Query psy8417
Match_columns 326
No_of_seqs 119 out of 162
Neff 4.0
Searched_HMMs 29240
Date Fri Aug 16 18:20:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8417.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8417hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fv2_A RCD1 required for cell 100.0 5E-128 2E-132 901.5 23.4 267 43-309 1-267 (268)
2 4hxt_A De novo protein OR329; 97.8 0.0019 6.6E-08 54.2 16.8 233 49-313 6-244 (252)
3 4db8_A Armadillo-repeat protei 97.5 0.005 1.7E-07 52.4 16.2 222 55-309 24-250 (252)
4 4db6_A Armadillo repeat protei 97.5 0.0018 6.3E-08 53.8 12.8 186 55-267 24-210 (210)
5 4db6_A Armadillo repeat protei 97.4 0.0078 2.7E-07 49.9 15.1 173 116-309 30-208 (210)
6 1xqr_A HSPBP1 protein; armadil 97.3 0.013 4.5E-07 54.4 17.2 239 43-310 26-287 (296)
7 4hxt_A De novo protein OR329; 97.2 0.013 4.6E-07 49.0 14.4 174 116-310 20-199 (252)
8 4db8_A Armadillo-repeat protei 97.1 0.018 6.2E-07 48.9 15.2 168 123-310 38-209 (252)
9 4b8j_A Importin subunit alpha- 96.7 0.056 1.9E-06 51.5 16.3 198 45-270 74-277 (528)
10 2z6h_A Catenin beta-1, beta-ca 96.2 0.27 9.2E-06 48.7 18.0 195 56-276 27-222 (644)
11 4b8j_A Importin subunit alpha- 96.1 0.19 6.4E-06 47.9 15.9 219 56-309 216-442 (528)
12 2jdq_A Importin alpha-1 subuni 96.1 0.28 9.7E-06 44.7 16.4 223 55-310 32-263 (450)
13 1wa5_B Importin alpha subunit; 95.6 0.81 2.8E-05 43.8 17.9 175 116-309 275-456 (530)
14 1jdh_A Beta-catenin; beta-cate 95.4 1 3.5E-05 42.0 17.7 194 56-275 30-224 (529)
15 1wa5_B Importin alpha subunit; 95.3 2.1 7.1E-05 40.9 20.7 229 47-309 89-327 (530)
16 1jdh_A Beta-catenin; beta-cate 94.8 2.6 9E-05 39.3 19.6 231 56-308 279-528 (529)
17 2jdq_A Importin alpha-1 subuni 93.2 4.7 0.00016 36.5 18.1 218 57-309 164-389 (450)
18 3nmw_A APC variant protein; AR 93.2 0.97 3.3E-05 42.7 12.3 161 107-275 41-210 (354)
19 3ul1_B Importin subunit alpha- 92.9 3 0.0001 40.3 15.4 222 56-309 245-477 (510)
20 2z6h_A Catenin beta-1, beta-ca 92.8 3.6 0.00012 40.7 16.2 142 116-268 371-529 (644)
21 3tpo_A Importin subunit alpha- 92.6 4 0.00014 39.4 15.9 220 56-308 264-495 (529)
22 2z6g_A B-catenin; FULL-length, 92.2 3.1 0.00011 42.8 15.4 143 56-216 163-305 (780)
23 1xm9_A Plakophilin 1; armadill 91.3 1.6 5.6E-05 41.7 11.4 148 115-277 19-183 (457)
24 3nmz_A APC variant protein; pr 91.2 1.2 4.1E-05 43.9 10.7 155 113-275 163-326 (458)
25 1xqr_A HSPBP1 protein; armadil 89.3 4.5 0.00015 37.3 12.2 144 56-217 95-239 (296)
26 2z6g_A B-catenin; FULL-length, 88.4 9.9 0.00034 39.1 15.2 142 116-268 507-665 (780)
27 3nmw_A APC variant protein; AR 88.2 3 0.0001 39.4 10.4 144 56-217 184-335 (354)
28 1ibr_B P95, importin beta-1 su 87.0 17 0.00058 32.8 15.0 216 47-310 3-246 (462)
29 1xm9_A Plakophilin 1; armadill 87.0 4.3 0.00015 38.8 10.8 158 47-218 288-451 (457)
30 4fdd_A Transportin-1; heat rep 85.6 9.8 0.00034 38.6 13.2 228 41-309 9-243 (852)
31 3ul1_B Importin subunit alpha- 85.4 26 0.00088 33.7 15.5 172 115-308 249-428 (510)
32 3tt9_A Plakophilin-2; cell adh 82.9 7.7 0.00027 34.9 10.0 150 113-277 25-192 (233)
33 3tpo_A Importin subunit alpha- 81.8 38 0.0013 32.5 16.4 171 116-308 269-447 (529)
34 1w63_A Adapter-related protein 81.3 45 0.0015 33.1 16.8 140 47-218 109-265 (618)
35 3nmz_A APC variant protein; pr 80.0 7 0.00024 38.4 9.2 100 117-223 353-456 (458)
36 1b3u_A Protein (protein phosph 79.3 21 0.00071 33.4 11.8 160 44-216 9-193 (588)
37 3now_A UNC-45 protein, SD10334 76.1 57 0.002 34.7 15.3 225 56-310 392-652 (810)
38 3now_A UNC-45 protein, SD10334 75.9 17 0.00059 38.6 11.3 146 115-275 598-747 (810)
39 4gmo_A Putative uncharacterize 75.9 25 0.00086 35.6 12.2 148 122-277 58-226 (684)
40 3l6x_A Catenin delta-1; cateni 74.7 42 0.0014 34.2 13.5 152 115-277 65-233 (584)
41 1qgr_A Protein (importin beta 72.9 76 0.0026 31.4 14.5 180 47-266 3-203 (876)
42 4fdd_A Transportin-1; heat rep 72.7 52 0.0018 33.3 13.6 106 156-273 186-292 (852)
43 2vgl_A Adaptor protein complex 67.7 1E+02 0.0036 30.8 16.6 135 47-184 113-281 (621)
44 1ibr_B P95, importin beta-1 su 65.7 7.7 0.00026 35.1 5.2 229 56-309 50-287 (462)
45 2bpt_A Importin beta-1 subunit 65.7 90 0.0031 30.8 13.2 135 158-309 109-252 (861)
46 1wa5_C Importin alpha RE-expor 56.5 1.5E+02 0.0051 30.8 13.5 140 43-216 3-152 (960)
47 3opb_A SWI5-dependent HO expre 53.3 44 0.0015 35.6 9.0 147 59-214 517-681 (778)
48 2vgl_B AP-2 complex subunit be 51.7 90 0.0031 30.6 10.5 58 126-184 293-359 (591)
49 4gmo_A Putative uncharacterize 50.7 39 0.0013 34.2 7.9 161 58-222 91-264 (684)
50 1u6g_C TIP120 protein, CAND1; 44.5 68 0.0023 33.9 8.8 70 144-215 134-203 (1230)
51 3opb_A SWI5-dependent HO expre 42.0 2.2E+02 0.0074 30.4 12.1 163 45-226 295-496 (778)
52 3dev_A SH1221; alpha-beta prot 41.2 48 0.0016 31.0 6.4 54 186-239 127-180 (320)
53 1qgr_A Protein (importin beta 40.7 14 0.00048 36.6 2.7 69 146-215 799-870 (876)
54 3grl_A General vesicular trans 40.0 3.5E+02 0.012 28.3 13.7 184 113-303 227-441 (651)
55 3tt9_A Plakophilin-2; cell adh 36.7 1.9E+02 0.0064 25.7 9.3 144 159-311 25-181 (233)
56 1b3u_A Protein (protein phosph 36.1 2.7E+02 0.0091 25.8 12.2 129 157-309 454-586 (588)
57 2bpt_A Importin beta-1 subunit 32.2 3.7E+02 0.013 26.3 11.5 60 157-216 194-253 (861)
58 3l6x_A Catenin delta-1; cateni 27.4 2.6E+02 0.0089 28.4 9.6 143 159-310 63-221 (584)
59 2qk2_A LP04448P; mini spindles 26.5 2.8E+02 0.0097 23.1 11.8 208 55-310 27-236 (242)
60 3bwt_A Protein PUF4; pumilio, 26.4 84 0.0029 28.5 5.3 24 253-276 152-175 (333)
61 2qk2_A LP04448P; mini spindles 25.7 2.9E+02 0.01 23.0 10.4 89 158-263 71-159 (242)
62 1wa5_C Importin alpha RE-expor 23.8 6.1E+02 0.021 26.1 12.4 98 113-215 307-433 (960)
63 1u6g_C TIP120 protein, CAND1; 22.8 6.9E+02 0.023 26.3 13.1 41 156-198 267-307 (1230)
No 1
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.2e-128 Score=901.48 Aligned_cols=267 Identities=88% Similarity=1.329 Sum_probs=264.7
Q ss_pred hHHHHHHHHHHhCCcchHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHH
Q psy8417 43 EREKIYQWILELSIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALL 122 (326)
Q Consensus 43 d~~~v~q~I~~L~~p~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLL 122 (326)
|+|+++|||.||++|++||+||+|||||||++|||||+||||||||++|||||+|+||+++||+||+++|||||||||||
T Consensus 1 ~~~~i~qli~~L~~p~~Re~AL~eLsk~Re~~~~La~~LW~S~Gtia~LLQEIisiYp~lspp~Lt~~~SnRVcnaLaLl 80 (268)
T 2fv2_A 1 DREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALL 80 (268)
T ss_dssp -CHHHHHHHHHTSSTTTHHHHHHHHHHHTTTCTTHHHHHHHSTTHHHHHHHHHHHTGGGBTTBCCCHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHhcCchhHHHHHHHHHHhhhccccHHHHHHhccCHHHHHHHHHHHHcccCCCcccCHHHHhHHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhchhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccch
Q psy8417 123 QCVASHQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSEL 202 (326)
Q Consensus 123 QcvAshpetR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsEl 202 (326)
||||||||||++||+||||+||||||||++|+|||||||||||||||||||+||+|||+|||+|||||+|||+||+|||+
T Consensus 81 QcvAshpetr~~Fl~a~iplyLyPfL~t~sk~r~fE~LRLtsLGVIgaLvK~dd~eVi~fLL~tEiiplCLrime~Gsel 160 (268)
T 2fv2_A 81 QCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSEL 160 (268)
T ss_dssp HHHHHCTTTHHHHHHTTGGGGTHHHHHCCCCSHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHTTHHHHHHHHHHHSCHH
T ss_pred HHHHcCcchhhHHHHccchHHhhhhhccccCCCcchhhhhhHHHHHHHHhccCcHHHHHHHHhhhHHHHHHHHHhhccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhcccccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhcCHHHHHHHHhhCCccc
Q psy8417 203 SKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQCLPDQL 282 (326)
Q Consensus 203 SKtvAtfIlqKIL~dd~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsdn~rar~aL~~~LP~~L 282 (326)
||||||||+||||+||+||+|+|+|+|||+||++||++||.++.++||+||||||||||+|||||||||++|++|||++|
T Consensus 161 SKtvAtfIlqKIL~dd~GL~YiC~t~eRF~av~~vL~~mV~~l~~~ps~RLLKhiircYlRLsdn~rar~aL~~~LP~~L 240 (268)
T 2fv2_A 161 SKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQL 240 (268)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHHTSSHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTSHHHHHHHHHHSCGGG
T ss_pred HHHHHHHHHHHHhccchhHHHHHccHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhcCHHHHHHHHHhCcHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhhhcCCHHHHHHHHHHHHHhc
Q psy8417 283 RDSTFSVCLNDDKSTKNWLAQLIKNLE 309 (326)
Q Consensus 283 rd~tf~~~l~~D~~~k~wl~qLl~nl~ 309 (326)
||++|++++++|+++|+|++||+.|++
T Consensus 241 rd~tf~~~l~~D~~~k~~l~qLl~n~~ 267 (268)
T 2fv2_A 241 KDTTFAQVLKDDTTTKRWLAQLVKNLQ 267 (268)
T ss_dssp TSSTTHHHHTSCHHHHHHHHHHHHHSC
T ss_pred hChHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999985
No 2
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=97.76 E-value=0.0019 Score=54.19 Aligned_cols=233 Identities=15% Similarity=0.118 Sum_probs=156.0
Q ss_pred HHHHHhC--CcchHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHHhh
Q psy8417 49 QWILELS--IPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVA 126 (326)
Q Consensus 49 q~I~~L~--~p~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQcvA 126 (326)
.++.-|. +++.|..|+..|..--...++....+- ..|.+..|++=+-+ ++ ..-..+++..|..++
T Consensus 6 ~L~~~L~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~-~~g~i~~L~~ll~~-------~~-----~~v~~~a~~~L~~l~ 72 (252)
T 4hxt_A 6 KLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIV-DAGGVEVLVKLLTS-------TD-----SEVQKEAARALANIA 72 (252)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHH-HTTHHHHHHHHTTC-------SC-----HHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHH-HCCCHHHHHHHHhC-------CC-----HHHHHHHHHHHHHHH
Confidence 3444444 456678888777665443333333332 23666666654322 21 222346666677788
Q ss_pred hc-hhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhH
Q psy8417 127 SH-QETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKT 205 (326)
Q Consensus 127 sh-petR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKt 205 (326)
.+ ++.|..+++....-.|..+|+. +.+.+|-..+++++.|... +++....+.....+|..++.++.+++-.+.
T Consensus 73 ~~~~~~~~~~~~~~~i~~l~~ll~~-----~~~~v~~~a~~~L~~l~~~-~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~ 146 (252)
T 4hxt_A 73 SGPDEAIKAIVDAGGVEVLVKLLTS-----TDSEVQKEAARALANIASG-PDEAIKAIVDAGGVEVLVKLLTSTDSEVQK 146 (252)
T ss_dssp TSCHHHHHHHHHTTHHHHHHHHTTC-----SSHHHHHHHHHHHHHHTTS-CHHHHHHHHHTTHHHHHHHHTTCSCHHHHH
T ss_pred cCChHHHHHHHHCCCHHHHHHHHcC-----CCHHHHHHHHHHHHHHHcC-CHHHHHHHHHCCCHHHHHHHHcCCCHHHHH
Confidence 77 9999999999887777777773 3478999999999999973 456677788889999999999999988999
Q ss_pred HHHHHHHHHhcccccc-hhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhc-CHHHHHHHHhhCCcccc
Q psy8417 206 VATFILQKILLDDSGL-SYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSD-NARAREALRQCLPDQLR 283 (326)
Q Consensus 206 vAtfIlqKIL~dd~GL-~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsd-n~rar~aL~~~LP~~Lr 283 (326)
-|...+..+..++.+. ..+.. ..++..++. +..++++.+-+...++-..|+. ++..+..+.+. ..-
T Consensus 147 ~a~~~L~~l~~~~~~~~~~~~~--------~~~i~~L~~-ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~---~~i 214 (252)
T 4hxt_A 147 EAARALANIASGPDEAIKAIVD--------AGGVEVLVK-LLTSTDSEVQKEAARALANIASGPTSAIKAIVDA---GGV 214 (252)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHH--------TTHHHHHHH-HTTCSCHHHHHHHHHHHHHHTTSBHHHHHHHHHT---THH
T ss_pred HHHHHHHHHHcCCHHHHHHHHH--------CcCHHHHHH-HHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHC---CCH
Confidence 9999999887654332 11111 123333333 4457889999999999999997 77777666541 111
Q ss_pred cchhhhhh-cCCHHHHHHHHHHHHHhcccCc
Q psy8417 284 DSTFSVCL-NDDKSTKNWLAQLIKNLESVSA 313 (326)
Q Consensus 284 d~tf~~~l-~~D~~~k~wl~qLl~nl~~~~~ 313 (326)
..+..++ .+|+.+++.-...+.|+.....
T Consensus 215 -~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~ 244 (252)
T 4hxt_A 215 -EVLQKLLTSTDSEVQKEAQRALENIKSGGW 244 (252)
T ss_dssp -HHHHHGGGCSCHHHHHHHHHHHHHHHHTCB
T ss_pred -HHHHHHHCCCcHHHHHHHHHHHHHHHcCCC
Confidence 1122233 4588899999999999976443
No 3
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=97.53 E-value=0.005 Score=52.42 Aligned_cols=222 Identities=15% Similarity=0.181 Sum_probs=147.2
Q ss_pred CCcchHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHHhhh-chhhHH
Q psy8417 55 SIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVAS-HQETRS 133 (326)
Q Consensus 55 ~~p~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQcvAs-hpetR~ 133 (326)
.+++.|..|...|.+.-...++-...+. ..|.+..|++=+- .++ ..-...++..|..++. +++.+.
T Consensus 24 ~~~~~~~~a~~~L~~~l~~~~~~~~~~~-~~g~i~~L~~lL~-------~~~-----~~v~~~a~~~L~~l~~~~~~~~~ 90 (252)
T 4db8_A 24 DDMQEQLSATRKFSQILSDGNEQIQAVI-DAGALPALVQLLS-------SPN-----EQILQEALWALSNIASGGNEQIQ 90 (252)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHHHHHHHH-HTTHHHHHHHGGG-------CSC-----HHHHHHHHHHHHHHTTSCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCchHHHHH-HcCcHHHHHHHHc-------CCC-----HHHHHHHHHHHHHHhcCCHHHHH
Confidence 4778899998888653322111112222 3366666654332 221 2233466777778886 789999
Q ss_pred HHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHHHHHHH
Q psy8417 134 LFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQK 213 (326)
Q Consensus 134 ~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqK 213 (326)
.++++...-.|..+|+. +.+.+|-.++++++.|...++ ..+..+.....+|..++.++.++.-.+.-|...+..
T Consensus 91 ~i~~~g~i~~L~~lL~~-----~~~~v~~~a~~~L~~l~~~~~-~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~ 164 (252)
T 4db8_A 91 AVIDAGALPALVQLLSS-----PNEQILQEALWALSNIASGGN-EQIQAVIDAGALPALVQLLSSPNEQILQEALWALSN 164 (252)
T ss_dssp HHHHTTHHHHHHHGGGC-----SCHHHHHHHHHHHHHHTTSCH-HHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHcC-----CCHHHHHHHHHHHHHhhcCCc-hHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999877777778765 347889999999999987554 334677888999999999999998889999999998
Q ss_pred Hhccccc-chhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhh-cCHHHHHHHHhh-CCcccccchhhhh
Q psy8417 214 ILLDDSG-LSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLS-DNARAREALRQC-LPDQLRDSTFSVC 290 (326)
Q Consensus 214 IL~dd~G-L~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLs-dn~rar~aL~~~-LP~~Lrd~tf~~~ 290 (326)
+..++.. ...+.. ..++..++ .+..++++.+.++..++-..|+ .++..+..+.+. .-+ .+..+
T Consensus 165 l~~~~~~~~~~~~~--------~~~i~~L~-~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~-----~L~~l 230 (252)
T 4db8_A 165 IASGGNEQIQAVID--------AGALPALV-QLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALE-----KLEQL 230 (252)
T ss_dssp HTTSCHHHHHHHHH--------TTCHHHHH-HGGGCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHH-----HHHTT
T ss_pred HHcCChHHHHHHHH--------CCCHHHHH-HHHCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHH-----HHHHH
Confidence 8765421 111110 12333333 3456779999999999999998 567767666542 111 11122
Q ss_pred h-cCCHHHHHHHHHHHHHhc
Q psy8417 291 L-NDDKSTKNWLAQLIKNLE 309 (326)
Q Consensus 291 l-~~D~~~k~wl~qLl~nl~ 309 (326)
+ .+|+.+++.-...+.|+.
T Consensus 231 l~~~~~~v~~~A~~~L~~l~ 250 (252)
T 4db8_A 231 QSHENEKIQKEAQEALEKLQ 250 (252)
T ss_dssp TTCSSSHHHHTHHHHHHTTC
T ss_pred hCCCCHHHHHHHHHHHHHHh
Confidence 2 347788887777777764
No 4
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=97.50 E-value=0.0018 Score=53.78 Aligned_cols=186 Identities=17% Similarity=0.180 Sum_probs=126.1
Q ss_pred CCcchHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHHhh-hchhhHH
Q psy8417 55 SIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVA-SHQETRS 133 (326)
Q Consensus 55 ~~p~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQcvA-shpetR~ 133 (326)
.+++.|++|+..|+.--...++....+... |.+..|++=+- .+ +. .-...++..|..++ .+++.+.
T Consensus 24 ~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~-g~i~~L~~lL~-------~~--~~---~v~~~a~~~L~~l~~~~~~~~~ 90 (210)
T 4db6_A 24 PDQQELQSALRKLSQIASGGNEQIQAVIDA-GALPALVQLLS-------SP--NE---QILQEALWALSNIASGGNEQIQ 90 (210)
T ss_dssp SCHHHHHHHHHHHHHHHTSCHHHHHHHHHT-THHHHHHHHTT-------CS--CH---HHHHHHHHHHHHHTTSCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCHHHHHHHHHc-CCHHHHHHHHc-------CC--CH---HHHHHHHHHHHHHhcCCcHHHH
Confidence 467778888888876654434444444443 56666554332 11 11 12235666677777 5778999
Q ss_pred HHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHHHHHHH
Q psy8417 134 LFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQK 213 (326)
Q Consensus 134 ~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqK 213 (326)
.++++...-.|..+|+.. -+.+|-...++++.+.. ++++....+.+...+|..++.++.+++-.+..|...+..
T Consensus 91 ~i~~~g~i~~L~~lL~~~-----~~~v~~~a~~~L~~l~~-~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~ 164 (210)
T 4db6_A 91 AVIDAGALPALVQLLSSP-----NEQILQEALWALSNIAS-GGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSN 164 (210)
T ss_dssp HHHHTTCHHHHHHHTTCS-----CHHHHHHHHHHHHHHTT-SCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHcCC-----cHHHHHHHHHHHHHHHc-CCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 999998887888888654 36789999999999987 445666677899999999999999999899999999988
Q ss_pred HhcccccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhcC
Q psy8417 214 ILLDDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDN 267 (326)
Q Consensus 214 IL~dd~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsdn 267 (326)
+..+..... +.+.. ..++..+ .++..++++++-++...+--+|+++
T Consensus 165 l~~~~~~~~------~~~~~-~g~i~~L-~~ll~~~~~~v~~~a~~aL~~l~~~ 210 (210)
T 4db6_A 165 IASGGNEQK------QAVKE-AGALEKL-EQLQSHENEKIQKEAQEALEKLQSH 210 (210)
T ss_dssp HHTSCHHHH------HHHHH-TTHHHHH-HHGGGCSCHHHHHHHHHHHHHHCC-
T ss_pred HHcCCcHHH------HHHHH-CCCHHHH-HHHHhCCCHHHHHHHHHHHHHHhcC
Confidence 876532211 01111 1133333 3355678888888888888887764
No 5
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=97.36 E-value=0.0078 Score=49.93 Aligned_cols=173 Identities=15% Similarity=0.201 Sum_probs=125.7
Q ss_pred HHHHHHHHHhh-hchhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhh
Q psy8417 116 CNALALLQCVA-SHQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLR 194 (326)
Q Consensus 116 CnaLaLLQcvA-shpetR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLr 194 (326)
.+|+..|..++ .+++.+..++++...-.|..+|+.. .+.+|-..+.++|.+... +++....+.+...+|..++
T Consensus 30 ~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~-----~~~v~~~a~~~L~~l~~~-~~~~~~~i~~~g~i~~L~~ 103 (210)
T 4db6_A 30 QSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSP-----NEQILQEALWALSNIASG-GNEQIQAVIDAGALPALVQ 103 (210)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS-----CHHHHHHHHHHHHHHTTS-CHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCC-----CHHHHHHHHHHHHHHhcC-CcHHHHHHHHCCCHHHHHH
Confidence 36666777778 6789999999998887888888743 467899999999999864 3455667788999999999
Q ss_pred hhccccchhhHHHHHHHHHHhcccccchhhhcchhhhHHH--HHHHHHHHHHHhhcCCchhHHHHHHHHHHhhcC-HHHH
Q psy8417 195 IMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHV--AMILGKMVISLEKDQSSRLLKHVVRCYLRLSDN-ARAR 271 (326)
Q Consensus 195 iME~GsElSKtvAtfIlqKIL~dd~GL~YiC~T~eRF~aV--~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsdn-~rar 271 (326)
.++.++.-.+.-|...+..+..++.. ....+ ..++..++. +.+++++.+-++..++-..|+.+ +..+
T Consensus 104 lL~~~~~~v~~~a~~~L~~l~~~~~~---------~~~~~~~~~~i~~L~~-ll~~~~~~v~~~a~~aL~~l~~~~~~~~ 173 (210)
T 4db6_A 104 LLSSPNEQILQEALWALSNIASGGNE---------QIQAVIDAGALPALVQ-LLSSPNEQILQEALWALSNIASGGNEQK 173 (210)
T ss_dssp HTTCSCHHHHHHHHHHHHHHTTSCHH---------HHHHHHHTTHHHHHHH-HTTCSCHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHcCCcHHHHHHHHHHHHHHHcCCHH---------HHHHHHHcCcHHHHHH-HHcCCCHHHHHHHHHHHHHHHcCCcHHH
Confidence 99999999999999999988754432 11111 123444443 44567999999999999999987 7777
Q ss_pred HHHHhh-CCcccccchhhhhh-cCCHHHHHHHHHHHHHhc
Q psy8417 272 EALRQC-LPDQLRDSTFSVCL-NDDKSTKNWLAQLIKNLE 309 (326)
Q Consensus 272 ~aL~~~-LP~~Lrd~tf~~~l-~~D~~~k~wl~qLl~nl~ 309 (326)
..+... .-+. +..++ .+|+.+++.-...+.|+.
T Consensus 174 ~~~~~~g~i~~-----L~~ll~~~~~~v~~~a~~aL~~l~ 208 (210)
T 4db6_A 174 QAVKEAGALEK-----LEQLQSHENEKIQKEAQEALEKLQ 208 (210)
T ss_dssp HHHHHTTHHHH-----HHHGGGCSCHHHHHHHHHHHHHHC
T ss_pred HHHHHCCCHHH-----HHHHHhCCCHHHHHHHHHHHHHHh
Confidence 666542 1111 11222 358889988888888875
No 6
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=97.29 E-value=0.013 Score=54.36 Aligned_cols=239 Identities=19% Similarity=0.238 Sum_probs=157.6
Q ss_pred hHHHHHHHHHHhCCc--------------chHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCC
Q psy8417 43 EREKIYQWILELSIP--------------ETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLT 108 (326)
Q Consensus 43 d~~~v~q~I~~L~~p--------------~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt 108 (326)
+.+.|-..+.-|.+| +.|+.|+..|+..-+..+ -|..+ ...|.+..|++ ..|..++
T Consensus 26 ~~~~mk~~l~vl~~~~~~~~~~~~~~~~~e~k~~Al~~L~~lv~~~d-na~~~-~~~G~l~~Lv~------~lL~s~~-- 95 (296)
T 1xqr_A 26 EVEQMKSCLRVLSQPMPPTAGEAEQAADQQEREGALELLADLCENMD-NAADF-CQLSGMHLLVG------RYLEAGA-- 95 (296)
T ss_dssp HHHHHHHHHHHHHSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHTSHH-HHHHH-HHTTHHHHHHH------TTTTCSS--
T ss_pred HHHHHHHHHHHHhCCCcccccccccCCCHHHHHHHHHHHHHHHhChh-hHHHH-HHcCCHHHHHH------HHHcCCC--
Confidence 344555555555565 578999999998877653 55554 67788877766 3444331
Q ss_pred hhhhhhHHHHHHHHHHhh-hchhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhc
Q psy8417 109 AHQSNRVCNALALLQCVA-SHQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTE 187 (326)
Q Consensus 109 ~~~SnRVCnaLaLLQcvA-shpetR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TE 187 (326)
...| ..|...|-.+| .+|+.|..++++...-.|...|+... -+.+|-..+..++.+++.+.+ ...-+....
T Consensus 96 --~~vr-~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~----~~~v~~~A~~ALsnl~~~~~~-~~~~~~~~g 167 (296)
T 1xqr_A 96 --AGLR-WRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDA----CDTVRVKALFAISCLVREQEA-GLLQFLRLD 167 (296)
T ss_dssp --HHHH-HHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCS----CHHHHHHHHHHHHHHHTTCHH-HHHHHHHTT
T ss_pred --HHHH-HHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCC----CHHHHHHHHHHHHHHHcCCcH-HHHHHHHCC
Confidence 2222 24444444555 56889999999988888888887432 256788899999999986554 444455578
Q ss_pred hhhhhhhhhccccchhhHHHHHHHHHHhcccccchhhhcchhhhHHHH--HHHHHHHHHHhhcCCchhHHHHHHHHHHhh
Q psy8417 188 IIPLCLRIMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVA--MILGKMVISLEKDQSSRLLKHVVRCYLRLS 265 (326)
Q Consensus 188 IiPLCLriME~GsElSKtvAtfIlqKIL~dd~GL~YiC~T~eRF~aV~--~vL~~mV~~l~~~ps~RLLKhIIrCYlRLs 265 (326)
.+|.+++.+..++...|.-|.+.+..+...+ .+...++. .++..+|. |...+++.+.+++.++-..|.
T Consensus 168 gi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~---------~~~~~~vv~~g~i~~Lv~-LL~~~d~~v~~~al~aL~~l~ 237 (296)
T 1xqr_A 168 GFSVLMRAMQQQVQKLKVKSAFLLQNLLVGH---------PEHKGTLCSMGMVQQLVA-LVRTEHSPFHEHVLGALCSLV 237 (296)
T ss_dssp HHHHHHHHHHSSCHHHHHHHHHHHHHHHHHC---------GGGHHHHHHTTHHHHHHH-HHTSCCSTHHHHHHHHHHHHH
T ss_pred CHHHHHHHHcCCCHHHHHHHHHHHHHHHhCC---------hHHHHHHHHcCCHHHHHH-HHcCCChhHHHHHHHHHHHHH
Confidence 9999999999999999999999998887643 22222221 24444443 456679999999999998887
Q ss_pred cC-HHHHHHHHh---hCCcccccchhhhhh-cC-CHHHHHHHHHHHHHhcc
Q psy8417 266 DN-ARAREALRQ---CLPDQLRDSTFSVCL-ND-DKSTKNWLAQLIKNLES 310 (326)
Q Consensus 266 dn-~rar~aL~~---~LP~~Lrd~tf~~~l-~~-D~~~k~wl~qLl~nl~~ 310 (326)
.+ +.++...+. ++...|.. ....+- ++ ..+..+....++.+...
T Consensus 238 ~~~~~~~~~~~~~~~~l~~lL~~-~~~~lq~~e~~~e~~~~~~~il~~~f~ 287 (296)
T 1xqr_A 238 TDFPQGVRECREPELGLEELLRH-RCQLLQQHEEYQEELEFCEKLLQTCFS 287 (296)
T ss_dssp TTCHHHHHHHHCGGGCHHHHHHH-HHHHHTTCGGGHHHHHHHHHHHHHHCC
T ss_pred hCChhHHHHHhccHHHHHHHHHH-HHHHccchHHHHHHHHHHHHHHHHHcC
Confidence 76 444443332 23333433 233332 23 35667778888888764
No 7
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=97.16 E-value=0.013 Score=49.00 Aligned_cols=174 Identities=17% Similarity=0.149 Sum_probs=122.5
Q ss_pred HHHHHHHHHhhh-chhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhh
Q psy8417 116 CNALALLQCVAS-HQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLR 194 (326)
Q Consensus 116 CnaLaLLQcvAs-hpetR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLr 194 (326)
..++..|..+++ +++.+..++++...-.|..+|+..+ +.+|...+++++.+... +++....+.....+|..++
T Consensus 20 ~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~-----~~v~~~a~~~L~~l~~~-~~~~~~~~~~~~~i~~l~~ 93 (252)
T 4hxt_A 20 KEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTD-----SEVQKEAARALANIASG-PDEAIKAIVDAGGVEVLVK 93 (252)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSC-----HHHHHHHHHHHHHHTTS-CHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCC-----HHHHHHHHHHHHHHHcC-ChHHHHHHHHCCCHHHHHH
Confidence 355566666665 4569999999988888888887543 78899999999999874 3567778889999999999
Q ss_pred hhccccchhhHHHHHHHHHHhc-ccccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhc-CHHHHH
Q psy8417 195 IMESGSELSKTVATFILQKILL-DDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSD-NARARE 272 (326)
Q Consensus 195 iME~GsElSKtvAtfIlqKIL~-dd~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsd-n~rar~ 272 (326)
.++.+++-.+..|...+..+-. ++.....+.. ..++..++ ++.+++++.+.+...++--.|+. ++..+.
T Consensus 94 ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~--------~~~i~~L~-~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~ 164 (252)
T 4hxt_A 94 LLTSTDSEVQKEAARALANIASGPDEAIKAIVD--------AGGVEVLV-KLLTSTDSEVQKEAARALANIASGPDEAIK 164 (252)
T ss_dssp HTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHH--------TTHHHHHH-HHTTCSCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHH--------CCCHHHHH-HHHcCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence 9999999999999999888873 2222211111 12333333 45567889999999999999997 454444
Q ss_pred HHHh--hCCcccccchhhhhh-cCCHHHHHHHHHHHHHhcc
Q psy8417 273 ALRQ--CLPDQLRDSTFSVCL-NDDKSTKNWLAQLIKNLES 310 (326)
Q Consensus 273 aL~~--~LP~~Lrd~tf~~~l-~~D~~~k~wl~qLl~nl~~ 310 (326)
.+.. .+|. +..++ .+|+.++..-...+.|+..
T Consensus 165 ~~~~~~~i~~------L~~ll~~~~~~v~~~a~~~L~~l~~ 199 (252)
T 4hxt_A 165 AIVDAGGVEV------LVKLLTSTDSEVQKEAARALANIAS 199 (252)
T ss_dssp HHHHTTHHHH------HHHHTTCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHCcCHHH------HHHHHCCCCHHHHHHHHHHHHHHHc
Confidence 4432 1111 11222 3467888888888888764
No 8
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=97.13 E-value=0.018 Score=48.92 Aligned_cols=168 Identities=14% Similarity=0.146 Sum_probs=119.4
Q ss_pred HHhhhchhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccch
Q psy8417 123 QCVASHQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSEL 202 (326)
Q Consensus 123 QcvAshpetR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsEl 202 (326)
..+..+++.+..++++...-.|..+|+..+ +.+|...+++++.+...+ ++....+.....+|..++.++.+++-
T Consensus 38 ~~l~~~~~~~~~~~~~g~i~~L~~lL~~~~-----~~v~~~a~~~L~~l~~~~-~~~~~~i~~~g~i~~L~~lL~~~~~~ 111 (252)
T 4db8_A 38 QILSDGNEQIQAVIDAGALPALVQLLSSPN-----EQILQEALWALSNIASGG-NEQIQAVIDAGALPALVQLLSSPNEQ 111 (252)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHGGGCSC-----HHHHHHHHHHHHHHTTSC-HHHHHHHHHTTHHHHHHHGGGCSCHH
T ss_pred HHHcCCCchHHHHHHcCcHHHHHHHHcCCC-----HHHHHHHHHHHHHHhcCC-HHHHHHHHHcCCHHHHHHHHcCCCHH
Confidence 334447888999999998888888887543 778999999999998744 44556778889999999999999999
Q ss_pred hhHHHHHHHHHHhcccccc-hhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhc-CHHHHHHHHh-hCC
Q psy8417 203 SKTVATFILQKILLDDSGL-SYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSD-NARAREALRQ-CLP 279 (326)
Q Consensus 203 SKtvAtfIlqKIL~dd~GL-~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsd-n~rar~aL~~-~LP 279 (326)
.+..|...+..+-.++... ..+.. ..++..++. +..++++++.+...++...|+. ++..+..+.. ...
T Consensus 112 v~~~a~~~L~~l~~~~~~~~~~~~~--------~~~i~~L~~-lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i 182 (252)
T 4db8_A 112 ILQEALWALSNIASGGNEQIQAVID--------AGALPALVQ-LLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGAL 182 (252)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHH--------TTHHHHHHH-GGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHhhcCCchHHHHHHH--------CCCHHHHHH-HHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCH
Confidence 9999999999986554332 11111 123344443 4467799999999999999997 4455555432 111
Q ss_pred cccccchhhhhh-cCCHHHHHHHHHHHHHhcc
Q psy8417 280 DQLRDSTFSVCL-NDDKSTKNWLAQLIKNLES 310 (326)
Q Consensus 280 ~~Lrd~tf~~~l-~~D~~~k~wl~qLl~nl~~ 310 (326)
+ .+..++ .+|+.++..-...+.|+..
T Consensus 183 ~-----~L~~ll~~~~~~v~~~a~~~L~~l~~ 209 (252)
T 4db8_A 183 P-----ALVQLLSSPNEQILQEALWALSNIAS 209 (252)
T ss_dssp H-----HHHHGGGCSSHHHHHHHHHHHHHHTT
T ss_pred H-----HHHHHHCCCCHHHHHHHHHHHHHHhc
Confidence 1 112222 3478888888888888863
No 9
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=96.72 E-value=0.056 Score=51.52 Aligned_cols=198 Identities=14% Similarity=0.129 Sum_probs=134.0
Q ss_pred HHHHHHHHHhC--CcchHHHHHHHHHhhcccC--CChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHH
Q psy8417 45 EKIYQWILELS--IPETRENALLELSKKREVV--PDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALA 120 (326)
Q Consensus 45 ~~v~q~I~~L~--~p~~Re~AL~eLsk~re~~--~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLa 120 (326)
+.+-.++..|. +++.|..|+..|.+.-... +....++ .-|.+..|++=+-+- + ...-| ..|+.
T Consensus 74 ~~l~~lv~~L~s~~~~~~~~A~~~L~~l~s~~~~~~~~~~~--~~g~v~~Lv~lL~~~-------~---~~~v~-~~A~~ 140 (528)
T 4b8j_A 74 ESLPAMIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVI--QSGVVPRFVQFLTRE-------D---FPQLQ-FEAAW 140 (528)
T ss_dssp -CHHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSSCCHHHHH--HTTCHHHHHHHHTCT-------T---CHHHH-HHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCCCchHHHHH--HCCCHHHHHHHhCCC-------C---CHHHH-HHHHH
Confidence 34555666665 4667899998887763322 3333332 347787777644321 0 01112 24555
Q ss_pred HHHHhhhc-hhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhh-cc
Q psy8417 121 LLQCVASH-QETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIM-ES 198 (326)
Q Consensus 121 LLQcvAsh-petR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriM-E~ 198 (326)
.|..++++ ++.+..++++...-.|..+|+. +.+.+|-..++++|.|.. ++++.-..+.....+|..++.+ +.
T Consensus 141 ~L~~l~~~~~~~~~~~~~~g~i~~L~~lL~~-----~~~~v~~~a~~aL~~l~~-~~~~~~~~i~~~g~l~~Ll~lL~~~ 214 (528)
T 4b8j_A 141 ALTNIASGTSENTKVVIDHGAVPIFVKLLGS-----SSDDVREQAVWALGNVAG-DSPKCRDLVLANGALLPLLAQLNEH 214 (528)
T ss_dssp HHHHHHTSCHHHHHHHHHTTHHHHHHHHTTC-----SCHHHHHHHHHHHHHHHH-TCHHHHHHHHHTTCHHHHHHTCCTT
T ss_pred HHHHHhCCCHHHHHHHHhCCcHHHHHHHhcC-----CCHHHHHHHHHHHHHHhC-CChhhHHHHHHCCcHHHHHHHHhcC
Confidence 66677776 8999999998877677777764 356889999999999986 4566777888899999999999 56
Q ss_pred ccchhhHHHHHHHHHHhcccccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhcCHHH
Q psy8417 199 GSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARA 270 (326)
Q Consensus 199 GsElSKtvAtfIlqKIL~dd~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsdn~ra 270 (326)
.+.-.+.-|+..+..+..+... .++..+..++..++.- ...+++.+...+.++...|++++..
T Consensus 215 ~~~~v~~~a~~~L~~L~~~~~~--------~~~~~~~~~l~~L~~l-L~~~~~~v~~~a~~aL~~l~~~~~~ 277 (528)
T 4b8j_A 215 TKLSMLRNATWTLSNFCRGKPQ--------PSFEQTRPALPALARL-IHSNDEEVLTDACWALSYLSDGTND 277 (528)
T ss_dssp CCHHHHHHHHHHHHHHHCSSSC--------CCHHHHTTHHHHHHHH-TTCCCHHHHHHHHHHHHHHTSSCHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCC--------CcHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHcCCHH
Confidence 6666777888888877665421 2334444555555543 4667899999999999999987543
No 10
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=96.17 E-value=0.27 Score=48.72 Aligned_cols=195 Identities=11% Similarity=0.041 Sum_probs=127.9
Q ss_pred CcchHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHHhhhchhhHHHH
Q psy8417 56 IPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASHQETRSLF 135 (326)
Q Consensus 56 ~p~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQcvAshpetR~~F 135 (326)
+++.|+.|...|.+--+..++ -..+....|.+..|++-+.+- + ....| -++...|..++.+++.|..+
T Consensus 27 ~~~vr~~A~~~L~~La~~~~~-~~~i~~~~~~i~~Lv~~L~~~------~----~~~~~-~~A~~~L~~Ls~~~~~~~~i 94 (644)
T 2z6h_A 27 DQVVVNKAAVMVHQLSKKEAS-RHAIMRSPQMVSAIVRTMQNT------N----DVETA-RCTAGTLHNLSHHREGLLAI 94 (644)
T ss_dssp CHHHHHHHHHHHHHHHTSTTH-HHHHTTCHHHHHHHHHHHHSC------C----CHHHH-HHHHHHHHHHTTSHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCChh-HHHHHhccChHHHHHHHHhcC------C----CHHHH-HHHHHHHHHHhcChhhHHHH
Confidence 567788888877765543332 223455567787777665431 1 11122 24555666899999999999
Q ss_pred HhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHHh
Q psy8417 136 LAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKIL 215 (326)
Q Consensus 136 L~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKIL 215 (326)
.++...--|..+|+.. .+.+|...+.+++.|...++ +....+.....+|..++.+..++.--+..|...+..+-
T Consensus 95 ~~~g~i~~Lv~lL~~~-----~~~v~~~A~~aL~nL~~~~~-~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La 168 (644)
T 2z6h_A 95 FKSGGIPALVKMLGSP-----VDSVLFYAITTLHNLLLHQE-GAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILA 168 (644)
T ss_dssp HTTTHHHHHHHHTTCS-----SHHHHHHHHHHHHHHHHHST-THHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHhCC-----CHHHHHHHHHHHHHHHhCcc-hhHHHHHHCCChHHHHHHHCcCCHHHHHHHHHHHHHHH
Confidence 8887655566666542 47899999999999988653 34456667899999999999987755666666777766
Q ss_pred c-ccccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhcCHHHHHHHHh
Q psy8417 216 L-DDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQ 276 (326)
Q Consensus 216 ~-dd~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsdn~rar~aL~~ 276 (326)
. ++..-..++.. ..+...+.-+.......+.....++-..|+.++..|..+.+
T Consensus 169 ~~~~~~~~~i~~~--------g~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~~~~~~~~l~~ 222 (644)
T 2z6h_A 169 YGNQESKLIILAS--------GGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVE 222 (644)
T ss_dssp TTCHHHHHHHHHT--------THHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred hcCcHHHHHHHHc--------CChHHHHHHHHcCChHHHHHHHHHHHHHHhcCcccHHHHHH
Confidence 4 33322222211 12334444444444457778888888888888888877765
No 11
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=96.10 E-value=0.19 Score=47.93 Aligned_cols=219 Identities=15% Similarity=0.152 Sum_probs=134.5
Q ss_pred CcchHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHHhhhchhhH-HH
Q psy8417 56 IPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASHQETR-SL 134 (326)
Q Consensus 56 ~p~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQcvAshpetR-~~ 134 (326)
+++.|++|..-|+.--...|.-.... ..|.+..|++=+ ..+ .. .-..+++..|-.++.+++.+ ..
T Consensus 216 ~~~v~~~a~~~L~~L~~~~~~~~~~~--~~~~l~~L~~lL-------~~~--~~---~v~~~a~~aL~~l~~~~~~~~~~ 281 (528)
T 4b8j_A 216 KLSMLRNATWTLSNFCRGKPQPSFEQ--TRPALPALARLI-------HSN--DE---EVLTDACWALSYLSDGTNDKIQA 281 (528)
T ss_dssp CHHHHHHHHHHHHHHHCSSSCCCHHH--HTTHHHHHHHHT-------TCC--CH---HHHHHHHHHHHHHTSSCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCCCcHHH--HHHHHHHHHHHH-------CCC--CH---HHHHHHHHHHHHHHcCCHHHHHH
Confidence 45556766666655433323222211 245555554422 221 12 22335555566677666544 57
Q ss_pred HHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccc-cchhhHHHHHHHHH
Q psy8417 135 FLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESG-SELSKTVATFILQK 213 (326)
Q Consensus 135 FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~G-sElSKtvAtfIlqK 213 (326)
++++.+.-.|..+|... -+.+|...++++|.++..+ ++....++...++|..++.+..+ +.-.+.-|...+..
T Consensus 282 ~~~~g~v~~Lv~lL~~~-----~~~v~~~a~~~L~nl~~~~-~~~~~~~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~n 355 (528)
T 4b8j_A 282 VIEAGVCPRLVELLLHP-----SPSVLIPALRTVGNIVTGD-DAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISN 355 (528)
T ss_dssp HHHTTCHHHHHHHTTCS-----CHHHHHHHHHHHHHHTTSC-HHHHHHHHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred HHHcCHHHHHHHHHcCC-----ChhHHHHHHHHHHHHHcCC-HHHHHHHHHhhhHHHHHHHHcCCCcHHHHHHHHHHHHH
Confidence 77878777777787654 3678999999999999854 45667788899999999999999 88888889999988
Q ss_pred Hhccc-ccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhcC--HHHHHHHHh--hCCcccccchhh
Q psy8417 214 ILLDD-SGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDN--ARAREALRQ--CLPDQLRDSTFS 288 (326)
Q Consensus 214 IL~dd-~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsdn--~rar~aL~~--~LP~~Lrd~tf~ 288 (326)
|...+ ....++... .++..++.-+ ...++++-+.+..+...|+.+ +..+..|.+ ++| .+.
T Consensus 356 l~~~~~~~~~~~~~~--------~~i~~L~~lL-~~~~~~v~~~a~~aL~nl~~~~~~~~~~~l~~~~~i~------~L~ 420 (528)
T 4b8j_A 356 ITAGNKDQIQAVINA--------GIIGPLVNLL-QTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIK------PLC 420 (528)
T ss_dssp HHTSCHHHHHHHHHT--------TCHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHH------HHH
T ss_pred HHCCCHHHHHHHHHC--------CCHHHHHHHH-hcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHH------HHH
Confidence 86532 112222111 2333333333 345888999999998888875 665655542 222 122
Q ss_pred hhh-cCCHHHHHHHHHHHHHhc
Q psy8417 289 VCL-NDDKSTKNWLAQLIKNLE 309 (326)
Q Consensus 289 ~~l-~~D~~~k~wl~qLl~nl~ 309 (326)
.++ .+|+.++.+....+.|+-
T Consensus 421 ~lL~~~d~~v~~~al~~L~~l~ 442 (528)
T 4b8j_A 421 DLLICPDIRIVTVCLEGLENIL 442 (528)
T ss_dssp HGGGCSCHHHHHHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHHHHHHH
Confidence 233 347777777766666663
No 12
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=96.08 E-value=0.28 Score=44.69 Aligned_cols=223 Identities=15% Similarity=0.165 Sum_probs=137.8
Q ss_pred CCcchHHHHHHHHHhhc--ccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHHhhhc-hhh
Q psy8417 55 SIPETRENALLELSKKR--EVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASH-QET 131 (326)
Q Consensus 55 ~~p~~Re~AL~eLsk~r--e~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQcvAsh-pet 131 (326)
-+++.|+.|+..|.+.- +.-+.... +-.+.|.+..|++-+.+- . ...-| ..++..|..++++ ++.
T Consensus 32 ~~~~~r~~A~~~L~~l~~~~~~~~~~~-~~~~~~~i~~L~~~L~~~------~----~~~v~-~~a~~~L~~l~~~~~~~ 99 (450)
T 2jdq_A 32 KSPEQQLSATQKFRKLLSKEPNPPIDE-VISTPGVVARFVEFLKRK------E----NCTLQ-FESAWVLTNIASGNSLQ 99 (450)
T ss_dssp SCHHHHHHHHHHHHHHHHSSSSCCHHH-HHTSTTHHHHHHHHHTCT------T----CHHHH-HHHHHHHHHHHSSCHHH
T ss_pred CCHHHHHHHHHHHHHHhcCCCCCcHHH-HHHcCCcHHHHHHHHCCC------C----CHHHH-HHHHHHHHHHhcCCHHH
Confidence 36677999999998753 22344322 223337777776654321 0 11112 3566677777774 577
Q ss_pred HHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhcc-ccchhhHHHHHH
Q psy8417 132 RSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMES-GSELSKTVATFI 210 (326)
Q Consensus 132 R~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~-GsElSKtvAtfI 210 (326)
+..++++...-.|..+|+. +.+.+|...+.++|.+...+ ++.-..+...+++|..++.++. .+.--+..|...
T Consensus 100 ~~~~~~~~~i~~L~~lL~~-----~~~~vr~~a~~~L~~l~~~~-~~~~~~~~~~~~i~~L~~~l~~~~~~~v~~~a~~~ 173 (450)
T 2jdq_A 100 TRIVIQAGAVPIFIELLSS-----EFEDVQEQAVWALGNIAGDS-TMCRDYVLDCNILPPLLQLFSKQNRLTMTRNAVWA 173 (450)
T ss_dssp HHHHHHTTHHHHHHHHTTC-----SCHHHHHHHHHHHHHHHTTC-HHHHHHHHHTTCHHHHHHHTTSCCCHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHcC-----CCHHHHHHHHHHHHHHccCC-HHHHHHHHHCCCHHHHHHHhcCCCCHHHHHHHHHH
Confidence 7777777766666666653 35688999999999998854 5566778888999999999985 566677788888
Q ss_pred HHHHhccc-ccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhcCH-HHHHHHHh--hCCcccccch
Q psy8417 211 LQKILLDD-SGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNA-RAREALRQ--CLPDQLRDST 286 (326)
Q Consensus 211 lqKIL~dd-~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsdn~-rar~aL~~--~LP~~Lrd~t 286 (326)
+..+..++ .... +..+..++..++.- ..++++.+.+....+...|+++. ..+..+.. .+|.
T Consensus 174 L~~l~~~~~~~~~--------~~~~~~~l~~L~~~-l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~------ 238 (450)
T 2jdq_A 174 LSNLCRGKSPPPE--------FAKVSPCLNVLSWL-LFVSDTDVLADACWALSYLSDGPNDKIQAVIDAGVCRR------ 238 (450)
T ss_dssp HHHHHCCSSSCCC--------GGGTGGGHHHHHHH-TTCCCHHHHHHHHHHHHHHTSSSHHHHHHHHHTTTHHH------
T ss_pred HHHHhCCCCCCCC--------HHHHHHHHHHHHHH-HccCCHHHHHHHHHHHHHHHCCCcHHHHHHHHcCcHHH------
Confidence 88887654 2211 11112333434433 34667889999999999998853 32322221 1221
Q ss_pred hhhhh-cCCHHHHHHHHHHHHHhcc
Q psy8417 287 FSVCL-NDDKSTKNWLAQLIKNLES 310 (326)
Q Consensus 287 f~~~l-~~D~~~k~wl~qLl~nl~~ 310 (326)
+..++ .+|+.++..-...+.|+..
T Consensus 239 L~~ll~~~~~~v~~~a~~~L~~l~~ 263 (450)
T 2jdq_A 239 LVELLMHNDYKVVSPALRAVGNIVT 263 (450)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHCCCchhHHHHHHHHHHHHhh
Confidence 11222 3466666666666666654
No 13
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=95.57 E-value=0.81 Score=43.75 Aligned_cols=175 Identities=14% Similarity=0.148 Sum_probs=111.0
Q ss_pred HHHHHHHHHhhhc-hhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhh
Q psy8417 116 CNALALLQCVASH-QETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLR 194 (326)
Q Consensus 116 CnaLaLLQcvAsh-petR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLr 194 (326)
.+++..|-.++.+ ++.+..++++.+.-.|..+|+.. -+.+|...+.++|.+...++ +....++...++|.++.
T Consensus 275 ~~a~~~L~~L~~~~~~~~~~~~~~~~v~~Lv~lL~~~-----~~~v~~~a~~~L~~l~~~~~-~~~~~~~~~~~l~~L~~ 348 (530)
T 1wa5_B 275 VDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHE-----STLVQTPALRAVGNIVTGND-LQTQVVINAGVLPALRL 348 (530)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCS-----CHHHHHHHHHHHHHHTTSCH-HHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHhcCcHHHHHHHHCCC-----ChhhHHHHHHHHHHHHcCCH-HHHHHHHHcchHHHHHH
Confidence 4555666677755 67788888888888888888742 36789999999999998654 45566778899999999
Q ss_pred hhccccchhhHHHHHHHHHHhccc-ccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhcC--H--H
Q psy8417 195 IMESGSELSKTVATFILQKILLDD-SGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDN--A--R 269 (326)
Q Consensus 195 iME~GsElSKtvAtfIlqKIL~dd-~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsdn--~--r 269 (326)
.+..++.--+..|...+..|-... ....++.. ..++..++.-+ .++++++-+.+.++--.|+.+ + .
T Consensus 349 lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~--------~~~l~~L~~lL-~~~~~~v~~~a~~aL~~l~~~~~~~~~ 419 (530)
T 1wa5_B 349 LLSSPKENIKKEACWTISNITAGNTEQIQAVID--------ANLIPPLVKLL-EVAEYKTKKEACWAISNASSGGLQRPD 419 (530)
T ss_dssp HTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHH--------TTCHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHTTTCTH
T ss_pred HHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHH--------CCCHHHHHHHH-hcCCHHHHHHHHHHHHHHHhcCCCcHH
Confidence 999998888888999988876422 11111110 12233333332 346777778887777777653 2 2
Q ss_pred HHHHHHhhCCcccccchhhhhh-cCCHHHHHHHHHHHHHhc
Q psy8417 270 AREALRQCLPDQLRDSTFSVCL-NDDKSTKNWLAQLIKNLE 309 (326)
Q Consensus 270 ar~aL~~~LP~~Lrd~tf~~~l-~~D~~~k~wl~qLl~nl~ 309 (326)
.+..+.+. ..- ..+..++ .+|+.++.+....+.|+-
T Consensus 420 ~~~~l~~~---~~l-~~L~~ll~~~~~~v~~~al~aL~~l~ 456 (530)
T 1wa5_B 420 IIRYLVSQ---GCI-KPLCDLLEIADNRIIEVTLDALENIL 456 (530)
T ss_dssp HHHHHHHT---TCH-HHHHHHTTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHC---CCH-HHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 33333220 011 1122222 346777777666666664
No 14
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=95.43 E-value=1 Score=42.04 Aligned_cols=194 Identities=11% Similarity=0.032 Sum_probs=117.3
Q ss_pred CcchHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHHhhhchhhHHHH
Q psy8417 56 IPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASHQETRSLF 135 (326)
Q Consensus 56 ~p~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQcvAshpetR~~F 135 (326)
+++.|++|...|.+--+.- +-...+....|.+..|++-+.+- + +. . -.-++...|..++.+++.|..+
T Consensus 30 ~~~v~~~A~~~L~~l~~~~-~~~~~~~~~~~~i~~Lv~~L~~~------~--~~--~-~~~~a~~~L~~ls~~~~~~~~i 97 (529)
T 1jdh_A 30 DQVVVNKAAVMVHQLSKKE-ASRHAIMRSPQMVSAIVRTMQNT------N--DV--E-TARCTAGTLHNLSHHREGLLAI 97 (529)
T ss_dssp CHHHHHHHHHHHHHHHTSH-HHHHHHHTCHHHHHHHHHHHHHC------C--CH--H-HHHHHHHHHHHHTTSHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCC-ccHHHHHhCcchHHHHHHHHhcC------C--CH--H-HHHHHHHHHHHHHcCchhHHHH
Confidence 5566888877766543221 11223445567777777655431 0 11 1 1225556666789999999999
Q ss_pred HhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHHh
Q psy8417 136 LAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKIL 215 (326)
Q Consensus 136 L~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKIL 215 (326)
.++...-.|..+|+.. .+.+|...+++++.+...++ +....+.+...+|..++.+..++.-.+..|...+..+-
T Consensus 98 ~~~g~i~~L~~lL~~~-----~~~v~~~a~~~L~~l~~~~~-~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la 171 (529)
T 1jdh_A 98 FKSGGIPALVKMLGSP-----VDSVLFYAITTLHNLLLHQE-GAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILA 171 (529)
T ss_dssp HHTTHHHHHHHHTTCS-----CHHHHHHHHHHHHHHHHHCT-THHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHcCC-----CHHHHHHHHHHHHHHhcCCc-chHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 9987766677777643 36789999999999988643 23456667899999999999988777777777777665
Q ss_pred cc-cccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhcCHHHHHHHH
Q psy8417 216 LD-DSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALR 275 (326)
Q Consensus 216 ~d-d~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsdn~rar~aL~ 275 (326)
.+ +....-++.. ..+..++.-+.............++-..|+.++..|..+.
T Consensus 172 ~~~~~~~~~i~~~--------~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~ 224 (529)
T 1jdh_A 172 YGNQESKLIILAS--------GGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIV 224 (529)
T ss_dssp TTCHHHHHHHHHT--------THHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHHH
T ss_pred hCCHHHHHHHHHC--------CCHHHHHHHHHhCChHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 43 2222222211 1122223322222233444555666666666666555543
No 15
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=95.32 E-value=2.1 Score=40.89 Aligned_cols=229 Identities=14% Similarity=0.121 Sum_probs=142.2
Q ss_pred HHHHHHHhC--CcchHHHHHHHHHhhccc--CCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHH
Q psy8417 47 IYQWILELS--IPETRENALLELSKKREV--VPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALL 122 (326)
Q Consensus 47 v~q~I~~L~--~p~~Re~AL~eLsk~re~--~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLL 122 (326)
+-.++..|. +++.|..|+..|.+.-.. -+.... + -..|.+..|++= |..+. ...-| ..|+..|
T Consensus 89 i~~lv~~L~s~~~~~~~~A~~~L~~ll~~~~~~~~~~-~-~~~g~i~~Lv~~-------L~~~~---~~~v~-~~A~~~L 155 (530)
T 1wa5_B 89 LPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDV-V-IQAGVVPRLVEF-------MRENQ---PEMLQ-LEAAWAL 155 (530)
T ss_dssp HHHHHHHHSCSSHHHHHHHHHHHHHHTCCSSSCSHHH-H-HHTTCHHHHHHT-------TSTTS---CHHHH-HHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCccHHH-H-HHCCCHHHHHHH-------hCCCC---CHHHH-HHHHHHH
Confidence 445555555 456789999998876432 343322 2 245777776652 22210 11112 3566667
Q ss_pred HHhhhc-hhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccc
Q psy8417 123 QCVASH-QETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSE 201 (326)
Q Consensus 123 QcvAsh-petR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsE 201 (326)
..++++ ++.+..++++...-.|.-+|+. +.+.+|-..++++|.+... +++.-..+....++|..++.+..++.
T Consensus 156 ~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~-----~~~~vr~~A~~aL~~l~~~-~~~~~~~~~~~~~l~~L~~ll~~~~~ 229 (530)
T 1wa5_B 156 TNIASGTSAQTKVVVDADAVPLFIQLLYT-----GSVEVKEQAIWALGNVAGD-STDYRDYVLQCNAMEPILGLFNSNKP 229 (530)
T ss_dssp HHHTTSCHHHHHHHHHTTCHHHHHHHHHH-----CCHHHHHHHHHHHHHHHTT-CHHHHHHHHHTTCHHHHHHGGGSCCH
T ss_pred HHHhCCCHHHHHHHHHCCCHHHHHHHHcC-----CCHHHHHHHHHHHHHHhCC-CccchHHHHHcCcHHHHHHHhccCCH
Confidence 777775 6788888888776666666663 3567899999999999874 34556677888999999999998776
Q ss_pred hhhHHHHHHHHHHhccc-ccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhcC-HHHHHHHHh--h
Q psy8417 202 LSKTVATFILQKILLDD-SGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDN-ARAREALRQ--C 277 (326)
Q Consensus 202 lSKtvAtfIlqKIL~dd-~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsdn-~rar~aL~~--~ 277 (326)
-.+..|...+..+..++ ... .+..+..++..++. +..++++.+...+.++...|+++ +..+..+.. .
T Consensus 230 ~v~~~a~~~L~~L~~~~~~~~--------~~~~~~~~l~~L~~-lL~~~d~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~ 300 (530)
T 1wa5_B 230 SLIRTATWTLSNLCRGKKPQP--------DWSVVSQALPTLAK-LIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRI 300 (530)
T ss_dssp HHHHHHHHHHHHHHCCSSSCC--------CHHHHGGGHHHHHH-HTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhCCCCCCC--------cHHHHHhHHHHHHH-HHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCc
Confidence 67777888888877654 221 12333344444444 34567889999999999999975 333333332 1
Q ss_pred CCcccccchhhhhh-cCCHHHHHHHHHHHHHhc
Q psy8417 278 LPDQLRDSTFSVCL-NDDKSTKNWLAQLIKNLE 309 (326)
Q Consensus 278 LP~~Lrd~tf~~~l-~~D~~~k~wl~qLl~nl~ 309 (326)
+|. +..++ ..|+.++..-...+.|+.
T Consensus 301 v~~------Lv~lL~~~~~~v~~~a~~~L~~l~ 327 (530)
T 1wa5_B 301 PKR------LVELLSHESTLVQTPALRAVGNIV 327 (530)
T ss_dssp HHH------HHHGGGCSCHHHHHHHHHHHHHHT
T ss_pred HHH------HHHHHCCCChhhHHHHHHHHHHHH
Confidence 111 11122 235556655555666664
No 16
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=94.78 E-value=2.6 Score=39.26 Aligned_cols=231 Identities=13% Similarity=0.107 Sum_probs=131.9
Q ss_pred CcchHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHHhhhc-hh---h
Q psy8417 56 IPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASH-QE---T 131 (326)
Q Consensus 56 ~p~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQcvAsh-pe---t 131 (326)
+++.|+.|..-|+.--..-++....++. .|.+..|++-+.+.-. ...-..+++..|..++.+ |+ .
T Consensus 279 ~~~v~~~a~~~L~~L~~~~~~~~~~~~~-~~~v~~L~~ll~~~~~----------~~~v~~~a~~~L~nl~~~~~~~~~~ 347 (529)
T 1jdh_A 279 DINVVTCAAGILSNLTCNNYKNKMMVCQ-VGGIEALVRTVLRAGD----------REDITEPAICALRHLTSRHQEAEMA 347 (529)
T ss_dssp CHHHHHHHHHHHHHHTTTCHHHHHHHHH-TTHHHHHHHHHHHHTT----------CHHHHHHHHHHHHHHTSSSTTHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHH-cCChHHHHHHHHccCC----------HHHHHHHHHHHHHHHHcCCchHHHH
Confidence 5566777776666543333334444554 4566666655543210 012335677777777765 44 5
Q ss_pred HHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHHHHH
Q psy8417 132 RSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFIL 211 (326)
Q Consensus 132 R~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAtfIl 211 (326)
|..++++...-.|..+|... ..+.+|-..+++++-+...++.. ..+.+..++|..+..+..++.-.|.-|.+.+
T Consensus 348 ~~~i~~~~~i~~L~~lL~~~----~~~~v~~~a~~~l~nl~~~~~~~--~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~l 421 (529)
T 1jdh_A 348 QNAVRLHYGLPVVVKLLHPP----SHWPLIKATVGLIRNLALCPANH--APLREQGAIPRLVQLLVRAHQDTQRRTSMGG 421 (529)
T ss_dssp HHHHHHTTCHHHHHHTTSTT----CCHHHHHHHHHHHHHHTTSGGGH--HHHHHTTHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHcCChhHHHHHhccc----cchHHHHHHHHHHHHHhcChhhh--HHHHHcCCHHHHHHHHHHHhHHHHHHHhccc
Confidence 78888887765566666533 23578888999999988755432 5777889999999998877655555454433
Q ss_pred HHHhcccc------------cchhhhcchh-hhHHHH-HHHHHHHHHHhhcCCchhHHHHHHHHHHhhcCHHHHHHHHhh
Q psy8417 212 QKILLDDS------------GLSYICQTYD-RFSHVA-MILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQC 277 (326)
Q Consensus 212 qKIL~dd~------------GL~YiC~T~e-RF~aV~-~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsdn~rar~aL~~~ 277 (326)
...-..+. .|...|...+ |..-+. .++ ..+..+..++++.+.+....+...|+.++..+..+.++
T Consensus 422 ~n~~~~~~~~~~~i~~~~~~al~~L~~~~~~~~~l~~~~~v-~~l~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~i~~~ 500 (529)
T 1jdh_A 422 TQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTI-PLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAE 500 (529)
T ss_dssp ----CBTTBCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCH-HHHHHGGGCSCHHHHHHHHHHHHHHTTSHHHHHHHHHT
T ss_pred CchhhhccccHHHHHHHHHHHHHHHhcCchHHHHHhccCCc-cHHHHHHcCCchHHHHHHHHHHHHHhcCHHHHHHHHHc
Confidence 32100111 1122222221 100000 111 23345667889999999999999999998888877652
Q ss_pred CCcccccchhhhhh-cCCHHHHHHHHHHHHHh
Q psy8417 278 LPDQLRDSTFSVCL-NDDKSTKNWLAQLIKNL 308 (326)
Q Consensus 278 LP~~Lrd~tf~~~l-~~D~~~k~wl~qLl~nl 308 (326)
= -. ..+..++ ..|+.+++.-...+.++
T Consensus 501 ~---~~-~~L~~l~~~~~~~v~~~a~~aL~~l 528 (529)
T 1jdh_A 501 G---AT-APLTELLHSRNEGVATYAAAVLFRM 528 (529)
T ss_dssp T---CH-HHHHHGGGCSSHHHHHHHHHHHHHH
T ss_pred C---Ch-HHHHHHhcCCCHHHHHHHHHHHHhc
Confidence 1 00 1223333 34888888877777765
No 17
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=93.21 E-value=4.7 Score=36.54 Aligned_cols=218 Identities=15% Similarity=0.113 Sum_probs=128.3
Q ss_pred cchHHHHHHHHHhhcccC-CChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHHhhhc-hhhHHH
Q psy8417 57 PETRENALLELSKKREVV-PDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASH-QETRSL 134 (326)
Q Consensus 57 p~~Re~AL~eLsk~re~~-~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQcvAsh-petR~~ 134 (326)
++.|+.|+.-|+.--... |.....+. .|.+..|++=+ ..+ . ..-..++...|-.++.+ ++.+..
T Consensus 164 ~~v~~~a~~~L~~l~~~~~~~~~~~~~--~~~l~~L~~~l-------~~~--~---~~v~~~a~~~L~~l~~~~~~~~~~ 229 (450)
T 2jdq_A 164 LTMTRNAVWALSNLCRGKSPPPEFAKV--SPCLNVLSWLL-------FVS--D---TDVLADACWALSYLSDGPNDKIQA 229 (450)
T ss_dssp HHHHHHHHHHHHHHHCCSSSCCCGGGT--GGGHHHHHHHT-------TCC--C---HHHHHHHHHHHHHHTSSSHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCHHHH--HHHHHHHHHHH-------ccC--C---HHHHHHHHHHHHHHHCCCcHHHHH
Confidence 455777776666543322 22221111 45566555432 111 1 12223555556666664 566777
Q ss_pred HHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHH
Q psy8417 135 FLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKI 214 (326)
Q Consensus 135 FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKI 214 (326)
+.++.+.-.|..+|.. +-+.+|-..++.+|.+...++ +....++...++|..++.++.++.--|.-|...+..|
T Consensus 230 ~~~~~~i~~L~~ll~~-----~~~~v~~~a~~~L~~l~~~~~-~~~~~~~~~~~l~~L~~ll~~~~~~vr~~a~~~L~~l 303 (450)
T 2jdq_A 230 VIDAGVCRRLVELLMH-----NDYKVVSPALRAVGNIVTGDD-IQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNI 303 (450)
T ss_dssp HHHTTTHHHHHHHTTC-----SCHHHHHHHHHHHHHHTTSCH-HHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred HHHcCcHHHHHHHHCC-----CchhHHHHHHHHHHHHhhCCh-HHHHHHHHCccHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 7777776666677752 235788999999999998654 4566777889999999999999888888899999887
Q ss_pred hcc-cccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhc--CHHHHHHHHh--hCCcccccchhhh
Q psy8417 215 LLD-DSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSD--NARAREALRQ--CLPDQLRDSTFSV 289 (326)
Q Consensus 215 L~d-d~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsd--n~rar~aL~~--~LP~~Lrd~tf~~ 289 (326)
-.. +.....+.. ..++..++..+ .++++++-+....+-..++. ++.....+.+ .+|. +..
T Consensus 304 ~~~~~~~~~~~~~--------~~~l~~L~~~l-~~~~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~i~~------L~~ 368 (450)
T 2jdq_A 304 TAGNRAQIQTVID--------ANIFPALISIL-QTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKP------LCD 368 (450)
T ss_dssp TTSCHHHHHHHHH--------TTHHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHH------HHH
T ss_pred HcCCHHHHHHHHH--------CCCHHHHHHHH-hcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHH------HHH
Confidence 642 222111111 12333333333 35678888888888888875 3443333321 2221 222
Q ss_pred hh-cCCHHHHHHHHHHHHHhc
Q psy8417 290 CL-NDDKSTKNWLAQLIKNLE 309 (326)
Q Consensus 290 ~l-~~D~~~k~wl~qLl~nl~ 309 (326)
++ .+|+.+++.-...+.|+-
T Consensus 369 ll~~~~~~v~~~a~~aL~~l~ 389 (450)
T 2jdq_A 369 LLTVMDSKIVQVALNGLENIL 389 (450)
T ss_dssp GGGSSCHHHHHHHHHHHHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHHH
Confidence 23 236677776666666654
No 18
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=93.16 E-value=0.97 Score=42.74 Aligned_cols=161 Identities=14% Similarity=0.102 Sum_probs=114.3
Q ss_pred CChhhhhhHHHHHHHHHHhhhchhhHHHHHhhccccccccccccc------CCCCCccchhhhhhhhhhhhhccchHHHH
Q psy8417 107 LTAHQSNRVCNALALLQCVASHQETRSLFLAAHIPLFLYPFLHTT------SKTRPFEYLRLTSLGVIGALVKTDEQEVI 180 (326)
Q Consensus 107 Lt~~~SnRVCnaLaLLQcvAshpetR~~FL~A~iplyLyPfLntt------sk~r~fE~LRLtSLGVIgaLvK~dd~evI 180 (326)
.....-..+|.|+..|+-++.++|.|..+++....-.|-.+|... ........+|-....++.-|.+.++..-.
T Consensus 41 ~~~~~~~~~~~A~~aL~nls~d~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~~q~~Aa~aL~nLa~~~~~~k~ 120 (354)
T 3nmw_A 41 MPAPVEHQICPAVCVLMKLSFDEEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKA 120 (354)
T ss_dssp CCCGGGGTHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHTSSCHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence 334445689999999999999999999999999988888888532 11112345777788888888887663222
Q ss_pred HHHHhhchhhhhhhhhccccchhhHHHHHHHHHHhcc-c-ccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHH
Q psy8417 181 TFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLD-D-SGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVV 258 (326)
Q Consensus 181 ~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKIL~d-d-~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhII 258 (326)
.+.-....||..++.+.++++-.+..|...+..+-.. + ..-..+.. +..+..+|.-|.+.+++...+...
T Consensus 121 ~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~--------~G~Ip~Lv~lL~~~~~~~~~~~A~ 192 (354)
T 3nmw_A 121 TLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLRE--------VGSVKALMECALEVKKESTLKSVL 192 (354)
T ss_dssp HHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHH--------TTHHHHHHHHHHHCCCHHHHHHHH
T ss_pred HHHHcCCcHHHHHHHHCCCCHHHHHHHHHHHHHHhccCCHHHHHHHHH--------CCCHHHHHHHHhcCCCHHHHHHHH
Confidence 2223456799999999999999999999998887542 1 11111111 134556666666677889999999
Q ss_pred HHHHHhhc-CHHHHHHHH
Q psy8417 259 RCYLRLSD-NARAREALR 275 (326)
Q Consensus 259 rCYlRLsd-n~rar~aL~ 275 (326)
++-..||. ++..|..+.
T Consensus 193 ~aL~nLs~~~~~nk~~i~ 210 (354)
T 3nmw_A 193 SALWNLSAHCTENKADIC 210 (354)
T ss_dssp HHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHccChhhhHHHH
Confidence 99999988 655555553
No 19
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=92.86 E-value=3 Score=40.31 Aligned_cols=222 Identities=11% Similarity=0.186 Sum_probs=130.2
Q ss_pred CcchHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHHhhh-chhhHHH
Q psy8417 56 IPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVAS-HQETRSL 134 (326)
Q Consensus 56 ~p~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQcvAs-hpetR~~ 134 (326)
+++.+++|..-|+.--+..++....+- ..|.+..|++=+- .+ ...-..+++..|-.+++ +++.+..
T Consensus 245 ~~~v~~~A~~aL~~L~~~~~~~~~~i~-~~g~i~~Lv~lL~-------~~-----~~~v~~~al~aL~nl~~~~~~~~~~ 311 (510)
T 3ul1_B 245 DPEVLADSCWAISYLTDGPNERIEMVV-KKGVVPQLVKLLG-------AT-----ELPIVTPALRAIGNIVTGTDEQTQK 311 (510)
T ss_dssp CHHHHHHHHHHHHHHTSSCHHHHHHHH-TTTCHHHHHHHHT-------CS-----CHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhchhhhHHHHH-hcccchhhhhhhc-------CC-----ChhhhhHHHHHHHHhhcCCHHHHHH
Confidence 445577777766665544333333333 3466655554322 11 11223455555656654 5566778
Q ss_pred HHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHH
Q psy8417 135 FLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKI 214 (326)
Q Consensus 135 FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKI 214 (326)
++++...-.|..+|+. +-+.+|-...++++-|... +++-+..+.+..++|..++.++.++.-.|.-|...+..+
T Consensus 312 i~~~g~l~~L~~LL~~-----~~~~v~~~A~~aL~nl~a~-~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl 385 (510)
T 3ul1_B 312 VIDAGALAVFPSLLTN-----PKTNIQKEATWTMSNITAG-RQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNY 385 (510)
T ss_dssp HHHTTGGGGCC-CTTC-----SSHHHHHHHHHHHHHHTTS-CHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred HhhccchHHHHHHhcC-----CCHHHHHHHHHHHHHHHcC-cHHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 8888887777777763 2356888899999988764 456777888999999999999999999999999999887
Q ss_pred hcc--cccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhh-------cCHHHHHHHHhhCCcccccc
Q psy8417 215 LLD--DSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLS-------DNARAREALRQCLPDQLRDS 285 (326)
Q Consensus 215 L~d--d~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLs-------dn~rar~aL~~~LP~~Lrd~ 285 (326)
..+ ..-..|+++. .++..+ ..|.+.+++++.+.+..+...+. ++...+..+..|= .+ .
T Consensus 386 ~~~~~~~~~~~L~~~--------g~i~~L-~~LL~~~d~~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~g--gl--~ 452 (510)
T 3ul1_B 386 TSGGTVEQIVYLVHC--------GIIEPL-MNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECG--GL--D 452 (510)
T ss_dssp HHHCCHHHHHHHHHT--------TCHHHH-HHGGGCSCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTT--HH--H
T ss_pred HccCCHHHHHHHHHC--------CCHHHH-HHHhcCCCHHHHHHHHHHHHHHHHHhHhccchHHHHHHHHHcC--cH--H
Confidence 652 2223333221 122222 23445677777777666554432 3333333333220 00 0
Q ss_pred hhhhhh-cCCHHHHHHHHHHHHHhc
Q psy8417 286 TFSVCL-NDDKSTKNWLAQLIKNLE 309 (326)
Q Consensus 286 tf~~~l-~~D~~~k~wl~qLl~nl~ 309 (326)
....+. .++.++.+.-.+++.+-.
T Consensus 453 ~ie~Lq~~~n~~i~~~A~~iie~yf 477 (510)
T 3ul1_B 453 KIEALQRHENESVYKASLNLIEKYF 477 (510)
T ss_dssp HHHHGGGCSSHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHC
Confidence 112222 346677777777776543
No 20
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=92.82 E-value=3.6 Score=40.66 Aligned_cols=142 Identities=13% Similarity=0.126 Sum_probs=101.3
Q ss_pred HHHHHHHHHhhhchhhHHHHHhhcccccccccccccC-----------------CCCCccchhhhhhhhhhhhhccchHH
Q psy8417 116 CNALALLQCVASHQETRSLFLAAHIPLFLYPFLHTTS-----------------KTRPFEYLRLTSLGVIGALVKTDEQE 178 (326)
Q Consensus 116 CnaLaLLQcvAshpetR~~FL~A~iplyLyPfLntts-----------------k~r~fE~LRLtSLGVIgaLvK~dd~e 178 (326)
-.+...|..++.+++.+..++++++.-.|--.|+..+ .....|.++...++.++.|.+.. +
T Consensus 371 ~~a~~~L~nLa~~~~~~~~i~~~~~i~~Lv~lL~~~~~~vr~~a~~al~n~~~~~~~~~~~v~~~a~~aL~~La~~~--~ 448 (644)
T 2z6h_A 371 KATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDV--H 448 (644)
T ss_dssp HHHHHHHHHHTTSGGGHHHHHHTTHHHHHHHHHHHHHHHHTTC----------CCSSCHHHHHHHHHHHHHHHTTSH--H
T ss_pred HHHHHHHHHHccCHHHHHHHHHcCCHHHHHHHHhccchhhhhHhhhccccchhcccccHHHHHHHHHHHHHHHhcCH--H
Confidence 3667778899999999999988887666666665421 01135778888999999999743 5
Q ss_pred HHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHHhcccccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHH
Q psy8417 179 VITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVV 258 (326)
Q Consensus 179 vI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKIL~dd~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhII 258 (326)
.-..+.+...+|...+.+..+++--+..|...+.++..+..+ |...+..-. +. .+..+..++++.+-+...
T Consensus 449 ~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~l~~~~~~----~~~i~~~g~----l~-~L~~ll~~~~~~vr~~A~ 519 (644)
T 2z6h_A 449 NRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEA----AEAIEAEGA----TA-PLTELLHSRNEGVATYAA 519 (644)
T ss_dssp HHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSHHH----HHHHHHTTC----HH-HHHHHTTCSCHHHHHHHH
T ss_pred HHHHHHhCCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCHHH----HHHHHHcCC----hh-HHHHHHcCCCHHHHHHHH
Confidence 556666888999999999999888888899999887765433 222222111 12 344556778888888888
Q ss_pred HHHHHhhcCH
Q psy8417 259 RCYLRLSDNA 268 (326)
Q Consensus 259 rCYlRLsdn~ 268 (326)
.+-.+|+++.
T Consensus 520 ~aL~~l~~~~ 529 (644)
T 2z6h_A 520 AVLFRMSEDK 529 (644)
T ss_dssp HHHHHHTTTS
T ss_pred HHHHHHhccC
Confidence 8888888865
No 21
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=92.55 E-value=4 Score=39.44 Aligned_cols=220 Identities=11% Similarity=0.197 Sum_probs=130.2
Q ss_pred CcchHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHHhhh-chhhHHH
Q psy8417 56 IPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVAS-HQETRSL 134 (326)
Q Consensus 56 ~p~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQcvAs-hpetR~~ 134 (326)
+++.+.+|..-|+.--+..++....+ -..|.+..|++=+ ..+ ...-...++..|-.+++ +++.+..
T Consensus 264 ~~~v~~~a~~aL~~l~~~~~~~~~~v-~~~g~i~~Lv~lL-------~~~-----~~~v~~~a~~aL~nl~~~~~~~~~~ 330 (529)
T 3tpo_A 264 DPEVLADSCWAISYLTDGPNERIEMV-VKKGVVPQLVKLL-------GAT-----ELPIVTPALRAIGNIVTGTDEQTQK 330 (529)
T ss_dssp CHHHHHHHHHHHHHHHSSCHHHHHHH-HTTTCHHHHHHHH-------TCS-----CHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhhhhhhHHHH-HhccchHHHHHHh-------cCC-----ChhHHHHHHHHHHHHHccchHHHHH
Confidence 45557777766665544433333332 2346555554432 211 11223455666666665 4567778
Q ss_pred HHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHH
Q psy8417 135 FLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKI 214 (326)
Q Consensus 135 FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKI 214 (326)
++++...-.|..+|+.. -+.+|-...++++-+... +++.+..+.+..++|..++.+..++.-.|.-|...|..+
T Consensus 331 i~~~g~l~~L~~LL~~~-----~~~i~~~a~~aL~nl~~~-~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl 404 (529)
T 3tpo_A 331 VIDAGALAVFPSLLTNP-----KTNIQKEATWTMSNITAG-RQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNY 404 (529)
T ss_dssp HHHTTGGGGHHHHTTCS-----SHHHHHHHHHHHHHHHTS-CHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred HhhcccHHHHHHHHcCC-----CHHHHHHHHHHHHHHhcc-cHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 88888888888888643 356888888999888764 456777888999999999999999999999999998887
Q ss_pred hcc--cccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHh-------hcCHHHHHHHHhhC-Cccccc
Q psy8417 215 LLD--DSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRL-------SDNARAREALRQCL-PDQLRD 284 (326)
Q Consensus 215 L~d--d~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRL-------sdn~rar~aL~~~L-P~~Lrd 284 (326)
..+ .+...|++.. .++..++ .|...+++++..++..+-..+ .++...+..+..|= -+.
T Consensus 405 ~~~~~~~~~~~l~~~--------g~i~~L~-~LL~~~d~~i~~~~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~--- 472 (529)
T 3tpo_A 405 TSGGTVEQIVYLVHC--------GIIEPLM-NLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDK--- 472 (529)
T ss_dssp HHHSCHHHHHHHHHT--------TCHHHHH-HGGGCSCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTCHHH---
T ss_pred HcCCCHHHHHHHHHC--------cCHHHHH-HHhcCCCHHHHHHHHHHHHHHHHHhHhccChHHHHHHHHHCCcHHH---
Confidence 642 2233333221 1233333 344567777777766655443 23333444333320 111
Q ss_pred chhhhhh-cCCHHHHHHHHHHHHHh
Q psy8417 285 STFSVCL-NDDKSTKNWLAQLIKNL 308 (326)
Q Consensus 285 ~tf~~~l-~~D~~~k~wl~qLl~nl 308 (326)
...+. .++.++.+.=.+++.+-
T Consensus 473 --ie~Lq~~~n~~i~~~A~~iie~y 495 (529)
T 3tpo_A 473 --IEALQRHENESVYKASLNLIEKY 495 (529)
T ss_dssp --HTGGGGCSSHHHHHHHHHHHHHH
T ss_pred --HHHHHcCCCHHHHHHHHHHHHHH
Confidence 11111 34666666666666554
No 22
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=92.21 E-value=3.1 Score=42.82 Aligned_cols=143 Identities=10% Similarity=0.035 Sum_probs=90.7
Q ss_pred CcchHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHHhhhchhhHHHH
Q psy8417 56 IPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASHQETRSLF 135 (326)
Q Consensus 56 ~p~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQcvAshpetR~~F 135 (326)
+++.|++|+.-|.+--...+ --..+....|.+..|++-+.+- + ....|. +|...|..++.+++-+..+
T Consensus 163 d~~vr~~A~~~L~~L~~~~~-~~~~i~~~~~~i~~Lv~~L~~~------~----d~~vr~-~Aa~aL~~Ls~~~~~~~~i 230 (780)
T 2z6g_A 163 DQVVVNKAAVMVHQLSKKEA-SRHAIMRSPQMVSAIVRTMQNT------N----DVETAR-CTSGTLHNLSHHREGLLAI 230 (780)
T ss_dssp CHHHHHHHHHHHHHHHTSHH-HHHHHTTCHHHHHHHHHHHHHC------C----CHHHHH-HHHHHHHHHHTSHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCh-hHHHHHhccChHHHHHHHHcCC------C----CHHHHH-HHHHHHHHHhCCchhHHHH
Confidence 44556666555544322111 1224445566777666554321 0 112233 5555666689899888888
Q ss_pred HhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHHh
Q psy8417 136 LAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKIL 215 (326)
Q Consensus 136 L~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKIL 215 (326)
.++...-.|..+|... .+.+|..++++++.|...++ +.-..+.....+|..++.+..++.-.+.+|...+..+-
T Consensus 231 ~~~g~I~~Lv~lL~~~-----~~~v~~~A~~aL~nLa~~~~-~~~~~v~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La 304 (780)
T 2z6g_A 231 FKSGGIPALVNMLGSP-----VDSVLFHAITTLHNLLLHQE-GAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILA 304 (780)
T ss_dssp HHTTHHHHHHHHTTCS-----CHHHHHHHHHHHHHHHHHST-THHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHcCC-----CHHHHHHHHHHHHHHhCCCh-hhHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 8887666666677543 47789999999999987543 34556667889999999998877655666777776554
Q ss_pred c
Q psy8417 216 L 216 (326)
Q Consensus 216 ~ 216 (326)
.
T Consensus 305 ~ 305 (780)
T 2z6g_A 305 Y 305 (780)
T ss_dssp T
T ss_pred c
Confidence 3
No 23
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=91.27 E-value=1.6 Score=41.71 Aligned_cols=148 Identities=11% Similarity=0.080 Sum_probs=108.2
Q ss_pred HHHHHHHHHHhhhch-hhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhh
Q psy8417 115 VCNALALLQCVASHQ-ETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCL 193 (326)
Q Consensus 115 VCnaLaLLQcvAshp-etR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCL 193 (326)
.++|...|+-++.+. +.|..+.++...-.|-.+|+. +.+.++....+.++-|.+. +++.-..+.+...||..+
T Consensus 19 q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s-----~~~~~~~~A~~aL~nLa~~-~~~~k~~i~~~G~i~~Lv 92 (457)
T 1xm9_A 19 QAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRS-----PNQNVQQAAAGALRNLVFR-STTNKLETRRQNGIREAV 92 (457)
T ss_dssp HHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTS-----SCHHHHHHHHHHHHHHHSS-CHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcC-----CCHHHHHHHHHHHHHHhcC-CHHHHHHHHHcCCHHHHH
Confidence 457778888888654 678788888877677777763 3456788899999999884 345556677889999999
Q ss_pred hhhc-cccchhhHHHHHHHHHHhcccccchhhhcchhhhHHHHHHHHHHHHHHh-------hc--------CCchhHHHH
Q psy8417 194 RIME-SGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLE-------KD--------QSSRLLKHV 257 (326)
Q Consensus 194 riME-~GsElSKtvAtfIlqKIL~dd~GL~YiC~T~eRF~aV~~vL~~mV~~l~-------~~--------ps~RLLKhI 257 (326)
+.+. .+++-.|--|+..+..|-.++..-..+. + -++ ...|.-+. .. .++.++++.
T Consensus 93 ~lL~~~~~~~~~~~a~~aL~nLa~~~~~~~~i~----~-g~i----~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~~a 163 (457)
T 1xm9_A 93 SLLRRTGNAEIQKQLTGLLWNLSSTDELKEELI----A-DAL----PVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNA 163 (457)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHH----H-HHH----HHHHHHTTHHHHTCC---------CCCHHHHHHH
T ss_pred HHHhhCCCHHHHHHHHHHHHHHhcCHHhHHHHH----h-ccH----HHHHHHHhccccccccCccchhcccccHHHHHHH
Confidence 9998 8888888889999998887755443333 1 222 22222221 11 356789999
Q ss_pred HHHHHHhhcCHHHHHHHHhh
Q psy8417 258 VRCYLRLSDNARAREALRQC 277 (326)
Q Consensus 258 IrCYlRLsdn~rar~aL~~~ 277 (326)
.++-..||.++..|.++.++
T Consensus 164 ~~aL~nLs~~~~~~~~i~~~ 183 (457)
T 1xm9_A 164 TGCLRNLSSADAGRQTMRNY 183 (457)
T ss_dssp HHHHHHHTTSHHHHHHHTTS
T ss_pred HHHHHHHccCHHHHHHHHHc
Confidence 99999999999999988853
No 24
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=91.22 E-value=1.2 Score=43.88 Aligned_cols=155 Identities=14% Similarity=0.087 Sum_probs=109.6
Q ss_pred hhHHHHHHHHHHhhhchhhHHHHHhhccccccccccccc------CCCCCccchhhhhhhhhhhhhccchHHHHHHHHhh
Q psy8417 113 NRVCNALALLQCVASHQETRSLFLAAHIPLFLYPFLHTT------SKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTT 186 (326)
Q Consensus 113 nRVCnaLaLLQcvAshpetR~~FL~A~iplyLyPfLntt------sk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~T 186 (326)
...|+|+..|.-++.|++.|..++++...-.|-.+|... ........++-....++.-|...++..-..+.-..
T Consensus 163 ~~~~qAv~aL~nls~~~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~l~~~Aa~aL~nLa~~~~~~k~~i~~~~ 242 (458)
T 3nmz_A 163 HQICPAVCVLMKLSFDEEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMK 242 (458)
T ss_dssp TTTHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHhhhhcccccccCCCCHHHHHHHHHHHHHHhCCCcccHHHHHHcC
Confidence 467999999999999999999999999888888888521 11112344666777888888877663222222345
Q ss_pred chhhhhhhhhccccchhhHHHHHHHHHHhcccccchhhhcchhhhHHHH--HHHHHHHHHHhhcCCchhHHHHHHHHHHh
Q psy8417 187 EIIPLCLRIMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVA--MILGKMVISLEKDQSSRLLKHVVRCYLRL 264 (326)
Q Consensus 187 EIiPLCLriME~GsElSKtvAtfIlqKIL~dd~GL~YiC~T~eRF~aV~--~vL~~mV~~l~~~ps~RLLKhIIrCYlRL 264 (326)
..||..++.+..+++-.|.-|...+..+=..+ ..+.-.+|. ..+..+|.-|....++.+.+...++-..|
T Consensus 243 GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~--------~~~~k~~I~~~GaI~~LV~lLl~s~~~~v~~~A~~aL~nL 314 (458)
T 3nmz_A 243 GCMRALVAQLKSESEDLQQVIASVLRNLSWRA--------DVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNL 314 (458)
T ss_dssp HHHHHHHHGGGCSCHHHHHHHHHHHHHHTSSC--------CHHHHHHHHHTTHHHHHHHHHTTCCSHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCC--------CHHHHHHHHHcCCHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 67999999999999999999998887764311 011112222 34566666666777889999999999999
Q ss_pred hc-CHHHHHHHH
Q psy8417 265 SD-NARAREALR 275 (326)
Q Consensus 265 sd-n~rar~aL~ 275 (326)
|. +...+..+.
T Consensus 315 s~~~~~nk~~I~ 326 (458)
T 3nmz_A 315 SAHCTENKADIC 326 (458)
T ss_dssp HHHCHHHHHHHH
T ss_pred ccCCHHHHHHHH
Confidence 88 666565554
No 25
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=89.28 E-value=4.5 Score=37.30 Aligned_cols=144 Identities=15% Similarity=0.124 Sum_probs=99.4
Q ss_pred CcchHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHHhh-hchhhHHH
Q psy8417 56 IPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVA-SHQETRSL 134 (326)
Q Consensus 56 ~p~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQcvA-shpetR~~ 134 (326)
+++-|+.|..-|+.--...|...-. --..|.+..|++=+.+- ++ .+-|. +|+--|-+++ .+++-...
T Consensus 95 ~~~vr~~Aa~~Lg~ia~~n~~~~~~-vv~~g~l~~Ll~LL~~~------~~----~~v~~-~A~~ALsnl~~~~~~~~~~ 162 (296)
T 1xqr_A 95 AAGLRWRAAQLIGTCSQNVAAIQEQ-VLGLGALRKLLRLLDRD------AC----DTVRV-KALFAISCLVREQEAGLLQ 162 (296)
T ss_dssp SHHHHHHHHHHHHHHHTTCHHHHHH-HHHTTHHHHHHHHHHHC------SC----HHHHH-HHHHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCCHHHHHH-HHHCCCHHHHHHHHccC------CC----HHHHH-HHHHHHHHHHcCCcHHHHH
Confidence 3455777777776654433332222 22447777777554431 11 12232 3333334555 66777888
Q ss_pred HHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHH
Q psy8417 135 FLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKI 214 (326)
Q Consensus 135 FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKI 214 (326)
|+++...-.|-..|+. +-..+|--+...++.|... +++.+.++.+...+|.....+..++.-.+..|...|..|
T Consensus 163 ~~~~ggi~~L~~lL~~-----~d~~v~~~A~~aLs~L~~~-~~~~~~~vv~~g~i~~Lv~LL~~~d~~v~~~al~aL~~l 236 (296)
T 1xqr_A 163 FLRLDGFSVLMRAMQQ-----QVQKLKVKSAFLLQNLLVG-HPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSL 236 (296)
T ss_dssp HHHTTHHHHHHHHHHS-----SCHHHHHHHHHHHHHHHHH-CGGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHcC-----CCHHHHHHHHHHHHHHHhC-ChHHHHHHHHcCCHHHHHHHHcCCChhHHHHHHHHHHHH
Confidence 9998876677777763 2456788899999999886 677888999999999999999999999999999999999
Q ss_pred hcc
Q psy8417 215 LLD 217 (326)
Q Consensus 215 L~d 217 (326)
+.+
T Consensus 237 ~~~ 239 (296)
T 1xqr_A 237 VTD 239 (296)
T ss_dssp HTT
T ss_pred HhC
Confidence 876
No 26
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=88.41 E-value=9.9 Score=39.09 Aligned_cols=142 Identities=14% Similarity=0.114 Sum_probs=94.9
Q ss_pred HHHHHHHHHhhhchhhHHHHHhhcccccccccccccC-----------------CCCCccchhhhhhhhhhhhhccchHH
Q psy8417 116 CNALALLQCVASHQETRSLFLAAHIPLFLYPFLHTTS-----------------KTRPFEYLRLTSLGVIGALVKTDEQE 178 (326)
Q Consensus 116 CnaLaLLQcvAshpetR~~FL~A~iplyLyPfLntts-----------------k~r~fE~LRLtSLGVIgaLvK~dd~e 178 (326)
-.+...|--++.+++.+..++++++.-.|--.|...+ .....|.+|...+|.++.|.. +++
T Consensus 507 ~~A~~aL~nLa~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~aa~al~nq~~~~~~~~~~v~~~a~~aL~~La~--~~~ 584 (780)
T 2z6g_A 507 KATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEACTGALHILAR--DIH 584 (780)
T ss_dssp HHHHHHHHHHHSSHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTC------CCSTTCCHHHHHHHHHHHHHHHTT--SHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHCCCHHHHHHHHHhcchhHHHHHhhccccchhhcccChHHHHHHHHHHHHHHhc--Chh
Confidence 3555566677888988888887775444444443211 111246688888999998875 345
Q ss_pred HHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHHhcccccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHH
Q psy8417 179 VITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVV 258 (326)
Q Consensus 179 vI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKIL~dd~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhII 258 (326)
....+.....||.....+..+++-.+..|...+..+..+..+-..+.+ - ..+. .+..+..++++.+-+...
T Consensus 585 ~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~~~~~~i~~----~----g~i~-~L~~Ll~~~~~~Vr~~A~ 655 (780)
T 2z6g_A 585 NRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEA----E----GATA-PLTELLHSRNEGVATYAA 655 (780)
T ss_dssp HHHHHHHTCCHHHHHHGGGCSCHHHHHHHHHHHHHHHTSHHHHHHHHH----T----TCHH-HHHHGGGCSCHHHHHHHH
T ss_pred hHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCHHHHHHHHH----C----CCHH-HHHHHHcCCCHHHHHHHH
Confidence 555666788999999999999999999999998888755432211111 0 0111 233456678888888888
Q ss_pred HHHHHhhcCH
Q psy8417 259 RCYLRLSDNA 268 (326)
Q Consensus 259 rCYlRLsdn~ 268 (326)
.+-.+++++.
T Consensus 656 ~aL~~l~~~~ 665 (780)
T 2z6g_A 656 AVLFRMSEDK 665 (780)
T ss_dssp HHHHHHHTTS
T ss_pred HHHHHHHcCC
Confidence 8888888866
No 27
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=88.23 E-value=3 Score=39.37 Aligned_cols=144 Identities=17% Similarity=0.154 Sum_probs=97.9
Q ss_pred CcchHHH---HHHHHHh-hcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHHhhh----
Q psy8417 56 IPETREN---ALLELSK-KREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVAS---- 127 (326)
Q Consensus 56 ~p~~Re~---AL~eLsk-~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQcvAs---- 127 (326)
+++.+++ ||..||. .++. ...+-..-|.+..|++=+.+-.+. +++ .-+-++.+.|-.+++
T Consensus 184 ~~~~~~~A~~aL~nLs~~~~~n----k~~i~~~~Gai~~Lv~lL~~~~~~---~~~-----~v~~~A~~aL~nLs~~~a~ 251 (354)
T 3nmw_A 184 KESTLKSVLSALWNLSAHCTEN----KADICAVDGALAFLVGTLTYRSQT---NTL-----AIIESGGGILRNVSSLIAT 251 (354)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHH----HHHHHHSTTHHHHHHHHTTCCCSS---SCC-----HHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHccChhh----hHHHHHhcCcHHHHHHHhccCCCc---ccH-----HHHHHHHHHHHHHHhhccC
Confidence 4555664 5566665 2222 233443567777766554321110 000 123456666677775
Q ss_pred chhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHH
Q psy8417 128 HQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVA 207 (326)
Q Consensus 128 hpetR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvA 207 (326)
+++.|..++++...-.|--.|...+ +.++--..++++.|... +++-...+.+...||.....++.+++-.|..|
T Consensus 252 ~~~~~~~i~~~g~i~~Lv~lL~~~~-----~~v~~~A~~aL~nLa~~-~~~~~~~i~~~G~i~~Lv~LL~s~~~~i~~~A 325 (354)
T 3nmw_A 252 NEDHRQILRENNCLQTLLQHLKSHS-----LTIVSNACGTLWNLSAR-NPKDQEALWDMGAVSMLKNLIHSKHKMIAMGS 325 (354)
T ss_dssp CHHHHHHHHTTTHHHHHHHHTTCSC-----HHHHHHHHHHHHHHTSS-CHHHHHHHHHTTHHHHHHTTTTCSSHHHHHHH
T ss_pred CHHHHHHHHHcCCHHHHHHHHcCCC-----hHHHHHHHHHHHHHhCC-CHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHH
Confidence 8999999999987666666666432 34777788999988753 56677888999999999999999999999999
Q ss_pred HHHHHHHhcc
Q psy8417 208 TFILQKILLD 217 (326)
Q Consensus 208 tfIlqKIL~d 217 (326)
...+..+..+
T Consensus 326 ~~aL~nL~~~ 335 (354)
T 3nmw_A 326 AAALRNLMAN 335 (354)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 9999998876
No 28
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=87.02 E-value=17 Score=32.79 Aligned_cols=216 Identities=14% Similarity=0.074 Sum_probs=113.5
Q ss_pred HHHHHHHhCCcc--hHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHH
Q psy8417 47 IYQWILELSIPE--TRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQC 124 (326)
Q Consensus 47 v~q~I~~L~~p~--~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQc 124 (326)
+.+++..+.+|+ .|..|-..|-+-.++ +.+|....|++-+.+. +....-|-..++.|=..
T Consensus 3 l~~~L~~~~s~d~~~r~~Ae~~L~~~~~~---------~~~~~~~~L~~il~~~---------~~~~~vR~~a~~~Lk~~ 64 (462)
T 1ibr_B 3 LITILEKTVSPDRLELEAAQKFLERAAVE---------NLPTFLVELSRVLANP---------GNSQVARVAAGLQIKNS 64 (462)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHCT---------TSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHhh---------ChHHHHHHHHHHHHcC---------CCChHHHHHHHHHHHHh
Confidence 567888888775 476666665443221 1234444555544321 11233465555555555
Q ss_pred hhhc----------------hhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhch
Q psy8417 125 VASH----------------QETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEI 188 (326)
Q Consensus 125 vAsh----------------petR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEI 188 (326)
+..+ ++.| ..++.. |.+.|... -+.+ -..-.+|+.+.+.+.++- -..|+
T Consensus 65 i~~~~~~~~~~~~~~~~~l~~~~~-~~ik~~----ll~~l~~~-----~~~v-~~~~~~i~~ia~~~~~~~----~w~~l 129 (462)
T 1ibr_B 65 LTSKDPDIKAQYQQRWLAIDANAR-REVKNY----VLQTLGTE-----TYRP-SSASQCVAGIACAEIPVN----QWPEL 129 (462)
T ss_dssp HCCSSHHHHHHHHHHHHTSCHHHH-HHHHHH----HHHHTTCC-----CSSS-CSHHHHHHHHHHHHGGGT----CCTTH
T ss_pred ccccchHHHHHHHhhhhcCCHHHH-HHHHHH----HHHHhCCC-----Cchh-hHHHHHHHHHHHHhcccc----ccHHH
Confidence 4332 1221 223332 33334322 1334 344456677777653320 24678
Q ss_pred hhhhhhhhccc--cchhhHHHHHHHHHHhcccccchhhhcchhhhHHHHHHHHHHHHHHhhc-CCchhHHHHHHHHHHhh
Q psy8417 189 IPLCLRIMESG--SELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLEKD-QSSRLLKHVVRCYLRLS 265 (326)
Q Consensus 189 iPLCLriME~G--sElSKtvAtfIlqKIL~dd~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~-ps~RLLKhIIrCYlRLs 265 (326)
+|..+..+..+ +.-.|-.|..++.++..+-.|-. .+.+ +..++..++..+..+ +++.+-+..++|+..+.
T Consensus 130 l~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~-----~~~~--~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~ 202 (462)
T 1ibr_B 130 IPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQ-----LQDK--SNEILTAIIQGMRKEEPSNNVKLAATNALLNSL 202 (462)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGG-----TGGG--HHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCchh-----hHhH--HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 88888888888 77788889999888876532210 1111 123444444444433 27788888888887654
Q ss_pred cCHH-------HHHHHHhhCCcccccchhhhhhcCCHHHHHHHHHHHHHhcc
Q psy8417 266 DNAR-------AREALRQCLPDQLRDSTFSVCLNDDKSTKNWLAQLIKNLES 310 (326)
Q Consensus 266 dn~r-------ar~aL~~~LP~~Lrd~tf~~~l~~D~~~k~wl~qLl~nl~~ 310 (326)
+.-+ .++.+-+.+++. .-.+|+.++++..+.+..+..
T Consensus 203 ~~~~~~~~~~~~~~~l~~~l~~~--------~~~~~~~vr~~~~~~l~~l~~ 246 (462)
T 1ibr_B 203 EFTKANFDKESERHFIMQVVCEA--------TQCPDTRVRVAALQNLVKIMS 246 (462)
T ss_dssp TTTHHHHTSHHHHHHHHHHHHHH--------TTCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhhHHHHHHHHHHHHh--------cCCCCHHHHHHHHHHHHHHHH
Confidence 3110 111112222211 123588889888888887764
No 29
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=87.02 E-value=4.3 Score=38.79 Aligned_cols=158 Identities=10% Similarity=0.086 Sum_probs=97.3
Q ss_pred HHHHHHHhCCcchHHHHHHHHHhhcccCCChhhHh----hhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHH
Q psy8417 47 IYQWILELSIPETRENALLELSKKREVVPDLAPML----WHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALL 122 (326)
Q Consensus 47 v~q~I~~L~~p~~Re~AL~eLsk~re~~~dLa~~L----W~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLL 122 (326)
+.+++.+-.+++.+|.|..-|+.--..-.+-...+ =..-|.+..|++= |..+ ...-..+|..+|
T Consensus 288 L~~lL~~~~~~~~~e~a~~aL~nl~~~~~~~~~~~~~~~v~~~~~l~~Lv~L-------L~~~-----~~~v~~~A~~aL 355 (457)
T 1xm9_A 288 YLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARL-------LQSG-----NSDVVRSGASLL 355 (457)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHTTCSSSHHHHHHHHHHTTSCCHHHHHHH-------TTCS-----CHHHHHHHHHHH
T ss_pred HHHHHhhcCCHHHHHHHHHHHHHhccCcCcchHHHHHHHHHHcCCchHHHHH-------HhCC-----CHhHHHHHHHHH
Confidence 34455544578888887777665432111211111 1123444443331 2222 223446777888
Q ss_pred HHhhhchhhHHHHHhhcccccccccccccCCC-CCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccc-c
Q psy8417 123 QCVASHQETRSLFLAAHIPLFLYPFLHTTSKT-RPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESG-S 200 (326)
Q Consensus 123 QcvAshpetR~~FL~A~iplyLyPfLnttsk~-r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~G-s 200 (326)
.-++.|++.+...-+.-||- |--.|...+.. ..-+..-...+++++-+++.++ +....+.+...+|...++..++ +
T Consensus 356 ~nls~~~~~~~~i~~~~i~~-Lv~lL~~~~~~~~~~~~v~~~~l~~l~ni~~~~~-~~~~~i~~~g~l~~L~~L~~~~~~ 433 (457)
T 1xm9_A 356 SNMSRHPLLHRVMGNQVFPE-VTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP-QLAKQYFSSSMLNNIINLCRSSAS 433 (457)
T ss_dssp HHHHTSGGGHHHHHHHTHHH-HHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTTCT-HHHHHHCCHHHHHHHHHHHHCTTC
T ss_pred HHHhcCHHHHHHHHHhhhHH-HHHhccCCCCCCCCcHHHHHHHHHHHHHHHhcCH-HHHHHHHHcCCHHHHHHHHcCCCc
Confidence 88899998876544433332 33344443221 2223455688999999998654 5677888999999999999999 8
Q ss_pred chhhHHHHHHHHHHhccc
Q psy8417 201 ELSKTVATFILQKILLDD 218 (326)
Q Consensus 201 ElSKtvAtfIlqKIL~dd 218 (326)
+-.+..|.-+++.+..+.
T Consensus 434 ~~i~~~A~~~L~~~~~~~ 451 (457)
T 1xm9_A 434 PKAAEAARLLLSDMWSSK 451 (457)
T ss_dssp HHHHHHHHHHHHTTSSST
T ss_pred HHHHHHHHHHHHHHHcch
Confidence 888889999998877554
No 30
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=85.64 E-value=9.8 Score=38.59 Aligned_cols=228 Identities=17% Similarity=0.207 Sum_probs=125.6
Q ss_pred hhhHHHHHHHHHHhCCc--chHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHH
Q psy8417 41 PVEREKIYQWILELSIP--ETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNA 118 (326)
Q Consensus 41 ~~d~~~v~q~I~~L~~p--~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCna 118 (326)
..+.+++.+++.+..+| +.|..|-..|-.- +..|+....| ..|... ++ +....-|-..+
T Consensus 9 ~~~~~~l~~~l~~~~s~d~~~r~~Ae~~L~~~-~~~p~~~~~l-----------~~il~~---~~----~~~~~vR~~a~ 69 (852)
T 4fdd_A 9 EQGLQQILQLLKESQSPDTTIQRTVQQKLEQL-NQYPDFNNYL-----------IFVLTK---LK----SEDEPTRSLSG 69 (852)
T ss_dssp HHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHH-TTSHHHHHHH-----------HHHHHT---CT----TSCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhCcCHHHHHHHHHHHHHH-HhCCCHHHHH-----------HHHHhc---cC----CCChHHHHHHH
Confidence 34566788999988866 5688888887543 2223322222 222221 11 12335577777
Q ss_pred HHHHHHhhhc-----hhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhh
Q psy8417 119 LALLQCVASH-----QETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCL 193 (326)
Q Consensus 119 LaLLQcvAsh-----petR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCL 193 (326)
+.|=..|..| ++.| ..++..+.-. |. .+-..+|-..--+|+.+++.|.++ -+.|++|...
T Consensus 70 ~~Lkn~i~~~w~~~~~~~~-~~ik~~ll~~----l~-----~~~~~vr~~~a~~i~~ia~~~~~~-----~wp~ll~~L~ 134 (852)
T 4fdd_A 70 LILKNNVKAHFQNFPNGVT-DFIKSECLNN----IG-----DSSPLIRATVGILITTIASKGELQ-----NWPDLLPKLC 134 (852)
T ss_dssp HHHHHHTTTSGGGCCHHHH-HHHHHHHHTT----TT-----CSSHHHHHHHHHHHHHHHHHTTTT-----TCTTHHHHHH
T ss_pred HHHHHHHHHccCCCCHHHH-HHHHHHHHHH----Hc-----CCCHHHHHHHHHHHHHHHHhcCcc-----ccHHHHHHHH
Confidence 7777777653 3333 4566555443 22 233578999999999999976432 2467888888
Q ss_pred hhhccccchhhHHHHHHHHHHhcccccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhcCHHHHHH
Q psy8417 194 RIMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREA 273 (326)
Q Consensus 194 riME~GsElSKtvAtfIlqKIL~dd~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsdn~rar~a 273 (326)
..+..++.-.|-.|..++.+|..+....- --+...+ .+..++..++. +..++++.+-...++|...+..... +.
T Consensus 135 ~~l~~~~~~~r~~al~~L~~i~~~~~~~~-~~~~~~~--~~~~il~~l~~-~l~~~~~~vR~~A~~aL~~~~~~~~--~~ 208 (852)
T 4fdd_A 135 SLLDSEDYNTCEGAFGALQKICEDSAEIL-DSDVLDR--PLNIMIPKFLQ-FFKHSSPKIRSHAVACVNQFIISRT--QA 208 (852)
T ss_dssp HHHSCSSHHHHHHHHHHHHHHHHHHTTHH-HHCSSSS--CHHHHHHHHTT-TTTCSSHHHHHHHHHHHHTTTTTTC--HH
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHhHHHh-chhhhcc--hHHHHHHHHHH-HhcCCCHHHHHHHHHHHHHHHhccc--HH
Confidence 89999888889999999888775432210 0000000 02223333333 3346777777777777765543210 11
Q ss_pred HHhhCCcccccchhhhhhcCCHHHHHHHHHHHHHhc
Q psy8417 274 LRQCLPDQLRDSTFSVCLNDDKSTKNWLAQLIKNLE 309 (326)
Q Consensus 274 L~~~LP~~Lrd~tf~~~l~~D~~~k~wl~qLl~nl~ 309 (326)
+...+|+.+ ..-|..+-.+|+.++++.-+.+.++.
T Consensus 209 ~~~~~~~~l-~~l~~~~~d~~~~vr~~a~~~L~~l~ 243 (852)
T 4fdd_A 209 LMLHIDSFI-ENLFALAGDEEPEVRKNVCRALVMLL 243 (852)
T ss_dssp HHTSHHHHH-HHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 211121111 11111112346777776666665553
No 31
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=85.42 E-value=26 Score=33.70 Aligned_cols=172 Identities=12% Similarity=0.118 Sum_probs=110.5
Q ss_pred HHHHHHHHHHhhhchhh-HHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhh
Q psy8417 115 VCNALALLQCVASHQET-RSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCL 193 (326)
Q Consensus 115 VCnaLaLLQcvAshpet-R~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCL 193 (326)
..++...|-.++.+++- +..+.++.+.-.|..+|... -+.++...+..+|.++..++ +....+++...+|...
T Consensus 249 ~~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~-----~~~v~~~al~aL~nl~~~~~-~~~~~i~~~g~l~~L~ 322 (510)
T 3ul1_B 249 LADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGAT-----ELPIVTPALRAIGNIVTGTD-EQTQKVIDAGALAVFP 322 (510)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCS-----CHHHHHHHHHHHHHHTTSCH-HHHHHHHHTTGGGGCC
T ss_pred HHHHHHHHHHHhhchhhhHHHHHhcccchhhhhhhcCC-----ChhhhhHHHHHHHHhhcCCH-HHHHHHhhccchHHHH
Confidence 34555666677776654 45567788877788888643 34678889999999998665 4456777889999999
Q ss_pred hhhccccchhhHHHHHHHHHHhcccccchhhhcchhhhHHHH--HHHHHHHHHHhhcCCchhHHHHHHHHHHhhc--CHH
Q psy8417 194 RIMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVA--MILGKMVISLEKDQSSRLLKHVVRCYLRLSD--NAR 269 (326)
Q Consensus 194 riME~GsElSKtvAtfIlqKIL~dd~GL~YiC~T~eRF~aV~--~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsd--n~r 269 (326)
+.+..+++--|.-|..++..|.... .+....|. .++..++. +....+.++-+....+-..|+. ++.
T Consensus 323 ~LL~~~~~~v~~~A~~aL~nl~a~~---------~~~~~~v~~~g~i~~Lv~-lL~~~~~~v~~~Aa~aL~Nl~~~~~~~ 392 (510)
T 3ul1_B 323 SLLTNPKTNIQKEATWTMSNITAGR---------QDQIQQVVNHGLVPFLVG-VLSKADFKTQKEAAWAITNYTSGGTVE 392 (510)
T ss_dssp -CTTCSSHHHHHHHHHHHHHHTTSC---------HHHHHHHHHTTHHHHHHH-HHHSSCHHHHHHHHHHHHHHHHHCCHH
T ss_pred HHhcCCCHHHHHHHHHHHHHHHcCc---------HHHHHHHHhcCCHHHHHH-HHcCCCHHHHHHHHHHHHHHHccCCHH
Confidence 9999999988999999998876432 22233332 23444443 3456688888888888777765 454
Q ss_pred HHHHHHh--hCCcccccchhhhhhc-CCHHHHHHHHHHHHHh
Q psy8417 270 AREALRQ--CLPDQLRDSTFSVCLN-DDKSTKNWLAQLIKNL 308 (326)
Q Consensus 270 ar~aL~~--~LP~~Lrd~tf~~~l~-~D~~~k~wl~qLl~nl 308 (326)
-+..|.+ ++|. +.++|+ .|+.+.....+.+.|+
T Consensus 393 ~~~~L~~~g~i~~------L~~LL~~~d~~i~~~~L~aL~ni 428 (510)
T 3ul1_B 393 QIVYLVHCGIIEP------LMNLLSAKDTKIIQVILDAISNI 428 (510)
T ss_dssp HHHHHHHTTCHHH------HHHGGGCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHH------HHHHhcCCCHHHHHHHHHHHHHH
Confidence 4444443 2221 222332 3666655555555554
No 32
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=82.94 E-value=7.7 Score=34.87 Aligned_cols=150 Identities=19% Similarity=0.234 Sum_probs=101.5
Q ss_pred hhHHHHHHHHHHhhh-chhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhh
Q psy8417 113 NRVCNALALLQCVAS-HQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPL 191 (326)
Q Consensus 113 nRVCnaLaLLQcvAs-hpetR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPL 191 (326)
...+++.+-+|-++. +++.|....++.-.-.|--+|.. +.+.++-...+.++-|.+.++ +--..+....-||.
T Consensus 25 ~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s-----~~~~vq~~Aa~aL~nLa~~~~-~nk~~I~~~GaI~~ 98 (233)
T 3tt9_A 25 SRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKV-----QNEDVQRAVCGALRNLVFEDN-DNKLEVAELNGVPR 98 (233)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGC-----CCHHHHHHHHHHHHHHHTTCH-HHHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcC-----CCHHHHHHHHHHHHHHHhCCH-HHHHHHHHcCCHHH
Confidence 345677788899984 67899999888866666667754 347788889999999988433 34445667889999
Q ss_pred hhhhhc-cccchhhHHHHHHHHHHhcccccchhhhcchhhhHHHHHHHHHHHHHH-------hh-c-------CCchhHH
Q psy8417 192 CLRIME-SGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISL-------EK-D-------QSSRLLK 255 (326)
Q Consensus 192 CLriME-~GsElSKtvAtfIlqKIL~dd~GL~YiC~T~eRF~aV~~vL~~mV~~l-------~~-~-------ps~RLLK 255 (326)
.++.+. .+++-.|--|+-.+..+=..+..-.-+ +...+...+.-+ .. + .++.++.
T Consensus 99 Lv~lL~~~~~~~~~e~a~~aL~nLS~~~~~k~~i---------~~~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~v~~ 169 (233)
T 3tt9_A 99 LLQVLKQTRDLETKKQITGLLWNLSSNDKLKNLM---------ITEALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFY 169 (233)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHTSGGGHHHH---------HHHHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHH
T ss_pred HHHHHccCCCHHHHHHHHHHHHHHHcChhhHHHH---------HhccHHHHHHHHhccccCCcccccccccccchHHHHH
Confidence 999997 466666666776666654444332111 111122222111 00 1 2558999
Q ss_pred HHHHHHHHhhc-CHHHHHHHHhh
Q psy8417 256 HVVRCYLRLSD-NARAREALRQC 277 (326)
Q Consensus 256 hIIrCYlRLsd-n~rar~aL~~~ 277 (326)
+...|---||- ++.+|.++++|
T Consensus 170 na~~~L~nLss~~~~~R~~~r~~ 192 (233)
T 3tt9_A 170 NVTGCLRNMSSAGADGRKAMRRC 192 (233)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHTS
T ss_pred HHHHHHHHHhcCCHHHHHHHHHC
Confidence 99999999975 88999999986
No 33
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=81.77 E-value=38 Score=32.54 Aligned_cols=171 Identities=12% Similarity=0.115 Sum_probs=110.0
Q ss_pred HHHHHHHHHhhhch-hhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhh
Q psy8417 116 CNALALLQCVASHQ-ETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLR 194 (326)
Q Consensus 116 CnaLaLLQcvAshp-etR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLr 194 (326)
.++...|-.++.++ +.+..++.+.+.-.|..+|... -+.++...+..+|.++..++ +....++....+|...+
T Consensus 269 ~~a~~aL~~l~~~~~~~~~~v~~~g~i~~Lv~lL~~~-----~~~v~~~a~~aL~nl~~~~~-~~~~~i~~~g~l~~L~~ 342 (529)
T 3tpo_A 269 ADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGAT-----ELPIVTPALRAIGNIVTGTD-EQTQKVIDAGALAVFPS 342 (529)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHTTTCHHHHHHHHTCS-----CHHHHHHHHHHHHHHTTSCH-HHHHHHHHTTGGGGHHH
T ss_pred HHHHHHHHHhhhhhhhhHHHHHhccchHHHHHHhcCC-----ChhHHHHHHHHHHHHHccch-HHHHHHhhcccHHHHHH
Confidence 34555555666665 4455667888877788887643 45688889999999998665 44557788899999999
Q ss_pred hhccccchhhHHHHHHHHHHhcccccchhhhcchhhhHHHH--HHHHHHHHHHhhcCCchhHHHHHHHHHHhhc--CHHH
Q psy8417 195 IMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVA--MILGKMVISLEKDQSSRLLKHVVRCYLRLSD--NARA 270 (326)
Q Consensus 195 iME~GsElSKtvAtfIlqKIL~dd~GL~YiC~T~eRF~aV~--~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsd--n~ra 270 (326)
.+..+++-.|.-|..++..|-.+. .+....+. .++..++. +....+..+-+....+-..|+. ++.-
T Consensus 343 LL~~~~~~i~~~a~~aL~nl~~~~---------~~~~~~v~~~g~i~~Lv~-lL~~~~~~v~~~A~~aL~nl~~~~~~~~ 412 (529)
T 3tpo_A 343 LLTNPKTNIQKEATWTMSNITAGR---------QDQIQQVVNHGLVPFLVG-VLSKADFKTQKAAAWAITNYTSGGTVEQ 412 (529)
T ss_dssp HTTCSSHHHHHHHHHHHHHHHTSC---------HHHHHHHHHTTHHHHHHH-HHHSSCHHHHHHHHHHHHHHHHHSCHHH
T ss_pred HHcCCCHHHHHHHHHHHHHHhccc---------HHHHHHHHhcCcHHHHHH-HhcCCCHHHHHHHHHHHHHHHcCCCHHH
Confidence 999999988889999988876432 22222221 23333333 3456688888888888777764 4444
Q ss_pred HHHHHh--hCCcccccchhhhhh-cCCHHHHHHHHHHHHHh
Q psy8417 271 REALRQ--CLPDQLRDSTFSVCL-NDDKSTKNWLAQLIKNL 308 (326)
Q Consensus 271 r~aL~~--~LP~~Lrd~tf~~~l-~~D~~~k~wl~qLl~nl 308 (326)
+..|.+ ++|. +..+| ..|+.+......-+.|+
T Consensus 413 ~~~l~~~g~i~~------L~~LL~~~d~~i~~~~L~aL~ni 447 (529)
T 3tpo_A 413 IVYLVHCGIIEP------LMNLLSAKDTKIIQVILDAISNI 447 (529)
T ss_dssp HHHHHHTTCHHH------HHHGGGCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHCcCHHH------HHHHhcCCCHHHHHHHHHHHHHH
Confidence 444433 2222 22233 23666665555555554
No 34
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=81.34 E-value=45 Score=33.12 Aligned_cols=140 Identities=14% Similarity=0.151 Sum_probs=84.0
Q ss_pred HHHHHHHhCC--cchHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHH
Q psy8417 47 IYQWILELSI--PETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQC 124 (326)
Q Consensus 47 v~q~I~~L~~--p~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQc 124 (326)
+..+..||.+ +-.|..|+.-|++.+. +++++ .+++.|...- . +.+..-|=..++++...
T Consensus 109 in~l~kDL~~~n~~vr~lAL~~L~~i~~--~~~~~----------~l~~~l~~~L---~----~~~~~VRk~A~~al~~l 169 (618)
T 1w63_A 109 TNCIKNDLNHSTQFVQGLALCTLGCMGS--SEMCR----------DLAGEVEKLL---K----TSNSYLRKKAALCAVHV 169 (618)
T ss_dssp HHHHHHHHSCSSSHHHHHHHHHHHHHCC--HHHHH----------HHHHHHHHHH---H----SCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCHhHHHHHHHHHHhcCC--HHHHH----------HHHHHHHHHH---c----CCCHHHHHHHHHHHHHH
Confidence 4456667764 4558888888888874 33332 2333332221 1 12345577788888888
Q ss_pred hhhchhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhcc------
Q psy8417 125 VASHQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMES------ 198 (326)
Q Consensus 125 vAshpetR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~------ 198 (326)
...+|+.-..| --.|...|+ .+...++.+.+..++.+.+. +++....+. .++|..++++..
T Consensus 170 ~~~~p~~v~~~-----~~~l~~lL~-----D~d~~V~~~Al~~L~~i~~~-~~~~~~~~~--~~v~~l~~~L~~~~~~~~ 236 (618)
T 1w63_A 170 IRKVPELMEMF-----LPATKNLLN-----EKNHGVLHTSVVLLTEMCER-SPDMLAHFR--KLVPQLVRILKNLIMSGY 236 (618)
T ss_dssp HHHCGGGGGGG-----GGGTTTSTT-----CCCHHHHHHHHHHHHHHCCS-HHHHHHHHH--TTHHHHHHHHHHHHHSCC
T ss_pred HHHChHHHHHH-----HHHHHHHhC-----CCCHhHHHHHHHHHHHHHHh-ChHHHHHHH--HHHHHHHHHHHHHHcCCC
Confidence 77788765432 223344443 22356778888888887764 555544443 578877766542
Q ss_pred ---------ccchhhHHHHHHHHHHhccc
Q psy8417 199 ---------GSELSKTVATFILQKILLDD 218 (326)
Q Consensus 199 ---------GsElSKtvAtfIlqKIL~dd 218 (326)
.++..+.....++.++-..|
T Consensus 237 ~~~~~~~~~~~~~~q~~il~~L~~l~~~~ 265 (618)
T 1w63_A 237 SPEHDVSGISDPFLQVRILRLLRILGRND 265 (618)
T ss_dssp CTTTCSSSSSCHHHHHHHHHHHHHHTTTC
T ss_pred CccccccCCCCChHHHHHHHHHHHhCCCC
Confidence 36777777777777765544
No 35
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=79.97 E-value=7 Score=38.44 Aligned_cols=100 Identities=12% Similarity=0.167 Sum_probs=77.3
Q ss_pred HHHHHHHHhh----hchhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhh
Q psy8417 117 NALALLQCVA----SHQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLC 192 (326)
Q Consensus 117 naLaLLQcvA----shpetR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLC 192 (326)
++.+.|-.++ .+++.|..++++...-.|--.|...+ +..+--..++++.|... +++...++.+...||..
T Consensus 353 ~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~~-----~~v~~~A~~aL~nLa~~-~~~~~~~i~~~G~I~~L 426 (458)
T 3nmz_A 353 SGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHS-----LTIVSNACGTLWNLSAR-NPKDQEALWDMGAVSML 426 (458)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCSC-----HHHHHHHHHHHHHHHSS-CHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCCC-----hHHHHHHHHHHHHHHcC-CHHHHHHHHHCCCHHHH
Confidence 4555555666 48999999999887666666665332 33777889999999753 56778889999999999
Q ss_pred hhhhccccchhhHHHHHHHHHHhcccccchh
Q psy8417 193 LRIMESGSELSKTVATFILQKILLDDSGLSY 223 (326)
Q Consensus 193 LriME~GsElSKtvAtfIlqKIL~dd~GL~Y 223 (326)
...++.+++-.|..|...+..|+.+. -.+|
T Consensus 427 v~LL~s~~~~v~~~Aa~AL~nL~~~~-p~ky 456 (458)
T 3nmz_A 427 KNLIHSKHKMIAMGSAAALRNLMANR-PAKY 456 (458)
T ss_dssp HTTTTCSSHHHHHHHHHHHHHHHTCC-SCC-
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHcCC-Hhhh
Confidence 99999999999999999999998764 4444
No 36
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=79.25 E-value=21 Score=33.39 Aligned_cols=160 Identities=16% Similarity=0.149 Sum_probs=86.3
Q ss_pred HHHHHHHHHHhCCc--chHHHHHHHHHhhcc------cCCChhhHhhhhh----hhHHHHHHHHHhhcCCCCCCCCChhh
Q psy8417 44 REKIYQWILELSIP--ETRENALLELSKKRE------VVPDLAPMLWHSF----GTIAALLQEIINIYPTINPATLTAHQ 111 (326)
Q Consensus 44 ~~~v~q~I~~L~~p--~~Re~AL~eLsk~re------~~~dLa~~LW~S~----Gtia~LLQEIisiYp~L~pp~Lt~~~ 111 (326)
...+..++..+.++ +.|..|...|++.-. ..+++-+.|+... .+.....+.+-...+.+.++
T Consensus 9 ~~~i~~l~~~l~s~~~~~R~~A~~~l~~i~~~~~~~~~~~~l~~~L~~~~d~~~~vr~~~~~~L~~~~~~~~~~------ 82 (588)
T 1b3u_A 9 LYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGP------ 82 (588)
T ss_dssp SHHHHHHHHHTTCSCHHHHHHHHHTHHHHHHHSCHHHHHHTHHHHHHHTCCCCHHHHHHHHHHHTTCSGGGTSG------
T ss_pred cCcHHHHHHHhhcccHHHHHHHHHhHHHHHHHhCHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhccCcH------
Confidence 34577888888765 458889888765322 1234555555422 12222222222222222111
Q ss_pred hhhHHHHHHHHHHhhh--chhhHHHHHhh------cc-----cccccccccccCCCCCccchhhhhhhhhhhhhccchHH
Q psy8417 112 SNRVCNALALLQCVAS--HQETRSLFLAA------HI-----PLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQE 178 (326)
Q Consensus 112 SnRVCnaLaLLQcvAs--hpetR~~FL~A------~i-----plyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~e 178 (326)
..+...+.+|..+.+ ++++|..-.++ ++ --++.|++..-.++. ....|.++.+++|.+...-..+
T Consensus 83 -~~~~~ll~~L~~l~~~~~~~vR~~a~~~L~~l~~~~~~~~~~~~l~~~l~~l~~~~-~~~~R~~a~~~l~~~~~~~~~~ 160 (588)
T 1b3u_A 83 -EYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGD-WFTSRTSACGLFSVCYPRVSSA 160 (588)
T ss_dssp -GGGGGGHHHHHHHTTSSCHHHHHHHHHHHHHHHTTSCHHHHHHTHHHHHHHHHTCS-SHHHHHHHGGGHHHHTTTSCHH
T ss_pred -HHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHHHHhcCHH
Confidence 112234444444443 33556544322 11 235677775444443 4578999999999888765433
Q ss_pred HHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHHhc
Q psy8417 179 VITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILL 216 (326)
Q Consensus 179 vI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKIL~ 216 (326)
. ..+++|.+...++..+.--+..|...+.++..
T Consensus 161 ~-----~~~l~~~l~~l~~d~~~~VR~~a~~~l~~l~~ 193 (588)
T 1b3u_A 161 V-----KAELRQYFRNLCSDDTPMVRRAAASKLGEFAK 193 (588)
T ss_dssp H-----HHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHH
T ss_pred H-----HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 2 35678888777776666666666666666643
No 37
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=76.10 E-value=57 Score=34.65 Aligned_cols=225 Identities=16% Similarity=0.071 Sum_probs=129.8
Q ss_pred CcchHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHHhhhchhhH---
Q psy8417 56 IPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASHQETR--- 132 (326)
Q Consensus 56 ~p~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQcvAshpetR--- 132 (326)
+++.|++|.--|+.--.. ++--..+-...|.+-.|++=.-+- .+.-.+.|+..|--++.+.|.+
T Consensus 392 d~~v~~~AveaLayLS~~-~~vk~~lv~d~g~Ip~LV~LL~s~------------d~~i~~~al~~L~NLt~~~d~q~~~ 458 (810)
T 3now_A 392 DKDIRRWAADGLAYLTLD-AECKEKLIEDKASIHALMDLARGG------------NQSCLYGVVTTFVNLCNAYEKQEML 458 (810)
T ss_dssp CSSHHHHHHHHHHHHTTS-HHHHHHHHHCHHHHHHHHHHHHTT------------CGGGHHHHHHHHHHHTTCSCCCCCC
T ss_pred CHHHHHHHHHHHHHHhCC-cHHHHHHHHccchHHHHHHHhCCC------------ChHHHHHHHHHHHHHcCCchhhhhh
Confidence 456788776666654332 222233334467777777544431 2334578888888888754321
Q ss_pred ------------------------------HHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHH
Q psy8417 133 ------------------------------SLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITF 182 (326)
Q Consensus 133 ------------------------------~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~f 182 (326)
...+++...-.|--.|.. +.+..|-.+..+++.|.. +++-...
T Consensus 459 ~~l~~la~~s~~~v~~~~~ld~~~~v~~r~~~VveaGaVp~LV~LL~s-----~s~~vqe~Aa~aL~NLA~--d~~~r~~ 531 (810)
T 3now_A 459 PEMIELAKFAKQHIPEEHELDDVDFINKRITVLANEGITTALCALAKT-----ESHNSQELIARVLNAVCG--LKELRGK 531 (810)
T ss_dssp CSCGGGTTTTCCSCCCSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTC-----CCHHHHHHHHHHHHHHHT--SHHHHHH
T ss_pred HHHHHHHHHhhccCccccccccHHHHHHHHHHHHHCcCHHHHHHHHcC-----CCHHHHHHHHHHHHHHcC--CHHHHHH
Confidence 334444433333333432 235667777777788874 3557788
Q ss_pred HHhhchhhhhhhhhccccchhhHHHHHHHHHHhcccc-cchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHH
Q psy8417 183 LLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDS-GLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCY 261 (326)
Q Consensus 183 LL~TEIiPLCLriME~GsElSKtvAtfIlqKIL~dd~-GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCY 261 (326)
+.+...+|..++.+..|+...|..|...+.++..+.+ ...+- -..+..++..++.-|..+.+...-.+..++-
T Consensus 532 Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~~~p~~~~~------~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL 605 (810)
T 3now_A 532 VVQEGGVKALLRMALEGTEKGKRHATQALARIGITINPEVSFS------GQRSLDVIRPLLNLLQQDCTALENFESLMAL 605 (810)
T ss_dssp HHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHTT------THHHHHTHHHHHHTTSTTSCHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHccCCHHHHHHHHHHHHHHhcCCChhhhhc------chhhhcHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 8899999999999999999999999999999876532 11110 0123335555555443332323334688888
Q ss_pred HHhhcC-HHHHHHHHhhCCcccccchhhhhh-cCCHHHHHHHHHHHHHhcc
Q psy8417 262 LRLSDN-ARAREALRQCLPDQLRDSTFSVCL-NDDKSTKNWLAQLIKNLES 310 (326)
Q Consensus 262 lRLsdn-~rar~aL~~~LP~~Lrd~tf~~~l-~~D~~~k~wl~qLl~nl~~ 310 (326)
..|+.+ +..+.++-+. .-- ..+..++ .+++.+++-=..++.|+..
T Consensus 606 ~NLa~~~d~~~~~Ii~a---G~l-~~Lv~LL~s~~~~Vq~~A~~~L~NLa~ 652 (810)
T 3now_A 606 TNLASMNESVRQRIIKE---QGV-SKIEYYLMEDHLYLTRAAAQCLCNLVM 652 (810)
T ss_dssp HHHTTSCHHHHHHHHHT---THH-HHHHHHHHSCCTTHHHHHHHHHHHHTT
T ss_pred HHHhcCCHHHHHHHHHc---CCH-HHHHHHHcCCCHHHHHHHHHHHHHHhC
Confidence 888876 3555554432 000 1112222 3455666666666666653
No 38
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=75.91 E-value=17 Score=38.56 Aligned_cols=146 Identities=16% Similarity=0.118 Sum_probs=104.6
Q ss_pred HHHHHHHHHHhhhc-hhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHh-hchhhhh
Q psy8417 115 VCNALALLQCVASH-QETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLT-TEIIPLC 192 (326)
Q Consensus 115 VCnaLaLLQcvAsh-petR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~-TEIiPLC 192 (326)
.+.|+.-|..+|++ ++.|...+++...--|-.+|... -+.+|-.++..||-|+..++ ....+.. .+.+|..
T Consensus 598 ~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~-----~~~Vq~~A~~~L~NLa~~~~--~~~~~v~~~g~l~~L 670 (810)
T 3now_A 598 NFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMED-----HLYLTRAAAQCLCNLVMSED--VIKMFEGNNDRVKFL 670 (810)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSC-----CTTHHHHHHHHHHHHTTSHH--HHHHHHSSSSHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCC-----CHHHHHHHHHHHHHHhCChH--HHHHHHhccCcHHHH
Confidence 45777788889988 58899999987655566666532 36789999999999998554 4444444 7899999
Q ss_pred hhhhccccchhhHHHHHHHHHHhc-ccccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhc-CHHH
Q psy8417 193 LRIMESGSELSKTVATFILQKILL-DDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSD-NARA 270 (326)
Q Consensus 193 LriME~GsElSKtvAtfIlqKIL~-dd~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsd-n~ra 270 (326)
++.++.+++-.|..|.-.+.-|-. ++..-.++... +. .+.. +..|...++..+-+....|-..|+. ++..
T Consensus 671 v~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~-~g------~I~~-Lv~LL~s~d~~vq~~A~~aL~NL~~~s~e~ 742 (810)
T 3now_A 671 ALLCEDEDEETATACAGALAIITSVSVKCCEKILAI-AS------WLDI-LHTLIANPSPAVQHRGIVIILNMINAGEEI 742 (810)
T ss_dssp HHGGGCSSHHHHHHHHHHHHHHHHHCHHHHHHHHTS-TT------HHHH-HHHHHTCSSHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHH-cC------CHHH-HHHHHCCCCHHHHHHHHHHHHHHHhCCHHH
Confidence 999999999999999888877766 44444444443 11 2222 3355667899999999999988865 4544
Q ss_pred HHHHH
Q psy8417 271 REALR 275 (326)
Q Consensus 271 r~aL~ 275 (326)
+..+.
T Consensus 743 ~~~l~ 747 (810)
T 3now_A 743 AKKLF 747 (810)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 45544
No 39
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=75.85 E-value=25 Score=35.61 Aligned_cols=148 Identities=16% Similarity=0.246 Sum_probs=98.6
Q ss_pred HHHhhhchhhHHHHHhhccc-ccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhcccc
Q psy8417 122 LQCVASHQETRSLFLAAHIP-LFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGS 200 (326)
Q Consensus 122 LQcvAshpetR~~FL~A~ip-lyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~Gs 200 (326)
|--+++++++|+.+++.++- .-|-+.|.- +-+.+|-.+.|.++-|.-...++++.++...+|+|..+..++...
T Consensus 58 l~~l~~~~~~~~l~~~~~~v~~ll~~lL~D-----~~~~Vr~~A~gaLrnL~~~~g~d~~~~l~~~~il~~L~~~l~~~~ 132 (684)
T 4gmo_A 58 IANIVQDAKCRKLLLREQVVHIVLTETLTD-----NNIDSRAAGWEILKVLAQEEEADFCVHLYRLDVLTAIEHAAKAVL 132 (684)
T ss_dssp HHHHTTSHHHHHHHHHTTHHHHHHHTTTTC-----SCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHcCCHHHHHHHHcCC-----CCHHHHHHHHHHHHHHHhhcCchHHHHHHHcChHHHHHHHHHhhH
Confidence 44567899999999998874 445666653 456799999999999998888999999999999998887665322
Q ss_pred c-----------hhhHHHHHH---HHHHhcccccchhhhcchh-hhHHHH--HHHHHHHHHHhh-c-CCchhHHHHHHHH
Q psy8417 201 E-----------LSKTVATFI---LQKILLDDSGLSYICQTYD-RFSHVA--MILGKMVISLEK-D-QSSRLLKHVVRCY 261 (326)
Q Consensus 201 E-----------lSKtvAtfI---lqKIL~dd~GL~YiC~T~e-RF~aV~--~vL~~mV~~l~~-~-ps~RLLKhIIrCY 261 (326)
+ .+|.-...+ ...++ .-|.+.|.+.+ -+.+|. ..+...+..+.. + -+..+...+.+|-
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~lL~~L~e~s~~~~~~v~~~~~l~~l~~~L~~~~~~~~~v~~~a~~~L 209 (684)
T 4gmo_A 133 ETLTTSEPPFSKLLKAQQRLVWDITGSLL---VLIGLLALARDEIHEAVATKQTILRLLFRLISADIAPQDIYEEAISCL 209 (684)
T ss_dssp HHHHCBTTBGGGSCHHHHHHHHHHHHHHH---HHHHHHHHHCHHHHHHHHTCHHHHHHHHHHHHHCCSCHHHHHHHHHHH
T ss_pred HHHhhhccccccccHHHHHHHHHHHHHHH---HHHHHHHhCCHHHHHHHHhcccHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 1 222211111 11111 23566776653 344443 344455555432 2 2458999999999
Q ss_pred HHhhc-CHHHHHHHHhh
Q psy8417 262 LRLSD-NARAREALRQC 277 (326)
Q Consensus 262 lRLsd-n~rar~aL~~~ 277 (326)
.-|++ |+.+.+.+...
T Consensus 210 ~~ls~dn~~~~~~i~~~ 226 (684)
T 4gmo_A 210 TTLSEDNLKVGQAITDD 226 (684)
T ss_dssp HHHHTTCHHHHHHHHTC
T ss_pred HHHhccCHHHHHHHHhc
Confidence 98887 57777777663
No 40
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=74.74 E-value=42 Score=34.22 Aligned_cols=152 Identities=20% Similarity=0.199 Sum_probs=103.4
Q ss_pred HHHHHHHHHHhhh-chhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhh
Q psy8417 115 VCNALALLQCVAS-HQETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCL 193 (326)
Q Consensus 115 VCnaLaLLQcvAs-hpetR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCL 193 (326)
.++|..-|+-++. +++.|....++.-.-.|--+|.. +.+.++-...+.++-|...++.+.-..+.....||..+
T Consensus 65 q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s-----~~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~~GaIp~LV 139 (584)
T 3l6x_A 65 KSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDH-----PKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALV 139 (584)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGC-----SSHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCC-----CCHHHHHHHHHHHHHHHccCCHHHHHHHHHcCCHHHHH
Confidence 3566677899996 78999999988766566666764 35788999999999999865566667778899999999
Q ss_pred hhhccc-cchhhHHHHHHHHHHhcccccchhhhcchhhhHHHHHHHHHHHH-H-------------HhhcCCchhHHHHH
Q psy8417 194 RIMESG-SELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVI-S-------------LEKDQSSRLLKHVV 258 (326)
Q Consensus 194 riME~G-sElSKtvAtfIlqKIL~dd~GL~YiC~T~eRF~aV~~vL~~mV~-~-------------l~~~ps~RLLKhII 258 (326)
+.+..+ ++-.|--|+-.+..+=.++..-.-++. .+| ..|-+++. . +...++..++++..
T Consensus 140 ~LL~s~~~~~~~e~aa~aL~nLS~~~~~k~~I~~-----~al-p~Lv~LL~~p~sg~~~~~~~~~k~~~~~d~~V~~nAa 213 (584)
T 3l6x_A 140 RLLRKARDMDLTEVITGTLWNLSSHDSIKMEIVD-----HAL-HALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTA 213 (584)
T ss_dssp HHHHHCCSHHHHHHHHHHHHHHTTSGGGHHHHHH-----HTH-HHHHHHTHHHHHCCC----------CCCCHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHHhCCchhhHHHHh-----ccH-HHHHHHHhcccccccccccccccccccccHHHHHHHH
Confidence 999984 544466666666665554433222221 122 22222221 0 01123468999999
Q ss_pred HHHHHhhc-CHHHHHHHHhh
Q psy8417 259 RCYLRLSD-NARAREALRQC 277 (326)
Q Consensus 259 rCYlRLsd-n~rar~aL~~~ 277 (326)
+|---||. ++..|.+++++
T Consensus 214 ~~L~NLs~~~~~~R~~i~~~ 233 (584)
T 3l6x_A 214 GCLRNVSSERSEARRKLREC 233 (584)
T ss_dssp HHHHHHTSSCHHHHHHHHHS
T ss_pred HHHHHHhcCCHHHHHHHHHc
Confidence 99999986 46778888864
No 41
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=72.94 E-value=76 Score=31.37 Aligned_cols=180 Identities=14% Similarity=0.075 Sum_probs=96.5
Q ss_pred HHHHHHHhCCcc--hHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHH
Q psy8417 47 IYQWILELSIPE--TRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQC 124 (326)
Q Consensus 47 v~q~I~~L~~p~--~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQc 124 (326)
+.+.+..+.+|+ .|..|-..|.+-.++ +..+....|++-+.+. +....-|-..++.|=.+
T Consensus 3 l~~~L~~~~s~d~~~r~~A~~~L~~~~~~---------~~~~~~~~L~~~l~~~---------~~~~~vR~~a~~~Lk~~ 64 (876)
T 1qgr_A 3 LITILEKTVSPDRLELEAAQKFLERAAVE---------NLPTFLVELSRVLANP---------GNSQVARVAAGLQIKNS 64 (876)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHCT---------TSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHhc---------ChhhHHHHHHHHHhCC---------CCCHHHHHHHHHHHHHh
Confidence 556777777665 588888777442221 1245555666655431 11233466666655555
Q ss_pred hhhchhhH---------------HHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchh
Q psy8417 125 VASHQETR---------------SLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEII 189 (326)
Q Consensus 125 vAshpetR---------------~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIi 189 (326)
+....+.| +..++.+ |...|.. +-+.+ -+..-+|+.+++.+-++ --..|++
T Consensus 65 i~~~~~~~~~~~~~~w~~l~~~~~~~ik~~----ll~~l~~-----~~~~~-~~~~~~l~~i~~~~~~~----~~w~~ll 130 (876)
T 1qgr_A 65 LTSKDPDIKAQYQQRWLAIDANARREVKNY----VLHTLGT-----ETYRP-SSASQCVAGIACAEIPV----NQWPELI 130 (876)
T ss_dssp HCCSSHHHHHHHHHHHHTSCHHHHHHHHHH----HHHHTTT-----CCSSS-CHHHHHHHHHHHHHGGG----TCCTTHH
T ss_pred ccccchHhHHHHHhhhccCCHHHHHHHHHH----HHHHhCC-----CcHHH-HHHHHHHHHHHHhhCcc----cccHHHH
Confidence 54322211 1122222 2222322 12334 56667777777754220 0135788
Q ss_pred hhhhhhhccc--cchhhHHHHHHHHHHhcccccchhhhcchhhhHH-HHHHHHHHHHHHhhc-CCchhHHHHHHHHHHhh
Q psy8417 190 PLCLRIMESG--SELSKTVATFILQKILLDDSGLSYICQTYDRFSH-VAMILGKMVISLEKD-QSSRLLKHVVRCYLRLS 265 (326)
Q Consensus 190 PLCLriME~G--sElSKtvAtfIlqKIL~dd~GL~YiC~T~eRF~a-V~~vL~~mV~~l~~~-ps~RLLKhIIrCYlRLs 265 (326)
|..+..+..+ +.-.|..|..++.++..+-. .+-|.. +..++..++..+..+ ++..+-+.+++|+..+.
T Consensus 131 ~~l~~~l~~~~~~~~~r~~al~~l~~l~~~~~--------~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~ 202 (876)
T 1qgr_A 131 PQLVANVTNPNSTEHMKESTLEAIGYICQDID--------PEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSL 202 (876)
T ss_dssp HHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSC--------HHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHG
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcC--------HhhHHhHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Confidence 8888888888 77778888888887775421 111222 223344444444333 36777788888888765
Q ss_pred c
Q psy8417 266 D 266 (326)
Q Consensus 266 d 266 (326)
.
T Consensus 203 ~ 203 (876)
T 1qgr_A 203 E 203 (876)
T ss_dssp G
T ss_pred H
Confidence 4
No 42
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=72.73 E-value=52 Score=33.26 Aligned_cols=106 Identities=13% Similarity=0.201 Sum_probs=69.6
Q ss_pred CccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHHhcccccchhhhcchhhhH-HH
Q psy8417 156 PFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFS-HV 234 (326)
Q Consensus 156 ~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKIL~dd~GL~YiC~T~eRF~-aV 234 (326)
+-..+|..++..++.+++.........+ .+++|..++.+..+++-.|..|.-.+.++.... ++.|. ++
T Consensus 186 ~~~~vR~~A~~aL~~~~~~~~~~~~~~~--~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~~~~---------~~~~~~~l 254 (852)
T 4fdd_A 186 SSPKIRSHAVACVNQFIISRTQALMLHI--DSFIENLFALAGDEEPEVRKNVCRALVMLLEVR---------MDRLLPHM 254 (852)
T ss_dssp SSHHHHHHHHHHHHTTTTTTCHHHHTSH--HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHC---------HHHHGGGH
T ss_pred CCHHHHHHHHHHHHHHHhcccHHHHHHH--HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhC---------HHHHHHHH
Confidence 3567899999999999987654332221 367788888777777777777777777776532 22221 12
Q ss_pred HHHHHHHHHHHhhcCCchhHHHHHHHHHHhhcCHHHHHH
Q psy8417 235 AMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREA 273 (326)
Q Consensus 235 ~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsdn~rar~a 273 (326)
..++..++. +..++++.+-...+.+...+++++..++.
T Consensus 255 ~~l~~~l~~-~~~~~~~~vr~~a~e~l~~l~~~~~~~~~ 292 (852)
T 4fdd_A 255 HNIVEYMLQ-RTQDQDENVALEACEFWLTLAEQPICKDV 292 (852)
T ss_dssp HHHHHHHHH-HHTCSSHHHHHHHHHHHHHHTTSTTHHHH
T ss_pred HHHHHHHHH-HccCCcHHHHHHHHHHHHHHhcchhHHHH
Confidence 344444444 34567778878888888889887654443
No 43
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=67.74 E-value=1e+02 Score=30.80 Aligned_cols=135 Identities=16% Similarity=0.138 Sum_probs=76.7
Q ss_pred HHHHHHHhCCc--chHHHHHHHHHhhcc--cCCChhhHhhhhh----------hhHHHHHHHHHhhcCCCCCC-C-----
Q psy8417 47 IYQWILELSIP--ETRENALLELSKKRE--VVPDLAPMLWHSF----------GTIAALLQEIINIYPTINPA-T----- 106 (326)
Q Consensus 47 v~q~I~~L~~p--~~Re~AL~eLsk~re--~~~dLa~~LW~S~----------Gtia~LLQEIisiYp~L~pp-~----- 106 (326)
+..+..|+.++ -.|-.||.-|+..++ ..+++.+.+=... -+-+.-+--+...+|.+-++ .
T Consensus 113 iN~l~kDl~~~n~~ir~lALr~L~~i~~~e~~~~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~~~p~~~~~~~~~~~l 192 (621)
T 2vgl_A 113 NNAIKNDLASRNPTFMGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGDWTSRV 192 (621)
T ss_dssp HHHHHHHHHSCCHHHHHHHHHHHHHHCCHHHHHHHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCGGGCCCCSCHHHH
T ss_pred HHHHHHhcCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhChhhcCchhHHHHH
Confidence 33555677754 449999999999875 2233333332222 11223344667778876652 2
Q ss_pred ---CChhhhhhHHHHHHHHHHhhhchhhHHHHHhhccc---ccccccccccCCC--------CCccchhhhhhhhhhhhh
Q psy8417 107 ---LTAHQSNRVCNALALLQCVASHQETRSLFLAAHIP---LFLYPFLHTTSKT--------RPFEYLRLTSLGVIGALV 172 (326)
Q Consensus 107 ---Lt~~~SnRVCnaLaLLQcvAshpetR~~FL~A~ip---lyLyPfLnttsk~--------r~fE~LRLtSLGVIgaLv 172 (326)
|......-+.+|+++|..++.+... .|. .-+| -+|..++....-+ -+-|.++..-|..++.+.
T Consensus 193 ~~lL~d~d~~V~~~a~~~l~~i~~~~~~--~~~-~~~~~~~~~L~~ll~~~~~~~~~~~~~~~~~~w~qi~il~ll~~~~ 269 (621)
T 2vgl_A 193 VHLLNDQHLGVVTAATSLITTLAQKNPE--EFK-TSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCYP 269 (621)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHHHHCHH--HHT-THHHHHHHHHHHHHHCCSSSCSTTEETTEESHHHHHHHHHHGGGSS
T ss_pred HHHhCCCCccHHHHHHHHHHHHHHhChH--HHH-HHHHHHHHHHHHHHhCCCCCccchhhcCCCCchHHHHHHHHHHHhC
Confidence 3333445678999999998864321 121 1122 1233333221110 125889999999999998
Q ss_pred ccchHHHHHHHH
Q psy8417 173 KTDEQEVITFLL 184 (326)
Q Consensus 173 K~dd~evI~fLL 184 (326)
+.+|++.-+.+.
T Consensus 270 ~~~d~~~~~~l~ 281 (621)
T 2vgl_A 270 PPEDPAVRGRLT 281 (621)
T ss_dssp SCSSHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 887777655443
No 44
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=65.72 E-value=7.7 Score=35.09 Aligned_cols=229 Identities=14% Similarity=0.114 Sum_probs=110.8
Q ss_pred CcchHHHHHHHHHhhcccCCCh----hhHhhhhh--hhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHHhhhch
Q psy8417 56 IPETRENALLELSKKREVVPDL----APMLWHSF--GTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASHQ 129 (326)
Q Consensus 56 ~p~~Re~AL~eLsk~re~~~dL----a~~LW~S~--Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQcvAshp 129 (326)
+++.|..|..-|-+.-+....- ....|+.. .....+-+.++.. +..++ ... +.+|.+++- +|.+.
T Consensus 50 ~~~vR~~a~~~Lk~~i~~~~~~~~~~~~~~~~~l~~~~~~~ik~~ll~~---l~~~~--~~v-~~~~~~i~~---ia~~~ 120 (462)
T 1ibr_B 50 SQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQT---LGTET--YRP-SSASQCVAG---IACAE 120 (462)
T ss_dssp CHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHTSCHHHHHHHHHHHHHH---TTCCC--SSS-CSHHHHHHH---HHHHH
T ss_pred ChHHHHHHHHHHHHhccccchHHHHHHHhhhhcCCHHHHHHHHHHHHHH---hCCCC--chh-hHHHHHHHH---HHHHh
Confidence 4566888887766543321100 01246543 2333344444443 22211 122 455665543 34442
Q ss_pred hhHHHHHhhcccccccccccccCCCCC-ccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccc--cchhhHH
Q psy8417 130 ETRSLFLAAHIPLFLYPFLHTTSKTRP-FEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESG--SELSKTV 206 (326)
Q Consensus 130 etR~~FL~A~iplyLyPfLnttsk~r~-fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~G--sElSKtv 206 (326)
.- ..+.|- +.|+|-...++.. -+..|...+.+++.+++.-.++...-.. ..++|.+++.++.. +.--+..
T Consensus 121 ~~-----~~~w~~-ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~-~~ll~~l~~~l~~~~~~~~vr~~ 193 (462)
T 1ibr_B 121 IP-----VNQWPE-LIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKS-NEILTAIIQGMRKEEPSNNVKLA 193 (462)
T ss_dssp GG-----GTCCTT-HHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGGH-HHHHHHHHHHHSTTCCCHHHHHH
T ss_pred cc-----ccccHH-HHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCchhhHhHH-HHHHHHHHHHhCCCCCCHHHHHH
Confidence 10 112332 3444433333322 4578999999999998753222211111 25889999998877 4555666
Q ss_pred HHHHHHHHhcccccchhhhcchhhhHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhcCHHHHHHHHhhCCcccccch
Q psy8417 207 ATFILQKILLDDSGLSYICQTYDRFSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQCLPDQLRDST 286 (326)
Q Consensus 207 AtfIlqKIL~dd~GL~YiC~T~eRF~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsdn~rar~aL~~~LP~~Lrd~t 286 (326)
|.-.+..++. |+-...+... ....+-..+.....++++.+-+.+.+|...+.++. -+.+...++..+..-.
T Consensus 194 a~~~l~~~~~------~~~~~~~~~~-~~~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~~--~~~~~~~~~~~l~~~~ 264 (462)
T 1ibr_B 194 ATNALLNSLE------FTKANFDKES-ERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLY--YQYMETYMGPALFAIT 264 (462)
T ss_dssp HHHHHHHHTT------TTHHHHTSHH-HHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHC--GGGCTTTTTTTHHHHH
T ss_pred HHHHHHHHHH------HHHHhhhhhH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 6666666542 1111111100 00112223344567778888888888888877642 1223333332222222
Q ss_pred hhhhhcCCHHHHHHHHHHHHHhc
Q psy8417 287 FSVCLNDDKSTKNWLAQLIKNLE 309 (326)
Q Consensus 287 f~~~l~~D~~~k~wl~qLl~nl~ 309 (326)
+..+-..|+.++.--.++|.++.
T Consensus 265 ~~~~~~~~~~v~~~a~~~l~~~~ 287 (462)
T 1ibr_B 265 IEAMKSDIDEVALQGIEFWSNVC 287 (462)
T ss_dssp HHHHHCSSHHHHHHHHHHHHHHH
T ss_pred HHHHcCCchHHHHHHHHHHHHHH
Confidence 22222346666655555555553
No 45
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=65.66 E-value=90 Score=30.77 Aligned_cols=135 Identities=12% Similarity=0.034 Sum_probs=76.0
Q ss_pred cchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccc-cchhhHHHHHHHHHHhcccccchhhhcchhhhHHHHH
Q psy8417 158 EYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESG-SELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAM 236 (326)
Q Consensus 158 E~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~G-sElSKtvAtfIlqKIL~dd~GL~YiC~T~eRF~aV~~ 236 (326)
+.+|-..--+|+.+++.+-++- -+.|++|..+..+..+ ++-.|-.|..++..|..+-.. +. ...++ .+..
T Consensus 109 ~~vr~~~~~~l~~i~~~~~p~~----~w~~ll~~L~~~l~~~~~~~~r~~al~~l~~l~~~~~~-~~--~~~~~--~~~~ 179 (861)
T 2bpt_A 109 PRIANAAAQLIAAIADIELPHG----AWPELMKIMVDNTGAEQPENVKRASLLALGYMCESADP-QS--QALVS--SSNN 179 (861)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGT----CCHHHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTSST-TS--STTGG--GHHH
T ss_pred hHHHHHHHHHHHHHHHhhCccc----ccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCCh-hh--hHHHH--HHHH
Confidence 6788888888888877653210 1346777777778877 667777888888877753110 00 00112 2334
Q ss_pred HHHHHHHHHhhc-CCchhHHHHHHHHHHhhc----CH---HHHHHHHhhCCcccccchhhhhhcCCHHHHHHHHHHHHHh
Q psy8417 237 ILGKMVISLEKD-QSSRLLKHVVRCYLRLSD----NA---RAREALRQCLPDQLRDSTFSVCLNDDKSTKNWLAQLIKNL 308 (326)
Q Consensus 237 vL~~mV~~l~~~-ps~RLLKhIIrCYlRLsd----n~---rar~aL~~~LP~~Lrd~tf~~~l~~D~~~k~wl~qLl~nl 308 (326)
++..++..+... +++.+-+.+++|+..+.+ +. ..++.+-+.++.. +-.+|+.++++.-+.+..+
T Consensus 180 ll~~l~~~l~~~~~~~~vr~~al~~l~~~~~~~~~~~~~~~~~~~ll~~l~~~--------~~~~~~~~r~~a~~~l~~l 251 (861)
T 2bpt_A 180 ILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEA--------TQAEDIEVQAAAFGCLCKI 251 (861)
T ss_dssp HHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHH--------HTCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHccChhHHHHHHHHHHHH--------hcCCCHHHHHHHHHHHHHH
Confidence 555555544432 378888889999876532 11 1122222222211 1234777777766666555
Q ss_pred c
Q psy8417 309 E 309 (326)
Q Consensus 309 ~ 309 (326)
.
T Consensus 252 ~ 252 (861)
T 2bpt_A 252 M 252 (861)
T ss_dssp H
T ss_pred H
Confidence 4
No 46
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=56.53 E-value=1.5e+02 Score=30.76 Aligned_cols=140 Identities=14% Similarity=0.173 Sum_probs=74.8
Q ss_pred hHHHHHHHHHHhCCcchHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHH
Q psy8417 43 EREKIYQWILELSIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALL 122 (326)
Q Consensus 43 d~~~v~q~I~~L~~p~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLL 122 (326)
|.+.+.+.+....+|+....|-..|- .-+..|+... .|++.+.+. +.....|...++.|=
T Consensus 3 d~~~l~~~L~~~~spd~~~rAe~~L~-~~~~~p~~~~----------~L~~il~~~---------~~~~~vR~~A~i~lk 62 (960)
T 1wa5_C 3 DLETVAKFLAESVIASTAKTSERNLR-QLETQDGFGL----------TLLHVIAST---------NLPLSTRLAGALFFK 62 (960)
T ss_dssp HHHHHHHHHHHTTSGGGHHHHHHHHH-HHHTSTTHHH----------HHHHHHHCT---------TSCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhcCCCHHHHHHHHHH-HhhcCCCHHH----------HHHHHHhcC---------CCCHHHHHHHHHHHH
Confidence 56788999999999985333555553 2244454322 333333211 011233555554444
Q ss_pred HHhhhc----------hhhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhh
Q psy8417 123 QCVASH----------QETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLC 192 (326)
Q Consensus 123 QcvAsh----------petR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLC 192 (326)
..|..| |+--+..+|.++.-.|. .. + ..+|-..=-+|+.+++.|-++ -+.|++|-.
T Consensus 63 n~i~~~w~~~~~~~~l~~~~k~~ik~~ll~~l~----~~----~-~~ir~~l~~~ia~ia~~d~p~-----~Wp~ll~~L 128 (960)
T 1wa5_C 63 NFIKRKWVDENGNHLLPANNVELIKKEIVPLMI----SL----P-NNLQVQIGEAISSIADSDFPD-----RWPTLLSDL 128 (960)
T ss_dssp HHHHHHSBCSSSCBSSCHHHHHHHHHHHHHHHH----HS----C-HHHHHHHHHHHHHHHHHHSTT-----TCTTHHHHH
T ss_pred HHHHhcCCCcccCCCCCHHHHHHHHHHHHHHHH----hC----C-HHHHHHHHHHHHHHHHhhCcc-----chhHHHHHH
Confidence 444322 11222344444433321 11 1 445544444566666654321 235777888
Q ss_pred hhhhccccchhhHHHHHHHHHHhc
Q psy8417 193 LRIMESGSELSKTVATFILQKILL 216 (326)
Q Consensus 193 LriME~GsElSKtvAtfIlqKIL~ 216 (326)
+..+..++...+-.|..++.+|..
T Consensus 129 ~~~l~s~~~~~~~~aL~~l~~i~~ 152 (960)
T 1wa5_C 129 ASRLSNDDMVTNKGVLTVAHSIFK 152 (960)
T ss_dssp HTTCCSSCTTHHHHHHHHHHHHHG
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHH
Confidence 888888888888888888888865
No 47
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=53.35 E-value=44 Score=35.62 Aligned_cols=147 Identities=15% Similarity=0.161 Sum_probs=85.2
Q ss_pred hHHHHHHHHHhhcccC-CChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChh--hhhh-HHHHHHHHHHhhhch-----
Q psy8417 59 TRENALLELSKKREVV-PDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAH--QSNR-VCNALALLQCVASHQ----- 129 (326)
Q Consensus 59 ~Re~AL~eLsk~re~~-~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~--~SnR-VCnaLaLLQcvAshp----- 129 (326)
.|++|..-|++---+. |.++---....|.+-.|+ ++.+..|.-..+.|+.. .... ..+||.-|--+|+.|
T Consensus 517 ~k~~AA~ALArLlis~np~~~f~~~~~~~aI~pLv-~LL~~~~~~~~~~l~~~~~~~~l~~feAL~ALTNLAs~~~n~~E 595 (778)
T 3opb_A 517 IRILGCRALTRMLIFTNPGLIFKKYSALNAIPFLF-ELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNLASSETSDGE 595 (778)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHSSSSCSTTHHHHHH-HTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHHHHCCSHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHcCCCccccchHHHH-HHcCCCCCcccccccccccccHHHHHHHHHHHHHHhcCCcccch
Confidence 4888888888866322 322200011136666655 33332222111111111 0111 568888888999997
Q ss_pred hhHHHHHhh--cccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHH--HHHH-hhc----hhhhhhhhhcccc
Q psy8417 130 ETRSLFLAA--HIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVI--TFLL-TTE----IIPLCLRIMESGS 200 (326)
Q Consensus 130 etR~~FL~A--~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI--~fLL-~TE----IiPLCLriME~Gs 200 (326)
++|...++. -+|.... +|.. ..+.+|=++..+|+.|+...+ .| .|+- +.. -+++.+..+..+.
T Consensus 596 ~~r~~Ii~~~ga~~~L~~-LL~s-----~n~~VrrAA~elI~NL~~~~e--~i~~k~~~~~~~~~~~rL~lLV~Ll~s~D 667 (778)
T 3opb_A 596 EVCKHIVSTKVYWSTIEN-LMLD-----ENVPLQRSTLELISNMMSHPL--TIAAKFFNLENPQSLRNFNILVKLLQLSD 667 (778)
T ss_dssp HHHHHHHHSHHHHHHHHH-GGGC-----SSHHHHHHHHHHHHHHHTSGG--GTGGGTSCCSSHHHHHHHHHHHHGGGCSC
T ss_pred HHHHHHHHhcCHHHHHHH-HHhC-----CCHHHHHHHHHHHHHHhCCcH--HHHHHHHhhcCchhhccHHHHHHHHcCCC
Confidence 678888885 3444333 3331 245899999999999998444 43 3432 111 2778888888898
Q ss_pred chhhHHHHHHHHHH
Q psy8417 201 ELSKTVATFILQKI 214 (326)
Q Consensus 201 ElSKtvAtfIlqKI 214 (326)
+-+|..|.-++.-+
T Consensus 668 ~~~r~AAagALAnL 681 (778)
T 3opb_A 668 VESQRAVAAIFANI 681 (778)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 88888887665554
No 48
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=51.73 E-value=90 Score=30.59 Aligned_cols=58 Identities=19% Similarity=0.276 Sum_probs=32.8
Q ss_pred hhchhhHHHHHhh------cccccccccccc--cCCCCCccchhhhhhhhhhhhhccch-HHHHHHHH
Q psy8417 126 ASHQETRSLFLAA------HIPLFLYPFLHT--TSKTRPFEYLRLTSLGVIGALVKTDE-QEVITFLL 184 (326)
Q Consensus 126 AshpetR~~FL~A------~iplyLyPfLnt--tsk~r~fE~LRLtSLGVIgaLvK~dd-~evI~fLL 184 (326)
.+++++|..-|++ +-|-.+-+++.. ...+.+ +++|...|-+++.++..++ .+++.-|+
T Consensus 293 ~~d~~vr~~aL~~l~~i~~~~p~~~~~~~~~~~~~~~d~-~~Ir~~al~~L~~l~~~~nv~~iv~~L~ 359 (591)
T 2vgl_B 293 SGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDP-IYVKLEKLDIMIRLASQANIAQVLAELK 359 (591)
T ss_dssp TSCHHHHHHHHHHHHHHHHHCCSTTTTCTTTTSCCTTSC-HHHHHHHHHHHHHTCCSSTHHHHHHHHH
T ss_pred cCCccHHHHHHHHHHHHHHhChHHHHHHHHhheeccCCh-HHHHHHHHHHHHHHCChhhHHHHHHHHH
Confidence 3666776655543 123222222221 112455 8999999999999887654 34555444
No 49
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=50.72 E-value=39 Score=34.22 Aligned_cols=161 Identities=14% Similarity=0.171 Sum_probs=93.7
Q ss_pred chHHHHHHHHHhh-cccCCChhhHhhhhhhhHHHH---HHHHHhhcCCCCCC-CCChhhhhhHH-----HHHHHHHHhhh
Q psy8417 58 ETRENALLELSKK-REVVPDLAPMLWHSFGTIAAL---LQEIINIYPTINPA-TLTAHQSNRVC-----NALALLQCVAS 127 (326)
Q Consensus 58 ~~Re~AL~eLsk~-re~~~dLa~~LW~S~Gtia~L---LQEIisiYp~L~pp-~Lt~~~SnRVC-----naLaLLQcvAs 127 (326)
+-|++|.--|..- .+.-+|..-.+|.+ |+++.| |..+.+..-...++ ......+.+.- |++.+|-+++.
T Consensus 91 ~Vr~~A~gaLrnL~~~~g~d~~~~l~~~-~il~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e 169 (684)
T 4gmo_A 91 DSRAAGWEILKVLAQEEEADFCVHLYRL-DVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLAL 169 (684)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHHHT-THHHHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCchHHHHHHHc-ChHHHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3466554333211 11224555667765 455544 44444433333332 22222222322 67888999986
Q ss_pred ch-hhHHHHHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhh--hhhhhccccchhh
Q psy8417 128 HQ-ETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPL--CLRIMESGSELSK 204 (326)
Q Consensus 128 hp-etR~~FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPL--CLriME~GsElSK 204 (326)
+. +....+.+......|..+|-..++. -+.++.+.+..+..+.. |+.+.+..+.+.....+ ++--+..++...|
T Consensus 170 ~s~~~~~~v~~~~~l~~l~~~L~~~~~~--~~~v~~~a~~~L~~ls~-dn~~~~~~i~~~~~~~~~~~ll~~~~~~~~~~ 246 (684)
T 4gmo_A 170 ARDEIHEAVATKQTILRLLFRLISADIA--PQDIYEEAISCLTTLSE-DNLKVGQAITDDQETHVYDVLLKLATGTDPRA 246 (684)
T ss_dssp HCHHHHHHHHTCHHHHHHHHHHHHHCCS--CHHHHHHHHHHHHHHHT-TCHHHHHHHHTCCSSCHHHHHHHHHHSSCTTH
T ss_pred CCHHHHHHHHhcccHHHHHHHHHhcCCC--cHHHHHHHHHHHHHHhc-cCHHHHHHHHhcchHHHHHHHHHHhcCCcHHH
Confidence 54 5556677777666677776443332 24688888888888877 44567777777665443 3334556788899
Q ss_pred HHHHHHHHHHhcccccch
Q psy8417 205 TVATFILQKILLDDSGLS 222 (326)
Q Consensus 205 tvAtfIlqKIL~dd~GL~ 222 (326)
++|..|+..|...-..+.
T Consensus 247 ~la~giL~Ni~~~~~~~d 264 (684)
T 4gmo_A 247 VMACGVLHNVFTSLQWMD 264 (684)
T ss_dssp HHHHHHHHHHHHHHTCBT
T ss_pred HHHHHHHHhHhhhhhhhh
Confidence 999999999865433333
No 50
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=44.47 E-value=68 Score=33.93 Aligned_cols=70 Identities=11% Similarity=0.167 Sum_probs=40.3
Q ss_pred ccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHHh
Q psy8417 144 LYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKIL 215 (326)
Q Consensus 144 LyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKIL 215 (326)
+.|+|-..-++.+....|-.++.+++.+++.....+..|+ .++++..+..++..+.--|..|.--+..+.
T Consensus 134 llp~L~~~l~~~~~~~~~~~al~~l~~~~~~~~~~l~~~~--~~ll~~l~~~L~~~~~~vR~~a~~al~~l~ 203 (1230)
T 1u6g_C 134 ITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFH--PSILTCLLPQLTSPRLAVRKRTIIALGHLV 203 (1230)
T ss_dssp HHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTCSSCTTTH--HHHHHHHGGGGGCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhHhHHHHHH--HHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 3444433322233457888899998888864322222332 567777777777765555555555555544
No 51
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=41.99 E-value=2.2e+02 Score=30.39 Aligned_cols=163 Identities=15% Similarity=0.138 Sum_probs=98.8
Q ss_pred HHHHHHHHHhCC-cchHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHH
Q psy8417 45 EKIYQWILELSI-PETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQ 123 (326)
Q Consensus 45 ~~v~q~I~~L~~-p~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQ 123 (326)
+.-..|+.++.+ .+.|..|+.-|+|-+.. +..+ .+.+.-|..-++.-- ..+ .....-.++..|.
T Consensus 295 ~~~~~~L~~~l~~~~ir~lAavvL~KL~~~-~~~~------~~si~~La~~~~~~L---~~~-----~~~~~~~AvEgLa 359 (778)
T 3opb_A 295 ENYLQLLERSLNVEDVQIYSALVLVKTWSF-TKLT------CINLKQLSEIFINAI---SRR-----IVPKVEMSVEALA 359 (778)
T ss_dssp HHHHHHHHHHTTSGGGHHHHHHHHHHHTGG-GTCT------TCCHHHHHHHHHHHT---TTC-----CHHHHHHHHHHHH
T ss_pred HhHHHHHHHHhccHHHHHHHHHHHHHHhcC-CCCC------cCcHHHHHHHHHHHH---hcC-----CccHHHHHHHHHH
Confidence 445577777764 45588899999987652 2221 244444443333322 111 1222568888999
Q ss_pred HhhhchhhHHHHHhhcc-cccccccccccCCCCCccchhhhhhhhhhhhhccc---------------------------
Q psy8417 124 CVASHQETRSLFLAAHI-PLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTD--------------------------- 175 (326)
Q Consensus 124 cvAshpetR~~FL~A~i-plyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~d--------------------------- 175 (326)
.+..+|++|..+.+..= ..=|.-.+++ +.+-.+-...|.|++-+.+..
T Consensus 360 YLSl~~~VKe~L~~d~~~L~~Lv~llk~----~~d~s~~Ygal~IL~NLt~~~~~~~~e~~~l~~Lk~~A~~~~p~~~~~ 435 (778)
T 3opb_A 360 YLSLKASVKIMIRSNESFTEILLTMIKS----QKMTHCLYGLLVIMANLSTLPEEXXXXXXXXXXXXXXXXXXXPAADKV 435 (778)
T ss_dssp HHTTSSHHHHHHHHCHHHHHHHHHHHTT----TCCTTHHHHHHHHHHHTTCCCCCCCCCCC------------------C
T ss_pred HHhCCHHHHHHHHhCHHHHHHHHHHHhC----CCCchHHHHHHHHHHHhcCCCcccchhhhhhhhhhhhccccCcccCcc
Confidence 99999999987765532 2223333332 222233334444444443311
Q ss_pred ------hHH----HHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHHhcccccchhhhc
Q psy8417 176 ------EQE----VITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDSGLSYICQ 226 (326)
Q Consensus 176 ------d~e----vI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKIL~dd~GL~YiC~ 226 (326)
+.+ ....+++...||.......+++.-+|..|.-++..|=.++.+...+.+
T Consensus 436 d~~~~~~~~v~~~~~~~l~eaGvIp~Lv~Ll~S~s~~~re~A~~aL~nLS~d~~~R~~lvq 496 (778)
T 3opb_A 436 GAEKAAKEDILLFNEKYILRTELISFLKREMHNLSPNCKQQVVRIIYNITRSKNFIPQLAQ 496 (778)
T ss_dssp CTHHHHHHHHHHHHHHHTTTTTHHHHHHHHGGGSCHHHHHHHHHHHHHHHTSGGGHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 112 345778889999999999999999999999999999777754444443
No 52
>3dev_A SH1221; alpha-beta protein., structural genomics, PSI-2, protein STR initiative, northeast structural genomics consortium, NESG; 3.10A {Staphylococcus haemolyticus}
Probab=41.23 E-value=48 Score=30.96 Aligned_cols=54 Identities=17% Similarity=0.161 Sum_probs=45.6
Q ss_pred hchhhhhhhhhccccchhhHHHHHHHHHHhcccccchhhhcchhhhHHHHHHHH
Q psy8417 186 TEIIPLCLRIMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAMILG 239 (326)
Q Consensus 186 TEIiPLCLriME~GsElSKtvAtfIlqKIL~dd~GL~YiC~T~eRF~aV~~vL~ 239 (326)
+|||--.++-++.|-+++|.+|+-++.-|+.|-.++.|-..|++=|.+++..+.
T Consensus 127 ~eiv~~~~~~~~~~~~i~~~~A~~L~~GI~tDTg~F~~~~tt~~t~~aaa~L~~ 180 (320)
T 3dev_A 127 SEIIFDFISHFNDLSIIDEHVARVLYLGIVGDTGRFLFSNTSPHTMEVASQLLA 180 (320)
T ss_dssp HHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHTTTTTSTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHccCcCCCCCCHHHHHHHHHHHH
Confidence 366666666677788999999999999999999999999888888888877654
No 53
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=40.66 E-value=14 Score=36.62 Aligned_cols=69 Identities=16% Similarity=0.163 Sum_probs=50.2
Q ss_pred ccccccCCCCC-ccchhhhhhhhhhhhhccchH-HHHHHHHhhchhhhhhh-hhccccchhhHHHHHHHHHHh
Q psy8417 146 PFLHTTSKTRP-FEYLRLTSLGVIGALVKTDEQ-EVITFLLTTEIIPLCLR-IMESGSELSKTVATFILQKIL 215 (326)
Q Consensus 146 PfLnttsk~r~-fE~LRLtSLGVIgaLvK~dd~-evI~fLL~TEIiPLCLr-iME~GsElSKtvAtfIlqKIL 215 (326)
+|+......+. -+.+|-++++++|.|++.-.. ++..|+ ...++|-.++ .++..++-.|..|.+.+..|-
T Consensus 799 ~~l~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~-~~~~i~~ll~~~l~~~~~~~r~~a~~a~~~~~ 870 (876)
T 1qgr_A 799 SFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVE-ARPMIHELLTEGRRSKTNKAKTLARWATKELR 870 (876)
T ss_dssp HHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHCTHHHHHHH-TSHHHHHHHHHHHHCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhCcHHHHHHH-hcHHHHHHHHHHhhcCCHhHHHHHHHHHHHHH
Confidence 55543323332 578999999999999987665 666666 4566776666 888888888999998877653
No 54
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=40.01 E-value=3.5e+02 Score=28.30 Aligned_cols=184 Identities=15% Similarity=0.250 Sum_probs=105.0
Q ss_pred hhHHHHHHHHHHhhhc-hhhHHHHHhhcccccccccccccCCCCCccchhhh----hhhhhhhhhccchH-----HHHHH
Q psy8417 113 NRVCNALALLQCVASH-QETRSLFLAAHIPLFLYPFLHTTSKTRPFEYLRLT----SLGVIGALVKTDEQ-----EVITF 182 (326)
Q Consensus 113 nRVCnaLaLLQcvAsh-petR~~FL~A~iplyLyPfLnttsk~r~fE~LRLt----SLGVIgaLvK~dd~-----evI~f 182 (326)
--|-.+|.++-.++.+ +.....|.....+-+|-|+|......-..-.-|+. .|.+|..||..+.+ .=-+-
T Consensus 227 ivv~DCL~ll~nLLr~N~sNQ~~FrEt~~i~~L~~LL~~~~~~~~W~~Qk~~N~~~~L~iIrlLv~~~~~~~~t~~nQ~~ 306 (651)
T 3grl_A 227 IVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWFEVGDENSGWSAQKVTNLHLMLQLVRVLVSPNNPPGATSSCQKA 306 (651)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTTCGGGGGGGGCCCSCSSCCCHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHcCCHHHHHHHhCCCccccccHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 4466788888888855 46899999999888999999753221000011333 68899999987442 22345
Q ss_pred HHhhchhhhhhhhhcc-c-cchhhHHHHHHHHHHhcccccc-hhhhcch----hhhHHHHHHHHHHHHHHhhcCCchhH-
Q psy8417 183 LLTTEIIPLCLRIMES-G-SELSKTVATFILQKILLDDSGL-SYICQTY----DRFSHVAMILGKMVISLEKDQSSRLL- 254 (326)
Q Consensus 183 LL~TEIiPLCLriME~-G-sElSKtvAtfIlqKIL~dd~GL-~YiC~T~----eRF~aV~~vL~~mV~~l~~~ps~RLL- 254 (326)
+.++.+++..+++.=. | ++--|+.|...+.-++.+..-. +|+.+.. .-.-+|...|-+|+ ....+=-+
T Consensus 307 ~~~~g~l~~Ll~ll~~~~~p~~i~~~Al~tla~~irgN~~~Q~~fa~~~vp~~~~~p~li~lL~~~~----~~~~~~~lR 382 (651)
T 3grl_A 307 MFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFASVNAPSNPPRPAIVVLLMSMV----NERQPFVLR 382 (651)
T ss_dssp HHHTTHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHCEESSSSCEEHHHHHHHHHT----CTTSCHHHH
T ss_pred HHHCCCHHHHHHHHccCCCCHHHHHHHHHHHHHHHhCCHHHHHHHhhccCCCCCCcChHHHHHHHHh----cccccHHHH
Confidence 6677777777776332 2 4445556666665555433211 1111100 01234444454443 22222222
Q ss_pred ---HHHHHHHHHhhcCHHHHHHHHhh-CCccccc-------c--hhhhhhcCCHHHHHHHHH
Q psy8417 255 ---KHVVRCYLRLSDNARAREALRQC-LPDQLRD-------S--TFSVCLNDDKSTKNWLAQ 303 (326)
Q Consensus 255 ---KhIIrCYlRLsdn~rar~aL~~~-LP~~Lrd-------~--tf~~~l~~D~~~k~wl~q 303 (326)
-+.++||. .+|+.++.++.+. +|....+ | -+..++..|| .+-|+.-
T Consensus 383 ~Aa~~cl~ay~--~~N~~~Q~~i~~~llp~~~~~~~~~~s~g~ll~~~l~s~d~-~~~wfAa 441 (651)
T 3grl_A 383 CAVLYCFQCFL--YKNQKGQGEIVSTLLPSTIDATGNTVSAGQLLCGGLFSTDS-LSNWCAA 441 (651)
T ss_dssp HHHHHHHHHHH--TTCHHHHHHHHHTTSSCCCCCTTSSSCHHHHHHHHHTSSCH-HHHHHHH
T ss_pred HHHHHHHHHHH--hCCHHHHHHHHHhcCCcccccCCCCCCcchhhhhhhccCch-HHHHHHH
Confidence 25678887 8999999888875 4655432 1 1233445566 5677554
No 55
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=36.71 E-value=1.9e+02 Score=25.73 Aligned_cols=144 Identities=10% Similarity=0.019 Sum_probs=96.9
Q ss_pred chhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHHhcc-cccchhhhcchhhhHHHHHH
Q psy8417 159 YLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLD-DSGLSYICQTYDRFSHVAMI 237 (326)
Q Consensus 159 ~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKIL~d-d~GL~YiC~T~eRF~aV~~v 237 (326)
.++....+.+.-|.+.++ +....+.....||...+.+.++++--|..|.-.+..|=.+ ++.-..+.. +-.
T Consensus 25 ~~q~~Aa~~l~~L~~~~~-~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk~~I~~--------~Ga 95 (233)
T 3tt9_A 25 SRISAAATFIQHECFQKS-EARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLEVAE--------LNG 95 (233)
T ss_dssp HHHHHHHHHHHHHHHHCH-HHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHH--------TTH
T ss_pred HHHHHHHHHHHHHHcCCc-HHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHH--------cCC
Confidence 566677777777776543 3444556777899999999999999999999999988664 333222222 124
Q ss_pred HHHHHHHHhhcCCchhHHHHHHHHHHhhcCHHHHHHHHh-hCCc---ccc---cchhh-h----hhcCCHHHHHHHHHHH
Q psy8417 238 LGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQ-CLPD---QLR---DSTFS-V----CLNDDKSTKNWLAQLI 305 (326)
Q Consensus 238 L~~mV~~l~~~ps~RLLKhIIrCYlRLsdn~rar~aL~~-~LP~---~Lr---d~tf~-~----~l~~D~~~k~wl~qLl 305 (326)
+-.+|.-|...++..+.+++...-.-||.++..|..+.+ .+|. .+. .|.-. . --..|+.++..-..-|
T Consensus 96 I~~Lv~lL~~~~~~~~~e~a~~aL~nLS~~~~~k~~i~~~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~v~~na~~~L 175 (233)
T 3tt9_A 96 VPRLLQVLKQTRDLETKKQITGLLWNLSSNDKLKNLMITEALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFYNVTGCL 175 (233)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHTSGGGHHHHHHHHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHcChhhHHHHHhccHHHHHHHHhccccCCcccccccccccchHHHHHHHHHHH
Confidence 555566555567889999999999999998888777654 3332 221 11100 0 0024778888888888
Q ss_pred HHhccc
Q psy8417 306 KNLESV 311 (326)
Q Consensus 306 ~nl~~~ 311 (326)
.|+...
T Consensus 176 ~nLss~ 181 (233)
T 3tt9_A 176 RNMSSA 181 (233)
T ss_dssp HHHTTS
T ss_pred HHHhcC
Confidence 888753
No 56
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=36.05 E-value=2.7e+02 Score=25.80 Aligned_cols=129 Identities=16% Similarity=0.203 Sum_probs=71.4
Q ss_pred ccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHHhcccccchhhhcchhhhHHHHH
Q psy8417 157 FEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAM 236 (326)
Q Consensus 157 fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKIL~dd~GL~YiC~T~eRF~aV~~ 236 (326)
...+|-+.+..+|.+++.-.++ +. ..+++|...+.++..+...+..|...+.++... .|- + .....
T Consensus 454 ~~~Vr~~a~~~l~~l~~~~~~~---~~-~~~llp~l~~~~~~~~~~~R~~a~~~l~~l~~~-~~~-------~--~~~~~ 519 (588)
T 1b3u_A 454 VYAIREAATSNLKKLVEKFGKE---WA-HATIIPKVLAMSGDPNYLHRMTTLFCINVLSEV-CGQ-------D--ITTKH 519 (588)
T ss_dssp SHHHHHHHHHHHHHHHHHHCHH---HH-HHHTHHHHHHTTTCSCHHHHHHHHHHHHHHHHH-HHH-------H--HHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCch---hH-HHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHh-cCH-------H--HHHHH
Confidence 4568888888888887754433 11 356777777766666666677777777665431 111 1 11122
Q ss_pred HHHHHHHHHhhcCCchhHHHHHHHHHHhhcCHHHH---HHHHhhCCcccccchhhhhh-cCCHHHHHHHHHHHHHhc
Q psy8417 237 ILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAR---EALRQCLPDQLRDSTFSVCL-NDDKSTKNWLAQLIKNLE 309 (326)
Q Consensus 237 vL~~mV~~l~~~ps~RLLKhIIrCYlRLsdn~rar---~aL~~~LP~~Lrd~tf~~~l-~~D~~~k~wl~qLl~nl~ 309 (326)
++. .+..+.+++.+.+=..+++|.-++...-... +.+...| ..++ ..|+.++.+-.+-+..++
T Consensus 520 ~~~-~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~p~l---------~~l~~d~d~~vr~~a~~al~~l~ 586 (588)
T 1b3u_A 520 MLP-TVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPIL---------EKLTQDQDVDVKYFAQEALTVLS 586 (588)
T ss_dssp THH-HHHHGGGCSCHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHH---------HHHTTCSSHHHHHHHHHHHHHTT
T ss_pred HHH-HHHhhCCCCCchHHHHHHHHHHHHHHHhchhhhHHHHHHHH---------HHHcCCCchhHHHHHHHHHHHhh
Confidence 222 2333456677777777777777777531110 1111111 1111 347888888777776664
No 57
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=32.15 E-value=3.7e+02 Score=26.33 Aligned_cols=60 Identities=12% Similarity=0.011 Sum_probs=33.0
Q ss_pred ccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHHhc
Q psy8417 157 FEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILL 216 (326)
Q Consensus 157 fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKIL~ 216 (326)
-+.+|.+++.++++++..-+...-..--..++++.....++.+.+-.|..|..++.+|..
T Consensus 194 ~~~vr~~al~~l~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~r~~a~~~l~~l~~ 253 (861)
T 2bpt_A 194 SKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMS 253 (861)
T ss_dssp CHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHccChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 567999999999987653221100000012234443444555566666667777776654
No 58
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=27.42 E-value=2.6e+02 Score=28.38 Aligned_cols=143 Identities=14% Similarity=0.063 Sum_probs=92.1
Q ss_pred chhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHHhcc--cccchhhhcchhhhHHHHH
Q psy8417 159 YLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLD--DSGLSYICQTYDRFSHVAM 236 (326)
Q Consensus 159 ~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKIL~d--d~GL~YiC~T~eRF~aV~~ 236 (326)
.++......+.-|.+.+ .+.-..+....-||...+.+.++++--|..|+-.|..|-.. +..-..+.. +.
T Consensus 63 ~~q~~Aa~~L~~La~~~-~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~--------~G 133 (584)
T 3l6x_A 63 AVKSNAAAYLQHLCYRN-DKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKN--------CD 133 (584)
T ss_dssp HHHHHHHHHHHHHHTTC-HHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHHHHHHHH--------TT
T ss_pred HHHHHHHHHHHHHHcCC-hHHHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHH--------cC
Confidence 34444555555555433 33445566778899999999999999999999999998763 343333332 23
Q ss_pred HHHHHHHHHhhcCCchhHHHHHHHHHHhhcCHHHHHHHHh-hCCcccc----------cchhhh-hh--cCCHHHHHHHH
Q psy8417 237 ILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQ-CLPDQLR----------DSTFSV-CL--NDDKSTKNWLA 302 (326)
Q Consensus 237 vL~~mV~~l~~~ps~RLLKhIIrCYlRLsdn~rar~aL~~-~LP~~Lr----------d~tf~~-~l--~~D~~~k~wl~ 302 (326)
.+-.+|.-|...++..+.+++..|-.-||.++..+..+.. .+|...+ ++.... -+ .+|+.+++.-.
T Consensus 134 aIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~~~~k~~I~~~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~~d~~V~~nAa 213 (584)
T 3l6x_A 134 GVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTA 213 (584)
T ss_dssp HHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGGGHHHHHHHTHHHHHHHTHHHHHCCC----------CCCCHHHHHHHH
T ss_pred CHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhccHHHHHHHHhcccccccccccccccccccccHHHHHHHH
Confidence 5666777776667889999999999999999887777643 3333211 000000 01 12566666666
Q ss_pred HHHHHhcc
Q psy8417 303 QLIKNLES 310 (326)
Q Consensus 303 qLl~nl~~ 310 (326)
-.|.||..
T Consensus 214 ~~L~NLs~ 221 (584)
T 3l6x_A 214 GCLRNVSS 221 (584)
T ss_dssp HHHHHHTS
T ss_pred HHHHHHhc
Confidence 67777754
No 59
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=26.50 E-value=2.8e+02 Score=23.14 Aligned_cols=208 Identities=13% Similarity=0.078 Sum_probs=113.8
Q ss_pred CCcchHHHHHHHHHhhcccCCChhhHhhhhhhhHHHHHHHHHhhcCCCCCCCCChhhhhhHHHHHHHHHHhhhchhhHHH
Q psy8417 55 SIPETRENALLELSKKREVVPDLAPMLWHSFGTIAALLQEIINIYPTINPATLTAHQSNRVCNALALLQCVASHQETRSL 134 (326)
Q Consensus 55 ~~p~~Re~AL~eLsk~re~~~dLa~~LW~S~Gtia~LLQEIisiYp~L~pp~Lt~~~SnRVCnaLaLLQcvAshpetR~~ 134 (326)
.+.+.|..|+.+|.+--+..+++.. ..++-+.-.|...+.- ....+-.-.++..+..+|.+. +..
T Consensus 27 ~~w~~R~~a~~~L~~l~~~~~~~~~---~~~~~i~~~L~~~l~k----------d~~~~V~~~a~~~l~~la~~l--~~~ 91 (242)
T 2qk2_A 27 KKWTLRKESLEVLEKLLTDHPKLEN---GEYGALVSALKKVITK----------DSNVVLVAMAGKCLALLAKGL--AKR 91 (242)
T ss_dssp SSHHHHHHHHHHHHHHHHHCSSBCC---CCCHHHHHHHHHHHHH----------CSCHHHHHHHHHHHHHHHHHH--GGG
T ss_pred CCHHHHHHHHHHHHHHHccCCCCCC---CCHHHHHHHHHHHhcc----------CCCHHHHHHHHHHHHHHHHHH--hhh
Confidence 4567799999999877665454321 2223333233332210 111222235666666777543 223
Q ss_pred HHhhcccccccccccccCCCCCccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHH
Q psy8417 135 FLAAHIPLFLYPFLHTTSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKI 214 (326)
Q Consensus 135 FL~A~iplyLyPfLnttsk~r~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKI 214 (326)
| ..+.+.++-+.+..-... -..+|-+....+.++++.-.. .+++|..+..++..+--.|.-+...+..+
T Consensus 92 ~-~~~~~~ilp~ll~~l~d~--~~~vr~~a~~aL~~~~~~~~~--------~~ll~~l~~~l~~~~~~vr~~~l~~l~~~ 160 (242)
T 2qk2_A 92 F-SNYASACVPSLLEKFKEK--KPNVVTALREAIDAIYASTSL--------EAQQESIVESLSNKNPSVKSETALFIARA 160 (242)
T ss_dssp G-HHHHHHHHHHHHHGGGCC--CHHHHHHHHHHHHHHHTTSCH--------HHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHcCCH--------HHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 3 445555555665543322 356888888888888875431 35788888888888777888888888877
Q ss_pred hcccccchhhhcchhh-hHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHhhcCHHHHHHHHhhCCcccccchhhhhhcC
Q psy8417 215 LLDDSGLSYICQTYDR-FSHVAMILGKMVISLEKDQSSRLLKHVVRCYLRLSDNARAREALRQCLPDQLRDSTFSVCLND 293 (326)
Q Consensus 215 L~dd~GL~YiC~T~eR-F~aV~~vL~~mV~~l~~~ps~RLLKhIIrCYlRLsdn~rar~aL~~~LP~~Lrd~tf~~~l~~ 293 (326)
+..-. ++. |..--..+-..+..+.+++.+++=+..+.|.-.+...-. +..|...+.+
T Consensus 161 l~~~~--------~~~~~~~~l~~l~p~l~~~l~D~~~~VR~~A~~~l~~l~~~vg--------------~~~~~~~l~~ 218 (242)
T 2qk2_A 161 LTRTQ--------PTALNKKLLKLLTTSLVKTLNEPDPTVRDSSAEALGTLIKLMG--------------DKAVTPLLAD 218 (242)
T ss_dssp HTTCC--------GGGCCHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHC--------------HHHHGGGGTT
T ss_pred HHHcC--------CCCccHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHcC--------------HHHHHHHHHh
Confidence 64421 111 111111222223333356666666666666665554332 1223333332
Q ss_pred -CHHHHHHHHHHHHHhcc
Q psy8417 294 -DKSTKNWLAQLIKNLES 310 (326)
Q Consensus 294 -D~~~k~wl~qLl~nl~~ 310 (326)
|+.-++-+.+.+.....
T Consensus 219 L~~~~~~~i~~~~~~a~v 236 (242)
T 2qk2_A 219 VDPLKMAKIKECQEKAEI 236 (242)
T ss_dssp SCHHHHHHHHHHHHHCCC
T ss_pred cCHHHHHHHHHHHHHHHH
Confidence 66777777777666554
No 60
>3bwt_A Protein PUF4; pumilio, RNA binding, HO endonuclease, transcription, RNA binding protein; 2.69A {Saccharomyces cerevisiae} PDB: 4dzs_A 3bx2_A 3bx3_A
Probab=26.43 E-value=84 Score=28.47 Aligned_cols=24 Identities=4% Similarity=0.223 Sum_probs=9.5
Q ss_pred hHHHHHHHHHHhhcCHHHHHHHHh
Q psy8417 253 LLKHVVRCYLRLSDNARAREALRQ 276 (326)
Q Consensus 253 LLKhIIrCYlRLsdn~rar~aL~~ 276 (326)
+++.+..-+..|+.++.+...+.+
T Consensus 152 i~~~l~~~~~~l~~~~~Gs~Vvq~ 175 (333)
T 3bwt_A 152 IFDAISDSCIDIATHRHGCCVLQR 175 (333)
T ss_dssp HHHHHHHSHHHHHTSTTHHHHHHH
T ss_pred HHHHHHHHHHHHhcCchhHHHHHH
Confidence 333333334444444433333333
No 61
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=25.73 E-value=2.9e+02 Score=23.05 Aligned_cols=89 Identities=12% Similarity=0.092 Sum_probs=53.7
Q ss_pred cchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhccccchhhHHHHHHHHHHhcccccchhhhcchhhhHHHHHH
Q psy8417 158 EYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDSGLSYICQTYDRFSHVAMI 237 (326)
Q Consensus 158 E~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~GsElSKtvAtfIlqKIL~dd~GL~YiC~T~eRF~aV~~v 237 (326)
-.+|-..+.++|.|.+.-.++.-.| -..++|..+..+...+...+.-|..-+..+...- + +..+
T Consensus 71 ~~V~~~a~~~l~~la~~l~~~~~~~--~~~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~-~-------------~~~l 134 (242)
T 2qk2_A 71 VVLVAMAGKCLALLAKGLAKRFSNY--ASACVPSLLEKFKEKKPNVVTALREAIDAIYAST-S-------------LEAQ 134 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGGHHH--HHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTS-C-------------HHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHH--HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcC-C-------------HHHH
Confidence 3467788888888887533333222 2458999998888777777777777777776531 1 1223
Q ss_pred HHHHHHHHhhcCCchhHHHHHHHHHH
Q psy8417 238 LGKMVISLEKDQSSRLLKHVVRCYLR 263 (326)
Q Consensus 238 L~~mV~~l~~~ps~RLLKhIIrCYlR 263 (326)
+..+...+ +++++++=..++..--+
T Consensus 135 l~~l~~~l-~~~~~~vr~~~l~~l~~ 159 (242)
T 2qk2_A 135 QESIVESL-SNKNPSVKSETALFIAR 159 (242)
T ss_dssp HHHHHHHT-TCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHH-cCCChHHHHHHHHHHHH
Confidence 33333333 34566655555555555
No 62
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=23.80 E-value=6.1e+02 Score=26.11 Aligned_cols=98 Identities=12% Similarity=0.154 Sum_probs=53.1
Q ss_pred hhHHHHHHHHHHhhhchhhHHHH-----HhhcccccccccccccCCC------------------CCccchhhhhhhhhh
Q psy8417 113 NRVCNALALLQCVASHQETRSLF-----LAAHIPLFLYPFLHTTSKT------------------RPFEYLRLTSLGVIG 169 (326)
Q Consensus 113 nRVCnaLaLLQcvAshpetR~~F-----L~A~iplyLyPfLnttsk~------------------r~fE~LRLtSLGVIg 169 (326)
.-++.++..+..+++++..+..| +..=+...+.|++..+... ..++..|-++...+.
T Consensus 307 ~~~~~al~fl~~~~~~~~~~~~~~~~~~l~~li~~~i~~~m~~~~~d~e~w~~dp~e~i~~d~e~~d~~s~R~aa~~~L~ 386 (960)
T 1wa5_C 307 ILVSKSLSFLTAVTRIPKYFEIFNNESAMNNITEQIILPNVTLREEDVELFEDDPIEYIRRDLEGSDTDTRRRACTDFLK 386 (960)
T ss_dssp HHHHHHHHHHHHHHTSHHHHGGGCSHHHHHHHHHHTHHHHHSCCGGGTTTTTTCHHHHHHHHHHC----CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHhHHHHHcCchHHHHHHHHHhHHhcCCCHHHHHHHhcCHHHHHHhccCcccccCcHHHHHHHHH
Confidence 34678999999999988876544 3333336777877533221 123456667777777
Q ss_pred hhhccchHHHHHHHHhhchhhhhhhhhc------cccchhhHHHHHHHHHHh
Q psy8417 170 ALVKTDEQEVITFLLTTEIIPLCLRIME------SGSELSKTVATFILQKIL 215 (326)
Q Consensus 170 aLvK~dd~evI~fLL~TEIiPLCLriME------~GsElSKtvAtfIlqKIL 215 (326)
.|.+....+++.- +++.+...+. ...=..|-.|.+.+.-|.
T Consensus 387 ~l~~~~~~~v~~~-----~l~~i~~~l~~~~~~~~~~w~~reaal~algaia 433 (960)
T 1wa5_C 387 ELKEKNEVLVTNI-----FLAHMKGFVDQYMSDPSKNWKFKDLYIYLFTALA 433 (960)
T ss_dssp HHHHHCHHHHHHH-----HHHHHHHHHHHHHC----CHHHHHHHHHHHHHHH
T ss_pred HHHHHcchhHHHH-----HHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHH
Confidence 7766655444322 2233333332 111145556666666664
No 63
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=22.80 E-value=6.9e+02 Score=26.31 Aligned_cols=41 Identities=22% Similarity=0.371 Sum_probs=31.0
Q ss_pred CccchhhhhhhhhhhhhccchHHHHHHHHhhchhhhhhhhhcc
Q psy8417 156 PFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMES 198 (326)
Q Consensus 156 ~fE~LRLtSLGVIgaLvK~dd~evI~fLL~TEIiPLCLriME~ 198 (326)
+-+.+|-+.+..++.+++.-..++-.|+ .+++|.+++.|..
T Consensus 267 ~~~~vR~~a~~~l~~l~~~~~~~~~~~l--~~li~~ll~~l~~ 307 (1230)
T 1u6g_C 267 DDDELREYCIQAFESFVRRCPKEVYPHV--STIINICLKYLTY 307 (1230)
T ss_dssp CCTTTHHHHHHHHHHHHHCTTCCCHHHH--HHHHHHHTTCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHChHHHHHhH--HHHHHHHHHHhCC
Confidence 3567899999999999887655555555 6789999988753
Done!