GO:0010369 KO:K11585 OMA:KSAQEGK GO:GO:0001940
InterPro:IPR017984 InterPro:IPR023780 InterPro:IPR023779
PRINTS:PR00504 PROSITE:PS00598 GeneTree:ENSGT00510000046310
EMBL:FP016123 RefSeq:XP_003131586.1 UniGene:Ssc.27174
ProteinModelPortal:F1RWH1 SMR:F1RWH1 PRIDE:F1RWH1
Ensembl:ENSSSCT00000019083 GeneID:100520403 KEGG:ssc:100520403
Uniprot:F1RWH1
Length = 185
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 33/84 (39%), Positives = 48/84 (57%)
Query: 144 KEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLI 203
K+K ++ G R L E IIGAT G +L+ W+ SDEADL+PA+ K PQ +I
Sbjct: 102 KKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVI 161
Query: 204 RFFEQHLV---FPSENNASKQSSS 224
F+E+ L +PSE++ K +
Sbjct: 162 SFYEERLTWHSYPSEDDDKKDDKN 185
>MGI|MGI:105369 [details] [associations]
symbol:Cbx1 "chromobox 1" species:10090 "Mus musculus"
[GO:0000775 "chromosome, centromeric region" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO;IDA] [GO:0001939 "female
pronucleus" evidence=IDA] [GO:0001940 "male pronucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0005819 "spindle" evidence=ISO]
[GO:0010369 "chromocenter" evidence=IDA] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] InterPro:IPR008251 InterPro:IPR000953
Pfam:PF01393 PROSITE:PS50013 SMART:SM00298 SMART:SM00300
MGI:MGI:105369 Pfam:PF00385 GO:GO:0045892 GO:GO:0005819
GO:GO:0005721 GO:GO:0001939 InterPro:IPR016197 SUPFAM:SSF54160
GO:GO:0010369 PDB:1S4Z PDBsum:1S4Z CTD:10951 eggNOG:NOG264487
HOGENOM:HOG000220852 HOVERGEN:HBG000400 KO:K11585 OMA:KSAQEGK
OrthoDB:EOG4DBTG1 ChiTaRS:CBX1 GO:GO:0001940 InterPro:IPR017984
InterPro:IPR023780 InterPro:IPR023779 PRINTS:PR00504
PROSITE:PS00598 EMBL:X56690 EMBL:AK014215 IPI:IPI00129466
PIR:S26847 RefSeq:NP_031648.1 UniGene:Mm.29055 PDB:1AP0 PDB:1DZ1
PDB:1GUW PDBsum:1AP0 PDBsum:1DZ1 PDBsum:1GUW
ProteinModelPortal:P83917 SMR:P83917 IntAct:P83917 MINT:MINT-191134
STRING:P83917 PhosphoSite:P83917 REPRODUCTION-2DPAGE:IPI00129466
PaxDb:P83917 PRIDE:P83917 Ensembl:ENSMUST00000093943 GeneID:12412
KEGG:mmu:12412 GeneTree:ENSGT00510000046310 InParanoid:P83917
EvolutionaryTrace:P83917 NextBio:281200 Bgee:P83917 CleanEx:MM_CBX1
Genevestigator:P83917 GermOnline:ENSMUSG00000018666 Uniprot:P83917
Length = 185
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 33/84 (39%), Positives = 48/84 (57%)
Query: 144 KEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLI 203
K+K ++ G R L E IIGAT G +L+ W+ SDEADL+PA+ K PQ +I
Sbjct: 102 KKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVI 161
Query: 204 RFFEQHLV---FPSENNASKQSSS 224
F+E+ L +PSE++ K +
Sbjct: 162 SFYEERLTWHSYPSEDDDKKDDKN 185
>RGD|1310714 [details] [associations]
symbol:Cbx1 "chromobox homolog 1" species:10116 "Rattus
norvegicus" [GO:0000775 "chromosome, centromeric region"
evidence=ISO] [GO:0000785 "chromatin" evidence=ISO] [GO:0001939
"female pronucleus" evidence=IEA;ISO] [GO:0001940 "male pronucleus"
evidence=IEA;ISO] [GO:0005721 "centromeric heterochromatin"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA;ISO]
[GO:0010369 "chromocenter" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] InterPro:IPR008251
InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013 SMART:SM00298
SMART:SM00300 Pfam:PF00385 RGD:1310714 GO:GO:0045892 GO:GO:0005819
GO:GO:0005721 GO:GO:0001939 EMBL:CH473948 InterPro:IPR016197
SUPFAM:SSF54160 GO:GO:0010369 CTD:10951 KO:K11585 OMA:KSAQEGK
OrthoDB:EOG4DBTG1 GO:GO:0001940 InterPro:IPR017984
InterPro:IPR023780 InterPro:IPR023779 PRINTS:PR00504
PROSITE:PS00598 GeneTree:ENSGT00510000046310 IPI:IPI00768751
RefSeq:XP_001081346.2 RefSeq:XP_340886.4 Ensembl:ENSRNOT00000011665
GeneID:360609 KEGG:rno:360609 UCSC:RGD:1310714 NextBio:673429
Uniprot:D4A3T3
Length = 185
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 33/84 (39%), Positives = 48/84 (57%)
Query: 144 KEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLI 203
K+K ++ G R L E IIGAT G +L+ W+ SDEADL+PA+ K PQ +I
Sbjct: 102 KKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVI 161
Query: 204 RFFEQHLV---FPSENNASKQSSS 224
F+E+ L +PSE++ K +
Sbjct: 162 SFYEERLTWHSYPSEDDDKKDDKN 185
>UNIPROTKB|O93480 [details] [associations]
symbol:CBX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001940 "male pronucleus" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0010369 "chromocenter" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0001939 "female
pronucleus" evidence=IEA] InterPro:IPR008251 InterPro:IPR000953
Pfam:PF01393 PROSITE:PS50013 SMART:SM00298 SMART:SM00300
Pfam:PF00385 GO:GO:0045892 GO:GO:0005819 GO:GO:0005721
GO:GO:0001939 InterPro:IPR016197 SUPFAM:SSF54160 GO:GO:0010369
CTD:10951 eggNOG:NOG264487 HOGENOM:HOG000220852 HOVERGEN:HBG000400
KO:K11585 OMA:KSAQEGK GO:GO:0001940 InterPro:IPR017984
InterPro:IPR023780 InterPro:IPR023779 PRINTS:PR00504
PROSITE:PS00598 GeneTree:ENSGT00510000046310 HSSP:P83917
EMBL:AADN02023958 EMBL:AB005617 IPI:IPI00590540 RefSeq:NP_989663.1
UniGene:Gga.25863 ProteinModelPortal:O93480 SMR:O93480
STRING:O93480 Ensembl:ENSGALT00000000309 GeneID:374237
KEGG:gga:374237 InParanoid:O93480 NextBio:20813735 Uniprot:O93480
Length = 185
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 32/84 (38%), Positives = 48/84 (57%)
Query: 144 KEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLI 203
K+K ++ G R E IIGAT G +L+ W+ SDEADL+PA+ K PQ +I
Sbjct: 102 KKKEESEKPRGFARGFEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANIKCPQVVI 161
Query: 204 RFFEQHLV---FPSENNASKQSSS 224
F+E+ L +PSE++ K+ +
Sbjct: 162 SFYEERLTWHSYPSEDDDKKEDKN 185
>ZFIN|ZDB-GENE-030131-4945 [details] [associations]
symbol:cbx1a "chromobox homolog 1a (HP1 beta
homolog Drosophila)" species:7955 "Danio rerio" [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR008251 InterPro:IPR000953
Pfam:PF01393 PROSITE:PS50013 SMART:SM00298 SMART:SM00300
Pfam:PF00385 ZFIN:ZDB-GENE-030131-4945 GO:GO:0005634
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR017984
InterPro:IPR023780 InterPro:IPR023779 PRINTS:PR00504
PROSITE:PS00598 GeneTree:ENSGT00510000046310 EMBL:CR450718
IPI:IPI00507712 Ensembl:ENSDART00000143088 ArrayExpress:F1QM86
Bgee:F1QM86 Uniprot:F1QM86
Length = 212
Score = 139 (54.0 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 34/84 (40%), Positives = 44/84 (52%)
Query: 144 KEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLI 203
K K D G R L E IIGAT G +L+ W+ SDEADL+PA+ K PQ +I
Sbjct: 129 KRKDEQDKPRGFARGLDPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVI 188
Query: 204 RFFEQHLV---FPSENNASKQSSS 224
F+E+ L +PSE K +
Sbjct: 189 SFYEERLTWHSYPSEEEEKKDDKN 212
>FB|FBgn0030082 [details] [associations]
symbol:HP1b "Heterochromatin Protein 1b" species:7227
"Drosophila melanogaster" [GO:0003682 "chromatin binding"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0010369
"chromocenter" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0031452 "negative regulation of heterochromatin assembly"
evidence=IMP] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] InterPro:IPR008251
InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013 SMART:SM00298
SMART:SM00300 Pfam:PF00385 GO:GO:0005634 GO:GO:0045944
GO:GO:0003682 GO:GO:0000122 InterPro:IPR016197 SUPFAM:SSF54160
GO:GO:0031452 eggNOG:NOG264487 InterPro:IPR017984
InterPro:IPR023780 InterPro:IPR023779 PRINTS:PR00504
PROSITE:PS00598 OrthoDB:EOG40CG02 HSSP:P05205 EMBL:AY060836
ProteinModelPortal:Q95SE0 SMR:Q95SE0 IntAct:Q95SE0 STRING:Q95SE0
PaxDb:Q95SE0 PRIDE:Q95SE0 FlyBase:FBgn0030082 InParanoid:Q95SE0
ArrayExpress:Q95SE0 Bgee:Q95SE0 Uniprot:Q95SE0
Length = 240
Score = 139 (54.0 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 32/102 (31%), Positives = 58/102 (56%)
Query: 124 PEEVAYKGSQHNNSVNDIVVKEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGS 183
PE + S+ + + D ++K L +G +R L +I+GAT G +L+ W+GS
Sbjct: 71 PESIR---SKRKSFLEDDTEEQKKL----IGFERGLEASKILGATDSSGHLMFLMKWKGS 123
Query: 184 DEADLLPAEICKRKYPQPLIRFFEQHLVFPS-ENNASKQSSS 224
D ADL+PA++ + PQ +I+F+E+ L + + N + ++S
Sbjct: 124 DHADLVPAKLANTRCPQVVIQFYEERLTWHTGSGNGNGNTNS 165
>UNIPROTKB|J3KS05 [details] [associations]
symbol:CBX1 "Chromobox protein homolog 1" species:9606
"Homo sapiens" [GO:0001939 "female pronucleus" evidence=IEA]
[GO:0001940 "male pronucleus" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=IEA] [GO:0010369
"chromocenter" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR008251
InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013 SMART:SM00298
SMART:SM00300 Pfam:PF00385 GO:GO:0005634 InterPro:IPR016197
SUPFAM:SSF54160 HGNC:HGNC:1551 ChiTaRS:CBX1 InterPro:IPR017984
InterPro:IPR023780 InterPro:IPR023779 PRINTS:PR00504
PROSITE:PS00598 EMBL:AC006468 EMBL:AC004477 Ensembl:ENST00000581003
Uniprot:J3KS05
Length = 174
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 144 KEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLI 203
K+K ++ G R L E IIGAT G +L+ W+ SDEADL+PA+ K PQ +I
Sbjct: 102 KKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVI 161
Query: 204 RFFEQHLVFPS 214
F+E+ L + S
Sbjct: 162 SFYEERLTWHS 172
>UNIPROTKB|H9L191 [details] [associations]
symbol:CBX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001939 "female pronucleus" evidence=IEA] [GO:0001940
"male pronucleus" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR008251 InterPro:IPR000953
Pfam:PF01393 PROSITE:PS50013 SMART:SM00298 SMART:SM00300
Pfam:PF00385 GO:GO:0005634 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR017984 InterPro:IPR023780 InterPro:IPR023779
PRINTS:PR00504 PROSITE:PS00598 GeneTree:ENSGT00510000046310
EMBL:AADN02023958 Ensembl:ENSGALT00000029894 Uniprot:H9L191
Length = 168
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 144 KEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLI 203
K+K ++ G R E IIGAT G +L+ W+ SDEADL+PA+ K PQ +I
Sbjct: 102 KKKEESEKPRGFARGFEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANIKCPQVVI 161
Query: 204 RFFEQHL 210
F+E+ L
Sbjct: 162 SFYEERL 168
>ZFIN|ZDB-GENE-040625-68 [details] [associations]
symbol:cbx1b "chromobox homolog 1b (HP1 beta homolog
Drosophila)" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR008251 InterPro:IPR000953 Pfam:PF01393
PROSITE:PS50013 SMART:SM00298 SMART:SM00300 Pfam:PF00385
ZFIN:ZDB-GENE-040625-68 GO:GO:0005634 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:NOG264487 HOGENOM:HOG000220852
HOVERGEN:HBG000400 KO:K11585 OMA:KSAQEGK OrthoDB:EOG4DBTG1
InterPro:IPR017984 InterPro:IPR023780 InterPro:IPR023779
PRINTS:PR00504 PROSITE:PS00598 GeneTree:ENSGT00510000046310
HSSP:P83917 EMBL:BX248092 EMBL:CT030027 EMBL:BC071539
IPI:IPI00513223 RefSeq:NP_001002090.1 UniGene:Dr.83592 SMR:Q6IQ71
Ensembl:ENSDART00000039667 Ensembl:ENSDART00000136593 GeneID:415180
KEGG:dre:415180 CTD:415180 InParanoid:Q6IQ71 NextBio:20818850
Uniprot:Q6IQ71
Length = 203
Score = 132 (51.5 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 30/74 (40%), Positives = 41/74 (55%)
Query: 154 GIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLIRFFEQHLV-- 211
G R L E IIGAT G +L+ W+ SDEADL+PA+ K PQ +I F+E+ L
Sbjct: 130 GFARGLDPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWH 189
Query: 212 -FPSENNASKQSSS 224
+P+E K +
Sbjct: 190 SYPTEEEEKKDDKN 203
>ZFIN|ZDB-GENE-030131-5553 [details] [associations]
symbol:cbx5 "chromobox homolog 5 (HP1 alpha
homolog, Drosophila)" species:7955 "Danio rerio" [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR008251 InterPro:IPR000953
Pfam:PF01393 PROSITE:PS50013 SMART:SM00298 SMART:SM00300
Pfam:PF00385 ZFIN:ZDB-GENE-030131-5553 GO:GO:0005634
InterPro:IPR016197 SUPFAM:SSF54160 HOGENOM:HOG000220852
HOVERGEN:HBG000400 InterPro:IPR017984 InterPro:IPR023780
InterPro:IPR023779 PRINTS:PR00504 PROSITE:PS00598
GeneTree:ENSGT00510000046310 CTD:23468 eggNOG:NOG132879 KO:K11587
OMA:DKHNTWE OrthoDB:EOG4NVZMP EMBL:BX571773 EMBL:BC129317
IPI:IPI00489619 RefSeq:NP_001073653.1 UniGene:Dr.104817 SMR:A1L223
STRING:A1L223 Ensembl:ENSDART00000086985 Ensembl:ENSDART00000142760
Ensembl:ENSDART00000143340 GeneID:563396 KEGG:dre:563396
InParanoid:A1L223 NextBio:20884874 Uniprot:A1L223
Length = 204
Score = 131 (51.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 130 KGSQHNNSVNDIVVKEKLLNDMNL---GIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEA 186
K S+ N + K+K D L G +R L E+IIGAT G +L+ W+ SDEA
Sbjct: 107 KNSEEENGSSSKPKKKK--EDEILVARGFERGLEPEKIIGATDSCGDLMFLMKWKDSDEA 164
Query: 187 DLLPAEICKRKYPQPLIRFFEQHLVFPSENNASKQSSS 224
DL+ A+ K PQ +I F+E+ L + + + ++S++
Sbjct: 165 DLVLAKEANHKCPQIVIAFYEERLTWHEDGDKKEKSAT 202
>FB|FBgn0031613 [details] [associations]
symbol:HP6 "Heterochromatin protein 6" species:7227
"Drosophila melanogaster" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007143 "female
meiosis" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0016233 "telomere capping" evidence=IMP]
[GO:0005701 "polytene chromosome chromocenter" evidence=IDA]
[GO:0035012 "polytene chromosome, telomeric region" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] [GO:0051276 "chromosome organization" evidence=ISS]
[GO:0000785 "chromatin" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] InterPro:IPR008251 InterPro:IPR000953
Pfam:PF01393 PROSITE:PS50013 SMART:SM00298 SMART:SM00300
GO:GO:0005730 EMBL:AE014134 GO:GO:0022008 GO:GO:0007143
InterPro:IPR016197 SUPFAM:SSF54160 GO:GO:0016233
GeneTree:ENSGT00510000046310 GO:GO:0005701 GO:GO:0035012
EMBL:BT023621 RefSeq:NP_608842.1 UniGene:Dm.34160 SMR:Q9VR09
IntAct:Q9VR09 MINT:MINT-758175 STRING:Q9VR09
EnsemblMetazoa:FBtr0077444 GeneID:33661 KEGG:dme:Dmel_CG15636
UCSC:CG15636-RA CTD:33661 FlyBase:FBgn0031613 eggNOG:NOG256053
InParanoid:Q9VR09 OMA:WHNNANG OrthoDB:EOG4XD27T GenomeRNAi:33661
NextBio:784672 Uniprot:Q9VR09
Length = 106
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 154 GIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLIRFFEQHLVFP 213
G D L I+GA G +L+ W+G DEA L+PAE+ + PQ +I F+E+ +VF
Sbjct: 19 GFDLGLEPLRILGACNWSGKLTFLMQWKGCDEAGLVPAEVLNVRCPQMVISFYEERIVFT 78
Query: 214 SENN 217
E +
Sbjct: 79 DEGD 82
>FB|FBgn0003607 [details] [associations]
symbol:Su(var)205 "Suppressor of variegation 205"
species:7227 "Drosophila melanogaster" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0006343
"establishment of chromatin silencing" evidence=IMP] [GO:0000781
"chromosome, telomeric region" evidence=IDA;NAS] [GO:0005721
"centromeric heterochromatin" evidence=NAS] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0006342 "chromatin
silencing" evidence=IMP] [GO:0005720 "nuclear heterochromatin"
evidence=IDA] [GO:0005703 "polytene chromosome puff"
evidence=IDA;TAS] [GO:0005701 "polytene chromosome chromocenter"
evidence=IDA;TAS] [GO:0035012 "polytene chromosome, telomeric
region" evidence=IDA;TAS] [GO:0000775 "chromosome, centromeric
region" evidence=NAS;TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0000792 "heterochromatin" evidence=IDA;NAS;TAS] [GO:0042393
"histone binding" evidence=NAS] [GO:0003729 "mRNA binding"
evidence=NAS] [GO:0035064 "methylated histone residue binding"
evidence=TAS] [GO:0000723 "telomere maintenance" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0031060 "regulation of histone methylation"
evidence=IMP] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0000793 "condensed chromosome" evidence=IDA]
[GO:0003696 "satellite DNA binding" evidence=IDA] [GO:0000182 "rDNA
binding" evidence=IDA] [GO:0000780 "condensed nuclear chromosome,
centromeric region" evidence=IDA] [GO:0051276 "chromosome
organization" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0034773 "histone H4-K20 trimethylation"
evidence=IMP] [GO:0005694 "chromosome" evidence=IDA] [GO:0044026
"DNA hypermethylation" evidence=IMP] [GO:0005704 "polytene
chromosome band" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR008251 InterPro:IPR000953 Pfam:PF01393
PROSITE:PS50013 SMART:SM00298 SMART:SM00300 Pfam:PF00385
GO:GO:0045893 GO:GO:0000780 EMBL:AE014134 GO:GO:0022008
GO:GO:0042981 GO:GO:0005720 GO:GO:0003729 GO:GO:0006351
GO:GO:0003682 GO:GO:0030702 GO:GO:0005721 GO:GO:0042393
InterPro:IPR016197 SUPFAM:SSF54160 GO:GO:0034773 GO:GO:0000723
InterPro:IPR017984 InterPro:IPR023780 InterPro:IPR023779
PRINTS:PR00504 PROSITE:PS00598 GeneTree:ENSGT00510000046310
eggNOG:NOG132879 KO:K11587 GO:GO:0005703 GO:GO:0003696
GO:GO:0000182 GO:GO:0031060 PDB:1Q3L PDBsum:1Q3L PDB:1KNA PDB:1KNE
PDBsum:1KNA PDBsum:1KNE EMBL:M57574 EMBL:M14131 EMBL:FJ218607
EMBL:FJ218612 EMBL:FJ218613 EMBL:FJ218614 EMBL:FJ218615
EMBL:FJ218616 EMBL:FJ218617 EMBL:FJ218618 EMBL:FJ218619
EMBL:FJ218620 EMBL:FJ218621 EMBL:FJ218622 EMBL:FJ218623
EMBL:FJ218624 EMBL:FJ218625 EMBL:FJ218626 EMBL:FJ218627
EMBL:FJ218628 EMBL:FJ218629 EMBL:FJ218630 EMBL:FJ218631
EMBL:FJ218632 EMBL:FJ218633 EMBL:FJ218634 EMBL:FJ218635
EMBL:FJ218636 EMBL:FJ218637 EMBL:FJ218638 EMBL:FJ218639
EMBL:AY061119 PIR:A39268 RefSeq:NP_476755.1 RefSeq:NP_723361.1
UniGene:Dm.3713 PDB:3P7J PDBsum:3P7J ProteinModelPortal:P05205
SMR:P05205 DIP:DIP-21869N IntAct:P05205 MINT:MINT-271388
STRING:P05205 PaxDb:P05205 EnsemblMetazoa:FBtr0079635
EnsemblMetazoa:FBtr0079636 GeneID:34119 KEGG:dme:Dmel_CG8409
CTD:34119 FlyBase:FBgn0003607 InParanoid:P05205 OMA:PETENTW
OrthoDB:EOG40CG02 PhylomeDB:P05205 ChiTaRS:Su(var)205
EvolutionaryTrace:P05205 GenomeRNAi:34119 NextBio:786946
Bgee:P05205 GermOnline:CG8409 GO:GO:0005704 GO:GO:0005701
GO:GO:0035012 GO:GO:0044026 GO:GO:0006343 Uniprot:P05205
Length = 206
Score = 123 (48.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 22/63 (34%), Positives = 41/63 (65%)
Query: 154 GIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLIRFFEQHLVFP 213
G DR L E+I+GA+ G +L+ ++G D+A+++P+ + K P+ +I F+E+ L +
Sbjct: 142 GFDRGLEAEKILGASDNNGRLTFLIQFKGVDQAEMVPSSVANEKIPRMVIHFYEERLSWY 201
Query: 214 SEN 216
S+N
Sbjct: 202 SDN 204
Score = 35 (17.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 8/41 (19%), Positives = 19/41 (46%)
Query: 30 EQKDLSQQSNENNQGLKSGDHENIHNVNTSKIGIKTEENPT 70
E+K + + + + K+ + + + +TS + E PT
Sbjct: 77 EEKSAASKKDRPSSSAKAKETQGRASSSTSTASKRKSEEPT 117
>UNIPROTKB|O93481 [details] [associations]
symbol:CBX3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005720
"nuclear heterochromatin" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR008251 InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013
SMART:SM00298 SMART:SM00300 Pfam:PF00385 GO:GO:0045892
GO:GO:0005819 GO:GO:0005720 GO:GO:0005719 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:NOG264487 HOGENOM:HOG000220852
HOVERGEN:HBG000400 InterPro:IPR017984 InterPro:IPR023780
InterPro:IPR023779 PRINTS:PR00504 PROSITE:PS00598
GeneTree:ENSGT00510000046310 CTD:11335 KO:K11586 OrthoDB:EOG4N30QB
HSSP:P83917 EMBL:AC140791 EMBL:AB005618 IPI:IPI00574223
RefSeq:NP_989974.1 UniGene:Gga.4062 SMR:O93481 STRING:O93481
Ensembl:ENSGALT00000017979 GeneID:395355 KEGG:gga:395355
InParanoid:O93481 NextBio:20815440 Uniprot:O93481
Length = 174
Score = 119 (46.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 123 EPEEVAYKGSQHNNSVNDIVVKEKLLN-DMNLGIDRNLPVEEIIGATIEVGFPAYLVTWE 181
E + A + S ++ +D K+K + D G R L E IIGAT G +L+ W+
Sbjct: 75 EKTDGAKRKSLSDSESDDSKSKKKRDSVDKPRGFARGLDPERIIGATDSSGELMFLMKWK 134
Query: 182 GSDEADLLPAEICKRKYPQPLIRFFEQHLVFPS 214
SDEADL+ A+ K PQ +I F+E+ L + S
Sbjct: 135 DSDEADLVLAKEANVKCPQIVIAFYEERLTWHS 167
>UNIPROTKB|F1N1S3 [details] [associations]
symbol:CBX3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] [GO:0005720 "nuclear
heterochromatin" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] InterPro:IPR008251 InterPro:IPR000953 Pfam:PF01393
PROSITE:PS50013 SMART:SM00298 SMART:SM00300 Pfam:PF00385
GO:GO:0045892 GO:GO:0005819 GO:GO:0005720 GO:GO:0005719
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR017984
InterPro:IPR023780 PRINTS:PR00504 GeneTree:ENSGT00510000046310
OMA:REANTRC EMBL:DAAA02000012 IPI:IPI00686381
Ensembl:ENSBTAT00000007283 NextBio:20901371 Uniprot:F1N1S3
Length = 181
Score = 120 (47.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 132 SQHNNSVNDIVVKEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPA 191
S ++ +D K++ D G+ R L E IIGAT G +L+ W+ SDEADL+ A
Sbjct: 92 SLSDSESHDSKSKKRDAADKPRGLVRGLDPERIIGATDGSGELMFLMKWKDSDEADLVLA 151
Query: 192 EICKRKYPQPLIRFFEQHLVFPS 214
+ K PQ +I F+E+ L + S
Sbjct: 152 KEANMKCPQIVIAFYEERLTWHS 174
>UNIPROTKB|E2QXC6 [details] [associations]
symbol:CBX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR008251 InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013
SMART:SM00298 SMART:SM00300 Pfam:PF00385 GO:GO:0045892
GO:GO:0005819 GO:GO:0005720 GO:GO:0005719 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR017984 InterPro:IPR023780
InterPro:IPR023779 PRINTS:PR00504 PROSITE:PS00598
GeneTree:ENSGT00510000046310 OMA:REANTRC EMBL:AAEX03009385
ProteinModelPortal:E2QXC6 Ensembl:ENSCAFT00000004632 Uniprot:E2QXC6
Length = 183
Score = 119 (46.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 144 KEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLI 203
K++ D G R L E IIGAT G +L+ W+ SDEADL+ A+ K PQ +I
Sbjct: 106 KKRDAADKPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVI 165
Query: 204 RFFEQHLVFPS 214
F+E+ L + S
Sbjct: 166 AFYEERLTWHS 176
>UNIPROTKB|Q13185 [details] [associations]
symbol:CBX3 "Chromobox protein homolog 3" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0019904
"protein domain specific binding" evidence=IPI] [GO:0005637
"nuclear inner membrane" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0000785 "chromatin" evidence=IDA]
[GO:0005819 "spindle" evidence=IDA] [GO:0000779 "condensed
chromosome, centromeric region" evidence=ISS] [GO:0005719 "nuclear
euchromatin" evidence=IDA] [GO:0005720 "nuclear heterochromatin"
evidence=IDA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0042802
"identical protein binding" evidence=IPI] InterPro:IPR008251
InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013 SMART:SM00298
SMART:SM00300 Pfam:PF00385 GO:GO:0045892 GO:GO:0005819
GO:GO:0006351 GO:GO:0006338 GO:GO:0005719 InterPro:IPR016197
SUPFAM:SSF54160 GO:GO:0005637 GO:GO:0000779 GO:GO:0031618
eggNOG:NOG264487 HOGENOM:HOG000220852 HOVERGEN:HBG000400
InterPro:IPR017984 InterPro:IPR023780 InterPro:IPR023779
PRINTS:PR00504 PROSITE:PS00598 EMBL:U26312 EMBL:AB030905
EMBL:AF136630 EMBL:BC000954 EMBL:BC014380 IPI:IPI00297579
RefSeq:NP_009207.2 RefSeq:NP_057671.2 UniGene:Hs.381189 PDB:2L11
PDB:3DM1 PDB:3KUP PDB:3TZD PDBsum:2L11 PDBsum:3DM1 PDBsum:3KUP
PDBsum:3TZD ProteinModelPortal:Q13185 SMR:Q13185 DIP:DIP-5985N
IntAct:Q13185 MINT:MINT-5002782 STRING:Q13185 PhosphoSite:Q13185
DMDM:116241284 SWISS-2DPAGE:Q13185 PaxDb:Q13185 PeptideAtlas:Q13185
PRIDE:Q13185 DNASU:11335 Ensembl:ENST00000337620
Ensembl:ENST00000396386 GeneID:11335 KEGG:hsa:11335 UCSC:uc003sxt.3
CTD:11335 GeneCards:GC07P026207 HGNC:HGNC:1553 HPA:CAB001973
HPA:HPA004902 MIM:604477 neXtProt:NX_Q13185 PharmGKB:PA26128
InParanoid:Q13185 KO:K11586 OMA:REANTRC OrthoDB:EOG4N30QB
PhylomeDB:Q13185 ChiTaRS:CBX3 EvolutionaryTrace:Q13185
GenomeRNAi:11335 NextBio:43065 ArrayExpress:Q13185 Bgee:Q13185
CleanEx:HS_CBX3 Genevestigator:Q13185 GermOnline:ENSG00000122565
Uniprot:Q13185
Length = 183
Score = 119 (46.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 144 KEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLI 203
K++ D G R L E IIGAT G +L+ W+ SDEADL+ A+ K PQ +I
Sbjct: 106 KKRDAADKPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVI 165
Query: 204 RFFEQHLVFPS 214
F+E+ L + S
Sbjct: 166 AFYEERLTWHS 176
>UNIPROTKB|F1ST98 [details] [associations]
symbol:CBX3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] [GO:0005720 "nuclear
heterochromatin" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] InterPro:IPR008251 InterPro:IPR000953 Pfam:PF01393
PROSITE:PS50013 SMART:SM00298 SMART:SM00300 Pfam:PF00385
GO:GO:0045892 GO:GO:0005819 GO:GO:0005720 GO:GO:0005719
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR017984
InterPro:IPR023780 InterPro:IPR023779 PRINTS:PR00504
PROSITE:PS00598 GeneTree:ENSGT00510000046310 OMA:REANTRC
EMBL:FP236743 EMBL:FP476109 Ensembl:ENSSSCT00000018192
Uniprot:F1ST98
Length = 183
Score = 119 (46.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 144 KEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLI 203
K++ D G R L E IIGAT G +L+ W+ SDEADL+ A+ K PQ +I
Sbjct: 106 KKRDAADKPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVI 165
Query: 204 RFFEQHLVFPS 214
F+E+ L + S
Sbjct: 166 AFYEERLTWHS 176
>UNIPROTKB|Q5R6X7 [details] [associations]
symbol:CBX3 "Chromobox protein homolog 3" species:9601
"Pongo abelii" [GO:0000779 "condensed chromosome, centromeric
region" evidence=ISS] [GO:0000785 "chromatin" evidence=ISS]
[GO:0005635 "nuclear envelope" evidence=ISS] [GO:0005719 "nuclear
euchromatin" evidence=ISS] [GO:0005720 "nuclear heterochromatin"
evidence=ISS] [GO:0005819 "spindle" evidence=ISS] [GO:0019904
"protein domain specific binding" evidence=ISS] [GO:0031618
"nuclear centromeric heterochromatin" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR008251 InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013
SMART:SM00298 SMART:SM00300 Pfam:PF00385 GO:GO:0005635
GO:GO:0019904 GO:GO:0045892 GO:GO:0005819 GO:GO:0006351
GO:GO:0016568 GO:GO:0005719 InterPro:IPR016197 SUPFAM:SSF54160
GO:GO:0000779 GO:GO:0031618 HOVERGEN:HBG000400 InterPro:IPR017984
InterPro:IPR023780 InterPro:IPR023779 PRINTS:PR00504
PROSITE:PS00598 GeneTree:ENSGT00510000046310 CTD:11335 KO:K11586
OMA:REANTRC EMBL:CR860350 RefSeq:NP_001126464.1 UniGene:Pab.18762
ProteinModelPortal:Q5R6X7 SMR:Q5R6X7 PRIDE:Q5R6X7
Ensembl:ENSPPYT00000020641 GeneID:100173451 KEGG:pon:100173451
InParanoid:Q5R6X7 Uniprot:Q5R6X7
Length = 183
Score = 119 (46.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 144 KEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLI 203
K++ D G R L E IIGAT G +L+ W+ SDEADL+ A+ K PQ +I
Sbjct: 106 KKRDAADKPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVI 165
Query: 204 RFFEQHLVFPS 214
F+E+ L + S
Sbjct: 166 AFYEERLTWHS 176
>UNIPROTKB|Q6E6J8 [details] [associations]
symbol:Q6E6J8 "Heterochromatin protein 1 gamma"
species:10029 "Cricetulus griseus" [GO:0000779 "condensed
chromosome, centromeric region" evidence=ISS] [GO:0000785
"chromatin" evidence=ISS] [GO:0005635 "nuclear envelope"
evidence=ISS] [GO:0005719 "nuclear euchromatin" evidence=ISS]
[GO:0005720 "nuclear heterochromatin" evidence=ISS] [GO:0005819
"spindle" evidence=ISS] [GO:0019904 "protein domain specific
binding" evidence=ISS] [GO:0031618 "nuclear centromeric
heterochromatin" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR008251
InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013 SMART:SM00298
SMART:SM00300 Pfam:PF00385 GO:GO:0005635 GO:GO:0019904
GO:GO:0045892 GO:GO:0005819 GO:GO:0005719 InterPro:IPR016197
SUPFAM:SSF54160 GO:GO:0000779 GO:GO:0031618 HOVERGEN:HBG000400
InterPro:IPR017984 InterPro:IPR023780 InterPro:IPR023779
PRINTS:PR00504 PROSITE:PS00598 EMBL:AY548738 RefSeq:NP_001233631.1
ProteinModelPortal:Q6E6J8 SMR:Q6E6J8 PRIDE:Q6E6J8 GeneID:100689443
Uniprot:Q6E6J8
Length = 183
Score = 119 (46.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 144 KEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLI 203
K++ D G R L E IIGAT G +L+ W+ SDEADL+ A+ K PQ +I
Sbjct: 106 KKRDAADKPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVI 165
Query: 204 RFFEQHLVFPS 214
F+E+ L + S
Sbjct: 166 AFYEERLTWHS 176
>UNIPROTKB|Q5RJK5 [details] [associations]
symbol:Cbx3 "Chromobox homolog 3 (HP1 gamma homolog,
Drosophila), isoform CRA_a" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR008251
InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013 SMART:SM00298
SMART:SM00300 Pfam:PF00385 RGD:1549705 GO:GO:0045892 GO:GO:0005819
GO:GO:0005720 GO:GO:0005719 InterPro:IPR016197 SUPFAM:SSF54160
HOGENOM:HOG000220852 HOVERGEN:HBG000400 InterPro:IPR017984
InterPro:IPR023780 InterPro:IPR023779 PRINTS:PR00504
PROSITE:PS00598 GeneTree:ENSGT00510000046310 CTD:11335 KO:K11586
EMBL:CH474011 EMBL:BC086601 EMBL:BC127508 IPI:IPI00189523
RefSeq:NP_001008314.2 SMR:Q5RJK5 STRING:Q5RJK5
Ensembl:ENSRNOT00000015828 GeneID:297093 KEGG:rno:297093
eggNOG:NOG148844 InParanoid:Q5RJK5 NextBio:642052
Genevestigator:Q5RJK5 Uniprot:Q5RJK5
Length = 183
Score = 119 (46.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 144 KEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLI 203
K++ D G R L E IIGAT G +L+ W+ SDEADL+ A+ K PQ +I
Sbjct: 106 KKRDAADKPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVI 165
Query: 204 RFFEQHLVFPS 214
F+E+ L + S
Sbjct: 166 AFYEERLTWHS 176
>UNIPROTKB|F1ND82 [details] [associations]
symbol:CBX3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005720
"nuclear heterochromatin" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR008251 InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013
SMART:SM00298 SMART:SM00300 Pfam:PF00385 GO:GO:0045892
GO:GO:0005819 GO:GO:0005720 GO:GO:0005719 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR017984 InterPro:IPR023780
InterPro:IPR023779 PRINTS:PR00504 PROSITE:PS00598
GeneTree:ENSGT00510000046310 OMA:REANTRC EMBL:AC140791
IPI:IPI00823404 Ensembl:ENSGALT00000037831 ArrayExpress:F1ND82
Uniprot:F1ND82
Length = 184
Score = 119 (46.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 123 EPEEVAYKGSQHNNSVNDIVVKEKLLN-DMNLGIDRNLPVEEIIGATIEVGFPAYLVTWE 181
E + A + S ++ +D K+K + D G R L E IIGAT G +L+ W+
Sbjct: 85 EKTDGAKRKSLSDSESDDSKSKKKRDSVDKPRGFARGLDPERIIGATDSSGELMFLMKWK 144
Query: 182 GSDEADLLPAEICKRKYPQPLIRFFEQHLVFPS 214
SDEADL+ A+ K PQ +I F+E+ L + S
Sbjct: 145 DSDEADLVLAKEANVKCPQIVIAFYEERLTWHS 177
>RGD|2322491 [details] [associations]
symbol:LOC100360260 "chromobox homolog 3-like" species:10116
"Rattus norvegicus" [GO:0005719 "nuclear euchromatin" evidence=IEA]
[GO:0005720 "nuclear heterochromatin" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR008251 InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013
SMART:SM00298 SMART:SM00300 Pfam:PF00385 RGD:2322491 GO:GO:0005634
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR017984
InterPro:IPR023780 InterPro:IPR023779 PRINTS:PR00504
PROSITE:PS00598 GeneTree:ENSGT00510000046310 KO:K11586
OrthoDB:EOG4N30QB IPI:IPI00949626 RefSeq:XP_002728446.1
RefSeq:XP_003752944.1 Ensembl:ENSRNOT00000066349 GeneID:100360260
KEGG:rno:100360260 UCSC:RGD:2322491 Uniprot:D3ZRS6
Length = 183
Score = 118 (46.6 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 144 KEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLI 203
K++ D G R L E IIGAT G +L+ W+ SDEADL+ A+ K PQ +I
Sbjct: 106 KKRDAADKPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEVNMKCPQIVI 165
Query: 204 RFFEQHLVFPS 214
F+E+ L + S
Sbjct: 166 AFYEERLTWHS 176
>UNIPROTKB|B5MD17 [details] [associations]
symbol:CBX1 "Chromobox protein homolog 1" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR008251 InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013
SMART:SM00298 SMART:SM00300 Pfam:PF00385 GO:GO:0005634
InterPro:IPR016197 SUPFAM:SSF54160 HGNC:HGNC:1551
HOGENOM:HOG000220852 HOVERGEN:HBG000400 OrthoDB:EOG4DBTG1
ChiTaRS:CBX1 InterPro:IPR017984 InterPro:IPR023780
InterPro:IPR023779 PRINTS:PR00504 PROSITE:PS00598 EMBL:AC006468
EMBL:AC004477 IPI:IPI01014449 ProteinModelPortal:B5MD17 SMR:B5MD17
STRING:B5MD17 PRIDE:B5MD17 Ensembl:ENST00000402583
ArrayExpress:B5MD17 Bgee:B5MD17 Uniprot:B5MD17
Length = 168
Score = 113 (44.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 154 GIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLIRFF 206
G R L E IIGAT G +L+ W+ SDEADL+PA+ K PQ +I F+
Sbjct: 116 GFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFY 168
>UNIPROTKB|F1P737 [details] [associations]
symbol:F1P737 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR008251 InterPro:IPR000953 Pfam:PF01393 PROSITE:PS50013
SMART:SM00298 SMART:SM00300 Pfam:PF00385 GO:GO:0005634
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR017984
InterPro:IPR023780 InterPro:IPR023779 PRINTS:PR00504
PROSITE:PS00598 GeneTree:ENSGT00510000046310 EMBL:AAEX03017899
Ensembl:ENSCAFT00000038031 OMA:ESRITWH Uniprot:F1P737
Length = 171
Score = 110 (43.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 144 KEKLLNDMNLGIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLI 203
K++ D G R+L E IIGA G +L+ W+ SDEAD + A+ K PQ +I
Sbjct: 94 KKRDAADKTRGFARSLDPERIIGAMDSSGELMFLMKWKDSDEADSVLAKEANMKCPQIVI 153
Query: 204 RFFEQHLVFPS 214
F+E+ L + S
Sbjct: 154 AFYEERLTWHS 164
>FB|FBgn0039019 [details] [associations]
symbol:HP1c "Heterochromatin Protein 1c" species:7227
"Drosophila melanogaster" [GO:0003682 "chromatin binding"
evidence=ISS;IDA] [GO:0005705 "polytene chromosome interband"
evidence=IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0000791 "euchromatin"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031940 "positive regulation of
chromatin silencing at telomere" evidence=IMP] [GO:0043234 "protein
complex" evidence=IDA] InterPro:IPR008251 InterPro:IPR000953
Pfam:PF01393 PROSITE:PS50013 SMART:SM00298 Pfam:PF00385
EMBL:AE014297 GO:GO:0005634 GO:GO:0043234 GO:GO:0006357
GO:GO:0003682 GO:GO:0035064 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR017984 InterPro:IPR023780 InterPro:IPR023779
PRINTS:PR00504 PROSITE:PS00598 GeneTree:ENSGT00510000046310
KO:K11586 GO:GO:0005705 GO:GO:0031940 HSSP:P05205 EMBL:AY061322
RefSeq:NP_651093.1 UniGene:Dm.1285 SMR:Q9VCU6 STRING:Q9VCU6
EnsemblMetazoa:FBtr0084309 GeneID:42696 KEGG:dme:Dmel_CG6990
UCSC:CG6990-RA CTD:42696 FlyBase:FBgn0039019 eggNOG:NOG261822
InParanoid:Q9VCU6 OMA:WEPEENC OrthoDB:EOG4JWSWG GenomeRNAi:42696
NextBio:830106 Uniprot:Q9VCU6
Length = 237
Score = 110 (43.8 bits), Expect = 0.00018, P = 0.00018
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 154 GIDRNLPVEEIIGATIEVGFPAYLVTWEGSDEADLLPAEICKRKYPQPLIRFFEQ 208
G +R L + EI+GAT G YLV W+ DE DL+P+ K PQ LI +F++
Sbjct: 80 GYERGLELAEIVGATDVTGDIKYLVRWQFCDEFDLVPSAQIVEKDPQMLIDYFQK 134
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.132 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 225 193 0.00098 110 3 11 23 0.41 33
31 0.43 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 588 (63 KB)
Total size of DFA: 159 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.83u 0.06s 17.89t Elapsed: 00:00:07
Total cpu time: 17.84u 0.06s 17.90t Elapsed: 00:00:07
Start: Thu Aug 15 12:25:44 2013 End: Thu Aug 15 12:25:51 2013