Query psy8425
Match_columns 176
No_of_seqs 276 out of 2781
Neff 10.4
Searched_HMMs 29240
Date Fri Aug 16 18:33:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8425.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8425hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3knb_B Obscurin-like protein 1 99.9 1.5E-22 5.2E-27 128.0 12.2 96 8-105 11-107 (107)
2 3b43_A Titin; I-SET IG fold, e 99.9 5.2E-21 1.8E-25 152.6 14.4 141 3-146 377-561 (570)
3 3knb_A Titin; IG-like, titin, 99.9 1.1E-20 3.6E-25 118.1 12.5 93 9-103 4-99 (100)
4 2yd6_A PTPRD protein; hydrolas 99.9 1.9E-20 6.5E-25 131.5 13.6 139 7-148 3-196 (212)
5 3lcy_A Titin; A-BAND, IG tande 99.8 1.5E-20 5.1E-25 129.9 12.5 136 7-145 4-186 (197)
6 2yd1_A Tyrosine-protein phosph 99.8 7.3E-20 2.5E-24 128.4 15.9 136 8-146 4-190 (212)
7 3qp3_A Titin; I-SET IG-like, s 99.8 6.2E-20 2.1E-24 114.8 13.7 99 4-104 2-101 (103)
8 2cqv_A MLCK, myosin light chai 99.8 7E-20 2.4E-24 116.8 13.5 102 8-111 5-107 (114)
9 2rik_A Titin; I-SET IG fold, p 99.8 1.2E-19 4E-24 132.3 15.8 135 8-145 3-181 (284)
10 2a38_A Titin; Z1Z2, structural 99.8 2E-20 7E-25 129.1 11.1 135 8-145 3-185 (194)
11 2c5d_C AXL oncogene, tyrosine- 99.8 5.6E-20 1.9E-24 127.2 12.8 136 9-145 1-182 (195)
12 3b43_A Titin; I-SET IG fold, e 99.8 7.9E-20 2.7E-24 145.8 15.2 140 3-145 283-466 (570)
13 2rik_A Titin; I-SET IG fold, p 99.8 1.6E-19 5.5E-24 131.6 15.6 140 3-145 91-274 (284)
14 4fa8_A Secreted protein BARF1; 99.8 1.8E-20 6E-25 131.4 9.2 125 18-145 1-192 (203)
15 1rhf_A Tyrosine-protein kinase 99.8 1.4E-19 4.7E-24 123.9 12.9 135 10-145 2-172 (182)
16 3irg_B Obscurin-like protein 1 99.8 3.2E-19 1.1E-23 112.3 12.2 97 7-105 10-107 (107)
17 2iep_A Muscle-specific kinase 99.8 9.9E-20 3.4E-24 125.4 10.3 134 7-145 4-179 (192)
18 2jll_A NCAM2, neural cell adhe 99.8 6.2E-19 2.1E-23 133.8 14.9 133 10-146 1-185 (389)
19 2yuz_A Myosin-binding protein 99.8 2.7E-19 9.3E-24 111.7 10.7 94 8-106 5-98 (100)
20 3puc_A Titin; I-SET IG-like do 99.8 1E-18 3.6E-23 108.3 13.4 95 7-103 3-98 (99)
21 2va4_A NCAM2, N-CAM 2, neural 99.8 1.9E-19 6.3E-24 123.9 10.5 132 9-145 1-183 (192)
22 1g1c_A Immunoglobulin-like dom 99.8 1.7E-18 5.9E-23 107.4 13.5 94 8-103 3-98 (99)
23 2v44_A NCAM2, neural cell adhe 99.8 2.1E-18 7.1E-23 118.7 15.3 131 12-145 4-177 (189)
24 2e7c_A Myosin-binding protein 99.8 1.6E-18 5.4E-23 111.1 13.6 96 7-105 18-117 (118)
25 2kdg_A Myotilin; immonoglobuli 99.8 5.8E-19 2E-23 109.7 10.9 96 7-104 2-99 (100)
26 2j8h_A Titin, connectin; cardi 99.8 3.4E-19 1.2E-23 123.3 10.1 95 9-105 3-100 (197)
27 2kkq_A Myotilin; unknown funct 99.8 1.4E-18 4.9E-23 111.2 12.1 102 3-106 8-112 (116)
28 1fhg_A Telokin; immunoglobulin 99.8 2.2E-18 7.6E-23 115.5 13.6 103 3-107 34-138 (154)
29 2yr3_A Myosin light chain kina 99.8 6.6E-19 2.3E-23 109.4 9.8 95 2-101 3-98 (99)
30 1epf_A NCAM, protein (neural c 99.8 4.9E-18 1.7E-22 116.8 15.2 134 10-144 2-180 (191)
31 2yd9_A Receptor-type tyrosine- 99.8 2E-18 6.9E-23 127.2 13.8 136 7-146 3-191 (304)
32 1waa_A Titin; metal binding pr 99.8 3.4E-18 1.2E-22 105.2 12.6 90 8-103 3-92 (93)
33 2wv3_A Neuroplastin; igcam, me 99.8 2.1E-18 7.1E-23 118.9 12.8 128 9-145 2-180 (190)
34 3ojm_B Fibroblast growth facto 99.8 3.9E-19 1.3E-23 125.6 9.1 135 8-145 13-211 (231)
35 3kvq_A Vascular endothelial gr 99.8 4.3E-19 1.5E-23 111.8 8.1 100 3-106 3-103 (108)
36 1wit_A Twitchin 18TH IGSF modu 99.8 1.7E-18 5.9E-23 106.3 10.5 89 9-101 1-92 (93)
37 2v5t_A NCAM2, N-CAM 2, neural 99.8 7.1E-19 2.4E-23 120.7 9.3 132 10-145 2-178 (189)
38 2edj_A Roundabout homolog 2; K 99.8 3.3E-18 1.1E-22 106.4 11.2 94 7-105 5-100 (100)
39 3kld_A Contactin 4, axcam, BIG 99.8 9.4E-19 3.2E-23 133.2 10.3 125 15-146 210-374 (384)
40 1u2h_A APEG-1, aortic preferen 99.8 1.1E-17 3.6E-22 103.8 12.8 94 8-103 3-98 (99)
41 3rbs_A Myomesin-1; immunoglobu 99.8 1.6E-18 5.5E-23 121.7 10.1 78 10-88 3-83 (207)
42 3irg_A Titin; IG-like, titin, 99.8 9.4E-18 3.2E-22 104.0 12.5 92 9-102 4-98 (100)
43 1nct_A Titin; cell adhesion, g 99.8 1.2E-18 4.1E-23 109.8 8.5 94 7-102 11-105 (106)
44 2nzi_A Titin; IG-domain, FNIII 99.8 2.8E-18 9.6E-23 126.2 11.8 95 9-105 3-100 (305)
45 3grw_A Fibroblast growth facto 99.8 2.7E-18 9.1E-23 122.3 10.3 93 9-103 10-108 (241)
46 1qz1_A Neural cell adhesion mo 99.8 9.2E-19 3.1E-23 127.9 8.1 140 4-145 94-280 (291)
47 2bk8_A Connectin, M1, titin he 99.8 2.6E-17 8.9E-22 101.7 13.4 89 13-103 4-94 (97)
48 2vr9_A Roundabout 1, ROBO; imm 99.8 2.2E-18 7.5E-23 121.0 9.5 137 8-147 7-198 (217)
49 1f97_A Junction adhesion molec 99.8 7.7E-18 2.6E-22 117.4 12.0 131 10-145 1-195 (212)
50 2dm2_A Palladin; beta-sandwich 99.8 4.5E-18 1.6E-22 107.6 9.7 98 7-106 5-105 (110)
51 2lu7_A Obscurin-like protein 1 99.8 7.9E-18 2.7E-22 101.6 10.1 82 17-104 3-84 (84)
52 1wwb_X Protein (brain derived 99.8 9.9E-18 3.4E-22 105.0 10.7 95 7-106 1-101 (103)
53 2dm3_A KIAA0992 protein, palla 99.8 2.8E-18 9.7E-23 108.4 8.2 97 8-106 7-105 (110)
54 3qs9_E FL cytokine receptor; i 99.8 1.7E-18 5.8E-23 137.1 8.4 140 4-150 318-505 (527)
55 3k0w_A Mucosa-associated lymph 99.8 1.3E-17 4.4E-22 117.6 12.0 127 9-146 17-192 (218)
56 2wim_A N-CAM 2, NCAM2, neural 99.8 5.5E-18 1.9E-22 123.8 10.4 141 5-147 93-276 (291)
57 2lvc_A Obscurin-like protein 1 99.7 6.1E-18 2.1E-22 103.6 8.6 79 9-88 3-83 (91)
58 3mtr_A N-CAM-1, NCAM-1, neural 99.7 4.6E-17 1.6E-21 114.3 14.2 95 9-106 18-115 (215)
59 2edh_A Obscurin; structural ge 99.7 6E-17 2.1E-21 102.9 13.1 98 2-106 10-108 (113)
60 2cr6_A KIAA1556 protein, obscu 99.7 6.7E-18 2.3E-22 107.8 8.6 106 2-112 4-111 (115)
61 1hng_A CD2; T lymphocyte adhes 99.7 1.2E-17 4E-22 114.4 10.3 124 19-146 5-167 (176)
62 2v9r_A Roundabout homolog 1; p 99.7 5.8E-18 2E-22 118.1 8.8 134 9-145 8-191 (212)
63 2edf_A Obscurin; beta-sandwich 99.7 2E-17 6.9E-22 103.3 10.1 93 8-106 6-98 (103)
64 1x44_A Myosin-binding protein 99.7 3.2E-17 1.1E-21 102.5 11.0 91 10-106 7-99 (103)
65 2yuv_A Myosin-binding protein 99.7 6.3E-17 2.2E-21 100.6 12.0 92 9-106 6-98 (100)
66 3qs7_E FL cytokine receptor; i 99.7 9.2E-18 3.1E-22 129.6 9.9 135 5-146 224-405 (423)
67 2wim_A N-CAM 2, NCAM2, neural 99.7 1.7E-16 6E-21 115.7 16.2 132 9-143 3-177 (291)
68 3sgj_C Human FCG3A receptor; r 99.7 1.8E-17 6.3E-22 116.0 10.2 121 8-143 5-161 (204)
69 3laf_A Deleted in colorectal c 99.7 1.6E-17 5.5E-22 126.4 10.7 130 12-146 223-392 (403)
70 2cpc_A KIAA0657 protein; immun 99.7 1.3E-16 4.5E-21 101.2 13.3 104 2-111 2-108 (113)
71 3qs7_E FL cytokine receptor; i 99.7 1.9E-17 6.5E-22 127.8 11.1 132 12-147 50-219 (423)
72 1he7_A High affinity nerve gro 99.7 3.7E-17 1.3E-21 105.5 10.6 83 23-107 13-103 (126)
73 1bih_A Hemolin; insect immunit 99.7 1.5E-17 5.2E-22 126.2 10.2 126 17-145 219-386 (395)
74 2e6p_A Obscurin-like protein 1 99.7 3E-17 1E-21 102.7 9.8 92 9-106 6-100 (104)
75 3bp6_B Programmed cell death 1 99.7 1.6E-17 5.6E-22 115.4 9.4 131 13-146 5-184 (202)
76 2ec8_A MAST/stem cell growth f 99.7 3.8E-17 1.3E-21 128.7 12.6 134 9-145 210-401 (524)
77 2eo9_A Roundabout homolog 1; b 99.7 2.1E-17 7E-22 105.9 9.0 95 8-107 6-102 (118)
78 2e6q_A Obscurin-like protein 1 99.7 1E-16 3.5E-21 101.7 11.9 96 5-106 3-108 (112)
79 2d3v_A Leukocyte immunoglobuli 99.7 7.4E-18 2.5E-22 116.9 7.2 93 8-103 3-96 (196)
80 2ec8_A MAST/stem cell growth f 99.7 4.8E-18 1.6E-22 133.9 6.9 141 4-147 304-502 (524)
81 2edk_A Myosin-binding protein 99.7 7E-18 2.4E-22 105.2 6.3 91 9-105 7-101 (101)
82 2eny_A Obscurin; beta-sandwich 99.7 1.5E-17 5.2E-22 104.4 7.9 96 6-106 3-100 (104)
83 1nbq_A JAM, junctional adhesio 99.7 1.6E-17 5.3E-22 115.6 8.7 132 9-145 3-197 (209)
84 3p3y_A Neurofascin; IG domains 99.7 2E-17 7E-22 125.8 9.5 123 18-146 230-394 (404)
85 1fnl_A Low affinity immunoglob 99.7 4.8E-17 1.6E-21 110.9 10.4 122 8-144 5-162 (175)
86 2ckn_A Basic fibroblast growth 99.7 2.3E-17 7.9E-22 101.7 7.9 86 9-101 8-94 (95)
87 2y25_A Myomesin; structural pr 99.7 1.7E-17 5.9E-22 122.4 8.7 92 6-102 3-96 (317)
88 1wwc_A Protein (NT-3 growth fa 99.7 5.1E-17 1.8E-21 104.0 9.7 98 4-106 2-104 (118)
89 1qz1_A Neural cell adhesion mo 99.7 3.1E-16 1.1E-20 114.4 15.0 132 10-143 2-179 (291)
90 3p2t_A Leukocyte immunoglobuli 99.7 3.2E-17 1.1E-21 113.6 8.8 93 8-103 3-96 (196)
91 2yd9_A Receptor-type tyrosine- 99.7 1.6E-17 5.6E-22 122.3 7.8 133 11-146 109-282 (304)
92 3qs9_E FL cytokine receptor; i 99.7 3.3E-17 1.1E-21 129.8 9.9 136 4-146 223-405 (527)
93 3jz7_A MCAR, CAR, coxsackievir 99.7 6.3E-17 2.1E-21 112.8 10.3 129 14-145 4-202 (214)
94 1gxe_A Myosin binding protein 99.7 4.5E-17 1.5E-21 107.4 8.9 84 17-102 25-138 (139)
95 3cx2_A Myosin-binding protein 99.7 2.8E-16 9.4E-21 99.1 12.0 92 9-102 3-107 (108)
96 3caf_A Fibroblast growth facto 99.7 4.3E-17 1.5E-21 101.2 7.9 91 9-101 3-99 (100)
97 2dlt_A Myosin binding protein 99.7 5.9E-17 2E-21 101.8 8.4 92 8-103 6-97 (106)
98 2k1m_A Myosin-binding protein 99.7 2.3E-16 7.8E-21 97.2 10.9 87 10-102 8-94 (95)
99 2cry_A KIN of IRRE-like protei 99.7 7.1E-18 2.4E-22 108.7 4.0 100 2-104 6-114 (122)
100 3bfo_A Mucosa-associated lymph 99.7 2.9E-16 9.9E-21 95.9 10.9 85 9-103 2-87 (91)
101 1cs6_A Axonin-1; neural cell a 99.7 6.7E-17 2.3E-21 122.4 9.8 127 10-145 206-372 (382)
102 3m45_A Cell adhesion molecule 99.7 4.4E-16 1.5E-20 97.7 11.7 97 7-105 3-108 (108)
103 2dav_A SLOW MYBP-C, myosin-bin 99.7 3.9E-17 1.3E-21 105.5 6.9 91 11-103 8-111 (126)
104 1bih_A Hemolin; insect immunit 99.7 5.4E-17 1.9E-21 123.2 8.8 138 5-145 1-190 (395)
105 2e7b_A Obscurin; IG-like domai 99.7 1.4E-16 4.8E-21 99.5 8.7 93 8-106 6-98 (103)
106 2r15_A Myomesin-1; sarcomeric 99.7 1.1E-16 3.7E-21 111.7 9.0 76 23-100 15-92 (212)
107 1uct_A Immunoglobulin alpha FC 99.7 1.5E-16 5.1E-21 112.5 9.7 95 6-103 5-102 (218)
108 1f2q_A High affinity immunoglo 99.7 3.7E-17 1.3E-21 111.5 6.3 122 8-144 2-159 (176)
109 3laf_A Deleted in colorectal c 99.7 8.3E-17 2.8E-21 122.5 8.9 138 4-145 115-301 (403)
110 2dku_A KIAA1556 protein; beta- 99.7 5.5E-16 1.9E-20 96.7 10.8 93 8-106 6-98 (103)
111 1pd6_A Cardiac MYBP-C;, myosin 99.7 5.4E-16 1.9E-20 97.2 10.4 91 6-102 11-103 (104)
112 2fbo_J V1V2;, variable region- 99.7 2.2E-16 7.5E-21 112.8 9.7 91 13-104 5-132 (250)
113 3rjd_A High affinity immunoglo 99.7 6.6E-16 2.3E-20 110.9 11.6 121 10-145 1-157 (262)
114 2wv3_A Neuroplastin; igcam, me 99.7 2.3E-15 8E-20 103.5 13.9 98 3-102 85-189 (190)
115 2ens_A Advanced glycosylation 99.7 8.3E-17 2.9E-21 99.3 5.9 87 8-103 8-95 (96)
116 2o26_X MAST/stem cell growth f 99.7 6.2E-17 2.1E-21 118.3 6.1 137 4-145 85-278 (290)
117 3mj8_L Stimulatory hamster ant 99.7 5.2E-16 1.8E-20 108.6 10.6 90 12-102 3-108 (213)
118 2edn_A Myosin-binding protein 99.7 1.2E-16 4.3E-21 102.0 6.6 93 10-104 12-117 (118)
119 3p3y_A Neurofascin; IG domains 99.7 3.2E-16 1.1E-20 119.2 10.1 138 6-145 12-198 (404)
120 2gi7_A GPVI protein; IG-like d 99.7 1.7E-16 6E-21 109.0 7.8 85 7-103 5-90 (184)
121 3o4o_C Interleukin-1 receptor 99.7 8E-17 2.7E-21 120.2 6.5 133 7-144 15-205 (339)
122 3dmk_A DOWN syndrome cell adhe 99.7 1.8E-16 6E-21 130.9 9.0 139 5-146 613-800 (816)
123 2ocw_A Polymeric-immunoglobuli 99.7 6.5E-16 2.2E-20 123.1 12.0 98 4-104 325-442 (585)
124 1e07_A Carcinoembryonic antige 99.7 1E-15 3.4E-20 123.3 13.1 129 10-145 468-630 (642)
125 2dm7_A KIAA1556 protein; beta- 99.7 7.5E-16 2.6E-20 96.9 9.8 92 8-106 6-97 (108)
126 3d9a_L Light chain of hyhel10 99.7 1.3E-15 4.6E-20 106.4 12.0 90 13-103 4-108 (213)
127 3s97_C Contactin-1; carbonic a 99.7 1.2E-16 4.1E-21 110.4 6.5 132 13-145 11-191 (201)
128 1ry7_B FGFR-3, fibroblast grow 99.7 1.1E-16 3.9E-21 119.1 6.8 125 19-146 132-318 (334)
129 2ifg_A High affinity nerve gro 99.7 1.5E-17 5.2E-22 125.0 1.9 134 7-145 155-335 (347)
130 3dmk_A DOWN syndrome cell adhe 99.7 1.4E-15 4.7E-20 125.6 13.7 135 8-145 427-606 (816)
131 4fqp_A Poliovirus receptor; im 99.7 1.4E-16 4.9E-21 117.7 6.8 141 4-145 111-294 (313)
132 2a38_A Titin; Z1Z2, structural 99.7 1.4E-15 4.8E-20 104.6 11.4 92 9-102 102-194 (194)
133 3ry4_A Low affinity immunoglob 99.7 3.8E-16 1.3E-20 105.5 8.4 120 10-144 4-159 (170)
134 3r4d_A CEA-related cell adhesi 99.7 2.6E-15 8.8E-20 104.5 12.8 136 18-160 7-202 (208)
135 2y23_A Myomesin; structural pr 99.7 5.1E-16 1.8E-20 114.2 9.7 79 10-88 106-188 (312)
136 3rjd_A High affinity immunoglo 99.7 1.2E-15 4.2E-20 109.5 11.3 131 4-146 77-250 (262)
137 1vca_A VCAM-D1,2, human vascul 99.7 2.5E-15 8.6E-20 104.9 12.4 82 19-106 10-93 (202)
138 3ejj_X Macrophage colony-stimu 99.6 5.6E-16 1.9E-20 112.9 9.2 139 4-148 82-274 (289)
139 4f80_A Butyrophilin subfamily 99.6 1.5E-15 5.1E-20 107.3 11.1 128 15-145 9-203 (226)
140 2nzi_A Titin; IG-domain, FNIII 99.6 1.9E-15 6.4E-20 111.0 12.0 101 4-106 93-200 (305)
141 1ugn_A LIR1, leukocyte immunog 99.6 1.5E-15 5E-20 105.4 10.8 93 8-103 3-97 (198)
142 2r15_A Myomesin-1; sarcomeric 99.6 6E-15 2.1E-19 102.8 13.9 92 11-104 118-211 (212)
143 4dep_C Interleukin-1 receptor 99.6 2.7E-16 9.4E-21 117.7 7.3 83 17-103 127-217 (349)
144 3rbs_A Myomesin-1; immunoglobu 99.6 7.4E-16 2.5E-20 108.1 9.1 87 10-101 117-205 (207)
145 1oll_A NK receptor; immune sys 99.6 2.5E-15 8.4E-20 103.6 11.5 92 9-103 3-95 (188)
146 3so5_A LIG-3, leucine-rich rep 99.6 4.3E-15 1.5E-19 93.4 11.7 94 6-101 6-111 (112)
147 4hwu_A Fibroblast growth facto 99.6 1.7E-15 5.8E-20 93.2 9.6 83 15-105 6-89 (95)
148 2v9t_A Roundabout homolog 1; s 99.6 4.9E-16 1.7E-20 99.2 7.2 96 6-103 5-109 (117)
149 3nl4_L Antigen binding fragmen 99.6 1.3E-15 4.5E-20 106.5 10.0 78 11-88 2-93 (213)
150 1hnf_A CD2; T lymphocyte adhes 99.6 1.3E-15 4.5E-20 104.8 9.7 126 17-146 6-172 (182)
151 1ccz_A Protein (CD58); LFA-3, 99.6 1E-15 3.5E-20 104.3 8.9 122 18-145 3-161 (171)
152 3b5h_A Cervical EMMPRIN, HAB18 99.6 7.3E-15 2.5E-19 100.4 13.1 114 20-145 8-173 (184)
153 2cr3_A Basic fibroblast growth 99.6 3.5E-16 1.2E-20 97.1 5.9 84 16-106 9-93 (99)
154 3kld_A Contactin 4, axcam, BIG 99.6 1E-15 3.4E-20 116.5 9.5 94 4-103 289-383 (384)
155 3qr2_A Basigin; CD147, EMMPRIN 99.6 5.4E-15 1.9E-19 96.9 11.7 85 7-91 18-116 (137)
156 4frw_A Poliovirus receptor-rel 99.6 3E-15 1E-19 104.2 10.9 130 15-146 4-202 (218)
157 3oq3_B IFN-alpha/beta binding 99.6 1.2E-15 4.1E-20 113.7 9.4 132 9-145 127-320 (329)
158 1e07_A Carcinoembryonic antige 99.6 6.6E-15 2.3E-19 118.6 14.3 130 10-145 112-274 (642)
159 3s96_B 3B5H10 FAB light chain; 99.6 5.9E-15 2E-19 103.4 12.4 92 11-103 2-116 (218)
160 1wio_A CD4, T-cell surface gly 99.6 9.3E-16 3.2E-20 115.6 8.6 123 18-142 184-351 (363)
161 2yd6_A PTPRD protein; hydrolas 99.6 7.2E-15 2.5E-19 102.8 12.6 95 11-106 109-207 (212)
162 2j8h_A Titin, connectin; cardi 99.6 2.4E-15 8.1E-20 103.8 9.9 97 4-102 93-196 (197)
163 2iep_A Muscle-specific kinase 99.6 1.5E-15 5.2E-20 104.3 8.9 98 4-105 94-192 (192)
164 2ocw_A Polymeric-immunoglobuli 99.6 1.9E-14 6.4E-19 114.6 16.4 90 15-106 5-114 (585)
165 2jll_A NCAM2, neural cell adhe 99.6 1.3E-14 4.6E-19 109.9 14.7 101 4-106 94-197 (389)
166 4fmk_A Poliovirus receptor-rel 99.6 1.4E-15 4.8E-20 106.4 8.6 87 18-105 9-122 (225)
167 2c1o_A IGK-C protein; FAB frag 99.6 6.8E-15 2.3E-19 105.7 12.4 81 8-88 36-135 (254)
168 1gl4_B Basement membrane-speci 99.6 2.7E-15 9.1E-20 92.7 8.8 83 13-102 13-97 (98)
169 4fqp_A Poliovirus receptor; im 99.6 1.6E-15 5.4E-20 112.1 9.1 94 4-105 210-306 (313)
170 4dkd_C Macrophage colony-stimu 99.6 8.3E-16 2.8E-20 112.2 7.5 96 4-103 82-181 (292)
171 1lk3_L 9D7 light chain; antige 99.6 1.2E-14 3.9E-19 101.6 12.7 89 13-103 4-107 (210)
172 3s35_X Vascular endothelial gr 99.6 9.7E-15 3.3E-19 93.7 11.4 96 14-111 12-118 (122)
173 2v5m_A Dscam; neurobiology SPL 99.6 3.9E-15 1.3E-19 112.8 11.0 95 9-106 2-105 (388)
174 3sbw_C Programmed cell death 1 99.6 5.1E-15 1.7E-19 104.0 10.8 128 16-146 7-202 (222)
175 2if7_A SLAM family member 6; N 99.6 5.6E-15 1.9E-19 102.3 10.8 126 16-145 4-182 (193)
176 2wng_A Tyrosine-protein phosph 99.6 5.3E-15 1.8E-19 109.9 11.3 97 10-106 3-118 (327)
177 1jbj_A CD3 epsilon and gamma e 99.6 9.7E-16 3.3E-20 105.6 6.7 63 21-94 10-74 (186)
178 2x1w_L Vascular endothelial gr 99.6 1.1E-15 3.8E-20 107.3 7.1 81 17-101 14-99 (213)
179 3r06_A Anti-mouse CD3epsilon a 99.6 6E-15 2E-19 103.1 10.7 91 11-101 2-106 (213)
180 3b5h_A Cervical EMMPRIN, HAB18 99.6 1.3E-14 4.5E-19 99.1 12.1 99 3-103 76-183 (184)
181 3rbg_A Cytotoxic and regulator 99.6 9.2E-15 3.1E-19 94.3 10.7 92 14-107 5-105 (124)
182 2ny1_B T-cell surface glycopro 99.6 5.6E-16 1.9E-20 106.2 5.0 121 18-145 3-169 (184)
183 2eo1_A OBSCN protein, cDNA FLJ 99.6 4E-15 1.4E-19 92.6 8.5 82 18-105 19-100 (102)
184 3o4o_C Interleukin-1 receptor 99.6 7.8E-16 2.7E-20 114.8 6.0 83 19-103 129-220 (339)
185 1itb_B Type 1 interleukin-1 re 99.6 3.6E-15 1.2E-19 110.0 8.9 70 19-91 112-189 (315)
186 2v44_A NCAM2, neural cell adhe 99.6 4.7E-15 1.6E-19 101.7 8.8 96 4-102 90-188 (189)
187 3sob_L Antibody light chain; b 99.6 2.1E-14 7.3E-19 101.7 12.5 79 10-88 24-116 (237)
188 1nfd_E H57 FAB; complex (immun 99.6 3.4E-15 1.2E-19 104.4 7.9 72 17-88 6-91 (212)
189 3mj6_A Junctional adhesion mol 99.6 2.4E-15 8.1E-20 108.6 7.2 92 11-102 6-121 (268)
190 4dep_C Interleukin-1 receptor 99.6 1.1E-14 3.9E-19 108.9 11.1 126 15-145 12-204 (349)
191 2v5t_A NCAM2, N-CAM 2, neural 99.6 1.3E-14 4.3E-19 99.3 10.2 95 5-103 91-188 (189)
192 4fom_A Poliovirus receptor-rel 99.6 4.7E-16 1.6E-20 114.6 2.9 131 14-145 118-290 (308)
193 1epf_A NCAM, protein (neural c 99.6 7.4E-15 2.5E-19 100.8 8.6 95 4-101 94-189 (191)
194 2oz4_A Intercellular adhesion 99.6 1.5E-15 5.1E-20 109.8 5.3 127 4-145 92-254 (265)
195 3tv3_L PGT128 light chain, IG 99.6 6.8E-15 2.3E-19 102.8 8.5 87 13-102 4-105 (211)
196 3u83_A Poliovirus receptor-rel 99.6 2.9E-15 9.9E-20 111.2 6.8 134 4-145 124-310 (331)
197 2znx_A SCFV; fluorotryptohpan, 99.6 3.9E-14 1.3E-18 101.2 12.5 77 12-88 3-93 (242)
198 3lcy_A Titin; A-BAND, IG tande 99.6 2.6E-14 9E-19 98.2 11.2 97 5-103 95-196 (197)
199 1moe_A Anti-CEA MAB T84.66; an 99.6 3.1E-14 1.1E-18 101.3 11.8 90 12-103 3-112 (240)
200 1cs6_A Axonin-1; neural cell a 99.6 1.1E-14 3.7E-19 110.2 9.9 93 4-102 288-381 (382)
201 3esu_F Antibody 14B7* light ch 99.6 8.1E-14 2.8E-18 99.8 13.6 93 10-103 4-111 (250)
202 2ghw_B Anti-SARS SCFV antibody 99.6 8E-14 2.7E-18 99.6 13.5 86 18-103 10-119 (247)
203 2ifg_A High affinity nerve gro 99.6 1.1E-14 3.9E-19 109.3 9.3 96 4-105 244-347 (347)
204 1q0x_L FAB 9B1, light chain; a 99.6 2.8E-14 9.5E-19 99.7 10.7 75 13-88 4-95 (212)
205 2rcj_C Light chain; immunoglob 99.6 2.6E-14 8.9E-19 112.5 11.7 87 8-94 112-207 (523)
206 2y25_A Myomesin; structural pr 99.6 3.5E-14 1.2E-18 104.6 11.5 93 10-104 221-316 (317)
207 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.6 8.1E-14 2.8E-18 100.4 13.2 78 11-88 4-98 (256)
208 2o26_X MAST/stem cell growth f 99.6 1.6E-14 5.4E-19 105.5 9.3 95 9-105 187-290 (290)
209 2p1y_A Bispecific alpha/beta T 99.6 5.2E-14 1.8E-18 100.0 11.8 75 13-88 3-95 (238)
210 2c5d_C AXL oncogene, tyrosine- 99.6 3.6E-14 1.2E-18 97.8 10.4 90 3-101 99-191 (195)
211 1f3r_B FV antibody fragment; I 99.6 1.4E-13 4.9E-18 99.1 14.0 72 17-88 7-100 (257)
212 3bkj_L WO2 IGG2A FAB fragment 99.5 7E-14 2.4E-18 100.4 12.1 79 10-88 34-131 (252)
213 2rcj_C Light chain; immunoglob 99.5 5.4E-14 1.8E-18 110.7 12.2 87 15-101 5-107 (523)
214 1nqb_A Single-chain antibody f 99.5 2.3E-13 7.9E-18 98.1 14.6 91 15-105 5-122 (256)
215 3pv7_A B7-H6, IG-like domain-c 99.5 1.4E-14 4.8E-19 103.7 8.1 90 15-106 8-121 (248)
216 3auv_A SC-DSFV derived from th 99.5 8.5E-14 2.9E-18 101.4 12.3 79 10-88 12-104 (276)
217 4fa8_A Secreted protein BARF1; 99.5 6.1E-15 2.1E-19 103.1 6.0 89 4-92 100-193 (203)
218 3s97_C Contactin-1; carbonic a 99.5 5.1E-14 1.8E-18 97.1 10.4 88 9-102 112-200 (201)
219 2pet_A Lutheran blood group gl 99.5 5.4E-15 1.9E-19 104.3 5.5 89 15-106 5-117 (231)
220 1c1e_H Catalytic antibody 1E9 99.5 3.3E-14 1.1E-18 99.8 9.4 88 16-103 6-119 (219)
221 3uto_A Twitchin; kinase, muscl 99.5 1.3E-13 4.4E-18 110.2 13.8 91 9-101 481-572 (573)
222 1dr9_A B7-1 (CD80), T lymphocy 99.5 1.1E-14 3.8E-19 100.9 6.7 85 19-104 3-107 (201)
223 2yd1_A Tyrosine-protein phosph 99.5 3.5E-14 1.2E-18 99.3 9.3 91 11-106 111-203 (212)
224 2v5m_A Dscam; neurobiology SPL 99.5 3.2E-14 1.1E-18 107.7 9.8 86 4-101 301-387 (388)
225 1z9m_A GAPA225; nectin-like, I 99.5 7.9E-14 2.7E-18 92.3 10.2 92 12-106 40-141 (145)
226 1z7z_I Intercellular adhesion 99.5 2.2E-15 7.7E-20 116.4 3.0 126 5-145 278-439 (450)
227 3mjg_X Beta-type platelet-deri 99.5 5.9E-14 2E-18 102.3 10.4 97 10-108 181-283 (289)
228 3vh8_G Killer cell immunoglobu 99.5 5.7E-14 2E-18 103.9 10.3 92 6-103 20-115 (316)
229 2va4_A NCAM2, N-CAM 2, neural 99.5 1.9E-13 6.5E-18 93.6 12.2 96 4-102 89-192 (192)
230 1ry7_B FGFR-3, fibroblast grow 99.5 1.8E-15 6.1E-20 112.6 2.0 84 14-103 12-96 (334)
231 1p6f_A NKP46, natural cytotoxi 99.5 1.4E-13 4.7E-18 98.8 11.6 94 7-103 4-98 (242)
232 3r4d_A CEA-related cell adhesi 99.5 4.8E-14 1.6E-18 98.0 8.8 91 11-106 113-203 (208)
233 1rhf_A Tyrosine-protein kinase 99.5 1.4E-13 4.8E-18 93.7 10.7 87 4-101 92-181 (182)
234 1f97_A Junction adhesion molec 99.5 2.8E-14 9.7E-19 99.2 7.3 100 4-103 98-207 (212)
235 1nkr_A P58-CL42 KIR; inhibitor 99.5 8.8E-14 3E-18 96.7 9.8 95 7-103 5-104 (201)
236 1wio_A CD4, T-cell surface gly 99.5 2.2E-14 7.5E-19 108.1 7.2 74 20-105 106-180 (363)
237 4dzb_B Vbeta2 (MAIT T cell rec 99.5 3.1E-13 1E-17 96.5 12.7 77 12-88 3-99 (246)
238 2dru_A Chimera of CD48 antigen 99.5 1.2E-13 4.1E-18 94.7 10.1 123 17-145 6-171 (180)
239 4fom_A Poliovirus receptor-rel 99.5 6.4E-15 2.2E-19 108.5 3.9 96 4-106 205-303 (308)
240 1z7z_I Intercellular adhesion 99.5 1.7E-14 5.8E-19 111.5 6.3 83 3-88 78-164 (450)
241 1svz_A Immunoglobulin;, single 99.5 3.5E-13 1.2E-17 96.4 12.7 90 12-103 3-113 (247)
242 2zg1_A Sialic acid-binding IG- 99.5 2.4E-13 8.2E-18 94.9 11.6 129 14-143 4-201 (214)
243 2v9r_A Roundabout homolog 1; p 99.5 4.6E-14 1.6E-18 98.2 7.9 103 5-111 105-210 (212)
244 3ejj_X Macrophage colony-stimu 99.5 1.5E-13 5.1E-18 100.0 10.6 95 9-105 185-283 (289)
245 3mjg_X Beta-type platelet-deri 99.5 3.4E-13 1.2E-17 98.3 12.4 72 11-90 1-76 (289)
246 3uzq_A Anti-dengue MAB 4E11; d 99.5 5.8E-13 2E-17 95.6 13.4 90 14-103 5-117 (253)
247 2y23_A Myomesin; structural pr 99.5 1.4E-13 4.7E-18 101.1 10.2 88 10-102 222-311 (312)
248 2xzc_L FAB A.17 light chain; i 99.5 2.1E-13 7.3E-18 95.5 10.6 72 17-88 7-94 (216)
249 1f2q_A High affinity immunoglo 99.5 1.6E-13 5.4E-18 93.3 9.5 93 5-106 81-174 (176)
250 3jz7_A MCAR, CAR, coxsackievir 99.5 1.7E-14 5.7E-19 100.4 4.6 96 4-105 115-214 (214)
251 1qgc_4 Protein (immunoglobulin 99.5 1.4E-13 4.7E-18 105.9 9.9 88 13-102 4-111 (438)
252 3k0w_A Mucosa-associated lymph 99.5 2.8E-13 9.5E-18 95.2 10.6 83 11-103 119-202 (218)
253 3vh8_G Killer cell immunoglobu 99.5 4.5E-13 1.5E-17 99.1 12.2 92 10-103 119-215 (316)
254 3v2a_R Vascular endothelial gr 99.5 2.3E-13 7.7E-18 111.4 11.5 128 15-145 229-407 (772)
255 2x1w_L Vascular endothelial gr 99.5 3.6E-13 1.2E-17 94.4 10.9 95 10-106 104-210 (213)
256 2gjj_A A21 single-chain antibo 99.5 4.9E-13 1.7E-17 96.9 11.9 96 9-104 4-119 (264)
257 1sy6_A T-cell surface glycopro 99.5 2.3E-13 7.7E-18 95.1 9.7 57 22-88 15-71 (204)
258 3sgj_C Human FCG3A receptor; r 99.5 1.1E-13 3.8E-18 96.6 8.2 94 4-106 83-177 (204)
259 3d9a_H Heavy chain of hyhel10 99.5 1.2E-13 4E-18 96.5 8.2 72 17-88 7-100 (210)
260 1b6u_A KIR2DL3, P58 killer cel 99.5 9.8E-13 3.3E-17 95.1 13.2 94 8-103 5-103 (257)
261 1jhl_L IGG1-kappa D11.15 FV (l 99.5 1.2E-12 4.1E-17 82.2 11.7 76 13-88 4-93 (108)
262 1qok_A MFE-23 recombinant anti 99.5 9.8E-13 3.4E-17 96.1 12.7 77 13-89 29-129 (282)
263 3juy_B 3B3 single chain varian 99.5 1.4E-12 4.7E-17 93.8 13.3 80 9-88 5-107 (256)
264 1itb_B Type 1 interleukin-1 re 99.5 5.7E-13 2E-17 98.2 11.4 93 9-103 207-314 (315)
265 2j6e_L IGM, FAB light chain; a 99.5 8.8E-14 3E-18 98.5 6.7 77 11-88 21-113 (234)
266 3gkz_A Anti-methamphetamine si 99.5 3E-12 1E-16 92.0 14.7 94 11-104 9-127 (257)
267 1qgc_4 Protein (immunoglobulin 99.5 1.5E-13 5E-18 105.8 8.2 76 13-88 221-319 (438)
268 3ux9_B SCFV antibody; five hel 99.5 2.3E-13 7.8E-18 97.8 8.7 72 17-88 9-96 (256)
269 1fnl_A Low affinity immunoglob 99.5 3.9E-13 1.3E-17 91.3 9.4 90 5-103 84-174 (175)
270 3v2a_R Vascular endothelial gr 99.5 6E-15 2E-19 120.8 0.0 96 8-107 664-760 (772)
271 3eow_R Poliovirus receptor; im 99.4 3.4E-14 1.2E-18 99.9 3.6 126 17-145 6-202 (221)
272 3bqu_C 3H6 FAB light chain; be 99.4 1.7E-14 5.9E-19 102.2 2.1 79 10-88 23-115 (233)
273 3zyj_A Leucine-rich repeat-con 99.4 3.1E-13 1E-17 104.7 9.1 94 10-107 341-437 (440)
274 2vr9_A Roundabout 1, ROBO; imm 99.4 2E-13 6.9E-18 95.5 7.2 87 5-94 102-199 (217)
275 3grw_A Fibroblast growth facto 99.4 7E-13 2.4E-17 94.1 10.1 92 15-108 119-223 (241)
276 3umt_A SCFV heavy chain and li 99.4 4.3E-12 1.5E-16 91.2 14.0 87 17-103 9-121 (256)
277 1nqb_A Single-chain antibody f 99.4 1.4E-12 4.9E-17 94.0 11.3 100 4-103 115-233 (256)
278 1nbq_A JAM, junctional adhesio 99.4 3.1E-14 1.1E-18 98.8 2.4 99 4-102 101-208 (209)
279 3u83_A Poliovirus receptor-rel 99.4 1.2E-13 4.1E-18 102.4 5.7 95 4-106 225-323 (331)
280 1za6_B IGG heavy chain; immuno 99.4 4.3E-13 1.5E-17 100.5 8.7 85 16-102 6-114 (344)
281 2id5_A Lingo-1, leucine rich r 99.4 2E-13 6.8E-18 106.6 7.1 84 16-102 391-476 (477)
282 2xot_A Amphoterin-induced prot 99.4 4.4E-13 1.5E-17 101.4 8.4 81 17-104 253-338 (361)
283 3ojm_B Fibroblast growth facto 99.4 6.3E-13 2.2E-17 93.5 8.7 92 17-110 125-228 (231)
284 3khq_A B-cell antigen receptor 99.4 1.5E-12 5.2E-17 85.0 9.8 94 11-106 18-120 (133)
285 4i0k_A CD276 antigen; immunogl 99.4 3E-14 1E-18 100.1 1.6 85 18-104 3-108 (222)
286 2q20_A VK1 O18/O8 germline lig 99.4 5E-12 1.7E-16 79.5 11.8 78 11-88 4-95 (109)
287 3nfj_J T cell receptor beta ch 99.4 6.1E-12 2.1E-16 89.7 13.7 76 12-87 3-95 (245)
288 3umt_A SCFV heavy chain and li 99.4 1.7E-12 5.8E-17 93.3 10.6 97 10-106 138-248 (256)
289 3pl6_D MBP peptide / T-cell re 99.4 8E-12 2.7E-16 90.3 14.2 93 10-103 26-138 (268)
290 1gsm_A Madcam-1, mucosal addre 99.4 2.6E-12 8.8E-17 90.0 11.1 88 11-106 7-98 (210)
291 2ny1_B T-cell surface glycopro 99.4 7.2E-13 2.4E-17 90.5 8.1 78 17-106 104-182 (184)
292 1q9r_B S25-2 FAB (IGG1K) heavy 99.4 8.2E-13 2.8E-17 92.9 8.5 72 17-88 7-103 (222)
293 2oz4_A Intercellular adhesion 99.4 3.9E-13 1.3E-17 97.1 6.9 77 21-105 14-99 (265)
294 1pz5_B Heavy chain of FAB (SYA 99.4 1.6E-12 5.6E-17 91.3 9.5 86 17-102 7-119 (220)
295 3q5y_A TCR N15 beta; IG, T cel 99.4 6.9E-12 2.4E-16 89.2 12.7 75 12-87 4-96 (240)
296 3omz_A Human vdelta1 gamma del 99.4 1.9E-12 6.6E-17 93.2 9.9 94 10-103 2-118 (259)
297 1ugn_A LIR1, leukocyte immunog 99.4 2.3E-12 7.8E-17 89.2 9.8 91 10-102 101-197 (198)
298 2rgs_A I, IG gamma-2B heavy ch 99.4 5.4E-13 1.9E-17 93.9 6.3 84 8-91 7-102 (218)
299 3ry4_A Low affinity immunoglob 99.4 2E-12 6.9E-17 87.1 8.7 89 4-101 80-169 (170)
300 3q0h_A T cell immunoreceptor w 99.4 3.5E-12 1.2E-16 81.4 9.3 87 16-107 9-112 (117)
301 4i0k_A CD276 antigen; immunogl 99.4 4.3E-12 1.5E-16 88.9 10.7 102 4-108 102-211 (222)
302 2vol_A Murine IGG FC; FC, zinc 99.4 6E-13 2.1E-17 92.9 6.2 80 12-91 4-94 (207)
303 4ei6_B Vbeta16 XV19 type II na 99.4 7.2E-12 2.5E-16 89.3 11.8 77 11-88 3-98 (245)
304 2fbo_J V1V2;, variable region- 99.4 7.7E-13 2.6E-17 94.3 6.7 73 15-88 141-235 (250)
305 3udw_C Poliovirus receptor; PV 99.4 4.3E-12 1.5E-16 80.4 9.4 88 16-105 6-118 (118)
306 2e27_L Anti-ciguatoxin antibod 99.4 1.8E-11 6.2E-16 78.3 12.1 78 11-88 4-95 (119)
307 1op3_H FAB 2G12, heavy chain; 99.4 1.8E-12 6.3E-17 91.5 8.1 72 17-88 7-101 (225)
308 1mju_H Immunoglobulin MS6-12; 99.4 4.4E-12 1.5E-16 89.8 10.0 74 15-88 5-101 (227)
309 1i8k_A Epidermal growth factor 99.4 1.4E-11 4.6E-16 77.3 11.1 76 13-88 4-93 (107)
310 1pko_A Myelin oligodendrocyte 99.4 1.8E-11 6.2E-16 80.1 12.2 92 13-106 9-124 (139)
311 3r08_E T-cell surface glycopro 99.4 1.6E-13 5.6E-18 81.6 2.1 60 17-87 6-66 (82)
312 2ghw_B Anti-SARS SCFV antibody 99.4 6.5E-12 2.2E-16 89.6 10.8 93 10-102 135-241 (247)
313 3nl4_H Antigen binding fragmen 99.4 9.2E-12 3.1E-16 87.1 11.3 73 16-88 5-97 (215)
314 3oq3_B IFN-alpha/beta binding 99.4 8E-12 2.7E-16 93.0 11.5 94 5-101 220-328 (329)
315 4dkd_C Macrophage colony-stimu 99.4 1.9E-12 6.4E-17 94.3 7.9 100 4-105 176-283 (292)
316 1mqk_L Antibody 7E2 FV fragmen 99.4 1.8E-11 6.1E-16 78.4 11.5 91 13-103 4-109 (120)
317 3zyi_A Leucine-rich repeat-con 99.3 6.8E-13 2.3E-17 103.1 5.3 90 10-106 352-446 (452)
318 2fbj_H IGA-kappa J539 FAB (hea 99.3 8.5E-12 2.9E-16 87.8 10.4 87 17-103 7-118 (220)
319 4frw_A Poliovirus receptor-rel 99.3 2.9E-12 1E-16 88.9 7.9 88 14-103 122-211 (218)
320 3sbw_C Programmed cell death 1 99.3 3.2E-12 1.1E-16 89.5 8.0 83 21-106 127-214 (222)
321 3juy_B 3B3 single chain varian 99.3 1E-11 3.6E-16 89.2 10.9 92 10-101 149-255 (256)
322 3p2t_A Leukocyte immunoglobuli 99.3 7.8E-12 2.7E-16 86.3 9.8 77 10-88 100-177 (196)
323 2vsd_A CHIR AB1; immune system 99.3 2.2E-12 7.4E-17 80.8 6.0 90 9-103 4-96 (105)
324 1oll_A NK receptor; immune sys 99.3 3.6E-12 1.2E-16 87.6 7.7 87 10-102 99-187 (188)
325 2ywz_A NEW antigen receptor va 99.3 2.4E-11 8.4E-16 76.6 10.8 76 12-87 2-87 (111)
326 1igt_B IGG2A intact antibody - 99.3 2.3E-12 8E-17 99.5 7.3 82 10-91 238-331 (444)
327 3bae_H WO2 IGG2A FAB fragment 99.3 2.3E-12 7.7E-17 91.2 6.7 72 17-88 7-102 (228)
328 1vca_A VCAM-D1,2, human vascul 99.3 2.3E-12 8E-17 89.7 6.6 103 4-106 85-200 (202)
329 2d3v_A Leukocyte immunoglobuli 99.3 1.9E-12 6.4E-17 89.5 5.9 77 10-88 100-178 (196)
330 1eaj_A Coxsackie virus and ade 99.3 6E-12 2E-16 80.4 7.9 90 12-103 7-125 (126)
331 4hwn_A FC receptor-like A; FCR 99.3 5.4E-12 1.8E-16 79.4 7.4 87 8-103 6-99 (108)
332 1uct_A Immunoglobulin alpha FC 99.3 4.5E-12 1.5E-16 89.4 7.8 89 10-103 106-198 (218)
333 1qfw_M FV, antibody (anti beta 99.3 1.2E-11 3.9E-16 77.7 8.9 76 13-88 4-93 (108)
334 1zox_A CLM-1; IG-superfamily, 99.3 9.2E-11 3.1E-15 74.0 13.1 88 16-105 7-112 (113)
335 1i3g_L Antibody FV fragment; a 99.3 4.1E-11 1.4E-15 75.5 11.0 78 11-88 5-96 (111)
336 2gki_A Nuclease; anti-DNA anti 99.3 1.3E-11 4.3E-16 90.6 9.8 73 16-88 28-123 (291)
337 4f80_A Butyrophilin subfamily 99.3 2.6E-12 9E-17 90.5 5.8 92 10-103 118-213 (226)
338 3qib_D 2B4 beta chain; IG doma 99.3 1.8E-11 6.1E-16 88.6 10.3 77 11-88 28-123 (270)
339 4ffy_L DENV1-E111 single chain 99.3 3.2E-11 1.1E-15 77.8 10.4 95 11-105 2-114 (126)
340 3o3u_N Maltose-binding peripla 99.3 4.3E-12 1.5E-16 101.1 7.6 85 17-106 373-472 (581)
341 3uzq_A Anti-dengue MAB 4E11; d 99.3 1.1E-11 3.9E-16 88.8 8.9 95 10-104 133-245 (253)
342 1f3r_B FV antibody fragment; I 99.3 4.3E-12 1.5E-16 91.4 6.6 92 13-105 142-247 (257)
343 1dee_B IGM RF 2A2; FAB-IBP com 99.3 3.6E-11 1.2E-15 84.7 11.1 72 17-88 7-101 (223)
344 1qok_A MFE-23 recombinant anti 99.3 3.1E-11 1.1E-15 88.1 11.1 92 11-103 163-268 (282)
345 1sy6_A T-cell surface glycopro 99.3 1.4E-12 4.9E-17 91.0 3.7 75 23-102 126-203 (204)
346 2wqr_A IG epsilon chain C regi 99.3 2.7E-12 9.2E-17 95.3 5.3 80 12-91 115-204 (323)
347 2yc1_B Single chain antibody f 99.3 8E-11 2.7E-15 78.0 11.6 95 10-104 16-124 (146)
348 3gkz_A Anti-methamphetamine si 99.3 2.6E-11 8.9E-16 87.1 9.9 94 10-103 141-249 (257)
349 1hzh_H IGG, immunoglobulin hea 99.3 3.6E-11 1.2E-15 93.2 11.2 73 16-88 6-101 (457)
350 1h5b_A Murine T cell receptor 99.3 9E-11 3.1E-15 74.2 11.1 75 13-88 4-93 (113)
351 2gki_A Nuclease; anti-DNA anti 99.3 3.3E-11 1.1E-15 88.4 10.4 98 10-107 159-276 (291)
352 2coq_A NEW antigen receptor va 99.3 4.2E-11 1.4E-15 75.1 9.4 75 13-87 3-87 (108)
353 1j05_L T84.66 antibody, anti-C 99.3 2.6E-11 9E-16 76.4 8.4 76 13-88 4-97 (111)
354 2qsq_A Carcinoembryonic antige 99.3 2.1E-11 7.3E-16 77.0 7.8 80 20-104 10-110 (111)
355 2pet_A Lutheran blood group gl 99.3 1.3E-11 4.5E-16 86.8 7.6 84 5-88 110-211 (231)
356 1igt_B IGG2A intact antibody - 99.3 1.8E-11 6.2E-16 94.5 8.9 87 16-102 6-117 (444)
357 2p1y_A Bispecific alpha/beta T 99.3 1.9E-11 6.4E-16 86.7 8.1 77 12-88 129-221 (238)
358 1xau_A B- and T-lymphocyte att 99.3 1E-10 3.4E-15 72.2 9.9 85 17-103 21-116 (122)
359 1c5d_H Monoclonal antibody aga 99.2 3.3E-11 1.1E-15 84.4 9.1 84 17-102 7-116 (215)
360 2wng_A Tyrosine-protein phosph 99.2 1.4E-11 4.8E-16 91.4 7.4 85 6-92 218-310 (327)
361 1i1c_A IGG2A, IG gamma-2A chai 99.2 9E-12 3.1E-16 89.0 6.0 80 12-91 18-108 (239)
362 1eeq_A Kappa-4 immunoglobulin 99.2 1.5E-10 5.2E-15 73.2 11.1 76 13-88 4-99 (114)
363 2or8_A Hepatitis A virus cellu 99.2 1.7E-11 5.7E-16 77.7 6.5 87 16-102 3-110 (116)
364 3moq_A NEW antigen receptor va 99.2 1.8E-10 6.1E-15 74.4 11.4 77 12-88 2-88 (126)
365 2v5y_A Receptor-type tyrosine- 99.2 2.3E-11 7.7E-16 99.7 8.8 96 8-106 163-263 (731)
366 2wqr_A IG epsilon chain C regi 99.2 1.9E-11 6.5E-16 90.7 7.3 63 26-88 25-94 (323)
367 3fku_X Neutralizing antibody F 99.2 1E-10 3.6E-15 85.3 11.0 75 13-88 4-101 (280)
368 1neu_A Myelin P0 protein; stru 99.2 6.2E-11 2.1E-15 75.8 8.5 91 15-105 4-121 (124)
369 3bp6_B Programmed cell death 1 99.2 2E-11 7E-16 84.4 6.5 79 21-103 114-193 (202)
370 4gos_A V-SET domain-containing 99.2 3.2E-11 1.1E-15 77.8 6.8 85 16-102 11-119 (125)
371 1p6f_A NKP46, natural cytotoxi 99.2 4.5E-11 1.5E-15 85.6 8.2 90 10-105 102-193 (242)
372 1sq2_N Novel antigen receptor; 99.2 1.7E-10 5.7E-15 73.0 9.9 75 13-87 3-87 (113)
373 3mj8_L Stimulatory hamster ant 99.2 1E-11 3.5E-16 86.5 4.6 81 9-89 113-200 (213)
374 1xt5_A Variable region-contain 99.2 9.9E-11 3.4E-15 76.0 9.0 90 13-103 7-133 (135)
375 1hzh_H IGG, immunoglobulin hea 99.2 1.8E-11 6.2E-16 94.9 6.4 80 10-90 132-218 (457)
376 2gi7_A GPVI protein; IG-like d 99.2 1.5E-11 5.2E-16 84.2 5.2 73 10-88 94-166 (184)
377 2q87_A CMRF35-H antigen; all-b 99.2 1.9E-10 6.4E-15 72.3 9.8 87 17-105 3-108 (110)
378 1iga_A IGA1; immunoglobulin; N 99.2 2.4E-10 8.2E-15 89.1 12.5 75 14-88 5-102 (475)
379 1x9q_A SCFV, 4M5.3 anti-fluore 99.2 7.9E-11 2.7E-15 85.2 9.1 93 9-103 14-127 (268)
380 3liz_H 4C3 monoclonal antibody 99.2 1.2E-10 4E-15 83.7 9.7 73 16-88 6-101 (253)
381 1pew_A JTO2, A lambda-6 type i 99.2 1.2E-10 4E-15 73.2 8.5 72 17-88 7-94 (109)
382 1dlf_L Anti-dansyl immunoglobu 99.2 2.7E-10 9.2E-15 72.0 10.2 76 13-88 4-98 (113)
383 3auv_A SC-DSFV derived from th 99.2 1.8E-10 6.1E-15 83.7 10.6 94 13-106 137-257 (276)
384 1igy_B IGG1 intact antibody MA 99.2 4E-12 1.4E-16 98.0 1.9 85 16-102 5-113 (434)
385 1oaq_L Light chain; antibody, 99.2 2.9E-10 9.8E-15 72.6 10.3 91 14-105 5-112 (120)
386 3m8o_H Immunoglobulin A1 heavy 99.2 9.9E-10 3.4E-14 77.0 14.1 73 16-88 6-103 (221)
387 2d9c_A Signal-regulatory prote 99.2 3.7E-10 1.3E-14 73.6 11.0 96 11-106 9-124 (136)
388 3bn9_D E2 FAB heavy chain; ant 99.2 3.9E-11 1.3E-15 86.7 6.7 72 17-88 7-101 (257)
389 1l6x_A Immunoglobulin gamma-1 99.2 1.7E-11 5.9E-16 85.4 4.6 68 23-91 16-94 (207)
390 1jbj_A CD3 epsilon and gamma e 99.2 1.7E-11 5.9E-16 84.1 4.4 57 22-88 119-175 (186)
391 2oyp_A Hepatitis A virus cellu 99.2 4.9E-11 1.7E-15 74.5 6.1 84 18-103 2-108 (109)
392 2zg1_A Sialic acid-binding IG- 99.2 3.5E-11 1.2E-15 83.8 5.9 67 22-94 135-206 (214)
393 3d9a_L Light chain of hyhel10 99.2 2.6E-11 9E-16 84.4 5.2 79 10-88 112-199 (213)
394 2ptt_A CD48 antigen; CD244, CD 99.2 1E-10 3.5E-15 73.5 7.4 83 17-103 10-108 (110)
395 1dn0_B IGM-kappa cold agglutin 99.2 3.4E-10 1.2E-14 80.3 11.0 71 17-87 7-99 (232)
396 3rrq_A Protein PD-1, programme 99.2 1.4E-10 4.9E-15 75.1 8.2 93 14-106 5-118 (129)
397 2w59_A IGY FCU3-4; immunoglobu 99.2 2.5E-11 8.4E-16 86.2 4.9 81 9-90 11-102 (231)
398 3kg5_A B-cell antigen receptor 99.2 4.3E-10 1.5E-14 73.3 10.4 94 12-106 20-122 (134)
399 1za6_B IGG heavy chain; immuno 99.2 3.3E-11 1.1E-15 90.2 5.6 75 10-90 120-206 (344)
400 3u6r_L Antibody 1:7 (light cha 99.2 9.2E-10 3.1E-14 72.6 11.8 90 13-103 3-106 (143)
401 1lk3_L 9D7 light chain; antige 99.1 5.2E-11 1.8E-15 82.9 5.9 79 10-88 111-198 (210)
402 1igy_B IGG1 intact antibody MA 99.1 1.7E-10 5.7E-15 88.9 9.1 81 10-91 119-205 (434)
403 3esu_F Antibody 14B7* light ch 99.1 2.6E-10 8.8E-15 81.4 9.5 76 12-87 133-231 (250)
404 1nkr_A P58-CL42 KIR; inhibitor 99.1 2E-10 6.8E-15 79.6 8.4 75 10-88 108-183 (201)
405 4gjt_B Poliovirus receptor-rel 99.1 1.2E-10 4.2E-15 74.7 6.8 87 15-103 5-117 (123)
406 1hxm_B Gamma-delta T-cell rece 99.1 1.5E-09 5E-14 77.4 12.8 78 11-88 2-102 (242)
407 3r0n_A Poliovirus receptor-rel 99.1 2.7E-10 9.3E-15 73.4 8.1 85 15-101 7-128 (128)
408 3pv7_A B7-H6, IG-like domain-c 99.1 1.9E-10 6.7E-15 81.9 8.1 98 4-102 113-225 (248)
409 3mj6_A Junctional adhesion mol 99.1 1.3E-10 4.5E-15 83.6 7.2 86 16-103 124-237 (268)
410 1iga_A IGA1; immunoglobulin; N 99.1 8E-10 2.7E-14 86.1 12.0 66 23-88 139-212 (475)
411 3eow_R Poliovirus receptor; im 99.1 9.5E-11 3.2E-15 82.2 6.1 99 3-106 109-213 (221)
412 1ypz_E T cell receptor delta, 99.1 4.5E-09 1.6E-13 73.3 14.5 75 13-88 4-93 (207)
413 3fku_X Neutralizing antibody F 99.1 3.2E-10 1.1E-14 82.7 8.9 94 10-104 140-251 (280)
414 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.1 5.5E-10 1.9E-14 80.2 10.0 94 9-103 136-248 (256)
415 1u3h_A T-cell receptor alpha-c 98.7 7.8E-12 2.7E-16 78.8 0.0 75 14-88 3-93 (110)
416 3ux9_B SCFV antibody; five hel 99.1 4.5E-10 1.6E-14 80.4 9.2 71 18-88 142-235 (256)
417 3tv3_L PGT128 light chain, IG 99.1 3.7E-11 1.3E-15 83.6 3.2 80 9-88 110-197 (211)
418 3t0v_A Immunoglobulin variable 99.1 1.7E-09 5.8E-14 69.5 10.7 77 11-88 2-94 (123)
419 2jju_A Signal regulatory prote 99.1 5.8E-10 2E-14 71.9 8.5 76 13-88 6-96 (127)
420 1ncn_A T lymphocyte activation 99.1 4.6E-10 1.6E-14 70.4 7.9 73 19-91 3-95 (110)
421 2xzc_L FAB A.17 light chain; i 99.1 1.3E-10 4.5E-15 81.1 5.9 80 9-88 113-201 (216)
422 1tvd_A T cell receptor, ES204 99.1 5.8E-10 2E-14 70.7 8.4 76 13-88 3-98 (116)
423 2yz1_A Tyrosine-protein phosph 99.1 3.6E-10 1.2E-14 72.0 7.4 78 11-88 8-100 (120)
424 3nl4_L Antigen binding fragmen 99.1 2.9E-10 1E-14 79.1 7.4 81 8-89 112-200 (213)
425 1nfd_E H57 FAB; complex (immun 99.1 1.5E-11 5.1E-16 85.7 0.7 80 9-88 112-198 (212)
426 2i24_N NEW antigen receptor PB 99.1 1.5E-09 5.1E-14 69.5 10.0 75 13-87 3-87 (121)
427 1hng_A CD2; T lymphocyte adhes 99.1 1.2E-10 4E-15 79.3 4.9 60 24-94 109-169 (176)
428 1q9r_B S25-2 FAB (IGG1K) heavy 99.1 1.6E-10 5.4E-15 81.1 5.7 81 10-92 127-214 (222)
429 2znx_A SCFV; fluorotryptohpan, 99.1 9E-10 3.1E-14 78.4 9.7 74 15-88 127-222 (242)
430 1i1r_A GP130, interleukin-6 re 99.1 2.6E-09 9E-14 78.5 12.3 89 15-106 9-105 (303)
431 2wbj_D OB TCR; transmembrane, 99.1 1.3E-09 4.6E-14 79.2 10.6 79 10-88 24-122 (279)
432 2or7_A T-cell immunoglobulin a 99.1 4.9E-10 1.7E-14 70.9 7.3 87 16-103 3-110 (115)
433 3bj9_1 Immunoglobulin IOTA cha 99.1 2.9E-09 9.9E-14 67.4 10.9 87 17-103 5-114 (116)
434 1mju_H Immunoglobulin MS6-12; 99.1 1.7E-10 5.9E-15 81.5 5.7 94 10-106 121-220 (227)
435 1moe_A Anti-CEA MAB T84.66; an 99.1 8.5E-10 2.9E-14 78.1 9.1 75 13-87 122-219 (240)
436 3s96_B 3B5H10 FAB light chain; 99.1 1.8E-10 6.3E-15 80.3 5.6 80 9-88 120-206 (218)
437 1nko_A Sialic acid binding IG- 99.1 7.3E-10 2.5E-14 71.8 8.0 93 12-106 8-130 (132)
438 1dr9_A B7-1 (CD80), T lymphocy 99.1 1.3E-09 4.4E-14 75.2 9.7 70 23-93 119-193 (201)
439 1fo0_B Protein (BM3.3 T cell r 99.1 1.8E-09 6.1E-14 68.1 9.5 75 13-88 4-96 (112)
440 2qhl_A Novel immune-type recep 99.1 4.5E-10 1.5E-14 70.7 6.7 73 16-88 5-98 (111)
441 1q0x_L FAB 9B1, light chain; a 99.1 2.8E-10 9.5E-15 79.2 6.2 81 9-89 114-202 (212)
442 1svz_A Immunoglobulin;, single 99.1 1E-09 3.4E-14 78.2 9.2 74 15-88 132-228 (247)
443 1p4b_L Antibody variable light 99.0 3.1E-09 1.1E-13 69.3 10.7 92 12-104 8-116 (135)
444 3kgr_A LAIR-1, hlair1, leukocy 99.0 1.2E-09 4.1E-14 68.3 8.3 94 8-103 7-103 (106)
445 3shs_A HOC head outer capsid p 99.0 2E-09 6.9E-14 77.4 10.3 73 12-94 4-81 (304)
446 3bp6_A Programmed cell death p 99.0 6.4E-09 2.2E-13 66.0 11.8 90 14-103 3-113 (117)
447 2atp_B T-cell surface glycopro 99.0 1.8E-09 6.3E-14 68.2 9.2 74 15-88 3-101 (115)
448 1fo0_A Protein (BM3.3 T cell r 99.0 1.9E-09 6.5E-14 68.3 9.2 75 13-87 3-95 (116)
449 2c1o_A IGK-C protein; FAB frag 99.0 2.1E-10 7.3E-15 82.0 5.2 79 10-88 154-241 (254)
450 2d9q_B Granulocyte colony-stim 99.0 1.9E-10 6.6E-15 85.0 4.6 87 17-106 7-100 (313)
451 2otu_A FV light chain variable 99.0 5.7E-09 2E-13 66.0 10.9 75 13-88 5-98 (115)
452 1x9q_A SCFV, 4M5.3 anti-fluore 99.0 2.7E-09 9.2E-14 77.1 10.6 73 16-88 157-254 (268)
453 3bik_B Programmed cell death p 99.0 1.2E-08 4E-13 66.4 12.5 93 13-105 12-125 (134)
454 1c1e_H Catalytic antibody 1E9 99.0 1.5E-10 5E-15 81.1 3.6 81 11-92 125-211 (219)
455 1b6u_A KIR2DL3, P58 killer cel 99.0 2.9E-10 1E-14 82.1 5.1 95 10-108 107-206 (257)
456 2xqy_G A13-D6.3 monoclonal ant 99.0 4E-09 1.4E-13 76.2 11.0 74 15-88 11-107 (261)
457 3r06_A Anti-mouse CD3epsilon a 99.0 5.2E-10 1.8E-14 77.8 6.0 81 8-88 110-199 (213)
458 3sob_L Antibody light chain; b 99.0 1.2E-09 4.2E-14 77.0 8.1 81 8-88 133-222 (237)
459 3n9g_H FAB fragment of MAB CR4 99.0 5.6E-09 1.9E-13 73.8 11.4 72 17-88 7-101 (230)
460 2edo_A CD48 antigen; beta-sand 99.0 2.5E-10 8.6E-15 73.1 3.8 88 19-106 13-113 (121)
461 2nms_A CMRF35-like-molecule 1; 99.0 1.2E-08 4E-13 65.6 11.4 90 16-106 8-114 (124)
462 4fmk_A Poliovirus receptor-rel 99.0 8E-10 2.7E-14 76.8 6.4 97 7-103 118-219 (225)
463 2gjj_A A21 single-chain antibo 99.0 3E-09 1E-13 76.8 9.4 71 18-88 146-239 (264)
464 1hkf_A NKP44, NK cell activati 99.0 1.4E-08 4.9E-13 64.9 11.5 91 12-102 12-120 (122)
465 1n26_A IL-6 receptor alpha cha 99.0 7.8E-10 2.7E-14 82.3 6.4 88 12-106 8-96 (325)
466 1nez_G T-cell surface glycopro 99.0 6.3E-09 2.1E-13 67.2 9.8 80 9-88 3-107 (128)
467 2j6e_L IGM, FAB light chain; a 99.0 1.8E-10 6.3E-15 81.2 2.8 84 9-92 134-226 (234)
468 3noi_A Natural cytotoxicity tr 99.0 1.5E-09 5.1E-14 69.2 6.8 75 14-88 11-103 (120)
469 3omz_A Human vdelta1 gamma del 99.0 2.4E-09 8.2E-14 76.9 8.5 79 10-88 136-231 (259)
470 1hxm_A Gamma-delta T-cell rece 99.0 4.2E-08 1.4E-12 69.5 14.8 76 13-88 4-97 (229)
471 4ety_A LAIR-1, mlair1, leukocy 99.0 2.8E-08 9.6E-13 63.2 12.3 90 9-104 8-102 (118)
472 2hp4_A T-cell surface glycopro 99.0 4.6E-09 1.6E-13 66.4 8.6 76 13-88 3-99 (114)
473 1bec_A 14.3.D T cell antigen r 99.0 1.2E-08 4E-13 72.4 11.7 75 13-88 2-94 (238)
474 2z35_A T-cell receptor alpha-c 99.0 1.9E-09 6.5E-14 67.9 6.7 74 13-86 3-92 (112)
475 3d9a_H Heavy chain of hyhel10 99.0 6.5E-10 2.2E-14 77.3 5.0 82 10-92 118-205 (210)
476 1pz5_B Heavy chain of FAB (SYA 99.0 7.3E-10 2.5E-14 77.6 5.2 82 10-92 125-212 (220)
477 2if7_A SLAM family member 6; N 99.0 2.9E-09 1E-13 73.3 8.1 58 23-91 121-182 (193)
478 2aty_A Complement receptor chi 98.9 3.3E-09 1.1E-13 80.6 8.9 75 14-88 171-255 (376)
479 3r8b_B G5-8, enterotoxin type 98.9 3.7E-08 1.3E-12 63.2 12.6 78 11-88 6-101 (125)
480 3bkj_L WO2 IGG2A FAB fragment 98.9 6.5E-10 2.2E-14 79.6 4.6 79 10-88 150-237 (252)
481 3qhz_H Human monoclonal antibo 98.9 8.7E-09 3E-13 72.8 10.3 72 17-88 7-105 (232)
482 3bqu_C 3H6 FAB light chain; be 98.9 7.1E-10 2.4E-14 78.2 4.6 79 10-88 134-221 (233)
483 4esk_A LAIR-1, mlair1, leukocy 98.9 2.3E-08 7.7E-13 62.0 10.8 87 9-102 8-100 (102)
484 1dee_B IGM RF 2A2; FAB-IBP com 98.9 7.7E-09 2.6E-13 72.7 9.4 71 22-92 138-218 (223)
485 2fbj_H IGA-kappa J539 FAB (hea 98.9 7.2E-09 2.5E-13 72.7 9.2 82 10-92 123-211 (220)
486 1ypz_F T-cell receptor gamma c 98.9 1.7E-08 5.8E-13 71.4 11.1 76 13-88 4-101 (230)
487 2h32_A Immunoglobulin IOTA cha 98.9 4.9E-09 1.7E-13 67.5 7.5 85 17-103 7-115 (126)
488 2vol_A Murine IGG FC; FC, zinc 98.9 2.2E-09 7.6E-14 74.7 6.3 83 6-88 105-194 (207)
489 1u9k_A Triggering receptor exp 98.9 8.2E-09 2.8E-13 65.2 8.4 74 15-88 4-98 (114)
490 3to4_D NKT vbeta2 (mouse varia 98.9 4.7E-09 1.6E-13 75.2 7.9 74 14-88 5-96 (253)
491 3bia_X T-cell immunoglobulin a 98.9 1.3E-08 4.5E-13 64.3 9.1 89 17-105 3-113 (116)
492 2aw2_A B and T lymphocyte atte 98.9 3.4E-08 1.1E-12 60.3 10.2 85 18-103 19-110 (120)
493 2rgs_A I, IG gamma-2B heavy ch 98.9 1.5E-09 5E-14 76.2 5.0 83 6-88 113-202 (218)
494 3bdb_A Novel immune-type recep 98.9 5.6E-09 1.9E-13 68.2 7.4 90 16-105 5-115 (137)
495 1olz_A Semaphorin 4D; developm 98.9 1E-09 3.4E-14 88.8 4.6 92 18-112 541-636 (663)
496 1a2y_B IGG1-kappa D1.3 FV (hea 98.9 1.9E-08 6.3E-13 63.7 9.5 72 17-88 7-100 (116)
497 1mq8_A ICAM-1, intercellular a 98.9 5.6E-10 1.9E-14 82.0 2.5 99 4-105 79-188 (291)
498 3dmm_D T-cell surface glycopro 98.9 1.3E-08 4.3E-13 67.6 8.9 93 11-103 2-119 (150)
499 1dn0_B IGM-kappa cold agglutin 98.9 1.6E-08 5.5E-13 71.6 10.0 73 22-94 137-220 (232)
500 3bae_H WO2 IGG2A FAB fragment 98.9 5.9E-09 2E-13 73.5 7.2 82 10-92 130-217 (228)
No 1
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.89 E-value=1.5e-22 Score=128.03 Aligned_cols=96 Identities=26% Similarity=0.384 Sum_probs=85.9
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
..||.|+..+.++.+.+|+.+.|.|.+.|.|.|.+.|+|||..+..+.++.+.......+|.|.++..+|+|.|+|.|.|
T Consensus 11 ~~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 90 (107)
T 3knb_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEE
Confidence 35899999999999999999999999999999999999999999988888776666778999999999999999999999
Q ss_pred C-CCceEEEEEEEEEecCC
Q psy8425 88 V-HKDVVSAFAEVSINLRP 105 (176)
Q Consensus 88 ~-g~~~~s~~~~l~V~~~p 105 (176)
. |....+ +.|.|..+|
T Consensus 91 ~~G~~~~~--~~l~V~~pP 107 (107)
T 3knb_B 91 AAGEAYAA--AAVTVLEPP 107 (107)
T ss_dssp TTEEEEEE--EEEEEEC--
T ss_pred CCCEEEEE--EEEEEEcCC
Confidence 9 877777 899998876
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.86 E-value=5.2e-21 Score=152.56 Aligned_cols=141 Identities=21% Similarity=0.363 Sum_probs=115.6
Q ss_pred CCccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEE
Q psy8425 3 KGLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 82 (176)
..|.|..+|.+...+..+.+.+|+++.|.|.+.|.|.|.+.|+|+|..+..+.++.+.......+|.|.++..+|+|.|+
T Consensus 377 ~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 456 (570)
T 3b43_A 377 TSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQ 456 (570)
T ss_dssp EEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred EEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEE
Confidence 35678889999888888899999999999999999999999999999998877777765556678999999999999999
Q ss_pred EEEEcC-CCceEEEEEEEEEecCCC---------------------CCCCCCCCCeEEecC------------------C
Q psy8425 83 CRGTGV-HKDVVSAFAEVSINLRPD---------------------NMGGPCPLDSYCLNG------------------G 122 (176)
Q Consensus 83 C~a~n~-g~~~~s~~~~l~V~~~p~---------------------~~g~p~p~~~~~~~~------------------~ 122 (176)
|.|.|. |..... +.|.|..+|. +.|.|.|.-.|..++ +
T Consensus 457 C~A~N~~G~~~~~--~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~ 534 (570)
T 3b43_A 457 CKASNDVGSDTCV--GSITLKAPPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIA 534 (570)
T ss_dssp EEEECSSCEEEEE--EEEEECCCCEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEECCCSSEE
T ss_pred EEEEECCCeEEEE--EEEEeccCCcccccCCCceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEEECCCEE
Confidence 999999 877776 8888888775 345565543343322 2
Q ss_pred EEEE----eccCCeeEEEecCCcccCcC
Q psy8425 123 SCTY----YDTVGELVCQCAEGYKGQRC 146 (176)
Q Consensus 123 ~~~i----~~d~g~y~C~~~~n~~g~~c 146 (176)
.|.| .+|+|.|.|. |.|..|..-
T Consensus 535 ~L~i~~~~~~d~G~Y~C~-a~N~~G~~~ 561 (570)
T 3b43_A 535 TLQFSRAEPANAGKYTCQ-IKNEAGTQE 561 (570)
T ss_dssp EEEESSCCTTCCEEEEEE-EECSSCEEE
T ss_pred EEEECcCCHHHCEEEEEE-EEECCcEEE
Confidence 4555 5899999999 999999754
No 3
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.86 E-value=1.1e-20 Score=118.09 Aligned_cols=93 Identities=24% Similarity=0.404 Sum_probs=80.7
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCc--ceEEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNK--RLKIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
.||.|...+.++.+.+|+.+.|.|.+.|.|.|.+.|+|||..+.... ++.+.......+|.|.+++.+|+|.|+|.|.
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 83 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEE
Confidence 47889888999999999999999999999999999999999997643 4555555667789999999999999999999
Q ss_pred cC-CCceEEEEEEEEEec
Q psy8425 87 GV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~~ 103 (176)
|. |....+ +.|.|+.
T Consensus 84 N~~G~~~~~--~~l~V~~ 99 (100)
T 3knb_A 84 NEFGSDSAT--VNIHIRS 99 (100)
T ss_dssp ETTEEEEEE--EEEEEEC
T ss_pred ECCCEEEEE--EEEEEEE
Confidence 99 777666 8888863
No 4
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.85 E-value=1.9e-20 Score=131.47 Aligned_cols=139 Identities=21% Similarity=0.348 Sum_probs=104.4
Q ss_pred ccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEe-cceEEEEEcccC-CCCCEEEEEE
Q psy8425 7 ATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFK-KKRSTLIITRIR-SEDAGRYECR 84 (176)
Q Consensus 7 v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~-~~~~~L~i~~v~-~~d~G~Y~C~ 84 (176)
+..+|.|...+.+..+.+|+.+.|.|.+.|.|.+.+.|++++..+........... .....|.|.++. .+|+|.|+|.
T Consensus 3 ~~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 82 (212)
T 2yd6_A 3 GETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECV 82 (212)
T ss_dssp -CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEE
T ss_pred CCCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEE
Confidence 45689999999999999999999999999999999999999999876433322222 345789999994 9999999999
Q ss_pred EEcC-CCceEEEEEEEEEecC-------CC---------------------CCCCCCCCCeEEecC--------------
Q psy8425 85 GTGV-HKDVVSAFAEVSINLR-------PD---------------------NMGGPCPLDSYCLNG-------------- 121 (176)
Q Consensus 85 a~n~-g~~~~s~~~~l~V~~~-------p~---------------------~~g~p~p~~~~~~~~-------------- 121 (176)
+.|. +....+ +.|.|..+ |. +.|.|.|...|..++
T Consensus 83 a~n~~g~~~~~--~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~ 160 (212)
T 2yd6_A 83 ASNNVGEISVS--TRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQ 160 (212)
T ss_dssp EEETTEEEEEE--EEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEE
T ss_pred EEcCCCcEEEE--EEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEE
Confidence 9998 665555 77877653 21 345565532333221
Q ss_pred ------CEEEE----eccCCeeEEEecCCcccCcCcc
Q psy8425 122 ------GSCTY----YDTVGELVCQCAEGYKGQRCES 148 (176)
Q Consensus 122 ------~~~~i----~~d~g~y~C~~~~n~~g~~c~~ 148 (176)
+.|.| .+|.|.|.|. |.|..|.....
T Consensus 161 ~~~~~~~~L~i~~~~~~d~G~Y~C~-a~N~~G~~~s~ 196 (212)
T 2yd6_A 161 LRSESIGALQIEQSEESDQGKYECV-ATNSAGTRYSA 196 (212)
T ss_dssp EEETTEEEEEECSCCGGGCEEEEEE-EEETTEEEECC
T ss_pred EecCCeEEEEEcCCCcccCEEEEEE-EECCCCccccc
Confidence 44555 6899999999 99999976543
No 5
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.85 E-value=1.5e-20 Score=129.86 Aligned_cols=136 Identities=21% Similarity=0.397 Sum_probs=105.8
Q ss_pred ccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 7 ATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 7 v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
+..+|.+...+.++.+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+.......+|.|.+++.+|+|.|+|.+.
T Consensus 4 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (197)
T 3lcy_A 4 SGEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIAT 83 (197)
T ss_dssp CCEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEE
T ss_pred cCCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEE
Confidence 45688999999999999999999999999999999999999999988777777665666799999999999999999999
Q ss_pred cC-CCceEEEEEEEEEecCCC------------------------CCCCCCCCCeEEecC-----------------CEE
Q psy8425 87 GV-HKDVVSAFAEVSINLRPD------------------------NMGGPCPLDSYCLNG-----------------GSC 124 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~~~p~------------------------~~g~p~p~~~~~~~~-----------------~~~ 124 (176)
|. +....+ +.|.|..+|. +.|.|.|...+..++ +.+
T Consensus 84 n~~~~~~~~--~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L 161 (197)
T 3lcy_A 84 NEVGEVETS--SKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHL 161 (197)
T ss_dssp CSSCEEEEE--EEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEE
T ss_pred CCCCceeEE--EEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEE
Confidence 98 666666 7777765443 233444322222211 345
Q ss_pred EE-----eccCCeeEEEecCCcccCc
Q psy8425 125 TY-----YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 125 ~i-----~~d~g~y~C~~~~n~~g~~ 145 (176)
.| .+|.|.|.|. +.|..|..
T Consensus 162 ~i~~~~~~~d~G~Y~C~-a~n~~g~~ 186 (197)
T 3lcy_A 162 VMKNVQRKTHAGKYKVQ-LSNVFGTV 186 (197)
T ss_dssp EESSCCHHHHCEEEEEE-EECSSCEE
T ss_pred EEccccchhhCceEEEE-EEcCcCce
Confidence 55 2699999999 99988865
No 6
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.85 E-value=7.3e-20 Score=128.38 Aligned_cols=136 Identities=24% Similarity=0.411 Sum_probs=105.2
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEec-cCcceEEEEe-cceEEEEEcccCC-CCCEEEEEE
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEIT-TNKRLKIQFK-KKRSTLIITRIRS-EDAGRYECR 84 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~-~~~~~~~~~~-~~~~~L~i~~v~~-~d~G~Y~C~ 84 (176)
..||.|...+.++.+.+|+.+.|.|.+.|.|.+.+.|++++..+. ...++.+... .....|.|.++.. +|+|.|+|.
T Consensus 4 ~~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~ 83 (212)
T 2yd1_A 4 AHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECV 83 (212)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEE
T ss_pred CCCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEE
Confidence 368999999999999999999999999999999999999999987 4455554432 3347899999999 999999999
Q ss_pred EEcC-CC-ceEEEEEEEEEecC-------CC---------------------CCCCCCCCC--------------eEEec
Q psy8425 85 GTGV-HK-DVVSAFAEVSINLR-------PD---------------------NMGGPCPLD--------------SYCLN 120 (176)
Q Consensus 85 a~n~-g~-~~~s~~~~l~V~~~-------p~---------------------~~g~p~p~~--------------~~~~~ 120 (176)
+.|. +. .... +.|.|..+ |. +.|.|.|.. .+...
T Consensus 84 ~~n~~g~~~~~~--~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~ 161 (212)
T 2yd1_A 84 AENGVGDAVSAD--ATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLK 161 (212)
T ss_dssp EECSSSCEEEEE--EEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEE
T ss_pred EEeCCCCeEEee--EEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEcc
Confidence 9998 65 4444 78888754 22 334555421 22334
Q ss_pred CCEEEE----eccCCeeEEEecCCcccCcC
Q psy8425 121 GGSCTY----YDTVGELVCQCAEGYKGQRC 146 (176)
Q Consensus 121 ~~~~~i----~~d~g~y~C~~~~n~~g~~c 146 (176)
++.|.| .+|.|.|.|. |.|..|..-
T Consensus 162 ~~~L~i~~v~~~d~G~Y~C~-a~N~~G~~~ 190 (212)
T 2yd1_A 162 DGFLQIENSREEDQGKYECV-AENSMGTEH 190 (212)
T ss_dssp TTEEEECSCCGGGCEEEEEE-EEETTEEEE
T ss_pred CCeEEEccCChhhCEEEEEE-eecCCCcee
Confidence 567777 6899999999 999999764
No 7
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.85 E-value=6.2e-20 Score=114.83 Aligned_cols=99 Identities=18% Similarity=0.275 Sum_probs=88.2
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEE
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 83 (176)
.|.+..+|.|...+.+..+.+|+++.|.|.+.|.|.|.+.|+|++..+....++.+.......+|.|.++..+|+|.|.|
T Consensus 2 ~l~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 81 (103)
T 3qp3_A 2 PFTLDHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRA 81 (103)
T ss_dssp TTTTCEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred CCCCCCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEE
Confidence 46788899999999999999999999999999999999999999999988777777665667789999999999999999
Q ss_pred EEEcC-CCceEEEEEEEEEecC
Q psy8425 84 RGTGV-HKDVVSAFAEVSINLR 104 (176)
Q Consensus 84 ~a~n~-g~~~~s~~~~l~V~~~ 104 (176)
.|.|. |....+ +.|.|...
T Consensus 82 ~a~N~~G~~~~~--~~l~V~~~ 101 (103)
T 3qp3_A 82 VCTNYKGEASDY--ATLDVTGG 101 (103)
T ss_dssp EEEETTEEEEEE--EEEEEECC
T ss_pred EEEeCCCcEEEE--EEEEEECC
Confidence 99999 777666 88888764
No 8
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.84 E-value=7e-20 Score=116.78 Aligned_cols=102 Identities=19% Similarity=0.279 Sum_probs=88.8
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
..+|.|...+..+.+.+|+.+.|.|.+.|.|.|.+.|+|++..+....++.+........|.|.+++.+|+|.|+|.|.|
T Consensus 5 ~~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 84 (114)
T 2cqv_A 5 SSGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVEN 84 (114)
T ss_dssp CCCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEEC
T ss_pred CCCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEE
Confidence 46899998899999999999999999999999999999999999877777776555678999999999999999999999
Q ss_pred C-CCceEEEEEEEEEecCCCCCCCC
Q psy8425 88 V-HKDVVSAFAEVSINLRPDNMGGP 111 (176)
Q Consensus 88 ~-g~~~~s~~~~l~V~~~p~~~g~p 111 (176)
. |..... +.|.|..+|.....|
T Consensus 85 ~~g~~~~~--~~l~V~~~p~~P~~p 107 (114)
T 2cqv_A 85 KLGSRQAQ--VNLTVVDKPDPPAGT 107 (114)
T ss_dssp SSCEEECC--EEEEEECSCSCCCCC
T ss_pred CCCcEEEE--EEEEEECCCCCCCCC
Confidence 9 766666 899999877755444
No 9
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.84 E-value=1.2e-19 Score=132.30 Aligned_cols=135 Identities=24% Similarity=0.385 Sum_probs=107.9
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
..||.|...+.++.+.+|+.+.|.|.+.|.|.+.+.|++++..+....++.+........|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 82 (284)
T 2rik_A 3 MAPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASN 82 (284)
T ss_dssp CCCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred cCCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEE
Confidence 56899999999999999999999999999999999999999999887777776666778999999999999999999999
Q ss_pred C-CCceEEEEEEEEEecCCC----------------------CCCCCCCCCeEEecC-----------------CEEEE-
Q psy8425 88 V-HKDVVSAFAEVSINLRPD----------------------NMGGPCPLDSYCLNG-----------------GSCTY- 126 (176)
Q Consensus 88 ~-g~~~~s~~~~l~V~~~p~----------------------~~g~p~p~~~~~~~~-----------------~~~~i- 126 (176)
. +....+ +.|.|..+|. ..|.|.|...+..++ ..+.|
T Consensus 83 ~~g~~~~~--~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~ 160 (284)
T 2rik_A 83 VAGKDSCS--AQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMY 160 (284)
T ss_dssp TTEEEEEE--EEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEEC
T ss_pred CCceEEEE--EEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEC
Confidence 8 665555 8888887664 234454422222211 23444
Q ss_pred ---eccCCeeEEEecCCcccCc
Q psy8425 127 ---YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 127 ---~~d~g~y~C~~~~n~~g~~ 145 (176)
.+|.|.|.|. +.|..|..
T Consensus 161 ~~~~~d~G~Y~C~-a~n~~g~~ 181 (284)
T 2rik_A 161 NLSVEDSGDYTCE-AHNAAGSA 181 (284)
T ss_dssp SCCGGGCEEEEEE-EECSSCEE
T ss_pred CCCcccCEEEEEE-EEcCCCce
Confidence 6899999999 88887754
No 10
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.84 E-value=2e-20 Score=129.08 Aligned_cols=135 Identities=26% Similarity=0.430 Sum_probs=102.7
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCc--ceEEEEecceEEEEEcccCCCCCEEEEEEE
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNK--RLKIQFKKKRSTLIITRIRSEDAGRYECRG 85 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 85 (176)
..+|.|...+.+..+.+|+.+.|.|.+.+.|.+.+.|+++|..+.... ++.+........|.|.+++.+|+|.|+|.+
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (194)
T 2a38_A 3 TQAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKA 82 (194)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEE
Confidence 457889988899999999999999999999999999999998887643 555655567789999999999999999999
Q ss_pred EcC-CCceEEEEEEEEEec---CCC---------------------CCCCCCCCCeEEec---------------CC--E
Q psy8425 86 TGV-HKDVVSAFAEVSINL---RPD---------------------NMGGPCPLDSYCLN---------------GG--S 123 (176)
Q Consensus 86 ~n~-g~~~~s~~~~l~V~~---~p~---------------------~~g~p~p~~~~~~~---------------~~--~ 123 (176)
.|. +....+ +.|.|.. +|. ..|.|.|...+..+ ++ .
T Consensus 83 ~n~~~~~~~~--~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 160 (194)
T 2a38_A 83 TNGSGQATST--AELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYS 160 (194)
T ss_dssp EETTEEEEEE--EEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEE
T ss_pred EcCCceEeEE--EEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEE
Confidence 998 665555 6677762 332 33445442222222 22 4
Q ss_pred EEE----eccCCeeEEEecCCcccCc
Q psy8425 124 CTY----YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 124 ~~i----~~d~g~y~C~~~~n~~g~~ 145 (176)
+.| .+|.|.|.|. |.|..|..
T Consensus 161 L~i~~~~~~d~G~Y~C~-a~n~~g~~ 185 (194)
T 2a38_A 161 LLIAEAYPEDSGTYSVN-ATNSVGRA 185 (194)
T ss_dssp EEEEEECGGGCEEEEEE-EEETTEEE
T ss_pred EEECCCChhcCeEEEEE-EEeCCCce
Confidence 555 5899999999 98888853
No 11
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.84 E-value=5.6e-20 Score=127.24 Aligned_cols=136 Identities=21% Similarity=0.276 Sum_probs=102.9
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEe-ecCCCeeEEEeCCEEeccCc--ceEEEEecc-------eEEEEEcccCCCCC
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCK-GNPLPAVSWFKDNVEITTNK--RLKIQFKKK-------RSTLIITRIRSEDA 78 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~-g~p~p~i~W~~~g~~l~~~~--~~~~~~~~~-------~~~L~i~~v~~~d~ 78 (176)
.+|.|+..+.++.+.+|+++.|.|.+. +.|.+.+.|+++|..+.... ++++..... ...|.|.+++.+|+
T Consensus 1 e~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 80 (195)
T 2c5d_C 1 EESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDT 80 (195)
T ss_dssp -CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTC
T ss_pred CCCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCC
Confidence 368899999999999999999999999 99999999999999988753 333332222 57899999999999
Q ss_pred EEEEEEEEcCCCceEEEEEEEEEecCCC---------------------CCCCCCC-CCeEEe------------cCCEE
Q psy8425 79 GRYECRGTGVHKDVVSAFAEVSINLRPD---------------------NMGGPCP-LDSYCL------------NGGSC 124 (176)
Q Consensus 79 G~Y~C~a~n~g~~~~s~~~~l~V~~~p~---------------------~~g~p~p-~~~~~~------------~~~~~ 124 (176)
|.|.|.+.|..+...+..+.|.|..+|. +.|.|.| ...|.. .++.+
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~L 160 (195)
T 2c5d_C 81 GQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGHGPQRSL 160 (195)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTSSCCEEE
T ss_pred cEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCcCCCCeE
Confidence 9999999998322322227788877664 4456665 333333 34556
Q ss_pred EE--eccCCeeEEEecCCcccCc
Q psy8425 125 TY--YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 125 ~i--~~d~g~y~C~~~~n~~g~~ 145 (176)
.| ..|+|.|.|. |.|..|..
T Consensus 161 ~i~~~~d~G~Y~C~-a~N~~g~~ 182 (195)
T 2c5d_C 161 HVPGLNKTSSFSCE-AHNAKGVT 182 (195)
T ss_dssp EECCCSSCEEEEEE-EEETTEEE
T ss_pred EEcccccCceEEEE-EEcCCCce
Confidence 66 5689999999 99988865
No 12
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.84 E-value=7.9e-20 Score=145.77 Aligned_cols=140 Identities=24% Similarity=0.382 Sum_probs=112.4
Q ss_pred CCccccCCCeEEeCCc-eeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEE
Q psy8425 3 KGLRATIHPIEVSGLR-NVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 3 ~~l~v~~~p~~~~~~~-~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 81 (176)
..|.|..+|.+..... ...+.+|+.+.|.|.+.|.|.|.+.|+|++..+....++++........|.|.++..+|+|.|
T Consensus 283 ~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 362 (570)
T 3b43_A 283 AQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDY 362 (570)
T ss_dssp EEECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEE
T ss_pred EEEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEE
Confidence 3567888998876543 345789999999999999999999999999999887777776656778999999999999999
Q ss_pred EEEEEcC-CCceEEEEEEEEEecCCC---------------------CCCCCCCCCeEEecC-----------------C
Q psy8425 82 ECRGTGV-HKDVVSAFAEVSINLRPD---------------------NMGGPCPLDSYCLNG-----------------G 122 (176)
Q Consensus 82 ~C~a~n~-g~~~~s~~~~l~V~~~p~---------------------~~g~p~p~~~~~~~~-----------------~ 122 (176)
+|.|.|. |....+ +.|.|..+|. +.|.|.|...|..++ +
T Consensus 363 ~C~a~N~~g~~~~~--~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~ 440 (570)
T 3b43_A 363 TCEAHNAAGSASSS--TSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLT 440 (570)
T ss_dssp EEEEEBTTBCCEEE--EEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEE
T ss_pred EEEEEeCCCEEEEE--EEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEE
Confidence 9999999 887777 8899988774 445666643443322 2
Q ss_pred EEEE----eccCCeeEEEecCCcccCc
Q psy8425 123 SCTY----YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 123 ~~~i----~~d~g~y~C~~~~n~~g~~ 145 (176)
.|.| .+|+|.|.|. |.|..|..
T Consensus 441 ~L~i~~v~~~D~G~Y~C~-A~N~~G~~ 466 (570)
T 3b43_A 441 SIHILNVDSADIGEYQCK-ASNDVGSD 466 (570)
T ss_dssp EEEECSCCGGGCEEEEEE-EECSSCEE
T ss_pred EEEECCCChhhCEEEEEE-EEECCCeE
Confidence 3445 6899999999 99999854
No 13
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.83 E-value=1.6e-19 Score=131.58 Aligned_cols=140 Identities=24% Similarity=0.375 Sum_probs=110.4
Q ss_pred CCccccCCCeEEeCC-ceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEE
Q psy8425 3 KGLRATIHPIEVSGL-RNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 3 ~~l~v~~~p~~~~~~-~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 81 (176)
..|.|..+|.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|++++..+....++.+........|.|.+++.+|+|.|
T Consensus 91 ~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 170 (284)
T 2rik_A 91 AQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDY 170 (284)
T ss_dssp EEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred EEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEE
Confidence 346777888876654 4566889999999999999999999999999999887777766667778999999999999999
Q ss_pred EEEEEcC-CCceEEEEEEEEEecCCC---------------------CCCCCCCCCeEEecC-----------------C
Q psy8425 82 ECRGTGV-HKDVVSAFAEVSINLRPD---------------------NMGGPCPLDSYCLNG-----------------G 122 (176)
Q Consensus 82 ~C~a~n~-g~~~~s~~~~l~V~~~p~---------------------~~g~p~p~~~~~~~~-----------------~ 122 (176)
+|.+.|. +....+ +.|.|..+|. +.|.|.|...|..++ .
T Consensus 171 ~C~a~n~~g~~~~~--~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 248 (284)
T 2rik_A 171 TCEAHNAAGSASSS--TSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLT 248 (284)
T ss_dssp EEEEECSSCEEEEE--EEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEEETTEE
T ss_pred EEEEEcCCCceeEE--EEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEcCCEE
Confidence 9999999 766666 8899988775 445665532333222 2
Q ss_pred EEEE----eccCCeeEEEecCCcccCc
Q psy8425 123 SCTY----YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 123 ~~~i----~~d~g~y~C~~~~n~~g~~ 145 (176)
.|.| .+|.|.|.|. |.|..|..
T Consensus 249 ~L~i~~v~~~d~G~Y~C~-a~N~~G~~ 274 (284)
T 2rik_A 249 SIHILNVDSADIGEYQCK-ASNDVGSY 274 (284)
T ss_dssp EEEECSCCGGGCEEEEEE-EEETTEEE
T ss_pred EEEEcCCCcccCEEEEEE-EEeCCCce
Confidence 3444 6899999999 99998864
No 14
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.83 E-value=1.8e-20 Score=131.44 Aligned_cols=125 Identities=18% Similarity=0.147 Sum_probs=91.9
Q ss_pred ceeEEecCCcEEEEEE---EeecCCCeeEEEeCCEEecc-----------------CcceEEEEecceEEEEEcccCCCC
Q psy8425 18 RNVSVKLRQSLRLVCR---CKGNPLPAVSWFKDNVEITT-----------------NKRLKIQFKKKRSTLIITRIRSED 77 (176)
Q Consensus 18 ~~~~v~~G~~~~l~C~---~~g~p~p~i~W~~~g~~l~~-----------------~~~~~~~~~~~~~~L~i~~v~~~d 77 (176)
+++++..|++++|.|. +.+.|.|.+.|+|+|..+.. ..++.+........|.|.+++.+|
T Consensus 1 q~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 80 (203)
T 4fa8_A 1 QAVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISH 80 (203)
T ss_dssp -CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGG
T ss_pred CCeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHH
Confidence 3578899999999995 56789999999997642211 122333444567789999999999
Q ss_pred CEEEEEEEEcC-CCceEEEEEEEEEecCCC---------------------CCCCCCCCCe------------------E
Q psy8425 78 AGRYECRGTGV-HKDVVSAFAEVSINLRPD---------------------NMGGPCPLDS------------------Y 117 (176)
Q Consensus 78 ~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p~---------------------~~g~p~p~~~------------------~ 117 (176)
+|.|+|.|.|. |..... +.|.|..||. +.|.|.|.-. .
T Consensus 81 ~G~Y~C~a~n~~g~~~~~--~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~ 158 (203)
T 4fa8_A 81 DGNYLCRMKLGETEVTKQ--EHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVM 158 (203)
T ss_dssp CEEEEEEEEETTEEEEEE--EEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCE
T ss_pred CeEEEEEEEcCCCcEEEE--EEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEE
Confidence 99999999998 776666 8888877654 4566666211 2
Q ss_pred EecCCEEEE-------eccCCeeEEEecCCcccCc
Q psy8425 118 CLNGGSCTY-------YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 118 ~~~~~~~~i-------~~d~g~y~C~~~~n~~g~~ 145 (176)
...+|++.+ .+|+|.|+|. |.|..|+.
T Consensus 159 ~~~~g~l~il~i~~v~~~D~G~YtC~-A~N~~G~a 192 (203)
T 4fa8_A 159 KEKDGSLSVAVDLSLPKPWHLPVTCV-GKNDKEEA 192 (203)
T ss_dssp ECTTSCEEEEEEEEECSSCCCCEEEE-EESSSCEE
T ss_pred EeCCCCEEEEEECCCCHHHCEEEEEE-EEcCCCEE
Confidence 234566554 5899999999 99999963
No 15
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.83 E-value=1.4e-19 Score=123.88 Aligned_cols=135 Identities=20% Similarity=0.300 Sum_probs=99.2
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecc--eEEEEEcccCCCCCEEEEEEEEc
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKK--RSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
+|.|...+.++.+.+|+.+.|.|.+.+.|.+.+.|++++..+....+..+..... ...|.|.+++.+|+|.|.|.+.|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEc
Confidence 5678888888999999999999999999999999999999988765554443222 47899999999999999999999
Q ss_pred CCCceEEEEEEEEEecCCC---------------------CCCCCCC-CCeEEec----------CCEEEE--eccCCee
Q psy8425 88 VHKDVVSAFAEVSINLRPD---------------------NMGGPCP-LDSYCLN----------GGSCTY--YDTVGEL 133 (176)
Q Consensus 88 ~g~~~~s~~~~l~V~~~p~---------------------~~g~p~p-~~~~~~~----------~~~~~i--~~d~g~y 133 (176)
..+...+..+.|.|..+|. +.|.|.| ...+..+ ++.+.| .+|+|.|
T Consensus 82 ~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~L~i~~~~d~G~Y 161 (182)
T 1rhf_A 82 GGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLNVTGVTQSTMF 161 (182)
T ss_dssp CTTCEECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEESSEEEEECCCSSCEEE
T ss_pred CCCcEEEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCCCceEEEEeccccCeEE
Confidence 8222222227888887665 4466665 3334333 344555 6899999
Q ss_pred EEEecCCcccCc
Q psy8425 134 VCQCAEGYKGQR 145 (176)
Q Consensus 134 ~C~~~~n~~g~~ 145 (176)
.|. |.|..|..
T Consensus 162 ~C~-a~N~~g~~ 172 (182)
T 1rhf_A 162 SCE-AHNLKGLA 172 (182)
T ss_dssp EEE-EEETTEEE
T ss_pred EEE-EECCCCCc
Confidence 999 99998865
No 16
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.82 E-value=3.2e-19 Score=112.25 Aligned_cols=97 Identities=26% Similarity=0.379 Sum_probs=83.5
Q ss_pred ccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 7 ATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 7 v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
+..+|.|...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+....++.+........|.|.++..+|+|.|+|.|.
T Consensus 10 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 89 (107)
T 3irg_B 10 QGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEE
Confidence 45688999889999999999999999999999999999999999987777766554556689999999999999999999
Q ss_pred cC-CCceEEEEEEEEEecCC
Q psy8425 87 GV-HKDVVSAFAEVSINLRP 105 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~~~p 105 (176)
|. |..... +.|.|..+|
T Consensus 90 n~~g~~~~~--~~l~V~~~P 107 (107)
T 3irg_B 90 NAAGEAYAA--AAVTVLEPP 107 (107)
T ss_dssp ETTEEEEEE--EEEEEEC--
T ss_pred cCCCcEEEE--EEEEEEcCC
Confidence 99 776666 889998765
No 17
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.82 E-value=9.9e-20 Score=125.42 Aligned_cols=134 Identities=22% Similarity=0.465 Sum_probs=100.9
Q ss_pred ccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEecc-CcceEEEEecceEEEEEcccCCCCCEEEEEEE
Q psy8425 7 ATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITT-NKRLKIQFKKKRSTLIITRIRSEDAGRYECRG 85 (176)
Q Consensus 7 v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~-~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 85 (176)
+..+|.|...+..+.+.+|+++.|.|.+.+.|.+.+.|++++..+.. ..++.+. .....|.|.+++.+|+|.|.|.+
T Consensus 4 ~~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~ 81 (192)
T 2iep_A 4 LPKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIR--ENGQLLTILSVEDSDDGIYCCTA 81 (192)
T ss_dssp CCEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEE--GGGTEEEESSCCGGGCEEEEEEE
T ss_pred cCCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEc--CCccEEEEcCCCcccCeEEEEEE
Confidence 45678888888889999999999999999999999999999998865 3344332 45568999999999999999999
Q ss_pred EcC-CCc-eEEEEEEEEEecCCC---------------------CCCCCCCCCeE--------------EecCCEEEE--
Q psy8425 86 TGV-HKD-VVSAFAEVSINLRPD---------------------NMGGPCPLDSY--------------CLNGGSCTY-- 126 (176)
Q Consensus 86 ~n~-g~~-~~s~~~~l~V~~~p~---------------------~~g~p~p~~~~--------------~~~~~~~~i-- 126 (176)
.|. +.. ... +.|.|..+|. ..|.|.|...+ ...++.+.|
T Consensus 82 ~~~~~~~~~~~--~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~ 159 (192)
T 2iep_A 82 NNGVGGAVESC--GALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHN 159 (192)
T ss_dssp ECSSSCCEEEE--EEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSCEEESS
T ss_pred EcCCCceeEeE--EEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCcEEEec
Confidence 998 553 333 6677665443 23344432122 224456776
Q ss_pred --eccCCeeEEEecCCcccCc
Q psy8425 127 --YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 127 --~~d~g~y~C~~~~n~~g~~ 145 (176)
.+|.|.|.|. +.|..|..
T Consensus 160 ~~~~d~G~Y~C~-a~n~~g~~ 179 (192)
T 2iep_A 160 VQKEDAGQYRCV-AKNSLGTA 179 (192)
T ss_dssp CCGGGCEEEEEE-EEETTEEE
T ss_pred CChhhCEEEEEE-EEcCCCcE
Confidence 6899999999 99988865
No 18
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.81 E-value=6.2e-19 Score=133.78 Aligned_cols=133 Identities=22% Similarity=0.415 Sum_probs=100.1
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeC--CEEecc-----CcceEEEEecceEEEEEcccCCCCCEEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKD--NVEITT-----NKRLKIQFKKKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~--g~~l~~-----~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 82 (176)
+|.|.. +.+..+.+|+.+.|.|.+.|.|.|.+.|+|+ |..+.. ..++.+........|.|.+++.+|+|.|.
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 79 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYD 79 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEE
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEE
Confidence 477776 5567788899999999999999999999999 888865 34555544346789999999999999999
Q ss_pred EEEEcC-CCceEEEEEEEEEecCCC---------------------CCCCCCCCCeEEecC-------------------
Q psy8425 83 CRGTGV-HKDVVSAFAEVSINLRPD---------------------NMGGPCPLDSYCLNG------------------- 121 (176)
Q Consensus 83 C~a~n~-g~~~~s~~~~l~V~~~p~---------------------~~g~p~p~~~~~~~~------------------- 121 (176)
|.|.|. |....+ +.|.|..+|. ..|.|.|...+..++
T Consensus 80 C~a~n~~g~~~~~--~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~ 157 (389)
T 2jll_A 80 CEAASRIGGHQKS--MYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRK 157 (389)
T ss_dssp EEEECSSCEEEEE--EEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSC
T ss_pred EEEEeCCCCcceE--EEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCE
Confidence 999999 776666 8888887664 223343311222111
Q ss_pred CEEEE----eccCCeeEEEecCCcccCcC
Q psy8425 122 GSCTY----YDTVGELVCQCAEGYKGQRC 146 (176)
Q Consensus 122 ~~~~i----~~d~g~y~C~~~~n~~g~~c 146 (176)
..|.| ..|.|.|.|. |.|..|..-
T Consensus 158 ~~L~i~~~~~~d~G~Y~C~-a~N~~G~~~ 185 (389)
T 2jll_A 158 MILEIAPTSDNDFGRYNCT-ATNHIGTRF 185 (389)
T ss_dssp EEEEECCCSTTSSEEEEEE-EEETTEEEE
T ss_pred EEEEECCCChhhCEEEEEE-EEcCCCcEE
Confidence 23555 5799999999 999998753
No 19
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=2.7e-19 Score=111.65 Aligned_cols=94 Identities=21% Similarity=0.320 Sum_probs=82.6
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
..+|.|...+.++.+.+|+.+.|.|.+ .|.|.+.|+|||..+..+.++.+........|.|.++..+|+|.|+|.|.|
T Consensus 5 ~~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 82 (100)
T 2yuz_A 5 SSGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDA 82 (100)
T ss_dssp SCCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESS
T ss_pred CCCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcC
Confidence 457788888999999999999999999 788999999999999988888877656667899999999999999999999
Q ss_pred CCCceEEEEEEEEEecCCC
Q psy8425 88 VHKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 88 ~g~~~~s~~~~l~V~~~p~ 106 (176)
. ....+ +.|.|.++|.
T Consensus 83 ~-~~~~~--a~L~V~~~P~ 98 (100)
T 2yuz_A 83 Y-NVTLP--AKVHVISGPS 98 (100)
T ss_dssp S-CCCEE--EEEEEECCSC
T ss_pred C-CeeEE--EEEEEeCCCC
Confidence 8 44455 8999998875
No 20
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.81 E-value=1e-18 Score=108.29 Aligned_cols=95 Identities=24% Similarity=0.420 Sum_probs=83.4
Q ss_pred ccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 7 ATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 7 v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
+..+|.|...+.++.+.+|+.+.|.|.+.+.|.|.+.|++++..+....++.+.......+|.|.++..+|+|.|.|.|.
T Consensus 3 ~~~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 82 (99)
T 3puc_A 3 ISSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVK 82 (99)
T ss_dssp CCEEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEE
Confidence 45688899889999999999999999999999999999999999988778777665666789999999999999999999
Q ss_pred cC-CCceEEEEEEEEEec
Q psy8425 87 GV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~~ 103 (176)
|. |....+ +.|.|..
T Consensus 83 n~~g~~~~~--~~l~V~~ 98 (99)
T 3puc_A 83 NSAGSVSSS--CKLTIKA 98 (99)
T ss_dssp ETTEEEEEE--EEEEEEC
T ss_pred eCCCcEeEE--EEEEEEe
Confidence 99 776666 7777753
No 21
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.81 E-value=1.9e-19 Score=123.94 Aligned_cols=132 Identities=24% Similarity=0.452 Sum_probs=99.4
Q ss_pred CCCeEEeCCc--eeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 9 IHPIEVSGLR--NVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 9 ~~p~~~~~~~--~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
.||.+..... ++.+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+. .....|.|.+++.+|+|.|.|.+.
T Consensus 1 spP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~ 78 (192)
T 2va4_A 1 SMPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILK--GSNTELTVRNIINSDGGPYVCRAT 78 (192)
T ss_dssp CCCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEE--TTTTEEEECSCCGGGCEEEEEEEE
T ss_pred CCCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEe--CCeeEEEEecCChhcCcEEEEEEE
Confidence 3677765543 578889999999999999999999999999999876665443 456689999999999999999999
Q ss_pred cC-CCceEEEEEEEEEecCCC--------------------CCCCCCCCCeEEec------------------------C
Q psy8425 87 GV-HKDVVSAFAEVSINLRPD--------------------NMGGPCPLDSYCLN------------------------G 121 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~~~p~--------------------~~g~p~p~~~~~~~------------------------~ 121 (176)
|. +..... +.|.|..+|. +.|.|.|...+..+ .
T Consensus 79 ~~~~~~~~~--~~l~V~~~p~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (192)
T 2va4_A 79 NKAGEDEKQ--AFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGS 156 (192)
T ss_dssp ETTEEEEEE--EEEEEEEEEEEEEECCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTE
T ss_pred ccccccceE--EEEEEEccCcccccCcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCc
Confidence 98 655555 7777766554 23445442233222 1
Q ss_pred CEEEE----eccCCeeEEEecCCcccCc
Q psy8425 122 GSCTY----YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 122 ~~~~i----~~d~g~y~C~~~~n~~g~~ 145 (176)
+.+.| .+|.|.|.|. |.|..|..
T Consensus 157 ~~L~i~~~~~~d~G~Y~C~-a~n~~g~~ 183 (192)
T 2va4_A 157 SSLHIKDVKLSDSGRYDCE-AASRIGGH 183 (192)
T ss_dssp EEEEEESCCGGGCEEEEEE-EECSSCEE
T ss_pred eEEEEecCCcccCEEEEEE-EEecCCce
Confidence 34555 5899999999 99988863
No 22
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.81 E-value=1.7e-18 Score=107.37 Aligned_cols=94 Identities=17% Similarity=0.324 Sum_probs=80.6
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEE-ecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQF-KKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
..+|.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|+++|..+....++.+.. .....+|.|.++..+|+|.|+|.|.
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 82 (99)
T 1g1c_A 3 MEAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAI 82 (99)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEE
Confidence 357888888999999999999999999999999999999999998766655432 3566789999999999999999999
Q ss_pred cC-CCceEEEEEEEEEec
Q psy8425 87 GV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~~ 103 (176)
|. |....+ +.|.|..
T Consensus 83 N~~g~~~~~--~~l~V~~ 98 (99)
T 1g1c_A 83 NIAGETSSH--AFLLVQA 98 (99)
T ss_dssp ETTEEEEEE--EEEEEEC
T ss_pred ECCCcEEEE--EEEEEec
Confidence 99 776666 8888764
No 23
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.81 E-value=2.1e-18 Score=118.65 Aligned_cols=131 Identities=22% Similarity=0.352 Sum_probs=100.1
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEe-CCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-C
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFK-DNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-H 89 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~-~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g 89 (176)
.+...+.++.+.+|+.+.|.|.+.+.|. .+.|++ ++..+....++.+........|.|.+++.+|+|.|+|.+.|. +
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 82 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKG 82 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTS
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCC
Confidence 4566778889999999999999999887 899999 788887777777766566679999999999999999999998 5
Q ss_pred CceEEEEEEEEEecCCC---------------------CCCCCCCCCeEE----------------ecCCEEEE----ec
Q psy8425 90 KDVVSAFAEVSINLRPD---------------------NMGGPCPLDSYC----------------LNGGSCTY----YD 128 (176)
Q Consensus 90 ~~~~s~~~~l~V~~~p~---------------------~~g~p~p~~~~~----------------~~~~~~~i----~~ 128 (176)
.. .+..+.|.|..+|. ..|.|.|...+. ..++.+.| .+
T Consensus 83 ~~-~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 161 (189)
T 2v44_A 83 QT-QEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKS 161 (189)
T ss_dssp CE-EEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTCCGG
T ss_pred Cc-EEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcCcc
Confidence 54 23237888876654 345565522222 23456666 68
Q ss_pred cCCeeEEEecCCcccCc
Q psy8425 129 TVGELVCQCAEGYKGQR 145 (176)
Q Consensus 129 d~g~y~C~~~~n~~g~~ 145 (176)
|.|.|.|. |.|..|..
T Consensus 162 d~G~Y~C~-a~n~~~~~ 177 (189)
T 2v44_A 162 DEGIYRCE-GRVEARGE 177 (189)
T ss_dssp GCEEEEEE-EEETTTTE
T ss_pred cCeEEEEE-EEccccCc
Confidence 99999999 88776543
No 24
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=1.6e-18 Score=111.15 Aligned_cols=96 Identities=19% Similarity=0.288 Sum_probs=80.6
Q ss_pred ccCCCeEEe---CCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEE
Q psy8425 7 ATIHPIEVS---GLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 7 v~~~p~~~~---~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 83 (176)
+..+|.|.. .+..+.+.+|+.+.|.|.+.|.|.|.+.|+|+|..+. ..++.+........|.|.++..+|+|.|+|
T Consensus 18 v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 96 (118)
T 2e7c_A 18 IAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYEL 96 (118)
T ss_dssp CSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEEE
T ss_pred eccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEEEE
Confidence 445788754 3567889999999999999999999999999999987 355566555566789999999999999999
Q ss_pred EEEcC-CCceEEEEEEEEEecCC
Q psy8425 84 RGTGV-HKDVVSAFAEVSINLRP 105 (176)
Q Consensus 84 ~a~n~-g~~~~s~~~~l~V~~~p 105 (176)
.|.|. |..... +.|.|..+|
T Consensus 97 ~a~N~~G~~~~~--~~l~V~~~P 117 (118)
T 2e7c_A 97 SVQIENMKDTAT--IRIRVVEKA 117 (118)
T ss_dssp EEECSSCEECCE--EEEEEECCC
T ss_pred EEEeCCCeEEEE--EEEEEEcCC
Confidence 99999 766666 889998876
No 25
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.80 E-value=5.8e-19 Score=109.73 Aligned_cols=96 Identities=22% Similarity=0.376 Sum_probs=80.0
Q ss_pred ccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEe-cceEEEEEcccCCCCCEEEEEEE
Q psy8425 7 ATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFK-KKRSTLIITRIRSEDAGRYECRG 85 (176)
Q Consensus 7 v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a 85 (176)
+..+|.|...+..+.+.+|+.+.|.|.+.|.|.|.+.|+++|..+....+..+... ....+|.|.++..+|+|.|+|.|
T Consensus 2 ~~~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 81 (100)
T 2kdg_A 2 AMGPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVA 81 (100)
T ss_dssp CCEEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEE
Confidence 35678888888889999999999999999999999999999999887654333332 34468999999999999999999
Q ss_pred EcC-CCceEEEEEEEEEecC
Q psy8425 86 TGV-HKDVVSAFAEVSINLR 104 (176)
Q Consensus 86 ~n~-g~~~~s~~~~l~V~~~ 104 (176)
.|. |....+ +.|.|...
T Consensus 82 ~n~~g~~~~~--~~l~V~~~ 99 (100)
T 2kdg_A 82 KNRAGEATFT--VQLDVLAK 99 (100)
T ss_dssp EETTEEEEEE--EEEEEECC
T ss_pred EcCCCeEEEE--EEEEEEec
Confidence 999 776666 88888764
No 26
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.80 E-value=3.4e-19 Score=123.28 Aligned_cols=95 Identities=27% Similarity=0.492 Sum_probs=78.0
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccC-cceEEEEe-cceEEEEEcccCCCCCEEEEEEEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTN-KRLKIQFK-KKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~-~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
.+|.|...+.++.+.+|+.+.|.|.+.+.|.+.+.|++++..+... .++.+... .....|.|.+++.+|+|.|+|.+.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 5789999899999999999999999999999999999999988753 34444322 344589999999999999999999
Q ss_pred cC-CCceEEEEEEEEEecCC
Q psy8425 87 GV-HKDVVSAFAEVSINLRP 105 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~~~p 105 (176)
|. +..... +.|.|..+|
T Consensus 83 n~~g~~~~~--~~l~V~~~p 100 (197)
T 2j8h_A 83 NQGGSVSGT--ASLEVEVPA 100 (197)
T ss_dssp ETTEEEEEE--EEEEEEEEE
T ss_pred ECCCceeEE--EEEEEcCCC
Confidence 98 665555 777776543
No 27
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.80 E-value=1.4e-18 Score=111.17 Aligned_cols=102 Identities=20% Similarity=0.363 Sum_probs=85.5
Q ss_pred CCccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEecc-CcceEEEEec-ceEEEEEcccCCCCCEE
Q psy8425 3 KGLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITT-NKRLKIQFKK-KRSTLIITRIRSEDAGR 80 (176)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~-~~~~~~~~~~-~~~~L~i~~v~~~d~G~ 80 (176)
.......+|.|+..+.++.+.+|+++.|.|.+.|.|.|.+.|++++..+.. ..++.+.... ...+|.|.+++.+|+|.
T Consensus 8 ~~~~~~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 87 (116)
T 2kkq_A 8 HSHEHKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGW 87 (116)
T ss_dssp CCCCCCBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEE
T ss_pred cccCCCCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEE
Confidence 445667789999999999999999999999999999999999999998875 3555554432 23489999999999999
Q ss_pred EEEEEEcC-CCceEEEEEEEEEecCCC
Q psy8425 81 YECRGTGV-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 81 Y~C~a~n~-g~~~~s~~~~l~V~~~p~ 106 (176)
|+|.|.|. |..... +.|.|..+|.
T Consensus 88 Y~C~a~N~~G~~~~~--~~l~V~~~p~ 112 (116)
T 2kkq_A 88 YTVSAVNEAGVTTCN--TRLDVTARPN 112 (116)
T ss_dssp EEEEEEETTEEEEEE--EEEEEECCSC
T ss_pred EEEEEEcCCCeEEEE--EEEEEeCCCC
Confidence 99999999 776666 8999988664
No 28
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.80 E-value=2.2e-18 Score=115.55 Aligned_cols=103 Identities=19% Similarity=0.476 Sum_probs=87.0
Q ss_pred CCccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEe-cceEEEEEcccCCCCCEEE
Q psy8425 3 KGLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFK-KKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y 81 (176)
..+.+..+|.|...+..+.+.+|+.+.|.|.+.|.|.|.+.|+|++..+....++.+... .....|.|.+++..|+|.|
T Consensus 34 ~~~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 113 (154)
T 1fhg_A 34 AEEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKY 113 (154)
T ss_dssp CCCCCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEE
T ss_pred hcccCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEE
Confidence 345677889999998999999999999999999999999999999999988777766543 3356899999999999999
Q ss_pred EEEEEcC-CCceEEEEEEEEEecCCCC
Q psy8425 82 ECRGTGV-HKDVVSAFAEVSINLRPDN 107 (176)
Q Consensus 82 ~C~a~n~-g~~~~s~~~~l~V~~~p~~ 107 (176)
+|.|.|. |....+ +.|.|..+|..
T Consensus 114 ~C~a~N~~G~~~~~--~~l~V~~~p~~ 138 (154)
T 1fhg_A 114 TCKAVNSLGEATCT--AELLVETMGKE 138 (154)
T ss_dssp EEEEEETTEEEEEE--EEEEEECC---
T ss_pred EEEEEECCCeEEEE--EEEEEeCcCcC
Confidence 9999999 776666 89999987764
No 29
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=6.6e-19 Score=109.36 Aligned_cols=95 Identities=24% Similarity=0.387 Sum_probs=80.0
Q ss_pred CCCccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEE
Q psy8425 2 SKGLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 2 s~~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 81 (176)
|..+.+..+|.|...+.+..+.+|+++.|.|.+.|.|.|.+.|++++..+...... ......+|.|.++..+|+|.|
T Consensus 3 s~~~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~---~~~~~~~L~i~~v~~~D~G~Y 79 (99)
T 2yr3_A 3 SGSSGMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARST---CEAGVAELHIQDALPEDHGTY 79 (99)
T ss_dssp CCCSCCCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCE---EETTEEEEEECSCCTTCCBCE
T ss_pred CccCCcccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceE---eeCCeEEEEECCCChhhCEEE
Confidence 44567788999999899999999999999999999999999999999888754322 225668999999999999999
Q ss_pred EEEEEcC-CCceEEEEEEEEE
Q psy8425 82 ECRGTGV-HKDVVSAFAEVSI 101 (176)
Q Consensus 82 ~C~a~n~-g~~~~s~~~~l~V 101 (176)
+|.|.|. |....+ +.|.|
T Consensus 80 ~C~a~N~~g~~~~~--~~l~V 98 (99)
T 2yr3_A 80 TCLAENALGQVSCS--AWVTV 98 (99)
T ss_dssp EEEEECSSCEEEEE--CCEEE
T ss_pred EEEEEECCCeEEEE--EEEEE
Confidence 9999999 776655 66665
No 30
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.79 E-value=4.9e-18 Score=116.84 Aligned_cols=134 Identities=18% Similarity=0.244 Sum_probs=98.0
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecC-CCeeEEEe-CCEEecc-CcceEEEE-ecceEEEEEcccCCCCCEEEEEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNP-LPAVSWFK-DNVEITT-NKRLKIQF-KKKRSTLIITRIRSEDAGRYECRG 85 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p-~p~i~W~~-~g~~l~~-~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a 85 (176)
++.+...+.+..+.+|+.+.|.|.+.+.| .+.+.|++ +|..+.. ..++.+.. ......|.|.+++.+|+|.|.|.+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 45677778888999999999999999977 78999999 8888773 34444332 256789999999999999999999
Q ss_pred EcCCCceEEEEEEEEEecCCC---------------------CCCCCCCCCeE----------------EecCCEEEE--
Q psy8425 86 TGVHKDVVSAFAEVSINLRPD---------------------NMGGPCPLDSY----------------CLNGGSCTY-- 126 (176)
Q Consensus 86 ~n~g~~~~s~~~~l~V~~~p~---------------------~~g~p~p~~~~----------------~~~~~~~~i-- 126 (176)
.|......+..+.|.|..+|. +.|.|.|...+ ...++.|.|
T Consensus 82 ~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~ 161 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRG 161 (191)
T ss_dssp EETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEETT
T ss_pred EcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEEECC
Confidence 998322333337777776554 34556552222 234456777
Q ss_pred --eccCCeeEEEecCCcccC
Q psy8425 127 --YDTVGELVCQCAEGYKGQ 144 (176)
Q Consensus 127 --~~d~g~y~C~~~~n~~g~ 144 (176)
.+|.|.|.|. |.|..|.
T Consensus 162 ~~~~d~G~Y~C~-a~n~~~~ 180 (191)
T 1epf_A 162 IKKTDEGTYRCE-GRILARG 180 (191)
T ss_dssp CCGGGCEEEEEE-EEEGGGT
T ss_pred CChhhCEEEEEE-EEEecce
Confidence 7999999999 8887653
No 31
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.79 E-value=2e-18 Score=127.17 Aligned_cols=136 Identities=22% Similarity=0.370 Sum_probs=96.9
Q ss_pred ccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEe--cceEEEEEcccCC-CCCEEEEE
Q psy8425 7 ATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFK--KKRSTLIITRIRS-EDAGRYEC 83 (176)
Q Consensus 7 v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~--~~~~~L~i~~v~~-~d~G~Y~C 83 (176)
...+|.|...+.++.+.+|+.+.|.|.+.|.|.|.+.|+++|..+.. .++.+... .....|.|.++.. +|+|.|+|
T Consensus 3 ~~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~-~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C 81 (304)
T 2yd9_A 3 GEEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNS-QRFETIEFDESAGAVLRIQPLRTPRDENVYEC 81 (304)
T ss_dssp -CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------C-TTEEEEEETTTTEEEEEECSCCTTTTCSEEEE
T ss_pred CccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCC-CceEEEEecCCCceEEEEecccccCCCeEEEE
Confidence 35789999999999999999999999999999999999999998865 34443322 2247899999998 99999999
Q ss_pred EEEcC-CCceEEEEEEEEEecC-------CC---------------------CCCCCCCCCeE-----------------
Q psy8425 84 RGTGV-HKDVVSAFAEVSINLR-------PD---------------------NMGGPCPLDSY----------------- 117 (176)
Q Consensus 84 ~a~n~-g~~~~s~~~~l~V~~~-------p~---------------------~~g~p~p~~~~----------------- 117 (176)
.+.|. |....+ +.|.|..+ |. ..|.|.|...|
T Consensus 82 ~a~n~~g~~~~~--~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~ 159 (304)
T 2yd9_A 82 VAQNSVGEITVH--AKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIK 159 (304)
T ss_dssp EEECSSCEECCE--EEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEE
T ss_pred EEECCCCeEEEE--EEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEE
Confidence 99998 765555 78888754 22 33455542222
Q ss_pred EecCCEEEE----eccCCeeEEEecCCcccCcC
Q psy8425 118 CLNGGSCTY----YDTVGELVCQCAEGYKGQRC 146 (176)
Q Consensus 118 ~~~~~~~~i----~~d~g~y~C~~~~n~~g~~c 146 (176)
...++.|.| .+|.|.|.|. +.|..|..-
T Consensus 160 ~~~~~~L~i~~~~~~d~G~Y~C~-a~n~~g~~~ 191 (304)
T 2yd9_A 160 QLRSGALQIESSEETDQGKYECV-ATNSAGVRY 191 (304)
T ss_dssp ECTTSCEEECSCCGGGCEEEEEE-EEETTEEEE
T ss_pred eCCCeEEEEccCCcccCEEEEEE-EEeCCCCEE
Confidence 233456777 6899999999 888888543
No 32
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.79 E-value=3.4e-18 Score=105.21 Aligned_cols=90 Identities=12% Similarity=0.091 Sum_probs=77.5
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
..+|.|...+.++.+.+|+++.|.|.+.+ +.|.+.|+|||.++..+.++.+.......+|.|.++..+|+|.|+|.|.|
T Consensus 3 ~~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n 81 (93)
T 1waa_A 3 MALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN 81 (93)
T ss_dssp CCCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETT
T ss_pred CCCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECC
Confidence 35788999999999999999999999986 55789999999999888888877666677999999999999999999987
Q ss_pred CCCceEEEEEEEEEec
Q psy8425 88 VHKDVVSAFAEVSINL 103 (176)
Q Consensus 88 ~g~~~~s~~~~l~V~~ 103 (176)
. ..+ +.|.|.+
T Consensus 82 ~---~~s--a~L~V~~ 92 (93)
T 1waa_A 82 T---KSA--ANLKVKE 92 (93)
T ss_dssp E---EEE--EEEEEEC
T ss_pred C---cEE--EEEEEEc
Confidence 4 334 7888875
No 33
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.79 E-value=2.1e-18 Score=118.89 Aligned_cols=128 Identities=24% Similarity=0.364 Sum_probs=95.5
Q ss_pred CCCeEEeCCceeEEec-CCcEEEEEEEeecCC--CeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEE
Q psy8425 9 IHPIEVSGLRNVSVKL-RQSLRLVCRCKGNPL--PAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRG 85 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~-G~~~~l~C~~~g~p~--p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 85 (176)
.+|.+...+ ...+.+ |+.+.|.|.+.+.|. +.+.|++++..+...... ..+..|.|.+++.+|+|.|+|.+
T Consensus 2 ~~P~i~~~~-~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~-----~~~~~L~i~~~~~~d~G~Y~C~~ 75 (190)
T 2wv3_A 2 NEPRIVTSE-EVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKN-----ASNMEYRINKPRAEDSGEYHCVY 75 (190)
T ss_dssp -CCEEEECC-CEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBC-----CSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCcccccc-eEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceE-----eccEEEEEecCCcccCEEEEEEE
Confidence 478877644 455666 999999999999887 789999999998764332 25678999999999999999999
Q ss_pred EcCCCceEEEEEEEEEecCCC---------------------CCCCCCCCCeEEe--cC--------------------C
Q psy8425 86 TGVHKDVVSAFAEVSINLRPD---------------------NMGGPCPLDSYCL--NG--------------------G 122 (176)
Q Consensus 86 ~n~g~~~~s~~~~l~V~~~p~---------------------~~g~p~p~~~~~~--~~--------------------~ 122 (176)
.|.+....+ +.|.|..+|. +.|.|.|...+.. ++ +
T Consensus 76 ~n~~~~~~~--~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~ 153 (190)
T 2wv3_A 76 HFVSAPKAN--ATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYT 153 (190)
T ss_dssp EETTEEEEE--EEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEE
T ss_pred EeCCccccc--EEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCee
Confidence 998433444 8888887765 4566665333333 11 1
Q ss_pred EEEE----e-ccCCeeEEEecCCcccCc
Q psy8425 123 SCTY----Y-DTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 123 ~~~i----~-~d~g~y~C~~~~n~~g~~ 145 (176)
.|.| . +|.|.|.|. |.|..|..
T Consensus 154 ~L~i~~~~~~~d~G~Y~C~-a~N~~g~~ 180 (190)
T 2wv3_A 154 ELNIVNLQITEDPGEYECN-ATNSIGSA 180 (190)
T ss_dssp EEEECSCCTTTSCEEEEEE-EECSSCEE
T ss_pred EEEEEeccccCCCEEEEEE-EEecCCcc
Confidence 4555 2 899999999 99988864
No 34
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.79 E-value=3.9e-19 Score=125.57 Aligned_cols=135 Identities=20% Similarity=0.379 Sum_probs=100.6
Q ss_pred cCCCeEEeCC----ceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceE-EEEecceEEEEEcccCCCCCEEEE
Q psy8425 8 TIHPIEVSGL----RNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLK-IQFKKKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 8 ~~~p~~~~~~----~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~-~~~~~~~~~L~i~~v~~~d~G~Y~ 82 (176)
..+|.|...+ ....+.+|+++.|.|.+.+.|.+.+.|++++..+....++. ........+|.|.+++.+|+|.|+
T Consensus 13 ~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 92 (231)
T 3ojm_B 13 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYT 92 (231)
T ss_dssp CEEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEE
T ss_pred ccCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEE
Confidence 4577776665 67889999999999999999999999999999987644331 122245568999999999999999
Q ss_pred EEEEcC-CCceEEEEEEEEEecCCC--------------------------CCCCCCCCCeEEe----c-----------
Q psy8425 83 CRGTGV-HKDVVSAFAEVSINLRPD--------------------------NMGGPCPLDSYCL----N----------- 120 (176)
Q Consensus 83 C~a~n~-g~~~~s~~~~l~V~~~p~--------------------------~~g~p~p~~~~~~----~----------- 120 (176)
|.+.|. +..... +.|.|...+. +.|.|.|...+.. +
T Consensus 93 C~~~n~~~~~~~~--~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~ 170 (231)
T 3ojm_B 93 CVVENEYGSINHT--YHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPY 170 (231)
T ss_dssp EEEEETTEEEEEE--EEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBC
T ss_pred EEEecccCccccc--EEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcce
Confidence 999998 665555 7777765321 2355544333333 1
Q ss_pred -------------CCEEEE----eccCCeeEEEecCCcccCc
Q psy8425 121 -------------GGSCTY----YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 121 -------------~~~~~i----~~d~g~y~C~~~~n~~g~~ 145 (176)
++.|.| .+|.|.|.|. +.|..|..
T Consensus 171 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~-a~n~~g~~ 211 (231)
T 3ojm_B 171 LKVLKHSGINSSNAEVLALFNVTEADAGEYICK-VSNYIGQA 211 (231)
T ss_dssp EEEEEECSTTCSCTTEEEECSCCGGGCEEEEEE-EEETTEEE
T ss_pred EeEecccccccCCccEEEEecCCHHHCeEEEEE-EEeccceE
Confidence 234666 6899999999 99998875
No 35
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.79 E-value=4.3e-19 Score=111.81 Aligned_cols=100 Identities=27% Similarity=0.508 Sum_probs=72.1
Q ss_pred CCccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEE
Q psy8425 3 KGLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 82 (176)
..|.+..+|.+...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+....++.+. ....+|.|.++..+|+|.|.
T Consensus 3 ~~v~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~ 80 (108)
T 3kvq_A 3 LTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLK--DGNRNLTIRRVRKEDEGLYT 80 (108)
T ss_dssp --------CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEE--TTTTEEEECSCCGGGCEEEE
T ss_pred eeECccCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEe--CCCcEEEEeecCcccCEEEE
Confidence 3566778999998889999999999999999999999999999999888765554432 45678999999999999999
Q ss_pred EEEEcC-CCceEEEEEEEEEecCCC
Q psy8425 83 CRGTGV-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 83 C~a~n~-g~~~~s~~~~l~V~~~p~ 106 (176)
|.|.|. |....+ +.|.|..+|.
T Consensus 81 C~a~n~~g~~~~~--~~l~V~~~~~ 103 (108)
T 3kvq_A 81 CQACSVLGCAKVE--AFFIIEGAQE 103 (108)
T ss_dssp EEEC----CEEEE--EEEEEEC---
T ss_pred EEEEeCCCceEEE--EEEEEeCCCc
Confidence 999999 877777 8899987654
No 36
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.78 E-value=1.7e-18 Score=106.33 Aligned_cols=89 Identities=17% Similarity=0.334 Sum_probs=75.0
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--EEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--VEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
.+|.|...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++ ..+.... .+........|.|.++..+|+|.|+|.|.
T Consensus 1 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~--~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 78 (93)
T 1wit_A 1 LKPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPEL--LVDAKSSTTSIFFPSAKRADSGNYKLKVK 78 (93)
T ss_dssp CCCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTS--EEEEETTEEEEECTTBCGGGCEEEEEEEE
T ss_pred CCCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcE--EEEecCCEEEEEECCCChhcCEEEEEEEE
Confidence 3788887888899999999999999999999999999999 8776542 33333566889999999999999999999
Q ss_pred cC-CCceEEEEEEEEE
Q psy8425 87 GV-HKDVVSAFAEVSI 101 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V 101 (176)
|. |....+ +.|.|
T Consensus 79 N~~G~~~~~--~~l~V 92 (93)
T 1wit_A 79 NELGEDEAI--FEVIV 92 (93)
T ss_dssp ETTEEEEEE--EEEEE
T ss_pred cCCCeEEEE--EEEEE
Confidence 99 766655 77766
No 37
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.78 E-value=7.1e-19 Score=120.70 Aligned_cols=132 Identities=27% Similarity=0.399 Sum_probs=93.2
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccC--cceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTN--KRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~--~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
+|.|...+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..+... .++.+ ..+.+|.|.+++.+|+|.|+|.+.+
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~~~~ 78 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAM---LANNNLQILNINKSDEGIYRCEGRV 78 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEE---CTTSCEEETTCCGGGCEEEEEEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEE---ecCCCEEEeeCCHhHCcEEEEEEEE
Confidence 688888889999999999999999999999999999999887642 33322 3446799999999999999999999
Q ss_pred C-CCceEEEEEEEEEecCCC-----------------------CCCCCCCCCeEEe---------------cCCEEEE--
Q psy8425 88 V-HKDVVSAFAEVSINLRPD-----------------------NMGGPCPLDSYCL---------------NGGSCTY-- 126 (176)
Q Consensus 88 ~-g~~~~s~~~~l~V~~~p~-----------------------~~g~p~p~~~~~~---------------~~~~~~i-- 126 (176)
. +.......+.+.|..+|. ..|.|.|...+.. .++.+.|
T Consensus 79 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~ 158 (189)
T 2v5t_A 79 EARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRN 158 (189)
T ss_dssp TTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEEEECS
T ss_pred cCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEEEEcC
Confidence 8 554433336666665543 2234444222222 2455766
Q ss_pred --eccCCeeEEEecCCcccCc
Q psy8425 127 --YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 127 --~~d~g~y~C~~~~n~~g~~ 145 (176)
.+|.|.|.|. |.|..|..
T Consensus 159 ~~~~d~G~Y~C~-a~n~~g~~ 178 (189)
T 2v5t_A 159 IINSDGGPYVCR-ATNKAGED 178 (189)
T ss_dssp CCGGGCEEEEEE-EEETTEEE
T ss_pred CChhhCeeEEEE-EEeCCCce
Confidence 6899999999 88888854
No 38
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=3.3e-18 Score=106.37 Aligned_cols=94 Identities=28% Similarity=0.528 Sum_probs=79.8
Q ss_pred ccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEecc-CcceEEEEecceEEEEEcccCCCCCEEEEEEE
Q psy8425 7 ATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITT-NKRLKIQFKKKRSTLIITRIRSEDAGRYECRG 85 (176)
Q Consensus 7 v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~-~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 85 (176)
...+|.|...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ..++.+ ...++|.|.++..+|+|.|+|.|
T Consensus 5 ~~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a 81 (100)
T 2edj_A 5 SSGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATI---QEQGTLQIKNLRISDTGTYTCVA 81 (100)
T ss_dssp CCSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEE---CTTCCEEEESCCTTTCCEEEEEE
T ss_pred CCCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEE---cCCCEEEEccCCcccCEEEEEEE
Confidence 45789999889999999999999999999999999999999988873 333333 34568999999999999999999
Q ss_pred EcC-CCceEEEEEEEEEecCC
Q psy8425 86 TGV-HKDVVSAFAEVSINLRP 105 (176)
Q Consensus 86 ~n~-g~~~~s~~~~l~V~~~p 105 (176)
.|. |....+ +.|.|..+|
T Consensus 82 ~n~~g~~~~~--~~l~V~~~~ 100 (100)
T 2edj_A 82 TSSSGETSWS--AVLDVTESG 100 (100)
T ss_dssp ECSSCCCBCC--EEEEEESCC
T ss_pred EcCCCCEEEE--EEEEEecCC
Confidence 999 877777 889988754
No 39
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.78 E-value=9.4e-19 Score=133.19 Aligned_cols=125 Identities=25% Similarity=0.444 Sum_probs=95.6
Q ss_pred eCCceeEEecCCcEEEEEEEeecCCCeeEEEeC-CEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CCce
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKD-NVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HKDV 92 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~-g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~ 92 (176)
..+..+.+.+|+++.|.|.+.|.|.|.+.|+++ +..+.... . .....+.|.|.+++.+|+|.|+|.|.|. |...
T Consensus 210 ~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~--~--~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~ 285 (384)
T 3kld_A 210 QFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKA--R--RHKSNGILEIPNFQQEDAGSYECVAENSRGKNV 285 (384)
T ss_dssp ECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTC--E--ECTTSCEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred cCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccc--e--ecCCCcEEEECCCChhhCEEEEEEEEcCCCeEE
Confidence 345677889999999999999999999999994 54554321 1 1145678999999999999999999999 7776
Q ss_pred EEEEEEEEEecCCC---------------------CCCCCCCCC-------------eEEecCCEEEE----eccCCeeE
Q psy8425 93 VSAFAEVSINLRPD---------------------NMGGPCPLD-------------SYCLNGGSCTY----YDTVGELV 134 (176)
Q Consensus 93 ~s~~~~l~V~~~p~---------------------~~g~p~p~~-------------~~~~~~~~~~i----~~d~g~y~ 134 (176)
.+ +.|.|..+|. +.|.|.|.. ++.+.+++|.| .+|+|.|+
T Consensus 286 ~~--~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 363 (384)
T 3kld_A 286 AK--GQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQ 363 (384)
T ss_dssp EE--EEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEETTEEEESSCCGGGCEEEE
T ss_pred EE--EEEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEeCCEEEEeecChhhCEEEE
Confidence 66 7888876553 345665522 23345677877 68999999
Q ss_pred EEecCCcccCcC
Q psy8425 135 CQCAEGYKGQRC 146 (176)
Q Consensus 135 C~~~~n~~g~~c 146 (176)
|. |.|..|..-
T Consensus 364 C~-A~N~~G~~~ 374 (384)
T 3kld_A 364 CV-AENKHGVIF 374 (384)
T ss_dssp EE-EEETTEEEE
T ss_pred EE-EEeCCceEE
Confidence 99 999999653
No 40
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.77 E-value=1.1e-17 Score=103.76 Aligned_cols=94 Identities=22% Similarity=0.364 Sum_probs=77.7
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcc-eEEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKR-LKIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
..+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+....+ +.........+|.|.++..+|+|.|+|.|.
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 82 (99)
T 1u2h_A 3 KAPPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAV 82 (99)
T ss_dssp CEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEE
Confidence 3578888888889999999999999999999999999999999876543 222222344589999999999999999999
Q ss_pred cC-CCceEEEEEEEEEec
Q psy8425 87 GV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~~ 103 (176)
|. |....+ +.|.|..
T Consensus 83 N~~g~~~~~--~~l~V~~ 98 (99)
T 1u2h_A 83 NEYGARQCE--ARLEVRG 98 (99)
T ss_dssp ETTEEEEEE--EEEEEEC
T ss_pred ECCCceeEE--EEEEEEC
Confidence 99 776666 7887764
No 41
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.77 E-value=1.6e-18 Score=121.70 Aligned_cols=78 Identities=17% Similarity=0.299 Sum_probs=63.5
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEee-cCCCeeEEEeCCEEeccCcceEEEEec--ceEEEEEcccCCCCCEEEEEEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKG-NPLPAVSWFKDNVEITTNKRLKIQFKK--KRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g-~p~p~i~W~~~g~~l~~~~~~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
+|.|.... +..+.+|+.+.|.|.+.+ .|.|.+.|+|||.++..+.++++.... ...+|.|.++..+|+|.|+|.|.
T Consensus 3 ~p~~~~~~-~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~ 81 (207)
T 3rbs_A 3 DPFTKSEL-AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQ 81 (207)
T ss_dssp ---CCEEE-EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEE
T ss_pred CCeeecCC-ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 45555543 678999999999999864 799999999999999887777776643 44579999999999999999999
Q ss_pred cC
Q psy8425 87 GV 88 (176)
Q Consensus 87 n~ 88 (176)
|.
T Consensus 82 Ng 83 (207)
T 3rbs_A 82 DG 83 (207)
T ss_dssp ET
T ss_pred CC
Confidence 83
No 42
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.77 E-value=9.4e-18 Score=103.99 Aligned_cols=92 Identities=24% Similarity=0.408 Sum_probs=78.1
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEecc--CcceEEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITT--NKRLKIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~--~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
.+|.+...+..+.+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ..++.+.......+|.|.++..+|+|.|+|.|.
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEE
Confidence 467888888889999999999999999999999999999998863 455666554556899999999999999999999
Q ss_pred cC-CCceEEEEEEEEEe
Q psy8425 87 GV-HKDVVSAFAEVSIN 102 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~ 102 (176)
|. |..... +.|.|.
T Consensus 84 n~~g~~~~~--~~l~V~ 98 (100)
T 3irg_A 84 NEFGSDSAT--VNIHIR 98 (100)
T ss_dssp ETTEEEEEE--EEEEEE
T ss_pred eCCCcEEEE--EEEEEE
Confidence 99 776656 777775
No 43
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.77 E-value=1.2e-18 Score=109.80 Aligned_cols=94 Identities=23% Similarity=0.442 Sum_probs=82.6
Q ss_pred ccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 7 ATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 7 v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
...+|.|...+.++.+.+|+++.|.|.+.|.|.|.+.|+++|..+....++.+.......+|.|.++..+|+|.|+|.|.
T Consensus 11 ~~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 90 (106)
T 1nct_A 11 TTLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVE 90 (106)
T ss_dssp SSCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCB
T ss_pred CCCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEE
Confidence 34678899999999999999999999999999999999999999887777777655567899999999999999999999
Q ss_pred cC-CCceEEEEEEEEEe
Q psy8425 87 GV-HKDVVSAFAEVSIN 102 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~ 102 (176)
|. |....+ +.|.|+
T Consensus 91 N~~G~~~~~--~~l~V~ 105 (106)
T 1nct_A 91 NSEGKQEAE--FTLTIQ 105 (106)
T ss_dssp CSSCBCCEE--EEEEEC
T ss_pred eCCCeEEEE--EEEEEE
Confidence 99 877766 777774
No 44
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.77 E-value=2.8e-18 Score=126.19 Aligned_cols=95 Identities=28% Similarity=0.515 Sum_probs=78.6
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccC-cceEEEE-ecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTN-KRLKIQF-KKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~-~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
.+|.|...+.++.+.+|+.+.|.|.+.|.|.+.+.|++++..+... .++.+.. ......|.|.+++.+|+|.|+|.|.
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 82 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEE
Confidence 5899999999999999999999999999999999999999988753 3444432 2345689999999999999999999
Q ss_pred cC-CCceEEEEEEEEEecCC
Q psy8425 87 GV-HKDVVSAFAEVSINLRP 105 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~~~p 105 (176)
|. |....+ +.|.|..+|
T Consensus 83 n~~g~~~~~--~~l~V~~~p 100 (305)
T 2nzi_A 83 NQGGSVSGT--ASLEVEVPA 100 (305)
T ss_dssp ETTEEEEEE--EEEEECEEE
T ss_pred cCCCCccce--EEEEEecCC
Confidence 98 665555 778876543
No 45
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.77 E-value=2.7e-18 Score=122.29 Aligned_cols=93 Identities=20% Similarity=0.413 Sum_probs=73.5
Q ss_pred CCCeEEeC----CceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcce-EEEEecceEEEEEcccCCCCCEEEEE
Q psy8425 9 IHPIEVSG----LRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRL-KIQFKKKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 9 ~~p~~~~~----~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C 83 (176)
.+|.|..+ +..+.+.+|+++.|.|.+.+.|.+.+.|++++..+....+. .........+|.|.+++.+|+|.|+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 89 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC 89 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEE
Confidence 47777654 34678999999999999999999999999999998764332 12223556789999999999999999
Q ss_pred EEEcC-CCceEEEEEEEEEec
Q psy8425 84 RGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 84 ~a~n~-g~~~~s~~~~l~V~~ 103 (176)
.+.|. +..... +.|.|..
T Consensus 90 ~~~~~~~~~~~~--~~l~V~~ 108 (241)
T 3grw_A 90 VVENKFGSIRQT--YTLDVLE 108 (241)
T ss_dssp EEEETTEEEEEE--EEEEEEC
T ss_pred EEeecCCceEEE--EEEEEec
Confidence 99998 665555 7777765
No 46
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.77 E-value=9.2e-19 Score=127.88 Aligned_cols=140 Identities=20% Similarity=0.319 Sum_probs=102.0
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEE
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 83 (176)
.|.+..+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+......+... ..+..|.|.++..+|+|.|+|
T Consensus 94 ~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C 172 (291)
T 1qz1_A 94 NVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIV-LSNNYLQIRGIKKTDEGTYRC 172 (291)
T ss_dssp EEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEE-CTTSCEEETTCCGGGCEEEEE
T ss_pred EEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEE-ccCCcEEEccCccccCeEEEE
Confidence 3566778888888888889999999999999999999999999998875433222222 345689999999999999999
Q ss_pred EEEcC-CCceEEEEEEEEEecCCC-----------------------CCCCCCCCCeEEec-------------------
Q psy8425 84 RGTGV-HKDVVSAFAEVSINLRPD-----------------------NMGGPCPLDSYCLN------------------- 120 (176)
Q Consensus 84 ~a~n~-g~~~~s~~~~l~V~~~p~-----------------------~~g~p~p~~~~~~~------------------- 120 (176)
.+.|. +.......+.|.|..+|. +.|.|.|...|..+
T Consensus 173 ~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~ 252 (291)
T 1qz1_A 173 EGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDD 252 (291)
T ss_dssp EEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECTT
T ss_pred EEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEcCC
Confidence 99997 444333336666655443 23445542222211
Q ss_pred CCEEEE----eccCCeeEEEecCCcccCc
Q psy8425 121 GGSCTY----YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 121 ~~~~~i----~~d~g~y~C~~~~n~~g~~ 145 (176)
+..|.| .+|.|.|.|. |.|..|..
T Consensus 253 ~~~L~i~~v~~~d~G~Y~C~-a~N~~G~~ 280 (291)
T 1qz1_A 253 SSELTIRNVDKNDEAEYVCI-AENKAGEQ 280 (291)
T ss_dssp SCEEEECSCCGGGCEEEEEE-EEETTEEE
T ss_pred CcEEEEEecChhcCEEEEEE-EEeCCCce
Confidence 235666 6899999999 99998864
No 47
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.76 E-value=2.6e-17 Score=101.73 Aligned_cols=89 Identities=16% Similarity=0.321 Sum_probs=77.2
Q ss_pred EEeCCceeEEecCCcEEEEEEEeec-CCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGN-PLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HK 90 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~-p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~ 90 (176)
+...+.++.+.+|+++.|.|.+.|. |.|.+.|++++..+....++.+........|.|.++..+|+|.|.|.|.|. |.
T Consensus 4 v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 83 (97)
T 2bk8_A 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGE 83 (97)
T ss_dssp EECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred eeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCe
Confidence 4556778899999999999999997 999999999999998877877766566679999999999999999999999 77
Q ss_pred ceEEEEEEEEEec
Q psy8425 91 DVVSAFAEVSINL 103 (176)
Q Consensus 91 ~~~s~~~~l~V~~ 103 (176)
...+ +.|.|..
T Consensus 84 ~~~~--~~l~V~~ 94 (97)
T 2bk8_A 84 DSSY--AELFVKG 94 (97)
T ss_dssp EEEE--EEEEETT
T ss_pred EeEE--EEEEEEe
Confidence 6666 7888764
No 48
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.76 E-value=2.2e-18 Score=121.00 Aligned_cols=137 Identities=26% Similarity=0.448 Sum_probs=97.3
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCc--ceEEEEecceE--EEEEcccCCCCCEEEEE
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNK--RLKIQFKKKRS--TLIITRIRSEDAGRYEC 83 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~--~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C 83 (176)
..+|.|...+..+.+.+|+.+.|.|.+.+.|.+.+.|+++|..+.... ..++....... .|.|.+++.+|+|.|+|
T Consensus 7 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 86 (217)
T 2vr9_A 7 YQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWC 86 (217)
T ss_dssp CCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEE
T ss_pred cCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEE
Confidence 468899999999999999999999999999999999999999887642 12222211111 23678899999999999
Q ss_pred EEEcC-CCce-EEEEEEEEEec-CCC---------------------C-CCCCCCCCeEE--------------------
Q psy8425 84 RGTGV-HKDV-VSAFAEVSINL-RPD---------------------N-MGGPCPLDSYC-------------------- 118 (176)
Q Consensus 84 ~a~n~-g~~~-~s~~~~l~V~~-~p~---------------------~-~g~p~p~~~~~-------------------- 118 (176)
.+.|. +... .. +.|.|.. +|. . .|.|.|...|.
T Consensus 87 ~~~n~~g~~~~~~--~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~ 164 (217)
T 2vr9_A 87 VAKNRVGQAVSRH--ASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRV 164 (217)
T ss_dssp EEEETTEEEECCC--EEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSE
T ss_pred EEecCCCcccccc--ceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcE
Confidence 99998 5432 23 5566654 221 2 45555522222
Q ss_pred --ecCCEEEE----eccCCeeEEEecCCcccCcCc
Q psy8425 119 --LNGGSCTY----YDTVGELVCQCAEGYKGQRCE 147 (176)
Q Consensus 119 --~~~~~~~i----~~d~g~y~C~~~~n~~g~~c~ 147 (176)
..++.|.| .+|.|.|.|. |.|..|..-.
T Consensus 165 ~~~~~~~L~i~~~~~~d~G~Y~C~-a~N~~G~~~~ 198 (217)
T 2vr9_A 165 RIVDGGNLLISNVEPIDEGNYKCI-AQNLVGTRES 198 (217)
T ss_dssp EEETTTEEEESSCCSTTCEEEEEE-EEETTEEEEC
T ss_pred EecCCCcEEEeeCCHHHCeEEEEE-EEcccceecc
Confidence 23456776 6899999999 9999996543
No 49
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.76 E-value=7.7e-18 Score=117.41 Aligned_cols=131 Identities=21% Similarity=0.330 Sum_probs=96.7
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEec------------cCcceEEEEecceEEEEEcccCCCC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEIT------------TNKRLKIQFKKKRSTLIITRIRSED 77 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~------------~~~~~~~~~~~~~~~L~i~~v~~~d 77 (176)
|+.+...+..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+. ...++.+ ....|.|.+++.+|
T Consensus 1 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~----~~~~L~i~~v~~~D 76 (212)
T 1f97_A 1 KGSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTF----SSSGITFSSVTRKD 76 (212)
T ss_dssp CCEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEE----ETTEEEESCCCGGG
T ss_pred CceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEe----eceeEEEcccCccc
Confidence 3456677788899999999999999998999999999775521 1233322 12789999999999
Q ss_pred CEEEEEEEEcC-CCceEEEEEEEEEecCCC----------------------CCCCCCCCCeEEec--------------
Q psy8425 78 AGRYECRGTGV-HKDVVSAFAEVSINLRPD----------------------NMGGPCPLDSYCLN-------------- 120 (176)
Q Consensus 78 ~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p~----------------------~~g~p~p~~~~~~~-------------- 120 (176)
+|.|+|.+.|. +....+..+.|.|..+|. ..|.|.|...+..+
T Consensus 77 ~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~ 156 (212)
T 1f97_A 77 NGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRA 156 (212)
T ss_dssp CEEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBS
T ss_pred CeEEEEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCccccccccccccc
Confidence 99999999998 633333338888887765 34566553233222
Q ss_pred -----------CCEEEE----eccCCeeEEEecCCcccCc
Q psy8425 121 -----------GGSCTY----YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 121 -----------~~~~~i----~~d~g~y~C~~~~n~~g~~ 145 (176)
++.|.| .+|.|.|.|. |.|..|..
T Consensus 157 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~-a~n~~g~~ 195 (212)
T 1f97_A 157 FMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQ-AQNGYGTA 195 (212)
T ss_dssp CSSSCEEECTTTCCEEESSCCGGGCEEEEEE-EECSSSCC
T ss_pred ccCceeEecCCCceEEEEecChhhCcEEEEE-EccccCCc
Confidence 345666 6899999999 99999976
No 50
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=4.5e-18 Score=107.58 Aligned_cols=98 Identities=20% Similarity=0.351 Sum_probs=82.3
Q ss_pred ccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEecc-CcceEEEEe-cceEEEEEcccCCCCCEEEEEE
Q psy8425 7 ATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITT-NKRLKIQFK-KKRSTLIITRIRSEDAGRYECR 84 (176)
Q Consensus 7 v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~-~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~ 84 (176)
...+|.|...+..+.+.+|+.+.|.|.+.|.|.|.+.|+|++..+.. ..++.+... .....|.|.+++.+|+|.|+|.
T Consensus 5 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 84 (110)
T 2dm2_A 5 SSGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIM 84 (110)
T ss_dssp CSCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEE
T ss_pred CCCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEE
Confidence 45688888888889999999999999999999999999999998875 455555443 2334899999999999999999
Q ss_pred EEcC-CCceEEEEEEEEEecCCC
Q psy8425 85 GTGV-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 85 a~n~-g~~~~s~~~~l~V~~~p~ 106 (176)
|.|. |..... +.|.|..+|.
T Consensus 85 a~N~~g~~~~~--~~l~V~~~~~ 105 (110)
T 2dm2_A 85 AANPQGRISCT--GRLMVQAVNS 105 (110)
T ss_dssp EECTTCCEEEC--CCEEEECCSC
T ss_pred EEECCCeEEEE--EEEEEECCCC
Confidence 9999 777666 8899987654
No 51
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.76 E-value=7.9e-18 Score=101.63 Aligned_cols=82 Identities=27% Similarity=0.406 Sum_probs=70.3
Q ss_pred CceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcCCCceEEEE
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGVHKDVVSAF 96 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~s~~ 96 (176)
..++.+.+|+.+.|.|.+.+ |.|.+.|+|||.++..+.++.+.......+|.|.++..+|+|.|+|.|.|. ..+
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~---~~~-- 76 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQD---SRI-- 76 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTT---CEE--
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCE---EEE--
Confidence 45788999999999999866 889999999999999888888877667789999999999999999998553 445
Q ss_pred EEEEEecC
Q psy8425 97 AEVSINLR 104 (176)
Q Consensus 97 ~~l~V~~~ 104 (176)
+.|.|.+|
T Consensus 77 a~l~V~eP 84 (84)
T 2lu7_A 77 FLVSVEEP 84 (84)
T ss_dssp EEEEECCC
T ss_pred EEEEEECC
Confidence 78888754
No 52
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.76 E-value=9.9e-18 Score=105.03 Aligned_cols=95 Identities=17% Similarity=0.211 Sum_probs=74.2
Q ss_pred ccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEE--e---cceEEEEEcccCCCCCEEE
Q psy8425 7 ATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQF--K---KKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 7 v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~--~---~~~~~L~i~~v~~~d~G~Y 81 (176)
|..||.+..... ...++.+.|.|.+.|.|.|.+.|+|+|..+..+.+..... . ...++|.|.++..+|+|.|
T Consensus 1 V~~pP~i~~~~~---~~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 77 (103)
T 1wwb_X 1 VHFAPTITFLES---PTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDY 77 (103)
T ss_dssp CCCCCCCCCCCC---CCCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEE
T ss_pred CCCCCEEEeccC---ceECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEE
Confidence 456777643322 3458889999999999999999999999998765543322 1 1245699999999999999
Q ss_pred EEEEEcC-CCceEEEEEEEEEecCCC
Q psy8425 82 ECRGTGV-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 82 ~C~a~n~-g~~~~s~~~~l~V~~~p~ 106 (176)
+|.|.|. |....+ +.|.|..+|.
T Consensus 78 ~C~A~N~~G~~~~~--~~l~V~~~P~ 101 (103)
T 1wwb_X 78 TLIAKNEYGKDEKQ--ISAHFMGWPG 101 (103)
T ss_dssp EEEEECSSCEEEEE--EEECCSCCCC
T ss_pred EEEEEeCCCcEeEE--EEEEECCCCC
Confidence 9999999 887777 8888887664
No 53
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=2.8e-18 Score=108.43 Aligned_cols=97 Identities=24% Similarity=0.427 Sum_probs=82.2
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEe-cceEEEEEcccCCCCCEEEEEEEE
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFK-KKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
..+|.|...+..+.+.+|+.+.|.|.+.+.|.|.+.|++++..+....+..+... ....+|.|.+++.+|+|.|+|.|.
T Consensus 7 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm3_A 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIAT 86 (110)
T ss_dssp CCCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEE
T ss_pred CCCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEE
Confidence 4689999999999999999999999999999999999999998876555444332 334689999999999999999999
Q ss_pred cC-CCceEEEEEEEEEecCCC
Q psy8425 87 GV-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~~~p~ 106 (176)
|. |....+ +.|.|..+|.
T Consensus 87 n~~g~~~~~--~~l~V~~~p~ 105 (110)
T 2dm3_A 87 NRAGQNSFS--LELVVAAKES 105 (110)
T ss_dssp CSSCEEEEC--CEEEEECCCC
T ss_pred CCCCEEEEE--EEEEEeCCCC
Confidence 99 776666 8899988665
No 54
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.75 E-value=1.7e-18 Score=137.13 Aligned_cols=140 Identities=11% Similarity=0.071 Sum_probs=103.4
Q ss_pred CccccCCCeEEeCC--ceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEE
Q psy8425 4 GLRATIHPIEVSGL--RNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 4 ~l~v~~~p~~~~~~--~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 81 (176)
.|.|..+|.+...+ ..+.+.+|+.+.|.|.+.|.|.|.+.|+|+|..+....+.. .....|.|.+++.+|+|.|
T Consensus 318 ~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~----~~~~~L~I~~v~~~D~G~Y 393 (527)
T 3qs9_E 318 LVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGL----DNGYSISKFCNHKHQPGEY 393 (527)
T ss_dssp EEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBC----SSSSEEEEECCCTTCCSCE
T ss_pred EEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccc----cCCcEEEEecCCcccCEEE
Confidence 46677778765443 34678899999999999999999999999999987644321 2456899999999999999
Q ss_pred EEEEEcC-CCceEEEEEEEEEecCCC-------------CCCCCCCCCeEEecCCE------------------------
Q psy8425 82 ECRGTGV-HKDVVSAFAEVSINLRPD-------------NMGGPCPLDSYCLNGGS------------------------ 123 (176)
Q Consensus 82 ~C~a~n~-g~~~~s~~~~l~V~~~p~-------------~~g~p~p~~~~~~~~~~------------------------ 123 (176)
+|.|.|. |....+ +.|.|..+|. +.|.|.|...|..+++.
T Consensus 394 tC~A~N~~g~~~~~--~~L~V~~~P~i~~~~~~~~l~C~a~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (527)
T 3qs9_E 394 IFHAENDDAQFTKM--FTLNIRRKPQVLAEASASQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQ 471 (527)
T ss_dssp EEEEEETTEEEEEE--EEEC--CCCEEEECCCCE---EEEECSSCCEEEEECCC-----CCCCCCCCEEEC---------
T ss_pred EEEEEeCCCcEEEE--EEEEEecCCeEEEeCCCCEEEEEEEEEcCCeEEEEECCCCcCCCccccccccceeccccccCCc
Confidence 9999999 777666 8999998886 36788774444322211
Q ss_pred ------EEE--eccCCeeEEEecCCcccCcCcccc
Q psy8425 124 ------CTY--YDTVGELVCQCAEGYKGQRCESKD 150 (176)
Q Consensus 124 ------~~i--~~d~g~y~C~~~~n~~g~~c~~~~ 150 (176)
+.+ .+|+|.|.|. |.|..|.......
T Consensus 472 ~~~~s~L~i~~~~d~G~Y~C~-A~N~~G~~~~~~~ 505 (527)
T 3qs9_E 472 WVSSSTLNMSEAIKGFLVKCC-AYNSLGTSCETIL 505 (527)
T ss_dssp CEEEEECCCCCSSCSCEEEEE-EECSSCEEEEEEE
T ss_pred eEEEEEEEEEEcCCCEEEEEE-EEeCCCCceeEEE
Confidence 111 4799999999 9999998765443
No 55
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.75 E-value=1.3e-17 Score=117.55 Aligned_cols=127 Identities=24% Similarity=0.388 Sum_probs=95.4
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
..+.|...+.++.+.+|+.+.|.|.+.+.|.+.+.|++++..+... ....|.|.+++..|+|.|+|.+.|.
T Consensus 17 ~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~---------~~~~L~i~~v~~~d~G~Y~C~~~n~ 87 (218)
T 3k0w_A 17 RGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG---------NTSELIFNAVHVKDAGFYVCRVNNN 87 (218)
T ss_dssp --CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTC---------CSSEEEETTCCGGGCEEEEEEEECT
T ss_pred CCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCC---------CCCEEEEccCChhhCeEeEEEEEcC
Confidence 4677888899999999999999999999999999999999988763 3468999999999999999999998
Q ss_pred -CCceEEEEEEEEEecCC---------------C---------------------CCCCCCCCCeEEec--------CCE
Q psy8425 89 -HKDVVSAFAEVSINLRP---------------D---------------------NMGGPCPLDSYCLN--------GGS 123 (176)
Q Consensus 89 -g~~~~s~~~~l~V~~~p---------------~---------------------~~g~p~p~~~~~~~--------~~~ 123 (176)
+.. .+..+.|.|...+ . +.|.|.|...|..+ .+.
T Consensus 88 ~~~~-~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~~~~ 166 (218)
T 3k0w_A 88 FTFE-FSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKL 166 (218)
T ss_dssp TCCE-ECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCCSSE
T ss_pred CCCc-eeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCCCCE
Confidence 533 2222677776542 1 23445443333332 245
Q ss_pred EEE----eccCCeeEEEecCCcccCcC
Q psy8425 124 CTY----YDTVGELVCQCAEGYKGQRC 146 (176)
Q Consensus 124 ~~i----~~d~g~y~C~~~~n~~g~~c 146 (176)
+.| .+|.|.|.|. |.|..|..-
T Consensus 167 L~i~~v~~~d~G~Y~C~-a~n~~g~~~ 192 (218)
T 3k0w_A 167 YMVPYVDLEHQGTYWCH-VYNDRDSQD 192 (218)
T ss_dssp EEESSCCGGGCEEEEEE-EECSSCEEE
T ss_pred EEEeecChhcCEEEEEE-EEcCCCCce
Confidence 666 6899999999 889887643
No 56
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.75 E-value=5.5e-18 Score=123.76 Aligned_cols=141 Identities=26% Similarity=0.355 Sum_probs=100.2
Q ss_pred ccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEE
Q psy8425 5 LRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECR 84 (176)
Q Consensus 5 l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 84 (176)
|.+..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+......+... ..+..|.|.++..+|+|.|+|.
T Consensus 93 l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~ 171 (291)
T 2wim_A 93 LEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAM-LANNNLQILNINKSDEGIYRCE 171 (291)
T ss_dssp EEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEE-CTTSCEEETTCCGGGCEEEEEE
T ss_pred EEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEE-ccCCCEEEEecchhhCEEEEEE
Confidence 456667777767777889999999999999999999999999998876422222222 3456799999999999999999
Q ss_pred EEcC-CCceEEEEEEEEEecCCC-----------------------CCCCCCCCCeEEe---------------cCCEEE
Q psy8425 85 GTGV-HKDVVSAFAEVSINLRPD-----------------------NMGGPCPLDSYCL---------------NGGSCT 125 (176)
Q Consensus 85 a~n~-g~~~~s~~~~l~V~~~p~-----------------------~~g~p~p~~~~~~---------------~~~~~~ 125 (176)
+.|. +.......+.+.|..+|. +.|.|.|...|.. .++.|.
T Consensus 172 ~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~L~ 251 (291)
T 2wim_A 172 GRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELT 251 (291)
T ss_dssp EEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEECSTTCEEE
T ss_pred EEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEcCCccEEE
Confidence 9998 554444336777777665 3455655222222 235576
Q ss_pred E----eccCCeeEEEecCCcccCcCc
Q psy8425 126 Y----YDTVGELVCQCAEGYKGQRCE 147 (176)
Q Consensus 126 i----~~d~g~y~C~~~~n~~g~~c~ 147 (176)
| .+|+|.|.|. |.|..|..-.
T Consensus 252 i~~~~~~d~G~Y~C~-a~N~~G~~~~ 276 (291)
T 2wim_A 252 VRNIINSDGGPYVCR-ATNKAGEDEK 276 (291)
T ss_dssp EESCCSTTCEEEEEE-EEETTEEEEE
T ss_pred EeeCCcccCEEEEEE-EEECCCceee
Confidence 6 6899999999 9999996543
No 57
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.75 E-value=6.1e-18 Score=103.64 Aligned_cols=79 Identities=16% Similarity=0.347 Sum_probs=67.4
Q ss_pred CCCeEEeCCcee--EEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 9 IHPIEVSGLRNV--SVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 9 ~~p~~~~~~~~~--~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
.||.|+.++++. .+.+|+.+.|.|.+.+ |.|.+.|+|||.++..+.++.+.......+|.|.++..+|+|.|+|.|.
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAG 81 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECS
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEc
Confidence 567777776654 4568999999999865 8889999999999998888888777777899999999999999999997
Q ss_pred cC
Q psy8425 87 GV 88 (176)
Q Consensus 87 n~ 88 (176)
|.
T Consensus 82 n~ 83 (91)
T 2lvc_A 82 DE 83 (91)
T ss_dssp SC
T ss_pred ce
Confidence 74
No 58
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.75 E-value=4.6e-17 Score=114.34 Aligned_cols=95 Identities=20% Similarity=0.318 Sum_probs=79.8
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccC--cceEEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTN--KRLKIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~--~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
.+|.| ..+.++.+.+|+.+.|.|.+.|.|.|.+.|+|+|..+... .++.+........|.|.++..+|+|.|.|.|.
T Consensus 18 ~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 96 (215)
T 3mtr_A 18 YAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAV 96 (215)
T ss_dssp EEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEE
T ss_pred cCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEE
Confidence 46777 4666789999999999999999999999999999998765 34555544567899999999999999999999
Q ss_pred cC-CCceEEEEEEEEEecCCC
Q psy8425 87 GV-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~~~p~ 106 (176)
|. |..... +.|.|..+|.
T Consensus 97 n~~g~~~~~--~~l~v~~~P~ 115 (215)
T 3mtr_A 97 NRIGQESLE--FILVQADTPS 115 (215)
T ss_dssp CSSCEEEEE--EEEEECCCCC
T ss_pred ECCCceEEE--EEEEECCCCC
Confidence 99 777666 8888877665
No 59
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.75 E-value=6e-17 Score=102.87 Aligned_cols=98 Identities=26% Similarity=0.353 Sum_probs=81.3
Q ss_pred CCCccccC-CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEE
Q psy8425 2 SKGLRATI-HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 2 s~~l~v~~-~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 80 (176)
+..|.|.. ||.|...+.++.+.+|+++.|.|.+.+. |.+.|+|++..+..+.++.+........|.|.++..+|+|.
T Consensus 10 ~~~l~V~~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 87 (113)
T 2edh_A 10 SAMLTVRALPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGE 87 (113)
T ss_dssp CCCCCCCCSCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEE
T ss_pred EEEEEEEcCCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCEE
Confidence 34577774 5588888889999999999999999764 78999999999988788877765666789999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEEecCCC
Q psy8425 81 YECRGTGVHKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 81 Y~C~a~n~g~~~~s~~~~l~V~~~p~ 106 (176)
|.|.| +....+ +.|.|..+|.
T Consensus 88 Y~C~a---~~~~~~--~~l~V~~~p~ 108 (113)
T 2edh_A 88 YLCMC---GKERTS--AMLTVRAMPS 108 (113)
T ss_dssp EEEEE---TTEEEE--EEEEECCCCC
T ss_pred EEEEe---CCCCEE--EEEEEeCCCC
Confidence 99999 444555 8899988764
No 60
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=6.7e-18 Score=107.79 Aligned_cols=106 Identities=17% Similarity=0.238 Sum_probs=85.2
Q ss_pred CCCccccCCC-eEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEe-cceEEEEEcccCCCCCE
Q psy8425 2 SKGLRATIHP-IEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFK-KKRSTLIITRIRSEDAG 79 (176)
Q Consensus 2 s~~l~v~~~p-~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~-~~~~~L~i~~v~~~d~G 79 (176)
+..|.|..+| .|...+.++.+.+|+++.|.|.+.|.|.|.+.|+|+|..+..+.++.+... .....|.|.++..+|+|
T Consensus 4 ~a~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 83 (115)
T 2cr6_A 4 GSSGLVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSG 83 (115)
T ss_dssp CCCCCCCSSCCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCE
T ss_pred cEEEEEcCCCCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCE
Confidence 4567787766 688888999999999999999999999999999999999987766655422 34568999999999999
Q ss_pred EEEEEEEcCCCceEEEEEEEEEecCCCCCCCCC
Q psy8425 80 RYECRGTGVHKDVVSAFAEVSINLRPDNMGGPC 112 (176)
Q Consensus 80 ~Y~C~a~n~g~~~~s~~~~l~V~~~p~~~g~p~ 112 (176)
.|+|.+ |....+ +.|.|..+|...-.|.
T Consensus 84 ~Y~C~~---g~~~~~--~~L~V~~~p~~~~~~~ 111 (115)
T 2cr6_A 84 TIYFEA---GDQRAS--AALRVTEKPSVFSRSG 111 (115)
T ss_dssp EEEEEE---TTEECC--EEEEEECCSSCCSSSC
T ss_pred EEEEEE---CCeeEE--EEEEEECCCceeccCC
Confidence 999994 333444 8899998887554443
No 61
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.74 E-value=1.2e-17 Score=114.38 Aligned_cols=124 Identities=13% Similarity=0.138 Sum_probs=88.9
Q ss_pred eeEEecCCcEEEEEEEee--cCCCeeEEEeCCEEec----------cCcceEEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 19 NVSVKLRQSLRLVCRCKG--NPLPAVSWFKDNVEIT----------TNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 19 ~~~v~~G~~~~l~C~~~g--~p~p~i~W~~~g~~l~----------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
.+.+.+|+++.|.|...+ .+.+.+.|+|++..+. ...++.+ ..+++|.|.+++.+|+|.|.|.+.
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~---~~~gsL~I~~v~~~D~G~Y~C~~~ 81 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEI---LANGDLKIKNLTRDDSGTYNVTVY 81 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEE---CTTSCEEESSCCGGGCEEEEEEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEE---CCCCcEEEcccccccCEEEEEEEE
Confidence 467889999999995433 5567899999997553 2344444 234569999999999999999999
Q ss_pred cC-CCceEEEEEEEEEecCCC----------------CCCCCCCCCeEEecCCEEEE----------eccCCeeEEEecC
Q psy8425 87 GV-HKDVVSAFAEVSINLRPD----------------NMGGPCPLDSYCLNGGSCTY----------YDTVGELVCQCAE 139 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~~~p~----------------~~g~p~p~~~~~~~~~~~~i----------~~d~g~y~C~~~~ 139 (176)
|. |....+..+.|.|..++. +.|.|.|...+..+|..+.. .+|.|.|.|. |.
T Consensus 82 n~~g~~~~~~~~~l~V~~~~~~p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~~~i~~~~~~d~G~Y~C~-a~ 160 (176)
T 1hng_A 82 STNGTRILNKALDLRILEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQWTNLRAPFKCK-AV 160 (176)
T ss_dssp ETTCCEEEEEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESSSEEEEECSCCSSCEEEE-EE
T ss_pred eCCCCEEEEEEEEEEEeCCCCCCEEEecCCcEEEEEEecCCCCcEEEEEECCEECCCCCcEEEEEEEccCCeEEEEE-EE
Confidence 99 665233337788876432 56677665556555543321 6899999999 99
Q ss_pred CcccCcC
Q psy8425 140 GYKGQRC 146 (176)
Q Consensus 140 n~~g~~c 146 (176)
|..|..-
T Consensus 161 N~~g~~~ 167 (176)
T 1hng_A 161 NRVSQES 167 (176)
T ss_dssp ETTEEEE
T ss_pred ecCCCce
Confidence 9988653
No 62
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.74 E-value=5.8e-18 Score=118.11 Aligned_cols=134 Identities=22% Similarity=0.431 Sum_probs=94.5
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcc----eEEEEecce---EEEEEcccCCCCCEEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKR----LKIQFKKKR---STLIITRIRSEDAGRY 81 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~----~~~~~~~~~---~~L~i~~v~~~d~G~Y 81 (176)
.+|.|...+.++.+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ......... ..|.|.+++.+|+|.|
T Consensus 8 ~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 87 (212)
T 2v9r_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVY 87 (212)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEE
T ss_pred CCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEE
Confidence 578888889999999999999999999999999999999998864321 111111111 1234456789999999
Q ss_pred EEEEEcC-CCc-eEEEEEEEEEecCCC----------------------C-CCCCCCCCe--------------EEecCC
Q psy8425 82 ECRGTGV-HKD-VVSAFAEVSINLRPD----------------------N-MGGPCPLDS--------------YCLNGG 122 (176)
Q Consensus 82 ~C~a~n~-g~~-~~s~~~~l~V~~~p~----------------------~-~g~p~p~~~--------------~~~~~~ 122 (176)
+|.+.|. +.. ... +.|.|...|. + .|.|.|... ....++
T Consensus 88 ~C~~~n~~g~~~~~~--~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~ 165 (212)
T 2v9r_A 88 VCVARNYLGEAVSHD--ASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGG 165 (212)
T ss_dssp EEEEEETTEEEECCC--EEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEETT
T ss_pred EEEEECCCCceeecc--eEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEccCC
Confidence 9999998 443 223 6666654321 2 455655222 223455
Q ss_pred EEEE----eccCCeeEEEecCCcccCc
Q psy8425 123 SCTY----YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 123 ~~~i----~~d~g~y~C~~~~n~~g~~ 145 (176)
.+.| .+|.|.|.|. +.|..|..
T Consensus 166 ~L~i~~~~~~d~G~Y~C~-a~N~~g~~ 191 (212)
T 2v9r_A 166 KLMITYTRKSDAGKYVCV-GTNMVGER 191 (212)
T ss_dssp EEEESSCCGGGCEEEEEE-EEETTEEE
T ss_pred eEEEeeCCHhhCeeEEEE-EecccCce
Confidence 6777 6899999999 99988864
No 63
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=2e-17 Score=103.34 Aligned_cols=93 Identities=18% Similarity=0.319 Sum_probs=80.3
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
..||.|...+.++.+.+|+++.|.|.+.+ |.+.+.|+|++..+....++.+........|.|.++..+|+|.|+|.|.|
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (103)
T 2edf_A 6 SGPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA 84 (103)
T ss_dssp CCCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS
T ss_pred CCCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc
Confidence 45788888888999999999999999997 88899999999999887787777656677899999999999999999998
Q ss_pred CCCceEEEEEEEEEecCCC
Q psy8425 88 VHKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 88 ~g~~~~s~~~~l~V~~~p~ 106 (176)
. ..+ +.|.|..+|.
T Consensus 85 ~---~~~--~~l~V~~~p~ 98 (103)
T 2edf_A 85 S---KST--ASLHVEEKAS 98 (103)
T ss_dssp C---EEE--EEEEECCCSS
T ss_pred C---CcE--EEEEEeCCCC
Confidence 2 445 8899988665
No 64
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.74 E-value=3.2e-17 Score=102.52 Aligned_cols=91 Identities=26% Similarity=0.432 Sum_probs=76.4
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCc--ceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNK--RLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
|+.|...+.++.+.+|+++.|.|.+.+ |.+.+.|+|++..+.... ++.+........|.|.+++.+|+|.|+|.|.|
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 85 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG 85 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT
T ss_pred CceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC
Confidence 444777888899999999999999987 779999999999998776 55776656668999999999999999999987
Q ss_pred CCCceEEEEEEEEEecCCC
Q psy8425 88 VHKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 88 ~g~~~~s~~~~l~V~~~p~ 106 (176)
...+ +.|.|..+|.
T Consensus 86 ---~~~~--~~l~V~~~p~ 99 (103)
T 1x44_A 86 ---GQSS--AKLSVDLKSG 99 (103)
T ss_dssp ---EEEE--EEEEEECCCS
T ss_pred ---CcEE--EEEEEeCCCC
Confidence 2444 8888887664
No 65
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.74 E-value=6.3e-17 Score=100.62 Aligned_cols=92 Identities=20% Similarity=0.282 Sum_probs=78.4
Q ss_pred CCCeEEeCCce-eEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 9 IHPIEVSGLRN-VSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 9 ~~p~~~~~~~~-~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
.+|.|...+.+ ..+.+|+++.|.|.+. .|.|.+.|+|+|..+....++.+........|.|.++..+|+|.|.|.|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a-- 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA-- 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE--
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE--
Confidence 57888888776 6888999999999998 7889999999999998877887776566678999999999999999999
Q ss_pred CCCceEEEEEEEEEecCCC
Q psy8425 88 VHKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 88 ~g~~~~s~~~~l~V~~~p~ 106 (176)
+....+ +.|.|..+|.
T Consensus 83 -g~~~~~--~~l~V~~~P~ 98 (100)
T 2yuv_A 83 -GDEKCS--TELFVRSGPS 98 (100)
T ss_dssp -TTEEEE--EEEEECCSCC
T ss_pred -CCceEE--EEEEEecCCC
Confidence 444555 8899988764
No 66
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.74 E-value=9.2e-18 Score=129.61 Aligned_cols=135 Identities=17% Similarity=0.229 Sum_probs=96.2
Q ss_pred ccccCCCeEEeCCceeEEecCCcEEEEEEEee-cCCCeeEEEeCCEEeccCcceEEE-E-----ecceEEEEEcccCCCC
Q psy8425 5 LRATIHPIEVSGLRNVSVKLRQSLRLVCRCKG-NPLPAVSWFKDNVEITTNKRLKIQ-F-----KKKRSTLIITRIRSED 77 (176)
Q Consensus 5 l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g-~p~p~i~W~~~g~~l~~~~~~~~~-~-----~~~~~~L~i~~v~~~d 77 (176)
|.|..+|.+ .+.+..+.+|+.+.|.|.+.| .|.|.+.|+|+|..+.....+... . .....+|.|.+++.+|
T Consensus 224 l~V~~~p~~--~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 301 (423)
T 3qs7_E 224 IDLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARND 301 (423)
T ss_dssp EESSSCCCS--STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTT
T ss_pred EEEecCCcc--CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHH
Confidence 445555543 455778999999999999999 677999999999887654322111 1 1234579999999999
Q ss_pred CEEEEEEEEcCCCceEEEEEEEEEecCCC-----------------------CCCCCCCCCeEEecCCEE----------
Q psy8425 78 AGRYECRGTGVHKDVVSAFAEVSINLRPD-----------------------NMGGPCPLDSYCLNGGSC---------- 124 (176)
Q Consensus 78 ~G~Y~C~a~n~g~~~~s~~~~l~V~~~p~-----------------------~~g~p~p~~~~~~~~~~~---------- 124 (176)
+|.|+|.|.|. ...+ +.|.|..+|. +.|.|.|...|..+|..+
T Consensus 302 ~G~Y~C~A~N~--~~~~--~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~ 377 (423)
T 3qs7_E 302 TGYYTCSSSKH--PSQS--ALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNG 377 (423)
T ss_dssp CEEEEEEETTE--EEEE--EEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSS
T ss_pred CEEEEEEEecC--CCce--EEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCccccccCC
Confidence 99999999997 4444 8888876553 335565544555544333
Q ss_pred -EE------eccCCeeEEEecCCcccCcC
Q psy8425 125 -TY------YDTVGELVCQCAEGYKGQRC 146 (176)
Q Consensus 125 -~i------~~d~g~y~C~~~~n~~g~~c 146 (176)
.+ .+|+|.|+|. |.|..|..-
T Consensus 378 ~~~~~~~~~~~D~G~YtC~-A~N~~G~~~ 405 (423)
T 3qs7_E 378 YSISKFCNHKHQPGEYIFH-AENDDAQFT 405 (423)
T ss_dssp SEEEEECCCTTCCSCEEEE-EEETTEEEE
T ss_pred cEEEEEecccccCEEEEEE-EEcCCceEE
Confidence 11 4799999999 999999653
No 67
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.74 E-value=1.7e-16 Score=115.74 Aligned_cols=132 Identities=22% Similarity=0.340 Sum_probs=100.0
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEe-CCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFK-DNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~-~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
.+|.+...+.++.+.+|+.+.|.|.+.+.|. .+.|++ +|..+....++.+........|.|.++..+|+|.|+|.+.|
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n 81 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATD 81 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEec
Confidence 4788888899999999999999999998875 899999 78777776777666555667999999999999999999999
Q ss_pred C-CCceEEEEEEEEEecCCC---------------------CCCCCCCCCeE----------------EecCCEEEE---
Q psy8425 88 V-HKDVVSAFAEVSINLRPD---------------------NMGGPCPLDSY----------------CLNGGSCTY--- 126 (176)
Q Consensus 88 ~-g~~~~s~~~~l~V~~~p~---------------------~~g~p~p~~~~----------------~~~~~~~~i--- 126 (176)
. +... +..+.|.|..+|. ..|.|.|...+ ...++.+.|
T Consensus 82 ~~g~~~-~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v 160 (291)
T 2wim_A 82 AKGQTQ-EATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNI 160 (291)
T ss_dssp SSSCEE-EEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETTC
T ss_pred ccCceE-EEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEec
Confidence 8 5442 3227777776554 33444442122 223456666
Q ss_pred -eccCCeeEEEecCCccc
Q psy8425 127 -YDTVGELVCQCAEGYKG 143 (176)
Q Consensus 127 -~~d~g~y~C~~~~n~~g 143 (176)
.+|.|.|.|. +.|..+
T Consensus 161 ~~~d~G~Y~C~-~~n~~~ 177 (291)
T 2wim_A 161 NKSDEGIYRCE-GRVEAR 177 (291)
T ss_dssp CGGGCEEEEEE-EEETTT
T ss_pred chhhCEEEEEE-EEECCC
Confidence 6899999999 766654
No 68
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.73 E-value=1.8e-17 Score=115.97 Aligned_cols=121 Identities=16% Similarity=0.241 Sum_probs=88.2
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCe-eEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPA-VSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~-i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
..+|.+...+....+.+|+++.|.|.+.+.|.+. +.|+|+|..+... ...|.|.+++.+|+|.|+|.+.
T Consensus 5 ~p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~----------~~~L~i~~v~~~D~G~Y~C~a~ 74 (204)
T 3sgj_C 5 LPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQ----------ASSYFIDAATVDDSGEYRCQTQ 74 (204)
T ss_dssp -CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCC----------SSEEEESSCCGGGCEEEEEEET
T ss_pred CCCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccC----------ccEEEEecccccCCEEEEEEeC
Confidence 3467777777778899999999999999998875 9999999987652 2689999999999999999999
Q ss_pred cC-CCceEEEEEEEEEecCCC--------------------CCCC-CCCCCeEEec---------CCEEEE----eccCC
Q psy8425 87 GV-HKDVVSAFAEVSINLRPD--------------------NMGG-PCPLDSYCLN---------GGSCTY----YDTVG 131 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~~~p~--------------------~~g~-p~p~~~~~~~---------~~~~~i----~~d~g 131 (176)
|. ... . +.|.|..+|. +.+. |.+...+..+ ++.+.| .+|+|
T Consensus 75 n~~~s~--~--~~l~V~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~L~i~~v~~~D~G 150 (204)
T 3sgj_C 75 LSTLSD--P--VQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSG 150 (204)
T ss_dssp TSBCCC--C--EEEEEECSSEEEECSCSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCE
T ss_pred CCcccc--c--EEEEEecCceEecCCceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeecccCCceEEECcCCcccCE
Confidence 86 332 3 6677765443 2222 3232233333 344555 68999
Q ss_pred eeEEEecCCccc
Q psy8425 132 ELVCQCAEGYKG 143 (176)
Q Consensus 132 ~y~C~~~~n~~g 143 (176)
.|.|. |.|..+
T Consensus 151 ~Y~C~-a~n~~~ 161 (204)
T 3sgj_C 151 SYFCR-GLVGSK 161 (204)
T ss_dssp EEEEE-EEETTE
T ss_pred EEEEE-EEeCCC
Confidence 99999 877444
No 69
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.73 E-value=1.6e-17 Score=126.43 Aligned_cols=130 Identities=23% Similarity=0.336 Sum_probs=98.2
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CC
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HK 90 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~ 90 (176)
.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+......... .....|.|.++..+|+|.|+|.|.|. +.
T Consensus 223 ~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 300 (403)
T 3laf_A 223 YFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSL--LGGSNLLISNVTDDDSGTYTCVVTYKNEN 300 (403)
T ss_dssp EEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEE--ETTTEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred eEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEE--CCccEEEEeCCCHHHCEEEEEEEEcCCCc
Confidence 3455667788899999999999999999999999999988754332221 24468999999999999999999999 76
Q ss_pred ceEEEEEEEEEecCCC---------------------CCCCCCCCCeEE--------------ecCCEEEE----eccCC
Q psy8425 91 DVVSAFAEVSINLRPD---------------------NMGGPCPLDSYC--------------LNGGSCTY----YDTVG 131 (176)
Q Consensus 91 ~~~s~~~~l~V~~~p~---------------------~~g~p~p~~~~~--------------~~~~~~~i----~~d~g 131 (176)
...+ +.|.|..+|. +.|.|.|...+. ..++.+.| .+|.|
T Consensus 301 ~~~~--~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G 378 (403)
T 3laf_A 301 ISAS--AELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEG 378 (403)
T ss_dssp EEEE--EEEEEEEEEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEETTTEEEESSCCGGGCE
T ss_pred eEEE--EEEEEECCCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEecCccEEEeccccccCE
Confidence 6666 8888876653 234454422222 33456777 68999
Q ss_pred eeEEEecCCcccCcC
Q psy8425 132 ELVCQCAEGYKGQRC 146 (176)
Q Consensus 132 ~y~C~~~~n~~g~~c 146 (176)
.|.|. |.|..|..-
T Consensus 379 ~Y~C~-a~N~~G~~~ 392 (403)
T 3laf_A 379 FYQCV-AENEAGNAQ 392 (403)
T ss_dssp EEEEE-EEETTEEEE
T ss_pred EEEEE-EEcCCceEE
Confidence 99999 999988653
No 70
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=1.3e-16 Score=101.18 Aligned_cols=104 Identities=22% Similarity=0.293 Sum_probs=82.6
Q ss_pred CCCccccCCCeEEeCCce---eEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCC
Q psy8425 2 SKGLRATIHPIEVSGLRN---VSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDA 78 (176)
Q Consensus 2 s~~l~v~~~p~~~~~~~~---~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~ 78 (176)
|....+..+|.++..+.. +.+.+|+.+.|.|.+. .|.+.+.|+|+|..+....++.+........|.|.++..+|+
T Consensus 2 ~~~~~v~~pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 80 (113)
T 2cpc_A 2 SSGSSGTDVSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDS 80 (113)
T ss_dssp CCCCCCCSCSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTC
T ss_pred CcCcccccCCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccC
Confidence 345567777776555544 6788999999999995 788999999999999877777766545557999999999999
Q ss_pred EEEEEEEEcCCCceEEEEEEEEEecCCCCCCCC
Q psy8425 79 GRYECRGTGVHKDVVSAFAEVSINLRPDNMGGP 111 (176)
Q Consensus 79 G~Y~C~a~n~g~~~~s~~~~l~V~~~p~~~g~p 111 (176)
|.|+|.+.| .... +.|.|..+|...-.|
T Consensus 81 G~Y~C~a~n---~~~~--~~l~V~~~p~~~~~p 108 (113)
T 2cpc_A 81 GEYLCEIDD---ESAS--FTVTVTEPPVRIIYS 108 (113)
T ss_dssp EEEEEESSS---CEEE--EEEEEECCCCCCCCC
T ss_pred EEEEEEEec---CcEE--EEEEEecCCchhccC
Confidence 999999988 3444 889999888754444
No 71
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.73 E-value=1.9e-17 Score=127.84 Aligned_cols=132 Identities=16% Similarity=0.164 Sum_probs=89.8
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CC
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HK 90 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~ 90 (176)
.++..+..+.+.+|+++.|.|.+.|.|.|.+.|++++..+.....+.... ....+|.|.+++.+|+|.|+|.|.|. |.
T Consensus 50 ~~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~~~~-~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~ 128 (423)
T 3qs7_E 50 GTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQN-RGVVSMVILKMTETQAGEYLLFIQSEATN 128 (423)
T ss_dssp ------CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC--CE
T ss_pred cceeccccEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCccceecccc-ceEEEEEEeecCcccCEEEEEEEEcCCCc
Confidence 34445568899999999999999999999999999998776432221110 22357999999999999999999999 76
Q ss_pred ceEEEEEEEEEecCCC--------------------CCCCCCCCCeEEecCCEE----------------E-EeccCCee
Q psy8425 91 DVVSAFAEVSINLRPD--------------------NMGGPCPLDSYCLNGGSC----------------T-YYDTVGEL 133 (176)
Q Consensus 91 ~~~s~~~~l~V~~~p~--------------------~~g~p~p~~~~~~~~~~~----------------~-i~~d~g~y 133 (176)
.... +.|.|..+|. +.|.|.|...|..+++.. . -..|+|.|
T Consensus 129 ~~~~--~~l~V~~~p~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d~G~Y 206 (423)
T 3qs7_E 129 YTIL--FTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDI 206 (423)
T ss_dssp EEEE--EEEEEC-----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCE
T ss_pred EEEE--EEEEEecCccccccCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCccccccccccccccceEEecccCeEE
Confidence 6666 7888874432 457777754554433221 0 04789999
Q ss_pred EEEecCCcccCcCc
Q psy8425 134 VCQCAEGYKGQRCE 147 (176)
Q Consensus 134 ~C~~~~n~~g~~c~ 147 (176)
.|. |.|..|..+.
T Consensus 207 ~C~-A~N~~G~~~~ 219 (423)
T 3qs7_E 207 RCC-ARNELGRECT 219 (423)
T ss_dssp EEE-EECSSCEEEE
T ss_pred EEE-EEcCCCCcce
Confidence 999 9999997664
No 72
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.73 E-value=3.7e-17 Score=105.54 Aligned_cols=83 Identities=12% Similarity=0.211 Sum_probs=70.0
Q ss_pred ecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEec-------ceEEEEEcccCCCCCEEEEEEEEcC-CCceEE
Q psy8425 23 KLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKK-------KRSTLIITRIRSEDAGRYECRGTGV-HKDVVS 94 (176)
Q Consensus 23 ~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~s 94 (176)
..+..+.|.|.+.|.|.|.++|+|||.++..+.+..+.... ..++|.|.++...|+|.|+|.|.|. |....+
T Consensus 13 ~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t 92 (126)
T 1he7_A 13 VEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASAS 92 (126)
T ss_dssp CCCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEE
T ss_pred ccCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEE
Confidence 36788999999999999999999999999887665544322 2478999999999999999999999 887777
Q ss_pred EEEEEEEecCCCC
Q psy8425 95 AFAEVSINLRPDN 107 (176)
Q Consensus 95 ~~~~l~V~~~p~~ 107 (176)
+.|.|...|..
T Consensus 93 --~~l~v~~~P~~ 103 (126)
T 1he7_A 93 --IMAAFMDNPFE 103 (126)
T ss_dssp --EEECCCSCTTS
T ss_pred --EEEEEEcCCCC
Confidence 88888887764
No 73
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.73 E-value=1.5e-17 Score=126.24 Aligned_cols=126 Identities=19% Similarity=0.325 Sum_probs=94.7
Q ss_pred CceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEE--ecceEEEEEcccCCCCCEEEEEEEEcC-CCceE
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQF--KKKRSTLIITRIRSEDAGRYECRGTGV-HKDVV 93 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~ 93 (176)
+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+......++.. ......|.|.++..+|+|.|+|.|.|. |....
T Consensus 219 ~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 298 (395)
T 1bih_A 219 SKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQK 298 (395)
T ss_dssp CCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEE
T ss_pred CCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceE
Confidence 456789999999999999999999999999999887543322221 123348999999999999999999999 66544
Q ss_pred -EEEEEEEEecCCC----------------------CCCCCCCCCeEE------------ecCCEEEE----eccCCeeE
Q psy8425 94 -SAFAEVSINLRPD----------------------NMGGPCPLDSYC------------LNGGSCTY----YDTVGELV 134 (176)
Q Consensus 94 -s~~~~l~V~~~p~----------------------~~g~p~p~~~~~------------~~~~~~~i----~~d~g~y~ 134 (176)
+ +.|.|..+|. +.|.|.|...|. ..++.|.| .+|+|.|.
T Consensus 299 ~~--~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 376 (395)
T 1bih_A 299 HS--LKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVTDSGLVIKGVKNGDKGYYG 376 (395)
T ss_dssp EE--EEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSSSEEEETTEEEESSCCSTTCEEEE
T ss_pred EE--EEEEEEcCCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCCceEEECCEEEEeeCCcccCEEEE
Confidence 5 7888876554 234555533333 33456777 78999999
Q ss_pred EEecCCcccCc
Q psy8425 135 CQCAEGYKGQR 145 (176)
Q Consensus 135 C~~~~n~~g~~ 145 (176)
|. |.|..|..
T Consensus 377 C~-a~N~~G~~ 386 (395)
T 1bih_A 377 CR-ATNEHGDK 386 (395)
T ss_dssp EE-EEETTEEE
T ss_pred EE-EEccCCCc
Confidence 99 99998864
No 74
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=3e-17 Score=102.72 Aligned_cols=92 Identities=20% Similarity=0.496 Sum_probs=77.6
Q ss_pred CCCeEEeCCce---eEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEE
Q psy8425 9 IHPIEVSGLRN---VSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRG 85 (176)
Q Consensus 9 ~~p~~~~~~~~---~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 85 (176)
.+|.++..+.. +.+.+|+++.|.|.+.+.|.+ +.|+|++..+....++.+........|.|.+++.+|+|.|+|.+
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 84 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRT 84 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEEC
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEE
Confidence 46666666665 789999999999999999999 99999999998877777766566789999999999999999999
Q ss_pred EcCCCceEEEEEEEEEecCCC
Q psy8425 86 TGVHKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 86 ~n~g~~~~s~~~~l~V~~~p~ 106 (176)
.|. ... +.|.|.++|.
T Consensus 85 ~n~---~~~--~~l~V~~~P~ 100 (104)
T 2e6p_A 85 EGV---SAF--FGVTVQDPSG 100 (104)
T ss_dssp SSC---CCC--EEEEEECCCC
T ss_pred CCc---eEE--EEEEEcCCCC
Confidence 987 113 7888888775
No 75
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.73 E-value=1.6e-17 Score=115.43 Aligned_cols=131 Identities=15% Similarity=0.107 Sum_probs=88.9
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCC-----CeeEEEe-CCEEeccCcceEEEEe---cceEEEEEcccCCCCCEEEEE
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPL-----PAVSWFK-DNVEITTNKRLKIQFK---KKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~-----p~i~W~~-~g~~l~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C 83 (176)
+..++..+.+.+|+++.|.|.+.+.|. +.+.|+| ++.......+..+... ....+|.|.+++.+|+|.|.|
T Consensus 5 v~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 84 (202)
T 3bp6_B 5 VTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRC 84 (202)
T ss_dssp EECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEE
T ss_pred EecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEE
Confidence 344555678999999999999999886 7899999 5544443344433211 145789999999999999999
Q ss_pred EEEcC-CCceEEEEEEEEEecCCC--------------------CCCCCCCCCeEEe------------cCCEEE---E-
Q psy8425 84 RGTGV-HKDVVSAFAEVSINLRPD--------------------NMGGPCPLDSYCL------------NGGSCT---Y- 126 (176)
Q Consensus 84 ~a~n~-g~~~~s~~~~l~V~~~p~--------------------~~g~p~p~~~~~~------------~~~~~~---i- 126 (176)
.+.|. +..... +.|.|..++. +.|.|.|...+.. ..|... +
T Consensus 85 ~~~~~~~~~~~~--~~l~V~~~~~~p~~~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~~~~~~~~~~~~~~i~ 162 (202)
T 3bp6_B 85 LVICGAAWDYKY--LTVKVKASYMRIDTRILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTSHIRTPEGLYQVTSVL 162 (202)
T ss_dssp EEEETTEEEEEE--EEEEEEBCCCCEEEEEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEEEEECTTSCEEEEEEE
T ss_pred EEEeCCCcceEE--EEEEecCCCCcccEEEEecCCCCeEEEEEEccccCCceEEEEeCCCCccCceeeCCCCCEEEEEEE
Confidence 99998 555555 7888876543 3345554211111 122211 1
Q ss_pred ---eccCCeeEEEecCCcccCcC
Q psy8425 127 ---YDTVGELVCQCAEGYKGQRC 146 (176)
Q Consensus 127 ---~~d~g~y~C~~~~n~~g~~c 146 (176)
.+|.|.|.|. |.|..|..-
T Consensus 163 ~v~~~d~G~Y~C~-a~N~~g~~~ 184 (202)
T 3bp6_B 163 RLKPQPSRNFSCM-FWNAHMKEL 184 (202)
T ss_dssp EECCCTTCCEEEE-EEETTTTEE
T ss_pred EEEcCCCCEEEEE-EEcCCcccc
Confidence 5789999999 999988654
No 76
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.73 E-value=3.8e-17 Score=128.73 Aligned_cols=134 Identities=12% Similarity=0.157 Sum_probs=100.3
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCe-eEEEeCCEEe--ccCcceEEE---EecceEEEEEcccCCCCCEEEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPA-VSWFKDNVEI--TTNKRLKIQ---FKKKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~-i~W~~~g~~l--~~~~~~~~~---~~~~~~~L~i~~v~~~d~G~Y~ 82 (176)
.+|.+...+....+.+|+.+.|.|.+.+.|.|. +.|++++..+ ....+..+. .......|.|.++..+|+|.|+
T Consensus 210 ~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 289 (524)
T 2ec8_A 210 AVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFM 289 (524)
T ss_dssp SCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEE
T ss_pred CCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEE
Confidence 688888888888999999999999999999886 9999999873 332222221 1134578999999999999999
Q ss_pred EEEEcC-CCceEEEEEEEEEecCCC------------------------CCCCCCCC-CeEEecC---------------
Q psy8425 83 CRGTGV-HKDVVSAFAEVSINLRPD------------------------NMGGPCPL-DSYCLNG--------------- 121 (176)
Q Consensus 83 C~a~n~-g~~~~s~~~~l~V~~~p~------------------------~~g~p~p~-~~~~~~~--------------- 121 (176)
|.|.|. |....+ +.|.|..+|. +.|.|.|. ..|..++
T Consensus 290 C~a~n~~g~~~~~--~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~ 367 (524)
T 2ec8_A 290 CYANNTFGSANVT--TTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSEN 367 (524)
T ss_dssp EEEECSSCEEEEE--EEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCS
T ss_pred EEEEecCCceEEE--EEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEcc
Confidence 999999 766666 8888876554 33445554 2332211
Q ss_pred -------CEEEE----eccCCeeEEEecCCcccCc
Q psy8425 122 -------GSCTY----YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 122 -------~~~~i----~~d~g~y~C~~~~n~~g~~ 145 (176)
..|.| .+|.|.|+|. |.|..|..
T Consensus 368 ~~~~~~~~~L~i~~v~~~d~G~Y~C~-a~N~~g~~ 401 (524)
T 2ec8_A 368 ESNIRYVSELHLTRLKGTEGGTYTFL-VSNSDVNA 401 (524)
T ss_dssp SSCCEEEEEEEECSCCGGGCEEEEEE-EECSSCEE
T ss_pred CCCceeEEEEEEeecCcccCeEEEEE-EEecCceE
Confidence 25666 6899999999 99998873
No 77
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=2.1e-17 Score=105.85 Aligned_cols=95 Identities=26% Similarity=0.425 Sum_probs=79.6
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEecc-CcceEEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITT-NKRLKIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~-~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
..+|.|...+.++.+.+|+++.|.|.+.|.|.|.+.|+|+|..+.. ..++.+. .+++|.|.+++.+|+|.|+|.|.
T Consensus 6 ~~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~---~~~~L~i~~v~~~D~G~Y~C~a~ 82 (118)
T 2eo9_A 6 SGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQL---ENGVLQIRYAKLGDTGRYTCIAS 82 (118)
T ss_dssp CCSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEE---ETTEEEEESCCGGGCCCEEEEEE
T ss_pred CCCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEc---cCCEEEEccCCcCCCEEEEEEEE
Confidence 4688888888899999999999999999999999999999988864 3444432 24589999999999999999999
Q ss_pred cC-CCceEEEEEEEEEecCCCC
Q psy8425 87 GV-HKDVVSAFAEVSINLRPDN 107 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~~~p~~ 107 (176)
|. |....+ +.|.|..++..
T Consensus 83 n~~g~~~~~--~~l~V~~~~~p 102 (118)
T 2eo9_A 83 TPSGEATWS--AYIEVQEFGVP 102 (118)
T ss_dssp CSSCEEEEE--CCEEEECCSCC
T ss_pred cCCCcEEEE--EEEEEEeCCCC
Confidence 99 776666 88888876653
No 78
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=1e-16 Score=101.69 Aligned_cols=96 Identities=20% Similarity=0.229 Sum_probs=78.6
Q ss_pred ccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCc----------ceEEEEecceEEEEEcccC
Q psy8425 5 LRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNK----------RLKIQFKKKRSTLIITRIR 74 (176)
Q Consensus 5 l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~----------~~~~~~~~~~~~L~i~~v~ 74 (176)
+....+|.|...++++.+.+|+++.|.|.+.+ .|.+.|+|||.+|..+. ++.+.......+|.|.+++
T Consensus 3 v~~~p~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~ 80 (112)
T 2e6q_A 3 SGSSGTARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVK 80 (112)
T ss_dssp CSCCSCCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCC
T ss_pred ccccCCcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCC
Confidence 34445678999999999999999999999997 77899999999998876 6666544456789999999
Q ss_pred CCCCEEEEEEEEcCCCceEEEEEEEEEecCCC
Q psy8425 75 SEDAGRYECRGTGVHKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~g~~~~s~~~~l~V~~~p~ 106 (176)
.+|+|.|+|...+. ...+ +.|.|..+|.
T Consensus 81 ~~D~G~Y~~~~~~~--~~ss--A~L~V~~~p~ 108 (112)
T 2e6q_A 81 HQDSGALVGFSCPG--VQDS--AALTIQESSG 108 (112)
T ss_dssp STTCSEEEEEEETT--EEEE--EEEEEECSSC
T ss_pred HHHCccEEEEEECC--eeEE--EEEEEeCCCc
Confidence 99999998755443 3345 8999998775
No 79
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.73 E-value=7.4e-18 Score=116.93 Aligned_cols=93 Identities=13% Similarity=0.091 Sum_probs=68.7
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
..+|.|...+.. .+.+|++++|.|.+.+.|. .+.|+|+|..+..... ..........|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (196)
T 2d3v_A 3 LSKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQ-NPLEPKNKARFSIPSMTEHHAGRYRCYYYS 79 (196)
T ss_dssp CCBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEE-CCCSSTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccc-cccCCccccEEEeccCChhHCeEEEEEEeC
Confidence 467888776664 7899999999999988765 9999999987653211 001114567899999999999999999998
Q ss_pred C-CCceEEEEEEEEEec
Q psy8425 88 V-HKDVVSAFAEVSINL 103 (176)
Q Consensus 88 ~-g~~~~s~~~~l~V~~ 103 (176)
. +....+..+.|.|..
T Consensus 80 ~~g~~~~s~~~~l~V~~ 96 (196)
T 2d3v_A 80 PAGWSEPSDPLELVVTG 96 (196)
T ss_dssp TTEECBCCCCEEEEEEC
T ss_pred CCCcCCcCccEEEEecC
Confidence 7 533322226777765
No 80
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.72 E-value=4.8e-18 Score=133.91 Aligned_cols=141 Identities=18% Similarity=0.225 Sum_probs=99.5
Q ss_pred CccccCCCeEEeCC---ceeEEecCCcEEEEEEEeecCCCe-eEEEeCCEEeccCcceEEEEec-----ceEEEEEcccC
Q psy8425 4 GLRATIHPIEVSGL---RNVSVKLRQSLRLVCRCKGNPLPA-VSWFKDNVEITTNKRLKIQFKK-----KRSTLIITRIR 74 (176)
Q Consensus 4 ~l~v~~~p~~~~~~---~~~~v~~G~~~~l~C~~~g~p~p~-i~W~~~g~~l~~~~~~~~~~~~-----~~~~L~i~~v~ 74 (176)
.|.|..+|.+...+ ....+.+|+.+.|.|.+.|.|.|. +.|+++|..+............ ...+|.|.++.
T Consensus 304 ~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 383 (524)
T 2ec8_A 304 TLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLK 383 (524)
T ss_dssp EEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCC
T ss_pred EEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecC
Confidence 46677788876543 368899999999999999999998 9999999988765421111111 34689999999
Q ss_pred CCCCEEEEEEEEcC-CCceEEEEEEEEEecCCC---------------CCCCCCCCCeEE--------------------
Q psy8425 75 SEDAGRYECRGTGV-HKDVVSAFAEVSINLRPD---------------NMGGPCPLDSYC-------------------- 118 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p~---------------~~g~p~p~~~~~-------------------- 118 (176)
.+|+|.|+|.|.|. |....+ +.|.|..+|. +.|.|.|...|.
T Consensus 384 ~~d~G~Y~C~a~N~~g~~~~~--~~l~V~~~P~i~~~~~~~~g~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~ 461 (524)
T 2ec8_A 384 GTEGGTYTFLVSNSDVNAAIA--FNVYVNTKPEILTYDRLVNGMLQCVAAGFPEPTIDWYFCPGTEQRCSASVLPVDVQT 461 (524)
T ss_dssp GGGCEEEEEEEECSSCEEEEE--EEEEECEEEEEEEEECCSSSCEEEEEEEESCCEEECCCC----------CCCCCCCC
T ss_pred cccCeEEEEEEEecCceEEEE--EEEEEecCCeEeecccCcCcEEEEEEEeecCCEEEEEECCCcccccccccCCCCcee
Confidence 99999999999999 776666 8888887765 235565521111
Q ss_pred -----ecCCEEEE--------eccCCeeEEEecCCcccCcCc
Q psy8425 119 -----LNGGSCTY--------YDTVGELVCQCAEGYKGQRCE 147 (176)
Q Consensus 119 -----~~~~~~~i--------~~d~g~y~C~~~~n~~g~~c~ 147 (176)
...|.+.+ .+|.|.|.|. |.|..|..-.
T Consensus 462 ~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~-a~N~~G~~~~ 502 (524)
T 2ec8_A 462 LNSSGPPFGKLVVQSSIDSSAFKHNGTVECK-AYNDVGKTSA 502 (524)
T ss_dssp CCC-CCSSSCEEEEEEECCCSCCC-----CE-EECSSCEEEC
T ss_pred eeeccCCCCcceEEEEEEEEEccCCEEEEEE-EEcCCCceEE
Confidence 22344432 4899999999 9999996543
No 81
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=7e-18 Score=105.19 Aligned_cols=91 Identities=24% Similarity=0.390 Sum_probs=76.8
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCc----ceEEEEecceEEEEEcccCCCCCEEEEEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNK----RLKIQFKKKRSTLIITRIRSEDAGRYECR 84 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~----~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 84 (176)
.||.|...+.++.+.+|+.+.|.|.+.+.| +.+.|+|+|..+.... ++.+........|.|.++..+|+|.|+|.
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 85 (101)
T 2edk_A 7 GPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVI 85 (101)
T ss_dssp CCCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEE
T ss_pred CCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEE
Confidence 467888888899999999999999999988 9999999999988765 55666555667899999999999999999
Q ss_pred EEcCCCceEEEEEEEEEecCC
Q psy8425 85 GTGVHKDVVSAFAEVSINLRP 105 (176)
Q Consensus 85 a~n~g~~~~s~~~~l~V~~~p 105 (176)
|.|. ..+ +.|.|..+|
T Consensus 86 a~n~---~~~--~~l~V~~~P 101 (101)
T 2edk_A 86 TNGG---QCE--AELIVEEKQ 101 (101)
T ss_dssp CSSC---EEC--CBEEEECCC
T ss_pred EcCC---cEE--EEEEEeCCC
Confidence 9873 334 778887765
No 82
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=1.5e-17 Score=104.35 Aligned_cols=96 Identities=15% Similarity=0.225 Sum_probs=80.3
Q ss_pred cccC-CCeEEeCCceeEEecCCcEEEEEEEeecCCC-eeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEE
Q psy8425 6 RATI-HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLP-AVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 6 ~v~~-~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 83 (176)
.|.. +|.|...+.++.+.+|+++.|.|.+.+.|.+ .+.|+|+|..+..+.++.+.......+|.|.+++.+|+|.|+|
T Consensus 3 ~V~~~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 82 (104)
T 2eny_A 3 SGSSGHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVF 82 (104)
T ss_dssp CCCCCCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEE
T ss_pred ccccCCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEE
Confidence 3444 4567888899999999999999999988754 7999999999988888887766667799999999999999999
Q ss_pred EEEcCCCceEEEEEEEEEecCCC
Q psy8425 84 RGTGVHKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 84 ~a~n~g~~~~s~~~~l~V~~~p~ 106 (176)
.+.|. ..+ +.|.|..+|.
T Consensus 83 ~a~~~---~~~--a~L~V~~~p~ 100 (104)
T 2eny_A 83 SVRGL---TSK--ASLIVRERSG 100 (104)
T ss_dssp EETTE---EEE--ECEEEECCCS
T ss_pred EECCe---eEE--EEEEEeCCCc
Confidence 88653 445 8899998774
No 83
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.72 E-value=1.6e-17 Score=115.59 Aligned_cols=132 Identities=19% Similarity=0.303 Sum_probs=97.0
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEec------------cCcceEEEEecceEEEEEcccCCC
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEIT------------TNKRLKIQFKKKRSTLIITRIRSE 76 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~------------~~~~~~~~~~~~~~~L~i~~v~~~ 76 (176)
.++.+...+..+.+.+|+.+.|.|.+.+.|.+.+.|++++..+. ...++.+ ....|.|.+++.+
T Consensus 3 ~~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~----~~~~L~i~~~~~~ 78 (209)
T 1nbq_A 3 GSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTF----LPTGITFKSVTRE 78 (209)
T ss_dssp CCCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEE----ETTEEECSCCCTT
T ss_pred ceEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEe----eccEEEEeeCCHH
Confidence 45667777888899999999999999999999999999765421 1223222 1268999999999
Q ss_pred CCEEEEEEEEcC-CCceEEEEEEEEEecCCC---------------------C-CCCCCCCCeEEe--------------
Q psy8425 77 DAGRYECRGTGV-HKDVVSAFAEVSINLRPD---------------------N-MGGPCPLDSYCL-------------- 119 (176)
Q Consensus 77 d~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p~---------------------~-~g~p~p~~~~~~-------------- 119 (176)
|+|.|+|.+.|. +....+..+.|.|..+|. + .|.|.|...|..
T Consensus 79 d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~ 158 (209)
T 1nbq_A 79 DTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRA 158 (209)
T ss_dssp SCSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSS
T ss_pred HCcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCcccccee
Confidence 999999999998 544433337788877665 2 455655222222
Q ss_pred ----------cCCEEEE----eccCCeeEEEecCCcccCc
Q psy8425 120 ----------NGGSCTY----YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 120 ----------~~~~~~i----~~d~g~y~C~~~~n~~g~~ 145 (176)
.++.|.| .+|.|.|.|. |.|..|..
T Consensus 159 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~-a~n~~g~~ 197 (209)
T 1nbq_A 159 FSNSSYVLNPTTGELVFDPLSASDTGEYSCE-ARNGYGTP 197 (209)
T ss_dssp CTTCCCCCCTTTCCEEESSCCGGGCCCEEEE-EECSSSCC
T ss_pred eeccceEEcCCcceEEEEeccccCCeEEEEE-EeCCcCcc
Confidence 2356777 6899999999 99999976
No 84
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.72 E-value=2e-17 Score=125.80 Aligned_cols=123 Identities=23% Similarity=0.415 Sum_probs=95.2
Q ss_pred ceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CCceEEEE
Q psy8425 18 RNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HKDVVSAF 96 (176)
Q Consensus 18 ~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~s~~ 96 (176)
....+.+|+.+.|.|.+.|.|.|.+.|+++|..+..... . ....+..|.|.++..+|+|.|+|.|.|. |.....
T Consensus 230 ~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~-~--~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-- 304 (404)
T 3p3y_A 230 SSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKA-K--FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT-- 304 (404)
T ss_dssp EEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTE-E--EEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEE--
T ss_pred CCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCcc-c--ccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEE--
Confidence 346788999999999999999999999999998876433 2 2245678999999999999999999999 776666
Q ss_pred EEEEEecCCC---------------------CCCCCCCCCeE----------------EecCCEEEE----eccCCeeEE
Q psy8425 97 AEVSINLRPD---------------------NMGGPCPLDSY----------------CLNGGSCTY----YDTVGELVC 135 (176)
Q Consensus 97 ~~l~V~~~p~---------------------~~g~p~p~~~~----------------~~~~~~~~i----~~d~g~y~C 135 (176)
+.|.|..+|. +.|.|.|...| ...++.|.| .+|+|.|.|
T Consensus 305 ~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 384 (404)
T 3p3y_A 305 ISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQC 384 (404)
T ss_dssp EEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEE
T ss_pred EEEEEeCCCeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEE
Confidence 8888877653 33455542222 234566777 789999999
Q ss_pred EecCCcccCcC
Q psy8425 136 QCAEGYKGQRC 146 (176)
Q Consensus 136 ~~~~n~~g~~c 146 (176)
. |.|..|..-
T Consensus 385 ~-a~N~~G~~~ 394 (404)
T 3p3y_A 385 N-TSNEHGYLL 394 (404)
T ss_dssp E-EEETTEEEE
T ss_pred E-EEeCCCcEE
Confidence 9 999988653
No 85
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.72 E-value=4.8e-17 Score=110.89 Aligned_cols=122 Identities=16% Similarity=0.252 Sum_probs=89.7
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCe-eEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPA-VSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~-i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
..+|.+...+....+.+|+++.|.|.+.+.|.+. +.|+|++..+.. ....|.|.+++.+|+|.|+|.+.
T Consensus 5 ~~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~----------~~~~L~i~~~~~~d~G~Y~C~~~ 74 (175)
T 1fnl_A 5 LPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS----------QASSYFIDAATVNDSGEYRCQTN 74 (175)
T ss_dssp CCCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES----------SCSEEEESSCCGGGCEEEEEECS
T ss_pred CCCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC----------CceEEEEeCCCcccCEEEEEEee
Confidence 4577888778888899999999999999988776 789999987754 34589999999999999999999
Q ss_pred cC-CCceEEEEEEEEEecCCC--------------------CCCCCCC-CCeEEec---------CCEEEE----eccCC
Q psy8425 87 GV-HKDVVSAFAEVSINLRPD--------------------NMGGPCP-LDSYCLN---------GGSCTY----YDTVG 131 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~~~p~--------------------~~g~p~p-~~~~~~~---------~~~~~i----~~d~g 131 (176)
|. +.. . +.|.|..++. +.|.|.+ ...+..+ ++.|.| .+|.|
T Consensus 75 n~~~s~--~--~~l~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~~~~~~L~i~~v~~~d~G 150 (175)
T 1fnl_A 75 LSTLSD--P--VQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIPKATLKDSG 150 (175)
T ss_dssp SSCCCC--C--EEEEEECSSEEEECSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCE
T ss_pred CCcccc--c--EEEEEeCCCceeeCCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCCCCCCEEEEcccChhhCe
Confidence 86 432 3 5566654321 3344432 2233333 344555 68999
Q ss_pred eeEEEecCCcccC
Q psy8425 132 ELVCQCAEGYKGQ 144 (176)
Q Consensus 132 ~y~C~~~~n~~g~ 144 (176)
.|.|. |.|..|.
T Consensus 151 ~Y~C~-a~n~~~~ 162 (175)
T 1fnl_A 151 SYFCR-GLVGSKN 162 (175)
T ss_dssp EEEEE-EEETTEE
T ss_pred EEEEE-EEcCCCC
Confidence 99999 8776554
No 86
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.72 E-value=2.3e-17 Score=101.71 Aligned_cols=86 Identities=19% Similarity=0.345 Sum_probs=72.5
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
.+|.+...+..+.+.+|+++.|.|.+.|.| |.+.|+|+|..+....++.+ ....|.|.+++.+|+|.|.|.|.|.
T Consensus 8 ~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~----~~~~L~i~~~~~~D~G~Y~C~a~n~ 82 (95)
T 2ckn_A 8 QPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRI----TGEEVEVRDSIPADSGLYACVTSSP 82 (95)
T ss_dssp CSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEE----CSSEEEESSCCGGGSEEEEEEEEET
T ss_pred CCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEE----eCCEEEECCCChHHCEEEEEEeccC
Confidence 467777778889999999999999999988 89999999998877666544 2568999999999999999999999
Q ss_pred -CCceEEEEEEEEE
Q psy8425 89 -HKDVVSAFAEVSI 101 (176)
Q Consensus 89 -g~~~~s~~~~l~V 101 (176)
|....+ +.|.|
T Consensus 83 ~g~~~~~--~~l~V 94 (95)
T 2ckn_A 83 SGSDTTY--FSVNV 94 (95)
T ss_dssp TEEEEEE--EEEEE
T ss_pred CCcEEEE--EEEEE
Confidence 766555 66665
No 87
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.72 E-value=1.7e-17 Score=122.37 Aligned_cols=92 Identities=24% Similarity=0.296 Sum_probs=71.8
Q ss_pred cccCCCeEEeCCceeEEecCCcEEEEEEEeec-CCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEE
Q psy8425 6 RATIHPIEVSGLRNVSVKLRQSLRLVCRCKGN-PLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECR 84 (176)
Q Consensus 6 ~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 84 (176)
....+|.|..+. +..+.+|+.+.|.|.+.+. |.+.+.|+|+|..+....++.+. .....|.|.+++.+|+|.|+|.
T Consensus 3 ~~~~~P~~~~~~-~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~ 79 (317)
T 2y25_A 3 DPFTGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVI 79 (317)
T ss_dssp CSSSCCEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-------CCEEEEETTCCSTTCSCEEEE
T ss_pred CccCCCcEeeee-eEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEE--CCeEEEEEccCCcccCeEEEEE
Confidence 456788888554 5889999999999999887 77899999999999876655443 4557999999999999999999
Q ss_pred EEcC-CCceEEEEEEEEEe
Q psy8425 85 GTGV-HKDVVSAFAEVSIN 102 (176)
Q Consensus 85 a~n~-g~~~~s~~~~l~V~ 102 (176)
+.|. +..... +.|.|.
T Consensus 80 ~~n~~g~~~~~--~~l~v~ 96 (317)
T 2y25_A 80 LKDDRGKDKSR--LKLVDE 96 (317)
T ss_dssp EESSSCEEEEE--ECCSTH
T ss_pred EECCCCcEEEE--EEEEEe
Confidence 9998 655444 555444
No 88
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.72 E-value=5.1e-17 Score=104.02 Aligned_cols=98 Identities=16% Similarity=0.259 Sum_probs=77.0
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEec----ceEEEEEcccCCCCCE
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKK----KRSTLIITRIRSEDAG 79 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~----~~~~L~i~~v~~~d~G 79 (176)
.|.|..+|.+...... . ..+...|.|.+.|.|.|.+.|+|+|..+....+..+.... ..+.|.|.++..+|+|
T Consensus 2 ~L~V~~pP~i~~~~~~-~--~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 78 (118)
T 1wwc_A 2 ALTVYYPPRVVSLEEP-E--LRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNG 78 (118)
T ss_dssp --CCCCCCCCCCCCCC-C--CCCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCE
T ss_pred EEEEecCCceeccCCC-e--eccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCE
Confidence 4788889987655322 2 2366789999999999999999999999887665554322 4568999999999999
Q ss_pred EEEEEEEcC-CCceEEEEEEEEEecCCC
Q psy8425 80 RYECRGTGV-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 80 ~Y~C~a~n~-g~~~~s~~~~l~V~~~p~ 106 (176)
.|+|.|.|. |....+ +.|.|..+|.
T Consensus 79 ~Y~C~a~N~~G~~~~~--~~l~v~~~P~ 104 (118)
T 1wwc_A 79 NYTLIAKNPLGTANQT--INGHFLKEPF 104 (118)
T ss_dssp EEEEEEEETTEEEEEE--EEECCSCCCC
T ss_pred EEEEEEECCCCeEeeE--EEEEEccCCC
Confidence 999999999 877777 8888887775
No 89
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.72 E-value=3.1e-16 Score=114.43 Aligned_cols=132 Identities=19% Similarity=0.256 Sum_probs=96.2
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecC-CCeeEEEe-CCEEeccC-cceEEEE-ecceEEEEEcccCCCCCEEEEEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNP-LPAVSWFK-DNVEITTN-KRLKIQF-KKKRSTLIITRIRSEDAGRYECRG 85 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p-~p~i~W~~-~g~~l~~~-~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a 85 (176)
++.+...+.+..+.+|+.+.|.|.+.+.| .+.+.|++ +|..+... .++.+.. ......|.|.+++.+|+|.|+|.+
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 81 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEE
Confidence 56777788888999999999999999987 68999999 78777643 3333322 246689999999999999999999
Q ss_pred EcC-CCceEEEEEEEEEecCCC---------------------CCCCCCCCCeE----------------EecCCEEEE-
Q psy8425 86 TGV-HKDVVSAFAEVSINLRPD---------------------NMGGPCPLDSY----------------CLNGGSCTY- 126 (176)
Q Consensus 86 ~n~-g~~~~s~~~~l~V~~~p~---------------------~~g~p~p~~~~----------------~~~~~~~~i- 126 (176)
.|. +. ..+..+.|.|..+|. ..|.|.|...+ ...++.|.|
T Consensus 82 ~n~~g~-~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~ 160 (291)
T 1qz1_A 82 TAEDGT-QSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIR 160 (291)
T ss_dssp ECTTSC-EEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEET
T ss_pred EcCCCC-eeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEEc
Confidence 998 43 333237777765543 23455442122 234556777
Q ss_pred ---eccCCeeEEEecCCccc
Q psy8425 127 ---YDTVGELVCQCAEGYKG 143 (176)
Q Consensus 127 ---~~d~g~y~C~~~~n~~g 143 (176)
.+|.|.|.|. +.|..+
T Consensus 161 ~~~~~d~G~Y~C~-a~n~~~ 179 (291)
T 1qz1_A 161 GIKKTDEGTYRCE-GRILAR 179 (291)
T ss_dssp TCCGGGCEEEEEE-EEEGGG
T ss_pred cCccccCeEEEEE-EEecCC
Confidence 6899999999 777654
No 90
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.71 E-value=3.2e-17 Score=113.65 Aligned_cols=93 Identities=14% Similarity=0.099 Sum_probs=68.7
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
..+|.+...+.. .+.+|++++|.|.+.+ +.+.+.|+|+|..+...... .........|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (196)
T 3p2t_A 3 LPKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQN-PLEPKNKARFSIPSMTEDYAGRYRCYYRS 79 (196)
T ss_dssp BCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEEC-CCSSSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccc-cccCCceEEEEeccCCcccCceEEEEEeC
Confidence 357788777776 7899999999999988 77899999999876542110 00113567899999999999999999999
Q ss_pred C-CCceEEEEEEEEEec
Q psy8425 88 V-HKDVVSAFAEVSINL 103 (176)
Q Consensus 88 ~-g~~~~s~~~~l~V~~ 103 (176)
. +....+..+.|.|..
T Consensus 80 ~~g~~~~s~~~~l~V~~ 96 (196)
T 3p2t_A 80 PVGWSQPSDPLELVMTG 96 (196)
T ss_dssp TTEEBCCCCCEEEEEEC
T ss_pred CCcccCCCccEEEEecC
Confidence 8 522223226777754
No 91
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.71 E-value=1.6e-17 Score=122.26 Aligned_cols=133 Identities=23% Similarity=0.403 Sum_probs=93.8
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcc-eEEEEecceEEEEEcccCCCCCEEEEEEEEcC-
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKR-LKIQFKKKRSTLIITRIRSEDAGRYECRGTGV- 88 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~- 88 (176)
|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+..... .++.. ...+.|.|.+++.+|+|.|+|.|.|.
T Consensus 109 p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 187 (304)
T 2yd9_A 109 PNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQ-LRSGALQIESSEETDQGKYECVATNSA 187 (304)
T ss_dssp CEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEE-CTTSCEEECSCCGGGCEEEEEEEEETT
T ss_pred CeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEe-CCCeEEEEccCCcccCEEEEEEEEeCC
Confidence 7777778888899999999999999999999999999998875321 12222 34458999999999999999999998
Q ss_pred CCceEEEEEEEEEe---cCCC---------------------CCCCCCCCCeEEecC-----------CE--EEE--ecc
Q psy8425 89 HKDVVSAFAEVSIN---LRPD---------------------NMGGPCPLDSYCLNG-----------GS--CTY--YDT 129 (176)
Q Consensus 89 g~~~~s~~~~l~V~---~~p~---------------------~~g~p~p~~~~~~~~-----------~~--~~i--~~d 129 (176)
|..... .+.|.|. .+|. +.|.|.|...|..++ +. +.+ .+|
T Consensus 188 g~~~~~-~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~L~i~~~~d 266 (304)
T 2yd9_A 188 GVRYSS-PANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMPVGRNVLELTDVKD 266 (304)
T ss_dssp EEEECC-CEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSCCBSEEEEEECSCCS
T ss_pred CCEEec-cEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCcccccCCcEEEEEccccc
Confidence 543311 1333432 1221 334555533333332 22 333 689
Q ss_pred CCeeEEEecCCcccCcC
Q psy8425 130 VGELVCQCAEGYKGQRC 146 (176)
Q Consensus 130 ~g~y~C~~~~n~~g~~c 146 (176)
+|.|+|. |.|..|..-
T Consensus 267 ~G~Y~C~-a~N~~G~~~ 282 (304)
T 2yd9_A 267 SANYTCV-AMSSLGVIE 282 (304)
T ss_dssp CEEEEEE-EEETTEEEE
T ss_pred CEEEEEE-EEeCCCcEE
Confidence 9999999 999999753
No 92
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.71 E-value=3.3e-17 Score=129.76 Aligned_cols=136 Identities=18% Similarity=0.216 Sum_probs=97.0
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEe-ecCCCeeEEEeCCEEeccCcceEEEE------ecceEEEEEcccCCC
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCK-GNPLPAVSWFKDNVEITTNKRLKIQF------KKKRSTLIITRIRSE 76 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~-g~p~p~i~W~~~g~~l~~~~~~~~~~------~~~~~~L~i~~v~~~ 76 (176)
.|.|..+|.+ ++....+.+|+.+.|.|.+. |.|.|.+.|++++..+.....+.... .....+|.|.+++.+
T Consensus 223 ~l~V~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 300 (527)
T 3qs9_E 223 TIDLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARN 300 (527)
T ss_dssp EEESSSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGG
T ss_pred EEEEeccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcc
Confidence 3556666665 56678899999999999996 89999999999998876643332211 023457999999999
Q ss_pred CCEEEEEEEEcCCCceEEEEEEEEEecCCC-----------------------CCCCCCCCCeEEe-------------c
Q psy8425 77 DAGRYECRGTGVHKDVVSAFAEVSINLRPD-----------------------NMGGPCPLDSYCL-------------N 120 (176)
Q Consensus 77 d~G~Y~C~a~n~g~~~~s~~~~l~V~~~p~-----------------------~~g~p~p~~~~~~-------------~ 120 (176)
|+|.|+|.|.|. ...+ +.|.|..+|. +.|.|.|...|.. .
T Consensus 301 DsG~Y~C~a~N~--~~~~--~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~ 376 (527)
T 3qs9_E 301 DTGYYTCSSSKH--PSQS--ALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDN 376 (527)
T ss_dssp GCEEEEEEETTE--EEEE--EEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSS
T ss_pred cCeEEEEEEEeC--CCce--EEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccccC
Confidence 999999999997 3444 7788876553 2344555323332 2
Q ss_pred CCEEEE----eccCCeeEEEecCCcccCcC
Q psy8425 121 GGSCTY----YDTVGELVCQCAEGYKGQRC 146 (176)
Q Consensus 121 ~~~~~i----~~d~g~y~C~~~~n~~g~~c 146 (176)
++.|.| .+|+|.|+|. |.|..|..-
T Consensus 377 ~~~L~I~~v~~~D~G~YtC~-A~N~~g~~~ 405 (527)
T 3qs9_E 377 GYSISKFCNHKHQPGEYIFH-AENDDAQFT 405 (527)
T ss_dssp SSEEEEECCCTTCCSCEEEE-EEETTEEEE
T ss_pred CcEEEEecCCcccCEEEEEE-EEeCCCcEE
Confidence 346666 6899999999 999888543
No 93
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.71 E-value=6.3e-17 Score=112.80 Aligned_cols=129 Identities=12% Similarity=0.225 Sum_probs=93.4
Q ss_pred EeCCceeEEecCCcEEEEEEEeecC----CCeeEEEe----------------CCEEecc-----CcceEEEE---ecce
Q psy8425 14 VSGLRNVSVKLRQSLRLVCRCKGNP----LPAVSWFK----------------DNVEITT-----NKRLKIQF---KKKR 65 (176)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~~~g~p----~p~i~W~~----------------~g~~l~~-----~~~~~~~~---~~~~ 65 (176)
..++..+.+.+|+++.|.|.+.+.| .+.+.|++ ++..+.. ..+..+.. ....
T Consensus 4 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 83 (214)
T 3jz7_A 4 TTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGD 83 (214)
T ss_dssp --CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTB
T ss_pred ecCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCc
Confidence 3445677899999999999998877 46899998 4444431 22322210 1245
Q ss_pred EEEEEcccCCCCCEEEEEEEEcC-CCceEEEEEEEEEecCCC---------------------C-CCCCCCCCeEEe---
Q psy8425 66 STLIITRIRSEDAGRYECRGTGV-HKDVVSAFAEVSINLRPD---------------------N-MGGPCPLDSYCL--- 119 (176)
Q Consensus 66 ~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p~---------------------~-~g~p~p~~~~~~--- 119 (176)
.+|.|.+++.+|+|.|.|.+.|. +..... +.|.|..+|. + .|.|.|...|..
T Consensus 84 ~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~--~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~ 161 (214)
T 3jz7_A 84 ASINVTNLQLSDIGTYQCKVKKAPGVANKK--FLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSD 161 (214)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTEEEEEE--EEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECST
T ss_pred ccEEEccCChhhCeEEEEEEEeCCCccccE--EEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCC
Confidence 78999999999999999999998 655555 8899987765 3 567766434433
Q ss_pred ------------cCCEEEE----eccCCeeEEEecCCcccCc
Q psy8425 120 ------------NGGSCTY----YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 120 ------------~~~~~~i----~~d~g~y~C~~~~n~~g~~ 145 (176)
.++.|.| .+|+|.|.|. |.|..|..
T Consensus 162 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~-a~N~~g~~ 202 (214)
T 3jz7_A 162 SQTMPTPWLAEMTSPVISVKNASSEYSGTYSCT-VQNRVGSD 202 (214)
T ss_dssp TCCCCGGGGGGTTSSEEEECSCCGGGCEEEEEE-EECSSCEE
T ss_pred CCccCccceeccCCCEEEEecCCHHHCEEEEEE-EEcCCCcE
Confidence 3567777 6899999999 99998865
No 94
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.71 E-value=4.5e-17 Score=107.37 Aligned_cols=84 Identities=26% Similarity=0.382 Sum_probs=70.0
Q ss_pred CceeEEecCCcEEEEEEEeecCCCeeEEEeCC----------------------------EEe-ccCcceEEEEecceEE
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN----------------------------VEI-TTNKRLKIQFKKKRST 67 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g----------------------------~~l-~~~~~~~~~~~~~~~~ 67 (176)
+.++.+.+|+++.|.|.+.|.|.|.+.|+|++ ..+ ....++.+........
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~ 104 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSI 104 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEE
Confidence 57889999999999999999999999999998 444 2345566655455678
Q ss_pred EEEcccCCCCCEEEEEEEEcC-CCceEEEEEEEEEe
Q psy8425 68 LIITRIRSEDAGRYECRGTGV-HKDVVSAFAEVSIN 102 (176)
Q Consensus 68 L~i~~v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~ 102 (176)
|.|.++..+|+|.|+|.|.|. |....+ +.|.|.
T Consensus 105 L~I~~v~~~DsG~Y~C~A~N~~G~~~~~--~~L~V~ 138 (139)
T 1gxe_A 105 FTVEGAEKEDEGVYTVTVKNPVGEDQVN--LTVKVI 138 (139)
T ss_dssp EECSCCCTTTCEEEEEEEECSSCEEEEE--EEEEEC
T ss_pred EEECCCCcccCEEEEEEEEeCCceEEEE--EEEEEE
Confidence 999999999999999999999 876666 777764
No 95
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.71 E-value=2.8e-16 Score=99.10 Aligned_cols=92 Identities=21% Similarity=0.287 Sum_probs=71.3
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCC---CeeEEEeCCEEecc---CcceEEEEe------cceEEEEEcccCCC
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPL---PAVSWFKDNVEITT---NKRLKIQFK------KKRSTLIITRIRSE 76 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~---p~i~W~~~g~~l~~---~~~~~~~~~------~~~~~L~i~~v~~~ 76 (176)
..|.|+..+.++.+.+|++++|.|.+.|.|. |.+.|+|++..... ..++.+... ....+|.|.+++.+
T Consensus 3 p~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 82 (108)
T 3cx2_A 3 PIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPA 82 (108)
T ss_dssp CCCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred CccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence 3577888889999999999999999999998 99999998732211 123333211 12578999999999
Q ss_pred CCEEEEEEEEcC-CCceEEEEEEEEEe
Q psy8425 77 DAGRYECRGTGV-HKDVVSAFAEVSIN 102 (176)
Q Consensus 77 d~G~Y~C~a~n~-g~~~~s~~~~l~V~ 102 (176)
|+|.|+|.|.|. |....+ +.|.|.
T Consensus 83 D~G~Y~C~a~N~~G~~~~~--~~L~V~ 107 (108)
T 3cx2_A 83 FTGSYRCEVSTKDKFDCSN--FNLTVH 107 (108)
T ss_dssp GCEEEEEEEECSSCEEEEE--EEEEEE
T ss_pred cCEEEEEEEecCCCceEEE--EEEEEe
Confidence 999999999999 777766 888875
No 96
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.70 E-value=4.3e-17 Score=101.20 Aligned_cols=91 Identities=20% Similarity=0.419 Sum_probs=72.0
Q ss_pred CCCeEEeCC----ceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceE-EEEecceEEEEEcccCCCCCEEEEE
Q psy8425 9 IHPIEVSGL----RNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLK-IQFKKKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 9 ~~p~~~~~~----~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~-~~~~~~~~~L~i~~v~~~d~G~Y~C 83 (176)
.+|.|...+ ..+.+.+|+.+.|.|.+.|.|.|.+.|+++|..+....+.. ........+|.|.++..+|+|.|+|
T Consensus 3 ~~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 82 (100)
T 3caf_A 3 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTC 82 (100)
T ss_dssp EEEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEE
Confidence 467776543 46788999999999999999999999999999887643321 1222455689999999999999999
Q ss_pred EEEcC-CCceEEEEEEEEE
Q psy8425 84 RGTGV-HKDVVSAFAEVSI 101 (176)
Q Consensus 84 ~a~n~-g~~~~s~~~~l~V 101 (176)
.|.|. |....+ +.|.|
T Consensus 83 ~a~N~~g~~~~~--~~l~V 99 (100)
T 3caf_A 83 VVENEYGSINHT--YHLDV 99 (100)
T ss_dssp EEEETTEEEEEE--EEEEE
T ss_pred EEEeCCCEEEEE--EEEEE
Confidence 99999 766655 66665
No 97
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.70 E-value=5.9e-17 Score=101.80 Aligned_cols=92 Identities=22% Similarity=0.385 Sum_probs=78.0
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
..+|.|...+.++.+.+|+++.|.|.+.+.|.+ +.|+|++..+....++.+........|.|.++..+|+|.|+|.|.|
T Consensus 6 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (106)
T 2dlt_A 6 SGQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDG 84 (106)
T ss_dssp CCCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEET
T ss_pred CCCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEcc
Confidence 457889999999999999999999999998887 9999999999887787776656667999999999999999999999
Q ss_pred CCCceEEEEEEEEEec
Q psy8425 88 VHKDVVSAFAEVSINL 103 (176)
Q Consensus 88 ~g~~~~s~~~~l~V~~ 103 (176)
. ....+ +.|.|..
T Consensus 85 ~-~~~~~--~~l~V~~ 97 (106)
T 2dlt_A 85 Y-ALSLS--AKLNFLE 97 (106)
T ss_dssp S-CCCCC--BCEEEEC
T ss_pred C-CceEE--EEEEEEE
Confidence 8 33334 5666653
No 98
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.70 E-value=2.3e-16 Score=97.19 Aligned_cols=87 Identities=15% Similarity=0.219 Sum_probs=73.7
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcCC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGVH 89 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~g 89 (176)
.|.|...+.++.+.+|+++.|.|.+ +.|.+.+.|+|++..+..+.++.+........|.|.+++.+|+|.|+|.+ +
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a---g 83 (95)
T 2k1m_A 8 VSAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA---G 83 (95)
T ss_dssp CCCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE---T
T ss_pred CCeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE---C
Confidence 4667777888999999999999999 78889999999999998877887776666778999999999999999999 3
Q ss_pred CceEEEEEEEEEe
Q psy8425 90 KDVVSAFAEVSIN 102 (176)
Q Consensus 90 ~~~~s~~~~l~V~ 102 (176)
....+ +.|.|.
T Consensus 84 ~~~~~--~~l~V~ 94 (95)
T 2k1m_A 84 SSKVK--FDLKVI 94 (95)
T ss_dssp TEEEE--EEEEEE
T ss_pred CceEE--EEEEEe
Confidence 33444 777775
No 99
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.70 E-value=7.1e-18 Score=108.69 Aligned_cols=100 Identities=19% Similarity=0.237 Sum_probs=82.2
Q ss_pred CCCccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCe-eEEEeCCEEecc--CcceEEEEe--cc--eEEEEEcccC
Q psy8425 2 SKGLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPA-VSWFKDNVEITT--NKRLKIQFK--KK--RSTLIITRIR 74 (176)
Q Consensus 2 s~~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~-i~W~~~g~~l~~--~~~~~~~~~--~~--~~~L~i~~v~ 74 (176)
+..|.|..+|.|.. +..+.+.+|+.+.|.|.+.|.|.|. +.|++++..+.. ..++.+... .. ..+|.|.++.
T Consensus 6 ~~~l~V~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 84 (122)
T 2cry_A 6 SGTLTVNGPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIV 84 (122)
T ss_dssp CCCCCCCSSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCC
T ss_pred EEEEEEecCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCC
Confidence 35688899999988 7888899999999999999999997 999999998875 355555321 22 5689999999
Q ss_pred CCCC-EEEEEEEEcC-CCceEEEEEEEEEecC
Q psy8425 75 SEDA-GRYECRGTGV-HKDVVSAFAEVSINLR 104 (176)
Q Consensus 75 ~~d~-G~Y~C~a~n~-g~~~~s~~~~l~V~~~ 104 (176)
.+|+ |.|+|.|.|. |..... +.|.|..+
T Consensus 85 ~~D~~G~Y~C~a~N~~G~~~~~--~~l~V~~~ 114 (122)
T 2cry_A 85 RADFQTIYNCTAWNSFGSDTEI--IRLKEQGS 114 (122)
T ss_dssp HHHHHSCEEEEEECSSCEEEEE--ECCCCSCS
T ss_pred hhhCCceEEEEEECCCCeEEEE--EEEEECCC
Confidence 9999 9999999999 877766 77777753
No 100
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.70 E-value=2.9e-16 Score=95.91 Aligned_cols=85 Identities=20% Similarity=0.342 Sum_probs=69.7
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
.++.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+... ....|.|.++..+|+|.|.|.|.|.
T Consensus 2 ~~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~---------~~~~L~i~~v~~~d~G~Y~C~a~n~ 72 (91)
T 3bfo_A 2 SKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE---------TKKLYMVPYVDLEHQGTYWCHVYND 72 (91)
T ss_dssp CCCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTC---------CSSEEEESSCCGGGCEEEEEEEECS
T ss_pred CceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcC---------CCCeEEECCCCHHhCEEEEEEEEcC
Confidence 3567777888889999999999999999999999999999988763 2358999999999999999999999
Q ss_pred -CCceEEEEEEEEEec
Q psy8425 89 -HKDVVSAFAEVSINL 103 (176)
Q Consensus 89 -g~~~~s~~~~l~V~~ 103 (176)
|... +..+.|.|..
T Consensus 73 ~g~~~-s~~~~l~V~~ 87 (91)
T 3bfo_A 73 RDSQD-SKKVEIIIDE 87 (91)
T ss_dssp SCEEE-CCCEEEEEC-
T ss_pred CCCEE-eeeEEEEEeh
Confidence 6433 3226666643
No 101
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.70 E-value=6.7e-17 Score=122.37 Aligned_cols=127 Identities=26% Similarity=0.428 Sum_probs=96.3
Q ss_pred CCeEEe-CCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 10 HPIEVS-GLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 10 ~p~~~~-~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
+|.+.. .+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ......|.|.++..+|+|.|+|.|.|.
T Consensus 206 ~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~------~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 279 (382)
T 1cs6_A 206 APSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSKW------LSSEPLLHIQNVDFEDEGTYECEAENI 279 (382)
T ss_dssp EEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSCCC------SBSSSEEEECSCCGGGCEEEEEEEEET
T ss_pred CCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccccEE------ecCCcEEEEccCChhhCEEEEEEEEcC
Confidence 555544 3567889999999999999999999999999887654311 134568999999999999999999999
Q ss_pred -CCceEEEEEEEEEecCCC---------------------CCCCCCCCC-------------eEEecCCEEEE----ecc
Q psy8425 89 -HKDVVSAFAEVSINLRPD---------------------NMGGPCPLD-------------SYCLNGGSCTY----YDT 129 (176)
Q Consensus 89 -g~~~~s~~~~l~V~~~p~---------------------~~g~p~p~~-------------~~~~~~~~~~i----~~d 129 (176)
|..... +.|.|..+|. +.|.|.|.. ++...++.|.| .+|
T Consensus 280 ~g~~~~~--~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~L~i~~v~~~d 357 (382)
T 1cs6_A 280 KGRDTYQ--GRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFSKLVLED 357 (382)
T ss_dssp TEEEEEE--EEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEETTEEEESSCCGGG
T ss_pred CCeEEEE--EEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEECCEEEECcCCccc
Confidence 766655 7888876554 334555422 22334567777 689
Q ss_pred CCeeEEEecCCcccCc
Q psy8425 130 VGELVCQCAEGYKGQR 145 (176)
Q Consensus 130 ~g~y~C~~~~n~~g~~ 145 (176)
+|.|.|. |.|..|..
T Consensus 358 ~G~Y~C~-a~N~~G~~ 372 (382)
T 1cs6_A 358 SGMYQCV-AENKHGTV 372 (382)
T ss_dssp CEEEEEE-EEETTEEE
T ss_pred CEEEEEE-EEeCCCeE
Confidence 9999999 99998864
No 102
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.69 E-value=4.4e-16 Score=97.67 Aligned_cols=97 Identities=15% Similarity=0.218 Sum_probs=72.5
Q ss_pred ccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCE-Eecc-------CcceEEEEe-cceEEEEEcccCCCC
Q psy8425 7 ATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNV-EITT-------NKRLKIQFK-KKRSTLIITRIRSED 77 (176)
Q Consensus 7 v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~-~l~~-------~~~~~~~~~-~~~~~L~i~~v~~~d 77 (176)
+..+|.+...+.++.+.+|+++.|.|.+.+.|.+.+.|++++. .+.. ..++.+... ....+|.|.+++.+|
T Consensus 3 v~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D 82 (108)
T 3m45_A 3 VKGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSD 82 (108)
T ss_dssp -----CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGG
T ss_pred cccCCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhH
Confidence 4456777778889999999999999999999999999999775 2221 234444322 356789999999999
Q ss_pred CEEEEEEEEcCCCceEEEEEEEEEecCC
Q psy8425 78 AGRYECRGTGVHKDVVSAFAEVSINLRP 105 (176)
Q Consensus 78 ~G~Y~C~a~n~g~~~~s~~~~l~V~~~p 105 (176)
+|.|+|.+.|.+..... +.|.|.++|
T Consensus 83 ~G~Y~C~~~n~~~~~~~--~~L~V~~~P 108 (108)
T 3m45_A 83 EGQYTCSLFTMPVKTSK--AYLTVLGVP 108 (108)
T ss_dssp CEEEEEEECSSSCEEEE--EEEEEECCC
T ss_pred CeEEEEEEEcCCCcEEE--EEEEEEcCC
Confidence 99999999995444444 889998766
No 103
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.69 E-value=3.9e-17 Score=105.49 Aligned_cols=91 Identities=19% Similarity=0.377 Sum_probs=71.0
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeec---CCCeeEEEeCCE-Eec--cCcceEEEEe--c----ceEEEEEcccCCCCC
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGN---PLPAVSWFKDNV-EIT--TNKRLKIQFK--K----KRSTLIITRIRSEDA 78 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~---p~p~i~W~~~g~-~l~--~~~~~~~~~~--~----~~~~L~i~~v~~~d~ 78 (176)
|.|+..|+++.+.+|++++|.|.+.+. |.|.+.|||+.. .+. ...++.+... . ...+|+|.++...|+
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Da 87 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFA 87 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSC
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccC
Confidence 557778899999999999999999875 889999999742 111 1233443211 1 257899999999999
Q ss_pred EEEEEEEEcC-CCceEEEEEEEEEec
Q psy8425 79 GRYECRGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 79 G~Y~C~a~n~-g~~~~s~~~~l~V~~ 103 (176)
|.|+|.|.|. +....+ +.|.|.+
T Consensus 88 G~Y~Cevsn~~g~~~~~--~~L~V~~ 111 (126)
T 2dav_A 88 GNYRCEVTYKDKFDSCS--FDLEVHE 111 (126)
T ss_dssp EEEEEEEECSSCEEEEC--CEEEEEC
T ss_pred EEEEEEEEeCCCcEEEE--EEEEEEe
Confidence 9999999999 776667 8999998
No 104
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.69 E-value=5.4e-17 Score=123.21 Aligned_cols=138 Identities=19% Similarity=0.272 Sum_probs=98.0
Q ss_pred ccccCCCeEEeCCceeEEecCCcEEEEEEEee-cCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEE
Q psy8425 5 LRATIHPIEVSGLRNVSVKLRQSLRLVCRCKG-NPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 5 l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g-~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 83 (176)
|.|..+|.|...+.++.+.+|+.+.|.|.+.+ .|.+.+.|+|+|..+....+ ........++|.|.+++.+|+|.|+|
T Consensus 1 l~v~~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~-~~~~~~~~~~L~i~~~~~~D~G~Y~C 79 (395)
T 1bih_A 1 LPVDKYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEH-NAALRKDEGSLVFLRPQASDEGHYQC 79 (395)
T ss_dssp ----CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTT-TEEECTTSCCEEESSCCGGGCEEEEE
T ss_pred CCcCCCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccc-eEEEecCCceEEEecCCCCCCcEEEE
Confidence 46788999999999999999999999999998 88899999999998876543 22222456789999999999999999
Q ss_pred EEEcC-CCceEEEEEEEEEe--cCCC--------------------CCCCCCCCCeEE---------------------e
Q psy8425 84 RGTGV-HKDVVSAFAEVSIN--LRPD--------------------NMGGPCPLDSYC---------------------L 119 (176)
Q Consensus 84 ~a~n~-g~~~~s~~~~l~V~--~~p~--------------------~~g~p~p~~~~~---------------------~ 119 (176)
.+.|. |... +..+.|.|. ..|. ..|.|.|...+. .
T Consensus 80 ~a~n~~g~~~-s~~~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~ 158 (395)
T 1bih_A 80 FAETPAGVAS-SRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAG 158 (395)
T ss_dssp EEEETTEEEE-CCCEEEEEEEEECCCCEEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEEC
T ss_pred EEEeCCCeEE-eEEEEEEEEEeecCCcCCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEc
Confidence 99998 5432 111444443 2222 124444422222 2
Q ss_pred cCCEEEE----eccCC---eeEEEecCCcccCc
Q psy8425 120 NGGSCTY----YDTVG---ELVCQCAEGYKGQR 145 (176)
Q Consensus 120 ~~~~~~i----~~d~g---~y~C~~~~n~~g~~ 145 (176)
.++.+.| .+|.| .|.|. +.|..|..
T Consensus 159 ~~~~L~i~~v~~~d~G~~~~Y~C~-a~n~~~~~ 190 (395)
T 1bih_A 159 PDGNLYFTIVTKEDVSDIYKYVCT-AKNAAVDE 190 (395)
T ss_dssp TTSCEEEEEECGGGCCSSEEEEEE-EECTTCSS
T ss_pred CCCcEEEEEEeeccCCCceEEEEE-EEecccce
Confidence 3456666 68999 99999 88888763
No 105
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.69 E-value=1.4e-16 Score=99.49 Aligned_cols=93 Identities=19% Similarity=0.360 Sum_probs=78.1
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
..+|.|...+.++.+.+|+++.|.|.+.+.|.+ +.|+|++..+..+.++.+........|.|.+++.+|+|.|+|.
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~--- 81 (103)
T 2e7b_A 6 SGPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS--- 81 (103)
T ss_dssp CCCCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE---
T ss_pred CCCCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE---
Confidence 457888888889999999999999999999999 9999999998877777777656667899999999999999998
Q ss_pred CCCceEEEEEEEEEecCCC
Q psy8425 88 VHKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 88 ~g~~~~s~~~~l~V~~~p~ 106 (176)
.+....+ +.|.|..+|.
T Consensus 82 ~g~~~~~--~~l~V~~~p~ 98 (103)
T 2e7b_A 82 FGDQTTS--ATLTVTALPS 98 (103)
T ss_dssp CSSCBCC--BCEEEECCCC
T ss_pred ECCcEEE--EEEEEEeccc
Confidence 3334444 7788887664
No 106
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.69 E-value=1.1e-16 Score=111.75 Aligned_cols=76 Identities=16% Similarity=0.162 Sum_probs=62.3
Q ss_pred ecCCcEEEEEEEeec-CCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CCceEEEEEEEE
Q psy8425 23 KLRQSLRLVCRCKGN-PLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HKDVVSAFAEVS 100 (176)
Q Consensus 23 ~~G~~~~l~C~~~g~-p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~ 100 (176)
-.++.+.|.|.+.+. |.+.+.|+|+|..+....++.+........|.|.+++.+|+|.|+|.+.|. +....+ +.|.
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~--~~l~ 92 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKT--VDLS 92 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEE--EEEC
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEE--EEEE
Confidence 367788889988874 578999999999998878877766666678999999999999999999998 655444 5554
No 107
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.69 E-value=1.5e-16 Score=112.47 Aligned_cols=95 Identities=13% Similarity=0.086 Sum_probs=67.6
Q ss_pred cccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceE--EEEEcccCCCCCEEEEE
Q psy8425 6 RATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRS--TLIITRIRSEDAGRYEC 83 (176)
Q Consensus 6 ~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C 83 (176)
.+..+|.|...+. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+....+ ......... .|.|.+++.+|+|.|+|
T Consensus 5 ~~~~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 81 (218)
T 1uct_A 5 GDFPMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIG-RRLKFWNETDPEFVIDHMDANKAGRYQC 81 (218)
T ss_dssp GGSCCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECS-EECC----CCCEEEECSCCGGGCEEEEE
T ss_pred CCCCCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCccccccc-ccCCCCcceeeEEEEcccccccCEEEEE
Confidence 3456788887776 47899999999999986 6789999999876543211 111012334 89999999999999999
Q ss_pred EEEcC-CCceEEEEEEEEEec
Q psy8425 84 RGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 84 ~a~n~-g~~~~s~~~~l~V~~ 103 (176)
.+.|. +....+..+.|.|..
T Consensus 82 ~a~n~~~~~~~s~~~~l~V~~ 102 (218)
T 1uct_A 82 QYRIGHYRFRYSDTLELVVTG 102 (218)
T ss_dssp EEEETTTEEEECCCEEEEEEC
T ss_pred EEEcCCCceeecCCEEEEEcC
Confidence 99997 543334336677754
No 108
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.69 E-value=3.7e-17 Score=111.48 Aligned_cols=122 Identities=14% Similarity=0.171 Sum_probs=86.2
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCC-eeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLP-AVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
..+|.+...+..+.+.+|+++.|.|.+.+.|.+ .+.|++++..+.. ....|.|.+++.+|+|.|+|.+.
T Consensus 2 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~----------~~~~L~i~~v~~~d~G~Y~C~~~ 71 (176)
T 1f2q_A 2 PQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEE----------TNSSLNIVNAKFEDSGEYKCQHQ 71 (176)
T ss_dssp --CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSC----------CSSEEEECSCCGGGCEEEEEECT
T ss_pred CCCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCC----------CceEEEEeccceecCEEEEEEcC
Confidence 457788877888889999999999999988886 6999999988764 24689999999999999999999
Q ss_pred cC-CCceEEEEEEEEEecCCC--------------------C-CCCCCCCCeEEec---------CCEEEE----eccCC
Q psy8425 87 GV-HKDVVSAFAEVSINLRPD--------------------N-MGGPCPLDSYCLN---------GGSCTY----YDTVG 131 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~~~p~--------------------~-~g~p~p~~~~~~~---------~~~~~i----~~d~g 131 (176)
|. +... +.|.|..++. + .+.|.|...+..+ ++.+.| .+|+|
T Consensus 72 ~~~~s~~----~~l~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G 147 (176)
T 1f2q_A 72 QVNESEP----VYLEVFSDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVEDSG 147 (176)
T ss_dssp TSSCCCC----EEEEEECSSEEEEESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCCCSSEEEESSCCGGGCE
T ss_pred Ccccccc----EEEEEeCcceeecCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeecCCCeEEECCCCcccCE
Confidence 87 4333 5566653221 2 2333332233322 456666 68999
Q ss_pred eeEEEecCCcccC
Q psy8425 132 ELVCQCAEGYKGQ 144 (176)
Q Consensus 132 ~y~C~~~~n~~g~ 144 (176)
.|.|. |.|..|.
T Consensus 148 ~Y~C~-a~n~~~~ 159 (176)
T 1f2q_A 148 TYYCT-GKVWQLD 159 (176)
T ss_dssp EEEEE-EEETTEE
T ss_pred EEEEE-EEeCCcc
Confidence 99999 8775443
No 109
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.69 E-value=8.3e-17 Score=122.49 Aligned_cols=138 Identities=20% Similarity=0.334 Sum_probs=98.9
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcce-EEEEecceEEEEEcccCCCCCEEEE
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRL-KIQFKKKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~ 82 (176)
.|.+..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+...... +... ...+.|.|.++..+|+|.|+
T Consensus 115 ~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~ 193 (403)
T 3laf_A 115 KVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVV-LPSGALQISRLQPGDSGVYR 193 (403)
T ss_dssp EEEECCCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEE-CTTSCEEECSCCGGGCEEEE
T ss_pred EEEecCCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEE-cCCceEEEcccccccCEEEE
Confidence 345667888888888889999999999999999999999999999887532111 1111 34568999999999999999
Q ss_pred EEEEcC-CCce-EEEEEEEEEecCCC---------------------------CCCCCCCCCeE---------------E
Q psy8425 83 CRGTGV-HKDV-VSAFAEVSINLRPD---------------------------NMGGPCPLDSY---------------C 118 (176)
Q Consensus 83 C~a~n~-g~~~-~s~~~~l~V~~~p~---------------------------~~g~p~p~~~~---------------~ 118 (176)
|.+.|. +... .. +.|.|...|. ..|.|.|...+ .
T Consensus 194 C~~~n~~~~~~~~~--~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~ 271 (403)
T 3laf_A 194 CSARNPASTRTGNE--AEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSL 271 (403)
T ss_dssp EEEECSSCCCBCCC--EEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEE
T ss_pred EEEEcCCCceeccc--eeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEE
Confidence 999998 4432 33 6666665442 22334331122 2
Q ss_pred ecCCEEEE----eccCCeeEEEecCCcccCc
Q psy8425 119 LNGGSCTY----YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 119 ~~~~~~~i----~~d~g~y~C~~~~n~~g~~ 145 (176)
..++.+.| .+|.|.|.|. +.|..|..
T Consensus 272 ~~~~~L~i~~~~~~d~G~Y~C~-a~n~~g~~ 301 (403)
T 3laf_A 272 LGGSNLLISNVTDDDSGTYTCV-VTYKNENI 301 (403)
T ss_dssp ETTTEEEECSCCGGGCEEEEEE-EEETTEEE
T ss_pred CCccEEEEeCCCHHHCEEEEEE-EEcCCCce
Confidence 23456777 6899999999 88877754
No 110
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.68 E-value=5.5e-16 Score=96.72 Aligned_cols=93 Identities=17% Similarity=0.311 Sum_probs=77.9
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
..+|.|...+.++.+.+|+++.|.|. .+.|.|.+.|+|++..+....++.+........|.|.++..+|+|.|+|.
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~-~~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~--- 81 (103)
T 2dku_A 6 SGANCFTEELTNLQVEEKGTAVFTCK-TEHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD--- 81 (103)
T ss_dssp CCCCCCSSCCCCEEEETTSEEEEEEE-CSSCCSCCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE---
T ss_pred CCCCEeEecCCcEEEeCCCcEEEEEE-eCCCCCeEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE---
Confidence 35778888888999999999999999 58899999999999999887787776555666899999999999999998
Q ss_pred CCCceEEEEEEEEEecCCC
Q psy8425 88 VHKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 88 ~g~~~~s~~~~l~V~~~p~ 106 (176)
.+....+ +.|.|..+|.
T Consensus 82 ~g~~~~~--~~l~V~~~p~ 98 (103)
T 2dku_A 82 IGQAQSR--AQLLVQGRRS 98 (103)
T ss_dssp CSSCBCC--EEEEEECSCC
T ss_pred eCCceEE--EEEEEeCccC
Confidence 3444445 8889987665
No 111
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.68 E-value=5.4e-16 Score=97.22 Aligned_cols=91 Identities=20% Similarity=0.277 Sum_probs=73.2
Q ss_pred cccCCCeEEeCCce-eEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccC-cceEEEEecceEEEEEcccCCCCCEEEEE
Q psy8425 6 RATIHPIEVSGLRN-VSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTN-KRLKIQFKKKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 6 ~v~~~p~~~~~~~~-~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 83 (176)
....+|.|+..+.+ +.+.+|+++.|.|.+ +.|.+.+.|+|+|..+..+ .++.+........|.|.++..+|+|.|.|
T Consensus 11 ~~~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 89 (104)
T 1pd6_A 11 DEKKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQC 89 (104)
T ss_dssp CCSTTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEE
T ss_pred CccCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEE
Confidence 34567888776665 889999999999999 7888999999999999876 67777655566799999999999999999
Q ss_pred EEEcCCCceEEEEEEEEEe
Q psy8425 84 RGTGVHKDVVSAFAEVSIN 102 (176)
Q Consensus 84 ~a~n~g~~~~s~~~~l~V~ 102 (176)
.+.+. ..+ +.|.|.
T Consensus 90 ~a~~~---~~~--~~l~V~ 103 (104)
T 1pd6_A 90 VVGGE---KCS--TELFVK 103 (104)
T ss_dssp EETTE---EEC--CEEEEE
T ss_pred EECCC---cEE--EEEEEe
Confidence 99442 333 566664
No 112
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.68 E-value=2.2e-16 Score=112.80 Aligned_cols=91 Identities=19% Similarity=0.253 Sum_probs=63.8
Q ss_pred EEeCCceeEEecCCcEEEEEEEee---cCCCeeEEEeCCEEec------------------------------cCcceEE
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKG---NPLPAVSWFKDNVEIT------------------------------TNKRLKI 59 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g---~p~p~i~W~~~g~~l~------------------------------~~~~~~~ 59 (176)
+..++..+.+.+|+++.|.|.+.+ .|.+.+.|++++.... ...+..+
T Consensus 5 v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 84 (250)
T 2fbo_J 5 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 84 (250)
T ss_dssp EECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEEC
T ss_pred EEcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEe
Confidence 344556788999999999999988 7888999999874321 0011111
Q ss_pred EEecceEEEEEcccCCCCCEEEEEEEEcC-CCce---EEEEEEEEEecC
Q psy8425 60 QFKKKRSTLIITRIRSEDAGRYECRGTGV-HKDV---VSAFAEVSINLR 104 (176)
Q Consensus 60 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~---~s~~~~l~V~~~ 104 (176)
.. ....+|.|.+++.+|+|.|.|.+.|. +... .+..+.|.|..+
T Consensus 85 ~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~ 132 (250)
T 2fbo_J 85 AN-LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH 132 (250)
T ss_dssp SC-TTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTT
T ss_pred cc-CCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEecc
Confidence 00 12357999999999999999999998 4331 122278888764
No 113
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.67 E-value=6.6e-16 Score=110.93 Aligned_cols=121 Identities=19% Similarity=0.220 Sum_probs=90.4
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCC-eeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLP-AVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
+|.|...+.+..+.+|+.+.|.|.+.+.|.+ .+.|+++|..+... ...|.|.+++.+|+|.|+|.+.|.
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~----------~~~l~i~~~~~~d~G~Y~C~~~~~ 70 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS----------TPSYRITSASVNDSGEYRCQRGLS 70 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCC----------SSEEEESSCCGGGCEEEEEEESSS
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeecc----------CCeEEEecCCcccCeEEEEEEecC
Confidence 4788888888899999999999999999888 99999999987652 357999999999999999999987
Q ss_pred -CCceEEEEEEEEEecCCC--------------------C-CCCCCCCCeEEec---------CCEEEE----eccCCee
Q psy8425 89 -HKDVVSAFAEVSINLRPD--------------------N-MGGPCPLDSYCLN---------GGSCTY----YDTVGEL 133 (176)
Q Consensus 89 -g~~~~s~~~~l~V~~~p~--------------------~-~g~p~p~~~~~~~---------~~~~~i----~~d~g~y 133 (176)
+.. . +.|.|..++. . .+.|.+...+..+ ++.+.| .+|.|.|
T Consensus 71 ~~s~--~--~~l~v~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~~~~~~l~i~~~~~~d~G~Y 146 (262)
T 3rjd_A 71 GRSD--P--IQLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTY 146 (262)
T ss_dssp CCCC--C--EEEEEECSSEEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEE
T ss_pred Cccc--c--EEEEEeccceEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccccCCCCeEEEEECChhhCEEE
Confidence 443 3 5566654332 1 3344332233333 344555 6899999
Q ss_pred EEEecCCcccCc
Q psy8425 134 VCQCAEGYKGQR 145 (176)
Q Consensus 134 ~C~~~~n~~g~~ 145 (176)
.|. +.|..|..
T Consensus 147 ~C~-~~n~~~~~ 157 (262)
T 3rjd_A 147 HCS-GMGKHRYT 157 (262)
T ss_dssp EEE-EESSSEEE
T ss_pred EEE-EeCCCCcc
Confidence 999 87777643
No 114
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.67 E-value=2.3e-15 Score=103.48 Aligned_cols=98 Identities=24% Similarity=0.370 Sum_probs=81.5
Q ss_pred CCccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEe--CCEEec---cCcceEEEEecceEEEEEcccC-CC
Q psy8425 3 KGLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFK--DNVEIT---TNKRLKIQFKKKRSTLIITRIR-SE 76 (176)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~--~g~~l~---~~~~~~~~~~~~~~~L~i~~v~-~~ 76 (176)
..|.|..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+. ...++.+.......+|.|.++. .+
T Consensus 85 ~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~ 164 (190)
T 2wv3_A 85 ATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITE 164 (190)
T ss_dssp EEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTT
T ss_pred EEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccC
Confidence 35677889998888888889999999999999999999999999 888775 3455555544555789999999 79
Q ss_pred CCEEEEEEEEcC-CCceEEEEEEEEEe
Q psy8425 77 DAGRYECRGTGV-HKDVVSAFAEVSIN 102 (176)
Q Consensus 77 d~G~Y~C~a~n~-g~~~~s~~~~l~V~ 102 (176)
|+|.|+|.|.|. |....+ +.|.|.
T Consensus 165 d~G~Y~C~a~N~~g~~~~~--~~l~V~ 189 (190)
T 2wv3_A 165 DPGEYECNATNSIGSASVS--TVLRVR 189 (190)
T ss_dssp SCEEEEEEEECSSCEEEEE--EEEEEE
T ss_pred CCEEEEEEEEecCCcceeE--EEEEEE
Confidence 999999999999 777766 777765
No 115
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=8.3e-17 Score=99.32 Aligned_cols=87 Identities=25% Similarity=0.379 Sum_probs=71.6
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
..+|.+...+....+.+|+++.|.|.+.+.|.|.+.|+|++..+... ....|.|.+++.+|+|.|.|.+.|
T Consensus 8 ~~~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~---------~~~~L~i~~v~~~d~G~Y~C~a~n 78 (96)
T 2ens_A 8 LEEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLP---------PSPVLILPEIGPQDQGTYSCVATH 78 (96)
T ss_dssp CCSCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSC---------CCSEEEEESCCTTTCEEEECEECC
T ss_pred CCCCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCC---------CCCEEEECCCCcccCEEEEEEEEe
Confidence 35677777788888999999999999999999999999999887652 346899999999999999999999
Q ss_pred C-CCceEEEEEEEEEec
Q psy8425 88 V-HKDVVSAFAEVSINL 103 (176)
Q Consensus 88 ~-g~~~~s~~~~l~V~~ 103 (176)
. +....+..+.|.|.+
T Consensus 79 ~~~~~~~s~~~~v~V~~ 95 (96)
T 2ens_A 79 SSHGPQESRAVSISIIE 95 (96)
T ss_dssp SSCCCEECCCEEEEECC
T ss_pred CCCCcEEEEEEEEEEeC
Confidence 7 665555336666643
No 116
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.67 E-value=6.2e-17 Score=118.34 Aligned_cols=137 Identities=12% Similarity=0.029 Sum_probs=97.3
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeecCC-CeeEE-EeCCEEeccCcceEEEEecceEEEEEcccCCCCCE-E
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPL-PAVSW-FKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAG-R 80 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~-p~i~W-~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G-~ 80 (176)
.|.|..+|.+...+....+.+|+.+.|.|.+.+ |. +.+.| +++|..+....++.. .....|.|.++..+|+| .
T Consensus 85 ~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~---~~~~~L~i~~v~~~d~G~~ 160 (290)
T 2o26_X 85 YVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVP---NPKAGITIKNVKRAYHRLC 160 (290)
T ss_dssp EEEEECSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEE---ETTTEEEEESCCGGGTTCE
T ss_pred EEEEeCCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceee---CCCCCEEEecccHHHCCCE
Confidence 456666776556667788899999999999985 77 89999 568888766544333 23357999999999999 9
Q ss_pred EEEEEEcCCCceEEEEEEEEEe----cCCC---------------------CCCCCCCC-CeEEecC-------------
Q psy8425 81 YECRGTGVHKDVVSAFAEVSIN----LRPD---------------------NMGGPCPL-DSYCLNG------------- 121 (176)
Q Consensus 81 Y~C~a~n~g~~~~s~~~~l~V~----~~p~---------------------~~g~p~p~-~~~~~~~------------- 121 (176)
|+|.|.|.+....+..+.|.|. .+|. +.|.|.|. ..|..++
T Consensus 161 Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~ 240 (290)
T 2o26_X 161 VRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNS 240 (290)
T ss_dssp EEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCE
T ss_pred EEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccc
Confidence 9999999843333322667765 3333 33556553 3343333
Q ss_pred -----------CEEEE----eccCCeeEEEecCCcccCc
Q psy8425 122 -----------GSCTY----YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 122 -----------~~~~i----~~d~g~y~C~~~~n~~g~~ 145 (176)
+.|.| .+|+|.|.|. |.|..|..
T Consensus 241 ~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~-a~N~~g~~ 278 (290)
T 2o26_X 241 WHRGDFNYERQETLTISSARVDDSGVFMCY-ANNTFGSA 278 (290)
T ss_dssp EEEETTEEEEEEEEEESSCCSSSCEEEEEE-EECSSCEE
T ss_pred cccCceeeEEEEEEEEcCCCcccCeEEEEE-EeCCCCcE
Confidence 23444 6899999999 99998876
No 117
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.67 E-value=5.2e-16 Score=108.58 Aligned_cols=90 Identities=18% Similarity=0.198 Sum_probs=66.4
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeC--CEEec------------cCcceEEEEecceEEEEEcccCCCC
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKD--NVEIT------------TNKRLKIQFKKKRSTLIITRIRSED 77 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~i~~v~~~d 77 (176)
.+..++ .+.+.+|++++|.|.+.+.|.+.+.|+|. +.... ...++.+.......+|.|.+++.+|
T Consensus 3 ~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 81 (213)
T 3mj8_L 3 TLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGD 81 (213)
T ss_dssp CBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhh
Confidence 344555 78899999999999999999999999982 22111 2245555445677899999999999
Q ss_pred CEEEEEEEEcC-CC-ceEEEEEEEEEe
Q psy8425 78 AGRYECRGTGV-HK-DVVSAFAEVSIN 102 (176)
Q Consensus 78 ~G~Y~C~a~n~-g~-~~~s~~~~l~V~ 102 (176)
+|.|.|.+.|. +. ......+.|.|.
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~ 108 (213)
T 3mj8_L 82 EADYYCQSWDGTNSAWVFGSGTKVTVL 108 (213)
T ss_dssp CEEEEEEEEETTTTEEEEBCCEEEEEE
T ss_pred CEEEEEEeccCCcceeEEcCceEEEEe
Confidence 99999999998 52 122222677777
No 118
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=1.2e-16 Score=102.01 Aligned_cols=93 Identities=18% Similarity=0.315 Sum_probs=71.7
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeec---CCCeeEEEeCC-EEecc--CcceEEEEe-c-----ceEEEEEcccCCCC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGN---PLPAVSWFKDN-VEITT--NKRLKIQFK-K-----KRSTLIITRIRSED 77 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~---p~p~i~W~~~g-~~l~~--~~~~~~~~~-~-----~~~~L~i~~v~~~d 77 (176)
.+.|+..|.++.+.+|++++|.|.+.|. |.|.|.|||+. ..+.. ..++.+... . ...+|.|.++...|
T Consensus 12 ~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 91 (118)
T 2edn_A 12 TGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGD 91 (118)
T ss_dssp SSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTT
T ss_pred cceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhh
Confidence 4567888999999999999999999875 78999999974 12221 223333211 1 25789999999999
Q ss_pred CEEEEEEEEcC-CCceEEEEEEEEEecC
Q psy8425 78 AGRYECRGTGV-HKDVVSAFAEVSINLR 104 (176)
Q Consensus 78 ~G~Y~C~a~n~-g~~~~s~~~~l~V~~~ 104 (176)
+|.|+|.+.|. |..... +.|.|.++
T Consensus 92 ~G~Y~Cevsn~~g~~s~~--~~L~V~~~ 117 (118)
T 2edn_A 92 RGYYRLEVKAKDTCDSCG--FNIDVEAP 117 (118)
T ss_dssp CSCEEEEEECSSCEEEEE--ECCEEECC
T ss_pred CEEEEEEEEEcCCcEEEE--EEEEEEcC
Confidence 99999999999 766666 89998874
No 119
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.67 E-value=3.2e-16 Score=119.16 Aligned_cols=138 Identities=20% Similarity=0.353 Sum_probs=96.9
Q ss_pred cccCCCeEEe-CCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEc----ccCCCCCEE
Q psy8425 6 RATIHPIEVS-GLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIIT----RIRSEDAGR 80 (176)
Q Consensus 6 ~v~~~p~~~~-~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~----~v~~~d~G~ 80 (176)
.+..+|.+.. .+.+..+.+|+.+.|.|.+.|.|.+.+.|+|+|..+......++.....+++|.|. +++.+|+|.
T Consensus 12 ~~~~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~ 91 (404)
T 3p3y_A 12 ELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 91 (404)
T ss_dssp -CCCCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEE
T ss_pred hccCCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEecCCceEEEEeccCCCCccCCEE
Confidence 3557888764 56778899999999999999999999999999998865332222222345566664 788899999
Q ss_pred EEEEEEcC-CCceEEEEEEEEEecCCC----------------------C-CCCCCCCCeEE---------------ecC
Q psy8425 81 YECRGTGV-HKDVVSAFAEVSINLRPD----------------------N-MGGPCPLDSYC---------------LNG 121 (176)
Q Consensus 81 Y~C~a~n~-g~~~~s~~~~l~V~~~p~----------------------~-~g~p~p~~~~~---------------~~~ 121 (176)
|+|.+.|. |... +..+.|.|..+|. . .|.|.+...+. ..+
T Consensus 92 Y~C~a~n~~g~~~-s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~ 170 (404)
T 3p3y_A 92 YQCFARNKFGTAL-SNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHN 170 (404)
T ss_dssp EEEEEECSSCEEE-EEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECTT
T ss_pred EEEEEEcCCCeEe-eeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcCC
Confidence 99999998 5543 2227888877654 2 34444321222 235
Q ss_pred CEEEE----ecc-CCeeEEEecCCcccCc
Q psy8425 122 GSCTY----YDT-VGELVCQCAEGYKGQR 145 (176)
Q Consensus 122 ~~~~i----~~d-~g~y~C~~~~n~~g~~ 145 (176)
+.+.| .+| .|.|.|. +.|..|..
T Consensus 171 ~~l~i~~v~~~d~~G~Y~C~-a~n~~~~~ 198 (404)
T 3p3y_A 171 GDLYFSNVMLQDMQTDYSCN-ARFHFTHT 198 (404)
T ss_dssp SCEEESSCCSGGGSSCBEEE-EECTTTCC
T ss_pred CcEEEEeeeeccCCcceEEE-EEeccccc
Confidence 66776 567 5999999 88877754
No 120
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.66 E-value=1.7e-16 Score=109.02 Aligned_cols=85 Identities=18% Similarity=0.135 Sum_probs=65.1
Q ss_pred ccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 7 ATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 7 v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
+..+|.+...+.. .+.+|++++|.|.+.+ +.+.+.|+|+|.... .....|.|.+++.+|+|.|+|.+.
T Consensus 5 ~~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~~----------~~~~~L~i~~v~~~D~G~Y~C~a~ 72 (184)
T 2gi7_A 5 PLPKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSRY----------QDQAVLFIPAMKRSLAGRYRCSYQ 72 (184)
T ss_dssp CBCCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCCE----------ESSSEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCcccc----------CcccEEEECcCChhhCceEEEEEE
Confidence 4567888776664 7899999999999887 778999999986510 345689999999999999999999
Q ss_pred cC-CCceEEEEEEEEEec
Q psy8425 87 GV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~~ 103 (176)
|. +....+..+.|.|..
T Consensus 73 n~~g~~~~s~~~~l~V~~ 90 (184)
T 2gi7_A 73 NGSLWSLPSDQLELVATG 90 (184)
T ss_dssp ETTEEBCCCCCEEEEEES
T ss_pred cCCCccCCCCCEEEEecC
Confidence 97 432222226666643
No 121
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.66 E-value=8e-17 Score=120.20 Aligned_cols=133 Identities=14% Similarity=0.145 Sum_probs=97.7
Q ss_pred ccCCCeEEeCCceeEEecCCcEEEEEEEe-------ecCCCeeEEEeCCEEe--ccCcceEEEEecceEEEEEcccCCCC
Q psy8425 7 ATIHPIEVSGLRNVSVKLRQSLRLVCRCK-------GNPLPAVSWFKDNVEI--TTNKRLKIQFKKKRSTLIITRIRSED 77 (176)
Q Consensus 7 v~~~p~~~~~~~~~~v~~G~~~~l~C~~~-------g~p~p~i~W~~~g~~l--~~~~~~~~~~~~~~~~L~i~~v~~~d 77 (176)
....|.|...+.++.+.+|+.+.|.|.+. +.|.+.+.|++++..+ ....+.++.. .+.+|.|.+++.+|
T Consensus 15 ~~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~--~~~~L~i~~v~~~D 92 (339)
T 3o4o_C 15 ARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWA--QDGALWLLPALQED 92 (339)
T ss_dssp ---CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEE--ETTEEEESSBCTTC
T ss_pred chhhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEe--eCCeEEECCCCccc
Confidence 34568888889999999999999999998 8899999999999874 3322233332 34589999999999
Q ss_pred CEEEEEEEEcC-CCceEEEEEEEEEecCCC----------------------------CCCCCCCCCeEE----------
Q psy8425 78 AGRYECRGTGV-HKDVVSAFAEVSINLRPD----------------------------NMGGPCPLDSYC---------- 118 (176)
Q Consensus 78 ~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p~----------------------------~~g~p~p~~~~~---------- 118 (176)
+|.|+|.+.|. +....+ +.|.|..+|. ..|.|.|...+.
T Consensus 93 ~G~Y~C~~~n~~g~~~~~--~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~ 170 (339)
T 3o4o_C 93 SGTYVCTTRNASYCDKMS--IELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDN 170 (339)
T ss_dssp CEEEECCEEETTEEEEEE--EEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTC
T ss_pred CEEEEEEEECCcceEEEE--EEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCC
Confidence 99999999998 655555 7888876543 234555522222
Q ss_pred ----e-cC-CEEEE----eccCCeeEEEecCCcccC
Q psy8425 119 ----L-NG-GSCTY----YDTVGELVCQCAEGYKGQ 144 (176)
Q Consensus 119 ----~-~~-~~~~i----~~d~g~y~C~~~~n~~g~ 144 (176)
. .+ +.|.| .+|.|.|.|. +.|..|.
T Consensus 171 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~-a~n~~g~ 205 (339)
T 3o4o_C 171 EKFLSVRGTTHLLVHDVALEDAGYYRCV-LTFAHEG 205 (339)
T ss_dssp SSEEECTTSSEEEESSCCGGGCEEEEEE-EECCBTT
T ss_pred ceeEEcCCcceEEEcccCHhhCeEEEEE-EEECCCC
Confidence 1 12 46777 6899999999 8887774
No 122
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.66 E-value=1.8e-16 Score=130.89 Aligned_cols=139 Identities=19% Similarity=0.368 Sum_probs=103.1
Q ss_pred ccccCCCeEEe-CCceeEEecCCcEEEEEEEeecCCC-eeEEEeCCEEeccCcceEEEE-ecceEEEEEcccCCCCCEEE
Q psy8425 5 LRATIHPIEVS-GLRNVSVKLRQSLRLVCRCKGNPLP-AVSWFKDNVEITTNKRLKIQF-KKKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 5 l~v~~~p~~~~-~~~~~~v~~G~~~~l~C~~~g~p~p-~i~W~~~g~~l~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y 81 (176)
|.+..+|.+.. ......+.+|+.+.|.|.+.+.+.| .+.|+++|..+....++.+.. ......|.|.++..+|+|.|
T Consensus 613 v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 692 (816)
T 3dmk_A 613 VQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNF 692 (816)
T ss_dssp EEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEE
T ss_pred EEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEE
Confidence 44555665543 2345568899999999999876665 899999999887655544432 24567899999999999999
Q ss_pred EEEEEcC-CCceEEEEEEEEEecCCC---------------------CCCCCCCCC--------------------eEEe
Q psy8425 82 ECRGTGV-HKDVVSAFAEVSINLRPD---------------------NMGGPCPLD--------------------SYCL 119 (176)
Q Consensus 82 ~C~a~n~-g~~~~s~~~~l~V~~~p~---------------------~~g~p~p~~--------------------~~~~ 119 (176)
+|.|.|. |....+ +.|.|..+|. +.|.|.|.. ....
T Consensus 693 ~C~a~N~~g~~~~~--~~l~V~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~ 770 (816)
T 3dmk_A 693 TCHARNLAGHQQFT--TPLNVYVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRV 770 (816)
T ss_dssp EEEEECSSCEEEEE--EEECEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEECCEECSSSTTCCBCCCCBTTEEE
T ss_pred EEEEEeCCccEEEE--EEEEEEeCCceeeecccceecCCCcEEEEEEEecCCCCeEEEEecCCCCCccccccccCCCEEe
Confidence 9999999 777766 7888877664 334455421 1233
Q ss_pred cCCEEEE----eccCCeeEEEecCCcccCcC
Q psy8425 120 NGGSCTY----YDTVGELVCQCAEGYKGQRC 146 (176)
Q Consensus 120 ~~~~~~i----~~d~g~y~C~~~~n~~g~~c 146 (176)
.++.|.| .+|+|.|.|. |.|..|..-
T Consensus 771 ~~~~L~i~~v~~~d~G~Y~C~-a~N~~G~~~ 800 (816)
T 3dmk_A 771 EEGTLHVDNIQKTNEGYYLCE-AINGIGSGL 800 (816)
T ss_dssp ETTEEEECSCCGGGCEEEEEE-EECSSSSCE
T ss_pred cCCEEEECcCChhhCeEEEEE-EEeCCCCCc
Confidence 5667888 6899999999 999999754
No 123
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.66 E-value=6.5e-16 Score=123.07 Aligned_cols=98 Identities=17% Similarity=0.170 Sum_probs=75.3
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCee----EEEe--CCE--Eecc---------CcceEEEEe--cc
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAV----SWFK--DNV--EITT---------NKRLKIQFK--KK 64 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i----~W~~--~g~--~l~~---------~~~~~~~~~--~~ 64 (176)
.|.|..+|.+...+..+.+.+|+.+.|.|.+.+.|.|.+ .|++ +|. .+.. ..++.+... ..
T Consensus 325 ~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g 404 (585)
T 2ocw_A 325 QLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNG 404 (585)
T ss_pred EEEEecccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCc
Confidence 467778888888888889999999999999999999977 7999 886 4432 233333221 22
Q ss_pred eEEEEEcccCCCCCEEEEEEEEcC-CCceEEEEEEEEEecC
Q psy8425 65 RSTLIITRIRSEDAGRYECRGTGV-HKDVVSAFAEVSINLR 104 (176)
Q Consensus 65 ~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~~ 104 (176)
..+|.|.+++.+|+|.|+|.| |. +....+ +.|.|..+
T Consensus 405 ~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~--~~l~V~~~ 442 (585)
T 2ocw_A 405 TFTVILNQLTSRDAGFYWCLT-NGDTLWRTT--VEIKIIEG 442 (585)
T ss_pred EEEEEECCCChhhCEEEEEcc-cCCCcccee--EEEEEecC
Confidence 235999999999999999999 77 766666 88888763
No 124
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.66 E-value=1e-15 Score=123.34 Aligned_cols=129 Identities=17% Similarity=0.325 Sum_probs=98.0
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV- 88 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~- 88 (176)
+|.+. ......+.+|+.+.|.|.+.+ |.+.+.|+++|..+....++.+. ..+.+|.|.++..+|+|.|+|.|.|.
T Consensus 468 ~p~i~-~~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~~g~~l~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 543 (642)
T 1e07_A 468 KPSIS-SNNSKPVEDKDAVAFTCEPEA-QNTTYLWWVNGQSLPVSPRLQLS--NGNRTLTLFNVTRNDARAYVCGIQNSV 543 (642)
T ss_pred CceEe-cCCceeecCCCeEEEEEECCC-CCcEEEEEECCEeCCCCCcEEEc--CCCcEEEEeecChhcCceEEEEeEcCC
Confidence 34443 345567889999999999984 78899999999999876665543 34578999999999999999999999
Q ss_pred CCceE-EEEEEEEEecCCC----------------------CCCCCCCCCeEEecC------CEEEE----eccCCeeEE
Q psy8425 89 HKDVV-SAFAEVSINLRPD----------------------NMGGPCPLDSYCLNG------GSCTY----YDTVGELVC 135 (176)
Q Consensus 89 g~~~~-s~~~~l~V~~~p~----------------------~~g~p~p~~~~~~~~------~~~~i----~~d~g~y~C 135 (176)
|.... . +.|.|..+|. +.|.|.|...|..+| ..|.| .+|.|.|.|
T Consensus 544 g~~~s~~--~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~~~~L~i~~~~~~d~G~Y~C 621 (642)
T 1e07_A 544 SANRSDP--VTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHTQVLFIAKITPNNNGTYAC 621 (642)
T ss_pred CCccCCC--EEEEEEeCCCcceecCCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECccCceEEECcccccCCeEEEE
Confidence 65432 4 7788876543 456676644554443 34566 689999999
Q ss_pred EecCCcccCc
Q psy8425 136 QCAEGYKGQR 145 (176)
Q Consensus 136 ~~~~n~~g~~ 145 (176)
. |.|..|..
T Consensus 622 ~-a~N~~G~~ 630 (642)
T 1e07_A 622 F-VSNLATGR 630 (642)
T ss_pred E-EEecccCc
Confidence 9 99999864
No 125
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.66 E-value=7.5e-16 Score=96.93 Aligned_cols=92 Identities=20% Similarity=0.294 Sum_probs=76.8
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
..+|.|...+.++.+.+|+++.|.|.+.+. |.+.|+|++..+..+.++.+........|.|.+++.+|+|.|+|.+.|
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 83 (108)
T 2dm7_A 6 SGPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCGQ 83 (108)
T ss_dssp CCCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEETT
T ss_pred CCCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEEcC
Confidence 467888888889999999999999998765 789999999998877777776656667899999999999999999955
Q ss_pred CCCceEEEEEEEEEecCCC
Q psy8425 88 VHKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 88 ~g~~~~s~~~~l~V~~~p~ 106 (176)
...+ +.|.|..+|.
T Consensus 84 ---~~~~--~~l~V~~~p~ 97 (108)
T 2dm7_A 84 ---ERTS--ATLTVRALPA 97 (108)
T ss_dssp ---EEEE--EECEEECCCS
T ss_pred ---CEEE--EEEEEecCCH
Confidence 2444 7888887554
No 126
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.66 E-value=1.3e-15 Score=106.45 Aligned_cols=90 Identities=19% Similarity=0.235 Sum_probs=66.1
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--EEe------------ccCcceEEEEecceEEEEEcccCCCCC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--VEI------------TTNKRLKIQFKKKRSTLIITRIRSEDA 78 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~~l------------~~~~~~~~~~~~~~~~L~i~~v~~~d~ 78 (176)
+...+..+.+.+|+++.|.|.+.+.|.+.+.|+|++ ..+ ....++.+.......+|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhC
Confidence 455577888999999999999999998999999843 211 112455554445667999999999999
Q ss_pred EEEEEEEEcC-CCceEEEEEEEEEec
Q psy8425 79 GRYECRGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 79 G~Y~C~a~n~-g~~~~s~~~~l~V~~ 103 (176)
|.|.|.+.|. +..... .+.|.|..
T Consensus 84 G~Y~C~~~~~~~~~~~~-~~~l~V~~ 108 (213)
T 3d9a_L 84 GMYFCQQSNSWPYTFGG-GTKLEIKR 108 (213)
T ss_dssp EEEEEEECSSSSCEECC-CEEEEECC
T ss_pred EEEEEeeecCCcceeCC-CEEEEEec
Confidence 9999999998 432221 14566654
No 127
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.66 E-value=1.2e-16 Score=110.41 Aligned_cols=132 Identities=20% Similarity=0.318 Sum_probs=89.2
Q ss_pred EEeCCceeEEecCCcEEEEEE-EeecCC-CeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-C
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCR-CKGNPL-PAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-H 89 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~-~~g~p~-p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g 89 (176)
....+..+.+.+|+.+.|.|. +.+.|. +.+.|++++..+...............+|.|.+++.+|+|.|+|.+.|. +
T Consensus 11 ~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 90 (201)
T 3s97_C 11 PPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSI 90 (201)
T ss_dssp CSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGG
T ss_pred CcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCC
Confidence 344567789999999999999 889999 9999999998775322212222245678999999999999999999996 4
Q ss_pred CceE-EEEEEEEEec-------CC-------C--------------CCCCCCCCCeE-------------EecCCEEEE-
Q psy8425 90 KDVV-SAFAEVSINL-------RP-------D--------------NMGGPCPLDSY-------------CLNGGSCTY- 126 (176)
Q Consensus 90 ~~~~-s~~~~l~V~~-------~p-------~--------------~~g~p~p~~~~-------------~~~~~~~~i- 126 (176)
.... ...+.+.+.. +| . +.|.|.|...+ ...++.+.|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~L~i~ 170 (201)
T 3s97_C 91 TKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIF 170 (201)
T ss_dssp TEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEETTTTEEEEC
T ss_pred CcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceeecCCCCEEEEc
Confidence 3332 1112222211 11 1 23444442222 234567777
Q ss_pred ---eccCCeeEEEecCCcccCc
Q psy8425 127 ---YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 127 ---~~d~g~y~C~~~~n~~g~~ 145 (176)
.+|.|.|.|. +.|..|..
T Consensus 171 ~v~~~d~G~Y~C~-a~n~~g~~ 191 (201)
T 3s97_C 171 NIQLEDEGIYECE-AENIRGKD 191 (201)
T ss_dssp SCCGGGCEEEEEE-EEETTEEE
T ss_pred cCChhhCEEEEEE-EEecCCce
Confidence 6899999999 88888864
No 128
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.66 E-value=1.1e-16 Score=119.05 Aligned_cols=125 Identities=22% Similarity=0.436 Sum_probs=92.3
Q ss_pred eeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcce-EEEEecceEEEEEcccCCCCCEEEEEEEEcC-CCceEEEE
Q psy8425 19 NVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRL-KIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HKDVVSAF 96 (176)
Q Consensus 19 ~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~s~~ 96 (176)
...+.+|+.+.|.|.+.|.|.|.+.|++++..+....+. .........+|.|.+++.+|+|.|+|.+.|. +.....
T Consensus 132 ~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~-- 209 (334)
T 1ry7_B 132 LLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQT-- 209 (334)
T ss_dssp EEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEE--
T ss_pred eEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEE--
Confidence 467889999999999999999999999999888754332 1111234568999999999999999999999 666555
Q ss_pred EEEEEecC----CC----------------------CCCCCCCCCeEEe----cC-------------------------
Q psy8425 97 AEVSINLR----PD----------------------NMGGPCPLDSYCL----NG------------------------- 121 (176)
Q Consensus 97 ~~l~V~~~----p~----------------------~~g~p~p~~~~~~----~~------------------------- 121 (176)
+.|.|... |. +.|.|.|...|.. +|
T Consensus 210 ~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (334)
T 1ry7_B 210 YTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKE 289 (334)
T ss_dssp EEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTT
T ss_pred EEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCcccccccc
Confidence 78888752 11 3355544333333 11
Q ss_pred -CEEEE----eccCCeeEEEecCCcccCcC
Q psy8425 122 -GSCTY----YDTVGELVCQCAEGYKGQRC 146 (176)
Q Consensus 122 -~~~~i----~~d~g~y~C~~~~n~~g~~c 146 (176)
..|.| .+|+|.|.|. |.|..|..-
T Consensus 290 ~~~L~i~~v~~~d~G~Y~C~-a~N~~G~~~ 318 (334)
T 1ry7_B 290 LEVLSLHNVTFEDAGEYTCL-AGNSIGFSH 318 (334)
T ss_dssp CCCEEECSCCTTSCSEEEEE-EEESSCCEE
T ss_pred ccEEEEccCCHHHCEEEEEE-EeCCCCeEE
Confidence 15777 5799999999 999999754
No 129
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.66 E-value=1.5e-17 Score=125.01 Aligned_cols=134 Identities=19% Similarity=0.232 Sum_probs=99.5
Q ss_pred ccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCE-EEEEEE
Q psy8425 7 ATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAG-RYECRG 85 (176)
Q Consensus 7 v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~a 85 (176)
+-.+|.+...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++..+....... .....++|.|.++..+|+| .|+|.|
T Consensus 155 ~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~--~~~~~~~L~i~~v~~~D~G~~Y~C~a 232 (347)
T 2ifg_A 155 SCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKS--GGLPSLGLTLANVTSDLNRKNVTCWA 232 (347)
T ss_dssp TCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCC--CCSSEEEEEEESCCSTTTTCCEEECC
T ss_pred cCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccc--eecccceEEEeeCChHHCCCeEEEEE
Confidence 3458888888888899999999999999999999999999886654321110 1146689999999999999 999999
Q ss_pred EcC-CCceEEEEEEEEEecCCC-----------------CCCCCCCCCeEEec------------------------CCE
Q psy8425 86 TGV-HKDVVSAFAEVSINLRPD-----------------NMGGPCPLDSYCLN------------------------GGS 123 (176)
Q Consensus 86 ~n~-g~~~~s~~~~l~V~~~p~-----------------~~g~p~p~~~~~~~------------------------~~~ 123 (176)
.|. |....+ +.|.|..+|. +.|.|.|...|..+ ++.
T Consensus 233 ~n~~g~~~~~--~~l~V~~~P~i~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~ 310 (347)
T 2ifg_A 233 ENDVGRAEVS--VQVNVSFPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGC 310 (347)
T ss_dssp EETTEECCEE--ECCCCBEEEEEEECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEE
T ss_pred EcCCCCEEEE--EEEEEcCCCeeeeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceE
Confidence 998 666555 6666655443 34556552222211 334
Q ss_pred EEE----eccCCeeEEEecCCcccCc
Q psy8425 124 CTY----YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 124 ~~i----~~d~g~y~C~~~~n~~g~~ 145 (176)
+.| .+|+|.|+|. |.|..|..
T Consensus 311 L~I~~v~~~d~G~Y~C~-a~N~~G~~ 335 (347)
T 2ifg_A 311 LRLNQPTHVNNGNYTLL-AANPFGQA 335 (347)
T ss_dssp EEESSCCGGGCEEEEEE-EEETTEEE
T ss_pred EEECCCCcccCceEEEE-EecCCCce
Confidence 666 6899999999 99999964
No 130
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.66 E-value=1.4e-15 Score=125.58 Aligned_cols=135 Identities=23% Similarity=0.332 Sum_probs=103.5
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEe-----cceEEEEEcccCCCCCEEEE
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFK-----KKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~-----~~~~~L~i~~v~~~d~G~Y~ 82 (176)
..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+....++..... .....|.|.++..+|+|.|+
T Consensus 427 ~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 506 (816)
T 3dmk_A 427 FDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYK 506 (816)
T ss_dssp SCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEE
T ss_pred cCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEE
Confidence 3578887777788899999999999999999999999999999987666544221 12357999999999999999
Q ss_pred EEEEcC-CCceEEEEEEEEEecCCC--------------------CCCCCCCC--------------CeEEecCCEEEE-
Q psy8425 83 CRGTGV-HKDVVSAFAEVSINLRPD--------------------NMGGPCPL--------------DSYCLNGGSCTY- 126 (176)
Q Consensus 83 C~a~n~-g~~~~s~~~~l~V~~~p~--------------------~~g~p~p~--------------~~~~~~~~~~~i- 126 (176)
|.|.|. |....+ +.|.|..+|. ..|.|.|. ......++++.|
T Consensus 507 C~a~n~~g~~~~~--~~l~V~~~p~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~l~i~ 584 (816)
T 3dmk_A 507 CIAKSKVGVAEHS--AKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIE 584 (816)
T ss_dssp EEEEETTEEEEEE--EEEEECSSCEECCCCCEEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEECTTSEEEES
T ss_pred EEEEECCCeEEEE--EEEEEecCCeeEccCCeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEEecCCeEEEE
Confidence 999999 777666 8888887663 22333321 112335677777
Q ss_pred ----eccCCeeEEEecCCcccCc
Q psy8425 127 ----YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 127 ----~~d~g~y~C~~~~n~~g~~ 145 (176)
.+|.|.|.|. |.|..|..
T Consensus 585 ~v~~~~d~G~Y~C~-a~n~~g~~ 606 (816)
T 3dmk_A 585 NVERNSDQATYTCV-AKNQEGYS 606 (816)
T ss_dssp SCCHHHHCEEEEEE-EEESSSCE
T ss_pred ecCccccCEEEEEE-EEECCCce
Confidence 2689999999 88988854
No 131
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.65 E-value=1.4e-16 Score=117.74 Aligned_cols=141 Identities=15% Similarity=0.242 Sum_probs=98.1
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEe-ecCCCeeEEEeCCEEeccCcceEEEEe---cceEEEEEcccCCCCCE
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCK-GNPLPAVSWFKDNVEITTNKRLKIQFK---KKRSTLIITRIRSEDAG 79 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~-g~p~p~i~W~~~g~~l~~~~~~~~~~~---~~~~~L~i~~v~~~d~G 79 (176)
.|.+..+|.+........+..|+.+.+.|.+. +.|.|.+.|++++..+........... ...+.|.|.....+|.|
T Consensus 111 ~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g 190 (313)
T 4fqp_A 111 WLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGK 190 (313)
T ss_dssp EECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTC
T ss_pred eeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccceeeeecccccccceeeeecccccccCe
Confidence 35566778777666666778889999999864 789999999999877654221111000 11246899999999999
Q ss_pred EEEEEEEcC-CCceEEEEEEEEEecCCC----------------------CCCCCCCC-CeEE-----------ecCCEE
Q psy8425 80 RYECRGTGV-HKDVVSAFAEVSINLRPD----------------------NMGGPCPL-DSYC-----------LNGGSC 124 (176)
Q Consensus 80 ~Y~C~a~n~-g~~~~s~~~~l~V~~~p~----------------------~~g~p~p~-~~~~-----------~~~~~~ 124 (176)
.|+|.|.|. +....+..+.|.|..+|. +.|+|.|. ..|. ..+++|
T Consensus 191 ~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~~~~~~~L 270 (313)
T 4fqp_A 191 NVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFAVAQGAQL 270 (313)
T ss_dssp EEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTEE
T ss_pred eEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCceEEeCCEE
Confidence 999999998 555444335666655443 34566652 2333 345677
Q ss_pred EE----eccCCeeEEEecCCcccCc
Q psy8425 125 TY----YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 125 ~i----~~d~g~y~C~~~~n~~g~~ 145 (176)
.| .+|+|.|.|. |.|..|..
T Consensus 271 ~i~~v~~~d~G~Y~C~-a~N~~G~~ 294 (313)
T 4fqp_A 271 LIRPVDKPINTTLICN-VTNALGAR 294 (313)
T ss_dssp EECCCSSCCEEEEEEE-EECSSCEE
T ss_pred EECcCChhhCEEEEEE-EEeCCCcE
Confidence 77 6899999999 99999965
No 132
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.65 E-value=1.4e-15 Score=104.61 Aligned_cols=92 Identities=26% Similarity=0.452 Sum_probs=79.0
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
.+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+....++.+.......+|.|.++..+|+|.|+|.|.|.
T Consensus 102 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 181 (194)
T 2a38_A 102 APPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNS 181 (194)
T ss_dssp EEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEET
T ss_pred CCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeC
Confidence 56777777778889999999999999999999999999999998877777665566668999999999999999999999
Q ss_pred -CCceEEEEEEEEEe
Q psy8425 89 -HKDVVSAFAEVSIN 102 (176)
Q Consensus 89 -g~~~~s~~~~l~V~ 102 (176)
|....+ +.|.|+
T Consensus 182 ~g~~~~~--~~l~V~ 194 (194)
T 2a38_A 182 VGRATST--AELLVQ 194 (194)
T ss_dssp TEEEEEE--EEEEEC
T ss_pred CCceEEE--EEEEEC
Confidence 776666 777663
No 133
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.65 E-value=3.8e-16 Score=105.54 Aligned_cols=120 Identities=15% Similarity=0.244 Sum_probs=86.0
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecC-CCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNP-LPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p-~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
+|.+...+....+.+|+.+.|.|.+.+.| .+.+.|+++|..+.... ..+.|.+++.+|+|.|+|.+.|.
T Consensus 4 ~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~----------~~~~~~~~~~~d~G~Y~C~~~~~ 73 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHT----------QPSYRFKANNNDSGEYTCQTGQT 73 (170)
T ss_dssp BCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCC----------SSEEEEECCGGGCEEEEEEETTS
T ss_pred CCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCc----------cceEEEecccccCeEEEEEEeCC
Confidence 46666677777899999999999999887 56899999999887632 34667789999999999999986
Q ss_pred -CCceEEEEEEEEEecCCC--------------------C-CCCCCCCCeEEec---------CCEEEE----eccCCee
Q psy8425 89 -HKDVVSAFAEVSINLRPD--------------------N-MGGPCPLDSYCLN---------GGSCTY----YDTVGEL 133 (176)
Q Consensus 89 -g~~~~s~~~~l~V~~~p~--------------------~-~g~p~p~~~~~~~---------~~~~~i----~~d~g~y 133 (176)
... . +.|.|..+|. + .+.|.+...+..+ ++.+.| .+|.|.|
T Consensus 74 ~~s~--~--~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G~Y 149 (170)
T 3ry4_A 74 SLSD--P--VHLTVLFEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTFSIPQANHSHSGDY 149 (170)
T ss_dssp BCCC--C--EEEEEECCSEEEECSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEESSCCEEEESSCCGGGCEEE
T ss_pred CceE--e--EEEEEECCceEecCCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccccCCCCeEEEEeccccCCEEE
Confidence 433 3 5666665332 1 2223222233322 345555 6899999
Q ss_pred EEEecCCcccC
Q psy8425 134 VCQCAEGYKGQ 144 (176)
Q Consensus 134 ~C~~~~n~~g~ 144 (176)
.|. +.|..|.
T Consensus 150 ~C~-a~n~~g~ 159 (170)
T 3ry4_A 150 HCT-GNIGYTL 159 (170)
T ss_dssp EEE-EEETTEE
T ss_pred EEE-EEeCcCc
Confidence 999 8887774
No 134
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.65 E-value=2.6e-15 Score=104.46 Aligned_cols=136 Identities=16% Similarity=0.180 Sum_probs=88.8
Q ss_pred ceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEecc-------------------CcceEEEEecceEEEEEcccCCCCC
Q psy8425 18 RNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITT-------------------NKRLKIQFKKKRSTLIITRIRSEDA 78 (176)
Q Consensus 18 ~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~-------------------~~~~~~~~~~~~~~L~i~~v~~~d~ 78 (176)
....+.+|+++.|.|...+.+.+.+.|++++..... ..+..+ ..+.+|.|.+++.+|+
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~---~~~~~L~i~~v~~~D~ 83 (208)
T 3r4d_A 7 VPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREII---YSNGSLLFQMITMKDM 83 (208)
T ss_dssp ESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEE---CTTSCEEECSCCGGGC
T ss_pred ccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEE---ecCCeEEEccccccCC
Confidence 346788999999999988888899999997542221 111111 2345799999999999
Q ss_pred EEEEEEEEcCCCceEEEEEEEEEecCCC----------------------CCCCCCCCCeEEe---------------cC
Q psy8425 79 GRYECRGTGVHKDVVSAFAEVSINLRPD----------------------NMGGPCPLDSYCL---------------NG 121 (176)
Q Consensus 79 G~Y~C~a~n~g~~~~s~~~~l~V~~~p~----------------------~~g~p~p~~~~~~---------------~~ 121 (176)
|.|+|.+.+......+..+.|.|..++. +.|.| |...+.. ++
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~~~~ 162 (208)
T 3r4d_A 84 GVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLSQNN 162 (208)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSSCCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEETTT
T ss_pred eEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCceEeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEcCCC
Confidence 9999999998222333337788876532 33333 3222221 33
Q ss_pred CEEEE----eccCCeeEEEecCCcccCcCcccccccccccccc
Q psy8425 122 GSCTY----YDTVGELVCQCAEGYKGQRCESKDVYNRSSMYKP 160 (176)
Q Consensus 122 ~~~~i----~~d~g~y~C~~~~n~~g~~c~~~~~~~~~~~~~p 160 (176)
+.|.| .+|.|.|.|. +.|..|..- +.++.+....+|
T Consensus 163 ~~L~i~~v~~~d~G~Y~C~-a~N~~g~~~--s~~~~l~v~~~~ 202 (208)
T 3r4d_A 163 SILRIDPIKREDAGEYQCE-ISNPVSVRR--SNSIKLDIIFDP 202 (208)
T ss_dssp TEEEESSCCGGGCEEEEEE-EECTTCCEE--CCCEEECCC---
T ss_pred CEEEEeccCHHhCeEEEEE-EecCCCccc--CCceeeeEEeCC
Confidence 66777 6899999999 999998753 334444334443
No 135
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.65 E-value=5.1e-16 Score=114.21 Aligned_cols=79 Identities=14% Similarity=0.204 Sum_probs=65.2
Q ss_pred CCeEEeCC-ceeEEecCCcEEEEEEEe-ecCCCeeEEEeCCEEeccCcceEEEEe--cceEEEEEcccCCCCCEEEEEEE
Q psy8425 10 HPIEVSGL-RNVSVKLRQSLRLVCRCK-GNPLPAVSWFKDNVEITTNKRLKIQFK--KKRSTLIITRIRSEDAGRYECRG 85 (176)
Q Consensus 10 ~p~~~~~~-~~~~v~~G~~~~l~C~~~-g~p~p~i~W~~~g~~l~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a 85 (176)
+|.+...+ ....+.+|+.+.|.|.+. +.|.+.+.|++++..+....++.+... ....+|.|.++..+|+|.|+|.+
T Consensus 106 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 185 (312)
T 2y23_A 106 FPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQL 185 (312)
T ss_dssp SCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEE
T ss_pred CCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEE
Confidence 55544333 377899999999999998 899999999999999988777766554 34566999999999999999999
Q ss_pred EcC
Q psy8425 86 TGV 88 (176)
Q Consensus 86 ~n~ 88 (176)
.+.
T Consensus 186 ~~~ 188 (312)
T 2y23_A 186 QDG 188 (312)
T ss_dssp ESS
T ss_pred EeC
Confidence 875
No 136
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.65 E-value=1.2e-15 Score=109.52 Aligned_cols=131 Identities=17% Similarity=0.210 Sum_probs=92.3
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEE-eecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEE
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRC-KGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~-~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 82 (176)
.|.|..++.+. .+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... .....|.|.+++.+|+|.|+
T Consensus 77 ~l~v~~~~~~~-~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~--------~~~~~l~i~~~~~~d~G~Y~ 147 (262)
T 3rjd_A 77 QLEIHRGWLLL-QVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF--------HWNSNLTILKTNISHNGTYH 147 (262)
T ss_dssp EEEEECSSEEE-EESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE--------EECCCEEESSCCGGGCEEEE
T ss_pred EEEEeccceEe-cCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc--------CCCCeEEEEECChhhCEEEE
Confidence 34555555443 3445678899999999999 67788899999999887542 23467999999999999999
Q ss_pred EEEEcC-CCceEEEEEEEEEecC---CC--------------------CCCCCC-CCC----eEEec---------CCEE
Q psy8425 83 CRGTGV-HKDVVSAFAEVSINLR---PD--------------------NMGGPC-PLD----SYCLN---------GGSC 124 (176)
Q Consensus 83 C~a~n~-g~~~~s~~~~l~V~~~---p~--------------------~~g~p~-p~~----~~~~~---------~~~~ 124 (176)
|.+.|. +..... +.|.|... |. +.|.|. |.. .+..+ ++.+
T Consensus 148 C~~~n~~~~~~~~--~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~~~~~~L 225 (262)
T 3rjd_A 148 CSGMGKHRYTSAG--ISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRNTSSEY 225 (262)
T ss_dssp EEEESSSEEEEEC--EEEEEECSSCCCEEEESSCSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEEESCCEE
T ss_pred EEEeCCCCccccc--eEEEeccCCCCCeEeecCceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEecccCCCceE
Confidence 999998 554444 77888753 21 456654 321 12222 2345
Q ss_pred EE----eccCCeeEEEecCCcccCcC
Q psy8425 125 TY----YDTVGELVCQCAEGYKGQRC 146 (176)
Q Consensus 125 ~i----~~d~g~y~C~~~~n~~g~~c 146 (176)
.| .+|+|.|.|. |.|..|..-
T Consensus 226 ~i~~v~~~d~G~Y~C~-a~n~~G~~~ 250 (262)
T 3rjd_A 226 QILTARREDSGLYWCE-AATEDGNVL 250 (262)
T ss_dssp EESSCCGGGCEEEEEE-EEETTSSCE
T ss_pred EEEEechhhCeEEEEE-EEcccCceE
Confidence 55 6899999999 999999643
No 137
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.65 E-value=2.5e-15 Score=104.89 Aligned_cols=82 Identities=22% Similarity=0.306 Sum_probs=62.7
Q ss_pred eeEEecCCcEEEEEEEeecCCCeeEEEeCC-EEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CCceEEEE
Q psy8425 19 NVSVKLRQSLRLVCRCKGNPLPAVSWFKDN-VEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HKDVVSAF 96 (176)
Q Consensus 19 ~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g-~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~s~~ 96 (176)
.+.+.+|+++.|.|.+.|.|.|.+.|+++. .++.. ..........|.|.+++.+|+|.|.|.|.|. +.....
T Consensus 10 ~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~~----~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~-- 83 (202)
T 1vca_A 10 RYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNG----KVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKG-- 83 (202)
T ss_dssp EEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCSS----EEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEE--
T ss_pred cEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCccc----eEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeE--
Confidence 345569999999999999999999999842 22211 1222245678999999999999999999998 655445
Q ss_pred EEEEEecCCC
Q psy8425 97 AEVSINLRPD 106 (176)
Q Consensus 97 ~~l~V~~~p~ 106 (176)
+.|.|..+|.
T Consensus 84 ~~l~V~~~p~ 93 (202)
T 1vca_A 84 IQVEIYSFPK 93 (202)
T ss_dssp EEEEEEBCCS
T ss_pred EEEEEEeCCC
Confidence 8899987664
No 138
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.65 E-value=5.6e-16 Score=112.92 Aligned_cols=139 Identities=15% Similarity=0.111 Sum_probs=97.9
Q ss_pred CccccCCCe-EEeCCceeEEecCCcEEEEEEEeecCCCe-eEEEe-CCEEeccCcceEEEEecceEEEEEcccCCCCCEE
Q psy8425 4 GLRATIHPI-EVSGLRNVSVKLRQSLRLVCRCKGNPLPA-VSWFK-DNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 4 ~l~v~~~p~-~~~~~~~~~v~~G~~~~l~C~~~g~p~p~-i~W~~-~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 80 (176)
.|.|..+|. +...+....+.+|+.+.|.|.+.+.+.+. +.|++ ++..+....++.+ .....|.|.++..+|+|.
T Consensus 82 ~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~ 158 (289)
T 3ejj_X 82 HLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFF---SPWRGFIIRKAKVLDSNT 158 (289)
T ss_dssp EEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEE---ETTTEEEESSCCGGGCEE
T ss_pred EEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEE---CCCCCEEEeecccccCEE
Confidence 345555555 56667888999999999999999887775 99986 7777766555444 344579999999999999
Q ss_pred EEEEEEcC--CCceEEEEEEEEEe----cCCC---------------------CCC-CCCCCCeEEec------------
Q psy8425 81 YECRGTGV--HKDVVSAFAEVSIN----LRPD---------------------NMG-GPCPLDSYCLN------------ 120 (176)
Q Consensus 81 Y~C~a~n~--g~~~~s~~~~l~V~----~~p~---------------------~~g-~p~p~~~~~~~------------ 120 (176)
|+|.+.+. +..... +.|.|. .+|. ..| .|.|...+..+
T Consensus 159 Y~C~a~~~~~~~~~~~--~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~ 236 (289)
T 3ejj_X 159 YVCKTMVNGRESTSTG--IWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDF 236 (289)
T ss_dssp EEEEEEETTEEEECCC--EEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEE
T ss_pred EEEEEEeCCCcccccc--EEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCccc
Confidence 99999954 433344 778887 3333 223 34442223222
Q ss_pred -------CCEEEE----eccCCeeEEEecCCcccCcCcc
Q psy8425 121 -------GGSCTY----YDTVGELVCQCAEGYKGQRCES 148 (176)
Q Consensus 121 -------~~~~~i----~~d~g~y~C~~~~n~~g~~c~~ 148 (176)
++.|.| .+|.|.|.|. |.|..|..-..
T Consensus 237 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~-a~N~~G~~~~s 274 (289)
T 3ejj_X 237 QDNYYKKVRALSLNAVDFQDAGIYSCV-ASNDVGTRTAT 274 (289)
T ss_dssp CSSSEEEEEEEEESSCCSSSCEEEEEE-EECSSCEEEEE
T ss_pred ccceEEeeEEEEEEeecccCCEEEEEE-EEcCCCCcccc
Confidence 345555 6899999999 99999976543
No 139
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.65 E-value=1.5e-15 Score=107.35 Aligned_cols=128 Identities=13% Similarity=0.176 Sum_probs=77.7
Q ss_pred eCCceeEEecCCcEEEEEEEeecCCC---eeEEEeCCEE-----------eccC------cceEEEE---ecceEEEEEc
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGNPLP---AVSWFKDNVE-----------ITTN------KRLKIQF---KKKRSTLIIT 71 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~p~p---~i~W~~~g~~-----------l~~~------~~~~~~~---~~~~~~L~i~ 71 (176)
.+.+.+.+.+|++++|.|.+.+.+.+ .+.|+|++.. +... .+..... ..++.+|.|.
T Consensus 9 ~P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~ 88 (226)
T 4f80_A 9 GPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIH 88 (226)
T ss_dssp CCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEES
T ss_pred CCCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEe
Confidence 34456789999999999999876655 6899986532 1110 1111111 1245789999
Q ss_pred ccCCCCCEEEEEEEEcC-CCceEEEEEEEEEecCCC-------------------CCC-CCCCCCeEEe-----------
Q psy8425 72 RIRSEDAGRYECRGTGV-HKDVVSAFAEVSINLRPD-------------------NMG-GPCPLDSYCL----------- 119 (176)
Q Consensus 72 ~v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p~-------------------~~g-~p~p~~~~~~----------- 119 (176)
+++.+|+|.|.|.|.|. +..... +.+.+..++. +.| .|.|.-.|..
T Consensus 89 ~v~~~D~G~Y~C~a~n~~~~~~~~--v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~ 166 (226)
T 4f80_A 89 NVTASDSGKYLCYFQDGDFYEKAL--VELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEA 166 (226)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEE--EEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEEC
T ss_pred eCchHHCeeEEEEEECCCcEEEEE--EEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCce
Confidence 99999999999999998 554443 4454443322 333 3555222221
Q ss_pred -----cCCEEE------E-eccCCeeEEEecCCcccCc
Q psy8425 120 -----NGGSCT------Y-YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 120 -----~~~~~~------i-~~d~g~y~C~~~~n~~g~~ 145 (176)
.+|... + .+|.|.|+|. |.|..|..
T Consensus 167 ~~~~~~~g~~~v~s~l~v~~~d~G~YtC~-a~N~~g~~ 203 (226)
T 4f80_A 167 PVVADGVGLYAVAASVIMRGSSGEGVSCT-IRSSLLGL 203 (226)
T ss_dssp CCEECTTSCEEEEEEEEECC----CEEEE-EEETTTTE
T ss_pred EEEECCCCcEEEEEEEEechhcCcEEEEE-EEeCCCCe
Confidence 222211 1 4799999999 99988854
No 140
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.65 E-value=1.9e-15 Score=111.03 Aligned_cols=101 Identities=18% Similarity=0.279 Sum_probs=82.4
Q ss_pred CccccCCCeEEeC-----CceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcc-cCCCC
Q psy8425 4 GLRATIHPIEVSG-----LRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITR-IRSED 77 (176)
Q Consensus 4 ~l~v~~~p~~~~~-----~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~-v~~~d 77 (176)
.|.|..+|.+..+ +....+.+|+.+.|.|.+.|.|.|.+.|++++..+....++.+........|.|.+ +..+|
T Consensus 93 ~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d 172 (305)
T 2nzi_A 93 SLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKD 172 (305)
T ss_dssp EEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEEEEETTCCCSTT
T ss_pred EEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceEEEEecCCccCc
Confidence 3555555655332 35677889999999999999999999999999988877777766556678999999 99999
Q ss_pred CEEEEEEEEcC-CCceEEEEEEEEEecCCC
Q psy8425 78 AGRYECRGTGV-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 78 ~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p~ 106 (176)
+|.|+|.|.|. |....+ +.|.|..+|.
T Consensus 173 ~G~Y~C~a~N~~G~~~~~--~~l~v~~~P~ 200 (305)
T 2nzi_A 173 AGFYVVCAKNRFGIDQKT--VELDVADVPD 200 (305)
T ss_dssp CEEEEEEEEETTEEEEEE--EEEEEEBCCC
T ss_pred cEEEEEEEEeCCCceeeE--EEEEEecCCC
Confidence 99999999999 777666 8888887665
No 141
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.65 E-value=1.5e-15 Score=105.38 Aligned_cols=93 Identities=16% Similarity=0.152 Sum_probs=66.8
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
..+|.|...+. ..+.+|++++|.|.+.+.|. .+.|+|+|..+....+.. ........|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~-~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (198)
T 1ugn_A 3 LPKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIP-QELVKKGQFPIPSITWEHTGRYRCYYGS 79 (198)
T ss_dssp CCCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSC-HHHHTTTEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCcccccccccc-ccCCcccEEEECCCCHHHCeEEEEEEEC
Confidence 45788876666 47899999999999998775 699999998774211100 0013456899999999999999999998
Q ss_pred CC-C-ceEEEEEEEEEec
Q psy8425 88 VH-K-DVVSAFAEVSINL 103 (176)
Q Consensus 88 ~g-~-~~~s~~~~l~V~~ 103 (176)
.. + ...+..+.|.|..
T Consensus 80 ~~~g~~~~s~~~~l~V~~ 97 (198)
T 1ugn_A 80 DTAGRSESSDPLELVVTG 97 (198)
T ss_dssp TTTEECCCCCCEEEEEEC
T ss_pred CCCCcccCCccEEEEEcc
Confidence 63 2 1212227777776
No 142
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.64 E-value=6e-15 Score=102.79 Aligned_cols=92 Identities=20% Similarity=0.389 Sum_probs=77.3
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEe-cceEEEEEcccCCCCCEEEEEEEEcC-
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFK-KKRSTLIITRIRSEDAGRYECRGTGV- 88 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~- 88 (176)
+.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+....++.+... .....|.|.+++.+|+|.|+|.|.|.
T Consensus 118 ~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~ 197 (212)
T 2r15_A 118 RVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKY 197 (212)
T ss_dssp EEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred cccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCC
Confidence 3344456678899999999999999999999999999999988777776654 44579999999999999999999999
Q ss_pred CCceEEEEEEEEEecC
Q psy8425 89 HKDVVSAFAEVSINLR 104 (176)
Q Consensus 89 g~~~~s~~~~l~V~~~ 104 (176)
|....+ +.|.|..|
T Consensus 198 g~~~~~--~~l~V~~P 211 (212)
T 2r15_A 198 GSETSD--FTVSVFIP 211 (212)
T ss_dssp EEEEEE--EEEEEECC
T ss_pred CcEEEE--EEEEEEcc
Confidence 776666 88888753
No 143
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.64 E-value=2.7e-16 Score=117.73 Aligned_cols=83 Identities=13% Similarity=0.152 Sum_probs=63.4
Q ss_pred CceeEEecCCcEEEEEEE-----eecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CC
Q psy8425 17 LRNVSVKLRQSLRLVCRC-----KGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HK 90 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~-----~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~ 90 (176)
+....+.+|+.+.|.|.+ .|.|.|.+.|+|++..+....++. .....|.|.+++.+|+|.|+|.|.|. ++
T Consensus 127 ~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g 202 (349)
T 4dep_C 127 PVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVI----PEGMNLSFLIALISNNGNYTCVVTYPENG 202 (349)
T ss_dssp CEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSEE----EETTEEEEESCCGGGCEEEEEEEEEEETT
T ss_pred CcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCcccee----ecCCEEEEeeeeecCCcEEEEEEEEeeCC
Confidence 345678899999999985 778999999999999886533322 23357999999999999999999998 44
Q ss_pred ce--EEEEEEEEEec
Q psy8425 91 DV--VSAFAEVSINL 103 (176)
Q Consensus 91 ~~--~s~~~~l~V~~ 103 (176)
.. .+..+.|.|..
T Consensus 203 ~~~~~~~~~~l~v~~ 217 (349)
T 4dep_C 203 RTFHLTRTLTVKVVG 217 (349)
T ss_dssp EEEEEEEEEEEEEEC
T ss_pred EEEEEEEEEEEEEEc
Confidence 43 23236676654
No 144
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.64 E-value=7.4e-16 Score=108.07 Aligned_cols=87 Identities=28% Similarity=0.349 Sum_probs=71.8
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeec-CCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGN-PLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
+|.|...+ +..+.+|+.+.|.|.+.|. |.|.+.|+|+|.++..+.++. ......+|.|.++..+|+|.|+|.|.|.
T Consensus 117 ~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 193 (207)
T 3rbs_A 117 GPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHD--FKDGICTLLITEFSKKDAGIYEVILKDD 193 (207)
T ss_dssp SSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCCC--CSSEEEEEEETTCCGGGCEEEEEEEEET
T ss_pred CCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCceE--cCCCEEEEEECCCCcccCEEEEEEEEcC
Confidence 78887665 4788999999999999999 999999999999997755432 1234567999999999999999999999
Q ss_pred -CCceEEEEEEEEE
Q psy8425 89 -HKDVVSAFAEVSI 101 (176)
Q Consensus 89 -g~~~~s~~~~l~V 101 (176)
|....+ +.|.+
T Consensus 194 ~G~~~~~--~~L~~ 205 (207)
T 3rbs_A 194 RGKDKSR--LKLVD 205 (207)
T ss_dssp TEEEEEE--EEECC
T ss_pred CCEEEEE--EEEec
Confidence 777766 66654
No 145
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.64 E-value=2.5e-15 Score=103.58 Aligned_cols=92 Identities=12% Similarity=0.104 Sum_probs=65.4
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
.+|.+...+.. .+.+|++++|.|.+.+ +.+.+.|+|+|..+..... ..........|.|.+++.+|+|.|+|.+.|.
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 79 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSCIYRVG 79 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC-SSCTTCCEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEECCCccccccc-ccCCCcceeEEEeCcCCcccCeEEEEEecCC
Confidence 46777776666 7899999999999875 3468999999987652100 0001135678999999999999999999886
Q ss_pred -CCceEEEEEEEEEec
Q psy8425 89 -HKDVVSAFAEVSINL 103 (176)
Q Consensus 89 -g~~~~s~~~~l~V~~ 103 (176)
+....+..+.|.|..
T Consensus 80 ~~~~~~s~~~~l~V~~ 95 (188)
T 1oll_A 80 ELWSEPSNLLDLVVTE 95 (188)
T ss_dssp TEECCCCCCEEEEEES
T ss_pred CCCCCCCCceEEEecc
Confidence 433223226677653
No 146
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.64 E-value=4.3e-15 Score=93.41 Aligned_cols=94 Identities=14% Similarity=0.242 Sum_probs=71.1
Q ss_pred cccCCCeEEeCCceeEEecCCcEEEEEEEeecC--CCeeEEEeCCEEeccCcceEE-EEec-------ceEEEEEcccCC
Q psy8425 6 RATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDNVEITTNKRLKI-QFKK-------KRSTLIITRIRS 75 (176)
Q Consensus 6 ~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g~~l~~~~~~~~-~~~~-------~~~~L~i~~v~~ 75 (176)
....+|.+...+....+.+|+++.|.|.+.+.| .+.+.|+|++..+........ +... ...+|.|.+++.
T Consensus 6 ~~~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 85 (112)
T 3so5_A 6 DDFPXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEF 85 (112)
T ss_dssp --CCSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCG
T ss_pred CCCCCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEecccc
Confidence 345789999989889999999999999998654 579999999998875322111 1111 147899999999
Q ss_pred CCCEEEEEEEEcC-CCc-eEEEEEEEEE
Q psy8425 76 EDAGRYECRGTGV-HKD-VVSAFAEVSI 101 (176)
Q Consensus 76 ~d~G~Y~C~a~n~-g~~-~~s~~~~l~V 101 (176)
+|+|.|.|.|.|. |.. ... +.|.|
T Consensus 86 ~D~G~Y~C~a~n~~g~~~s~~--~~l~V 111 (112)
T 3so5_A 86 TSEGXYQCVISNHFGSSYSVX--AXLTI 111 (112)
T ss_dssp GGCEEEEEEEEETTEEEECCC--EEEEE
T ss_pred ccCCeEEEEEEeCCCcEEEeE--EEEEe
Confidence 9999999999998 552 344 66766
No 147
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.64 E-value=1.7e-15 Score=93.15 Aligned_cols=83 Identities=25% Similarity=0.348 Sum_probs=67.6
Q ss_pred eCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CCceE
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HKDVV 93 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~ 93 (176)
..+.+..+.+|+++.|.|.+.+ .|.+.|+|+|..+....++.+. ...|.|.+++.+|+|.|+|.|.|. |....
T Consensus 6 ~~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~ 79 (95)
T 4hwu_A 6 SQPEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVLI----GEYLQIKGATPRDSGLYACTAARTVDSETW 79 (95)
T ss_dssp --CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEEE----TTEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred cCCCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEEe----CCEEEECcCCcccCEEEEEEEccCCCcEEE
Confidence 4567788999999999999886 5799999999999876665442 358999999999999999999999 76666
Q ss_pred EEEEEEEEecCC
Q psy8425 94 SAFAEVSINLRP 105 (176)
Q Consensus 94 s~~~~l~V~~~p 105 (176)
. +.|.|..++
T Consensus 80 ~--~~l~V~~~~ 89 (95)
T 4hwu_A 80 I--FMVNVTDAA 89 (95)
T ss_dssp E--EEEEECCC-
T ss_pred E--EEEEEeCCc
Confidence 6 888887654
No 148
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.64 E-value=4.9e-16 Score=99.19 Aligned_cols=96 Identities=22% Similarity=0.406 Sum_probs=70.5
Q ss_pred cccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCc---ceEEEEecceEEEEEc-----ccCCCC
Q psy8425 6 RATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNK---RLKIQFKKKRSTLIIT-----RIRSED 77 (176)
Q Consensus 6 ~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~---~~~~~~~~~~~~L~i~-----~v~~~d 77 (176)
.+..+|.|...+..+.+.+|+.+.|.|.+.|.|.|.+.|+|++..+.... +..... ..++.+.+. +++.+|
T Consensus 5 ~~~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~v~~~D 83 (117)
T 2v9t_A 5 QEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRML-LPSGSLFFLRIVHGRKSRPD 83 (117)
T ss_dssp CCCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEE-CTTSCEEESSCCCBTTBCSS
T ss_pred cccCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEE-ecCCcEEEEEEEeCCCCcCc
Confidence 34578999988889999999999999999999999999999999887532 111111 122233333 557899
Q ss_pred CEEEEEEEEcC-CCceEEEEEEEEEec
Q psy8425 78 AGRYECRGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 78 ~G~Y~C~a~n~-g~~~~s~~~~l~V~~ 103 (176)
+|.|.|.|.|. |....+ .+.|.+..
T Consensus 84 ~G~Y~C~a~N~~G~~~s~-~~~l~~~~ 109 (117)
T 2v9t_A 84 EGVYVCVARNYLGEAVSH-DASLEVAA 109 (117)
T ss_dssp CEEEEEEEEETTEEEECC-CEEEEEC-
T ss_pred CEEEEEEEEeCccceEee-eEEEEhhh
Confidence 99999999999 654433 27777764
No 149
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.64 E-value=1.3e-15 Score=106.51 Aligned_cols=78 Identities=18% Similarity=0.299 Sum_probs=62.4
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--EE---ec---------cCcceEEEEecceEEEEEcccCCC
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--VE---IT---------TNKRLKIQFKKKRSTLIITRIRSE 76 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~~---l~---------~~~~~~~~~~~~~~~L~i~~v~~~ 76 (176)
|.+...+..+.+.+|++++|.|.+.+.|.+.+.|+|+. .. +. ...++.+.......+|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECA 81 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChH
Confidence 45666778889999999999999999999999999842 11 11 134565554456779999999999
Q ss_pred CCEEEEEEEEcC
Q psy8425 77 DAGRYECRGTGV 88 (176)
Q Consensus 77 d~G~Y~C~a~n~ 88 (176)
|+|.|.|.+.|.
T Consensus 82 D~G~Y~C~~~~~ 93 (213)
T 3nl4_L 82 DAATYYCQSTYE 93 (213)
T ss_dssp GCEEEEEEECCS
T ss_pred HCEEEEEecCCC
Confidence 999999999997
No 150
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.64 E-value=1.3e-15 Score=104.80 Aligned_cols=126 Identities=21% Similarity=0.281 Sum_probs=88.9
Q ss_pred CceeEEecCCcEEEEEEEe--ecCCCeeEEEe--CCEEe----------ccCcceEEEEecceEEEEEcccCCCCCEEEE
Q psy8425 17 LRNVSVKLRQSLRLVCRCK--GNPLPAVSWFK--DNVEI----------TTNKRLKIQFKKKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~--g~p~p~i~W~~--~g~~l----------~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 82 (176)
.+.+...+|++++|.|... +.+.+.+.|++ ++..+ ....|+.+ ..+++|.|.+++.+|+|.|+
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~---~~ngsL~I~~v~~~DsG~Y~ 82 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKL---FKNGTLKIKHLKTDDQDIYK 82 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEE---CTTSCEEECSCCGGGCEEEE
T ss_pred ccEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEE---CCCCCEEECCCChhhCEEEE
Confidence 4557788999999999542 34567899999 88776 23344444 34568999999999999999
Q ss_pred EEEEcC-CCceEEEEEEEEEecC---CC-------------CCCCCCCCCeEEecCCEE-------EE---eccCCeeEE
Q psy8425 83 CRGTGV-HKDVVSAFAEVSINLR---PD-------------NMGGPCPLDSYCLNGGSC-------TY---YDTVGELVC 135 (176)
Q Consensus 83 C~a~n~-g~~~~s~~~~l~V~~~---p~-------------~~g~p~p~~~~~~~~~~~-------~i---~~d~g~y~C 135 (176)
|.+.|. |.......+.|.|.++ |. +.+.|.|...|..+|..+ .+ .+|.|.|+|
T Consensus 83 c~~~n~~g~~~~~~~~~L~V~~~~~~P~i~~~~~~v~L~C~~~~~p~~~~~W~~~g~~l~~~~~~i~~~~~~~d~G~Y~C 162 (182)
T 1hnf_A 83 VSIYDTKGKNVLEKIFDLKIQERVSKPKISWTCINTTLTCEVMNGTDPELNLYQDGKHLKLSQRVITHKWTTSLSAKFKC 162 (182)
T ss_dssp EEEEETTSCEEEEEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEESSCEEEEESSCEEEECCSCEEEEEEE
T ss_pred EEEEeCCCceeEEEEEEEEEcCcCCCCEEEEccCcEEEEeEccCCCCCEEEEEECCEECCCCCcEEEEecccCCCcEEEE
Confidence 999998 6554333377888753 22 455565444555555432 22 478999999
Q ss_pred EecCCcccCcC
Q psy8425 136 QCAEGYKGQRC 146 (176)
Q Consensus 136 ~~~~n~~g~~c 146 (176)
. |.|..|..-
T Consensus 163 ~-a~N~~~~~~ 172 (182)
T 1hnf_A 163 T-AGNKVSKES 172 (182)
T ss_dssp E-EECSSCEEE
T ss_pred E-EEeCCCCcE
Confidence 9 999888654
No 151
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.64 E-value=1e-15 Score=104.27 Aligned_cols=122 Identities=13% Similarity=0.172 Sum_probs=85.8
Q ss_pred ceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccC--c--------ceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 18 RNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTN--K--------RLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 18 ~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~--~--------~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
+.+.+.+|++++|.|.+. .|.+.+.|++++..+..- . +-++.+...+++|.|.+++.+|+|.|.|.+.|
T Consensus 3 ~~v~~~~G~~VtL~c~~~-~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n 81 (171)
T 1ccz_A 3 QQIYGVVYGNVTFHVPSN-VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPN 81 (171)
T ss_dssp EEEEEETTCCEEECCCCS-SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTT
T ss_pred cEEEEEcCCCEEEcCCCC-CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeC
Confidence 346788999999999985 488899999988644210 0 00222323567899999999999999999998
Q ss_pred C-CCceEEEEEEEEEecCCC----------------CCCCCCCCCeEEecCCEE--------EE--eccCCeeEEEecCC
Q psy8425 88 V-HKDVVSAFAEVSINLRPD----------------NMGGPCPLDSYCLNGGSC--------TY--YDTVGELVCQCAEG 140 (176)
Q Consensus 88 ~-g~~~~s~~~~l~V~~~p~----------------~~g~p~p~~~~~~~~~~~--------~i--~~d~g~y~C~~~~n 140 (176)
. + ... +.|.|..++. +.|.|.|...+..++..+ .+ ..|.|.|+|. |.|
T Consensus 82 ~~~--~~~--~~L~V~~~~~~p~i~~~~~~~~L~C~~~~~p~p~i~W~~~~~~l~~~~~~~l~~~~~~~~g~Y~C~-a~N 156 (171)
T 1ccz_A 82 ITD--TMK--FFLYVLEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQWTNLRAPFKCK-AVN 156 (171)
T ss_dssp CCS--CEE--EEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESSSEEEEECSCCSSCEEEE-EEE
T ss_pred CCC--cEE--EEEEEECcCCCCEEEEecCCcEEEEEeCCCCCcEEEEEECCEECcCCcceEEEEeccCCCceEEEE-EEc
Confidence 8 5 445 7888877543 345565544555444332 22 3577899999 988
Q ss_pred cccCc
Q psy8425 141 YKGQR 145 (176)
Q Consensus 141 ~~g~~ 145 (176)
..|..
T Consensus 157 ~~~~~ 161 (171)
T 1ccz_A 157 RVSQE 161 (171)
T ss_dssp TTEEE
T ss_pred ccCcc
Confidence 88864
No 152
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.63 E-value=7.3e-15 Score=100.41 Aligned_cols=114 Identities=14% Similarity=0.255 Sum_probs=83.1
Q ss_pred eEEecCCcEEEEEEEeecCCC--eeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcCCCceEEEEE
Q psy8425 20 VSVKLRQSLRLVCRCKGNPLP--AVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGVHKDVVSAFA 97 (176)
Q Consensus 20 ~~v~~G~~~~l~C~~~g~p~p--~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~s~~~ 97 (176)
..+.+|+.+.|.|.+.+.|.| .+.|+|++..+...... .....|.|. +.+|+|.|+|.+.|.. ... +
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~-----~~~~~l~i~--~~~d~G~Y~C~~~n~~--~~~--~ 76 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP-----GQKTEFKVD--SDDQWGEYSCVFLPEP--MGT--A 76 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC-----CSEEEEEEC--GGGCCEEEEEEEESTT--SCE--E
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc-----CCcEEEEEe--chhhCeEEEEEEECCc--CcE--E
Confidence 467899999999999988877 89999999988764332 234466666 6899999999999842 234 7
Q ss_pred EEEEecCCC---------------------CCCCC-CCCCeEEe---cC--------------------CEEEE-----e
Q psy8425 98 EVSINLRPD---------------------NMGGP-CPLDSYCL---NG--------------------GSCTY-----Y 127 (176)
Q Consensus 98 ~l~V~~~p~---------------------~~g~p-~p~~~~~~---~~--------------------~~~~i-----~ 127 (176)
.|.|..+|. +.|.| .|...+.. ++ ..|.| .
T Consensus 77 ~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 156 (184)
T 3b5h_A 77 NIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNME 156 (184)
T ss_dssp EEEECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTT
T ss_pred EEEEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeecccc
Confidence 788887776 56677 44333333 11 14555 2
Q ss_pred ccCCeeEEEecCCcccCc
Q psy8425 128 DTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 128 ~d~g~y~C~~~~n~~g~~ 145 (176)
+|.|.|.|. |.|..|..
T Consensus 157 ~d~G~Y~C~-a~N~~g~~ 173 (184)
T 3b5h_A 157 ADPGQYRCN-GTSSKGSD 173 (184)
T ss_dssp TSSEEEEEE-EEETTEEE
T ss_pred ccCceEEEE-EEeCCCcc
Confidence 799999999 99988864
No 153
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=3.5e-16 Score=97.07 Aligned_cols=84 Identities=19% Similarity=0.392 Sum_probs=68.3
Q ss_pred CCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CCceEE
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HKDVVS 94 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~s 94 (176)
.+..+.+.+|+.+.|.|.+.+.| |.+.|+|++..+....++.+. ...|.|.++..+|+|.|+|.|.|. |.....
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 83 (99)
T 2cr3_A 9 EVESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRIT----GEEVEVQDSVPADSGLYACVTSSPSGSDTTY 83 (99)
T ss_dssp CEEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEEC----SSEEEETTCCTTTCEEEEEEEEETTEEEEEE
T ss_pred CCcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEE----CCEEEEccCCHHHCEEEEEEEEeCCceEEEE
Confidence 35566789999999999999877 799999999888766555442 468999999999999999999999 766555
Q ss_pred EEEEEEEecCCC
Q psy8425 95 AFAEVSINLRPD 106 (176)
Q Consensus 95 ~~~~l~V~~~p~ 106 (176)
+.|.|...|.
T Consensus 84 --~~l~V~~~~~ 93 (99)
T 2cr3_A 84 --FSVNVSDALP 93 (99)
T ss_dssp --EEECBCSCCS
T ss_pred --EEEEEecCCC
Confidence 7777776443
No 154
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.63 E-value=1e-15 Score=116.47 Aligned_cols=94 Identities=29% Similarity=0.462 Sum_probs=81.7
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEE
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 83 (176)
.|.|..+|.+...+.+..+.+|+.+.|.|.+.|.|.|.+.|+|+|..+....++.+ ..++|.|.++..+|+|.|+|
T Consensus 289 ~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C 364 (384)
T 3kld_A 289 QLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQI----EQGTLNITIVNLSDAGMYQC 364 (384)
T ss_dssp EEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEE----ETTEEEESSCCGGGCEEEEE
T ss_pred EEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEE----eCCEEEEeecChhhCEEEEE
Confidence 46677889998888889999999999999999999999999999999987666554 23589999999999999999
Q ss_pred EEEcC-CCceEEEEEEEEEec
Q psy8425 84 RGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 84 ~a~n~-g~~~~s~~~~l~V~~ 103 (176)
.|.|. |....+ +.|.|..
T Consensus 365 ~A~N~~G~~~~~--a~L~V~~ 383 (384)
T 3kld_A 365 VAENKHGVIFSS--AELSVIA 383 (384)
T ss_dssp EEEETTEEEEEE--EEEEEC-
T ss_pred EEEeCCceEEec--eEEEEec
Confidence 99999 877777 8888863
No 155
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.63 E-value=5.4e-15 Score=96.93 Aligned_cols=85 Identities=24% Similarity=0.423 Sum_probs=67.2
Q ss_pred ccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccC----------cceEEEEe---cceEEEEEccc
Q psy8425 7 ATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTN----------KRLKIQFK---KKRSTLIITRI 73 (176)
Q Consensus 7 v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~----------~~~~~~~~---~~~~~L~i~~v 73 (176)
...+|.|...+.++.+.+|+++.|.|.+.|.|.|.+.|++++..+... .+..+... ....+|.|.++
T Consensus 18 ~~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 97 (137)
T 3qr2_A 18 GSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTL 97 (137)
T ss_dssp ---CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSC
T ss_pred CCCCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCC
Confidence 346899999999999999999999999999999999999987655321 22222211 24578999999
Q ss_pred CCCCCEEEEEEEEcC-CCc
Q psy8425 74 RSEDAGRYECRGTGV-HKD 91 (176)
Q Consensus 74 ~~~d~G~Y~C~a~n~-g~~ 91 (176)
+.+|+|.|.|.|.|. |..
T Consensus 98 ~~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 98 VEEDTGTYECRASNDPDRN 116 (137)
T ss_dssp CGGGCEEEEEEEECCTTSS
T ss_pred CcccCEEEEEEEEecCCcc
Confidence 999999999999999 654
No 156
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.63 E-value=3e-15 Score=104.20 Aligned_cols=130 Identities=17% Similarity=0.236 Sum_probs=84.7
Q ss_pred eCCceeEEecCCcEEEEEEEeecCCCe---eEEEeCCEEeccCc------------------ceEEE---EecceEEEEE
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGNPLPA---VSWFKDNVEITTNK------------------RLKIQ---FKKKRSTLII 70 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~p~p~---i~W~~~g~~l~~~~------------------~~~~~---~~~~~~~L~i 70 (176)
..+..+.+.+|+++.|.|.+.+.|.+. +.|+|++..+.... +..+. ....+.+|.|
T Consensus 4 ~~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I 83 (218)
T 4frw_A 4 ETSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLL 83 (218)
T ss_dssp ECCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEE
T ss_pred eCCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEE
Confidence 456678899999999999999888764 88999765432210 00000 0022457999
Q ss_pred cccCCCCCEEEEEEEEcC-CCceEEEEEEEEEecCCC----------------------CCCCCCCCCeEEecC------
Q psy8425 71 TRIRSEDAGRYECRGTGV-HKDVVSAFAEVSINLRPD----------------------NMGGPCPLDSYCLNG------ 121 (176)
Q Consensus 71 ~~v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p~----------------------~~g~p~p~~~~~~~~------ 121 (176)
.+++.+|+|.|.|.+.+. +..... ...+.+..++. +.|.|.|...|..++
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~ 162 (218)
T 4frw_A 84 RNAVQADEGEYECRVSTFPAGSFQA-RLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSS 162 (218)
T ss_dssp SSCCGGGCEEEEEEEEEETTEEEEE-EEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEE
T ss_pred eeccHHHCCceeEEEEeccCceeee-EEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccC
Confidence 999999999999999887 433322 14444444332 345555532332221
Q ss_pred ------------CEEEE----eccCCeeEEEecCCcccCcC
Q psy8425 122 ------------GSCTY----YDTVGELVCQCAEGYKGQRC 146 (176)
Q Consensus 122 ------------~~~~i----~~d~g~y~C~~~~n~~g~~c 146 (176)
..|.| .+|.|.|+|. |.|..|..-
T Consensus 163 ~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~-a~N~~g~~~ 202 (218)
T 4frw_A 163 RSFKHSRSAAVTSEFHLVPSRSMNGQPLTCV-VSHPGLLQD 202 (218)
T ss_dssp EEEECSSSEEEEEEEEECCCGGGTTCEEEEE-EECTTCSSC
T ss_pred ceEecCCcEEEEEEEEEeeCCHHhCeEEEEE-EEeCCCCeE
Confidence 13555 6899999999 999988654
No 157
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.63 E-value=1.2e-15 Score=113.74 Aligned_cols=132 Identities=18% Similarity=0.297 Sum_probs=90.5
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecC-CCeeEEEeCCEEeccC-cceEEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNP-LPAVSWFKDNVEITTN-KRLKIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p-~p~i~W~~~g~~l~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
.+|.+........+.+|+.+.|.|.+.|.| .|.+.|+|++..+... .++.. .+..|.|.++..+|+|.|+|.|.
T Consensus 127 ~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~----~~~~L~I~~v~~~D~G~Y~C~a~ 202 (329)
T 3oq3_B 127 KPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQ----SGQNLIIHNPELEDSGRYDCYVH 202 (329)
T ss_dssp CCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEE----ETTEEEECSCCGGGCEEEEEEEE
T ss_pred CCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEec----CCCEEEEeecChhhCEEEEEEEE
Confidence 445544433344467799999999999999 8999999999998642 33222 14789999999999999999999
Q ss_pred cC---CCce--EEEEEEEEEecCCC------------------------CCCCC---CC-CCeEEecC------------
Q psy8425 87 GV---HKDV--VSAFAEVSINLRPD------------------------NMGGP---CP-LDSYCLNG------------ 121 (176)
Q Consensus 87 n~---g~~~--~s~~~~l~V~~~p~------------------------~~g~p---~p-~~~~~~~~------------ 121 (176)
|. +... .+..+.|.|..+|. +.|.| .| ...|..++
T Consensus 203 n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~ 282 (329)
T 3oq3_B 203 YDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYS 282 (329)
T ss_dssp ECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEE
T ss_pred ecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceee
Confidence 74 2222 22226677776551 34444 33 11333332
Q ss_pred ----------CEEEE----eccCC-eeEEEecCCcccCc
Q psy8425 122 ----------GSCTY----YDTVG-ELVCQCAEGYKGQR 145 (176)
Q Consensus 122 ----------~~~~i----~~d~g-~y~C~~~~n~~g~~ 145 (176)
+.|.| .+|.| .|+|. |.|..|..
T Consensus 283 ~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~-a~N~~G~~ 320 (329)
T 3oq3_B 283 ILTSSGGITEATLYFENVTEEYIGNTYTCR-GHNYYFDK 320 (329)
T ss_dssp EEEEETTEEEEEEEESSCCGGGTTCEEEEE-EECSSCEE
T ss_pred eecccCceeEeEEEEEeccHHHCCCcEEEE-EEecCCce
Confidence 33555 68999 99999 99988864
No 158
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.63 E-value=6.6e-15 Score=118.58 Aligned_cols=130 Identities=18% Similarity=0.318 Sum_probs=96.1
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV- 88 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~- 88 (176)
+|.+.. .....+.+|+.+.|.|.+.+ |.+.+.|+++|..+....++.+. .....|.|.++..+|+|.|+|.+.|.
T Consensus 112 ~p~i~~-~~~~~v~~g~~v~l~C~~~~-p~~~v~W~~~g~~l~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 187 (642)
T 1e07_A 112 KPSISS-NNSKPVEDKDAVAFTCEPET-QDATYLWWVNNQSLPVSPRLQLS--NGNRTLTLFNVTRNDTASYKCETQNPV 187 (642)
T ss_pred CCcEEc-cCceeEecCCcEEEEEECCC-CCeeEEEEECCeECCCCCceEEc--CCCCEEEEeCCCcccCeeEEEEEecCC
Confidence 444443 33456788999999999998 88999999999999876665443 34578999999999999999999998
Q ss_pred CCceEEEEEEEEEecCCC----------------------CCCCCCCCCeEEecC------CEEEE----eccCCeeEEE
Q psy8425 89 HKDVVSAFAEVSINLRPD----------------------NMGGPCPLDSYCLNG------GSCTY----YDTVGELVCQ 136 (176)
Q Consensus 89 g~~~~s~~~~l~V~~~p~----------------------~~g~p~p~~~~~~~~------~~~~i----~~d~g~y~C~ 136 (176)
+.. .+..+.|.|..+|. ..|.|.|...+..+| +.+.| .+|+|.|.|.
T Consensus 188 ~~~-~s~~~~l~V~~~p~~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i~~~~~L~i~~~~~~d~G~Y~C~ 266 (642)
T 1e07_A 188 SAR-RSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQSTQELFIPNITVNNSGSYTCQ 266 (642)
T ss_pred CCc-ccceEEEEEEeCCCCcEEecCCcccccCCEEEEEEEcCCCCCcEEEEEECCeEcccCCceEEecccccCCeEEEEE
Confidence 543 22237788875543 346666544555443 34555 6899999999
Q ss_pred ecCCcccCc
Q psy8425 137 CAEGYKGQR 145 (176)
Q Consensus 137 ~~~n~~g~~ 145 (176)
+.|..|..
T Consensus 267 -a~n~~g~~ 274 (642)
T 1e07_A 267 -AHNSDTGL 274 (642)
T ss_pred -EEeCCCce
Confidence 88887753
No 159
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.63 E-value=5.9e-15 Score=103.41 Aligned_cols=92 Identities=18% Similarity=0.245 Sum_probs=66.1
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeec-CCCeeEEEeCC--EE-------------ec---cCcceEEEEecceEEEEEc
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGN-PLPAVSWFKDN--VE-------------IT---TNKRLKIQFKKKRSTLIIT 71 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~p~i~W~~~g--~~-------------l~---~~~~~~~~~~~~~~~L~i~ 71 (176)
|.+..++ .+.+.+|+++.|.|.+.+. |.+.+.|+|.. .. .. ...++.+.......+|.|.
T Consensus 2 ~~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 80 (218)
T 3s96_B 2 LVLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSIS 80 (218)
T ss_dssp CSEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEES
T ss_pred CeEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEc
Confidence 4456666 7889999999999999999 89999999821 10 00 0135554444567789999
Q ss_pred ccCCCCCEEEEEEEEcC-C---CceEEEEEEEEEec
Q psy8425 72 RIRSEDAGRYECRGTGV-H---KDVVSAFAEVSINL 103 (176)
Q Consensus 72 ~v~~~d~G~Y~C~a~n~-g---~~~~s~~~~l~V~~ 103 (176)
+++.+|+|.|.|.+.|. + .......+.|.|..
T Consensus 81 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~ 116 (218)
T 3s96_B 81 NIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLG 116 (218)
T ss_dssp SCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEES
T ss_pred cCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEec
Confidence 99999999999999998 5 12222225677763
No 160
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.63 E-value=9.3e-16 Score=115.63 Aligned_cols=123 Identities=13% Similarity=0.046 Sum_probs=86.9
Q ss_pred ceeEEecCCcEEEEEEEee-----cCCCeeEEEeCCEEecc--------CcceEEEE----------ecceEEEEEcccC
Q psy8425 18 RNVSVKLRQSLRLVCRCKG-----NPLPAVSWFKDNVEITT--------NKRLKIQF----------KKKRSTLIITRIR 74 (176)
Q Consensus 18 ~~~~v~~G~~~~l~C~~~g-----~p~p~i~W~~~g~~l~~--------~~~~~~~~----------~~~~~~L~i~~v~ 74 (176)
..+.+.+|+.+.|.|.+.+ .|.|.+.|+++|..+.. +.++.+.. .....+|.|.++.
T Consensus 184 ~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 263 (363)
T 1wio_A 184 SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQAL 263 (363)
T ss_dssp EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBC
T ss_pred CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCC
Confidence 5567889999999998877 78899999999987765 34443322 1124589999999
Q ss_pred CCCCEEEEEEEEcC--CCceEEEEEEEEEecCCC--------CCCCCCCC--CeEEecCCE------EEE----eccCCe
Q psy8425 75 SEDAGRYECRGTGV--HKDVVSAFAEVSINLRPD--------NMGGPCPL--DSYCLNGGS------CTY----YDTVGE 132 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~--g~~~~s~~~~l~V~~~p~--------~~g~p~p~--~~~~~~~~~------~~i----~~d~g~ 132 (176)
.+|+|.|+|.|.|. .+. .+..+.|.|...+. +.|.|.|. ..+..++.. +.| .+|+|.
T Consensus 264 ~~d~G~Y~C~a~n~~~~g~-~~~~~~l~V~~v~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~~~~l~i~~v~~~d~G~ 342 (363)
T 1wio_A 264 PQYAGSGNLTLALEAKTGK-LHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGM 342 (363)
T ss_dssp GGGCEEEEEEECBTTTTCC-EEEEEEEEEEEECCCSSSEEEEEESSCCTTCCEEEECSSSSCSEEESSSEEEESSCCSEE
T ss_pred cCcCcEEEEEEEEhhhcCe-EEEEEeEEEEEecCCCeeEEEEEccccCCCccEEEEeCCCceeeeeeeeeeeecccccee
Confidence 99999999999998 332 22227777764332 45666665 455544433 223 689999
Q ss_pred eEEEecCCcc
Q psy8425 133 LVCQCAEGYK 142 (176)
Q Consensus 133 y~C~~~~n~~ 142 (176)
|+|. |.|..
T Consensus 343 Y~C~-a~~~~ 351 (363)
T 1wio_A 343 WQCL-LSDSG 351 (363)
T ss_dssp EEEE-ECSSS
T ss_pred EEEE-EecCC
Confidence 9999 77543
No 161
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.62 E-value=7.2e-15 Score=102.84 Aligned_cols=95 Identities=27% Similarity=0.445 Sum_probs=73.7
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccC---cceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTN---KRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~---~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+... .++..........|.|.++..+|+|.|+|.|.|
T Consensus 109 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N 188 (212)
T 2yd6_A 109 PTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATN 188 (212)
T ss_dssp CEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred ceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEEC
Confidence 67777777788999999999999999999999999999988753 334433334568999999999999999999999
Q ss_pred C-CCceEEEEEEEEEecCCC
Q psy8425 88 V-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 88 ~-g~~~~s~~~~l~V~~~p~ 106 (176)
. |... +..+.|.|..+|.
T Consensus 189 ~~G~~~-s~~a~l~~~~~~~ 207 (212)
T 2yd6_A 189 SAGTRY-SAPANLYVRGTKH 207 (212)
T ss_dssp TTEEEE-CCCEEEEEEC---
T ss_pred CCCccc-cccccEEEEeccc
Confidence 9 5543 3348888887654
No 162
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.62 E-value=2.4e-15 Score=103.80 Aligned_cols=97 Identities=16% Similarity=0.269 Sum_probs=78.8
Q ss_pred CccccCCCeEEeC-----CceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcc-cCCCC
Q psy8425 4 GLRATIHPIEVSG-----LRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITR-IRSED 77 (176)
Q Consensus 4 ~l~v~~~p~~~~~-----~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~-v~~~d 77 (176)
.|.|..+|.+..+ +....+.+|+.+.|.|.+.|.|.|.+.|++++..+....++.+........|.|.+ +..+|
T Consensus 93 ~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d 172 (197)
T 2j8h_A 93 SLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKD 172 (197)
T ss_dssp EEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEEEECTTCCCGGG
T ss_pred EEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceEEEEeCCCCccc
Confidence 3455555554322 35667889999999999999999999999999999877777776656778999999 99999
Q ss_pred CEEEEEEEEcC-CCceEEEEEEEEEe
Q psy8425 78 AGRYECRGTGV-HKDVVSAFAEVSIN 102 (176)
Q Consensus 78 ~G~Y~C~a~n~-g~~~~s~~~~l~V~ 102 (176)
+|.|+|.|.|. |....+ +.|.|.
T Consensus 173 ~G~Y~C~a~N~~g~~~~~--~~l~V~ 196 (197)
T 2j8h_A 173 AGFYVVCAKNRFGIDQKT--VELDVA 196 (197)
T ss_dssp CEEEEEEEEETTEEEEEE--EEEEEE
T ss_pred CEeEEEEEEeCCCcEeEE--EEEEEe
Confidence 99999999999 776666 777775
No 163
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.62 E-value=1.5e-15 Score=104.28 Aligned_cols=98 Identities=26% Similarity=0.472 Sum_probs=79.6
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEE
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 83 (176)
.|.+..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+....++.+ ...+.|.|.++..+|+|.|+|
T Consensus 94 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C 170 (192)
T 2iep_A 94 ALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAV---LESGSLRIHNVQKEDAGQYRC 170 (192)
T ss_dssp EEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEE---CTTSCEEESSCCGGGCEEEEE
T ss_pred EEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEE---ecCCcEEEecCChhhCEEEEE
Confidence 45667788888888888899999999999999999999999999999887665543 344589999999999999999
Q ss_pred EEEcC-CCceEEEEEEEEEecCC
Q psy8425 84 RGTGV-HKDVVSAFAEVSINLRP 105 (176)
Q Consensus 84 ~a~n~-g~~~~s~~~~l~V~~~p 105 (176)
.|.|. |... +..+.|.|..+|
T Consensus 171 ~a~n~~g~~~-s~~~~l~V~~pp 192 (192)
T 2iep_A 171 VAKNSLGTAY-SKLVKLEVEVFA 192 (192)
T ss_dssp EEEETTEEEE-CCCEEEEEEC--
T ss_pred EEEcCCCcEE-EEEEEEEEEeCC
Confidence 99999 5542 222888888765
No 164
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.62 E-value=1.9e-14 Score=114.63 Aligned_cols=90 Identities=14% Similarity=0.255 Sum_probs=67.9
Q ss_pred eCCceeEEecCCcEEEEEEEeecCCC---eeEEEeCCEEec-----c---------CcceEEEE--ecceEEEEEcccCC
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGNPLP---AVSWFKDNVEIT-----T---------NKRLKIQF--KKKRSTLIITRIRS 75 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~p~p---~i~W~~~g~~l~-----~---------~~~~~~~~--~~~~~~L~i~~v~~ 75 (176)
..|.++.+.+|+.+.|.|.+.+.|.+ .+.|+|++..+. . ..++.+.. .....+|.|.+++.
T Consensus 5 ~~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~ 84 (585)
T 2ocw_A 5 FGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQ 84 (585)
T ss_pred cCcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCc
Confidence 45667889999999999999988754 789999875321 1 12333322 12345799999999
Q ss_pred CCCEEEEEEEEcC-CCceEEEEEEEEEecCCC
Q psy8425 76 EDAGRYECRGTGV-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 76 ~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p~ 106 (176)
+|+|.|+|.+.|. +..... +.|.|..+|.
T Consensus 85 ~D~G~Y~C~~~n~~~~~~~~--~~l~V~~~p~ 114 (585)
T 2ocw_A 85 DDSGRYKCGLGINSRGLSFD--VSLEVSQGPG 114 (585)
T ss_pred ccCEEEEEEcccCCCCceEE--EEEEEecCcc
Confidence 9999999999998 666656 8889887775
No 165
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.62 E-value=1.3e-14 Score=109.87 Aligned_cols=101 Identities=20% Similarity=0.306 Sum_probs=82.3
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCc--ceEEEEecceEEEEEcccCCCCCEEE
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNK--RLKIQFKKKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y 81 (176)
.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+.... ++.+........|.|.++...|+|.|
T Consensus 94 ~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 173 (389)
T 2jll_A 94 YLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRY 173 (389)
T ss_dssp EEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEE
T ss_pred EEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEE
Confidence 4677788888777766678999999999999999999999999999987643 45554445567899999999999999
Q ss_pred EEEEEcC-CCceEEEEEEEEEecCCC
Q psy8425 82 ECRGTGV-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 82 ~C~a~n~-g~~~~s~~~~l~V~~~p~ 106 (176)
+|.|.|. |....+ +.|.+...|.
T Consensus 174 ~C~a~N~~G~~~~~--~~l~v~~~P~ 197 (389)
T 2jll_A 174 NCTATNHIGTRFQE--YILALADVPS 197 (389)
T ss_dssp EEEEEETTEEEEEE--EEEEECCCCC
T ss_pred EEEEEcCCCcEEEE--EEEEecCCCC
Confidence 9999999 766555 6777665544
No 166
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.62 E-value=1.4e-15 Score=106.39 Aligned_cols=87 Identities=20% Similarity=0.327 Sum_probs=57.7
Q ss_pred ceeEEecCCcEEEEEEEeecCCCe---eEEEeCCEEecc----------------CcceEEE-------EecceEEEEEc
Q psy8425 18 RNVSVKLRQSLRLVCRCKGNPLPA---VSWFKDNVEITT----------------NKRLKIQ-------FKKKRSTLIIT 71 (176)
Q Consensus 18 ~~~~v~~G~~~~l~C~~~g~p~p~---i~W~~~g~~l~~----------------~~~~~~~-------~~~~~~~L~i~ 71 (176)
.++.+..|++++|.|.+.+.+.+. +.|+|++..+.. ..+.... ....+.+|.|.
T Consensus 9 ~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 88 (225)
T 4fmk_A 9 PEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFR 88 (225)
T ss_dssp SEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEEC
T ss_pred CEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEc
Confidence 346788999999999999887764 789997643311 0111100 01234679999
Q ss_pred ccCCCCCEEEEEEEEcC-CCceEEEEEEEEEecCC
Q psy8425 72 RIRSEDAGRYECRGTGV-HKDVVSAFAEVSINLRP 105 (176)
Q Consensus 72 ~v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p 105 (176)
+++.+|+|.|.|.+.|. +..... ...+.+..+|
T Consensus 89 ~v~~~D~G~Y~C~~~~~~~~~~~~-~~~~~~~~~~ 122 (225)
T 4fmk_A 89 GLRVEDEGNYTCEFATFPNGTRRG-VTWLRVIAQP 122 (225)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEE-EEEEEEEBCC
T ss_pred cCCHHHCcceEEEEEeCCCcceee-eeeeeeecCC
Confidence 99999999999999987 443332 2445555443
No 167
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.62 E-value=6.8e-15 Score=105.65 Aligned_cols=81 Identities=19% Similarity=0.249 Sum_probs=62.7
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecC-----CCeeEEEeC--CEEe------------ccCcceEEEEecceEEE
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNP-----LPAVSWFKD--NVEI------------TTNKRLKIQFKKKRSTL 68 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p-----~p~i~W~~~--g~~l------------~~~~~~~~~~~~~~~~L 68 (176)
..++.+...+..+.+.+|++++|.|.+.+.| .+.+.|+|+ +..+ ....++.+.......+|
T Consensus 36 ~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L 115 (254)
T 2c1o_A 36 LRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTL 115 (254)
T ss_dssp --CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEE
T ss_pred eeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEE
Confidence 3466777778889999999999999999888 489999983 3221 11245555444566799
Q ss_pred EEcccCCCCCEEEEEEEEcC
Q psy8425 69 IITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 69 ~i~~v~~~d~G~Y~C~a~n~ 88 (176)
.|.+++.+|+|.|.|.+.|.
T Consensus 116 ~I~~v~~~D~G~Y~C~a~n~ 135 (254)
T 2c1o_A 116 KISRVEAEDLGIYYCVQGSH 135 (254)
T ss_dssp EESSCCGGGCSEEEEEECSS
T ss_pred EECcCCcccCEEEEEEEEcC
Confidence 99999999999999999987
No 168
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.62 E-value=2.7e-15 Score=92.74 Aligned_cols=83 Identities=22% Similarity=0.426 Sum_probs=64.6
Q ss_pred EEeCCceeEEecCCcEEEEEEEe-ecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCK-GNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HK 90 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~-g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~ 90 (176)
++..+..+.+.+|+++.|.|.+. +.|.+.+.|+|++....... .. ...++|.|.+++.+|+|.|.|.+.|. |.
T Consensus 13 ~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~--~~---~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 87 (98)
T 1gl4_B 13 TVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSR--AM---DFNGILTIRNVQPSDAGTYVCTGSNMFAM 87 (98)
T ss_dssp EECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTT--EE---EETTEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred EEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCce--ee---cCCCEEEEeCCChhhCEEEEEEecCCCCc
Confidence 34456778999999999999998 68999999999754433321 11 22358999999999999999999999 77
Q ss_pred ceEEEEEEEEEe
Q psy8425 91 DVVSAFAEVSIN 102 (176)
Q Consensus 91 ~~~s~~~~l~V~ 102 (176)
...+ +.|.|.
T Consensus 88 ~~~~--~~l~V~ 97 (98)
T 1gl4_B 88 DQGT--ATLHVQ 97 (98)
T ss_dssp EEEE--EEEEEC
T ss_pred cccE--EEEEEe
Confidence 6666 777764
No 169
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.62 E-value=1.6e-15 Score=112.12 Aligned_cols=94 Identities=18% Similarity=0.230 Sum_probs=75.4
Q ss_pred CccccCCCeEE-eCCceeEEecCCcEEEEEEEeecCCC-eeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEE
Q psy8425 4 GLRATIHPIEV-SGLRNVSVKLRQSLRLVCRCKGNPLP-AVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 4 ~l~v~~~p~~~-~~~~~~~v~~G~~~~l~C~~~g~p~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 81 (176)
.|.|..+|.+. .......+.+|+.+.|.|.+.|.|.| .+.|+|+|..+..... ..+.+|.|.++..+|+|.|
T Consensus 210 ~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~~------~~~~~L~i~~v~~~d~G~Y 283 (313)
T 4fqp_A 210 NLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFAV------AQGAQLLIRPVDKPINTTL 283 (313)
T ss_dssp ECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEE------EETTEEEECCCSSCCEEEE
T ss_pred ecccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCceE------EeCCEEEECcCChhhCEEE
Confidence 45677788874 44455667789999999999999999 6999999988865321 2345899999999999999
Q ss_pred EEEEEcC-CCceEEEEEEEEEecCC
Q psy8425 82 ECRGTGV-HKDVVSAFAEVSINLRP 105 (176)
Q Consensus 82 ~C~a~n~-g~~~~s~~~~l~V~~~p 105 (176)
+|.|.|. |....+ +.|.|.++|
T Consensus 284 ~C~a~N~~G~~~~~--~~l~V~~~P 306 (313)
T 4fqp_A 284 ICNVTNALGARQAE--LTVQVKEGP 306 (313)
T ss_dssp EEEEECSSCEEEEE--EEEEEECCC
T ss_pred EEEEEeCCCcEEEE--EEEEEEeCC
Confidence 9999999 877777 889998643
No 170
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.62 E-value=8.3e-16 Score=112.19 Aligned_cols=96 Identities=16% Similarity=0.126 Sum_probs=70.2
Q ss_pred CccccCCCe-EEeCCceeEEecCCcEEEEEEEeecCC--CeeEEEeC-CEEeccCcceEEEEecceEEEEEcccCCCCCE
Q psy8425 4 GLRATIHPI-EVSGLRNVSVKLRQSLRLVCRCKGNPL--PAVSWFKD-NVEITTNKRLKIQFKKKRSTLIITRIRSEDAG 79 (176)
Q Consensus 4 ~l~v~~~p~-~~~~~~~~~v~~G~~~~l~C~~~g~p~--p~i~W~~~-g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G 79 (176)
.|.|..+|. +...+....+.+|+.+.|.|.+.+ |. +.+.|+++ +..+....++.+ .....|.|.++..+|+|
T Consensus 82 ~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~---~~~~~L~i~~~~~~d~G 157 (292)
T 4dkd_C 82 HLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSF---SPWHGFTIHRAKFIQSQ 157 (292)
T ss_dssp CCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEEC---CSSSCCEETTCCGGGCS
T ss_pred EEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccc---cCCceEEECCCCHHHCe
Confidence 456666665 456677888999999999999987 44 78999997 555554444332 23345999999999999
Q ss_pred EEEEEEEcCCCceEEEEEEEEEec
Q psy8425 80 RYECRGTGVHKDVVSAFAEVSINL 103 (176)
Q Consensus 80 ~Y~C~a~n~g~~~~s~~~~l~V~~ 103 (176)
.|+|.+.|.+....+..+.|.|..
T Consensus 158 ~Y~C~a~n~~~~~~s~~~~l~V~~ 181 (292)
T 4dkd_C 158 DYQCSALMGGRKVMSISIRLKVQK 181 (292)
T ss_dssp EEEEEECSTTSCEECCCEEEEEEC
T ss_pred EEEEEEEeCCCceeEEEEEEEEeC
Confidence 999999988333333237888876
No 171
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.61 E-value=1.2e-14 Score=101.58 Aligned_cols=89 Identities=12% Similarity=0.204 Sum_probs=64.6
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeC--CEEe------------ccCcceEEEEecceEEEEEcccCCCCC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKD--NVEI------------TTNKRLKIQFKKKRSTLIITRIRSEDA 78 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~--g~~l------------~~~~~~~~~~~~~~~~L~i~~v~~~d~ 78 (176)
+.. +..+.+.+|++++|.|.+.+.|.+.+.|+|+ |..+ ....++.+.......+|.|.+++.+|+
T Consensus 4 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 82 (210)
T 1lk3_L 4 LTQ-PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDT 82 (210)
T ss_dssp EEC-CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEC-CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHC
Confidence 344 6778899999999999999998899999984 2221 112455554445667999999999999
Q ss_pred EEEEEEEEcC-CCceEEEEEEEEEec
Q psy8425 79 GRYECRGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 79 G~Y~C~a~n~-g~~~~s~~~~l~V~~ 103 (176)
|.|.|.+.|. +..... ...|.|..
T Consensus 83 G~Y~C~~~~~~~~~~~~-~~~l~V~~ 107 (210)
T 1lk3_L 83 AIYFCQQSWNGPLTFGA-GTKLELKR 107 (210)
T ss_dssp EEEEEEECSSSSCEECC-CEEEEECC
T ss_pred eEEEEEEEcCCCceeCC-CEEEEEcC
Confidence 9999999998 432211 14566654
No 172
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.61 E-value=9.7e-15 Score=93.71 Aligned_cols=96 Identities=20% Similarity=0.209 Sum_probs=68.8
Q ss_pred EeCCceeEEecCCcEEEEEEEeecC--CCeeEEEeCCEEecc-----CcceEEEE---ecceEEEEEcccCCCCCEEEEE
Q psy8425 14 VSGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDNVEITT-----NKRLKIQF---KKKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g~~l~~-----~~~~~~~~---~~~~~~L~i~~v~~~d~G~Y~C 83 (176)
+.++..+.+.+|+++.|.|.+.|.| .+.+.|++++..+.. ..+..... ....++|.|.+++.+|+|.|+|
T Consensus 12 i~p~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 91 (122)
T 3s35_X 12 LSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTC 91 (122)
T ss_dssp EESCSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEE
T ss_pred EcCCCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEE
Confidence 3445566899999999999999944 468899998874421 11111110 0245689999999999999999
Q ss_pred EEEcC-CCceEEEEEEEEEecCCCCCCCC
Q psy8425 84 RGTGV-HKDVVSAFAEVSINLRPDNMGGP 111 (176)
Q Consensus 84 ~a~n~-g~~~~s~~~~l~V~~~p~~~g~p 111 (176)
.|.|. |....+ +.|.|..+|...-.|
T Consensus 92 ~a~n~~g~~~~~--~~l~V~~~p~i~~~p 118 (122)
T 3s35_X 92 AASSGLMTKKNS--TFVRVHEKPFVAFGS 118 (122)
T ss_dssp EEECSSCEEEEE--EEEEEEEEECC----
T ss_pred EEccCCCceEEE--EEEEEeccCeEEeec
Confidence 99999 777766 999999888754333
No 173
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.61 E-value=3.9e-15 Score=112.77 Aligned_cols=95 Identities=20% Similarity=0.380 Sum_probs=72.4
Q ss_pred CCCeEEeCCce-eEEecCCcEEEEEEEeecCCCeeEEEe-CCEEeccCcceEEEEecceEEEEEcccCCCC------CEE
Q psy8425 9 IHPIEVSGLRN-VSVKLRQSLRLVCRCKGNPLPAVSWFK-DNVEITTNKRLKIQFKKKRSTLIITRIRSED------AGR 80 (176)
Q Consensus 9 ~~p~~~~~~~~-~~v~~G~~~~l~C~~~g~p~p~i~W~~-~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d------~G~ 80 (176)
.+|.|+..+.+ +.+.+|+.+.|.|.+.|.|.|.+.|+| +|..+....+.... ..+++|.|.+++.+| +|.
T Consensus 2 ~~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~--~~~~~L~i~~~~~~d~~~~~d~G~ 79 (388)
T 2v5m_A 2 KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQI--SSDGKLVFPPFRAEDYRQEVHAQV 79 (388)
T ss_dssp EEEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEE--CSTTEEEECCCCGGGCCHHHHEEE
T ss_pred CCCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEE--cCCceEEecccChhhccccccCce
Confidence 47888877665 568899999999999999999999999 78877654333222 345689999999987 999
Q ss_pred EEEEEEcC-CCceEEEEEEEEEecCCC
Q psy8425 81 YECRGTGV-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 81 Y~C~a~n~-g~~~~s~~~~l~V~~~p~ 106 (176)
|+|.|.|. |... +..+.|.|..+|.
T Consensus 80 Y~C~a~n~~g~~~-s~~~~v~v~~~p~ 105 (388)
T 2v5m_A 80 YACLARNQFGSII-SRDVHVRAVVAQY 105 (388)
T ss_dssp EEEEEEETTEEEE-CCCEEEEEECCCC
T ss_pred EEEEEEccCCeEE-ecceEEEEccccc
Confidence 99999998 5422 2226777766554
No 174
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.61 E-value=5.1e-15 Score=103.96 Aligned_cols=128 Identities=16% Similarity=0.174 Sum_probs=85.7
Q ss_pred CCceeEEecCCcEEEEEEEeecCC-----CeeEEEeCCEEecc---------------CcceEEEE---ecceEEEEEcc
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKGNPL-----PAVSWFKDNVEITT---------------NKRLKIQF---KKKRSTLIITR 72 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g~p~-----p~i~W~~~g~~l~~---------------~~~~~~~~---~~~~~~L~i~~ 72 (176)
++..+.+.+|+++.|.|.+.+.|. +.+.|+|++..+.. ..+..+.. ...+.+|.|.+
T Consensus 7 p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 86 (222)
T 3sbw_C 7 PKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITD 86 (222)
T ss_dssp SCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESS
T ss_pred CCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcC
Confidence 445667899999999999987774 38999997643311 12222210 02346899999
Q ss_pred cCCCCCEEEEEEEEcCCCceEEEEEEEEEecCCC---------------------CCCCCCCCCeEEecCC---------
Q psy8425 73 IRSEDAGRYECRGTGVHKDVVSAFAEVSINLRPD---------------------NMGGPCPLDSYCLNGG--------- 122 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n~g~~~~s~~~~l~V~~~p~---------------------~~g~p~p~~~~~~~~~--------- 122 (176)
++.+|+|.|+|.+.|.+..... +.|.|..+|. +.|.|.|...|..++|
T Consensus 87 v~~~D~G~Y~C~~~~~~~~~~~--~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~ 164 (222)
T 3sbw_C 87 VKLQDAGVYRCMISYGGADYKR--ITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTT 164 (222)
T ss_dssp CCGGGCEEEEEEEESSSEEEEE--EEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEE
T ss_pred cccccCeEEEEEEEeCCCceeE--EEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccce
Confidence 9999999999999995444444 8888887654 3455655333333311
Q ss_pred --------EEE------E-eccCCeeEEEecCCcccCcC
Q psy8425 123 --------SCT------Y-YDTVGELVCQCAEGYKGQRC 146 (176)
Q Consensus 123 --------~~~------i-~~d~g~y~C~~~~n~~g~~c 146 (176)
... + ..|.|.|+|. |.|..|..-
T Consensus 165 ~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~-a~n~~g~~~ 202 (222)
T 3sbw_C 165 TNSKREEKLFNVTSTLRINTTTNEIFYCT-FRRLDPEEN 202 (222)
T ss_dssp EECC----CEEEEEEEEEECCTTCEEEEE-EEETTTTEE
T ss_pred EEEcCCCCCEEEEEEEEEeccCCcEEEEE-EEeCcccee
Confidence 111 1 4889999999 999888653
No 175
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.61 E-value=5.6e-15 Score=102.33 Aligned_cols=126 Identities=13% Similarity=0.173 Sum_probs=85.6
Q ss_pred CCceeEEecCCcEEEEEEEee-cCCCeeEEEeCCEEec---cC-----------cce--EEEEecceEEEEEcccCCCCC
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKG-NPLPAVSWFKDNVEIT---TN-----------KRL--KIQFKKKRSTLIITRIRSEDA 78 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g-~p~p~i~W~~~g~~l~---~~-----------~~~--~~~~~~~~~~L~i~~v~~~d~ 78 (176)
.+..+.+.+|++++|.|.+.+ .+.+.+.|++++..+. .. .++ ++.+ ..+.+|.|.+++.+|+
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~-~~~~sL~I~~v~~~D~ 82 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNF-TQSYSLQLSNLKMEDT 82 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEE-CTTCCEEECSCCGGGC
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEE-CCCeEEEECCCCcccC
Confidence 466788999999999999875 4557999999986542 10 000 1222 2457899999999999
Q ss_pred EEEEEEEEcC-CCceEEEEEEEEEecCCC-----------------------CCCC-CCCCCeEEe------cCCEEEE-
Q psy8425 79 GRYECRGTGV-HKDVVSAFAEVSINLRPD-----------------------NMGG-PCPLDSYCL------NGGSCTY- 126 (176)
Q Consensus 79 G~Y~C~a~n~-g~~~~s~~~~l~V~~~p~-----------------------~~g~-p~p~~~~~~------~~~~~~i- 126 (176)
|.|.|.+.+. +..... +.|.|..+|. +.|. |.|...|.. .++.+.|
T Consensus 83 G~Y~C~~~~~~~~~~~~--~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~~~l~i~ 160 (193)
T 2if7_A 83 GSYRAQISTKTSAKLSS--YTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNLTVS 160 (193)
T ss_dssp EEEEEEEECSSCEEEEE--EEEEEECCCEEEEEEECCC---CSSEEEEEEEEEESCCTTCEEEEEETTEEEESSSEEEEE
T ss_pred ceEEEEEEecCCCeEEE--EEEEEEccCCCCeEecCceeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCCCCeEEEE
Confidence 9999999998 554444 7788765432 1222 233223333 3345655
Q ss_pred ---e-ccCCeeEEEecCCcccCc
Q psy8425 127 ---Y-DTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 127 ---~-~d~g~y~C~~~~n~~g~~ 145 (176)
. .|.|.|+|. |.|..|..
T Consensus 161 ~~~~~~d~G~Y~C~-a~N~~g~~ 182 (193)
T 2if7_A 161 WDPRISSEQDYTCI-AENAVSNL 182 (193)
T ss_dssp ECTTTCSCCEEEEE-EEETTEEE
T ss_pred eccCcCCCCcEEEE-EECCCCcc
Confidence 2 279999999 99988864
No 176
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.61 E-value=5.3e-15 Score=109.91 Aligned_cols=97 Identities=23% Similarity=0.328 Sum_probs=68.6
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeec-CCCeeEEEeCCEEecc---------CcceEEEEe-----cceEEEEEcccC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGN-PLPAVSWFKDNVEITT---------NKRLKIQFK-----KKRSTLIITRIR 74 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~p~i~W~~~g~~l~~---------~~~~~~~~~-----~~~~~L~i~~v~ 74 (176)
...+...+.++.+.+|+++.|.|.+.+. |.+.+.|+|++.+... ..++..... ....+|.|.+++
T Consensus 3 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~ 82 (327)
T 2wng_A 3 ELQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNIT 82 (327)
T ss_dssp CCCEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCC
T ss_pred eeEEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCc
Confidence 3456777888999999999999999987 8899999998753210 012222110 234579999999
Q ss_pred CCCCEEEEEEEEcC-CCce---EEEEEEEEEecCCC
Q psy8425 75 SEDAGRYECRGTGV-HKDV---VSAFAEVSINLRPD 106 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~-g~~~---~s~~~~l~V~~~p~ 106 (176)
.+|+|.|+|.+.|. +... .+..+.|.|..+|.
T Consensus 83 ~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~ 118 (327)
T 2wng_A 83 PADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPS 118 (327)
T ss_dssp GGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCC
T ss_pred cccCeEEEEEeecCCCcceeEeecCcEEEEEEecCC
Confidence 99999999999998 4321 11125777776543
No 177
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.61 E-value=9.7e-16 Score=105.60 Aligned_cols=63 Identities=19% Similarity=0.356 Sum_probs=52.1
Q ss_pred EEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcc-cCCCCCEEEEEEEEcC-CCceEE
Q psy8425 21 SVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITR-IRSEDAGRYECRGTGV-HKDVVS 94 (176)
Q Consensus 21 ~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~n~-g~~~~s 94 (176)
...+|+.+.|.|.+.+ +. .+.|+|+|..+... .+.+|.|.+ +..+|+|.|+|.|.|. |.....
T Consensus 10 v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~---------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~ 74 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DE-NLKWEKNGQELPQK---------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLY 74 (186)
T ss_dssp EEEETTEEEEECSSCC-CT-TCEEEETTEEECSC---------CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEE
T ss_pred EEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCC---------CCCEEEECCCCccccCEEEEEEEEeCCCcEEEE
Confidence 4577999999999987 43 49999999988763 235799999 9999999999999998 664444
No 178
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.61 E-value=1.1e-15 Score=107.28 Aligned_cols=81 Identities=14% Similarity=0.081 Sum_probs=57.2
Q ss_pred CceeEEecC--CcEEEEEEEeecCCCeeEEEeC---CEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcCCCc
Q psy8425 17 LRNVSVKLR--QSLRLVCRCKGNPLPAVSWFKD---NVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGVHKD 91 (176)
Q Consensus 17 ~~~~~v~~G--~~~~l~C~~~g~p~p~i~W~~~---g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~g~~ 91 (176)
+..+.+.+| +.+.|.|.+.+ |.+.+.|+++ +..+..+.++.. .....|.|.+++.+|+|.|+|.|.|.+..
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~---~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~ 89 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISW---DSKKGFTIPSYMISYAGMVFCEAKINDES 89 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEE---ETTTEEEEEGGGTTTCSEEEEEEC----C
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccc---cCCccEEEccCChhcCceEEEEEEECCee
Confidence 467889999 99999999986 7789999884 666655433322 23457999999999999999999987433
Q ss_pred eEEEEEEEEE
Q psy8425 92 VVSAFAEVSI 101 (176)
Q Consensus 92 ~~s~~~~l~V 101 (176)
..+..+.|.|
T Consensus 90 ~~s~~~~l~v 99 (213)
T 2x1w_L 90 YQSIMYIVVV 99 (213)
T ss_dssp EECCCEEEEE
T ss_pred EEEEEEEEEE
Confidence 3332245555
No 179
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.61 E-value=6e-15 Score=103.12 Aligned_cols=91 Identities=14% Similarity=0.245 Sum_probs=66.5
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC---EE--e---------ccCcceEEEEecceEEEEEcccCCC
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN---VE--I---------TTNKRLKIQFKKKRSTLIITRIRSE 76 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g---~~--l---------~~~~~~~~~~~~~~~~L~i~~v~~~ 76 (176)
|.+...+..+.+.+|+++.|.|.+.+.|.+.+.|+|.. .. + ....++.+.......+|.|.+++.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESE 81 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcc
Confidence 45666678889999999999999999999999999832 11 0 0134555554456779999999999
Q ss_pred CCEEEEEEEEcCCCceEEEEEEEEE
Q psy8425 77 DAGRYECRGTGVHKDVVSAFAEVSI 101 (176)
Q Consensus 77 d~G~Y~C~a~n~g~~~~s~~~~l~V 101 (176)
|+|.|.|.+.|...........|.|
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V 106 (213)
T 3r06_A 82 DIGSYYCQQYYNYPWTFGPGTKLEI 106 (213)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEE
T ss_pred cCEEEEEecccCCceEEcCCceEEE
Confidence 9999999999872211111155666
No 180
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.61 E-value=1.3e-14 Score=99.14 Aligned_cols=99 Identities=19% Similarity=0.376 Sum_probs=79.8
Q ss_pred CCccccCCCeEEeCCceeEEecCCcEEEEEEEeecC-CCeeEEEe---CCE-Eecc--CcceEEEEecceEEEEEcccC-
Q psy8425 3 KGLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNP-LPAVSWFK---DNV-EITT--NKRLKIQFKKKRSTLIITRIR- 74 (176)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p-~p~i~W~~---~g~-~l~~--~~~~~~~~~~~~~~L~i~~v~- 74 (176)
..|.|..+|.+...+....+.+|+.+.|.|.+.|.| .|.+.|++ ++. .+.. ..++.+........|.|.++.
T Consensus 76 ~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~ 155 (184)
T 3b5h_A 76 ANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNM 155 (184)
T ss_dssp EEEEECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCT
T ss_pred EEEEEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccc
Confidence 356778899988888888899999999999999999 79999999 444 4432 255666554566799999999
Q ss_pred CCCCEEEEEEEEcC-CCceEEEEEEEEEec
Q psy8425 75 SEDAGRYECRGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~ 103 (176)
.+|+|.|.|.|.|. |....+ +.|.|..
T Consensus 156 ~~d~G~Y~C~a~N~~g~~~~~--~~l~V~~ 183 (184)
T 3b5h_A 156 EADPGQYRCNGTSSKGSDQAI--ITLRVRS 183 (184)
T ss_dssp TTSSEEEEEEEEETTEEEEEE--EEEEEC-
T ss_pred cccCceEEEEEEeCCCcceEE--EEEEEec
Confidence 99999999999999 776666 7787753
No 181
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.61 E-value=9.2e-15 Score=94.33 Aligned_cols=92 Identities=13% Similarity=0.240 Sum_probs=69.6
Q ss_pred EeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEec--------cCcceEEEE-ecceEEEEEcccCCCCCEEEEEE
Q psy8425 14 VSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEIT--------TNKRLKIQF-KKKRSTLIITRIRSEDAGRYECR 84 (176)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~--------~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~ 84 (176)
...+..+.+.+|++++|.|.+.+.|.+.+.|++++..+. ...++.+.. .....+|.|.+++.+|+|.|.|.
T Consensus 5 ~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 84 (124)
T 3rbg_A 5 TNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCL 84 (124)
T ss_dssp CCSEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred cCCCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEE
Confidence 445677889999999999999999999999998654321 334444432 23467999999999999999999
Q ss_pred EEcCCCceEEEEEEEEEecCCCC
Q psy8425 85 GTGVHKDVVSAFAEVSINLRPDN 107 (176)
Q Consensus 85 a~n~g~~~~s~~~~l~V~~~p~~ 107 (176)
+.|.+..... +.|.|..+|..
T Consensus 85 a~n~g~~~~~--~~l~V~~~P~~ 105 (124)
T 3rbg_A 85 HYSDSVSTKE--VKVIVLATMKG 105 (124)
T ss_dssp EESSSEEEEE--EEEEEECC---
T ss_pred EEcCCCCcEE--EEEEEEeCCCC
Confidence 9998444445 89999987763
No 182
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.60 E-value=5.6e-16 Score=106.17 Aligned_cols=121 Identities=17% Similarity=0.250 Sum_probs=82.6
Q ss_pred ceeEEecCCcEEEEEEEeecCCCeeEEEeCCEE--ecc------------CcceEEEE---ecceEEEEEcccCCCCCEE
Q psy8425 18 RNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVE--ITT------------NKRLKIQF---KKKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 18 ~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~--l~~------------~~~~~~~~---~~~~~~L~i~~v~~~d~G~ 80 (176)
..+.+.+|+++.|.|.+.+.|.+.+.|++++.. +.. ..++.... .....+|.|.+++.+|+|.
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~ 82 (184)
T 2ny1_B 3 KVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 82 (184)
T ss_dssp CEEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEE
T ss_pred CcEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEE
Confidence 346789999999999999999999999998853 211 11222110 1124569999999999999
Q ss_pred EEEEEEcC-CCceEEEEEEEEEec---CCC--------------CCCCCCCCCeEEec-------CCEEEE----eccCC
Q psy8425 81 YECRGTGV-HKDVVSAFAEVSINL---RPD--------------NMGGPCPLDSYCLN-------GGSCTY----YDTVG 131 (176)
Q Consensus 81 Y~C~a~n~-g~~~~s~~~~l~V~~---~p~--------------~~g~p~p~~~~~~~-------~~~~~i----~~d~g 131 (176)
|.|.+.|. + . +.|.|.. ++. +.|.|.|...+..+ ++.|.| .+|+|
T Consensus 83 Y~C~~~~~~~----~--~~l~V~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~L~i~~v~~~d~G 156 (184)
T 2ny1_B 83 YICEVEDQKE----E--VQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSG 156 (184)
T ss_dssp EEEEETTEEE----E--EEEEEEEEEESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEEEESSEEEESSCCGGGCE
T ss_pred EEEEEEcCCC----c--EEEEEEEecCCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCccccCceEEEEecCCcCCCe
Confidence 99999987 4 2 4444432 222 45667664344433 456666 68999
Q ss_pred eeEEEecCCcccCc
Q psy8425 132 ELVCQCAEGYKGQR 145 (176)
Q Consensus 132 ~y~C~~~~n~~g~~ 145 (176)
.|.|. +.|..|..
T Consensus 157 ~Y~C~-a~n~~~~~ 169 (184)
T 2ny1_B 157 TWTCT-VLQNQKKV 169 (184)
T ss_dssp EEEEE-EEETTEEE
T ss_pred EEEEE-EEECCceE
Confidence 99999 77765543
No 183
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=4e-15 Score=92.61 Aligned_cols=82 Identities=20% Similarity=0.453 Sum_probs=69.0
Q ss_pred ceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcCCCceEEEEE
Q psy8425 18 RNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGVHKDVVSAFA 97 (176)
Q Consensus 18 ~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~s~~~ 97 (176)
.++.+.+|+++.|.|.+. .|.+.+.|+|+|..+....++.+........|.|.++..+|+|.|+|.+.+. ..+ +
T Consensus 19 ~~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~---~~~--~ 92 (102)
T 2eo1_A 19 REVQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGGQ---QLS--F 92 (102)
T ss_dssp EEEEEETTCCEEECCBCS-CSSSCCEEEETTEECCCCSSEEEEEETTEEEEEETTCCTTTCSCEEEEETTE---ECC--E
T ss_pred ccEEEeCCCcEEEEEEec-CCCCceEEEECCEECCCCCCEEEEEcCCEEEEEECCCCcccCEEEEEEcCCC---cEE--E
Confidence 456899999999999998 8889999999999998777777765556679999999999999999999653 334 7
Q ss_pred EEEEecCC
Q psy8425 98 EVSINLRP 105 (176)
Q Consensus 98 ~l~V~~~p 105 (176)
.|.|..+|
T Consensus 93 ~l~V~~p~ 100 (102)
T 2eo1_A 93 RLQVAGQC 100 (102)
T ss_dssp EEEEESCC
T ss_pred EEEEeCCC
Confidence 88888765
No 184
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.60 E-value=7.8e-16 Score=114.84 Aligned_cols=83 Identities=22% Similarity=0.370 Sum_probs=64.1
Q ss_pred eeEEecCCcEEEEEE-----EeecCCCeeEEEeCCEEeccC-cceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CCc
Q psy8425 19 NVSVKLRQSLRLVCR-----CKGNPLPAVSWFKDNVEITTN-KRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HKD 91 (176)
Q Consensus 19 ~~~v~~G~~~~l~C~-----~~g~p~p~i~W~~~g~~l~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~ 91 (176)
...+.+|+.+.|.|. +.|.|.+.+.|+++|..+... .++. .......|.|.++..+|+|.|+|.|.|. +..
T Consensus 129 ~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~--~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 206 (339)
T 3o4o_C 129 PQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFL--SVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQ 206 (339)
T ss_dssp EEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEE--ECTTSSEEEESSCCGGGCEEEEEEEECCBTTB
T ss_pred ceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeE--EcCCcceEEEcccCHhhCeEEEEEEEECCCCe
Confidence 346889999999999 788999999999999988764 3332 2234468999999999999999999998 532
Q ss_pred --eEEEEEEEEEec
Q psy8425 92 --VVSAFAEVSINL 103 (176)
Q Consensus 92 --~~s~~~~l~V~~ 103 (176)
..+..+.|.|..
T Consensus 207 ~~~~~~~~~l~V~~ 220 (339)
T 3o4o_C 207 QYNITRSIELRIKK 220 (339)
T ss_dssp CCEEEEEEEEEEEC
T ss_pred EEEEEEEEEEEEEc
Confidence 223237777764
No 185
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.59 E-value=3.6e-15 Score=110.03 Aligned_cols=70 Identities=21% Similarity=0.483 Sum_probs=56.6
Q ss_pred eeEEecCCcEEEEEEE------eecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEE-cC-CC
Q psy8425 19 NVSVKLRQSLRLVCRC------KGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGT-GV-HK 90 (176)
Q Consensus 19 ~~~v~~G~~~~l~C~~------~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~-n~-g~ 90 (176)
...+.+|+++.|.|.+ .|.|.|.+.|+|++..+..... ++. .....|.|.++..+|+|.|+|.|. |. |.
T Consensus 112 ~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~-~~~--~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~ 188 (315)
T 1itb_B 112 KQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI-HFS--GVKDRLIVMNVAEKHRGNYTCHASYTYLGK 188 (315)
T ss_dssp EEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSS-SEE--EETTEEEESSCCGGGCEEEEEEEEEEETTE
T ss_pred ceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccc-eEe--ecCceEEEEeceehhCcEEEEEEEcCCCCc
Confidence 3568899999999998 8899999999999999865332 222 234589999999999999999999 56 54
Q ss_pred c
Q psy8425 91 D 91 (176)
Q Consensus 91 ~ 91 (176)
.
T Consensus 189 ~ 189 (315)
T 1itb_B 189 Q 189 (315)
T ss_dssp E
T ss_pred E
Confidence 4
No 186
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.59 E-value=4.7e-15 Score=101.74 Aligned_cols=96 Identities=27% Similarity=0.383 Sum_probs=74.5
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEecc--CcceEEEEecceEEEEEcccCCCCCEEE
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITT--NKRLKIQFKKKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~--~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 81 (176)
.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ..++.+ ..++.|.|.++..+|+|.|
T Consensus 90 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y 166 (189)
T 2v44_A 90 VLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAM---LANNNLQILNINKSDEGIY 166 (189)
T ss_dssp EEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEE---CTTSCEEETTCCGGGCEEE
T ss_pred EEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEE---ecCCcEEEEEcCcccCeEE
Confidence 45667788887777778899999999999999999999999999988753 333333 3445899999999999999
Q ss_pred EEEEEcC-CCceEEEEEEEEEe
Q psy8425 82 ECRGTGV-HKDVVSAFAEVSIN 102 (176)
Q Consensus 82 ~C~a~n~-g~~~~s~~~~l~V~ 102 (176)
+|.|.|. +.......+.|.|.
T Consensus 167 ~C~a~n~~~~~~~~~~~~v~Vn 188 (189)
T 2v44_A 167 RCEGRVEARGEIDFRDIIVIVN 188 (189)
T ss_dssp EEEEEETTTTEEEEEEEEEEEE
T ss_pred EEEEEccccCceeeeeEEEEEe
Confidence 9999999 66665533555553
No 187
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.59 E-value=2.1e-14 Score=101.73 Aligned_cols=79 Identities=18% Similarity=0.299 Sum_probs=62.4
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--EEe------------ccCcceEEEEecceEEEEEcccCC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--VEI------------TTNKRLKIQFKKKRSTLIITRIRS 75 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~~l------------~~~~~~~~~~~~~~~~L~i~~v~~ 75 (176)
.+.+...+..+.+.+|+++.|.|.+.+.|.+.+.|+|+. ... ....++.+.......+|.|.+++.
T Consensus 24 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 103 (237)
T 3sob_L 24 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 103 (237)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred cceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCCh
Confidence 445666677889999999999999999988999999832 110 113456555445778999999999
Q ss_pred CCCEEEEEEEEcC
Q psy8425 76 EDAGRYECRGTGV 88 (176)
Q Consensus 76 ~d~G~Y~C~a~n~ 88 (176)
+|+|.|.|.+.+.
T Consensus 104 ~D~G~Y~C~~~~~ 116 (237)
T 3sob_L 104 EDFATYYCQQSYT 116 (237)
T ss_dssp GGCEEEEEEECSS
T ss_pred hhCeEEEEeeccC
Confidence 9999999999887
No 188
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.59 E-value=3.4e-15 Score=104.36 Aligned_cols=72 Identities=21% Similarity=0.363 Sum_probs=57.4
Q ss_pred CceeEEecCCcEEEEEEEeecCCCeeEEEeC--CEEec------------cCcceEEEEecceEEEEEcccCCCCCEEEE
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNPLPAVSWFKD--NVEIT------------TNKRLKIQFKKKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 82 (176)
+..+.+.+|++++|.|.+.+.|.+.+.|+|+ |..+. ...++.+.......+|.|.+++.+|+|.|.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 6678899999999999998888889999984 33221 134555554456679999999999999999
Q ss_pred EEEEcC
Q psy8425 83 CRGTGV 88 (176)
Q Consensus 83 C~a~n~ 88 (176)
|.+.|.
T Consensus 86 C~~~n~ 91 (212)
T 1nfd_E 86 CLSSYG 91 (212)
T ss_dssp EEEEET
T ss_pred EEEEcc
Confidence 999973
No 189
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.59 E-value=2.4e-15 Score=108.64 Aligned_cols=92 Identities=15% Similarity=0.232 Sum_probs=60.7
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEe---ecCCCeeEEEeCCEEeccC------------------cceEEEE--ecceEE
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCK---GNPLPAVSWFKDNVEITTN------------------KRLKIQF--KKKRST 67 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~---g~p~p~i~W~~~g~~l~~~------------------~~~~~~~--~~~~~~ 67 (176)
+.+...+..+.+.+|+++.|.|.+. +.+.+.+.|++++...... .+..+.. ...+.+
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 85 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS 85 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE
Confidence 4455667778899999999999987 6777889999965322111 2221100 023368
Q ss_pred EEEcccCCCCCEEEEEEEEcC-CCceEEEEEEEEEe
Q psy8425 68 LIITRIRSEDAGRYECRGTGV-HKDVVSAFAEVSIN 102 (176)
Q Consensus 68 L~i~~v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~ 102 (176)
|.|.+++.+|+|.|+|.+.|. +....+..+.|.|.
T Consensus 86 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~ 121 (268)
T 3mj6_A 86 LLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL 121 (268)
T ss_dssp EEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE
T ss_pred EEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe
Confidence 999999999999999999998 55544433666664
No 190
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.59 E-value=1.1e-14 Score=108.89 Aligned_cols=126 Identities=16% Similarity=0.247 Sum_probs=88.4
Q ss_pred eCCceeEEecCCcEEEEEEEeecCC-----------CeeEEEeCCE------Eec-cCcceEEEEecceEEEEEcccCCC
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGNPL-----------PAVSWFKDNV------EIT-TNKRLKIQFKKKRSTLIITRIRSE 76 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~p~-----------p~i~W~~~g~------~l~-~~~~~~~~~~~~~~~L~i~~v~~~ 76 (176)
....++.+.+|+.+.|.|.+.+.|. +.+.|+|++. .+. .....++.. ....|.|.+++.+
T Consensus 12 ~~~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~--~~~~L~i~~~~~~ 89 (349)
T 4dep_C 12 DTMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISK--EKDVLWFRPTLLN 89 (349)
T ss_dssp CCCCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEE--ETTEEEESSCCGG
T ss_pred ceeeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEee--cCCEEEEccCChh
Confidence 3466788999999999999987654 8999999873 221 001122222 3458999999999
Q ss_pred CCEEEEEEEEcC-CCceEEEEEEEEEecCCC-------------------------C-----CCCCCCCCeEE-------
Q psy8425 77 DAGRYECRGTGV-HKDVVSAFAEVSINLRPD-------------------------N-----MGGPCPLDSYC------- 118 (176)
Q Consensus 77 d~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p~-------------------------~-----~g~p~p~~~~~------- 118 (176)
|+|.|+|.|.|. +....+ +.|.|..+|. + .|.|.|...|.
T Consensus 90 D~G~Y~C~a~n~~~~~~~~--~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~ 167 (349)
T 4dep_C 90 DTGNYTCMLRNTTYCSKVA--FPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQ 167 (349)
T ss_dssp GCEEEEEEEECSSCEEEEE--EEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECC
T ss_pred hCEEEEEEEecCCceEEEE--EEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECC
Confidence 999999999998 666666 7888876433 1 34555422222
Q ss_pred ------ecCCEEEE----eccCCeeEEEecCCcc-cCc
Q psy8425 119 ------LNGGSCTY----YDTVGELVCQCAEGYK-GQR 145 (176)
Q Consensus 119 ------~~~~~~~i----~~d~g~y~C~~~~n~~-g~~ 145 (176)
.++..|.| .+|+|.|+|. +.|.. |..
T Consensus 168 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~-a~n~~~g~~ 204 (349)
T 4dep_C 168 NFNNVIPEGMNLSFLIALISNNGNYTCV-VTYPENGRT 204 (349)
T ss_dssp SCSSEEEETTEEEEESCCGGGCEEEEEE-EEEEETTEE
T ss_pred CccceeecCCEEEEeeeeecCCcEEEEE-EEEeeCCEE
Confidence 23456777 6999999999 88876 554
No 191
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.58 E-value=1.3e-14 Score=99.32 Aligned_cols=95 Identities=24% Similarity=0.494 Sum_probs=76.0
Q ss_pred ccccCCCeEEeCCc--eeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEE
Q psy8425 5 LRATIHPIEVSGLR--NVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 5 l~v~~~p~~~~~~~--~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 82 (176)
|.+..+|.+..... ...+.+|+.+.|.|.+.|.|.|.+.|+++|..+....++.+. ....+|.|.++..+|+|.|+
T Consensus 91 l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~ 168 (189)
T 2v5t_A 91 VIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILK--GSNTELTVRNIINSDGGPYV 168 (189)
T ss_dssp EEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEE--TTTTEEEECSCCGGGCEEEE
T ss_pred EEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEe--cCCCEEEEcCCChhhCeeEE
Confidence 44555666655443 456778999999999999999999999999998876655443 45678999999999999999
Q ss_pred EEEEcC-CCceEEEEEEEEEec
Q psy8425 83 CRGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 83 C~a~n~-g~~~~s~~~~l~V~~ 103 (176)
|.|.|. |....+ +.|.|.+
T Consensus 169 C~a~n~~g~~~~~--~~l~V~v 188 (189)
T 2v5t_A 169 CRATNKAGEDEKQ--AFLQVFV 188 (189)
T ss_dssp EEEEETTEEEEEE--EEEEEEC
T ss_pred EEEEeCCCceeEE--EEEEEEe
Confidence 999999 777766 7777653
No 192
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.58 E-value=4.7e-16 Score=114.58 Aligned_cols=131 Identities=15% Similarity=0.276 Sum_probs=86.8
Q ss_pred EeCCceeEEecCCcEEEEEEE-eecCCCeeEEEeCCEEeccCcceEE-EEecceEEEEEcccCCCCCEEEEEEEEcC-CC
Q psy8425 14 VSGLRNVSVKLRQSLRLVCRC-KGNPLPAVSWFKDNVEITTNKRLKI-QFKKKRSTLIITRIRSEDAGRYECRGTGV-HK 90 (176)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~~-~g~p~p~i~W~~~g~~l~~~~~~~~-~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~ 90 (176)
...+.......|+.+.|.|.+ .|.|.|.+.|++++..+........ ......+.|.|..+..+|.|.|+|.|.|. +.
T Consensus 118 ~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~ 197 (308)
T 4fom_A 118 IKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALE 197 (308)
T ss_dssp EECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCS
T ss_pred ccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCC
Confidence 344555556678999999975 6899999999999987754211000 00012357999999999999999999998 65
Q ss_pred ceEEEEEEEEEecCCC----------------------CCCCCCCC-CeEE-----------ecCCEEEE-----eccCC
Q psy8425 91 DVVSAFAEVSINLRPD----------------------NMGGPCPL-DSYC-----------LNGGSCTY-----YDTVG 131 (176)
Q Consensus 91 ~~~s~~~~l~V~~~p~----------------------~~g~p~p~-~~~~-----------~~~~~~~i-----~~d~g 131 (176)
...+..+.|.|..+|. +.|.|.|. ..|. ..++.+.+ .+|+|
T Consensus 198 ~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~~~~~~~l~i~~v~~~d~G 277 (308)
T 4fom_A 198 KDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLLASDNTLHFVHPLTFNYSG 277 (308)
T ss_dssp SCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCBCSTTEEECCSCCCSCCCS
T ss_pred CceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEEEcCCeEEEECCCChhhCE
Confidence 5544336666665543 23444431 1111 22334433 68999
Q ss_pred eeEEEecCCcccCc
Q psy8425 132 ELVCQCAEGYKGQR 145 (176)
Q Consensus 132 ~y~C~~~~n~~g~~ 145 (176)
.|.|. |.|..|..
T Consensus 278 ~Y~C~-A~N~~G~~ 290 (308)
T 4fom_A 278 VYICK-VTNSLGQR 290 (308)
T ss_dssp EEEEE-EEETTEEE
T ss_pred EEEEE-EEeCCCcE
Confidence 99999 99999965
No 193
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.58 E-value=7.4e-15 Score=100.82 Aligned_cols=95 Identities=15% Similarity=0.306 Sum_probs=75.7
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEE
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 83 (176)
.|.+..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+......++.. ..++.|.|.++..+|+|.|+|
T Consensus 94 ~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C 172 (191)
T 1epf_A 94 NVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIV-LSNNYLQIRGIKKTDEGTYRC 172 (191)
T ss_dssp EEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEE-CTTSCEEETTCCGGGCEEEEE
T ss_pred EEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEE-ecCCeEEECCCChhhCEEEEE
Confidence 4566778888888888889999999999999999999999999999886533222222 344589999999999999999
Q ss_pred EEEcC-CCceEEEEEEEEE
Q psy8425 84 RGTGV-HKDVVSAFAEVSI 101 (176)
Q Consensus 84 ~a~n~-g~~~~s~~~~l~V 101 (176)
.|.|. +..... ..+.|
T Consensus 173 ~a~n~~~~~~~~--~~i~v 189 (191)
T 1epf_A 173 EGRILARGEINF--KDIQV 189 (191)
T ss_dssp EEEEGGGTEEEE--EEEEE
T ss_pred EEEEecceeEEE--EEEEE
Confidence 99998 565555 44444
No 194
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.58 E-value=1.5e-15 Score=109.83 Aligned_cols=127 Identities=17% Similarity=0.294 Sum_probs=87.9
Q ss_pred CccccC--CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEE
Q psy8425 4 GLRATI--HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 4 ~l~v~~--~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 81 (176)
.|.|.. +|.+. +....+.+|+.+.|.|.+. |.|.+.| +|..+... .....|.|..+..+|.|.|
T Consensus 92 ~l~V~~~p~p~~~--~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~--------~~~~~l~i~~~~~~~~g~Y 157 (265)
T 2oz4_A 92 TVTIYSFPAPNVI--LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPL--------GPRAQLLLKATPEDNGRSF 157 (265)
T ss_dssp EEEEECCCCCEEE--ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCC--------SSEECCEEECCGGGTTEEE
T ss_pred EEEEeCCCCceee--cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCC--------CCcEEEEEccccccCCceE
Confidence 455554 34444 3455688899999999988 8899999 88777432 2346788999999999999
Q ss_pred EEEEEcC--CCce-EEEEEEEEEecCCC-----------------------CCCCCCCCCeEEecCC------EEEE--e
Q psy8425 82 ECRGTGV--HKDV-VSAFAEVSINLRPD-----------------------NMGGPCPLDSYCLNGG------SCTY--Y 127 (176)
Q Consensus 82 ~C~a~n~--g~~~-~s~~~~l~V~~~p~-----------------------~~g~p~p~~~~~~~~~------~~~i--~ 127 (176)
+|.|.|. |... .+..+.|.|..+|. +.|.|.|...+..++. .+.. .
T Consensus 158 ~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~~g~~~~v~~ 237 (265)
T 2oz4_A 158 SCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTR 237 (265)
T ss_dssp EEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTTSCEECCG
T ss_pred EEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCcccCCCCcEEEeeh
Confidence 9999864 4433 11227788876554 3455655444444443 3333 6
Q ss_pred ccCCeeEEEecCCcccCc
Q psy8425 128 DTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 128 ~d~g~y~C~~~~n~~g~~ 145 (176)
+|+|.|.|. |.|..|..
T Consensus 238 ~d~G~Y~C~-a~N~~G~~ 254 (265)
T 2oz4_A 238 DLEGTYLCR-ARSTQGEV 254 (265)
T ss_dssp GGCEEEEEE-EEETTEEE
T ss_pred hhCeEEEEE-EECCCCcE
Confidence 899999999 99988854
No 195
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.58 E-value=6.8e-15 Score=102.76 Aligned_cols=87 Identities=14% Similarity=0.214 Sum_probs=63.3
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeC--CEEec------------cCcceEEEEecceEEEEEcccCCCCC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKD--NVEIT------------TNKRLKIQFKKKRSTLIITRIRSEDA 78 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~i~~v~~~d~ 78 (176)
+..++ .+.+.+|++++|.|.+. |.+.+.|+|+ +..+. ...++.+.......+|.|.+++.+|+
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 80 (211)
T 3tv3_L 4 LTQPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDE 80 (211)
T ss_dssp CBCCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGC
T ss_pred EEeCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHC
Confidence 34445 77899999999999998 8889999993 22211 22455555456678999999999999
Q ss_pred EEEEEEEEcC-CCceEEEEEEEEEe
Q psy8425 79 GRYECRGTGV-HKDVVSAFAEVSIN 102 (176)
Q Consensus 79 G~Y~C~a~n~-g~~~~s~~~~l~V~ 102 (176)
|.|.|.+.|. +.......+.|.|.
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~~l~V~ 105 (211)
T 3tv3_L 81 AVYYCGSLVGNWDVIFGGGTKLTVL 105 (211)
T ss_dssp EEEEEEEEETTTEEEECCCEEEEEC
T ss_pred EEEEEEEecCCCceeECCCceEEEe
Confidence 9999999998 51222222677776
No 196
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.57 E-value=2.9e-15 Score=111.22 Aligned_cols=134 Identities=17% Similarity=0.246 Sum_probs=94.2
Q ss_pred CccccCCCeEE--eCCceeEEecC---CcEEEEEE-EeecCCCeeEEEeCC--EEecc-----CcceEEEEecceEEEEE
Q psy8425 4 GLRATIHPIEV--SGLRNVSVKLR---QSLRLVCR-CKGNPLPAVSWFKDN--VEITT-----NKRLKIQFKKKRSTLII 70 (176)
Q Consensus 4 ~l~v~~~p~~~--~~~~~~~v~~G---~~~~l~C~-~~g~p~p~i~W~~~g--~~l~~-----~~~~~~~~~~~~~~L~i 70 (176)
.|.|..+|.+. ..+..+.+.+| +.+.|.|. +.+.|.|.+.|++++ ..... ...+ .....|.|
T Consensus 124 ~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~-----~~~~~L~i 198 (331)
T 3u83_A 124 NLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTV-----TVISRYRL 198 (331)
T ss_dssp EEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCE-----EEEEEEEE
T ss_pred EEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeECCCCcE-----EEEEEEEE
Confidence 45667777763 34566788888 77999998 889999999999953 22111 1111 11357899
Q ss_pred cccCCCCCEEEEEEEEcC-CCceEEEEEEEEEecCCC----------------------CCCCCCCC-CeEEe-------
Q psy8425 71 TRIRSEDAGRYECRGTGV-HKDVVSAFAEVSINLRPD----------------------NMGGPCPL-DSYCL------- 119 (176)
Q Consensus 71 ~~v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p~----------------------~~g~p~p~-~~~~~------- 119 (176)
..+..+|+|.|+|.|.|. +....+ +.|.|..+|. +.|.|.|. ..|..
T Consensus 199 ~~~~~~d~G~Y~C~a~n~~~~~~~~--~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~ 276 (331)
T 3u83_A 199 VPSREAHQQSLACIVNYHMDRFKES--LTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPK 276 (331)
T ss_dssp CCCGGGTTCEEEEEEEETTEEEEEE--EECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCT
T ss_pred EeccccCCCEEEEEEecCCCcceee--EEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccc
Confidence 999999999999999999 665555 7777765443 33555554 33332
Q ss_pred ----cCCEEEE-----eccCCeeEEEecCCcccCc
Q psy8425 120 ----NGGSCTY-----YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 120 ----~~~~~~i-----~~d~g~y~C~~~~n~~g~~ 145 (176)
.++.|.| .+|.|.|.|. |.|..|..
T Consensus 277 ~~~~~~~~L~i~~~v~~~d~G~Y~C~-a~N~~G~~ 310 (331)
T 3u83_A 277 GVEAQNRTLFFKGPINYSLAGTYICE-ATNPIGTR 310 (331)
T ss_dssp TEEEETTEEEECSCCCGGGCEEEEEE-EEETTEEE
T ss_pred cceecCcEEEEeCCCccccCeEEEEE-EEeccccc
Confidence 4556766 4789999999 99999975
No 197
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.57 E-value=3.9e-14 Score=101.24 Aligned_cols=77 Identities=19% Similarity=0.251 Sum_probs=60.9
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--E---Eec---------cCcceEEEEecceEEEEEcccCCCC
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--V---EIT---------TNKRLKIQFKKKRSTLIITRIRSED 77 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~---~l~---------~~~~~~~~~~~~~~~L~i~~v~~~d 77 (176)
.+...+..+.+.+|++++|.|.+.+.|.+.+.|+|+. . .+. ...++.+.......+|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (242)
T 2znx_A 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED 82 (242)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred cEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHH
Confidence 4566677889999999999999999998999999842 1 111 1345555444556789999999999
Q ss_pred CEEEEEEEEcC
Q psy8425 78 AGRYECRGTGV 88 (176)
Q Consensus 78 ~G~Y~C~a~n~ 88 (176)
+|.|.|.+.|.
T Consensus 83 ~G~Y~C~~~n~ 93 (242)
T 2znx_A 83 FGMYFCQQSNS 93 (242)
T ss_dssp CEEEEEEECSS
T ss_pred CEEEEEeEecC
Confidence 99999999987
No 198
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.57 E-value=2.6e-14 Score=98.25 Aligned_cols=97 Identities=21% Similarity=0.353 Sum_probs=78.2
Q ss_pred ccccCCCeEEeC---CceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCC-CCCEE
Q psy8425 5 LRATIHPIEVSG---LRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRS-EDAGR 80 (176)
Q Consensus 5 l~v~~~p~~~~~---~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~ 80 (176)
|.|..+|.+... +....+.+|+.+.|.|.+.+.|.|.+.|++++..+....++.+........|.|.++.. +|+|.
T Consensus 95 l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~ 174 (197)
T 3lcy_A 95 LLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGK 174 (197)
T ss_dssp EEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEE
T ss_pred EEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCce
Confidence 445555555432 34567889999999999999999999999999999887777766555568999999985 89999
Q ss_pred EEEEEEcC-CCceEEEEEEEEEec
Q psy8425 81 YECRGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 81 Y~C~a~n~-g~~~~s~~~~l~V~~ 103 (176)
|+|.|.|. |....+ +.|.|..
T Consensus 175 Y~C~a~n~~g~~~~~--~~l~V~~ 196 (197)
T 3lcy_A 175 YKVQLSNVFGTVDAI--LDVEIQD 196 (197)
T ss_dssp EEEEEECSSCEEEEE--EEEEEEC
T ss_pred EEEEEEcCcCceEEE--EEEEEec
Confidence 99999999 777666 7787764
No 199
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.57 E-value=3.1e-14 Score=101.29 Aligned_cols=90 Identities=18% Similarity=0.281 Sum_probs=66.5
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeecC----CCeeEEEeCC--EE---ec---------cCcceEEEEecceEEEEEccc
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGNP----LPAVSWFKDN--VE---IT---------TNKRLKIQFKKKRSTLIITRI 73 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~p----~p~i~W~~~g--~~---l~---------~~~~~~~~~~~~~~~L~i~~v 73 (176)
.+...+..+.+.+|++++|.|.+.+.| .+.+.|+|+. .. +. ...++.+.......+|.|.++
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (240)
T 1moe_A 3 VLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPV 82 (240)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred ceEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCC
Confidence 355667788999999999999999988 7789999952 21 10 124555544455668999999
Q ss_pred CCCCCEEEEEEEEcC-CC-ceEEEEEEEEEec
Q psy8425 74 RSEDAGRYECRGTGV-HK-DVVSAFAEVSINL 103 (176)
Q Consensus 74 ~~~d~G~Y~C~a~n~-g~-~~~s~~~~l~V~~ 103 (176)
+.+|+|.|.|.+.|. +. .... +.|.|..
T Consensus 83 ~~~D~G~Y~C~~~n~~~~~~~~~--~~l~V~~ 112 (240)
T 1moe_A 83 EADDVATYYCQQTNEDPYTFGGG--TKLEIKG 112 (240)
T ss_dssp CGGGCEEEEEEECSSSSCCBCCC--EEEEECC
T ss_pred ChhhCEEEEEEEccCCceeecCC--EEEEEec
Confidence 999999999999998 43 2233 5666665
No 200
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.57 E-value=1.1e-14 Score=110.18 Aligned_cols=93 Identities=23% Similarity=0.489 Sum_probs=80.8
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEE
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 83 (176)
.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+....++.+. .+.|.|.++..+|+|.|+|
T Consensus 288 ~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C 363 (382)
T 1cs6_A 288 RIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVS----GGELRFSKLVLEDSGMYQC 363 (382)
T ss_dssp EEEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEE----TTEEEESSCCGGGCEEEEE
T ss_pred EEEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEE----CCEEEECcCCcccCEEEEE
Confidence 466777888888888889999999999999999999999999999999876665442 3589999999999999999
Q ss_pred EEEcC-CCceEEEEEEEEEe
Q psy8425 84 RGTGV-HKDVVSAFAEVSIN 102 (176)
Q Consensus 84 ~a~n~-g~~~~s~~~~l~V~ 102 (176)
.|.|. |....+ +.|.|.
T Consensus 364 ~a~N~~G~~~~~--~~l~V~ 381 (382)
T 1cs6_A 364 VAENKHGTVYAS--AELTVQ 381 (382)
T ss_dssp EEEETTEEEEEE--EEEEEE
T ss_pred EEEeCCCeEEEE--EEEEEe
Confidence 99999 877777 888875
No 201
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.57 E-value=8.1e-14 Score=99.76 Aligned_cols=93 Identities=15% Similarity=0.284 Sum_probs=66.7
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC-----EEe---------ccCcceEEEEecceEEEEEcccCC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN-----VEI---------TTNKRLKIQFKKKRSTLIITRIRS 75 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g-----~~l---------~~~~~~~~~~~~~~~~L~i~~v~~ 75 (176)
.+.+...+..+.+.+|++++|.|.+.+.|.+.+.|+|+. ..+ ....++.+.......+|.|.+++.
T Consensus 4 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 83 (250)
T 3esu_F 4 DIVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQ 83 (250)
T ss_dssp CCCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCCh
Confidence 345666777888999999999999999999999999842 111 112455444445566899999999
Q ss_pred CCCEEEEEEEEcC-CCceEEEEEEEEEec
Q psy8425 76 EDAGRYECRGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 76 ~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~ 103 (176)
+|+|.|.|.+.|. +... .....|.|..
T Consensus 84 ~D~G~Y~C~~~n~~~~~~-~~~~~l~V~~ 111 (250)
T 3esu_F 84 EDIGTYFCQQGNTLPWTF-GGGTKLEIRR 111 (250)
T ss_dssp GGCEEEEEEECSSSSCEE-CCCEEEEEC-
T ss_pred hhCEEEEEEEeeCCCceE-CCCEEEEEEC
Confidence 9999999999987 3321 1114566654
No 202
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.57 E-value=8e-14 Score=99.61 Aligned_cols=86 Identities=23% Similarity=0.325 Sum_probs=60.3
Q ss_pred ceeEEecCCcEEEEEEEeecC--CCeeEEEeCC--EEe-----------------ccCcceEEEEe--cceEEEEEcccC
Q psy8425 18 RNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDN--VEI-----------------TTNKRLKIQFK--KKRSTLIITRIR 74 (176)
Q Consensus 18 ~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g--~~l-----------------~~~~~~~~~~~--~~~~~L~i~~v~ 74 (176)
..+.+.+|++++|.|.+.+.| .+.+.|+|+. ..+ ....++.+... ....+|.|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 89 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC
Confidence 457899999999999999887 5789999832 111 01245555442 345789999999
Q ss_pred CCCCEEEEEEEEcC-CCceEEEEEEEEEec
Q psy8425 75 SEDAGRYECRGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~ 103 (176)
.+|+|.|.|.+.|. +.......+.|.|..
T Consensus 90 ~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~ 119 (247)
T 2ghw_B 90 AEDTAVYYCARDRSYYLDYWGQGTLVTVSS 119 (247)
T ss_dssp GGGCEEEEEEEEETTEEEEECCCEEEEECS
T ss_pred HHHCEEEEEeeeccCCccccCCceEEEEec
Confidence 99999999999987 322221114666654
No 203
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.56 E-value=1.1e-14 Score=109.34 Aligned_cols=96 Identities=10% Similarity=0.186 Sum_probs=75.4
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEec-------ceEEEEEcccCCC
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKK-------KRSTLIITRIRSE 76 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~-------~~~~L~i~~v~~~ 76 (176)
.|.|..+|.+ ....+.+|+.+.|.|.+.|.|.|.+.|+++|..+............ ..++|.|.+++.+
T Consensus 244 ~l~V~~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 319 (347)
T 2ifg_A 244 QVNVSFPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHV 319 (347)
T ss_dssp CCCCBEEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGG
T ss_pred EEEEcCCCee----eeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcc
Confidence 4566667775 1223467999999999999999999999999999865544433221 3678999999999
Q ss_pred CCEEEEEEEEcC-CCceEEEEEEEEEecCC
Q psy8425 77 DAGRYECRGTGV-HKDVVSAFAEVSINLRP 105 (176)
Q Consensus 77 d~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p 105 (176)
|+|.|+|.|.|. |....+ +.|.|..+|
T Consensus 320 d~G~Y~C~a~N~~G~~~~~--~~l~V~~~P 347 (347)
T 2ifg_A 320 NNGNYTLLAANPFGQASAS--IMAAFMDNP 347 (347)
T ss_dssp GCEEEEEEEEETTEEEEEE--EEECSCCCC
T ss_pred cCceEEEEEecCCCceeeE--EEEEecCCC
Confidence 999999999999 877766 888887765
No 204
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.56 E-value=2.8e-14 Score=99.71 Aligned_cols=75 Identities=16% Similarity=0.264 Sum_probs=58.5
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecC---CCeeEEEeC--CEEe------------ccCcceEEEEecceEEEEEcccCC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNP---LPAVSWFKD--NVEI------------TTNKRLKIQFKKKRSTLIITRIRS 75 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p---~p~i~W~~~--g~~l------------~~~~~~~~~~~~~~~~L~i~~v~~ 75 (176)
+.. +..+.+.+|++++|.|.+.+.| .+.+.|+|+ +..+ ....++.+.......+|.|.+++.
T Consensus 4 v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 82 (212)
T 1q0x_L 4 VTQ-ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQT 82 (212)
T ss_dssp EEE-CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEC-CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCc
Confidence 445 7778899999999999999887 478999985 2222 112455554445667999999999
Q ss_pred CCCEEEEEEEEcC
Q psy8425 76 EDAGRYECRGTGV 88 (176)
Q Consensus 76 ~d~G~Y~C~a~n~ 88 (176)
+|+|.|.|.+.|.
T Consensus 83 ~D~G~Y~C~~~~~ 95 (212)
T 1q0x_L 83 EDEAIYFCALWSN 95 (212)
T ss_dssp GGCEEEEEEEECS
T ss_pred cCCEEEEEEEecC
Confidence 9999999999997
No 205
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.56 E-value=2.6e-14 Score=112.55 Aligned_cols=87 Identities=16% Similarity=0.104 Sum_probs=63.9
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCC--eeEEEeCCEEeccCcceEEEEe-c-----ceEEEEEcccCCCCCE
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLP--AVSWFKDNVEITTNKRLKIQFK-K-----KRSTLIITRIRSEDAG 79 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p--~i~W~~~g~~l~~~~~~~~~~~-~-----~~~~L~i~~v~~~d~G 79 (176)
..+|.+...+....+.+|+.+.|.|.+.|.|.+ .+.|+|+|.++..+.+...... . ..+.|.|.+++.+|+|
T Consensus 112 ~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G 191 (523)
T 2rcj_C 112 KANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHR 191 (523)
T ss_pred CcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCc
Confidence 356777666666667789999999999998765 8999999988865432211110 1 1247999999999999
Q ss_pred EEEEEEEcC-CCceEE
Q psy8425 80 RYECRGTGV-HKDVVS 94 (176)
Q Consensus 80 ~Y~C~a~n~-g~~~~s 94 (176)
.|+|.|.|. +.....
T Consensus 192 ~Y~C~a~n~~~~~~~~ 207 (523)
T 2rcj_C 192 SYSCQVTHEGSTVEKT 207 (523)
T ss_pred eEEEEEEecCcccccc
Confidence 999999998 554433
No 206
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.56 E-value=3.5e-14 Score=104.61 Aligned_cols=93 Identities=19% Similarity=0.405 Sum_probs=77.0
Q ss_pred CCeEEe-CCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEe-cceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 10 HPIEVS-GLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFK-KKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 10 ~p~~~~-~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
+|.+.. .+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+....++.+... .....|.|.++..+|+|.|+|.|.|
T Consensus 221 ~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 300 (317)
T 2y25_A 221 RARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKN 300 (317)
T ss_dssp SCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEE
T ss_pred CCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEe
Confidence 455544 35567899999999999999999999999999999987777666443 3446899999999999999999999
Q ss_pred C-CCceEEEEEEEEEecC
Q psy8425 88 V-HKDVVSAFAEVSINLR 104 (176)
Q Consensus 88 ~-g~~~~s~~~~l~V~~~ 104 (176)
. |....+ +.|.|..|
T Consensus 301 ~~g~~~~~--~~l~V~~P 316 (317)
T 2y25_A 301 KYGSETSD--FTVSVFIP 316 (317)
T ss_dssp TTEEEEEE--EEEEEECC
T ss_pred CCCeEEEE--EEEEEEcC
Confidence 9 777766 88888753
No 207
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.56 E-value=8.1e-14 Score=100.39 Aligned_cols=78 Identities=17% Similarity=0.262 Sum_probs=60.1
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--EE---e----------ccCcceEEEEe--cceEEEEEccc
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--VE---I----------TTNKRLKIQFK--KKRSTLIITRI 73 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~~---l----------~~~~~~~~~~~--~~~~~L~i~~v 73 (176)
..+...+..+.+.+|++++|.|.+.+.|.+.+.|+|.. .. + ....++.+... ....+|.|.++
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v 83 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASV 83 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSC
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCC
Confidence 45667778889999999999999999999999999832 11 1 11234444322 44678999999
Q ss_pred CCCCCEEEEEEEEcC
Q psy8425 74 RSEDAGRYECRGTGV 88 (176)
Q Consensus 74 ~~~d~G~Y~C~a~n~ 88 (176)
+.+|+|.|.|.+.|.
T Consensus 84 ~~~DsG~Y~C~~~~~ 98 (256)
T 3tf7_C 84 HRSDSAVYFCAVSAK 98 (256)
T ss_dssp CGGGCSEEEEEEECT
T ss_pred CcccCEEEEEEEecC
Confidence 999999999999987
No 208
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.56 E-value=1.6e-14 Score=105.52 Aligned_cols=95 Identities=17% Similarity=0.259 Sum_probs=72.7
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCe-eEEEeCCEEe----ccCcceEEE---EecceEEEEEcccCCCCCEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPA-VSWFKDNVEI----TTNKRLKIQ---FKKKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~-i~W~~~g~~l----~~~~~~~~~---~~~~~~~L~i~~v~~~d~G~ 80 (176)
.+|.+...+....+.+|+.+.|.|.+.|.|.|. +.|++++..+ .......+. .......|.|.++..+|+|.
T Consensus 187 ~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~ 266 (290)
T 2o26_X 187 AIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGV 266 (290)
T ss_dssp SCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEE
T ss_pred CCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeE
Confidence 688887777777899999999999999999996 9999998763 322222221 11345789999999999999
Q ss_pred EEEEEEcC-CCceEEEEEEEEEecCC
Q psy8425 81 YECRGTGV-HKDVVSAFAEVSINLRP 105 (176)
Q Consensus 81 Y~C~a~n~-g~~~~s~~~~l~V~~~p 105 (176)
|+|.|.|. |....+ +.|.|..+|
T Consensus 267 Y~C~a~N~~g~~~~~--~~l~V~~~P 290 (290)
T 2o26_X 267 FMCYANNTFGSANVT--TTLKVVEKG 290 (290)
T ss_dssp EEEEEECSSCEEEEE--EEECC----
T ss_pred EEEEEeCCCCcEEEE--EEEEEEeCC
Confidence 99999999 777666 888887765
No 209
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.56 E-value=5.2e-14 Score=99.97 Aligned_cols=75 Identities=15% Similarity=0.269 Sum_probs=56.1
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeC--CEEe---------------ccCcceEEEE-ecceEEEEEcccC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKD--NVEI---------------TTNKRLKIQF-KKKRSTLIITRIR 74 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~--g~~l---------------~~~~~~~~~~-~~~~~~L~i~~v~ 74 (176)
+...+..+.+.+|++++|.|. .+.|.+.+.|+|+ +..+ ....++.+.. .....+|.|.+++
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~ 81 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELAT 81 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCC
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCC
Confidence 455677889999999999999 7888899999995 2111 0123444432 1245689999999
Q ss_pred CCCCEEEEEEEEcC
Q psy8425 75 SEDAGRYECRGTGV 88 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~ 88 (176)
.+|+|.|.|.+.|.
T Consensus 82 ~~DsG~Y~C~~~~~ 95 (238)
T 2p1y_A 82 PSQTSVYFCASGDL 95 (238)
T ss_dssp GGGCEEEEEEEEC-
T ss_pred cccCeeEEEEEEeC
Confidence 99999999999987
No 210
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.55 E-value=3.6e-14 Score=97.83 Aligned_cols=90 Identities=16% Similarity=0.347 Sum_probs=75.3
Q ss_pred CCccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCC-eeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEE
Q psy8425 3 KGLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLP-AVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 81 (176)
..|.|..+|.+...+....+.+|+.+.|.|.+.|.|.| .+.|++++..+...... .....|.|.+++ |+|.|
T Consensus 99 ~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~-----~~~~~L~i~~~~--d~G~Y 171 (195)
T 2c5d_C 99 GYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH-----GPQRSLHVPGLN--KTSSF 171 (195)
T ss_dssp EEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS-----SCCEEEEECCCS--SCEEE
T ss_pred EEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc-----CCCCeEEEcccc--cCceE
Confidence 35677889999888888899999999999999999999 99999999988764332 356789999987 89999
Q ss_pred EEEEEcC-CCce-EEEEEEEEE
Q psy8425 82 ECRGTGV-HKDV-VSAFAEVSI 101 (176)
Q Consensus 82 ~C~a~n~-g~~~-~s~~~~l~V 101 (176)
+|.|.|. |... .. +.|.|
T Consensus 172 ~C~a~N~~g~~~s~~--~~l~V 191 (195)
T 2c5d_C 172 SCEAHNAKGVTTSRT--ATITV 191 (195)
T ss_dssp EEEEEETTEEEECCC--EEEEE
T ss_pred EEEEEcCCCceEEEE--EEEEE
Confidence 9999999 6553 45 77877
No 211
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.55 E-value=1.4e-13 Score=99.13 Aligned_cols=72 Identities=24% Similarity=0.395 Sum_probs=54.9
Q ss_pred CceeEEecCCcEEEEEEEeecC--CCeeEEEeC--CEE---ec-------------cCcceEEEEe--cceEEEEEcccC
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKD--NVE---IT-------------TNKRLKIQFK--KKRSTLIITRIR 74 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~--g~~---l~-------------~~~~~~~~~~--~~~~~L~i~~v~ 74 (176)
+..+.+.+|++++|.|.+.+.| .+.+.|+|+ +.. +. ...|+.+... ....+|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (257)
T 1f3r_B 7 SGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQ 86 (257)
T ss_dssp ECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCC
T ss_pred CCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCC
Confidence 3456799999999999999885 679999985 221 10 1245555432 345789999999
Q ss_pred CCCCEEEEEEEEcC
Q psy8425 75 SEDAGRYECRGTGV 88 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~ 88 (176)
.+|+|.|.|.+.|.
T Consensus 87 ~~DsG~Y~C~a~n~ 100 (257)
T 1f3r_B 87 TDDTGTYYCTRDLY 100 (257)
T ss_dssp TTCCEEEEEEEESS
T ss_pred cccCEEEEEEEccc
Confidence 99999999999997
No 212
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.55 E-value=7e-14 Score=100.40 Aligned_cols=79 Identities=19% Similarity=0.299 Sum_probs=61.4
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecC-----CCeeEEEeCC--EEe------------ccCcceEEEEecceEEEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNP-----LPAVSWFKDN--VEI------------TTNKRLKIQFKKKRSTLII 70 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p-----~p~i~W~~~g--~~l------------~~~~~~~~~~~~~~~~L~i 70 (176)
.+.+...+..+.+.+|++++|.|.+.+.| .+.+.|+|++ ..+ ....++.+.......+|.|
T Consensus 34 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 113 (252)
T 3bkj_L 34 DVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRI 113 (252)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEE
Confidence 45566667888999999999999999887 6899999954 111 0124555544455679999
Q ss_pred cccCCCCCEEEEEEEEcC
Q psy8425 71 TRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 71 ~~v~~~d~G~Y~C~a~n~ 88 (176)
.+++.+|+|.|.|.+.|.
T Consensus 114 ~~v~~~D~G~Y~C~~~~~ 131 (252)
T 3bkj_L 114 SRVEAEDLGVYYCFQASL 131 (252)
T ss_dssp SSCCGGGCEEEEEEECSB
T ss_pred CCCCcccCEEEEEEEEcC
Confidence 999999999999999987
No 213
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.55 E-value=5.4e-14 Score=110.75 Aligned_cols=87 Identities=16% Similarity=0.271 Sum_probs=62.3
Q ss_pred eCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--EEec------------cCcceEEEEecceEEEEEcccCCCCCEE
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--VEIT------------TNKRLKIQFKKKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~~l~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 80 (176)
..+..+.+.+|+.+.|.|.+.+.|.+.+.|+|++ ..+. ...++.........+|.|.+++.+|+|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 84 (523)
T 2rcj_C 5 TQPPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESD 84 (523)
T ss_pred ccCCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEE
Confidence 3456778999999999999999999999999974 2111 1134433322455689999999999999
Q ss_pred EEEEEEcC-CCc-eEEEEEEEEE
Q psy8425 81 YECRGTGV-HKD-VVSAFAEVSI 101 (176)
Q Consensus 81 Y~C~a~n~-g~~-~~s~~~~l~V 101 (176)
|+|.+.|. +.. .....+.|.|
T Consensus 85 Y~C~a~n~~g~~~~~~~~~~l~V 107 (523)
T 2rcj_C 85 YYCASWNSSDNSYVFGTGTKVTV 107 (523)
T ss_pred EEEEEccCCCccccccCceEEEe
Confidence 99999997 432 1111156666
No 214
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.55 E-value=2.3e-13 Score=98.15 Aligned_cols=91 Identities=16% Similarity=0.250 Sum_probs=62.8
Q ss_pred eCCceeEEecCCcEEEEEEEeecC--CCeeEEEeC--CEEec-----------------cCcceEEEEe--cceEEEEEc
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKD--NVEIT-----------------TNKRLKIQFK--KKRSTLIIT 71 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i~ 71 (176)
..+..+.+.+|++++|.|.+.+.| .+.+.|+|+ +..+. ...++.+... ....+|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (256)
T 1nqb_A 5 QQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLS 84 (256)
T ss_dssp EECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred ECCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEEC
Confidence 345567899999999999998875 578999984 22210 1245555432 345789999
Q ss_pred ccCCCCCEEEEEEEEcC-CC---ceEEEEEEEEEecCC
Q psy8425 72 RIRSEDAGRYECRGTGV-HK---DVVSAFAEVSINLRP 105 (176)
Q Consensus 72 ~v~~~d~G~Y~C~a~n~-g~---~~~s~~~~l~V~~~p 105 (176)
+++.+|+|.|.|.+.|. +. ......+.|.|..+|
T Consensus 85 ~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~ 122 (256)
T 1nqb_A 85 SLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDI 122 (256)
T ss_dssp SCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCC
T ss_pred cCChhhCEEEEEEEeeccCccceeEEcCceeeeecccc
Confidence 99999999999999998 52 122111566665433
No 215
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.55 E-value=1.4e-14 Score=103.65 Aligned_cols=90 Identities=16% Similarity=0.290 Sum_probs=63.6
Q ss_pred eCCceeEEecCCcEEEEEEEeecCCCe-----eEEEeCCEEeccC--------c-------ceEEE---EecceEEEEEc
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGNPLPA-----VSWFKDNVEITTN--------K-------RLKIQ---FKKKRSTLIIT 71 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~p~p~-----i~W~~~g~~l~~~--------~-------~~~~~---~~~~~~~L~i~ 71 (176)
..+..+.+.+|++++|.|.+.+.|.+. +.|++++...... . +..+. ....+.+|.|.
T Consensus 8 ~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 87 (248)
T 3pv7_A 8 MAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLP 87 (248)
T ss_dssp STTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEES
T ss_pred eCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeC
Confidence 455677899999999999999988876 9999963221100 0 00000 00223459999
Q ss_pred ccCCCCCEEEEEEEEcC-CCceEEEEEEEEEecCCC
Q psy8425 72 RIRSEDAGRYECRGTGV-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 72 ~v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p~ 106 (176)
+++.+|+|.|+|.+.+. +..... +.|.|..+|.
T Consensus 88 ~v~~~D~G~Y~C~~~~~~~~~~~~--~~L~V~~~P~ 121 (248)
T 3pv7_A 88 GIQLEEAGEYRCEVVVTPLKAQGT--VQLEVVASPA 121 (248)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEE--EEEEEEBCCE
T ss_pred CCCHHHCeEEEEEEEeCCccceeE--EEEEEecCCc
Confidence 99999999999999998 555555 8888887665
No 216
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.55 E-value=8.5e-14 Score=101.39 Aligned_cols=79 Identities=18% Similarity=0.304 Sum_probs=63.0
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCE-----Eec---------cCcceEEEEecceEEEEEcccCC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNV-----EIT---------TNKRLKIQFKKKRSTLIITRIRS 75 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~-----~l~---------~~~~~~~~~~~~~~~L~i~~v~~ 75 (176)
.+.+...+..+.+.+|++++|.|.+.+.|.+.+.|+|++. .+. ...++.+.......+|.|.+++.
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 91 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 91 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCCh
Confidence 4567777888899999999999999999999999998541 121 12455554445567899999999
Q ss_pred CCCEEEEEEEEcC
Q psy8425 76 EDAGRYECRGTGV 88 (176)
Q Consensus 76 ~d~G~Y~C~a~n~ 88 (176)
+|+|.|.|.+.|.
T Consensus 92 ~DsG~Y~C~~~n~ 104 (276)
T 3auv_A 92 EDFATYYCQQHYT 104 (276)
T ss_dssp GGCEEEEEEECSS
T ss_pred hhCEEEEEEEecC
Confidence 9999999999997
No 217
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.55 E-value=6.1e-15 Score=103.14 Aligned_cols=89 Identities=12% Similarity=0.059 Sum_probs=63.8
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEecc----CcceEEEEecceEEEEEcccCCCCCE
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITT----NKRLKIQFKKKRSTLIITRIRSEDAG 79 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~----~~~~~~~~~~~~~~L~i~~v~~~d~G 79 (176)
.|.|..||.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ..++.+........|.|.+++.+|+|
T Consensus 100 ~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G 179 (203)
T 4fa8_A 100 HLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHL 179 (203)
T ss_dssp EEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEECTTSCEEEEEEEEECSSCCC
T ss_pred EEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeCCCCEEEEEECCCCHHHCE
Confidence 46677788888888888899999999999999999999999987654432 22333221122234566789999999
Q ss_pred EEEEEEEcC-CCce
Q psy8425 80 RYECRGTGV-HKDV 92 (176)
Q Consensus 80 ~Y~C~a~n~-g~~~ 92 (176)
.|+|.|.|. |...
T Consensus 180 ~YtC~A~N~~G~a~ 193 (203)
T 4fa8_A 180 PVTCVGKNDKEEAH 193 (203)
T ss_dssp CEEEEEESSSCEEE
T ss_pred EEEEEEEcCCCEEE
Confidence 999999999 6543
No 218
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.54 E-value=5.1e-14 Score=97.07 Aligned_cols=88 Identities=27% Similarity=0.450 Sum_probs=72.4
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
.+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+....+ +. .....|.|.++..+|+|.|+|.|.|.
T Consensus 112 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~--~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~ 187 (201)
T 3s97_C 112 YPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAE--IS--TSGAVLKIFNIQLEDEGIYECEAENI 187 (201)
T ss_dssp EEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCE--EE--TTTTEEEECSCCGGGCEEEEEEEEET
T ss_pred CCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCcee--ec--CCCCEEEEccCChhhCEEEEEEEEec
Confidence 456666666678899999999999999999999999999987765322 21 45678999999999999999999999
Q ss_pred -CCceEEEEEEEEEe
Q psy8425 89 -HKDVVSAFAEVSIN 102 (176)
Q Consensus 89 -g~~~~s~~~~l~V~ 102 (176)
|....+ +.|.|+
T Consensus 188 ~g~~~~~--~~l~V~ 200 (201)
T 3s97_C 188 RGKDKHQ--ARIYVQ 200 (201)
T ss_dssp TEEEEEE--EEEEEE
T ss_pred CCceeee--EEEEEe
Confidence 777666 778775
No 219
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.54 E-value=5.4e-15 Score=104.33 Aligned_cols=89 Identities=18% Similarity=0.279 Sum_probs=63.3
Q ss_pred eCCceeEEecCCcEEEEEEEeecCC-CeeEEEeCCEEec---------cCcce--EEE----------EecceEEEEEcc
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGNPL-PAVSWFKDNVEIT---------TNKRL--KIQ----------FKKKRSTLIITR 72 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~p~-p~i~W~~~g~~l~---------~~~~~--~~~----------~~~~~~~L~i~~ 72 (176)
..+.++.+.+|+.+.|.|.+.+.|. +.+.|++++.... ....+ ++. . ...+.|.|.+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-~~~~~L~i~~ 83 (231)
T 2pet_A 5 SVPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQL-DSQGRLVLAE 83 (231)
T ss_dssp CCCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEE-CTTCCEEESS
T ss_pred cCCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCcccccccccccccccccc-CCCceEEEcc
Confidence 3456778999999999999999885 8999998543211 01111 121 2 2334599999
Q ss_pred cCCCCCEEEEEEEEcC--CCceEEEEEEEEEecCCC
Q psy8425 73 IRSEDAGRYECRGTGV--HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n~--g~~~~s~~~~l~V~~~p~ 106 (176)
++.+|+|.|.|.+.+. +..... +.|.|..+|.
T Consensus 84 v~~~D~G~Y~C~~~~~~~~~~~~~--~~l~V~~~p~ 117 (231)
T 2pet_A 84 AQVGDERDYVCVVRAGAAGTAEAT--ARLNVFAKPE 117 (231)
T ss_dssp CCGGGCEEEEEEEECGGGCEEEEE--EEEEEEBCCC
T ss_pred cCcccCceEEEEEEecCCCceEEE--EEEEEEecCC
Confidence 9999999999999998 333333 8888887654
No 220
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.54 E-value=3.3e-14 Score=99.84 Aligned_cols=88 Identities=14% Similarity=0.258 Sum_probs=61.2
Q ss_pred CCceeEEecCCcEEEEEEEeecC--CCeeEEEeC--CEEec-----------------cCcceEEEEe--cceEEEEEcc
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKD--NVEIT-----------------TNKRLKIQFK--KKRSTLIITR 72 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i~~ 72 (176)
.+..+.+.+|++++|.|.+.+.| .+.+.|+|+ +..+. ...|+.+... ....+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (219)
T 1c1e_H 6 QSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINN 85 (219)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECS
T ss_pred CCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECC
Confidence 35567899999999999999865 678999996 33221 1234444332 2357899999
Q ss_pred cCCCCCEEEEEEEEcC-CCc--eEEEEEEEEEec
Q psy8425 73 IRSEDAGRYECRGTGV-HKD--VVSAFAEVSINL 103 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n~-g~~--~~s~~~~l~V~~ 103 (176)
++.+|+|.|.|.+.|. +.. .....+.|.|..
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 119 (219)
T 1c1e_H 86 LKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSS 119 (219)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEEECCCEEEEECC
T ss_pred CCcccCEEEEEEEeccCcccceeecCceEEEEec
Confidence 9999999999999997 321 111125666654
No 221
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.54 E-value=1.3e-13 Score=110.18 Aligned_cols=91 Identities=21% Similarity=0.369 Sum_probs=83.5
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
.+|.+...+.+..+.+|+++.|.|.+.|.|.|.+.|+|+++++..+.++.+.......+|.|.++..+|+|.|+|.|.|.
T Consensus 481 ~~P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N~ 560 (573)
T 3uto_A 481 AQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNS 560 (573)
T ss_dssp GSCEEEECCCCEEECTTSCEEEEEEEECSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred cCCccccCCCCcEEeCCCcEEEEEEEEccCCCeEEEEECCEEcccCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEEeC
Confidence 46888888889999999999999999999999999999999999988998888888899999999999999999999999
Q ss_pred -CCceEEEEEEEEE
Q psy8425 89 -HKDVVSAFAEVSI 101 (176)
Q Consensus 89 -g~~~~s~~~~l~V 101 (176)
|...+. +.|.|
T Consensus 561 ~G~~~~~--v~l~V 572 (573)
T 3uto_A 561 YGTKEEI--VFLNV 572 (573)
T ss_dssp TEEEEEE--EEEEE
T ss_pred CCcEEEE--EEEEE
Confidence 877777 77766
No 222
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.54 E-value=1.1e-14 Score=100.94 Aligned_cols=85 Identities=19% Similarity=0.329 Sum_probs=62.0
Q ss_pred eeEEecCCcEEEEEEEe----ecCCCeeEEEeCCEEecc------------CcceEEEEecceEEEEEcccCCCCCEEEE
Q psy8425 19 NVSVKLRQSLRLVCRCK----GNPLPAVSWFKDNVEITT------------NKRLKIQFKKKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 19 ~~~v~~G~~~~l~C~~~----g~p~p~i~W~~~g~~l~~------------~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 82 (176)
.+.+.+|+++.|.|.+. +.|.+.+.|++++..+.. ..+..+. .....+|.|.+++.+|+|.|.
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~-~~~~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFD-ITNNLSIVILALRPSDEGTYE 81 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEE-STTTTEEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEc-cCCCcEEEEecccchhCeEEE
Confidence 46789999999999985 457789999999987631 1122221 134568999999999999999
Q ss_pred EEEEcC-CCceE---EEEEEEEEecC
Q psy8425 83 CRGTGV-HKDVV---SAFAEVSINLR 104 (176)
Q Consensus 83 C~a~n~-g~~~~---s~~~~l~V~~~ 104 (176)
|.+.|. +.... ...+.|.|..+
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~ 107 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKAD 107 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECC
T ss_pred EEEEcCCCCccccccccEEEEEEcCC
Confidence 999997 54432 22277777765
No 223
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.54 E-value=3.5e-14 Score=99.28 Aligned_cols=91 Identities=23% Similarity=0.522 Sum_probs=72.4
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccC-cceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTN-KRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV- 88 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~- 88 (176)
|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... .++.+ ..+.|.|.++..+|+|.|+|.|.|.
T Consensus 111 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~N~~ 186 (212)
T 2yd1_A 111 PVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSL----KDGFLQIENSREEDQGKYECVAENSM 186 (212)
T ss_dssp CEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEE----ETTEEEECSCCGGGCEEEEEEEEETT
T ss_pred CeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEc----cCCeEEEccCChhhCEEEEEEeecCC
Confidence 77887788888999999999999999999999999999998763 33322 2348999999999999999999999
Q ss_pred CCceEEEEEEEEEecCCC
Q psy8425 89 HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 89 g~~~~s~~~~l~V~~~p~ 106 (176)
|.... ..+.|.|..++.
T Consensus 187 G~~~s-~~~~l~V~~~~~ 203 (212)
T 2yd1_A 187 GTEHS-KATNLYVKVRRV 203 (212)
T ss_dssp EEEEC-CCEEEEEEC---
T ss_pred CceeE-EEEEEEEEeccc
Confidence 55432 227888887543
No 224
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.54 E-value=3.2e-14 Score=107.72 Aligned_cols=86 Identities=28% Similarity=0.432 Sum_probs=74.6
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEE
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 83 (176)
.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+... ...|.|.++..+|+|.|+|
T Consensus 301 ~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~----------~~~L~i~~v~~~d~G~Y~C 370 (388)
T 2v5m_A 301 VLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS----------ESVLRIESVKKEDKGMYQC 370 (388)
T ss_dssp EEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCC----------SSEEEESSCCGGGCEEEEE
T ss_pred EEEEeCCCccccCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECccC----------CCEEEEecCChhhCEEEEE
Confidence 466777888877788888999999999999999999999999999988652 3589999999999999999
Q ss_pred EEEcC-CCceEEEEEEEEE
Q psy8425 84 RGTGV-HKDVVSAFAEVSI 101 (176)
Q Consensus 84 ~a~n~-g~~~~s~~~~l~V 101 (176)
.|.|. |....+ +.|.|
T Consensus 371 ~a~N~~G~~~~~--~~l~V 387 (388)
T 2v5m_A 371 FVRNDRESAEAS--AELKL 387 (388)
T ss_dssp EEECSSCEEEEE--EEEEE
T ss_pred EEEcCCCcEEEE--EEEEe
Confidence 99999 877776 77765
No 225
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.53 E-value=7.9e-14 Score=92.27 Aligned_cols=92 Identities=14% Similarity=0.251 Sum_probs=70.0
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeecCCCeeEEE---------eCCEEeccCcceEEE-EecceEEEEEcccCCCCCEEE
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWF---------KDNVEITTNKRLKIQ-FKKKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~---------~~g~~l~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y 81 (176)
.+...+..+.+.+|++++|.|.+.+.|.+.+.|+ +++..+. ..++.+. ......+|.|.+++.+|+|.|
T Consensus 40 ~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~-~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y 118 (145)
T 1z9m_A 40 DSQPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALR-DNRIQLVTSTPHELSISISNVALADEGEY 118 (145)
T ss_dssp TTCCBCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSC-CTTEEEEEECSSEEEEEECSCCGGGCEEE
T ss_pred ceecCCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecc-cCCEEEecCCCCeEEEEECCCChhhCEEE
Confidence 3345577889999999999999999998999999 4443333 2454432 224467899999999999999
Q ss_pred EEEEEcCCCceEEEEEEEEEecCCC
Q psy8425 82 ECRGTGVHKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 82 ~C~a~n~g~~~~s~~~~l~V~~~p~ 106 (176)
+|.+.|.+..... +.|.|..+|.
T Consensus 119 ~C~~~n~~~~~~~--~~L~V~~~P~ 141 (145)
T 1z9m_A 119 TCSIFTMPVRTAK--SLVTVLGIPQ 141 (145)
T ss_dssp EEEECSSSCEEEE--EEEEEECCCC
T ss_pred EEEEEcCCCceEE--EEEEEEeCCC
Confidence 9999998433444 8899988765
No 226
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.53 E-value=2.2e-15 Score=116.43 Aligned_cols=126 Identities=18% Similarity=0.298 Sum_probs=76.3
Q ss_pred ccccC--CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEE
Q psy8425 5 LRATI--HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 5 l~v~~--~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 82 (176)
|.|.. +|.+... ...+.+|+.+.|.|.+. |.|.+.| +|..+... .....|.|.++..+|+|.|+
T Consensus 278 l~V~~~~~p~i~~~--~~~v~~G~~v~l~C~~~--p~p~i~W--~g~~~~~~--------~~~~~L~i~~~~~~d~G~Y~ 343 (450)
T 1z7z_I 278 VTIYSFPAPNVILT--KPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPL--------GPRAQLLLKATPEDNGRSFS 343 (450)
T ss_dssp EEEECCCCCEEEES--CSEEETTCEEEEEEEC----------------------------CCCCCEEEECCGGGTTCEEE
T ss_pred EEEecCCCCeEecC--CeeEeCCCcEEEEEecC--CCCEeEE--CCEEcCCC--------CceEEEEEecCcccCCceEE
Confidence 44544 5655433 45789999999999987 8889999 77776321 23357999999999999999
Q ss_pred EEEEcC-CCce--EEEEEEEEEecCCC-----------------------CCCCCCCCCeEEecCC-------EEEE-ec
Q psy8425 83 CRGTGV-HKDV--VSAFAEVSINLRPD-----------------------NMGGPCPLDSYCLNGG-------SCTY-YD 128 (176)
Q Consensus 83 C~a~n~-g~~~--~s~~~~l~V~~~p~-----------------------~~g~p~p~~~~~~~~~-------~~~i-~~ 128 (176)
|.|.|. ++.. .+..+.|.|..+|. +.|.|.|...|..++. .+.+ .+
T Consensus 344 C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~~g~~~~v~~~ 423 (450)
T 1z7z_I 344 CSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRD 423 (450)
T ss_dssp EEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTTSCEECCGG
T ss_pred EEEEcCCCCcccccceeEEEEEecCCceeeccCCCceeEcCCCeEEEEEecccCCCCcEEEEECCcccCCCCCeEeEehh
Confidence 999986 5321 12227888877654 3345555444444443 1222 68
Q ss_pred cCCeeEEEecCCcccCc
Q psy8425 129 TVGELVCQCAEGYKGQR 145 (176)
Q Consensus 129 d~g~y~C~~~~n~~g~~ 145 (176)
|+|.|.|. |.|..|..
T Consensus 424 d~G~Y~C~-a~N~~G~~ 439 (450)
T 1z7z_I 424 LEGTYLCR-ARSTQGEV 439 (450)
T ss_dssp GCEEEEEE-EEETTEEE
T ss_pred hCeEEEEE-EEeCCCce
Confidence 99999999 99999865
No 227
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.53 E-value=5.9e-14 Score=102.31 Aligned_cols=97 Identities=20% Similarity=0.240 Sum_probs=73.1
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEE-----ecceEEEEEcccCCCCCEEEEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQF-----KKKRSTLIITRIRSEDAGRYECR 84 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~-----~~~~~~L~i~~v~~~d~G~Y~C~ 84 (176)
+|.+...+....+.+|+++.|.|.+.|.|.|.+.|++++............. .....+|.|.++..+|+|.|+|.
T Consensus 181 ~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 260 (289)
T 3mjg_X 181 SINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCN 260 (289)
T ss_dssp CCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEE
T ss_pred CCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEE
Confidence 6666665566779999999999999999999999998775443211111111 12447899999999999999999
Q ss_pred EEcC-CCceEEEEEEEEEecCCCCC
Q psy8425 85 GTGV-HKDVVSAFAEVSINLRPDNM 108 (176)
Q Consensus 85 a~n~-g~~~~s~~~~l~V~~~p~~~ 108 (176)
|.|. |....+ +.|.|...|...
T Consensus 261 a~N~~G~~~~~--~~l~v~~~~~~~ 283 (289)
T 3mjg_X 261 VTESVNDHQDE--KAINITVVESGH 283 (289)
T ss_dssp EEETTTTEEEE--EEEEEEEEC---
T ss_pred eecCCCCceeE--EEEEEEEEecCc
Confidence 9999 888888 888888766543
No 228
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.53 E-value=5.7e-14 Score=103.92 Aligned_cols=92 Identities=13% Similarity=0.157 Sum_probs=64.5
Q ss_pred cccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEE
Q psy8425 6 RATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRG 85 (176)
Q Consensus 6 ~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 85 (176)
.+..+|.|...+. ..+.+|++++|.|.+.+. .+.+.|+|+|..+...... ......|.|.+++.+|+|.|+|.|
T Consensus 20 ~~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~~----~~~~~~L~I~~v~~~D~G~Y~C~a 93 (316)
T 3vh8_G 20 GGQDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFHG----RIFQESFNMSPVTTAHAGNYTCRG 93 (316)
T ss_dssp ----CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHHH----CCBSSCEEECSCCGGGCEEEEEEE
T ss_pred CCCCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCccceeecC----CcceEEEEECCCCcccCeEEEEEE
Confidence 3456888887776 568899999999999887 6789999999876432110 134568999999999999999999
Q ss_pred EcC-C---CceEEEEEEEEEec
Q psy8425 86 TGV-H---KDVVSAFAEVSINL 103 (176)
Q Consensus 86 ~n~-g---~~~~s~~~~l~V~~ 103 (176)
.|. + ....+..+.|.|..
T Consensus 94 ~~~~~~~~~~~~s~~~~l~V~~ 115 (316)
T 3vh8_G 94 SHPHSPTGWSAPSNPVVIMVTG 115 (316)
T ss_dssp BCSSSSSSBCCCCCCEEEEEEC
T ss_pred EcCCCCcceecCCCcEEEEEec
Confidence 864 1 11222226666654
No 229
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.53 E-value=1.9e-13 Score=93.62 Aligned_cols=96 Identities=23% Similarity=0.459 Sum_probs=74.0
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeC--CEEecc-----CcceEEEEecceEEEEEcccCCC
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKD--NVEITT-----NKRLKIQFKKKRSTLIITRIRSE 76 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~--g~~l~~-----~~~~~~~~~~~~~~L~i~~v~~~ 76 (176)
.|.|..+|.+...+ ...+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.. ..++.+........|.|.++..+
T Consensus 89 ~l~V~~~p~~~~~~-~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 167 (192)
T 2va4_A 89 FLQVFVQPHIIQLK-NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLS 167 (192)
T ss_dssp EEEEEEEEEEEEEC-CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGG
T ss_pred EEEEEccCcccccC-cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcc
Confidence 35566677765543 45677899999999999999999999998 666643 23444444456689999999999
Q ss_pred CCEEEEEEEEcC-CCceEEEEEEEEEe
Q psy8425 77 DAGRYECRGTGV-HKDVVSAFAEVSIN 102 (176)
Q Consensus 77 d~G~Y~C~a~n~-g~~~~s~~~~l~V~ 102 (176)
|+|.|+|.|.|. |....+ +.|.|+
T Consensus 168 d~G~Y~C~a~n~~g~~~~~--~~l~V~ 192 (192)
T 2va4_A 168 DSGRYDCEAASRIGGHQKS--MYLDIE 192 (192)
T ss_dssp GCEEEEEEEECSSCEEEEE--EEEEEC
T ss_pred cCEEEEEEEEecCCceEEE--EEEEeC
Confidence 999999999999 776666 777663
No 230
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.53 E-value=1.8e-15 Score=112.58 Aligned_cols=84 Identities=19% Similarity=0.381 Sum_probs=0.0
Q ss_pred EeCCceeEEecCCcEEEEEEEeec-CCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcCCCce
Q psy8425 14 VSGLRNVSVKLRQSLRLVCRCKGN-PLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGVHKDV 92 (176)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~~~g~-p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~g~~~ 92 (176)
+..+.+..+.+|+.+.|.|.+.+. |.+.+.|+|+|..+....++.+ ....|.|.+++.+|+|.|+|.+.|.+...
T Consensus 12 ~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~ 87 (334)
T 1ry7_B 12 PGQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLV----GPQRLQVLNASHEDSGAYSCRQRLTQRVL 87 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEe----ccceEEEeecccccCEEEEEEEEeCCeEE
Confidence 334778889999999999999887 6789999999998876554433 35689999999999999999999874333
Q ss_pred EEEEEEEEEec
Q psy8425 93 VSAFAEVSINL 103 (176)
Q Consensus 93 ~s~~~~l~V~~ 103 (176)
.. +.|.|..
T Consensus 88 ~~--~~l~V~~ 96 (334)
T 1ry7_B 88 CH--FSVRVTD 96 (334)
T ss_dssp -----------
T ss_pred EE--EEEEEec
Confidence 33 5566553
No 231
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.52 E-value=1.4e-13 Score=98.75 Aligned_cols=94 Identities=12% Similarity=0.099 Sum_probs=66.3
Q ss_pred ccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 7 ATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 7 v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
...+|.+...+.. .+.+|++++|.|.+.+ +.+.+.|+|+|..+..... ..........|.|.+++.+|+|.|+|.+.
T Consensus 4 ~~~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 80 (242)
T 1p6f_A 4 TLPKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSCIYR 80 (242)
T ss_dssp CCCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC-SSCTTCCEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccc-cccCCcceeEEEecCCCcccCeEEEEEEe
Confidence 3457888777766 7899999999999874 4568999999987642100 00001346789999999999999999998
Q ss_pred cC-CCceEEEEEEEEEec
Q psy8425 87 GV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~~ 103 (176)
|. +....+..+.|.|..
T Consensus 81 ~~~~~s~~S~~~~L~V~~ 98 (242)
T 1p6f_A 81 VGELWSEPSNLLDLVVTE 98 (242)
T ss_dssp ETTEECCCCCCEEEEEEC
T ss_pred cCCccccCCcceEEEeec
Confidence 86 433223336677764
No 232
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.52 E-value=4.8e-14 Score=98.00 Aligned_cols=91 Identities=23% Similarity=0.373 Sum_probs=69.2
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcCCC
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGVHK 90 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~g~ 90 (176)
|.+...... +.+|+.+.|.|.+.+.| |.+.|+++|..+....++.+. ..+.+|.|.++..+|+|.|+|.|.|..+
T Consensus 113 p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~g 187 (208)
T 3r4d_A 113 PFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLS--QNNSILRIDPIKREDAGEYQCEISNPVS 187 (208)
T ss_dssp CEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEE--TTTTEEEESSCCGGGCEEEEEEEECTTC
T ss_pred CEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEc--CCCCEEEEeccCHHhCeEEEEEEecCCC
Confidence 555444444 88999999999999876 899999999999876665443 4557899999999999999999999933
Q ss_pred ceEEEEEEEEEecCCC
Q psy8425 91 DVVSAFAEVSINLRPD 106 (176)
Q Consensus 91 ~~~s~~~~l~V~~~p~ 106 (176)
...+..+.|.|..+|.
T Consensus 188 ~~~s~~~~l~v~~~~~ 203 (208)
T 3r4d_A 188 VRRSNSIKLDIIFDPH 203 (208)
T ss_dssp CEECCCEEECCC----
T ss_pred cccCCceeeeEEeCCc
Confidence 3445458888877664
No 233
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.52 E-value=1.4e-13 Score=93.74 Aligned_cols=87 Identities=18% Similarity=0.365 Sum_probs=72.1
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCC-eeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEE
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLP-AVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 82 (176)
.|.|..+|.+...+....+.+|+.+.|.|.+.|.|.| .+.|++++..+.... .....|.|.++ +|+|.|+
T Consensus 92 ~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~-------~~~~~L~i~~~--~d~G~Y~ 162 (182)
T 1rhf_A 92 WLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPA-------PSPSVLNVTGV--TQSTMFS 162 (182)
T ss_dssp EEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSE-------ESSEEEEECCC--SSCEEEE
T ss_pred EEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCC-------CCceEEEEecc--ccCeEEE
Confidence 4667789999888888899999999999999999999 999999999886532 15578999988 5899999
Q ss_pred EEEEcC-CCce-EEEEEEEEE
Q psy8425 83 CRGTGV-HKDV-VSAFAEVSI 101 (176)
Q Consensus 83 C~a~n~-g~~~-~s~~~~l~V 101 (176)
|.|.|. |... .+ +.|.|
T Consensus 163 C~a~N~~g~~~s~~--~~l~V 181 (182)
T 1rhf_A 163 CEAHNLKGLASSRT--ATVHL 181 (182)
T ss_dssp EEEEETTEEEECCC--EEEEE
T ss_pred EEEECCCCCcccce--EEEEe
Confidence 999999 6543 24 66666
No 234
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.51 E-value=2.8e-14 Score=99.18 Aligned_cols=100 Identities=23% Similarity=0.371 Sum_probs=73.7
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEE-EeecCCCeeEEEeCCE-EeccCcce-------EEEEecceEEEEEcccC
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCR-CKGNPLPAVSWFKDNV-EITTNKRL-------KIQFKKKRSTLIITRIR 74 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~-~~g~p~p~i~W~~~g~-~l~~~~~~-------~~~~~~~~~~L~i~~v~ 74 (176)
.|.|..+|.+...+....+.+|+.+.|.|. +.+.|.|.+.|++++. .+...... ..........|.|.++.
T Consensus 98 ~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 177 (212)
T 1f97_A 98 HLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVT 177 (212)
T ss_dssp EEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCC
T ss_pred EEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecCCCceEEEEecC
Confidence 355666776654455567899999999999 7999999999999999 77653321 12222456789999999
Q ss_pred CCCCEEEEEEEEcC-CCceEEEEEEEEEec
Q psy8425 75 SEDAGRYECRGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~ 103 (176)
.+|+|.|+|.|.|. |....+..+.|.|..
T Consensus 178 ~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 178 AFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp GGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred hhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 99999999999999 776444336777664
No 235
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.51 E-value=8.8e-14 Score=96.66 Aligned_cols=95 Identities=16% Similarity=0.172 Sum_probs=64.6
Q ss_pred ccCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcce-EEEEecceEEEEEcccCCCCCEEEEEEE
Q psy8425 7 ATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRL-KIQFKKKRSTLIITRIRSEDAGRYECRG 85 (176)
Q Consensus 7 v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 85 (176)
+..+|.+...+. ..+.+|++++|.|.+. .+.+.+.|+|+|..+...... ..........|.|.+++.+|+|.|+|.+
T Consensus 5 ~~~~P~i~~~p~-~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a 82 (201)
T 1nkr_A 5 VHRKPSLLAHPG-PLVKSEETVILQCWSD-VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYG 82 (201)
T ss_dssp --CCCEEEEESC-SEEETTCCEEEEEEES-SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEE
T ss_pred cCCCCeEEEEcC-CccCCCCcEEEEEecc-CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeE
Confidence 345777776665 6789999999999987 477899999998765431110 0111124578999999999999999999
Q ss_pred EcC-C---CceEEEEEEEEEec
Q psy8425 86 TGV-H---KDVVSAFAEVSINL 103 (176)
Q Consensus 86 ~n~-g---~~~~s~~~~l~V~~ 103 (176)
.|. . ....+..+.|.|..
T Consensus 83 ~~~~~~~~~~~~s~~~~l~V~~ 104 (201)
T 1nkr_A 83 SVTHSPYQVSAPSDPLDIVIIG 104 (201)
T ss_dssp EBTTBTTCCCCCCCCEEEEEEC
T ss_pred ecCCCCccccCCCCCEEEEeec
Confidence 864 2 11222226677764
No 236
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.51 E-value=2.2e-14 Score=108.09 Aligned_cols=74 Identities=16% Similarity=0.177 Sum_probs=59.9
Q ss_pred eEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CCceEEEEEE
Q psy8425 20 VSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HKDVVSAFAE 98 (176)
Q Consensus 20 ~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~s~~~~ 98 (176)
..+.+|+++.|.|.+.+.|.|.+.|++++..+. .....|.|.++..+|+|.|+|.|.|. +..... +.
T Consensus 106 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~----------~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~--~~ 173 (363)
T 1wio_A 106 THLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI----------QGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFK--ID 173 (363)
T ss_dssp SSEESBSCEEEEEECCTTCCCCEEEECSSSCEE----------EESSEEEECSBCGGGCEECEEEEEETTEEEEEC--CE
T ss_pred eEEecCCCEEEEEEcCCCCCCeEEEEcCCCccc----------ccceEEEEeeCChhcCCEEEEEEecCCCeEEEE--EE
Confidence 357899999999999999999999999875432 23468999999999999999999998 444444 67
Q ss_pred EEEecCC
Q psy8425 99 VSINLRP 105 (176)
Q Consensus 99 l~V~~~p 105 (176)
|.|..+|
T Consensus 174 l~v~~~p 180 (363)
T 1wio_A 174 IVVLAFQ 180 (363)
T ss_dssp ECEECCS
T ss_pred EEEecCC
Confidence 7777655
No 237
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.51 E-value=3.1e-13 Score=96.51 Aligned_cols=77 Identities=19% Similarity=0.311 Sum_probs=60.3
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEe----------------CCEEeccC---cceEEEEe-cceEEEEEc
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFK----------------DNVEITTN---KRLKIQFK-KKRSTLIIT 71 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~----------------~g~~l~~~---~~~~~~~~-~~~~~L~i~ 71 (176)
.+...+..+.+.+|+++.|.|.+.+.+.+.+.|+| ++...... .++.+... ....+|.|.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 82 (246)
T 4dzb_B 3 VVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVT 82 (246)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEEC
T ss_pred ccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEEC
Confidence 45666778899999999999999999999999998 33333221 45554432 446789999
Q ss_pred ccCCCCCEEEEEEEEcC
Q psy8425 72 RIRSEDAGRYECRGTGV 88 (176)
Q Consensus 72 ~v~~~d~G~Y~C~a~n~ 88 (176)
+++.+|+|.|.|.+.+.
T Consensus 83 ~v~~~D~G~Y~C~~~~~ 99 (246)
T 4dzb_B 83 SAHPEDSSFYICSARTS 99 (246)
T ss_dssp SCCGGGCEEEEEEECCS
T ss_pred CCCHHHCEEEEEEEecC
Confidence 99999999999999875
No 238
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.51 E-value=1.2e-13 Score=94.69 Aligned_cols=123 Identities=16% Similarity=0.162 Sum_probs=83.9
Q ss_pred CceeEEecCCcEEEEEEEee-cCCCeeEEEeC-CEEec------------cC--cceEEEEecceEEEEEcccCCCCCEE
Q psy8425 17 LRNVSVKLRQSLRLVCRCKG-NPLPAVSWFKD-NVEIT------------TN--KRLKIQFKKKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g-~p~p~i~W~~~-g~~l~------------~~--~~~~~~~~~~~~~L~i~~v~~~d~G~ 80 (176)
...+.+.+|++++|.|.+.+ .+.+.+.|+|+ +..+. .. .|+. +...+++|.|.+++.+|+|.
T Consensus 6 ~~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~--l~~~~~sL~I~~v~~~D~G~ 83 (180)
T 2dru_A 6 VPNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVD--LDKTNGALRIYNVSKEDRGD 83 (180)
T ss_dssp CCEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEE--ECTTTCCEEECSCCGGGCEE
T ss_pred cceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEE--EeCCCccEEEcCCCHHHCeE
Confidence 34678999999999998754 34679999994 32221 11 2332 22456789999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEEecCCC----------------C-CCCCCCCCeEEecCC--------EEEE--eccCCee
Q psy8425 81 YECRGTGVHKDVVSAFAEVSINLRPD----------------N-MGGPCPLDSYCLNGG--------SCTY--YDTVGEL 133 (176)
Q Consensus 81 Y~C~a~n~g~~~~s~~~~l~V~~~p~----------------~-~g~p~p~~~~~~~~~--------~~~i--~~d~g~y 133 (176)
|.|.+.+.. .....+.|.|.+++. + .| |.|...+..++. ++.+ .+|+|.|
T Consensus 84 Y~C~v~~~~--~~~~~~~L~V~~~~~~P~i~~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~~~~~~l~~~~~~d~g~Y 160 (180)
T 2dru_A 84 YYMRMLHET--EDQWKITMEVYEMVSKPMIYWECSNATLTCEVLEG-TDVELKLYQGKEHLRSLRQKTMSYQWTNLRAPF 160 (180)
T ss_dssp EEEEEESSS--EEEEEEEEEEECCCCCCEEEEEGGGTEEEEECSSC-TTCEEEEEETTEEEEEESSSEEEEECSCCSSCE
T ss_pred EEEEEEcCC--eEEEEEEEEEECCCCCCEEEecCCCEEEEEEeCCC-CCCEEEEEECCeECcCCCCCEEEEEEhhcCccE
Confidence 999998765 223337888876532 3 44 665445554443 3333 4799999
Q ss_pred EEEecCCcccCc
Q psy8425 134 VCQCAEGYKGQR 145 (176)
Q Consensus 134 ~C~~~~n~~g~~ 145 (176)
+|. |.|..|..
T Consensus 161 ~C~-a~N~~~~~ 171 (180)
T 2dru_A 161 KCK-AVNRVSQE 171 (180)
T ss_dssp EEE-EEETTEEE
T ss_pred EEE-EecCcCcc
Confidence 999 88887753
No 239
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.51 E-value=6.4e-15 Score=108.46 Aligned_cols=96 Identities=16% Similarity=0.191 Sum_probs=75.9
Q ss_pred CccccCCCeEEeC-CceeEEecCCcEEEEEEEeecCCC-eeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEE
Q psy8425 4 GLRATIHPIEVSG-LRNVSVKLRQSLRLVCRCKGNPLP-AVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 4 ~l~v~~~p~~~~~-~~~~~v~~G~~~~l~C~~~g~p~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 81 (176)
.|.|..+|.+... .....+.+|+.+.|.|.+.|.|.| .+.|+|++..+...... ..+..|.|.++..+|+|.|
T Consensus 205 ~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~~-----~~~~~l~i~~v~~~d~G~Y 279 (308)
T 4fom_A 205 ILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLLA-----SDNTLHFVHPLTFNYSGVY 279 (308)
T ss_dssp ECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCBC-----STTEEECCSCCCSCCCSEE
T ss_pred EEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEEE-----cCCeEEEECCCChhhCEEE
Confidence 4567777877544 344567788999999999999999 69999999877653211 3455677899999999999
Q ss_pred EEEEEcC-CCceEEEEEEEEEecCCC
Q psy8425 82 ECRGTGV-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 82 ~C~a~n~-g~~~~s~~~~l~V~~~p~ 106 (176)
+|.|.|. |....+ +.|.|.++|.
T Consensus 280 ~C~A~N~~G~~~~~--~~l~V~~~P~ 303 (308)
T 4fom_A 280 ICKVTNSLGQRSDQ--KVIYISDPPH 303 (308)
T ss_dssp EEEEEETTEEEEEE--EECCEECCC-
T ss_pred EEEEEeCCCcEEEE--EEEEEEcCCC
Confidence 9999999 877777 9999999886
No 240
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.51 E-value=1.7e-14 Score=111.50 Aligned_cols=83 Identities=16% Similarity=0.196 Sum_probs=66.5
Q ss_pred CCccccCCCeEE-eCCceeEEecCCcEEEEEEEeecCCC---eeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCC
Q psy8425 3 KGLRATIHPIEV-SGLRNVSVKLRQSLRLVCRCKGNPLP---AVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDA 78 (176)
Q Consensus 3 ~~l~v~~~p~~~-~~~~~~~v~~G~~~~l~C~~~g~p~p---~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~ 78 (176)
..|.|..+|.+. ..+.+..+.+|+.+.|.|.+.+.|.+ .+.|+|+|..+....... ......|.|.+++.+|+
T Consensus 78 ~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~---~~~~~~L~i~~~~~~d~ 154 (450)
T 1z7z_I 78 TFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVG---EPAEVTTTVLVRRDHHG 154 (450)
T ss_dssp CEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCT---TTEEEEEEEECCSSCSS
T ss_pred EEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccc---cccceEEEEEeeccccC
Confidence 346667777765 55666889999999999999999888 899999999886532111 13356899999999999
Q ss_pred EEEEEEEEcC
Q psy8425 79 GRYECRGTGV 88 (176)
Q Consensus 79 G~Y~C~a~n~ 88 (176)
|.|+|.|.|.
T Consensus 155 G~Y~C~a~n~ 164 (450)
T 1z7z_I 155 ANFSCRTELD 164 (450)
T ss_dssp CEEEEEEEEE
T ss_pred ceEEEEEEcc
Confidence 9999999998
No 241
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.51 E-value=3.5e-13 Score=96.35 Aligned_cols=90 Identities=18% Similarity=0.250 Sum_probs=64.7
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeecC-----CCeeEEEeCC--EE---ec---------cCcceEEEEecceEEEEEcc
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGNP-----LPAVSWFKDN--VE---IT---------TNKRLKIQFKKKRSTLIITR 72 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~p-----~p~i~W~~~g--~~---l~---------~~~~~~~~~~~~~~~L~i~~ 72 (176)
.+...+..+.+.+|++++|.|.+.+.| .+.+.|+|+. .. +. ...++.+.......+|.|.+
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 82 (247)
T 1svz_A 3 LMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISR 82 (247)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred cEEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECC
Confidence 355667788999999999999999887 6899999842 21 11 13455554445567899999
Q ss_pred cCCCCCEEEEEEEEcC-CCce-EEEEEEEEEec
Q psy8425 73 IRSEDAGRYECRGTGV-HKDV-VSAFAEVSINL 103 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n~-g~~~-~s~~~~l~V~~ 103 (176)
++.+|+|.|.|.+.|. +... .. +.|.|..
T Consensus 83 v~~~D~G~Y~C~~~n~~~~~~~~~--~~l~V~~ 113 (247)
T 1svz_A 83 VEAEDLGIYYCFQGSHFPPTFGGG--TKLEIKG 113 (247)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCC--EEEEEC-
T ss_pred CCHHHCEEEEEEEccCCccEECCC--EEEEEEC
Confidence 9999999999999987 3211 12 4566554
No 242
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.51 E-value=2.4e-13 Score=94.89 Aligned_cols=129 Identities=22% Similarity=0.238 Sum_probs=82.9
Q ss_pred EeCCceeEEecCCcEEEEEEEeec-------CCCeeEEEeCCEEe------c-----------cCcceEEEEe--cceEE
Q psy8425 14 VSGLRNVSVKLRQSLRLVCRCKGN-------PLPAVSWFKDNVEI------T-----------TNKRLKIQFK--KKRST 67 (176)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~~~g~-------p~p~i~W~~~g~~l------~-----------~~~~~~~~~~--~~~~~ 67 (176)
+..+..+.+.+|+++.|.|.+.+. +.+.+.|+|++... . ...++.+... ..+.+
T Consensus 4 ~~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~s 83 (214)
T 2zg1_A 4 LQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCS 83 (214)
T ss_dssp EECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCC
T ss_pred eeCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEE
Confidence 455677889999999999998754 46789999986421 0 1133333211 23457
Q ss_pred EEEcccCCCCCEEEEEEEEcCC-CceE--EEEEEEEEecCCC---------------------CCC----CCCCCCeEEe
Q psy8425 68 LIITRIRSEDAGRYECRGTGVH-KDVV--SAFAEVSINLRPD---------------------NMG----GPCPLDSYCL 119 (176)
Q Consensus 68 L~i~~v~~~d~G~Y~C~a~n~g-~~~~--s~~~~l~V~~~p~---------------------~~g----~p~p~~~~~~ 119 (176)
|.|.+++.+|+|.|.|.+.+.. .... +..+.|.|..++. +.| .|.|...+..
T Consensus 84 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~ 163 (214)
T 2zg1_A 84 LSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFSWTG 163 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--CCCCTTCCEEEEEECTTCCSCSSCCEEEEES
T ss_pred EEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCccccCCCeEEEEEEeccCCCCCCCceEEEeC
Confidence 9999999999999999999873 2211 1126777776321 222 2444223332
Q ss_pred -----------cCCEEEE----eccCCeeEEEecCCccc
Q psy8425 120 -----------NGGSCTY----YDTVGELVCQCAEGYKG 143 (176)
Q Consensus 120 -----------~~~~~~i----~~d~g~y~C~~~~n~~g 143 (176)
..+.+.| .+|.|.|+|. |.|..|
T Consensus 164 ~~~~~~~~~~~~~~~L~i~~~~~~~~g~Y~C~-a~n~~~ 201 (214)
T 2zg1_A 164 NALSPLDPETTRSSELTLTPRPEDHGTNLTCQ-MKRQGA 201 (214)
T ss_dssp STTSSSCSSCCCSSEEEECCCTTCCSCEEEEE-EECC--
T ss_pred CCCccCCCCceeEEEEEEecccHHcCcEEEEE-EEeCCC
Confidence 2356666 5778899999 888654
No 243
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.51 E-value=4.6e-14 Score=98.21 Aligned_cols=103 Identities=27% Similarity=0.455 Sum_probs=72.8
Q ss_pred ccccC-CCeEEeCCceeEEecCCcEEEEEEE-eecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEE
Q psy8425 5 LRATI-HPIEVSGLRNVSVKLRQSLRLVCRC-KGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 5 l~v~~-~p~~~~~~~~~~v~~G~~~~l~C~~-~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 82 (176)
|.|.. ++.+...+....+.+|+.+.|.|.+ .+.|.|.+.|++++..+........ . ....|.|.++..+|+|.|+
T Consensus 105 l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~-~--~~~~L~i~~~~~~d~G~Y~ 181 (212)
T 2v9r_A 105 LEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERIT-I--RGGKLMITYTRKSDAGKYV 181 (212)
T ss_dssp EEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEE-E--ETTEEEESSCCGGGCEEEE
T ss_pred EEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEE-c--cCCeEEEeeCCHhhCeeEE
Confidence 34443 3445555667789999999999998 8999999999999999876433222 1 2358999999999999999
Q ss_pred EEEEcC-CCceEEEEEEEEEecCCCCCCCC
Q psy8425 83 CRGTGV-HKDVVSAFAEVSINLRPDNMGGP 111 (176)
Q Consensus 83 C~a~n~-g~~~~s~~~~l~V~~~p~~~g~p 111 (176)
|.|.|. |... +..+.|.|..+|.....|
T Consensus 182 C~a~N~~g~~~-s~~~~l~V~~~P~~~~~P 210 (212)
T 2v9r_A 182 CVGTNMVGERE-SEVAELTVLERPSFVKAA 210 (212)
T ss_dssp EEEEETTEEEE-CCCEEEEEEC--------
T ss_pred EEEecccCcee-cceEEEEEEeCchHhhhc
Confidence 999999 5433 222789999888755444
No 244
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.50 E-value=1.5e-13 Score=100.02 Aligned_cols=95 Identities=14% Similarity=0.122 Sum_probs=74.1
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEee-cCCCeeEEEeCCEEeccCcceEEEE--ecceEEEEEcccCCCCCEEEEEEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKG-NPLPAVSWFKDNVEITTNKRLKIQF--KKKRSTLIITRIRSEDAGRYECRG 85 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g-~p~p~i~W~~~g~~l~~~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a 85 (176)
.+|.+...+....+.+|+.+.|.|.+.+ .|.+.+.|++++..+.......... ......|.|.++..+|+|.|+|.|
T Consensus 185 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 264 (289)
T 3ejj_X 185 EPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVA 264 (289)
T ss_dssp CCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEE
T ss_pred CCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEE
Confidence 5788887777778889999999999998 7899999999999886532211100 023578999999999999999999
Q ss_pred EcC-CCceEEEEEEEEEecCC
Q psy8425 86 TGV-HKDVVSAFAEVSINLRP 105 (176)
Q Consensus 86 ~n~-g~~~~s~~~~l~V~~~p 105 (176)
.|. |....+ +.|.+..++
T Consensus 265 ~N~~G~~~~s--~~L~~~~~~ 283 (289)
T 3ejj_X 265 SNDVGTRTAT--MNFQVVESH 283 (289)
T ss_dssp ECSSCEEEEE--EEEECC---
T ss_pred EcCCCCcccc--EEEEEEecc
Confidence 999 887777 878776543
No 245
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.50 E-value=3.4e-13 Score=98.28 Aligned_cols=72 Identities=17% Similarity=0.267 Sum_probs=53.5
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEec---ceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKK---KRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
|.|.....++.+.+|+++.|.|.+.+. +.|++++..+.. ...... ...+|.|.+++.+|+|.|+|.|.|
T Consensus 1 P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~----~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 72 (289)
T 3mjg_X 1 LVVTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPPQ----EMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHND 72 (289)
T ss_dssp CCBCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCSE----EEEECTTSCEEEEEEECSCCGGGCEEEEEECCC
T ss_pred CeecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCCccc----ceeccCCCceeEEEEEccCChhhCEEEEEEEcc
Confidence 344445566789999999999998874 999999987732 111111 147899999999999999999999
Q ss_pred C-CC
Q psy8425 88 V-HK 90 (176)
Q Consensus 88 ~-g~ 90 (176)
. |.
T Consensus 73 ~~g~ 76 (289)
T 3mjg_X 73 SRGL 76 (289)
T ss_dssp ----
T ss_pred cCCC
Confidence 8 54
No 246
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.50 E-value=5.8e-13 Score=95.64 Aligned_cols=90 Identities=19% Similarity=0.207 Sum_probs=61.0
Q ss_pred EeCCceeEEecCCcEEEEEEEeecC--CCeeEEEeC--CEEec-----------------cCcceEEEEe--cceEEEEE
Q psy8425 14 VSGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKD--NVEIT-----------------TNKRLKIQFK--KKRSTLII 70 (176)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i 70 (176)
+..+..+.+.+|++++|.|.+.+.+ .+.+.|+|. +..+. ...++.+... ....+|.|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 84 (253)
T 3uzq_A 5 LEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHL 84 (253)
T ss_dssp EEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEe
Confidence 3456678899999999999998844 678999982 21110 1244554433 23567999
Q ss_pred cccCCCCCEEEEEEEEcCCCceEEEEEEEEEec
Q psy8425 71 TRIRSEDAGRYECRGTGVHKDVVSAFAEVSINL 103 (176)
Q Consensus 71 ~~v~~~d~G~Y~C~a~n~g~~~~s~~~~l~V~~ 103 (176)
.+++.+|+|.|.|.+.|.........+.|.|..
T Consensus 85 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~ 117 (253)
T 3uzq_A 85 SSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSA 117 (253)
T ss_dssp CSCCGGGCEEEEEEECSSSCCEECCCEEEEECS
T ss_pred CCCCcccCEEEEEEEeeCCccEECCCcEEEEec
Confidence 999999999999999986222211115666663
No 247
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.50 E-value=1.4e-13 Score=101.15 Aligned_cols=88 Identities=25% Similarity=0.316 Sum_probs=70.7
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCC-eeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLP-AVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
+|.|..... ..+.+|+.+.|.|.+.+.|.| .+.|+++|..+..+.++.+. .....|.|.++..+|+|.|+|.|.|.
T Consensus 222 ~p~~~~~~~-~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~I~~v~~~d~G~Y~C~a~N~ 298 (312)
T 2y23_A 222 GPHFVEYLS-WEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKDD 298 (312)
T ss_dssp SSEEEEEEE-EEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC------CEEEEEECSCSGGGCEEEEEEEEST
T ss_pred CCceeecce-EEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEE--CCEEEEEECcCCHHHCEEEEEEEEcC
Confidence 466664433 678999999999999999998 99999999999866665544 44579999999999999999999999
Q ss_pred -CCceEEEEEEEEEe
Q psy8425 89 -HKDVVSAFAEVSIN 102 (176)
Q Consensus 89 -g~~~~s~~~~l~V~ 102 (176)
|....+ +.|.++
T Consensus 299 ~G~~~~~--~~l~i~ 311 (312)
T 2y23_A 299 RGKDKSR--LKLVDE 311 (312)
T ss_dssp TCCEEEE--EEECSC
T ss_pred CCceeee--eEEEec
Confidence 877776 766653
No 248
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.49 E-value=2.1e-13 Score=95.50 Aligned_cols=72 Identities=22% Similarity=0.272 Sum_probs=54.4
Q ss_pred CceeEEecCCcEEEEEEE-eecC-CCeeEEEeCC--EEec------------cCcceEEEEecceEEEEEcccCCCCCEE
Q psy8425 17 LRNVSVKLRQSLRLVCRC-KGNP-LPAVSWFKDN--VEIT------------TNKRLKIQFKKKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~-~g~p-~p~i~W~~~g--~~l~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 80 (176)
+..+.+.+|++++|.|.+ .+.+ .+.+.|+|++ ..+. ...++.+.......+|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 566789999999999995 4443 5789999943 2211 1245555444566799999999999999
Q ss_pred EEEEEEcC
Q psy8425 81 YECRGTGV 88 (176)
Q Consensus 81 Y~C~a~n~ 88 (176)
|.|.+.|.
T Consensus 87 Y~C~~~~~ 94 (216)
T 2xzc_L 87 YYCGTWDS 94 (216)
T ss_dssp EEEEEECT
T ss_pred EEEEEEeC
Confidence 99999998
No 249
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.49 E-value=1.6e-13 Score=93.32 Aligned_cols=93 Identities=22% Similarity=0.216 Sum_probs=69.3
Q ss_pred ccccCCCeEEeCCceeEEecCCcEEEEEEEe-ecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEE
Q psy8425 5 LRATIHPIEVSGLRNVSVKLRQSLRLVCRCK-GNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 5 l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~-g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 83 (176)
|.|..++.+...+ ...+.+|+.+.|.|.+. +.|.+.+.|+++|..+... .....|.|.++..+|+|.|+|
T Consensus 81 l~V~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C 151 (176)
T 1f2q_A 81 LEVFSDWLLLQAS-AEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW--------YENHNISITNATVEDSGTYYC 151 (176)
T ss_dssp EEEECSSEEEEES-CSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC--------CCSSEEEESSCCGGGCEEEEE
T ss_pred EEEeCcceeecCC-cceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee--------cCCCeEEECCCCcccCEEEEE
Confidence 4455455544433 35688999999999994 5666799999999988542 235689999999999999999
Q ss_pred EEEcCCCceEEEEEEEEEecCCC
Q psy8425 84 RGTGVHKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 84 ~a~n~g~~~~s~~~~l~V~~~p~ 106 (176)
.|.|......+..+.|.|..+|.
T Consensus 152 ~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 152 TGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp EEEETTEEEECCCEEEEEECSCC
T ss_pred EEEeCCcceEecCEEEEEecCCC
Confidence 99997222233338899988774
No 250
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.49 E-value=1.7e-14 Score=100.39 Aligned_cols=96 Identities=16% Similarity=0.216 Sum_probs=71.9
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEE-eecCCCeeEEEeC--CEEeccCcceEEEEecceEEEEEcccCCCCCEE
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRC-KGNPLPAVSWFKD--NVEITTNKRLKIQFKKKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~-~g~p~p~i~W~~~--g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 80 (176)
.|.|..+|.+...+....+.+|+.+.|.|.+ .+.|.|.+.|+++ +..+...... ......|.|.++..+|+|.
T Consensus 115 ~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~~----~~~~~~L~i~~~~~~d~G~ 190 (214)
T 3jz7_A 115 LLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLA----EMTSPVISVKNASSEYSGT 190 (214)
T ss_dssp EEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGGGG----GTTSSEEEECSCCGGGCEE
T ss_pred EEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccCcccee----ccCCCEEEEecCCHHHCEE
Confidence 4566677765544444557889999999999 8999999999994 3444322111 1244689999999999999
Q ss_pred EEEEEEcC-CCceEEEEEEEEEecCC
Q psy8425 81 YECRGTGV-HKDVVSAFAEVSINLRP 105 (176)
Q Consensus 81 Y~C~a~n~-g~~~~s~~~~l~V~~~p 105 (176)
|+|.|.|. |....+ +.|.|..||
T Consensus 191 Y~C~a~N~~g~~~~~--~~l~V~~P~ 214 (214)
T 3jz7_A 191 YSCTVQNRVGSDQCM--LRLDVVPPS 214 (214)
T ss_dssp EEEEEECSSCEEEEE--EEECCBCCC
T ss_pred EEEEEEcCCCcEEEE--EEEEEeCCC
Confidence 99999999 777666 888887544
No 251
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.49 E-value=1.4e-13 Score=105.88 Aligned_cols=88 Identities=15% Similarity=0.278 Sum_probs=65.1
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCCC----eeEEEeCC--EEec------------cCcceEEEEecceEEEEEcccC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPLP----AVSWFKDN--VEIT------------TNKRLKIQFKKKRSTLIITRIR 74 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~p----~i~W~~~g--~~l~------------~~~~~~~~~~~~~~~L~i~~v~ 74 (176)
+...+..+.+.+|+++.|.|.+.+.|.+ .+.|+|++ ..+. ...++.+.......+|.|.+++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (438)
T 1qgc_4 4 LTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVE 83 (438)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCC
T ss_pred eEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCc
Confidence 5566778899999999999999888764 89999963 2211 1245555544566799999999
Q ss_pred CCCCEEEEEEEEcC-CCc-eEEEEEEEEEe
Q psy8425 75 SEDAGRYECRGTGV-HKD-VVSAFAEVSIN 102 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~-g~~-~~s~~~~l~V~ 102 (176)
.+|+|.|+|.|.|. +.. ... +.|.|.
T Consensus 84 ~~D~G~Y~C~a~n~~~~~~~~~--~~l~V~ 111 (438)
T 1qgc_4 84 ADDVATYYCQQSNEVPLTFGAG--TKLDLK 111 (438)
T ss_dssp GGGCEEEEEEECSSTTCCBCCC--EEEEEC
T ss_pred CcCCeeEEEEEecCCCccccCc--eeEEec
Confidence 99999999999998 432 223 555654
No 252
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.49 E-value=2.8e-13 Score=95.22 Aligned_cols=83 Identities=20% Similarity=0.355 Sum_probs=69.8
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-C
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-H 89 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g 89 (176)
|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++..+... ....|.|.++..+|+|.|+|.|.|. |
T Consensus 119 p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~---------~~~~L~i~~v~~~d~G~Y~C~a~n~~g 189 (218)
T 3k0w_A 119 LQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE---------TKKLYMVPYVDLEHQGTYWCHVYNDRD 189 (218)
T ss_dssp CEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTC---------CSSEEEESSCCGGGCEEEEEEEECSSC
T ss_pred ceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCC---------CCCEEEEeecChhcCEEEEEEEEcCCC
Confidence 67777788889999999999999999999999999999988763 3358999999999999999999998 5
Q ss_pred CceEEEEEEEEEec
Q psy8425 90 KDVVSAFAEVSINL 103 (176)
Q Consensus 90 ~~~~s~~~~l~V~~ 103 (176)
.. .+..+.|.|..
T Consensus 190 ~~-~s~~~~l~V~~ 202 (218)
T 3k0w_A 190 SQ-DSKKVEIIIDE 202 (218)
T ss_dssp EE-ECCCEEEEECC
T ss_pred Cc-eeeeEEEEEeC
Confidence 42 23237777765
No 253
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.48 E-value=4.5e-13 Score=99.09 Aligned_cols=92 Identities=15% Similarity=0.185 Sum_probs=62.7
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcce-EEEEecceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRL-KIQFKKKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
+|.+...+... +.+|++++|.|.+. .+.+.+.|+++|..+...... ..........|.|.+++.+|+|.|+|.|.|.
T Consensus 119 ~p~~~~~~~~~-v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 196 (316)
T 3vh8_G 119 KPSLLAHPGPL-VKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVT 196 (316)
T ss_dssp CCEEEEESCSE-EETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECT
T ss_pred CCeEEecCCCc-cCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecC
Confidence 45565544444 88999999999985 456789999999876542111 1111124578999999999999999999998
Q ss_pred -CCc---eEEEEEEEEEec
Q psy8425 89 -HKD---VVSAFAEVSINL 103 (176)
Q Consensus 89 -g~~---~~s~~~~l~V~~ 103 (176)
+.. ..+..+.|.|..
T Consensus 197 ~g~~~~s~~s~~~~l~V~~ 215 (316)
T 3vh8_G 197 HTPYQLSAPSDPLDIVVTG 215 (316)
T ss_dssp TCTTBCCCCCCCEEEEEEC
T ss_pred CCCccccCCCCCEEEEecC
Confidence 532 112225666653
No 254
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.48 E-value=2.3e-13 Score=111.45 Aligned_cols=128 Identities=20% Similarity=0.244 Sum_probs=62.5
Q ss_pred eCCceeEEecCCcEEEEEEEeec--CCCeeEEEeCCEEeccCcceEE--------EEecceEEEEEcccCCCCCEEEEEE
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGN--PLPAVSWFKDNVEITTNKRLKI--------QFKKKRSTLIITRIRSEDAGRYECR 84 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~--p~p~i~W~~~g~~l~~~~~~~~--------~~~~~~~~L~i~~v~~~d~G~Y~C~ 84 (176)
.++..+.+.+|+.+.|.|.+.+. |.+.+.|++++..+........ ........|.|.+++.+|+|.|+|.
T Consensus 229 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 308 (772)
T 3v2a_R 229 SPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCA 308 (772)
T ss_dssp ECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEE
T ss_pred CCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEE
Confidence 33445789999999999999884 4568999999887654222111 0112456899999999999999999
Q ss_pred EEcC-CCceEEEEEEEEEecCCC------------------------CCCCCCCCCeEEecC------------CEEEE-
Q psy8425 85 GTGV-HKDVVSAFAEVSINLRPD------------------------NMGGPCPLDSYCLNG------------GSCTY- 126 (176)
Q Consensus 85 a~n~-g~~~~s~~~~l~V~~~p~------------------------~~g~p~p~~~~~~~~------------~~~~i- 126 (176)
+.|. +....+ +.|.|..+|. ..|.|.|...+..+| +.+.|
T Consensus 309 ~~~~~~~~~~~--~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~L~i~ 386 (772)
T 3v2a_R 309 ASSGLMTKKNS--TFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIKAGHVLTIM 386 (772)
T ss_dssp EECSSCEEEEE--EEEEEECCCC---------------------------------------------------------
T ss_pred EEcCCcceeEE--EEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCceEccceeEEEe
Confidence 9998 655555 8888887764 234444422233222 44554
Q ss_pred ---eccCCeeEEEecCCcccCc
Q psy8425 127 ---YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 127 ---~~d~g~y~C~~~~n~~g~~ 145 (176)
.+|.|.|.|. +.|..|..
T Consensus 387 ~v~~~d~G~Y~C~-a~n~~g~~ 407 (772)
T 3v2a_R 387 EVSERDTGNYTVI-LTNPISKE 407 (772)
T ss_dssp ----------------------
T ss_pred cCChhcCceEEEE-EEECCcCe
Confidence 6899999999 98988754
No 255
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.48 E-value=3.6e-13 Score=94.36 Aligned_cols=95 Identities=21% Similarity=0.220 Sum_probs=67.0
Q ss_pred CCeEE-eCCceeEEecCCcEEEEEEEeecCC--CeeEEEeCCEEeccCcc-e-EEEE------ecceEEEEEcccCCCCC
Q psy8425 10 HPIEV-SGLRNVSVKLRQSLRLVCRCKGNPL--PAVSWFKDNVEITTNKR-L-KIQF------KKKRSTLIITRIRSEDA 78 (176)
Q Consensus 10 ~p~~~-~~~~~~~v~~G~~~~l~C~~~g~p~--p~i~W~~~g~~l~~~~~-~-~~~~------~~~~~~L~i~~v~~~d~ 78 (176)
+|.+. .++..+.+.+|++++|.|.+.|.|. +.+.|++++..+..... . .... .....+|.|.+++.+|+
T Consensus 104 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 183 (213)
T 2x1w_L 104 IYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQ 183 (213)
T ss_dssp EEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGC
T ss_pred ccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccC
Confidence 34443 3445558999999999999998654 47999998876433111 0 0000 12245799999999999
Q ss_pred EEEEEEEEcC-CCceEEEEEEEEEecCCC
Q psy8425 79 GRYECRGTGV-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 79 G~Y~C~a~n~-g~~~~s~~~~l~V~~~p~ 106 (176)
|.|+|.|.|. |....+ +.|.|..+|.
T Consensus 184 G~Y~C~a~N~~g~~~~~--~~l~V~~~p~ 210 (213)
T 2x1w_L 184 GLYTCAASSGLMTKKNS--TFVRVHEDPI 210 (213)
T ss_dssp EEEEEEEECSSCEEEEE--EEEEEEC---
T ss_pred EEEEEEEecCCCcEEEE--EEEEEecccc
Confidence 9999999999 777666 9999988764
No 256
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.48 E-value=4.9e-13 Score=96.88 Aligned_cols=96 Identities=13% Similarity=0.193 Sum_probs=67.9
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecC------CCeeEEEeC--CEEec------------cCcceEEEEecceEEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNP------LPAVSWFKD--NVEIT------------TNKRLKIQFKKKRSTL 68 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p------~p~i~W~~~--g~~l~------------~~~~~~~~~~~~~~~L 68 (176)
..+.+...+..+.+.+|++++|.|.+.+.| .+.+.|+|+ +..+. ...++.+.......+|
T Consensus 4 ~~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L 83 (264)
T 2gjj_A 4 ADIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTL 83 (264)
T ss_dssp CCCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEE
T ss_pred cccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEE
Confidence 345667778888999999999999998887 678999984 22111 1345655444556799
Q ss_pred EEcccCCCCCEEEEEEEEcCCCceEEEEEEEEEecC
Q psy8425 69 IITRIRSEDAGRYECRGTGVHKDVVSAFAEVSINLR 104 (176)
Q Consensus 69 ~i~~v~~~d~G~Y~C~a~n~g~~~~s~~~~l~V~~~ 104 (176)
.|.+++.+|+|.|.|.+.+.........+.|.|..+
T Consensus 84 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~ 119 (264)
T 2gjj_A 84 TIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRG 119 (264)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC
T ss_pred EECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcC
Confidence 999999999999999999872211111145666543
No 257
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.48 E-value=2.3e-13 Score=95.08 Aligned_cols=57 Identities=21% Similarity=0.431 Sum_probs=47.3
Q ss_pred EecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 22 VKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 22 v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
+.+|++++|.|.+ |.+.+.|+|+|..+... .....+|.|.+++.+|+|.|+|.+.+.
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~-------~~~~~~L~i~~v~~~DsG~Y~C~~~~~ 71 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL-------TEDKKKWNLGSNAKDPRGMYQCKGSQN 71 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE-------ESSCCCEEEEEGGGCCEEEEEEESSSS
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC-------CCCCCeEEeCCCCcCCCEEEEEEecCC
Confidence 3579999999998 78899999999887642 134568999999999999999997654
No 258
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.48 E-value=1.1e-13 Score=96.62 Aligned_cols=94 Identities=22% Similarity=0.297 Sum_probs=69.1
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeec-CCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEE
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGN-PLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 82 (176)
.|.|..+|.+...+. ..+.+|+++.|.|.+.+. |.+.+.|+|+|..+... .....|.|.++..+|+|.|+
T Consensus 83 ~l~V~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~--------~~~~~L~i~~v~~~D~G~Y~ 153 (204)
T 3sgj_C 83 QLEVHIGWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYF--------HHNSDFYIPKATLKDSGSYF 153 (204)
T ss_dssp EEEEECSSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEE--------EECCCEEESSCCGGGCEEEE
T ss_pred EEEEecCceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeecc--------cCCceEEECcCCcccCEEEE
Confidence 455666777665554 678899999999999766 55789999999886431 23468999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEEecCCC
Q psy8425 83 CRGTGVHKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 83 C~a~n~g~~~~s~~~~l~V~~~p~ 106 (176)
|.|.|......+..+.|.|.++|.
T Consensus 154 C~a~n~~~~~~s~~~~l~V~~~~~ 177 (204)
T 3sgj_C 154 CRGLVGSKNVSSETVQITITQGLA 177 (204)
T ss_dssp EEEEETTEEEECCCEEEEEEC---
T ss_pred EEEEeCCCceecCcEEEEEeCcCC
Confidence 999995212233338888887654
No 259
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.48 E-value=1.2e-13 Score=96.50 Aligned_cols=72 Identities=24% Similarity=0.375 Sum_probs=54.3
Q ss_pred CceeEEecCCcEEEEEEEeecC--CCeeEEEeC--CEEec----------------cCcceEEEEe--cceEEEEEcccC
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKD--NVEIT----------------TNKRLKIQFK--KKRSTLIITRIR 74 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~--g~~l~----------------~~~~~~~~~~--~~~~~L~i~~v~ 74 (176)
+..+.+.+|++++|.|.+.+.| .+.+.|+|+ +..+. ...++.+... ....+|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 5567899999999999999875 478999985 22211 1245555432 234689999999
Q ss_pred CCCCEEEEEEEEcC
Q psy8425 75 SEDAGRYECRGTGV 88 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~ 88 (176)
.+|+|.|.|.+.|.
T Consensus 87 ~~D~G~Y~C~~~~~ 100 (210)
T 3d9a_H 87 TEDTATYYCANWDG 100 (210)
T ss_dssp GGGCEEEEEEETTS
T ss_pred cccCEEEEEEEecC
Confidence 99999999999985
No 260
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.48 E-value=9.8e-13 Score=95.14 Aligned_cols=94 Identities=15% Similarity=0.135 Sum_probs=64.4
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcce-EEEEecceEEEEEcccCCCCCEEEEEEEE
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRL-KIQFKKKRSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
..+|.+...+. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+...... ..........|.|.+++.+|+|.|+|.+.
T Consensus 5 ~~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 82 (257)
T 1b6u_A 5 HRKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGS 82 (257)
T ss_dssp CCCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEE
T ss_pred CCCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEe
Confidence 45777776665 67899999999999874 56789999998654321100 00001245789999999999999999998
Q ss_pred cC-C---CceEEEEEEEEEec
Q psy8425 87 GV-H---KDVVSAFAEVSINL 103 (176)
Q Consensus 87 n~-g---~~~~s~~~~l~V~~ 103 (176)
+. . ....+..+.|.|..
T Consensus 83 ~~~~~~~~s~~S~~~~L~V~~ 103 (257)
T 1b6u_A 83 VTHSPYQLSAPSDPLDIVITG 103 (257)
T ss_dssp CSSCTTSCCCCCCCEEEEEEC
T ss_pred ccCCCccccccCCCEEEeccc
Confidence 64 2 12223336777764
No 261
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.47 E-value=1.2e-12 Score=82.22 Aligned_cols=76 Identities=14% Similarity=0.274 Sum_probs=59.5
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--E---Eec---------cCcceEEEEecceEEEEEcccCCCCC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--V---EIT---------TNKRLKIQFKKKRSTLIITRIRSEDA 78 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~---~l~---------~~~~~~~~~~~~~~~L~i~~v~~~d~ 78 (176)
+...+..+.+.+|++++|.|.+.+.|.+.+.|+|+. . .+. ...++.+.......+|.|.+++.+|+
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 83 (108)
T 1jhl_L 4 LTQSPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDF 83 (108)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTCC
T ss_pred eeccCCeeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHHHC
Confidence 455677788999999999999999988999999853 1 111 12455554334567899999999999
Q ss_pred EEEEEEEEcC
Q psy8425 79 GRYECRGTGV 88 (176)
Q Consensus 79 G~Y~C~a~n~ 88 (176)
|.|.|.+.|.
T Consensus 84 G~Y~C~~~n~ 93 (108)
T 1jhl_L 84 AMYICQQHNE 93 (108)
T ss_dssp SEEEEEECSS
T ss_pred EEEEEEEccC
Confidence 9999999987
No 262
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.47 E-value=9.8e-13 Score=96.07 Aligned_cols=77 Identities=16% Similarity=0.285 Sum_probs=57.9
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecC--CCeeEEEeCC--EEec-----------------cCcceEEEEe--cceEEEE
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDN--VEIT-----------------TNKRLKIQFK--KKRSTLI 69 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g--~~l~-----------------~~~~~~~~~~--~~~~~L~ 69 (176)
.+..+..+.+.+|++++|.|.+.+.| .+.+.|+|++ ..+. ...++.+... ....+|.
T Consensus 29 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 108 (282)
T 1qok_A 29 KLQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQ 108 (282)
T ss_dssp EEEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEE
T ss_pred EEECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEE
Confidence 34556778899999999999998875 5789999953 1110 1245554432 2457899
Q ss_pred EcccCCCCCEEEEEEEEcC-C
Q psy8425 70 ITRIRSEDAGRYECRGTGV-H 89 (176)
Q Consensus 70 i~~v~~~d~G~Y~C~a~n~-g 89 (176)
|.+++.+|+|.|.|.+.|. +
T Consensus 109 I~~v~~~DsG~Y~C~~~n~~g 129 (282)
T 1qok_A 109 LSSLTSEDTAVYYCNEGTPTG 129 (282)
T ss_dssp ECSCCGGGCEEEEEEEECSSS
T ss_pred ECcCChhhCEEEEEEeccCCC
Confidence 9999999999999999998 5
No 263
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.47 E-value=1.4e-12 Score=93.80 Aligned_cols=80 Identities=18% Similarity=0.336 Sum_probs=59.4
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEee--cCCCeeEEEeCC--EEec-----------------cCcceEEEEe--cce
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKG--NPLPAVSWFKDN--VEIT-----------------TNKRLKIQFK--KKR 65 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g--~p~p~i~W~~~g--~~l~-----------------~~~~~~~~~~--~~~ 65 (176)
.+|.+...+..+.+.+|++++|.|.+.+ .+.+.+.|+|.. ..+. ...++.+... ...
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 4566778888999999999999999988 367789999732 1110 1135555432 335
Q ss_pred EEEEEcccCCCCCEEEEEEEEcC
Q psy8425 66 STLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 66 ~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
.+|.|.+++.+|+|.|.|.+.|.
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~ 107 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGE 107 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCC
T ss_pred EEEEECCCCcccCEEEEEeEEec
Confidence 67999999999999999999985
No 264
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.46 E-value=5.7e-13 Score=98.20 Aligned_cols=93 Identities=17% Similarity=0.261 Sum_probs=73.6
Q ss_pred CCCeEEeCCce-eEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEE----EEe--------cceEEEEEcccCC
Q psy8425 9 IHPIEVSGLRN-VSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKI----QFK--------KKRSTLIITRIRS 75 (176)
Q Consensus 9 ~~p~~~~~~~~-~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~----~~~--------~~~~~L~i~~v~~ 75 (176)
.+|.+...+.. +.+.+|+.+.|.|.+.|.|.|.+.|+++|..+........ ... .....|.|.++..
T Consensus 207 ~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~ 286 (315)
T 1itb_B 207 TRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIES 286 (315)
T ss_dssp CCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCG
T ss_pred CCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCH
Confidence 67887766654 5789999999999999999999999999999876543211 111 1235899999999
Q ss_pred CC-CEEEEEEEEcC-CCceEEEEEEEEEec
Q psy8425 76 ED-AGRYECRGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 76 ~d-~G~Y~C~a~n~-g~~~~s~~~~l~V~~ 103 (176)
+| +|.|+|.|.|. |....+ +.|.|..
T Consensus 287 ~d~~G~Y~C~a~N~~G~~~~~--~~l~v~~ 314 (315)
T 1itb_B 287 RFYKHPFTCFAKNTHGIDAAY--IQLIYPV 314 (315)
T ss_dssp GGGTSCEEEEEECTTCCEEEE--EEEECCC
T ss_pred HHcCCceEEEEecCCCceeEE--EEEEecC
Confidence 99 99999999999 887777 7777643
No 265
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.46 E-value=8.8e-14 Score=98.49 Aligned_cols=77 Identities=18% Similarity=0.272 Sum_probs=57.4
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecCC-C-eeEEEeCC--EEe------------ccCcceEEEEecceEEEEEcccC
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNPL-P-AVSWFKDN--VEI------------TTNKRLKIQFKKKRSTLIITRIR 74 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p~-p-~i~W~~~g--~~l------------~~~~~~~~~~~~~~~~L~i~~v~ 74 (176)
+.+.. +..+.+.+|++++|.|.+.+.+. + .+.|+|++ ..+ ....++.+.......+|.|.+++
T Consensus 21 ~~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 99 (234)
T 2j6e_L 21 SVLTQ-PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLR 99 (234)
T ss_dssp CCCBC-CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCC
T ss_pred cEEeC-CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCC
Confidence 33344 66778999999999999987543 4 69999853 221 01245555444566799999999
Q ss_pred CCCCEEEEEEEEcC
Q psy8425 75 SEDAGRYECRGTGV 88 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~ 88 (176)
.+|+|.|.|.+.|.
T Consensus 100 ~~D~G~Y~C~~~~~ 113 (234)
T 2j6e_L 100 SEDEADYYCATWDD 113 (234)
T ss_dssp STTCSEEEEEEEET
T ss_pred HHHCEEEEEEEEcC
Confidence 99999999999998
No 266
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.46 E-value=3e-12 Score=92.02 Aligned_cols=94 Identities=20% Similarity=0.273 Sum_probs=62.2
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeec--CCCeeEEEeCC--E--Eec--------------cCcceEEEEe--cceEEE
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGN--PLPAVSWFKDN--V--EIT--------------TNKRLKIQFK--KKRSTL 68 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~--p~p~i~W~~~g--~--~l~--------------~~~~~~~~~~--~~~~~L 68 (176)
+..+..+..+.+.+|++++|.|.+.+. +.+.+.|+|.. . .+. ...++.+... ....+|
T Consensus 9 ~v~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 88 (257)
T 3gkz_A 9 EVQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYL 88 (257)
T ss_dssp CEEEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEE
T ss_pred cEEEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEE
Confidence 334455667789999999999999984 46799999832 1 111 1234544432 235589
Q ss_pred EEcccCCCCCEEEEEEEEcC-CCc--eEEEEEEEEEecC
Q psy8425 69 IITRIRSEDAGRYECRGTGV-HKD--VVSAFAEVSINLR 104 (176)
Q Consensus 69 ~i~~v~~~d~G~Y~C~a~n~-g~~--~~s~~~~l~V~~~ 104 (176)
.|.+++.+|+|.|.|.+.|. +.. .....+.|.|..+
T Consensus 89 ~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~ 127 (257)
T 3gkz_A 89 QLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGG 127 (257)
T ss_dssp EECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC--
T ss_pred EECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCc
Confidence 99999999999999999986 211 1111256666654
No 267
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.46 E-value=1.5e-13 Score=105.76 Aligned_cols=76 Identities=25% Similarity=0.331 Sum_probs=57.8
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecC--CCeeEEEeC--CEEec-----------------cCcceEEEEe--cceEEEE
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKD--NVEIT-----------------TNKRLKIQFK--KKRSTLI 69 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~ 69 (176)
.+..+....+.+|+.+.|.|.+.|.| .+.+.|+|+ +..+. ...++.+... ....+|.
T Consensus 221 ~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 300 (438)
T 1qgc_4 221 MLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQ 300 (438)
T ss_dssp EEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEE
T ss_pred EEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEE
Confidence 34445667899999999999999988 679999996 54332 1244544432 2356899
Q ss_pred EcccCCCCCEEEEEEEEcC
Q psy8425 70 ITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 70 i~~v~~~d~G~Y~C~a~n~ 88 (176)
|.+++.+|+|.|.|.|.|.
T Consensus 301 I~~v~~~D~G~Y~C~a~n~ 319 (438)
T 1qgc_4 301 MSSLRSADTAMYYCVRRED 319 (438)
T ss_dssp ECSCCGGGCCEEEEEECCS
T ss_pred ECCCChhhCEEEEEEEEcc
Confidence 9999999999999999985
No 268
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.46 E-value=2.3e-13 Score=97.79 Aligned_cols=72 Identities=22% Similarity=0.300 Sum_probs=55.7
Q ss_pred CceeEEecCCcEEEEEEEeec--CCCeeEEEeCC--EEec------------cCcceEEEEecceEEEEEcccCCCCCEE
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGN--PLPAVSWFKDN--VEIT------------TNKRLKIQFKKKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~--p~p~i~W~~~g--~~l~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 80 (176)
+..+.+.+|++++|.|.+.+. |.+.+.|+|+. ..+. ...++.+.......+|.|.+++.+|+|.
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 88 (256)
T 3ux9_B 9 PPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEAD 88 (256)
T ss_dssp CSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEE
Confidence 445789999999999999887 77899999842 1111 1245555444556789999999999999
Q ss_pred EEEEEEcC
Q psy8425 81 YECRGTGV 88 (176)
Q Consensus 81 Y~C~a~n~ 88 (176)
|.|.+.+.
T Consensus 89 Y~C~~~~~ 96 (256)
T 3ux9_B 89 YYCQVRDN 96 (256)
T ss_dssp EEEEEEET
T ss_pred EEEEEEEC
Confidence 99999986
No 269
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.46 E-value=3.9e-13 Score=91.33 Aligned_cols=90 Identities=21% Similarity=0.296 Sum_probs=67.0
Q ss_pred ccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCC-eeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEE
Q psy8425 5 LRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLP-AVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 5 l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 83 (176)
|.|..++.+... ....+.+|+.+.|.|.+.+.+.+ .+.|+|+|..+... .....|.|.+++.+|+|.|+|
T Consensus 84 l~V~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C 154 (175)
T 1fnl_A 84 LEVHIGWLLLQA-PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF--------HHNSDFHIPKATLKDSGSYFC 154 (175)
T ss_dssp EEEECSSEEEEC-SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEE--------EECCCEEESSCCGGGCEEEEE
T ss_pred EEEeCCCceeeC-CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCC--------CCCCEEEEcccChhhCeEEEE
Confidence 455555555544 34668899999999999887665 99999999887431 234689999999999999999
Q ss_pred EEEcCCCceEEEEEEEEEec
Q psy8425 84 RGTGVHKDVVSAFAEVSINL 103 (176)
Q Consensus 84 ~a~n~g~~~~s~~~~l~V~~ 103 (176)
.|.|......+..+.|.|..
T Consensus 155 ~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 155 RGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp EEEETTEEEECCCEEEEEEC
T ss_pred EEEcCCCCccCccEEEEEeC
Confidence 99997222333337777764
No 270
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.45 E-value=6e-15 Score=120.77 Aligned_cols=96 Identities=28% Similarity=0.544 Sum_probs=0.0
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
..+|.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|+|+|.++....++.+. ...++|.|.++..+|+|.|+|.|.|
T Consensus 664 ~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~N 741 (772)
T 3v2a_R 664 RVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLK--DGNRNLTIRRVRKEDEGLYTCQACS 741 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCCCeEEc--CCCcEEEECcCCHHHCEEEEEEEEe
Confidence 56888888888888999999999999999999999999999998775544332 3467899999999999999999999
Q ss_pred C-CCceEEEEEEEEEecCCCC
Q psy8425 88 V-HKDVVSAFAEVSINLRPDN 107 (176)
Q Consensus 88 ~-g~~~~s~~~~l~V~~~p~~ 107 (176)
. |....+ +.|.|..+|..
T Consensus 742 ~~G~~~~~--~~l~V~~~p~~ 760 (772)
T 3v2a_R 742 VLGCAKVE--AFFIIEGAQEK 760 (772)
T ss_dssp ---------------------
T ss_pred CCcceeEE--EEEEEECCCCc
Confidence 9 888877 99999987763
No 271
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.45 E-value=3.4e-14 Score=99.91 Aligned_cols=126 Identities=19% Similarity=0.252 Sum_probs=82.1
Q ss_pred CceeEEecCCcEEEEEEEee-cCCCe----eEEEeCCEEecc-------------CcceEEEE-----ecceEEEEEccc
Q psy8425 17 LRNVSVKLRQSLRLVCRCKG-NPLPA----VSWFKDNVEITT-------------NKRLKIQF-----KKKRSTLIITRI 73 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g-~p~p~----i~W~~~g~~l~~-------------~~~~~~~~-----~~~~~~L~i~~v 73 (176)
+..+.+.+|+++.|.|.+.+ .+.+. +.|+|++..... ..+..+.. ...+.+|.|.++
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 44567889999999999854 44444 999998642211 22333321 114678999999
Q ss_pred CCCCCEEEEEEEEcC--CCceEEEEEEEEEecCCC----------------------CCCCCCCCCeEEec---------
Q psy8425 74 RSEDAGRYECRGTGV--HKDVVSAFAEVSINLRPD----------------------NMGGPCPLDSYCLN--------- 120 (176)
Q Consensus 74 ~~~d~G~Y~C~a~n~--g~~~~s~~~~l~V~~~p~----------------------~~g~p~p~~~~~~~--------- 120 (176)
+.+|+|.|.|.+.+. +..... +.|.|..+|. ..|.|.|...|..+
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~--~~L~V~~~P~~~~~~~~~~~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~ 163 (221)
T 3eow_R 86 RVEDEGSYTCLFVTFPQGSRSVD--IWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQ 163 (221)
T ss_dssp SCCCCSCBEEEEEESSSCSCEEE--CCCCCCCCCEEEEEEECCCCCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEE
T ss_pred ChHHCeEEEEEEEeCCCCceEEE--EEEEEEECCCceeecCCcccCCceEEEEEEECCCccCCCeeEEEeCCCCCCccce
Confidence 999999999999986 334444 6666665554 12566553333211
Q ss_pred -----CC------EEEE----eccCCeeEEEecCCcccCc
Q psy8425 121 -----GG------SCTY----YDTVGELVCQCAEGYKGQR 145 (176)
Q Consensus 121 -----~~------~~~i----~~d~g~y~C~~~~n~~g~~ 145 (176)
++ .|.| .+|.|.|+|. +.|..+..
T Consensus 164 ~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~-a~n~~~~~ 202 (221)
T 3eow_R 164 VPGFLSGTVTVTSLWILVPSSQVDGKQVTCK-VEHESFEK 202 (221)
T ss_dssp ECCCCBTTBCCEEEEECCCCSCCCCCCEEEE-ECCSCSSS
T ss_pred eecCCCCcEEEEEEEEEeCCHHHCCCeEEEE-EECCCCCC
Confidence 11 3444 5789999999 98887653
No 272
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.45 E-value=1.7e-14 Score=102.16 Aligned_cols=79 Identities=13% Similarity=0.221 Sum_probs=47.2
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--EEe------------ccCcceEEEEecceEEEEEcccCC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--VEI------------TTNKRLKIQFKKKRSTLIITRIRS 75 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~~l------------~~~~~~~~~~~~~~~~L~i~~v~~ 75 (176)
.+.+...+..+.+.+|++++|.|.+.+.|.+.+.|+|++ ..+ ....++.+.......+|.|.+++.
T Consensus 23 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 102 (233)
T 3bqu_C 23 ETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLS 102 (233)
T ss_dssp CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----C
T ss_pred ceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCH
Confidence 455666677888999999999999999888899999843 211 001233322223445899999999
Q ss_pred CCCEEEEEEEEcC
Q psy8425 76 EDAGRYECRGTGV 88 (176)
Q Consensus 76 ~d~G~Y~C~a~n~ 88 (176)
+|+|.|.|.+.|.
T Consensus 103 ~D~G~Y~C~~~~~ 115 (233)
T 3bqu_C 103 EDVADYYCLQSDN 115 (233)
T ss_dssp CCCSEEEEEECSS
T ss_pred HHCEEEEEEEecC
Confidence 9999999999987
No 273
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.45 E-value=3.1e-13 Score=104.68 Aligned_cols=94 Identities=23% Similarity=0.407 Sum_probs=70.5
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC-EEeccCc-ceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN-VEITTNK-RLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g-~~l~~~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
+|.+...+.+..+.+|++++|.|.+ +.|.|.+.|++++ ..+.... ..++.. ..+++|.|.+++.+|+|.|+|.|.|
T Consensus 341 ~P~i~~~~~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~N 418 (440)
T 3zyj_A 341 APVIVEPPADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAV-LSDGTLNFTNVTVQDTGMYTCMVSN 418 (440)
T ss_dssp CCCEEECCCCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEE-CTTCCEEESSCCSTTCEEEEEEEEC
T ss_pred CCcccccccceeeccCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEE-ccCCeEEEccCChhhCEEEEEEEEc
Confidence 6778888888999999999999999 5789999999954 4433321 111222 3456799999999999999999999
Q ss_pred C-CCceEEEEEEEEEecCCCC
Q psy8425 88 V-HKDVVSAFAEVSINLRPDN 107 (176)
Q Consensus 88 ~-g~~~~s~~~~l~V~~~p~~ 107 (176)
. |....+ +.+.|.++|..
T Consensus 419 ~~G~~~~~--~~~~v~~~~~~ 437 (440)
T 3zyj_A 419 SVGNTTAS--ATLNVTGTHHH 437 (440)
T ss_dssp SSCEEEEE--EEEEEC-----
T ss_pred CCCcEEEE--EEEEEeccccc
Confidence 9 887777 88988876653
No 274
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.44 E-value=2e-13 Score=95.49 Aligned_cols=87 Identities=24% Similarity=0.424 Sum_probs=67.8
Q ss_pred ccccC-CCeEEeCCceeEEecCCcEEEEEEE-eecCCCeeEEEeCCEEeccC--------cceEEEEecceEEEEEcccC
Q psy8425 5 LRATI-HPIEVSGLRNVSVKLRQSLRLVCRC-KGNPLPAVSWFKDNVEITTN--------KRLKIQFKKKRSTLIITRIR 74 (176)
Q Consensus 5 l~v~~-~p~~~~~~~~~~v~~G~~~~l~C~~-~g~p~p~i~W~~~g~~l~~~--------~~~~~~~~~~~~~L~i~~v~ 74 (176)
|.+.. +|.+...+....+.+|+.+.|.|.+ .+.|.|.+.|++++..+... .++.+ ...++|.|.++.
T Consensus 102 l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~---~~~~~L~i~~~~ 178 (217)
T 2vr9_A 102 LQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRI---VDGGNLLISNVE 178 (217)
T ss_dssp EEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEE---ETTTEEEESSCC
T ss_pred EEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEe---cCCCcEEEeeCC
Confidence 34443 4555566677889999999999998 89999999999999988732 22222 234589999999
Q ss_pred CCCCEEEEEEEEcC-CCceEE
Q psy8425 75 SEDAGRYECRGTGV-HKDVVS 94 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~-g~~~~s 94 (176)
.+|+|.|+|.|.|. |....+
T Consensus 179 ~~d~G~Y~C~a~N~~G~~~~~ 199 (217)
T 2vr9_A 179 PIDEGNYKCIAQNLVGTRESS 199 (217)
T ss_dssp STTCEEEEEEEEETTEEEECC
T ss_pred HHHCeEEEEEEEcccceeccc
Confidence 99999999999999 665544
No 275
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.44 E-value=7e-13 Score=94.08 Aligned_cols=92 Identities=15% Similarity=0.286 Sum_probs=68.0
Q ss_pred eCCceeEEecCCcEEEEEEEeecCCCeeEEEe----CCEEeccCcceEEEEe--------cceEEEEEcccCCCCCEEEE
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFK----DNVEITTNKRLKIQFK--------KKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~----~g~~l~~~~~~~~~~~--------~~~~~L~i~~v~~~d~G~Y~ 82 (176)
..+....+.+|+.+.|.|.+.+.|.|.+.|++ ++..+........... .....|.|.++..+|+|.|+
T Consensus 119 ~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 198 (241)
T 3grw_A 119 GLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYL 198 (241)
T ss_dssp CTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEE
T ss_pred CCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEE
Confidence 34567788999999999999999999999999 8877765433211110 23568999999999999999
Q ss_pred EEEEcC-CCceEEEEEEEEEecCCCCC
Q psy8425 83 CRGTGV-HKDVVSAFAEVSINLRPDNM 108 (176)
Q Consensus 83 C~a~n~-g~~~~s~~~~l~V~~~p~~~ 108 (176)
|.|.|. |....+ +.|.|..+|...
T Consensus 199 C~a~N~~g~~~~~--~~l~V~~~p~~~ 223 (241)
T 3grw_A 199 CRATNFIGVAEKA--FWLSVHGPRAAE 223 (241)
T ss_dssp EEEECSSCEEEEE--EEEEC-------
T ss_pred EEEecCcceEEEE--EEEEecCCCCCC
Confidence 999999 777767 889998877643
No 276
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.43 E-value=4.3e-12 Score=91.20 Aligned_cols=87 Identities=17% Similarity=0.235 Sum_probs=59.2
Q ss_pred CceeEEecCCcEEEEEEEeecC--CCeeEEEeC--CEE---e--------------ccCcceEEEEe--cceEEEEEccc
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKD--NVE---I--------------TTNKRLKIQFK--KKRSTLIITRI 73 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~--g~~---l--------------~~~~~~~~~~~--~~~~~L~i~~v 73 (176)
+..+.+.+|++++|.|.+.+.+ .+.+.|+|. +.. + ....++.+... ....+|.|.++
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (256)
T 3umt_A 9 SGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSL 88 (256)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCC
Confidence 3456799999999999998865 678999973 211 1 01245554432 34567999999
Q ss_pred CCCCCEEEEEEEEcC-C--CceEEEEEEEEEec
Q psy8425 74 RSEDAGRYECRGTGV-H--KDVVSAFAEVSINL 103 (176)
Q Consensus 74 ~~~d~G~Y~C~a~n~-g--~~~~s~~~~l~V~~ 103 (176)
+.+|+|.|.|.+.|. + .......+.|.|..
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~ 121 (256)
T 3umt_A 89 TSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSS 121 (256)
T ss_dssp CGGGCEEEEEEECCSTTCCSCEECCCEEEEECC
T ss_pred CcccCEEEEEEEccCCCccccEECCCEEEEEcC
Confidence 999999999999986 2 22222225666664
No 277
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.43 E-value=1.4e-12 Score=93.98 Aligned_cols=100 Identities=16% Similarity=0.188 Sum_probs=73.7
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeecCCC-----eeEEEe--CCEEec------------cCcceEEEEecc
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLP-----AVSWFK--DNVEIT------------TNKRLKIQFKKK 64 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p-----~i~W~~--~g~~l~------------~~~~~~~~~~~~ 64 (176)
.|.|..+|.+...+..+.+.+|++++|.|.+.+.|.+ .+.|+| +|..+. ...++.+.....
T Consensus 115 ~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 194 (256)
T 1nqb_A 115 TVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGT 194 (256)
T ss_dssp EEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETT
T ss_pred eeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCC
Confidence 4556667777777888889999999999999988875 899999 565431 124555444456
Q ss_pred eEEEEEcccCCCCCEEEEEEEEcCCCceEEEEEEEEEec
Q psy8425 65 RSTLIITRIRSEDAGRYECRGTGVHKDVVSAFAEVSINL 103 (176)
Q Consensus 65 ~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~s~~~~l~V~~ 103 (176)
..+|.|.+++.+|+|.|.|.+.|.+......-..|.|..
T Consensus 195 ~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 195 DFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp EEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred EEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEEC
Confidence 678999999999999999999986322222225677764
No 278
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.43 E-value=3.1e-14 Score=98.77 Aligned_cols=99 Identities=19% Similarity=0.353 Sum_probs=73.9
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEE-eecCCCeeEEEeCCEEeccCcce-------EEEEecceEEEEEcccCC
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRC-KGNPLPAVSWFKDNVEITTNKRL-------KIQFKKKRSTLIITRIRS 75 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~-~g~p~p~i~W~~~g~~l~~~~~~-------~~~~~~~~~~L~i~~v~~ 75 (176)
.|.|..+|.+........+.+|+.+.|.|.+ .+.|.|.+.|++++..+....+. ..........|.|.++..
T Consensus 101 ~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 180 (209)
T 1nbq_A 101 KLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSA 180 (209)
T ss_dssp ECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCG
T ss_pred EEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccc
Confidence 4566677776655556678999999999996 89999999999999887654321 111112457899999999
Q ss_pred CCCEEEEEEEEcC-CCceEEEEEEEEEe
Q psy8425 76 EDAGRYECRGTGV-HKDVVSAFAEVSIN 102 (176)
Q Consensus 76 ~d~G~Y~C~a~n~-g~~~~s~~~~l~V~ 102 (176)
+|+|.|+|.|.|. |....+..+.|.|.
T Consensus 181 ~d~G~Y~C~a~n~~g~~~~s~~v~l~V~ 208 (209)
T 1nbq_A 181 SDTGEYSCEARNGYGTPMTSNAVRMEAV 208 (209)
T ss_dssp GGCCCEEEEEECSSSCCEECCCBCCEEE
T ss_pred cCCeEEEEEEeCCcCcccccccEEEEEe
Confidence 9999999999999 77644533555553
No 279
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.43 E-value=1.2e-13 Score=102.44 Aligned_cols=95 Identities=22% Similarity=0.320 Sum_probs=73.9
Q ss_pred CccccCCCeEE-eCCceeEEecCCcEEEEEEEeecCCCe-eEEEeCCEEeccCcceEEEEecceEEEEEc-ccCCCCCEE
Q psy8425 4 GLRATIHPIEV-SGLRNVSVKLRQSLRLVCRCKGNPLPA-VSWFKDNVEITTNKRLKIQFKKKRSTLIIT-RIRSEDAGR 80 (176)
Q Consensus 4 ~l~v~~~p~~~-~~~~~~~v~~G~~~~l~C~~~g~p~p~-i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~-~v~~~d~G~ 80 (176)
.|.|..+|.+. ..+....+.+|+.+.|.|.+.|.|.|. +.|++++..+..... ..+.+|.|. ++..+|+|.
T Consensus 225 ~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~~------~~~~~L~i~~~v~~~d~G~ 298 (331)
T 3u83_A 225 TLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVE------AQNRTLFFKGPINYSLAGT 298 (331)
T ss_dssp ECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEE------EETTEEEECSCCCGGGCEE
T ss_pred EEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccce------ecCcEEEEeCCCccccCeE
Confidence 45666777765 344555688999999999999999998 999999988765321 134589999 999999999
Q ss_pred EEEEEEcC-CCceEEEEEEEEEecCCC
Q psy8425 81 YECRGTGV-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 81 Y~C~a~n~-g~~~~s~~~~l~V~~~p~ 106 (176)
|+|.|.|. |....+ +.|.|...+.
T Consensus 299 Y~C~a~N~~G~~~~~--~~l~V~~~~~ 323 (331)
T 3u83_A 299 YICEATNPIGTRSGQ--VEVNITEAAA 323 (331)
T ss_dssp EEEEEEETTEEEEEE--EEECCBC---
T ss_pred EEEEEEeccccceEE--EEEEEeccch
Confidence 99999999 776666 8888877554
No 280
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.43 E-value=4.3e-13 Score=100.49 Aligned_cols=85 Identities=18% Similarity=0.266 Sum_probs=60.9
Q ss_pred CCceeEEecCCcEEEEEEEeecC--CCeeEEEeC--CEEec-----------------cCcceEEEEe--cceEEEEEcc
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKD--NVEIT-----------------TNKRLKIQFK--KKRSTLIITR 72 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i~~ 72 (176)
.+..+.+.+|+++.|.|.+.+.+ .+.+.|+|+ +..+. ...|+.+... ....+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (344)
T 1za6_B 6 QSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSS 85 (344)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECC
Confidence 34567899999999999998874 578999986 33221 1245555432 3457899999
Q ss_pred cCCCCCEEEEEEEEcC-CCceEEEEEEEEEe
Q psy8425 73 IRSEDAGRYECRGTGV-HKDVVSAFAEVSIN 102 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~ 102 (176)
++.+|+|.|.|.+.|. +..... +.|.|.
T Consensus 86 v~~~D~G~Y~C~~~n~~~~~~~~--~~l~V~ 114 (344)
T 1za6_B 86 LRSEDTAVYFCTRSLNMAYWGQG--TLVTVS 114 (344)
T ss_dssp CCGGGCEEEEEEETTTTCEECCC--EEEEEC
T ss_pred CCcccCEEEEEEEecCcceecCc--EEEEEe
Confidence 9999999999999986 322233 556665
No 281
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.43 E-value=2e-13 Score=106.59 Aligned_cols=84 Identities=23% Similarity=0.473 Sum_probs=65.8
Q ss_pred CCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcc-eEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CCceE
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKR-LKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HKDVV 93 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~ 93 (176)
.+..+.+.+|+++.|.|.+.|.|.|.+.|++++..+..... .++.. ...++|.|.+++.+|+|.|+|.|.|. |....
T Consensus 391 ~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~ 469 (477)
T 2id5_A 391 KAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTV-FPDGTLEVRYAQVQDNGTYLCIAANAGGNDSM 469 (477)
T ss_dssp SCEEEEEETTCCEEECCCEEEESCCEEEEECTTSCBC-------CEE-CTTSCEEESSCCSTTCEEEEEEEEETTEEEEE
T ss_pred ccccEEEeCCCeEEEEEeccccCCCEEEEEECCccccccCCCceEEe-CCCCEEEEeeCChHHCEEEEEEEEeCCCcEEE
Confidence 45778899999999999999999999999999877653211 11222 33467999999999999999999999 77666
Q ss_pred EEEEEEEEe
Q psy8425 94 SAFAEVSIN 102 (176)
Q Consensus 94 s~~~~l~V~ 102 (176)
+ +.|.|.
T Consensus 470 ~--~~l~V~ 476 (477)
T 2id5_A 470 P--AHLHVR 476 (477)
T ss_dssp E--EEEEEE
T ss_pred E--EEEEEe
Confidence 6 777775
No 282
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.42 E-value=4.4e-13 Score=101.35 Aligned_cols=81 Identities=19% Similarity=0.355 Sum_probs=65.2
Q ss_pred CceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccC----cceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CCc
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTN----KRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HKD 91 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~----~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~ 91 (176)
+.++.+.+|+++.|.|.+.| |.|.+.|++++..+... .++.+ ..++|.|.+++.+|+|.|+|.|.|. |..
T Consensus 253 ~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~----~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~ 327 (361)
T 2xot_A 253 ESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV----RNGDLFFKKVQVEDGGVYTCYAMGETFNE 327 (361)
T ss_dssp CCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE----ETTEEEESSCCTTSCEEEEEEEECSSCEE
T ss_pred ccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe----ecCeEEEeecCcccCEEEEEEEecCCCcc
Confidence 45678999999999999999 99999999977654332 23333 3457999999999999999999999 777
Q ss_pred eEEEEEEEEEecC
Q psy8425 92 VVSAFAEVSINLR 104 (176)
Q Consensus 92 ~~s~~~~l~V~~~ 104 (176)
..+ +.|.|...
T Consensus 328 ~~~--~~l~V~~~ 338 (361)
T 2xot_A 328 TLS--VELKVYNF 338 (361)
T ss_dssp EEE--EEEEEESS
T ss_pred EEE--EEEEEEee
Confidence 666 88888653
No 283
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.42 E-value=6.3e-13 Score=93.46 Aligned_cols=92 Identities=17% Similarity=0.343 Sum_probs=69.6
Q ss_pred CceeEEecCCcEEEEEEEeecCCCeeEEEe----CCEEeccCcceEEEE--e-----cceEEEEEcccCCCCCEEEEEEE
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNPLPAVSWFK----DNVEITTNKRLKIQF--K-----KKRSTLIITRIRSEDAGRYECRG 85 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~----~g~~l~~~~~~~~~~--~-----~~~~~L~i~~v~~~d~G~Y~C~a 85 (176)
+....+.+|+.+.|.|.+.+.|.|.+.|++ +|..+..+....... . .....|.|.++..+|+|.|+|.|
T Consensus 125 ~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 204 (231)
T 3ojm_B 125 PANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKV 204 (231)
T ss_dssp SCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEE
T ss_pred CCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEE
Confidence 566788999999999999999999999999 887775433221111 0 22357999999999999999999
Q ss_pred EcC-CCceEEEEEEEEEecCCCCCCC
Q psy8425 86 TGV-HKDVVSAFAEVSINLRPDNMGG 110 (176)
Q Consensus 86 ~n~-g~~~~s~~~~l~V~~~p~~~g~ 110 (176)
.|. |....+ +.|.|..+|...+.
T Consensus 205 ~n~~g~~~~~--~~l~V~~~p~~p~~ 228 (231)
T 3ojm_B 205 SNYIGQANQS--AWLTVLPKQQAPGR 228 (231)
T ss_dssp EETTEEEEEE--EEEEEECCC-----
T ss_pred EeccceEeeE--EEEEEecCCCCCcc
Confidence 999 777666 89999988776554
No 284
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.42 E-value=1.5e-12 Score=84.97 Aligned_cols=94 Identities=19% Similarity=0.233 Sum_probs=67.0
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeC--CEE---e-ccCcceEEEEecceEEEEEcccCCCCCEEEEEE
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKD--NVE---I-TTNKRLKIQFKKKRSTLIITRIRSEDAGRYECR 84 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~--g~~---l-~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 84 (176)
..+...+..+.+.+|++++|.|.+.+. +.+.|+|+ +.. + ....++.+.......+|.|.+++.+|+|.|.|.
T Consensus 18 ~~v~q~p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~ 95 (133)
T 3khq_A 18 SQIWQHPRFAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCK 95 (133)
T ss_dssp CSEEEECSEEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CceEEcCceEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEcCCCEEEEEECCCChHHCEEEEEE
Confidence 356677888999999999999999877 88999996 322 1 234667666555667899999999999999999
Q ss_pred EEcC-CCc--eEEEEEEEEEecCCC
Q psy8425 85 GTGV-HKD--VVSAFAEVSINLRPD 106 (176)
Q Consensus 85 a~n~-g~~--~~s~~~~l~V~~~p~ 106 (176)
+.|. +.. ....-..|.|...|.
T Consensus 96 a~n~~g~~~~~~g~gt~L~V~~~p~ 120 (133)
T 3khq_A 96 QKCDSANHNVTDSCGTELLVLGFST 120 (133)
T ss_dssp ESSCC-------CCCEEEEEC----
T ss_pred EEeCCCCcceeECCCEEEEEEeccc
Confidence 9987 421 112226788877554
No 285
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.42 E-value=3e-14 Score=100.10 Aligned_cols=85 Identities=16% Similarity=0.248 Sum_probs=57.2
Q ss_pred ceeEEecCCcEEEEEEEeecCC-----CeeEEEeCCEEec-------------cCcceEEEE---ecceEEEEEcccCCC
Q psy8425 18 RNVSVKLRQSLRLVCRCKGNPL-----PAVSWFKDNVEIT-------------TNKRLKIQF---KKKRSTLIITRIRSE 76 (176)
Q Consensus 18 ~~~~v~~G~~~~l~C~~~g~p~-----p~i~W~~~g~~l~-------------~~~~~~~~~---~~~~~~L~i~~v~~~ 76 (176)
+.+.+.+|+++.|.|.+.+.|. +.+.|++++.... ...+..+.. ...+.+|.|.+++.+
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~ 82 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVT 82 (222)
T ss_dssp CCCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGG
T ss_pred CCEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccc
Confidence 3456889999999999988764 6899999763321 011211100 012578999999999
Q ss_pred CCEEEEEEEEcCCCceEEEEEEEEEecC
Q psy8425 77 DAGRYECRGTGVHKDVVSAFAEVSINLR 104 (176)
Q Consensus 77 d~G~Y~C~a~n~g~~~~s~~~~l~V~~~ 104 (176)
|+|.|+|.+.+.+..... +.|.|..+
T Consensus 83 D~G~Y~C~~~~~~~~~~~--~~l~V~~~ 108 (222)
T 4i0k_A 83 DEGSYTCFVSIQDFDSAA--VSLQVAAP 108 (222)
T ss_dssp GCSCEEEEEEECCCCCCC--CCCCCCBC
T ss_pred cCEEEEEEEEeCCCceEE--EEEEEEcC
Confidence 999999999987433333 55555543
No 286
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=99.42 E-value=5e-12 Score=79.54 Aligned_cols=78 Identities=13% Similarity=0.257 Sum_probs=60.5
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--E---Eec---------cCcceEEEEecceEEEEEcccCCC
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--V---EIT---------TNKRLKIQFKKKRSTLIITRIRSE 76 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~---~l~---------~~~~~~~~~~~~~~~L~i~~v~~~ 76 (176)
+.+...+..+.+.+|++++|.|.+.+.+.+.+.|+|+. . .+. ...++.+.......+|.|.+++.+
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 83 (109)
T 2q20_A 4 IQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPE 83 (109)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred ccEEeeCCEEEecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCChh
Confidence 44556677889999999999999988888899999853 1 111 124555544455678999999999
Q ss_pred CCEEEEEEEEcC
Q psy8425 77 DAGRYECRGTGV 88 (176)
Q Consensus 77 d~G~Y~C~a~n~ 88 (176)
|+|.|.|.+.+.
T Consensus 84 DsG~Y~C~~~~~ 95 (109)
T 2q20_A 84 DIATYYCQQYDN 95 (109)
T ss_dssp GCEEEEEEECSS
T ss_pred hCEEEEEEEeeC
Confidence 999999999885
No 287
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.42 E-value=6.1e-12 Score=89.71 Aligned_cols=76 Identities=16% Similarity=0.296 Sum_probs=58.2
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeC--CEEe--------------ccCcceEEEE-ecceEEEEEcccC
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKD--NVEI--------------TTNKRLKIQF-KKKRSTLIITRIR 74 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~--g~~l--------------~~~~~~~~~~-~~~~~~L~i~~v~ 74 (176)
.+...+..+.+.+|++++|.|.+.+.+.+.+.|+|. +..+ ....++.+.. .....+|.|.+++
T Consensus 3 ~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~ 82 (245)
T 3nfj_J 3 TIHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLL 82 (245)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCC
T ss_pred eeeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCC
Confidence 355667788999999999999999989999999982 2110 0113444433 2456789999999
Q ss_pred CCCCEEEEEEEEc
Q psy8425 75 SEDAGRYECRGTG 87 (176)
Q Consensus 75 ~~d~G~Y~C~a~n 87 (176)
.+|+|.|.|.+.+
T Consensus 83 ~~D~G~Y~C~~~~ 95 (245)
T 3nfj_J 83 LSDSGFYLCAWSV 95 (245)
T ss_dssp GGGCEEEEEEEEC
T ss_pred hhhCEEEEEEEee
Confidence 9999999999999
No 288
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.41 E-value=1.7e-12 Score=93.35 Aligned_cols=97 Identities=16% Similarity=0.236 Sum_probs=70.6
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeC--CEEec------------cCcceEEEEecceEEEEEcccCC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKD--NVEIT------------TNKRLKIQFKKKRSTLIITRIRS 75 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~i~~v~~ 75 (176)
+|.+...+..+.+.+|++++|.|.+.+.|.+.+.|+|+ +..+. ...++.+.......+|.|.+++.
T Consensus 138 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 217 (256)
T 3umt_A 138 DIQLTQSPSSLSASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLES 217 (256)
T ss_dssp CCCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCG
T ss_pred ccEEEcCCCeEEEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCCh
Confidence 66777778888999999999999999999899999983 22221 12455554445667899999999
Q ss_pred CCCEEEEEEEEcCCCceEEEEEEEEEecCCC
Q psy8425 76 EDAGRYECRGTGVHKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 76 ~d~G~Y~C~a~n~g~~~~s~~~~l~V~~~p~ 106 (176)
+|+|.|.|.+.|.+......-..|.|..++.
T Consensus 218 ~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~~~ 248 (256)
T 3umt_A 218 EDFVDYYCLQYASSPPTFGGGTKLEIKRAAA 248 (256)
T ss_dssp GGCSEEEEEECSSSSCEECCCEEEEEC----
T ss_pred hHCEEEEEEEeeCCCcEECCCEEEEEECCCc
Confidence 9999999999987333333237788876543
No 289
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.41 E-value=8e-12 Score=90.32 Aligned_cols=93 Identities=15% Similarity=0.148 Sum_probs=62.4
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEe--CCEEe------------ccC----cceEEEEe-cceEEEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFK--DNVEI------------TTN----KRLKIQFK-KKRSTLII 70 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~--~g~~l------------~~~----~~~~~~~~-~~~~~L~i 70 (176)
.+.+...+..+.+.+|++++|.|.+. .+.+.+.|+| .+..+ ... .++.+... ....+|.|
T Consensus 26 ~~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (268)
T 3pl6_D 26 GAGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKI 104 (268)
T ss_dssp -SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEE
T ss_pred CceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEE
Confidence 34556667788999999999999976 5778999998 22211 111 44444321 23678999
Q ss_pred cccCCCCCEEEEEEEEcC-CCceEEEEEEEEEec
Q psy8425 71 TRIRSEDAGRYECRGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 71 ~~v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~ 103 (176)
.+++.+|+|.|.|.+.+. ..........|.|..
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~ 138 (268)
T 3pl6_D 105 QRTERGDSAVYLCATSALGDTQYFGPGTRLTVLE 138 (268)
T ss_dssp CSCCGGGCEEEEEEEESSSSSCEECCCEEEEEES
T ss_pred CCCCcccCEEEEEEEecCCCceeeCCcEEEEEec
Confidence 999999999999999974 222222114566654
No 290
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.41 E-value=2.6e-12 Score=90.05 Aligned_cols=88 Identities=23% Similarity=0.311 Sum_probs=68.1
Q ss_pred CeEEeCCc-eeEEecCCcEEEEEEEeecCCC--eeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 11 PIEVSGLR-NVSVKLRQSLRLVCRCKGNPLP--AVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 11 p~~~~~~~-~~~v~~G~~~~l~C~~~g~p~p--~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
+..+.++. ++.+..|++++|.|.+ +.|.| .+.|++.+..+ .+ .........|.|.+++.+|+|.|.|.+.|
T Consensus 7 ~~~V~pp~~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~--~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n 80 (210)
T 1gsm_A 7 PLQVEPPEPVVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GA--VQSDTGRSVLTVRNASLSAAGTRVCVGSC 80 (210)
T ss_dssp SEEEESCCSEEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CC--EEEESSEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CEEEeCCCCceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---Cc--EEecCCccEEEECccCcccCceEEEEEEe
Confidence 33334444 3689999999999999 88888 99999965443 11 22225678899999999999999999999
Q ss_pred C-CCceEEEEEEEEEecCCC
Q psy8425 88 V-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 88 ~-g~~~~s~~~~l~V~~~p~ 106 (176)
. +..... +.|.|..+|.
T Consensus 81 ~~~~~~~~--~~ltV~~~P~ 98 (210)
T 1gsm_A 81 GGRTFQHT--VQLLVYAFPN 98 (210)
T ss_dssp TTEEEEEE--EEEEEEBCCS
T ss_pred CCCceEEE--EEEEEEecCC
Confidence 8 655556 8999998875
No 291
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.41 E-value=7.2e-13 Score=90.55 Aligned_cols=78 Identities=15% Similarity=0.166 Sum_probs=64.8
Q ss_pred CceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CCceEEE
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HKDVVSA 95 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~s~ 95 (176)
+....+.+|+++.|.|.+.+.|.|.+.|++++..+. .....|.|.+++.+|+|.|+|.|.|. +....+
T Consensus 104 ~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~----------~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~- 172 (184)
T 2ny1_B 104 NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI----------QGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFK- 172 (184)
T ss_dssp SSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEE----------EESSEEEESSCCGGGCEEEEEEEEETTEEEEEE-
T ss_pred CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCccc----------cCceEEEEecCCcCCCeEEEEEEEECCceEEEE-
Confidence 445578999999999999999999999999875542 23468999999999999999999998 666666
Q ss_pred EEEEEEecCCC
Q psy8425 96 FAEVSINLRPD 106 (176)
Q Consensus 96 ~~~l~V~~~p~ 106 (176)
+.|.|...|.
T Consensus 173 -~~l~V~~~p~ 182 (184)
T 2ny1_B 173 -IDIVVLAFQK 182 (184)
T ss_dssp -EEEEEECCCC
T ss_pred -EEEEEEecCC
Confidence 8888887664
No 292
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.41 E-value=8.2e-13 Score=92.92 Aligned_cols=72 Identities=24% Similarity=0.322 Sum_probs=53.8
Q ss_pred CceeEEecCCcEEEEEEEeecC--CCeeEEEeCC--EE---ec----------------cCcceEEEEe--cceEEEEEc
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDN--VE---IT----------------TNKRLKIQFK--KKRSTLIIT 71 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g--~~---l~----------------~~~~~~~~~~--~~~~~L~i~ 71 (176)
+..+.+.+|++++|.|.+.+.+ .+.+.|+|+. .. +. ...++.+... ....+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMN 86 (222)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred CCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEEC
Confidence 4456789999999999998765 6789999842 21 10 1234544432 245689999
Q ss_pred ccCCCCCEEEEEEEEcC
Q psy8425 72 RIRSEDAGRYECRGTGV 88 (176)
Q Consensus 72 ~v~~~d~G~Y~C~a~n~ 88 (176)
+++.+|+|.|.|.+.+.
T Consensus 87 ~v~~~D~G~Y~C~~~~~ 103 (222)
T 1q9r_B 87 TLRAEDSATYYCARDHD 103 (222)
T ss_dssp SCCGGGCEEEEEEECCC
T ss_pred cCCcccCeEEEEEEecc
Confidence 99999999999999987
No 293
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.41 E-value=3.9e-13 Score=97.07 Aligned_cols=77 Identities=16% Similarity=0.259 Sum_probs=58.3
Q ss_pred EEecCCcEEEEEEEee-cCCC--eeEEEeCCEEeccCcceEEEEecceEEEEEccc---CCCCCEE--EEEEEEcC-CCc
Q psy8425 21 SVKLRQSLRLVCRCKG-NPLP--AVSWFKDNVEITTNKRLKIQFKKKRSTLIITRI---RSEDAGR--YECRGTGV-HKD 91 (176)
Q Consensus 21 ~v~~G~~~~l~C~~~g-~p~p--~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v---~~~d~G~--Y~C~a~n~-g~~ 91 (176)
.+.+|+.+.|.|.+.| .|.| .+.|+|+|..+.. .+.. ....+.+..+ +.+|+|. |+|.+.|. +..
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~----~~~~--~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~ 87 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP----TVTY--GNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQ 87 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC----EEEE--CSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEE
T ss_pred eEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc----eEee--CCCeEEEEeecccccccCCcceEEEEEecCCCCc
Confidence 6889999999999998 7777 9999999998865 2222 2234555554 7788885 99999999 666
Q ss_pred eEEEEEEEEEecCC
Q psy8425 92 VVSAFAEVSINLRP 105 (176)
Q Consensus 92 ~~s~~~~l~V~~~p 105 (176)
..+ +.|.|...|
T Consensus 88 ~~~--~~l~V~~~p 99 (265)
T 2oz4_A 88 ETL--QTVTIYSFP 99 (265)
T ss_dssp EEE--EEEEEECCC
T ss_pred EEE--EEEEEeCCC
Confidence 556 888887633
No 294
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.40 E-value=1.6e-12 Score=91.27 Aligned_cols=86 Identities=21% Similarity=0.310 Sum_probs=59.7
Q ss_pred CceeEEecCCcEEEEEEEeecC--CCeeEEEeCC--EE---e-c--c-------------CcceEEEEe--cceEEEEEc
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDN--VE---I-T--T-------------NKRLKIQFK--KKRSTLIIT 71 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g--~~---l-~--~-------------~~~~~~~~~--~~~~~L~i~ 71 (176)
+..+.+.+|++++|.|.+.+.+ .+.+.|+|++ .. + . . ..|+.+... ....+|.|.
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMN 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEc
Confidence 5567899999999999998866 6789999853 11 1 0 0 245554432 234589999
Q ss_pred ccCCCCCEEEEEEEEcC-CCc-eEEEEEEEEEe
Q psy8425 72 RIRSEDAGRYECRGTGV-HKD-VVSAFAEVSIN 102 (176)
Q Consensus 72 ~v~~~d~G~Y~C~a~n~-g~~-~~s~~~~l~V~ 102 (176)
+++.+|+|.|.|.+.+. +.. .....+.|.|.
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~ 119 (220)
T 1pz5_B 87 NLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVS 119 (220)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEEC
T ss_pred cCCHHHCEEEEEEEecCCcccceECCCEEEEEc
Confidence 99999999999999997 321 11111566665
No 295
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.40 E-value=6.9e-12 Score=89.18 Aligned_cols=75 Identities=20% Similarity=0.277 Sum_probs=55.6
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEe--------------CCEEecc---CcceEEEEe-cceEEEEEccc
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFK--------------DNVEITT---NKRLKIQFK-KKRSTLIITRI 73 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~--------------~g~~l~~---~~~~~~~~~-~~~~~L~i~~v 73 (176)
.+...+..+.+.+|+++.|.|.+.+ +.+.+.|+| ++..... ..++.+... ....+|.|.++
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v 82 (240)
T 3q5y_A 4 GVVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSAL 82 (240)
T ss_dssp CCEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSC
T ss_pred ccccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcC
Confidence 4556677788999999999999875 778999998 2221111 134444432 34678999999
Q ss_pred CCCCCEEEEEEEEc
Q psy8425 74 RSEDAGRYECRGTG 87 (176)
Q Consensus 74 ~~~d~G~Y~C~a~n 87 (176)
+.+|+|.|.|.+.+
T Consensus 83 ~~~D~G~Y~C~~~~ 96 (240)
T 3q5y_A 83 ELEDSAMYFCASSL 96 (240)
T ss_dssp CGGGCEEEEEEEES
T ss_pred ChhHCEEEEEEEcc
Confidence 99999999999983
No 296
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.39 E-value=1.9e-12 Score=93.20 Aligned_cols=94 Identities=11% Similarity=0.178 Sum_probs=52.5
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeC--CEE---ecc-C-------------cceEEEE--ecceEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKD--NVE---ITT-N-------------KRLKIQF--KKKRSTL 68 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~--g~~---l~~-~-------------~~~~~~~--~~~~~~L 68 (176)
+|.+...+..+.+.+|++++|.|.+.+.+.+.+.|+|. +.. +.. . .+..... .....+|
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 81 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRM 81 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEE
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEE
Confidence 45666777888999999999999999999899999982 111 100 0 0111111 1234579
Q ss_pred EEcccCCCCCEEEEEEEEcC-CCc-eEEEEEEEEEec
Q psy8425 69 IITRIRSEDAGRYECRGTGV-HKD-VVSAFAEVSINL 103 (176)
Q Consensus 69 ~i~~v~~~d~G~Y~C~a~n~-g~~-~~s~~~~l~V~~ 103 (176)
.|.+++.+|+|.|.|.+.|. +.. .......|.|..
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~ 118 (259)
T 3omz_A 82 ILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTD 118 (259)
T ss_dssp EESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC
T ss_pred EECCCCcccCEEEEEEEeeCCccccEECCCCEEEEec
Confidence 99999999999999999987 421 122225566654
No 297
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.39 E-value=2.3e-12 Score=89.15 Aligned_cols=91 Identities=11% Similarity=0.091 Sum_probs=59.1
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcce-EEEE-ecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRL-KIQF-KKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~-~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
+|.+...+ ...+.+|++++|.|.+.+. .+.+.|+|+|..+...... .... ......|.|.+++.+|+|.|+|.|.|
T Consensus 101 ~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 178 (198)
T 1ugn_A 101 KPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYD 178 (198)
T ss_dssp CCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEEC
T ss_pred CCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEe
Confidence 45554433 3678899999999999988 7899999999877542211 1111 12357899999999999999999999
Q ss_pred C-CCce---EEEEEEEEEe
Q psy8425 88 V-HKDV---VSAFAEVSIN 102 (176)
Q Consensus 88 ~-g~~~---~s~~~~l~V~ 102 (176)
. +... .+..+.|.|.
T Consensus 179 ~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 179 SNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp TTSTTEECCCCCCEEEEEE
T ss_pred CCCCccccCcCceEEEEec
Confidence 8 4221 2333666664
No 298
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.38 E-value=5.4e-13 Score=93.92 Aligned_cols=84 Identities=18% Similarity=0.224 Sum_probs=58.1
Q ss_pred cCCCeEEeCCceeE--EecCCcEEEEEEEeec---CC-CeeEEEeCCEEeccCcceEEEEe-----cceEEEEEcccCCC
Q psy8425 8 TIHPIEVSGLRNVS--VKLRQSLRLVCRCKGN---PL-PAVSWFKDNVEITTNKRLKIQFK-----KKRSTLIITRIRSE 76 (176)
Q Consensus 8 ~~~p~~~~~~~~~~--v~~G~~~~l~C~~~g~---p~-p~i~W~~~g~~l~~~~~~~~~~~-----~~~~~L~i~~v~~~ 76 (176)
..+|.+...+.... +.+|+++.|.|.+.|. |. +.+.|+|++..+........... ...+.|.|.+++.+
T Consensus 7 ~~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~ 86 (218)
T 2rgs_A 7 EGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWM 86 (218)
T ss_dssp --CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHH
T ss_pred CCCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcC
Confidence 34566544444444 7899999999999987 33 68999999987754211100000 12457999999999
Q ss_pred CCEEEEEEEEcC-CCc
Q psy8425 77 DAGRYECRGTGV-HKD 91 (176)
Q Consensus 77 d~G~Y~C~a~n~-g~~ 91 (176)
|+|.|+|.+.|. +..
T Consensus 87 D~g~Y~C~~~~~~~~~ 102 (218)
T 2rgs_A 87 SGKEFKCKVNNKDLPS 102 (218)
T ss_dssp TTCCEEEEEEETTCSS
T ss_pred CCCeEEEEEECCcCCC
Confidence 999999999998 543
No 299
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.38 E-value=2e-12 Score=87.06 Aligned_cols=89 Identities=16% Similarity=0.264 Sum_probs=65.1
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEe-ecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEE
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCK-GNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~-g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 82 (176)
.|.|..+|.+...+ ...+.+|+.+.|.|.+. +.|.+.+.|+++|..+... .....|.|.++..+|+|.|+
T Consensus 80 ~l~v~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~--------~~~~~L~i~~v~~~d~G~Y~ 150 (170)
T 3ry4_A 80 HLTVLFEWLVLQTP-HLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFS--------HLDPTFSIPQANHSHSGDYH 150 (170)
T ss_dssp EEEEECCSEEEECS-CSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEE--------SSCCEEEESSCCGGGCEEEE
T ss_pred EEEEECCceEecCC-CceeecCCeEEEEEECCCCCCCceEEEEECCeEcccc--------CCCCeEEEEeccccCCEEEE
Confidence 34555666554443 45688999999999995 4566899999999876531 34568999999999999999
Q ss_pred EEEEcCCCceEEEEEEEEE
Q psy8425 83 CRGTGVHKDVVSAFAEVSI 101 (176)
Q Consensus 83 C~a~n~g~~~~s~~~~l~V 101 (176)
|.|.|..+...+..+.|.|
T Consensus 151 C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 151 CTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp EEEEETTEEEECCCEEEEE
T ss_pred EEEEeCcCccccccEEEEE
Confidence 9999983233332256655
No 300
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.38 E-value=3.5e-12 Score=81.40 Aligned_cols=87 Identities=15% Similarity=0.182 Sum_probs=62.1
Q ss_pred CCceeEEecCCcEEEEEEEeec--CCCeeEEEeCCEEecc-------------CcceEEEEecceEEEEEcccCCCCCEE
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKGN--PLPAVSWFKDNVEITT-------------NKRLKIQFKKKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g~--p~p~i~W~~~g~~l~~-------------~~~~~~~~~~~~~~L~i~~v~~~d~G~ 80 (176)
.+..+.+.+|++++|.|...+. +.+.+.|+|++..+.. ..|+. + ..+.+|.|.+++.+|+|.
T Consensus 9 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~--~-~~~~sL~I~~v~~~D~G~ 85 (117)
T 3q0h_A 9 TTGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVA--P-GPGLGLTLQSLTVNDTGE 85 (117)
T ss_dssp ESCCEEEETTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEE--E-CSTTCEEECSCCGGGCEE
T ss_pred ccCCEEEecCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEE--e-CCceEEEEeeCChhhCEE
Confidence 4556789999999999998863 3347899998654321 12332 2 335689999999999999
Q ss_pred EEEEEEc-C-CCceEEEEEEEEEecCCCC
Q psy8425 81 YECRGTG-V-HKDVVSAFAEVSINLRPDN 107 (176)
Q Consensus 81 Y~C~a~n-~-g~~~~s~~~~l~V~~~p~~ 107 (176)
|.|.+.+ . +..... +.|.|.+||..
T Consensus 86 Y~C~v~~~~~g~~~~~--~~L~V~~pp~~ 112 (117)
T 3q0h_A 86 YFCIYHTYPDGTYTGR--IFLEVLESSVA 112 (117)
T ss_dssp EEEEEEEETTCCEEEE--EEEEEECC---
T ss_pred EEEEEEECCCCCeEEE--EEEEEEccCcc
Confidence 9999765 4 555555 89999988764
No 301
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.38 E-value=4.3e-12 Score=88.94 Aligned_cols=102 Identities=18% Similarity=0.245 Sum_probs=66.2
Q ss_pred CccccCC---CeEEeCCceeEEecCCcEEEEEEE-eecCCCeeEEEe-CCEEeccCcceEEEEe--cceEEEEEcccCCC
Q psy8425 4 GLRATIH---PIEVSGLRNVSVKLRQSLRLVCRC-KGNPLPAVSWFK-DNVEITTNKRLKIQFK--KKRSTLIITRIRSE 76 (176)
Q Consensus 4 ~l~v~~~---p~~~~~~~~~~v~~G~~~~l~C~~-~g~p~p~i~W~~-~g~~l~~~~~~~~~~~--~~~~~L~i~~v~~~ 76 (176)
.|.|..+ |.+...+ ...+.+|+.+.|.|.+ .+.|.|.+.|++ ++..+........... .....|.|.++..+
T Consensus 102 ~l~V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~ 180 (222)
T 4i0k_A 102 SLQVAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLG 180 (222)
T ss_dssp CCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEEEcCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeC
Confidence 3445443 5555443 3467889999999999 888999999999 5555543222111111 11235889999999
Q ss_pred CCEEEEEEEEcC-CCceEEEEEEEEEecCCCCC
Q psy8425 77 DAGRYECRGTGV-HKDVVSAFAEVSINLRPDNM 108 (176)
Q Consensus 77 d~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p~~~ 108 (176)
|+|.|+|.|.|. +....+ +.|.|..+|...
T Consensus 181 d~G~Y~C~a~n~~g~~~~~--~~l~V~~~p~~~ 211 (222)
T 4i0k_A 181 ANGTYSCLVRNPVLQQDAH--GSVTITGQPLTF 211 (222)
T ss_dssp TTCEEEEEEEETTTTEEEE--EEEECCC-----
T ss_pred CCCEEEEEEECCCCCCceE--EEEEEeCCcccc
Confidence 999999999999 877777 889888877533
No 302
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.38 E-value=6e-13 Score=92.91 Aligned_cols=80 Identities=16% Similarity=0.255 Sum_probs=56.6
Q ss_pred eEEeCCceeE-EecCCcEEEEEEEeecC---C-CeeEEEeCCEEeccCcc-eEEEEe----cceEEEEEcccCCCCCEEE
Q psy8425 12 IEVSGLRNVS-VKLRQSLRLVCRCKGNP---L-PAVSWFKDNVEITTNKR-LKIQFK----KKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 12 ~~~~~~~~~~-v~~G~~~~l~C~~~g~p---~-p~i~W~~~g~~l~~~~~-~~~~~~----~~~~~L~i~~v~~~d~G~Y 81 (176)
.++.++.... +.+|+++.|.|.+.|.| . ..+.|+|++..+..... ...... .....|.|.+++.+|+|.|
T Consensus 4 v~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y 83 (207)
T 2vol_A 4 VFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEF 83 (207)
T ss_dssp EEEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCE
T ss_pred EEEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEE
Confidence 3455555444 78999999999999885 3 38999999977653110 000000 1235799999999999999
Q ss_pred EEEEEcC-CCc
Q psy8425 82 ECRGTGV-HKD 91 (176)
Q Consensus 82 ~C~a~n~-g~~ 91 (176)
+|.|.|. +..
T Consensus 84 ~C~a~~~~~~~ 94 (207)
T 2vol_A 84 KCRVNSAAFPA 94 (207)
T ss_dssp EEEEECTTCSS
T ss_pred EEEEEccCCCC
Confidence 9999998 543
No 303
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.38 E-value=7.2e-12 Score=89.29 Aligned_cols=77 Identities=17% Similarity=0.210 Sum_probs=57.5
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEe--------------CCEEeccC----cceEEEEe-cceEEEEEc
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFK--------------DNVEITTN----KRLKIQFK-KKRSTLIIT 71 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~--------------~g~~l~~~----~~~~~~~~-~~~~~L~i~ 71 (176)
+.+...+..+.+.+|++++|.| ..+.+.+.+.|+| ++...... .++.+... ....+|.|.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 81 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQ 81 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEEC
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEEC
Confidence 4456667788999999999999 6778889999998 22222111 45444321 345689999
Q ss_pred ccCCCCCEEEEEEEEcC
Q psy8425 72 RIRSEDAGRYECRGTGV 88 (176)
Q Consensus 72 ~v~~~d~G~Y~C~a~n~ 88 (176)
+++.+|+|.|.|.+.+.
T Consensus 82 ~v~~~D~G~Y~C~~~~~ 98 (245)
T 4ei6_B 82 PTALEDSAVYFCASSFW 98 (245)
T ss_dssp SCCGGGCEEEEEEEECS
T ss_pred CCCHhHCEEEEEEEccC
Confidence 99999999999999963
No 304
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.38 E-value=7.7e-13 Score=94.26 Aligned_cols=73 Identities=21% Similarity=0.354 Sum_probs=57.4
Q ss_pred eCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcce----------------------EEEEecceEEEEEcc
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRL----------------------KIQFKKKRSTLIITR 72 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~----------------------~~~~~~~~~~L~i~~ 72 (176)
..+..+.+.+|+.+.|.|.+.+.|.|.+.|+|++..+...... .... .....|.|.+
T Consensus 141 ~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~ 219 (250)
T 2fbo_J 141 STAEVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASF-SGARNLVIRA 219 (250)
T ss_dssp CCCSEEECCTTCCEEECCCEESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEE-ETTTEEEECS
T ss_pred ecCceEEecCCCcEEEEEEecCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEeccccc-CCccEEEEec
Confidence 4455677888999999999999999999999998877542211 0110 1336899999
Q ss_pred cCCCCCEEEEEEEEcC
Q psy8425 73 IRSEDAGRYECRGTGV 88 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n~ 88 (176)
++.+|+|.|+|.|.|.
T Consensus 220 v~~~D~G~Y~C~a~N~ 235 (250)
T 2fbo_J 220 AKITDAGRVWCELATG 235 (250)
T ss_dssp CCGGGCEEEEEEEESS
T ss_pred CCcccCEEEEEEecCC
Confidence 9999999999999996
No 305
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.37 E-value=4.3e-12 Score=80.38 Aligned_cols=88 Identities=22% Similarity=0.291 Sum_probs=59.1
Q ss_pred CCceeEEecCCcEEEEEEE-eecCCCe----eEEEeCCEEe-------------ccCcceEEEEe---c--ceEEEEEcc
Q psy8425 16 GLRNVSVKLRQSLRLVCRC-KGNPLPA----VSWFKDNVEI-------------TTNKRLKIQFK---K--KRSTLIITR 72 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~-~g~p~p~----i~W~~~g~~l-------------~~~~~~~~~~~---~--~~~~L~i~~ 72 (176)
.+..+.+.+|++++|.|.+ .+.+.+. +.|+|++... ....+..+... . ...+|.|.+
T Consensus 6 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~ 85 (118)
T 3udw_C 6 APTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFG 85 (118)
T ss_dssp CCSEEEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECS
T ss_pred CCCeEEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEee
Confidence 3445788999999999998 4444444 8999975321 11122222110 0 156899999
Q ss_pred cCCCCCEEEEEEEEc-C-CCceEEEEEEEEEecCC
Q psy8425 73 IRSEDAGRYECRGTG-V-HKDVVSAFAEVSINLRP 105 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n-~-g~~~~s~~~~l~V~~~p 105 (176)
++.+|+|.|.|.+.+ . +..... +.|.|.++|
T Consensus 86 v~~~D~G~Y~C~v~~~~~~~~~~~--~~L~V~~~P 118 (118)
T 3udw_C 86 LRVEDEGNYTCLFVTFPQGSRSVD--IWLRVLAKP 118 (118)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEE--EEEEEEC--
T ss_pred cChHHCeEEEEEEEECCCCCccce--EEEEEEeCC
Confidence 999999999999998 4 444444 889888765
No 306
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=99.37 E-value=1.8e-11 Score=78.27 Aligned_cols=78 Identities=14% Similarity=0.287 Sum_probs=60.4
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--E---Eec---------cCcceEEEEecceEEEEEcccCCC
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--V---EIT---------TNKRLKIQFKKKRSTLIITRIRSE 76 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~---~l~---------~~~~~~~~~~~~~~~L~i~~v~~~ 76 (176)
+.+...+..+.+.+|++++|.|.+.+.+.+.+.|+|.. . .+. ...++.+.......+|.|.+++.+
T Consensus 4 ~~v~q~p~~v~v~~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 83 (119)
T 2e27_L 4 IQMTQSPSSLSASLGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYSFSISNLEPE 83 (119)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGG
T ss_pred ceeEecCCeEEEeCCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEEEEECCCChH
Confidence 34556677788999999999999998888899999842 1 111 134555544455678999999999
Q ss_pred CCEEEEEEEEcC
Q psy8425 77 DAGRYECRGTGV 88 (176)
Q Consensus 77 d~G~Y~C~a~n~ 88 (176)
|+|.|.|.+.+.
T Consensus 84 DsG~Y~C~~~~~ 95 (119)
T 2e27_L 84 DAATYYCLQYDN 95 (119)
T ss_dssp GCEEEEEEECGG
T ss_pred HCEEEEEEEccC
Confidence 999999999885
No 307
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.37 E-value=1.8e-12 Score=91.53 Aligned_cols=72 Identities=21% Similarity=0.310 Sum_probs=54.6
Q ss_pred CceeEEecCCcEEEEEEEeecC--CCeeEEEeCC--EEec-----------------cCcceEEEEe--cceEEEEEccc
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDN--VEIT-----------------TNKRLKIQFK--KKRSTLIITRI 73 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g--~~l~-----------------~~~~~~~~~~--~~~~~L~i~~v 73 (176)
+..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ..+. ...|+.+... ....+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKM 86 (225)
T ss_dssp ECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCC
Confidence 4456899999999999998876 6789999842 2110 1245555432 24578999999
Q ss_pred CCCCCEEEEEEEEcC
Q psy8425 74 RSEDAGRYECRGTGV 88 (176)
Q Consensus 74 ~~~d~G~Y~C~a~n~ 88 (176)
+.+|+|.|.|.+.+.
T Consensus 87 ~~~D~G~Y~C~~~~~ 101 (225)
T 1op3_H 87 RVEDTAIYYCARKGS 101 (225)
T ss_dssp CGGGCEEEEEEEECC
T ss_pred ChhhCEEEEEEEecC
Confidence 999999999999997
No 308
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.37 E-value=4.4e-12 Score=89.77 Aligned_cols=74 Identities=16% Similarity=0.296 Sum_probs=55.6
Q ss_pred eCCceeEEecCCcEEEEEEEeecC--CCeeEEEeCC--EEe------c-----------cCcceEEEEe--cceEEEEEc
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDN--VEI------T-----------TNKRLKIQFK--KKRSTLIIT 71 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g--~~l------~-----------~~~~~~~~~~--~~~~~L~i~ 71 (176)
..+..+.+.+|++++|.|.+.+.+ .+.+.|+|++ ..+ . ...|+.+... ....+|.|.
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (227)
T 1mju_H 5 QQPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLS 84 (227)
T ss_dssp ECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred cCCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEEC
Confidence 345567899999999999998876 6789999853 211 0 0245554432 346789999
Q ss_pred ccCCCCCEEEEEEEEcC
Q psy8425 72 RIRSEDAGRYECRGTGV 88 (176)
Q Consensus 72 ~v~~~d~G~Y~C~a~n~ 88 (176)
+++.+|+|.|.|.+.+.
T Consensus 85 ~v~~~D~G~Y~C~~~~~ 101 (227)
T 1mju_H 85 SLTSDDSAVYYCANKLG 101 (227)
T ss_dssp SCCGGGCEEEEEEEEET
T ss_pred CCCcccCEEEEEEECCC
Confidence 99999999999999986
No 309
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=99.36 E-value=1.4e-11 Score=77.27 Aligned_cols=76 Identities=16% Similarity=0.227 Sum_probs=58.9
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--E---Eec---------cCcceEEEEecceEEEEEcccCCCCC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--V---EIT---------TNKRLKIQFKKKRSTLIITRIRSEDA 78 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~---~l~---------~~~~~~~~~~~~~~~L~i~~v~~~d~ 78 (176)
+...+..+.+.+|++++|.|.+.+.+.+.+.|+|.. . .+. ...++.+.......+|.|.+++.+|+
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 83 (107)
T 1i8k_A 4 LTQSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDV 83 (107)
T ss_dssp EEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred eEeCCCeEEecCCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCHHHC
Confidence 455577788999999999999988888899999842 1 111 12455554445567899999999999
Q ss_pred EEEEEEEEcC
Q psy8425 79 GRYECRGTGV 88 (176)
Q Consensus 79 G~Y~C~a~n~ 88 (176)
|.|.|.+.+.
T Consensus 84 G~Y~C~~~~~ 93 (107)
T 1i8k_A 84 GDYYCLQSFN 93 (107)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEEeeC
Confidence 9999999876
No 310
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.36 E-value=1.8e-11 Score=80.13 Aligned_cols=92 Identities=15% Similarity=0.244 Sum_probs=64.0
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCC---CeeEEEeCCE--Eec---------------cCcceEEEEe---cceEEEE
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPL---PAVSWFKDNV--EIT---------------TNKRLKIQFK---KKRSTLI 69 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~---p~i~W~~~g~--~l~---------------~~~~~~~~~~---~~~~~L~ 69 (176)
+..++..+.+.+|++++|.|.+.+.+. +.+.|++++. .+. ...++.+... ....+|.
T Consensus 9 V~~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~ 88 (139)
T 1pko_A 9 VIGPGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALR 88 (139)
T ss_dssp EECCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEE
T ss_pred EECCCCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEE
Confidence 344555788999999999999876543 6899999763 110 0123333211 2357899
Q ss_pred EcccCCCCCEEEEEEEEcC-CCceEEEEEEEEEecCCC
Q psy8425 70 ITRIRSEDAGRYECRGTGV-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 70 i~~v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p~ 106 (176)
|.+++.+|+|.|.|.+.+. +..... +.|.|..|+.
T Consensus 89 I~~v~~~D~G~Y~C~v~~~~~~~~~~--~~L~V~~P~~ 124 (139)
T 1pko_A 89 IQNVRFSDEGGYTCFFRDHSYQEEAA--VELKVEDPFY 124 (139)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEEEE--EEEEEECTTT
T ss_pred EccCCHHHCEEEEEEEEcCCCceEEE--EEEEEecCcC
Confidence 9999999999999999998 554444 8888885443
No 311
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.36 E-value=1.6e-13 Score=81.64 Aligned_cols=60 Identities=20% Similarity=0.408 Sum_probs=50.5
Q ss_pred CceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEccc-CCCCCEEEEEEEEc
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRI-RSEDAGRYECRGTG 87 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v-~~~d~G~Y~C~a~n 87 (176)
++...+..|++++|.|.+.|.|. ++|+|||.++... .+++|.|.++ ..+|+|.|+|.|..
T Consensus 6 p~~~v~~~G~~v~L~C~~~g~P~--i~W~kdg~~l~~~---------~~~~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 6 IEYKVSISGTSVELTCPLDSDEN--LKWEKNGQELPQK---------HDKHLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp CCCEEEEETTEEEEECSSCCCSS--CEEEETTEECTTC---------CSSCCBCCSCCTTTTCSCEEEECSS
T ss_pred CceeEEEcCCeEEEEEECCCCCc--EEEEECCEECcCC---------CCCEEEECccCccCcCEEEEEEEcc
Confidence 45566788999999999999883 9999999998752 3457999996 78999999999875
No 312
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.36 E-value=6.5e-12 Score=89.64 Aligned_cols=93 Identities=16% Similarity=0.241 Sum_probs=67.4
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEe--CCEEec------------cCcceEEEEecceEEEEEcccCC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFK--DNVEIT------------TNKRLKIQFKKKRSTLIITRIRS 75 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~--~g~~l~------------~~~~~~~~~~~~~~~L~i~~v~~ 75 (176)
++.+...+..+.+.+|++++|.|.+.+.|.+.+.|+| ++..+. ...++.+.......+|.|.+++.
T Consensus 135 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 214 (247)
T 2ghw_B 135 ETTLTQSPATLSLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEP 214 (247)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCG
T ss_pred ceEEEccCCEEEecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCH
Confidence 3446666777889999999999999999999999999 554331 12344443334567899999999
Q ss_pred CCCEEEEEEEEcCCCceEEEEEEEEEe
Q psy8425 76 EDAGRYECRGTGVHKDVVSAFAEVSIN 102 (176)
Q Consensus 76 ~d~G~Y~C~a~n~g~~~~s~~~~l~V~ 102 (176)
+|+|.|.|.|.|.+.........|.|.
T Consensus 215 ~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 215 EDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred HHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 999999999998633322222566665
No 313
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.36 E-value=9.2e-12 Score=87.15 Aligned_cols=73 Identities=22% Similarity=0.262 Sum_probs=54.6
Q ss_pred CCceeEEecCCcEEEEEEEeec--CCCeeEEEeCC--E--E-e-------------ccCcceEEEEecceEEEEEcccCC
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKGN--PLPAVSWFKDN--V--E-I-------------TTNKRLKIQFKKKRSTLIITRIRS 75 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g~--p~p~i~W~~~g--~--~-l-------------~~~~~~~~~~~~~~~~L~i~~v~~ 75 (176)
.+..+.+.+|++++|.|.+.+. +.+.+.|+|.. . . + ....++.+.......+|.|.+++.
T Consensus 5 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (215)
T 3nl4_H 5 ESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTT 84 (215)
T ss_dssp EECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCG
T ss_pred cCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCc
Confidence 4556789999999999999864 35689999732 1 1 1 012455554445567899999999
Q ss_pred CCCEEEEEEEEcC
Q psy8425 76 EDAGRYECRGTGV 88 (176)
Q Consensus 76 ~d~G~Y~C~a~n~ 88 (176)
+|+|.|.|.+.+.
T Consensus 85 ~D~G~Y~C~~~~~ 97 (215)
T 3nl4_H 85 EDTATYFCVRKYG 97 (215)
T ss_dssp GGCEEEEEEEECS
T ss_pred ccCEEEEEEEecC
Confidence 9999999999987
No 314
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.36 E-value=8e-12 Score=92.96 Aligned_cols=94 Identities=15% Similarity=0.235 Sum_probs=71.0
Q ss_pred ccccCCC----eEEeCCceeEEecCCcEEEEEEEeecC---CC-eeEEEeCCEEec-cCcceEEE--Eec--ceEEEEEc
Q psy8425 5 LRATIHP----IEVSGLRNVSVKLRQSLRLVCRCKGNP---LP-AVSWFKDNVEIT-TNKRLKIQ--FKK--KRSTLIIT 71 (176)
Q Consensus 5 l~v~~~p----~~~~~~~~~~v~~G~~~~l~C~~~g~p---~p-~i~W~~~g~~l~-~~~~~~~~--~~~--~~~~L~i~ 71 (176)
|.|..+| .++ .+....+.+|+.+.|.|.+.|.| .| .+.|+++|..+. .+.+.... ... ....|.|.
T Consensus 220 l~V~~~~~~~~~~~-~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~ 298 (329)
T 3oq3_B 220 LTVIPSQDHRFKLI-LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFE 298 (329)
T ss_dssp EEEECCCCCCEEEE-CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEES
T ss_pred EEEECCCCCCCcee-cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEE
Confidence 5565555 334 66778899999999999999998 77 889999998753 32222111 111 45789999
Q ss_pred ccCCCCCE-EEEEEEEcC-CCceEEEEEEEEE
Q psy8425 72 RIRSEDAG-RYECRGTGV-HKDVVSAFAEVSI 101 (176)
Q Consensus 72 ~v~~~d~G-~Y~C~a~n~-g~~~~s~~~~l~V 101 (176)
++..+|+| .|+|.|.|. |....+ +.|.|
T Consensus 299 ~v~~~D~G~~Y~C~a~N~~G~~~~~--~~l~v 328 (329)
T 3oq3_B 299 NVTEEYIGNTYTCRGHNYYFDKTLT--TTVVL 328 (329)
T ss_dssp SCCGGGTTCEEEEEEECSSCEEEEE--EEEEE
T ss_pred eccHHHCCCcEEEEEEecCCceEEE--EEEEe
Confidence 99999999 999999999 777766 76665
No 315
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.36 E-value=1.9e-12 Score=94.29 Aligned_cols=100 Identities=16% Similarity=0.194 Sum_probs=72.8
Q ss_pred CccccC----CCeEEeCCceeEEecCCcEEEEEEEeecCCC-eeEEEeCCEEeccCcceEEEE--ecceEEEEEcccCCC
Q psy8425 4 GLRATI----HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLP-AVSWFKDNVEITTNKRLKIQF--KKKRSTLIITRIRSE 76 (176)
Q Consensus 4 ~l~v~~----~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p-~i~W~~~g~~l~~~~~~~~~~--~~~~~~L~i~~v~~~ 76 (176)
.|.|.. +|.+...+....+.+|+.+.|.|.+.+.|.+ .+.|++++..+.......... .....+|.|.++..+
T Consensus 176 ~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 255 (292)
T 4dkd_C 176 RLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQ 255 (292)
T ss_dssp EEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTT
T ss_pred EEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChh
Confidence 345554 8888877777777899999999999987754 688889888665433222111 023468999999999
Q ss_pred CCEEEEEEEEcC-CCceEEEEEEEEEecCC
Q psy8425 77 DAGRYECRGTGV-HKDVVSAFAEVSINLRP 105 (176)
Q Consensus 77 d~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p 105 (176)
|+|.|+|.|.|. |....+ +.|.|....
T Consensus 256 d~G~Y~C~a~N~~g~~~~~--~~l~V~~~~ 283 (292)
T 4dkd_C 256 HAGNYSCVASNVQGKHSTS--MFFRVVESA 283 (292)
T ss_dssp SCEEEEEEEECSSCEEEEE--EEECC----
T ss_pred cCeEEEEEEecCCCCceeE--EEEEEeeCC
Confidence 999999999999 777666 888887643
No 316
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.35 E-value=1.8e-11 Score=78.40 Aligned_cols=91 Identities=15% Similarity=0.256 Sum_probs=64.8
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--EE---ec---------cCcceEEEEecceEEEEEcccCCCCC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--VE---IT---------TNKRLKIQFKKKRSTLIITRIRSEDA 78 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~~---l~---------~~~~~~~~~~~~~~~L~i~~v~~~d~ 78 (176)
+...+..+.+.+|++++|.|.+.+.+.+.+.|+|.. .. +. ...|+.+.......+|.|.+++.+|+
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds 83 (120)
T 1mqk_L 4 LTQTPVSLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPEDF 83 (120)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred eEecCCeEEEcCCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEEEEECCCCHHHC
Confidence 455677788999999999999998888899999842 21 11 13455554445567899999999999
Q ss_pred EEEEEEEEcCC-CceEEEEEEEEEec
Q psy8425 79 GRYECRGTGVH-KDVVSAFAEVSINL 103 (176)
Q Consensus 79 G~Y~C~a~n~g-~~~~s~~~~l~V~~ 103 (176)
|.|.|.+.+.+ ......-..|.|..
T Consensus 84 G~Y~C~~~~~~~~~~fg~gt~L~V~~ 109 (120)
T 1mqk_L 84 GSYYCQHHYGTPPLTFGGGTKLEIKR 109 (120)
T ss_dssp EEEEEEECSSSSSCCBCCCEEEEEC-
T ss_pred EEEEEEEEeCCCceEECCCeEEEEec
Confidence 99999998853 21111125677754
No 317
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.35 E-value=6.8e-13 Score=103.07 Aligned_cols=90 Identities=21% Similarity=0.409 Sum_probs=68.6
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeC-CEEeccC---cceEEEEecceEEEEEcccCCCCCEEEEEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKD-NVEITTN---KRLKIQFKKKRSTLIITRIRSEDAGRYECRG 85 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~-g~~l~~~---~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 85 (176)
+|.+...+.+..+.+|++++|.|.+. |.|.+.|+++ +..+... .++.+ ..+++|.|.+++.+|+|.|+|.|
T Consensus 352 ~P~i~~~~~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~---~~~g~L~i~~v~~~D~G~Y~C~a 426 (452)
T 3zyi_A 352 APFIMDAPRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISV---LNDGTLNFSHVLLSDTGVYTCMV 426 (452)
T ss_dssp CCCCSBCCCCEECCTTSCCEECCBCC--TTSEEEEECTTSCEECSSCCCSSCEE---CTTSCEECSSCCTTCCEEEEEEE
T ss_pred CcccccccccccccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEE---CCCCeEEEeecCHHHCEEEEEEE
Confidence 57777778888999999999999988 9999999994 4444332 12222 34567999999999999999999
Q ss_pred EcC-CCceEEEEEEEEEecCCC
Q psy8425 86 TGV-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 86 ~n~-g~~~~s~~~~l~V~~~p~ 106 (176)
.|. |....+ +.|.|.+.+.
T Consensus 427 ~N~~G~~~~~--~~l~v~~~~~ 446 (452)
T 3zyi_A 427 TNVAGNSNAS--AYLNVSTAGT 446 (452)
T ss_dssp ECSSCEEEEE--EEEEC-----
T ss_pred EcCCCcEEEE--EEEEEEcccc
Confidence 999 877777 8888887554
No 318
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.34 E-value=8.5e-12 Score=87.85 Aligned_cols=87 Identities=22% Similarity=0.263 Sum_probs=59.7
Q ss_pred CceeEEecCCcEEEEEEEeecC--CCeeEEEeCC--EE---ec--------------cCcceEEEEe--cceEEEEEccc
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDN--VE---IT--------------TNKRLKIQFK--KKRSTLIITRI 73 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g--~~---l~--------------~~~~~~~~~~--~~~~~L~i~~v 73 (176)
+..+.+.+|++++|.|.+.+.+ .+.+.|+|.. .. +. ...|+.+... ....+|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (220)
T 2fbj_H 7 SGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKV 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCC
Confidence 4557899999999999998765 5789999842 11 10 1245555432 24568999999
Q ss_pred CCCCCEEEEEEEEcC-CCc-eEEEEEEEEEec
Q psy8425 74 RSEDAGRYECRGTGV-HKD-VVSAFAEVSINL 103 (176)
Q Consensus 74 ~~~d~G~Y~C~a~n~-g~~-~~s~~~~l~V~~ 103 (176)
+.+|+|.|.|.+.+. +.. .....+.|.|..
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~ 118 (220)
T 2fbj_H 87 RSEDTALYYCARLHYYGYNAYWGQGTLVTVSA 118 (220)
T ss_dssp CGGGCEEEEEEEEETTTEEEEECCCEEEEECS
T ss_pred ChhhCEEEEEEEeccccccceecCCEEEEecC
Confidence 999999999999987 321 111115666653
No 319
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.34 E-value=2.9e-12 Score=88.90 Aligned_cols=88 Identities=15% Similarity=0.195 Sum_probs=65.3
Q ss_pred EeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEE-ecceEEEEEcccCCCCCEEEEEEEEcC-CCc
Q psy8425 14 VSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQF-KKKRSTLIITRIRSEDAGRYECRGTGV-HKD 91 (176)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~ 91 (176)
........+..|+.+.+.|.+.|.|.|.+.|++++..+.......... ....+.|.|..+..+|.|.|+|.|.|. +..
T Consensus 122 ~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~ 201 (218)
T 4frw_A 122 LNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQ 201 (218)
T ss_dssp EEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSS
T ss_pred eeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCe
Confidence 334455667789999999999999999999999988776532221100 022457999999999999999999999 777
Q ss_pred eEEEEEEEEEec
Q psy8425 92 VVSAFAEVSINL 103 (176)
Q Consensus 92 ~~s~~~~l~V~~ 103 (176)
... +.+.|.+
T Consensus 202 ~~~--~t~~v~V 211 (218)
T 4frw_A 202 DQR--ITHILHV 211 (218)
T ss_dssp CEE--EEEECCE
T ss_pred EEE--EEEEEEE
Confidence 666 5555443
No 320
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.34 E-value=3.2e-12 Score=89.54 Aligned_cols=83 Identities=16% Similarity=0.237 Sum_probs=56.8
Q ss_pred EEecCCcEEEEEEEeecCCCeeEEEeC-CEEeccCcceEEEEecceE---EEEEcccCCCCCEEEEEEEEcC-CCceEEE
Q psy8425 21 SVKLRQSLRLVCRCKGNPLPAVSWFKD-NVEITTNKRLKIQFKKKRS---TLIITRIRSEDAGRYECRGTGV-HKDVVSA 95 (176)
Q Consensus 21 ~v~~G~~~~l~C~~~g~p~p~i~W~~~-g~~l~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~n~-g~~~~s~ 95 (176)
.+.+|+.+.|.|.+.|.|.|.+.|+++ +..+.......... ...+ ...+..+...|.|.|+|.|.|. +....+
T Consensus 127 ~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~- 204 (222)
T 3sbw_C 127 VDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSK-REEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHT- 204 (222)
T ss_dssp EETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEECC-----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEE-
T ss_pred eecCCCcEEEEEEecCCCCCeEEEEECCCceecCccceEEEc-CCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeE-
Confidence 567899999999999999999999998 66554422211111 1111 1222245578999999999999 877777
Q ss_pred EEEEEEecCCC
Q psy8425 96 FAEVSINLRPD 106 (176)
Q Consensus 96 ~~~l~V~~~p~ 106 (176)
+.|.|..+|.
T Consensus 205 -~~l~v~~~p~ 214 (222)
T 3sbw_C 205 -AELVIPELPL 214 (222)
T ss_dssp -EEEECCCC--
T ss_pred -EEEEecCCcc
Confidence 8888876554
No 321
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.34 E-value=1e-11 Score=89.19 Aligned_cols=92 Identities=17% Similarity=0.233 Sum_probs=67.0
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCC-CeeEEEeC--CEEec------------cCcceEEEEecceEEEEEcccC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPL-PAVSWFKD--NVEIT------------TNKRLKIQFKKKRSTLIITRIR 74 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~-p~i~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~i~~v~ 74 (176)
+|.+...+..+.+.+|++++|.|.+.+.+. +.+.|+|. +..+. ...++.+.......+|.|.+++
T Consensus 149 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 228 (256)
T 3juy_B 149 EIVLTQAPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVE 228 (256)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eeEEEecCCeEEEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCC
Confidence 456777788889999999999999998876 89999982 22211 2245555544566789999999
Q ss_pred CCCCEEEEEEEEcCCCceEEEEEEEEE
Q psy8425 75 SEDAGRYECRGTGVHKDVVSAFAEVSI 101 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~g~~~~s~~~~l~V 101 (176)
.+|+|.|.|.+.|.+.........|.|
T Consensus 229 ~~DsG~Y~C~~~~~~~~~~g~gt~l~V 255 (256)
T 3juy_B 229 PEDFALYYCQVYGASSYTFGQGTKLER 255 (256)
T ss_dssp GGGCSEEEEEECCSSCCEECCCEEEEE
T ss_pred HhHCEEEEEEEeeCCCceEcCCEEEEE
Confidence 999999999999863322222245554
No 322
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.34 E-value=7.8e-12 Score=86.30 Aligned_cols=77 Identities=13% Similarity=0.185 Sum_probs=58.1
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcce-EEEEecceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRL-KIQFKKKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
+|.+...+.. .+.+|++++|.|.+.+. .+.+.|+|+|..+...... ..........|.|.+++.+|+|.|+|.|.|.
T Consensus 100 ~p~~~~~~~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 177 (196)
T 3p2t_A 100 KPTLSALPSP-LVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHG 177 (196)
T ss_dssp CCEEEEESCS-EECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECG
T ss_pred CCEEEeCCcc-eecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcC
Confidence 4555544443 67899999999999874 4589999999877543221 1112245678999999999999999999998
No 323
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=99.33 E-value=2.2e-12 Score=80.79 Aligned_cols=90 Identities=17% Similarity=0.178 Sum_probs=63.5
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
.+|.+...+.. .+.+|++|+|.|.+.+. ...+.|+|+|..+... +.........|.|.+++.+|+|.|.|.+.|.
T Consensus 4 ~kP~i~~~p~~-~v~~G~~VtL~C~~~~~-~~~~~w~k~g~~~~~~---~~~~~~~~~~l~I~~v~~~dsG~Y~C~~~n~ 78 (105)
T 2vsd_A 4 PQPSLSLHPSQ-GVSLGDTVTLRCHLPRM-AAWVQLWLNGTLRFDK---EKDKEQDAAEFSFAVTNLEDAGTYQCRYQVS 78 (105)
T ss_dssp CCCEEEEESCS-SCCTTCEEEEEEECCSS-CEEEEEEETTEEEEEE---EECTTCSEEEEEEECCSGGGCEEEEEEEEEE
T ss_pred CCCEEEeCCCC-CcCcCCCEEEEEEcCCC-CcEEEEEECCccceee---eccCCCCEEEEEECCCCHHHCeEEEEEEEcC
Confidence 46777766655 68899999999998765 3578899999765421 1111145578999999999999999999985
Q ss_pred -C--CceEEEEEEEEEec
Q psy8425 89 -H--KDVVSAFAEVSINL 103 (176)
Q Consensus 89 -g--~~~~s~~~~l~V~~ 103 (176)
. ....+..+.|.|..
T Consensus 79 ~~~~~s~~Sdpl~L~V~~ 96 (105)
T 2vsd_A 79 EPLWTSNQSDPVELVLTI 96 (105)
T ss_dssp TTEEECCCCCCEEECCC-
T ss_pred CCCcccCCCCCEEEEEEE
Confidence 2 23334446666653
No 324
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.33 E-value=3.6e-12 Score=87.58 Aligned_cols=87 Identities=13% Similarity=0.189 Sum_probs=63.4
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcCC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGVH 89 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~g 89 (176)
+|.+...+ ...+.+|++++|.|.+.+ +.+.+.|+|+|..+.. ..........|.|.+++.+|+|.|+|.|.|..
T Consensus 99 ~p~i~~~p-~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~----~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 99 TPTLSVHP-GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHV----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp CCEEEEES-CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEE----EEEECSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred CCeEEECC-CCccccCCEEEEEEEcCC-CCCEEEEEECCccccc----cccCCCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 56665544 456889999999999875 4568999999876543 11222567899999999999999999999862
Q ss_pred --CceEEEEEEEEEe
Q psy8425 90 --KDVVSAFAEVSIN 102 (176)
Q Consensus 90 --~~~~s~~~~l~V~ 102 (176)
....+..+.|.|.
T Consensus 173 ~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 173 HAWSFPSEPVKLLVT 187 (188)
T ss_dssp TEECCCCCCEEEEEE
T ss_pred CcCCCCCCcEEEEec
Confidence 2233434666664
No 325
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=99.33 E-value=2.4e-11 Score=76.63 Aligned_cols=76 Identities=24% Similarity=0.448 Sum_probs=58.5
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeec--CCCeeEEEeC--CE----EeccCcceEEEEe--cceEEEEEcccCCCCCEEE
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGN--PLPAVSWFKD--NV----EITTNKRLKIQFK--KKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~--p~p~i~W~~~--g~----~l~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y 81 (176)
.+...+..+.+.+|++++|.|.+.+. +.+.+.|+|+ +. .+....++.+... ....+|.|.+++.+|+|.|
T Consensus 2 ~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y 81 (111)
T 2ywz_A 2 WVDQTPRTITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVDKGSKSFSLRISDLRVEDSGTY 81 (111)
T ss_dssp EEEEECSEEEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCSBTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred eeEECCCcEEEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEeeEeCCCEEEEEeCCCCEEEEEECCCChhcCEEE
Confidence 35566778899999999999999876 5678999984 22 2333456654432 3467899999999999999
Q ss_pred EEEEEc
Q psy8425 82 ECRGTG 87 (176)
Q Consensus 82 ~C~a~n 87 (176)
.|.+.+
T Consensus 82 ~C~~~~ 87 (111)
T 2ywz_A 82 KCQADY 87 (111)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 999998
No 326
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.33 E-value=2.3e-12 Score=99.51 Aligned_cols=82 Identities=17% Similarity=0.197 Sum_probs=59.1
Q ss_pred CCeE-EeCCceeE-EecCCcEEEEEEEeecC----CCeeEEEeCCEEeccCcceE-EEEe----cceEEEEEcccCCCCC
Q psy8425 10 HPIE-VSGLRNVS-VKLRQSLRLVCRCKGNP----LPAVSWFKDNVEITTNKRLK-IQFK----KKRSTLIITRIRSEDA 78 (176)
Q Consensus 10 ~p~~-~~~~~~~~-v~~G~~~~l~C~~~g~p----~p~i~W~~~g~~l~~~~~~~-~~~~----~~~~~L~i~~v~~~d~ 78 (176)
+|.+ +.++.... +.+|+.+.|.|.+.|.+ .+.+.|+|++..+....... .... ...++|.|.+++.+|+
T Consensus 238 ~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~ 317 (444)
T 1igt_B 238 GPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSG 317 (444)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTT
T ss_pred CceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccC
Confidence 5665 44443333 58899999999999984 35899999998875432111 1110 1346899999999999
Q ss_pred EEEEEEEEcC-CCc
Q psy8425 79 GRYECRGTGV-HKD 91 (176)
Q Consensus 79 G~Y~C~a~n~-g~~ 91 (176)
|.|+|.|.|. +..
T Consensus 318 G~Y~C~a~n~~~~~ 331 (444)
T 1igt_B 318 KEFKCKVNNKDLPA 331 (444)
T ss_dssp CEEEEEEECTTCSS
T ss_pred CcEEEEEEcCCCCC
Confidence 9999999998 655
No 327
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.33 E-value=2.3e-12 Score=91.23 Aligned_cols=72 Identities=25% Similarity=0.430 Sum_probs=54.6
Q ss_pred CceeEEecCCcEEEEEEEeecCC----CeeEEEeC--CEEec----------------cCcceEEEEe--cceEEEEEcc
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNPL----PAVSWFKD--NVEIT----------------TNKRLKIQFK--KKRSTLIITR 72 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p~----p~i~W~~~--g~~l~----------------~~~~~~~~~~--~~~~~L~i~~ 72 (176)
+..+.+.+|++++|.|.+.+.|. +.+.|+|+ +..+. ...|+.+... ....+|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 45678999999999999998774 88999984 22110 1245554432 2357899999
Q ss_pred cCCCCCEEEEEEEEcC
Q psy8425 73 IRSEDAGRYECRGTGV 88 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n~ 88 (176)
++.+|+|.|.|.+.+.
T Consensus 87 v~~~D~G~Y~C~~~~~ 102 (228)
T 3bae_H 87 VDTADTATYYCARRGF 102 (228)
T ss_dssp CCGGGCEEEEEEEEEE
T ss_pred CCcccCEEEEEEEecC
Confidence 9999999999999987
No 328
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.33 E-value=2.3e-12 Score=89.73 Aligned_cols=103 Identities=12% Similarity=0.141 Sum_probs=67.2
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEeecCC---CeeEEEeCCEEeccCcceEE----EEecceEEEEEcccCCC
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPL---PAVSWFKDNVEITTNKRLKI----QFKKKRSTLIITRIRSE 76 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~---p~i~W~~~g~~l~~~~~~~~----~~~~~~~~L~i~~v~~~ 76 (176)
.|.|..+|..........+.+|+.++|.|.+.+.++ +.+.|+|++..+........ ........|.|.....+
T Consensus 85 ~l~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d 164 (202)
T 1vca_A 85 QVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIED 164 (202)
T ss_dssp EEEEEBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGG
T ss_pred EEEEEeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeecc
Confidence 455665554221111256889999999999988643 36899999988754210000 00012356788888888
Q ss_pred CCEEEEEEEEcC-CCc-----eEEEEEEEEEecCCC
Q psy8425 77 DAGRYECRGTGV-HKD-----VVSAFAEVSINLRPD 106 (176)
Q Consensus 77 d~G~Y~C~a~n~-g~~-----~~s~~~~l~V~~~p~ 106 (176)
|.|.|+|.|.|. +.. ..+..+.|.|.++|.
T Consensus 165 ~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 165 IGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp TTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred CCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 899999999998 542 122238899999885
No 329
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.32 E-value=1.9e-12 Score=89.51 Aligned_cols=77 Identities=8% Similarity=-0.001 Sum_probs=47.3
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEE--ecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQF--KKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
+|.+...+ ...+.+|++++|.|.+.+.| +.+.|+|+|..+.......... ......|.|.+++.+|+|.|+|.|.|
T Consensus 100 ~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 177 (196)
T 2d3v_A 100 KPTLSALP-SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSR 177 (196)
T ss_dssp CCEEEC------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEE
T ss_pred CCeEEccC-CccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEc
Confidence 46665443 35788999999999999998 8999999998775421110010 01247899999999999999999999
Q ss_pred C
Q psy8425 88 V 88 (176)
Q Consensus 88 ~ 88 (176)
.
T Consensus 178 ~ 178 (196)
T 2d3v_A 178 R 178 (196)
T ss_dssp T
T ss_pred c
Confidence 7
No 330
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.32 E-value=6e-12 Score=80.44 Aligned_cols=90 Identities=12% Similarity=0.233 Sum_probs=62.4
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeecCCC----eeEEEeCC-------EEec------------c--CcceEEEEe---c
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGNPLP----AVSWFKDN-------VEIT------------T--NKRLKIQFK---K 63 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~p~p----~i~W~~~g-------~~l~------------~--~~~~~~~~~---~ 63 (176)
.+...+..+.+.+|++++|.|.+.+.+.+ .+.|++++ ..+. . ..+..+... .
T Consensus 7 ~v~~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 86 (126)
T 1eaj_A 7 SITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKS 86 (126)
T ss_dssp EESSSEEEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGG
T ss_pred EEECCCceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccC
Confidence 34445567789999999999999876653 49999854 2220 0 122222110 1
Q ss_pred ceEEEEEcccCCCCCEEEEEEEEcC-CCceEEEEEEEEEec
Q psy8425 64 KRSTLIITRIRSEDAGRYECRGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 64 ~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~ 103 (176)
...+|.|.+++.+|+|.|.|.+.+. +..... +.|.|.+
T Consensus 87 ~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~--~~L~V~~ 125 (126)
T 1eaj_A 87 GDASINVTNLQLSDIGTYQCKVKKAPGVANKK--IHLVVLV 125 (126)
T ss_dssp TBCCEEECSCCGGGCEEEEEEEEETTEEEEEE--EEEEEEC
T ss_pred CeEEEEECcCChHHCeEEEEEEEcCCccCCcE--EEEEEEc
Confidence 2367999999999999999999998 544545 7888865
No 331
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.32 E-value=5.4e-12 Score=79.37 Aligned_cols=87 Identities=17% Similarity=0.198 Sum_probs=60.9
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCC-----eeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEE
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLP-----AVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p-----~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 82 (176)
..+|.+...+.. .+.+|+.++|.|.+.+.+.. .+.|+|+|..+.. ......|.|.+++.+|+|.|.
T Consensus 6 ~~kP~l~~~p~~-~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~~--------~~~~~~l~i~~v~~~dsG~Y~ 76 (108)
T 4hwn_A 6 FPAPILRAVPSA-EPQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQS--------RGLSSEFQIPTASEDHSGSYW 76 (108)
T ss_dssp CCCCEEEEESCS-SCBTTCCEEEEEEC---------CCEEEEEETTEEEEE--------EESCCEEEESSCCGGGCEEEE
T ss_pred CCCCEEEecCCC-cCCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCccC--------CCcccEEEeCccCcccCeEEE
Confidence 456777665554 47899999999998765544 3899999987652 134568999999999999999
Q ss_pred EEEEcC-CC-ceEEEEEEEEEec
Q psy8425 83 CRGTGV-HK-DVVSAFAEVSINL 103 (176)
Q Consensus 83 C~a~n~-g~-~~~s~~~~l~V~~ 103 (176)
|.+.+. +. ...+..+.|.|..
T Consensus 77 C~~~~~~~~~~~~S~~l~L~V~g 99 (108)
T 4hwn_A 77 CEAATEDNQVWKQSPQLEIRVQG 99 (108)
T ss_dssp EEEECTTSSSEEECCCEEECCBC
T ss_pred EEEEeCCCceeccCCCEEEEEEe
Confidence 999987 42 2345446666654
No 332
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.32 E-value=4.5e-12 Score=89.35 Aligned_cols=89 Identities=15% Similarity=0.181 Sum_probs=66.0
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV- 88 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~- 88 (176)
+|.+...+ +..+.+|++++|.|.+.+.|.+.+.|+|+|..+... . ........|.|.+++.+|+|.|+|.|.|.
T Consensus 106 ~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~-~---~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 106 KPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ-H---QSGEHPANFSLGPVDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp CCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS-E---EECSSSEEEECCSCCGGGCEEEEEEEECTT
T ss_pred CCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc-c---cCCCccCEEEEccCCcccCEEEEEEEEcCC
Confidence 56665554 457899999999997777788899999999876542 1 12245689999999999999999999985
Q ss_pred CC---ceEEEEEEEEEec
Q psy8425 89 HK---DVVSAFAEVSINL 103 (176)
Q Consensus 89 g~---~~~s~~~~l~V~~ 103 (176)
.. ...+..+.|.|..
T Consensus 181 ~~~~~s~~S~~~~l~V~g 198 (218)
T 1uct_A 181 SPYLWSFPSNALELVVTD 198 (218)
T ss_dssp STTEECCCCCCEEEEEC-
T ss_pred CCCcCCCCCCcEEEEEec
Confidence 21 2233347777765
No 333
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=99.32 E-value=1.2e-11 Score=77.72 Aligned_cols=76 Identities=20% Similarity=0.329 Sum_probs=57.0
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC-----EEec---------cCcceEEEEecceEEEEEcccCCCCC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN-----VEIT---------TNKRLKIQFKKKRSTLIITRIRSEDA 78 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g-----~~l~---------~~~~~~~~~~~~~~~L~i~~v~~~d~ 78 (176)
+...+..+.+.+|++++|.|.+.+.+.+.+.|+|.. ..+. ...++.+.......+|.|.+++.+|+
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 83 (108)
T 1qfw_M 4 LTQSPKSMSMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSATDFTLTISSVQAEDF 83 (108)
T ss_dssp EEEECSCEECCTTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSSEEEEEESSCCTTCC
T ss_pred EEEeCCeEEEcCCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCCEEEEEECCCChhhC
Confidence 455677788999999999999988887889999843 1111 12344432223456899999999999
Q ss_pred EEEEEEEEcC
Q psy8425 79 GRYECRGTGV 88 (176)
Q Consensus 79 G~Y~C~a~n~ 88 (176)
|.|.|.+.+.
T Consensus 84 G~Y~C~~~~~ 93 (108)
T 1qfw_M 84 ADYHCGQTYN 93 (108)
T ss_dssp SEEEEEECSS
T ss_pred EEEEEEEccC
Confidence 9999999886
No 334
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=99.32 E-value=9.2e-11 Score=74.04 Aligned_cols=88 Identities=24% Similarity=0.292 Sum_probs=62.6
Q ss_pred CCceeEEecCCcEEEEEEEeecCCC-eeEEEeCCE-----Eec---------cCcceEEEEe--cceEEEEEcccCCCCC
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKGNPLP-AVSWFKDNV-----EIT---------TNKRLKIQFK--KKRSTLIITRIRSEDA 78 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g~p~p-~i~W~~~g~-----~l~---------~~~~~~~~~~--~~~~~L~i~~v~~~d~ 78 (176)
.+..+.+.+|++++|.|...+.... .+.|+|... .+. ...|+.+... ....+|.|.+++.+|+
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~Ds 86 (113)
T 1zox_A 7 GPEEVSGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSDA 86 (113)
T ss_dssp CCSEEEEETTSCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred CCCEEEEeCCCcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHHHC
Confidence 4556789999999999998765443 699999542 111 1234444432 3456899999999999
Q ss_pred EEEEEEEEcC-CCceEEEEEEEEEecCC
Q psy8425 79 GRYECRGTGV-HKDVVSAFAEVSINLRP 105 (176)
Q Consensus 79 G~Y~C~a~n~-g~~~~s~~~~l~V~~~p 105 (176)
|.|.|.+.+. ...... +.|.|..+|
T Consensus 87 G~Y~C~v~~~~~~~~~~--v~L~V~~~p 112 (113)
T 1zox_A 87 GIYWCGITKGGLDPMFK--VTVNIGPVP 112 (113)
T ss_dssp EEEEEEECCSSSCCEEE--EEEEEECC-
T ss_pred EEEEEeeEcCCCCccEE--EEEEEEcCC
Confidence 9999999988 344444 888887665
No 335
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=99.31 E-value=4.1e-11 Score=75.55 Aligned_cols=78 Identities=18% Similarity=0.322 Sum_probs=59.9
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC-----EEec---------cCcceEEEEecceEEEEEcccCCC
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN-----VEIT---------TNKRLKIQFKKKRSTLIITRIRSE 76 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g-----~~l~---------~~~~~~~~~~~~~~~L~i~~v~~~ 76 (176)
+.+...+..+.+.+|++++|.|.+.+.+.+.+.|++.. ..+. ...++.+.......+|.|.+++.+
T Consensus 5 ~~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 84 (111)
T 1i3g_L 5 IVLTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSE 84 (111)
T ss_dssp CCEEESCSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred ceEEEeCCEEEEcCCCCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCCEEEEEECCCCHH
Confidence 44566677889999999999999988777889999843 1111 124555544355678999999999
Q ss_pred CCEEEEEEEEcC
Q psy8425 77 DAGRYECRGTGV 88 (176)
Q Consensus 77 d~G~Y~C~a~n~ 88 (176)
|+|.|.|.+.+.
T Consensus 85 DsG~Y~C~~~~~ 96 (111)
T 1i3g_L 85 DLADYFCQQYSS 96 (111)
T ss_dssp GCSEEEEEECSS
T ss_pred HCEEEEEEEecC
Confidence 999999999876
No 336
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.31 E-value=1.3e-11 Score=90.64 Aligned_cols=73 Identities=16% Similarity=0.310 Sum_probs=54.6
Q ss_pred CCceeEEecCCcEEEEEEEeecC--CCeeEEEeCC--EEec-----------------cCcceEEEEe--cceEEEEEcc
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDN--VEIT-----------------TNKRLKIQFK--KKRSTLIITR 72 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g--~~l~-----------------~~~~~~~~~~--~~~~~L~i~~ 72 (176)
.+..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ..+. ...|+.+... ....+|.|.+
T Consensus 28 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 107 (291)
T 2gki_A 28 QSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSS 107 (291)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECS
T ss_pred cCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECc
Confidence 35578899999999999998876 5789999842 1110 1234444332 2357899999
Q ss_pred cCCCCCEEEEEEEEcC
Q psy8425 73 IRSEDAGRYECRGTGV 88 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n~ 88 (176)
++.+|+|.|.|.+.|.
T Consensus 108 v~~~DsG~Y~C~~~~~ 123 (291)
T 2gki_A 108 LTSEDSAVYYCARGAY 123 (291)
T ss_dssp CCGGGCEEEEEEEECG
T ss_pred CCHHHCEEEEEEEecc
Confidence 9999999999999987
No 337
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.30 E-value=2.6e-12 Score=90.55 Aligned_cols=92 Identities=15% Similarity=0.162 Sum_probs=58.5
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEee-cCCCeeEEEeCCEEeccCcceEEEEecc--eEEEEEcccCCCCCEEEEEEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKG-NPLPAVSWFKDNVEITTNKRLKIQFKKK--RSTLIITRIRSEDAGRYECRGT 86 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g-~p~p~i~W~~~g~~l~~~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~ 86 (176)
++.+........+.+|+.+.|.|.+.| .|.|.+.|++++..+.......+..... ...+.+..++.+|+|.|+|.|.
T Consensus 118 ~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~ 197 (226)
T 4f80_A 118 AALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIR 197 (226)
T ss_dssp EBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEE
T ss_pred ccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEE
Confidence 333334445567889999999999988 4999999999654433322222222111 1234455678899999999999
Q ss_pred cC-CCceEEEEEEEEEec
Q psy8425 87 GV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 87 n~-g~~~~s~~~~l~V~~ 103 (176)
|. +....+ +.|.|.+
T Consensus 198 N~~g~~~~~--~~v~v~e 213 (226)
T 4f80_A 198 SSLLGLEKT--ASISIAD 213 (226)
T ss_dssp ETTTTEEEE--EEECCCT
T ss_pred eCCCCeEEE--EEEEECC
Confidence 99 877777 7777754
No 338
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.30 E-value=1.8e-11 Score=88.62 Aligned_cols=77 Identities=18% Similarity=0.272 Sum_probs=55.8
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeC--CEEe------------ccC---c-ceEEEE-ecceEEEEEc
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKD--NVEI------------TTN---K-RLKIQF-KKKRSTLIIT 71 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~--g~~l------------~~~---~-~~~~~~-~~~~~~L~i~ 71 (176)
+.+...+..+.+.+|++++|.|.+.+ +.+.+.|+|. +... ... . ++.+.. .....+|.|.
T Consensus 28 ~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 106 (270)
T 3qib_D 28 MKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQ 106 (270)
T ss_dssp CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEES
T ss_pred eeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEEC
Confidence 45566677889999999999999865 7789999982 2111 000 0 433332 1346789999
Q ss_pred ccCCCCCEEEEEEEEcC
Q psy8425 72 RIRSEDAGRYECRGTGV 88 (176)
Q Consensus 72 ~v~~~d~G~Y~C~a~n~ 88 (176)
+++.+|+|.|.|.+.+.
T Consensus 107 ~v~~~D~G~Y~C~~~~~ 123 (270)
T 3qib_D 107 SSEAGDSALYLCASSLN 123 (270)
T ss_dssp SCCGGGCEEEEEEEESC
T ss_pred CCCHhHCeEEEEEEecC
Confidence 99999999999999974
No 339
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=99.30 E-value=3.2e-11 Score=77.81 Aligned_cols=95 Identities=16% Similarity=0.247 Sum_probs=66.4
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecC----CCeeEEEeCC--E---Eec---------cCcceEEEEecceEEEEEcc
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNP----LPAVSWFKDN--V---EIT---------TNKRLKIQFKKKRSTLIITR 72 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p----~p~i~W~~~g--~---~l~---------~~~~~~~~~~~~~~~L~i~~ 72 (176)
+.+...+..+.+.+|++++|.|.+.+.+ .+.+.|+|.. . .+. ...++.+.......+|.|.+
T Consensus 2 ~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~sL~I~~ 81 (126)
T 4ffy_L 2 IVLTQSPASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTIDS 81 (126)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESS
T ss_pred CcEEeCCCeEEEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCCCEEEEEECC
Confidence 3456667778999999999999998776 5679999842 1 111 12455555445677899999
Q ss_pred cCCCCCEEEEEEEEcCCCceEEEEEEEEEecCC
Q psy8425 73 IRSEDAGRYECRGTGVHKDVVSAFAEVSINLRP 105 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n~g~~~~s~~~~l~V~~~p 105 (176)
++.+|+|.|.|.+.+........-..|.|...+
T Consensus 82 v~~~DsG~Y~C~~~~~~~~~fg~gT~L~V~~~g 114 (126)
T 4ffy_L 82 VETDDAATYYCQQNNEDPYTFGGGTKLEIKGGG 114 (126)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEEC--
T ss_pred CCHHHCEEEEEEEecCCCcEECCCEEEEEecCC
Confidence 999999999999988632222222677777643
No 340
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.30 E-value=4.3e-12 Score=101.13 Aligned_cols=85 Identities=15% Similarity=0.373 Sum_probs=64.3
Q ss_pred CceeEEecCCcEEEEEEE-eecCCCeeEEEeCCEEecc------------CcceEEEEecceEEEEEcccCCCCCEEEEE
Q psy8425 17 LRNVSVKLRQSLRLVCRC-KGNPLPAVSWFKDNVEITT------------NKRLKIQFKKKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~-~g~p~p~i~W~~~g~~l~~------------~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 83 (176)
.+.+.+.+|++++|.|.+ .+.|.+.+.|+|++..+.. ..+..+ ..+++|.|.+++.+|+|.|+|
T Consensus 373 ~~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~---~~~~~L~i~~v~~~D~G~Y~C 449 (581)
T 3o3u_N 373 AQNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARV---LPNGSLFLPAVGIQDEGIFRC 449 (581)
T ss_dssp CEEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEE---CTTSCEEESSCCGGGCEEEEE
T ss_pred hcccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEE---cCCceEEEeccccccCeEEEE
Confidence 345678999999999998 7889999999998652211 122222 334589999999999999999
Q ss_pred EEEcC-CCc-eEEEEEEEEEecCCC
Q psy8425 84 RGTGV-HKD-VVSAFAEVSINLRPD 106 (176)
Q Consensus 84 ~a~n~-g~~-~~s~~~~l~V~~~p~ 106 (176)
.+.|. +.. ... +.|.|..+|.
T Consensus 450 ~~~n~~~~~~~~~--~~l~V~~~~~ 472 (581)
T 3o3u_N 450 QAMNRNGKETKSN--YRVRVYQIPG 472 (581)
T ss_dssp EEECTTSCEEEEE--EEEEEEBCCC
T ss_pred EEEcCCCceeEEE--EEEEEEcCCC
Confidence 99998 554 444 8888877544
No 341
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.29 E-value=1.1e-11 Score=88.83 Aligned_cols=95 Identities=16% Similarity=0.230 Sum_probs=68.6
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCC----eeEEEeC--CEEec------------cCcceEEEEecceEEEEEc
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLP----AVSWFKD--NVEIT------------TNKRLKIQFKKKRSTLIIT 71 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p----~i~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~i~ 71 (176)
+|.+...+..+.+.+|++++|.|.+.+.+.+ .+.|+|+ +..+. ...++.+.......+|.|.
T Consensus 133 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 212 (253)
T 3uzq_A 133 ELVMTQTPASLAVSLGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTIN 212 (253)
T ss_dssp -CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred cceEECcCCeEEEeCCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEEC
Confidence 5677777888899999999999999998876 8999984 22211 1234444444556789999
Q ss_pred ccCCCCCEEEEEEEEcCCCceEEEEEEEEEecC
Q psy8425 72 RIRSEDAGRYECRGTGVHKDVVSAFAEVSINLR 104 (176)
Q Consensus 72 ~v~~~d~G~Y~C~a~n~g~~~~s~~~~l~V~~~ 104 (176)
+++.+|+|.|.|.+.|.+......-..|.|...
T Consensus 213 ~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~~ 245 (253)
T 3uzq_A 213 PVEADDVATYFCQRSNEVPWTFGGGTKLEIKRP 245 (253)
T ss_dssp SCCGGGCEEEEEEECSSSSCCBCCCEEEEECCC
T ss_pred CCCHHHCEEEEEEEccCCCcEECCCEEEEEcCC
Confidence 999999999999999872222222267777754
No 342
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.29 E-value=4.3e-12 Score=91.37 Aligned_cols=92 Identities=15% Similarity=0.182 Sum_probs=65.9
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCCCeeEEEe--CCEEec------------cCcceEEEEecceEEEEEcccCCCCC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFK--DNVEIT------------TNKRLKIQFKKKRSTLIITRIRSEDA 78 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~--~g~~l~------------~~~~~~~~~~~~~~~L~i~~v~~~d~ 78 (176)
+...+..+.+.+|++++|.|.+.+.|.+.+.|+| +|..+. ...++.+.......+|.|.+++.+|+
T Consensus 142 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 221 (257)
T 1f3r_B 142 LTQSPSLLSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDV 221 (257)
T ss_dssp SCEETSEECCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGC
T ss_pred EEccCCEEEEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhC
Confidence 3444667778999999999999999889999999 554331 12455544334567899999999999
Q ss_pred EEEEEEEEcCCCceEEEEEEEEEecCC
Q psy8425 79 GRYECRGTGVHKDVVSAFAEVSINLRP 105 (176)
Q Consensus 79 G~Y~C~a~n~g~~~~s~~~~l~V~~~p 105 (176)
|.|.|.|.|.. ........|.|...+
T Consensus 222 G~Y~C~a~n~~-~~~g~gt~l~V~~~~ 247 (257)
T 1f3r_B 222 ATYFCYQYNNG-YTFGAGTKLELKAAE 247 (257)
T ss_dssp SEEEEEEESSS-EEECCCCEECCSSSC
T ss_pred EEEEEEEeCCC-CeECCCEEEEEeCCC
Confidence 99999999964 111111466665533
No 343
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.29 E-value=3.6e-11 Score=84.74 Aligned_cols=72 Identities=24% Similarity=0.360 Sum_probs=53.9
Q ss_pred CceeEEecCCcEEEEEEEeecC--CCeeEEEeCC--E---Eec--------------cCcceEEEEe--cceEEEEEccc
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDN--V---EIT--------------TNKRLKIQFK--KKRSTLIITRI 73 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g--~---~l~--------------~~~~~~~~~~--~~~~~L~i~~v 73 (176)
+..+.+.+|++++|.|.+.+.+ .+.+.|+|.. . .+. ...|+.+... ....+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (223)
T 1dee_B 7 SGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSL 86 (223)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCC
Confidence 3567899999999999998765 4789999842 1 110 1245555432 23578999999
Q ss_pred CCCCCEEEEEEEEcC
Q psy8425 74 RSEDAGRYECRGTGV 88 (176)
Q Consensus 74 ~~~d~G~Y~C~a~n~ 88 (176)
+.+|+|.|.|.+.+.
T Consensus 87 ~~~D~G~Y~C~~~~~ 101 (223)
T 1dee_B 87 RAEDTAVYYCAKVKF 101 (223)
T ss_dssp CGGGCEEEEEEEESS
T ss_pred CHHHCEEEEEEEecc
Confidence 999999999999986
No 344
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.29 E-value=3.1e-11 Score=88.07 Aligned_cols=92 Identities=15% Similarity=0.247 Sum_probs=67.4
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEe--CCEEec------------cCcceEEEEecceEEEEEcccCCC
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFK--DNVEIT------------TNKRLKIQFKKKRSTLIITRIRSE 76 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~--~g~~l~------------~~~~~~~~~~~~~~~L~i~~v~~~ 76 (176)
+.+...+..+.+.+|++++|.|.+.+.| +.+.|+| +|..+. ...++.+.......+|.|.+++.+
T Consensus 163 ~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 241 (282)
T 1qok_A 163 NVLTQSPAIMSASPGEKVTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAE 241 (282)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eEEecCCCEEEEcCCCcEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChh
Confidence 3456667778899999999999999999 8999999 555431 124555544456678999999999
Q ss_pred CCEEEEEEEEcCCCceEEEEEEEEEec
Q psy8425 77 DAGRYECRGTGVHKDVVSAFAEVSINL 103 (176)
Q Consensus 77 d~G~Y~C~a~n~g~~~~s~~~~l~V~~ 103 (176)
|+|.|.|.+.|.+.........|.|..
T Consensus 242 DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 242 DAATYYCQQRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred HCEEEEEEEeeCCCceEeCCEEEEEec
Confidence 999999999986322222226677754
No 345
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.29 E-value=1.4e-12 Score=90.98 Aligned_cols=75 Identities=16% Similarity=0.308 Sum_probs=56.2
Q ss_pred ecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcc-eEEEEecceEEEEEccc-CCCCCEEEEEEEEcC-CCceEEEEEEE
Q psy8425 23 KLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKR-LKIQFKKKRSTLIITRI-RSEDAGRYECRGTGV-HKDVVSAFAEV 99 (176)
Q Consensus 23 ~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~-~~~~~~~~~~~L~i~~v-~~~d~G~Y~C~a~n~-g~~~~s~~~~l 99 (176)
.+|++++|.|. +.|.|.+.|+|++..+....+ ..+. ..+++|.|.++ +.+|+|.|+|.|.|. |. ..+..+.|
T Consensus 126 ~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~--~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~-~~s~~l~l 200 (204)
T 1sy6_A 126 ISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIG--SDEDHLSLKEFSELEQSGYYVCYPRGSKPE-DANFYLYL 200 (204)
T ss_dssp EETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEE--EETTEEEETTCCHHHHCEEEEEEETTSCGG-GSSCEEEE
T ss_pred ecCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEe--cCCCEEEEeeCCccccCEEEEEEeccCCCC-ceeEEEEE
Confidence 38999999998 789999999999998865321 1121 13568999999 999999999999999 64 22322555
Q ss_pred EEe
Q psy8425 100 SIN 102 (176)
Q Consensus 100 ~V~ 102 (176)
.+.
T Consensus 201 ~~~ 203 (204)
T 1sy6_A 201 RAR 203 (204)
T ss_dssp EEC
T ss_pred EEe
Confidence 543
No 346
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.28 E-value=2.7e-12 Score=95.28 Aligned_cols=80 Identities=18% Similarity=0.241 Sum_probs=55.9
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeec-CCC---eeEEEeCC-EEeccCcceEEEEe----cceEEEEEcccCCCCCEEEE
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGN-PLP---AVSWFKDN-VEITTNKRLKIQFK----KKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~-p~p---~i~W~~~g-~~l~~~~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~ 82 (176)
.++..+....+.+|+.+.|.|.+.|. |.| .+.|+|++ ..+........... ...+.|.|.+++.+|+|.|+
T Consensus 115 v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~ 194 (323)
T 2wqr_A 115 AYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQ 194 (323)
T ss_dssp EEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEE
T ss_pred EEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEE
Confidence 44555655667889999999999886 556 89999964 44432111110000 13457999999999999999
Q ss_pred EEEEcC-CCc
Q psy8425 83 CRGTGV-HKD 91 (176)
Q Consensus 83 C~a~n~-g~~ 91 (176)
|.|.|. +..
T Consensus 195 C~a~n~~~~~ 204 (323)
T 2wqr_A 195 CRVTHPHLPR 204 (323)
T ss_dssp EEEECTTSSS
T ss_pred EEEECCCCCC
Confidence 999998 443
No 347
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=99.28 E-value=8e-11 Score=77.95 Aligned_cols=95 Identities=17% Similarity=0.214 Sum_probs=66.8
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC-----EEec---------cCcceEEEEecceEEEEEcccCC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN-----VEIT---------TNKRLKIQFKKKRSTLIITRIRS 75 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g-----~~l~---------~~~~~~~~~~~~~~~L~i~~v~~ 75 (176)
.+.+...+..+.+.+|++++|.|.+.+.+.+.+.|||.. ..+. ...|+.+.......+|.|.+++.
T Consensus 16 ~~~v~q~p~~v~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~v~~ 95 (146)
T 2yc1_B 16 EIVLTQSPATLSVSPGERATLSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSGTDFTLTISSLEP 95 (146)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred cceEEEeCCEEEEecCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCCCEEEEEECCCCH
Confidence 455667778889999999999999988777789999843 1121 12455554445567899999999
Q ss_pred CCCEEEEEEEEcCCCceEEEEEEEEEecC
Q psy8425 76 EDAGRYECRGTGVHKDVVSAFAEVSINLR 104 (176)
Q Consensus 76 ~d~G~Y~C~a~n~g~~~~s~~~~l~V~~~ 104 (176)
+|+|.|.|.+.+........-..|.|..+
T Consensus 96 ~DsG~Y~C~~~~~~~~~fg~GT~L~V~~~ 124 (146)
T 2yc1_B 96 EDFAIYYCQQYRYSPRTFGQGTKVEIKRA 124 (146)
T ss_dssp GGCSEEEEEECSSSSCEECCCEEEEEC--
T ss_pred HHCEEEEEEEecCCCCeECCCEEEEEeCC
Confidence 99999999998762222111256777653
No 348
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.28 E-value=2.6e-11 Score=87.08 Aligned_cols=94 Identities=14% Similarity=0.201 Sum_probs=67.8
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCC-eeEEEeC--CEEec------------cCcceEEEEecceEEEEEcccC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLP-AVSWFKD--NVEIT------------TNKRLKIQFKKKRSTLIITRIR 74 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p-~i~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~i~~v~ 74 (176)
+|.+...+..+.+.+|++++|.|.+.+.+.+ .+.|+|+ +..+. ...++.+.......+|.|.+++
T Consensus 141 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 220 (257)
T 3gkz_A 141 QIVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSME 220 (257)
T ss_dssp CCCEECSCSEEEECTTCCEEEEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred ceEEEcCCceEEEeCCCcEEEEEEEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCC
Confidence 3667777788899999999999999998887 8999983 32221 0144444443556789999999
Q ss_pred CCCCEEEEEEEEcCCCceEEEEEEEEEec
Q psy8425 75 SEDAGRYECRGTGVHKDVVSAFAEVSINL 103 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~g~~~~s~~~~l~V~~ 103 (176)
.+|+|.|.|.+.+.+......-..|.|..
T Consensus 221 ~~D~G~Y~C~~~~~~~~~fg~gt~l~v~~ 249 (257)
T 3gkz_A 221 AEDAASYFCHQWSSFPFTFGSGTKLEIKR 249 (257)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred hHHCEEEEEEEccCCceEEcCCEEEEEEe
Confidence 99999999999986322222225666664
No 349
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.27 E-value=3.6e-11 Score=93.24 Aligned_cols=73 Identities=16% Similarity=0.325 Sum_probs=54.9
Q ss_pred CCceeEEecCCcEEEEEEEeecC--CCeeEEEeC--CEE---ec--------------cCcceEEEEe--cceEEEEEcc
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKD--NVE---IT--------------TNKRLKIQFK--KKRSTLIITR 72 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~--g~~---l~--------------~~~~~~~~~~--~~~~~L~i~~ 72 (176)
.+..+.+.+|++++|.|.+.+.+ .+.+.|+|+ +.. +. ...|+.+... ....+|.|.+
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (457)
T 1hzh_H 6 QSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRS 85 (457)
T ss_dssp ECCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred cCCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECC
Confidence 34567899999999999998876 678999983 221 10 1245554432 3456899999
Q ss_pred cCCCCCEEEEEEEEcC
Q psy8425 73 IRSEDAGRYECRGTGV 88 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n~ 88 (176)
++.+|+|.|.|.+.|.
T Consensus 86 v~~~D~G~Y~C~~~~~ 101 (457)
T 1hzh_H 86 LRSADTAVYYCARVGP 101 (457)
T ss_dssp CCGGGCEEEEEEECCC
T ss_pred CCcccCEEEEEEEecC
Confidence 9999999999999987
No 350
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=99.27 E-value=9e-11 Score=74.15 Aligned_cols=75 Identities=28% Similarity=0.439 Sum_probs=55.8
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--EEe----------ccCcceEEEE---ecceEEEEEcccCCCC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--VEI----------TTNKRLKIQF---KKKRSTLIITRIRSED 77 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~~l----------~~~~~~~~~~---~~~~~~L~i~~v~~~d 77 (176)
+...+..+.+.+|++++|.|.+.+.+ +.+.|+|.. ..+ ....++.+.. .....+|.|.+++.+|
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D 82 (113)
T 1h5b_A 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLED 82 (113)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGG
T ss_pred eEECCCEEEEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhh
Confidence 45567778899999999999998755 689999843 111 1124444432 1345689999999999
Q ss_pred CEEEEEEEEcC
Q psy8425 78 AGRYECRGTGV 88 (176)
Q Consensus 78 ~G~Y~C~a~n~ 88 (176)
+|.|.|.+.|.
T Consensus 83 sG~Y~C~~~n~ 93 (113)
T 1h5b_A 83 SGTYFCAAEAS 93 (113)
T ss_dssp CEEEEEEEECS
T ss_pred CEEEEEEEecC
Confidence 99999999987
No 351
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.27 E-value=3.3e-11 Score=88.43 Aligned_cols=98 Identities=13% Similarity=0.272 Sum_probs=67.2
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCC------eeEEEeC--CEE---ec---------cCcceEEEEecceEEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLP------AVSWFKD--NVE---IT---------TNKRLKIQFKKKRSTLI 69 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p------~i~W~~~--g~~---l~---------~~~~~~~~~~~~~~~L~ 69 (176)
++.+...+..+.+.+|++++|.|.+.+.|.+ .+.|+|+ +.. +. ...++.+.......+|.
T Consensus 159 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~ 238 (291)
T 2gki_A 159 DLVMSQSPSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLT 238 (291)
T ss_dssp CCCEECSCSEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEE
T ss_pred cceEEcCCCEEEEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEE
Confidence 3445666777889999999999999888765 8999995 221 11 03455544444567899
Q ss_pred EcccCCCCCEEEEEEEEcCCCceEEEEEEEEEecCCCC
Q psy8425 70 ITRIRSEDAGRYECRGTGVHKDVVSAFAEVSINLRPDN 107 (176)
Q Consensus 70 i~~v~~~d~G~Y~C~a~n~g~~~~s~~~~l~V~~~p~~ 107 (176)
|.+++.+|+|.|.|.+.|.+......-..|.|...+..
T Consensus 239 I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~v~~~~~~ 276 (291)
T 2gki_A 239 ISSVQAEDLAVYYCKQSYYHMYTFGSGTKLEIKHHHHH 276 (291)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECC---
T ss_pred ECCCCHHHCEEEEEEEccCCceEEcCCEEEEEEeeEcC
Confidence 99999999999999999863222211256777765543
No 352
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=99.27 E-value=4.2e-11 Score=75.13 Aligned_cols=75 Identities=21% Similarity=0.445 Sum_probs=57.2
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecC--CCeeEEEeCC--E----EeccCcceEEEEe--cceEEEEEcccCCCCCEEEE
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDN--V----EITTNKRLKIQFK--KKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g--~----~l~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~ 82 (176)
+...+..+.+.+|++++|.|.+.+.+ .+.+.|+|+. . .+....++.+... ....+|.|.+++.+|+|.|.
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~ 82 (108)
T 2coq_A 3 VDQTPRIATKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTISIGGRYSETVDEGSNSASLTIRDLRVEDSGTYK 82 (108)
T ss_dssp EEEECSEEEECTTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred eEeCCceEEEcCCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEEEEeCCceEEEEcCCCCEEEEEECCCCcccCEEEE
Confidence 45567778899999999999997753 5689999852 2 2233456654432 34678999999999999999
Q ss_pred EEEEc
Q psy8425 83 CRGTG 87 (176)
Q Consensus 83 C~a~n 87 (176)
|.+.+
T Consensus 83 C~~~~ 87 (108)
T 2coq_A 83 CKAYR 87 (108)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99987
No 353
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=99.27 E-value=2.6e-11 Score=76.39 Aligned_cols=76 Identities=20% Similarity=0.368 Sum_probs=57.4
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecC----CCeeEEEeCC--E--E-ec---------cCcceEEEEecceEEEEEcccC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNP----LPAVSWFKDN--V--E-IT---------TNKRLKIQFKKKRSTLIITRIR 74 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p----~p~i~W~~~g--~--~-l~---------~~~~~~~~~~~~~~~L~i~~v~ 74 (176)
+...+..+.+.+|++++|.|.+.+.+ .+.+.|+|.. . . +. ...|+.+.......+|.|.+++
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~ 83 (111)
T 1j05_L 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVE 83 (111)
T ss_dssp EEEECSEEECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCC
T ss_pred EEEeCCEEEEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccCCEEEEEECCCC
Confidence 45556778899999999999998776 4679999842 2 1 11 1245555444556789999999
Q ss_pred CCCCEEEEEEEEcC
Q psy8425 75 SEDAGRYECRGTGV 88 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~ 88 (176)
.+|+|.|.|.+.+.
T Consensus 84 ~~DsG~Y~C~~~~~ 97 (111)
T 1j05_L 84 ADDVATYYCQQTNE 97 (111)
T ss_dssp GGGCEEEEEEECSS
T ss_pred cccCEEEEEEEecC
Confidence 99999999999875
No 354
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.26 E-value=2.1e-11 Score=77.00 Aligned_cols=80 Identities=19% Similarity=0.194 Sum_probs=56.8
Q ss_pred eEEecCCcEEEEEEEeecCCCeeEEEeCCEEec-------------------cCcceEEEEecceEEEEEcccCCCCCEE
Q psy8425 20 VSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEIT-------------------TNKRLKIQFKKKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 20 ~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~-------------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 80 (176)
..+.+|+++.|.|.....+.+.+.|+|+..... -..|..+ ..+++|.|.+++.+|+|.
T Consensus 10 ~~~~~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~---~~ngSL~I~nvt~~D~G~ 86 (111)
T 2qsq_A 10 FNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREII---YPNASLLIQNIIQNDAGF 86 (111)
T ss_dssp SEEETTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEE---CTTSCEEECSCCGGGCEE
T ss_pred ceeccCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEE---ecCCcEEEccCcccCCeE
Confidence 468899999999985333344799999653211 0123332 456799999999999999
Q ss_pred EEEEEEcC-CC-ceEEEEEEEEEecC
Q psy8425 81 YECRGTGV-HK-DVVSAFAEVSINLR 104 (176)
Q Consensus 81 Y~C~a~n~-g~-~~~s~~~~l~V~~~ 104 (176)
|+|.+.+. +. .... +.|.|..+
T Consensus 87 Ytc~v~~~~~~~~~~~--~~L~V~~~ 110 (111)
T 2qsq_A 87 YTLHVIKSDLVNEEAT--GQFRVYPE 110 (111)
T ss_dssp EEEEEEETTSCCEEEE--EEEEEECC
T ss_pred EEEEEEeCCCcEEEEE--EEEEEecC
Confidence 99999998 53 3444 78887653
No 355
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.26 E-value=1.3e-11 Score=86.82 Aligned_cols=84 Identities=15% Similarity=0.309 Sum_probs=61.5
Q ss_pred ccccCC---CeEEeCCceeEEecCCcE-EEEEEE-eecCCCeeEEEeCCEEeccCc----ceEEEEe----cc-----eE
Q psy8425 5 LRATIH---PIEVSGLRNVSVKLRQSL-RLVCRC-KGNPLPAVSWFKDNVEITTNK----RLKIQFK----KK-----RS 66 (176)
Q Consensus 5 l~v~~~---p~~~~~~~~~~v~~G~~~-~l~C~~-~g~p~p~i~W~~~g~~l~~~~----~~~~~~~----~~-----~~ 66 (176)
|.|..+ |.+...+....+.+|+.+ .|.|.+ .+.|.|.+.|+++|..+.... ++.+... .. .+
T Consensus 110 l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 189 (231)
T 2pet_A 110 LNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTS 189 (231)
T ss_dssp EEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEE
T ss_pred EEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCccccccccceeecceeEecCCCeEEEEE
Confidence 455544 455556666677789988 999999 899999999999999987654 3333221 01 16
Q ss_pred EEEEcccCCCCCEEEEEEEEcC
Q psy8425 67 TLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 67 ~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
.|.|.....+|.|.|+|.|.|.
T Consensus 190 ~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 190 TLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp EEEEECCGGGGGCEEEEEEEEE
T ss_pred EEEEecchhhCCceEEEEEEcC
Confidence 6888766666799999999993
No 356
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.26 E-value=1.8e-11 Score=94.52 Aligned_cols=87 Identities=22% Similarity=0.290 Sum_probs=60.3
Q ss_pred CCceeEEecCCcEEEEEEEeecC--CCeeEEEeC--CEEec-----------------cCcceEEEEe--cceEEEEEcc
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKD--NVEIT-----------------TNKRLKIQFK--KKRSTLIITR 72 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i~~ 72 (176)
.+..+.+.+|+++.|.|.+.+.+ .+.+.|+|+ +..+. ...|+.+... ....+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (444)
T 1igt_B 6 ESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSR 85 (444)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECS
T ss_pred cCCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECC
Confidence 34567899999999999998764 568999984 32211 1235554432 2457899999
Q ss_pred cCCCCCEEEEEEEEcC-CCc-eEEEEEEEEEe
Q psy8425 73 IRSEDAGRYECRGTGV-HKD-VVSAFAEVSIN 102 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n~-g~~-~~s~~~~l~V~ 102 (176)
++.+|+|.|.|.+.|. +.. .....+.|.|.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~ 117 (444)
T 1igt_B 86 LKSEDTAMYYCARHGGYYAMDYWGQGTTVTVS 117 (444)
T ss_dssp CCGGGCEEEEEEEECSSSCEEEEBCCEEEEEC
T ss_pred CCHHHCEEEEEEEecCCcccccccCcEEEEec
Confidence 9999999999999997 431 11111566665
No 357
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.25 E-value=1.9e-11 Score=86.70 Aligned_cols=77 Identities=17% Similarity=0.328 Sum_probs=59.0
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--E---Ee---------ccCcceEEEEe--cceEEEEEcccCC
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--V---EI---------TTNKRLKIQFK--KKRSTLIITRIRS 75 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~---~l---------~~~~~~~~~~~--~~~~~L~i~~v~~ 75 (176)
.+...+..+.+.+|++++|.|.+.+.|.|.+.|+|++ . .+ ....++.+... ....+|.|.+++.
T Consensus 129 ~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 208 (238)
T 2p1y_A 129 QVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQP 208 (238)
T ss_dssp CCEEECSEEEEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCG
T ss_pred eEEccCceEEEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCH
Confidence 4555677788999999999999999999999999963 1 11 11234444321 2357899999999
Q ss_pred CCCEEEEEEEEcC
Q psy8425 76 EDAGRYECRGTGV 88 (176)
Q Consensus 76 ~d~G~Y~C~a~n~ 88 (176)
+|+|.|.|.|.|.
T Consensus 209 ~D~G~Y~C~a~n~ 221 (238)
T 2p1y_A 209 GDSATYFCAAIDT 221 (238)
T ss_dssp GGCEEEEEEEEET
T ss_pred HHCEEEEEEEeeC
Confidence 9999999999997
No 358
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.25 E-value=1e-10 Score=72.16 Aligned_cols=85 Identities=20% Similarity=0.284 Sum_probs=58.4
Q ss_pred CceeEEecCCcEEEEEEEee-cCCCeeEEEeCC----EEeccCcceEEEEe----cceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 17 LRNVSVKLRQSLRLVCRCKG-NPLPAVSWFKDN----VEITTNKRLKIQFK----KKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g-~p~p~i~W~~~g----~~l~~~~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
.....+..|+.+.|.|.+.+ .|.|.++|.|.+ .++........... .....|.|.++...|+|.|+|.|.+
T Consensus 21 ~S~~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn~ 100 (122)
T 1xau_A 21 NSKHSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNF 100 (122)
T ss_dssp TEEEEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEEE
T ss_pred eccEEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEEcCCccEEEEeeC
Confidence 34457889999999999966 689999999954 33322111111111 1345899999999999999999999
Q ss_pred C-CC-ceEEEEEEEEEec
Q psy8425 88 V-HK-DVVSAFAEVSINL 103 (176)
Q Consensus 88 ~-g~-~~~s~~~~l~V~~ 103 (176)
. |. ..++ ..|.|.+
T Consensus 101 ~~g~ieSHs--~ti~V~~ 116 (122)
T 1xau_A 101 NSQVINSHS--VTIHVRE 116 (122)
T ss_dssp TTEEEECCC--EEEEEC-
T ss_pred CCCceeeeE--EEEEEEe
Confidence 7 32 3334 6666654
No 359
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.25 E-value=3.3e-11 Score=84.43 Aligned_cols=84 Identities=24% Similarity=0.342 Sum_probs=59.2
Q ss_pred CceeEEecCCcEEEEEEEeecC--CCeeEEEeCC--EEec----------------cCcceEEEEe--cceEEEEEcccC
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDN--VEIT----------------TNKRLKIQFK--KKRSTLIITRIR 74 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g--~~l~----------------~~~~~~~~~~--~~~~~L~i~~v~ 74 (176)
+..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ..+. ...|+.+... ....+|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ 86 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC
Confidence 4567899999999999998765 4789999852 2110 1245554432 235689999999
Q ss_pred CCCCEEEEEEEEcC-CC---ceEEEEEEEEEe
Q psy8425 75 SEDAGRYECRGTGV-HK---DVVSAFAEVSIN 102 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~-g~---~~~s~~~~l~V~ 102 (176)
.+|+|.|.|.+.+. +. .... +.|.|.
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~--~~L~V~ 116 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFDYWGPG--TMVTVS 116 (215)
T ss_dssp GGGCEEEEEEECCSSSCSCCBCCC--EEEEEC
T ss_pred cccCEEEEEEEecCCcccceEcCC--EEEEec
Confidence 99999999999986 22 1122 567776
No 360
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.25 E-value=1.4e-11 Score=91.38 Aligned_cols=85 Identities=13% Similarity=0.209 Sum_probs=54.8
Q ss_pred cccCCCeEEeCCceeEEecCCcEEEEEEEeecCC-C-eeEEEeCCEEeccCcceEEEEecc-----eEEEEEcccCCCCC
Q psy8425 6 RATIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPL-P-AVSWFKDNVEITTNKRLKIQFKKK-----RSTLIITRIRSEDA 78 (176)
Q Consensus 6 ~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~-p-~i~W~~~g~~l~~~~~~~~~~~~~-----~~~L~i~~v~~~d~ 78 (176)
.+..+|.+...+.. +.+|+.+.|.|.+.|.|+ + .+.|++||..+.......+..... ...|.|..+..+|+
T Consensus 218 ~v~~~P~i~~~~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~ 295 (327)
T 2wng_A 218 TIRVPPTLEVTQQP--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDD 295 (327)
T ss_dssp TBCBCCEEEEEEEC--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------C
T ss_pred ccCCCCEEEEecCC--cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCC
Confidence 45667877655444 779999999999999544 4 799999999886532211111111 25688999999999
Q ss_pred EEEEEEEEcC-CCce
Q psy8425 79 GRYECRGTGV-HKDV 92 (176)
Q Consensus 79 G~Y~C~a~n~-g~~~ 92 (176)
|.|+|.|.|. +...
T Consensus 296 G~Y~C~a~N~~~~~~ 310 (327)
T 2wng_A 296 VKLTCQVEHDGQPAV 310 (327)
T ss_dssp CEEEEEEEETTCCCE
T ss_pred CEEEEEEEeCCCCCc
Confidence 9999999999 5443
No 361
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.24 E-value=9e-12 Score=89.05 Aligned_cols=80 Identities=15% Similarity=0.196 Sum_probs=56.3
Q ss_pred eEEeCCceeE-EecCCcEEEEEEEeec---CCC-eeEEEeCCEEeccCcce-EEEEe----cceEEEEEcccCCCCCEEE
Q psy8425 12 IEVSGLRNVS-VKLRQSLRLVCRCKGN---PLP-AVSWFKDNVEITTNKRL-KIQFK----KKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 12 ~~~~~~~~~~-v~~G~~~~l~C~~~g~---p~p-~i~W~~~g~~l~~~~~~-~~~~~----~~~~~L~i~~v~~~d~G~Y 81 (176)
.++.++.... +.+|++++|.|.+.+. |.+ .+.|+|++..+...... ..... .....|.|.+++.+|+|.|
T Consensus 18 v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y 97 (239)
T 1i1c_A 18 VFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTF 97 (239)
T ss_dssp EEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCE
T ss_pred EEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeE
Confidence 3444444333 6799999999999987 777 89999988665431100 00000 1335799999999999999
Q ss_pred EEEEEcC-CCc
Q psy8425 82 ECRGTGV-HKD 91 (176)
Q Consensus 82 ~C~a~n~-g~~ 91 (176)
.|.+.|. +..
T Consensus 98 ~C~~~~~~~~~ 108 (239)
T 1i1c_A 98 KCKVNSGAFPA 108 (239)
T ss_dssp EEEEECSSSSS
T ss_pred EEEEecccCCC
Confidence 9999998 543
No 362
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=99.24 E-value=1.5e-10 Score=73.23 Aligned_cols=76 Identities=17% Similarity=0.306 Sum_probs=57.4
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCC------CeeEEEeCC--E---Eec---------cCcceEEEEecceEEEEEcc
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPL------PAVSWFKDN--V---EIT---------TNKRLKIQFKKKRSTLIITR 72 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~------p~i~W~~~g--~---~l~---------~~~~~~~~~~~~~~~L~i~~ 72 (176)
+...+..+.+.+|++++|.|.+.+.+. +.+.|+|.. . .+. ...++.+.......+|.|.+
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 83 (114)
T 1eeq_A 4 LTQSPDSLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISS 83 (114)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred eEecCCeEEEcCCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecCCEEEEEECC
Confidence 455577789999999999999987763 679999842 1 111 12455554445567899999
Q ss_pred cCCCCCEEEEEEEEcC
Q psy8425 73 IRSEDAGRYECRGTGV 88 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n~ 88 (176)
++.+|+|.|.|.+.+.
T Consensus 84 v~~~DsG~Y~C~~~~~ 99 (114)
T 1eeq_A 84 LQAEDVAVYYCQQYYS 99 (114)
T ss_dssp CCGGGCEEEEEEECSS
T ss_pred CCcccCEEEEEEEeeC
Confidence 9999999999999876
No 363
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=99.24 E-value=1.7e-11 Score=77.72 Aligned_cols=87 Identities=15% Similarity=0.229 Sum_probs=57.3
Q ss_pred CCceeEEecCCcEEEEEEEee-cCCCeeEEEeCCEE--------e---------ccCcceEEEE--ecceEEEEEcccCC
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKG-NPLPAVSWFKDNVE--------I---------TTNKRLKIQF--KKKRSTLIITRIRS 75 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g-~p~p~i~W~~~g~~--------l---------~~~~~~~~~~--~~~~~~L~i~~v~~ 75 (176)
++..+.+.+|++++|.|...+ ...+.+.|+|.... + ....++.+.. .....+|.|.+++.
T Consensus 3 ~~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~ 82 (116)
T 2or8_A 3 SYVEVKGVVGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVE 82 (116)
T ss_dssp CCEEEEEETTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCG
T ss_pred CcceEEEEeCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCc
Confidence 355678999999999999865 34567999996511 1 0112332211 12346899999999
Q ss_pred CCCEEEEEEEEcC-CCceEEEEEEEEEe
Q psy8425 76 EDAGRYECRGTGV-HKDVVSAFAEVSIN 102 (176)
Q Consensus 76 ~d~G~Y~C~a~n~-g~~~~s~~~~l~V~ 102 (176)
+|+|.|.|.+.+. +.......+.|.|.
T Consensus 83 ~DsG~Y~C~v~~~~~~~~~~~~~~l~V~ 110 (116)
T 2or8_A 83 SDSGLYCCRVEIPGWFNDQKVTFSLQVK 110 (116)
T ss_dssp GGCEEEEEEECCSSTTCCEEEEEEEEEE
T ss_pred ccCEEEEEEEEcCCcccccEEEEEEEEC
Confidence 9999999999987 34333411444443
No 364
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=99.24 E-value=1.8e-10 Score=74.35 Aligned_cols=77 Identities=23% Similarity=0.406 Sum_probs=59.3
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeec--CCCeeEEEeC--CE----EeccCcceEEEEe--cceEEEEEcccCCCCCEEE
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGN--PLPAVSWFKD--NV----EITTNKRLKIQFK--KKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~--p~p~i~W~~~--g~----~l~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y 81 (176)
.+.+.+..+.+.+|++++|.|...+. +.+.+.|+|. +. .+....++.+... ....+|.|.+++.+|+|.|
T Consensus 2 ~V~Q~p~~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y 81 (126)
T 3moq_A 2 WVDQTPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVNKGSKSFSLRISDLRVEDSGTY 81 (126)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred ceEECCceEEEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceEEEEeCCcEEEEEeCCCCEEEEEECcCChHhCEEE
Confidence 45667788899999999999999875 4568999983 32 2233455555433 3567899999999999999
Q ss_pred EEEEEcC
Q psy8425 82 ECRGTGV 88 (176)
Q Consensus 82 ~C~a~n~ 88 (176)
.|.+.+.
T Consensus 82 ~C~~~~~ 88 (126)
T 3moq_A 82 KCQAFYV 88 (126)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 9999886
No 365
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.24 E-value=2.3e-11 Score=99.66 Aligned_cols=96 Identities=19% Similarity=0.244 Sum_probs=73.5
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeE-EE--eCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEE
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVS-WF--KDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECR 84 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~-W~--~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 84 (176)
..+|.|. .+.++.+.+|+++.|.|.+.|.|.|.+. |+ ++|..+.......+......++|.|.++...|+|.|+|.
T Consensus 163 ~~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~ 241 (731)
T 2v5y_A 163 TRTPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCM 241 (731)
T ss_dssp SSSCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEE
T ss_pred ccccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEE
Confidence 3578877 5567899999999999999999999988 88 688776543211111112247899999999999999999
Q ss_pred EEcC-CC-ceEEEEEEEEEecCCC
Q psy8425 85 GTGV-HK-DVVSAFAEVSINLRPD 106 (176)
Q Consensus 85 a~n~-g~-~~~s~~~~l~V~~~p~ 106 (176)
|.|. |. .... +.|.|..+|.
T Consensus 242 A~n~~G~~~s~~--~~l~V~~~P~ 263 (731)
T 2v5y_A 242 IRTEGGVGISNY--AELVVKEPPV 263 (731)
T ss_dssp EEETTEEEECCC--EEEEEECCCC
T ss_pred EECCCCCcceee--EEEEEecCCC
Confidence 9999 65 4444 7888888766
No 366
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.23 E-value=1.9e-11 Score=90.67 Aligned_cols=63 Identities=17% Similarity=0.369 Sum_probs=46.6
Q ss_pred CcEEEEEEEeec-C-CCeeEEEeCCEEeccCcceE-EEEec----ceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 26 QSLRLVCRCKGN-P-LPAVSWFKDNVEITTNKRLK-IQFKK----KRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 26 ~~~~l~C~~~g~-p-~p~i~W~~~g~~l~~~~~~~-~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
+.+.|.|.+.|. | .+.+.|+|+|..+....... ..... ..+.|.|..+..+|+|.|+|.|.|.
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~ 94 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQ 94 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEET
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeC
Confidence 699999999986 4 46899999999887543211 11111 1246788888888999999999998
No 367
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.23 E-value=1e-10 Score=85.25 Aligned_cols=75 Identities=20% Similarity=0.310 Sum_probs=54.7
Q ss_pred EEeCCceeEEecCCcEEEEEEEeec--CCCeeEEEeCC--EEec-----------------cCcceEEEEe--cceEEEE
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGN--PLPAVSWFKDN--VEIT-----------------TNKRLKIQFK--KKRSTLI 69 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~--p~p~i~W~~~g--~~l~-----------------~~~~~~~~~~--~~~~~L~ 69 (176)
+.. +..+.+.+|++++|.|.+.+. +.+.+.|+|.. ..+. ...++.+... ....+|.
T Consensus 4 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (280)
T 3fku_X 4 LVQ-SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMD 82 (280)
T ss_dssp EEC-CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEE
T ss_pred EEc-CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEE
Confidence 444 677889999999999999875 55789999732 1110 1134544422 3346899
Q ss_pred EcccCCCCCEEEEEEEEcC
Q psy8425 70 ITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 70 i~~v~~~d~G~Y~C~a~n~ 88 (176)
|.+++.+|+|.|.|.+.+.
T Consensus 83 I~~v~~~DsG~Y~C~~~~~ 101 (280)
T 3fku_X 83 LRSLRSEDTAVYYCARSPS 101 (280)
T ss_dssp ECSCCSTTCEECCEEECSS
T ss_pred ECCCChhhCEEEEEEEecC
Confidence 9999999999999999885
No 368
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=99.22 E-value=6.2e-11 Score=75.83 Aligned_cols=91 Identities=13% Similarity=0.140 Sum_probs=58.6
Q ss_pred eCCceeEEecCCcEEEEEEEeec----CCCeeEEEeCCE----E--ec-c-------------CcceEEEEe--cceEEE
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGN----PLPAVSWFKDNV----E--IT-T-------------NKRLKIQFK--KKRSTL 68 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~----p~p~i~W~~~g~----~--l~-~-------------~~~~~~~~~--~~~~~L 68 (176)
..+..+.+.+|++++|.|..... +.+.+.|++++. . +. . ..|+.+... ..+.+|
T Consensus 4 ~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 83 (124)
T 1neu_A 4 YTDREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSI 83 (124)
T ss_dssp ECCSEEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCE
T ss_pred ecCCeEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEE
Confidence 44567789999999999998643 456899998432 0 10 0 122222110 234689
Q ss_pred EEcccCCCCCEEEEEEEEcC-CCceEEEEEEEEEecCC
Q psy8425 69 IITRIRSEDAGRYECRGTGV-HKDVVSAFAEVSINLRP 105 (176)
Q Consensus 69 ~i~~v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p 105 (176)
.|.+++.+|+|.|.|.+.+. +.......+.|.|..+|
T Consensus 84 ~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~p 121 (124)
T 1neu_A 84 VIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKV 121 (124)
T ss_dssp EECSCCGGGCEEEEEEEEC----CCEEEEEEEEEEC--
T ss_pred EEccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEecCC
Confidence 99999999999999999998 54222222888888755
No 369
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.22 E-value=2e-11 Score=84.38 Aligned_cols=79 Identities=20% Similarity=0.289 Sum_probs=57.8
Q ss_pred EEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CCceEEEEEEE
Q psy8425 21 SVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HKDVVSAFAEV 99 (176)
Q Consensus 21 ~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~s~~~~l 99 (176)
.+.+|+.+.|.|.+.|.|.|.+.|++++..+... ...........+.|.++..+|.|.|+|.|.|. |....+ +.|
T Consensus 114 ~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~--~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~--~~l 189 (202)
T 3bp6_B 114 EVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTS--HIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTS--AII 189 (202)
T ss_dssp ECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEE--EEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEE--EEE
T ss_pred ecCCCCeEEEEEEccccCCceEEEEeCCCCccCc--eeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccE--EEE
Confidence 4568999999999999999999999988654321 11100022255678889999999999999999 777666 666
Q ss_pred EEec
Q psy8425 100 SINL 103 (176)
Q Consensus 100 ~V~~ 103 (176)
.|..
T Consensus 190 ~v~~ 193 (202)
T 3bp6_B 190 DPLS 193 (202)
T ss_dssp CC--
T ss_pred EecC
Confidence 6654
No 370
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.21 E-value=3.2e-11 Score=77.80 Aligned_cols=85 Identities=16% Similarity=0.226 Sum_probs=57.0
Q ss_pred CCceeEEecCCcEEEEEEEeecCC---CeeEEEeCCEE-----------ecc------CcceEEEEe---cceEEEEEcc
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKGNPL---PAVSWFKDNVE-----------ITT------NKRLKIQFK---KKRSTLIITR 72 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g~p~---p~i~W~~~g~~-----------l~~------~~~~~~~~~---~~~~~L~i~~ 72 (176)
++..+....|++++|.|.....+. ..+.|+|++.. ... ..|..+... ..+.+|.|.+
T Consensus 11 ~~~~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~ 90 (125)
T 4gos_A 11 TTVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKN 90 (125)
T ss_dssp EEECEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESS
T ss_pred cCceEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECC
Confidence 344567888999999999864433 26899986421 110 112211110 2246899999
Q ss_pred cCCCCCEEEEEEEEcC-CCceEEEEEEEEEe
Q psy8425 73 IRSEDAGRYECRGTGV-HKDVVSAFAEVSIN 102 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~ 102 (176)
++.+|+|.|.|.+.|. +..... +.|.|-
T Consensus 91 v~~~D~G~Y~C~v~~~~g~~~~~--v~LkVG 119 (125)
T 4gos_A 91 VQLTDAGTYKCYIITSKGKGNAN--LEYKTG 119 (125)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEE--EEEEEE
T ss_pred CChHHCEEEEEEEEeCCCeEEEE--EEEEEC
Confidence 9999999999999998 666655 666663
No 371
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.21 E-value=4.5e-11 Score=85.59 Aligned_cols=90 Identities=12% Similarity=0.154 Sum_probs=65.3
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcCC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGVH 89 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~g 89 (176)
+|.+...+ ...+.+|++++|.|.+.+. .+.+.|+|+|..+.. ..........|.|.+++.+|+|.|+|.+.|..
T Consensus 102 ~P~i~~~p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~----~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~ 175 (242)
T 1p6f_A 102 TPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 175 (242)
T ss_dssp CCEEEEES-CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEE----EEEECSSEEEEEEEECCGGGCEEEEEEEEEET
T ss_pred CCceEccC-CCccCCCCcEEEEEecCCC-CCEEEEEECCCccCc----cccCCCceEEEEeCCCccccCEEEEEEEECCC
Confidence 56665444 3468899999999998754 468999999976543 12223567899999999999999999999862
Q ss_pred --CceEEEEEEEEEecCC
Q psy8425 90 --KDVVSAFAEVSINLRP 105 (176)
Q Consensus 90 --~~~~s~~~~l~V~~~p 105 (176)
....+..+.|.|.+++
T Consensus 176 ~~~s~~S~~~~l~V~~~~ 193 (242)
T 1p6f_A 176 HAWSFPSEPVKLLVTGDI 193 (242)
T ss_dssp TEECCCCCCEEEEEEC--
T ss_pred CcccCCCCCEEEEEeccC
Confidence 2233444888888643
No 372
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=99.21 E-value=1.7e-10 Score=73.03 Aligned_cols=75 Identities=23% Similarity=0.371 Sum_probs=57.1
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecC--CCeeEEEeC--CEE----eccCcceEEEEe--cceEEEEEcccCCCCCEEEE
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKD--NVE----ITTNKRLKIQFK--KKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~--g~~----l~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~ 82 (176)
+...+..+.+.+|++++|.|.+.+.+ .+.+.|+|+ +.. +....++.+... ....+|.|.+++.+|+|.|.
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~ 82 (113)
T 1sq2_N 3 VDQTPRSVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFSLRINDLTVEDGGTYR 82 (113)
T ss_dssp EEEECSEEEECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred eEeCCccEEEecCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceEeEEeCCCEEEEEeCCCCEEEEEECCCChhhCEEEE
Confidence 45567788899999999999998765 568999985 221 222355554432 34678999999999999999
Q ss_pred EEEEc
Q psy8425 83 CRGTG 87 (176)
Q Consensus 83 C~a~n 87 (176)
|.+.+
T Consensus 83 C~~~~ 87 (113)
T 1sq2_N 83 CGLGV 87 (113)
T ss_dssp EEECB
T ss_pred EEEEe
Confidence 99987
No 373
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.21 E-value=1e-11 Score=86.52 Aligned_cols=81 Identities=21% Similarity=0.178 Sum_probs=58.5
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeec-CC-CeeEEEeCCEEeccCcceE--EEE---ecceEEEEEcccCCCCCEEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGN-PL-PAVSWFKDNVEITTNKRLK--IQF---KKKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~-p~i~W~~~g~~l~~~~~~~--~~~---~~~~~~L~i~~v~~~d~G~Y 81 (176)
.+|.+...+....+.+|+.+.|.|.+.|. |. +.+.|+++|..+....... ... ....+.|.|..+..+|.|.|
T Consensus 113 ~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y 192 (213)
T 3mj8_L 113 AAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTF 192 (213)
T ss_dssp BCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCE
T ss_pred CCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEE
Confidence 56776655555555589999999999986 33 3899999999886521100 000 01235699999999999999
Q ss_pred EEEEEcCC
Q psy8425 82 ECRGTGVH 89 (176)
Q Consensus 82 ~C~a~n~g 89 (176)
+|.|.|.+
T Consensus 193 ~C~a~n~~ 200 (213)
T 3mj8_L 193 ICKVTHGG 200 (213)
T ss_dssp EEEEEETT
T ss_pred EEEEEECC
Confidence 99999983
No 374
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=99.21 E-value=9.9e-11 Score=76.03 Aligned_cols=90 Identities=19% Similarity=0.283 Sum_probs=60.1
Q ss_pred EEeCCceeEEecCCcEEEEEEEee---cCCCeeEEEeCCEEe-----c-----------------------cC--cceEE
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKG---NPLPAVSWFKDNVEI-----T-----------------------TN--KRLKI 59 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g---~p~p~i~W~~~g~~l-----~-----------------------~~--~~~~~ 59 (176)
+...+..+.+.+|++++|.|.... .+.+.+.|+|++... . .. .|+.+
T Consensus 7 v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~ 86 (135)
T 1xt5_A 7 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 86 (135)
T ss_dssp EECSCSEEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEE
T ss_pred EeCCCceEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEE
Confidence 445566788999999999999764 567789999954321 0 00 22222
Q ss_pred EEecceEEEEEcccCCCCCEEEEEEEEcC-CCc---eEEEEEEEEEec
Q psy8425 60 QFKKKRSTLIITRIRSEDAGRYECRGTGV-HKD---VVSAFAEVSINL 103 (176)
Q Consensus 60 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~---~~s~~~~l~V~~ 103 (176)
.. ....+|.|.+++.+|+|.|.|.+.+. ... .....+.|.|..
T Consensus 87 ~~-~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V~g 133 (135)
T 1xt5_A 87 AN-LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTG 133 (135)
T ss_dssp SC-TTSCCEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEEEEET
T ss_pred ec-CCCCeEEECCCChhhCcEEEEEEEcCCccccccccceeEEEEEec
Confidence 11 12467999999999999999999986 321 122226777754
No 375
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.21 E-value=1.8e-11 Score=94.88 Aligned_cols=80 Identities=14% Similarity=0.111 Sum_probs=54.6
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeec-CC-CeeEEEeCCEEeccCcceEEEEe----cceEEEEEcccCCCCCEEEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGN-PL-PAVSWFKDNVEITTNKRLKIQFK----KKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~-p~i~W~~~g~~l~~~~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C 83 (176)
+|.+...+....+.+|+.+.|.|.+.|. |. +.+.|++++..+........... ...+.|.|.++..+| |.|+|
T Consensus 132 ~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C 210 (457)
T 1hzh_H 132 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYIC 210 (457)
T ss_dssp CCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEE
T ss_pred CCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEE
Confidence 5555443333446889999999999987 65 78999999965431100011000 112479999999999 99999
Q ss_pred EEEcC-CC
Q psy8425 84 RGTGV-HK 90 (176)
Q Consensus 84 ~a~n~-g~ 90 (176)
.|.|. +.
T Consensus 211 ~a~n~~~~ 218 (457)
T 1hzh_H 211 NVNHKPSN 218 (457)
T ss_dssp EEEEGGGT
T ss_pred EEEeCCCC
Confidence 99998 44
No 376
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.20 E-value=1.5e-11 Score=84.15 Aligned_cols=73 Identities=14% Similarity=0.226 Sum_probs=56.5
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
+|.+...+ +..+.+|+++.|.|.+.+.| +.+.|+|+|..+....... .....|.|.+++.+|+|.|+|.|.|.
T Consensus 94 ~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~~~----~~~~~L~i~~v~~~D~G~Y~C~a~n~ 166 (184)
T 2gi7_A 94 KPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNPER----WYRASFPIITVTAAHSGTYRCYSFSS 166 (184)
T ss_dssp CCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCCCE----EEEESSSEEEETTCCSEEEEEEEECT
T ss_pred CCEEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceecCC----CceEEEEEccCCccCCeEEEEEEEeC
Confidence 56665544 45678999999999987654 6899999998776522111 24567999999999999999999997
No 377
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=99.20 E-value=1.9e-10 Score=72.29 Aligned_cols=87 Identities=22% Similarity=0.291 Sum_probs=60.2
Q ss_pred CceeEEecCCcEEEEEEEeecC-CCeeEEEeCCE--Eec-----------cCcceEEEEe--cceEEEEEcccCCCCCEE
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNP-LPAVSWFKDNV--EIT-----------TNKRLKIQFK--KKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p-~p~i~W~~~g~--~l~-----------~~~~~~~~~~--~~~~~L~i~~v~~~d~G~ 80 (176)
|..+.+.+|++++|.|...+.. .+.+.|+|... ... ...|+.+... ....+|.|.+++.+|+|.
T Consensus 3 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~ 82 (110)
T 2q87_A 3 ARTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGT 82 (110)
T ss_dssp EEEEEECTTSCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGCEE
T ss_pred CcEEEEeCCCcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHCEE
Confidence 4567899999999999987654 36899998531 110 1244444432 335689999999999999
Q ss_pred EEEEEEcCC-C--ceEEEEEEEEEecCC
Q psy8425 81 YECRGTGVH-K--DVVSAFAEVSINLRP 105 (176)
Q Consensus 81 Y~C~a~n~g-~--~~~s~~~~l~V~~~p 105 (176)
|.|.+.+.. + .... +.|.|.+.|
T Consensus 83 Y~C~~~~~~~g~~~~~~--~~v~v~V~p 108 (110)
T 2q87_A 83 YWCGVDTPWLQDFHDPV--VEVEVSVFP 108 (110)
T ss_dssp EEEEEECTTSCCBCCCS--EEEEEEEC-
T ss_pred EEEEEecCccCccCCcc--EEEEEEEec
Confidence 999999872 2 2334 566666655
No 378
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.20 E-value=2.4e-10 Score=89.09 Aligned_cols=75 Identities=15% Similarity=0.304 Sum_probs=55.1
Q ss_pred EeCCceeEEecCCcEEEEEEEeecC--CCeeEEEeC--CEEec-----------------cCcceEEEEe--cceEEEEE
Q psy8425 14 VSGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKD--NVEIT-----------------TNKRLKIQFK--KKRSTLII 70 (176)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i 70 (176)
+..+..+.+.+|++++|.|.+.+.+ .+.+.|||+ +..+. ...|+.+... ....+|.|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 84 (475)
T 1iga_A 5 LEQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGL 84 (475)
T ss_pred eccCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEE
Confidence 3456678899999999999998765 568999985 22110 1234443322 23568999
Q ss_pred cccCCCCCEEEEEEEEcC
Q psy8425 71 TRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 71 ~~v~~~d~G~Y~C~a~n~ 88 (176)
.+++.+|+|.|.|.+.|.
T Consensus 85 ~~v~~~D~G~Y~C~~~~~ 102 (475)
T 1iga_A 85 SSLRPEDTAVYYCARDPY 102 (475)
T ss_pred CCCChhhCEEEEEEEecc
Confidence 999999999999999997
No 379
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.20 E-value=7.9e-11 Score=85.20 Aligned_cols=93 Identities=17% Similarity=0.247 Sum_probs=65.7
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecC-----CCeeEEEeCC--EE---ec---------cCcceEEEEecceEEEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNP-----LPAVSWFKDN--VE---IT---------TNKRLKIQFKKKRSTLI 69 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p-----~p~i~W~~~g--~~---l~---------~~~~~~~~~~~~~~~L~ 69 (176)
..+.+...+..+.+.+|++++|.|.+.+.+ .+.+.|+|+. .. +. ...++.+.......+|.
T Consensus 14 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~ 93 (268)
T 1x9q_A 14 SDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLK 93 (268)
T ss_dssp CCCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEE
Confidence 455667778888899999999999998887 4789999842 21 11 13455554445567899
Q ss_pred EcccCCCCCEEEEEEEEcC-CCce-EEEEEEEEEec
Q psy8425 70 ITRIRSEDAGRYECRGTGV-HKDV-VSAFAEVSINL 103 (176)
Q Consensus 70 i~~v~~~d~G~Y~C~a~n~-g~~~-~s~~~~l~V~~ 103 (176)
|.+++.+|+|.|.|.+.|. +... .. ..|.|..
T Consensus 94 I~~v~~~DsG~Y~C~~~~~~~~~~~~~--~~L~V~~ 127 (268)
T 1x9q_A 94 INRVEAEDLGVYFCSQSTHVPWTFGGG--TKLEIKS 127 (268)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCC--EEEC---
T ss_pred ECCCChhHCEEEEEEEecCCCceEcCC--EEEEEcc
Confidence 9999999999999999987 3211 22 5566654
No 380
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.19 E-value=1.2e-10 Score=83.71 Aligned_cols=73 Identities=26% Similarity=0.349 Sum_probs=53.0
Q ss_pred CCceeEEecCCcEEEEEEEeec--CCCeeEEEeCC--E---Ee--------------ccCcceEEEEe--cceEEEEEcc
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKGN--PLPAVSWFKDN--V---EI--------------TTNKRLKIQFK--KKRSTLIITR 72 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g~--p~p~i~W~~~g--~---~l--------------~~~~~~~~~~~--~~~~~L~i~~ 72 (176)
.+..+.+.+|++++|.|.+.+. +.+.+.|+|.. . .+ ....|+.+... ....+|.|.+
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (253)
T 3liz_H 6 ESGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSS 85 (253)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECS
T ss_pred cCCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECC
Confidence 3456789999999999999763 35689999832 1 11 01245555433 3456799999
Q ss_pred cCCCCCEEEEEEEEcC
Q psy8425 73 IRSEDAGRYECRGTGV 88 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n~ 88 (176)
++.+|+|.|.|.+.+.
T Consensus 86 v~~~DsG~Y~C~~~~~ 101 (253)
T 3liz_H 86 LKSEDTAMYYCTRDPA 101 (253)
T ss_dssp CCGGGCEEEEEEECCB
T ss_pred CChhhCEEEEEEEecC
Confidence 9999999999999875
No 381
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=99.19 E-value=1.2e-10 Score=73.16 Aligned_cols=72 Identities=19% Similarity=0.410 Sum_probs=53.8
Q ss_pred CceeEEecCCcEEEEEE-EeecC-CCeeEEEeCCEEec------------cCcceEEEEe--cceEEEEEcccCCCCCEE
Q psy8425 17 LRNVSVKLRQSLRLVCR-CKGNP-LPAVSWFKDNVEIT------------TNKRLKIQFK--KKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~-~~g~p-~p~i~W~~~g~~l~------------~~~~~~~~~~--~~~~~L~i~~v~~~d~G~ 80 (176)
|..+.+.+|++++|.|. +.+.+ .+.+.|+|....+. ...|+.+... ....+|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~ 86 (109)
T 1pew_A 7 PHSVSESPGKTVTISCTRSSGNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEAD 86 (109)
T ss_dssp CSEEEECTTSCEEEEEEESSSCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCCEEEcCCCCEEEEEEeCCCCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhhCEE
Confidence 56788999999999999 77665 47899999762110 1245555421 345689999999999999
Q ss_pred EEEEEEcC
Q psy8425 81 YECRGTGV 88 (176)
Q Consensus 81 Y~C~a~n~ 88 (176)
|.|.+.+.
T Consensus 87 Y~C~~~~~ 94 (109)
T 1pew_A 87 YYCQSYDA 94 (109)
T ss_dssp EEEEEEET
T ss_pred EEEEEEeC
Confidence 99999875
No 382
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=99.19 E-value=2.7e-10 Score=71.96 Aligned_cols=76 Identities=20% Similarity=0.296 Sum_probs=56.9
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecC-----CCeeEEEeCC--E---Eec---------cCcceEEEEecceEEEEEccc
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNP-----LPAVSWFKDN--V---EIT---------TNKRLKIQFKKKRSTLIITRI 73 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p-----~p~i~W~~~g--~---~l~---------~~~~~~~~~~~~~~~L~i~~v 73 (176)
+...+..+.+.+|++++|.|.+.+.+ .+.+.|+|.. . .+. ...|+.+.......+|.|.++
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v 83 (113)
T 1dlf_L 4 MTQTPLSLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRV 83 (113)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSC
T ss_pred EEEeCCEEEEcCCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEccCCEEEEEECCC
Confidence 45556778999999999999998765 3689999842 1 111 124555444455678999999
Q ss_pred CCCCCEEEEEEEEcC
Q psy8425 74 RSEDAGRYECRGTGV 88 (176)
Q Consensus 74 ~~~d~G~Y~C~a~n~ 88 (176)
+.+|+|.|.|.+.+.
T Consensus 84 ~~~DsG~Y~C~~~~~ 98 (113)
T 1dlf_L 84 EAEDLGVYFCSQSTH 98 (113)
T ss_dssp CGGGCEEEEEEECSS
T ss_pred ChHHCEEEEEEEecC
Confidence 999999999999876
No 383
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.19 E-value=1.8e-10 Score=83.73 Aligned_cols=94 Identities=20% Similarity=0.260 Sum_probs=62.6
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecC--CCeeEEEeCC--EEe-----------------ccCcceEEEEe--cceEEEE
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDN--VEI-----------------TTNKRLKIQFK--KKRSTLI 69 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g--~~l-----------------~~~~~~~~~~~--~~~~~L~ 69 (176)
++..+....+.+|++++|.|.+.+.| .+.+.|+|++ ..+ ....++.+... ....+|.
T Consensus 137 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 216 (276)
T 3auv_A 137 QLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQ 216 (276)
T ss_dssp EEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEE
T ss_pred EEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEE
Confidence 34445677899999999999999876 5899999963 211 01235554432 2445899
Q ss_pred EcccCCCCCEEEEEEEEcC----CCceEEEEEEEEEecCCC
Q psy8425 70 ITRIRSEDAGRYECRGTGV----HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 70 i~~v~~~d~G~Y~C~a~n~----g~~~~s~~~~l~V~~~p~ 106 (176)
|.+++.+|+|.|.|.+.|. +......-..|.|...|.
T Consensus 217 I~~v~~~DsG~Y~C~a~n~~~~~~~~~fg~gt~l~V~~~~~ 257 (276)
T 3auv_A 217 MNSLRAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSASA 257 (276)
T ss_dssp ECSCCGGGCEEEEEEEECSSTTCSCCCBCCCEEEEEC----
T ss_pred ECCCChhHCEEEEEEEEcCcCCcCceEECCCEEEEEccccc
Confidence 9999999999999999996 221111115777765444
No 384
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.19 E-value=4e-12 Score=97.98 Aligned_cols=85 Identities=13% Similarity=0.289 Sum_probs=58.7
Q ss_pred CCceeEEecCCcEEEEEEEeecC--CCeeEEEeCC--EEec-----------------cCcceEEEEe--cceEEEEEcc
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDN--VEIT-----------------TNKRLKIQFK--KKRSTLIITR 72 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g--~~l~-----------------~~~~~~~~~~--~~~~~L~i~~ 72 (176)
.+..+.+.+|+++.|.|.+.+.+ .+.+.|+|++ ..+. ...|+.+... ....+|.|.+
T Consensus 5 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 84 (434)
T 1igy_B 5 ESGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSS 84 (434)
T ss_dssp CCCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECS
T ss_pred CCCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECC
Confidence 34567899999999999998864 6789999852 2210 0134333221 2245899999
Q ss_pred cCCCCCEEEEEEEEcC-CCceEEEEEEEEEe
Q psy8425 73 IRSEDAGRYECRGTGV-HKDVVSAFAEVSIN 102 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~ 102 (176)
++.+|+|.|.|.+.|. +..... +.|.|.
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~~~~--~~l~V~ 113 (434)
T 1igy_B 85 LTSDDSAVYYCVREGEVPYWGQG--TTVTVS 113 (434)
T ss_dssp BCGGGCSEECCCCSSSSCCCCCC--EECEEC
T ss_pred CChHHCEEEEEEEEccccccCCc--eEEEEc
Confidence 9999999999999986 333333 566665
No 385
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=99.19 E-value=2.9e-10 Score=72.63 Aligned_cols=91 Identities=15% Similarity=0.239 Sum_probs=61.3
Q ss_pred EeCCceeEEecCCcEEEEEEEeecC---CCeeEEEeCC--E-E--ec---------cCcceEEEEecceEEEEEcccCCC
Q psy8425 14 VSGLRNVSVKLRQSLRLVCRCKGNP---LPAVSWFKDN--V-E--IT---------TNKRLKIQFKKKRSTLIITRIRSE 76 (176)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~~~g~p---~p~i~W~~~g--~-~--l~---------~~~~~~~~~~~~~~~L~i~~v~~~ 76 (176)
..++ .+.+.+|++++|.|...+.+ .+.+.|+|.. . + +. ...|+.+.......+|.|.+++.+
T Consensus 5 ~q~~-~~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~~~ 83 (120)
T 1oaq_L 5 TQES-ALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGNKAALTITGAQTE 83 (120)
T ss_dssp EECS-EEEECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEEETTEEEEEEESCCGG
T ss_pred EcCC-cEEEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEecCCCeEEEEECCCChh
Confidence 3434 48899999999999998765 4679999832 1 1 11 124555544455678999999999
Q ss_pred CCEEEEEEEEcCCCceEEEEEEEEEecCC
Q psy8425 77 DAGRYECRGTGVHKDVVSAFAEVSINLRP 105 (176)
Q Consensus 77 d~G~Y~C~a~n~g~~~~s~~~~l~V~~~p 105 (176)
|+|.|.|.+.+.+......-..|.|...|
T Consensus 84 DsG~Y~C~~~~~~~~~fg~gt~L~V~~~~ 112 (120)
T 1oaq_L 84 DEAIYFCALWYSNHLVFGGGTKLTVLGQP 112 (120)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEECC--
T ss_pred hCeEEEEEEccCCCcEECCCEEEEEcCCC
Confidence 99999999987632211112577776544
No 386
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.19 E-value=9.9e-10 Score=77.03 Aligned_cols=73 Identities=25% Similarity=0.370 Sum_probs=53.0
Q ss_pred CCceeEEecCCcEEEEEEEeecC--CCeeEEEeC--CEEec-------------------cCcceEEEEe--cceEEEEE
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKD--NVEIT-------------------TNKRLKIQFK--KKRSTLII 70 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~--g~~l~-------------------~~~~~~~~~~--~~~~~L~i 70 (176)
.+..+.+.+|++++|.|.+.+.+ .+.+.|+|. +..+. ...|+.+... ....+|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 85 (221)
T 3m8o_H 6 ESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQM 85 (221)
T ss_dssp EESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEE
T ss_pred ccCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEE
Confidence 34457799999999999998743 578999973 21110 1245554432 34568999
Q ss_pred cccCCCCCEEEEEEEEcC
Q psy8425 71 TRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 71 ~~v~~~d~G~Y~C~a~n~ 88 (176)
.+++.+|+|.|.|.+.+.
T Consensus 86 ~~v~~~DsG~Y~C~~~~~ 103 (221)
T 3m8o_H 86 NSLKSDDTAMYYCVIRGD 103 (221)
T ss_dssp CSCCGGGCEEEEEEEESC
T ss_pred CCCCHHHCEEEEEEEECC
Confidence 999999999999999986
No 387
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.18 E-value=3.7e-10 Score=73.62 Aligned_cols=96 Identities=23% Similarity=0.312 Sum_probs=64.5
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeec-CCCeeEEEeCCE----EeccC-----cceEEEE-----ecceEEEEEcccCC
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGN-PLPAVSWFKDNV----EITTN-----KRLKIQF-----KKKRSTLIITRIRS 75 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~p~i~W~~~g~----~l~~~-----~~~~~~~-----~~~~~~L~i~~v~~ 75 (176)
..+...+..+.+.+|++++|.|.+.+. +.+.+.|+|++. .+... .++.... .....+|.|.+++.
T Consensus 9 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~ 88 (136)
T 2d9c_A 9 LQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITP 88 (136)
T ss_dssp CCEECCCSEEEEETTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCT
T ss_pred eEEEecCcEEEEcCCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCH
Confidence 345566678899999999999999875 567899999752 11110 1111100 01256899999999
Q ss_pred CCCEEEEEEEEcCCC---ce--EEEEEEEEEecCCC
Q psy8425 76 EDAGRYECRGTGVHK---DV--VSAFAEVSINLRPD 106 (176)
Q Consensus 76 ~d~G~Y~C~a~n~g~---~~--~s~~~~l~V~~~p~ 106 (176)
+|+|.|.|.+.+.+. .. ....+.|.|..+|.
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~g~~t~L~V~~~~s 124 (136)
T 2d9c_A 89 ADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPS 124 (136)
T ss_dssp TTCEEEEEEEEECCSSSCEEEEECCCEEEEEECCCC
T ss_pred HHCEEEEEEEEeCCCCcccceeeCCCeEEEEEeCCC
Confidence 999999999988632 11 11127888887664
No 388
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.18 E-value=3.9e-11 Score=86.66 Aligned_cols=72 Identities=28% Similarity=0.393 Sum_probs=54.1
Q ss_pred CceeEEecCCcEEEEEEEeecC--CCeeEEEeCC--EEec-----------------cCcceEEEEe--cceEEEEEccc
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDN--VEIT-----------------TNKRLKIQFK--KKRSTLIITRI 73 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g--~~l~-----------------~~~~~~~~~~--~~~~~L~i~~v 73 (176)
+..+.+.+|++++|.|.+.+.+ .+.+.|+|.. ..+. ...|+.+... ....+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (257)
T 3bn9_D 7 SGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSL 86 (257)
T ss_dssp ECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESC
T ss_pred cCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCC
Confidence 4456799999999999998765 5789999842 1110 1245554432 34578999999
Q ss_pred CCCCCEEEEEEEEcC
Q psy8425 74 RSEDAGRYECRGTGV 88 (176)
Q Consensus 74 ~~~d~G~Y~C~a~n~ 88 (176)
+.+|+|.|.|.+.+.
T Consensus 87 ~~~DsG~Y~C~~~~~ 101 (257)
T 3bn9_D 87 RAEDTAVYYCARPYL 101 (257)
T ss_dssp CGGGCEEEEEEEECC
T ss_pred ChhhCEEEEEEEecC
Confidence 999999999999987
No 389
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.18 E-value=1.7e-11 Score=85.41 Aligned_cols=68 Identities=15% Similarity=0.267 Sum_probs=44.5
Q ss_pred ecCCcEEEEEEEeecCC----CeeEEEeCCEEeccCcceEEEEecceE------EEEEcccCCCCCEEEEEEEEcC-CCc
Q psy8425 23 KLRQSLRLVCRCKGNPL----PAVSWFKDNVEITTNKRLKIQFKKKRS------TLIITRIRSEDAGRYECRGTGV-HKD 91 (176)
Q Consensus 23 ~~G~~~~l~C~~~g~p~----p~i~W~~~g~~l~~~~~~~~~~~~~~~------~L~i~~v~~~d~G~Y~C~a~n~-g~~ 91 (176)
.+|+++.|.|.+.|.++ +.+.|+|++.++.......... ..++ .|.|......|+|.|+|.|.|. +..
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~-~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~ 94 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREE-QYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 94 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEE-CTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSS
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCcee-ccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCc
Confidence 68999999999998753 3899999998775421100000 1112 2333333344599999999998 544
No 390
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.17 E-value=1.7e-11 Score=84.13 Aligned_cols=57 Identities=21% Similarity=0.409 Sum_probs=49.5
Q ss_pred EecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 22 VKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 22 v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
+.+|+++.|.|.+ |.|.+.|+|+|..+.... .....|.|.++..+|+|.|+|.|.|.
T Consensus 119 ~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~-------~~~~~L~i~~v~~~D~G~Y~C~a~N~ 175 (186)
T 1jbj_A 119 SRGDGSVLLTCGL---TDKTIKWLKDGSIISPLN-------ATKNTWNLGNNAKDPRGTYQCQGAKE 175 (186)
T ss_dssp CSSSCEEEEECSS---SCSCEEEEETTEECCCSS-------CCSSCCEEEETTSCCEEEEEEEESSC
T ss_pred cCCCCeEEEEeeC---CCCeEEEEECCEECcccC-------CCcceEEECCCCcCcCEEEEEEEEcC
Confidence 3489999999988 889999999999987532 24568999999999999999999998
No 391
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=99.17 E-value=4.9e-11 Score=74.51 Aligned_cols=84 Identities=19% Similarity=0.290 Sum_probs=57.1
Q ss_pred ceeEEecCCcEEEEEEEeecCCC---eeEEEeCCEE--------ec---------cCcceEEEEe--cceEEEEEcccCC
Q psy8425 18 RNVSVKLRQSLRLVCRCKGNPLP---AVSWFKDNVE--------IT---------TNKRLKIQFK--KKRSTLIITRIRS 75 (176)
Q Consensus 18 ~~~~v~~G~~~~l~C~~~g~p~p---~i~W~~~g~~--------l~---------~~~~~~~~~~--~~~~~L~i~~v~~ 75 (176)
+.+.+.+|++++|.|...+.+.+ .+.|++.... +. ...++.+... ....+|.|.+++.
T Consensus 2 ~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~ 81 (109)
T 2oyp_A 2 DGYKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTL 81 (109)
T ss_dssp EEEEECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCG
T ss_pred CCEEEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCC
Confidence 35678999999999998766533 4899995421 00 1122222111 2346899999999
Q ss_pred CCCEEEEEEEEcC-CCceEEEEEEEEEec
Q psy8425 76 EDAGRYECRGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 76 ~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~ 103 (176)
+|+|.|.|.+.+. +..... +.|.|.+
T Consensus 82 ~D~G~Y~C~v~~~~~~~~~~--~~l~V~V 108 (109)
T 2oyp_A 82 DDHGTYCCRIQFPGLMNDKK--LELKLDI 108 (109)
T ss_dssp GGCEEEEEEECCSSTTCCEE--EEEEEEE
T ss_pred hhCeEEEEEEEcCCcccceE--EEEEEEe
Confidence 9999999999998 555555 6666653
No 392
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.17 E-value=3.5e-11 Score=83.80 Aligned_cols=67 Identities=16% Similarity=0.286 Sum_probs=51.2
Q ss_pred EecCCcEEEEEEEeec----CCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CCceEE
Q psy8425 22 VKLRQSLRLVCRCKGN----PLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HKDVVS 94 (176)
Q Consensus 22 v~~G~~~~l~C~~~g~----p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~s 94 (176)
+.+|+.++|.|.+.+. |.|.+.|++++..+... +. ...+.|.|..+..+|.|.|+|.|.|. +....+
T Consensus 135 ~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~~~-~~-----~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~ 206 (214)
T 2zg1_A 135 LESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDP-ET-----TRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTE 206 (214)
T ss_dssp CCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSSSCS-SC-----CCSSEEEECCCTTCCSCEEEEEEECC----CCE
T ss_pred ccCCCeEEEEEEeccCCCCCCCceEEEeCCCCccCCC-Cc-----eeEEEEEEecccHHcCcEEEEEEEeCCCCcceE
Confidence 6789999999999764 88999999998654321 11 34568999999999999999999998 554444
No 393
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.17 E-value=2.6e-11 Score=84.44 Aligned_cols=79 Identities=20% Similarity=0.168 Sum_probs=56.7
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEee-cCCC-eeEEEeCCEEeccCcceEEEE--e-----cceEEEEEcccCCCCCEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKG-NPLP-AVSWFKDNVEITTNKRLKIQF--K-----KKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g-~p~p-~i~W~~~g~~l~~~~~~~~~~--~-----~~~~~L~i~~v~~~d~G~ 80 (176)
+|.+...+....+.+|+.+.|.|.+.| .|.+ .+.|+++|..+.......... . ...+.|.|.++..+|+|.
T Consensus 112 ~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~ 191 (213)
T 3d9a_L 112 APTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNS 191 (213)
T ss_dssp CCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCE
T ss_pred CceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCE
Confidence 666654333333457999999999987 5665 899999999887641111100 0 113589999999999999
Q ss_pred EEEEEEcC
Q psy8425 81 YECRGTGV 88 (176)
Q Consensus 81 Y~C~a~n~ 88 (176)
|+|.|.|.
T Consensus 192 Y~C~a~n~ 199 (213)
T 3d9a_L 192 YTCEATHK 199 (213)
T ss_dssp EEEEEECT
T ss_pred EEEEEEEc
Confidence 99999998
No 394
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=99.17 E-value=1e-10 Score=73.48 Aligned_cols=83 Identities=16% Similarity=0.306 Sum_probs=59.9
Q ss_pred CceeEEecCCcEEEEEEE-eecCCCeeEEEeCC-EEec------------c--CcceEEEEecceEEEEEcccCCCCCEE
Q psy8425 17 LRNVSVKLRQSLRLVCRC-KGNPLPAVSWFKDN-VEIT------------T--NKRLKIQFKKKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~-~g~p~p~i~W~~~g-~~l~------------~--~~~~~~~~~~~~~~L~i~~v~~~d~G~ 80 (176)
...+.+.+|++++|.|.. .+.+.+.+.|+++. ..+. . ..|+.+ .....+|.|.+++.+|+|.
T Consensus 10 ~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~--~~~~~sL~I~~v~~~DsG~ 87 (110)
T 2ptt_A 10 IPDINAYTGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYL--EENNGALHISNVRKEDKGT 87 (110)
T ss_dssp CCSEEEETTSCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEE--CTTTCCEEESSCCGGGCEE
T ss_pred CCCEEEecCCcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEE--eCCCccEEECCCCcccCeE
Confidence 445789999999999998 66777899999942 2121 0 023322 2256789999999999999
Q ss_pred EEEEEEcCCCceEEEEEEEEEec
Q psy8425 81 YECRGTGVHKDVVSAFAEVSINL 103 (176)
Q Consensus 81 Y~C~a~n~g~~~~s~~~~l~V~~ 103 (176)
|.|.+.+....... +.|.|..
T Consensus 88 Y~C~v~~~~~~~~~--~~L~V~d 108 (110)
T 2ptt_A 88 YYMRVLRETENELK--ITLEVFD 108 (110)
T ss_dssp EEEEEESSSBCCEE--EEEEEEC
T ss_pred EEEEEEcCCCcEEE--EEEEEEc
Confidence 99999877433344 7788865
No 395
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.17 E-value=3.4e-10 Score=80.26 Aligned_cols=71 Identities=21% Similarity=0.330 Sum_probs=52.7
Q ss_pred CceeEEecCCcEEEEEEEeecC--CCeeEEEeCC--E---Eec-------------cCcceEEEEe--cceEEEEEcccC
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDN--V---EIT-------------TNKRLKIQFK--KKRSTLIITRIR 74 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g--~---~l~-------------~~~~~~~~~~--~~~~~L~i~~v~ 74 (176)
+..+.+.+|++++|.|.+.+.+ .+.+.|||.. . .+. ...|+.+... ....+|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (232)
T 1dn0_B 7 WGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVT 86 (232)
T ss_dssp ECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCC
Confidence 4557899999999999998765 5789999842 2 110 1245555432 245689999999
Q ss_pred CCCCEEEEEEEEc
Q psy8425 75 SEDAGRYECRGTG 87 (176)
Q Consensus 75 ~~d~G~Y~C~a~n 87 (176)
.+|+|.|.|.+.+
T Consensus 87 ~~D~G~Y~C~~~~ 99 (232)
T 1dn0_B 87 AADTAVYYCARPP 99 (232)
T ss_dssp GGGCEEEEEEECS
T ss_pred cccCEEEEEEEec
Confidence 9999999999984
No 396
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=99.17 E-value=1.4e-10 Score=75.10 Aligned_cols=93 Identities=16% Similarity=0.288 Sum_probs=64.5
Q ss_pred EeCCceeEEecCCcEEEEEEEeecC-CCeeEEEeC--CE--E-e-c---------cCcceEEEEe--cceEEEEEcccCC
Q psy8425 14 VSGLRNVSVKLRQSLRLVCRCKGNP-LPAVSWFKD--NV--E-I-T---------TNKRLKIQFK--KKRSTLIITRIRS 75 (176)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~~~g~p-~p~i~W~~~--g~--~-l-~---------~~~~~~~~~~--~~~~~L~i~~v~~ 75 (176)
++.+..+.+.+|++++|.|...+.. ...+.|++. +. . + . ...|+.+... ....+|.|.+++.
T Consensus 5 ~Q~P~~~~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~ 84 (129)
T 3rrq_A 5 TFSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRARR 84 (129)
T ss_dssp EEECSEEEEETTSCEEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCCG
T ss_pred EECCCEEEEeCCCCEEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCCh
Confidence 4556778899999999999988764 457899972 21 1 1 1 0134544432 3457899999999
Q ss_pred CCCEEEEEEEEcC-CCc--eEEEEEEEEEecCCC
Q psy8425 76 EDAGRYECRGTGV-HKD--VVSAFAEVSINLRPD 106 (176)
Q Consensus 76 ~d~G~Y~C~a~n~-g~~--~~s~~~~l~V~~~p~ 106 (176)
+|+|.|.|.+.+. +.. ..+..+.|.|...|.
T Consensus 85 ~Dsg~Y~C~~~~~~~~~~~~~s~~~~L~V~~~~~ 118 (129)
T 3rrq_A 85 NDSGTYLCGAISLAPKLQIKESLRAELRVTERRA 118 (129)
T ss_dssp GGCEEEEEEEEECGGGCEEEECCCEEEEEECCCC
T ss_pred hHCEEEEEEEEecCCCceeeEeceEEEEEecCcc
Confidence 9999999999987 443 112237888887554
No 397
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.16 E-value=2.5e-11 Score=86.19 Aligned_cols=81 Identities=10% Similarity=0.083 Sum_probs=58.0
Q ss_pred CCCeE-EeCCceeEEecCCcEEEEEEEeec-CC-C-eeEEEeCCEEe-ccCcceEEEEe-----cceEEEEEcccCCCCC
Q psy8425 9 IHPIE-VSGLRNVSVKLRQSLRLVCRCKGN-PL-P-AVSWFKDNVEI-TTNKRLKIQFK-----KKRSTLIITRIRSEDA 78 (176)
Q Consensus 9 ~~p~~-~~~~~~~~v~~G~~~~l~C~~~g~-p~-p-~i~W~~~g~~l-~~~~~~~~~~~-----~~~~~L~i~~v~~~d~ 78 (176)
.+|.+ +..+....+.+|+.++|.|.+.|. |. | .+.|+++|..+ ...... .... .....|.|.+++.+|.
T Consensus 11 ~~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~-~~~~~~g~~~~~s~L~I~~~~~~D~ 89 (231)
T 2w59_A 11 SPIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMV-LQEHFNGTYSASSAVPVSTQDWLSG 89 (231)
T ss_dssp -CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCE-EEECTTSCEEEEEEEECCHHHHHTT
T ss_pred CCCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeecccccccc-ceECCCCcEEEEEEEEecchhccCC
Confidence 34553 456666677899999999999985 64 5 99999999877 322111 1110 1235799999999999
Q ss_pred EEEEEEEEcC-CC
Q psy8425 79 GRYECRGTGV-HK 90 (176)
Q Consensus 79 G~Y~C~a~n~-g~ 90 (176)
|.|+|.+.|. +.
T Consensus 90 g~Y~C~~~~~~~~ 102 (231)
T 2w59_A 90 ERFTCTVQHEELP 102 (231)
T ss_dssp CCEEEEEECTTCS
T ss_pred CEEEEEEEcCCCC
Confidence 9999999998 44
No 398
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=99.16 E-value=4.3e-10 Score=73.32 Aligned_cols=94 Identities=19% Similarity=0.209 Sum_probs=66.3
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeC---CEEe----ccCcceEEEEecceEEEEEcccCCCCCEEEEEE
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKD---NVEI----TTNKRLKIQFKKKRSTLIITRIRSEDAGRYECR 84 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~---g~~l----~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 84 (176)
.+...+..+.+.+|++++|.|...+. ...+.|||. |..+ ....++.........+|.|.+++.+|+|.|.|.
T Consensus 20 ~v~Q~p~~~~v~~G~svtL~C~~s~~-~~~v~Wyrq~~~g~~~~~l~~~~~rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C~ 98 (134)
T 3kg5_A 20 RIWQSPRFIARKRGFTVKMHCYMNSA-SGNVSWLWKQEMDENPQQLKLEKGRMEESQNESLATLTIQGIRFEDNGIYFCQ 98 (134)
T ss_dssp CCEEECSEEEEETTCCEEEEEECCCT-TCCCEEEEESSSSSCCEECCCCTTTEEEEECSSEEEEEECSCCTTTCEEEEEE
T ss_pred EEEEeCCEEEEeCCCCEEEEEEECCC-CceEEEEEECCCCCCcEEEEEECCeEEEEccCCEEEEEECCCCcCcCEEEEEE
Confidence 34566777899999999999998765 468999987 3322 123566655545677899999999999999999
Q ss_pred EEcC-CCc-eEEEEEEEEEecCCC
Q psy8425 85 GTGV-HKD-VVSAFAEVSINLRPD 106 (176)
Q Consensus 85 a~n~-g~~-~~s~~~~l~V~~~p~ 106 (176)
+.+. +.. ....-..|.|...|.
T Consensus 99 ~~~~~~~~~~fg~GT~L~V~~~p~ 122 (134)
T 3kg5_A 99 QKCNNTSEVYQGCGTELRVMGFST 122 (134)
T ss_dssp EECTTTCCEEECCCEEEEEECC--
T ss_pred EEcCCCCceEECCCEEEEEecCCC
Confidence 9876 211 111125777776443
No 399
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.16 E-value=3.3e-11 Score=90.21 Aligned_cols=75 Identities=15% Similarity=0.133 Sum_probs=53.4
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeec-CC-CeeEEEeCCEEecc---------CcceEEEEecceEEEEEcccCCCCC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGN-PL-PAVSWFKDNVEITT---------NKRLKIQFKKKRSTLIITRIRSEDA 78 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~-p~i~W~~~g~~l~~---------~~~~~~~~~~~~~~L~i~~v~~~d~ 78 (176)
+|.+...+....+.+|+.+.|.|.+.|. |. +.+.|+++|..+.. +..+. ..+.|.|.++..+|
T Consensus 120 ~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~-----~~s~L~i~~~~~~d- 193 (344)
T 1za6_B 120 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYS-----LSSVVTVPSSSLGT- 193 (344)
T ss_dssp CCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEE-----EEEEEEEETTHHHH-
T ss_pred CCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCCeECCCCCEE-----EEEEEEEcHHHcCC-
Confidence 4554433333346789999999999987 65 69999999875321 11111 13479999998888
Q ss_pred EEEEEEEEcC-CC
Q psy8425 79 GRYECRGTGV-HK 90 (176)
Q Consensus 79 G~Y~C~a~n~-g~ 90 (176)
|.|+|.|.|. +.
T Consensus 194 G~Y~C~a~n~~~~ 206 (344)
T 1za6_B 194 QTYICNVNHKPSN 206 (344)
T ss_dssp BCEEEEEEEGGGT
T ss_pred CcEEEEEEeCCCC
Confidence 9999999998 54
No 400
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=99.15 E-value=9.2e-10 Score=72.56 Aligned_cols=90 Identities=17% Similarity=0.223 Sum_probs=64.1
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeC--CE---Eec---------cCcceEEEEecceEEEEEcccCCCCC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKD--NV---EIT---------TNKRLKIQFKKKRSTLIITRIRSEDA 78 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~--g~---~l~---------~~~~~~~~~~~~~~~L~i~~v~~~d~ 78 (176)
+.+.+..+.+.+|++++|.|.+.+.+...+.|+|. +. .+. ...|+.+.......+|+|.+++.+|+
T Consensus 3 v~Q~p~~v~v~~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~~~Ds 82 (143)
T 3u6r_L 3 LTQSPATLSLSPGERATLSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISNLEPEDF 82 (143)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred EEECCCEEEEeCCCCEEEEEEECCCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEccCCEEEEEEccCcccCC
Confidence 45667778899999999999998776678999983 21 111 13455555445677999999999999
Q ss_pred EEEEEEEEcCCCceEEEEEEEEEec
Q psy8425 79 GRYECRGTGVHKDVVSAFAEVSINL 103 (176)
Q Consensus 79 G~Y~C~a~n~g~~~~s~~~~l~V~~ 103 (176)
|.|.|.+.+.. .....-..|.|..
T Consensus 83 G~Y~C~~~~~~-~~fg~gt~L~V~~ 106 (143)
T 3u6r_L 83 AVYYCQQRSDW-VTFGGGTKVEIKA 106 (143)
T ss_dssp EEEEEEECSSB-CEECCCEEEEEC-
T ss_pred EEEEEEEecCC-CEECCCEEEEECC
Confidence 99999998753 1111115677764
No 401
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.15 E-value=5.2e-11 Score=82.88 Aligned_cols=79 Identities=19% Similarity=0.169 Sum_probs=55.3
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeec-CCC-eeEEEeCCEEeccCcceEEE--Ee-----cceEEEEEcccCCCCCEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGN-PLP-AVSWFKDNVEITTNKRLKIQ--FK-----KKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~p-~i~W~~~g~~l~~~~~~~~~--~~-----~~~~~L~i~~v~~~d~G~ 80 (176)
+|.+...+....+.+|+.+.|.|.+.|. |.+ .+.|+|+|..+......... .. ...+.|.|..+..+|+|.
T Consensus 111 ~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~ 190 (210)
T 1lk3_L 111 APTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNL 190 (210)
T ss_dssp CCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCE
T ss_pred CCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCc
Confidence 5665543333334579999999999874 554 89999999988654111100 00 112479999999999999
Q ss_pred EEEEEEcC
Q psy8425 81 YECRGTGV 88 (176)
Q Consensus 81 Y~C~a~n~ 88 (176)
|+|.|.|.
T Consensus 191 Y~C~a~n~ 198 (210)
T 1lk3_L 191 YTCEVVHK 198 (210)
T ss_dssp EEEEEECT
T ss_pred EEEEEEec
Confidence 99999998
No 402
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.14 E-value=1.7e-10 Score=88.92 Aligned_cols=81 Identities=14% Similarity=0.180 Sum_probs=53.7
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeec-CCC-eeEEEeCCEEeccCcceEEEE---ecceEEEEEcccCCCCCEEEEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGN-PLP-AVSWFKDNVEITTNKRLKIQF---KKKRSTLIITRIRSEDAGRYECR 84 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~p-~i~W~~~g~~l~~~~~~~~~~---~~~~~~L~i~~v~~~d~G~Y~C~ 84 (176)
+|.+........+.+|+.+.|.|.+.|. |.| .+.|++++..+.......... ....+.|.|.++..+| |.|+|.
T Consensus 119 ~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~ 197 (434)
T 1igy_B 119 PPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCN 197 (434)
T ss_dssp CCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEE
T ss_pred CCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEE
Confidence 4544332222345789999999999987 777 999999987532100000000 0123579999999889 999999
Q ss_pred EEcC-CCc
Q psy8425 85 GTGV-HKD 91 (176)
Q Consensus 85 a~n~-g~~ 91 (176)
|.|. +..
T Consensus 198 a~n~~~~~ 205 (434)
T 1igy_B 198 VAHPASST 205 (434)
T ss_dssp EECTTTTC
T ss_pred EEeCCCCc
Confidence 9999 654
No 403
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.14 E-value=2.6e-10 Score=81.41 Aligned_cols=76 Identities=16% Similarity=0.310 Sum_probs=56.0
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeecC--CCeeEEEeC--CEEec-----------------cCcceEEEEe--cceEEE
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKD--NVEIT-----------------TNKRLKIQFK--KKRSTL 68 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L 68 (176)
.++..+....+.+|++++|.|.+.+.+ .+.+.|+|+ +..+. ...++.+... ....+|
T Consensus 133 ~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 212 (250)
T 3esu_F 133 VQLQQSGPELVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYM 212 (250)
T ss_dssp --CEECCCEEECTTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEE
T ss_pred eEEecCCceEEcCCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEE
Confidence 344455667899999999999998876 789999997 43321 1134444332 344589
Q ss_pred EEcccCCCCCEEEEEEEEc
Q psy8425 69 IITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 69 ~i~~v~~~d~G~Y~C~a~n 87 (176)
.|.+++.+|+|.|.|.+.+
T Consensus 213 ~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 213 QLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EECSCCGGGCEEEEEEEEC
T ss_pred EECCCCcccCEEEEEEEec
Confidence 9999999999999999997
No 404
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.14 E-value=2e-10 Score=79.57 Aligned_cols=75 Identities=11% Similarity=0.151 Sum_probs=54.3
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEe-cceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFK-KKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
+|.+...+. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+........... .....|.|.+++ |+|.|+|.|.+.
T Consensus 108 ~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 108 KPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp CCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEET
T ss_pred CCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcC
Confidence 466655444 46899999999999886 5678999999987654221111110 125789999998 999999999865
No 405
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=99.14 E-value=1.2e-10 Score=74.70 Aligned_cols=87 Identities=18% Similarity=0.283 Sum_probs=57.1
Q ss_pred eCCceeEEecCCcEEEEEEEeecCCC---eeEEEeCCEEecc------------------CcceEEEE---ecceEEEEE
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGNPLP---AVSWFKDNVEITT------------------NKRLKIQF---KKKRSTLII 70 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~p~p---~i~W~~~g~~l~~------------------~~~~~~~~---~~~~~~L~i 70 (176)
..+..+.+.+|++++|.|...+.+.. .+.|+|....... ..|..+.. ...+.+|.|
T Consensus 5 ~~p~~vtv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I 84 (123)
T 4gjt_B 5 ETSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLL 84 (123)
T ss_dssp ECCSEEECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEE
T ss_pred EcCCEEEEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEE
Confidence 34567889999999999998766543 4789985321100 01221111 023457999
Q ss_pred cccCCCCCEEEEEEEEcC--CCceEEEEEEEEEec
Q psy8425 71 TRIRSEDAGRYECRGTGV--HKDVVSAFAEVSINL 103 (176)
Q Consensus 71 ~~v~~~d~G~Y~C~a~n~--g~~~~s~~~~l~V~~ 103 (176)
.+++.+|+|.|.|.+.+. |..... +.|.|.+
T Consensus 85 ~~v~~~DsG~Y~C~v~t~~~g~~~~~--~~L~VlE 117 (123)
T 4gjt_B 85 RNAVQADEGEYECRVSTFPAGSFQAR--LRLRVLE 117 (123)
T ss_dssp ESCCSSSCSEEEEEEEESSSCEEEEE--EEEEC--
T ss_pred CCCChHHCEEEEEEEEECCCCeEEeE--EEEEEEE
Confidence 999999999999998764 444444 7888875
No 406
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.13 E-value=1.5e-09 Score=77.40 Aligned_cols=78 Identities=18% Similarity=0.302 Sum_probs=59.0
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeec--CCCeeEEEeCC--EE---ec--------------cCcceEEEEec--ceEE
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGN--PLPAVSWFKDN--VE---IT--------------TNKRLKIQFKK--KRST 67 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~--p~p~i~W~~~g--~~---l~--------------~~~~~~~~~~~--~~~~ 67 (176)
+.+...+..+.+.+|++++|.|.+.+. +.+.+.|+|+. .. +. ...|+.+.... ...+
T Consensus 2 ~~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 81 (242)
T 1hxm_B 2 GHLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTST 81 (242)
T ss_dssp CEEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEE
T ss_pred CccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEE
Confidence 456667788899999999999999875 56789999842 21 10 23455544322 4678
Q ss_pred EEEcccCCCCCEEEEEEEEcC
Q psy8425 68 LIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 68 L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
|.|.+++.+|+|.|.|.+.+.
T Consensus 82 L~I~~v~~~D~G~Y~C~~~~~ 102 (242)
T 1hxm_B 82 LTIHNVEKQDIATYYCALWEA 102 (242)
T ss_dssp EEECSCCGGGCEEEEEEEEEE
T ss_pred EEECCCCcccCEEEEEeeecC
Confidence 999999999999999999886
No 407
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=99.12 E-value=2.7e-10 Score=73.37 Aligned_cols=85 Identities=20% Similarity=0.269 Sum_probs=56.6
Q ss_pred eCCceeEEecCCcEEEEEEEeecCCC----eeEEEeC----------------CEEeccC----cceEEEEec-------
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGNPLP----AVSWFKD----------------NVEITTN----KRLKIQFKK------- 63 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~p~p----~i~W~~~----------------g~~l~~~----~~~~~~~~~------- 63 (176)
..+..+.+.+|++++|.|...+.+.+ .+.|++. +..+... .|..+....
T Consensus 7 ~~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~ 86 (128)
T 3r0n_A 7 QVLPEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDT 86 (128)
T ss_dssp ECCSEEECCTTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTC
T ss_pred ecCCeEEEEcCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEecccccccccc
Confidence 34556788999999999999876655 7899996 2222221 222221110
Q ss_pred ----ceEEEEEcccCCCCCEEEEEEEEcC--CCceEEEEEEEEE
Q psy8425 64 ----KRSTLIITRIRSEDAGRYECRGTGV--HKDVVSAFAEVSI 101 (176)
Q Consensus 64 ----~~~~L~i~~v~~~d~G~Y~C~a~n~--g~~~~s~~~~l~V 101 (176)
...+|.|.+++.+|+|.|.|.+.+. |..... +.|.|
T Consensus 87 ~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~--~~L~V 128 (128)
T 3r0n_A 87 EAELQDATLALHGLTVEDEGNYTCEFATFPKGSVRGM--TWLRV 128 (128)
T ss_dssp CCBCSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEE--EEEEC
T ss_pred ccCCCCeEEEEccCCchhCeEEEEEEEeCCCCCcccE--EEEEC
Confidence 1348999999999999999987764 444433 55543
No 408
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.12 E-value=1.9e-10 Score=81.94 Aligned_cols=98 Identities=12% Similarity=0.143 Sum_probs=57.7
Q ss_pred CccccCCCeEEeCCceeEEecCCcEEEEEEEee-cCCC-eeEEEeCCEEeccCc------c-eEEEEe-----cceEEEE
Q psy8425 4 GLRATIHPIEVSGLRNVSVKLRQSLRLVCRCKG-NPLP-AVSWFKDNVEITTNK------R-LKIQFK-----KKRSTLI 69 (176)
Q Consensus 4 ~l~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g-~p~p-~i~W~~~g~~l~~~~------~-~~~~~~-----~~~~~L~ 69 (176)
.|.|..+|.+...+.. .+..|+.+.|.|.+.| .|.| .+.|+++|..+.... . ...... ...+.|.
T Consensus 113 ~L~V~~~P~v~~~~~~-~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~ 191 (248)
T 3pv7_A 113 QLEVVASPASRLLLDQ-VGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLK 191 (248)
T ss_dssp EEEEEBCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEecCCceEEecCC-ccccCCCcEEEEEEccEECCCeEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEEE
Confidence 4566777876655443 3456778889999998 7998 999999986432210 0 001110 1235788
Q ss_pred EcccCCCCCEEEEEEEEcC-CCceEEEEEEEEEe
Q psy8425 70 ITRIRSEDAGRYECRGTGV-HKDVVSAFAEVSIN 102 (176)
Q Consensus 70 i~~v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~ 102 (176)
|.....+|.|.|+|.|.|. +....+..+.|.|.
T Consensus 192 i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V~ 225 (248)
T 3pv7_A 192 LNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTAA 225 (248)
T ss_dssp CC--CCCTTCEEEEEEECTTCSSCEEEEECC---
T ss_pred EcCccccCCCEEEEEEECCCCCCCcEEEEEEEEc
Confidence 8899999999999999999 65444433666663
No 409
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.12 E-value=1.3e-10 Score=83.58 Aligned_cols=86 Identities=12% Similarity=0.314 Sum_probs=61.6
Q ss_pred CCceeEEecCCcEEEEEEE---eecCCCeeEEEeC-CEEecc-----------------Ccce--EEEE----ecceEEE
Q psy8425 16 GLRNVSVKLRQSLRLVCRC---KGNPLPAVSWFKD-NVEITT-----------------NKRL--KIQF----KKKRSTL 68 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~---~g~p~p~i~W~~~-g~~l~~-----------------~~~~--~~~~----~~~~~~L 68 (176)
.+....+.+|+.+.|.|.+ .+.|.|.+.|+++ +..+.. ..++ ++.. .....+|
T Consensus 124 ~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 203 (268)
T 3mj6_A 124 EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSI 203 (268)
T ss_dssp CCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCE
T ss_pred CCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEE
Confidence 3556789999999999999 5678899999994 321111 0010 0111 0245689
Q ss_pred EEcccCCCCCEEEEEEEEcC-CCceEEEEEEEEEec
Q psy8425 69 IITRIRSEDAGRYECRGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 69 ~i~~v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~ 103 (176)
.|.+++.+|+|.|+|.|.|. +....+ +.|.|..
T Consensus 204 ~i~~v~~~D~G~Y~C~a~n~~g~~~~~--~~l~V~~ 237 (268)
T 3mj6_A 204 KLQTVKESDQGIYTCSIYVGKLESRKT--IVLHVVQ 237 (268)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEE--EEEEEEC
T ss_pred EECcCChhhCeEEEEEEEcCCceEEEE--EEEEEEc
Confidence 99999999999999999998 666656 8888854
No 410
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.12 E-value=8e-10 Score=86.13 Aligned_cols=66 Identities=17% Similarity=0.288 Sum_probs=46.8
Q ss_pred ecCCcEEEEEEEeec-CC-C-eeEEEeCCEEeccCcceEEE-Ee----cceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 23 KLRQSLRLVCRCKGN-PL-P-AVSWFKDNVEITTNKRLKIQ-FK----KKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 23 ~~G~~~~l~C~~~g~-p~-p-~i~W~~~g~~l~~~~~~~~~-~~----~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
.+|+.+.|.|.+.|. |. | .+.|++++..........+. .. ...+.|.|..+..+|.|.|+|.|.|.
T Consensus 139 ~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~ 212 (475)
T 1iga_A 139 QPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHY 212 (475)
T ss_pred CCCCeEEEEEEEeeecCCCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEEC
Confidence 689999999999987 65 5 99999988532210000000 00 11246889899889999999999998
No 411
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.12 E-value=9.5e-11 Score=82.17 Aligned_cols=99 Identities=14% Similarity=0.202 Sum_probs=66.3
Q ss_pred CCccccCCCeEEeCCceeEEecCCcE-EEEEEEe-ecCCCeeEEEeCCEEeccCcceEEE---EecceEEEEEcccCCCC
Q psy8425 3 KGLRATIHPIEVSGLRNVSVKLRQSL-RLVCRCK-GNPLPAVSWFKDNVEITTNKRLKIQ---FKKKRSTLIITRIRSED 77 (176)
Q Consensus 3 ~~l~v~~~p~~~~~~~~~~v~~G~~~-~l~C~~~-g~p~p~i~W~~~g~~l~~~~~~~~~---~~~~~~~L~i~~v~~~d 77 (176)
..|.|..+|.+...+.... .+|+.+ .|.|.+. +.|.|.+.|++++............ .....+.|.|..+..+|
T Consensus 109 ~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d 187 (221)
T 3eow_R 109 IWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVD 187 (221)
T ss_dssp CCCCCCCCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCC
T ss_pred EEEEEEECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCccceeecCCCCcEEEEEEEEEeCCHHHC
Confidence 3567778888764433333 678888 4999987 8899999999874332221100000 00234689999999999
Q ss_pred CEEEEEEEEcC-CCceEEEEEEEEEecCCC
Q psy8425 78 AGRYECRGTGV-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 78 ~G~Y~C~a~n~-g~~~~s~~~~l~V~~~p~ 106 (176)
.|.|+|.|.|. +... +.+.|...|.
T Consensus 188 ~g~ytC~a~n~~~~~~----~~~~v~~~~~ 213 (221)
T 3eow_R 188 GKQVTCKVEHESFEKP----QLLTVSLTVY 213 (221)
T ss_dssp CCCEEEEECCSCSSSC----EEEEECCCCC
T ss_pred CCeEEEEEECCCCCCC----eEEEEEEEEE
Confidence 99999999998 5544 5566666443
No 412
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.11 E-value=4.5e-09 Score=73.25 Aligned_cols=75 Identities=28% Similarity=0.419 Sum_probs=56.5
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--E---Eec-------cCcceEEEEe---cceEEEEEcccCCCC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--V---EIT-------TNKRLKIQFK---KKRSTLIITRIRSED 77 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~---~l~-------~~~~~~~~~~---~~~~~L~i~~v~~~d 77 (176)
+...+..+.+.+|++++|.|.+.+.+ +.+.|+|.. . .+. ...|+.+... ....+|.|.+++.+|
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D 82 (207)
T 1ypz_E 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLED 82 (207)
T ss_dssp EEESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGG
T ss_pred cEECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHH
Confidence 45567788999999999999998654 589999842 1 110 2345555433 345789999999999
Q ss_pred CEEEEEEEEcC
Q psy8425 78 AGRYECRGTGV 88 (176)
Q Consensus 78 ~G~Y~C~a~n~ 88 (176)
+|.|.|.+.+.
T Consensus 83 ~G~Y~C~~~~~ 93 (207)
T 1ypz_E 83 SGTYFCAADTW 93 (207)
T ss_dssp CEEEEEEEECB
T ss_pred CEEEEEEEecC
Confidence 99999999986
No 413
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.11 E-value=3.2e-10 Score=82.67 Aligned_cols=94 Identities=20% Similarity=0.282 Sum_probs=64.4
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEee-cC-CCeeEEEeC--CEEec------------cCcceEEEEecceEEEEEccc
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKG-NP-LPAVSWFKD--NVEIT------------TNKRLKIQFKKKRSTLIITRI 73 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g-~p-~p~i~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~i~~v 73 (176)
++.+...+. +.+.+|++++|.|.+.+ .+ .+.+.|+|. +..+. ...++.+.......+|.|.++
T Consensus 140 ~~~v~~~p~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 218 (280)
T 3fku_X 140 QPGLTQPPS-VSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGL 218 (280)
T ss_dssp CCSBBCCSE-EEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSC
T ss_pred eeEEEeCCc-EEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCC
Confidence 455555555 88999999999999987 44 378999982 22221 124555554456678999999
Q ss_pred CCCCCEEEEEEEEcCC-C-ceEEEEEEEEEecC
Q psy8425 74 RSEDAGRYECRGTGVH-K-DVVSAFAEVSINLR 104 (176)
Q Consensus 74 ~~~d~G~Y~C~a~n~g-~-~~~s~~~~l~V~~~ 104 (176)
+.+|+|.|.|.+.+.+ . ........|.|...
T Consensus 219 ~~~DsG~Y~C~~~~~~~~~~~~g~~t~l~V~~~ 251 (280)
T 3fku_X 219 QPEDEADYYCSTWDSSLSAVVFGGGTKLTVLGQ 251 (280)
T ss_dssp CGGGCSEEEEEEEETTTTEEEEBCCCEEEEC--
T ss_pred CHHHCEEEEEEEecCCCCceEECCCEEEEECCC
Confidence 9999999999999873 2 22222256777553
No 414
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.11 E-value=5.5e-10 Score=80.23 Aligned_cols=94 Identities=12% Similarity=0.185 Sum_probs=63.8
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--EEe---c------------cCcceEEEE-ecceEEEEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--VEI---T------------TNKRLKIQF-KKKRSTLII 70 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~~l---~------------~~~~~~~~~-~~~~~~L~i 70 (176)
.+|.+...+..+.+.+|++++|.|.+.+. .+.+.|+|.. ..+ . ...++.+.. .....+|.|
T Consensus 136 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I 214 (256)
T 3tf7_C 136 SEAAVTQSPRNKVTVTGENVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTL 214 (256)
T ss_dssp --CCEEESCSEEEEETTCCEEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEE
T ss_pred CccEEEecCCEEEEeCCCcEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEE
Confidence 36677888888889999999999999876 7799999832 111 0 012222221 134458999
Q ss_pred cccCCCCCEEEEEEEEcC-CCceEEEEEEEEEec
Q psy8425 71 TRIRSEDAGRYECRGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 71 ~~v~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~ 103 (176)
.+++.+|+|.|.|.|.|. |....-.-..|.|..
T Consensus 215 ~~v~~~DsG~Y~C~a~n~~g~~~fG~gt~l~v~~ 248 (256)
T 3tf7_C 215 ESASPSQTSLYFCASSDAPGQLYFGEGSKLTVLE 248 (256)
T ss_dssp SSCCGGGCEEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CCCCHHHCEEEEEEecCCCCccEECCCeEEEEEc
Confidence 999999999999999887 533322224566654
No 415
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=98.70 E-value=7.8e-12 Score=78.80 Aligned_cols=75 Identities=17% Similarity=0.349 Sum_probs=55.4
Q ss_pred EeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--EEe------------ccCcceEEEE--ecceEEEEEcccCCCC
Q psy8425 14 VSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--VEI------------TTNKRLKIQF--KKKRSTLIITRIRSED 77 (176)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~~l------------~~~~~~~~~~--~~~~~~L~i~~v~~~d 77 (176)
.+.+..+.+.+|++++|.|.+.+.+.+.+.|+|.. ..+ ....|+.+.. .....+|.|.+++.+|
T Consensus 3 ~Q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 82 (110)
T 1u3h_A 3 RQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGD 82 (110)
Confidence 34566788999999999999988777899999853 211 1123333332 1234689999999999
Q ss_pred CEEEEEEEEcC
Q psy8425 78 AGRYECRGTGV 88 (176)
Q Consensus 78 ~G~Y~C~a~n~ 88 (176)
+|.|.|.+.+.
T Consensus 83 sG~Y~C~~~~~ 93 (110)
T 1u3h_A 83 SATYFCAASAN 93 (110)
Confidence 99999999875
No 416
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.10 E-value=4.5e-10 Score=80.44 Aligned_cols=71 Identities=27% Similarity=0.365 Sum_probs=53.7
Q ss_pred ceeEEecCCcEEEEEEEeecC--CCeeEEEeC--CEEec-----------------cCcceEEEEe--cceEEEEEcccC
Q psy8425 18 RNVSVKLRQSLRLVCRCKGNP--LPAVSWFKD--NVEIT-----------------TNKRLKIQFK--KKRSTLIITRIR 74 (176)
Q Consensus 18 ~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i~~v~ 74 (176)
....+.+|++++|.|.+.+.+ .+.+.|+|+ +..+. ...++.+... ....+|.|.+++
T Consensus 142 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 221 (256)
T 3ux9_B 142 GGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLR 221 (256)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEEcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCC
Confidence 445689999999999998876 679999986 32221 1135555433 345679999999
Q ss_pred CCCCEEEEEEEEcC
Q psy8425 75 SEDAGRYECRGTGV 88 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~ 88 (176)
.+|+|.|.|.+.|.
T Consensus 222 ~~DsG~Y~C~~~~~ 235 (256)
T 3ux9_B 222 AEDTAVYYCARYID 235 (256)
T ss_dssp GGGCEEEEEEEEET
T ss_pred hhhCEEEEEEEEcC
Confidence 99999999999986
No 417
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.09 E-value=3.7e-11 Score=83.60 Aligned_cols=80 Identities=16% Similarity=0.123 Sum_probs=57.5
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecC--CCeeEEEeCCEEeccCcceEE-EEe-----cceEEEEEcccCCCCCEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDNVEITTNKRLKI-QFK-----KKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g~~l~~~~~~~~-~~~-----~~~~~L~i~~v~~~d~G~ 80 (176)
.+|.+...+....+.+|+.+.|.|.+.|.+ .+.+.|+++|..+........ ... .....|.|..+..+|+|.
T Consensus 110 ~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ 189 (211)
T 3tv3_L 110 AAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRS 189 (211)
T ss_dssp BCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSC
T ss_pred cCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCe
Confidence 567766555444455799999999999863 478999999998864211000 000 112579999999999999
Q ss_pred EEEEEEcC
Q psy8425 81 YECRGTGV 88 (176)
Q Consensus 81 Y~C~a~n~ 88 (176)
|+|.|.|.
T Consensus 190 Y~C~v~~~ 197 (211)
T 3tv3_L 190 YSCQVTHE 197 (211)
T ss_dssp EEEEEEET
T ss_pred EEEEEEEC
Confidence 99999998
No 418
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=99.09 E-value=1.7e-09 Score=69.45 Aligned_cols=77 Identities=21% Similarity=0.335 Sum_probs=56.9
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecC--CCeeEEEeC--CE---Eec---------cCcceEEEEecceEEEEEcccC
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKD--NV---EIT---------TNKRLKIQFKKKRSTLIITRIR 74 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~--g~---~l~---------~~~~~~~~~~~~~~~L~i~~v~ 74 (176)
|.+.+ +..+.+.+|++++|.|...+.+ ...+.|+|. +. .+. ...|+.+.......+|.|.+++
T Consensus 2 p~v~Q-p~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~l~ 80 (123)
T 3t0v_A 2 PVLTQ-SPSVSGTPGQKVTIFCSGSSSNVEDNSVYWYQQFPGTTPKVLIYNDDRRSSGVPDRFSGSKSGTSASLAISGLR 80 (123)
T ss_dssp CSBEE-CCCEEECTTCCEEEEEECCTTTTTTSCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCC
T ss_pred CccCc-cCeEEEcCCCCEEEEEecCCCccCCCeEEEEEECCCCCCEEEEEECCcCCCCCcCCEEEEccCCEEEEEECCCC
Confidence 44555 4578899999999999987654 367999983 21 111 1245555444567899999999
Q ss_pred CCCCEEEEEEEEcC
Q psy8425 75 SEDAGRYECRGTGV 88 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~ 88 (176)
.+|+|.|.|.+.+.
T Consensus 81 ~~DsG~Y~C~~~~~ 94 (123)
T 3t0v_A 81 SEDEADYYCLSWDD 94 (123)
T ss_dssp GGGCEEEEEEEEET
T ss_pred HHHCEEEEEEEEcC
Confidence 99999999999876
No 419
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=99.09 E-value=5.8e-10 Score=71.91 Aligned_cols=76 Identities=24% Similarity=0.360 Sum_probs=54.9
Q ss_pred EEeCCceeEEecCCcEEEEEEEeec-CCCeeEEEeCCE----EeccC-----cceEEEE-----ecceEEEEEcccCCCC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGN-PLPAVSWFKDNV----EITTN-----KRLKIQF-----KKKRSTLIITRIRSED 77 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~-p~p~i~W~~~g~----~l~~~-----~~~~~~~-----~~~~~~L~i~~v~~~d 77 (176)
+...+..+.+.+|++++|.|.+.+. +.+.+.|||++. .+... .++.... .....+|.|.+++.+|
T Consensus 6 v~q~p~~~~v~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D 85 (127)
T 2jju_A 6 VIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPAD 85 (127)
T ss_dssp EECCCSEEEEETTSCEEECCEESCCCSCCCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCGGG
T ss_pred EEeeCCeEEEeCCCCEEEEEEEeCCCCCCEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCHHH
Confidence 4455677889999999999999775 567899999652 11111 1332211 1235689999999999
Q ss_pred CEEEEEEEEcC
Q psy8425 78 AGRYECRGTGV 88 (176)
Q Consensus 78 ~G~Y~C~a~n~ 88 (176)
+|.|.|.+.+.
T Consensus 86 sG~Y~C~~~~~ 96 (127)
T 2jju_A 86 AGTYYCVKFRK 96 (127)
T ss_dssp CEEEEEEEEEC
T ss_pred CEEEEEEEEcC
Confidence 99999999886
No 420
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=99.09 E-value=4.6e-10 Score=70.38 Aligned_cols=73 Identities=15% Similarity=0.305 Sum_probs=51.7
Q ss_pred eeEEecCCcEEEEEEEeecCCC-----eeEEEeCCEE-e---ccC--------cce--EEEEecceEEEEEcccCCCCCE
Q psy8425 19 NVSVKLRQSLRLVCRCKGNPLP-----AVSWFKDNVE-I---TTN--------KRL--KIQFKKKRSTLIITRIRSEDAG 79 (176)
Q Consensus 19 ~~~v~~G~~~~l~C~~~g~p~p-----~i~W~~~g~~-l---~~~--------~~~--~~~~~~~~~~L~i~~v~~~d~G 79 (176)
.+.+.+|++++|.|...+.|.+ .+.|+|++.. + ..+ .++ ++.....+.+|.|.+++.+|+|
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~sL~I~~v~~~D~G 82 (110)
T 1ncn_A 3 KIQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDKG 82 (110)
T ss_dssp EEEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEETTTTEEEECSCCGGGCE
T ss_pred EEEEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEECCCEEEEEcCCChHHCE
Confidence 4678899999999998765544 3899997532 1 000 011 2222244578999999999999
Q ss_pred EEEEEEEcC-CCc
Q psy8425 80 RYECRGTGV-HKD 91 (176)
Q Consensus 80 ~Y~C~a~n~-g~~ 91 (176)
.|.|.+.+. +..
T Consensus 83 ~Y~C~v~~~~~~~ 95 (110)
T 1ncn_A 83 LYQCIIHHKKPTG 95 (110)
T ss_dssp EEEEEEEEECSSS
T ss_pred EEEEEEEcCCCCc
Confidence 999999987 544
No 421
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.09 E-value=1.3e-10 Score=81.13 Aligned_cols=80 Identities=20% Similarity=0.194 Sum_probs=54.9
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEee-cCCC-eeEEEeCCEEeccCcceEEEE--e-----cceEEEEEcccCCCCCE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKG-NPLP-AVSWFKDNVEITTNKRLKIQF--K-----KKRSTLIITRIRSEDAG 79 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g-~p~p-~i~W~~~g~~l~~~~~~~~~~--~-----~~~~~L~i~~v~~~d~G 79 (176)
.+|.+...+.......|+.+.|.|.+.| .|.| .+.|+|+|..+.......... . ...+.|.|..+..+|+|
T Consensus 113 ~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g 192 (216)
T 2xzc_L 113 AAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHK 192 (216)
T ss_dssp BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCC
T ss_pred CCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCC
Confidence 3566554332222346899999999998 4555 899999999886531111000 0 11247999999999999
Q ss_pred EEEEEEEcC
Q psy8425 80 RYECRGTGV 88 (176)
Q Consensus 80 ~Y~C~a~n~ 88 (176)
.|+|.|.|.
T Consensus 193 ~Y~C~a~n~ 201 (216)
T 2xzc_L 193 VYACEVTHQ 201 (216)
T ss_dssp EEEEEEECT
T ss_pred cEEEEEEcC
Confidence 999999998
No 422
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=99.09 E-value=5.8e-10 Score=70.68 Aligned_cols=76 Identities=21% Similarity=0.386 Sum_probs=56.2
Q ss_pred EEeCCceeEEecCCcEEEEEEEeec-CCCeeEEEeCC--E--E-ec------------cCcceEEEE--ecceEEEEEcc
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGN-PLPAVSWFKDN--V--E-IT------------TNKRLKIQF--KKKRSTLIITR 72 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~-p~p~i~W~~~g--~--~-l~------------~~~~~~~~~--~~~~~~L~i~~ 72 (176)
+...+..+.+.+|++++|.|.+... +.+.+.|+|.. . . +. ...|+.+.. .....+|+|.+
T Consensus 3 v~q~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 82 (116)
T 1tvd_A 3 VTQSSPDQTVASGSEVVLLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVISP 82 (116)
T ss_dssp EECCSCCEEEETTCCEEECCEEECCSSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEESS
T ss_pred eecCCCcEEEecCCeEEEEeEeEcCCCCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecCCCEEEEEEcc
Confidence 4556777889999999999998754 55689999842 1 1 11 134555543 23556899999
Q ss_pred cCCCCCEEEEEEEEcC
Q psy8425 73 IRSEDAGRYECRGTGV 88 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n~ 88 (176)
++.+|+|.|.|.+.+.
T Consensus 83 ~~~~DsG~Y~C~~~~~ 98 (116)
T 1tvd_A 83 VRTEDSATYYCAFTLP 98 (116)
T ss_dssp CCGGGCEEEEEEEECT
T ss_pred CChHHCEEEEEEEeCC
Confidence 9999999999999873
No 423
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=99.09 E-value=3.6e-10 Score=72.02 Aligned_cols=78 Identities=22% Similarity=0.302 Sum_probs=55.3
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeec-CCCeeEEEeCCE----Eecc-C----cceEEEE-----ecceEEEEEcccCC
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGN-PLPAVSWFKDNV----EITT-N----KRLKIQF-----KKKRSTLIITRIRS 75 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~p~i~W~~~g~----~l~~-~----~~~~~~~-----~~~~~~L~i~~v~~ 75 (176)
..+...+..+.+.+|++++|.|.+.+. +.+.+.|+|++. .+.. . .++.... .....+|.|.+++.
T Consensus 8 ~~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~ 87 (120)
T 2yz1_A 8 LKVTQPEKSVSVAAGDSTVLNCTLTSLLPVGPIKWYRGVGQSRLLIYSFTGEHFPRVTNVSDATKRNNMDFSIRISNVTP 87 (120)
T ss_dssp CCEECCSSEEEECTTCCEEECCEESCCCSCCCEEEEESSSTTCEEEEEECEECTTTCCSEEECCBSSTTBCCEEECSCCG
T ss_pred EEEECCCceEEEeCCCCEEEEeEECCCCCCcEEEEEcCCCCCcEEEEEcCCcccCcccceeeccccCCCeEEEEECCCCH
Confidence 345566778899999999999998765 567899999751 1111 0 1111111 02235799999999
Q ss_pred CCCEEEEEEEEcC
Q psy8425 76 EDAGRYECRGTGV 88 (176)
Q Consensus 76 ~d~G~Y~C~a~n~ 88 (176)
+|+|.|.|.+.+.
T Consensus 88 ~DsG~Y~C~~~~~ 100 (120)
T 2yz1_A 88 EDAGTYYCVKFQK 100 (120)
T ss_dssp GGCEEEEEEEEEC
T ss_pred HHCEEEEEEEEcC
Confidence 9999999999876
No 424
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.08 E-value=2.9e-10 Score=79.07 Aligned_cols=81 Identities=20% Similarity=0.223 Sum_probs=58.3
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEee-cCCCeeEEEeCCEEeccCcceEEEE-------ecceEEEEEcccCCCCCE
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKG-NPLPAVSWFKDNVEITTNKRLKIQF-------KKKRSTLIITRIRSEDAG 79 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g-~p~p~i~W~~~g~~l~~~~~~~~~~-------~~~~~~L~i~~v~~~d~G 79 (176)
..+|.+...+....+.+|+.++|.|.+.+ .|.|.+.|+++|..+.......... ....+.|.|..+..+|.|
T Consensus 112 ~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g 191 (213)
T 3nl4_L 112 PVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHK 191 (213)
T ss_dssp CBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCC
T ss_pred CcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCC
Confidence 34566554444444667999999999998 8989999999999886421000000 012367999999999999
Q ss_pred EEEEEEEcCC
Q psy8425 80 RYECRGTGVH 89 (176)
Q Consensus 80 ~Y~C~a~n~g 89 (176)
.|+|.|. .+
T Consensus 192 ~Y~C~a~-~g 200 (213)
T 3nl4_L 192 EYTCKVT-QG 200 (213)
T ss_dssp EEEEEEE-ET
T ss_pred eEEEEEE-eC
Confidence 9999999 55
No 425
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.08 E-value=1.5e-11 Score=85.71 Aligned_cols=80 Identities=18% Similarity=0.153 Sum_probs=57.4
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeec-CC-CeeEEEeCCEEeccCcceEEEE-e----cceEEEEEcccCCCCCEEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGN-PL-PAVSWFKDNVEITTNKRLKIQF-K----KKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~-p~i~W~~~g~~l~~~~~~~~~~-~----~~~~~L~i~~v~~~d~G~Y 81 (176)
.+|.+...+....+.+|+.+.|.|.+.|. |. +.+.|+++|..+.......... . ...+.|.|.++..+|+|.|
T Consensus 112 ~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y 191 (212)
T 1nfd_E 112 SSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRV 191 (212)
T ss_dssp BCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCE
T ss_pred CCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeE
Confidence 45666544443445679999999999987 54 7999999999886532110000 0 1135699999999999999
Q ss_pred EEEEEcC
Q psy8425 82 ECRGTGV 88 (176)
Q Consensus 82 ~C~a~n~ 88 (176)
+|.|.|.
T Consensus 192 ~C~a~n~ 198 (212)
T 1nfd_E 192 SCQVTHE 198 (212)
T ss_dssp EEEEECT
T ss_pred EEEEEeC
Confidence 9999998
No 426
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=99.08 E-value=1.5e-09 Score=69.52 Aligned_cols=75 Identities=19% Similarity=0.386 Sum_probs=55.9
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecC--CCeeEEEeCC--E----EeccCcceEEEEe--cceEEEEEcccCCCCCEEEE
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDN--V----EITTNKRLKIQFK--KKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g--~----~l~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~ 82 (176)
+.+.+..+.+.+|++++|.|.+.+.. .+.+.|+|.. . .+....++.+... ....+|.|.+++.+|+|.|.
T Consensus 3 v~Q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~Y~ 82 (121)
T 2i24_N 3 VDQTPQRITKETGESLTINCVVRDSRCVLSTGYWYRKPPGSRNEESISDGGRYVETVNRGSKSFSLRINDLTVKDSGTYR 82 (121)
T ss_dssp EEEECSEEEEETTCCEEEEEEECSCCCCEEEEEEEEECTTCSCCEEECSBTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred cEECCcEEEEecCCcEEEEeEccCCCCCCCEEEEEEeCCCCCceeeEecCCCeEEEecCCCCEEEEEECCCChhhCEEEE
Confidence 45567778999999999999987653 4579999843 2 1223355554432 45678999999999999999
Q ss_pred EEEEc
Q psy8425 83 CRGTG 87 (176)
Q Consensus 83 C~a~n 87 (176)
|.+..
T Consensus 83 C~~~~ 87 (121)
T 2i24_N 83 CKPES 87 (121)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99874
No 427
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.07 E-value=1.2e-10 Score=79.32 Aligned_cols=60 Identities=5% Similarity=0.154 Sum_probs=48.7
Q ss_pred cCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CCceEE
Q psy8425 24 LRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HKDVVS 94 (176)
Q Consensus 24 ~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~s 94 (176)
.+..+.|.|.+.|.|.|.+.|+++|..+....+ +.|..+..+|+|.|+|.|.|. |.....
T Consensus 109 ~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~-----------~~i~~~~~~d~G~Y~C~a~N~~g~~~~~ 169 (176)
T 1hng_A 109 ECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESEM 169 (176)
T ss_dssp ETTTTEEEEECSSCSSCEEEEEETTEEEEEESS-----------SEEEEECSCCSSCEEEEEEETTEEEEEE
T ss_pred cCCcEEEEEEecCCCCcEEEEEECCEECCCCCc-----------EEEEEEEccCCeEEEEEEEecCCCceec
Confidence 355799999999999999999999988865332 344477899999999999999 665554
No 428
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.07 E-value=1.6e-10 Score=81.12 Aligned_cols=81 Identities=14% Similarity=0.210 Sum_probs=55.9
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeec-CCC-eeEEEeCCEEeccCcceEEEEe----cceEEEEEcccCCCCCEEEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGN-PLP-AVSWFKDNVEITTNKRLKIQFK----KKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~p-~i~W~~~g~~l~~~~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C 83 (176)
+|.+...+....+.+|+.+.|.|.+.|. |.| .+.|+++|..+... ....... ...+.|.|.++..+| |.|+|
T Consensus 127 ~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~-~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C 204 (222)
T 1q9r_B 127 PPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVH-TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTC 204 (222)
T ss_dssp CCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEE-EEEEEEETTEEEEEEEEEEETTTTTT-SCCEE
T ss_pred CCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEecCCeEcceE-eccccccCCcEEEEEEEEECchhcCC-CeEEE
Confidence 4555433323335689999999999986 888 99999998765331 1111100 123578999999889 99999
Q ss_pred EEEcC-CCce
Q psy8425 84 RGTGV-HKDV 92 (176)
Q Consensus 84 ~a~n~-g~~~ 92 (176)
.|.|. +...
T Consensus 205 ~a~n~~~~~~ 214 (222)
T 1q9r_B 205 NVAHPASSTK 214 (222)
T ss_dssp EEEEGGGTEE
T ss_pred EEEccCCCCc
Confidence 99998 5543
No 429
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.07 E-value=9e-10 Score=78.44 Aligned_cols=74 Identities=22% Similarity=0.301 Sum_probs=53.8
Q ss_pred eCCceeEEecCCcEEEEEEEeecC--CCeeEEEeC--CEEec----------------cCcceEEEEe--cceEEEEEcc
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKD--NVEIT----------------TNKRLKIQFK--KKRSTLIITR 72 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~--g~~l~----------------~~~~~~~~~~--~~~~~L~i~~ 72 (176)
..+....+.+|++++|.|.+.+.| .+.+.|+|+ +..+. ...++.+... ....+|.|.+
T Consensus 127 ~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 206 (242)
T 2znx_A 127 QESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNS 206 (242)
T ss_dssp EEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECS
T ss_pred ecCCcceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECC
Confidence 333345689999999999999876 478999984 32221 1234444332 2456899999
Q ss_pred cCCCCCEEEEEEEEcC
Q psy8425 73 IRSEDAGRYECRGTGV 88 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n~ 88 (176)
++.+|+|.|.|.|.|.
T Consensus 207 v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 207 VTTEDTATYYCANXDG 222 (242)
T ss_dssp CCGGGCEEEEEEETTS
T ss_pred CCcCcCEEEEEeccCC
Confidence 9999999999999984
No 430
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.07 E-value=2.6e-09 Score=78.50 Aligned_cols=89 Identities=17% Similarity=0.209 Sum_probs=65.3
Q ss_pred eCCceeEEecCCcEEEEEEEeec-------CCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGN-------PLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~-------p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
..|++..+..|+++.|.|.+.+. |.|.+.|+++|..+... ++.+. ....+.|.|.++...| |.|+|.|.+
T Consensus 9 i~P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~-~~~~~-~~~~~~L~i~~~~~~~-g~Y~C~a~~ 85 (303)
T 1i1r_A 9 ISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE-QYTII-NRTASSVTFTDIASLN-IQLTCNILT 85 (303)
T ss_dssp EESSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGG-GCEEE-ETTEEEEEECSCCCSE-EEEEEEEEE
T ss_pred EccCCceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChh-heeee-CCcEEEEEEcCcCCCc-eEEEEeccc
Confidence 34667889999999999999864 77899999999988653 44432 2445789999999874 999999988
Q ss_pred CCCceE-EEEEEEEEecCCC
Q psy8425 88 VHKDVV-SAFAEVSINLRPD 106 (176)
Q Consensus 88 ~g~~~~-s~~~~l~V~~~p~ 106 (176)
.|.... ...+.|.+..+|.
T Consensus 86 ~g~~~~~~~~~~l~v~~~P~ 105 (303)
T 1i1r_A 86 FGQLEQNVYGITIISGLPPE 105 (303)
T ss_dssp TTTEEEEEEEEEEEEECCCC
T ss_pred CCCcceEEEEEEEeccCCCC
Confidence 643221 2125566666665
No 431
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.07 E-value=1.3e-09 Score=79.18 Aligned_cols=79 Identities=19% Similarity=0.302 Sum_probs=60.7
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--EE---e----------c----cCcceEEEEe-cceEEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--VE---I----------T----TNKRLKIQFK-KKRSTLI 69 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~~---l----------~----~~~~~~~~~~-~~~~~L~ 69 (176)
.+.+...+..+.+.+|++++|.|.+.+.+.+.+.|+|++ .. + . ...|+.+... ....+|.
T Consensus 24 ~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (279)
T 2wbj_D 24 GAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 103 (279)
T ss_dssp CCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEE
T ss_pred cceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEE
Confidence 456777788899999999999999988888899999853 11 1 0 1234544432 3456899
Q ss_pred EcccCCCCCEEEEEEEEcC
Q psy8425 70 ITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 70 i~~v~~~d~G~Y~C~a~n~ 88 (176)
|.+++.+|+|.|.|.+.|.
T Consensus 104 I~~v~~~D~G~Y~C~~~~~ 122 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDL 122 (279)
T ss_dssp ESSCCGGGCEEEEEEEEET
T ss_pred EccCCccCCEEEEEEEccc
Confidence 9999999999999999984
No 432
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=99.07 E-value=4.9e-10 Score=70.90 Aligned_cols=87 Identities=14% Similarity=0.108 Sum_probs=56.0
Q ss_pred CCceeEEecCCcEEEEEEEeec--CCCeeEEEeCC-------EEe-c---------cCcceEEEE--ecceEEEEEcccC
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKGN--PLPAVSWFKDN-------VEI-T---------TNKRLKIQF--KKKRSTLIITRIR 74 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g~--p~p~i~W~~~g-------~~l-~---------~~~~~~~~~--~~~~~~L~i~~v~ 74 (176)
.+..+.+.+|++++|.|..... ....+.|+|.. ..+ . ...++.+.. .....+|.|.+++
T Consensus 3 sp~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 82 (115)
T 2or7_A 3 SHTAVQGLAGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTV 82 (115)
T ss_dssp ---CEEEETTSCEEECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCC
T ss_pred CccEEEEEcCCCEEEEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCC
Confidence 3566789999999999998653 34579999964 111 1 112332211 1234689999999
Q ss_pred CCCCEEEEEEEEcCCCceEEEEEEEEEec
Q psy8425 75 SEDAGRYECRGTGVHKDVVSAFAEVSINL 103 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~g~~~~s~~~~l~V~~ 103 (176)
.+|+|.|.|.+.+.+... ...+.|.|..
T Consensus 83 ~~DsG~Y~C~v~~~~~~~-~~~v~L~V~~ 110 (115)
T 2or7_A 83 VGDGGPYCCVVEIPGAFH-FVDYMLEVKP 110 (115)
T ss_dssp GGGCEEEEEEECCTTSCE-EEEEEEEEES
T ss_pred HHHCEEEEEEEECCCcee-EEEEEEEEcC
Confidence 999999999998873222 3226666654
No 433
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=99.07 E-value=2.9e-09 Score=67.39 Aligned_cols=87 Identities=18% Similarity=0.317 Sum_probs=57.1
Q ss_pred CceeEEecCCcEEEEEEEeec---CCCeeEEEeCC--E---Ee-c------------cCcceEEEEec--ceEEEEEccc
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGN---PLPAVSWFKDN--V---EI-T------------TNKRLKIQFKK--KRSTLIITRI 73 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~---p~p~i~W~~~g--~---~l-~------------~~~~~~~~~~~--~~~~L~i~~v 73 (176)
+..+.+.+|++++|.|..... +...+.|+|.. . .+ . ...|+.+.... ...+|.|.++
T Consensus 5 ~~~~~~~~G~~v~L~C~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~ 84 (116)
T 3bj9_1 5 PPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISEL 84 (116)
T ss_dssp CSEEEEETTCCEEEEEEECSSSCGGGCCEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSC
T ss_pred CCcEEEcCCCcEEEEEEeecCccCCCceEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEecCCCceEEEEECCC
Confidence 345789999999999998754 45689999832 1 11 1 02344444332 2448999999
Q ss_pred CCCCCEEEEEEEEcCCCceEEEEEEEEEec
Q psy8425 74 RSEDAGRYECRGTGVHKDVVSAFAEVSINL 103 (176)
Q Consensus 74 ~~~d~G~Y~C~a~n~g~~~~s~~~~l~V~~ 103 (176)
+.+|+|.|.|.+.+.+......-..|.|..
T Consensus 85 ~~~DsG~Y~C~~~~~~~~~fg~gT~L~V~~ 114 (116)
T 3bj9_1 85 QPEDEAMYYCAMGARSTHVFGSGTQLTVLS 114 (116)
T ss_dssp CGGGCEEEEEEECCSSCCEECCCEEEEEES
T ss_pred ChhHCEEEEEEEeCCCCcEECCCEEEEEec
Confidence 999999999999876322111114566653
No 434
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.07 E-value=1.7e-10 Score=81.49 Aligned_cols=94 Identities=14% Similarity=0.138 Sum_probs=55.3
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeec-CCC-eeEEEeCCEEeccC--cceEE-EEecceEEEEEcccCCCCCEEEEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGN-PLP-AVSWFKDNVEITTN--KRLKI-QFKKKRSTLIITRIRSEDAGRYECR 84 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~p-~i~W~~~g~~l~~~--~~~~~-~~~~~~~~L~i~~v~~~d~G~Y~C~ 84 (176)
+|.+........+.+|+.++|.|.+.|. |.| .+.|++++..+... ..... ......+.|.|..+..+| |.|+|.
T Consensus 121 ~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~ 199 (227)
T 1mju_H 121 APSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCN 199 (227)
T ss_dssp CCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEE
T ss_pred CCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEE
Confidence 4554432222346789999999999986 777 99999998764211 11000 000124579999988878 999999
Q ss_pred EEcC-CCceEEEEEEEEEecCCC
Q psy8425 85 GTGV-HKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 85 a~n~-g~~~~s~~~~l~V~~~p~ 106 (176)
|.|. +..... +.+.+.++|.
T Consensus 200 a~n~~~~~~~~--~~~~~~~~p~ 220 (227)
T 1mju_H 200 VAHPASSTKVD--KKIEPRGPTI 220 (227)
T ss_dssp EEEGGGTEEEE--EECCCCCC--
T ss_pred EEECCCCcceE--EEeCCCCCCC
Confidence 9998 444444 5555555554
No 435
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.06 E-value=8.5e-10 Score=78.14 Aligned_cols=75 Identities=21% Similarity=0.364 Sum_probs=55.5
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCC--CeeEEEeC--CEEec-----------------cCcceEEEEe--cceEEEE
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPL--PAVSWFKD--NVEIT-----------------TNKRLKIQFK--KKRSTLI 69 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~--p~i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~ 69 (176)
+...+....+.+|++++|.|.+.+.|. +.+.|+|+ +..+. ...++.+... ....+|.
T Consensus 122 ~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 201 (240)
T 1moe_A 122 QLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQ 201 (240)
T ss_dssp EEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred EEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEE
Confidence 455566778999999999999998874 58999995 22210 1234444332 3446899
Q ss_pred EcccCCCCCEEEEEEEEc
Q psy8425 70 ITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 70 i~~v~~~d~G~Y~C~a~n 87 (176)
|.+++.+|+|.|.|.|.+
T Consensus 202 I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 202 LTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp ECSCCGGGCEEEEEEECS
T ss_pred ECcCCHHHCEEEEEEEEe
Confidence 999999999999999984
No 436
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.06 E-value=1.8e-10 Score=80.33 Aligned_cols=80 Identities=18% Similarity=0.148 Sum_probs=53.8
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEee-cCCC-eeEEEeCCEEeccCcceEE-EE-e---cceEEEEEcccCCCCCEEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKG-NPLP-AVSWFKDNVEITTNKRLKI-QF-K---KKRSTLIITRIRSEDAGRY 81 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g-~p~p-~i~W~~~g~~l~~~~~~~~-~~-~---~~~~~L~i~~v~~~d~G~Y 81 (176)
.+|.+...+....+..|+.+.|.|.+.+ .|.| .+.|+++|..+........ .. . ...+.|.|.....+|+|.|
T Consensus 120 ~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y 199 (218)
T 3s96_B 120 STPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSF 199 (218)
T ss_dssp BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCE
T ss_pred CCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeE
Confidence 4566654444444567899999999998 5667 8999999998865211100 00 0 1124588888888899999
Q ss_pred EEEEEcC
Q psy8425 82 ECRGTGV 88 (176)
Q Consensus 82 ~C~a~n~ 88 (176)
+|.|.|.
T Consensus 200 ~C~a~n~ 206 (218)
T 3s96_B 200 TCQVTHE 206 (218)
T ss_dssp EEEEEET
T ss_pred EEEEEeC
Confidence 9999998
No 437
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=99.06 E-value=7.3e-10 Score=71.80 Aligned_cols=93 Identities=20% Similarity=0.242 Sum_probs=61.4
Q ss_pred eEEeCCceeEEecCCcEEEEEEEee-------cCCCeeEEEeCCEE------ecc-----------CcceEEEEe--cce
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKG-------NPLPAVSWFKDNVE------ITT-----------NKRLKIQFK--KKR 65 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g-------~p~p~i~W~~~g~~------l~~-----------~~~~~~~~~--~~~ 65 (176)
..+..+..+.+.+|++++|.|.... ...+.+.|++.... +.. ..|+.+... ...
T Consensus 8 ~~~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~~~~~ 87 (132)
T 1nko_A 8 YSLTMQSSVTVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKN 87 (132)
T ss_dssp CEEEECSEEEEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCGGGTB
T ss_pred eEEeCCCEEEEcCCCeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCCCCCc
Confidence 3455577889999999999999873 34568999996431 211 133333211 234
Q ss_pred EEEEEcccCCCCCEEEEEEEEcCCC---c-eEEEEEEEEEecCCC
Q psy8425 66 STLIITRIRSEDAGRYECRGTGVHK---D-VVSAFAEVSINLRPD 106 (176)
Q Consensus 66 ~~L~i~~v~~~d~G~Y~C~a~n~g~---~-~~s~~~~l~V~~~p~ 106 (176)
.+|.|.+++.+|+|.|.|.+.+... . ... +.|.|...|.
T Consensus 88 ~sL~I~~v~~~DsG~Y~C~v~~~~~~~~~~~~~--~~l~V~~~~~ 130 (132)
T 1nko_A 88 CTLSIRDARMSDAGRYFFRMEKGNIKWNYKYDQ--LSVNVTALTH 130 (132)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTEEEECTTSC--EEEEEECCC-
T ss_pred eEEEEcccCcccCeeEEEEEEcCCCcccccCCc--eEEEecccCC
Confidence 5899999999999999999987531 1 123 6777776543
No 438
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.06 E-value=1.3e-09 Score=75.18 Aligned_cols=70 Identities=13% Similarity=0.219 Sum_probs=49.3
Q ss_pred ecCCcEEEEEEEe-ecCCCeeEEEeCCEEeccCcceEEEEecceE---EEEEcccCCCCCEEEEEEEEcC-CCceE
Q psy8425 23 KLRQSLRLVCRCK-GNPLPAVSWFKDNVEITTNKRLKIQFKKKRS---TLIITRIRSEDAGRYECRGTGV-HKDVV 93 (176)
Q Consensus 23 ~~G~~~~l~C~~~-g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~n~-g~~~~ 93 (176)
..|+.+.|.|.+. |.|.|.+.|+++|..+..... ......... ...+..+..+|.|.|+|.|.|. +....
T Consensus 119 ~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~-~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~ 193 (201)
T 1dr9_A 119 PTSNIRRIICSTSGGFPEPHLSWLENGEELNAINT-TVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQ 193 (201)
T ss_dssp SSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEE-EEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEE
T ss_pred CCCCeEEEEEecCCccCCCEEEEEECCEECccccc-eEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeee
Confidence 4588999999995 999999999999998875422 222211111 1123455668999999999998 65443
No 439
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=99.06 E-value=1.8e-09 Score=68.08 Aligned_cols=75 Identities=15% Similarity=0.158 Sum_probs=54.3
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeC--CE---Eec---c----------CcceEEEEecceEEEEEcccC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKD--NV---EIT---T----------NKRLKIQFKKKRSTLIITRIR 74 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~--g~---~l~---~----------~~~~~~~~~~~~~~L~i~~v~ 74 (176)
+...+..+.+.+|++++|.|...+.+.+.+.|+|. +. .+. . ..|+.+...... +|.|.+++
T Consensus 4 v~q~p~~~~v~~G~~vtL~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~-~L~I~~~~ 82 (112)
T 1fo0_B 4 LEQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDT-ELRLQVAN 82 (112)
T ss_dssp EEEECSEEECCTTCCEEEEEEESCTTCCEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEETT-EEEEEEES
T ss_pred EEeCCCeEEEecCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcCCCC-eEEEcCCC
Confidence 44557778899999999999987667778999983 21 111 0 033333332333 89999999
Q ss_pred CCCCEEEEEEEEcC
Q psy8425 75 SEDAGRYECRGTGV 88 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~ 88 (176)
.+|+|.|.|.+.+.
T Consensus 83 ~~Dsg~Y~C~~~~~ 96 (112)
T 1fo0_B 83 MSQGRTLYCTCSAD 96 (112)
T ss_dssp CCSCEEEEEEEESS
T ss_pred HhHCEEEEEEEEcC
Confidence 99999999998864
No 440
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=99.06 E-value=4.5e-10 Score=70.71 Aligned_cols=73 Identities=18% Similarity=0.385 Sum_probs=54.6
Q ss_pred CCceeEEecCCcEEEEEEEe-ecCCCeeEEEeC--CE---Eec-----c----------CcceEEEEecceEEEEEcccC
Q psy8425 16 GLRNVSVKLRQSLRLVCRCK-GNPLPAVSWFKD--NV---EIT-----T----------NKRLKIQFKKKRSTLIITRIR 74 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~-g~p~p~i~W~~~--g~---~l~-----~----------~~~~~~~~~~~~~~L~i~~v~ 74 (176)
.+..+.+.+|++++|.|.+. +.+.+.+.|+|. +. .+. . ..|+.+.......+|.|.+++
T Consensus 5 ~p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~~ 84 (111)
T 2qhl_A 5 ELHVKTVKRGENVTMECSMSKVKDKDKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVNDQKFDLNIIGTR 84 (111)
T ss_dssp BCEEEECCTTCCEEECCBCTTCSCGGGEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESSSBEEEEESSCC
T ss_pred CCceEEEeCCCCEEEEEEccCCcccceEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEEcCCeEEEEECCCC
Confidence 45567899999999999987 766678999983 21 111 0 245555443455689999999
Q ss_pred CCCCEEEEEEEEcC
Q psy8425 75 SEDAGRYECRGTGV 88 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~ 88 (176)
.+|+|.|.|.+.+.
T Consensus 85 ~~DsG~Y~C~~~~~ 98 (111)
T 2qhl_A 85 EDDGGEYFCGEVEG 98 (111)
T ss_dssp GGGCEEEEEEEEET
T ss_pred hhHCEEEEEEEccC
Confidence 99999999999875
No 441
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.05 E-value=2.8e-10 Score=79.20 Aligned_cols=81 Identities=19% Similarity=0.123 Sum_probs=56.3
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCC--eeEEEeCCEEeccCcceE-EEEe-----cceEEEEEcccCCCCCEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLP--AVSWFKDNVEITTNKRLK-IQFK-----KKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p--~i~W~~~g~~l~~~~~~~-~~~~-----~~~~~L~i~~v~~~d~G~ 80 (176)
.+|.+...+....+..|+.+.|.|.+.|.+++ .+.|+|+|..+..+.... .... ...+.|.|..+..+|+|.
T Consensus 114 ~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ 193 (212)
T 1q0x_L 114 SSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSS 193 (212)
T ss_dssp BCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCE
T ss_pred CCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCc
Confidence 45665543333334578999999999986543 899999999886532110 0110 123578999999999999
Q ss_pred EEEEEEcCC
Q psy8425 81 YECRGTGVH 89 (176)
Q Consensus 81 Y~C~a~n~g 89 (176)
|+|.|.|.+
T Consensus 194 Y~C~a~n~~ 202 (212)
T 1q0x_L 194 YSCQVTHEG 202 (212)
T ss_dssp EEEEEEETT
T ss_pred EEEEEEeCC
Confidence 999999983
No 442
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.05 E-value=1e-09 Score=78.24 Aligned_cols=74 Identities=15% Similarity=0.304 Sum_probs=54.1
Q ss_pred eCCceeEEecCCcEEEEEEEeecC--CCeeEEEeCC--EEec-----------------cCcceEEEEe--cceEEEEEc
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDN--VEIT-----------------TNKRLKIQFK--KKRSTLIIT 71 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g--~~l~-----------------~~~~~~~~~~--~~~~~L~i~ 71 (176)
..+....+.+|++++|.|.+.+.+ .+.+.|+|++ ..+. ...++.+... ....+|.|.
T Consensus 132 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 211 (247)
T 1svz_A 132 QQSGPELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQIN 211 (247)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEEC
T ss_pred eCCCceeecCCCcEEEEEEEcCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEEC
Confidence 333445689999999999998874 5689999953 2110 1244444432 345789999
Q ss_pred ccCCCCCEEEEEEEEcC
Q psy8425 72 RIRSEDAGRYECRGTGV 88 (176)
Q Consensus 72 ~v~~~d~G~Y~C~a~n~ 88 (176)
+++.+|+|.|.|.+.|.
T Consensus 212 ~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 212 NLKNEDTATYFCVRDRH 228 (247)
T ss_dssp SCCGGGCEEEEEEEEEG
T ss_pred CCChhHCEEEEEEEecc
Confidence 99999999999999985
No 443
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=99.05 E-value=3.1e-09 Score=69.34 Aligned_cols=92 Identities=15% Similarity=0.215 Sum_probs=61.3
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeecC---CCeeEEEeCC--E---Eec---------cCcceEEEEecceEEEEEcccC
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGNP---LPAVSWFKDN--V---EIT---------TNKRLKIQFKKKRSTLIITRIR 74 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~p---~p~i~W~~~g--~---~l~---------~~~~~~~~~~~~~~~L~i~~v~ 74 (176)
.+.+++ .+.+.+|++++|.|.....+ .+.+.|||.. . .+. ...|+.+.......+|.|.+++
T Consensus 8 ~v~q~~-~v~v~~G~~vtL~C~~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~~~~~~sL~I~~v~ 86 (135)
T 1p4b_L 8 VVTQES-ALTTSPGETVTLTCRSSTGAVTTSNYASWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQ 86 (135)
T ss_dssp CEECCS-EEEECTTCEEEEEEEETTSSCCGGGCCEEEEEEGGGEEEEEEETTTEECTTCCTTEEEEEETTEEEEEEESCC
T ss_pred eEEECC-cEEEcCCCCEEEEEEecCCCcCCCCEEEEEEECCCCCCEEEEEeCCccCCCCCCCEEEEcCCCEEEEEECCCC
Confidence 344444 48899999999999987664 4679999842 1 111 1245555444556789999999
Q ss_pred CCCCEEEEEEEEcCCCceEEEEEEEEEecC
Q psy8425 75 SEDAGRYECRGTGVHKDVVSAFAEVSINLR 104 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~g~~~~s~~~~l~V~~~ 104 (176)
.+|+|.|.|.+.+........-..|.|...
T Consensus 87 ~~DsG~Y~C~~~~~~~~~fg~GT~L~V~~~ 116 (135)
T 1p4b_L 87 TEDEAIYFCALWYSNHWVFGGGTKLTVLGG 116 (135)
T ss_dssp GGGCEEEEEEEECSSCEEECCCEEEEEC--
T ss_pred hhHCEEEEEEEecCCCCEECCCEEEEEEcC
Confidence 999999999998763211111256777653
No 444
>3kgr_A LAIR-1, hlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, cell membrane, glycoprotein; 1.80A {Homo sapiens} PDB: 3rp1_A
Probab=99.05 E-value=1.2e-09 Score=68.29 Aligned_cols=94 Identities=13% Similarity=0.160 Sum_probs=64.1
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEecc--CcceEEEEecceEEEEEcccCCCCCEEEEEEE
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITT--NKRLKIQFKKKRSTLIITRIRSEDAGRYECRG 85 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~--~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 85 (176)
..+|.+...+.. .+..|++|+|.|..... ...+.|+|+|..+.. ..............+.|..++.+|+|.|+|..
T Consensus 7 ~pkPsL~a~P~~-vv~~G~~VtL~C~~~~~-~~~f~l~k~g~~~~~~~~~~~~~~~~~~~~~f~i~~vt~~~aG~Y~C~~ 84 (106)
T 3kgr_A 7 LPRPSISAEPGT-VIPLGSHVTFVCRGPVG-VQTFRLERESRSTYNDTEDVSQASPSESEARFRIDSVSEGNAGPYRCIY 84 (106)
T ss_dssp CCCCEEEEESCS-EEETTCCEEEEEEECTT-CCEEEEEEGGGTEEEEECCCEEEETTEEEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEEeCCC-ccCCCCeEEEEEEccCC-CcEEEEEECCCccccccccccccCCCCcceEEEecCCCcCCCceEEEEe
Confidence 456777666655 68899999999997643 347889998865421 01111100123568999999999999999999
Q ss_pred EcC-CCceEEEEEEEEEec
Q psy8425 86 TGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 86 ~n~-g~~~~s~~~~l~V~~ 103 (176)
.+. .....+.++.|.|..
T Consensus 85 ~~~~~~S~~Sdpl~L~Vtg 103 (106)
T 3kgr_A 85 YKPPKWSEQSDYLELLVKE 103 (106)
T ss_dssp EETTEECCCCCCEEEEEEC
T ss_pred eCCCcccCCCCCEEEEEeC
Confidence 886 444445557777764
No 445
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.04 E-value=2e-09 Score=77.35 Aligned_cols=73 Identities=21% Similarity=0.289 Sum_probs=56.1
Q ss_pred eEEeCCceeEEecCCcEEEEEEEee-cCC---CeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEc
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKG-NPL---PAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTG 87 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g-~p~---p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 87 (176)
.+...|....+..|+.++|.|.+.| .|. ..++|+|||.++.. ....|.+..+...|+|.|+|.+.+
T Consensus 4 tVs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsG----------aT~tLti~s~t~sdSG~YqCvVTD 73 (304)
T 3shs_A 4 TVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHEN----------NTATLTVADATSENAGSYKVTVQD 73 (304)
T ss_dssp EEEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSC----------CSSEEEESSCCGGGCEEEEEEEEE
T ss_pred EEEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccC----------CcceEEeeeccccCCeEEEEEEEE
Confidence 3444566667889999999999765 452 37999999988664 234789999999999999999999
Q ss_pred C-CCceEE
Q psy8425 88 V-HKDVVS 94 (176)
Q Consensus 88 ~-g~~~~s 94 (176)
. +....+
T Consensus 74 a~Gcs~tS 81 (304)
T 3shs_A 74 TDTMTSVE 81 (304)
T ss_dssp TTTCCEEE
T ss_pred CCCCeeee
Confidence 8 554433
No 446
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=99.04 E-value=6.4e-09 Score=66.00 Aligned_cols=90 Identities=18% Similarity=0.180 Sum_probs=61.4
Q ss_pred EeCCceeEEecCCcEEEEEEEeecC-CCeeEEEeC--CE--E-e----------ccCcceEEEE--ecceEEEEEcccCC
Q psy8425 14 VSGLRNVSVKLRQSLRLVCRCKGNP-LPAVSWFKD--NV--E-I----------TTNKRLKIQF--KKKRSTLIITRIRS 75 (176)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~~~g~p-~p~i~W~~~--g~--~-l----------~~~~~~~~~~--~~~~~~L~i~~v~~ 75 (176)
.+.+..+.+.+|++++|.|...+.. ...+.|+|. +. . + ....|+.+.. .....+|.|.+++.
T Consensus 3 ~q~p~~~~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~ 82 (117)
T 3bp6_A 3 TFYPAWLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRR 82 (117)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEESSCCG
T ss_pred eecCCcEEEeCCCCEEEEeEeecCCCCCEEEEEEeCCCCCceEEEEECCCCccccccCcEEEEEcCCCCEEEEEECcCCH
Confidence 4556778899999999999987654 468999983 21 1 1 1124555543 24456899999999
Q ss_pred CCCEEEEEEEEcC-CCc--eEEEEEEEEEec
Q psy8425 76 EDAGRYECRGTGV-HKD--VVSAFAEVSINL 103 (176)
Q Consensus 76 ~d~G~Y~C~a~n~-g~~--~~s~~~~l~V~~ 103 (176)
+|+|.|.|.+.+. ... .....+.|.|.+
T Consensus 83 ~Dsg~Y~C~~~~~~~~~~~~~~~~t~L~V~~ 113 (117)
T 3bp6_A 83 NDSGIYLCGAISLHPKLKIEESPGAELVVTE 113 (117)
T ss_dssp GGCEEEEEEEEECSSSCEEEECCCEEEEEC-
T ss_pred HHCEEEEEEEEecCCccccccCCcEEEEEEh
Confidence 9999999999876 321 112226777764
No 447
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=99.04 E-value=1.8e-09 Score=68.25 Aligned_cols=74 Identities=22% Similarity=0.419 Sum_probs=54.2
Q ss_pred eCCceeEEecCCcEEEEEEEeec-CCCeeEEEeCCE-----E---ec--------------cCcceEEEE--ecceEEEE
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGN-PLPAVSWFKDNV-----E---IT--------------TNKRLKIQF--KKKRSTLI 69 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~-p~p~i~W~~~g~-----~---l~--------------~~~~~~~~~--~~~~~~L~ 69 (176)
+.+..+.+.+|++++|.|...+. +...+.|+|... . +. ...|+.+.. .....+|.
T Consensus 3 Q~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (115)
T 2atp_B 3 QTPSSLLVQTNHTAKMSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRPFLS 82 (115)
T ss_dssp EECSEEEECTTSCEEEEEECCSSCCSSEEEEEEEEECSSCEEEEEEEEEETTTEEEECGGGTTTCCEEEESTTSSSCEEE
T ss_pred cCCCCEEEcCCCcEEEEEEecCCCCcccEEEEEeCCCCCCCccEEEEEEeCCCCeEecCCCccCcEEEEEeCCCCEEEEE
Confidence 44667889999999999998765 456899998431 1 10 124555544 23446899
Q ss_pred EcccCCCCCEEEEEEEEcC
Q psy8425 70 ITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 70 i~~v~~~d~G~Y~C~a~n~ 88 (176)
|.+++.+|+|.|.|.+...
T Consensus 83 I~~~~~~DsG~Y~C~~~~~ 101 (115)
T 2atp_B 83 IMNVKPEDSDFYFCATVGS 101 (115)
T ss_dssp ECSCCGGGCEEEEEEEECS
T ss_pred ECCCCHHHCEEEEEeEccC
Confidence 9999999999999998764
No 448
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=99.04 E-value=1.9e-09 Score=68.35 Aligned_cols=75 Identities=23% Similarity=0.356 Sum_probs=55.2
Q ss_pred EEeCCceeEEecCCcEEEEEEEeec-CCCeeEEEeCC--E--E-ec----------cCcceEEEEe--cceEEEEEcccC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGN-PLPAVSWFKDN--V--E-IT----------TNKRLKIQFK--KKRSTLIITRIR 74 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~-p~p~i~W~~~g--~--~-l~----------~~~~~~~~~~--~~~~~L~i~~v~ 74 (176)
+...+..+.+.+|++++|.|...+. +.+.+.|+|.. . . +. ...|+.+... ....+|.|.+++
T Consensus 3 v~q~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 82 (116)
T 1fo0_A 3 VTQTQTSISVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQ 82 (116)
T ss_dssp EECCCCEEEEETTCCEEECCEECCCCSSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEECSCC
T ss_pred cCcCCCcEEEecCCcEEEEeEecCCCCCeEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEeCCCCEEEEEECCCC
Confidence 3455677889999999999999876 55689999842 1 1 10 0244554322 345689999999
Q ss_pred CCCCEEEEEEEEc
Q psy8425 75 SEDAGRYECRGTG 87 (176)
Q Consensus 75 ~~d~G~Y~C~a~n 87 (176)
.+|+|.|.|.+.+
T Consensus 83 ~~DsG~Y~C~~~~ 95 (116)
T 1fo0_A 83 IEDSAVYFCAMRG 95 (116)
T ss_dssp GGGCEEEEEEEEC
T ss_pred hhhCEEEEEEEEc
Confidence 9999999999987
No 449
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.04 E-value=2.1e-10 Score=82.03 Aligned_cols=79 Identities=20% Similarity=0.153 Sum_probs=54.9
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeec-CC-CeeEEEeCCEEeccCcceEEEE--e-----cceEEEEEcccCCCCCEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGN-PL-PAVSWFKDNVEITTNKRLKIQF--K-----KKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~-p~i~W~~~g~~l~~~~~~~~~~--~-----~~~~~L~i~~v~~~d~G~ 80 (176)
+|.+...+.......|+.+.|.|.+.|. |. +.+.|+|+|..+.......... . ...+.|.|.++..+|+|.
T Consensus 154 ~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~ 233 (254)
T 2c1o_A 154 APTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNS 233 (254)
T ss_dssp CCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCE
T ss_pred CCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCe
Confidence 5665543333333468899999999885 44 3599999999886541111100 0 124689999999999999
Q ss_pred EEEEEEcC
Q psy8425 81 YECRGTGV 88 (176)
Q Consensus 81 Y~C~a~n~ 88 (176)
|+|.|.|.
T Consensus 234 Y~C~a~n~ 241 (254)
T 2c1o_A 234 YTCEATHK 241 (254)
T ss_dssp EEEEEECT
T ss_pred EEEEEEcC
Confidence 99999998
No 450
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.02 E-value=1.9e-10 Score=85.01 Aligned_cols=87 Identities=16% Similarity=0.147 Sum_probs=63.2
Q ss_pred CceeEEecCCcEEEEEEEeec-----CCCeeEEEeCCEEeccCcceEEEEecc-eEEEEEcccCCCCCEEEEEEEEcC-C
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGN-----PLPAVSWFKDNVEITTNKRLKIQFKKK-RSTLIITRIRSEDAGRYECRGTGV-H 89 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~-----p~p~i~W~~~g~~l~~~~~~~~~~~~~-~~~L~i~~v~~~d~G~Y~C~a~n~-g 89 (176)
+++..+..|++++|.|.+.+. |.+.+.|++||..+.. .++....... .+.|.|.++...|+|.|.|.+.+. +
T Consensus 7 p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~-~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~ 85 (313)
T 2d9q_B 7 VSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPG-GRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSL 85 (313)
T ss_dssp ESCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTT-CEECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSE
T ss_pred CCCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCc-cceEEEecCeEEEEEEEeccCCCccceEEeeecCCCc
Confidence 356678999999999999987 5789999999988754 2221111111 268999999999999999988654 3
Q ss_pred CceEEEEEEEEEecCCC
Q psy8425 90 KDVVSAFAEVSINLRPD 106 (176)
Q Consensus 90 ~~~~s~~~~l~V~~~p~ 106 (176)
..... +.|.|..+|.
T Consensus 86 ~~~~~--~~l~v~~~P~ 100 (313)
T 2d9q_B 86 QILDQ--VELRAGYPPA 100 (313)
T ss_dssp EEEEE--EEEEECCCCC
T ss_pred eeEEE--EEEccCCCCC
Confidence 32333 7777776665
No 451
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=99.02 E-value=5.7e-09 Score=65.98 Aligned_cols=75 Identities=19% Similarity=0.288 Sum_probs=55.4
Q ss_pred EEeCCceeEEecCCcEEEEEEEeec-CCCeeEEEeC--CE---Ee-c--c----------CcceEEEEecceEEEEEccc
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGN-PLPAVSWFKD--NV---EI-T--T----------NKRLKIQFKKKRSTLIITRI 73 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~-p~p~i~W~~~--g~---~l-~--~----------~~~~~~~~~~~~~~L~i~~v 73 (176)
+.. +..+.+.+|++++|.|...+. +.+.+.|+|. +. .+ . . ..|+.+.......+|.|.++
T Consensus 5 v~q-p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~~ 83 (115)
T 2otu_A 5 LTQ-SSSASFSLGASAKLTCTLSSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNI 83 (115)
T ss_dssp EEE-CCCEECCTTCCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred EEc-CCCEEECCCCCEEEEEEecCCCCCeEEEEEEeCCCCCceEEEEEecCCceecCcccCCCEEEEccCCEEEEEECCC
Confidence 344 667889999999999998765 5678999983 21 11 1 0 23555444355678999999
Q ss_pred CCCCCEEEEEEEEcC
Q psy8425 74 RSEDAGRYECRGTGV 88 (176)
Q Consensus 74 ~~~d~G~Y~C~a~n~ 88 (176)
+.+|+|.|.|.+.+.
T Consensus 84 ~~~Dsg~Y~C~~~~~ 98 (115)
T 2otu_A 84 QPEDEAIYICGVGDT 98 (115)
T ss_dssp CGGGCEEEEEEEEEC
T ss_pred ChhHCEEEEEEEecC
Confidence 999999999999875
No 452
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.02 E-value=2.7e-09 Score=77.08 Aligned_cols=73 Identities=22% Similarity=0.402 Sum_probs=53.8
Q ss_pred CCceeEEecCCcEEEEEEEeecCC--CeeEEEeC--CEEec-------------------cCcceEEEEe--cceEEEEE
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKGNPL--PAVSWFKD--NVEIT-------------------TNKRLKIQFK--KKRSTLII 70 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g~p~--p~i~W~~~--g~~l~-------------------~~~~~~~~~~--~~~~~L~i 70 (176)
.+....+.+|++++|.|.+.+.+. +.+.|+|+ +..+. ...++.+... ....+|.|
T Consensus 157 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 236 (268)
T 1x9q_A 157 ETGGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQM 236 (268)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEE
T ss_pred CCCceEecCCCcEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEE
Confidence 345678999999999999988763 78999984 22210 1234444432 13468999
Q ss_pred cccCCCCCEEEEEEEEcC
Q psy8425 71 TRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 71 ~~v~~~d~G~Y~C~a~n~ 88 (176)
.+++.+|+|.|.|.+.+.
T Consensus 237 ~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 237 NNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp CSCCGGGCEEEEEEEEET
T ss_pred CCCCHHHCEEEEEEEccC
Confidence 999999999999999875
No 453
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=99.02 E-value=1.2e-08 Score=66.45 Aligned_cols=93 Identities=18% Similarity=0.175 Sum_probs=63.8
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecC-CCeeEEEeC--CE--E-e----------ccCcceEEEEe--cceEEEEEcccC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNP-LPAVSWFKD--NV--E-I----------TTNKRLKIQFK--KKRSTLIITRIR 74 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p-~p~i~W~~~--g~--~-l----------~~~~~~~~~~~--~~~~~L~i~~v~ 74 (176)
+.+.+..+.+.+|++++|.|...... ...+.|||. |. . + ....|+.+... ....+|.|.+++
T Consensus 12 v~Q~p~~v~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~ 91 (134)
T 3bik_B 12 LTFYPAWLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTR 91 (134)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEECSCC
T ss_pred EEECCCeEEEeCCCCEEEEEEeCCCCCCcEEEEEEcCCCCCceEEEEEcCCCCCcccCCCEEEEecCCCCEEEEEECCCC
Confidence 45557788999999999999987654 468999983 21 1 1 01245555432 345689999999
Q ss_pred CCCCEEEEEEEEcC-CCc--eEEEEEEEEEecCC
Q psy8425 75 SEDAGRYECRGTGV-HKD--VVSAFAEVSINLRP 105 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~-g~~--~~s~~~~l~V~~~p 105 (176)
.+|+|.|.|.+.+. ... .......|.|...+
T Consensus 92 ~~Dsg~Y~C~~~~~~~~~~~~~~~gt~L~V~~~~ 125 (134)
T 3bik_B 92 RNDSGIYLCGAISLHPKAKIEESPGAELVVTERI 125 (134)
T ss_dssp GGGCEEEEEEEEECSSSCEEEECCCEEEEEECCC
T ss_pred hHHCEEEEEEEEeCCCCceEEEcCCEEEEEeCCC
Confidence 99999999999876 321 11122678887643
No 454
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.02 E-value=1.5e-10 Score=81.07 Aligned_cols=81 Identities=14% Similarity=0.189 Sum_probs=52.4
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEee-cCCC-eeEEEeCCEEeccCcceEEEEe---cceEEEEEcccCCCCCEEEEEEE
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKG-NPLP-AVSWFKDNVEITTNKRLKIQFK---KKRSTLIITRIRSEDAGRYECRG 85 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g-~p~p-~i~W~~~g~~l~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a 85 (176)
|.+...+....+.+|+.+.|.|.+.| .|.| .+.|+++|..+........... ...+.|.|... ..|.|.|+|.|
T Consensus 125 P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~-~~d~g~Y~C~a 203 (219)
T 1c1e_H 125 PSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS-PRPSETVTCNV 203 (219)
T ss_dssp CEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEESSSCEEEEEEEEEESS-STTTSCCEEEE
T ss_pred CeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCCcccceEecCCcccCCeEEEEEEEEEecc-cCCCCEEEEEE
Confidence 55543333334678999999999998 8999 9999999876421100000000 12357888444 44669999999
Q ss_pred EcC-CCce
Q psy8425 86 TGV-HKDV 92 (176)
Q Consensus 86 ~n~-g~~~ 92 (176)
.|. +...
T Consensus 204 ~n~~~~~~ 211 (219)
T 1c1e_H 204 AHPASSTK 211 (219)
T ss_dssp EEGGGTEE
T ss_pred EeCCCCcc
Confidence 998 5433
No 455
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.01 E-value=2.9e-10 Score=82.09 Aligned_cols=95 Identities=15% Similarity=0.107 Sum_probs=63.7
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEE-EecceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQ-FKKKRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
+|.+...+. ..+.+|++++|.|.+.+.+ +.+.|+|+|..+......... .......|.|.+++ |+|.|+|.+.+.
T Consensus 107 ~P~l~~~p~-~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~ 182 (257)
T 1b6u_A 107 KPSLSAQPG-PTVLAGESVTLSCSSRSSY-DMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFR 182 (257)
T ss_dssp CCEEECSSC-TTCBTTCEEEEEEECSSCC-SEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECS
T ss_pred CcceEccCC-CccCCCCEEEEEEeCCCCC-cEEEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcC
Confidence 456654444 3578999999999988754 689999999776542211100 00135789999998 999999999975
Q ss_pred -C---CceEEEEEEEEEecCCCCC
Q psy8425 89 -H---KDVVSAFAEVSINLRPDNM 108 (176)
Q Consensus 89 -g---~~~~s~~~~l~V~~~p~~~ 108 (176)
. ....+..+.|.|..+|...
T Consensus 183 ~~p~~~s~~S~pl~L~V~g~p~~~ 206 (257)
T 1b6u_A 183 DSPYEWSNSSDPLLVSVTGNPSNS 206 (257)
T ss_dssp SCTTBBCCCCCCEEECCBCCC---
T ss_pred CCCcccccCCCCEEEEEeccCCCC
Confidence 2 2233444788888877644
No 456
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.01 E-value=4e-09 Score=76.20 Aligned_cols=74 Identities=18% Similarity=0.346 Sum_probs=55.9
Q ss_pred eCCceeEEecCCcEEEEEEEeecC--CCeeEEEeCC--EEec-----------------cCcceEEEEe--cceEEEEEc
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDN--VEIT-----------------TNKRLKIQFK--KKRSTLIIT 71 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g--~~l~-----------------~~~~~~~~~~--~~~~~L~i~ 71 (176)
..+..+.+.+|++++|.|.+.+.+ .+.+.|+|+. ..+. ...|+.+... ....+|.|.
T Consensus 11 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 90 (261)
T 2xqy_G 11 QQPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLS 90 (261)
T ss_dssp ECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred ECCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEc
Confidence 345677899999999999998876 5789999852 2110 1245554432 245789999
Q ss_pred ccCCCCCEEEEEEEEcC
Q psy8425 72 RIRSEDAGRYECRGTGV 88 (176)
Q Consensus 72 ~v~~~d~G~Y~C~a~n~ 88 (176)
+++.+|+|.|.|.+.+.
T Consensus 91 ~v~~~DsG~Y~C~~~~~ 107 (261)
T 2xqy_G 91 SLTSEDSAVYYCGRLGY 107 (261)
T ss_dssp SCCGGGCEEEEEEEECT
T ss_pred CCCcccCeEEEEEEecC
Confidence 99999999999999986
No 457
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.01 E-value=5.2e-10 Score=77.80 Aligned_cols=81 Identities=22% Similarity=0.117 Sum_probs=57.5
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeecCCC--eeEEEeCCEEeccCc-ceE-EEEe-----cceEEEEEcccCCCCC
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLP--AVSWFKDNVEITTNK-RLK-IQFK-----KKRSTLIITRIRSEDA 78 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p--~i~W~~~g~~l~~~~-~~~-~~~~-----~~~~~L~i~~v~~~d~ 78 (176)
..+|.+...+....+..|+.+.|.|.+.|.+++ .+.|+++|..+.... ... .... ...+.|.|.....+|+
T Consensus 110 ~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~ 189 (213)
T 3r06_A 110 DAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERH 189 (213)
T ss_dssp CBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTC
T ss_pred CCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccC
Confidence 456776655555555678889999999987643 899999999886531 000 0000 1124688888888999
Q ss_pred EEEEEEEEcC
Q psy8425 79 GRYECRGTGV 88 (176)
Q Consensus 79 G~Y~C~a~n~ 88 (176)
|.|+|.|.|.
T Consensus 190 g~YtC~v~n~ 199 (213)
T 3r06_A 190 NLYTCEVTHK 199 (213)
T ss_dssp CEEEEEEEET
T ss_pred CeEEEEEEec
Confidence 9999999998
No 458
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.01 E-value=1.2e-09 Score=76.96 Aligned_cols=81 Identities=21% Similarity=0.169 Sum_probs=56.4
Q ss_pred cCCCeEEeCCceeEEecCCcEEEEEEEeec-C-CCeeEEEeCCEEeccCc-ce-EEEEe-----cceEEEEEcccCCCCC
Q psy8425 8 TIHPIEVSGLRNVSVKLRQSLRLVCRCKGN-P-LPAVSWFKDNVEITTNK-RL-KIQFK-----KKRSTLIITRIRSEDA 78 (176)
Q Consensus 8 ~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p-~p~i~W~~~g~~l~~~~-~~-~~~~~-----~~~~~L~i~~v~~~d~ 78 (176)
..+|.+...+....+.+|+.+.|.|.+.+. | .+.+.|+++|..+..+. .. ..... ...+.|.|.....+|.
T Consensus 133 ~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~ 212 (237)
T 3sob_L 133 VAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKH 212 (237)
T ss_dssp CBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTC
T ss_pred CCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCC
Confidence 345665544443344568899999999884 4 47999999999886521 00 00000 1135788999999999
Q ss_pred EEEEEEEEcC
Q psy8425 79 GRYECRGTGV 88 (176)
Q Consensus 79 G~Y~C~a~n~ 88 (176)
|.|+|.|.|.
T Consensus 213 g~Y~C~a~n~ 222 (237)
T 3sob_L 213 KVYACEVTHQ 222 (237)
T ss_dssp CEEEEEEECT
T ss_pred CcEEEEEeeC
Confidence 9999999998
No 459
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.00 E-value=5.6e-09 Score=73.77 Aligned_cols=72 Identities=17% Similarity=0.252 Sum_probs=51.5
Q ss_pred CceeEEecCCcEEEEEEEee--cCCCeeEEEeCC--E---Ee---c-----------cCcceEEEEe--cceEEEEEccc
Q psy8425 17 LRNVSVKLRQSLRLVCRCKG--NPLPAVSWFKDN--V---EI---T-----------TNKRLKIQFK--KKRSTLIITRI 73 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g--~p~p~i~W~~~g--~---~l---~-----------~~~~~~~~~~--~~~~~L~i~~v 73 (176)
+..+.+.+|++++|.|.+.+ .....+.|||.. . .+ . ...|+.+... ....+|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (230)
T 3n9g_H 7 SGAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSL 86 (230)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred cCCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCC
Confidence 34578999999999999875 234679999731 1 11 0 1245555433 24567999999
Q ss_pred CCCCCEEEEEEEEcC
Q psy8425 74 RSEDAGRYECRGTGV 88 (176)
Q Consensus 74 ~~~d~G~Y~C~a~n~ 88 (176)
+.+|+|.|.|.+.+.
T Consensus 87 ~~~DsG~Y~C~~~~~ 101 (230)
T 3n9g_H 87 RSEDTAVYYCARDWG 101 (230)
T ss_dssp CGGGCEEEEEEEECC
T ss_pred ChhhCEEEEEEEccC
Confidence 999999999999875
No 460
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=99.00 E-value=2.5e-10 Score=73.09 Aligned_cols=88 Identities=13% Similarity=0.180 Sum_probs=58.5
Q ss_pred eeEEecCCcEEEEEEE-eecCCCeeEEEeCCE-Eec---------cCcce--EEEEecceEEEEEcccCCCCCEEEEEEE
Q psy8425 19 NVSVKLRQSLRLVCRC-KGNPLPAVSWFKDNV-EIT---------TNKRL--KIQFKKKRSTLIITRIRSEDAGRYECRG 85 (176)
Q Consensus 19 ~~~v~~G~~~~l~C~~-~g~p~p~i~W~~~g~-~l~---------~~~~~--~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 85 (176)
.+.+.+|++++|.|.. .......+.|+++.. .+. ...++ ++.+...+.+|+|.+++.+|+|.|.|.+
T Consensus 13 pv~~~~G~~VtL~c~~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~~~~sL~I~nv~~~DsG~Y~c~v 92 (121)
T 2edo_A 13 HMTVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRV 92 (121)
T ss_dssp CCEEETTSCEEECCSSCCCSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECTTTCCEEESSCCGGGCSEEEEEE
T ss_pred EEEEEeCCCEEEeCCCCCCCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeCCCceEEEeCCCHHHCeEEEEEE
Confidence 4678999999999986 333445799999652 211 00111 1223235678999999999999999999
Q ss_pred EcCCCceEEEEEEEEEecCCC
Q psy8425 86 TGVHKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 86 ~n~g~~~~s~~~~l~V~~~p~ 106 (176)
.+.........+.|.|..++.
T Consensus 93 ~~~~~~~~~~~~~L~V~~~~~ 113 (121)
T 2edo_A 93 LKKTGNEQEWKIKLQVLDPVP 113 (121)
T ss_dssp EETTTEEEECCEECEEECCSC
T ss_pred EcCCCcEEEEEEEEEEECCCC
Confidence 877322223237888887543
No 461
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=98.99 E-value=1.2e-08 Score=65.57 Aligned_cols=90 Identities=21% Similarity=0.294 Sum_probs=60.6
Q ss_pred CCceeEEecCCcEEEEEEEeecCC-CeeEEEeCCE-----E-ecc--------CcceEEEEe--cceEEEEEcccCCCCC
Q psy8425 16 GLRNVSVKLRQSLRLVCRCKGNPL-PAVSWFKDNV-----E-ITT--------NKRLKIQFK--KKRSTLIITRIRSEDA 78 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~g~p~-p~i~W~~~g~-----~-l~~--------~~~~~~~~~--~~~~~L~i~~v~~~d~ 78 (176)
.+..+.+.+|++++|.|...+... ..+.|+|... . +.. ..|+.+... ....+|.|.+++.+|+
T Consensus 8 ~p~~v~~~~G~svtL~C~~s~~~~~~~~~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~Ds 87 (124)
T 2nms_A 8 GPTTVNGLERGSLTVQCVYRSGWETYLKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDA 87 (124)
T ss_dssp CCSEEEEETTCCEEEEEEECTTCTTSEEEEEESSSSTTCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred cccEEEEeCCCCEEEEeEEeCCcccccEEEEeCCCCCCceEEEEcCCcccceeCCCEEEEEcCcCCEEEEEEeCCCHHHC
Confidence 456678999999999999876533 3689998531 1 111 134444332 3456899999999999
Q ss_pred EEEEEEEEcCCCceEEEEEEEEEecCCC
Q psy8425 79 GRYECRGTGVHKDVVSAFAEVSINLRPD 106 (176)
Q Consensus 79 G~Y~C~a~n~g~~~~s~~~~l~V~~~p~ 106 (176)
|.|.|.+...+.. ....+.|.|..+|.
T Consensus 88 g~Y~C~~~~~~~~-~~~~v~L~V~~~~~ 114 (124)
T 2nms_A 88 DTYWCGIEKTGND-LGVTVQVTIDPAPV 114 (124)
T ss_dssp EEEEEEEEETTEE-EEEEEEEEEECCC-
T ss_pred EEEEEEEEcCCCC-ccEEEEEEEeCCCc
Confidence 9999999877322 22227777776554
No 462
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.99 E-value=8e-10 Score=76.80 Aligned_cols=97 Identities=11% Similarity=0.156 Sum_probs=62.6
Q ss_pred ccCCCeEEeCCceeEEecCCcEEEEEEE-eecCCCeeEEEeCCEEeccCcceEEEEe---cceEEEEEcccCCCCCEEEE
Q psy8425 7 ATIHPIEVSGLRNVSVKLRQSLRLVCRC-KGNPLPAVSWFKDNVEITTNKRLKIQFK---KKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 7 v~~~p~~~~~~~~~~v~~G~~~~l~C~~-~g~p~p~i~W~~~g~~l~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~ 82 (176)
+..+|.+...+.......++.+.+.|.+ .+.|.+.+.|++++..+........... ...+.|.|.++..+|+|.|+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Yt 197 (225)
T 4fmk_A 118 VIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVT 197 (225)
T ss_dssp EEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEE
T ss_pred eecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEE
Confidence 3445555444444556667777777765 5678889999998765443211110000 11357999999999999999
Q ss_pred EEEEcC-CCceEEEEEEEEEec
Q psy8425 83 CRGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 83 C~a~n~-g~~~~s~~~~l~V~~ 103 (176)
|.|.|. +....+..+.|.|++
T Consensus 198 C~a~N~~~~~~~~~~v~l~V~Y 219 (225)
T 4fmk_A 198 CRVEHESFEEPILLPVTLSVRY 219 (225)
T ss_dssp EEEECTTCSSCEEEEEECCBTT
T ss_pred EEEEcCCCCeEEEEEEEEEEEE
Confidence 999998 666555336666655
No 463
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.98 E-value=3e-09 Score=76.84 Aligned_cols=71 Identities=21% Similarity=0.428 Sum_probs=52.9
Q ss_pred ceeEEecCCcEEEEEEEeecCC--CeeEEEeCC--EE---ec--------------cCcceEEEEe--cceEEEEEcccC
Q psy8425 18 RNVSVKLRQSLRLVCRCKGNPL--PAVSWFKDN--VE---IT--------------TNKRLKIQFK--KKRSTLIITRIR 74 (176)
Q Consensus 18 ~~~~v~~G~~~~l~C~~~g~p~--p~i~W~~~g--~~---l~--------------~~~~~~~~~~--~~~~~L~i~~v~ 74 (176)
....+.+|++++|.|.+.+.+. +.+.|+|+. .. +. ...++.+... ....+|.|.+++
T Consensus 146 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 225 (264)
T 2gjj_A 146 GPEVVKTGASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLT 225 (264)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEcCCCcEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCC
Confidence 3447899999999999998764 789999963 21 11 0234444332 345789999999
Q ss_pred CCCCEEEEEEEEcC
Q psy8425 75 SEDAGRYECRGTGV 88 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~ 88 (176)
.+|+|.|.|.+.|.
T Consensus 226 ~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 226 SEDSADYYCVRSGN 239 (264)
T ss_dssp GGGCEEEEEEEECS
T ss_pred cccCEEEEEEEecC
Confidence 99999999999994
No 464
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=98.98 E-value=1.4e-08 Score=64.94 Aligned_cols=91 Identities=22% Similarity=0.253 Sum_probs=59.6
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeecC--CCeeEEEeCCE------Eec--------cCcceEEEEe--cceEEEEEccc
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDNV------EIT--------TNKRLKIQFK--KKRSTLIITRI 73 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g~------~l~--------~~~~~~~~~~--~~~~~L~i~~v 73 (176)
.+...+..+.+.+|++++|.|...... ...+.|+|... .+. ...|+.+... ....+|.|.++
T Consensus 12 ~~~~~~~~v~~~~G~svtL~C~~s~~~~~~~~v~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l 91 (122)
T 1hkf_A 12 QAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDL 91 (122)
T ss_dssp ---CCCEEEEECTTCCEEEEEECCCCTTCCCEEEEEEEEETTEEEEEEEECSTTCCBCSTTEEEEEETTTTEEEEEECSC
T ss_pred hhccCCceEEEecCCCEEEEeEccCCCCcccEEEEEcCCCCCCceEEEEeCCeEeEeecCcEEEEEcCcCCEEEEEEeCC
Confidence 455667778899999999999986532 35789998421 121 1245554322 45578999999
Q ss_pred CCCCCEEEEEEEEcCCCceEEEEEEEEEe
Q psy8425 74 RSEDAGRYECRGTGVHKDVVSAFAEVSIN 102 (176)
Q Consensus 74 ~~~d~G~Y~C~a~n~g~~~~s~~~~l~V~ 102 (176)
+.+|+|.|.|.+...+.......+.|.+.
T Consensus 92 ~~~Dsg~Y~C~v~~~~~~~~~~~~~l~L~ 120 (122)
T 1hkf_A 92 REEDSGHYWCRIYRPSDNSVSKSVRFYLV 120 (122)
T ss_dssp CGGGCEEEEEEEECTTTCCEEEEEEEEEE
T ss_pred CHHHCEEEEEEEEcCCCCcccccEEEEEE
Confidence 99999999999988732222222555444
No 465
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=98.98 E-value=7.8e-10 Score=82.26 Aligned_cols=88 Identities=13% Similarity=0.256 Sum_probs=64.1
Q ss_pred eEEeCCceeEEecCCcEEEEEEEeecC-CCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcCCC
Q psy8425 12 IEVSGLRNVSVKLRQSLRLVCRCKGNP-LPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGVHK 90 (176)
Q Consensus 12 ~~~~~~~~~~v~~G~~~~l~C~~~g~p-~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~g~ 90 (176)
.+..++..+.+..|++++|.|.+.+.+ .+.+.|++++..+... ..+.. ..++.|.|.++...|+|.|+|.+ .|.
T Consensus 8 ~~~~p~~~v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~~~~-~~~~~--~~~~~L~i~~v~~~d~G~Y~C~~--~g~ 82 (325)
T 1n26_A 8 AQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSH-PSRWA--GMGRRLLLRSVQLHDSGNYSCYR--AGR 82 (325)
T ss_dssp CCCCCTTEEEECTTCCEEEECTTSCTTCCSEEEEEEECSSSSCC-CEEEE--EESSEEEECSCCGGGCEEEEEES--SSS
T ss_pred ccccCCCcEECCCCCcEEEEeCCCCCCCCceEEEEECCccCCcc-ccccc--cccceEEecccchhhCeEeEEEe--CCE
Confidence 344445555567999999999988765 6799999988765321 11222 23468999999999999999992 355
Q ss_pred ceEEEEEEEEEecCCC
Q psy8425 91 DVVSAFAEVSINLRPD 106 (176)
Q Consensus 91 ~~~s~~~~l~V~~~p~ 106 (176)
...+ +.|.|..+|.
T Consensus 83 ~~~~--~~L~V~~pP~ 96 (325)
T 1n26_A 83 PAGT--VHLLVDVPPE 96 (325)
T ss_dssp CSCE--EEEEECCCCC
T ss_pred Eeee--EEEEeccCCC
Confidence 5566 8899988776
No 466
>1nez_G T-cell surface glycoprotein CD8 alpha chain; immune system; HET: NAG; 2.10A {Synthetic} SCOP: b.1.1.1 PDB: 1bqh_G* 3b9k_A* 2atp_A* 2arj_R
Probab=98.98 E-value=6.3e-09 Score=67.24 Aligned_cols=80 Identities=19% Similarity=0.326 Sum_probs=58.8
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEe--CCEE------ec---c-------------CcceEE-EEec
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFK--DNVE------IT---T-------------NKRLKI-QFKK 63 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~--~g~~------l~---~-------------~~~~~~-~~~~ 63 (176)
.++.+.+.+..+.+.+|++++|.|.+.+.....+.||+ .|.. |. . ..++.. ....
T Consensus 3 ~~~~v~Q~p~~~~v~~G~~vtL~C~~s~~~~~~v~WyrQ~~g~~l~~p~~l~~~~~~~~~~~~~~~~~~~~rfs~~~~~~ 82 (128)
T 1nez_G 3 QAPELRIFPKKMDAELGQKVDLVCEVLGSVSQGCSWLFQNSSSKLPQPTFVVYMASSHNKITWDEKLNSSKLFSAMRDTN 82 (128)
T ss_dssp -CCEEEEESSCEEECTTCCEEEEEEEESCCSSCEEEEEEESSCSSCCCEEEEEECSSSCCEEECTTTTGGGTEEEEEETT
T ss_pred cCCeeEECCCeEEEcCCCCEEEEEEeCccCCCcEEEEEeCCCCCCCCcEEEEEEecccCCceeeccccCCCcEEEEeCCC
Confidence 35667777888999999999999998776557899998 2321 10 0 134444 3334
Q ss_pred ceEEEEEcccCCCCCEEEEEEEEcC
Q psy8425 64 KRSTLIITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 64 ~~~~L~i~~v~~~d~G~Y~C~a~n~ 88 (176)
....|.|.+++.+|+|.|.|.+...
T Consensus 83 ~~~~L~I~~~~~~Dsg~YyCa~~~~ 107 (128)
T 1nez_G 83 NKYVLTLNKFSKENEGYYFCSVISN 107 (128)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CEEEEEECCCCHHHCEEEEEEEcCC
Confidence 4568999999999999999998754
No 467
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.98 E-value=1.8e-10 Score=81.24 Aligned_cols=84 Identities=15% Similarity=0.085 Sum_probs=56.1
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCC--CeeEEEeCCEEeccCcceE-EEEe-----cceEEEEEcccCCCCCEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPL--PAVSWFKDNVEITTNKRLK-IQFK-----KKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~--p~i~W~~~g~~l~~~~~~~-~~~~-----~~~~~L~i~~v~~~d~G~ 80 (176)
.+|.+...+....+.+|+.++|.|.+.|.++ +.+.|+|+|..+....... .... ...+.|.|..+..+|+|.
T Consensus 134 ~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~ 213 (234)
T 2j6e_L 134 AAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRS 213 (234)
T ss_dssp CCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCC
T ss_pred CCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCe
Confidence 3455443232223346889999999998643 3899999999886531100 0000 123579999999999999
Q ss_pred EEEEEEcC-CCce
Q psy8425 81 YECRGTGV-HKDV 92 (176)
Q Consensus 81 Y~C~a~n~-g~~~ 92 (176)
|+|.|.|. ....
T Consensus 214 Y~C~a~n~~~~~~ 226 (234)
T 2j6e_L 214 YSCQVTHEGSTVE 226 (234)
T ss_dssp EEEEEEBTTBCCC
T ss_pred EEEEEEeCCCceE
Confidence 99999998 4433
No 468
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=98.97 E-value=1.5e-09 Score=69.24 Aligned_cols=75 Identities=27% Similarity=0.425 Sum_probs=54.0
Q ss_pred EeCCceeEEecCCcEEEEEEEeecC----CCeeEEEeCC----EEecc-----CcceEEEE-----ecceEEEEEcccCC
Q psy8425 14 VSGLRNVSVKLRQSLRLVCRCKGNP----LPAVSWFKDN----VEITT-----NKRLKIQF-----KKKRSTLIITRIRS 75 (176)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~~~g~p----~p~i~W~~~g----~~l~~-----~~~~~~~~-----~~~~~~L~i~~v~~ 75 (176)
+..+..+.+.+|++++|.|...+.+ .+.+.|+|.. ..+.. ..++.+.. .....+|.|.+++.
T Consensus 11 v~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~g~~~~~~~~~~~~R~~~~~~~~~~~~~~~sL~I~~v~~ 90 (120)
T 3noi_A 11 VSQPPEIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNGTPEFRGRLAPLASSRFLHDHQAELHIRDVRG 90 (120)
T ss_dssp EECCSEEEEETTSCEEECCEECCCTTSCCCEEEEEEESSCSTTCBCCTTCTTTTTCEECCCHHHHHTTCBCCEEESSCCG
T ss_pred EcCCCEEEEEcCCCEEEEeeecCCCCCCceeEEEEEeccCCCCceecccccccCCcEEeecccccccCCcEEEEEecCCh
Confidence 3446678899999999999988765 4579999964 33321 13333221 12345899999999
Q ss_pred CCCEEEEEEEEcC
Q psy8425 76 EDAGRYECRGTGV 88 (176)
Q Consensus 76 ~d~G~Y~C~a~n~ 88 (176)
+|+|.|.|.+...
T Consensus 91 ~DsG~Y~C~v~~~ 103 (120)
T 3noi_A 91 HDASIYVCRVEVL 103 (120)
T ss_dssp GGCEEEEEEEEET
T ss_pred hhCEEEEEEEEEC
Confidence 9999999999854
No 469
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.97 E-value=2.4e-09 Score=76.88 Aligned_cols=79 Identities=23% Similarity=0.365 Sum_probs=57.0
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeec-CCCeeEEEeCC--EEec------------cCcceEEEEe--cceEEEEEcc
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGN-PLPAVSWFKDN--VEIT------------TNKRLKIQFK--KKRSTLIITR 72 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~p~i~W~~~g--~~l~------------~~~~~~~~~~--~~~~~L~i~~ 72 (176)
+|.+...+..+.+.+|++++|.|.+.+. |.+.+.|+|+. ..+. ...++.+... .....|.|.+
T Consensus 136 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 215 (259)
T 3omz_A 136 AQKVTQAQSSVSMPVRKAVTLNCLYETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISA 215 (259)
T ss_dssp -CEEECCCCCEEEETTCCEEECCEEECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESS
T ss_pred CeeeEEeCCEEEEcCCCCEEEEEECCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECC
Confidence 4567777888899999999999998875 78899999843 1111 0133333211 2345799999
Q ss_pred cCCCCCEEEEEEEEcC
Q psy8425 73 IRSEDAGRYECRGTGV 88 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n~ 88 (176)
++.+|+|.|.|.+.+.
T Consensus 216 v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 216 LQLEDSAKYFCALGES 231 (259)
T ss_dssp CCGGGCSEEEEEEESC
T ss_pred CChhHCEEEEEEEeCc
Confidence 9999999999999853
No 470
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.97 E-value=4.2e-08 Score=69.55 Aligned_cols=76 Identities=21% Similarity=0.336 Sum_probs=56.6
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecC--CCeeEEEeC--CE---Eec---------cCcceEEEEe--cceEEEEEcccC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKD--NV---EIT---------TNKRLKIQFK--KKRSTLIITRIR 74 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~--g~---~l~---------~~~~~~~~~~--~~~~~L~i~~v~ 74 (176)
+...+..+.+.+|++++|.|.+.+.+ .+.+.|+|. |. .+. ...|+.+... ....+|.|.+++
T Consensus 4 v~q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 83 (229)
T 1hxm_A 4 LVPEHQTVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPS 83 (229)
T ss_dssp EEESCSEEEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCC
T ss_pred cEeCCCEEEEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCC
Confidence 45567778899999999999998654 467999984 21 111 1245555432 445689999999
Q ss_pred CCCCEEEEEEEEcC
Q psy8425 75 SEDAGRYECRGTGV 88 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~ 88 (176)
.+|+|.|.|.+.+.
T Consensus 84 ~~Dsg~Y~C~~~~~ 97 (229)
T 1hxm_A 84 ERDEGSYYCACDTL 97 (229)
T ss_dssp GGGCEEEEEEEECC
T ss_pred HhHCeEEEEEEecC
Confidence 99999999999875
No 471
>4ety_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, extra celluar domain, domain swappin nysgrc, structural genomics; 1.90A {Mus musculus}
Probab=98.96 E-value=2.8e-08 Score=63.17 Aligned_cols=90 Identities=13% Similarity=0.073 Sum_probs=61.4
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCC----CeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPL----PAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECR 84 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~----p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 84 (176)
.+|.+...+. -.+..|++|+|.| .. ... ..+.|+|+|..+.. ...........+.|..++.+|+|.|+|.
T Consensus 8 pkPsL~a~P~-~vV~~G~~VTL~C-~~-~~~~~~~~~f~L~k~g~~~~~---~~~~~~~~~a~f~i~~vt~~daG~Y~C~ 81 (118)
T 4ety_A 8 PDITIFPNSS-LMISQGTFVTVVC-SY-SDKHDLYNMVRLEKDGSTFME---KSTEPYKTEDEFEIGPVNETITGHYSCI 81 (118)
T ss_dssp CEEEEECCSE-EEEETTCCEEEEE-EC-TTTGGGCCEEEEEETTEEEEE---EECCSSSSEEEEEECSCCGGGCEEEEEE
T ss_pred CCCEEEEeCC-CcccCCCcEEEEE-CC-CCCCcccCEEEEEECCcCccc---cccCCCCcceEEEeCccCccCCeEEEEE
Confidence 4555555554 4588999999999 54 333 47889999976431 0000013567899999999999999999
Q ss_pred EEcC-CCceEEEEEEEEEecC
Q psy8425 85 GTGV-HKDVVSAFAEVSINLR 104 (176)
Q Consensus 85 a~n~-g~~~~s~~~~l~V~~~ 104 (176)
..+. +....+..+.|.|...
T Consensus 82 y~~~~~wS~~Sdpl~L~Vtg~ 102 (118)
T 4ety_A 82 YSKGITWSERSKTLELKVIKE 102 (118)
T ss_dssp EEC----CEECCCEEEEEECC
T ss_pred eeCCCccccccCCEEEEEEEe
Confidence 9887 5555565678888764
No 472
>2hp4_A T-cell surface glycoprotein CD8 alpha chain; CO-receptor, soluble protein, KD, protein engineering, immunotherapy, immune-suppressor, immune system; 2.10A {Homo sapiens} PDB: 1akj_D 1cd8_A 3qzw_G 2q3a_A
Probab=98.96 E-value=4.6e-09 Score=66.40 Aligned_cols=76 Identities=17% Similarity=0.283 Sum_probs=55.6
Q ss_pred EEeCCceeEEecCCcEEEEEEEeec-CCCeeEEEeC--CE---E--e-c--c----------CcceEEEEecceEEEEEc
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGN-PLPAVSWFKD--NV---E--I-T--T----------NKRLKIQFKKKRSTLIIT 71 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~-p~p~i~W~~~--g~---~--l-~--~----------~~~~~~~~~~~~~~L~i~ 71 (176)
+...+..+.+.+|++++|.|...+. +...+.|+|. +. + + . . ..++.........+|+|.
T Consensus 3 ~~q~p~~v~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~g~~~~~~~l~~~~~~~~~~~~~~~~~rf~~~~~~~~~~L~I~ 82 (114)
T 2hp4_A 3 FRVSPLDRTWNLGETVELKCQVLLSNPTSGASWLFQPRGAAASPTFLLYLNQNKPKAAEGLDTQRFSGKRLGDTFVLTLS 82 (114)
T ss_dssp EEEECCSCCCCTTCCEEEEEEECCSSCCSCEEEEEEESSSSCCCEEEEEESSSSCEECTTCCTTTEEEEEETTEEEEEES
T ss_pred cEeCCCEEEEcCCCCEEEEEEeecCCCCceEEEEEECCCCCCCcEEEEEEcCCCccccCCCCcccEEEEecCCEEEEEEC
Confidence 4556777889999999999998754 3568999982 32 1 1 0 0 235544444555689999
Q ss_pred ccCCCCCEEEEEEEEcC
Q psy8425 72 RIRSEDAGRYECRGTGV 88 (176)
Q Consensus 72 ~v~~~d~G~Y~C~a~n~ 88 (176)
+++.+|+|.|.|.+.+.
T Consensus 83 ~~~~~Dsg~Y~C~~~~~ 99 (114)
T 2hp4_A 83 DFRRENEGYYFCSALSN 99 (114)
T ss_dssp SCCGGGCEEEEEEEEET
T ss_pred CCCHHHCEEEEEEEecC
Confidence 99999999999998874
No 473
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.96 E-value=1.2e-08 Score=72.41 Aligned_cols=75 Identities=17% Similarity=0.283 Sum_probs=55.2
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--EE---ec------------cCcceEEEEe-cceEEEEEcccC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--VE---IT------------TNKRLKIQFK-KKRSTLIITRIR 74 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~~---l~------------~~~~~~~~~~-~~~~~L~i~~v~ 74 (176)
+...+..+.+.+|++++|.|.+. .+.+.+.|+|++ .. +. ...|+.+... ....+|.|.+++
T Consensus 2 v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~ 80 (238)
T 1bec_A 2 VTQSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELAT 80 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCC
T ss_pred cccCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCC
Confidence 34567788899999999999985 467899999853 11 10 1234443321 345689999999
Q ss_pred CCCCEEEEEEEEcC
Q psy8425 75 SEDAGRYECRGTGV 88 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~ 88 (176)
.+|+|.|.|.+.+.
T Consensus 81 ~~D~G~Y~C~~~~~ 94 (238)
T 1bec_A 81 PSQTSVYFCASGGG 94 (238)
T ss_dssp GGGCEEEEEEEESC
T ss_pred cccCEEEEEEEecC
Confidence 99999999999986
No 474
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=98.96 E-value=1.9e-09 Score=67.87 Aligned_cols=74 Identities=14% Similarity=0.285 Sum_probs=54.3
Q ss_pred EEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeCC--E---Eec---------cCcceEEEEe--cceEEEEEcccCCC
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKDN--V---EIT---------TNKRLKIQFK--KKRSTLIITRIRSE 76 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g--~---~l~---------~~~~~~~~~~--~~~~~L~i~~v~~~ 76 (176)
+...+..+.+.+|++++|.|.+.+.+.+.+.|+|.. . .+. ...|+.+... ....+|.|.+++.+
T Consensus 3 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~ 82 (112)
T 2z35_A 3 VTQTGGQVALSEEDFLTIHCNYSASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQES 82 (112)
T ss_dssp EECSCSEEEEETTCCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCST
T ss_pred eEeCCCcEEEcCCCCEEEEEEECCCCCCeEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCCCEEEEEECCCChh
Confidence 345577788999999999999987777789999842 1 111 0134444321 23467999999999
Q ss_pred CCEEEEEEEE
Q psy8425 77 DAGRYECRGT 86 (176)
Q Consensus 77 d~G~Y~C~a~ 86 (176)
|+|.|.|.+.
T Consensus 83 DsG~Y~C~~~ 92 (112)
T 2z35_A 83 DSAVYYCALS 92 (112)
T ss_dssp TCSEEEEEEE
T ss_pred hCEEEEEEEE
Confidence 9999999988
No 475
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.96 E-value=6.5e-10 Score=77.30 Aligned_cols=82 Identities=13% Similarity=0.161 Sum_probs=55.2
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeec-CCC-eeEEEeCCEEeccCcceEEEE---ecceEEEEEcccCCCCCEEEEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGN-PLP-AVSWFKDNVEITTNKRLKIQF---KKKRSTLIITRIRSEDAGRYECR 84 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~p-~i~W~~~g~~l~~~~~~~~~~---~~~~~~L~i~~v~~~d~G~Y~C~ 84 (176)
+|.+...+....+.+|+.+.|.|.+.|. |.| .+.|++++..+.......+.. ....+.|.|..+..+| |.|+|.
T Consensus 118 ~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~ 196 (210)
T 3d9a_H 118 PPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCN 196 (210)
T ss_dssp CCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEE
T ss_pred CCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEE
Confidence 4555433323346789999999999987 888 999999987542110000100 0124579999988867 999999
Q ss_pred EEcC-CCce
Q psy8425 85 GTGV-HKDV 92 (176)
Q Consensus 85 a~n~-g~~~ 92 (176)
|.|. +...
T Consensus 197 a~n~~~~~~ 205 (210)
T 3d9a_H 197 VAHPASSTK 205 (210)
T ss_dssp EEEGGGTEE
T ss_pred EEeCCCCcc
Confidence 9998 5543
No 476
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.95 E-value=7.3e-10 Score=77.59 Aligned_cols=82 Identities=20% Similarity=0.165 Sum_probs=54.8
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeec-CCC-eeEEEeCCEEec--cCcceEE-EEecceEEEEEcccCCCCCEEEEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGN-PLP-AVSWFKDNVEIT--TNKRLKI-QFKKKRSTLIITRIRSEDAGRYECR 84 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~p-~i~W~~~g~~l~--~~~~~~~-~~~~~~~~L~i~~v~~~d~G~Y~C~ 84 (176)
+|.+...+....+.+|+.+.|.|.+.|. |.| .+.|++++.... ....... ......+.|.|..+..+| |.|+|.
T Consensus 125 ~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~ 203 (220)
T 1pz5_B 125 APSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICN 203 (220)
T ss_dssp CCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEE
T ss_pred CCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCCcccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEE
Confidence 4555443333346789999999999998 888 999999886310 0000000 000224679999988766 999999
Q ss_pred EEcC-CCce
Q psy8425 85 GTGV-HKDV 92 (176)
Q Consensus 85 a~n~-g~~~ 92 (176)
|.|. +...
T Consensus 204 a~n~~~~~~ 212 (220)
T 1pz5_B 204 VAHPASKVD 212 (220)
T ss_dssp EEEGGGTEE
T ss_pred EEECCccEe
Confidence 9999 6544
No 477
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.95 E-value=2.9e-09 Score=73.32 Aligned_cols=58 Identities=12% Similarity=0.215 Sum_probs=43.2
Q ss_pred ecCC-cEEEEEEEeec-CCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCC-CCEEEEEEEEcC-CCc
Q psy8425 23 KLRQ-SLRLVCRCKGN-PLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSE-DAGRYECRGTGV-HKD 91 (176)
Q Consensus 23 ~~G~-~~~l~C~~~g~-p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~-d~G~Y~C~a~n~-g~~ 91 (176)
..|. .+.|.|.+.+. |.|.+.|+++|..+... ..|.|.....+ |+|.|+|.|.|. +..
T Consensus 121 ~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~-----------~~l~i~~~~~~~d~G~Y~C~a~N~~g~~ 182 (193)
T 2if7_A 121 QNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQ-----------PNLTVSWDPRISSEQDYTCIAENAVSNL 182 (193)
T ss_dssp -CSSEEEEEEEEEESCCTTCEEEEEETTEEEESS-----------SEEEEEECTTTCSCCEEEEEEEETTEEE
T ss_pred cCCCceEEEEEEEecCCCceEEEEEeCCEEcCCC-----------CeEEEEeccCcCCCCcEEEEEECCCCcc
Confidence 3465 89999999985 57899999999876432 23555444444 899999999999 554
No 478
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.95 E-value=3.3e-09 Score=80.55 Aligned_cols=75 Identities=17% Similarity=0.243 Sum_probs=52.1
Q ss_pred EeCCceeE-EecCCcEEEEEEEeec-CCC---eeEEEeCCEEeccCcc-----eEEEEecceEEEEEcccCCCCCEEEEE
Q psy8425 14 VSGLRNVS-VKLRQSLRLVCRCKGN-PLP---AVSWFKDNVEITTNKR-----LKIQFKKKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 14 ~~~~~~~~-v~~G~~~~l~C~~~g~-p~p---~i~W~~~g~~l~~~~~-----~~~~~~~~~~~L~i~~v~~~d~G~Y~C 83 (176)
+..+.... +.+|++++|.|.+.|. |.| .+.|+|++..+..... +..........|.|..++.+|.|.|+|
T Consensus 171 ~~~p~~~~~~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C 250 (376)
T 2aty_A 171 IFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKC 250 (376)
T ss_pred EeCcCHHHceeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEE
Confidence 44444333 7889999999999987 333 6999999866532110 000000234579999999999999999
Q ss_pred EEEcC
Q psy8425 84 RGTGV 88 (176)
Q Consensus 84 ~a~n~ 88 (176)
.+.+.
T Consensus 251 ~~~~~ 255 (376)
T 2aty_A 251 RVNSA 255 (376)
T ss_pred EEecC
Confidence 99998
No 479
>3r8b_B G5-8, enterotoxin type B; immunoglobulin-like, OB-fold, toxin-immune system complex; 2.95A {Rattus norvegicus}
Probab=98.95 E-value=3.7e-08 Score=63.22 Aligned_cols=78 Identities=17% Similarity=0.281 Sum_probs=56.6
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeecCCCeeEEEeC--CEE---ec------------cCcceEEEEe-cceEEEEEcc
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKD--NVE---IT------------TNKRLKIQFK-KKRSTLIITR 72 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~--g~~---l~------------~~~~~~~~~~-~~~~~L~i~~ 72 (176)
..+...+..+.+.+|++++|.|.........+.|+|. +.. +. ...|+.+... ....+|.|.+
T Consensus 6 ~~V~Q~p~~~~v~~G~~vtL~C~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~Rf~~~~~~~~~~sL~I~~ 85 (125)
T 3r8b_B 6 AAVTQSPRNKVAVTGEKVTLSCKQTNSYFNNMYWYRQDTGHELRLIFMSHGIRNVEKGDIPDGYKASRPSQENFSLILEL 85 (125)
T ss_dssp CEEEEECSEEEEETTCCEEEEEEEESCCCSEEEEEEECTTSCEEEEEEESSTTCCEECSSCTTCEEEEEETTEEEEEETT
T ss_pred CcEEecCCeEEEcCCCcEEEEEEECCCCCCeEEEEEECCCCCcEEEEEEcCCccccCCCCCCceEEEecCCCEEEEEECC
Confidence 3456667788899999999999987665558999983 211 10 0134444322 4567899999
Q ss_pred cCCCCCEEEEEEEEcC
Q psy8425 73 IRSEDAGRYECRGTGV 88 (176)
Q Consensus 73 v~~~d~G~Y~C~a~n~ 88 (176)
++.+|+|.|.|.+...
T Consensus 86 ~~~~Dsg~Y~C~~~~~ 101 (125)
T 3r8b_B 86 ATPSQTSVYFCASGGG 101 (125)
T ss_dssp CCGGGCEEEEEEEEET
T ss_pred CChhhCEEEEEEEcCC
Confidence 9999999999998764
No 480
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.94 E-value=6.5e-10 Score=79.55 Aligned_cols=79 Identities=20% Similarity=0.161 Sum_probs=54.4
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeec-CCC-eeEEEeCCEEeccCcceEEEE--e-----cceEEEEEcccCCCCCEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGN-PLP-AVSWFKDNVEITTNKRLKIQF--K-----KKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~p-~i~W~~~g~~l~~~~~~~~~~--~-----~~~~~L~i~~v~~~d~G~ 80 (176)
+|.+...+....+.+|+.++|.|.+.|. |.+ .+.|+|+|..+.......... . ...+.|.|..+..+|+|.
T Consensus 150 ~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ 229 (252)
T 3bkj_L 150 APTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNS 229 (252)
T ss_dssp CCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCE
T ss_pred CcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCe
Confidence 4555443332234478999999999984 444 799999999876531111000 0 112569999999999999
Q ss_pred EEEEEEcC
Q psy8425 81 YECRGTGV 88 (176)
Q Consensus 81 Y~C~a~n~ 88 (176)
|+|.|.|.
T Consensus 230 Y~C~a~n~ 237 (252)
T 3bkj_L 230 YTCEATHK 237 (252)
T ss_dssp EEEEEECT
T ss_pred EEEEEEeC
Confidence 99999998
No 481
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=98.94 E-value=8.7e-09 Score=72.79 Aligned_cols=72 Identities=26% Similarity=0.389 Sum_probs=50.5
Q ss_pred CceeEEecCCcEEEEEEEeecC--CCee--EEEeCC--E---Ee-----cc-----------CcceEEEEe--cceEEEE
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNP--LPAV--SWFKDN--V---EI-----TT-----------NKRLKIQFK--KKRSTLI 69 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p--~p~i--~W~~~g--~---~l-----~~-----------~~~~~~~~~--~~~~~L~ 69 (176)
+..+.+.+|++++|.|.+.+.+ .+.+ .|+|.. . .+ .. ..|+.+... ....+|.
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 86 (232)
T 3qhz_H 7 SGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLT 86 (232)
T ss_dssp ECCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEE
T ss_pred CCCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEE
Confidence 3456789999999999997642 3455 999831 1 11 00 134544432 3456899
Q ss_pred EcccCCCCCEEEEEEEEcC
Q psy8425 70 ITRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 70 i~~v~~~d~G~Y~C~a~n~ 88 (176)
|.+++.+|+|.|.|.+.+.
T Consensus 87 I~~v~~~DsG~Y~C~~~~~ 105 (232)
T 3qhz_H 87 MTNMDPVDTATYYCARTLR 105 (232)
T ss_dssp ECSCCGGGCEEEEEEEECC
T ss_pred ECcCChhhCEEEEEEEeec
Confidence 9999999999999999875
No 482
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.93 E-value=7.1e-10 Score=78.23 Aligned_cols=79 Identities=19% Similarity=0.118 Sum_probs=50.4
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeecC-CC-eeEEEeCCEEeccCcceEEEE-e------cceEEEEEcccCCCCCEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGNP-LP-AVSWFKDNVEITTNKRLKIQF-K------KKRSTLIITRIRSEDAGR 80 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~p-~p-~i~W~~~g~~l~~~~~~~~~~-~------~~~~~L~i~~v~~~d~G~ 80 (176)
+|.+...+....+.+|+.++|.|.+.|.+ .+ .+.|+|+|..+.......... . ...+.|.|..+..+|+|.
T Consensus 134 ~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ 213 (233)
T 3bqu_C 134 APTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNS 213 (233)
T ss_dssp CCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCC
T ss_pred CCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCC
Confidence 56655433333344799999999999854 44 799999998876531111000 0 123578999999999999
Q ss_pred EEEEEEcC
Q psy8425 81 YECRGTGV 88 (176)
Q Consensus 81 Y~C~a~n~ 88 (176)
|+|.|.|.
T Consensus 214 Y~C~a~n~ 221 (233)
T 3bqu_C 214 YTCEATHK 221 (233)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 99999997
No 483
>4esk_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, domain swapping, collagen receptor, structural genomics; 1.76A {Mus musculus}
Probab=98.93 E-value=2.3e-08 Score=61.99 Aligned_cols=87 Identities=15% Similarity=0.091 Sum_probs=60.9
Q ss_pred CCCeEEeCCceeEEecCCcEEEEEEEeecCC----CeeEEEeCCEEeccCcceEEEE-ecceEEEEEcccCCCCCEEEEE
Q psy8425 9 IHPIEVSGLRNVSVKLRQSLRLVCRCKGNPL----PAVSWFKDNVEITTNKRLKIQF-KKKRSTLIITRIRSEDAGRYEC 83 (176)
Q Consensus 9 ~~p~~~~~~~~~~v~~G~~~~l~C~~~g~p~----p~i~W~~~g~~l~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C 83 (176)
.+|.+...+. -.+..|++|+|.| .. ... ..+.|+|+|..... .... ......+.|..++..|+|.|.|
T Consensus 8 pkPsL~a~p~-~~v~~G~~VTL~C-~~-~~~~~~~~~f~l~k~g~~~~~----~~~~~~~~~a~f~i~~vt~~~aG~Y~C 80 (102)
T 4esk_A 8 PDITIFPNSS-LMISQGTFVTVVC-SY-SDKHDLYNMVRLEKDGSTFME----KSTEPYKTEDEFEIGPVNETITGHYSC 80 (102)
T ss_dssp CEEEEECCSE-EEEETTCCEEEEE-EC-TTTGGGCCEEEEEETTEEEEE----EECCSSCSEEEEEECSCCGGGCEEEEE
T ss_pred CCCEEEEeCC-CcccCCCcEEEEE-CC-CcCCCcccEEEEEECCccccc----cccCCCCcceEEEeCcCCcccCeeEEE
Confidence 4556555554 4688999999999 64 333 57889999975431 1111 1356789999999999999999
Q ss_pred EEEcC-CCceEEEEEEEEEe
Q psy8425 84 RGTGV-HKDVVSAFAEVSIN 102 (176)
Q Consensus 84 ~a~n~-g~~~~s~~~~l~V~ 102 (176)
...+. +....+..+.|.|.
T Consensus 81 ~~~~~~~~S~~Sdpl~L~Vt 100 (102)
T 4esk_A 81 IYSKGITWSERSKTLELKVI 100 (102)
T ss_dssp EEEETTTEEEECCCEEEEEE
T ss_pred EEeCCCccccCcCCEEEEEE
Confidence 99887 44455655677664
No 484
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.92 E-value=7.7e-09 Score=72.72 Aligned_cols=71 Identities=11% Similarity=0.214 Sum_probs=50.0
Q ss_pred EecCCcEEEEEEEeec-CCC-eeEEEe-CCEEeccCcce--EEE--EecceEEEEEcccCC--CCCEEEEEEEEcC-CCc
Q psy8425 22 VKLRQSLRLVCRCKGN-PLP-AVSWFK-DNVEITTNKRL--KIQ--FKKKRSTLIITRIRS--EDAGRYECRGTGV-HKD 91 (176)
Q Consensus 22 v~~G~~~~l~C~~~g~-p~p-~i~W~~-~g~~l~~~~~~--~~~--~~~~~~~L~i~~v~~--~d~G~Y~C~a~n~-g~~ 91 (176)
+.+|+.+.|.|.+.+. |.| .+.|++ +|..+...... ... .....+.|.|..... +|.|.|+|.|.|. +..
T Consensus 138 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~ 217 (223)
T 1dee_B 138 SNPSSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNK 217 (223)
T ss_dssp CCSSSEEEEEEEEEEEBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCE
T ss_pred cCCCCcEEEEEEEEEEeCCCeEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCC
Confidence 5689999999999987 777 999999 88877430000 000 001235688887766 7899999999998 544
Q ss_pred e
Q psy8425 92 V 92 (176)
Q Consensus 92 ~ 92 (176)
.
T Consensus 218 ~ 218 (223)
T 1dee_B 218 E 218 (223)
T ss_dssp E
T ss_pred c
Confidence 3
No 485
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.92 E-value=7.2e-09 Score=72.71 Aligned_cols=82 Identities=15% Similarity=0.148 Sum_probs=54.3
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeec-CC--CeeEEEeCCEEeccC-cceEEEEe---cceEEEEEcccCCCCCEEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGN-PL--PAVSWFKDNVEITTN-KRLKIQFK---KKRSTLIITRIRSEDAGRYE 82 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~--p~i~W~~~g~~l~~~-~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~ 82 (176)
+|.+...+ ...+.+|+.++|.|.+.+. |. +.+.|++++..+... ........ ...+.|.|......|.|.|+
T Consensus 123 ~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~yt 201 (220)
T 2fbj_H 123 NPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVK 201 (220)
T ss_dssp CCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEE
T ss_pred CCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEE
Confidence 45544333 3345789999999999887 76 689999998765210 00000000 11246899999889999999
Q ss_pred EEEEcCCCce
Q psy8425 83 CRGTGVHKDV 92 (176)
Q Consensus 83 C~a~n~g~~~ 92 (176)
|.|.|.....
T Consensus 202 C~v~n~~~~~ 211 (220)
T 2fbj_H 202 CSVQHDSNPV 211 (220)
T ss_dssp EEEEETTSCC
T ss_pred EEEEcCCCce
Confidence 9999994333
No 486
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.91 E-value=1.7e-08 Score=71.37 Aligned_cols=76 Identities=14% Similarity=0.233 Sum_probs=55.8
Q ss_pred EEeCCceeEEecCCcEEEEEEEeec--CCCeeEEEeCC--EE---ec-------------cCcceEEEEe--cceEEEEE
Q psy8425 13 EVSGLRNVSVKLRQSLRLVCRCKGN--PLPAVSWFKDN--VE---IT-------------TNKRLKIQFK--KKRSTLII 70 (176)
Q Consensus 13 ~~~~~~~~~v~~G~~~~l~C~~~g~--p~p~i~W~~~g--~~---l~-------------~~~~~~~~~~--~~~~~L~i 70 (176)
+...+..+.+.+|++++|.|.+.+. +.+.+.|+|.. .. +. ...|+.+... ....+|.|
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (230)
T 1ypz_F 4 LEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTI 83 (230)
T ss_dssp EECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEE
T ss_pred ccccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEE
Confidence 4556778889999999999999875 56789999842 11 10 1234444322 14568999
Q ss_pred cccCCCCCEEEEEEEEcC
Q psy8425 71 TRIRSEDAGRYECRGTGV 88 (176)
Q Consensus 71 ~~v~~~d~G~Y~C~a~n~ 88 (176)
.+++.+|+|.|.|.+.+.
T Consensus 84 ~~v~~~D~G~Y~C~~~~~ 101 (230)
T 1ypz_F 84 YSLEEEDEAIYYCSYGEG 101 (230)
T ss_dssp CSCCGGGCSEEEEEECCT
T ss_pred CcCChhhCEEEEEEEECC
Confidence 999999999999999884
No 487
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=98.91 E-value=4.9e-09 Score=67.52 Aligned_cols=85 Identities=18% Similarity=0.287 Sum_probs=56.5
Q ss_pred CceeEEecCCcEEEEEEEeec---CCCeeEEEeCC--E---Ee-c--c----------CcceEEEEe--cceEEEEEccc
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGN---PLPAVSWFKDN--V---EI-T--T----------NKRLKIQFK--KKRSTLIITRI 73 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~---p~p~i~W~~~g--~---~l-~--~----------~~~~~~~~~--~~~~~L~i~~v 73 (176)
+..+.+.+|++++|.|...+. ....+.|+|.. . .+ . . ..|+.+... ....+|.|.++
T Consensus 7 p~~v~v~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~ 86 (126)
T 2h32_A 7 PPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISEL 86 (126)
T ss_dssp CSEEEEETTCCEEEEEEECTTSCGGGCEEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEECCCCCEEEEEEecCCCccccceEEEEEECCCCCCEEEEEEECCCCEEeCCCCCCCEEEEEeCCCCeEEEEECCC
Confidence 456789999999999998764 34679999832 1 11 1 0 234554432 34568999999
Q ss_pred CCCCCEEEEEEEEcC-CCceEEEEEEEEEec
Q psy8425 74 RSEDAGRYECRGTGV-HKDVVSAFAEVSINL 103 (176)
Q Consensus 74 ~~~d~G~Y~C~a~n~-g~~~~s~~~~l~V~~ 103 (176)
+.+|+|.|.|.+.+. +..... ..|.|..
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~--t~l~v~~ 115 (126)
T 2h32_A 87 QPEDEAMYYCAMGARSSEKEER--EREWEEE 115 (126)
T ss_dssp CGGGCEEEEEEEECSCCCCCCT--TCC----
T ss_pred ChhHCEEEEEEEEcCCCCccee--EEEeecc
Confidence 999999999999987 443333 4566654
No 488
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.91 E-value=2.2e-09 Score=74.66 Aligned_cols=83 Identities=13% Similarity=0.135 Sum_probs=54.0
Q ss_pred cccCCCeEEeCCceeEEecCCcEEEEEEEeec-CCC-eeEEEeCCEEeccCcceEEEEec-----ceEEEEEcccCCCCC
Q psy8425 6 RATIHPIEVSGLRNVSVKLRQSLRLVCRCKGN-PLP-AVSWFKDNVEITTNKRLKIQFKK-----KRSTLIITRIRSEDA 78 (176)
Q Consensus 6 ~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~p-~i~W~~~g~~l~~~~~~~~~~~~-----~~~~L~i~~v~~~d~ 78 (176)
.+..+|.+...+......+|+.+.|.|.+.|. |.+ .+.|+|+|..+............ ..+.|.|.....+|.
T Consensus 105 ~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~ 184 (207)
T 2vol_A 105 GRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAG 184 (207)
T ss_dssp CCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSC
T ss_pred CCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEEEEECHHHcCCC
Confidence 45567776544332223469999999999985 443 89999999987542111111111 123466666666789
Q ss_pred EEEEEEEEcC
Q psy8425 79 GRYECRGTGV 88 (176)
Q Consensus 79 G~Y~C~a~n~ 88 (176)
|.|+|.|.|.
T Consensus 185 g~ytC~a~n~ 194 (207)
T 2vol_A 185 NTFTCSVLHE 194 (207)
T ss_dssp CEEEEEEECT
T ss_pred CEEEEEEECC
Confidence 9999999998
No 489
>1u9k_A Triggering receptor expressed on myeloid cells 1; activating receptors, TREM-1, innate immunity, immune system receptor, immune system; 1.76A {Mus musculus} SCOP: b.1.1.1
Probab=98.91 E-value=8.2e-09 Score=65.17 Aligned_cols=74 Identities=14% Similarity=0.192 Sum_probs=53.0
Q ss_pred eCCceeEEecCCcEEEEEEEeecC--CCeeEEEeC--CE---Ee-cc-----------CcceEEEEe--cceEEEEEccc
Q psy8425 15 SGLRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKD--NV---EI-TT-----------NKRLKIQFK--KKRSTLIITRI 73 (176)
Q Consensus 15 ~~~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~--g~---~l-~~-----------~~~~~~~~~--~~~~~L~i~~v 73 (176)
..+..+.+.+|++++|.|...+.+ ...+.|+|. +. .+ .. ..|+.+... ....+|.|.++
T Consensus 4 q~p~~v~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~ 83 (114)
T 1u9k_A 4 LEEERYDLVEGQTLTVKCPFNIMKYANSQKAWQRLPDGKEPLTLVVTQRPFTRPSEVHMGKFTLKHDPSEAMLQVQMTDL 83 (114)
T ss_dssp -CCEEEEECTTCCEEEEEECCHHHHTTSEEEEEECCTTSCCEEEEECCSSTTSCEEEEETTEEEEEEGGGTEEEEEECSC
T ss_pred cCCccEEEeCCCcEEEEeEecCcccCCceEEEEEeCCCCCCEEEEEEcCCCCccccccCCcEEEEecCcCCEEEEEECCC
Confidence 345677899999999999987543 457999984 22 11 00 134444332 34568999999
Q ss_pred CCCCCEEEEEEEEcC
Q psy8425 74 RSEDAGRYECRGTGV 88 (176)
Q Consensus 74 ~~~d~G~Y~C~a~n~ 88 (176)
+.+|+|.|.|.+.+.
T Consensus 84 ~~~Dsg~Y~C~~~~~ 98 (114)
T 1u9k_A 84 QVTDSGLYRCVIYHP 98 (114)
T ss_dssp CGGGCEEEEEEEECT
T ss_pred ChHHCEEEEEEEecC
Confidence 999999999999987
No 490
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.90 E-value=4.7e-09 Score=75.17 Aligned_cols=74 Identities=16% Similarity=0.216 Sum_probs=53.0
Q ss_pred EeCCceeEEecCCcEEEEEEEeecCCCeeEEEeC--CEEe----c-c----------Cc-ceEEEEecceEEEEEcccCC
Q psy8425 14 VSGLRNVSVKLRQSLRLVCRCKGNPLPAVSWFKD--NVEI----T-T----------NK-RLKIQFKKKRSTLIITRIRS 75 (176)
Q Consensus 14 ~~~~~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~--g~~l----~-~----------~~-~~~~~~~~~~~~L~i~~v~~ 75 (176)
...+..+.+.+|++++|.|.+.+.+.+.+.|+|. +... . . .. ++.+....... |.|.+++.
T Consensus 5 ~q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~~ 83 (253)
T 3to4_D 5 EQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVANM 83 (253)
T ss_dssp EEECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEESC
T ss_pred EeCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCCh
Confidence 3446678899999999999998888899999982 1110 0 0 01 33333222222 99999999
Q ss_pred CCCEEEEEEEEcC
Q psy8425 76 EDAGRYECRGTGV 88 (176)
Q Consensus 76 ~d~G~Y~C~a~n~ 88 (176)
+|+|.|.|.+.+.
T Consensus 84 ~DsG~Y~C~~~~~ 96 (253)
T 3to4_D 84 SQGRTLYCTSSAD 96 (253)
T ss_dssp SSCEEEEEEEECS
T ss_pred hhCeEEEEEEecC
Confidence 9999999999876
No 491
>3bia_X T-cell immunoglobulin and mucin domain- containing protein 4; beta barrel, immunoglobulin fold, IGV domain, TIM, glycoprotein; HET: TLA; 2.20A {Mus musculus} PDB: 3bi9_X* 3bib_X*
Probab=98.90 E-value=1.3e-08 Score=64.32 Aligned_cols=89 Identities=17% Similarity=0.199 Sum_probs=57.2
Q ss_pred CceeEEecCCcEEEEEEEee--cCCCeeEEEeCC-EE-------ecc---------CcceEEEE--ecceEEEEEcccCC
Q psy8425 17 LRNVSVKLRQSLRLVCRCKG--NPLPAVSWFKDN-VE-------ITT---------NKRLKIQF--KKKRSTLIITRIRS 75 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g--~p~p~i~W~~~g-~~-------l~~---------~~~~~~~~--~~~~~~L~i~~v~~ 75 (176)
+..+.+.+|++++|.|...+ .....+.|++.. .. +.. ..++.+.. .....+|.|.+++.
T Consensus 3 ~~~v~~~~G~~vtL~C~~~~~~~~~~~v~W~r~~~~~~~~~~~l~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~ 82 (116)
T 3bia_X 3 EDTIIGFLGQPVTLPCHYLSWSQSRNSMCWGKGSCPNSKCNAELLRTDGTRIISRKSTKYTLLGKVQFGEVSLTISNTNR 82 (116)
T ss_dssp CEEEEEETTSCEEECCBCTTCCTTTCEEEEEESSCCSSSCTTEEEEECSSSEEEESSTTEEECSCGGGTBCCEEECSCCG
T ss_pred ccEEEEeeCCcEEEEEEeeCCCCCeEEEEEeeecCCCCCCceEEEEECCcccccccCceEEEeccCCCCEEEEEEccCCh
Confidence 45678999999999999762 233469999865 11 100 11222221 13345799999999
Q ss_pred CCCEEEEEEEEcCC-CceEEEEEEEEEecCC
Q psy8425 76 EDAGRYECRGTGVH-KDVVSAFAEVSINLRP 105 (176)
Q Consensus 76 ~d~G~Y~C~a~n~g-~~~~s~~~~l~V~~~p 105 (176)
+|+|.|.|.+...+ .......+.|.|..+|
T Consensus 83 ~Dsg~Y~C~v~~~~~~~~~~~~v~L~V~~~~ 113 (116)
T 3bia_X 83 GDSGVYCCRIEVPGWFNDVKKNVRLELRRAL 113 (116)
T ss_dssp GGCEEEEEEEECSSSSCCEEEEEEEEEECC-
T ss_pred hHCEEEEEEEEcCCcccceEEEEEEEEecCC
Confidence 99999999998753 2222322777776654
No 492
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=98.90 E-value=3.4e-08 Score=60.28 Aligned_cols=85 Identities=19% Similarity=0.278 Sum_probs=58.1
Q ss_pred ceeEEecCCcEEEEEEEee-cCCCeeEEEe-CC---EEeccCcceEEEEec--ceEEEEEcccCCCCCEEEEEEEEcCCC
Q psy8425 18 RNVSVKLRQSLRLVCRCKG-NPLPAVSWFK-DN---VEITTNKRLKIQFKK--KRSTLIITRIRSEDAGRYECRGTGVHK 90 (176)
Q Consensus 18 ~~~~v~~G~~~~l~C~~~g-~p~p~i~W~~-~g---~~l~~~~~~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~a~n~g~ 90 (176)
....+..|+.+.|.|.+.+ .+.|.++|-| ++ .+|..... .-.... ..-.|.+..+...|+|.|+|.|.+..+
T Consensus 19 S~hsv~~G~~f~leCpv~yc~~rP~VtWcKln~~~c~~L~~~~q-~w~E~~N~s~fvLhf~~V~~sDsGsYRCsAn~~sg 97 (120)
T 2aw2_A 19 SEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQT-SWKEEKNISFFILHFEPVLPNDNGSYRCSANFQSN 97 (120)
T ss_dssp EEEEEETTSCEEEEEEEECSSSCCEEEEEEECSSCEEECCSSCE-EEEECSSCEEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred ccceEecCCeEEEEccEEeccCCCceEEEecCCceEEECccccc-cceecCCeeEEEEEEeeeeEcCCcceEEEeeCCCC
Confidence 4457889999999999998 6899999988 44 45544211 000101 123799999999999999999999833
Q ss_pred ceEEEEEEEEEec
Q psy8425 91 DVVSAFAEVSINL 103 (176)
Q Consensus 91 ~~~s~~~~l~V~~ 103 (176)
...+-.+.|.|..
T Consensus 98 ~ieSHsvtI~Vt~ 110 (120)
T 2aw2_A 98 LIESHSTTLYVTD 110 (120)
T ss_dssp EEECCCEEEEEEC
T ss_pred cEEeeEEEEEEEe
Confidence 2322126666653
No 493
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.90 E-value=1.5e-09 Score=76.21 Aligned_cols=83 Identities=17% Similarity=0.182 Sum_probs=53.2
Q ss_pred cccCCCeEEeCCceeEEecCCcEEEEEEEee-cCCC-eeEEEeCCEEeccCcceEEEEecc-----eEEEEEcccCCCCC
Q psy8425 6 RATIHPIEVSGLRNVSVKLRQSLRLVCRCKG-NPLP-AVSWFKDNVEITTNKRLKIQFKKK-----RSTLIITRIRSEDA 78 (176)
Q Consensus 6 ~v~~~p~~~~~~~~~~v~~G~~~~l~C~~~g-~p~p-~i~W~~~g~~l~~~~~~~~~~~~~-----~~~L~i~~v~~~d~ 78 (176)
.+..+|.+...+......+|+.+.|.|.+.| .|.+ .+.|+|+|..+............+ .+.|.|.....+|.
T Consensus 113 ~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~ 192 (218)
T 2rgs_A 113 GLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKT 192 (218)
T ss_dssp CCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHHC
T ss_pred CCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecccEECCCCCEEEEEEEEECHHHcCCC
Confidence 4556777654333222235999999999998 5766 899999999875321111111111 13455555555579
Q ss_pred EEEEEEEEcC
Q psy8425 79 GRYECRGTGV 88 (176)
Q Consensus 79 G~Y~C~a~n~ 88 (176)
|.|+|.|.|.
T Consensus 193 g~YtC~a~n~ 202 (218)
T 2rgs_A 193 DSFSCNVRHE 202 (218)
T ss_dssp SCEEEEEECT
T ss_pred CeEEEEEEcC
Confidence 9999999998
No 494
>3bdb_A Novel immune-type receptor 11; immunoglobulin variable domain-like beta-sandwich, stalk region, immune system; 2.80A {Ictalurus punctatus}
Probab=98.90 E-value=5.6e-09 Score=68.23 Aligned_cols=90 Identities=14% Similarity=0.266 Sum_probs=61.5
Q ss_pred CCceeEEecCCcEEEEEEEe-ecCCCeeEEEeC--CE---Eec----c-----------CcceEEEEecceEEEEEcccC
Q psy8425 16 GLRNVSVKLRQSLRLVCRCK-GNPLPAVSWFKD--NV---EIT----T-----------NKRLKIQFKKKRSTLIITRIR 74 (176)
Q Consensus 16 ~~~~~~v~~G~~~~l~C~~~-g~p~p~i~W~~~--g~---~l~----~-----------~~~~~~~~~~~~~~L~i~~v~ 74 (176)
.+..+.+.+|++++|.|... +.....+.|+|. +. .+. . ..|+.+.......+|+|.+++
T Consensus 5 ~p~~v~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~L~I~~~~ 84 (137)
T 3bdb_A 5 ELHVKTVKRGENVTMECSMSKVTNKNNLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTVNDQKFDLNIIGAR 84 (137)
T ss_dssp BCEECCCCTTCEECCCCBCTTCCCGGGBEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEESSSBEEEEEESCC
T ss_pred CCCeEEEcCCCCEEEEeecCCCcCcceEEEEEECCCCCCEEEEEEEcCCCcceecCcccCCcEEEEecCCEEEEEECCCC
Confidence 35567789999999999987 666668999983 21 111 0 244555443455689999999
Q ss_pred CCCCEEEEEEEEcCCCceEEEEEEEEEecCC
Q psy8425 75 SEDAGRYECRGTGVHKDVVSAFAEVSINLRP 105 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~g~~~~s~~~~l~V~~~p 105 (176)
.+|+|.|.|.+.+........-..|.|...+
T Consensus 85 ~~Dsg~Y~C~~~~~~~~~fg~GT~L~V~~~~ 115 (137)
T 3bdb_A 85 EDDGGEYFCGEVEGIIIKFTSGTRLQFEGSN 115 (137)
T ss_dssp STTCEEEEEEEECSSCEEEEEEEEECCCCCC
T ss_pred HHHCEEEEEEEccCCeEEECCCEEEEEECCC
Confidence 9999999999987632222222567776543
No 495
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=98.89 E-value=1e-09 Score=88.76 Aligned_cols=92 Identities=22% Similarity=0.265 Sum_probs=64.0
Q ss_pred ceeEEecCCcEEEEEEEeecCCCeeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCEEEEEEEEcC-CC---ceE
Q psy8425 18 RNVSVKLRQSLRLVCRCKGNPLPAVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAGRYECRGTGV-HK---DVV 93 (176)
Q Consensus 18 ~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~-g~---~~~ 93 (176)
..+.+.+|+++.|.|.+.+ |.+.+.|++++.++.......+. ..+..|.|.+++..|+|.|.|.|.+. +. ...
T Consensus 541 ~~v~v~~g~~~~L~C~~~s-p~a~v~W~~~~~~l~~~~~~~~~--~~~~~LlI~~v~~~DsG~Y~C~A~e~~~~~~~~~~ 617 (663)
T 1olz_A 541 RQHFFKHGGTAELKCSQKS-NLARVFWKFQNGVLKAESPKYGL--MGRKNLLIFNLSEGDSGVYQCLSEERVKNKTVFQV 617 (663)
T ss_dssp EEEEEETTSCEEECCCCSC-TTCEEEEEESSSBCCCCSSSBCC--TTTTCEEECSCCGGGCEEEEEEEEEECSSSEEEEE
T ss_pred eEEEEecCCcEEEEccCCC-CCCcEEEEECCeeccccCcceEE--ecCCeEEEEecCcccCeEEEEEEEECccCCCceEE
Confidence 4568889999999999998 99999999999876543221111 23568999999999999999999998 33 122
Q ss_pred EEEEEEEEecCCCCCCCCC
Q psy8425 94 SAFAEVSINLRPDNMGGPC 112 (176)
Q Consensus 94 s~~~~l~V~~~p~~~g~p~ 112 (176)
...+.|.|..+|.....|.
T Consensus 618 ~~~~~l~V~v~P~~~~~p~ 636 (663)
T 1olz_A 618 VAKHVLEVKVVPKPVVAPT 636 (663)
T ss_dssp EEEEEEEEEC---------
T ss_pred EEEEEEEEEeCCccCCCCC
Confidence 2337889999998776664
No 496
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex (immunoglobulin/hydrolase), immunoglobulin V region, signal, hydrolase, glycosidase, bacteriolytic enzyme, egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B 1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H 1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Probab=98.89 E-value=1.9e-08 Score=63.69 Aligned_cols=72 Identities=24% Similarity=0.330 Sum_probs=52.1
Q ss_pred CceeEEecCCcEEEEEEEeecC--CCeeEEEeCC--E---Ee---cc----------CcceEEEEe--cceEEEEEcccC
Q psy8425 17 LRNVSVKLRQSLRLVCRCKGNP--LPAVSWFKDN--V---EI---TT----------NKRLKIQFK--KKRSTLIITRIR 74 (176)
Q Consensus 17 ~~~~~v~~G~~~~l~C~~~g~p--~p~i~W~~~g--~---~l---~~----------~~~~~~~~~--~~~~~L~i~~v~ 74 (176)
+..+.+.+|++++|.|...+.+ ...+.|+|.. . .+ .. ..|+.+... ....+|.|.+++
T Consensus 7 ~~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 86 (116)
T 1a2y_B 7 SGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLH 86 (116)
T ss_dssp ECCSEECTTSCEEEEEEEESSCTTSSEEEEEEECTTSCCEEEEEECTTSCEEECTTTGGGEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEEeCCCcEEEEEEEcCCCcCCcEEEEEEeCCCCCcEEEEEEecCCCeeeCcccCCcEEEEEECCCCEEEEEECCCC
Confidence 3447899999999999997653 3679999832 1 11 00 135555432 345789999999
Q ss_pred CCCCEEEEEEEEcC
Q psy8425 75 SEDAGRYECRGTGV 88 (176)
Q Consensus 75 ~~d~G~Y~C~a~n~ 88 (176)
.+|+|.|.|.+.+.
T Consensus 87 ~~Dsg~Y~C~~~~~ 100 (116)
T 1a2y_B 87 TDDTARYYCARERD 100 (116)
T ss_dssp GGGCEEEEEEEESS
T ss_pred HHHCEEEEEEEecC
Confidence 99999999999875
No 497
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.88 E-value=5.6e-10 Score=82.02 Aligned_cols=99 Identities=16% Similarity=0.142 Sum_probs=59.7
Q ss_pred CccccCCCeEE-eCCceeEEecCCcEEEEEEEeecCC-C--eeEEEeCCEEeccCcceEEEEecceEEEEEcccCCCCCE
Q psy8425 4 GLRATIHPIEV-SGLRNVSVKLRQSLRLVCRCKGNPL-P--AVSWFKDNVEITTNKRLKIQFKKKRSTLIITRIRSEDAG 79 (176)
Q Consensus 4 ~l~v~~~p~~~-~~~~~~~v~~G~~~~l~C~~~g~p~-p--~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G 79 (176)
.|.|+.+|.-. ..+....+.+|+.++|.|.+.|.++ . .++|||+++.+..... .......+|.+...+.+|.+
T Consensus 79 ~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~---~~~~~~~~l~~~~~~~D~g~ 155 (291)
T 1mq8_A 79 FLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPA---VGEPAEVTTTVLVRRDHHGA 155 (291)
T ss_dssp EEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEEC---CBTTEEEEEECCCSSSCSSC
T ss_pred EEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccC---CCCCceEEEEeeeeeccCCc
Confidence 35566666532 2222234788999999999987644 3 5899999988764220 00122345666666666667
Q ss_pred EEEEEEEcC-CC--c----eEEEEEEEEEecCC
Q psy8425 80 RYECRGTGV-HK--D----VVSAFAEVSINLRP 105 (176)
Q Consensus 80 ~Y~C~a~n~-g~--~----~~s~~~~l~V~~~p 105 (176)
.|+|.|.|. +. . ..+....|.|.++|
T Consensus 156 ~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P 188 (291)
T 1mq8_A 156 NFSCRTELDLRPQGLELFENTSAPYQLQTFVLP 188 (291)
T ss_dssp EEEEEEEEECGGGTSCEEEECCCCEECBC----
T ss_pred eEEEEEEecCCccCCccccccccceEEEEEecC
Confidence 999999987 42 1 12333678887765
No 498
>3dmm_D T-cell surface glycoprotein CD8 beta chain; T cell CO-receptor CD8AB MHC complex, immune response, membrane, MHC I, phosphoprotein, transmembrane; 2.60A {Mus musculus}
Probab=98.88 E-value=1.3e-08 Score=67.60 Aligned_cols=93 Identities=19% Similarity=0.339 Sum_probs=61.1
Q ss_pred CeEEeCCceeEEecCCcEEEEEEEeec-CCCeeEEEeC-----CEE---ec-----------c---CcceEEEEe--cce
Q psy8425 11 PIEVSGLRNVSVKLRQSLRLVCRCKGN-PLPAVSWFKD-----NVE---IT-----------T---NKRLKIQFK--KKR 65 (176)
Q Consensus 11 p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~p~i~W~~~-----g~~---l~-----------~---~~~~~~~~~--~~~ 65 (176)
|.+.+.+..+.+.+|++++|.|...+. ....+.|++. +.. |. . ..|+.+... ...
T Consensus 2 ~~v~Q~p~~~~v~~G~svtL~C~~s~~~~~~~v~Wyrq~~g~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~ 81 (150)
T 3dmm_D 2 SALIQTPSSLLVQTNHTAKMSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRR 81 (150)
T ss_dssp --CEEECSEEEEETTSCEEEEEECCCSSCCCEEEEEEEECCSSCCEEEEEEEEETTTEEEECTTTTTTCCEEEESTTSSS
T ss_pred CccEECCCeEEEeCCCcEEEEEEecCCCCCceEEEEEeCCCCCCCccEEEEEEecCCceEeCCCCccCcEEEEEcCCCCE
Confidence 345566778899999999999998764 5568999984 221 10 0 234444321 345
Q ss_pred EEEEEcccCCCCCEEEEEEEEcCCCceEEEEEEEEEec
Q psy8425 66 STLIITRIRSEDAGRYECRGTGVHKDVVSAFAEVSINL 103 (176)
Q Consensus 66 ~~L~i~~v~~~d~G~Y~C~a~n~g~~~~s~~~~l~V~~ 103 (176)
.+|.|.+++.+|+|.|.|.+...+......-..|.|..
T Consensus 82 ~sL~I~~l~~~Dsg~Y~C~~~~~~~~~fG~GT~L~V~~ 119 (150)
T 3dmm_D 82 PFLSIMNVKPEDSDFYFCATVGSPKMVFGTGTKLTVVD 119 (150)
T ss_dssp CEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEEES
T ss_pred EEEEECCCChhhCEEEEEEEecCCcceECCCEEEEEeC
Confidence 68999999999999999998764211111114566664
No 499
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.88 E-value=1.6e-08 Score=71.59 Aligned_cols=73 Identities=12% Similarity=0.153 Sum_probs=48.0
Q ss_pred EecC-CcEEEEEEEeec-CCC-eeEEEe-CCEEeccC---cceEE-EEecceEEEEEcccCC--CCCEEEEEEEEcC-CC
Q psy8425 22 VKLR-QSLRLVCRCKGN-PLP-AVSWFK-DNVEITTN---KRLKI-QFKKKRSTLIITRIRS--EDAGRYECRGTGV-HK 90 (176)
Q Consensus 22 v~~G-~~~~l~C~~~g~-p~p-~i~W~~-~g~~l~~~---~~~~~-~~~~~~~~L~i~~v~~--~d~G~Y~C~a~n~-g~ 90 (176)
+..| +.++|.|.+.+. |.| .+.|++ +|..+... ..... ......+.|.|..... +|.|.|+|.|.|. +.
T Consensus 137 ~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~ 216 (232)
T 1dn0_B 137 SPSDTSSVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGN 216 (232)
T ss_dssp ----CCSEEEEEEEEEEBSSCCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCC
T ss_pred cCCCCCcEEEEEEEEEEeCCCeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCC
Confidence 4578 999999999886 777 999999 98877530 00000 0001235788988876 7899999999999 55
Q ss_pred ceEE
Q psy8425 91 DVVS 94 (176)
Q Consensus 91 ~~~s 94 (176)
....
T Consensus 217 ~~~~ 220 (232)
T 1dn0_B 217 KEKN 220 (232)
T ss_dssp EEEE
T ss_pred ccee
Confidence 4433
No 500
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.86 E-value=5.9e-09 Score=73.51 Aligned_cols=82 Identities=15% Similarity=0.150 Sum_probs=51.9
Q ss_pred CCeEEeCCceeEEecCCcEEEEEEEeec-CCC-eeEEEeCCEEeccCcceEEEE---ecceEEEEEcccCCCCCEEEEEE
Q psy8425 10 HPIEVSGLRNVSVKLRQSLRLVCRCKGN-PLP-AVSWFKDNVEITTNKRLKIQF---KKKRSTLIITRIRSEDAGRYECR 84 (176)
Q Consensus 10 ~p~~~~~~~~~~v~~G~~~~l~C~~~g~-p~p-~i~W~~~g~~l~~~~~~~~~~---~~~~~~L~i~~v~~~d~G~Y~C~ 84 (176)
+|.+...+....+.+|+.+.|.|.+.|. |.| .+.|++++..+.......+.. ....+.|.|..+..+| |.|+|.
T Consensus 130 ~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~ 208 (228)
T 3bae_H 130 APSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCN 208 (228)
T ss_dssp CCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEE
T ss_pred CCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEE
Confidence 4555433333346789999999999986 878 999999887532111111110 0124578999888766 999999
Q ss_pred EEcC-CCce
Q psy8425 85 GTGV-HKDV 92 (176)
Q Consensus 85 a~n~-g~~~ 92 (176)
|.|. +...
T Consensus 209 ~~n~~~~~~ 217 (228)
T 3bae_H 209 VAHPASSTK 217 (228)
T ss_dssp EEEGGGTEE
T ss_pred EEECCCCCC
Confidence 9998 5433
Done!