Query psy8415
Match_columns 1561
No_of_seqs 256 out of 515
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 18:14:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8415.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8415hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yin_A DOCK2, dedicator of cyt 100.0 2E-94 6.9E-99 873.7 30.9 390 937-1332 6-433 (436)
2 2wm9_A Dedicator of cytokinesi 100.0 8.6E-79 2.9E-83 737.2 21.5 359 960-1332 4-425 (428)
3 3vhl_A Dedicator of cytokinesi 100.0 4.8E-60 1.7E-64 543.0 14.2 244 1077-1333 6-286 (288)
4 3l4c_A Dedicator of cytokinesi 100.0 5.7E-54 2E-58 467.8 13.8 193 185-377 26-220 (220)
5 2qzq_A Axin interactor, dorsal 93.4 0.31 1E-05 50.7 9.8 108 188-314 16-124 (152)
6 1wfm_A Synaptotagmin XIII; C2 92.1 0.41 1.4E-05 48.4 8.9 93 185-297 25-117 (138)
7 2dmg_A KIAA1228 protein; beta- 91.3 0.43 1.5E-05 48.3 8.0 62 235-297 59-120 (142)
8 3f04_A Synaptotagmin-1; C2A, c 90.7 0.46 1.6E-05 48.1 7.5 58 237-297 70-127 (143)
9 1rsy_A Synaptotagmin I; calciu 89.6 0.73 2.5E-05 47.3 8.0 59 236-297 77-135 (152)
10 2bwq_A Regulating synaptic mem 89.5 1.1 3.9E-05 44.1 9.1 61 235-297 54-116 (129)
11 2cm5_A Rabphilin-3A; protein t 89.0 1.3 4.6E-05 46.0 9.5 60 235-297 73-132 (166)
12 2chd_A Rabphilin-3A, exophilin 88.5 0.91 3.1E-05 45.8 7.7 60 235-297 65-125 (142)
13 2d8k_A Synaptotagmin VII; exoc 88.3 1.2 4.2E-05 44.8 8.5 58 237-297 62-120 (141)
14 3n5a_A Synaptotagmin-7; calciu 88.2 1.3 4.3E-05 44.3 8.4 59 236-297 53-111 (138)
15 1tjx_A Similar to synaptotagmi 86.7 1.9 6.6E-05 44.4 9.0 59 236-297 62-120 (159)
16 1ugk_A Synaptotagmin IV, KIAA1 86.6 2.3 7.8E-05 42.7 9.3 59 236-297 58-117 (138)
17 4fdd_A Transportin-1; heat rep 86.1 92 0.0032 40.3 39.5 318 504-887 394-724 (852)
18 3fbk_A RGS3, RGP3, regulator o 85.9 2.4 8.3E-05 43.5 9.2 59 236-297 63-121 (153)
19 2b3r_A Phosphatidylinositol-4- 85.2 2.6 8.8E-05 42.3 8.8 60 235-297 55-115 (134)
20 2z0u_A WW domain-containing pr 84.2 1.8 6.1E-05 45.0 7.3 59 236-297 81-139 (155)
21 1a25_A CALB, protein kinase C 83.8 3.6 0.00012 41.8 9.4 59 235-297 67-125 (149)
22 3rdl_A Protein kinase C alpha 82.6 4.8 0.00016 39.9 9.5 59 235-297 52-110 (137)
23 3fdw_A Synaptotagmin-like prot 82.1 1.2 3.9E-05 45.5 4.7 60 235-297 60-119 (148)
24 1w15_A Synaptotagmin IV; metal 81.7 0.92 3.2E-05 46.4 3.9 59 236-297 67-125 (153)
25 2r83_A Synaptotagmin-1; C2A-C2 80.6 5.2 0.00018 45.0 9.9 57 237-296 55-111 (284)
26 1v27_A Regulating synaptic mem 79.2 1.4 4.8E-05 44.1 4.2 61 235-297 57-119 (141)
27 3kwu_A MUNC13-1; calcium bindi 76.5 8.8 0.0003 38.7 9.3 57 236-297 49-115 (148)
28 4gcn_A Protein STI-1; structur 76.0 14 0.00049 35.9 10.4 86 971-1078 12-97 (127)
29 1rlw_A Phospholipase A2, CALB 75.9 5 0.00017 39.3 7.0 56 236-297 41-96 (126)
30 2enp_A B/K protein; C2 type 1, 73.9 1.3 4.6E-05 44.9 2.3 58 237-297 69-126 (147)
31 2ifu_A Gamma-SNAP; membrane fu 73.3 22 0.00074 40.0 12.5 127 948-1078 78-209 (307)
32 3m7f_B E3 ubiquitin-protein li 72.7 8.5 0.00029 40.3 8.3 56 236-297 46-101 (176)
33 1elr_A TPR2A-domain of HOP; HO 71.7 26 0.00087 32.3 10.7 87 969-1077 6-92 (131)
34 3ro3_A PINS homolog, G-protein 70.8 69 0.0024 30.3 13.9 109 951-1077 34-142 (164)
35 2dmh_A Myoferlin; beta-sandwic 70.5 7.9 0.00027 38.6 7.1 58 237-297 39-97 (140)
36 1wfj_A Putative elicitor-respo 68.4 3.8 0.00013 40.8 4.2 55 237-297 43-98 (136)
37 1dqv_A Synaptotagmin III; beta 68.2 7.6 0.00026 44.2 7.2 56 236-294 55-110 (296)
38 2wxf_A Phosphatidylinositol-4, 68.1 5.6 0.00019 52.7 6.7 69 246-315 262-340 (940)
39 3hhm_A Phosphatidylinositol-4, 66.4 17 0.00057 48.8 10.6 68 247-315 402-471 (1091)
40 2r83_A Synaptotagmin-1; C2A-C2 65.7 4.3 0.00015 45.7 4.4 59 236-297 187-245 (284)
41 2q3x_A Regulating synaptic mem 65.1 3.5 0.00012 43.2 3.3 56 236-297 68-124 (171)
42 3b7y_A E3 ubiquitin-protein li 64.9 6.3 0.00022 40.0 5.1 57 235-297 57-113 (153)
43 2cjt_A UNC-13 homolog A, MUNC1 62.2 9.8 0.00034 38.1 5.8 53 238-297 34-87 (131)
44 2cjs_A UNC-13 homolog A, MUNC1 61.2 9.5 0.00032 40.1 5.7 53 238-297 43-96 (167)
45 2x19_B Importin-13; nuclear tr 61.2 3.8E+02 0.013 35.0 26.0 53 393-446 550-602 (963)
46 2ifu_A Gamma-SNAP; membrane fu 60.8 41 0.0014 37.7 11.4 50 1025-1076 118-167 (307)
47 1qqe_A Vesicular transport pro 60.3 67 0.0023 35.6 13.0 110 948-1075 59-169 (292)
48 2fk9_A Protein kinase C, ETA t 58.7 6 0.00021 41.3 3.6 53 238-297 74-126 (157)
49 1e7u_A Phosphatidylinositol 3- 57.9 9.7 0.00033 50.6 6.1 70 246-316 264-347 (961)
50 3pyc_A E3 ubiquitin-protein li 56.7 9 0.00031 37.9 4.4 57 236-296 39-95 (132)
51 1djx_A PLC-D1, phosphoinositid 56.0 32 0.0011 43.7 10.2 68 236-313 536-604 (624)
52 3ro3_A PINS homolog, G-protein 54.3 96 0.0033 29.2 11.4 99 961-1076 3-101 (164)
53 1qqe_A Vesicular transport pro 54.1 62 0.0021 35.9 11.3 97 963-1076 33-129 (292)
54 1gmi_A Protein kinase C, epsil 53.2 9.1 0.00031 38.2 3.8 52 239-297 53-104 (136)
55 3q15_A PSP28, response regulat 53.1 1.1E+02 0.0038 34.9 13.6 116 959-1080 254-372 (378)
56 2ep6_A MCTP2 protein; beta san 51.3 6.8 0.00023 38.9 2.5 55 237-297 46-100 (133)
57 4b4t_Q 26S proteasome regulato 51.2 1.3E+02 0.0043 34.6 13.8 109 948-1074 117-226 (434)
58 2l6j_A TPR repeat-containing p 50.8 68 0.0023 28.8 9.2 88 969-1079 6-93 (111)
59 1ash_A Hemoglobin (OXY); oxyge 49.8 46 0.0016 34.5 8.5 43 959-1001 79-128 (150)
60 1na3_A Designed protein CTPR2; 49.7 61 0.0021 28.0 8.4 67 966-1054 8-74 (91)
61 3ma5_A Tetratricopeptide repea 49.4 1.4E+02 0.0048 27.1 11.3 77 968-1067 8-84 (100)
62 3sf4_A G-protein-signaling mod 48.9 1.5E+02 0.0051 33.2 13.6 106 959-1081 259-364 (406)
63 1dqv_A Synaptotagmin III; beta 48.2 4.7 0.00016 46.0 0.8 60 235-297 188-247 (296)
64 2lni_A Stress-induced-phosphop 47.9 83 0.0028 29.0 9.6 79 967-1067 50-128 (133)
65 3u3w_A Transcriptional activat 46.2 1.4E+02 0.0047 32.8 12.5 97 965-1077 113-209 (293)
66 2nq3_A Itchy homolog E3 ubiqui 45.3 17 0.00057 38.4 4.4 55 236-297 68-122 (173)
67 3uq3_A Heat shock protein STI1 45.3 1.2E+02 0.004 31.6 11.2 87 968-1077 6-92 (258)
68 3ro2_A PINS homolog, G-protein 43.9 1.8E+02 0.006 31.2 12.7 103 959-1078 215-317 (338)
69 1rh8_A Piccolo protein; beta-s 43.3 16 0.00055 36.4 3.8 58 237-297 65-123 (142)
70 3gw4_A Uncharacterized protein 42.2 2.7E+02 0.0093 27.7 13.2 38 959-996 58-95 (203)
71 3ulq_A Response regulator aspa 41.6 1.6E+02 0.0056 33.4 12.6 102 959-1076 135-236 (383)
72 3sf4_A G-protein-signaling mod 40.1 2.5E+02 0.0085 31.3 13.7 102 959-1077 219-320 (406)
73 2fbn_A 70 kDa peptidylprolyl i 39.9 84 0.0029 32.2 8.9 95 963-1086 84-178 (198)
74 4a1s_A PINS, partner of inscut 39.9 2.5E+02 0.0086 31.7 13.8 102 959-1077 255-356 (411)
75 2kat_A Uncharacterized protein 39.9 2E+02 0.0069 26.3 10.8 83 968-1073 20-102 (115)
76 3ro2_A PINS homolog, G-protein 39.2 1.8E+02 0.006 31.2 11.8 103 960-1079 36-138 (338)
77 3sz7_A HSC70 cochaperone (SGT) 37.6 77 0.0026 31.4 7.9 23 969-991 13-35 (164)
78 1elw_A TPR1-domain of HOP; HOP 37.4 83 0.0028 28.1 7.5 64 969-1054 6-69 (118)
79 1na0_A Designed protein CTPR3; 37.4 66 0.0023 29.0 6.8 20 971-990 13-32 (125)
80 2y3a_A Phosphatidylinositol-4, 35.9 23 0.0008 47.6 4.6 68 246-314 398-485 (1092)
81 4a1s_A PINS, partner of inscut 35.8 2.4E+02 0.0081 31.9 12.7 101 959-1076 215-315 (411)
82 2qk2_A LP04448P; mini spindles 35.3 2.7E+02 0.0094 29.7 12.5 56 805-860 73-128 (242)
83 2xcb_A PCRH, regulatory protei 35.0 2.3E+02 0.0079 27.2 10.8 67 968-1056 53-119 (142)
84 3q15_A PSP28, response regulat 34.7 2.6E+02 0.0088 31.8 12.8 36 960-995 134-169 (378)
85 3qr0_A Phospholipase C-beta (P 34.3 33 0.0011 44.9 5.5 64 236-313 685-751 (816)
86 2vgx_A Chaperone SYCD; alterna 34.3 98 0.0033 30.7 8.0 23 969-991 23-45 (148)
87 1jf3_A Monomer hemoglobin comp 33.5 1.2E+02 0.0042 30.4 8.6 40 959-998 72-119 (147)
88 2lni_A Stress-induced-phosphop 33.5 67 0.0023 29.6 6.3 79 967-1067 16-94 (133)
89 3u3w_A Transcriptional activat 33.5 1.4E+02 0.0046 32.9 9.8 96 966-1077 154-249 (293)
90 1na0_A Designed protein CTPR3; 33.2 1.3E+02 0.0045 26.9 8.2 64 969-1054 45-108 (125)
91 2xcb_A PCRH, regulatory protei 31.3 1.1E+02 0.0037 29.7 7.6 82 967-1070 18-99 (142)
92 2vyi_A SGTA protein; chaperone 31.2 1.5E+02 0.0052 26.8 8.3 29 1025-1053 82-110 (131)
93 2qfc_A PLCR protein; TPR, HTH, 30.6 1.3E+02 0.0043 33.2 8.9 99 963-1077 151-249 (293)
94 4ga2_A E3 SUMO-protein ligase 30.2 1.8E+02 0.006 28.7 9.1 63 971-1055 35-97 (150)
95 1hxi_A PEX5, peroxisome target 29.5 1.2E+02 0.0041 28.8 7.5 89 962-1072 12-100 (121)
96 2wtg_A Globin-like protein; me 29.4 67 0.0023 33.5 5.9 43 959-1001 83-130 (159)
97 3upv_A Heat shock protein STI1 29.3 1.1E+02 0.0039 28.5 7.2 24 970-993 7-30 (126)
98 2fbn_A 70 kDa peptidylprolyl i 29.0 1.9E+02 0.0065 29.5 9.4 95 967-1071 38-136 (198)
99 2dba_A Smooth muscle cell asso 29.0 1.6E+02 0.0054 27.6 8.3 83 968-1069 29-111 (148)
100 1elr_A TPR2A-domain of HOP; HO 28.2 1.4E+02 0.0047 27.1 7.5 71 968-1053 39-109 (131)
101 1a17_A Serine/threonine protei 28.1 1.3E+02 0.0045 28.9 7.6 24 1029-1052 87-110 (166)
102 3as5_A MAMA; tetratricopeptide 27.9 41 0.0014 32.9 3.9 28 1027-1054 80-107 (186)
103 2vyi_A SGTA protein; chaperone 27.7 1.9E+02 0.0064 26.1 8.3 20 972-991 51-70 (131)
104 3nf1_A KLC 1, kinesin light ch 27.2 3.2E+02 0.011 29.0 11.3 82 961-1056 105-186 (311)
105 3m1i_C Exportin-1; heat repeat 27.0 1.2E+03 0.042 30.7 24.4 37 407-446 585-621 (1049)
106 1xnf_A Lipoprotein NLPI; TPR, 26.8 1.5E+02 0.0052 31.1 8.5 83 963-1067 39-121 (275)
107 3q49_B STIP1 homology and U bo 26.0 1.5E+02 0.0051 27.7 7.4 30 1026-1055 80-109 (137)
108 3edt_B KLC 2, kinesin light ch 26.0 3.7E+02 0.013 27.9 11.3 102 961-1076 79-181 (283)
109 4i17_A Hypothetical protein; T 25.3 2.2E+02 0.0076 29.4 9.3 93 966-1073 75-169 (228)
110 4fdd_A Transportin-1; heat rep 25.0 1.2E+03 0.04 29.8 39.5 76 805-883 602-679 (852)
111 3pt8_B Hemoglobin III; oxygen 24.5 2.2E+02 0.0075 28.7 8.7 43 959-1001 80-127 (152)
112 3gw4_A Uncharacterized protein 24.1 4.1E+02 0.014 26.3 10.8 104 952-1073 92-196 (203)
113 3sz7_A HSC70 cochaperone (SGT) 23.9 2.7E+02 0.0092 27.3 9.2 67 968-1056 46-112 (164)
114 2xev_A YBGF; tetratricopeptide 23.6 2.3E+02 0.0078 26.0 8.2 65 971-1054 6-70 (129)
115 4gco_A Protein STI-1; structur 23.4 1.6E+02 0.0055 28.2 7.2 78 971-1070 17-94 (126)
116 4i17_A Hypothetical protein; T 23.4 2.1E+02 0.0071 29.6 8.6 83 972-1076 47-129 (228)
117 3urz_A Uncharacterized protein 23.0 2.4E+02 0.0082 29.2 9.0 87 962-1070 49-135 (208)
118 2qfc_A PLCR protein; TPR, HTH, 22.6 5E+02 0.017 28.2 11.9 95 965-1076 113-208 (293)
119 2kck_A TPR repeat; tetratricop 22.0 1.4E+02 0.0048 26.3 6.0 62 971-1054 10-71 (112)
120 3upv_A Heat shock protein STI1 22.0 3.7E+02 0.013 24.7 9.3 64 968-1053 39-102 (126)
121 3uq3_A Heat shock protein STI1 21.7 2.4E+02 0.0083 29.0 8.7 65 968-1054 140-204 (258)
122 3edt_B KLC 2, kinesin light ch 21.6 3E+02 0.01 28.6 9.5 79 964-1056 40-118 (283)
123 2ho1_A Type 4 fimbrial biogene 21.4 1.4E+02 0.0047 31.3 6.7 35 959-993 29-63 (252)
124 3qky_A Outer membrane assembly 21.2 3E+02 0.01 29.1 9.6 68 970-1055 151-227 (261)
125 2zkm_X 1-phosphatidylinositol- 20.7 98 0.0034 40.4 6.2 63 237-313 713-779 (799)
126 3rkv_A Putative peptidylprolyl 20.0 3.7E+02 0.013 26.1 9.3 88 965-1080 61-148 (162)
No 1
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=100.00 E-value=2e-94 Score=873.69 Aligned_cols=390 Identities=46% Similarity=0.806 Sum_probs=357.3
Q ss_pred cCCCCcccchhHHHhHHHHHHhhcCChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCC-CCCCCC
Q psy8415 937 QGDENRDKRMSCTVNLLNFYKNEINRKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDP-MCQPNG 1015 (1561)
Q Consensus 937 ~~~E~~d~rm~~tl~Ll~fyk~~~~r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~-~~~~p~ 1015 (1561)
+++|++|+||+||++||+||+ ++++||||++|||+||++|++++||+|||+||++||++|+|+++..+++.. .+.+|+
T Consensus 6 ~~~e~~d~r~~~~~~l~~~y~-~~~~~el~i~~l~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~ 84 (436)
T 2yin_A 6 MTDESKDNRMSCTVNLLNFYK-DNNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHP 84 (436)
T ss_dssp ----CHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC-------------
T ss_pred cCccccchHHHHHHHHHHHHH-hCCChHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCcc
Confidence 358999999999999999999 899999999999999999999999999999999999999999833345443 357899
Q ss_pred CchhhhHHHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHhhccCCCCceeEEEEecC
Q psy8415 1016 APEWYRKEQLYYEIISYFDKGKCWEKGIPLCKELADLYEKRLFDYKKLSNILQTQAQFCDNILNQLRPEPEYFRVGFYGL 1095 (1561)
Q Consensus 1016 qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~I~~~~R~~~~YFRV~FyG~ 1095 (1561)
||+++|||.||++||++|++|++||.||++||+|+++||++++||.+||++|+++|++|++|.+++|++|+||||||||+
T Consensus 85 qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l~k~L~~~yE~~~~Dy~~Ls~~~~~~a~~y~~I~~~~R~~~~YFRV~FyG~ 164 (436)
T 2yin_A 85 QTHRQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIMKILRPKPDYFAVGYYGQ 164 (436)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHSCCCCCCEEEEEEEST
T ss_pred ccHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccceeeEEEEECC
Confidence 99999999999999999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred CCCCCCCCeeEEEccCCccCHHHHHHHHHhhCCCcEEcCCCCCCCCCccCCCccEEEEEEeeecCCCC--CCCCCCCCCC
Q psy8415 1096 SFPLFVRNKVFVYRGLAYERMEAFTQRLQTEFPSANILSKNSPPSHTIQQSDVQYIQICNVKPLPERG--PPCINPPLAP 1173 (1561)
Q Consensus 1096 gFp~~lrnKeFIYrg~~~erL~~f~~RL~~~yp~a~ii~~~~~~d~~~l~~~~qYIQIt~V~P~~d~~--~~~~~~~~~~ 1173 (1561)
|||.+++||+|||||+++|||++|++||+++||+|++|.+.+.|.+++.+++|||||||+|+|++|.. ++ +++
T Consensus 165 ~Fp~~l~~kefIYr~~~~erl~~f~~rl~~~~p~a~~i~~~s~~~~~~~~~~~~yiqIt~V~P~~d~~~~~~-----~~~ 239 (436)
T 2yin_A 165 GFPSFLRNKVFIYRGKEYERREDFQMQLMTQFPNAEKMNTTSAPGDDVKNAPGQYIQCFTVQPVLDEHPRFK-----NKP 239 (436)
T ss_dssp TSCTTTTTEEEEEECCTTCCHHHHHHHHHHHCSSCEECSCCSCCCHHHHHCSSCEEEEEEEEEECCCCGGGS-----SSC
T ss_pred CCCchhcCceEEEeCCCcccHHHHHHHHHHhCCCCEEeccCCCCccccccCCCcEEEEEEeeeecCcchhhc-----cCC
Confidence 99999999999999999999999999999999999999877777778888999999999999999976 44 578
Q ss_pred CCccccceeeecCcceEEEeeeecCCCCCCCcccccceEEEEEEEecCCCCccceeEEEeeeeEE----ec---------
Q psy8415 1174 VPDKIAQYYQVNDVRTFQLDRPMHKGPIDKDNEFKSLWLERTIMTISSPLPGILRWFEVVESNVD----LE--------- 1240 (1561)
Q Consensus 1174 v~~~i~~y~~~~nv~~F~~~~Pf~k~~~~~~~e~~~~w~erTiltT~~~FP~ilrR~eVv~~~~~----IE--------- 1240 (1561)
|++++++|+++||+++|+|++||++++++++|++++||+|||||||+++||||+||++|++++++ ||
T Consensus 240 v~~~i~~f~~~~~~~~F~~~~pf~~~~~~~~~~~~~~w~~rTiltt~~~fP~ilrR~~V~~~~~~~lsPiE~Aie~i~~k 319 (436)
T 2yin_A 240 VPDQIINFYKSNYVQRFHYSRPVRRGTVDPENEFASMWIERTSFVTAYKLPGILRWFEVVHMSQTTISPLENAIETMSTA 319 (436)
T ss_dssp CCHHHHHHHHHSSEEEEEEEEEEECSCCCSSCHHHHEEEEEEEEEEEEEESSSSSEEEEEEEEEEEECHHHHHHHHHHHH
T ss_pred CCccccchhhccCCceEEEeeeeeCCCCCCCchHHhheEEEEEEEECCCCCcceeeeeEeeeeEEEEcHHHHHHHHHHHH
Confidence 99999999999999999999999999877899999999999999999999999999999999887 43
Q ss_pred -------------C------C---CccccccccccchHHHHHHhhcCcccccCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q psy8415 1241 -------------N------P---GLQGTIDANVMGGIAKYQQAFFTPEFARGYPQYIPYINRLHILILEQVDVLENGLV 1298 (1561)
Q Consensus 1241 -------------n------p---~LqG~Vda~VNgG~~~Y~~aFl~~~~~~~~P~~~~~v~~Lk~~~~~~v~vl~~~L~ 1298 (1561)
+ + .|||+|||+|||||.+|+++||++++..+||++.+++++||++|.+|+.+|++||.
T Consensus 320 ~~eL~~~i~~~~~~~~~~~~~Lq~~LqG~V~~~VngG~~~y~~~Fl~~~~~~~~p~~~~~v~~Lk~~~~~~~~~l~~~L~ 399 (436)
T 2yin_A 320 NEKILMMINQYQSDETLPINPLSMLLNGIVDPAVMGGFAKYEKAFFTEEYVRDHPEDQDKLTHLKDLIAWQIPFLGAGIK 399 (436)
T ss_dssp HHHHHHHHHHHHHCSSSCSHHHHHHHHHHHCCSSSCCTHHHHHHHCSHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcchhHHHHHhcccccccccccHHHHHHHhcCchhhhhCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2 89999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCcHHHHHHHHHHHHHHHHhccCCCCc
Q psy8415 1299 VHGQLAPPGVQPLHKRLQERFAGLRQSIRKPPTE 1332 (1561)
Q Consensus 1299 lH~~li~~~~~~~H~~Le~~F~~lk~~l~~~~~~ 1332 (1561)
+|+++|+++|++||++|+++|++|+++|++..+.
T Consensus 400 lh~~li~~~~~~~h~~L~~~f~~l~~~le~~yg~ 433 (436)
T 2yin_A 400 IHEKRVSDNLRPFHDRMEECFKNLKMKVEKEYGV 433 (436)
T ss_dssp HHHHTCCGGGHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 9999999999999999999999999999976554
No 2
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=100.00 E-value=8.6e-79 Score=737.19 Aligned_cols=359 Identities=19% Similarity=0.284 Sum_probs=321.0
Q ss_pred cCChhHHHHHHHHHHHHHccCCChHHHHHHHH----HHHH------HcCccCCC---CCCCCC-------C--CCCCCCc
Q psy8415 960 INRKEMYLRYIYKLHDLHRPADNFTEAGFTLK----LYAD------SLSWTSSA---PLINDP-------M--CQPNGAP 1017 (1561)
Q Consensus 960 ~~r~emyiryv~~La~lH~~~~Ny~EAAl~L~----lhA~------ll~W~~~~---~l~~~~-------~--~~~p~qt 1017 (1561)
.++||||++||++||+.|.+++||+|||+|++ +||+ ++.|+.+. ..|.+. + ..-...|
T Consensus 4 ~~~pdl~~~wl~~La~~h~~~~n~~EAa~cl~~~aaliae~L~~~~~~~~~~~~f~~i~p~~~ee~~~~~d~g~~~~~ft 83 (428)
T 2wm9_A 4 ASTPELRKTWLDSMARIHVKNGDLSEAAMCYVHVTALVAEYLTRKGVFRQGCTAFRVITPNIDEEASMMEDVGMQDVHFN 83 (428)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHTTSSSCCGGGGTTTCGGGGGGC---------CCSSS
T ss_pred cCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhcCCCccchhccccccCCCccccC
Confidence 49999999999999999999999999999999 6777 78897621 112111 0 0112347
Q ss_pred hhhhHHHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHhh----ccCCCCceeEEEEe
Q psy8415 1018 EWYRKEQLYYEIISYFDKGKCWEKGIPLCKELADLYEKRLFDYKKLSNILQTQAQFCDNILN----QLRPEPEYFRVGFY 1093 (1561)
Q Consensus 1018 ~~erKE~L~~~~i~~f~kg~~wE~ai~l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~I~~----~~R~~~~YFRV~Fy 1093 (1561)
+..+|| +|++||++|++|++||.|+++||+|+++||++ +||.+||++|+++|++|++|.+ ++|++|+|||||||
T Consensus 84 e~~l~~-ll~~ai~~f~kg~~~E~ai~~~k~L~~~ye~~-~dy~~Ls~~~~~~a~~y~~I~~~~~~~~R~~~~YfrV~fy 161 (428)
T 2wm9_A 84 EDVLME-LLEQCADGLWKAERYELIADIYKLIIPIYEKR-RDFERLAHLYDTLHRAYSKVTEVMHSGRRLLGTYFRVAFF 161 (428)
T ss_dssp HHHHHH-HHHHHHHHHHHTTCGGGHHHHHTTTHHHHHHT-TCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE
T ss_pred HHHHHH-HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHhhcccCCCcCceeEEEEEE
Confidence 777887 77999999999999999999999999999997 9999999999999999999986 48999999999999
Q ss_pred cCCCCCCCCCeeEEEccCCccCHHHHHHHHHhhCCC------cEEcCCCCCCCCCccCCCccEEEEEEeeecCCCCCCCC
Q psy8415 1094 GLSFPLFVRNKVFVYRGLAYERMEAFTQRLQTEFPS------ANILSKNSPPSHTIQQSDVQYIQICNVKPLPERGPPCI 1167 (1561)
Q Consensus 1094 G~gFp~~lrnKeFIYrg~~~erL~~f~~RL~~~yp~------a~ii~~~~~~d~~~l~~~~qYIQIt~V~P~~d~~~~~~ 1167 (1561)
|+|||.+++||+|||||+++|+|++|++||+++||+ ++||+++++|++++++++++|||||+|+|+++..
T Consensus 162 G~~fp~~l~~kefIYr~~~~e~l~~f~~rl~~~yp~~~g~~~~~ii~~s~~~~~~~l~~~~~yiqIt~V~P~~~~~---- 237 (428)
T 2wm9_A 162 GQGFFEDEDGKEYIYKEPKLTPLSEISQRLLKLYSDKFGSENVKMIQDSGKVNPKDLDSKYAYIQVTHVIPFFDEK---- 237 (428)
T ss_dssp CHHHHGGGTTCEEEEEESTTCCHHHHHHHHHHHHHHHHCGGGEEEECCCSCCCGGGSCTTSEEEEEEEEEECCCHH----
T ss_pred cCCCChhccCCeEEEeCCCCccHHHHHHHHHHhCccccCccceeeccCCCCCChhhcCCCCcEEEEEEEEecCCcc----
Confidence 999999999999999999999999999999999994 8999999999999999999999999999999864
Q ss_pred CCCCCCCCccccceeeecCcceEEEeeeecCCCCCCCcccccceEEEEEEEecCCCCccceeEEEeeeeEE----ec---
Q psy8415 1168 NPPLAPVPDKIAQYYQVNDVRTFQLDRPMHKGPIDKDNEFKSLWLERTIMTISSPLPGILRWFEVVESNVD----LE--- 1240 (1561)
Q Consensus 1168 ~~~~~~v~~~i~~y~~~~nv~~F~~~~Pf~k~~~~~~~e~~~~w~erTiltT~~~FP~ilrR~eVv~~~~~----IE--- 1240 (1561)
+++++++.|++++|+++|.|++||++++++ +|++++||+|||+|+|+++||||+||++|++++++ ||
T Consensus 238 -----~~~~~~~~f~~~~~v~~F~~~~pf~~~~k~-~g~~~~~w~~rti~~t~~~fP~il~R~~V~~~~~~~lsPiE~Ai 311 (428)
T 2wm9_A 238 -----ELQERKTEFERSHNIRRFMFEMPFTQTGKR-QGGVEEQCKRRTILTAIHCFPYVKKRIPVMYQHHTDLNPIEVAI 311 (428)
T ss_dssp -----HHHHCCSTGGGSSSEEEEEEEEEECTTSCS-SCCTTTCEEEEEEEEEEEEESCSSSEEEEEEEEEEEECHHHHHH
T ss_pred -----ccccccccceecCCcCeEEEecceecCCCC-CCcHHhheEEEEEEEecCCCCCceeeeEEEEEEEEEECHHHHHH
Confidence 788899999999999999999999999884 68999999999999999999999999999999987 33
Q ss_pred -------------------C--C---CccccccccccchHHHHHHhhcCcccccCCCCChHHHHHHHHHHHHHHHHHHHH
Q psy8415 1241 -------------------N--P---GLQGTIDANVMGGIAKYQQAFFTPEFARGYPQYIPYINRLHILILEQVDVLENG 1296 (1561)
Q Consensus 1241 -------------------n--p---~LqG~Vda~VNgG~~~Y~~aFl~~~~~~~~P~~~~~v~~Lk~~~~~~v~vl~~~ 1296 (1561)
| + .|||+|||+|||||.+|+++||++++..+||++ ++++||++|.+|+.+|++|
T Consensus 312 e~i~~k~~eL~~~~~~~~~d~~~L~~~LqG~v~~~Vn~G~~~y~~~Fl~~~~~~~~~~~--~v~~Lk~~~~~~~~~~~~~ 389 (428)
T 2wm9_A 312 DEMSKKVAELRQLCSSAEVDMIKLQLKLQGSVSVQVNAGPLAYARAFLDDTNTKRYPDN--KVKLLKEVFRQFVEACGQA 389 (428)
T ss_dssp HHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHSCSSSCCTHHHHHHHSCC-------CT--THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCHHHHHHHhcccccCccCCcHHHHHHHHcCCcccccCCHH--HHHHHHHHHHHHHHHHHHH
Confidence 1 1 899999999999999999999999999999976 7999999999999999999
Q ss_pred HHHhccCCCCCcHHHHHHHHHHHHHHHHhccCCCCc
Q psy8415 1297 LVVHGQLAPPGVQPLHKRLQERFAGLRQSIRKPPTE 1332 (1561)
Q Consensus 1297 L~lH~~li~~~~~~~H~~Le~~F~~lk~~l~~~~~~ 1332 (1561)
|.+|+++|+++|++||++|+++|++|+++|++++++
T Consensus 390 L~lh~~~~~~~~~~~h~~le~~f~~l~~~l~~~~~~ 425 (428)
T 2wm9_A 390 LAVNERLIKEDQLEYQEEMKANYREMAKELSEIMHE 425 (428)
T ss_dssp HHHHHHHCCSTTTHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHhhhhCChhHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999998875
No 3
>3vhl_A Dedicator of cytokinesis protein 8; signal transduction, guanine nucleotide exchang factor, GTPA signaling protein; 2.08A {Mus musculus}
Probab=100.00 E-value=4.8e-60 Score=543.00 Aligned_cols=244 Identities=22% Similarity=0.326 Sum_probs=213.0
Q ss_pred HhhccCCCCceeEEEEecCCCCCCCCCeeEEEccCCccCHHHHHHHHHhhCC------CcEEcCCCCCCCCCccCCCccE
Q psy8415 1077 ILNQLRPEPEYFRVGFYGLSFPLFVRNKVFVYRGLAYERMEAFTQRLQTEFP------SANILSKNSPPSHTIQQSDVQY 1150 (1561)
Q Consensus 1077 I~~~~R~~~~YFRV~FyG~gFp~~lrnKeFIYrg~~~erL~~f~~RL~~~yp------~a~ii~~~~~~d~~~l~~~~qY 1150 (1561)
+.+++|++|+||||||||.|||. +|||+|||||+++|+|++|++||+++|| +|+||+++++||++++++++||
T Consensus 6 ~~~~~R~~~~YFRV~FyG~~Fp~-lr~KefIYrg~~~e~l~~f~~Rl~~~yp~~~G~~~a~ii~~s~~~~~~~~~~~~~y 84 (288)
T 3vhl_A 6 SGDHKRMFGTYFRVGFYGSRFGD-LDEQEFVYKEPAITKLPEISHRLEGFYGQCFGAEFVEVIKDSTPVDKTKLDPNKAY 84 (288)
T ss_dssp -------CCEEEEEEEESGGGGG-GTTCEEEEEESSSCCHHHHHHHHHHHHHHHHCGGGEEEECSCSCCCGGGSCTTSEE
T ss_pred cCCCCccCceeEEEEEECCCCcc-ccCcEEEEcCCCCccHHHHHHHHHHhCccccCCcceEEecCCCCCChhhcCCCCcE
Confidence 45679999999999999999997 9999999999999999999999999999 5799999999999999999999
Q ss_pred EEEEEeeecCCCCCCCCCCCCCCCCccccceeeecCcceEEEeeeecCCCCCCCcccccceEEEEEEEecCCCCccceeE
Q psy8415 1151 IQICNVKPLPERGPPCINPPLAPVPDKIAQYYQVNDVRTFQLDRPMHKGPIDKDNEFKSLWLERTIMTISSPLPGILRWF 1230 (1561)
Q Consensus 1151 IQIt~V~P~~d~~~~~~~~~~~~v~~~i~~y~~~~nv~~F~~~~Pf~k~~~~~~~e~~~~w~erTiltT~~~FP~ilrR~ 1230 (1561)
||||+|+|++|.. +|++++++|++++|+++|+|++||+++|+ ++|++++||+|||+|+|+++||||+||+
T Consensus 85 iqIt~V~P~~~~~---------~v~~~i~~f~~~~nv~~F~~~~pf~k~g~-~~~~~~~~w~ertiltt~~~fP~ilrR~ 154 (288)
T 3vhl_A 85 IQITFVEPYFDEY---------EMKDRVTYFEKNFNLRRFMYTTPFTLEGR-PRGELHEQHRRNTVLTTMHAFPYIKTRI 154 (288)
T ss_dssp EEEEEEEECCCHH---------HHC---------CCEEEEEEEEEECTTSS-SCCCGGGCEEEEEEEEEEEEESCSSSEE
T ss_pred EEEEEEEEecccc---------ccchhhceeeeccCcceEEEeeeEecCCC-CCcchhhhEEEEEEEEEcCCCCCceEEE
Confidence 9999999999864 78999999999999999999999999987 5789999999999999999999999999
Q ss_pred EEeeeeEE----ec----------------------CC-----CccccccccccchHHHHHHhhcCcccccCCCCChHHH
Q psy8415 1231 EVVESNVD----LE----------------------NP-----GLQGTIDANVMGGIAKYQQAFFTPEFARGYPQYIPYI 1279 (1561)
Q Consensus 1231 eVv~~~~~----IE----------------------np-----~LqG~Vda~VNgG~~~Y~~aFl~~~~~~~~P~~~~~v 1279 (1561)
+|++++++ || |+ .|||+|||+|||||.+|+++||++. ..+|.+.+++
T Consensus 155 eV~~~~~v~lSPiE~Aie~i~~k~~eL~~~~~~~~~d~~~L~~~L~G~Vd~~VngG~~~y~~~Fl~~~--~~~~~~~~~v 232 (288)
T 3vhl_A 155 RVSQKEEFVLTPIEVAIEDMKKKTLQLAVATHQEPPDAKMLQMVLQGSVGATVNQGPLEVAQVFLAEI--PADPKLYRHH 232 (288)
T ss_dssp EEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHCCSSSCCHHHHHHHHTSSC--CSSHHHHHHH
T ss_pred EEEEEeEEEEchHHHHHHHHHHHHHHHHHHHhccCCChHHHHHhhheEeccccccCHHHHHHHHcCCc--ccChhhHHHH
Confidence 99999887 43 11 9999999999999999999999983 3455566789
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHhccCCCCcc
Q psy8415 1280 NRLHILILEQVDVLENGLVVHGQLAPPGVQPLHKRLQERFAGLRQSIRKPPTES 1333 (1561)
Q Consensus 1280 ~~Lk~~~~~~v~vl~~~L~lH~~li~~~~~~~H~~Le~~F~~lk~~l~~~~~~~ 1333 (1561)
++||++|.+|+.+|++||.+|+++|+++|++||++|+++|++|+++|++++++.
T Consensus 233 ~~Lk~~~~~~~~~l~~~L~lh~~li~~~~~~~h~~L~~~F~~l~~~l~~l~~~~ 286 (288)
T 3vhl_A 233 NKLRLCFKEFIMRCGEAVEKNRRLITAEQREYQQELKKNYNKLRDSLRPMIERK 286 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999988754
No 4
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=100.00 E-value=5.7e-54 Score=467.81 Aligned_cols=193 Identities=40% Similarity=0.701 Sum_probs=161.5
Q ss_pred cceeeEEeecccccCCCCCCCCceEEEEEEEcCCCccccCceeccCCCCCcceEEEEEEEecCCCccceeEEEeeccccc
Q psy8415 185 RNDLYLILERGEFEKGGKSTGKNIEVTVQVLDSDGTVLQNCLWGASGSDTSSEYHSMIIYHHNSPCWSEIIRLAVPIERY 264 (1561)
Q Consensus 185 RNdLYVtl~~g~F~~~~k~~arNIeV~vevr~~dg~~i~~~I~~~sg~~~~s~~~S~V~yHn~~P~w~EeIKi~LP~~~~ 264 (1561)
||||||||++|+|++++++++|||||+|+||+++|+.+++|||+++|++++++|+|+|+|||++|.|+|||||+||++++
T Consensus 26 RNdLYVtl~~g~F~~~~k~~aRNIeV~vevr~~~G~~i~~~I~~~sg~~~~se~~S~V~YHnk~P~w~EtIKi~LP~~~~ 105 (220)
T 3l4c_A 26 RNDIYVTLVQGDFDKGSKTTAKNVEVTVSVYDEDGKRLEHVIFPGAGDEAISEYKSVIYYQVKQPRWFETVKVAIPIEDV 105 (220)
T ss_dssp CEEEEEEEEEEECCCSSSSSCCCEEEEEEEEETTSCBCCSCEECTTCCSCBSCEECCCCTTCSSCCCCEEEEEEECTTSS
T ss_pred cccEEEEeeEeEECCCCCCCcceEEEEEEEEcCCCCCcccCEEcCCCCCCceeEEEEEEEcCCCCCceEeEEEeeChhhc
Confidence 99999999999999998999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEEEEeeccccccccC-CcceEEEEeeccCCCCceecCCceEEEEEeecccCCCCCCccccCCcchhhhccCCCCC
Q psy8415 265 QSSHIRLEYRHCSTRDKADN-KKLLGFSFARLMEPSGATLQDCQHELFIYRCEERSKLDPGHYLGLASTVQEAQAGTVPI 343 (1561)
Q Consensus 265 ~~~HLlFtFrH~S~~~k~~~-~~pfg~a~lPL~~~~g~~l~DG~h~L~Vyk~d~~~~~~p~~YL~lp~~~~~~~~~~~~~ 343 (1561)
++|||+||||||||++++|. ++||||||||||++||++|+||+|+|+|||+|.++..++..||+||+++.+..++..+.
T Consensus 106 ~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~~dG~~L~DG~H~L~vyk~d~~~~~~~~~yl~lp~~~~~~~~~~~~~ 185 (220)
T 3l4c_A 106 NRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMRYDGTTLRDGEHDLIVYKAEAKKLEDAATYLSLPSTKAELEEKGHSA 185 (220)
T ss_dssp TTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBCTTSCBCCSEEEEEEEEECCHHHHTCHHHHTTSCCBHHHHHTC----
T ss_pred CCeEEEEEEEEecccccccccCCeeEEEEEEcccCCCcEEccCCEEEEEEEcccccccchhhhccCCCchhhhccccccc
Confidence 99999999999999887652 58999999999998899999999999999999877777789999999887664422111
Q ss_pred C-CCCCCccccccCCceEEEEEEEeeccccchhhH
Q psy8415 344 P-YKTDSAHYACSHKESVFIRTLLCSTKLTQNVEI 377 (1561)
Q Consensus 344 p-~~~~~~~~~~~~k~~f~I~T~lcST~~TQd~~L 377 (1561)
. ..........+.||+|+|+|.|||||+|||++|
T Consensus 186 ~~~~~~~~~~~~~~kd~f~i~t~lCSTkLTQNvdl 220 (220)
T 3l4c_A 186 TGKSMQSLGSCTISKDSFQISTLVCSTKLTQNVDL 220 (220)
T ss_dssp ---CCCEETTEEEEEEEEEEEEEEC----------
T ss_pred cccccccccccCCCcCeEEEEeEEEecccccCCCC
Confidence 1 111122345679999999999999999999986
No 5
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=93.38 E-value=0.31 Score=50.69 Aligned_cols=108 Identities=19% Similarity=0.263 Sum_probs=72.6
Q ss_pred eeEEeecccccCCCCCCCCceEEEEEEEcCCCccccCceeccCCCCCcceEEEEEEEecCCCccceeEEEeeccc-cccC
Q psy8415 188 LYLILERGEFEKGGKSTGKNIEVTVQVLDSDGTVLQNCLWGASGSDTSSEYHSMIIYHHNSPCWSEIIRLAVPIE-RYQS 266 (1561)
Q Consensus 188 LYVtl~~g~F~~~~k~~arNIeV~vevr~~dg~~i~~~I~~~sg~~~~s~~~S~V~yHn~~P~w~EeIKi~LP~~-~~~~ 266 (1561)
|.|.+++..+.. .+.-.+=-++|.|+|.+|..++...-...|....+.| | .|+-+|.|+-|.+ +-++
T Consensus 16 l~v~Ie~iglkd--a~~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~y---v-------~f~~~v~lqtple~lp~G 83 (152)
T 2qzq_A 16 LTLTIEKIGLKD--AGQCIDPYITVSVKDLNGIDLNPVQDTPVATRKEDTY---I-------HFSVDVEIQRHLEKLPKG 83 (152)
T ss_dssp EEEEEEEEECTT--GGGCEEEEEEEEEECTTSCBSSCCEECCCCCEECSSE---E-------EEEEEEECSSCGGGSCTT
T ss_pred EEEEEEEEEeCC--HHHccCCeEEEEEEcCCCCCccccccCCCcceecCCe---E-------EEeeEEEeeCcHHHCCCC
Confidence 445555555533 2234556788999999999886555333331111222 2 2667888888855 4557
Q ss_pred cEEEEEEeeccccccccCCcceEEEEeeccCCCCceecCCceEEEEEe
Q psy8415 267 SHIRLEYRHCSTRDKADNKKLLGFSFARLMEPSGATLQDCQHELFIYR 314 (1561)
Q Consensus 267 ~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~~~g~~l~DG~h~L~Vyk 314 (1561)
+=++|.|+|-+.++++- ..-+|||+++=+ |..|.-.+.+|+
T Consensus 84 ~aivfElkH~k~kkkk~--S~kCw~f~~~d~-----i~~g~~~lElY~ 124 (152)
T 2qzq_A 84 AAIFFEFKHYKPKKRFT--STKCFAFMEMDE-----IKPGPIVIELYK 124 (152)
T ss_dssp CEEEEEEEEEETTTTEE--EEEEEEEEEGGG-----CCSEEEEECCEE
T ss_pred cEEEEEEEEecccceee--eeeeEEEEEhhh-----cccCceeeehhc
Confidence 89999999997766543 678999999543 667888999998
No 6
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=92.13 E-value=0.41 Score=48.44 Aligned_cols=93 Identities=17% Similarity=0.232 Sum_probs=63.5
Q ss_pred cceeeEEeecccccCCCCCCCCceEEEEEEEcCCCccccCceeccCCCCCcceEEEEEEEecCCCccceeEEEeeccccc
Q psy8415 185 RNDLYLILERGEFEKGGKSTGKNIEVTVQVLDSDGTVLQNCLWGASGSDTSSEYHSMIIYHHNSPCWSEIIRLAVPIERY 264 (1561)
Q Consensus 185 RNdLYVtl~~g~F~~~~k~~arNIeV~vevr~~dg~~i~~~I~~~sg~~~~s~~~S~V~yHn~~P~w~EeIKi~LP~~~~ 264 (1561)
...|.|++.++. ... ....-+--|+|.+..+++ ...++|.|...+.+|.|+|++.+.+|.+..
T Consensus 25 ~~~L~V~v~~a~-~~d-~~g~sDPyv~v~l~~~~~---------------~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l 87 (138)
T 1wfm_A 25 KAELFVTRLEAV-TSN-HDGGCDCYVQGSVANRTG---------------SVEAQTALKKRQLHTTWEEGLVLPLAEEEL 87 (138)
T ss_dssp TTEEEEEEEEEE-CCC-CSSCCCEEEEEEEEETTE---------------EEEEECCCCCCCSSEECSSCEEEECCTTSS
T ss_pred CCEEEEEEEEEE-cCC-CCCCcceEEEEEEEcCCC---------------cccEecccCcCCCCCcCCceEEEEecHHHc
Confidence 556777777766 211 112234455555432111 235788888889999999999999998888
Q ss_pred cCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 265 QSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 265 ~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
....|.|+.++...- .++ ..+|-+.+||-.
T Consensus 88 ~~~~L~~~V~d~d~~-~~d--d~lG~~~i~l~~ 117 (138)
T 1wfm_A 88 PTATLTLTLRTCDRF-SRH--SVAGELRLGLDG 117 (138)
T ss_dssp TTCEEEEEEEECCSS-CTT--SCSEEEEEESSS
T ss_pred CCCEEEEEEEECCCC-CCC--cEEEEEEEEccc
Confidence 889999999876422 223 689999999875
No 7
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.34 E-value=0.43 Score=48.26 Aligned_cols=62 Identities=16% Similarity=0.234 Sum_probs=48.5
Q ss_pred cceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 235 SSEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 235 ~s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
...++|.|...+.+|.|+|++.+.++.+......|.|+.++...-.+++ ...+|-+.+||-.
T Consensus 59 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~-~~~iG~~~i~l~~ 120 (142)
T 2dmg_A 59 SGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGFLSKD-KGLLGKVLVALAS 120 (142)
T ss_dssp SSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCCSSCCS-CCCCEEEEEECCC
T ss_pred CCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCCccccC-CcEEEEEEEeccc
Confidence 3568888988999999999999999887777779999988765322221 2578999999854
No 8
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=90.71 E-value=0.46 Score=48.12 Aligned_cols=58 Identities=9% Similarity=0.178 Sum_probs=47.6
Q ss_pred eEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 237 EYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 237 ~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
.++|.|..++.+|.|+|++.+.++........|.|+.++...-. ++ ..+|-+.+||-.
T Consensus 70 ~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~-~~--~~iG~~~i~l~~ 127 (143)
T 3f04_A 70 KFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFS-KH--DIIGEFKVPMNT 127 (143)
T ss_dssp CEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSS-CC--EEEEEEEEEGGG
T ss_pred cEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCCCC-CC--ceEEEEEEEHHH
Confidence 47888888899999999999999988777889999988764322 22 789999999864
No 9
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=89.62 E-value=0.73 Score=47.28 Aligned_cols=59 Identities=8% Similarity=0.176 Sum_probs=47.6
Q ss_pred ceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 236 SEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 236 s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
..++|.|...+.+|.|+|++.+.++.+......|.|+.++...-. ++ ..+|-+.+||-.
T Consensus 77 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~-~~--~~iG~~~i~l~~ 135 (152)
T 1rsy_A 77 KKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFS-KH--DIIGEFKVPMNT 135 (152)
T ss_dssp SCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSS-CC--EEEEEEEEEGGG
T ss_pred ceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCCCC-CC--cEEEEEEEEchh
Confidence 357888888889999999999999987777889999988764322 23 789999999875
No 10
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=89.53 E-value=1.1 Score=44.15 Aligned_cols=61 Identities=10% Similarity=0.220 Sum_probs=46.5
Q ss_pred cceEEEEEEEecCCCccceeEEEe-eccccccCcEEEEEEeecccccc-ccCCcceEEEEeeccC
Q psy8415 235 SSEYHSMIIYHHNSPCWSEIIRLA-VPIERYQSSHIRLEYRHCSTRDK-ADNKKLLGFSFARLME 297 (1561)
Q Consensus 235 ~s~~~S~V~yHn~~P~w~EeIKi~-LP~~~~~~~HLlFtFrH~S~~~k-~~~~~pfg~a~lPL~~ 297 (1561)
...++|.|...+.+|.|+|++.+. ++.+......|.|+.++.....+ ++ ..+|-+.+||-+
T Consensus 54 ~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d~~~~~~~--~~lG~~~i~l~~ 116 (129)
T 2bwq_A 54 KNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEES--EFLGEILIELET 116 (129)
T ss_dssp GGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC-------C--EEEEEEEEEGGG
T ss_pred CcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECCcCcCcCC--ceeEEEEEEccc
Confidence 456889999999999999999999 56666777899999887654322 13 789999999875
No 11
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=88.96 E-value=1.3 Score=45.99 Aligned_cols=60 Identities=8% Similarity=0.093 Sum_probs=48.3
Q ss_pred cceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 235 SSEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 235 ~s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
...++|.|...+.+|.|+|++.+.++.+......|.|+.++...- .++ ..+|-+.+||-.
T Consensus 73 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~-~~~--~~iG~~~i~l~~ 132 (166)
T 2cm5_A 73 KAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIG-KSN--DYIGGCQLGISA 132 (166)
T ss_dssp CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSS-SCC--EEEEEEEEETTC
T ss_pred cceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCCC-CCC--cEEEeEEEeccc
Confidence 456888898999999999999999998777788999998876432 122 678999888864
No 12
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=88.51 E-value=0.91 Score=45.82 Aligned_cols=60 Identities=15% Similarity=0.304 Sum_probs=48.1
Q ss_pred cceEEEEEEEecCCCccceeEEEe-eccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 235 SSEYHSMIIYHHNSPCWSEIIRLA-VPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 235 ~s~~~S~V~yHn~~P~w~EeIKi~-LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
...++|.|...+.+|.|+|++.+. ++.+......|.|+.++...-. ++ ..+|-+.+||-.
T Consensus 65 ~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~-~d--~~iG~~~i~l~~ 125 (142)
T 2chd_A 65 SNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDKFG-HN--EFIGETRFSLKK 125 (142)
T ss_dssp GGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEECTTS-CE--EEEEEEEEEGGG
T ss_pred cceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECCCCC-CC--cEEEEEEEEHHH
Confidence 456889999999999999999998 8877666789999988764322 23 689999999875
No 13
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.26 E-value=1.2 Score=44.83 Aligned_cols=58 Identities=14% Similarity=0.220 Sum_probs=45.8
Q ss_pred eEEEEEEEecCCCccceeEEEe-eccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 237 EYHSMIIYHHNSPCWSEIIRLA-VPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 237 ~~~S~V~yHn~~P~w~EeIKi~-LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
.++|.|...+.+|.|+|++.+. +|.+......|.|+.++...-. ++ ..+|-+.+||-.
T Consensus 62 ~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~-~~--~~iG~~~i~l~~ 120 (141)
T 2d8k_A 62 KLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFS-RN--DPIGEVSIPLNK 120 (141)
T ss_dssp EEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCSSS-SC--EEEEEEEEETTT
T ss_pred cEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCCCC-CC--cEEEEEEEEhhh
Confidence 5788888888999999999998 4766667788999988764321 23 789999999875
No 14
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=88.24 E-value=1.3 Score=44.26 Aligned_cols=59 Identities=10% Similarity=0.228 Sum_probs=47.6
Q ss_pred ceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 236 SEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 236 s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
..++|.|...+.+|.|+|++.+.++.+......|.|+.++..... ++ ..+|-+.+||-.
T Consensus 53 ~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~~~-~~--~~lG~~~i~l~~ 111 (138)
T 3n5a_A 53 EKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDKLS-RN--DVIGKIYLSWKS 111 (138)
T ss_dssp EEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECCSSS-CC--EEEEEEEESSSS
T ss_pred ceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECCCCC-CC--cEEEEEEEcccc
Confidence 457788888899999999999999988888889999988754322 22 688999998864
No 15
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=86.66 E-value=1.9 Score=44.35 Aligned_cols=59 Identities=15% Similarity=0.247 Sum_probs=47.5
Q ss_pred ceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 236 SEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 236 s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
..++|.|...+.+|.|+|++.+.++.+......|.|+.++...-. ++ ..+|-+.+||-.
T Consensus 62 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~-~~--~~iG~~~i~l~~ 120 (159)
T 1tjx_A 62 KKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIG-KN--DAIGKVFVGYNS 120 (159)
T ss_dssp EEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCSSS-CC--EEEEEEEEETTC
T ss_pred ceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCCCC-CC--ceEEEEEECCCC
Confidence 457888888889999999999999988777788999988764322 22 688999999864
No 16
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=86.59 E-value=2.3 Score=42.67 Aligned_cols=59 Identities=12% Similarity=0.235 Sum_probs=47.9
Q ss_pred ceEEEEEEEecCCCccceeEEEe-eccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 236 SEYHSMIIYHHNSPCWSEIIRLA-VPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 236 s~~~S~V~yHn~~P~w~EeIKi~-LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
..++|.|...+.+|.|+|++.+. +|.+......|.|+.++...- .++ ..+|-+.+||-.
T Consensus 58 ~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~~-~~~--~~lG~~~i~l~~ 117 (138)
T 1ugk_A 58 HKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRF-SRD--DIIGEVLIPLSG 117 (138)
T ss_dssp SEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECSS-CCC--CCCEEEEEECTT
T ss_pred ceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCCC-CCC--cEEEEEEEehhH
Confidence 46888898999999999999995 998888888999998875422 223 689999999865
No 17
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=86.06 E-value=92 Score=40.31 Aligned_cols=318 Identities=13% Similarity=0.046 Sum_probs=152.9
Q ss_pred HHHHHHHHHHHHHHHHhccccchhHHHHHHHHhhHHHHHhhhhHHHHHHHHHHHHhhcccCCCcchhHHHHHHHHHHHhc
Q psy8415 504 FQRDLFAVFNALNSMLSVSYDIILDTQVTFKSGWVTLNRDYQLILEVAKFASDMLECLGKREAQPLLTKAKLECIKNLVS 583 (1561)
Q Consensus 504 F~~~l~~lf~si~~lm~~~~~~li~~Qt~al~~~a~~l~dL~~v~ev~~li~~fi~s~~~~~~~~~L~~~KL~~i~~iv~ 583 (1561)
+...+..++..+..++..+.+.+..+=..++..++.++..-..-..+..++..++..+... .......=...+..++.
T Consensus 394 ~~~~l~~~l~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~~ll~~L~~~L~d~--~~~vr~~a~~aL~~l~~ 471 (852)
T 4fdd_A 394 MIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDS--NKRVQEAACSAFATLEE 471 (852)
T ss_dssp HGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTHHHHHHSCTTTTHHHHHHHHHHHHTCS--SHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHH
Confidence 3344566777777777555443222222245555555543211111223333333333211 22333333344444443
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHHhcc--hhhHHHHHHHHHHHHHhhhhcccccccCCcccccchHHHHHHHHHHhHHHH
Q psy8415 584 GKLFSEDESRSYLLARICKHLRLHLAH--RDELKLCTEILSEILSFLYKKKRTCEVGGKVNNILHHDLELLCLSTLDMLI 661 (1561)
Q Consensus 584 ~~Lf~~~e~R~~Llp~~~~~l~~hl~~--~~~~~lc~~iL~~iL~~L~~~~~~~~~~~~~~~~~~~~v~~l~~~lL~~l~ 661 (1561)
.. .++... .++.++..|..-+.. .+....+.+.++.+.+....... ..+.+. .+++.++
T Consensus 472 ~~---~~~l~~-~l~~ll~~L~~~l~~~~~~~~~~~~~ai~~l~~~~~~~~~-----------~~~~~~----~l~p~l~ 532 (852)
T 4fdd_A 472 EA---CTELVP-YLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLN-----------KPEYIQ----MLMPPLI 532 (852)
T ss_dssp HH---GGGGGG-GHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHGGGGC-----------CHHHHH----HHHHHHH
T ss_pred Hh---hHhhHh-HHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhhhhhc-----------cHHHHH----HHHHHHH
Confidence 10 011111 233444444433322 23445566667776665543211 122333 3444444
Q ss_pred HHHHhhcCCCChhhhhHHHHHHHHHHhcCHHHHHHHHHHhCCcchHHHHHHHHHHHHHHhhc--------CCCCCC-Ccc
Q psy8415 662 QTVLIIIDRATPVLGSLVACLIGLLQLLDESHYKKLWEELGDKKPLKDFLLRAFLVLRDLVK--------QDVFPP-DWL 732 (1561)
Q Consensus 662 ~t~~~l~~~~~~~~~~l~acll~il~~m~~~~~~~~~~~~~~~~dl~~fL~~~~~~~~~ll~--------~~~fP~-~Wl 732 (1561)
+....+... ++.+..++-|+..|.+.+.. .+..|...+ +..++..++..+. ...+.. +-
T Consensus 533 ~~~~~l~d~-~~~~~~~~~~l~~i~~~~g~-~~~~~~~~i---------~~~~~~~l~~~l~~~~~~~~~~~~~~~~d~- 600 (852)
T 4fdd_A 533 QKWNMLKDE-DKDLFPLLECLSSVATALQS-GFLPYCEPV---------YQRCVNLVQKTLAQAMLNNAQPDQYEAPDK- 600 (852)
T ss_dssp HHHHHSCTT-CTTHHHHHHHHHHHHHHHGG-GGHHHHHHH---------HHHHHHHHHHHHHHHHHHHHCTTTSCCCCT-
T ss_pred HHHHhcccc-cHHHHHHHHHHHHHHHHHhH-hHHHHHHHH---------HHHHHHHHHHHHHHHHHhhcCCcccCCCcc-
Confidence 433333322 45556677777777766554 333344332 1222223332211 112211 10
Q ss_pred hhhhhhhHHHHHHHHHhhHHHHhhcCCCCCchhHHHH--HHHHHHHHHHhCCCccccccCCHHHHHHHHHHHhhHHHHHH
Q psy8415 733 VMRMVTNQVILTALGHLAPPLIYWFLDSRGAFAYQVW--SNYFNLAVSFLTQPSLQLEKFSDVKREKIIEKYGDMRVQMG 810 (1561)
Q Consensus 733 ~m~~~~~~v~L~~L~~ls~~l~~~f~~~~~~Fd~~LW--~~~f~~ll~~l~q~~L~LE~~~~~kR~ai~~~~gD~R~~~a 810 (1561)
-.-..++.++..++..+-.. |. ..+ ..++.+++..+..+. .++|..+.
T Consensus 601 ----~~~~~~l~~l~~l~~~l~~~-------~~-~~~~~~~~~~~l~~~l~~~~------------------~~vr~~a~ 650 (852)
T 4fdd_A 601 ----DFMIVALDLLSGLAEGLGGN-------IE-QLVARSNILTLMYQCMQDKM------------------PEVRQSSF 650 (852)
T ss_dssp ----HHHHHHHHHHHHHHHHHGGG-------GH-HHHHTCCHHHHHHHHTTCSS------------------HHHHHHHH
T ss_pred ----hHHHHHHHHHHHHHHHHhHh-------HH-HHhcCCcHHHHHHHHhCCCC------------------hhHHHHHH
Confidence 01123445555555544322 21 223 356777777775541 35666666
Q ss_pred HHHHHHHHhcccccccccccchHHHHHHcCCCchHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHhcCCC
Q psy8415 811 FQILKVWSSLGEHKINFIPSMVGPFLEVTLVPENELRKATLNIFFDMMECEQRVHGNFKQVESELIDKLDILISDNK 887 (1561)
Q Consensus 811 ~ll~~~W~~Lg~~q~~fip~Lv~~iLe~cls~~~~lR~~a~~il~~mm~~E~~~~~~f~~ve~eiI~~Ld~Lv~~g~ 887 (1561)
.++.++=..+|+.=..|++.++..+++.......++|+.|+..+-.+.+.- ..+|...-..++..|-.++++..
T Consensus 651 ~~l~~l~~~~~~~~~~~l~~~lp~l~~~l~~~~~~v~~~a~~alg~i~~~~---~~~~~p~~~~il~~L~~~l~~~~ 724 (852)
T 4fdd_A 651 ALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQM---GIEMQPYIPMVLHQLVEIINRPN 724 (852)
T ss_dssp HHHHHHHHHCGGGTGGGHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHH---GGGGGGGTHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHh---hHhHHHHHHHHHHHHHHHhCCCC
Confidence 666666666665545566777767777665667799999999988876542 23465555677777777776543
No 18
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=85.90 E-value=2.4 Score=43.45 Aligned_cols=59 Identities=12% Similarity=0.151 Sum_probs=46.5
Q ss_pred ceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 236 SEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 236 s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
..++|.|...+.+|.|+|++.+.++....... |.|+.++...-.+++ ..+|-+.+||-.
T Consensus 63 ~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~-L~i~V~d~d~~~~~d--~~lG~~~i~l~~ 121 (153)
T 3fbk_A 63 RHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKR-LLVTVWNRASQSRQS--GLIGCMSFGVKS 121 (153)
T ss_dssp TCEECCCCTTCSSCEEEEEEEEECCGGGTTSE-EEEEEEECCSSGGGC--EEEEEEEEEHHH
T ss_pred cEEeccccCCCCCCccccEEEEecccHHhCCE-EEEEEEeCCCCCCCC--cEEEEEEEEHHH
Confidence 45788888899999999999999987766655 999988765433223 678999999864
No 19
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=85.25 E-value=2.6 Score=42.35 Aligned_cols=60 Identities=15% Similarity=0.213 Sum_probs=47.9
Q ss_pred cceEEEEEEEecCCCccceeEEEe-eccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 235 SSEYHSMIIYHHNSPCWSEIIRLA-VPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 235 ~s~~~S~V~yHn~~P~w~EeIKi~-LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
...++|.|...+.+|.|+|++.+. +|.+......|.|+.++...-. ++ ..+|-+.+||-.
T Consensus 55 ~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d~~~-~~--~~lG~~~i~l~~ 115 (134)
T 2b3r_A 55 TSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAESLR-EN--FFLGGITLPLKD 115 (134)
T ss_dssp CCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECCSSS-CC--EEEEEEEEEGGG
T ss_pred CceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECCCCC-CC--cEEEEEEEEhhh
Confidence 345788898899999999999999 8887778889999988664221 22 678999999875
No 20
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=84.15 E-value=1.8 Score=44.97 Aligned_cols=59 Identities=10% Similarity=0.200 Sum_probs=47.8
Q ss_pred ceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 236 SEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 236 s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
..++|.|...+.+|.|+|++.+.+|.+......|.|+.++.... .++ ..+|-+.+||-.
T Consensus 81 ~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d~~-~~~--d~iG~~~i~l~~ 139 (155)
T 2z0u_A 81 CLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDRS-HLE--ECLGGAQISLAE 139 (155)
T ss_dssp HEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEECTT-SCE--EEEEEEEEECTT
T ss_pred cceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECCCC-CCC--cEEEEEEEEHHH
Confidence 35888899999999999999999998777788999998876432 222 678999999865
No 21
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=83.85 E-value=3.6 Score=41.78 Aligned_cols=59 Identities=15% Similarity=0.227 Sum_probs=45.3
Q ss_pred cceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 235 SSEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 235 ~s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
...++|.|..++.+|.|+|++.+.++.... ...|.|+.++..... ++ ..+|-+.+||-+
T Consensus 67 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~L~i~V~d~d~~~-~~--~~iG~~~i~l~~ 125 (149)
T 1a25_A 67 ESKQKTKTIKCSLNPEWNETFRFQLKESDK-DRRLSVEIWDWDLTS-RN--DFMGSLSFGISE 125 (149)
T ss_dssp SSCEECCCCSSCSSCEEEEEEEEECCSGGG-GCEEEEEEEECCSSS-CC--EEEEEEEEEHHH
T ss_pred cceEecceeCCCCCCcCCcEEEEEeccccC-CCEEEEEEEECCCCC-CC--CEEEEEEEEHHH
Confidence 456888899999999999999999986543 357999988764321 22 689999999864
No 22
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=82.63 E-value=4.8 Score=39.94 Aligned_cols=59 Identities=14% Similarity=0.200 Sum_probs=44.5
Q ss_pred cceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 235 SSEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 235 ~s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
...++|.|...+.+|.|+|++.+.++.... ...|.|+.++..... ++ ..+|-+.+||-+
T Consensus 52 ~~~~kT~~~~~t~nP~wne~f~f~~~~~~~-~~~l~i~v~d~d~~~-~~--~~iG~~~i~l~~ 110 (137)
T 3rdl_A 52 ESKQKTKTIRSTLNPQWNESFTFKLKPSDK-DRRLSVEIWDWDRTT-RN--DFMGSLSFGVSE 110 (137)
T ss_dssp CCCEECCCCCSCSSCEEEEEEEEECCGGGG-GCEEEEEEEECCSSS-CC--EEEEEEEEEHHH
T ss_pred CeeecCceEcCCCCCCcccEEEEEcCchhc-CCEEEEEEEECCCCC-CC--ceEEEEEEeHHH
Confidence 345788888999999999999999986543 347999988754322 22 678999999864
No 23
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=82.05 E-value=1.2 Score=45.51 Aligned_cols=60 Identities=13% Similarity=0.225 Sum_probs=48.3
Q ss_pred cceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 235 SSEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 235 ~s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
...++|.|...+.+|.|+|++.+.+|.+.....-|.|+.++...-. ++ ..+|-+.+||-.
T Consensus 60 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~~~-~~--~~iG~~~i~l~~ 119 (148)
T 3fdw_A 60 QGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGRFG-RN--TFLGEAEIQMDS 119 (148)
T ss_dssp GGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECGGG-CE--EEEEEEEEEHHH
T ss_pred cCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCCCc-CC--cEEEEEEEEccc
Confidence 4568888988899999999999999988887888999988754322 22 688999999864
No 24
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=81.72 E-value=0.92 Score=46.43 Aligned_cols=59 Identities=8% Similarity=0.160 Sum_probs=47.6
Q ss_pred ceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 236 SEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 236 s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
..++|.|...+.+|.|+|++.+.++.+......|.|+.++...- .++ ..+|-+-+||-.
T Consensus 67 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~~-~~~--~~lG~~~i~l~~ 125 (153)
T 1w15_A 67 SKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSERG-SRN--EVIGRLVLGATA 125 (153)
T ss_dssp EEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCTT-SCC--EEEEEEEESTTC
T ss_pred ceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCCC-CCC--cEEEEEEECCCC
Confidence 46788888889999999999999998888888999998875422 222 678999998854
No 25
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=80.58 E-value=5.2 Score=45.01 Aligned_cols=57 Identities=9% Similarity=0.187 Sum_probs=42.7
Q ss_pred eEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeecc
Q psy8415 237 EYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLM 296 (1561)
Q Consensus 237 ~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~ 296 (1561)
.++|-|...+.+|.|+|++.+.++.+......|.|+.++...-. ++ ..+|-+-+||-
T Consensus 55 ~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~~~-~~--~~lG~~~i~l~ 111 (284)
T 2r83_A 55 KFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFS-KH--DIIGEFKVPMN 111 (284)
T ss_dssp CEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCSSS-CC--CEEEEEEEEGG
T ss_pred eEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCCCC-CC--ceeEEEEEcch
Confidence 56788888888999999999999988778889999988764321 12 45565555543
No 26
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=79.22 E-value=1.4 Score=44.15 Aligned_cols=61 Identities=10% Similarity=0.220 Sum_probs=48.7
Q ss_pred cceEEEEEEEecCCCccceeEEEe-eccccccCcEEEEEEeecccccc-ccCCcceEEEEeeccC
Q psy8415 235 SSEYHSMIIYHHNSPCWSEIIRLA-VPIERYQSSHIRLEYRHCSTRDK-ADNKKLLGFSFARLME 297 (1561)
Q Consensus 235 ~s~~~S~V~yHn~~P~w~EeIKi~-LP~~~~~~~HLlFtFrH~S~~~k-~~~~~pfg~a~lPL~~ 297 (1561)
...++|.|...+.+|.|+|++.+. ++.+......|.|+.++.....+ ++ ..+|-+.+||-+
T Consensus 57 ~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~--~~lG~~~i~l~~ 119 (141)
T 1v27_A 57 KNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVREEES--EFLGEILIELET 119 (141)
T ss_dssp SSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCSSSSCCB--CCCEEEEEEGGG
T ss_pred CcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECCCCcCCCC--ceEEEEEEEccc
Confidence 456788888899999999999999 67777778899999887754332 23 789999999875
No 27
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=76.47 E-value=8.8 Score=38.72 Aligned_cols=57 Identities=18% Similarity=0.345 Sum_probs=44.3
Q ss_pred ceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeecccc----------ccccCCcceEEEEeeccC
Q psy8415 236 SEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTR----------DKADNKKLLGFSFARLME 297 (1561)
Q Consensus 236 s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~----------~k~~~~~pfg~a~lPL~~ 297 (1561)
..++|.|...+.+|.|+|++.+.++.. ...|.|+.++.... ..++ ..+|-+.+||-.
T Consensus 49 ~~~kT~~~~~t~nP~Wne~f~f~v~~~---~~~l~~~v~d~d~~~~~~~~~~~~~~~~--~~lG~~~i~l~~ 115 (148)
T 3kwu_A 49 TKKRTKTIYGNLNPVWEENFHFECHNS---SDRIKVRVLDEDDDIKSRVKQRFKRESD--DFLGQTIIEVRT 115 (148)
T ss_dssp EEEECCCCCSCSSCEEEEEEEEEECST---TCEEEEEEEECCCSHHHHHHTTTSSCSS--EEEEEEEEEGGG
T ss_pred EEEECCccCCCCCCCcccEEEEEecCC---CCEEEEEEEECCCCccccccccccCCCC--ccEEEEEEEHHH
Confidence 357888888889999999999988753 36899998876542 1233 789999999876
No 28
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=75.96 E-value=14 Score=35.86 Aligned_cols=86 Identities=10% Similarity=0.172 Sum_probs=64.8
Q ss_pred HHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHHHHHH
Q psy8415 971 YKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLCKELA 1050 (1561)
Q Consensus 971 ~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~keL~ 1050 (1561)
..|...+.+.|+|.||--++...-++ ++ .. -..|......+.+-+.|+.|+..|+..+
T Consensus 12 ~~lG~~~~~~~~~~~A~~~y~~Al~~---~p----------~~---------~~~~~nlg~~~~~~~~~~~A~~~~~~al 69 (127)
T 4gcn_A 12 KDLGNAAYKQKDFEKAHVHYDKAIEL---DP----------SN---------ITFYNNKAAVYFEEKKFAECVQFCEKAV 69 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH---CT----------TC---------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh---CC----------CC---------HHHHHhHHHHHHHhhhHHHHHHHHHHHH
Confidence 35777888999999998888654433 22 10 1244455556666678999999999999
Q ss_pred HHHHHhhhcHHHHHHHHHHHHHHHHHHh
Q psy8415 1051 DLYEKRLFDYKKLSNILQTQAQFCDNIL 1078 (1561)
Q Consensus 1051 ~~YE~~~~Dy~kLs~i~~~~a~lY~~I~ 1078 (1561)
........+|..++.+|..++.+|..+.
T Consensus 70 ~~~~~~~~~~~~~a~~~~~lg~~~~~~~ 97 (127)
T 4gcn_A 70 EVGRETRADYKLIAKAMSRAGNAFQKQN 97 (127)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HhCcccchhhHHHHHHHHHHHHHHHHcC
Confidence 9988877889999999999999887653
No 29
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=75.92 E-value=5 Score=39.27 Aligned_cols=56 Identities=14% Similarity=0.233 Sum_probs=44.2
Q ss_pred ceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 236 SEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 236 s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
..++|.|...+.+|.|+|++.+.++.. ....|.|+.++.... ++ ..+|.+.+||-.
T Consensus 41 ~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~~l~i~V~d~d~~--~~--~~iG~~~i~l~~ 96 (126)
T 1rlw_A 41 SRKRTRHFNNDINPVWNETFEFILDPN--QENVLEITLMDANYV--MD--ETLGTATFTVSS 96 (126)
T ss_dssp CCEECCCCTTCSSCEEEEEEEEEECTT--SCCEEEEEEEECCSS--CC--EEEEEEEEEGGG
T ss_pred ceEEccccCCCCCCcccceEEEEecCC--CCCEEEEEEEECCCC--CC--ceeEEEEEEHHH
Confidence 567888888889999999999998643 356899998876432 24 689999999864
No 30
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.88 E-value=1.3 Score=44.89 Aligned_cols=58 Identities=14% Similarity=0.151 Sum_probs=46.5
Q ss_pred eEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 237 EYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 237 ~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
.++|.|..++.+|.|+|++.+.++.+......|.|+.++...- .++ ..+|-+.+||-+
T Consensus 69 ~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~-~~~--~~iG~~~i~l~~ 126 (147)
T 2enp_A 69 SKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKF-SRH--CVIGKVSVPLCE 126 (147)
T ss_dssp CEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCSTT-CCS--CCCEEEEEETTT
T ss_pred ceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECCCC-cCC--cEEEEEEEechh
Confidence 5788888889999999999999987766777899998876422 223 689999999865
No 31
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=73.31 E-value=22 Score=39.96 Aligned_cols=127 Identities=9% Similarity=-0.018 Sum_probs=64.8
Q ss_pred HHHhHHHHHHhhcCChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCC--C--C-CCCCCchhhhH
Q psy8415 948 CTVNLLNFYKNEINRKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDP--M--C-QPNGAPEWYRK 1022 (1561)
Q Consensus 948 ~tl~Ll~fyk~~~~r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~--~--~-~~p~qt~~erK 1022 (1561)
+..++...|+ ..++.+-=+.++.+-..+..+.|++..+|.++.-.|..|.- . +.=.+.. . . -++........
T Consensus 78 ~~~~lg~~~~-~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g-~~~~A~~~~~~Al~~~~~~~~~~~~ 154 (307)
T 2ifu_A 78 AFEQAGMMLK-DLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-L-DLSKAVHLYQQAAAVFENEERLRQA 154 (307)
T ss_dssp HHHHHHHHHH-HTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-T-CHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHHHHhCCChhHH
Confidence 4445555555 56666666666666666666667776666666666666533 2 1000000 0 0 00000000011
Q ss_pred HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHh
Q psy8415 1023 EQLYYEIISYFDKGKCWEKGIPLCKELADLYEKRLFDYKKLSNILQTQAQFCDNIL 1078 (1561)
Q Consensus 1023 E~L~~~~i~~f~kg~~wE~ai~l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~I~ 1078 (1561)
...+..+...+.+-+.|+.|+..|+..+..+... -++...+..+..++.+|....
T Consensus 155 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~g~~~~~~g 209 (307)
T 2ifu_A 155 AELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM-ENYPTCYKKCIAQVLVQLHRA 209 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc-CChhHHHHHHHHHHHHHHHcC
Confidence 1244455555556666666666666666666654 555555555555555554443
No 32
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=72.72 E-value=8.5 Score=40.25 Aligned_cols=56 Identities=21% Similarity=0.219 Sum_probs=41.7
Q ss_pred ceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 236 SEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 236 s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
..++|.|..++.+|.|+|++.+.++.. ...|.|+.++...-. ++ ..+|-+.+||-.
T Consensus 46 ~~~kT~v~~~t~nP~Wne~f~f~v~~~---~~~L~~~V~d~d~~~-~d--~~lG~~~i~l~~ 101 (176)
T 3m7f_B 46 TSVQTKTIKKSLNPKWNEEILFRVLPQ---RHRILFEVFDENRLT-RD--DFLGQVDVPLYP 101 (176)
T ss_dssp EEEECCCCSSCSSCEEEEEEEEEECTT---TCEEEEEEEECC-----C--EEEEEEEEESCS
T ss_pred cceeCceECCCCCCcccceEEEEEcCC---CCEEEEEEEECCCCC-CC--cEEEEEEEEHHH
Confidence 457888888899999999999999843 468999988754322 22 678888888765
No 33
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=71.73 E-value=26 Score=32.34 Aligned_cols=87 Identities=9% Similarity=0.015 Sum_probs=62.4
Q ss_pred HHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHHHH
Q psy8415 969 YIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLCKE 1048 (1561)
Q Consensus 969 yv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~ke 1048 (1561)
-.+.++..+...|+|.+|.-++....+.. + . . ...+...+..+.+.+.|+.|+..|+.
T Consensus 6 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~---~-~---------~---------~~~~~~la~~~~~~~~~~~A~~~~~~ 63 (131)
T 1elr_A 6 KEKELGNDAYKKKDFDTALKHYDKAKELD---P-T---------N---------MTYITNQAAVYFEKGDYNKCRELCEK 63 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC---T-T---------C---------HHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcC---C-c---------c---------HHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 34678888999999999988887655442 1 0 0 13445566666677889999999999
Q ss_pred HHHHHHHhhhcHHHHHHHHHHHHHHHHHH
Q psy8415 1049 LADLYEKRLFDYKKLSNILQTQAQFCDNI 1077 (1561)
Q Consensus 1049 L~~~YE~~~~Dy~kLs~i~~~~a~lY~~I 1077 (1561)
.+........++..+..++..++.+|...
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 92 (131)
T 1elr_A 64 AIEVGRENREDYRQIAKAYARIGNSYFKE 92 (131)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHhhccccchhHHHHHHHHHHHHHHHHHh
Confidence 99988875566666677777777777553
No 34
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=70.76 E-value=69 Score=30.29 Aligned_cols=109 Identities=13% Similarity=-0.056 Sum_probs=74.1
Q ss_pred hHHHHHHhhcCChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHH
Q psy8415 951 NLLNFYKNEINRKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEII 1030 (1561)
Q Consensus 951 ~Ll~fyk~~~~r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i 1030 (1561)
+.++... ..+++.........|+..+...|+|.+|--.+....++..-.. + ....-..+....
T Consensus 34 ~al~~~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~-~---------------~~~~~~~~~~l~ 96 (164)
T 3ro3_A 34 QRLLIAK-EFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK-D---------------RAVEAQSCYSLG 96 (164)
T ss_dssp HHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-C---------------HHHHHHHHHHHH
T ss_pred HHHHHHH-HhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC-C---------------cHHHHHHHHHHH
Confidence 3334444 4566666677778899999999999999877765444332111 0 112224555666
Q ss_pred HHHHcccchhhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHH
Q psy8415 1031 SYFDKGKCWEKGIPLCKELADLYEKRLFDYKKLSNILQTQAQFCDNI 1077 (1561)
Q Consensus 1031 ~~f~kg~~wE~ai~l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~I 1077 (1561)
..+...+.|+.|+..++..+...+.. -+-...+.++..++.+|...
T Consensus 97 ~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~~~~~~~la~~~~~~ 142 (164)
T 3ro3_A 97 NTYTLLQDYEKAIDYHLKHLAIAQEL-KDRIGEGRACWSLGNAYTAL 142 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHc-cchHhHHHHHHHHHHHHHHc
Confidence 77777788999999999999888775 56666677777777777654
No 35
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.49 E-value=7.9 Score=38.62 Aligned_cols=58 Identities=19% Similarity=0.277 Sum_probs=44.7
Q ss_pred eEEEEEEEecCCCccceeEEEeecccc-ccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 237 EYHSMIIYHHNSPCWSEIIRLAVPIER-YQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 237 ~~~S~V~yHn~~P~w~EeIKi~LP~~~-~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
.++|.|...+.+|.|+|++.+.++... .....|.|+.++..... ++ ..+|.+-+||-.
T Consensus 39 ~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~-~~--~~lG~~~i~l~~ 97 (140)
T 2dmh_A 39 KKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIG-QN--KLIGTATVALKD 97 (140)
T ss_dssp EEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSS-SC--CCCEEEEEEGGG
T ss_pred eEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCC-CC--ceEEEEEEEHHH
Confidence 588888888889999999999997643 35688999988654321 22 678999999864
No 36
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=68.41 E-value=3.8 Score=40.79 Aligned_cols=55 Identities=15% Similarity=0.207 Sum_probs=42.8
Q ss_pred eEEEEEEE-ecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 237 EYHSMIIY-HHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 237 ~~~S~V~y-Hn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
.++|.|.. .+.+|.|+|++.+.++. ....|.|+.++...- .++ ..+|.+.+||-.
T Consensus 43 ~~kT~~~~~~~~nP~Wne~f~f~v~~---~~~~l~~~V~d~~~~-~~d--~~lG~~~i~l~~ 98 (136)
T 1wfj_A 43 DQKSNVAEGMGTTPEWNETFIFTVSE---GTTELKAKIFDKDVG-TED--DAVGEATIPLEP 98 (136)
T ss_dssp EEECCCCTTCCSSCEEEEEEEEEEES---SCCEEEEEECCSSSC-TTT--CCSEEEEEESHH
T ss_pred cceeEeccCCCCCCccCcEEEEEECC---CCCEEEEEEEECCCC-CCC--ceEEEEEEEHHH
Confidence 47888887 78999999999999885 567899998866422 123 789999999864
No 37
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=68.25 E-value=7.6 Score=44.22 Aligned_cols=56 Identities=11% Similarity=0.286 Sum_probs=43.7
Q ss_pred ceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEee
Q psy8415 236 SEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFAR 294 (1561)
Q Consensus 236 s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lP 294 (1561)
..++|-|...+.+|.|+|++.+.++.+......|.|+.++...-. ++ ..+|-+-++
T Consensus 55 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~-~~--~~iG~~~i~ 110 (296)
T 1dqv_A 55 KKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFS-RH--DLIGQVVLD 110 (296)
T ss_dssp SCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCSSS-CC--CEEEEEECC
T ss_pred eeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCCCC-CC--ceEEEEEec
Confidence 457888888899999999999999988777889999988764321 22 567777775
No 38
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=68.12 E-value=5.6 Score=52.69 Aligned_cols=69 Identities=9% Similarity=0.264 Sum_probs=52.8
Q ss_pred cCCCccceeEEEeecccccc-CcEEEEEEeecccc------cc---ccCCcceEEEEeeccCCCCceecCCceEEEEEee
Q psy8415 246 HNSPCWSEIIRLAVPIERYQ-SSHIRLEYRHCSTR------DK---ADNKKLLGFSFARLMEPSGATLQDCQHELFIYRC 315 (1561)
Q Consensus 246 n~~P~w~EeIKi~LP~~~~~-~~HLlFtFrH~S~~------~k---~~~~~pfg~a~lPL~~~~g~~l~DG~h~L~Vyk~ 315 (1561)
.+.|.|+|.|...|+....+ .+.|-|+.+-++.+ ++ ++...++|++=+||++.+|. ++.|.+.|.++..
T Consensus 262 ~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~-l~~G~~~l~lw~~ 340 (940)
T 2wxf_A 262 CSEPVWKQRLEFDISVCDLPRMARLCFALYAVVEKAKKARSTKKKSKKADCPIAWANLMLFDYKDQ-LKTGERCLYMWPS 340 (940)
T ss_dssp CSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEEC----------------CEEEEEEEEESBCTTSB-BCCEEEEEECEEC
T ss_pred CCCcccceEEEcccccccCCcccEEEEEEEEecCCccCccccccccccccceEEEEeeeEECCcCc-cccCCEEEEEeeC
Confidence 46799999999999866655 58999999877542 11 11036999999999998886 8899999999873
No 39
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=66.35 E-value=17 Score=48.80 Aligned_cols=68 Identities=16% Similarity=0.286 Sum_probs=52.2
Q ss_pred CCCccceeEEEeeccccccC-cEEEEEEeeccccccc-cCCcceEEEEeeccCCCCceecCCceEEEEEee
Q psy8415 247 NSPCWSEIIRLAVPIERYQS-SHIRLEYRHCSTRDKA-DNKKLLGFSFARLMEPSGATLQDCQHELFIYRC 315 (1561)
Q Consensus 247 ~~P~w~EeIKi~LP~~~~~~-~HLlFtFrH~S~~~k~-~~~~pfg~a~lPL~~~~g~~l~DG~h~L~Vyk~ 315 (1561)
++|.|+|.+...|+....+. +-|-||.+-++.+... +...|+|++=+||++.+|. ++.|.+.|.++..
T Consensus 402 ~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~~~~~~~~~~~~~lg~~n~~lfd~~~~-L~~G~~~L~lW~~ 471 (1091)
T 3hhm_A 402 SNPRWNEWLNYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLFDYTDT-LVSGKMALNLWPV 471 (1091)
T ss_dssp TSCEEEEEEEEEEEGGGCCTTCEEEEEECCCCCCC-------CCEEEEEESBCTTCB-BCCEEEEEECEEC
T ss_pred CCCCCCeeEEecCccccCChhcEEEEEEEEecCccCcccccceeEEeeeeeEccCCe-EEcCCeEEEeecC
Confidence 45679999999999766665 7999999977653221 1137999999999997775 8899999999974
No 40
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=65.74 E-value=4.3 Score=45.67 Aligned_cols=59 Identities=15% Similarity=0.247 Sum_probs=47.4
Q ss_pred ceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 236 SEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 236 s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
..++|.|...+.+|.|+|++.+.+|.+......|.|+.++...-. ++ ..+|-+-++|-.
T Consensus 187 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~-~~--~~iG~~~i~l~~ 245 (284)
T 2r83_A 187 KKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIG-KN--DAIGKVFVGYNS 245 (284)
T ss_dssp EEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSS-CC--CEEEEEEEETTC
T ss_pred eeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCC-CC--cEEEEEEECCCC
Confidence 457888888889999999999999988888889999988764322 22 678999888853
No 41
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=65.09 E-value=3.5 Score=43.19 Aligned_cols=56 Identities=9% Similarity=0.100 Sum_probs=43.1
Q ss_pred ceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEe-eccccccccCCcceEEEEeeccC
Q psy8415 236 SEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYR-HCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 236 s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFr-H~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
..++|.|..++.+|.|+|++.+.++.+ ...|.|+.+ +... -.++ ..+|-+-+||-.
T Consensus 68 ~~~kT~v~~~t~nP~wne~f~f~v~~~---~~~L~~~V~~d~d~-~~~d--~~iG~~~i~l~~ 124 (171)
T 2q3x_A 68 AKKKTRIARKTLDPLYQQSLVFDESPQ---GKVLQVIVWGDYGR-MDHK--CFMGVAQILLEE 124 (171)
T ss_dssp EEEECCCCCSCSSCEEEEEEECSSCCT---TEEEEEEEEEECST-TCSS--EEEEEEEECGGG
T ss_pred cceeCccCCCCCCCCCCcEEEEEecCC---CCEEEEEEEEcCCC-CCCC--CEEEEEEEEHHH
Confidence 467888989999999999999998753 578999988 3321 1222 689999999875
No 42
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=64.90 E-value=6.3 Score=40.03 Aligned_cols=57 Identities=21% Similarity=0.211 Sum_probs=44.2
Q ss_pred cceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 235 SSEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 235 ~s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
...++|.|...+.+|.|+|++.+.++. ....|.|+.++...-. ++ ..+|-+.+||-+
T Consensus 57 ~~~~kT~v~~~t~nP~wne~f~f~v~~---~~~~l~~~V~d~d~~~-~d--~~iG~~~i~l~~ 113 (153)
T 3b7y_A 57 LTSVQTKTIKKSLNPKWNEEILFRVHP---QQHRLLFEVFDENRLT-RD--DFLGQVDVPLYP 113 (153)
T ss_dssp EEEEECCCCSSCSSCCCCEEEEEEECT---TTCEEEEEEEECCSSS-CC--EEEEEEEEECCS
T ss_pred ceeeeCccccCCCCCCCCCEEEEEecC---CCCEEEEEEEECCCCc-CC--CeeEEEEEEHHH
Confidence 356788888889999999999999875 3578999988764321 23 789999999864
No 43
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=62.24 E-value=9.8 Score=38.14 Aligned_cols=53 Identities=15% Similarity=0.200 Sum_probs=39.5
Q ss_pred EEEEEE-EecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 238 YHSMII-YHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 238 ~~S~V~-yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
.+|.+. ..+.+|.|+|++.+.++. ....|.|+.++.. -.++ ..+|-+.+||-.
T Consensus 34 ~kt~~~~~~t~nP~WnE~f~f~v~~---~~~~L~~~V~D~d--~~~d--d~iG~~~i~l~~ 87 (131)
T 2cjt_A 34 VKSTTIAVRGSQPSWEQDFMFEINR---LDLGLTVEVWNKG--LIWD--TMVGTVWIPLRT 87 (131)
T ss_dssp EEEECCCEESSSCEEEEEEEEEECC---CSSEEEEEEEECC--SSCE--EEEEEEEEEGGG
T ss_pred EEEeEecCCCCCceECCEEEEEEeC---CCCeEEEEEEECC--CCCC--CeEEEEEEEHHH
Confidence 345444 468899999999999984 3457999988765 2234 789999999864
No 44
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=61.19 E-value=9.5 Score=40.10 Aligned_cols=53 Identities=15% Similarity=0.192 Sum_probs=40.0
Q ss_pred EEEEEEE-ecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 238 YHSMIIY-HHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 238 ~~S~V~y-Hn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
++|.+.. .+.+|.|+|++.+.++. ....|.|+.++.. -.++ ..+|-+.+||-.
T Consensus 43 ~kt~~~~~~t~nP~WnE~f~f~v~~---~~~~L~~~V~D~d--~~~d--d~iG~~~i~L~~ 96 (167)
T 2cjs_A 43 VESTTIAVRGSQPSWEQDFMFEINR---LDLGLTVEVWNKG--LIWD--TMVGTVWIPLRT 96 (167)
T ss_dssp EEEECCCEESSSCEEEEEEEEECCC---TTSEEEEEEEECC--SSCC--EEEEEEEEEGGG
T ss_pred eEEEEecCCCCCCCCCCEEEEEeeC---CCCEEEEEEEECC--CCCC--ceEEEEEEEHHH
Confidence 4555544 58899999999999984 3457999988764 2234 789999999875
No 45
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=61.17 E-value=3.8e+02 Score=34.97 Aligned_cols=53 Identities=13% Similarity=0.135 Sum_probs=35.2
Q ss_pred HHHHhhcCcchhhhhccHHHHHHHHHhhcccCCCcccchhhHHHHHHHHHHHhh
Q psy8415 393 ALNQALCLEGQELVKFLQDILDALFSMFSTEDGNSTMHSGLVFHVLTHIFSLLY 446 (1561)
Q Consensus 393 ~L~~l~~v~~~eiVKFL~~IlDaLF~IL~~~~~~s~~~~~lVF~aLV~Ii~lv~ 446 (1561)
+|..|..--...++.|++.|++.|+.++ ....-..+.-..+++|+..|+..+.
T Consensus 550 al~~l~~~~~~~l~p~~~~il~~l~~~l-~~~~~~~~~~~~~~eai~~i~~~~~ 602 (963)
T 2x19_B 550 TLKKICRECKYDLPPYAANIVAVSQDVL-MKQIHKTSQCMWLMQALGFLLSALQ 602 (963)
T ss_dssp HHHHHHHHTGGGCTTTHHHHHHHHHHHH-HTTCSCHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHh-ccCCCChHHHHHHHHHHHHHHhcCC
Confidence 3444443345678899999999999999 3211122345567889888887653
No 46
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=60.81 E-value=41 Score=37.68 Aligned_cols=50 Identities=8% Similarity=0.135 Sum_probs=24.0
Q ss_pred HHHHHHHHHHcccchhhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHH
Q psy8415 1025 LYYEIISYFDKGKCWEKGIPLCKELADLYEKRLFDYKKLSNILQTQAQFCDN 1076 (1561)
Q Consensus 1025 L~~~~i~~f~kg~~wE~ai~l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~ 1076 (1561)
.+..+...+.+ +.++.|+..|+..+..++.. -+....+.++..++.+|..
T Consensus 118 ~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~-~~~~~~~~~~~~lg~~~~~ 167 (307)
T 2ifu_A 118 ALDRAGKLMEP-LDLSKAVHLYQQAAAVFENE-ERLRQAAELIGKASRLLVR 167 (307)
T ss_dssp HHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhC-CChhHHHHHHHHHHHHHHH
Confidence 33444444444 44555555555555555443 3444444555555555443
No 47
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=60.26 E-value=67 Score=35.57 Aligned_cols=110 Identities=9% Similarity=0.085 Sum_probs=70.5
Q ss_pred HHHhHHHHHHhhcCChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHH
Q psy8415 948 CTVNLLNFYKNEINRKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYY 1027 (1561)
Q Consensus 948 ~tl~Ll~fyk~~~~r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~ 1027 (1561)
+..+.+..+. ..+++.-...-.+.|+..+.+.|+|.||--++..-.+++.=.. ....-...+.
T Consensus 59 ~~~~al~~~~-~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g----------------~~~~~a~~~~ 121 (292)
T 1qqe_A 59 SFLKAADYQK-KAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRG----------------QFRRGANFKF 121 (292)
T ss_dssp HHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT----------------CHHHHHHHHH
T ss_pred HHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcC----------------CHHHHHHHHH
Confidence 4444555544 5566666667778888899999999998888775555431111 0112223566
Q ss_pred HHHHHHHcc-cchhhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHH
Q psy8415 1028 EIISYFDKG-KCWEKGIPLCKELADLYEKRLFDYKKLSNILQTQAQFCD 1075 (1561)
Q Consensus 1028 ~~i~~f~kg-~~wE~ai~l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~ 1075 (1561)
.+...+.+- +.++.|+..|+.-+..+... -+-...+.++..++.+|.
T Consensus 122 ~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~-~~~~~~~~~~~~lg~~~~ 169 (292)
T 1qqe_A 122 ELGEILENDLHDYAKAIDCYELAGEWYAQD-QSVALSNKCFIKCADLKA 169 (292)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHhC-CChHHHHHHHHHHHHHHH
Confidence 677777775 88999999999999888764 343344455555555543
No 48
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=58.73 E-value=6 Score=41.33 Aligned_cols=53 Identities=17% Similarity=0.160 Sum_probs=38.8
Q ss_pred EEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 238 YHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 238 ~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
++|.|...+.+|.|+|++.+.++. ...|.|+.++...- .++ ..+|-+-+||-+
T Consensus 74 ~kT~v~~ktlnP~WNE~F~f~v~~----~~~L~~~V~D~d~~-~~d--d~iG~~~i~l~~ 126 (157)
T 2fk9_A 74 GQTSTKQKTNKPTYNEEFCANVTD----GGHLELAVFHETPL-GYD--HFVANCTLQFQE 126 (157)
T ss_dssp EECCCCSSCSSCEEEEEEEEEEEE----ECEEEEEEEECCSS-SSC--EEEEEEEEEHHH
T ss_pred EEeeecCCCCCCccCcEEEEEcCC----CCEEEEEEEECCCC-CCC--CEEEEEEEEHHH
Confidence 456677778899999999998863 46899998874321 122 678888888753
No 49
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=57.91 E-value=9.7 Score=50.57 Aligned_cols=70 Identities=11% Similarity=0.202 Sum_probs=52.6
Q ss_pred cCCCccceeEEEeecccccc-CcEEEEEEeeccccc-------------cccCCcceEEEEeeccCCCCceecCCceEEE
Q psy8415 246 HNSPCWSEIIRLAVPIERYQ-SSHIRLEYRHCSTRD-------------KADNKKLLGFSFARLMEPSGATLQDCQHELF 311 (1561)
Q Consensus 246 n~~P~w~EeIKi~LP~~~~~-~~HLlFtFrH~S~~~-------------k~~~~~pfg~a~lPL~~~~g~~l~DG~h~L~ 311 (1561)
...|.|+|.+...++....+ .+.|-||.+-++... ++....|+|++=+||++.+|. ++.|.|.|.
T Consensus 264 ~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~~-l~~G~~~L~ 342 (961)
T 1e7u_A 264 TEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRFL-LRHGEYVLH 342 (961)
T ss_dssp CSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEEC--------------------CEEEEEEEESBCTTSB-BCCEEEEEE
T ss_pred CCCcccceeEEeccccccCCcccEEEEEEEecccCccccccccccccccccccceeEEEEeeeeecCCCc-cccCCEEEE
Confidence 35789999999988866655 589999998654321 111036999999999998785 889999999
Q ss_pred EEeec
Q psy8415 312 IYRCE 316 (1561)
Q Consensus 312 Vyk~d 316 (1561)
++...
T Consensus 343 lw~~~ 347 (961)
T 1e7u_A 343 MWQLS 347 (961)
T ss_dssp CEECC
T ss_pred EeeCc
Confidence 99744
No 50
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=56.69 E-value=9 Score=37.90 Aligned_cols=57 Identities=14% Similarity=0.101 Sum_probs=41.7
Q ss_pred ceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeecc
Q psy8415 236 SEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLM 296 (1561)
Q Consensus 236 s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~ 296 (1561)
..++|.|...+.+|.|+|++.+.++.. ..|.|+.++.....+.+....+|-+.+||-
T Consensus 39 ~~~kT~v~~~t~nP~wne~f~f~v~~~----~~l~~~v~d~d~~~~~~~d~~lG~~~i~l~ 95 (132)
T 3pyc_A 39 QCHSTDTVKNTLDPKWNQHYDLYVGKT----DSITISVWNHKKIHKKQGAGFLGCVRLLSN 95 (132)
T ss_dssp CEEECCCCSSCSSCEEEEEEEEEEETT----CCEEEEEEEGGGTTSSTTTTEEEEEEECHH
T ss_pred ceEECCccCCCCCCCccCEEEEEeCCC----CEEEEEEEECCCCCCCCCCCceEEEEEeHH
Confidence 457888888899999999999988653 239999887754332110267999999854
No 51
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=55.97 E-value=32 Score=43.69 Aligned_cols=68 Identities=12% Similarity=0.257 Sum_probs=45.6
Q ss_pred ceEEEEEEEec-CCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccCCCCceecCCceEEEEE
Q psy8415 236 SEYHSMIIYHH-NSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLMEPSGATLQDCQHELFIY 313 (1561)
Q Consensus 236 s~~~S~V~yHn-~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~~~g~~l~DG~h~L~Vy 313 (1561)
..++|-|...+ .+|.|+|++.+.++... ...|+|+.++...-. ++ ..+|-+.+||-. |..|...++++
T Consensus 536 ~~~kTkvi~~ng~NP~WnE~f~F~v~~~e--l~~L~~~V~D~D~~~-~d--d~iG~~~ipl~~-----L~~G~r~v~L~ 604 (624)
T 1djx_A 536 GSRQTAVITNNGFNPRWDMEFEFEVTVPD--LALVRFMVEDYDSSS-KN--DFIGQSTIPWNS-----LKQGYRHVHLL 604 (624)
T ss_dssp EEEECCCCTTCSSSCEEEEEEEEEESCGG--GCEEEEEEEECCSSS-CC--EEEEEEEEEGGG-----BCCEEEEEEEE
T ss_pred ceeecccccCCCCCCccCceEEEEEecCC--CCEEEEEEEEcCCCC-CC--ceeEEEEEEHHH-----cCCCcEEEeCC
Confidence 45788888877 89999999998876432 368999988653211 22 567777777654 44455555554
No 52
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=54.29 E-value=96 Score=29.22 Aligned_cols=99 Identities=11% Similarity=-0.088 Sum_probs=64.7
Q ss_pred CChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchh
Q psy8415 961 NRKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWE 1040 (1561)
Q Consensus 961 ~r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE 1040 (1561)
+++.....-...|+..+...|+|.+|--++...-++..-.. + ....-..+..+...+...+.|+
T Consensus 3 ~d~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~-~---------------~~~~~~~~~~l~~~~~~~g~~~ 66 (164)
T 3ro3_A 3 GSRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG-D---------------KAAERIAYSNLGNAYIFLGEFE 66 (164)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT-C---------------HHHHHHHHHHHHHHHHHTTCHH
T ss_pred CcHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhC-C---------------chHHHHHHHHHHHHHHHcCCHH
Confidence 55666677778888899999999988877764443332111 0 0111234555666666677888
Q ss_pred hhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHH
Q psy8415 1041 KGIPLCKELADLYEKRLFDYKKLSNILQTQAQFCDN 1076 (1561)
Q Consensus 1041 ~ai~l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~ 1076 (1561)
.|+..++..+..++.. -|....+.++..++.+|..
T Consensus 67 ~A~~~~~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~ 101 (164)
T 3ro3_A 67 TASEYYKKTLLLARQL-KDRAVEAQSCYSLGNTYTL 101 (164)
T ss_dssp HHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHH
Confidence 8899888888888775 5656666666666666644
No 53
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=54.06 E-value=62 Score=35.86 Aligned_cols=97 Identities=13% Similarity=0.097 Sum_probs=71.4
Q ss_pred hhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhh
Q psy8415 963 KEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKG 1042 (1561)
Q Consensus 963 ~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~a 1042 (1561)
.+-=+.+..+.+..+...|+|.||.-++....++..-.. + ...-...|..+...+.+.+.|+.|
T Consensus 33 ~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~-~---------------~~~~a~~~~~lg~~~~~~g~~~~A 96 (292)
T 1qqe_A 33 FEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAG-N---------------EDEAGNTYVEAYKCFKSGGNSVNA 96 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTT-C---------------HHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC-C---------------HHHHHHHHHHHHHHHHHCCCHHHH
Confidence 444556667778888899999999999987666542111 0 011124567777888888899999
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHH
Q psy8415 1043 IPLCKELADLYEKRLFDYKKLSNILQTQAQFCDN 1076 (1561)
Q Consensus 1043 i~l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~ 1076 (1561)
+..|+..+..+... -|+...+.++..++.+|..
T Consensus 97 ~~~~~~Al~l~~~~-g~~~~~a~~~~~lg~~~~~ 129 (292)
T 1qqe_A 97 VDSLENAIQIFTHR-GQFRRGANFKFELGEILEN 129 (292)
T ss_dssp HHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHH
Confidence 99999999998875 7888788888888888865
No 54
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=53.20 E-value=9.1 Score=38.18 Aligned_cols=52 Identities=19% Similarity=0.204 Sum_probs=38.1
Q ss_pred EEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 239 HSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 239 ~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
+|.+...+.+|.|+|++.+.++.. ..|.|+.+|.... .++ ..+|-+-+||-+
T Consensus 53 ~T~~~~~t~nP~WnE~f~f~v~~~----~~L~~~V~d~d~~-~~d--d~iG~~~i~l~~ 104 (136)
T 1gmi_A 53 QTATKQKTNSPAWHDEFVTDVCNG----RKIELAVFHDAPI-GYD--DFVANCTIQFEE 104 (136)
T ss_dssp ECCCCSSCSSCEEEEEEEEEEEEE----CEEEEEEEECCSS-SSC--EEEEEEEEEHHH
T ss_pred eeeEECCCcCCccCCEEEEEecCC----CEEEEEEEeCCCC-CCC--CEEEEEEEEHHH
Confidence 444555677999999999998743 7899998875322 123 678999999853
No 55
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=53.10 E-value=1.1e+02 Score=34.87 Aligned_cols=116 Identities=13% Similarity=0.078 Sum_probs=80.5
Q ss_pred hcCChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCC-CC--CCCCCCCchhhhHHHHHHHHHHHHHc
Q psy8415 959 EINRKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLIN-DP--MCQPNGAPEWYRKEQLYYEIISYFDK 1035 (1561)
Q Consensus 959 ~~~r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~-~~--~~~~p~qt~~erKE~L~~~~i~~f~k 1035 (1561)
..+.|.. ..-+..|+..+.+.|++.+|--++...-++..-..+..... +. ..-+.... ....+.+++++|++
T Consensus 254 ~~~~~~~-~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~ly~~~~----~~~~~~~al~~~~~ 328 (378)
T 3q15_A 254 EKVPDLL-PKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETV----DERKIHDLLSYFEK 328 (378)
T ss_dssp HHCGGGH-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHHHHHHHHHHHSSSC----CHHHHHHHHHHHHH
T ss_pred hhCChhH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCC----cHHHHHHHHHHHHh
Confidence 4455665 67778888999999999888877766555543322100000 00 00000000 01568899999999
Q ss_pred ccchhhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHhhc
Q psy8415 1036 GKCWEKGIPLCKELADLYEKRLFDYKKLSNILQTQAQFCDNILNQ 1080 (1561)
Q Consensus 1036 g~~wE~ai~l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~I~~~ 1080 (1561)
.+.|.....++..|...|... -||.+=...+.+--++.++|.+.
T Consensus 329 ~~~~~~~~~~~~~la~~y~~~-g~~~~A~~~~~~al~~~~~~~~~ 372 (378)
T 3q15_A 329 KNLHAYIEACARSAAAVFESS-CHFEQAAAFYRKVLKAQEDILKG 372 (378)
T ss_dssp TTCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999997 99999888888888888888764
No 56
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=51.29 E-value=6.8 Score=38.86 Aligned_cols=55 Identities=11% Similarity=0.262 Sum_probs=41.5
Q ss_pred eEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 237 EYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 237 ~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
.++|.|...+.+|.|+|++.+.++. ....|.|+.++..... ++ ..+|.+.+||-.
T Consensus 46 ~~kT~~~~~t~nP~wne~f~f~~~~---~~~~l~i~V~d~d~~~-~~--~~lG~~~i~l~~ 100 (133)
T 2ep6_A 46 RLQTHTVYKNLNPEWNKVFTFPIKD---IHDVLEVTVFDEDGDK-PP--DFLGKVAIPLLS 100 (133)
T ss_dssp EEECCCCSSCSSCCCCEEEEEEESC---TTCEEEEEEEEEETTE-EE--EECCBCEEEGGG
T ss_pred EEEeeeecCCCCCccccEEEEEecC---CCCEEEEEEEECCCCC-CC--CeeEEEEEEHHH
Confidence 5688888889999999999999974 3467889877654321 22 678888888765
No 57
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=51.21 E-value=1.3e+02 Score=34.62 Aligned_cols=109 Identities=8% Similarity=-0.029 Sum_probs=70.9
Q ss_pred HHHhHHHHHHhhcCChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHH-HcCccCCCCCCCCCCCCCCCCchhhhHHHHH
Q psy8415 948 CTVNLLNFYKNEINRKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYAD-SLSWTSSAPLINDPMCQPNGAPEWYRKEQLY 1026 (1561)
Q Consensus 948 ~tl~Ll~fyk~~~~r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~-ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~ 1026 (1561)
..-+.+...+ ..++.....+-...|+.++.+.|+|.||.-.+.-.-. +..-++ . .-+...+
T Consensus 117 ~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~-~----------------~~~~~~~ 178 (434)
T 4b4t_Q 117 VCEKSIEFAK-REKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDD-K----------------PSLVDVH 178 (434)
T ss_dssp HHHHHHHHHH-HSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSC-S----------------THHHHHH
T ss_pred HHHHHHHHHH-HhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhccc-c----------------hhHHHHH
Confidence 3334455555 5667777888889999999999999999887764333 322222 1 1123456
Q ss_pred HHHHHHHHcccchhhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHH
Q psy8415 1027 YEIISYFDKGKCWEKGIPLCKELADLYEKRLFDYKKLSNILQTQAQFC 1074 (1561)
Q Consensus 1027 ~~~i~~f~kg~~wE~ai~l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY 1074 (1561)
...+..+..-+.|++|..+|+...........+....+.++..+..+|
T Consensus 179 ~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~ 226 (434)
T 4b4t_Q 179 LLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILH 226 (434)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHH
Confidence 666777777788999999999888877765333344455544444443
No 58
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=50.77 E-value=68 Score=28.81 Aligned_cols=88 Identities=8% Similarity=-0.071 Sum_probs=62.4
Q ss_pred HHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHHHH
Q psy8415 969 YIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLCKE 1048 (1561)
Q Consensus 969 yv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~ke 1048 (1561)
-.+.++..+...|+|.+|.-++....++ ++++ ...+......+.+-+.|+.|+..|+.
T Consensus 6 ~~~~~g~~~~~~~~~~~A~~~~~~al~~---~p~~-------------------~~~~~~lg~~~~~~g~~~~A~~~~~~ 63 (111)
T 2l6j_A 6 KQKEQGNSLFKQGLYREAVHCYDQLITA---QPQN-------------------PVGYSNKAMALIKLGEYTQAIQMCQQ 63 (111)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHH---CTTC-------------------HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhc---CCCC-------------------HHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 3567889999999999998887655443 2200 12345555666677789999999999
Q ss_pred HHHHHHHhhhcHHHHHHHHHHHHHHHHHHhh
Q psy8415 1049 LADLYEKRLFDYKKLSNILQTQAQFCDNILN 1079 (1561)
Q Consensus 1049 L~~~YE~~~~Dy~kLs~i~~~~a~lY~~I~~ 1079 (1561)
.+...... -+...+..++..++.+|..+..
T Consensus 64 al~~~p~~-~~~~~~~~~~~~~~~~~~~~~~ 93 (111)
T 2l6j_A 64 GLRYTSTA-EHVAIRSKLQYRLELAQGAVGS 93 (111)
T ss_dssp HHTSCSST-TSHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhCCCc-cHHHHHHHHHHHHHHHHHHHHh
Confidence 98765543 3555567788888888887764
No 59
>1ash_A Hemoglobin (OXY); oxygen storage; HET: HEM; 2.15A {Ascaris suum} SCOP: a.1.1.2
Probab=49.83 E-value=46 Score=34.54 Aligned_cols=43 Identities=14% Similarity=0.186 Sum_probs=36.0
Q ss_pred hcCChhHHHHHHHHHHHHHccCC------ChHHHHHHHH-HHHHHcCccC
Q psy8415 959 EINRKEMYLRYIYKLHDLHRPAD------NFTEAGFTLK-LYADSLSWTS 1001 (1561)
Q Consensus 959 ~~~r~emyiryv~~La~lH~~~~------Ny~EAAl~L~-lhA~ll~W~~ 1001 (1561)
..++++.+.-++.+|+..|...| .|...+-+|+ ..++.+.|++
T Consensus 79 ~lDd~~~L~~~l~~L~~~H~~~g~gV~~e~f~~v~~~Ll~~L~~~l~~t~ 128 (150)
T 1ash_A 79 TYDDRETFNAYTRELLDRHARDHVHMPPEVWTDFWKLFEEYLGKKTTLDE 128 (150)
T ss_dssp TTTSHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HCCCHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHcCCCH
Confidence 77999999999999999999998 7888888887 3466667765
No 60
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=49.72 E-value=61 Score=28.04 Aligned_cols=67 Identities=12% Similarity=0.133 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHH
Q psy8415 966 YLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPL 1045 (1561)
Q Consensus 966 yiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l 1045 (1561)
.....+.++..+...|+|.+|--++....++ ++ .. ...+......+.+.+.++.|+..
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~---~~----------~~---------~~~~~~l~~~~~~~~~~~~A~~~ 65 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL---DP----------NN---------AEAWYNLGNAYYKQGDYDEAIEY 65 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CT----------TC---------HHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhc---CC----------CC---------HHHHHHHHHHHHHHhhHHHHHHH
Confidence 4456678899999999999998777654443 11 00 12344556666677889999999
Q ss_pred HHHHHHHHH
Q psy8415 1046 CKELADLYE 1054 (1561)
Q Consensus 1046 ~keL~~~YE 1054 (1561)
++..+...-
T Consensus 66 ~~~a~~~~p 74 (91)
T 1na3_A 66 YQKALELDP 74 (91)
T ss_dssp HHHHHHHCT
T ss_pred HHHHHhcCC
Confidence 999887543
No 61
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=49.40 E-value=1.4e+02 Score=27.15 Aligned_cols=77 Identities=16% Similarity=0.134 Sum_probs=53.8
Q ss_pred HHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHHH
Q psy8415 968 RYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLCK 1047 (1561)
Q Consensus 968 ryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~k 1047 (1561)
...+.|+..+.+.|+|.+|--++....++ ++ ..+ ..+......+.+-+.|+.|+..|+
T Consensus 8 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~---~p----------~~~---------~a~~~lg~~~~~~g~~~~A~~~~~ 65 (100)
T 3ma5_A 8 FTRYALAQEHLKHDNASRALALFEELVET---DP----------DYV---------GTYYHLGKLYERLDRTDDAIDTYA 65 (100)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---ST----------TCT---------HHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CC----------CcH---------HHHHHHHHHHHHcCCHHHHHHHHH
Confidence 34567888999999999998877655443 22 111 244556667777788999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHH
Q psy8415 1048 ELADLYEKRLFDYKKLSNIL 1067 (1561)
Q Consensus 1048 eL~~~YE~~~~Dy~kLs~i~ 1067 (1561)
..+...... -|.....++.
T Consensus 66 ~al~l~~~~-~~~~~~~~l~ 84 (100)
T 3ma5_A 66 QGIEVAREE-GTQKDLSELQ 84 (100)
T ss_dssp HHHHHHHHH-SCHHHHHHHH
T ss_pred HHHhhhhcC-CchhHHHHHH
Confidence 999887765 6665555443
No 62
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=48.90 E-value=1.5e+02 Score=33.20 Aligned_cols=106 Identities=4% Similarity=-0.078 Sum_probs=77.2
Q ss_pred hcCChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccc
Q psy8415 959 EINRKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKC 1038 (1561)
Q Consensus 959 ~~~r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~ 1038 (1561)
..+.+.........|+..+...|+|.+|--.+....++..-.. .... ....+...+..+.+.+.
T Consensus 259 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~---------------~~~~-~~~~~~~la~~~~~~g~ 322 (406)
T 3sf4_A 259 QLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELN---------------DRIG-EGRACWSLGNAYTALGN 322 (406)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT---------------CHHH-HHHHHHHHHHHHHHHTC
T ss_pred hCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcC---------------CcHH-HHHHHHHHHHHHHHcCC
Confidence 4556666777888999999999999999877764433321111 0111 12355666777777789
Q ss_pred hhhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHhhcc
Q psy8415 1039 WEKGIPLCKELADLYEKRLFDYKKLSNILQTQAQFCDNILNQL 1081 (1561)
Q Consensus 1039 wE~ai~l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~I~~~~ 1081 (1561)
++.|+..++..+...+.. -+-...+.++..++.+|..+....
T Consensus 323 ~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~ 364 (406)
T 3sf4_A 323 HDQAMHFAEKHLEISREV-GDKSGELTARLNLSDLQMVLGLSY 364 (406)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHh-cCCcchhHHHHHHHHHHHHhhHhH
Confidence 999999999999999886 677778889999999998876543
No 63
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=48.17 E-value=4.7 Score=45.97 Aligned_cols=60 Identities=10% Similarity=0.131 Sum_probs=48.2
Q ss_pred cceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 235 SSEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 235 ~s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
...++|.|...+.+|.|+|++.+.+|.+......|.|+.++...-. ++ ..+|.+-++|-.
T Consensus 188 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~-~~--~~iG~~~i~l~~ 247 (296)
T 1dqv_A 188 LKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIG-HN--EVIGVCRVGPEA 247 (296)
T ss_dssp TSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCSSS-CC--EEEEECCCSSCT
T ss_pred ccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCCCC-CC--ceEEEEEECCcc
Confidence 4678899999999999999999999988777788999988764321 22 678888888765
No 64
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=47.89 E-value=83 Score=28.95 Aligned_cols=79 Identities=9% Similarity=-0.060 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHH
Q psy8415 967 LRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLC 1046 (1561)
Q Consensus 967 iryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~ 1046 (1561)
....+.++..+...|+|.+|--++....++ ++ + . ...+...+..+.+.+.|+.|+..+
T Consensus 50 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~---~~-~------------~------~~~~~~la~~~~~~~~~~~A~~~~ 107 (133)
T 2lni_A 50 AKLYSNRAACYTKLLEFQLALKDCEECIQL---EP-T------------F------IKGYTRKAAALEAMKDYTKAMDVY 107 (133)
T ss_dssp HHHHHHHHHHHTTTTCHHHHHHHHHHHHHH---CT-T------------C------HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHh---CC-C------------c------hHHHHHHHHHHHHHhhHHHHHHHH
Confidence 345677889999999999998877654443 22 0 0 124445556666777899999999
Q ss_pred HHHHHHHHHhhhcHHHHHHHH
Q psy8415 1047 KELADLYEKRLFDYKKLSNIL 1067 (1561)
Q Consensus 1047 keL~~~YE~~~~Dy~kLs~i~ 1067 (1561)
+..+........-+..|+.++
T Consensus 108 ~~~~~~~p~~~~~~~~l~~~~ 128 (133)
T 2lni_A 108 QKALDLDSSCKEAADGYQRCM 128 (133)
T ss_dssp HHHHHHCGGGTHHHHHHHHHH
T ss_pred HHHHHhCCCchHHHHHHHHHH
Confidence 998876544322233344433
No 65
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=46.21 E-value=1.4e+02 Score=32.80 Aligned_cols=97 Identities=13% Similarity=0.094 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHH
Q psy8415 965 MYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIP 1044 (1561)
Q Consensus 965 myiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~ 1044 (1561)
.+..|.+.|+..+...++|.+|--.+...-++. ....+ +...-..+..+...+..-+.|+.|+.
T Consensus 113 ~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~-~~~~~---------------~~~~~~~~~~lg~~y~~~g~~~~A~~ 176 (293)
T 3u3w_A 113 QFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQ-LTGID---------------VYQNLYIENAIANIYAENGYLKKGID 176 (293)
T ss_dssp HHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTC-CCCSC---------------TTHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHh-ccccc---------------HHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 357788889999999999999977665443321 11100 01223456777777777778999999
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHH
Q psy8415 1045 LCKELADLYEKRLFDYKKLSNILQTQAQFCDNI 1077 (1561)
Q Consensus 1045 l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~I 1077 (1561)
.|+..+..++....+-...+.++..++.+|.+.
T Consensus 177 ~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~ 209 (293)
T 3u3w_A 177 LFEQILKQLEALHDNEEFDVKVRYNHAKALYLD 209 (293)
T ss_dssp HHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcccchhHHHHHHHHHHHHHHHH
Confidence 999999888875346666667777777776553
No 66
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=45.32 E-value=17 Score=38.35 Aligned_cols=55 Identities=22% Similarity=0.306 Sum_probs=42.1
Q ss_pred ceEEEEEEEecCCCccceeEEEeeccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 236 SEYHSMIIYHHNSPCWSEIIRLAVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 236 s~~~S~V~yHn~~P~w~EeIKi~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
..++|.|...+.+|.|+|++.+.++ +...|.|+.++...-. ++ ..+|.+.+||-+
T Consensus 68 ~~~kT~v~~~tlnP~Wne~f~f~v~----~~~~L~~~V~D~d~~~-~d--d~lG~~~i~l~~ 122 (173)
T 2nq3_A 68 QSKKTEKCNNTNSPKWKQPLTVIVT----PVSKLHFRVWSHQTLK-SD--VLLGTAALDIYE 122 (173)
T ss_dssp EEEECCCCSSCSSCEEEEEEEEEEC----TTCEEEEEEEECCSSS-CC--EEEEEEEEEHHH
T ss_pred EEeEccccCCCCCCeECCEEEEEeC----CCCEEEEEEEECCCCC-CC--ceEEEEEEEHHH
Confidence 4678888888899999999999874 3778999987653221 22 688999999864
No 67
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=45.28 E-value=1.2e+02 Score=31.58 Aligned_cols=87 Identities=11% Similarity=-0.029 Sum_probs=63.7
Q ss_pred HHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHHH
Q psy8415 968 RYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLCK 1047 (1561)
Q Consensus 968 ryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~k 1047 (1561)
.-...++..+...|+|.+|.-++....+.. +. ...+...+..+..-+.|+.|+..++
T Consensus 6 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~--~~---------------------~~~~~~~~~~~~~~~~~~~A~~~~~ 62 (258)
T 3uq3_A 6 DKEKAEGNKFYKARQFDEAIEHYNKAWELH--KD---------------------ITYLNNRAAAEYEKGEYETAISTLN 62 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--CC---------------------THHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhh--cc---------------------HHHHHHHHHHHHHcccHHHHHHHHH
Confidence 345678899999999999998887655543 11 0244555666667778999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHHHHHHHH
Q psy8415 1048 ELADLYEKRLFDYKKLSNILQTQAQFCDNI 1077 (1561)
Q Consensus 1048 eL~~~YE~~~~Dy~kLs~i~~~~a~lY~~I 1077 (1561)
..+.......-++...+.++..++.+|...
T Consensus 63 ~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 92 (258)
T 3uq3_A 63 DAVEQGREMRADYKVISKSFARIGNAYHKL 92 (258)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhCcccccchHHHHHHHHHHHHHHHHc
Confidence 999988775447777777777777777543
No 68
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=43.91 E-value=1.8e+02 Score=31.20 Aligned_cols=103 Identities=13% Similarity=-0.056 Sum_probs=71.0
Q ss_pred hcCChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccc
Q psy8415 959 EINRKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKC 1038 (1561)
Q Consensus 959 ~~~r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~ 1038 (1561)
..+.+.........++..+...|++.+|--.+...-++..-.. + .......+...+..+.+-+.
T Consensus 215 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~-~---------------~~~~~~~~~~la~~~~~~g~ 278 (338)
T 3ro2_A 215 EFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK-D---------------RAVEAQSCYSLGNTYTLLQD 278 (338)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT-C---------------HHHHHHHHHHHHHHHHHTTC
T ss_pred hcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhc-c---------------hhHHHHHHHHHHHHHHHhcC
Confidence 4456666667778888889999999998877764433322111 0 11222455666777777788
Q ss_pred hhhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHh
Q psy8415 1039 WEKGIPLCKELADLYEKRLFDYKKLSNILQTQAQFCDNIL 1078 (1561)
Q Consensus 1039 wE~ai~l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~I~ 1078 (1561)
|+.|+..++..+...... .+....+.++..++.+|....
T Consensus 279 ~~~A~~~~~~a~~~~~~~-~~~~~~~~~~~~la~~~~~~g 317 (338)
T 3ro2_A 279 YEKAIDYHLKHLAIAQEL-KDRIGEGRACWSLGNAYTALG 317 (338)
T ss_dssp HHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHcC
Confidence 999999999999888875 666667777777888776643
No 69
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=43.34 E-value=16 Score=36.42 Aligned_cols=58 Identities=10% Similarity=0.261 Sum_probs=44.5
Q ss_pred eEEEEEEEecCCCccceeEEEe-eccccccCcEEEEEEeeccccccccCCcceEEEEeeccC
Q psy8415 237 EYHSMIIYHHNSPCWSEIIRLA-VPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLME 297 (1561)
Q Consensus 237 ~~~S~V~yHn~~P~w~EeIKi~-LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~ 297 (1561)
.++|.|..++.+|.|+|++.+. +|.+......|.|+.++...-. ++ ..+|-+.+||-.
T Consensus 65 ~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~~~-~~--~~lG~~~i~l~~ 123 (142)
T 1rh8_A 65 KRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFS-SN--DFLGEVLIDLSS 123 (142)
T ss_dssp HTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEECSSS-CE--EEEEEEEEETTS
T ss_pred eeeccccCCCCCCCCCCEEEECCcCHHHccCCEEEEEEEECCCCC-CC--ceEEEEEEeccc
Confidence 4566677778899999999997 8887777889999988764321 22 678999999864
No 70
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=42.18 E-value=2.7e+02 Score=27.67 Aligned_cols=38 Identities=13% Similarity=0.031 Sum_probs=23.1
Q ss_pred hcCChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHH
Q psy8415 959 EINRKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADS 996 (1561)
Q Consensus 959 ~~~r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~l 996 (1561)
..+.+.....-...|+..+...|+|.+|--.+..-.++
T Consensus 58 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 58 KSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEEREL 95 (203)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 44455555556666777777777777776655543333
No 71
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=41.56 E-value=1.6e+02 Score=33.37 Aligned_cols=102 Identities=10% Similarity=-0.058 Sum_probs=63.7
Q ss_pred hcCChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccc
Q psy8415 959 EINRKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKC 1038 (1561)
Q Consensus 959 ~~~r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~ 1038 (1561)
..+++.......+.|+..+...|++.+|--++..-.+++.-.+ + ...+....+..+...+..-+.
T Consensus 135 ~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~-~--------------~~~~~~~~~~~lg~~~~~~g~ 199 (383)
T 3ulq_A 135 FVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHE-A--------------YNIRLLQCHSLFATNFLDLKQ 199 (383)
T ss_dssp GCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCS-T--------------THHHHHHHHHHHHHHHHHTTC
T ss_pred hCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCc-c--------------chHHHHHHHHHHHHHHHHhcC
Confidence 3455556667778888888888888888777665544442221 0 011222345555566666667
Q ss_pred hhhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHH
Q psy8415 1039 WEKGIPLCKELADLYEKRLFDYKKLSNILQTQAQFCDN 1076 (1561)
Q Consensus 1039 wE~ai~l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~ 1076 (1561)
|+.|+..++..+..++.. -|-..++.++..++.+|..
T Consensus 200 ~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~lg~~y~~ 236 (383)
T 3ulq_A 200 YEDAISHFQKAYSMAEAE-KQPQLMGRTLYNIGLCKNS 236 (383)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHH
Confidence 777777777777777765 5666666666666666644
No 72
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=40.10 E-value=2.5e+02 Score=31.33 Aligned_cols=102 Identities=13% Similarity=-0.043 Sum_probs=68.7
Q ss_pred hcCChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccc
Q psy8415 959 EINRKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKC 1038 (1561)
Q Consensus 959 ~~~r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~ 1038 (1561)
..+.+.........|+..+...|++.+|--++....++..-.. . .......+...+..+.+-+.
T Consensus 219 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~---------------~-~~~~~~~~~~la~~~~~~g~ 282 (406)
T 3sf4_A 219 EFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK---------------D-RAVEAQSCYSLGNTYTLLQD 282 (406)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT---------------C-HHHHHHHHHHHHHHHHHTTC
T ss_pred hcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCc---------------C-chHHHHHHHHHHHHHHHhCc
Confidence 4455556666778889999999999998777754433321111 0 11223455666777777788
Q ss_pred hhhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHH
Q psy8415 1039 WEKGIPLCKELADLYEKRLFDYKKLSNILQTQAQFCDNI 1077 (1561)
Q Consensus 1039 wE~ai~l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~I 1077 (1561)
|+.|+..++..+...+.. .|....+.++..++.+|...
T Consensus 283 ~~~A~~~~~~a~~~~~~~-~~~~~~~~~~~~la~~~~~~ 320 (406)
T 3sf4_A 283 YEKAIDYHLKHLAIAQEL-NDRIGEGRACWSLGNAYTAL 320 (406)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHc
Confidence 999999999998888775 56666667777777777654
No 73
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=39.90 E-value=84 Score=32.21 Aligned_cols=95 Identities=8% Similarity=-0.034 Sum_probs=58.8
Q ss_pred hhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhh
Q psy8415 963 KEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKG 1042 (1561)
Q Consensus 963 ~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~a 1042 (1561)
.++.....+.++..+...|+|.+|--++....++ ++ + . ...+......+..-+.|+.|
T Consensus 84 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~---~p-~---------~---------~~~~~~lg~~~~~~~~~~~A 141 (198)
T 2fbn_A 84 KNIEISCNLNLATCYNKNKDYPKAIDHASKVLKI---DK-N---------N---------VKALYKLGVANMYFGFLEEA 141 (198)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---ST-T---------C---------HHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh---Cc-c---------c---------HHHHHHHHHHHHHcccHHHH
Confidence 4455677788999999999999998777654443 22 0 0 12334444555566779999
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHhhccCCCCc
Q psy8415 1043 IPLCKELADLYEKRLFDYKKLSNILQTQAQFCDNILNQLRPEPE 1086 (1561)
Q Consensus 1043 i~l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~I~~~~R~~~~ 1086 (1561)
+..|+..+...-.. ..++..++.++..+.+..+....
T Consensus 142 ~~~~~~al~~~p~~-------~~~~~~l~~~~~~~~~~~~~~~~ 178 (198)
T 2fbn_A 142 KENLYKAASLNPNN-------LDIRNSYELCVNKLKEARKKDKL 178 (198)
T ss_dssp HHHHHHHHHHSTTC-------HHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHCCCc-------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888764332 34555556666665554444333
No 74
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=39.89 E-value=2.5e+02 Score=31.72 Aligned_cols=102 Identities=12% Similarity=-0.026 Sum_probs=70.8
Q ss_pred hcCChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccc
Q psy8415 959 EINRKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKC 1038 (1561)
Q Consensus 959 ~~~r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~ 1038 (1561)
..+.+.........|+..+...|+|.||--.+....++..-.. . .......+...+..+.+.+.
T Consensus 255 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~---------------~-~~~~~~~~~~la~~~~~~g~ 318 (411)
T 4a1s_A 255 EFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELG---------------E-REVEAQSCYSLGNTYTLLHE 318 (411)
T ss_dssp HHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTT---------------C-HHHHHHHHHHHHHHHHHTTC
T ss_pred hcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcC---------------C-HHHHHHHHHHHHHHHHHcCC
Confidence 4455566666778889999999999999877764433321111 0 11223456667777777888
Q ss_pred hhhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHH
Q psy8415 1039 WEKGIPLCKELADLYEKRLFDYKKLSNILQTQAQFCDNI 1077 (1561)
Q Consensus 1039 wE~ai~l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~I 1077 (1561)
|+.|+..++..+...+.. .+....+.++..++.+|...
T Consensus 319 ~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~la~~~~~~ 356 (411)
T 4a1s_A 319 FNTAIEYHNRHLAIAQEL-GDRIGEARACWSLGNAHSAI 356 (411)
T ss_dssp HHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHC-CChHHHHHHHHHHHHHHHHh
Confidence 999999999999988875 66666777787888887653
No 75
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=39.85 E-value=2e+02 Score=26.29 Aligned_cols=83 Identities=8% Similarity=-0.066 Sum_probs=54.8
Q ss_pred HHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHHH
Q psy8415 968 RYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLCK 1047 (1561)
Q Consensus 968 ryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~k 1047 (1561)
...+.|+..+...|+|.+|--++....++ ++ .. ...+......+.+.+.|+.|+..|+
T Consensus 20 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~---~p----------~~---------~~~~~~la~~~~~~g~~~~A~~~~~ 77 (115)
T 2kat_A 20 LLRFTLGKTYAEHEQFDAALPHLRAALDF---DP----------TY---------SVAWKWLGKTLQGQGDRAGARQAWE 77 (115)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CT----------TC---------HHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHH---CC----------Cc---------HHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 45567889999999999998877654443 11 00 1233455666667788999999999
Q ss_pred HHHHHHHHhhhcHHHHHHHHHHHHHH
Q psy8415 1048 ELADLYEKRLFDYKKLSNILQTQAQF 1073 (1561)
Q Consensus 1048 eL~~~YE~~~~Dy~kLs~i~~~~a~l 1073 (1561)
..+...... -+-..+.++...+..+
T Consensus 78 ~al~~~~~~-~~~~~~~~l~~~l~~l 102 (115)
T 2kat_A 78 SGLAAAQSR-GDQQVVKELQVFLRRL 102 (115)
T ss_dssp HHHHHHHHH-TCHHHHHHHHHHHHHH
T ss_pred HHHHhcccc-ccHHHHHHHHHHHHHh
Confidence 998877764 4544444444444433
No 76
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=39.20 E-value=1.8e+02 Score=31.20 Aligned_cols=103 Identities=7% Similarity=-0.083 Sum_probs=75.0
Q ss_pred cCChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccch
Q psy8415 960 INRKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCW 1039 (1561)
Q Consensus 960 ~~r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~w 1039 (1561)
.++++........|+..+...|+|.+|--++...-++..=.. + ....-..+......+..-+.|
T Consensus 36 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~-~---------------~~~~~~~~~~l~~~~~~~g~~ 99 (338)
T 3ro2_A 36 TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIG-D---------------QLGEAKASGNLGNTLKVLGNF 99 (338)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT-C---------------HHHHHHHHHHHHHHHHHTTCH
T ss_pred cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccc-c---------------cHHHHHHHHHHHHHHHHccCH
Confidence 356666677788899999999999999887764433321111 0 011224556667777777899
Q ss_pred hhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHhh
Q psy8415 1040 EKGIPLCKELADLYEKRLFDYKKLSNILQTQAQFCDNILN 1079 (1561)
Q Consensus 1040 E~ai~l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~I~~ 1079 (1561)
+.|+..++..+...+.. -|-...+.++..++.+|.....
T Consensus 100 ~~A~~~~~~al~~~~~~-~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 100 DEAIVCCQRHLDISREL-NDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHcCc
Confidence 99999999999999886 7777788889999999887665
No 77
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=37.64 E-value=77 Score=31.38 Aligned_cols=23 Identities=4% Similarity=-0.083 Sum_probs=12.3
Q ss_pred HHHHHHHHHccCCChHHHHHHHH
Q psy8415 969 YIYKLHDLHRPADNFTEAGFTLK 991 (1561)
Q Consensus 969 yv~~La~lH~~~~Ny~EAAl~L~ 991 (1561)
.++.++..+...|+|.+|.-++.
T Consensus 13 ~~~~~g~~~~~~g~~~~A~~~~~ 35 (164)
T 3sz7_A 13 KLKSEGNAAMARKEYSKAIDLYT 35 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHH
Confidence 34445555555566555555444
No 78
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=37.44 E-value=83 Score=28.07 Aligned_cols=64 Identities=13% Similarity=-0.019 Sum_probs=37.4
Q ss_pred HHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHHHH
Q psy8415 969 YIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLCKE 1048 (1561)
Q Consensus 969 yv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~ke 1048 (1561)
..+.++..+...|+|.+|.-++....+.. + . . ...+...+..+.+.+.|+.|+..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~---~-~---------~---------~~~~~~~a~~~~~~~~~~~A~~~~~~ 63 (118)
T 1elw_A 6 ELKEKGNKALSVGNIDDALQCYSEAIKLD---P-H---------N---------HVLYSNRSAAYAKKGDYQKAYEDGCK 63 (118)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC---T-T---------C---------HHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHC---C-C---------c---------HHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 44566777777888888877765443321 1 0 0 12333444445555667777777777
Q ss_pred HHHHHH
Q psy8415 1049 LADLYE 1054 (1561)
Q Consensus 1049 L~~~YE 1054 (1561)
.+....
T Consensus 64 ~~~~~~ 69 (118)
T 1elw_A 64 TVDLKP 69 (118)
T ss_dssp HHHHCT
T ss_pred HHHhCc
Confidence 766543
No 79
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=37.40 E-value=66 Score=29.04 Aligned_cols=20 Identities=20% Similarity=0.177 Sum_probs=9.4
Q ss_pred HHHHHHHccCCChHHHHHHH
Q psy8415 971 YKLHDLHRPADNFTEAGFTL 990 (1561)
Q Consensus 971 ~~La~lH~~~~Ny~EAAl~L 990 (1561)
+.++..+...|+|.+|.-.+
T Consensus 13 ~~~~~~~~~~~~~~~A~~~~ 32 (125)
T 1na0_A 13 YNLGNAYYKQGDYDEAIEYY 32 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHH
Confidence 34444444555555544333
No 80
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=35.93 E-value=23 Score=47.57 Aligned_cols=68 Identities=12% Similarity=0.204 Sum_probs=49.2
Q ss_pred cCCCccceeEEEeecccccc-CcEEEEEEeecccc---c---------------c-ccCCcceEEEEeeccCCCCceecC
Q psy8415 246 HNSPCWSEIIRLAVPIERYQ-SSHIRLEYRHCSTR---D---------------K-ADNKKLLGFSFARLMEPSGATLQD 305 (1561)
Q Consensus 246 n~~P~w~EeIKi~LP~~~~~-~~HLlFtFrH~S~~---~---------------k-~~~~~pfg~a~lPL~~~~g~~l~D 305 (1561)
...|.|+|.|...|+....+ .+.|-|+.+-++.. . + ++...|+|++=+||++.+|. ++.
T Consensus 398 ~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~-l~~ 476 (1092)
T 2y3a_A 398 KNDHIWNEQLEFDINICDLPRMARLCFAVYAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKGQ-LRS 476 (1092)
T ss_dssp SSCCCCCEEEEEEEESSSCCTTCEEEEECCCC------------------------------CCEEEEESBCTTCB-BCC
T ss_pred CCCCccceeEEeCCccccCChhcEEEEEEEEecCccccccccccccccccccccccccccceeEEEeeeeECCcCc-ccC
Confidence 46799999999999866655 57999998876411 0 0 11025999999999998886 889
Q ss_pred CceEEEEEe
Q psy8415 306 CQHELFIYR 314 (1561)
Q Consensus 306 G~h~L~Vyk 314 (1561)
|.+.|.++.
T Consensus 477 G~~~l~lw~ 485 (1092)
T 2y3a_A 477 GDVILHSWS 485 (1092)
T ss_dssp EEEECCCCT
T ss_pred CCeEEEEee
Confidence 999999986
No 81
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=35.75 E-value=2.4e+02 Score=31.93 Aligned_cols=101 Identities=7% Similarity=-0.169 Sum_probs=59.9
Q ss_pred hcCChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccc
Q psy8415 959 EINRKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKC 1038 (1561)
Q Consensus 959 ~~~r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~ 1038 (1561)
..+++.........|+..+...|+|.+|--++....++..-.. + ....-..+...+..+...+.
T Consensus 215 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~-~---------------~~~~~~~~~~la~~~~~~g~ 278 (411)
T 4a1s_A 215 DLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFG-D---------------RAAERRANSNLGNSHIFLGQ 278 (411)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT-C---------------HHHHHHHHHHHHHHHHTTTC
T ss_pred HcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcC-C---------------cHHHHHHHHHHHHHHHHCcC
Confidence 3455556666777888888889999888777654433321111 0 00111344555566666677
Q ss_pred hhhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHH
Q psy8415 1039 WEKGIPLCKELADLYEKRLFDYKKLSNILQTQAQFCDN 1076 (1561)
Q Consensus 1039 wE~ai~l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~ 1076 (1561)
|+.|+..++..+...... -+....+.++..++.+|..
T Consensus 279 ~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~la~~~~~ 315 (411)
T 4a1s_A 279 FEDAAEHYKRTLALAVEL-GEREVEAQSCYSLGNTYTL 315 (411)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHH
Confidence 778888877777777654 4444445555555555543
No 82
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=35.27 E-value=2.7e+02 Score=29.74 Aligned_cols=56 Identities=13% Similarity=0.063 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHhcccccccccccchHHHHHHcCCCchHHHHHHHHHHHHHHHH
Q psy8415 805 MRVQMGFQILKVWSSLGEHKINFIPSMVGPFLEVTLVPENELRKATLNIFFDMMEC 860 (1561)
Q Consensus 805 ~R~~~a~ll~~~W~~Lg~~q~~fip~Lv~~iLe~cls~~~~lR~~a~~il~~mm~~ 860 (1561)
+|..++..+..+=..+|..=..|++.++.++++..-.+...+|..|...+..++.+
T Consensus 73 V~~~a~~~l~~la~~l~~~~~~~~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~ 128 (242)
T 2qk2_A 73 LVAMAGKCLALLAKGLAKRFSNYASACVPSLLEKFKEKKPNVVTALREAIDAIYAS 128 (242)
T ss_dssp HHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHc
Confidence 45555555666556666533457788999999998889999999999999988764
No 83
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=35.03 E-value=2.3e+02 Score=27.20 Aligned_cols=67 Identities=9% Similarity=-0.059 Sum_probs=47.2
Q ss_pred HHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHHH
Q psy8415 968 RYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLCK 1047 (1561)
Q Consensus 968 ryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~k 1047 (1561)
.+.+.|+..+...|+|.+|.-++.....+- ++ .+ ..+......+..-+.|+.|+..|+
T Consensus 53 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~---p~----------~~---------~~~~~lg~~~~~~g~~~~A~~~~~ 110 (142)
T 2xcb_A 53 RYFLGLGACRQSLGLYEQALQSYSYGALMD---IN----------EP---------RFPFHAAECHLQLGDLDGAESGFY 110 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TT----------CT---------HHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhcC---CC----------Cc---------HHHHHHHHHHHHcCCHHHHHHHHH
Confidence 445678889999999999998887655542 21 00 234455566667788999999999
Q ss_pred HHHHHHHHh
Q psy8415 1048 ELADLYEKR 1056 (1561)
Q Consensus 1048 eL~~~YE~~ 1056 (1561)
..+...-..
T Consensus 111 ~al~~~p~~ 119 (142)
T 2xcb_A 111 SARALAAAQ 119 (142)
T ss_dssp HHHHHHHTC
T ss_pred HHHHhCCCC
Confidence 988776644
No 84
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=34.65 E-value=2.6e+02 Score=31.77 Aligned_cols=36 Identities=6% Similarity=0.040 Sum_probs=19.6
Q ss_pred cCChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHH
Q psy8415 960 INRKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYAD 995 (1561)
Q Consensus 960 ~~r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ 995 (1561)
.+++.......+.|+..+...|++.+|--.+..-.+
T Consensus 134 ~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~ 169 (378)
T 3q15_A 134 VSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALD 169 (378)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 344444555556666666666666666555544333
No 85
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=34.31 E-value=33 Score=44.87 Aligned_cols=64 Identities=14% Similarity=0.232 Sum_probs=39.7
Q ss_pred ceEEEEEEEec-CCCcccee-EEEe-eccccccCcEEEEEEeeccccccccCCcceEEEEeeccCCCCceecCCceEEEE
Q psy8415 236 SEYHSMIIYHH-NSPCWSEI-IRLA-VPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLMEPSGATLQDCQHELFI 312 (1561)
Q Consensus 236 s~~~S~V~yHn-~~P~w~Ee-IKi~-LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~~~g~~l~DG~h~L~V 312 (1561)
..++|-|...| -+|.|+|+ +... ++... -+-|+|+.+.- .+ ..+|-+.+||-. |+.|...+|+
T Consensus 685 ~k~kTkvv~~nglNPvWNE~~F~F~~v~~pe--la~Lrf~V~D~-----dd--dfiG~~~ipL~~-----L~~GyR~vpL 750 (816)
T 3qr0_A 685 KKFKTKIIENNGMDPYYDEKVFVFKKVVLPD--LAVVRIIVSEE-----NG--KFIGHRVMPLDG-----IKPGYRHVPL 750 (816)
T ss_dssp EEEECCCBCSCSSCCBCCCCCEEEEEESCGG--GCEEEEEEEET-----TS--CEEEEEEEESTT-----CCCEEEEEEE
T ss_pred ceeeeEEecCCCCCCeEcCceeEEccccCCC--ccEEEEEEEec-----CC--CeeeEEEEEHHH-----cCCcceEEEE
Confidence 46788887765 78999998 7665 43222 25788987642 12 455666666543 4445555555
Q ss_pred E
Q psy8415 313 Y 313 (1561)
Q Consensus 313 y 313 (1561)
+
T Consensus 751 ~ 751 (816)
T 3qr0_A 751 R 751 (816)
T ss_dssp E
T ss_pred e
Confidence 4
No 86
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=34.26 E-value=98 Score=30.66 Aligned_cols=23 Identities=13% Similarity=0.252 Sum_probs=13.4
Q ss_pred HHHHHHHHHccCCChHHHHHHHH
Q psy8415 969 YIYKLHDLHRPADNFTEAGFTLK 991 (1561)
Q Consensus 969 yv~~La~lH~~~~Ny~EAAl~L~ 991 (1561)
.++.++..+...|+|.||.-++.
T Consensus 23 ~~~~~g~~~~~~g~~~~A~~~~~ 45 (148)
T 2vgx_A 23 QLYSLAFNQYQSGXYEDAHXVFQ 45 (148)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHH
Confidence 34455666666666666655554
No 87
>1jf3_A Monomer hemoglobin component III; oxygen storage/transport complex; HET: HEM; 1.40A {Glycera dibranchiata} SCOP: a.1.1.2 PDB: 1jl7_A* 1jf4_A* 1jl6_A* 1vre_A* 1vrf_A* 1hbg_A* 2hbg_A*
Probab=33.54 E-value=1.2e+02 Score=30.39 Aligned_cols=40 Identities=10% Similarity=0.115 Sum_probs=30.6
Q ss_pred hcCChhHHHHHHHHHHHHHccCC-------ChHHHHHHHHH-HHHHcC
Q psy8415 959 EINRKEMYLRYIYKLHDLHRPAD-------NFTEAGFTLKL-YADSLS 998 (1561)
Q Consensus 959 ~~~r~emyiryv~~La~lH~~~~-------Ny~EAAl~L~l-hA~ll~ 998 (1561)
..++++....++.+|+..|...| +|..-+-||+- .++.+.
T Consensus 72 ~ld~~~~l~~~l~~L~~~H~~~g~l~V~p~~f~~~~~~Ll~~l~~~lg 119 (147)
T 1jf3_A 72 HLGDEGKMVAEMKAVGVRHKGYGNKHIKAEYFEPLGASLLSAMEHRIG 119 (147)
T ss_dssp TTTSHHHHHHHHHHHHHHGGGSTTSCCCGGGHHHHHHHHHHHHHHHHG
T ss_pred hCCCHHHHHHHHHHHHHHHHhccCCCcCHHHHHHHHHHHHHHHHHHhc
Confidence 56788888899999999999976 78777877763 345443
No 88
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=33.49 E-value=67 Score=29.62 Aligned_cols=79 Identities=11% Similarity=0.099 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHH
Q psy8415 967 LRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLC 1046 (1561)
Q Consensus 967 iryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~ 1046 (1561)
..-...++..+...|+|.+|.-++....+. ++ + . ...+...+..+.+.+.|+.|+..+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---~~-~---------~---------~~~~~~la~~~~~~~~~~~A~~~~ 73 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKR---NP-K---------D---------AKLYSNRAACYTKLLEFQLALKDC 73 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTT---CT-T---------C---------HHHHHHHHHHHTTTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc---CC-C---------c---------HHHHHHHHHHHHHhccHHHHHHHH
Confidence 344566788888999999998777644332 11 0 0 134555666667777888888888
Q ss_pred HHHHHHHHHhhhcHHHHHHHH
Q psy8415 1047 KELADLYEKRLFDYKKLSNIL 1067 (1561)
Q Consensus 1047 keL~~~YE~~~~Dy~kLs~i~ 1067 (1561)
+..+........=+..++.++
T Consensus 74 ~~a~~~~~~~~~~~~~la~~~ 94 (133)
T 2lni_A 74 EECIQLEPTFIKGYTRKAAAL 94 (133)
T ss_dssp HHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHhCCCchHHHHHHHHHH
Confidence 888775443322233344444
No 89
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=33.47 E-value=1.4e+02 Score=32.88 Aligned_cols=96 Identities=4% Similarity=-0.022 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHH
Q psy8415 966 YLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPL 1045 (1561)
Q Consensus 966 yiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l 1045 (1561)
.+.-...|+..+...|+|.+|--++...-+.+.-.+ . .......+|..+...+.+-+.|+.|+..
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~-------------~--~~~~~~~~~~nlg~~y~~~~~y~~A~~~ 218 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALH-------------D--NEEFDVKVRYNHAKALYLDSRYEESLYQ 218 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSS-------------C--CHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc-------------c--chhHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 344567788888889999888877765444331111 0 1123334666677777777889999999
Q ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHH
Q psy8415 1046 CKELADLYEKRLFDYKKLSNILQTQAQFCDNI 1077 (1561)
Q Consensus 1046 ~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~I 1077 (1561)
++..+...... -+...++.++..++.+|.+.
T Consensus 219 ~~~al~~~~~~-~~~~~~~~~~~~lg~~~~~~ 249 (293)
T 3u3w_A 219 VNKAIEISCRI-NSMALIGQLYYQRGECLRKL 249 (293)
T ss_dssp HHHHHHHHHHT-TBCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHc-CcHHHHHHHHHHHHHHHHHh
Confidence 99999888775 66666777777777777654
No 90
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=33.18 E-value=1.3e+02 Score=26.90 Aligned_cols=64 Identities=13% Similarity=0.151 Sum_probs=43.6
Q ss_pred HHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHHHH
Q psy8415 969 YIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLCKE 1048 (1561)
Q Consensus 969 yv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~ke 1048 (1561)
....++..+...|++.+|.-.+....+. ++ . . ...+...+..+.+.+.++.|+..++.
T Consensus 45 ~~~~la~~~~~~~~~~~A~~~~~~~~~~---~~-~------------~------~~~~~~la~~~~~~~~~~~A~~~~~~ 102 (125)
T 1na0_A 45 AWYNLGNAYYKQGDYDEAIEYYQKALEL---DP-N------------N------AEAWYNLGNAYYKQGDYDEAIEYYQK 102 (125)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH---CT-T------------C------HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHh---CC-c------------c------HHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 4467788888999999988777554433 11 0 0 12344556666677889999999998
Q ss_pred HHHHHH
Q psy8415 1049 LADLYE 1054 (1561)
Q Consensus 1049 L~~~YE 1054 (1561)
.+....
T Consensus 103 ~~~~~~ 108 (125)
T 1na0_A 103 ALELDP 108 (125)
T ss_dssp HHHHCT
T ss_pred HHHhCC
Confidence 876543
No 91
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=31.34 E-value=1.1e+02 Score=29.66 Aligned_cols=82 Identities=9% Similarity=-0.064 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHH
Q psy8415 967 LRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLC 1046 (1561)
Q Consensus 967 iryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~ 1046 (1561)
...++.++..+...|+|.||.-.+...... ++++ ...+......+.+-+.|+.|+..|
T Consensus 18 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~---~p~~-------------------~~~~~~lg~~~~~~g~~~~A~~~~ 75 (142)
T 2xcb_A 18 LEQLYALGFNQYQAGKWDDAQKIFQALCML---DHYD-------------------ARYFLGLGACRQSLGLYEQALQSY 75 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTC-------------------HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHh---CCcc-------------------HHHHHHHHHHHHHHhhHHHHHHHH
Confidence 455678899999999999998777544332 2200 023344455566667888999998
Q ss_pred HHHHHHHHHhhhcHHHHHHHHHHH
Q psy8415 1047 KELADLYEKRLFDYKKLSNILQTQ 1070 (1561)
Q Consensus 1047 keL~~~YE~~~~Dy~kLs~i~~~~ 1070 (1561)
+..+...-....-|-.|+.++..+
T Consensus 76 ~~al~~~p~~~~~~~~lg~~~~~~ 99 (142)
T 2xcb_A 76 SYGALMDINEPRFPFHAAECHLQL 99 (142)
T ss_dssp HHHHHHCTTCTHHHHHHHHHHHHT
T ss_pred HHHHhcCCCCcHHHHHHHHHHHHc
Confidence 888776544333344555555443
No 92
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=31.23 E-value=1.5e+02 Score=26.76 Aligned_cols=29 Identities=10% Similarity=0.011 Sum_probs=17.5
Q ss_pred HHHHHHHHHHcccchhhhHHHHHHHHHHH
Q psy8415 1025 LYYEIISYFDKGKCWEKGIPLCKELADLY 1053 (1561)
Q Consensus 1025 L~~~~i~~f~kg~~wE~ai~l~keL~~~Y 1053 (1561)
.+...+..+.+.+.|+.|+..++..+...
T Consensus 82 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 110 (131)
T 2vyi_A 82 AYGRMGLALSSLNKHVEAVAYYKKALELD 110 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 34445555556666777777777666543
No 93
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=30.56 E-value=1.3e+02 Score=33.16 Aligned_cols=99 Identities=4% Similarity=-0.040 Sum_probs=63.9
Q ss_pred hhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhh
Q psy8415 963 KEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKG 1042 (1561)
Q Consensus 963 ~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~a 1042 (1561)
+.......+.|+..+...|+|.+|--++...-+++.-.+ + ........+..+...+.+-+.|+.|
T Consensus 151 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~-~--------------~~~~~~~~~~nlg~~y~~~~~y~~A 215 (293)
T 2qfc_A 151 VYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALH-D--------------NEEFDVKVRYNHAKALYLDSRYEES 215 (293)
T ss_dssp TTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC-C--------------CHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcC-c--------------cccchHHHHHhHHHHHHHHhhHHHH
Confidence 333455677889999999999999887765444332111 0 0111114556666677777889999
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHH
Q psy8415 1043 IPLCKELADLYEKRLFDYKKLSNILQTQAQFCDNI 1077 (1561)
Q Consensus 1043 i~l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~I 1077 (1561)
+..++..+...... -+...++.++..++.+|.+.
T Consensus 216 l~~~~kal~~~~~~-~~~~~~~~~~~~lg~~y~~~ 249 (293)
T 2qfc_A 216 LYQVNKAIEISCRI-NSMALIGQLYYQRGECLRKL 249 (293)
T ss_dssp HHHHHHHHHHHHHT-TBCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHc
Confidence 99999988877653 44444566666666666554
No 94
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=30.19 E-value=1.8e+02 Score=28.67 Aligned_cols=63 Identities=10% Similarity=0.079 Sum_probs=41.8
Q ss_pred HHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHHHHHH
Q psy8415 971 YKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLCKELA 1050 (1561)
Q Consensus 971 ~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~keL~ 1050 (1561)
+.|+.++.+.|+|.+|--++...-++ +++ . ...+......+.+-+.|+.|+..|+..+
T Consensus 35 ~~la~~y~~~~~~~~A~~~~~~al~~---~p~----------~---------~~a~~~lg~~~~~~~~~~~A~~~~~~al 92 (150)
T 4ga2_A 35 FYFAKLYYEAKEYDLAKKYICTYINV---QER----------D---------PKAHRFLGLLYELEENTDKAVECYRRSV 92 (150)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH---CTT----------C---------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh---CCC----------C---------HHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 46888999999999988777654433 221 0 1234455556666677888888888887
Q ss_pred HHHHH
Q psy8415 1051 DLYEK 1055 (1561)
Q Consensus 1051 ~~YE~ 1055 (1561)
..--.
T Consensus 93 ~~~p~ 97 (150)
T 4ga2_A 93 ELNPT 97 (150)
T ss_dssp HHCTT
T ss_pred HhCCC
Confidence 65443
No 95
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=29.47 E-value=1.2e+02 Score=28.84 Aligned_cols=89 Identities=10% Similarity=-0.040 Sum_probs=53.3
Q ss_pred ChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhh
Q psy8415 962 RKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEK 1041 (1561)
Q Consensus 962 r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ 1041 (1561)
+|-+.....+.++..+.+.|+|.+|.-++...... ++ + . - ..+......+.+.+.|+.
T Consensus 12 ~p~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~---~P-~---------~--------~-~a~~~lg~~~~~~g~~~~ 69 (121)
T 1hxi_A 12 NPYMYHENPMEEGLSMLKLANLAEAALAFEAVCQK---EP-E---------R--------E-EAWRSLGLTQAENEKDGL 69 (121)
T ss_dssp CGGGGCSCHHHHHHHHHHTTCHHHHHHHHHHHHHH---ST-T---------C--------H-HHHHHHHHHHHHTTCHHH
T ss_pred CccccchhHHHHHHHHHHcCCHHHHHHHHHHHHHH---CC-C---------C--------H-HHHHHHHHHHHHcCCHHH
Confidence 34333344567888899999999998887654443 22 0 0 0 223334445556677888
Q ss_pred hHHHHHHHHHHHHHhhhcHHHHHHHHHHHHH
Q psy8415 1042 GIPLCKELADLYEKRLFDYKKLSNILQTQAQ 1072 (1561)
Q Consensus 1042 ai~l~keL~~~YE~~~~Dy~kLs~i~~~~a~ 1072 (1561)
|+..|+..+..--....-+..|+.++..+.+
T Consensus 70 A~~~~~~al~l~P~~~~~~~~la~~~~~~g~ 100 (121)
T 1hxi_A 70 AIIALNHARMLDPKDIAVHAALAVSHTNEHN 100 (121)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 9988888776543332334456666655443
No 96
>2wtg_A Globin-like protein; metal-binding, oxygen transport; HET: HEM; 1.50A {Caenorhabditis elegans} PDB: 2wth_A*
Probab=29.39 E-value=67 Score=33.52 Aligned_cols=43 Identities=12% Similarity=0.038 Sum_probs=31.8
Q ss_pred hcCChhHHHHHHHHHHHHHccC----CChHHHHHHHHH-HHHHcCccC
Q psy8415 959 EINRKEMYLRYIYKLHDLHRPA----DNFTEAGFTLKL-YADSLSWTS 1001 (1561)
Q Consensus 959 ~~~r~emyiryv~~La~lH~~~----~Ny~EAAl~L~l-hA~ll~W~~ 1001 (1561)
..++++.+.-++.+|+..|.+. ..|...+-+|+- .++.+.|++
T Consensus 83 ~lDd~~~L~~~l~~L~~~H~~~gV~~ehy~~v~~~Ll~~L~~~l~~t~ 130 (159)
T 2wtg_A 83 VYTNEEVFKGYVRETINRHRIYKMDPALWMAFFTVFTGYLESVGSLND 130 (159)
T ss_dssp HTTSHHHHHHHHHHHHHHHGGGCCCTTHHHHHHHHHHHHHTTTSCCCH
T ss_pred hcCCHHHHHHHHHHHHHHHhHcCCCHHHHHHHHHHHHHHHHHHcCCCH
Confidence 6799999999999999999875 456666766653 344445544
No 97
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=29.30 E-value=1.1e+02 Score=28.47 Aligned_cols=24 Identities=4% Similarity=-0.220 Sum_probs=16.8
Q ss_pred HHHHHHHHccCCChHHHHHHHHHH
Q psy8415 970 IYKLHDLHRPADNFTEAGFTLKLY 993 (1561)
Q Consensus 970 v~~La~lH~~~~Ny~EAAl~L~lh 993 (1561)
...++..+...|+|.+|.-++...
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~a 30 (126)
T 3upv_A 7 ARLEGKEYFTKSDWPNAVKAYTEM 30 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHH
Confidence 455677777888888887766543
No 98
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=29.00 E-value=1.9e+02 Score=29.45 Aligned_cols=95 Identities=13% Similarity=0.014 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCC----chhhhHHHHHHHHHHHHHcccchhhh
Q psy8415 967 LRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGA----PEWYRKEQLYYEIISYFDKGKCWEKG 1042 (1561)
Q Consensus 967 iryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~q----t~~erKE~L~~~~i~~f~kg~~wE~a 1042 (1561)
...+..++..+...|+|.+|.-++....++..-+. .+... .....+..++...+..+.+-+.|+.|
T Consensus 38 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 107 (198)
T 2fbn_A 38 AFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTE----------EWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKA 107 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCT----------TCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccc----------ccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 34456789999999999999988876655543322 11111 01122235666677777788899999
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHHHHHH
Q psy8415 1043 IPLCKELADLYEKRLFDYKKLSNILQTQA 1071 (1561)
Q Consensus 1043 i~l~keL~~~YE~~~~Dy~kLs~i~~~~a 1071 (1561)
+..|+..+........-|-.++.++..+.
T Consensus 108 ~~~~~~al~~~p~~~~~~~~lg~~~~~~~ 136 (198)
T 2fbn_A 108 IDHASKVLKIDKNNVKALYKLGVANMYFG 136 (198)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHcc
Confidence 99999998875544333455555554443
No 99
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.96 E-value=1.6e+02 Score=27.62 Aligned_cols=83 Identities=8% Similarity=-0.080 Sum_probs=49.8
Q ss_pred HHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHHH
Q psy8415 968 RYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLCK 1047 (1561)
Q Consensus 968 ryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~k 1047 (1561)
...+.++..+...|+|.+|.-++....+. +++ .......+...+..+.+.+.|+.|+..|+
T Consensus 29 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~---~~~----------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 89 (148)
T 2dba_A 29 EQLRKEGNELFKCGDYGGALAAYTQALGL---DAT----------------PQDQAVLHRNRAACHLKLEDYDKAETEAS 89 (148)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHTS---CCC----------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHH---ccc----------------chHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 44567788888999999988776543321 210 01123455556666667778888888888
Q ss_pred HHHHHHHHhhhcHHHHHHHHHH
Q psy8415 1048 ELADLYEKRLFDYKKLSNILQT 1069 (1561)
Q Consensus 1048 eL~~~YE~~~~Dy~kLs~i~~~ 1069 (1561)
..+........=+..++.++..
T Consensus 90 ~~~~~~~~~~~~~~~~a~~~~~ 111 (148)
T 2dba_A 90 KAIEKDGGDVKALYRRSQALEK 111 (148)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHhhCccCHHHHHHHHHHHHH
Confidence 8877644332223344444443
No 100
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=28.24 E-value=1.4e+02 Score=27.14 Aligned_cols=71 Identities=8% Similarity=0.043 Sum_probs=47.5
Q ss_pred HHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHHH
Q psy8415 968 RYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLCK 1047 (1561)
Q Consensus 968 ryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~k 1047 (1561)
...+.++..+...|+|.+|.-++....++..-+. .........+...+..+.+.+.|+.|+..++
T Consensus 39 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 103 (131)
T 1elr_A 39 TYITNQAAVYFEKGDYNKCRELCEKAIEVGRENR---------------EDYRQIAKAYARIGNSYFKEEKYKDAIHFYN 103 (131)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHST---------------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhccccc---------------hhHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 4456788888889999999887765544332111 0012223455666777777889999999999
Q ss_pred HHHHHH
Q psy8415 1048 ELADLY 1053 (1561)
Q Consensus 1048 eL~~~Y 1053 (1561)
..+...
T Consensus 104 ~~~~~~ 109 (131)
T 1elr_A 104 KSLAEH 109 (131)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 888754
No 101
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=28.09 E-value=1.3e+02 Score=28.91 Aligned_cols=24 Identities=0% Similarity=-0.164 Sum_probs=12.0
Q ss_pred HHHHHHcccchhhhHHHHHHHHHH
Q psy8415 1029 IISYFDKGKCWEKGIPLCKELADL 1052 (1561)
Q Consensus 1029 ~i~~f~kg~~wE~ai~l~keL~~~ 1052 (1561)
.+..+.+.+.++.|+..++..+..
T Consensus 87 ~a~~~~~~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 87 RAASNMALGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHh
Confidence 333444444555555555555543
No 102
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=27.88 E-value=41 Score=32.90 Aligned_cols=28 Identities=11% Similarity=0.132 Sum_probs=15.7
Q ss_pred HHHHHHHHcccchhhhHHHHHHHHHHHH
Q psy8415 1027 YEIISYFDKGKCWEKGIPLCKELADLYE 1054 (1561)
Q Consensus 1027 ~~~i~~f~kg~~wE~ai~l~keL~~~YE 1054 (1561)
...+..+...+.|+.|+..++.......
T Consensus 80 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 107 (186)
T 3as5_A 80 TVLGLTYVQVQKYDLAVPLLIKVAEANP 107 (186)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCc
Confidence 3444445555566666666666665443
No 103
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=27.72 E-value=1.9e+02 Score=26.10 Aligned_cols=20 Identities=10% Similarity=-0.046 Sum_probs=9.4
Q ss_pred HHHHHHccCCChHHHHHHHH
Q psy8415 972 KLHDLHRPADNFTEAGFTLK 991 (1561)
Q Consensus 972 ~La~lH~~~~Ny~EAAl~L~ 991 (1561)
.++..+...|+|.+|--++.
T Consensus 51 ~~a~~~~~~~~~~~A~~~~~ 70 (131)
T 2vyi_A 51 NRAAAYSKLGNYAGAVQDCE 70 (131)
T ss_dssp HHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHhhchHHHHHHHH
Confidence 34444444555555444443
No 104
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=27.25 E-value=3.2e+02 Score=29.05 Aligned_cols=82 Identities=9% Similarity=0.000 Sum_probs=53.0
Q ss_pred CChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchh
Q psy8415 961 NRKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWE 1040 (1561)
Q Consensus 961 ~r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE 1040 (1561)
.+..........|+..+...|+|.+|--++...-++..-.... .. ......+...+..+.+.+.|+
T Consensus 105 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~--------~~------~~~~~~~~~la~~~~~~~~~~ 170 (311)
T 3nf1_A 105 KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGK--------DH------PDVAKQLNNLALLCQNQGKYE 170 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCT--------TC------HHHHHHHHHHHHHHHTTTCHH
T ss_pred CCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCC--------CC------hHHHHHHHHHHHHHHHcCCHH
Confidence 3344556677788999999999999988776544433111000 00 111245566677777778889
Q ss_pred hhHHHHHHHHHHHHHh
Q psy8415 1041 KGIPLCKELADLYEKR 1056 (1561)
Q Consensus 1041 ~ai~l~keL~~~YE~~ 1056 (1561)
.|+.+++..+..++..
T Consensus 171 ~A~~~~~~a~~~~~~~ 186 (311)
T 3nf1_A 171 EVEYYYQRALEIYQTK 186 (311)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999998888886653
No 105
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=27.03 E-value=1.2e+03 Score=30.71 Aligned_cols=37 Identities=14% Similarity=0.117 Sum_probs=28.0
Q ss_pred hccHHHHHHHHHhhcccCCCcccchhhHHHHHHHHHHHhh
Q psy8415 407 KFLQDILDALFSMFSTEDGNSTMHSGLVFHVLTHIFSLLY 446 (1561)
Q Consensus 407 KFL~~IlDaLF~IL~~~~~~s~~~~~lVF~aLV~Ii~lv~ 446 (1561)
.|+++|++.|+.++ .... .+ -...+++|+..|++.+.
T Consensus 585 p~~~~il~~l~~~~-~~~~-~~-~~~~~~eai~~ii~~~~ 621 (1049)
T 3m1i_C 585 PFIQTIIRDIQKTT-ADLQ-PQ-QVHTFYKACGIIISEER 621 (1049)
T ss_dssp CHHHHHHHTHHHHH-TTSC-HH-HHHHHHHHHHHHHHTCC
T ss_pred cHHHHHHHHHHHHH-HhCC-HH-HHHHHHHHHHHHHHcCC
Confidence 89999999999999 3221 11 23567899999998776
No 106
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=26.83 E-value=1.5e+02 Score=31.12 Aligned_cols=83 Identities=7% Similarity=0.010 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhh
Q psy8415 963 KEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKG 1042 (1561)
Q Consensus 963 ~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~a 1042 (1561)
+.-.....+.++..+...|+|.+|--++....++ ++ .. ...+...+..+.+.+.|+.|
T Consensus 39 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~---~~----------~~---------~~~~~~la~~~~~~~~~~~A 96 (275)
T 1xnf_A 39 DDERAQLLYERGVLYDSLGLRALARNDFSQALAI---RP----------DM---------PEVFNYLGIYLTQAGNFDAA 96 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CC----------CC---------HHHHHHHHHHHHHTTCHHHH
T ss_pred CchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHc---CC----------Cc---------HHHHHHHHHHHHHccCHHHH
Confidence 3345566677788888888888887777654443 11 00 12334445555566677777
Q ss_pred HHHHHHHHHHHHHhhhcHHHHHHHH
Q psy8415 1043 IPLCKELADLYEKRLFDYKKLSNIL 1067 (1561)
Q Consensus 1043 i~l~keL~~~YE~~~~Dy~kLs~i~ 1067 (1561)
+..|+..+........-|..|+.++
T Consensus 97 ~~~~~~al~~~~~~~~~~~~la~~~ 121 (275)
T 1xnf_A 97 YEAFDSVLELDPTYNYAHLNRGIAL 121 (275)
T ss_dssp HHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred HHHHHHHHhcCccccHHHHHHHHHH
Confidence 7777777765544333344444444
No 107
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=26.04 E-value=1.5e+02 Score=27.69 Aligned_cols=30 Identities=7% Similarity=0.012 Sum_probs=19.3
Q ss_pred HHHHHHHHHcccchhhhHHHHHHHHHHHHH
Q psy8415 1026 YYEIISYFDKGKCWEKGIPLCKELADLYEK 1055 (1561)
Q Consensus 1026 ~~~~i~~f~kg~~wE~ai~l~keL~~~YE~ 1055 (1561)
+......+.+-+.|+.|+..|+..+.....
T Consensus 80 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 80 HFFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 344445555556677788777777776665
No 108
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=26.02 E-value=3.7e+02 Score=27.92 Aligned_cols=102 Identities=11% Similarity=-0.035 Sum_probs=60.8
Q ss_pred CChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchh
Q psy8415 961 NRKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWE 1040 (1561)
Q Consensus 961 ~r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE 1040 (1561)
++..........|+..+...|+|.+|.-++....++..=.. . +.. ...-..+...+..+..-+.|+
T Consensus 79 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~-~-------~~~------~~~~~~~~~la~~~~~~g~~~ 144 (283)
T 3edt_B 79 KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVL-G-------KFH------PDVAKQLNNLALLCQNQGKAE 144 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH-C-------TTC------HHHHHHHHHHHHHHHTTTCHH
T ss_pred CcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHc-C-------CCC------hHHHHHHHHHHHHHHHcCCHH
Confidence 34445666778899999999999999887765444431110 0 000 011235566666777778889
Q ss_pred hhHHHHHHHHHHHHHhh-hcHHHHHHHHHHHHHHHHH
Q psy8415 1041 KGIPLCKELADLYEKRL-FDYKKLSNILQTQAQFCDN 1076 (1561)
Q Consensus 1041 ~ai~l~keL~~~YE~~~-~Dy~kLs~i~~~~a~lY~~ 1076 (1561)
.|+..++..+..++... -|....+.++..++.+|..
T Consensus 145 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~ 181 (283)
T 3edt_B 145 EVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK 181 (283)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 99999998888865531 1122334444444444433
No 109
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=25.27 E-value=2.2e+02 Score=29.37 Aligned_cols=93 Identities=14% Similarity=-0.046 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHH
Q psy8415 966 YLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPL 1045 (1561)
Q Consensus 966 yiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l 1045 (1561)
.....+.|+..+...|+|.+|--++....++..-+. .-.......+......+.+.+.|+.|+..
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~~~~~~~~~g~~~~~~~~~~~A~~~ 139 (228)
T 4i17_A 75 LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNA---------------TIEKLYAIYYLKEGQKFQQAGNIEKAEEN 139 (228)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH---------------HHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH---------------HHHHHHHHHHHHHhHHHHHhccHHHHHHH
Confidence 345566789999999999999888865544421110 01122223556666777777899999999
Q ss_pred HHHHHHHHHH--hhhcHHHHHHHHHHHHHH
Q psy8415 1046 CKELADLYEK--RLFDYKKLSNILQTQAQF 1073 (1561)
Q Consensus 1046 ~keL~~~YE~--~~~Dy~kLs~i~~~~a~l 1073 (1561)
|+..+..... ...-|..|+.++..++..
T Consensus 140 ~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 140 YKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 9998876444 334566777777777665
No 110
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=24.97 E-value=1.2e+03 Score=29.81 Aligned_cols=76 Identities=9% Similarity=0.125 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHhccccccccc--ccchHHHHHHcCCCchHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHH
Q psy8415 805 MRVQMGFQILKVWSSLGEHKINFI--PSMVGPFLEVTLVPENELRKATLNIFFDMMECEQRVHGNFKQVESELIDKLDIL 882 (1561)
Q Consensus 805 ~R~~~a~ll~~~W~~Lg~~q~~fi--p~Lv~~iLe~cls~~~~lR~~a~~il~~mm~~E~~~~~~f~~ve~eiI~~Ld~L 882 (1561)
+|..+...+..+=..+|+.=..|+ +.++.-++++...+.+.+|+.|...+-++...- .+.|...-.+++..|...
T Consensus 602 ~~~~~l~~l~~l~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~---~~~~~~~l~~~lp~l~~~ 678 (852)
T 4fdd_A 602 FMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKAC---FQHVKPCIADFMPILGTN 678 (852)
T ss_dssp HHHHHHHHHHHHHHHHGGGGHHHHHTCCHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHC---GGGTGGGHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhHhHHHHhcCCcHHHHHHHHhCCCChhHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHH
Confidence 444444555555566665444454 677777777666677899999999998877532 234544444455555555
Q ss_pred h
Q psy8415 883 I 883 (1561)
Q Consensus 883 v 883 (1561)
+
T Consensus 679 l 679 (852)
T 4fdd_A 679 L 679 (852)
T ss_dssp C
T ss_pred c
Confidence 5
No 111
>3pt8_B Hemoglobin III; oxygen carrier, oxygen transport; HET: HEM; 1.76A {Lucina pectinata} PDB: 3pt7_B*
Probab=24.46 E-value=2.2e+02 Score=28.73 Aligned_cols=43 Identities=16% Similarity=0.179 Sum_probs=30.0
Q ss_pred hcCChhHHHHHHHHHHHHHccCC----ChHHHHHHHHH-HHHHcCccC
Q psy8415 959 EINRKEMYLRYIYKLHDLHRPAD----NFTEAGFTLKL-YADSLSWTS 1001 (1561)
Q Consensus 959 ~~~r~emyiryv~~La~lH~~~~----Ny~EAAl~L~l-hA~ll~W~~ 1001 (1561)
.+++++....++.+|+..|.+.| +|..-|-||+- .++.+.|++
T Consensus 80 ~ldd~~~l~~~l~~L~~~H~~~gV~p~~f~~~~~~ll~~l~~~lg~t~ 127 (152)
T 3pt8_B 80 NLDDHEVLVVLLQKMAKLHFNRGIRIKELRDGYGTLLRYLEDHCHVEG 127 (152)
T ss_dssp TTTCHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTSCCH
T ss_pred hCCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHcCCCH
Confidence 66888888899999999998654 55556666653 344454543
No 112
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=24.12 E-value=4.1e+02 Score=26.30 Aligned_cols=104 Identities=5% Similarity=-0.031 Sum_probs=70.7
Q ss_pred HHHHHHhhcC-ChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHH
Q psy8415 952 LLNFYKNEIN-RKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEII 1030 (1561)
Q Consensus 952 Ll~fyk~~~~-r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i 1030 (1561)
.+..++ ..+ ++.........|+..+...|++.+|.-++.---++..-.. .. ...-..+....
T Consensus 92 al~~~~-~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~---------------~~-~~~~~~~~~la 154 (203)
T 3gw4_A 92 ERELLA-SLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQAD---------------DQ-VAIACAFRGLG 154 (203)
T ss_dssp HHHHHH-HSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT---------------CH-HHHHHHHHHHH
T ss_pred HHHHHH-HcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc---------------ch-HHHHHHHHHHH
Confidence 333334 344 5556677778899999999999998877764433321111 00 11123455666
Q ss_pred HHHHcccchhhhHHHHHHHHHHHHHhhhcHHHHHHHHHHHHHH
Q psy8415 1031 SYFDKGKCWEKGIPLCKELADLYEKRLFDYKKLSNILQTQAQF 1073 (1561)
Q Consensus 1031 ~~f~kg~~wE~ai~l~keL~~~YE~~~~Dy~kLs~i~~~~a~l 1073 (1561)
..+.+.+.|+.|+..+++.+..++.. -|-...+.++..++.+
T Consensus 155 ~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~ 196 (203)
T 3gw4_A 155 DLAQQEKNLLEAQQHWLRARDIFAEL-EDSEAVNELMTRLNGL 196 (203)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHTT
T ss_pred HHHHHCcCHHHHHHHHHHHHHHHHHc-CCHHHHHHHHhcccch
Confidence 77777789999999999999999986 7877888888777665
No 113
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=23.91 E-value=2.7e+02 Score=27.27 Aligned_cols=67 Identities=4% Similarity=-0.117 Sum_probs=47.3
Q ss_pred HHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHHH
Q psy8415 968 RYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLCK 1047 (1561)
Q Consensus 968 ryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~k 1047 (1561)
...+.|+..+...|+|.+|--++....++ ++ + . ...+......+.+-+.|+.|+..|+
T Consensus 46 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~---~p-~---------~---------~~~~~~lg~~~~~~g~~~~A~~~~~ 103 (164)
T 3sz7_A 46 IYLSNRAAAYSASGQHEKAAEDAELATVV---DP-K---------Y---------SKAWSRLGLARFDMADYKGAKEAYE 103 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CT-T---------C---------HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHh---CC-C---------C---------HHHHHHHHHHHHHccCHHHHHHHHH
Confidence 45567888999999999998877654443 22 1 0 1334455566666678999999999
Q ss_pred HHHHHHHHh
Q psy8415 1048 ELADLYEKR 1056 (1561)
Q Consensus 1048 eL~~~YE~~ 1056 (1561)
..+......
T Consensus 104 ~al~~~p~~ 112 (164)
T 3sz7_A 104 KGIEAEGNG 112 (164)
T ss_dssp HHHHHHSSS
T ss_pred HHHHhCCCc
Confidence 999877654
No 114
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=23.65 E-value=2.3e+02 Score=26.03 Aligned_cols=65 Identities=8% Similarity=0.106 Sum_probs=35.0
Q ss_pred HHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHHHHHH
Q psy8415 971 YKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLCKELA 1050 (1561)
Q Consensus 971 ~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~keL~ 1050 (1561)
+.++..+...|+|.+|.-.+....+.. ++.. .....+......+.+.+.|+.|+..|+.++
T Consensus 6 ~~~a~~~~~~~~~~~A~~~~~~~~~~~---p~~~----------------~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~ 66 (129)
T 2xev_A 6 YNVAFDALKNGKYDDASQLFLSFLELY---PNGV----------------YTPNALYWLGESYYATRNFQLAEAQFRDLV 66 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC---SSST----------------THHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHC---CCCc----------------ccHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 456777777888888876665443332 1000 001222333344444556777777777766
Q ss_pred HHHH
Q psy8415 1051 DLYE 1054 (1561)
Q Consensus 1051 ~~YE 1054 (1561)
..+.
T Consensus 67 ~~~p 70 (129)
T 2xev_A 67 SRYP 70 (129)
T ss_dssp HHCT
T ss_pred HHCC
Confidence 6543
No 115
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=23.42 E-value=1.6e+02 Score=28.17 Aligned_cols=78 Identities=12% Similarity=0.065 Sum_probs=47.0
Q ss_pred HHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHHHHHH
Q psy8415 971 YKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLCKELA 1050 (1561)
Q Consensus 971 ~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~keL~ 1050 (1561)
..+...+.+.|+|.||--++...-++ +++ . ...+......+.+-+.|+.|+..|+..+
T Consensus 17 ~~~G~~~~~~g~~~~A~~~~~~al~~---~p~----------~---------~~~~~~~~~~~~~~~~~~~A~~~~~~al 74 (126)
T 4gco_A 17 KNKGNEYFKKGDYPTAMRHYNEAVKR---DPE----------N---------AILYSNRAACLTKLMEFQRALDDCDTCI 74 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH---CTT----------C---------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh---CCC----------C---------HHHHHHHhhHHHhhccHHHHHHHHHHHH
Confidence 35678888999999998887644332 220 0 1244445555556667888888888877
Q ss_pred HHHHHhhhcHHHHHHHHHHH
Q psy8415 1051 DLYEKRLFDYKKLSNILQTQ 1070 (1561)
Q Consensus 1051 ~~YE~~~~Dy~kLs~i~~~~ 1070 (1561)
..-.....-|..|+.++..+
T Consensus 75 ~~~p~~~~a~~~lg~~~~~~ 94 (126)
T 4gco_A 75 RLDSKFIKGYIRKAACLVAM 94 (126)
T ss_dssp HHCTTCHHHHHHHHHHHHHT
T ss_pred HhhhhhhHHHHHHHHHHHHC
Confidence 65443323344455554443
No 116
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=23.37 E-value=2.1e+02 Score=29.61 Aligned_cols=83 Identities=10% Similarity=-0.064 Sum_probs=55.6
Q ss_pred HHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHHHHHHH
Q psy8415 972 KLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLCKELAD 1051 (1561)
Q Consensus 972 ~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~keL~~ 1051 (1561)
.++..+...|+|.+|--++....++ ++ . ....+......+.+-+.|+.|+..++..+.
T Consensus 47 ~~~~~~~~~~~~~~A~~~~~~al~~---~p----------~---------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 104 (228)
T 4i17_A 47 NCGVCADNIKKYKEAADYFDIAIKK---NY----------N---------LANAYIGKSAAYRDMKNNQEYIATLTEGIK 104 (228)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHT---TC----------S---------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcHHHHHHHHHHHHHh---Cc----------c---------hHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 3788888999999988776543321 11 0 113455566666677889999999999988
Q ss_pred HHHHhhhcHHHHHHHHHHHHHHHHH
Q psy8415 1052 LYEKRLFDYKKLSNILQTQAQFCDN 1076 (1561)
Q Consensus 1052 ~YE~~~~Dy~kLs~i~~~~a~lY~~ 1076 (1561)
.......-+..++.++..++.+|..
T Consensus 105 ~~p~~~~~~~~~~~~~~~~g~~~~~ 129 (228)
T 4i17_A 105 AVPGNATIEKLYAIYYLKEGQKFQQ 129 (228)
T ss_dssp HSTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCcHHHHHHHHHHHHHHhHHHHH
Confidence 7766544445566666666666644
No 117
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=22.98 E-value=2.4e+02 Score=29.21 Aligned_cols=87 Identities=10% Similarity=-0.007 Sum_probs=58.2
Q ss_pred ChhHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhh
Q psy8415 962 RKEMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEK 1041 (1561)
Q Consensus 962 r~emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ 1041 (1561)
..++..++.+.|+..+.+.|+|.+|--++....++ ++ + . ...+......+.+.+.|+.
T Consensus 49 ~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---~p-~---------~---------~~~~~~lg~~~~~~g~~~~ 106 (208)
T 3urz_A 49 NSEISSKLATELALAYKKNRNYDKAYLFYKELLQK---AP-N---------N---------VDCLEACAEMQVCRGQEKD 106 (208)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CT-T---------C---------HHHHHHHHHHHHHHTCHHH
T ss_pred hhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH---CC-C---------C---------HHHHHHHHHHHHHcCCHHH
Confidence 34445566678999999999999998887654433 22 1 0 1234445566666778999
Q ss_pred hHHHHHHHHHHHHHhhhcHHHHHHHHHHH
Q psy8415 1042 GIPLCKELADLYEKRLFDYKKLSNILQTQ 1070 (1561)
Q Consensus 1042 ai~l~keL~~~YE~~~~Dy~kLs~i~~~~ 1070 (1561)
|+..|+..+...-....-|..|+.++..+
T Consensus 107 A~~~~~~al~~~P~~~~a~~~lg~~~~~~ 135 (208)
T 3urz_A 107 ALRMYEKILQLEADNLAANIFLGNYYYLT 135 (208)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 99999999887655544456666666443
No 118
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=22.59 E-value=5e+02 Score=28.18 Aligned_cols=95 Identities=13% Similarity=0.132 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHH
Q psy8415 965 MYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIP 1044 (1561)
Q Consensus 965 myiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~ 1044 (1561)
.+..|.+.++..+...|+|.+|--++...-+...-.. ..+. .-..+..+...+.+-+.|+.|+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~---------------~~~~-~~~~~~~lg~~y~~~~~~~~A~~ 176 (293)
T 2qfc_A 113 QFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGI---------------DVYQ-NLYIENAIANIYAENGYLKKGID 176 (293)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSS---------------CTTH-HHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCC---------------chHH-HHHHHHHHHHHHHHcCCHHHHHH
Confidence 4567777899999999999998776643322221110 0011 22356666777777788999999
Q ss_pred HHHHHHHHHHHhhhcHHHHH-HHHHHHHHHHHH
Q psy8415 1045 LCKELADLYEKRLFDYKKLS-NILQTQAQFCDN 1076 (1561)
Q Consensus 1045 l~keL~~~YE~~~~Dy~kLs-~i~~~~a~lY~~ 1076 (1561)
.|+..+..++.. .+...+. .++..++.+|..
T Consensus 177 ~~~kal~~~~~~-~~~~~~~~~~~~nlg~~y~~ 208 (293)
T 2qfc_A 177 LFEQILKQLEAL-HDNEEFDVKVRYNHAKALYL 208 (293)
T ss_dssp HHHHHHHHHHHS-CCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-CccccchHHHHHhHHHHHHH
Confidence 999998888775 3333333 566666666644
No 119
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=22.05 E-value=1.4e+02 Score=26.28 Aligned_cols=62 Identities=13% Similarity=0.047 Sum_probs=40.6
Q ss_pred HHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHHHHHH
Q psy8415 971 YKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLCKELA 1050 (1561)
Q Consensus 971 ~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~keL~ 1050 (1561)
..++..+...|+|.+|.-++....++. + . . ...+...+..+.+.+.|+.|+..++..+
T Consensus 10 ~~~~~~~~~~~~~~~A~~~~~~a~~~~---~-~------------~------~~~~~~~a~~~~~~~~~~~A~~~~~~a~ 67 (112)
T 2kck_A 10 YLEGVLQYDAGNYTESIDLFEKAIQLD---P-E------------E------SKYWLMKGKALYNLERYEEAVDCYNYVI 67 (112)
T ss_dssp GGHHHHHHSSCCHHHHHHHHHHHHHHC---C-C------------C------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhC---c-C------------C------HHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 456778888999999888776544432 1 0 0 1234445555666677999999988887
Q ss_pred HHHH
Q psy8415 1051 DLYE 1054 (1561)
Q Consensus 1051 ~~YE 1054 (1561)
....
T Consensus 68 ~~~~ 71 (112)
T 2kck_A 68 NVIE 71 (112)
T ss_dssp HTSC
T ss_pred HhCc
Confidence 6543
No 120
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=22.01 E-value=3.7e+02 Score=24.73 Aligned_cols=64 Identities=9% Similarity=-0.107 Sum_probs=44.6
Q ss_pred HHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHHH
Q psy8415 968 RYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLCK 1047 (1561)
Q Consensus 968 ryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~k 1047 (1561)
...+.++..+...|+|.+|--++....++ ++ .. ...+......+.+-+.|+.|+..++
T Consensus 39 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~---~p----------~~---------~~~~~~lg~~~~~~~~~~~A~~~~~ 96 (126)
T 3upv_A 39 RGYSNRAAALAKLMSFPEAIADCNKAIEK---DP----------NF---------VRAYIRKATAQIAVKEYASALETLD 96 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CT----------TC---------HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh---CC----------Cc---------HHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 45567888899999999998877654443 22 10 1234445555666678999999999
Q ss_pred HHHHHH
Q psy8415 1048 ELADLY 1053 (1561)
Q Consensus 1048 eL~~~Y 1053 (1561)
..+...
T Consensus 97 ~al~~~ 102 (126)
T 3upv_A 97 AARTKD 102 (126)
T ss_dssp HHHHHH
T ss_pred HHHHhC
Confidence 988766
No 121
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=21.72 E-value=2.4e+02 Score=29.02 Aligned_cols=65 Identities=8% Similarity=-0.037 Sum_probs=35.9
Q ss_pred HHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHHHHH
Q psy8415 968 RYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIPLCK 1047 (1561)
Q Consensus 968 ryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~l~k 1047 (1561)
.....++..+...|+|.+|--++....++. + + . ...+...+..+.+.+.|+.|+..++
T Consensus 140 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~---~-~---------~---------~~~~~~l~~~~~~~~~~~~A~~~~~ 197 (258)
T 3uq3_A 140 EEARLEGKEYFTKSDWPNAVKAYTEMIKRA---P-E---------D---------ARGYSNRAAALAKLMSFPEAIADCN 197 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---T-T---------C---------HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcC---c-c---------c---------HHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 444567777777788877776665443321 1 0 0 1233444455555556666666666
Q ss_pred HHHHHHH
Q psy8415 1048 ELADLYE 1054 (1561)
Q Consensus 1048 eL~~~YE 1054 (1561)
..+....
T Consensus 198 ~al~~~~ 204 (258)
T 3uq3_A 198 KAIEKDP 204 (258)
T ss_dssp HHHHHCT
T ss_pred HHHHhCH
Confidence 6655443
No 122
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=21.60 E-value=3e+02 Score=28.59 Aligned_cols=79 Identities=16% Similarity=0.132 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhH
Q psy8415 964 EMYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGI 1043 (1561)
Q Consensus 964 emyiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai 1043 (1561)
....+....|+..+...|+|.+|--++....++..-.. . ... ......+......+...+.|+.|+
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~-~-------~~~------~~~~~~~~~l~~~~~~~g~~~~A~ 105 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTL-G-------KDH------PAVAATLNNLAVLYGKRGKYKEAE 105 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT-C-------TTC------HHHHHHHHHHHHHHHTTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHc-C-------Ccc------hHHHHHHHHHHHHHHHhccHHHHH
Confidence 34556677888999999999999888765444432110 0 000 111235566667777777888888
Q ss_pred HHHHHHHHHHHHh
Q psy8415 1044 PLCKELADLYEKR 1056 (1561)
Q Consensus 1044 ~l~keL~~~YE~~ 1056 (1561)
..|+..+..++..
T Consensus 106 ~~~~~al~~~~~~ 118 (283)
T 3edt_B 106 PLCKRALEIREKV 118 (283)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888888887553
No 123
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=21.41 E-value=1.4e+02 Score=31.25 Aligned_cols=35 Identities=11% Similarity=-0.105 Sum_probs=23.1
Q ss_pred hcCChhHHHHHHHHHHHHHccCCChHHHHHHHHHH
Q psy8415 959 EINRKEMYLRYIYKLHDLHRPADNFTEAGFTLKLY 993 (1561)
Q Consensus 959 ~~~r~emyiryv~~La~lH~~~~Ny~EAAl~L~lh 993 (1561)
...+|+-.....+.++..+...|+|.+|--++...
T Consensus 29 ~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 63 (252)
T 2ho1_A 29 TDKGRDEARDAYIQLGLGYLQRGNTEQAKVPLRKA 63 (252)
T ss_dssp --CCHHHHHHHHHHHHHHHHHTTCTGGGHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 34566666677777777777778877777666543
No 124
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=21.22 E-value=3e+02 Score=29.13 Aligned_cols=68 Identities=15% Similarity=0.275 Sum_probs=47.6
Q ss_pred HHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcc---------cchh
Q psy8415 970 IYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKG---------KCWE 1040 (1561)
Q Consensus 970 v~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg---------~~wE 1040 (1561)
.+.++..+.+.|+|.+|.-++....+...-+. ...+.++..+.-++..| +.|+
T Consensus 151 ~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~------------------~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~ 212 (261)
T 3qky_A 151 QYEAARLYERRELYEAAAVTYEAVFDAYPDTP------------------WADDALVGAMRAYIAYAEQSVRARQPERYR 212 (261)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST------------------THHHHHHHHHHHHHHHHHTSCGGGHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHCCCCc------------------hHHHHHHHHHHHHHHhcccchhhcccchHH
Confidence 57789999999999999998876555432110 12235555555555443 7899
Q ss_pred hhHHHHHHHHHHHHH
Q psy8415 1041 KGIPLCKELADLYEK 1055 (1561)
Q Consensus 1041 ~ai~l~keL~~~YE~ 1055 (1561)
.|+..|+.++..|-.
T Consensus 213 ~A~~~~~~~~~~~p~ 227 (261)
T 3qky_A 213 RAVELYERLLQIFPD 227 (261)
T ss_dssp HHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHCCC
Confidence 999999999987654
No 125
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=20.70 E-value=98 Score=40.44 Aligned_cols=63 Identities=17% Similarity=0.334 Sum_probs=42.2
Q ss_pred eEEEE-EEEec-CCCccce-eEEE-eeccccccCcEEEEEEeeccccccccCCcceEEEEeeccCCCCceecCCceEEEE
Q psy8415 237 EYHSM-IIYHH-NSPCWSE-IIRL-AVPIERYQSSHIRLEYRHCSTRDKADNKKLLGFSFARLMEPSGATLQDCQHELFI 312 (1561)
Q Consensus 237 ~~~S~-V~yHn-~~P~w~E-eIKi-~LP~~~~~~~HLlFtFrH~S~~~k~~~~~pfg~a~lPL~~~~g~~l~DG~h~L~V 312 (1561)
.++|- |...| -+|.|+| ++.. .++.... +.|+|+.+.-. + ..+|.+-+||-. |+.|...+++
T Consensus 713 k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el--~~Lr~~V~D~d-----~--d~iG~~~ipl~~-----L~~G~r~v~L 778 (799)
T 2zkm_X 713 RYRTKLSPSTNSINPVWKEEPFVFEKILMPEL--ASLRVAVMEEG-----N--KFLGHRIIPINA-----LNSGYHHLCL 778 (799)
T ss_dssp CEECCCCSSSCCSSCBCCCCCEEEEEESSGGG--CEEEEEEEETT-----T--EEEEEEEEEGGG-----BCCEEEEEEE
T ss_pred ceeecccccCCCCCCeeecceEEEEEEccCCc--cEEEEEEEEeC-----C--CccceEeeehhh-----cCCCcEEEec
Confidence 57887 66655 5999999 5887 6654333 47999876431 3 677888888754 4556666666
Q ss_pred E
Q psy8415 313 Y 313 (1561)
Q Consensus 313 y 313 (1561)
+
T Consensus 779 ~ 779 (799)
T 2zkm_X 779 H 779 (799)
T ss_dssp E
T ss_pred c
Confidence 4
No 126
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=20.00 E-value=3.7e+02 Score=26.15 Aligned_cols=88 Identities=8% Similarity=-0.077 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHccCCChHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCCCchhhhHHHHHHHHHHHHHcccchhhhHH
Q psy8415 965 MYLRYIYKLHDLHRPADNFTEAGFTLKLYADSLSWTSSAPLINDPMCQPNGAPEWYRKEQLYYEIISYFDKGKCWEKGIP 1044 (1561)
Q Consensus 965 myiryv~~La~lH~~~~Ny~EAAl~L~lhA~ll~W~~~~~l~~~~~~~~p~qt~~erKE~L~~~~i~~f~kg~~wE~ai~ 1044 (1561)
........|+..+.+.|+|.+|--++...-++ ++ + . -..++.. ...+..-+.|+.|+.
T Consensus 61 ~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~---~p-~---------~--------~~a~~~~-g~~~~~~g~~~~A~~ 118 (162)
T 3rkv_A 61 KNIPLYANMSQCYLNIGDLHEAEETSSEVLKR---EE-T---------N--------EKALFRR-AKARIAAWKLDEAEE 118 (162)
T ss_dssp THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH---ST-T---------C--------HHHHHHH-HHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhc---CC-c---------c--------hHHHHHH-HHHHHHHhcHHHHHH
Confidence 34556678899999999999998776544333 33 1 0 0234444 444555578999999
Q ss_pred HHHHHHHHHHHhhhcHHHHHHHHHHHHHHHHHHhhc
Q psy8415 1045 LCKELADLYEKRLFDYKKLSNILQTQAQFCDNILNQ 1080 (1561)
Q Consensus 1045 l~keL~~~YE~~~~Dy~kLs~i~~~~a~lY~~I~~~ 1080 (1561)
.|+..+...-.. -..+...++.+...+...
T Consensus 119 ~~~~al~l~p~~------~~~~~~~l~~~~~~~~~~ 148 (162)
T 3rkv_A 119 DLKLLLRNHPAA------ASVVAREMKIVTERRAEK 148 (162)
T ss_dssp HHHHHHHHCGGG------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCC------HHHHHHHHHHHHHHHHHH
Confidence 999888764443 113444555555555544
Done!