BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8409
(937 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P35227|PCGF2_HUMAN Polycomb group RING finger protein 2 OS=Homo sapiens GN=PCGF2 PE=1
SV=1
Length = 344
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 130/201 (64%), Gaps = 13/201 (6%)
Query: 18 VCKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMF 77
CKTCIV+YL+ +KYCP+CDV V+KT+PL SIR D LQ++VYKL+PGL++ EM+RR+ F
Sbjct: 38 FCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRRDF 97
Query: 78 FSSTPIQNSLGLTGEDKGIITESSDIILPDENI-SITLEYLAHSSD-----------DIN 125
+++ P+ + ED+G + E L D+ I S+++E+ + D D +
Sbjct: 98 YAAYPLTEVPNGSNEDRGEVLEQEKGALSDDEIVSLSIEFYEGARDRDEKKGPLENGDGD 157
Query: 126 KAVYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQW 185
K G R+LRC A+ V L KFL+NK ++ +K+ VE++ +E L + ++MD+AYIY W
Sbjct: 158 KEKTGVRFLRCPAAMTVMHLAKFLRNKMDVPSKYKVEVLYEDEPLKEYYTLMDIAYIYPW 217
Query: 186 KKKTPMYLGYRILETKIKRIS 206
++ P+ L YR+ + KR++
Sbjct: 218 RRNGPLPLKYRV-QPACKRLT 237
>sp|P25916|BMI1_MOUSE Polycomb complex protein BMI-1 OS=Mus musculus GN=Bmi1 PE=1 SV=1
Length = 324
Score = 169 bits (429), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 137/221 (61%), Gaps = 10/221 (4%)
Query: 18 VCKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMF 77
CKTCIV+YL+ KYCPICDV V+KT+PL +IR D LQ++VYKL+PGL++ EM+RR+ F
Sbjct: 38 FCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDF 97
Query: 78 FSSTPIQNSLGLTGEDKG-IITESSDIILPDENISITLEYLAHSSDD--INK-----AVY 129
+++ P ++ + ED+G + E II DE IS+++E+ S D +NK V
Sbjct: 98 YAAHPSADAANGSNEDRGEVADEEKRIITDDEIISLSIEFFDQSRLDRKVNKEKPKEEVN 157
Query: 130 GRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQWKKKT 189
+RYLRC A+ V L KFL++K ++ N ++++ E L ++MD+AYIY W++
Sbjct: 158 DKRYLRCPAAMTVMHLRKFLRSKMDIPNTFQIDVMYEEEPLKDYYTLMDIAYIYTWRRNG 217
Query: 190 PMYLGYRILET--KIKRISETEEAENSKRLKLSEESNTDNS 228
P+ L YR+ T ++K + + N+ L+ S+ NS
Sbjct: 218 PLPLKYRVRPTCKRMKMSHQRDGLTNAGELESDSGSDKANS 258
>sp|P23798|PCGF2_MOUSE Polycomb group RING finger protein 2 OS=Mus musculus GN=Pcgf2 PE=1
SV=2
Length = 342
Score = 169 bits (428), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 129/201 (64%), Gaps = 13/201 (6%)
Query: 18 VCKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMF 77
CKTCIV+YL+ +KYCP+CDV V+KT+PL SIR D LQ++VYKL+PGL++ EM+RR+ F
Sbjct: 38 FCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRRDF 97
Query: 78 FSSTPIQNSLGLTGEDKGIITESSDIILPDENI-SITLEYLAHSSD-----------DIN 125
+++ P+ + ED+G + E L D+ I S+++E+ D D +
Sbjct: 98 YAAYPLTEVPNGSNEDRGEVLEQEKGALGDDEIVSLSIEFYEGVRDREEKKNLTENGDGD 157
Query: 126 KAVYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQW 185
K G R+LRC A+ V L KFL+NK ++ +K+ VE++ +E L + ++MD+AYIY W
Sbjct: 158 KEKTGVRFLRCPAAMTVMHLAKFLRNKMDVPSKYKVEILYEDEPLKEYYTLMDIAYIYPW 217
Query: 186 KKKTPMYLGYRILETKIKRIS 206
++ P+ L YR+ + KR++
Sbjct: 218 RRNGPLPLKYRV-QPACKRLT 237
>sp|Q32KX7|BMI1_BOVIN Polycomb complex protein BMI-1 OS=Bos taurus GN=BMI1 PE=2 SV=1
Length = 326
Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 132/217 (60%), Gaps = 23/217 (10%)
Query: 18 VCKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMF 77
CKTCIV+YL+ KYCPICDV V+KT+PL +IR D LQ++VYKL+PGL++ EM+RR+ F
Sbjct: 38 FCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDF 97
Query: 78 FSSTPIQNSLGLTGEDKG-IITESSDIILPDENISITLEYLAHSSDD--INK-------A 127
+++ P ++ + ED+G + E II DE IS+++E+ + D INK
Sbjct: 98 YAAHPSADAANGSNEDRGEVADEDKRIITDDEIISLSIEFFDQNRLDRKINKDKEKSKEE 157
Query: 128 VYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQWKK 187
V +RYLRC A+ V L KFL++K ++ N ++++ E L ++MD+AYIY W++
Sbjct: 158 VNDKRYLRCPAAMTVMHLRKFLRSKMDIPNTFQIDVMYEEEPLKDYYTLMDIAYIYTWRR 217
Query: 188 KTPMYLGYRILETKIKRISETEEAENSKRLKLSEESN 224
P+ L YR+ T KR+K+S + +
Sbjct: 218 NGPLPLKYRVRPT-------------CKRMKISHQRD 241
>sp|Q9TST0|BMI1_FELCA Polycomb complex protein BMI-1 OS=Felis catus GN=BMI1 PE=2 SV=1
Length = 326
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 132/217 (60%), Gaps = 23/217 (10%)
Query: 18 VCKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMF 77
CKTCIV+YL+ KYCPICDV V+KT+PL +IR D LQ++VYKL+PGL++ EM+RR+ F
Sbjct: 38 FCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDF 97
Query: 78 FSSTPIQNSLGLTGEDKG-IITESSDIILPDENISITLEYLAHSSDD--INK-------A 127
+++ P ++ + ED+G + E II DE IS+++E+ + D +NK
Sbjct: 98 YAAHPSADAANGSNEDRGEVADEDKRIITDDEIISLSIEFFDQNRLDRKVNKDKEKPKEE 157
Query: 128 VYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQWKK 187
V +RYLRC A+ V L KFL++K ++ N ++++ E L ++MD+AYIY W++
Sbjct: 158 VNDKRYLRCPAAMTVMHLRKFLRSKMDIPNTFQIDVMYEEEPLKDYYTLMDIAYIYTWRR 217
Query: 188 KTPMYLGYRILETKIKRISETEEAENSKRLKLSEESN 224
P+ L YR+ T KR+K+S + +
Sbjct: 218 NGPLPLKYRVRPT-------------CKRMKISHQRD 241
>sp|Q5R8L2|BMI1_PONAB Polycomb complex protein BMI-1 OS=Pongo abelii GN=BMI1 PE=2 SV=1
Length = 326
Score = 167 bits (422), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 132/217 (60%), Gaps = 23/217 (10%)
Query: 18 VCKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMF 77
CKTCIV+YL+ KYCPICDV V+KT+PL +IR D LQ++VYKL+PGL++ EM+RR+ F
Sbjct: 38 FCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDF 97
Query: 78 FSSTPIQNSLGLTGEDKG-IITESSDIILPDENISITLEYLAHSSDD--INK-------A 127
+++ P ++ + ED+G + E II DE IS+++E+ + D +NK
Sbjct: 98 YAAHPSADAANGSNEDRGEVADEDKRIITDDEIISLSIEFFDQNRLDRKVNKDKEKSKEE 157
Query: 128 VYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQWKK 187
V +RYLRC A+ V L KFL++K ++ N ++++ E L ++MD+AYIY W++
Sbjct: 158 VNDKRYLRCPAAMTVMHLRKFLRSKMDIPNTFQIDVMYEEEPLKDYYTLMDIAYIYTWRR 217
Query: 188 KTPMYLGYRILETKIKRISETEEAENSKRLKLSEESN 224
P+ L YR+ T KR+K+S + +
Sbjct: 218 NGPLPLKYRVRPT-------------CKRMKISHQRD 241
>sp|P35226|BMI1_HUMAN Polycomb complex protein BMI-1 OS=Homo sapiens GN=BMI1 PE=1 SV=2
Length = 326
Score = 167 bits (422), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 132/217 (60%), Gaps = 23/217 (10%)
Query: 18 VCKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMF 77
CKTCIV+YL+ KYCPICDV V+KT+PL +IR D LQ++VYKL+PGL++ EM+RR+ F
Sbjct: 38 FCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDF 97
Query: 78 FSSTPIQNSLGLTGEDKG-IITESSDIILPDENISITLEYLAHSSDD--INK-------A 127
+++ P ++ + ED+G + E II DE IS+++E+ + D +NK
Sbjct: 98 YAAHPSADAANGSNEDRGEVADEDKRIITDDEIISLSIEFFDQNRLDRKVNKDKEKSKEE 157
Query: 128 VYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQWKK 187
V +RYLRC A+ V L KFL++K ++ N ++++ E L ++MD+AYIY W++
Sbjct: 158 VNDKRYLRCPAAMTVMHLRKFLRSKMDIPNTFQIDVMYEEEPLKDYYTLMDIAYIYTWRR 217
Query: 188 KTPMYLGYRILETKIKRISETEEAENSKRLKLSEESN 224
P+ L YR+ T KR+K+S + +
Sbjct: 218 NGPLPLKYRVRPT-------------CKRMKISHQRD 241
>sp|Q5SDR3|BMI1_CHICK Polycomb complex protein BMI-1 OS=Gallus gallus GN=BMI1 PE=2 SV=1
Length = 326
Score = 164 bits (414), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 135/222 (60%), Gaps = 12/222 (5%)
Query: 18 VCKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMF 77
CKTCIV+YL+ KYCPICDV V+KT+PL +IR D LQ++VYKL+PGL++ EM+RR+ F
Sbjct: 38 FCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDF 97
Query: 78 FSSTPIQNSLGLTGEDKG-IITESSDIILPDENISITLEYLAHSSDD---------INKA 127
+++ P ++ + ED+G + E II DE IS+++E+ + + +
Sbjct: 98 YAAHPSADAANGSNEDRGEVADEDKRIITDDEIISLSIEFFDQNRLERKGNKEKEKSKEE 157
Query: 128 VYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQWKK 187
V +RYLRC A+ V L KFL++K ++ N ++++ E L ++MD+AYIY W++
Sbjct: 158 VNDKRYLRCPAAMTVMHLRKFLRSKMDIPNTFQIDVMYEEEPLKDYYTLMDIAYIYTWRR 217
Query: 188 KTPMYLGYRILETKIKRISETEEAEN-SKRLKLSEESNTDNS 228
P+ L YR+ T KR+ + E S +L +S +D +
Sbjct: 218 NGPLPLKYRVRPT-CKRMKIGHQREGLSNSGELESDSGSDKA 258
>sp|Q8JIR0|BMI1A_DANRE Polycomb complex protein BMI-1-A OS=Danio rerio GN=bmi1a PE=1 SV=2
Length = 320
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 121/188 (64%), Gaps = 8/188 (4%)
Query: 18 VCKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMF 77
CK CIV+YL+ KYCPICDV V+KTKPL +IR D LQ++VYKL+PGL++ EM+RR+ F
Sbjct: 38 FCKMCIVRYLETSKYCPICDVQVHKTKPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDF 97
Query: 78 FSSTPIQNSLGLTGEDKG-IITESSDIILPDENISITLEYLAH-------SSDDINKAVY 129
++ P ++ + ED+G + E II DE IS+++E+ H + + + V
Sbjct: 98 YAEHPSVDAANGSNEDRGEVADEDKRIITDDEIISLSIEFFDHRAQQQGCTEERQKEEVN 157
Query: 130 GRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQWKKKT 189
+RYL+C A+ V L KFL++K ++ + +E++ +E L ++MD+AYIY W++
Sbjct: 158 NKRYLQCPAAMTVMHLRKFLRSKMDIPPTYQIEVMYEDEPLKDYYTLMDIAYIYTWRRNG 217
Query: 190 PMYLGYRI 197
P+ L YR+
Sbjct: 218 PLPLKYRV 225
>sp|Q640D5|BMI1B_XENLA Polycomb complex protein BMI-1-B OS=Xenopus laevis GN=bmi1b PE=2
SV=1
Length = 323
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 125/198 (63%), Gaps = 11/198 (5%)
Query: 18 VCKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMF 77
CKTCIV+YL+ KYCPICDV V+KT+PL +IR D LQ++VYKL+PGL++ EM+RR+ F
Sbjct: 38 FCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRADKTLQDIVYKLVPGLFKGEMKRRRDF 97
Query: 78 FSSTPIQNSLGLTGEDKG-IITESSDIILPDENISITLEYLAH------SSDDINKA--- 127
+++ P ++ + ED+G + E II DE IS+++E+ S D K+
Sbjct: 98 YAAHPSVDAANGSNEDRGEVADEDKRIITDDEIISLSIEFFDQNRANRKGSKDKEKSKDE 157
Query: 128 VYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQWKK 187
+RYLRC A+ + L KFL++K ++ + ++++ E L ++MD+AYIY W++
Sbjct: 158 ANDKRYLRCPAALTIMHLRKFLRSKMDIPSNFQIDVMYEEEPLKDYYTLMDIAYIYTWRR 217
Query: 188 KTPMYLGYRILETKIKRI 205
P+ L YR+ T KR+
Sbjct: 218 NGPLPLKYRVRPT-CKRV 234
>sp|Q7T3E6|BMI1B_DANRE Polycomb complex protein BMI-1-B OS=Danio rerio GN=bmi1b PE=2 SV=1
Length = 324
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 120/188 (63%), Gaps = 10/188 (5%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
CK CIV+YL+ KYCPICDV V+KTKPL +IR D LQ++VYKL+PGL++ EM+RR+ F+
Sbjct: 39 CKMCIVRYLETSKYCPICDVQVHKTKPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFY 98
Query: 79 SSTPIQNSLGLTGEDKGIIT-ESSDIILPDENISITLEYLAHSSDDIN--------KAVY 129
+ P+ + G + ED+G ++ E II DE IS+++E+ D K V
Sbjct: 99 AEHPVDATNG-SNEDRGEVSDEDKRIIADDEIISLSIEFFDQKKLDGKDGEEKESTKEVT 157
Query: 130 GRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQWKKKT 189
+RYL+C A+ V L KFL++K ++ +E++ +E L ++MD+AYIY W++
Sbjct: 158 VKRYLQCPAAMTVMHLRKFLRSKMDIPCTFQIEVMYEDEPLKDYYTLMDIAYIYTWRRNG 217
Query: 190 PMYLGYRI 197
P+ L YR+
Sbjct: 218 PLPLKYRV 225
>sp|Q91648|BMI1A_XENLA Polycomb complex protein BMI-1-A OS=Xenopus laevis GN=bmi1a PE=1
SV=1
Length = 326
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 119/191 (62%), Gaps = 12/191 (6%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
CKTCIV+YL+ KYCPICDV V+KT+PL +IR D LQ++VYKL+PGL++ EM+RR+ F+
Sbjct: 39 CKTCIVRYLETSKYCPICDVQVHKTRPLLNIRADKTLQDIVYKLVPGLFKGEMKRRRDFY 98
Query: 79 SSTPIQNSLGLTGEDKG-IITESSDIILPDENISITLEYLAHSSDD-----------INK 126
++ P + + ED+G + E II DE IS+++E+ + D
Sbjct: 99 AAHPSADVANGSNEDRGEVADEDKRIITDDEIISLSIEFFDQNKADRKGSKDKDKEKSKD 158
Query: 127 AVYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQWK 186
+ +RYLRC A+ + L KFL++K ++ + ++++ E L ++MD+AYIY W+
Sbjct: 159 EINDKRYLRCPAALTIMHLRKFLRSKMDIPSNFQIDVMYEEEALKDYYTLMDIAYIYTWR 218
Query: 187 KKTPMYLGYRI 197
+ P+ L YR+
Sbjct: 219 RNGPLPLKYRV 229
>sp|P35820|PSC_DROME Polycomb group protein Psc OS=Drosophila melanogaster GN=Psc PE=1
SV=2
Length = 1601
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 113/190 (59%), Gaps = 12/190 (6%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
C +C++ +L++ ++CP C++++ KP +I+ DT LQ +VYKL+PGLYE+E+ R++ F+
Sbjct: 284 CHSCLINHLRKERFCPRCEMVINNAKP--NIKSDTTLQAIVYKLVPGLYERELMRKRAFY 341
Query: 79 SSTPIQNSLGLTGEDKGIITESSDIILPDENISITLEY--LAHSSDDINKAVYGR---RY 133
P + +L T E +G TE I P +++S++LEY L D + RY
Sbjct: 342 KDRPEEAALA-TPEQRGDDTEHL-IFSPSDDMSLSLEYAELGELKTDSEPELVDTLRPRY 399
Query: 134 LRCKASAPVSILHKFLKNKFNL-SNKHCVELVCNNEQ--LTQNISVMDVAYIYQWKKKTP 190
L+C A VS L KF+ +KF + + + ++++ + L ++MD+AYIY WK+ P
Sbjct: 400 LQCPAMCRVSHLKKFVYDKFEIDAQRFSIDIMYKVKTIVLLDYYTLMDIAYIYTWKRDAP 459
Query: 191 MYLGYRILET 200
M YR+ E+
Sbjct: 460 MRFYYRVYES 469
>sp|P25172|SUZ2_DROME Protein suppressor 2 of zeste OS=Drosophila melanogaster GN=Su(z)2
PE=2 SV=2
Length = 1368
Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 112/223 (50%), Gaps = 27/223 (12%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
C++CI+K+L R YCP C K +++ D L++++YKL+PGLY++E + F
Sbjct: 56 CRSCILKHLLRAVYCPECKASGGKEINELNLKSDDTLRSLIYKLVPGLYQRECKELADF- 114
Query: 79 SSTPIQNSLGLTGEDKGIITESSDIILPDENISITLEY---LAHSSDDINKAVYGRRYLR 135
+ L E T+ + E IS++LEY + H V YL+
Sbjct: 115 -----KEQHDLVDEQ---TTDEPEFFTTTELISLSLEYHPAMLHQCGP--GEVPPTIYLQ 164
Query: 136 CKASAPVSILHKFLKNKFNLSNKHC---VELVCNNEQLTQNISVMDVAYIYQWKKKTPMY 192
C A PV +L +FL +K+N+ + VE+ +E L N ++MDVAY Y W +++PM
Sbjct: 165 CAAGLPVELLKRFLCSKYNIETDNGLVEVEVTYKDEVLPTNFTLMDVAYCYNWSRESPMA 224
Query: 193 LGYRIL----------ETKIKRISETEEAENSKRLKLSEESNT 225
YRIL E + RI++ E E+S R S +S T
Sbjct: 225 FCYRILLYDNEQTKNDENNLSRINQDIEPEHSVRRSKSAKSVT 267
>sp|Q9BSM1|PCGF1_HUMAN Polycomb group RING finger protein 1 OS=Homo sapiens GN=PCGF1 PE=1
SV=2
Length = 259
Score = 110 bits (275), Expect = 6e-23, Method: Composition-based stats.
Identities = 64/197 (32%), Positives = 114/197 (57%), Gaps = 20/197 (10%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
CK+CIVKYL+ KYCP+C++ +++T+PL +++ D +Q++VYKL+PGL + E +R + F+
Sbjct: 68 CKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIREFY 127
Query: 79 SSTPIQNSLGLTGEDKGIITESSDIILP--------------DENISITLEYLAHSSDDI 124
S + TGE+ + S++ LP DE +++ LE L+ S D
Sbjct: 128 QSRGLDRVTQPTGEEPAL----SNLGLPFSSFDHSKAHYYRYDEQLNLCLERLS-SGKDK 182
Query: 125 NKAVYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQ 184
NK+V +Y+RC A V L + L ++ L+ +H V+L+ +NE L ++++ +
Sbjct: 183 NKSVLQNKYVRCSVRAEVRHLRRVLCHRLMLNPQH-VQLLFDNEVLPDHMTMKQIWLSRW 241
Query: 185 WKKKTPMYLGYRILETK 201
+ K +P+ L Y + E +
Sbjct: 242 FGKPSPLLLQYSVKEKR 258
>sp|Q6DLV9|PCGF1_RAT Polycomb group RING finger protein 1 (Fragment) OS=Rattus
norvegicus GN=Pcgf1 PE=2 SV=1
Length = 243
Score = 110 bits (274), Expect = 8e-23, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 111/190 (58%), Gaps = 10/190 (5%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
CK+CIVKYL+ KYCP+C++ +++T+PL +++ D +Q++VYKL+PGL + E +R + F+
Sbjct: 56 CKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIRDFY 115
Query: 79 SSTPIQNSLGLTGEDKGI------ITESSDIILPDENISITLEYLAHSSDDINKAVYGRR 132
S + +GE+ + T DE +S+ LE L+ S D NK V +
Sbjct: 116 QSRGLDRVSQPSGEEPALRGLGLPFTSFDHYYRYDEQLSLCLERLS-SGKDKNKNVLQNK 174
Query: 133 YLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQW-KKKTPM 191
Y+RC A V L + L ++ L+ +H V+L+ +NE L +++ M ++ +W K +P+
Sbjct: 175 YVRCSVRAEVRHLRRVLCHRLMLNPQH-VQLLFDNEVLPDHMT-MKQLWLSRWFGKPSPL 232
Query: 192 YLGYRILETK 201
L Y + E +
Sbjct: 233 LLQYSVKEKR 242
>sp|Q2YDF9|PCGF1_BOVIN Polycomb group RING finger protein 1 OS=Bos taurus GN=PCGF1 PE=2
SV=2
Length = 259
Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats.
Identities = 63/197 (31%), Positives = 114/197 (57%), Gaps = 20/197 (10%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
CK+CIVKYL+ KYCP+C++ +++T+PL + + D +Q++VYKL+PGL + E +R + F+
Sbjct: 68 CKSCIVKYLQTSKYCPMCNIKIHETQPLLNHKLDRVMQDIVYKLVPGLQDSEEKRIREFY 127
Query: 79 SSTPIQNSLGLTGEDKGIITESSDIILP--------------DENISITLEYLAHSSDDI 124
S + +GE+ + S++ LP DE +S+ LE L+ S D
Sbjct: 128 QSRGLDRVTQPSGEEPAL----SNLGLPFSSFDHSKAHYYRYDEQLSLCLERLS-SGKDK 182
Query: 125 NKAVYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQ 184
NK++ +Y+RC A V L + L ++ L+ +H V+L+ +NE L ++++ + +
Sbjct: 183 NKSILQNKYVRCSVRAEVRHLRRVLCHRLMLNPQH-VQLLFDNEVLPDHMTMKQIWLSHW 241
Query: 185 WKKKTPMYLGYRILETK 201
+ K +P+ L Y + E +
Sbjct: 242 FGKPSPLLLQYSVKEKR 258
>sp|Q8R023|PCGF1_MOUSE Polycomb group RING finger protein 1 OS=Mus musculus GN=Pcgf1 PE=2
SV=2
Length = 259
Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats.
Identities = 66/198 (33%), Positives = 115/198 (58%), Gaps = 22/198 (11%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
CK+CIVKYL+ KYCP+C++ +++T+PL +++ D +Q++VYKL+PGL + E +R + F+
Sbjct: 68 CKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIREFY 127
Query: 79 SSTPIQNSLGLTGEDKGIITESSDIILP--------------DENISITLEYLAHSSDDI 124
S + +GE+ + S++ LP DE +S+ LE L+ S D
Sbjct: 128 QSRGLDRVSQPSGEEPAL----SNLGLPFSSFDHSKAHYYRYDEQLSLCLERLS-SGKDK 182
Query: 125 NKAVYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQ 184
NK V +Y+RC A V L + L ++ L+ +H V+L+ +NE L +++ M ++ +
Sbjct: 183 NKNVLQNKYVRCSVRAEVRHLRRVLCHRLMLNPQH-VQLLFDNEVLPDHMT-MKQLWLSR 240
Query: 185 W-KKKTPMYLGYRILETK 201
W K +P+ L Y + E +
Sbjct: 241 WFGKPSPLLLQYSVKEKR 258
>sp|Q7ZYZ7|PCGF1_DANRE Polycomb group RING finger protein 1 OS=Danio rerio GN=pcgf1 PE=3
SV=1
Length = 261
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 110/191 (57%), Gaps = 13/191 (6%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
CK+CIVKYL+ KYCP+C++ +++T+PL +++ D +Q++VYKL+PGL E E +R + F+
Sbjct: 66 CKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQESEDKRIKEFY 125
Query: 79 SSTPIQNSLGLTGEDK-----GIITESSD-----IILPDENISITLEYL--AHSSDDINK 126
S ++ + +GE+ G+ S D DE +S+ LE + S D NK
Sbjct: 126 QSRGLERIIQPSGEESVPDNTGLPYTSFDHSKAHFYRYDEQVSLCLERQSSSFSGKDKNK 185
Query: 127 AVYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQWK 186
++++RC A V L K L ++ N+ KH V+++ NNE L ++++ + + +
Sbjct: 186 LTLQQKFVRCSVRAEVRHLRKVLCHRLNVE-KHQVQMLFNNESLPDHMTMKRLWLSHWFG 244
Query: 187 KKTPMYLGYRI 197
K P+ L Y I
Sbjct: 245 KAQPLVLHYTI 255
>sp|Q8BTQ0|PCGF3_MOUSE Polycomb group RING finger protein 3 OS=Mus musculus GN=PcgF3 PE=2
SV=1
Length = 241
Score = 104 bits (259), Expect = 3e-21, Method: Composition-based stats.
Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 36/206 (17%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
C++C+VKYL+ + CP C ++++++ PLQ I D +Q++VYKL+PGL E EM++++ F+
Sbjct: 38 CRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTMQDIVYKLVPGLQEAEMRKQREFY 97
Query: 79 SSTPIQ---------------------------NSLGLTGEDKGIITESSDIILPDENIS 111
++ NS T E+K E +D DE +S
Sbjct: 98 HKLGMEVPGDIKGEACSAKQHLDPRNGETKADDNSNKETAEEKQ--EEDNDYHRSDEQVS 155
Query: 112 ITLEYLAHSSDDINKAVYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLT 171
I LE + + R+++RC A A V L KF+ K NLS+ + ++++CN E L
Sbjct: 156 ICLECNSSKLRGLK-----RKWIRCSAQATVLHLKKFIAKKLNLSSFNELDILCNEEILG 210
Query: 172 QNISVMDVAYIYQWK-KKTPMYLGYR 196
++ + + +W+ KK P+ L YR
Sbjct: 211 KD-HTLKFVVVTRWRFKKAPLLLHYR 235
>sp|Q2KJ29|PCGF3_BOVIN Polycomb group RING finger protein 3 OS=Bos taurus GN=PCGF3 PE=2
SV=1
Length = 242
Score = 100 bits (250), Expect = 4e-20, Method: Composition-based stats.
Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 45/211 (21%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
C++C+VKYL+ + CP C ++++++ PLQ I D +Q++VYKL+PGL E EM++++ F+
Sbjct: 38 CRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTMQDIVYKLVPGLQEAEMRKQREFY 97
Query: 79 SSTPIQNSLGLT--GEDKGIITESSDIILP------------------------------ 106
+ LGL G+ KG + + P
Sbjct: 98 ------HKLGLEVPGDIKGETCSAKQHLDPHRNGETKADDSSNKEAAEEKQEEDGDYHRS 151
Query: 107 DENISITLEYLAHSSDDINKAVYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCN 166
DE +SI LE + + R+++RC A A V L KF+ K NLS+ + ++++CN
Sbjct: 152 DEQVSICLECNSSKLRGLK-----RKWIRCSAQATVLHLKKFIAKKLNLSSFNELDILCN 206
Query: 167 NEQLTQNISVMDVAYIYQWK-KKTPMYLGYR 196
E L ++ + + +W+ KK P+ L YR
Sbjct: 207 EEILGKD-HTLKFVVVTRWRFKKAPLLLHYR 236
>sp|Q3KNV8|PCGF3_HUMAN Polycomb group RING finger protein 3 OS=Homo sapiens GN=PCGF3 PE=1
SV=1
Length = 242
Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats.
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 33/205 (16%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
C++C+VKYL+ + CP C ++++++ PLQ I D +Q++VYKL+PGL E EM++++ F+
Sbjct: 38 CRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTMQDIVYKLVPGLQEAEMRKQREFY 97
Query: 79 SSTPIQNSLGLTGED--------------------------KGIITESSDIILPDENISI 112
++ + GE + E +D DE +SI
Sbjct: 98 HKLGMEVPGDIKGETCSAKQHLDSHRNGETKADDSSNKEAAEEKPEEDNDYHRSDEQVSI 157
Query: 113 TLEYLAHSSDDINKAVYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQ 172
LE + + R+++RC A A V L KF+ K NLS+ + ++++CN E L +
Sbjct: 158 CLECNSSKLRGLK-----RKWIRCSAQATVLHLKKFIAKKLNLSSFNELDILCNEEILGK 212
Query: 173 NISVMDVAYIYQWK-KKTPMYLGYR 196
+ + + +W+ KK P+ L YR
Sbjct: 213 D-HTLKFVVVTRWRFKKAPLLLHYR 236
>sp|Q07G17|PCGF3_XENTR Polycomb group RING finger protein 3 OS=Xenopus tropicalis GN=pcgf3
PE=2 SV=1
Length = 242
Score = 100 bits (248), Expect = 7e-20, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 105/205 (51%), Gaps = 33/205 (16%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
C++C+VKYL+ + CP C ++++++ PLQ I D +Q++VYKL+PGL E EM++++ F+
Sbjct: 38 CRSCLVKYLEENNTCPTCRIVIHQSHPLQYIGHDRTMQDIVYKLVPGLQEAEMRKQREFY 97
Query: 79 SSTPIQ------------------NSLGLTGEDKGI--------ITESSDIILPDENISI 112
++ + G T D+ E D DE +SI
Sbjct: 98 HKLGMEVPGDIKAEILTVKQHVEAHRNGETKTDEHTHKEPPEEKQEEDHDYHRSDEQVSI 157
Query: 113 TLEYLAHSSDDINKAVYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQ 172
LE + + R+++RC A A V L KF+ K NLS+ + ++++CN E L +
Sbjct: 158 CLECNSSKLRGLK-----RKWIRCSAQATVLHLKKFIAKKLNLSSFNELDILCNEEILGK 212
Query: 173 NISVMDVAYIYQWK-KKTPMYLGYR 196
+ + + +W+ KK P+ L YR
Sbjct: 213 D-HTLKFVVVTRWRFKKAPLLLHYR 236
>sp|Q28H21|PCGF1_XENTR Polycomb group RING finger protein 1 OS=Xenopus tropicalis GN=pcgf1
PE=2 SV=1
Length = 259
Score = 99.4 bits (246), Expect = 1e-19, Method: Composition-based stats.
Identities = 55/195 (28%), Positives = 111/195 (56%), Gaps = 14/195 (7%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
CK+CIVKYL+ KYCP+C++ +++T+PL +++ D +Q++VYKL+PGL E E R + F+
Sbjct: 66 CKSCIVKYLQTSKYCPLCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQENEDGRIRDFY 125
Query: 79 SS---------TPIQNSLGLTGE---DKGIITESSDIILPDENISITLEYLAHSSDDINK 126
S + +++S+G + + ++S DE++ + LE ++ S D K
Sbjct: 126 HSRGLERVLQPSAVEDSVGDVSQLSLSLAVSQKTSHYYRNDEHVCLCLEKVS-SGKDKKK 184
Query: 127 AVYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQWK 186
+ ++Y+RC + + L + L ++ + H V+L+ +N+ L ++++ + + +
Sbjct: 185 FILEQKYVRCSVRSEIRHLRRVLSHRLSAPLAH-VQLLIDNKVLPDHMTMKQLWLTHWYG 243
Query: 187 KKTPMYLGYRILETK 201
K P+ L Y + E +
Sbjct: 244 KPAPLVLLYSVREKR 258
>sp|Q4QR06|PCGF1_XENLA Polycomb group RING finger protein 1 OS=Xenopus laevis GN=pcgf1
PE=2 SV=2
Length = 259
Score = 97.4 bits (241), Expect = 5e-19, Method: Composition-based stats.
Identities = 54/195 (27%), Positives = 111/195 (56%), Gaps = 14/195 (7%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
CK+CIVKYL+ KYCP+C++ +++T+PL +++ D +Q++VYKL+PGL E E R + F+
Sbjct: 66 CKSCIVKYLQTSKYCPLCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQENEDSRIRDFY 125
Query: 79 SS---------TPIQNSLGLTGE---DKGIITESSDIILPDENISITLEYLAHSSDDINK 126
S + +++S+G + + ++S DE++ + LE ++ S D K
Sbjct: 126 HSRGLERVLQPSAVEDSVGDVSQLSLSLAVSQKTSHYYRNDEHVCLCLEKVS-SGKDKKK 184
Query: 127 AVYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQWK 186
+ ++Y+RC + + L + L ++ + V+L+ +N+ L ++++ + ++ +
Sbjct: 185 FILQQKYVRCSVRSEIRHLRRVLSHRLSAPLAQ-VQLLIDNKVLPDHMTMKQLWLMHWYG 243
Query: 187 KKTPMYLGYRILETK 201
K P+ L Y + E +
Sbjct: 244 KPAPLVLLYSVKEKR 258
>sp|B3DK16|PCF5A_DANRE Polycomb group RING finger protein 5-A OS=Danio rerio GN=pcgf5a
PE=2 SV=1
Length = 234
Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 24/196 (12%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
CK+CIV++ + CP C + V++T PL+ +R D L+ +++KL+PGL EKE + F+
Sbjct: 39 CKSCIVQHFEESNECPECGIQVHETNPLEMLRLDKTLEEIIFKLVPGLREKEEHQESEFW 98
Query: 79 SSTPIQNSLGLTGEDKGIITESSDIIL------------PDENISITLEYLAHSSDDINK 126
I+++ GED G + S + D I+I L+ L ++
Sbjct: 99 RKHKIKSN----GED-GPRAKKSRLSGEDDDGNGGDYHRSDPQIAICLDCLRNNGQSGES 153
Query: 127 AVYG--RRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQ 184
V G ++++RC V + KFL K L + + ++++CN E + ++ ++ Y +
Sbjct: 154 IVKGLMKKFIRCSTRVTVGTIKKFLCVKLKLPSSYELDVLCNGEIMGKD-HTLEFIYRTR 212
Query: 185 WK----KKTPMYLGYR 196
W+ PM L YR
Sbjct: 213 WRLQGDSAYPMVLEYR 228
>sp|Q99NA9|PCGF6_MOUSE Polycomb group RING finger protein 6 OS=Mus musculus GN=Pcgf6 PE=1
SV=1
Length = 353
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 93/172 (54%), Gaps = 15/172 (8%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
CK+CIV++ CP C+++V++T+PL +IR D +LQ++VYKL+ L E+E ++ F+
Sbjct: 158 CKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFY 217
Query: 79 SS-----------TPIQNSLGLTGEDKGIITESSDIILPDENISITLEYLAHSSDDINKA 127
P+ +S G T + + ES I P+ ++S+ LE++ + D +
Sbjct: 218 KERGLEVPKPAAPQPVPSSKGKTKK----VLESVFRIPPELDMSLLLEFIGANEDTGHFK 273
Query: 128 VYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDV 179
++++R A + + KFL+ K L V+++C + L + ++ ++
Sbjct: 274 PLEKKFVRVSGEATIGHVEKFLRRKMGLDPACQVDIICGDHLLERYQTLREI 325
>sp|Q5XI70|PCGF6_RAT Polycomb group RING finger protein 6 OS=Rattus norvegicus GN=Pcgf6
PE=2 SV=1
Length = 351
Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 91/172 (52%), Gaps = 15/172 (8%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
CK+CIV++ CP C+++V++T+PL +IR D +LQ++VYKL+ L E+E ++ F+
Sbjct: 156 CKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQDIVYKLVVNLEEREKKQMHDFY 215
Query: 79 SS-----------TPIQNSLGLTGEDKGIITESSDIILPDENISITLEYLAHSSDDINKA 127
P+ S G T + ES I P+ ++S+ LE++ + D +
Sbjct: 216 KERGLEVPKPAVPQPVPASKGRTKK----ALESVFRIPPELDVSLLLEFIGANEDTGHFK 271
Query: 128 VYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDV 179
++++R A + + KFL+ K L V+++C + L + ++ ++
Sbjct: 272 PLEKKFVRVSGEATIGHVEKFLRRKMGLDPACQVDIICGDHLLERYQTLREI 323
>sp|Q9BYE7|PCGF6_HUMAN Polycomb group RING finger protein 6 OS=Homo sapiens GN=PCGF6 PE=1
SV=2
Length = 350
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 92/172 (53%), Gaps = 15/172 (8%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
CK+CIV++ CP C+++V++T+PL +IR D +LQ++VYKL+ L E+E ++ F+
Sbjct: 155 CKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFY 214
Query: 79 SS-----------TPIQNSLGLTGEDKGIITESSDIILPDENISITLEYLAHSSDDINKA 127
P+ +S G + + + ES I P+ ++S+ LE++ + +
Sbjct: 215 KERGLEVPKPAVPQPVPSSKGRSKK----VLESVFRIPPELDMSLLLEFIGANEGTGHFK 270
Query: 128 VYGRRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDV 179
++++R A + + KFL+ K L V+++C + L Q ++ ++
Sbjct: 271 PLEKKFVRVSGEATIGHVEKFLRRKMGLDPACQVDIICGDHLLEQYQTLREI 322
>sp|Q1JPS1|PCF5B_DANRE Polycomb group RING finger protein 5-B OS=Danio rerio GN=pcgf5b
PE=2 SV=1
Length = 232
Score = 78.2 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 55/190 (28%), Positives = 98/190 (51%), Gaps = 14/190 (7%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
CK+CIV++ + CP C + V++T PL+ +R D L+ V++KL+PGL EKE Q+ F+
Sbjct: 39 CKSCIVQHFEDSNDCPKCGIQVHETNPLEMLRLDNTLEEVIFKLVPGLREKEQQQEDEFW 98
Query: 79 SSTPIQNSLGLTGEDKGIITESSDIIL-----PDENISITLEYL---AHSSDDINKAVYG 130
+ G + + + E D D I+I L+ L ++I K +
Sbjct: 99 RRKESNDENGPMCKKRRVDEEDDDKGDGDYHRSDPQIAICLDCLRINGQMGENIVKGLM- 157
Query: 131 RRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQWKKKT- 189
++++RC V + KFL K L + + ++++CN E + ++ M+ Y+ +W+ +
Sbjct: 158 KKFIRCSTRVTVGTIKKFLSLKLKLPSSYELDVLCNGEIMGKD-HTMEFIYMTRWRLRGE 216
Query: 190 ---PMYLGYR 196
PM L YR
Sbjct: 217 NVYPMVLEYR 226
>sp|Q3UK78|PCGF5_MOUSE Polycomb group RING finger protein 5 OS=Mus musculus GN=Pcgf5 PE=2
SV=1
Length = 256
Score = 77.0 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 53/179 (29%), Positives = 97/179 (54%), Gaps = 12/179 (6%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
CKTCIV++ + CP C V++T PL+ +R D L+ +++KL+PGL E+E+QR F+
Sbjct: 39 CKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTLEEIIFKLVPGLREQELQRELEFW 98
Query: 79 -SSTPIQNSL-GLTGEDKGIITESSDIILPDEN-------ISITLEYLAHSSDDINKAVY 129
+ P +N ++ DK E D D++ I+I L+ L ++ + V
Sbjct: 99 KKNKPQENGQDDISKVDKSKADEEGDENQDDKDYHRSDPQIAICLDCLRNNGQSGDNVVK 158
Query: 130 G--RRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQWK 186
G ++++RC V + KFL K L + + ++++CN E + ++ M+ Y+ +W+
Sbjct: 159 GLMKKFIRCSTRVTVGTIKKFLSLKLKLPSSYELDVLCNGEIMGKD-HTMEFIYMTRWR 216
>sp|Q86SE9|PCGF5_HUMAN Polycomb group RING finger protein 5 OS=Homo sapiens GN=PCGF5 PE=1
SV=1
Length = 256
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/179 (29%), Positives = 96/179 (53%), Gaps = 12/179 (6%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
CKTCIV++ + CP C V++T PL+ +R D L+ +++KL+PGL E+E++R F+
Sbjct: 39 CKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTLEEIIFKLVPGLREQELERESEFW 98
Query: 79 -SSTPIQNSLGLTGE-DKGIITESSDIIL-------PDENISITLEYLAHSSDDINKAVY 129
+ P +N T + DK + E D D I+I L+ L ++ + V
Sbjct: 99 KKNKPQENGQDDTSKADKPKVDEEGDENEDDKDYHRSDPQIAICLDCLRNNGQSGDNVVK 158
Query: 130 G--RRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQWK 186
G ++++RC V + KFL K L + + ++++CN E + ++ M+ Y+ +W+
Sbjct: 159 GLMKKFIRCSTRVTVGTIKKFLSLKLKLPSSYELDVLCNGEIMGKD-HTMEFIYMTRWR 216
>sp|A0JN86|PCGF5_BOVIN Polycomb group RING finger protein 5 OS=Bos taurus GN=PCGF5 PE=2
SV=1
Length = 255
Score = 71.2 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 49/178 (27%), Positives = 95/178 (53%), Gaps = 11/178 (6%)
Query: 19 CKTCIVKYLKRHKYCPICDVLVYKTKPLQSIRPDTRLQNVVYKLIPGLYEKEMQRRQMFF 78
CKTCIV++ + CP C V++T PL+ +R D L+ +++KL+PGL E+ + + +
Sbjct: 39 CKTCIVQHFEDSNDCPRCGNQVHETNPLEMLRLDNTLEEIIFKLVPGLREQLERESEFWK 98
Query: 79 SSTPIQNSL-GLTGEDKGIITESSDIILPDEN-------ISITLEYLAHSSDDINKAVYG 130
+ P +N ++ DK + E D D++ I+I L+ L ++ + V G
Sbjct: 99 KNKPQENGQDDMSKVDKPKVDEEGDENQDDKDYHRSDPQIAICLDCLRNNGQSGDNVVKG 158
Query: 131 --RRYLRCKASAPVSILHKFLKNKFNLSNKHCVELVCNNEQLTQNISVMDVAYIYQWK 186
++++RC V + KFL K L + + ++++CN E + ++ M+ Y+ +W+
Sbjct: 159 LMKKFIRCSTRVTVGTIKKFLSLKLKLPSSYELDVLCNGEIMGKD-HTMEFIYMTRWR 215
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.123 0.346
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 346,541,275
Number of Sequences: 539616
Number of extensions: 15418802
Number of successful extensions: 118872
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 2422
Number of HSP's that attempted gapping in prelim test: 61305
Number of HSP's gapped (non-prelim): 30166
length of query: 937
length of database: 191,569,459
effective HSP length: 127
effective length of query: 810
effective length of database: 123,038,227
effective search space: 99660963870
effective search space used: 99660963870
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 66 (30.0 bits)