RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8421
(237 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 135 bits (341), Expect = 2e-38
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 6/211 (2%)
Query: 1 MIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNIT 60
+A++ G HL ++K L+ GA N S TPL A G ++ KYL+++ A +N
Sbjct: 5 HVASFMG--HLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAK 62
Query: 61 NHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIE 120
+ + L AA GH +++K L+ A+ N +T TPL A +G ++ V L+E
Sbjct: 63 AKDDQTPLHCAARI--GHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLE 120
Query: 121 HGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRL 180
A + L +AA G + V + L+ A N + K TPL A + L
Sbjct: 121 KEASQACMTKKGFTPLHVAAKY--GKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNL 178
Query: 181 DIVKYLIEHGADLNITNHYNNSCLMIAAYKG 211
DIVK L+ G + + L IAA +
Sbjct: 179 DIVKLLLPRGGSPHSPAWNGYTPLHIAAKQN 209
Score = 127 bits (320), Expect = 2e-35
Identities = 57/179 (31%), Positives = 84/179 (46%), Gaps = 4/179 (2%)
Query: 33 TPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADV 92
TPL A + G L IVK L++ GA N++N + L +AA GH V K L+ A V
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARA--GHTEVAKYLLQNKAKV 59
Query: 93 NHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKT 152
N K TPL A G ++VK L+E+ A+ N+ ++ L IAA +G +
Sbjct: 60 NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVE--TVLA 117
Query: 153 LVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKG 211
L+ A TK TPL A G++ + + L+E A N + L +A +
Sbjct: 118 LLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHN 176
Score = 118 bits (297), Expect = 4e-32
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 6/211 (2%)
Query: 1 MIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNIT 60
+A + +L ++K L+ G + TPL A ++++ + L+++G N
Sbjct: 170 HVAVHHN--NLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAE 227
Query: 61 NHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIE 120
+ + L +AA +G H ++ L+ A+ N K+ TPL +G + + LI+
Sbjct: 228 SVQGVTPLHLAAQEG--HAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIK 285
Query: 121 HGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRL 180
HG ++ T + L + G++ ++K L+ ADVN TK +PL A G
Sbjct: 286 HGVMVDATTRMGYTPLHV--ASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHT 343
Query: 181 DIVKYLIEHGADLNITNHYNNSCLMIAAYKG 211
DIV L+++GA N + + L IA G
Sbjct: 344 DIVTLLLKNGASPNEVSSDGTTPLAIAKRLG 374
Score = 99.3 bits (246), Expect = 6e-25
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 7/194 (3%)
Query: 9 GHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCL 68
+ V ++L+ G N + TPL A +G ++V L+ A+ N+ N + L
Sbjct: 209 NQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPL 268
Query: 69 MIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNIT 128
+ A +G H+ V L+ G V+ +T+ TPL A + G + +VK+L++H AD+N
Sbjct: 269 HLVAQEG--HVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAK 326
Query: 129 NHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYL-- 186
S L AA +G H ++ L+ GA N + +TPL A G + + L
Sbjct: 327 TKLGYSPLHQAAQQG--HTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKV 384
Query: 187 -IEHGADLNITNHY 199
+ + + +++ +
Sbjct: 385 VTDETSFVLVSDKH 398
Score = 92.0 bits (227), Expect = 3e-22
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 1 MIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNIT 60
+AA +G H ++ L+ A+ N K+ TPL +G + + LI+HG ++ T
Sbjct: 236 HLAAQEG--HAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDAT 293
Query: 61 NHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIE 120
+ L + G++ ++K L+ ADVN TK +PL A G DIV L++
Sbjct: 294 TRMGYTPLHV--ASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLK 351
Query: 121 HGADLNITNHYNNSCLMIAAYKGAGHLSVIKTL 153
+GA N + + L IA G++SV L
Sbjct: 352 NGASPNEVSSDGTTPLAIAKRL--GYISVTDVL 382
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 108 bits (270), Expect = 1e-28
Identities = 31/234 (13%), Positives = 59/234 (25%), Gaps = 23/234 (9%)
Query: 1 MIAAYKG-AGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNI 59
+AA G + L + L+ + V R A +G L ++ L E +
Sbjct: 95 FVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM 154
Query: 60 TNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQ---STPLRAACYDGRLDIVK 116
+ GHL V+ L + AA G +++
Sbjct: 155 AMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVIN 214
Query: 117 YLIEHGADLNITNHY-----NNSCLMIAAYKGAGHLSVIKTLVHAGA---------DVNH 162
+L++ L + A + +
Sbjct: 215 FLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECL 274
Query: 163 STKTQSTPLRAACYDGRLDIVKYLIEHGADLNI-----TNHYNNSCLMIAAYKG 211
L + LD +++L+ + N L +A G
Sbjct: 275 QGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLG 328
Score = 94.6 bits (234), Expect = 1e-23
Identities = 30/216 (13%), Positives = 54/216 (25%), Gaps = 19/216 (8%)
Query: 2 IAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKY---LIEHGADLN 58
+ + + +D + A G + L+ +
Sbjct: 61 VRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVK 120
Query: 59 ITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQ--STPLRAACYDGRLDIVK 116
+ N +AA GHL V+ L + R A +G L ++
Sbjct: 121 VIQAENYQAFRLAAEN--GHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLN 178
Query: 117 YLIEHGADLNITN-HYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAAC 175
L E N A G GH +VI L+ +
Sbjct: 179 RLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLA-------YAEIHEF 231
Query: 176 YDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKG 211
G + ++ H L + ++ G
Sbjct: 232 EYGEKYVNPFIARHVNRLK----EMHDAFKLSNPDG 263
Score = 84.2 bits (207), Expect = 1e-19
Identities = 35/227 (15%), Positives = 56/227 (24%), Gaps = 42/227 (18%)
Query: 1 MIAAYKGAGHLSVIKTLVHAGADVNHSTKTQ--STPLRAACYDGRLDIVKYLIEHGADLN 58
+AA G HL V+ L + R A +G L ++ L E
Sbjct: 131 RLAAENG--HLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEA 188
Query: 59 ITN-HYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKY 117
N A G GH +VI L+ + G + +
Sbjct: 189 TAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLA-------YAEIHEFEYGEKYVNPF 241
Query: 118 LIEHGA-----------------------DLNITNHYNNSCLMIAAYKGAGHLSVIKTLV 154
+ H + Y L+ + L I+ L+
Sbjct: 242 IARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEV--LLDDIRFLL 299
Query: 155 HAGAD-----VNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNIT 196
+ LR A G L+ + L +T
Sbjct: 300 SIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLALT 346
Score = 72.6 bits (177), Expect = 1e-15
Identities = 26/188 (13%), Positives = 51/188 (27%), Gaps = 26/188 (13%)
Query: 25 NHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKT 84
N LR + ++ ++ I +L++ + I V +
Sbjct: 6 NIENYENDPQLRLIPWILWENLFQHFIS-ANELSLMTLSYKEAIHIFLPGTKNMEQVRQL 64
Query: 85 LVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKG- 143
L A N + + +D + + +AA G
Sbjct: 65 LCLYYAHYN----------------------RNAKQLWSDAHKKGIKSEVICFVAAITGC 102
Query: 144 AGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITN--HYNN 201
+ L + L+ + V R A +G L ++ L E + N
Sbjct: 103 SSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENY 162
Query: 202 SCLMIAAY 209
+AA
Sbjct: 163 HAFRLAAE 170
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 104 bits (260), Expect = 4e-28
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 5/215 (2%)
Query: 1 MIAAYKGAGHLSVIKTLVHA-GADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNI 59
M+ +G L +K + A + + + T L AC G +IV++L++ G +N
Sbjct: 6 MVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND 65
Query: 60 TNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLI 119
+ S L IAA G ++K L+ GA VN + TPL A R +I L+
Sbjct: 66 KDDAGWSPLHIAASAGRDE--IVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLL 123
Query: 120 EHGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGR 179
E GA+ + +HY + + AA K G+L +I L++ A N +TPL AC + R
Sbjct: 124 EGGANPDAKDHYEATAMHRAAAK--GNLKMIHILLYYKASTNIQDTEGNTPLHLACDEER 181
Query: 180 LDIVKYLIEHGADLNITNHYNNSCLMIAAYKGIDV 214
++ K L+ GA + I N + L +A +
Sbjct: 182 VEEAKLLVSQGASIYIENKEEKTPLQVAKGGLGLI 216
Score = 68.5 bits (166), Expect = 1e-14
Identities = 36/142 (25%), Positives = 54/142 (38%), Gaps = 32/142 (22%)
Query: 10 HLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLM 69
++K L+ GA VN + TPL A R +I L+E GA+ + +HY + +
Sbjct: 82 RDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMH 141
Query: 70 IAAYKGA-------------------------------GHLSVIKTLVHAGADVNHSTKT 98
AA KG + K LV GA + K
Sbjct: 142 RAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKE 201
Query: 99 QSTPLRAACYDGRLDIVKYLIE 120
+ TPL+ A G I+K ++E
Sbjct: 202 EKTPLQVAKG-GLGLILKRMVE 222
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 100 bits (249), Expect = 5e-26
Identities = 56/257 (21%), Positives = 97/257 (37%), Gaps = 48/257 (18%)
Query: 1 MIAAYKGAGHLSVIKTLVHAGADVNHST-KTQSTPLRAACYDGRLDIVKYLI-------- 51
+ A + +++ L+ GA+VN + TPL A R DIV+ L+
Sbjct: 10 IKAVQNE--DVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL 67
Query: 52 -------------------------EHGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLV 86
GAD+N + Y + M AA G
Sbjct: 68 RKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR 127
Query: 87 HAGAD--------VNHSTKTQSTPLRAACYDGRLDIVKYLIEH-GADLNITNHYNNSCLM 137
A + K +T L A G ++++K L++ GAD+N ++ + L+
Sbjct: 128 GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALI 187
Query: 138 IA--AYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEH-GADLN 194
A + + ++ L+ GADVN + TPL A L +V+ L+E ++N
Sbjct: 188 HALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN 247
Query: 195 ITNHYNNSCLMIAAYKG 211
T+ + L++A
Sbjct: 248 DTDSDGKTALLLAVELK 264
Score = 95.8 bits (237), Expect = 2e-24
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 9 GHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNN--- 65
G + ++K + GADVN T A G++ +K+L + GA++N+
Sbjct: 83 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQE 142
Query: 66 -------SCLMIAAYKGAGHLSVIKTLV-HAGADVNHSTK----TQSTPLRAACYDGRLD 113
+ LM AA KG H+ V+K L+ GADVN L ++
Sbjct: 143 RLRKGGATALMDAAEKG--HVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEA 200
Query: 114 IVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLV-HAGADVNHSTKTQSTPLR 172
I L++HGAD+N+ + L++A K HL +++ L+ ++N + T L
Sbjct: 201 ITHLLLDHGADVNVRGERGKTPLILAVEKK--HLGLVQRLLEQEHIEINDTDSDGKTALL 258
Query: 173 AACYDGRLDIVKYLIEHGADLNITN 197
A I + L + GA + +
Sbjct: 259 LAVELKLKKIAELLCKRGASTDCGD 283
Score = 87.3 bits (215), Expect = 3e-21
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 10/135 (7%)
Query: 1 MIAAYKGAGHLSVIKTLV-HAGADVNHSTK----TQSTPLRAACYDGRLDIVKYLIEHGA 55
M AA KG H+ V+K L+ GADVN L ++ I L++HGA
Sbjct: 153 MDAAEKG--HVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGA 210
Query: 56 DLNITNHYNNSCLMIAAYKGAGHLSVIKTLV-HAGADVNHSTKTQSTPLRAACYDGRLDI 114
D+N+ + L++A K HL +++ L+ ++N + T L A I
Sbjct: 211 DVNVRGERGKTPLILAVEKK--HLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKI 268
Query: 115 VKYLIEHGADLNITN 129
+ L + GA + +
Sbjct: 269 AELLCKRGASTDCGD 283
Score = 80.0 bits (196), Expect = 2e-18
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 12/183 (6%)
Query: 33 TPLRAACYDGRLDIVKYLIEHGADLNI-TNHYNNSCLMIAAYKGAGHLSVIKTLVHAGAD 91
L A + +D+V+ L+E GA++N + L A +++ L+ GAD
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQM--SREDIVELLLRHGAD 64
Query: 92 VNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIK 151
K +TP A G + ++K + GAD+N + Y + M AA G
Sbjct: 65 PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFL 124
Query: 152 TLVHAGAD--------VNHSTKTQSTPLRAACYDGRLDIVKYLIEH-GADLNITNHYNNS 202
A + K +T L A G ++++K L++ GAD+N ++ +
Sbjct: 125 YKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN 184
Query: 203 CLM 205
L+
Sbjct: 185 ALI 187
Score = 45.3 bits (106), Expect = 2e-06
Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 169 TPLRAACYDGRLDIVKYLIEHGADLNI-TNHYNNSCLMIAAYKG 211
L A + +D+V+ L+E GA++N + L A
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMS 50
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 95.1 bits (235), Expect = 6e-24
Identities = 41/213 (19%), Positives = 72/213 (33%), Gaps = 17/213 (7%)
Query: 13 VIKTLVHAGADVNHST-KTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIA 71
V + ++N + +TPL L++VK+L++HG++ ++ SCL+ A
Sbjct: 88 VNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKA 147
Query: 72 AYKGAGH--LSVIKTLVHAGADVNHSTKTQSTPLRAACYDGR-----------LDIVKYL 118
+ + L + + T L LDI+
Sbjct: 148 VKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGW 207
Query: 119 IEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLVH---AGADVNHSTKTQSTPLRAAC 175
I + I + N G S+++ L +N T L A
Sbjct: 208 IVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAA 267
Query: 176 YDGRLDIVKYLIEHGADLNITNHYNNSCLMIAA 208
G + IV L+++GAD I N + A
Sbjct: 268 RLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300
Score = 60.1 bits (144), Expect = 2e-11
Identities = 30/191 (15%), Positives = 49/191 (25%), Gaps = 53/191 (27%)
Query: 1 MIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACY-------------------- 40
+L ++K LV G++ + + L A
Sbjct: 112 HWLTSIA--NLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC 169
Query: 41 ----------------------------DGRLDIVKYLIEHGADLNITNHYNNSCLMIAA 72
LDI+ I + I + N
Sbjct: 170 LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPND 229
Query: 73 YKGAGHLSVIKTLVH---AGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITN 129
G S+++ L +N T L A G + IV L+++GAD I N
Sbjct: 230 KNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIAN 289
Query: 130 HYNNSCLMIAA 140
+ A
Sbjct: 290 KSGLRPVDFGA 300
Score = 54.7 bits (130), Expect = 2e-09
Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 2/133 (1%)
Query: 79 LSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMI 138
L ++K L + N L+ + ++ L ++ N +N
Sbjct: 19 LKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQH 78
Query: 139 AAYKGAGHLSVIKTLVHAGADVNHST-KTQSTPLRAACYDGRLDIVKYLIEHGADLNITN 197
++ V + ++N + +TPL L++VK+L++HG++ +
Sbjct: 79 VSFDSLLQ-EVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGD 137
Query: 198 HYNNSCLMIAAYK 210
+ SCL+ A
Sbjct: 138 NMGESCLVKAVKS 150
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 90.9 bits (224), Expect = 2e-22
Identities = 54/240 (22%), Positives = 92/240 (38%), Gaps = 33/240 (13%)
Query: 1 MIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNIT 60
+ A G + L+ GAD+N++ T L AC D +D+VK+L+E+GA++N
Sbjct: 45 LAACSSG--DTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQP 102
Query: 61 NHYNNSCLMIAAYKGAGHLSVIKTLVHAGA---------------------------DVN 93
++ L AA G + + L+ GA +VN
Sbjct: 103 DNEGWIPLHAAASCGYLD--IAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVN 160
Query: 94 HSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKTL 153
+ D ++L + + L +AA KG + V+K L
Sbjct: 161 RQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKG--YTEVLKLL 218
Query: 154 VHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGID 213
+ A DVN TPL AA + G+ + + L+E+ D+ N + +A +
Sbjct: 219 IQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILG 278
Score = 77.8 bits (190), Expect = 1e-17
Identities = 53/205 (25%), Positives = 80/205 (39%), Gaps = 27/205 (13%)
Query: 32 STPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGAD 91
AAC G + V L+E GAD+N N + L A ++ ++K LV GA+
Sbjct: 41 GAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACID--DNVDMVKFLVENGAN 98
Query: 92 VNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGA------- 144
+N PL AA G LDI +YLI GA + N ++ L IA +
Sbjct: 99 INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE 158
Query: 145 ------------------GHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYL 186
+ L + K+ T L A G +++K L
Sbjct: 159 VNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL 218
Query: 187 IEHGADLNITNHYNNSCLMIAAYKG 211
I+ D+NI ++ + L AA+ G
Sbjct: 219 IQARYDVNIKDYDGWTPLHAAAHWG 243
Score = 77.1 bits (188), Expect = 2e-17
Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 2/127 (1%)
Query: 25 NHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKT 84
N + D ++L + + L +AA KG + V+K
Sbjct: 160 NRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKG--YTEVLKL 217
Query: 85 LVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGA 144
L+ A DVN TPL AA + G+ + + L+E+ D+ N + +A
Sbjct: 218 LIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDIL 277
Query: 145 GHLSVIK 151
G+L ++
Sbjct: 278 GYLEELQ 284
Score = 71.7 bits (174), Expect = 2e-15
Identities = 21/75 (28%), Positives = 36/75 (48%)
Query: 9 GHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCL 68
G+ V+K L+ A DVN TPL AA + G+ + + L+E+ D+ N +
Sbjct: 210 GYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAF 269
Query: 69 MIAAYKGAGHLSVIK 83
+A G+L ++
Sbjct: 270 DVADEDILGYLEELQ 284
Score = 69.0 bits (167), Expect = 2e-14
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 6/120 (5%)
Query: 10 HLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLM 69
+ L + K+ T L A G +++K LI+ D+NI ++ + L
Sbjct: 178 LRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLH 237
Query: 70 IAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITN 129
AA+ G + LV D+ K T A D I+ YL E N+ +
Sbjct: 238 AAAHWG--KEEACRILVENLCDMEAVNKVGQTAFDVADED----ILGYLEELQKKQNLLH 291
Score = 42.8 bits (99), Expect = 2e-05
Identities = 15/61 (24%), Positives = 21/61 (34%), Gaps = 6/61 (9%)
Query: 1 MIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNIT 60
AA+ G + LV D+ K T A D I+ YL E N+
Sbjct: 237 HAAAHWG--KEEACRILVENLCDMEAVNKVGQTAFDVADED----ILGYLEELQKKQNLL 290
Query: 61 N 61
+
Sbjct: 291 H 291
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 88.3 bits (217), Expect = 4e-22
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 4/200 (2%)
Query: 13 VIKTLVHAGADVNHST-KTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIA 71
VI L+ GA++N + KT T L A R D K L++ GAD N ++ + L A
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63
Query: 72 AYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHY 131
A + I + ++N +TPL A +V+ LI AD+N ++
Sbjct: 64 VAADAMGVFQILL-RNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 122
Query: 132 NNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGA 191
+ L AA + L+ A+ + TPL A +G + K L+++ A
Sbjct: 123 GKTALHWAAAVNNTE--AVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFA 180
Query: 192 DLNITNHYNNSCLMIAAYKG 211
+ IT+H + +A+ +
Sbjct: 181 NREITDHMDRLPRDVASERL 200
Score = 62.9 bits (151), Expect = 1e-12
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 4/129 (3%)
Query: 25 NHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKT 84
N +TPL A +V+ LI AD+N ++ + L AA +
Sbjct: 84 NARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTE--AVNI 141
Query: 85 LVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGA 144
L+ A+ + TPL A +G + K L+++ A+ IT+H + +A+ +
Sbjct: 142 LLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASER-- 199
Query: 145 GHLSVIKTL 153
H +++ L
Sbjct: 200 LHHDIVRLL 208
Score = 52.5 bits (124), Expect = 5e-09
Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 9 GHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCL 68
+ + L+ A+ + TPL A +G + K L+++ A+ IT+H +
Sbjct: 134 NNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPR 193
Query: 69 MIAAYKGAGHLSVIKTL 85
+A+ + H +++ L
Sbjct: 194 DVASER--LHHDIVRLL 208
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 83.2 bits (204), Expect = 6e-20
Identities = 33/236 (13%), Positives = 59/236 (25%), Gaps = 51/236 (21%)
Query: 25 NHSTKTQSTPLRAACYDGRLDIVKYLIEHGAD---LNITNHYNNSCLMIAAYKGAGHLSV 81
+ T+ T L A + +L+ A L++ N + L +AA G S
Sbjct: 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILG--EAST 60
Query: 82 IKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNIT------------N 129
++ L AGA V + + T L AC L++
Sbjct: 61 VEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCT 120
Query: 130 HYNNSCLMIAAYKGAGHLSVIKTLVHAGADVN---------------------------- 161
+ + +
Sbjct: 121 PDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDA 180
Query: 162 ------HSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKG 211
TPL A +++ L++ GAD + + L A +
Sbjct: 181 GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRP 236
Score = 77.4 bits (189), Expect = 1e-17
Identities = 35/243 (14%), Positives = 62/243 (25%), Gaps = 53/243 (21%)
Query: 1 MIAAYKGAGHLSVIKTLVHAGAD---VNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADL 57
+A H + L+ A ++ T L A G V+ L GA +
Sbjct: 14 HLAVIHQ--HEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV 71
Query: 58 NITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTP--------------L 103
+ ++ L +A + L+
Sbjct: 72 LVAERGGHTALHLACRVR--AHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAA 129
Query: 104 RAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKG-------------------- 143
+ + + + L N+ ++ L +A
Sbjct: 130 VDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEP 189
Query: 144 ------------AGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGA 191
A SV++ L+ AGAD TPL +A + + L HGA
Sbjct: 190 TCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249
Query: 192 DLN 194
Sbjct: 250 PEP 252
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 79.1 bits (193), Expect = 1e-18
Identities = 49/218 (22%), Positives = 96/218 (44%), Gaps = 9/218 (4%)
Query: 1 MIAAYKGAGHLSVIKTLV----HAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGAD 56
IA +G +L + LV G +++ + TPL A +V+ L+ GA
Sbjct: 8 HIAVVQG--NLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS 65
Query: 57 LNITNHYNNSCLMIAAYKG--AGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDI 114
+ + + +A +++ + D+ T L A +
Sbjct: 66 PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQET 125
Query: 115 VKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAA 174
V+ L+E GAD++ + + +I A + S+++ L+ GA+VN + S+ L +A
Sbjct: 126 VQLLLERGADIDAVDIKSGRSPLIHAVENNSL-SMVQLLLQHGANVNAQMYSGSSALHSA 184
Query: 175 CYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGI 212
G L +V+ L+ GAD ++ N +N++ LM+A + +
Sbjct: 185 SGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRV 222
Score = 55.6 bits (132), Expect = 4e-10
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 17 LVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGA 76
L K+ +PL A + L +V+ L++HGA++N + +S L A+ +G
Sbjct: 130 LERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRG- 188
Query: 77 GHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVK 116
L +++TLV +GAD + TPL A +DI++
Sbjct: 189 -LLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 42.1 bits (97), Expect = 2e-05
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 1 MIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVK 48
A+ +G L +++TLV +GAD + TPL A +DI++
Sbjct: 182 HSASGRG--LLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 77.5 bits (189), Expect = 1e-17
Identities = 42/258 (16%), Positives = 87/258 (33%), Gaps = 57/258 (22%)
Query: 8 AGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEH--------GADLNI 59
AG ++ + + ++ + T L + + + LI H GAD+N
Sbjct: 11 AGSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNA 69
Query: 60 TNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLI 119
+ N+ LM+A ++ L+ AGAD K++ + L A + ++ Y++
Sbjct: 70 MDCDENTPLMLAVLAR--RRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYML 127
Query: 120 EHGADLNITNHYNNS---CLMIAAYKGAGHL----------------------------- 147
+ + LMI A+
Sbjct: 128 NSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKG 187
Query: 148 --------------SVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADL 193
V + G++ + + TP+ A +GR+++V YLI+ GA +
Sbjct: 188 RTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASV 247
Query: 194 NITNHYNNSCLMIAAYKG 211
+ +++ +A
Sbjct: 248 EAVDATDHTARQLAQANN 265
Score = 62.4 bits (150), Expect = 3e-12
Identities = 42/242 (17%), Positives = 71/242 (29%), Gaps = 58/242 (23%)
Query: 1 MIAAYKGAGHLSVIKTLVH--------AGADVNHSTKTQSTPLRAACY------------ 40
A + L+ AGADVN ++TPL A
Sbjct: 38 HWIASNS--SAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMK 95
Query: 41 ---------------------DGRLDIVKYLIEHGADLNITNHYNNS---CLMIAAYKGA 76
+ ++ Y++ + + LMI A+
Sbjct: 96 AGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEG 155
Query: 77 GHLSVIKTL---------VHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIE-HGADLN 126
L A + T L A + IVKYL+ G++ +
Sbjct: 156 RDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKD 215
Query: 127 ITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYL 186
+ + +M+AA +G + V+ L+ GA V T T + A + +IV
Sbjct: 216 KQDEDGKTPIMLAAQEG--RIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIF 273
Query: 187 IE 188
Sbjct: 274 DR 275
Score = 46.3 bits (108), Expect = 9e-07
Identities = 39/234 (16%), Positives = 71/234 (30%), Gaps = 58/234 (24%)
Query: 33 TPLR-AACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLVH---- 87
+P++ G I + + ++ H N + L A + L+
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESVNIIDPRH-NRTVLHWIASN--SSAEKSEDLIVHEAK 58
Query: 88 ----AGADVNHSTKTQSTPLRAACY---------------------------------DG 110
AGADVN ++TPL A +
Sbjct: 59 ECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANR 118
Query: 111 RLDIVKYLIEHGA---DLNITNHYNNSCLMIAAYKGAGHLSVIKTL---------VHAGA 158
++ Y++ D+ + + LMI A+ L A
Sbjct: 119 DFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAA 178
Query: 159 DVNHSTKTQSTPLRAACYDGRLDIVKYLIE-HGADLNITNHYNNSCLMIAAYKG 211
+ T L A + IVKYL+ G++ + + + +M+AA +G
Sbjct: 179 RKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEG 232
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 67.6 bits (163), Expect = 7e-15
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 5/154 (3%)
Query: 33 TPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADV 92
L A G+ D V+ L+ +GA + + A Y V+
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGV---SR 60
Query: 93 NHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKT 152
+ TK TPL A +G +IV+ L++HGAD+N + + L A H V++
Sbjct: 61 DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEH--NHQEVVEL 118
Query: 153 LVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYL 186
L+ GADV+ +K T + +G D+ + L
Sbjct: 119 LIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 55.6 bits (132), Expect = 2e-10
Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 30/141 (21%)
Query: 101 TPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLS------------ 148
L A G+ D V+ L+ +GA + + A Y
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63
Query: 149 ------------------VIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHG 190
+++ L+ GADVN + T L A ++V+ LI++G
Sbjct: 64 TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123
Query: 191 ADLNITNHYNNSCLMIAAYKG 211
AD++ + + + I+ G
Sbjct: 124 ADVHTQSKFCKTAFDISIDNG 144
Score = 53.3 bits (126), Expect = 1e-09
Identities = 33/153 (21%), Positives = 59/153 (38%), Gaps = 7/153 (4%)
Query: 1 MIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNIT 60
+ AA G ++ L+ GA S AA Y L + T
Sbjct: 7 LEAARAG--QDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDART 64
Query: 61 NHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIE 120
M A+ H ++++ L+ GADVN + T L A ++V+ LI+
Sbjct: 65 KVDRTPLHMAASEG---HANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIK 121
Query: 121 HGADLNITNHYNNSCLMIAAYKGAGHLSVIKTL 153
+GAD++ + + + I+ G+ + + L
Sbjct: 122 YGADVHTQSKFCKTAFDISIDN--GNEDLAEIL 152
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 65.2 bits (157), Expect = 2e-13
Identities = 41/217 (18%), Positives = 87/217 (40%), Gaps = 8/217 (3%)
Query: 1 MIAAYKGAGHLSVIKTLVHA-GADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNI 59
A + ++ L+H+ + + + PL + +I +L+ ++N+
Sbjct: 5 HQACMEN--EFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 62
Query: 60 TNHYNNSCLMIAAYKGAGHLSVIKTLVHA---GADVNHSTKTQSTPLRAACYDGRLDIVK 116
++ ++S + + ++ D+N T T L A ++ +
Sbjct: 63 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 122
Query: 117 YLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACY 176
+LIE+GA + I + +N L AA G+ L + + VN K TPL A
Sbjct: 123 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLC-GLGKSAVNWQDKQGWTPLFHALA 181
Query: 177 DGRLDIVKYLIE-HGADLNITNHYNNSCLMIAAYKGI 212
+G D L+E +GA+ ++ ++ +A + +
Sbjct: 182 EGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQV 218
Score = 43.3 bits (100), Expect = 8e-06
Identities = 8/44 (18%), Positives = 14/44 (31%), Gaps = 1/44 (2%)
Query: 169 TPLRAACYDGRLDIVKYLIE-HGADLNITNHYNNSCLMIAAYKG 211
PL AC + V+ L+ + L + L +
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQ 45
Score = 42.1 bits (97), Expect = 2e-05
Identities = 25/117 (21%), Positives = 41/117 (35%), Gaps = 7/117 (5%)
Query: 10 HLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGAD-LNITNHYNNSCL 68
V + L+ GA V K PL A G L +++ L G +N + + L
Sbjct: 117 WFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPL 176
Query: 69 MIAAYKGAGHLSVIKTLV-HAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGAD 124
A +G H LV GA+ + + A + K+ + + D
Sbjct: 177 FHALAEG--HGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVVD 228
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 61.8 bits (148), Expect = 3e-12
Identities = 26/186 (13%), Positives = 51/186 (27%), Gaps = 7/186 (3%)
Query: 33 TPLRAACYDGR----LDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLVHA 88
+ L A +++++ + A LN N+ + L +A ++
Sbjct: 4 SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC 63
Query: 89 GADVNHSTKTQSTPLRAACYDGRLDIV---KYLIEHGADLNITNHYNNSCLMIAAYKGAG 145
++ L V H + +YN + A
Sbjct: 64 DPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY 123
Query: 146 HLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLM 205
V + T L A D+V L++ GAD+N + S
Sbjct: 124 LGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQ 183
Query: 206 IAAYKG 211
+ +
Sbjct: 184 LTWGRP 189
Score = 61.1 bits (146), Expect = 5e-12
Identities = 46/199 (23%), Positives = 78/199 (39%), Gaps = 9/199 (4%)
Query: 1 MIAAYKG--AGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLN 58
+A A + VI+ + A +N Q TPL A + +I + L+ G D
Sbjct: 7 HLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPE 66
Query: 59 ITNHYNNSCLMIAAYKGAGHLSVIK----TLVHAGADVNHSTKTQSTPLRAACYDGRLDI 114
+ + N+ L +A +G + T H + + + T L A G L I
Sbjct: 67 LRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGI 126
Query: 115 VKYLIEHGADLNITNHYN-NSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRA 173
V+ L+ GAD+N N + L +A + ++ L+ GADVN T +P +
Sbjct: 127 VELLVSLGADVNAQEPCNGRTALHLAVDLQ--NPDLVSLLLKCGADVNRVTYQGYSPYQL 184
Query: 174 ACYDGRLDIVKYLIEHGAD 192
I + L + +
Sbjct: 185 TWGRPSTRIQQQLGQLTLE 203
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 59.9 bits (143), Expect = 5e-12
Identities = 34/158 (21%), Positives = 65/158 (41%), Gaps = 4/158 (2%)
Query: 33 TPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADV 92
L +A G L+ + L+++ ++N N + + L + + +
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGA---NP 59
Query: 93 NHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKT 152
+ +T + A G LD ++ L+E AD+NI ++ N L +AA +G V
Sbjct: 60 DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLR-VVEFL 118
Query: 153 LVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHG 190
+ H ++V H T A GR ++V + +G
Sbjct: 119 VKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 40.3 bits (92), Expect = 4e-05
Identities = 8/37 (21%), Positives = 18/37 (48%)
Query: 169 TPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLM 205
L +A G L+ + L+++ ++N N + + L
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQ 39
Score = 38.3 bits (87), Expect = 2e-04
Identities = 18/157 (11%), Positives = 39/157 (24%), Gaps = 6/157 (3%)
Query: 1 MIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNIT 60
AA +G L + +L+ +VN T L+ + L+
Sbjct: 6 ASAAARG--DLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLKD 63
Query: 61 NHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIE 120
A L + ++ + +
Sbjct: 64 RTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAA--KEGHLRVVEFLVKH 121
Query: 121 HGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLVHAG 157
+++ NH ++ +A G V+ + G
Sbjct: 122 TASNVGHRNHKGDTACDLARLY--GRNEVVSLMQANG 156
Score = 35.2 bits (79), Expect = 0.002
Identities = 14/142 (9%), Positives = 35/142 (24%), Gaps = 31/142 (21%)
Query: 101 TPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLVHAG--- 157
L +A G L+ + L+++ ++N N + + L + +
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62
Query: 158 ----------------------------ADVNHSTKTQSTPLRAACYDGRLDIVKYLIEH 189
+ AA + +
Sbjct: 63 DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122
Query: 190 GADLNITNHYNNSCLMIAAYKG 211
+++ NH ++ +A G
Sbjct: 123 ASNVGHRNHKGDTACDLARLYG 144
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 59.4 bits (142), Expect = 8e-12
Identities = 33/158 (20%), Positives = 62/158 (39%), Gaps = 7/158 (4%)
Query: 33 TPLRAACYDGRLDIVKYLIE-HGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGAD 91
L A G + V+ L+ + N + + L + + +
Sbjct: 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGA---S 60
Query: 92 VNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIK 151
N + ++P+ A G LD +K L+EHGAD+N+ + + +A + + +
Sbjct: 61 PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQE---GHTAVV 117
Query: 152 TLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEH 189
+ + A +D++ TPL A G D+V L H
Sbjct: 118 SFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155
Score = 37.5 bits (85), Expect = 4e-04
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 19 HAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEH 53
A +D++ TPL A G D+V L H
Sbjct: 121 AAESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155
Score = 36.3 bits (82), Expect = 0.001
Identities = 30/145 (20%), Positives = 56/145 (38%), Gaps = 7/145 (4%)
Query: 68 LMIAAYKGAGHLSVIKTLVHA-GADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLN 126
L AA +G + ++ L+H + + T L+ + ++ L + +
Sbjct: 6 LSGAAARG--DVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNV 63
Query: 127 ITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYL 186
+ A L +K LV GADVN T + P+ A +G +V +L
Sbjct: 64 QDTSGTSPVHDAARTG---FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120
Query: 187 IEHGADLNITNHYNNSCLMIAAYKG 211
+DL+ + + L +A +G
Sbjct: 121 AAE-SDLHRRDARGLTPLELALQRG 144
Score = 32.1 bits (71), Expect = 0.027
Identities = 7/38 (18%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Query: 169 TPLRAACYDGRLDIVKYLIE-HGADLNITNHYNNSCLM 205
L A G + V+ L+ + N + + L
Sbjct: 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQ 41
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 58.1 bits (139), Expect = 2e-11
Identities = 27/139 (19%), Positives = 46/139 (33%), Gaps = 9/139 (6%)
Query: 28 TKTQSTPLRAACYDGRLDIVKYLIEHGADLNIT------NHYNNSCLMIAAYKGA-GHLS 80
T + L A + + G DL + + + L +A L
Sbjct: 3 TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLH 62
Query: 81 VIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAA 140
++ LV +++ T ST L C + +K L+ A + I N + L IA
Sbjct: 63 IVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAK 122
Query: 141 YKGAGHLSVIKTLVHAGAD 159
H + L A +
Sbjct: 123 RL--KHEHCEELLTQALSG 139
Score = 55.0 bits (131), Expect = 3e-10
Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 12/135 (8%)
Query: 76 AGHLSVIKTLVHAGADVNHSTKTQS------TPLRAACY---DGRLDIVKYLIEHGADLN 126
+ + G D+ + T L A L IV +L+++ +L+
Sbjct: 16 TRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLD 75
Query: 127 ITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYL 186
++ L +K L+ A + + ++ TPL A + L
Sbjct: 76 KQTGKGSTALHYCCLTDNAE--CLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELL 133
Query: 187 IEHGAD-LNITNHYN 200
+ + N H
Sbjct: 134 TQALSGRFNSHVHVE 148
Score = 49.6 bits (117), Expect = 3e-08
Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 7/123 (5%)
Query: 96 TKTQSTPLRAACYDGRLDIVKYLIEHGADLNIT------NHYNNSCLMIAAYKGA-GHLS 148
T + L A + + G DL + + + L +A L
Sbjct: 3 TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLH 62
Query: 149 VIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAA 208
++ LV +++ T ST L C + +K L+ A + I N + L IA
Sbjct: 63 IVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAK 122
Query: 209 YKG 211
Sbjct: 123 RLK 125
Score = 44.6 bits (104), Expect = 2e-06
Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 2/91 (2%)
Query: 1 MIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNIT 60
+ L ++ LV +++ T ST L C + +K L+ A + I
Sbjct: 51 LAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIA 110
Query: 61 NHYNNSCLMIAAYKGAGHLSVIKTLVHAGAD 91
N + L IA H + L A +
Sbjct: 111 NESGETPLDIAKRL--KHEHCEELLTQALSG 139
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 57.4 bits (137), Expect = 2e-11
Identities = 19/129 (14%), Positives = 39/129 (30%), Gaps = 3/129 (2%)
Query: 33 TPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADV 92
L + +G D+V+ +I D ++ N + L A G + +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 93 NHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLN-ITNHYNNSCLMIAAYKGAGHLSVIK 151
S + + K+L+E GA + +T + G+ +
Sbjct: 63 ADSDGWTPLHCA--ASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQ 120
Query: 152 TLVHAGADV 160
L +
Sbjct: 121 FLYGVQEKM 129
Score = 53.1 bits (126), Expect = 9e-10
Identities = 26/131 (19%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 66 SCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADL 125
+ L+ ++ +G +++ +++ D + T L A G +IVK+L++ G ++
Sbjct: 3 ALLLDSSLEG--EFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV 60
Query: 126 NITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQ---STPLRAACYDGRLDI 182
N + + L AA V K LV +GA V T + + +G
Sbjct: 61 NAADSDGWTPLHCAASCNNVQ--VCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQC 118
Query: 183 VKYLIEHGADL 193
++L +
Sbjct: 119 SQFLYGVQEKM 129
Score = 48.1 bits (113), Expect = 5e-08
Identities = 17/114 (14%), Positives = 36/114 (31%), Gaps = 5/114 (4%)
Query: 101 TPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADV 160
L + +G D+V+ +I D ++ N + L A G + +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 161 NHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNN---SCLMIAAYKG 211
S + + K+L+E GA + + + + +G
Sbjct: 63 ADSDGWTPLHCA--ASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEG 114
Score = 37.3 bits (85), Expect = 3e-04
Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Query: 13 VIKTLVHAGADVNHSTKTQ---STPLRAACYDGRLDIVKYLIEHGADL 57
V K LV +GA V T + + +G ++L +
Sbjct: 82 VCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKM 129
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 41.5 bits (95), Expect = 1e-05
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 4/125 (3%)
Query: 32 STPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGAD 91
+ L A GR++ V+ L+E GA+ N N Y + + A L+H
Sbjct: 4 ADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARV--AELLLLHGAEP 61
Query: 92 VNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIK 151
T + P+ A +G LD + L GA L++ + + + +A GH V +
Sbjct: 62 NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEEL--GHRDVAR 119
Query: 152 TLVHA 156
L A
Sbjct: 120 YLRAA 124
Score = 40.7 bits (93), Expect = 2e-05
Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 4/125 (3%)
Query: 64 NNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGA 123
+ L AA +G + ++ L+ AGA+ N P++ L+
Sbjct: 3 SADWLATAAARG--RVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAE 60
Query: 124 DLNITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADVNHSTKTQSTPLRAACYDGRLDIV 183
+ AA +G + L AGA ++ P+ A G D+
Sbjct: 61 PNCADPATLTRPVHDAAREGFLD--TLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVA 118
Query: 184 KYLIE 188
+YL
Sbjct: 119 RYLRA 123
Score = 34.2 bits (76), Expect = 0.004
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 168 STPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLM 205
+ L A GR++ V+ L+E GA+ N N Y +
Sbjct: 4 ADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQ 41
Score = 28.8 bits (62), Expect = 0.26
Identities = 6/28 (21%), Positives = 10/28 (35%)
Query: 25 NHSTKTQSTPLRAACYDGRLDIVKYLIE 52
+ P+ A G D+ +YL
Sbjct: 96 DVRDAWGRLPVDLAEELGHRDVARYLRA 123
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 38.7 bits (88), Expect = 8e-05
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Query: 33 TPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKTLVHAGADV 92
A +G LD VK + G D+N T L AA G +++ L+ GAD+
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLE--ILEFLLLKGADI 61
Query: 93 NHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKG 143
N K TPL +A Y+G + VK L+ GAD + + L +
Sbjct: 62 NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQA 112
Score = 31.4 bits (69), Expect = 0.035
Identities = 11/37 (29%), Positives = 14/37 (37%)
Query: 169 TPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLM 205
A +G LD VK + G D+N T L
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLH 40
>d1nmpa_ c.135.1.1 (A:) Hypothetical protein YbgI {Escherichia coli
[TaxId: 562]}
Length = 247
Score = 27.3 bits (60), Expect = 1.7
Identities = 28/185 (15%), Positives = 50/185 (27%), Gaps = 12/185 (6%)
Query: 37 AACYDGRLDIVKYLIEHGADLNITNH---YNNSCLMIAAYKGAGHLSVIKTLVHAGADVN 93
++ + GAD I +H + +I K +++ +
Sbjct: 39 VTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLA--------ND 90
Query: 94 HSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGAGHLSVIKTL 153
+ PL A G + L+ I L + G S I+
Sbjct: 91 INLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTM-PVPGLELASWIEAR 149
Query: 154 VHAGADVNHSTKTQSTPLRAACYDGRLDIVKYLIEHGADLNITNHYNNSCLMIAAYKGID 213
+ T + A C G + G D IT + + A +G+
Sbjct: 150 LGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLH 209
Query: 214 VGRVG 218
G
Sbjct: 210 FYAAG 214
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.135 0.402
Gapped
Lambda K H
0.267 0.0530 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 847,179
Number of extensions: 37035
Number of successful extensions: 475
Number of sequences better than 10.0: 1
Number of HSP's gapped: 249
Number of HSP's successfully gapped: 118
Length of query: 237
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 154
Effective length of database: 1,268,006
Effective search space: 195272924
Effective search space used: 195272924
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (23.9 bits)