Query psy8428
Match_columns 328
No_of_seqs 195 out of 1515
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 18:36:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8428.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8428hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ga4_A Dolichyl-diphosphooligo 100.0 4E-34 1.4E-38 249.4 13.4 150 33-184 5-167 (178)
2 2qsi_A Putative hydrogenase ex 99.8 2.4E-19 8.2E-24 149.4 11.4 110 42-169 11-122 (137)
3 2qgv_A Hydrogenase-1 operon pr 99.8 1.7E-19 5.9E-24 150.8 10.1 107 44-170 16-125 (140)
4 3h79_A Thioredoxin-like protei 99.8 1.4E-18 4.8E-23 141.4 14.2 114 44-168 13-126 (127)
5 3zzx_A Thioredoxin; oxidoreduc 99.8 1.6E-18 5.6E-23 137.9 12.6 102 48-168 2-104 (105)
6 3gnj_A Thioredoxin domain prot 99.7 1.1E-17 3.8E-22 131.7 12.2 108 45-170 3-110 (111)
7 2trx_A Thioredoxin; electron t 99.7 2.6E-17 8.9E-22 129.1 13.2 107 46-170 2-108 (108)
8 3hxs_A Thioredoxin, TRXP; elec 99.7 2.3E-17 8E-22 136.0 13.5 112 43-170 19-139 (141)
9 2av4_A Thioredoxin-like protei 99.7 7.9E-18 2.7E-22 142.9 10.3 120 48-182 23-155 (160)
10 2i4a_A Thioredoxin; acidophIle 99.7 6.9E-17 2.3E-21 126.1 13.0 106 46-169 2-107 (107)
11 3die_A Thioredoxin, TRX; elect 99.7 5.4E-17 1.9E-21 126.5 12.4 105 45-169 2-106 (106)
12 2voc_A Thioredoxin; electron t 99.7 7.7E-17 2.6E-21 128.1 13.2 106 47-172 2-107 (112)
13 3uvt_A Thioredoxin domain-cont 99.7 6.9E-17 2.4E-21 126.9 12.7 106 46-168 5-110 (111)
14 1thx_A Thioredoxin, thioredoxi 99.7 9.5E-17 3.3E-21 126.9 13.5 109 45-171 6-114 (115)
15 3tco_A Thioredoxin (TRXA-1); d 99.7 1.1E-16 3.8E-21 125.1 13.1 106 45-169 3-108 (109)
16 2o8v_B Thioredoxin 1; disulfid 99.7 7.4E-17 2.5E-21 132.0 12.3 107 46-170 22-128 (128)
17 1dby_A Chloroplast thioredoxin 99.7 1.3E-16 4.6E-21 124.8 13.1 105 47-169 2-106 (107)
18 2dml_A Protein disulfide-isome 99.7 1.2E-16 4E-21 129.8 12.6 109 45-170 16-124 (130)
19 2ppt_A Thioredoxin-2; thiredox 99.7 1.3E-16 4.6E-21 135.1 12.8 107 46-171 47-153 (155)
20 1x5d_A Protein disulfide-isome 99.7 1.1E-16 3.9E-21 130.1 11.7 114 45-172 6-119 (133)
21 1t00_A Thioredoxin, TRX; redox 99.7 1.9E-16 6.6E-21 125.0 12.6 107 46-170 5-111 (112)
22 1x5e_A Thioredoxin domain cont 99.7 1.5E-16 5.3E-21 128.7 11.9 109 45-174 6-114 (126)
23 1nsw_A Thioredoxin, TRX; therm 99.7 2E-16 7E-21 123.3 12.1 103 48-169 2-104 (105)
24 3aps_A DNAJ homolog subfamily 99.7 1.4E-16 4.7E-21 128.0 11.3 110 46-170 3-113 (122)
25 2yzu_A Thioredoxin; redox prot 99.7 2.8E-16 9.6E-21 122.6 12.6 106 47-171 2-107 (109)
26 2i1u_A Thioredoxin, TRX, MPT46 99.7 1.5E-16 5.2E-21 127.2 11.3 109 44-170 10-118 (121)
27 2l5l_A Thioredoxin; structural 99.7 3.4E-16 1.2E-20 128.9 13.7 112 46-173 9-129 (136)
28 1w4v_A Thioredoxin, mitochondr 99.7 2.1E-16 7.1E-21 127.1 11.9 108 45-170 12-119 (119)
29 1fb6_A Thioredoxin M; electron 99.7 3.2E-16 1.1E-20 121.8 12.6 103 48-168 2-104 (105)
30 1mek_A Protein disulfide isome 99.7 1.4E-16 4.9E-21 126.4 10.8 115 44-172 5-119 (120)
31 2pu9_C TRX-F, thioredoxin F-ty 99.7 4.1E-16 1.4E-20 123.3 13.3 106 45-169 4-110 (111)
32 1gh2_A Thioredoxin-like protei 99.7 4.5E-16 1.6E-20 122.2 13.4 105 47-170 2-107 (107)
33 3hz4_A Thioredoxin; NYSGXRC, P 99.7 2E-16 6.9E-21 131.1 11.8 109 45-171 5-113 (140)
34 3d6i_A Monothiol glutaredoxin- 99.7 3E-16 1E-20 124.1 12.2 107 47-169 1-108 (112)
35 1oaz_A Thioredoxin 1; immune s 99.7 1.5E-16 5E-21 129.5 9.6 107 46-170 3-123 (123)
36 3evi_A Phosducin-like protein 99.7 2.8E-16 9.4E-21 127.8 11.1 103 46-168 3-112 (118)
37 3qou_A Protein YBBN; thioredox 99.7 4.3E-16 1.5E-20 143.7 13.8 108 45-169 6-113 (287)
38 3qfa_C Thioredoxin; protein-pr 99.7 2.8E-16 9.4E-21 126.1 10.9 105 46-169 12-116 (116)
39 2e0q_A Thioredoxin; electron t 99.7 3.6E-16 1.2E-20 120.7 11.3 103 48-170 1-103 (104)
40 2dj3_A Protein disulfide-isome 99.7 9.3E-17 3.2E-21 130.9 8.0 116 45-173 6-121 (133)
41 2dj1_A Protein disulfide-isome 99.7 4.2E-16 1.4E-20 128.1 11.9 113 44-173 15-127 (140)
42 3p2a_A Thioredoxin 2, putative 99.7 4.7E-16 1.6E-20 129.6 12.3 108 45-171 37-144 (148)
43 1xwb_A Thioredoxin; dimerizati 99.7 1E-15 3.4E-20 119.2 12.2 103 48-168 2-105 (106)
44 1ep7_A Thioredoxin CH1, H-type 99.6 7.8E-16 2.7E-20 121.4 11.1 108 46-170 2-111 (112)
45 2djj_A PDI, protein disulfide- 99.6 3.3E-16 1.1E-20 125.4 8.8 115 44-172 5-119 (121)
46 1faa_A Thioredoxin F; electron 99.6 1.6E-15 5.6E-20 122.1 12.8 106 45-169 17-123 (124)
47 1v98_A Thioredoxin; oxidoreduc 99.6 9.8E-16 3.3E-20 126.5 11.5 106 46-170 33-138 (140)
48 3m9j_A Thioredoxin; oxidoreduc 99.6 2E-15 6.8E-20 117.5 12.4 103 48-169 2-105 (105)
49 1r26_A Thioredoxin; redox-acti 99.6 1.1E-15 3.8E-20 124.7 11.4 103 47-170 20-123 (125)
50 2dj0_A Thioredoxin-related tra 99.6 1E-16 3.5E-21 132.1 5.2 106 46-167 7-118 (137)
51 2es7_A Q8ZP25_salty, putative 99.6 3.5E-16 1.2E-20 131.1 8.4 107 47-173 18-128 (142)
52 3q6o_A Sulfhydryl oxidase 1; p 99.6 1.5E-15 5.1E-20 137.3 12.7 119 44-173 10-130 (244)
53 2vim_A Thioredoxin, TRX; thior 99.6 3.6E-15 1.2E-19 115.6 13.0 102 48-168 1-103 (104)
54 3ed3_A Protein disulfide-isome 99.6 1.8E-15 6.1E-20 141.7 13.3 118 45-174 16-146 (298)
55 4euy_A Uncharacterized protein 99.6 5.6E-16 1.9E-20 121.5 8.1 101 49-169 3-104 (105)
56 2r2j_A Thioredoxin domain-cont 99.6 1.1E-15 3.7E-20 147.5 11.8 116 46-174 5-121 (382)
57 2vlu_A Thioredoxin, thioredoxi 99.6 3.8E-15 1.3E-19 119.4 13.1 107 47-171 14-121 (122)
58 3f8u_A Protein disulfide-isome 99.6 1.2E-15 4.1E-20 150.8 12.2 112 46-173 1-112 (481)
59 2xc2_A Thioredoxinn; oxidoredu 99.6 2.3E-15 7.9E-20 120.2 11.5 103 47-169 14-117 (117)
60 1xfl_A Thioredoxin H1; AT3G510 99.6 4.4E-15 1.5E-19 120.7 12.7 107 45-169 15-123 (124)
61 2dbc_A PDCL2, unnamed protein 99.6 4.9E-15 1.7E-19 122.3 12.4 109 46-174 10-125 (135)
62 3apq_A DNAJ homolog subfamily 99.6 2.8E-15 9.6E-20 132.6 11.5 109 46-173 97-205 (210)
63 1syr_A Thioredoxin; SGPP, stru 99.6 6.5E-15 2.2E-19 116.8 12.4 103 46-169 9-111 (112)
64 1ti3_A Thioredoxin H, PTTRXH1; 99.6 4.9E-15 1.7E-19 116.8 11.3 107 45-169 3-111 (113)
65 2wz9_A Glutaredoxin-3; protein 99.6 8.4E-15 2.9E-19 123.1 13.0 109 45-172 11-120 (153)
66 3cxg_A Putative thioredoxin; m 99.6 3.3E-15 1.1E-19 123.0 10.1 108 45-170 19-129 (133)
67 3idv_A Protein disulfide-isome 99.6 1.3E-14 4.4E-19 129.6 14.6 109 47-172 131-239 (241)
68 2vm1_A Thioredoxin, thioredoxi 99.6 6.2E-15 2.1E-19 117.0 11.2 109 44-170 4-114 (118)
69 3emx_A Thioredoxin; structural 99.6 2.7E-15 9.2E-20 123.6 9.3 104 45-171 15-127 (135)
70 2b5e_A Protein disulfide-isome 99.6 6.5E-15 2.2E-19 146.6 13.8 114 45-174 13-126 (504)
71 3gix_A Thioredoxin-like protei 99.6 5.9E-15 2E-19 124.2 11.1 119 52-182 10-137 (149)
72 3f3q_A Thioredoxin-1; His TAG, 99.6 1.1E-14 3.7E-19 115.3 11.8 100 48-168 9-108 (109)
73 3dxb_A Thioredoxin N-terminall 99.6 8.9E-15 3.1E-19 130.6 12.6 109 46-172 12-120 (222)
74 2j23_A Thioredoxin; immune pro 99.6 7.5E-15 2.6E-19 118.4 11.0 106 45-169 14-120 (121)
75 3idv_A Protein disulfide-isome 99.6 6.7E-15 2.3E-19 131.5 11.8 112 44-172 13-124 (241)
76 3us3_A Calsequestrin-1; calciu 99.6 1.5E-14 5.2E-19 138.9 13.1 112 44-174 11-128 (367)
77 3d22_A TRXH4, thioredoxin H-ty 99.6 9.1E-15 3.1E-19 120.2 9.9 108 45-170 23-132 (139)
78 1sji_A Calsequestrin 2, calseq 99.6 2E-14 7E-19 136.7 13.4 111 44-174 9-126 (350)
79 1qgv_A Spliceosomal protein U5 99.6 1.6E-14 5.5E-19 120.5 10.9 119 52-182 10-137 (142)
80 2l57_A Uncharacterized protein 99.6 9.1E-15 3.1E-19 118.2 9.1 109 46-172 4-119 (126)
81 2l6c_A Thioredoxin; oxidoreduc 99.6 1.6E-14 5.4E-19 114.5 10.1 101 49-170 6-106 (110)
82 2djk_A PDI, protein disulfide- 99.5 2.3E-14 7.8E-19 118.0 10.0 107 48-172 8-117 (133)
83 3ul3_B Thioredoxin, thioredoxi 99.5 2.5E-14 8.4E-19 116.3 9.9 87 65-167 41-127 (128)
84 2f51_A Thioredoxin; electron t 99.5 5.3E-14 1.8E-18 113.1 11.6 110 46-171 3-114 (118)
85 2oe3_A Thioredoxin-3; electron 99.5 3E-14 1E-18 113.9 10.0 100 47-167 13-113 (114)
86 2c0g_A ERP29 homolog, windbeut 99.5 5.8E-14 2E-18 128.2 13.0 111 45-172 15-134 (248)
87 2trc_P Phosducin, MEKA, PP33; 99.5 2.7E-14 9.3E-19 127.8 10.5 104 47-168 100-211 (217)
88 2yj7_A LPBCA thioredoxin; oxid 99.3 7.1E-16 2.4E-20 119.5 0.0 104 47-168 2-105 (106)
89 3uem_A Protein disulfide-isome 99.5 8E-14 2.7E-18 132.6 13.5 109 46-170 249-357 (361)
90 1zma_A Bacterocin transport ac 99.5 1.6E-14 5.5E-19 115.5 7.2 103 45-166 11-117 (118)
91 2qc7_A ERP31, ERP28, endoplasm 99.5 8.4E-14 2.9E-18 126.6 12.2 107 44-169 3-118 (240)
92 3t58_A Sulfhydryl oxidase 1; o 99.5 8.9E-14 3.1E-18 139.6 13.4 118 45-173 11-130 (519)
93 1a0r_P Phosducin, MEKA, PP33; 99.5 1.2E-13 4.3E-18 125.8 11.8 119 34-170 96-226 (245)
94 3apo_A DNAJ homolog subfamily 99.5 8.8E-14 3E-18 145.4 11.6 110 46-174 116-225 (780)
95 3apo_A DNAJ homolog subfamily 99.5 3.2E-13 1.1E-17 141.1 15.6 134 28-173 525-659 (780)
96 1a8l_A Protein disulfide oxido 99.5 1.9E-13 6.4E-18 121.3 11.6 110 46-169 116-225 (226)
97 1wou_A Thioredoxin -related pr 99.5 2.9E-13 9.8E-18 109.6 11.5 106 48-167 7-122 (123)
98 3f8u_A Protein disulfide-isome 99.5 3.6E-13 1.2E-17 133.0 12.7 114 46-174 352-465 (481)
99 1wmj_A Thioredoxin H-type; str 99.4 2.8E-14 9.4E-19 115.4 3.6 109 45-171 13-123 (130)
100 3qcp_A QSOX from trypanosoma b 99.4 2.7E-14 9.1E-19 141.1 3.9 92 45-141 22-115 (470)
101 2kuc_A Putative disulphide-iso 99.4 1.8E-13 6.2E-18 110.8 7.8 110 48-172 8-123 (130)
102 3iv4_A Putative oxidoreductase 99.4 3.8E-13 1.3E-17 107.9 9.4 100 46-165 6-111 (112)
103 1nho_A Probable thioredoxin; b 99.4 4.5E-13 1.5E-17 100.1 8.5 81 69-169 4-84 (85)
104 1fo5_A Thioredoxin; disulfide 99.4 6.1E-13 2.1E-17 99.4 8.7 82 68-169 4-85 (85)
105 2fwh_A Thiol:disulfide interch 99.4 7.6E-13 2.6E-17 108.5 8.7 110 47-171 12-129 (134)
106 2b5e_A Protein disulfide-isome 99.4 1.3E-12 4.4E-17 130.0 11.9 113 46-173 358-470 (504)
107 2ywm_A Glutaredoxin-like prote 99.4 2.8E-12 9.7E-17 114.1 12.2 103 46-170 118-220 (229)
108 3uem_A Protein disulfide-isome 99.3 8.6E-12 2.9E-16 118.5 13.9 127 29-170 100-230 (361)
109 3fk8_A Disulphide isomerase; A 99.3 3.5E-12 1.2E-16 103.8 9.2 89 66-169 29-132 (133)
110 3f9u_A Putative exported cytoc 99.3 4E-12 1.4E-16 108.3 7.1 107 48-169 28-165 (172)
111 2hls_A Protein disulfide oxido 99.3 5.4E-11 1.9E-15 107.8 14.4 111 48-176 122-232 (243)
112 3dml_A Putative uncharacterize 99.2 1.4E-11 4.8E-16 99.6 6.1 90 67-170 19-110 (116)
113 1z6n_A Hypothetical protein PA 99.2 1.7E-11 5.9E-16 105.3 6.5 81 48-141 38-121 (167)
114 2ywm_A Glutaredoxin-like prote 99.2 7.2E-11 2.5E-15 104.9 10.6 80 81-170 36-115 (229)
115 2ju5_A Thioredoxin disulfide i 99.2 4.8E-11 1.7E-15 100.3 8.7 89 66-170 47-152 (154)
116 2lst_A Thioredoxin; structural 98.8 2.4E-12 8.1E-17 104.3 0.0 94 66-172 19-118 (130)
117 1ilo_A Conserved hypothetical 99.2 8.3E-11 2.8E-15 86.2 8.4 73 70-165 3-76 (77)
118 1ttz_A Conserved hypothetical 99.2 4.1E-11 1.4E-15 91.9 6.7 75 70-170 3-77 (87)
119 1a8l_A Protein disulfide oxido 99.2 1.3E-10 4.3E-15 102.9 10.7 100 54-169 10-112 (226)
120 2fgx_A Putative thioredoxin; N 99.1 9.2E-11 3.2E-15 93.5 7.8 77 68-165 30-106 (107)
121 3kp8_A Vkorc1/thioredoxin doma 99.1 5.8E-11 2E-15 94.1 6.6 73 68-167 14-92 (106)
122 3ira_A Conserved protein; meth 99.1 2.9E-11 9.8E-16 104.5 4.9 80 50-142 26-116 (173)
123 1lu4_A Soluble secreted antige 99.1 5.3E-10 1.8E-14 90.0 10.8 86 67-169 25-135 (136)
124 2b5x_A YKUV protein, TRXY; thi 99.1 5.8E-10 2E-14 91.0 10.8 104 49-170 15-145 (148)
125 1sen_A Thioredoxin-like protei 99.1 8.5E-11 2.9E-15 100.0 4.7 103 54-170 37-148 (164)
126 3erw_A Sporulation thiol-disul 99.1 9.4E-10 3.2E-14 89.4 10.7 87 65-165 33-144 (145)
127 1zzo_A RV1677; thioredoxin fol 99.1 1.3E-09 4.4E-14 87.4 11.2 87 67-170 26-135 (136)
128 3raz_A Thioredoxin-related pro 99.0 1.2E-09 4E-14 90.5 10.8 92 66-171 24-141 (151)
129 3or5_A Thiol:disulfide interch 99.0 1.6E-09 5.5E-14 90.3 11.5 93 66-172 34-153 (165)
130 2lja_A Putative thiol-disulfid 99.0 1.6E-09 5.5E-14 89.2 11.2 93 66-172 30-145 (152)
131 2f9s_A Thiol-disulfide oxidore 99.0 1.7E-09 5.6E-14 89.3 11.3 92 67-172 27-140 (151)
132 2h30_A Thioredoxin, peptide me 99.0 1.1E-09 3.9E-14 91.3 8.8 112 47-170 22-156 (164)
133 4evm_A Thioredoxin family prot 99.0 3.5E-09 1.2E-13 84.6 11.0 88 66-168 22-137 (138)
134 3hcz_A Possible thiol-disulfid 99.0 2.5E-09 8.4E-14 87.3 9.6 89 66-168 31-144 (148)
135 3gl3_A Putative thiol:disulfid 99.0 6.6E-09 2.3E-13 85.5 11.9 93 66-172 28-144 (152)
136 3fkf_A Thiol-disulfide oxidore 98.9 6.3E-09 2.1E-13 84.8 11.5 88 66-170 33-146 (148)
137 3ewl_A Uncharacterized conserv 98.9 3E-09 1E-13 86.7 9.5 88 66-170 27-141 (142)
138 3ph9_A Anterior gradient prote 98.9 4.3E-10 1.5E-14 95.0 4.5 93 66-169 44-144 (151)
139 3lor_A Thiol-disulfide isomera 98.9 5.6E-09 1.9E-13 86.7 11.3 91 66-170 30-155 (160)
140 2lrn_A Thiol:disulfide interch 98.9 5E-09 1.7E-13 86.7 10.8 88 67-171 30-142 (152)
141 2l5o_A Putative thioredoxin; s 98.9 8E-09 2.7E-13 85.1 11.6 91 67-171 29-142 (153)
142 3eyt_A Uncharacterized protein 98.9 8.1E-09 2.8E-13 85.6 11.0 91 66-170 28-152 (158)
143 4f9z_D Endoplasmic reticulum r 98.9 2.2E-08 7.4E-13 89.3 14.4 122 32-169 99-224 (227)
144 3ia1_A THIO-disulfide isomeras 98.9 5.1E-09 1.8E-13 86.5 9.6 89 67-172 31-146 (154)
145 3hdc_A Thioredoxin family prot 98.9 9.1E-09 3.1E-13 85.8 11.2 93 66-172 41-154 (158)
146 3eur_A Uncharacterized protein 98.9 6.5E-09 2.2E-13 85.0 9.6 85 66-167 31-142 (142)
147 1hyu_A AHPF, alkyl hydroperoxi 98.9 1.1E-08 3.8E-13 102.3 12.0 100 46-168 99-198 (521)
148 3kp9_A Vkorc1/thioredoxin doma 98.9 8.2E-10 2.8E-14 102.9 3.3 76 69-166 200-276 (291)
149 3ha9_A Uncharacterized thiored 98.9 2.2E-08 7.4E-13 83.9 11.7 88 65-170 36-164 (165)
150 3lwa_A Secreted thiol-disulfid 98.8 1.9E-08 6.5E-13 85.9 10.9 95 66-169 59-180 (183)
151 3kcm_A Thioredoxin family prot 98.8 2.3E-08 7.8E-13 82.4 10.5 92 66-171 28-144 (154)
152 1wjk_A C330018D20RIK protein; 98.8 9.2E-09 3.1E-13 80.4 7.4 80 66-170 15-96 (100)
153 3s9f_A Tryparedoxin; thioredox 98.8 1.9E-08 6.3E-13 85.2 9.3 68 67-142 49-141 (165)
154 2hls_A Protein disulfide oxido 98.8 3.2E-08 1.1E-12 89.4 11.3 96 55-168 16-115 (243)
155 1i5g_A Tryparedoxin II; electr 98.8 1.9E-08 6.6E-13 82.2 8.8 68 66-141 28-120 (144)
156 1o8x_A Tryparedoxin, TRYX, TXN 98.8 2E-08 6.9E-13 82.4 8.8 68 66-141 28-120 (146)
157 2b1k_A Thiol:disulfide interch 98.8 1.6E-08 5.6E-13 84.9 8.3 86 66-169 51-159 (168)
158 1kng_A Thiol:disulfide interch 98.8 2.5E-08 8.5E-13 82.2 8.7 87 66-169 42-151 (156)
159 1o73_A Tryparedoxin; electron 98.7 2.4E-08 8.1E-13 81.5 8.4 67 67-141 29-120 (144)
160 4fo5_A Thioredoxin-like protei 98.7 4.5E-08 1.5E-12 80.0 9.7 86 65-167 31-142 (143)
161 3fw2_A Thiol-disulfide oxidore 98.7 1.2E-07 4E-12 78.1 11.8 87 66-169 33-147 (150)
162 2lrt_A Uncharacterized protein 98.7 7.8E-08 2.7E-12 79.9 10.3 85 67-165 36-143 (152)
163 2lus_A Thioredoxion; CR-Trp16, 98.2 1.7E-09 5.9E-14 88.0 0.0 69 68-143 28-121 (143)
164 2k8s_A Thioredoxin; dimer, str 98.7 6.6E-09 2.3E-13 77.3 3.1 58 69-136 3-61 (80)
165 2dlx_A UBX domain-containing p 98.7 9.5E-08 3.2E-12 80.7 9.5 102 53-170 28-136 (153)
166 2ywi_A Hypothetical conserved 98.7 7.1E-08 2.4E-12 83.0 8.8 91 67-170 47-174 (196)
167 1jfu_A Thiol:disulfide interch 98.6 2.8E-07 9.6E-12 78.6 11.6 91 66-170 60-180 (186)
168 2cvb_A Probable thiol-disulfid 98.6 1.5E-07 5.3E-12 80.5 9.8 95 66-170 33-159 (188)
169 2hyx_A Protein DIPZ; thioredox 98.6 2E-07 6.7E-12 89.1 10.8 92 65-170 81-199 (352)
170 2e7p_A Glutaredoxin; thioredox 98.6 3.2E-08 1.1E-12 78.2 4.3 78 68-168 21-106 (116)
171 3kh7_A Thiol:disulfide interch 98.6 2E-07 6.9E-12 79.5 9.4 87 66-170 58-167 (176)
172 1ego_A Glutaredoxin; electron 98.5 7.7E-08 2.6E-12 71.6 4.7 75 70-169 3-83 (85)
173 2ls5_A Uncharacterized protein 97.9 1.6E-08 5.3E-13 84.2 0.0 90 66-169 33-147 (159)
174 2bmx_A Alkyl hydroperoxidase C 98.5 7.5E-07 2.6E-11 77.1 10.4 99 67-182 46-179 (195)
175 3u5r_E Uncharacterized protein 98.5 2.4E-07 8.3E-12 81.9 7.3 90 68-170 61-187 (218)
176 2ggt_A SCO1 protein homolog, m 98.5 8.8E-07 3E-11 73.5 10.0 94 67-170 24-161 (164)
177 1sji_A Calsequestrin 2, calseq 98.4 2.1E-06 7.2E-11 81.1 13.2 127 31-170 211-346 (350)
178 2rli_A SCO2 protein homolog, m 98.4 1.8E-06 6.2E-11 72.2 10.7 95 66-170 26-164 (171)
179 3drn_A Peroxiredoxin, bacterio 98.4 7.5E-07 2.6E-11 74.5 7.9 67 67-142 30-122 (161)
180 1we0_A Alkyl hydroperoxide red 98.4 1.5E-06 5.2E-11 74.4 10.0 102 67-182 32-171 (187)
181 2k6v_A Putative cytochrome C o 98.4 9.4E-07 3.2E-11 73.9 8.2 90 67-168 36-171 (172)
182 1zof_A Alkyl hydroperoxide-red 98.4 1.3E-06 4.3E-11 75.7 9.1 103 66-182 33-174 (198)
183 2p5q_A Glutathione peroxidase 98.3 3.9E-06 1.3E-10 69.9 10.3 90 67-170 33-168 (170)
184 3cmi_A Peroxiredoxin HYR1; thi 98.3 3E-06 1E-10 71.4 9.3 89 67-170 33-168 (171)
185 3gyk_A 27KDA outer membrane pr 98.3 2.9E-06 9.8E-11 71.8 9.1 84 64-169 20-172 (175)
186 2v1m_A Glutathione peroxidase; 98.3 4.1E-06 1.4E-10 69.7 9.9 42 67-117 32-73 (169)
187 2vup_A Glutathione peroxidase- 98.3 4.1E-06 1.4E-10 72.0 9.9 90 66-169 48-184 (190)
188 1xvw_A Hypothetical protein RV 98.3 4.4E-06 1.5E-10 69.2 9.7 86 68-167 38-157 (160)
189 1eej_A Thiol:disulfide interch 98.2 2.5E-06 8.4E-11 75.5 8.1 91 64-168 84-209 (216)
190 3dwv_A Glutathione peroxidase- 98.2 8.1E-06 2.8E-10 70.0 11.1 91 66-170 46-183 (187)
191 1h75_A Glutaredoxin-like prote 98.2 7.7E-07 2.6E-11 65.6 3.5 71 70-168 3-76 (81)
192 1qmv_A Human thioredoxin perox 98.2 9.4E-06 3.2E-10 70.2 10.1 102 67-182 35-176 (197)
193 2obi_A PHGPX, GPX-4, phospholi 98.2 6.5E-06 2.2E-10 70.2 8.9 42 67-117 48-89 (183)
194 2p31_A CL683, glutathione pero 98.2 6.6E-06 2.2E-10 70.2 8.9 90 66-169 49-180 (181)
195 1r7h_A NRDH-redoxin; thioredox 98.1 6.1E-06 2.1E-10 59.5 7.3 69 70-166 3-74 (75)
196 1zye_A Thioredoxin-dependent p 98.1 1.2E-05 4.2E-10 71.1 10.2 102 67-182 57-198 (220)
197 1uul_A Tryparedoxin peroxidase 98.1 5.1E-06 1.7E-10 72.3 7.5 102 67-182 37-178 (202)
198 4f9z_D Endoplasmic reticulum r 98.1 7.8E-06 2.7E-10 72.6 8.7 103 46-173 9-115 (227)
199 2h01_A 2-Cys peroxiredoxin; th 98.1 1.5E-05 5.2E-10 68.5 10.1 102 67-182 32-172 (192)
200 1t3b_A Thiol:disulfide interch 98.1 7.6E-06 2.6E-10 72.1 7.6 84 64-168 84-209 (211)
201 2i81_A 2-Cys peroxiredoxin; st 98.0 2.5E-05 8.4E-10 68.9 10.0 90 67-169 53-179 (213)
202 3us3_A Calsequestrin-1; calciu 98.0 3.6E-05 1.2E-09 73.3 11.4 132 31-173 213-351 (367)
203 1v58_A Thiol:disulfide interch 98.0 1.8E-05 6.2E-10 71.2 8.8 87 67-171 98-234 (241)
204 1kte_A Thioltransferase; redox 98.0 5.2E-06 1.8E-10 64.3 4.4 64 54-135 3-73 (105)
205 2f8a_A Glutathione peroxidase 97.9 4.3E-05 1.5E-09 67.1 10.2 43 66-117 47-89 (208)
206 3bj5_A Protein disulfide-isome 97.9 8.2E-05 2.8E-09 61.9 11.0 112 47-173 15-130 (147)
207 2gs3_A PHGPX, GPX-4, phospholi 97.9 4.5E-05 1.5E-09 65.1 9.0 42 67-117 50-91 (185)
208 3kij_A Probable glutathione pe 97.9 2.8E-05 9.5E-10 66.1 7.6 43 66-117 38-80 (180)
209 2jsy_A Probable thiol peroxida 97.9 3.3E-05 1.1E-09 64.4 7.5 86 68-168 46-165 (167)
210 3gkn_A Bacterioferritin comigr 97.8 4.8E-05 1.6E-09 63.1 8.1 88 68-168 37-160 (163)
211 2b7k_A SCO1 protein; metalloch 97.8 2.9E-05 1E-09 67.4 7.0 94 66-170 41-179 (200)
212 2hze_A Glutaredoxin-1; thiored 97.8 8.1E-06 2.8E-10 64.7 3.0 55 69-136 20-81 (114)
213 1xzo_A BSSCO, hypothetical pro 97.8 0.00018 6.1E-09 59.9 11.3 92 67-170 34-172 (174)
214 3ztl_A Thioredoxin peroxidase; 97.8 4.8E-05 1.7E-09 67.3 8.1 89 66-168 69-196 (222)
215 1xvq_A Thiol peroxidase; thior 97.8 6.5E-05 2.2E-09 63.6 7.9 88 67-170 45-168 (175)
216 2l4c_A Endoplasmic reticulum r 97.7 0.00039 1.3E-08 56.2 11.3 96 47-168 22-122 (124)
217 3ic4_A Glutaredoxin (GRX-1); s 97.7 4.7E-05 1.6E-09 57.4 5.0 69 70-166 14-91 (92)
218 3h93_A Thiol:disulfide interch 97.7 0.00014 4.9E-09 62.2 8.7 41 66-116 25-65 (192)
219 2lqo_A Putative glutaredoxin R 97.7 0.00012 4.2E-09 56.1 7.3 77 69-172 5-86 (92)
220 2yan_A Glutaredoxin-3; oxidore 97.6 7.5E-05 2.6E-09 58.1 5.7 65 54-135 8-77 (105)
221 2cq9_A GLRX2 protein, glutared 97.6 6.4E-05 2.2E-09 61.1 5.1 50 70-135 29-85 (130)
222 3c1r_A Glutaredoxin-1; oxidize 97.6 3.8E-05 1.3E-09 61.4 3.4 64 54-135 16-87 (118)
223 3a2v_A Probable peroxiredoxin; 97.6 5.2E-05 1.8E-09 68.8 4.7 93 66-168 34-160 (249)
224 3hd5_A Thiol:disulfide interch 97.6 0.00015 5.3E-09 62.2 7.4 42 66-117 25-66 (195)
225 2ht9_A Glutaredoxin-2; thiored 97.6 8.1E-05 2.8E-09 62.0 5.4 61 54-135 40-107 (146)
226 3qmx_A Glutaredoxin A, glutare 97.6 9.3E-05 3.2E-09 57.3 5.4 54 66-135 14-72 (99)
227 2klx_A Glutaredoxin; thioredox 97.6 7.4E-05 2.5E-09 56.0 4.6 52 69-136 7-61 (89)
228 2r2j_A Thioredoxin domain-cont 97.5 0.00088 3E-08 63.8 13.1 122 32-172 205-331 (382)
229 3ec3_A Protein disulfide-isome 97.5 0.00067 2.3E-08 60.9 10.8 117 46-181 6-126 (250)
230 2h8l_A Protein disulfide-isome 97.4 0.0009 3.1E-08 60.0 11.1 127 29-170 97-230 (252)
231 2h8l_A Protein disulfide-isome 97.4 0.0016 5.5E-08 58.3 12.3 115 46-180 6-123 (252)
232 2c0d_A Thioredoxin peroxidase 97.4 0.001 3.5E-08 58.9 10.2 103 66-182 56-197 (221)
233 2a4v_A Peroxiredoxin DOT5; yea 97.3 0.00087 3E-08 55.3 9.0 57 68-132 37-113 (159)
234 3ed3_A Protein disulfide-isome 97.3 0.0018 6E-08 59.9 11.9 122 29-171 126-268 (298)
235 1un2_A DSBA, thiol-disulfide i 97.3 6.4E-05 2.2E-09 65.6 1.8 56 53-119 101-159 (197)
236 2khp_A Glutaredoxin; thioredox 97.3 0.00027 9.1E-09 53.1 5.0 51 69-135 7-61 (92)
237 2pn8_A Peroxiredoxin-4; thiore 97.2 0.00053 1.8E-08 60.1 6.9 103 67-182 49-190 (211)
238 3ec3_A Protein disulfide-isome 97.2 0.0045 1.6E-07 55.4 13.2 125 32-172 102-230 (250)
239 3ixr_A Bacterioferritin comigr 97.2 0.001 3.5E-08 56.4 8.0 88 68-168 53-176 (179)
240 1fov_A Glutaredoxin 3, GRX3; a 97.2 0.00038 1.3E-08 50.7 4.6 50 70-135 3-56 (82)
241 1z6m_A Conserved hypothetical 97.1 0.002 6.7E-08 54.1 9.3 33 63-99 24-56 (175)
242 1n8j_A AHPC, alkyl hydroperoxi 97.1 0.0022 7.6E-08 54.7 9.6 101 68-182 32-170 (186)
243 4g2e_A Peroxiredoxin; redox pr 97.1 0.00026 9E-09 58.9 3.5 29 68-100 32-61 (157)
244 3nzn_A Glutaredoxin; structura 97.1 0.00094 3.2E-08 51.5 6.4 71 68-165 22-101 (103)
245 3rhb_A ATGRXC5, glutaredoxin-C 97.1 0.00048 1.6E-08 54.0 4.7 50 70-135 21-78 (113)
246 3gv1_A Disulfide interchange p 97.0 0.0018 6.1E-08 53.8 7.7 90 67-170 15-139 (147)
247 3me7_A Putative uncharacterize 97.0 0.0032 1.1E-07 52.8 9.0 92 67-170 29-162 (170)
248 2i3y_A Epididymal secretory gl 96.9 0.0084 2.9E-07 52.8 11.8 41 66-116 56-96 (215)
249 2znm_A Thiol:disulfide interch 96.9 0.003 1E-07 53.8 8.5 33 64-100 20-52 (195)
250 3qpm_A Peroxiredoxin; oxidored 96.9 0.006 2E-07 54.5 10.6 89 66-167 77-203 (240)
251 3msz_A Glutaredoxin 1; alpha-b 96.9 0.00065 2.2E-08 50.2 3.5 74 69-170 5-87 (89)
252 1wik_A Thioredoxin-like protei 96.8 0.0019 6.5E-08 50.4 5.9 65 54-135 6-75 (109)
253 1prx_A HORF6; peroxiredoxin, h 96.7 0.0031 1.1E-07 55.8 7.2 106 67-182 33-182 (224)
254 3h8q_A Thioredoxin reductase 3 96.7 0.0018 6E-08 51.1 4.7 62 54-136 8-76 (114)
255 3ctg_A Glutaredoxin-2; reduced 96.6 0.00078 2.7E-08 54.7 2.4 64 54-135 28-99 (129)
256 2rem_A Disulfide oxidoreductas 96.6 0.016 5.3E-07 49.1 10.6 41 66-116 25-65 (193)
257 2r37_A Glutathione peroxidase 96.6 0.013 4.4E-07 51.1 10.2 40 67-116 39-78 (207)
258 3tjj_A Peroxiredoxin-4; thiore 96.5 0.012 4.2E-07 53.1 9.8 89 66-167 91-217 (254)
259 4gqc_A Thiol peroxidase, perox 96.5 0.00053 1.8E-08 57.6 0.7 90 68-170 35-160 (164)
260 2ec4_A FAS-associated factor 1 96.5 0.03 1E-06 47.9 11.7 121 36-169 21-167 (178)
261 4hde_A SCO1/SENC family lipopr 96.5 0.021 7.2E-07 47.8 10.5 44 67-117 33-77 (170)
262 2wfc_A Peroxiredoxin 5, PRDX5; 96.4 0.0055 1.9E-07 51.5 6.5 30 68-101 33-64 (167)
263 3hz8_A Thiol:disulfide interch 96.4 0.0046 1.6E-07 53.2 6.0 43 67-119 25-67 (193)
264 2v2g_A Peroxiredoxin 6; oxidor 96.4 0.0048 1.6E-07 55.1 6.2 105 68-182 31-178 (233)
265 1tp9_A Peroxiredoxin, PRX D (t 96.4 0.0053 1.8E-07 51.0 6.0 30 68-101 37-68 (162)
266 1nm3_A Protein HI0572; hybrid, 96.3 0.0068 2.3E-07 53.6 7.0 30 68-101 35-66 (241)
267 2yzh_A Probable thiol peroxida 96.3 0.0062 2.1E-07 50.7 6.1 30 66-99 47-77 (171)
268 2pwj_A Mitochondrial peroxired 96.3 0.0036 1.2E-07 52.8 4.6 57 67-132 45-107 (171)
269 1q98_A Thiol peroxidase, TPX; 96.2 0.0063 2.2E-07 50.5 5.8 29 67-99 44-73 (165)
270 1xcc_A 1-Cys peroxiredoxin; un 96.2 0.004 1.4E-07 55.0 4.7 106 67-182 33-179 (220)
271 3p7x_A Probable thiol peroxida 96.2 0.0054 1.8E-07 50.9 5.3 90 68-167 48-165 (166)
272 1psq_A Probable thiol peroxida 96.2 0.0069 2.4E-07 50.1 5.7 29 67-99 43-72 (163)
273 3q6o_A Sulfhydryl oxidase 1; p 96.0 0.048 1.6E-06 48.1 10.8 101 49-171 141-241 (244)
274 3uma_A Hypothetical peroxiredo 95.8 0.0093 3.2E-07 51.1 5.2 43 67-118 58-102 (184)
275 3l9v_A Putative thiol-disulfid 95.8 0.0036 1.2E-07 53.7 2.3 42 67-118 15-59 (189)
276 3zrd_A Thiol peroxidase; oxido 95.5 0.018 6.3E-07 49.7 5.8 29 67-99 79-108 (200)
277 3mng_A Peroxiredoxin-5, mitoch 95.2 0.024 8.3E-07 48.0 5.5 56 68-132 46-107 (173)
278 3l4n_A Monothiol glutaredoxin- 95.0 0.036 1.2E-06 44.7 5.5 65 54-136 5-76 (127)
279 1aba_A Glutaredoxin; electron 94.7 0.049 1.7E-06 40.2 5.4 55 70-136 2-70 (87)
280 2wci_A Glutaredoxin-4; redox-a 94.7 0.031 1.1E-06 45.6 4.6 57 68-136 36-96 (135)
281 2ct6_A SH3 domain-binding glut 94.5 0.06 2E-06 42.0 5.7 51 70-136 10-78 (111)
282 3t58_A Sulfhydryl oxidase 1; o 94.4 0.22 7.5E-06 49.5 10.9 103 48-172 140-242 (519)
283 3zyw_A Glutaredoxin-3; metal b 94.4 0.032 1.1E-06 43.7 3.8 55 70-136 18-77 (111)
284 1t1v_A SH3BGRL3, SH3 domain-bi 94.2 0.073 2.5E-06 39.8 5.4 51 70-136 4-66 (93)
285 3ipz_A Monothiol glutaredoxin- 94.2 0.036 1.2E-06 43.1 3.8 56 68-136 19-79 (109)
286 2axo_A Hypothetical protein AT 94.1 0.097 3.3E-06 47.7 6.9 77 68-167 44-140 (270)
287 1nm3_A Protein HI0572; hybrid, 93.8 0.095 3.2E-06 46.1 6.2 53 68-136 170-225 (241)
288 2wem_A Glutaredoxin-related pr 93.3 0.076 2.6E-06 42.1 4.2 55 70-136 22-82 (118)
289 3gx8_A Monothiol glutaredoxin- 93.2 0.24 8.4E-06 39.2 7.1 59 69-136 18-80 (121)
290 3feu_A Putative lipoprotein; a 92.7 0.039 1.3E-06 47.0 1.7 39 67-117 23-61 (185)
291 3l9s_A Thiol:disulfide interch 92.0 0.083 2.8E-06 45.2 2.9 41 67-117 22-65 (191)
292 1u6t_A SH3 domain-binding glut 91.1 0.45 1.5E-05 38.0 6.2 58 69-136 1-70 (121)
293 4dvc_A Thiol:disulfide interch 90.0 0.46 1.6E-05 39.1 5.7 30 67-100 22-51 (184)
294 3sbc_A Peroxiredoxin TSA1; alp 89.3 0.95 3.3E-05 39.7 7.4 92 66-167 52-178 (216)
295 4f82_A Thioredoxin reductase; 89.0 0.7 2.4E-05 39.2 6.1 31 67-101 49-80 (176)
296 3keb_A Probable thiol peroxida 87.1 0.67 2.3E-05 40.9 4.9 24 68-95 50-79 (224)
297 3gha_A Disulfide bond formatio 86.2 1.1 3.7E-05 38.4 5.8 51 60-118 23-74 (202)
298 3c7m_A Thiol:disulfide interch 85.6 1.1 3.7E-05 37.3 5.3 41 67-117 18-59 (195)
299 2wul_A Glutaredoxin related pr 84.2 1.8 6.1E-05 34.2 5.7 67 54-136 11-82 (118)
300 3f4s_A Alpha-DSBA1, putative u 81.3 2.2 7.4E-05 37.3 5.6 44 67-118 40-84 (226)
301 3bci_A Disulfide bond protein 80.6 2.3 7.8E-05 35.3 5.3 43 67-117 12-55 (186)
302 3tue_A Tryparedoxin peroxidase 78.8 1.4 4.9E-05 38.7 3.5 31 67-101 57-88 (219)
303 3gmf_A Protein-disulfide isome 77.5 4.3 0.00015 34.8 6.3 47 63-117 12-59 (205)
304 4eo3_A Bacterioferritin comigr 76.0 4.8 0.00017 37.1 6.5 87 68-168 26-137 (322)
305 3gn3_A Putative protein-disulf 75.6 2.6 9E-05 35.5 4.3 40 68-116 16-55 (182)
306 2in3_A Hypothetical protein; D 74.3 1.9 6.6E-05 36.6 3.1 47 117-169 163-209 (216)
307 2x8g_A Thioredoxin glutathione 72.0 2.6 8.9E-05 42.0 3.9 62 54-136 9-77 (598)
308 2jad_A Yellow fluorescent prot 71.4 1.8 6.3E-05 40.9 2.4 56 70-136 263-324 (362)
309 3tdg_A DSBG, putative uncharac 71.1 2.1 7.4E-05 38.8 2.7 27 67-97 148-174 (273)
310 2kok_A Arsenate reductase; bru 65.2 12 0.0004 29.1 5.6 43 70-128 7-56 (120)
311 1xiy_A Peroxiredoxin, pfaop; a 65.1 14 0.00047 31.1 6.5 31 68-101 45-77 (182)
312 3kzq_A Putative uncharacterize 56.0 7.3 0.00025 32.9 3.1 45 119-169 158-202 (208)
313 3bci_A Disulfide bond protein 53.6 8.5 0.00029 31.7 3.1 40 119-169 138-177 (186)
314 3f4s_A Alpha-DSBA1, putative u 48.9 13 0.00045 32.2 3.7 51 119-170 159-211 (226)
315 1t4y_A Adaptive-response senso 44.4 1E+02 0.0036 23.5 9.6 76 81-167 21-96 (105)
316 2xhf_A Peroxiredoxin 5; oxidor 43.5 37 0.0013 28.1 5.5 54 68-129 44-101 (171)
317 1z3e_A Regulatory protein SPX; 43.3 14 0.00047 29.2 2.7 34 70-119 3-36 (132)
318 3gha_A Disulfide bond formatio 43.3 16 0.00055 30.8 3.3 42 119-171 152-193 (202)
319 1un2_A DSBA, thiol-disulfide i 37.9 14 0.00046 31.3 1.9 19 118-136 38-56 (197)
320 1rw1_A Conserved hypothetical 37.4 18 0.00063 27.6 2.5 34 70-119 2-35 (114)
321 3l78_A Regulatory protein SPX; 36.6 22 0.00074 27.6 2.8 81 70-168 2-86 (120)
322 3gmf_A Protein-disulfide isome 35.8 22 0.00074 30.3 2.9 41 119-170 156-197 (205)
323 3gn3_A Putative protein-disulf 34.1 14 0.00049 30.8 1.4 38 120-165 144-181 (182)
324 4dvc_A Thiol:disulfide interch 33.9 31 0.0011 27.6 3.5 18 119-136 139-156 (184)
325 3hz8_A Thiol:disulfide interch 33.7 29 0.001 28.8 3.4 39 119-168 143-181 (193)
326 3c7m_A Thiol:disulfide interch 31.6 21 0.00072 29.1 2.1 42 119-169 151-193 (195)
327 3feu_A Putative lipoprotein; a 31.1 32 0.0011 28.4 3.1 42 119-169 141-183 (185)
328 2imf_A HCCA isomerase, 2-hydro 29.0 40 0.0014 28.0 3.5 41 116-167 153-193 (203)
329 3fz4_A Putative arsenate reduc 27.4 44 0.0015 25.8 3.2 35 69-119 4-38 (120)
330 3vhs_A ATPase wrnip1; zinc fin 23.6 4 0.00014 23.2 -2.6 13 79-91 6-18 (29)
331 3fz5_A Possible 2-hydroxychrom 22.1 61 0.0021 27.0 3.3 38 119-167 162-199 (202)
332 3gl5_A Putative DSBA oxidoredu 21.2 75 0.0025 27.4 3.8 42 119-170 172-213 (239)
No 1
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=100.00 E-value=4e-34 Score=249.38 Aligned_cols=150 Identities=18% Similarity=0.295 Sum_probs=127.6
Q ss_pred HHHHHHHHhhhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCC---CCCccchhhHHHHHHHHHHcccccCCCCcE
Q psy8428 33 GDRVLHLSEMNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQ---RNCHICVSASDEYTIVANSFRYSQMYSNKL 109 (328)
Q Consensus 33 ~~~~~~L~~l~~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~---~~C~~C~~~~pef~~vA~s~~~~~~~~~~v 109 (328)
.+++++|++++++++||+||++||++++ .++|+|+++|+|||++|+ .||++|+++.|+|+++|++|.++++. +++
T Consensus 5 ~~~~~~l~~l~~~~~vi~lt~~nF~~~v-~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~-~~v 82 (178)
T 3ga4_A 5 SHNIDDILQLKDDTGVITVTADNYPLLS-RGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQ-SLN 82 (178)
T ss_dssp ---CHHHHTTCCTTSEEECCTTTHHHHT-TCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTT-CCE
T ss_pred hhhHHHHHHhhccCCCEECCHHHHHHHH-cccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCC-CCE
Confidence 4788999999999999999999999987 478999999999997765 69999999999999999999743332 579
Q ss_pred EEEEEECcCChhhHHHcCCCcCceEEEecCCCCCC---------CCCceeeeec-ccCHHHHHHHHHhhcCCcceeeCCC
Q psy8428 110 FFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPK---------PSDTLDIQRV-GYSAEAIVKWIADRTDIQIRVFRPP 179 (328)
Q Consensus 110 ~F~~vD~~~~~~lf~~l~v~svP~l~~f~p~g~~~---------~~~~~~~~~~-~~~a~~l~~fl~~~t~~~i~i~~p~ 179 (328)
+|++||+|++++++++|||+++||+++|++|+++. +.++|++..+ ++++++|++||+++|+++++|.||+
T Consensus 83 ~f~kvD~d~~~~la~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~I~rp~ 162 (178)
T 3ga4_A 83 LFFTVDVNEVPQLVKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISITVPQAF 162 (178)
T ss_dssp EEEEEETTTCHHHHHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCCCCCSC
T ss_pred EEEEEECccCHHHHHHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCccccCCC
Confidence 99999999999999999999999999999985433 2356777666 8999999999999999999999999
Q ss_pred CCchh
Q psy8428 180 NYSGP 184 (328)
Q Consensus 180 ~~~~~ 184 (328)
||+.-
T Consensus 163 ny~~~ 167 (178)
T 3ga4_A 163 NVQEE 167 (178)
T ss_dssp C----
T ss_pred ChHHh
Confidence 99853
No 2
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.80 E-value=2.4e-19 Score=149.43 Aligned_cols=110 Identities=11% Similarity=0.097 Sum_probs=93.2
Q ss_pred hhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCC--ccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC
Q psy8428 42 MNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNC--HICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG 119 (328)
Q Consensus 42 l~~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C--~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~ 119 (328)
+..+.|..++|++||++.+.++ +-+++|+|||+ || ++|+.+.|.++++|++|. +++.|+++|+|++
T Consensus 11 l~~~~g~~~vt~~~F~~~v~~~--~~~vlVdF~A~----wCr~gpCk~iaPvleela~e~~------~~v~~~KVdvDe~ 78 (137)
T 2qsi_A 11 AARPNAPTLVDEATVDDFIAHS--GKIVVLFFRGD----AVRFPEAADLAVVLPELINAFP------GRLVAAEVAAEAE 78 (137)
T ss_dssp ------CEEECTTTHHHHHHTS--SSEEEEEECCC----TTTCTTHHHHHHHHHHHHHTST------TTEEEEEECGGGH
T ss_pred HHHhcCCcccCHhHHHHHHhcC--CCcEEEEEeCC----ccCCCchhhHHhHHHHHHHHcc------CCcEEEEEECCCC
Confidence 4456788899999999998633 23699999999 99 999999999999999985 5799999999999
Q ss_pred hhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 120 SDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 120 ~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
+++.++|||+++||+++|++| +..+...|..+.+++.+||++.+
T Consensus 79 ~~la~~ygV~siPTlilFkdG------~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 79 RGLMARFGVAVCPSLAVVQPE------RTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp HHHHHHHTCCSSSEEEEEECC------EEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCccCCEEEEEECC------EEEEEEeCCCCHHHHHHHHHHHh
Confidence 999999999999999999987 44666678888999999998876
No 3
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.80 E-value=1.7e-19 Score=150.79 Aligned_cols=107 Identities=6% Similarity=0.071 Sum_probs=94.8
Q ss_pred hCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCC--CccchhhHHHHHHHHHHcccccCCCCc-EEEEEEECcCCh
Q psy8428 44 AKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRN--CHICVSASDEYTIVANSFRYSQMYSNK-LFFILVDFDEGS 120 (328)
Q Consensus 44 ~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~--C~~C~~~~pef~~vA~s~~~~~~~~~~-v~F~~vD~~~~~ 120 (328)
.+ |+.++|++||++.+. + +-.++|+|||+ | |++|+.+.|.++++|++|. ++ +.|+++|+|+++
T Consensus 16 ~~-g~~~~t~~~F~~~v~-~--~~~vlVdF~a~----~crCgpCk~iaPvleela~e~~------g~~v~~~KVdvDe~~ 81 (140)
T 2qgv_A 16 AR-GWTPVSESRLDDWLT-Q--APDGVVLLSSD----PKRTPEVSDNPVMIGELLHEFP------DYTWQVAIADLEQSE 81 (140)
T ss_dssp HT-TCEECCHHHHHHHHH-T--CSSEEEEECCC----TTTCTTTTHHHHHHHHHHTTCT------TSCCEEEECCHHHHH
T ss_pred hc-CCccCCHHHHHHHHh-C--CCCEEEEEeCC----cccCCcHHHHHhHHHHHHHHcC------CCeEEEEEEECCCCH
Confidence 44 999999999999985 3 34689999999 9 9999999999999999985 57 999999999999
Q ss_pred hhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 121 DVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 121 ~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
++.++|||+++||+++|++| +..+...|..+.+++.+||++.+.
T Consensus 82 ~lA~~ygV~sIPTlilFk~G------~~v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 82 AIGDRFGAFRFPATLVFTGG------NYRGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp HHHHHHTCCSSSEEEEEETT------EEEEEEESCCCHHHHHHHHHHHHC
T ss_pred HHHHHcCCccCCEEEEEECC------EEEEEEecCCCHHHHHHHHHHHhc
Confidence 99999999999999999987 345666677889999999998774
No 4
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.79 E-value=1.4e-18 Score=141.36 Aligned_cols=114 Identities=10% Similarity=0.122 Sum_probs=94.8
Q ss_pred hCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhH
Q psy8428 44 AKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (328)
Q Consensus 44 ~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (328)
..+.|++|++++|++.+.+. +..++|.|||+ ||++|+.+.|+|+++|+.+... ...+++.|+++|++++++++
T Consensus 13 ~~~~v~~l~~~~f~~~~~~~--~~~vlv~F~a~----wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~~~vd~~~~~~l~ 85 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVMDP--EKDVFVLYYVP----WSRHSVAAMRLWDDLSMSQSQK-RNHLTFVAARIDGEKYPDVI 85 (127)
T ss_dssp CCCCCEECCTTTHHHHHTCT--TCEEEEEEECT----TCHHHHHHHHHHHHHHHHHHTS-TTTTTEEEEEEETTTCHHHH
T ss_pred CCCceEECChhhHHHHHhCC--CCCEEEEEECC----ccHHHHHHhHHHHHHHHHHHhc-ccCCCeEEEEEEccccHhHH
Confidence 35679999999999998532 45799999999 9999999999999999987531 22357999999999999999
Q ss_pred HHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhh
Q psy8428 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (328)
Q Consensus 124 ~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~ 168 (328)
++|+|+++||+++|++|++. ....+ .|+++.++|.+||++.
T Consensus 86 ~~~~v~~~Pt~~~~~~g~~~---~~~~~-~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 86 ERMRVSGFPTMRYYTRIDKQ---EPFEY-SGQRYLSLVDSFVFQN 126 (127)
T ss_dssp HHTTCCSSSEEEEECSSCSS---SCEEC-CSCCCHHHHHHHHHHH
T ss_pred HhcCCccCCEEEEEeCCCCC---CceEe-cCCccHHHHHHHHHhc
Confidence 99999999999999987432 11222 4788999999999875
No 5
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.78 E-value=1.6e-18 Score=137.87 Aligned_cols=102 Identities=19% Similarity=0.357 Sum_probs=85.9
Q ss_pred eEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHc
Q psy8428 48 VLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (328)
Q Consensus 48 VI~L~~-~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l 126 (328)
|.++++ ++|++.+.+. .+..++|.|||+ ||++|+.+.|.++++|+.+. ++.|+++|++++++++++|
T Consensus 2 V~~i~~~~~f~~~l~~~-~~k~vvv~F~a~----wC~~C~~~~p~~~~~~~~~~-------~~~~~~vd~d~~~~l~~~~ 69 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEA-GNKLVVIDFYAT----WCGPCKMIAPKLEELSQSMS-------DVVFLKVDVDECEDIAQDN 69 (105)
T ss_dssp CEECCSHHHHHHHHHHT-TTSEEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TEEEEEEETTTCHHHHHHT
T ss_pred eEEeCCHHHHHHHHHhc-CCCEEEEEEECC----CCCCccCCCcchhhhhhccC-------CeEEEEEecccCHHHHHHc
Confidence 466765 7899988533 456799999999 99999999999999998873 5899999999999999999
Q ss_pred CCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhh
Q psy8428 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (328)
Q Consensus 127 ~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~ 168 (328)
+|+++||+++|+.| ...+.. .|.+.++|.+||+++
T Consensus 70 ~V~~~PT~~~~~~G------~~v~~~-~G~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 70 QIACMPTFLFMKNG------QKLDSL-SGANYDKLLELVEKN 104 (105)
T ss_dssp TCCBSSEEEEEETT------EEEEEE-ESCCHHHHHHHHHHH
T ss_pred CCCeecEEEEEECC------EEEEEE-eCcCHHHHHHHHHhc
Confidence 99999999999876 233433 347899999999875
No 6
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.75 E-value=1.1e-17 Score=131.69 Aligned_cols=108 Identities=19% Similarity=0.376 Sum_probs=92.8
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (328)
..+++++|+++|++.+.+. +..++|+|||+ ||++|+.+.|.++++++.+. +++.|+++|+++++++++
T Consensus 3 ~~~v~~l~~~~~~~~~~~~--~~~vlv~f~a~----~C~~C~~~~~~~~~~~~~~~------~~v~~~~vd~~~~~~l~~ 70 (111)
T 3gnj_A 3 AMSLEKLDTNTFEQLIYDE--GKACLVMFSRK----NCHVCQKVTPVLEELRLNYE------ESFGFYYVDVEEEKTLFQ 70 (111)
T ss_dssp CCCSEECCHHHHHHHHTTS--CCCEEEEEECS----SCHHHHHHHHHHHHHHHHTT------TTSEEEEEETTTCHHHHH
T ss_pred CCcceecCHHHHHHHHHhc--CCEEEEEEeCC----CChhHHHHHHHHHHHHHHcC------CceEEEEEECCcChhHHH
Confidence 3569999999999998433 45799999999 99999999999999999885 469999999999999999
Q ss_pred HcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 125 ~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
+|+++++|++++|++| .......|..+.+++.+||++.++
T Consensus 71 ~~~v~~~Pt~~~~~~g------~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 71 RFSLKGVPQILYFKDG------EYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp HTTCCSSCEEEEEETT------EEEEEEESSCCHHHHHHHHHHHHH
T ss_pred hcCCCcCCEEEEEECC------EEEEEEeccCCHHHHHHHHHHHhc
Confidence 9999999999999765 233444577899999999998754
No 7
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.74 E-value=2.6e-17 Score=129.10 Aligned_cols=107 Identities=11% Similarity=0.221 Sum_probs=91.1
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
++|+++++++|++.+.+ ++..++|+||++ ||++|+.+.|.++++++.+. +++.|+.+|++++++++++
T Consensus 2 ~~v~~l~~~~f~~~~~~--~~~~~~v~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~~~v~~~~~~~~~~~ 69 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLK--ADGAILVDFWAE----WCGPCKMIAPILDEIADEYQ------GKLTVAKLNIDQNPGTAPK 69 (108)
T ss_dssp TTEEECCTTTHHHHTTT--CSSEEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTEEEEEEETTTCTTHHHH
T ss_pred CcceecchhhHHHHHHh--cCCeEEEEEECC----CCHhHHHHHHHHHHHHHHhC------CCcEEEEEECCCCHHHHHH
Confidence 57999999999987643 355799999999 99999999999999999885 4699999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
|+++++|++++|+.| .......|..+.+++.+|+++.++
T Consensus 70 ~~v~~~Pt~~~~~~G------~~~~~~~G~~~~~~l~~~l~~~l~ 108 (108)
T 2trx_A 70 YGIRGIPTLLLFKNG------EVAATKVGALSKGQLKEFLDANLA 108 (108)
T ss_dssp TTCCSSSEEEEEETT------EEEEEEESCCCHHHHHHHHHHHHC
T ss_pred cCCcccCEEEEEeCC------EEEEEEecCCCHHHHHHHHHHhhC
Confidence 999999999999654 223334567789999999988753
No 8
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.74 E-value=2.3e-17 Score=136.03 Aligned_cols=112 Identities=17% Similarity=0.301 Sum_probs=93.5
Q ss_pred hhCCCeEEeChhhHHHHHHcCC---------CCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEE
Q psy8428 43 NAKKAVLRFDGQKYKEYIKNGP---------RNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFIL 113 (328)
Q Consensus 43 ~~~~~VI~L~~~nf~~~v~~~~---------r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~ 113 (328)
...++++++++++|++.+.+.. ++..++|+|||+ ||++|+.+.|.++++++.+. +++.|+.
T Consensus 19 ~~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~----wC~~C~~~~~~~~~~~~~~~------~~~~~~~ 88 (141)
T 3hxs_A 19 KPQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYAD----WCGPCKMVAPILEELSKEYA------GKIYIYK 88 (141)
T ss_dssp ----CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECT----TCTTHHHHHHHHHHHHHHTT------TTCEEEE
T ss_pred CCCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECC----CCHHHHHHHHHHHHHHHHhc------CceEEEE
Confidence 3456799999999999885422 356799999999 99999999999999999885 4699999
Q ss_pred EECcCChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 114 VDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 114 vD~~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
+|++++++++++|+++++|++++|.++|+. . ...|..+.+++.+||++.+.
T Consensus 89 v~~~~~~~~~~~~~v~~~Pt~~~~~~~g~~-----~-~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 89 VNVDKEPELARDFGIQSIPTIWFVPMKGEP-----Q-VNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp EETTTCHHHHHHTTCCSSSEEEEECSSSCC-----E-EEESCCCHHHHHHHHHHTTC
T ss_pred EECCCCHHHHHHcCCCCcCEEEEEeCCCCE-----E-EEeCCCCHHHHHHHHHHHHc
Confidence 999999999999999999999999776432 2 33577899999999998865
No 9
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.73 E-value=7.9e-18 Score=142.91 Aligned_cols=120 Identities=18% Similarity=0.159 Sum_probs=93.0
Q ss_pred eEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHc
Q psy8428 48 VLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (328)
Q Consensus 48 VI~L~~-~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l 126 (328)
+.+|++ ++|++.+.+ ..+-.|+|.|||+ ||+||+.+.|.++++|+.+. +++.|+++|+|+++++.++|
T Consensus 23 v~~l~t~~~f~~~v~~-~~~k~VVVdF~A~----WCgPCk~m~PvleelA~e~~------~~v~f~kVDVDe~~e~a~~y 91 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVN-EDERLVCIRFGHD----YDPDCMKMDELLYKVADDIK------NFCVIYLVDITEVPDFNTMY 91 (160)
T ss_dssp CEECCSHHHHHHHHHH-CSSSEEEEEEECT----TSHHHHHHHHHHHHHHHHHT------TTEEEEEEETTTCCTTTTTT
T ss_pred hhccCCHHHHHHHHHh-cCCCEEEEEEECC----CChhHHHHHHHHHHHHHHcc------CCcEEEEEECCCCHHHHHHc
Confidence 667776 799988863 1245799999999 99999999999999999985 56999999999999999999
Q ss_pred CCCcCceEEEecCCCCCCCCCcee-------eeecccC-HHHHHHHHHhhcC----CcceeeCCCCCc
Q psy8428 127 RLNTAPIFMHFPAKGKPKPSDTLD-------IQRVGYS-AEAIVKWIADRTD----IQIRVFRPPNYS 182 (328)
Q Consensus 127 ~v~svP~l~~f~p~g~~~~~~~~~-------~~~~~~~-a~~l~~fl~~~t~----~~i~i~~p~~~~ 182 (328)
+|+++||+++|..|+.. ..+ ...|..+ .++|.++|++... -.--+..|.||+
T Consensus 92 ~V~siPT~~fFk~G~~v----~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~a~~g~~~v~~p~~~~ 155 (160)
T 2av4_A 92 ELYDPVSVMFFYRNKHM----MIDLGTGNNNKINWPMNNKQEFIDIVETIFRGARKGRGLVISPKDYS 155 (160)
T ss_dssp TCCSSEEEEEEETTEEE----EEECSSSCCSCBCSCCCCHHHHHHHHHHHHHHHHTTCSEEECSSCC-
T ss_pred CCCCCCEEEEEECCEEE----EEecCCCCcCeEEeecCCHHHHHHHHHHHHHHhhcCCeEEECCCccc
Confidence 99999999999987211 002 2235555 8899999876543 112345678886
No 10
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.72 E-value=6.9e-17 Score=126.10 Aligned_cols=106 Identities=14% Similarity=0.256 Sum_probs=90.3
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
++|+++++++|++.+.+ ++..++++|+++ ||++|+.+.|+++++++.+. +++.|+.+|++++++++++
T Consensus 2 ~~v~~l~~~~~~~~~~~--~~~~~lv~f~~~----~C~~C~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~ 69 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLK--ASGLVLVDFWAE----WCGPCKMIGPALGEIGKEFA------GKVTVAKVNIDDNPETPNA 69 (107)
T ss_dssp CCEEECCTTTHHHHTTT--CSSEEEEEEECT----TCHHHHHHHHHHHHHHHHHT------TSEEEEEEETTTCCHHHHH
T ss_pred CceeecchhhhhHHHHh--CCCEEEEEEECC----CChhHHHHhHHHHHHHHHhC------CcEEEEEEECCCCHHHHHh
Confidence 57999999999988642 355799999999 99999999999999999885 4699999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
++++++|++++|+.| + ......|..+.+++.+||++.+
T Consensus 70 ~~v~~~Pt~~~~~~G-~-----~~~~~~G~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 70 YQVRSIPTLMLVRDG-K-----VIDKKVGALPKSQLKAWVESAQ 107 (107)
T ss_dssp TTCCSSSEEEEEETT-E-----EEEEEESCCCHHHHHHHHHHTC
T ss_pred cCCCccCEEEEEeCC-E-----EEEEecCCCCHHHHHHHHHhcC
Confidence 999999999999654 2 2333456778999999998753
No 11
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.72 E-value=5.4e-17 Score=126.46 Aligned_cols=105 Identities=14% Similarity=0.210 Sum_probs=90.5
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (328)
..+++++|+++|++.+ + +..++++|||+ ||++|+.+.|+++++++.+. +++.|+.+|+++++++++
T Consensus 2 ~~~v~~l~~~~~~~~~--~--~~~~lv~f~~~----~C~~C~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~ 67 (106)
T 3die_A 2 HMAIVKVTDADFDSKV--E--SGVQLVDFWAT----ACGPCKMIAPVLEELAADYE------GKADILKLDVDENPSTAA 67 (106)
T ss_dssp CCCCEECCTTTHHHHS--C--SSEEEEEEECS----BCHHHHHHHHHHHHHHHHTT------TTCEEEEEETTTCHHHHH
T ss_pred CcceEECCHHHHHHHh--c--CCcEEEEEECC----CCHHHHHHhHHHHHHHHHhc------CCcEEEEEECCcCHHHHH
Confidence 3579999999999987 2 45799999999 99999999999999999985 459999999999999999
Q ss_pred HcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 125 ~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
+|+++++|++++|+.| .......|..+.+++.+||++.+
T Consensus 68 ~~~v~~~Pt~~~~~~G------~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 68 KYEVMSIPTLIVFKDG------QPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp HTTCCSBSEEEEEETT------EEEEEEESCCCHHHHHHHHHTTC
T ss_pred hCCCcccCEEEEEeCC------eEEEEEeCCCCHHHHHHHHHHhC
Confidence 9999999999999865 23344457788999999998753
No 12
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.72 E-value=7.7e-17 Score=128.14 Aligned_cols=106 Identities=12% Similarity=0.132 Sum_probs=91.3
Q ss_pred CeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHc
Q psy8428 47 AVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (328)
Q Consensus 47 ~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l 126 (328)
+++++|+++|++.+ + +..++|+|||+ ||++|+.+.|+++++++.+. +++.|+.+|++++++++++|
T Consensus 2 ~v~~l~~~~~~~~~-~---~~~~lv~f~a~----wC~~C~~~~~~l~~~~~~~~------~~v~~~~vd~~~~~~l~~~~ 67 (112)
T 2voc_A 2 AIVKATDQSFSAET-S---EGVVLADFWAP----WCGPSKMIAPVLEELDQEMG------DKLKIVKIDVDENQETAGKY 67 (112)
T ss_dssp CCEECCTTTHHHHH-S---SSEEEEEEECT----TBGGGGGHHHHHHHHHHHHT------TTCEEEEEETTTCCSHHHHT
T ss_pred CeEEecHHHHHHHh-C---CCEEEEEEECC----CCHHHHHHHHHHHHHHHHhC------CCcEEEEEECCCCHHHHHHc
Confidence 47899999999987 2 44799999999 99999999999999999885 46999999999999999999
Q ss_pred CCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc
Q psy8428 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 127 ~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~ 172 (328)
+++++|++++|+.| + ......|..+.+++.+|+++.++.+
T Consensus 68 ~v~~~Pt~~~~~~G-~-----~~~~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 68 GVMSIPTLLVLKDG-E-----VVETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp TCCSBSEEEEEETT-E-----EEEEEESCCCHHHHHHHHHTTSCSC
T ss_pred CCCcccEEEEEeCC-E-----EEEEEeCCCCHHHHHHHHHHHHHhh
Confidence 99999999999654 2 2333457789999999999987744
No 13
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.72 E-value=6.9e-17 Score=126.91 Aligned_cols=106 Identities=11% Similarity=0.197 Sum_probs=90.5
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
+.++++|+++|++.+. +..++|+|||+ ||++|+.+.|+++++++.+.. ..+++.|+.+|++++++++++
T Consensus 5 ~~v~~l~~~~~~~~~~----~~~~lv~f~~~----~C~~C~~~~~~~~~~~~~~~~---~~~~~~~~~vd~~~~~~l~~~ 73 (111)
T 3uvt_A 5 STVLALTENNFDDTIA----EGITFIKFYAP----WCGHCKTLAPTWEELSKKEFP---GLAGVKIAEVDCTAERNICSK 73 (111)
T ss_dssp CCSEECCTTTHHHHHH----SSEEEEEEECS----SCHHHHHHHHHHHHHHTCCCC---C-CCEEEEEEETTTCHHHHHH
T ss_pred CcceEcChhhHHHHhc----CCcEEEEEECC----CChhHHHhhHHHHHHHHHhhc---cCCceEEEEEeccccHhHHHh
Confidence 5799999999999985 33689999999 999999999999999988742 124699999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhh
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~ 168 (328)
|+++++|++++|++| .......|..+.+++.+|++++
T Consensus 74 ~~v~~~Pt~~~~~~g------~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 74 YSVRGYPTLLLFRGG------KKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp TTCCSSSEEEEEETT------EEEEEECSCCSHHHHHHHHHHH
T ss_pred cCCCcccEEEEEeCC------cEEEeccCCcCHHHHHHHHHhc
Confidence 999999999999776 2233445778999999999875
No 14
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.72 E-value=9.5e-17 Score=126.90 Aligned_cols=109 Identities=15% Similarity=0.290 Sum_probs=92.1
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (328)
.++|+++++++|++.+.+ ++..++|.|+++ ||++|+.+.|.++++++.+. +++.|+.+|+++++++++
T Consensus 6 ~~~v~~l~~~~~~~~~~~--~~~~~lv~f~~~----~C~~C~~~~~~l~~~~~~~~------~~v~~~~v~~~~~~~~~~ 73 (115)
T 1thx_A 6 SKGVITITDAEFESEVLK--AEQPVLVYFWAS----WCGPCQLMSPLINLAANTYS------DRLKVVKLEIDPNPTTVK 73 (115)
T ss_dssp CCSEEECCGGGHHHHTTT--CSSCEEEEEECT----TCTTHHHHHHHHHHHHHHTT------TTCEEEEEESTTCHHHHH
T ss_pred cCceEEeeccchhhHhhc--CCceEEEEEECC----CCHHHHHhHHHHHHHHHHhC------CcEEEEEEEcCCCHHHHH
Confidence 467999999999988642 355799999999 99999999999999999885 469999999999999999
Q ss_pred HcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCC
Q psy8428 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (328)
Q Consensus 125 ~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~ 171 (328)
+|+++++|++++|+.| + ......|..+.+++.+|+++.++.
T Consensus 74 ~~~v~~~Pt~~~~~~G-~-----~~~~~~g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 74 KYKVEGVPALRLVKGE-Q-----ILDSTEGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp HTTCCSSSEEEEEETT-E-----EEEEEESCCCHHHHHHHHHHHHC-
T ss_pred HcCCCceeEEEEEcCC-E-----EEEEecCCCCHHHHHHHHHHHhcC
Confidence 9999999999999654 2 233335677899999999988653
No 15
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.71 E-value=1.1e-16 Score=125.13 Aligned_cols=106 Identities=18% Similarity=0.233 Sum_probs=91.8
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (328)
.+.++.+|+++|++.+.+ +..++|+|||+ ||++|+.+.|.++++++.+. +++.|+.+|+++++++++
T Consensus 3 ~~~v~~l~~~~~~~~~~~---~~~~lv~f~~~----~C~~C~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~ 69 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIRN---NKLVLVDCWAE----WCAPCHLYEPIYKKVAEKYK------GKAVFGRLNVDENQKIAD 69 (109)
T ss_dssp CCCCEECCTTTHHHHHHH---SSEEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTSEEEEEETTTCHHHHH
T ss_pred CCeEEEecHHHHHHHHhc---CCeEEEEEECC----CCHHHHhhhHHHHHHHHHhC------CCceEEEEccccCHHHHH
Confidence 467999999999998753 45799999999 99999999999999999885 469999999999999999
Q ss_pred HcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 125 ~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
+|+++++|++++|++| .......|..+.+++.+++++.+
T Consensus 70 ~~~i~~~Pt~~~~~~g------~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 70 KYSVLNIPTTLIFVNG------QLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp HTTCCSSSEEEEEETT------EEEEEEESCCCHHHHHHHHHHHC
T ss_pred hcCcccCCEEEEEcCC------cEEEeeeccCCHHHHHHHHHHHh
Confidence 9999999999999665 23344457789999999998875
No 16
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.71 E-value=7.4e-17 Score=132.03 Aligned_cols=107 Identities=10% Similarity=0.182 Sum_probs=91.0
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
++|+++|+++|++.+.+ ++..++|+|||+ ||++|+.+.|+++++++.+. +++.|+.+|++++++++++
T Consensus 22 ~~v~~l~~~~f~~~~~~--~~k~vlv~F~a~----wC~~C~~~~p~l~~l~~~~~------~~v~~~~vd~~~~~~l~~~ 89 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLK--ADGAILVDFWAE----WCGPAKMIAPILDEIADEYQ------GKLTVAKLNIDQNPGTAPK 89 (128)
T ss_dssp CCSEEECTTTHHHHTTT--CSSEEEEEEECS----SCHHHHHTHHHHHHHHHHTT------TTEEEEEEETTTCCTTSGG
T ss_pred cccEecChhhHHHHHHh--cCCEEEEEEECC----CCHHHHHHhHHHHHHHHHhc------CCeEEEEEECCCCHHHHHH
Confidence 46999999999987643 356799999999 99999999999999999885 4699999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
|+++++|++++|+.| + ......|..+.+++.+||++.++
T Consensus 90 ~~v~~~Pt~~~~~~G-~-----~~~~~~G~~~~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 90 YGIRGIPTLLLFKNG-E-----VAATKVGALSKGQLKEFLDANLA 128 (128)
T ss_dssp GTCCSSSEEEEEETT-E-----EEEEEESCCCHHHHHHHHHHHHC
T ss_pred cCCCccCEEEEEeCC-E-----EEEEEcCCCCHHHHHHHHHHhhC
Confidence 999999999999654 2 23334567789999999988753
No 17
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.71 E-value=1.3e-16 Score=124.79 Aligned_cols=105 Identities=17% Similarity=0.240 Sum_probs=89.7
Q ss_pred CeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHc
Q psy8428 47 AVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (328)
Q Consensus 47 ~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l 126 (328)
+|+++|+++|++.+.++ +..++|.||++ ||++|+.+.|.++++++.+. +++.|+.+|+++++++++++
T Consensus 2 ~v~~l~~~~~~~~~~~~--~~~~lv~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~~~v~~~~~~~~~~~~ 69 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLES--SVPVLVDFWAP----WCGPCRIIAPVVDEIAGEYK------DKLKCVKLNTDESPNVASEY 69 (107)
T ss_dssp CCEEECHHHHHHHTTTC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTCEEEEEETTTCHHHHHHH
T ss_pred ccEeccHHHHHHHHhcC--CCcEEEEEECC----CCHhHHHHHHHHHHHHHHhC------CceEEEEEECCCCHHHHHHC
Confidence 57899999999987533 55799999999 99999999999999999885 46999999999999999999
Q ss_pred CCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 127 ~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
+++++|++++|+.| + ......|..+.+++.+++++.+
T Consensus 70 ~v~~~Pt~~~~~~G-~-----~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 70 GIRSIPTIMVFKGG-K-----KCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp TCCSSCEEEEESSS-S-----EEEEEESCCCHHHHHHHHHHHC
T ss_pred CCCcCCEEEEEeCC-E-----EEEEEeCCCCHHHHHHHHHHHh
Confidence 99999999999755 2 2333457778999999998865
No 18
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.70 E-value=1.2e-16 Score=129.83 Aligned_cols=109 Identities=17% Similarity=0.177 Sum_probs=92.2
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (328)
.++|++||+++|++.+.+. +..++|+|||+ ||++|+.+.|+++++++.+. +++.|+.+|+++++++++
T Consensus 16 ~~~v~~l~~~~f~~~~~~~--~~~~lv~f~a~----wC~~C~~~~~~~~~~~~~~~------~~~~~~~vd~~~~~~l~~ 83 (130)
T 2dml_A 16 SDDVIELTPSNFNREVIQS--DGLWLVEFYAP----WCGHCQRLTPEWKKAATALK------DVVKVGAVNADKHQSLGG 83 (130)
T ss_dssp TSSSEECCTTTHHHHTTTC--SSCEEEEEECT----TCSTTGGGHHHHHHHHHHTT------TTSEEEEEETTTCHHHHH
T ss_pred CCCcEECCHHHHHHHHhcC--CCeEEEEEECC----CCHHHHhhCHHHHHHHHHhc------CceEEEEEeCCCCHHHHH
Confidence 4579999999999976533 45799999999 99999999999999999875 459999999999999999
Q ss_pred HcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 125 ~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
+|+++++||+++|.+++.. .....|..+.+++.+|+.+.+.
T Consensus 84 ~~~v~~~Pt~~~~~~~~~~-----~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 84 QYGVQGFPTIKIFGANKNK-----PEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp HHTCCSSSEEEEESSCTTS-----CEECCSCCSHHHHHHHHHHHHH
T ss_pred HcCCCccCEEEEEeCCCCe-----EEEeecCCCHHHHHHHHHHHHh
Confidence 9999999999999987431 1222467889999999988753
No 19
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.70 E-value=1.3e-16 Score=135.08 Aligned_cols=107 Identities=16% Similarity=0.209 Sum_probs=91.9
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
..++++++++|++.+ +. +..++|+|||+ ||++|+.+.|+++++++.+. +++.|+++|++++++++++
T Consensus 47 ~~~~~l~~~~f~~~~-~~--~~~vlv~F~a~----wC~~C~~~~p~l~~la~~~~------~~v~~~~vd~~~~~~l~~~ 113 (155)
T 2ppt_A 47 GKVAGIDPAILARAE-RD--DLPLLVDFWAP----WCGPCRQMAPQFQAAAATLA------GQVRLAKIDTQAHPAVAGR 113 (155)
T ss_dssp SSEEECCHHHHHHHT-TC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHHT------TTCEEEEEETTTSTHHHHH
T ss_pred CCCccCCHHHHHHHH-hC--CCcEEEEEECC----CCHHHHHHHHHHHHHHHHcc------CCEEEEEEeCCccHHHHHH
Confidence 458999999999987 33 45799999999 99999999999999999985 4699999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCC
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~ 171 (328)
|+|+++|++++|+.| .......|..+.+++.+||++.++.
T Consensus 114 ~~i~~~Pt~~~~~~G------~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 114 HRIQGIPAFILFHKG------RELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp TTCCSSSEEEEEETT------EEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred cCCCcCCEEEEEeCC------eEEEEecCCCCHHHHHHHHHHHhcc
Confidence 999999999999765 2334445778899999999998763
No 20
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=1.1e-16 Score=130.05 Aligned_cols=114 Identities=15% Similarity=0.144 Sum_probs=94.6
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (328)
.++++++|+++|++.+.+. +..++|+|||+ ||++|+.+.|+++++++.+... ..+++.|+.+|+++++++++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~--~~~~lv~f~a~----wC~~C~~~~~~~~~~~~~~~~~--~~~~~~~~~vd~~~~~~l~~ 77 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDS--EDVWMVEFYAP----WCGHCKNLEPEWAAAASEVKEQ--TKGKVKLAAVDATVNQVLAS 77 (133)
T ss_dssp CCSCEECCTTHHHHHTTTS--SSEEEEEEECT----TCHHHHTHHHHHHHHHHHHHHH--TTTSEEEEEEETTTCCHHHH
T ss_pred CCcCEEcCHhhHHHHHhcC--CCeEEEEEECC----CCHHHHhhcHHHHHHHHHHHhh--cCCcEEEEEEECCCCHHHHH
Confidence 4569999999999987433 45799999999 9999999999999999988521 11369999999999999999
Q ss_pred HcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc
Q psy8428 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 125 ~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~ 172 (328)
+|+++++|++++|++| + ......|..+.+++.+|+++.++.+
T Consensus 78 ~~~v~~~Pt~~~~~~g-~-----~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (133)
T 1x5d_A 78 RYGIRGFPTIKIFQKG-E-----SPVDYDGGRTRSDIVSRALDLFSDN 119 (133)
T ss_dssp HHTCCSSSEEEEEETT-E-----EEEEECSCCSHHHHHHHHHHHHHHH
T ss_pred hCCCCeeCeEEEEeCC-C-----ceEEecCCCCHHHHHHHHHHHhhcc
Confidence 9999999999999985 2 2333356778999999999887644
No 21
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.69 E-value=1.9e-16 Score=125.04 Aligned_cols=107 Identities=13% Similarity=0.211 Sum_probs=90.4
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
+.|+++|+++|++.+.++ +..++|+|||+ ||++|+.+.|.++++++.+. +++.|+.+|++++++++++
T Consensus 5 ~~v~~l~~~~~~~~~~~~--~~~~vv~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~~~v~~~~~~~~~~~ 72 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKN--DKPVLVDFWAA----WCGPCRQIAPSLEAIAAEYG------DKIEIVKLNIDENPGTAAK 72 (112)
T ss_dssp CCCEEECTTTHHHHTTTC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTCEEEEEETTTCHHHHHH
T ss_pred ceEEecchhhHHHHHhhC--CCeEEEEEECC----CCHhHHhcCHHHHHHHHHhc------CCeEEEEEEcCCCHHHHHh
Confidence 458999999999877533 55799999999 99999999999999999885 4699999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
|+++++|++++|+.| .......|..+.+++.+|+++.+.
T Consensus 73 ~~v~~~Pt~~~~~~G------~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 73 YGVMSIPTLNVYQGG------EVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp TTCCSSSEEEEEETT------EEEEEEESCCCHHHHHHHTHHHHC
T ss_pred CCCCcccEEEEEeCC------EEEEEEeCCCCHHHHHHHHHHHhh
Confidence 999999999999765 223333577789999999987653
No 22
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=1.5e-16 Score=128.74 Aligned_cols=109 Identities=17% Similarity=0.229 Sum_probs=92.4
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (328)
.++|++||+++|++.+ ++ .++|+|||+ ||++|+.+.|+++++++.+.. .++.|+.+|+++++++++
T Consensus 6 ~~~v~~l~~~~f~~~~-~~----~vlv~f~a~----wC~~C~~~~p~~~~~~~~~~~-----~~v~~~~vd~~~~~~~~~ 71 (126)
T 1x5e_A 6 SGNVRVITDENWRELL-EG----DWMIEFYAP----WCPACQNLQPEWESFAEWGED-----LEVNIAKVDVTEQPGLSG 71 (126)
T ss_dssp CCSEEECCTTTHHHHT-SS----EEEEEEECS----SCHHHHHHHHHHHHHHHHHGG-----GTCEEEEEETTTCHHHHH
T ss_pred CCccEEecHHHHHHHh-CC----CEEEEEECC----CCHHHHHHhHHHHHHHHHhcc-----CCeEEEEEECcCCHHHHH
Confidence 4679999999999875 33 289999999 999999999999999998752 369999999999999999
Q ss_pred HcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCcce
Q psy8428 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQIR 174 (328)
Q Consensus 125 ~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~i~ 174 (328)
+|+++++||+++|+.| + .....|..+.+++.+||++.++..++
T Consensus 72 ~~~v~~~Pt~~~~~~G-~------~~~~~G~~~~~~l~~~l~~~~~~~~~ 114 (126)
T 1x5e_A 72 RFIINALPTIYHCKDG-E------FRRYQGPRTKKDFINFISDKEWKSIE 114 (126)
T ss_dssp HTTCCSSSEEEEEETT-E------EEECCSCCCHHHHHHHHHTCGGGGSC
T ss_pred HcCCcccCEEEEEeCC-e------EEEeecCCCHHHHHHHHHHHhhccCC
Confidence 9999999999999655 2 22234678899999999999876653
No 23
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.69 E-value=2e-16 Score=123.32 Aligned_cols=103 Identities=16% Similarity=0.231 Sum_probs=87.1
Q ss_pred eEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcC
Q psy8428 48 VLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR 127 (328)
Q Consensus 48 VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~ 127 (328)
|+++|+++|++.+ ++ +..++++||++ ||++|+.+.|+++++++.+. +++.|+.+|++++++++++++
T Consensus 2 v~~l~~~~~~~~~-~~--~~~~~v~f~~~----~C~~C~~~~~~l~~~~~~~~------~~v~~~~v~~~~~~~~~~~~~ 68 (105)
T 1nsw_A 2 TMTLTDANFQQAI-QG--DGPVLVDFWAA----WCGPCRMMAPVLEEFAEAHA------DKVTVAKLNVDENPETTSQFG 68 (105)
T ss_dssp CEEECTTTHHHHH-SS--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHST------TTCEEEEEETTTCHHHHHHTT
T ss_pred ceeccHHhHHHHH-hC--CCcEEEEEECC----CCHHHHHHHHHHHHHHHHhc------CCcEEEEEECcCCHHHHHHcC
Confidence 7899999999765 33 34689999999 99999999999999999885 459999999999999999999
Q ss_pred CCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 128 LNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 128 v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
++++|++++|+.| + ......|..+.+++.+++++.+
T Consensus 69 v~~~Pt~~~~~~G-~-----~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 69 IMSIPTLILFKGG-R-----PVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp CCSSSEEEEEETT-E-----EEEEEESCCCHHHHHHHTTTTT
T ss_pred CccccEEEEEeCC-e-----EEEEEecCCCHHHHHHHHHHHh
Confidence 9999999999654 2 2333356778899999998764
No 24
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.69 E-value=1.4e-16 Score=127.98 Aligned_cols=110 Identities=18% Similarity=0.214 Sum_probs=90.6
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
++|+++|+++|++.+.++ +..++|+|||+ ||++|+.+.|+++++++.+. +++.|+.+|++++++++++
T Consensus 3 ~~v~~l~~~~f~~~~~~~--~~~~lv~f~a~----~C~~C~~~~~~~~~~~~~~~------~~~~~~~vd~~~~~~~~~~ 70 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQG--KTHWVVDFYAP----WCGPCQNFAPEFELLARMIK------GKVRAGKVDCQAYPQTCQK 70 (122)
T ss_dssp CCSEECCHHHHHHHTTTC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHHT------TTCEEEEEETTTCHHHHHH
T ss_pred cchhcCCHHHHHHHHhcC--CCeEEEEEECC----CCHHHHHHHHHHHHHHHHhc------CCeEEEEEeCcCCHHHHHH
Confidence 568999999998766433 45799999999 99999999999999999885 3699999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCcee-eeecccCHHHHHHHHHhhcC
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLD-IQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~-~~~~~~~a~~l~~fl~~~t~ 170 (328)
|+++++|++++|++++.. ..+. ...++.+.+++.+|+++.++
T Consensus 71 ~~v~~~Pt~~~~~~~~~~---~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 71 AGIKAYPSVKLYQYERAK---KSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp TTCCSSSEEEEEEEEGGG---TEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred cCCCccceEEEEeCCCcc---ceeeccccCcCCHHHHHHHHHHHHH
Confidence 999999999999877431 1111 01133789999999998765
No 25
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.69 E-value=2.8e-16 Score=122.62 Aligned_cols=106 Identities=16% Similarity=0.210 Sum_probs=89.2
Q ss_pred CeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHc
Q psy8428 47 AVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (328)
Q Consensus 47 ~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l 126 (328)
.|+++|+++|++.+. . +..++|+|+++ ||++|+.+.|.++++++.+. +++.|+.+|++++++++++|
T Consensus 2 ~v~~l~~~~~~~~~~-~--~~~~lv~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~~~v~~~~~~~~~~~~ 68 (109)
T 2yzu_A 2 KPIEVTDQNFDETLG-Q--HPLVLVDFWAE----WCAPCRMIAPILEEIAKEYE------GKLLVAKLDVDENPKTAMRY 68 (109)
T ss_dssp CCEECCTTTHHHHHH-H--CSEEEEEEECT----TCHHHHHHHHHHHHHHHHTB------TTBEEEEEETTTCHHHHHHT
T ss_pred cceEccHhHHHHHhc-C--CCeEEEEEECC----CCHHHHHhhHHHHHHHHHhh------CceEEEEEECCCCHhHHHhC
Confidence 588999999997764 3 34689999999 99999999999999999885 36999999999999999999
Q ss_pred CCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCC
Q psy8428 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (328)
Q Consensus 127 ~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~ 171 (328)
+++++|++++|+.| .......|..+.+++.+|+++.++.
T Consensus 69 ~v~~~Pt~~~~~~g------~~~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 69 RVMSIPTVILFKDG------QPVEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp TCCSSSEEEEEETT------EEEEEEESCCCHHHHHHHHHTTC--
T ss_pred CCCcCCEEEEEeCC------cEeeeEeCCCCHHHHHHHHHHHhhh
Confidence 99999999999654 2233335677899999999988764
No 26
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.69 E-value=1.5e-16 Score=127.19 Aligned_cols=109 Identities=15% Similarity=0.214 Sum_probs=91.1
Q ss_pred hCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhH
Q psy8428 44 AKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (328)
Q Consensus 44 ~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (328)
..++++++++++|++.+.+. +..++|+|+++ ||++|+.+.|+++++++.+. +++.|+.+|++++++++
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~--~~~~lv~f~~~----~C~~C~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~ 77 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSS--NKPVLVDFWAT----WCGPCKMVAPVLEEIATERA------TDLTVAKLDVDTNPETA 77 (121)
T ss_dssp --CCSEECCTTTHHHHTTTC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTCEEEEEETTTCHHHH
T ss_pred hcccceecCHHHHHHHHHhC--CCcEEEEEECC----CCHHHHHHHHHHHHHHHHhc------CCeEEEEEECCCCHHHH
Confidence 45679999999999876533 45799999999 99999999999999999875 46999999999999999
Q ss_pred HHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 124 ~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
++++++++|++++|+.| .......|..+.+++.+||++.+.
T Consensus 78 ~~~~i~~~Pt~~~~~~g------~~~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 78 RNFQVVSIPTLILFKDG------QPVKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp HHTTCCSSSEEEEEETT------EEEEEEESCCCHHHHHHHTCSCCC
T ss_pred HhcCCCcCCEEEEEECC------EEEEEecCCCCHHHHHHHHHHHHh
Confidence 99999999999999865 223334577789999999987653
No 27
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.69 E-value=3.4e-16 Score=128.92 Aligned_cols=112 Identities=17% Similarity=0.225 Sum_probs=94.2
Q ss_pred CCeEEeChhhHHHHHHcCC---------CCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC
Q psy8428 46 KAVLRFDGQKYKEYIKNGP---------RNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF 116 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~---------r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~ 116 (328)
..|++||+++|++.+.+.+ ++..++|+|||+ ||++|+.+.|+++++++.+. +++.|+.+|+
T Consensus 9 ~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~----wC~~C~~~~~~l~~l~~~~~------~~v~~~~vd~ 78 (136)
T 2l5l_A 9 GKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYAD----WCGPCKMVAPILDELAKEYD------GQIVIYKVDT 78 (136)
T ss_dssp TSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECT----TSHHHHHHHHHHHHHHHHTT------TTCEEEEEET
T ss_pred CceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECC----cCHHHHHHHHHHHHHHHHhc------CCEEEEEEeC
Confidence 4699999999999875311 346799999999 99999999999999999885 4699999999
Q ss_pred cCChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCcc
Q psy8428 117 DEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (328)
Q Consensus 117 ~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~i 173 (328)
+++++++++|+++++|++++|.++|+. .. ..|..+.+++.+||++.++..-
T Consensus 79 ~~~~~l~~~~~v~~~Pt~~~~~~~G~~-----~~-~~G~~~~~~l~~~l~~~~~~~~ 129 (136)
T 2l5l_A 79 EKEQELAGAFGIRSIPSILFIPMEGKP-----EM-AQGAMPKASFKKAIDEFLLKKE 129 (136)
T ss_dssp TTCHHHHHHTTCCSSCEEEEECSSSCC-----EE-EESCCCHHHHHHHHHHHHTSCT
T ss_pred CCCHHHHHHcCCCCCCEEEEECCCCcE-----EE-EeCCCCHHHHHHHHHHHhhccC
Confidence 999999999999999999999554432 22 3577899999999999887553
No 28
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.69 E-value=2.1e-16 Score=127.13 Aligned_cols=108 Identities=14% Similarity=0.210 Sum_probs=91.2
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (328)
.+.++.+++++|++.+.+. +..++|+||++ ||++|+.+.|.++++++.+. +++.|+.+|+++++++++
T Consensus 12 ~~~~~~~~~~~f~~~v~~~--~k~vlv~f~a~----~C~~C~~~~~~l~~~~~~~~------~~v~~~~vd~d~~~~l~~ 79 (119)
T 1w4v_A 12 STTFNIQDGPDFQDRVVNS--ETPVVVDFHAQ----WCGPCKILGPRLEKMVAKQH------GKVVMAKVDIDDHTDLAI 79 (119)
T ss_dssp CSEEECCSHHHHHHHTTTC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TSSEEEEEETTTTHHHHH
T ss_pred ceEEEecChhhHHHHHHcC--CCcEEEEEECC----CCHHHHHHHHHHHHHHHHhc------CCeEEEEEeCCCCHHHHH
Confidence 3459999999999987533 45799999999 99999999999999999875 469999999999999999
Q ss_pred HcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 125 ~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
+|+++++|++++|+.| + ......|..+.+++.+||++.+|
T Consensus 80 ~~~v~~~Pt~~~~~~G-~-----~~~~~~G~~~~~~l~~~l~~~l~ 119 (119)
T 1w4v_A 80 EYEVSAVPTVLAMKNG-D-----VVDKFVGIKDEDQLEAFLKKLIG 119 (119)
T ss_dssp HTTCCSSSEEEEEETT-E-----EEEEEESCCCHHHHHHHHHHHHC
T ss_pred HcCCCcccEEEEEeCC-c-----EEEEEcCCCCHHHHHHHHHHHhC
Confidence 9999999999999654 2 23333466789999999998764
No 29
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.69 E-value=3.2e-16 Score=121.84 Aligned_cols=103 Identities=15% Similarity=0.238 Sum_probs=88.2
Q ss_pred eEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcC
Q psy8428 48 VLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR 127 (328)
Q Consensus 48 VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~ 127 (328)
|.++|+++|++.+.++ +..++++||++ ||++|+.+.|.++++++.+. +++.|+.+|.+++++++++++
T Consensus 2 v~~~~~~~~~~~~~~~--~~~~~v~f~~~----~C~~C~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~~~ 69 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLES--EVPVMVDFWAP----WCGPCKLIAPVIDELAKEYS------GKIAVYKLNTDEAPGIATQYN 69 (105)
T ss_dssp CEECCTTTHHHHTTTC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTCEEEEEETTTCHHHHHHTT
T ss_pred ceechhhhHHHHHhcC--CCcEEEEEECC----CChHHHHHHHHHHHHHHHhc------CceEEEEEcCcchHHHHHhCC
Confidence 6789999999987533 55799999999 99999999999999999875 459999999999999999999
Q ss_pred CCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhh
Q psy8428 128 LNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (328)
Q Consensus 128 v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~ 168 (328)
++++|++++|+.| .......|..+.+++.+++++.
T Consensus 70 v~~~Pt~~~~~~g------~~~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 70 IRSIPTVLFFKNG------ERKESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp CCSSSEEEEEETT------EEEEEEEECCCHHHHHHHHHHH
T ss_pred CCcccEEEEEeCC------eEEEEEecCCCHHHHHHHHHhh
Confidence 9999999999765 2233345778899999999875
No 30
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.68 E-value=1.4e-16 Score=126.43 Aligned_cols=115 Identities=23% Similarity=0.328 Sum_probs=94.1
Q ss_pred hCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhH
Q psy8428 44 AKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (328)
Q Consensus 44 ~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (328)
.+++|+++|+++|++.+. . +..++|+|||+ ||++|+.+.|+++++++.+... ..++.|+++|++++++++
T Consensus 5 ~~~~v~~l~~~~~~~~~~-~--~~~~lv~f~~~----~C~~C~~~~~~~~~~~~~~~~~---~~~v~~~~vd~~~~~~~~ 74 (120)
T 1mek_A 5 EEDHVLVLRKSNFAEALA-A--HKYLLVEFYAP----WCGHCKALAPEYAKAAGKLKAE---GSEIRLAKVDATEESDLA 74 (120)
T ss_dssp EETTEEECCTTTHHHHHH-H--CSEEEEEEECS----SCSTTSTTHHHHHHHHHTTTTT---CCCCBCEEEETTTCCSSH
T ss_pred CCCCcEEechhhHHHHHc-c--CCeEEEEEECC----CCHHHHHhhHHHHHHHHHHhcc---CCcEEEEEEcCCCCHHHH
Confidence 356799999999999875 3 34689999999 9999999999999999987531 246999999999999999
Q ss_pred HHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc
Q psy8428 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 124 ~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~ 172 (328)
++++++++|++++|++|. ... .....|..+.+++.+|+++.++..
T Consensus 75 ~~~~v~~~Pt~~~~~~g~-~~~---~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 75 QQYGVRGYPTIKFFRNGD-TAS---PKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp HHHTCCSSSEEEEEESSC-SSS---CEECCCCSSHHHHHHHHHTTSCCC
T ss_pred HHCCCCcccEEEEEeCCC-cCC---cccccCccCHHHHHHHHHhccCCC
Confidence 999999999999997652 110 122246788999999999987743
No 31
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.68 E-value=4.1e-16 Score=123.27 Aligned_cols=106 Identities=11% Similarity=0.206 Sum_probs=88.1
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc-CChhhH
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-EGSDVF 123 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~-~~~~lf 123 (328)
.+.|+++++++|++.+. ..++..++|.|||+ ||++|+.+.|.++++++.+. ++.|+.+|++ +++++.
T Consensus 4 ~~~v~~l~~~~~~~~~~-~~~~~~vlv~f~a~----wC~~C~~~~~~l~~~~~~~~-------~v~~~~vd~~~~~~~~~ 71 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVK-AAGDKPVVLDMFTQ----WCGPSKAMAPKYEKLAEEYL-------DVIFLKLDCNQENKTLA 71 (111)
T ss_dssp TTSEEEECTTTHHHHHT-TCTTSCEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TSEEEEEECSSTTHHHH
T ss_pred cCccEEechHHHHHHHH-hcCCCEEEEEEECC----cCHhHHHHCHHHHHHHHHCC-------CeEEEEEecCcchHHHH
Confidence 45699999999999884 33456799999999 99999999999999999873 4999999999 689999
Q ss_pred HHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 124 ~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
++|+++++||+++++.| + ......| .+.+++.++|++.+
T Consensus 72 ~~~~v~~~Pt~~~~~~G-~-----~~~~~~G-~~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 72 KELGIRVVPTFKILKEN-S-----VVGEVTG-AKYDKLLEAIQAAR 110 (111)
T ss_dssp HHHCCSBSSEEEEESSS-S-----EEEEEES-SCHHHHHHHHHHHH
T ss_pred HHcCCCeeeEEEEEeCC-c-----EEEEEcC-CCHHHHHHHHHHhh
Confidence 99999999999988765 2 2233234 46899999998764
No 32
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.68 E-value=4.5e-16 Score=122.21 Aligned_cols=105 Identities=18% Similarity=0.336 Sum_probs=86.0
Q ss_pred CeEEe-ChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 47 AVLRF-DGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 47 ~VI~L-~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
+++++ ++++|++.+.+ .++..++|+|||+ ||++|+.+.|.++++++.+. ++.|+++|+++++++.++
T Consensus 2 ~v~~i~~~~~~~~~~~~-~~~~~v~v~f~a~----wC~~C~~~~~~~~~~~~~~~-------~~~~~~vd~~~~~~~~~~ 69 (107)
T 1gh2_A 2 GVKPVGSDPDFQPELSG-AGSRLAVVKFTMR----GCGPCLRIAPAFSSMSNKYP-------QAVFLEVDVHQCQGTAAT 69 (107)
T ss_dssp CEEEECSGGGHHHHHHH-TTTSCEEEEEECS----SCHHHHHHHHHHHHHHHHCT-------TSEEEEEETTTSHHHHHH
T ss_pred ceEEecCHHHHHHHHHh-CCCCEEEEEEECC----CChhhHHHHHHHHHHHHHCC-------CcEEEEEECccCHHHHHh
Confidence 46777 45899998853 2355799999999 99999999999999999872 599999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
|+++++||+++|+.| ...+... |.+.+++.+|+++.+|
T Consensus 70 ~~v~~~Pt~~~~~~G------~~~~~~~-G~~~~~l~~~l~~~lg 107 (107)
T 1gh2_A 70 NNISATPTFQFFRNK------VRIDQYQ-GADAVGLEEKIKQHLE 107 (107)
T ss_dssp TTCCSSSEEEEEETT------EEEEEEE-SSCHHHHHHHHHHHHC
T ss_pred cCCCcccEEEEEECC------eEEEEEe-CCCHHHHHHHHHHhcC
Confidence 999999999999765 2233323 4566779999998765
No 33
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.68 E-value=2e-16 Score=131.05 Aligned_cols=109 Identities=12% Similarity=0.213 Sum_probs=93.1
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (328)
.+.++++++++|++.+.+. +..++|+|||+ ||++|+.+.|+++++++.+. +++.|+.+|+++++++++
T Consensus 5 ~~~v~~l~~~~f~~~~~~~--~~~vlv~F~a~----wC~~C~~~~~~l~~l~~~~~------~~v~~~~vd~~~~~~l~~ 72 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDS--KKPVVVMFYSP----ACPYCKAMEPYFEEYAKEYG------SSAVFGRINIATNPWTAE 72 (140)
T ss_dssp TTTEEEECHHHHHHHTTTC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHHT------TTSEEEEEETTTCHHHHH
T ss_pred CcceEEcchHhHHHHHHhC--CCcEEEEEECC----CChhHHHHHHHHHHHHHHhC------CceEEEEEECCcCHhHHH
Confidence 4569999999999766543 55799999999 99999999999999999985 469999999999999999
Q ss_pred HcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCC
Q psy8428 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (328)
Q Consensus 125 ~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~ 171 (328)
+|+++++|++++|+.| .......|..+.+++.+||++.++.
T Consensus 73 ~~~v~~~Pt~~~~~~G------~~~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 73 KYGVQGTPTFKFFCHG------RPVWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp HHTCCEESEEEEEETT------EEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred HCCCCcCCEEEEEeCC------cEEEEEcCCCCHHHHHHHHHHHhcc
Confidence 9999999999999765 2334445778899999999987753
No 34
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.68 E-value=3e-16 Score=124.08 Aligned_cols=107 Identities=14% Similarity=0.306 Sum_probs=85.4
Q ss_pred CeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 47 AVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 47 ~VI~L~~-~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
+|+++++ ++|++.+.+..++..++|.|||+ ||++|+.+.|.++++++.+.. +++.|+++|+++++++.++
T Consensus 1 ~v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~----wC~~C~~~~~~~~~~~~~~~~-----~~~~~~~vd~~~~~~~~~~ 71 (112)
T 3d6i_A 1 PVIEINDQEQFTYLTTTAAGDKLIVLYFHTS----WAEPCKALKQVFEAISNEPSN-----SNVSFLSIDADENSEISEL 71 (112)
T ss_dssp CEEEECCHHHHHHHHTTTTTTCCEEEEEECC----C--CHHHHHHHHHHHHHCGGG-----TTSEEEEEETTTCHHHHHH
T ss_pred CccccCCHHHHHHHHhcccCCCEEEEEEECC----CCHHHHHHHHHHHHHHHhcCC-----CCEEEEEEecccCHHHHHH
Confidence 4789998 99999885314466799999999 999999999999999998642 3599999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
++++++|++++|+.| + ..... .|...+++.+++++.+
T Consensus 72 ~~v~~~Pt~~~~~~G-~-----~~~~~-~G~~~~~l~~~l~~~~ 108 (112)
T 3d6i_A 72 FEISAVPYFIIIHKG-T-----ILKEL-SGADPKEYVSLLEDCK 108 (112)
T ss_dssp TTCCSSSEEEEEETT-E-----EEEEE-CSCCHHHHHHHHHHHH
T ss_pred cCCCcccEEEEEECC-E-----EEEEe-cCCCHHHHHHHHHHHH
Confidence 999999999999765 2 23322 2446667999998764
No 35
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.67 E-value=1.5e-16 Score=129.47 Aligned_cols=107 Identities=11% Similarity=0.216 Sum_probs=86.1
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCc--------------cchhhHHHHHHHHHHcccccCCCCcEEE
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCH--------------ICVSASDEYTIVANSFRYSQMYSNKLFF 111 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~--------------~C~~~~pef~~vA~s~~~~~~~~~~v~F 111 (328)
++|+++++++|++.+.+ ++..++|+|||+ ||+ +|+.+.|.++++++.+. +++.|
T Consensus 3 ~~v~~l~~~~f~~~~~~--~~k~vlv~F~a~----wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~------~~~~~ 70 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLK--ADGAILVDFWAE----WCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQ------GKLTV 70 (123)
T ss_dssp CSCEECCSTTHHHHTTS--CSSEEEEEEECS----SCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------------CEE
T ss_pred CccEecChhhHHHHHHh--CCCeEEEEEECC----CCccccccccccccCCCCcHHHHHHHHHHHHHhc------CCeEE
Confidence 56999999999987643 356799999999 999 99999999999998875 46999
Q ss_pred EEEECcCChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 112 ILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 112 ~~vD~~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
+++|++++++++++|+++++|++++|+.| + ......|..+.+++.+||++.++
T Consensus 71 ~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G-~-----~~~~~~G~~~~~~l~~~l~~~l~ 123 (123)
T 1oaz_A 71 AKLNIDQNPGTAPKYGIRGIPTLLLFKNG-E-----VAATKVGALSKGQLKEFLDANLA 123 (123)
T ss_dssp EEEETTSCTTTGGGGTCCBSSEEEEEESS-S-----EEEEEESCCCHHHHHHHHTTTCC
T ss_pred EEEECCCCHHHHHHcCCCccCEEEEEECC-E-----EEEEEeCCCCHHHHHHHHHHHhC
Confidence 99999999999999999999999999654 2 23334577889999999988764
No 36
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.67 E-value=2.8e-16 Score=127.81 Aligned_cols=103 Identities=13% Similarity=0.172 Sum_probs=84.5
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
..|+++|+++|++.+.+.+.+-.++|.|||+ ||++|+.+.|.++++|+.|. ++.|+++|++++ .++
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~----wc~~C~~~~p~l~~la~~~~-------~v~f~kvd~d~~---~~~ 68 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRS----SIPMCLLVNQHLSLLARKFP-------ETKFVKAIVNSC---IQH 68 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECT----TSHHHHHHHHHHHHHHHHCT-------TSEEEEEEGGGT---STT
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCC----CChHHHHHHHHHHHHHHHCC-------CCEEEEEEhHHh---HHH
Confidence 3589999999999886544455799999999 99999999999999999873 599999999987 489
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeec-------ccCHHHHHHHHHhh
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRV-------GYSAEAIVKWIADR 168 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~-------~~~a~~l~~fl~~~ 168 (328)
|+|+++||+++|+.|. ..+...| ..+.+++..+|.+.
T Consensus 69 ~~v~~~PT~~~fk~G~------~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 69 YHDNCLPTIFVYKNGQ------IEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp CCGGGCSEEEEEETTE------EEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEECCE------EEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 9999999999999872 1222222 35789999999764
No 37
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.67 E-value=4.3e-16 Score=143.65 Aligned_cols=108 Identities=11% Similarity=0.189 Sum_probs=93.7
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (328)
.+.|+++|++||++.+ ..+++..++|.|||+ ||++|+.+.|.++++++.+. +++.|+++|+++++++++
T Consensus 6 ~~~v~~~~~~~f~~~~-~~~~~~~v~v~f~a~----wC~~C~~~~p~~~~~~~~~~------~~~~~~~vd~~~~~~~~~ 74 (287)
T 3qou_A 6 VENIVNINESNLQQVL-EQSMTTPVLFYFWSE----RSQHCLQLTPILESLAAQYN------GQFILAKLDCDAEQMIAA 74 (287)
T ss_dssp CTTEEECCTTTHHHHH-TTTTTSCEEEEEECT----TCTTTTTTHHHHHHHHHHHT------SSSEEEEEETTTCHHHHH
T ss_pred CCccEECCHHHHHHHH-HhcCCCeEEEEEECC----CChHHHHHHHHHHHHHHHcC------CCeEEEEEeCccCHHHHH
Confidence 3569999999999976 344567899999999 99999999999999999885 469999999999999999
Q ss_pred HcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 125 ~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
+|+|+++||+++|+.| .......|..+.+++.+|+.+.+
T Consensus 75 ~~~v~~~Pt~~~~~~G------~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 75 QFGLRAIPTVYLFQNG------QPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp TTTCCSSSEEEEEETT------EEEEEEESCCCHHHHHHHHHHHS
T ss_pred HcCCCCCCeEEEEECC------EEEEEeeCCCCHHHHHHHHHHHc
Confidence 9999999999999765 23344457788999999999886
No 38
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.67 E-value=2.8e-16 Score=126.09 Aligned_cols=105 Identities=15% Similarity=0.213 Sum_probs=87.7
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
......++++|++.+.+ .++..++|+|||+ ||++|+.+.|+++++++.+. ++.|+++|+++++++.++
T Consensus 12 ~~~~~~t~~~f~~~l~~-~~~k~vlv~F~a~----wC~~C~~~~p~l~~l~~~~~-------~v~~~~vd~d~~~~l~~~ 79 (116)
T 3qfa_C 12 SVKQIESKTAFQEALDA-AGDKLVVVDFSAT----WCGPSKMIKPFFHSLSEKYS-------NVIFLEVDVDDCQDVASE 79 (116)
T ss_dssp CCBCCCCHHHHHHHHHH-HTTSCEEEEEECT----TCHHHHHHHHHHHHHHTTCT-------TSEEEEEETTTTHHHHHH
T ss_pred cccCCCCHHHHHHHHHh-cCCCEEEEEEECC----CCHHHHHHHHHHHHHHHHCC-------CCEEEEEECCCCHHHHHH
Confidence 34677889999998752 2356799999999 99999999999999998874 399999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
|+++++|++++|++| .......|. +.+++.++|++.+
T Consensus 80 ~~v~~~Pt~~~~~~G------~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 80 CEVKSMPTFQFFKKG------QKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp TTCCSSSEEEEESSS------SEEEEEESC-CHHHHHHHHHHHC
T ss_pred cCCccccEEEEEeCC------eEEEEEcCC-CHHHHHHHHHHhC
Confidence 999999999999765 223333455 9999999998753
No 39
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.67 E-value=3.6e-16 Score=120.75 Aligned_cols=103 Identities=18% Similarity=0.267 Sum_probs=88.3
Q ss_pred eEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcC
Q psy8428 48 VLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR 127 (328)
Q Consensus 48 VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~ 127 (328)
|+++|+++|++.+. . +..++++|+++ ||++|+.+.|.++++++.+. + +.|+.+|++++++++++++
T Consensus 1 V~~l~~~~~~~~~~-~--~~~~~v~f~~~----~C~~C~~~~~~~~~~~~~~~------~-~~~~~v~~~~~~~~~~~~~ 66 (104)
T 2e0q_A 1 VIHLDSKNFDSFLA-S--HEIAVVDFWAE----WCAPCLILAPIIEELAEDYP------Q-VGFGKLNSDENPDIAARYG 66 (104)
T ss_dssp CEECCTTTHHHHHH-H--SSEEEEEEECT----TCHHHHHHHHHHHHHHHHCT------T-SEEEEEETTTCHHHHHHTT
T ss_pred CeecCHHHHHHHHh-c--CCcEEEEEECC----CChhHHHHhHHHHHHHHHcC------C-ceEEEEECCCCHHHHHhCC
Confidence 67899999999984 3 34799999999 99999999999999998874 3 9999999999999999999
Q ss_pred CCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 128 LNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 128 v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
++++|++++|+.| .......|..+.+++.+|+++.++
T Consensus 67 v~~~Pt~~~~~~g------~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 67 VMSLPTVIFFKDG------EPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp CCSSCEEEEEETT------EEEEEEESCCCHHHHHHHHHHHHT
T ss_pred ccccCEEEEEECC------eEhhhccCCCCHHHHHHHHHHHhc
Confidence 9999999999655 223333567789999999998764
No 40
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.67 E-value=9.3e-17 Score=130.93 Aligned_cols=116 Identities=14% Similarity=0.242 Sum_probs=95.3
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (328)
.+.|++|++++|++.+.+ ++..++|+|||+ ||++|+.+.|+++++++.+.. .+++.|+.+|+++++.+.+
T Consensus 6 ~~~v~~l~~~~~~~~~~~--~~~~vlv~f~a~----wC~~C~~~~p~~~~~~~~~~~----~~~~~~~~vd~~~~~~~~~ 75 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMD--PKKDVLIEFYAP----WCGHCKQLEPIYTSLGKKYKG----QKDLVIAKMDATANDITND 75 (133)
T ss_dssp SCSSEECCTTTCCCCCTC--TTSEEEEEECCT----TCSHHHHHHHHHHHHHHHHTT----SSSEEEEEECTTTSCCCCS
T ss_pred CCceEEEcCCCHHHHhcc--CCCcEEEEEECC----CChhHHHHHHHHHHHHHHhcC----CCCEEEEEecCCcCHHHHh
Confidence 456999999999988742 356799999999 999999999999999998852 1369999999999999999
Q ss_pred HcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCcc
Q psy8428 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (328)
Q Consensus 125 ~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~i 173 (328)
+|+++++||+++|++++.. ....+..+..+.++|.+||++.++...
T Consensus 76 ~~~v~~~Pt~~~~~~g~~~---~~~~~~gg~~~~~~l~~~l~~~~~~~~ 121 (133)
T 2dj3_A 76 QYKVEGFPTIYFAPSGDKK---NPIKFEGGNRDLEHLSKFIDEHATKRS 121 (133)
T ss_dssp SCCCSSSSEEEEECTTCTT---SCEECCSSCCSTTHHHHHHHHHSSSCS
T ss_pred hcCCCcCCEEEEEeCCCcc---cceEecCCCcCHHHHHHHHHHhccccc
Confidence 9999999999999887432 122222234789999999999988654
No 41
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.67 E-value=4.2e-16 Score=128.14 Aligned_cols=113 Identities=12% Similarity=0.192 Sum_probs=94.9
Q ss_pred hCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhH
Q psy8428 44 AKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (328)
Q Consensus 44 ~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (328)
..+.|++||+++|++.+. . +..++|+|||+ ||++|+.+.|+++++++.+... ..++.|+++|++++++++
T Consensus 15 ~~~~v~~l~~~~~~~~~~-~--~~~vlv~f~a~----wC~~C~~~~p~~~~~~~~~~~~---~~~v~~~~vd~~~~~~~~ 84 (140)
T 2dj1_A 15 EENGVWVLNDGNFDNFVA-D--KDTVLLEFYAP----WCGHCKQFAPEYEKIASTLKDN---DPPIAVAKIDATSASMLA 84 (140)
T ss_dssp EETTEEECCTTTHHHHHT-T--CSEEEEEECCT----TCHHHHTTHHHHHHHHHHHHSS---SSCCEEEEECTTTCHHHH
T ss_pred CCCCCEEcChHhHHHHHh-c--CCeEEEEEECC----CCHHHHHhhHHHHHHHHHHhcc---CCceEEEEEeCcccHHHH
Confidence 456799999999999874 3 45799999999 9999999999999999988621 124999999999999999
Q ss_pred HHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCcc
Q psy8428 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (328)
Q Consensus 124 ~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~i 173 (328)
++|+++++|++++|+.| + .....|..+.++|.+||++.++...
T Consensus 85 ~~~~v~~~Pt~~~~~~G-~------~~~~~g~~~~~~l~~~l~~~~~~~~ 127 (140)
T 2dj1_A 85 SKFDVSGYPTIKILKKG-Q------AVDYDGSRTQEEIVAKVREVSQPDW 127 (140)
T ss_dssp HHTTCCSSSEEEEEETT-E------EEECCSCCCHHHHHHHHHHHHSSSC
T ss_pred HHCCCCccCeEEEEECC-c------EEEcCCCCCHHHHHHHHHHhcCCCC
Confidence 99999999999999765 1 2222467899999999999988664
No 42
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.67 E-value=4.7e-16 Score=129.65 Aligned_cols=108 Identities=14% Similarity=0.281 Sum_probs=93.0
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (328)
...++++++++|++.+ .. +..++|+|||+ ||++|+.+.|+++++++.+. +++.|+.+|.++++++.+
T Consensus 37 ~~~v~~l~~~~~~~~~-~~--~k~vlv~F~a~----wC~~C~~~~p~l~~~~~~~~------~~~~~~~vd~~~~~~l~~ 103 (148)
T 3p2a_A 37 DGEVINATAETLDKLL-QD--DLPMVIDFWAP----WCGPCRSFAPIFAETAAERA------GKVRFVKVNTEAEPALST 103 (148)
T ss_dssp CCCCEECCTTTHHHHT-TC--SSCEEEEEECS----SCHHHHHHHHHHHHHHHHTT------TTCEEEEEETTTCHHHHH
T ss_pred cCCceecCHHHHHHHH-hc--CCcEEEEEECC----CCHHHHHHHHHHHHHHHHcC------CceEEEEEECcCCHHHHH
Confidence 3569999999999987 23 55799999999 99999999999999999885 469999999999999999
Q ss_pred HcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCC
Q psy8428 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (328)
Q Consensus 125 ~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~ 171 (328)
+|+++++|++++|+.| .......|..+.+++.+||++.++.
T Consensus 104 ~~~v~~~Pt~~~~~~G------~~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 104 RFRIRSIPTIMLYRNG------KMIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp HTTCCSSSEEEEEETT------EEEEEESSCCCHHHHHHHHHHHHHS
T ss_pred HCCCCccCEEEEEECC------eEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 9999999999999765 2334445778999999999988763
No 43
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.65 E-value=1e-15 Score=119.20 Aligned_cols=103 Identities=16% Similarity=0.238 Sum_probs=86.7
Q ss_pred eEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHc
Q psy8428 48 VLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (328)
Q Consensus 48 VI~L~~-~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l 126 (328)
|+++++ ++|++.+.+ .++..+++.|+++ ||++|+.+.|.++++++.+. +++.|+.+|+++++++++++
T Consensus 2 v~~l~~~~~~~~~l~~-~~~~~~vv~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~~~v~~~~~~~~~~~~ 70 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTK-ASGKLVVLDFFAT----WCGPCKMISPKLVELSTQFA------DNVVVLKVDVDECEDIAMEY 70 (106)
T ss_dssp EEECCSHHHHHHHHHH-HTTSEEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTEEEEEEETTTCHHHHHHT
T ss_pred ceecCCHHHHHHHHHh-cCCCEEEEEEECC----cCHHHHHhhHHHHHHHHHhC------CCeEEEEEeccchHHHHHHc
Confidence 678899 899998853 2355799999999 99999999999999999874 46999999999999999999
Q ss_pred CCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhh
Q psy8428 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (328)
Q Consensus 127 ~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~ 168 (328)
+++++|++++|+.| .......| .+.+++.+++++.
T Consensus 71 ~v~~~Pt~~~~~~G------~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 71 NISSMPTFVFLKNG------VKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp TCCSSSEEEEEETT------EEEEEEES-CCHHHHHHHHHHT
T ss_pred CCCcccEEEEEcCC------cEEEEEcC-CCHHHHHHHHHHh
Confidence 99999999999765 22333334 7889999999875
No 44
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.65 E-value=7.8e-16 Score=121.35 Aligned_cols=108 Identities=19% Similarity=0.306 Sum_probs=87.8
Q ss_pred CCeEEe-ChhhHHHHHHcCC-CCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhH
Q psy8428 46 KAVLRF-DGQKYKEYIKNGP-RNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (328)
Q Consensus 46 ~~VI~L-~~~nf~~~v~~~~-r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (328)
+.|+++ ++++|++.+.+.. ++..++|.||++ ||++|+.+.|.++++++.+. +++.|+.+|+++++++.
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~~~vd~~~~~~~~ 71 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTAT----WCGPCKMIAPLFETLSNDYA------GKVIFLKVDVDAVAAVA 71 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTCCEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTSEEEEEETTTTHHHH
T ss_pred CcEEEecCHHHHHHHHHhhcccCCeEEEEEECC----CCHHHHHHHHHHHHHHHHcC------CCeEEEEEECCchHHHH
Confidence 458899 5689999885311 134699999999 99999999999999999874 36999999999999999
Q ss_pred HHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 124 ~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
++|+++++|++++|+.| + ......|. +.+++.+||++.+.
T Consensus 72 ~~~~v~~~Pt~~~~~~G-~-----~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 72 EAAGITAMPTFHVYKDG-V-----KADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp HHHTCCBSSEEEEEETT-E-----EEEEEESC-CHHHHHHHHHHHHC
T ss_pred HHcCCCcccEEEEEECC-e-----EEEEEcCC-CHHHHHHHHHHHhc
Confidence 99999999999999765 2 22333354 89999999988753
No 45
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.65 E-value=3.3e-16 Score=125.37 Aligned_cols=115 Identities=17% Similarity=0.297 Sum_probs=90.6
Q ss_pred hCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhH
Q psy8428 44 AKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (328)
Q Consensus 44 ~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (328)
.+++|++|++++|++.+.+ ++..++|+|||+ ||++|+.+.|+++++++.+... +..+++.|+++|+++++ +.
T Consensus 5 ~~~~v~~l~~~~f~~~v~~--~~~~vlv~f~a~----wC~~C~~~~p~~~~~~~~~~~~-~~~~~v~~~~vd~~~~~-~~ 76 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLD--DTKDVLIEFYAP----WCGHCKALAPKYEELGALYAKS-EFKDRVVIAKVDATAND-VP 76 (121)
T ss_dssp CSCSSEECCTTTTTTSSSC--TTSCEEEEEECS----SCTTHHHHHHHHHHHHHHHTTS-SCTTSSEEEEEETTTSC-CS
T ss_pred CCCCeEEecccCHHHHhhc--CCCCEEEEEECC----CCHhHHHhhHHHHHHHHHHhhc-ccCCceEEEEEECcccc-cc
Confidence 3467999999999988632 356799999999 9999999999999999998521 11236999999999887 44
Q ss_pred HHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc
Q psy8428 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 124 ~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~ 172 (328)
+ +++++||+++|+++++.. .....|..+.+++.+||++.++..
T Consensus 77 ~--~v~~~Pt~~~~~~~~~~~----~~~~~G~~~~~~l~~~i~~~~~~~ 119 (121)
T 2djj_A 77 D--EIQGFPTIKLYPAGAKGQ----PVTYSGSRTVEDLIKFIAENGKYK 119 (121)
T ss_dssp S--CCSSSSEEEEECSSCTTS----CCCCCCCSCHHHHHHHHHHTSSSC
T ss_pred c--ccCcCCeEEEEeCcCCCC----ceEecCCCCHHHHHHHHHhccCcC
Confidence 4 999999999999875410 111246788999999999987644
No 46
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.65 E-value=1.6e-15 Score=122.13 Aligned_cols=106 Identities=12% Similarity=0.241 Sum_probs=87.8
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc-CChhhH
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-EGSDVF 123 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~-~~~~lf 123 (328)
.+.++++++++|++.+.+ .++..++|.|||+ ||++|+.+.|.++++++.+. ++.|+.+|++ +++++.
T Consensus 17 ~~~v~~l~~~~~~~~~~~-~~~~~~vv~f~a~----wC~~C~~~~~~l~~~~~~~~-------~~~~~~vd~~~~~~~~~ 84 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKA-AGDKPVVLDMFTQ----WCGPCKAMAPKYEKLAEEYL-------DVIFLKLDCNQENKTLA 84 (124)
T ss_dssp TTSEEEECTTTHHHHHHH-TTTSCEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TSEEEEEECSSTTHHHH
T ss_pred CCceEEecchhHHHHHHh-cCCCEEEEEEECC----cCHhHHHHhHHHHHHHHHCC-------CCEEEEEecCcchHHHH
Confidence 456999999999998853 2456799999999 99999999999999999873 4899999998 689999
Q ss_pred HHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 124 ~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
++++++++||++++++| .......| ...+++.+++++..
T Consensus 85 ~~~~v~~~Pt~~~~~~G------~~~~~~~G-~~~~~l~~~i~~~~ 123 (124)
T 1faa_A 85 KELGIRVVPTFKILKEN------SVVGEVTG-AKYDKLLEAIQAAR 123 (124)
T ss_dssp HHHCCSSSSEEEEEETT------EEEEEEES-SCHHHHHHHHHHHT
T ss_pred HHcCCCeeeEEEEEeCC------cEEEEEcC-CCHHHHHHHHHHhh
Confidence 99999999999999875 22233234 45899999998764
No 47
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.64 E-value=9.8e-16 Score=126.51 Aligned_cols=106 Identities=14% Similarity=0.174 Sum_probs=76.8
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
+.++++|+++|++.+.++ +. ++|+||++ ||++|+.+.|.++++++.+. +++.|+.+|++++++++++
T Consensus 33 ~~v~~l~~~~~~~~~~~~--~~-vvv~f~~~----~C~~C~~~~~~l~~l~~~~~------~~v~~~~vd~~~~~~l~~~ 99 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGA--PL-TLVDFFAP----WCGPCRLVSPILEELARDHA------GRLKVVKVNVDEHPGLAAR 99 (140)
T ss_dssp ----------------CC--CE-EEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTEEEEEEETTTCHHHHHH
T ss_pred CccccCCHHHHHHHHHcC--CC-EEEEEECC----CCHHHHHHHHHHHHHHHHcc------CceEEEEEECCCCHHHHHH
Confidence 458999999999987533 34 99999999 99999999999999999885 3699999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
|+++++|++++|+.| .......|..+.+++.+||++.++
T Consensus 100 ~~v~~~Pt~~~~~~G------~~~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 100 YGVRSVPTLVLFRRG------APVATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp TTCCSSSEEEEEETT------EEEEEEESCCCHHHHHHHHHHHHT
T ss_pred CCCCccCEEEEEeCC------cEEEEEeCCCCHHHHHHHHHHHHc
Confidence 999999999999765 223334577789999999998764
No 48
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.64 E-value=2e-15 Score=117.46 Aligned_cols=103 Identities=17% Similarity=0.297 Sum_probs=85.0
Q ss_pred eEEe-ChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHc
Q psy8428 48 VLRF-DGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (328)
Q Consensus 48 VI~L-~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l 126 (328)
+.++ ++++|++.+. ..++..+++.||++ ||++|+.+.|.++++++.+. ++.|+.+|.++++++.+++
T Consensus 2 v~~i~~~~~~~~~l~-~~~~~~~~v~f~~~----~C~~C~~~~~~~~~~~~~~~-------~~~~~~vd~~~~~~~~~~~ 69 (105)
T 3m9j_A 2 VKQIESKTAFQEALD-AAGDKLVVVDFSAT----WCGPCKMIKPFFHSLSEKYS-------NVIFLEVDVDDCQDVASES 69 (105)
T ss_dssp CEECCSHHHHHHHHH-HTTTSCEEEEEECT----TCHHHHHHHHHHHHHHHHST-------TSEEEEEETTTCHHHHHHT
T ss_pred eEEcCCHHHHHHHHH-hcCCCeEEEEEECC----CChhhHHHHHHHHHHHHHcc-------CeEEEEEEhhhhHHHHHHc
Confidence 3455 4578988875 33456799999999 99999999999999999874 4999999999999999999
Q ss_pred CCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 127 ~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
+++++|++++|++| .......|. +.+++.+++++.+
T Consensus 70 ~v~~~Pt~~~~~~g------~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 70 EVKSMPTFQFFKKG------QKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp TCCBSSEEEEEETT------EEEEEEESS-CHHHHHHHHHHHC
T ss_pred CCCcCcEEEEEECC------eEEEEEeCC-CHHHHHHHHHHhC
Confidence 99999999999765 223333455 9999999998753
No 49
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.64 E-value=1.1e-15 Score=124.66 Aligned_cols=103 Identities=17% Similarity=0.270 Sum_probs=87.4
Q ss_pred CeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 47 AVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 47 ~VI~L~~-~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
-+++|++ ++|++.+. . +..++|+|||+ ||++|+.+.|+++++++.+. ++.|+++|++++++++++
T Consensus 20 mv~~l~~~~~f~~~~~-~--~k~vvv~F~a~----wC~~C~~~~p~l~~l~~~~~-------~v~~~~vd~d~~~~l~~~ 85 (125)
T 1r26_A 20 SVVDVYSVEQFRNIMS-E--DILTVAWFTAV----WCGPCKTIERPMEKIAYEFP-------TVKFAKVDADNNSEIVSK 85 (125)
T ss_dssp CCEEECCHHHHHHHHH-S--SSCEEEEEECT----TCHHHHHTHHHHHHHHHHCT-------TSEEEEEETTTCHHHHHH
T ss_pred ceEECCCHHHHHHHHc-c--CCEEEEEEECC----cCHhHHHHHHHHHHHHHHCC-------CCEEEEEECCCCHHHHHH
Confidence 3899999 99999873 3 45699999999 99999999999999999872 599999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
|+++++|++++|+.| .......| .+.+++.++|++.++
T Consensus 86 ~~v~~~Pt~~i~~~G------~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 86 CRVLQLPTFIIARSG------KMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp TTCCSSSEEEEEETT------EEEEEEES-SCHHHHHHHHHHHHH
T ss_pred cCCCcccEEEEEeCC------eEEEEEeC-CCHHHHHHHHHHHhc
Confidence 999999999999765 22333334 688999999988754
No 50
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=1e-16 Score=132.11 Aligned_cols=106 Identities=19% Similarity=0.196 Sum_probs=85.6
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
+.|+++|+++|++.+. ..++..++|+|||+ ||++|+.+.|+++++++.+.. .++.|+++|++++++++++
T Consensus 7 ~~v~~l~~~~f~~~~~-~~~~~~vlv~f~a~----wC~~C~~~~p~~~~l~~~~~~-----~~v~~~~vd~~~~~~~~~~ 76 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELE-RDKRVTWIVEFFAN----WSNDCQSFAPIYADLSLKYNC-----TGLNFGKVDVGRYTDVSTR 76 (137)
T ss_dssp SCCEECCTTHHHHHHH-HSTTSCEEEEECCT----TCSTTTTTHHHHHHHHHHHCS-----SSCEEEECCTTTCHHHHHH
T ss_pred ceEEEccHhhHHHHHh-cCCCCEEEEEEECC----CCHHHHHHHHHHHHHHHHhCC-----CCeEEEEEeCccCHHHHHH
Confidence 4599999999999985 44566799999999 999999999999999999851 3699999999999999999
Q ss_pred cCCC------cCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHh
Q psy8428 126 LRLN------TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIAD 167 (328)
Q Consensus 126 l~v~------svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~ 167 (328)
|+++ ++||+++|+.| + ......|..+.+++.+|+.+
T Consensus 77 ~~v~~~~~~~~~Pt~~~~~~G-~-----~~~~~~G~~~~~~l~~~l~~ 118 (137)
T 2dj0_A 77 YKVSTSPLTKQLPTLILFQGG-K-----EAMRRPQIDKKGRAVSWTFS 118 (137)
T ss_dssp TTCCCCSSSSCSSEEEEESSS-S-----EEEEESCBCSSSCBCCCCCC
T ss_pred ccCcccCCcCCCCEEEEEECC-E-----EEEEecCcCchHHHHHHHhc
Confidence 9999 99999999765 2 22333345555555555543
No 51
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.64 E-value=3.5e-16 Score=131.12 Aligned_cols=107 Identities=7% Similarity=0.076 Sum_probs=76.7
Q ss_pred CeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCC--CccchhhHHHHHHHHHHcccccCCCCcEE--EEEEECcCChhh
Q psy8428 47 AVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRN--CHICVSASDEYTIVANSFRYSQMYSNKLF--FILVDFDEGSDV 122 (328)
Q Consensus 47 ~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~--C~~C~~~~pef~~vA~s~~~~~~~~~~v~--F~~vD~~~~~~l 122 (328)
++..+|+++|++.+. .++ .++|+|++. | |++|+.+.|.++++|+.+ . ++. |+++|+++++++
T Consensus 18 ~~~~l~~~~f~~~i~-~~~--~~vv~f~~~----~~~C~~C~~l~P~l~~la~~~-~------~v~~~~~~Vd~d~~~~l 83 (142)
T 2es7_A 18 GWQPVEASTVDDWIK-RVG--DGVILLSSD----PRRTPEVSDNPVMIAELLREF-P------QFDWQVAVADLEQSEAI 83 (142)
T ss_dssp TCEECCCC---------CC--SEEEEECCC----SCC----CCHHHHHHHHHHTC-T------TSCCEEEEECHHHHHHH
T ss_pred cCcccccccHHHHHH-hCC--CEEEEEECC----CCCCccHHHHHHHHHHHHHHh-c------ccceeEEEEECCCCHHH
Confidence 899999999999875 322 378889887 6 999999999999999987 2 477 999999999999
Q ss_pred HHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCcc
Q psy8428 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (328)
Q Consensus 123 f~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~i 173 (328)
+++|+|+++||+++|+.| + ..+...|..+.+++.+|+++.++...
T Consensus 84 a~~~~V~~iPT~~~fk~G-~-----~v~~~~G~~~~~~l~~~i~~~l~~~~ 128 (142)
T 2es7_A 84 GDRFNVRRFPATLVFTDG-K-----LRGALSGIHPWAELLTLMRSIVDTPA 128 (142)
T ss_dssp HHTTTCCSSSEEEEESCC----------CEESCCCHHHHHHHHHHHHC---
T ss_pred HHhcCCCcCCeEEEEeCC-E-----EEEEEeCCCCHHHHHHHHHHHhcccc
Confidence 999999999999999765 2 22333577889999999999887553
No 52
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.63 E-value=1.5e-15 Score=137.26 Aligned_cols=119 Identities=13% Similarity=0.193 Sum_probs=95.8
Q ss_pred hCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC--cCChh
Q psy8428 44 AKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF--DEGSD 121 (328)
Q Consensus 44 ~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~--~~~~~ 121 (328)
..++|.+||+++|++.+.++ +..++|+|||+ ||++|+.+.|+|+++|+.+... ..++.|+++|+ +++++
T Consensus 10 ~~~~v~~l~~~~f~~~i~~~--~~~vlv~F~a~----wC~~C~~~~p~~~~l~~~~~~~---~~~v~~~~vd~~~~~~~~ 80 (244)
T 3q6o_A 10 PSDPLTLLQADTVRGAVLGS--RSAWAVEFFAS----WCGHCIAFAPTWXALAEDVKAW---RPALYLAALDCAEETNSA 80 (244)
T ss_dssp TTSSSEEECTTTHHHHHSSC--SSEEEEEEECT----TCHHHHHHHHHHHHHHHHTGGG---TTTEEEEEEETTSTTTHH
T ss_pred CCCCceeCChhhHHHHHhhC--CCeEEEEEECC----cCHHHHHHHHHHHHHHHHHHhc---cCcEEEEEEeCCchhhHH
Confidence 35679999999999988533 45799999999 9999999999999999998621 13699999999 66999
Q ss_pred hHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCcc
Q psy8428 122 VFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (328)
Q Consensus 122 lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~i 173 (328)
++++|+|+++||+++|+++++..+.... ..++.+.+++.+++.+.++.+.
T Consensus 81 l~~~~~v~~~Pt~~~~~~g~~~~~g~~~--~~~g~~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 81 VCRDFNIPGFPTVRFFXAFTXNGSGAVF--PVAGADVQTLRERLIDALESHH 130 (244)
T ss_dssp HHHHTTCCSSSEEEEECTTCCSSSCEEC--CCTTCCHHHHHHHHHHHHHTCT
T ss_pred HHHHcCCCccCEEEEEeCCCcCCCCeeE--ecCCCCHHHHHHHHHHHHHhcc
Confidence 9999999999999999987432112222 2356789999999998876543
No 53
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.63 E-value=3.6e-15 Score=115.61 Aligned_cols=102 Identities=15% Similarity=0.209 Sum_probs=85.4
Q ss_pred eEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHc
Q psy8428 48 VLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (328)
Q Consensus 48 VI~L~~-~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l 126 (328)
|.++++ ++|++.+. ..++..+++.|+++ ||++|+.+.|.++++++.+. ++.|+.+|+++++++++++
T Consensus 1 v~~i~~~~~~~~~l~-~~~~~~~~v~f~~~----~C~~C~~~~~~l~~~~~~~~-------~~~~~~v~~~~~~~~~~~~ 68 (104)
T 2vim_A 1 MRVLATAADLEKLIN-ENKGRLIVVDFFAQ----WCGPCRNIAPKVEALAKEIP-------EVEFAKVDVDQNEEAAAKY 68 (104)
T ss_dssp CEECCSHHHHHHHHH-TTTTSCEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TSEEEEEETTTCHHHHHHT
T ss_pred CeecCCHHHHHHHHH-hcCCCeEEEEEECC----CCHHHHHhhHHHHHHHHHCC-------CCEEEEEeccCCHHHHHHc
Confidence 457888 89999875 33456799999999 99999999999999998873 5999999999999999999
Q ss_pred CCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhh
Q psy8428 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (328)
Q Consensus 127 ~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~ 168 (328)
+++++|++++|+.| .......| .+.+++.+|+++.
T Consensus 69 ~v~~~Pt~~~~~~g------~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 69 SVTAMPTFVFIKDG------KEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp TCCSSSEEEEEETT------EEEEEEES-SCHHHHHHHHHHH
T ss_pred CCccccEEEEEeCC------cEEEEEeC-CCHHHHHHHHHhh
Confidence 99999999999865 22333334 6889999999875
No 54
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.8e-15 Score=141.68 Aligned_cols=118 Identities=19% Similarity=0.308 Sum_probs=95.7
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc--CChhh
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD--EGSDV 122 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~--~~~~l 122 (328)
.+.|++||++||++.+.+ .+..++|+|||+ ||++|+.+.|+|+++|+.+. +.+.++.+|++ +++++
T Consensus 16 ~~~vv~lt~~~f~~~i~~--~~~~vlV~F~A~----wC~~C~~~~p~~~~la~~~~------~~~~~~~v~~d~~~~~~l 83 (298)
T 3ed3_A 16 DPHISELTPKSFDKAIHN--TNYTSLVEFYAP----WCGHCKKLSSTFRKAAKRLD------GVVQVAAVNCDLNKNKAL 83 (298)
T ss_dssp CTTCEECCHHHHHHHHTS--SSSCEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTSEEEEEETTSTTTHHH
T ss_pred CCCeEEeCHHHHHHHHHh--CCCeEEEEEECC----CCHHHHHHHHHHHHHHHHcc------CCcEEEEEEccCccCHHH
Confidence 356999999999999843 356799999999 99999999999999999885 35889999988 68999
Q ss_pred HHHcCCCcCceEEEecCCCCC--CC---------CCceeeeecccCHHHHHHHHHhhcCCcce
Q psy8428 123 FQMLRLNTAPIFMHFPAKGKP--KP---------SDTLDIQRVGYSAEAIVKWIADRTDIQIR 174 (328)
Q Consensus 123 f~~l~v~svP~l~~f~p~g~~--~~---------~~~~~~~~~~~~a~~l~~fl~~~t~~~i~ 174 (328)
+++|+|+++||+++|++|+.. .. ........|++++++|.+|+.+.++..+.
T Consensus 84 ~~~~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~ 146 (298)
T 3ed3_A 84 CAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVK 146 (298)
T ss_dssp HHHTTCCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEE
T ss_pred HHhCCCCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccE
Confidence 999999999999999987310 00 01112225789999999999999987653
No 55
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.63 E-value=5.6e-16 Score=121.55 Aligned_cols=101 Identities=14% Similarity=0.152 Sum_probs=72.3
Q ss_pred EEe-ChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcC
Q psy8428 49 LRF-DGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR 127 (328)
Q Consensus 49 I~L-~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~ 127 (328)
.++ ++++|++.+. . +..++|.|||+ ||++|+.+.|.++++++.+. ++.|+++|+++++++.++|+
T Consensus 3 ~~i~~~~~~~~~~~-~--~~~vlv~f~a~----wC~~C~~~~p~~~~~~~~~~-------~~~~~~vd~~~~~~l~~~~~ 68 (105)
T 4euy_A 3 NTFKTIEELATYIE-E--QQLVLLFIKTE----NCGVCDVMLRKVNYVLENYN-------YVEKIEILLQDMQEIAGRYA 68 (105)
T ss_dssp -------CCSSSTT-C--SSEEEEEEEES----SCHHHHHHHHHHHHHHHTCT-------TEEEEEEEECCC--------
T ss_pred cccCCHHHHHHHHh-c--CCCEEEEEeCC----CCcchHHHHHHHHHHHHHcC-------CceEEEEECCCCHHHHHhcC
Confidence 344 3467877762 3 45799999999 99999999999999999872 59999999999999999999
Q ss_pred CCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 128 LNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 128 v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
++++||+++|+.| .......|..+.+++.+++++.+
T Consensus 69 v~~~Pt~~~~~~G------~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 69 VFTGPTVLLFYNG------KEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp -CCCCEEEEEETT------EEEEEEESSCCHHHHHHHHHTTC
T ss_pred CCCCCEEEEEeCC------eEEEEEeCCcCHHHHHHHHHHhh
Confidence 9999999999865 23444457789999999998764
No 56
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.63 E-value=1.1e-15 Score=147.46 Aligned_cols=116 Identities=20% Similarity=0.253 Sum_probs=93.8
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
+.|++||++||++.+. + +..++|.|||+ ||++|+.+.|+|+++|+.+....+..+++.|++||++++++++++
T Consensus 5 ~~v~~l~~~~f~~~~~-~--~~~vlV~F~a~----wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~ 77 (382)
T 2r2j_A 5 SEITSLDTENIDEILN-N--ADVALVNFYAD----WCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQR 77 (382)
T ss_dssp ---CBCCTTTHHHHHH-H--CSEEEEEEECT----TCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHH
T ss_pred CceEECCHHHHHHHHh-c--CCeEEEEEECC----CCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHh
Confidence 4589999999999874 3 34799999999 999999999999999999853222235699999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCcee-eeecccCHHHHHHHHHhhcCCcce
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLD-IQRVGYSAEAIVKWIADRTDIQIR 174 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~-~~~~~~~a~~l~~fl~~~t~~~i~ 174 (328)
++|+++||+++|+.|. ... ...|.+++++|.+|+.+.++..+.
T Consensus 78 ~~v~~~Pt~~~f~~G~------~~~~~~~G~~~~~~l~~~i~~~~~~~v~ 121 (382)
T 2r2j_A 78 YRISKYPTLKLFRNGM------MMKREYRGQRSVKALADYIRQQKSDPIQ 121 (382)
T ss_dssp TTCCEESEEEEEETTE------EEEEECCSCCSHHHHHHHHHHHHSCCCE
T ss_pred cCCCcCCEEEEEeCCc------EeeeeecCcchHHHHHHHHHHhccCCce
Confidence 9999999999998762 122 124788999999999999987653
No 57
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.63 E-value=3.8e-15 Score=119.45 Aligned_cols=107 Identities=17% Similarity=0.245 Sum_probs=87.8
Q ss_pred CeEEeChhhHHHHHHcC-CCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 47 AVLRFDGQKYKEYIKNG-PRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 47 ~VI~L~~~nf~~~v~~~-~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
.+..+++++|++.+.+. .++..++|+||++ ||++|+.+.|.++++++.+. ++.|+.+|++++++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~----~C~~C~~~~~~l~~~~~~~~-------~~~~~~vd~~~~~~~~~~ 82 (122)
T 2vlu_A 14 VISVHSLEQWTMQIEEANTAKKLVVIDFTAS----WCGPCRIMAPVFADLAKKFP-------NAVFLKVDVDELKPIAEQ 82 (122)
T ss_dssp CEEECSHHHHHHHHHHHHHTTCCEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TSEEEEEETTTCHHHHHH
T ss_pred ceeccCHHHHHHHHHHhhccCCEEEEEEECC----CCHHHHHHHHHHHHHHHHCC-------CcEEEEEECCCCHHHHHH
Confidence 46667889999988531 1345799999999 99999999999999999874 399999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCC
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~ 171 (328)
|+++++|++++|+.| .......|.. .+++.+||++.++.
T Consensus 83 ~~v~~~Pt~~~~~~G------~~~~~~~G~~-~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 83 FSVEAMPTFLFMKEG------DVKDRVVGAI-KEELTAKVGLHAAA 121 (122)
T ss_dssp TTCCSSSEEEEEETT------EEEEEEESSC-HHHHHHHHHHHHSC
T ss_pred cCCCcccEEEEEeCC------EEEEEEeCcC-HHHHHHHHHHHhcc
Confidence 999999999999765 2233334556 99999999987653
No 58
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.63 E-value=1.2e-15 Score=150.81 Aligned_cols=112 Identities=15% Similarity=0.175 Sum_probs=96.6
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
+.|++||++||++.+.+..++..++|+|||+ ||++|+.+.|+|+++|+.+. +.+.|+++|++++++++++
T Consensus 1 s~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~----wC~~C~~~~p~~~~~a~~~~------~~v~~~~vd~~~~~~l~~~ 70 (481)
T 3f8u_A 1 SDVLELTDDNFESRISDTGSAGLMLVEFFAP----WCGHAKRLAPEYEAAATRLK------GIVPLAKVDCTANTNTCNK 70 (481)
T ss_dssp CCCEEECTTTHHHHTTCCSSSSEEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTCCEEEEETTTCHHHHHH
T ss_pred CceEEecHHHHHHHHHhCCCCCeEEEEEECC----CCHHHHHhHHHHHHHHHHhc------CceEEEEEECCCCHHHHHh
Confidence 4689999999999985443447899999999 99999999999999999985 3599999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCcc
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~i 173 (328)
+||+++||+++|++|. ......|.++++++.+|+.+.++..+
T Consensus 71 ~~v~~~Ptl~~~~~g~------~~~~~~G~~~~~~l~~~~~~~~~~~~ 112 (481)
T 3f8u_A 71 YGVSGYPTLKIFRDGE------EAGAYDGPRTADGIVSHLKKQAGPAS 112 (481)
T ss_dssp TTCCEESEEEEEETTE------EEEECCSCSSHHHHHHHHHHHTSCSE
T ss_pred cCCCCCCEEEEEeCCc------eeeeecCccCHHHHHHHHHhhcccCc
Confidence 9999999999998762 12233578999999999999998664
No 59
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.63 E-value=2.3e-15 Score=120.18 Aligned_cols=103 Identities=14% Similarity=0.252 Sum_probs=86.4
Q ss_pred CeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 47 AVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 47 ~VI~L~~-~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
+++++++ ++|++.+.+ .++..++|.|||+ ||++|+.+.|.++++++.+ ++.|+.+|+++++++.++
T Consensus 14 ~v~~l~~~~~~~~~l~~-~~~~~~vv~f~a~----wC~~C~~~~~~~~~~~~~~--------~~~~~~vd~~~~~~~~~~ 80 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQ-HKNKLVVVDFFAT----WCGPCKTIAPLFKELSEKY--------DAIFVKVDVDKLEETARK 80 (117)
T ss_dssp EEEECCSTTHHHHHHHH-TTTSCEEEEEECT----TCHHHHHHHHHHHHHHTTS--------SSEEEEEETTTSHHHHHH
T ss_pred eeEEeCCHHHHHHHHHh-CCCCEEEEEEECC----CCHhHHHHhHHHHHHHHHc--------CcEEEEEECCccHHHHHH
Confidence 4899999 999998853 2456799999999 9999999999999999765 489999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
++++++|++++|+.| .......| .+.+++.++|++.+
T Consensus 81 ~~v~~~Pt~~~~~~G------~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 81 YNISAMPTFIAIKNG------EKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp TTCCSSSEEEEEETT------EEEEEEES-SCHHHHHHHHHHHC
T ss_pred cCCCccceEEEEeCC------cEEEEEeC-CCHHHHHHHHHHhC
Confidence 999999999999765 22333334 68899999998753
No 60
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.62 E-value=4.4e-15 Score=120.66 Aligned_cols=107 Identities=21% Similarity=0.267 Sum_probs=87.9
Q ss_pred CCCeEEe-ChhhHHHHHHcC-CCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhh
Q psy8428 45 KKAVLRF-DGQKYKEYIKNG-PRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDV 122 (328)
Q Consensus 45 ~~~VI~L-~~~nf~~~v~~~-~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~l 122 (328)
...|+++ +.++|++.+... .++..++|+|||+ ||++|+.+.|+++++++.+. ++.|+.+|+++++++
T Consensus 15 ~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~----wC~~C~~~~~~l~~l~~~~~-------~v~~~~vd~d~~~~l 83 (124)
T 1xfl_A 15 EGQVIACHTVETWNEQLQKANESKTLVVVDFTAS----WCGPCRFIAPFFADLAKKLP-------NVLFLKVDTDELKSV 83 (124)
T ss_dssp CSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECT----TCHHHHHHHHHHHHHHHHCS-------SEEEEEEETTTSHHH
T ss_pred CCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECC----CCHHHHHHHHHHHHHHHHCC-------CcEEEEEECccCHHH
Confidence 3569999 568999987531 1345799999999 99999999999999999873 599999999999999
Q ss_pred HHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 123 f~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
+++|+++++|++++|+.| .......| .+.+++.++|++.+
T Consensus 84 ~~~~~v~~~Pt~~~~~~G------~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 84 ASDWAIQAMPTFMFLKEG------KILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp HHHTTCCSSSEEEEEETT------EEEEEEES-CCHHHHHHHHHHHC
T ss_pred HHHcCCCccCEEEEEECC------EEEEEEeC-CCHHHHHHHHHHhc
Confidence 999999999999999765 22333334 68899999998764
No 61
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.61 E-value=4.9e-15 Score=122.32 Aligned_cols=109 Identities=11% Similarity=0.160 Sum_probs=87.6
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
+.++++++++|++.+.+..++..++|.|||+ ||++|+.+.|.++++|+.+. ++.|+++|+++++ ++
T Consensus 10 g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~----wC~~C~~~~p~l~~la~~~~-------~v~~~~vd~~~~~---~~ 75 (135)
T 2dbc_A 10 GELREISGNQYVNEVTNAEKDLWVVIHLYRS----SVPMCLVVNQHLSVLARKFP-------ETKFVKAIVNSCI---EH 75 (135)
T ss_dssp CSCEECCHHHHHHHTTTCCSSCEEEEEECCT----TCHHHHHHHHHHHHHHHHCS-------SEEEEEECCSSSC---SS
T ss_pred CceEEcCHHHHHHHHHhcCCCCEEEEEEECC----CChHHHHHHHHHHHHHHHCC-------CcEEEEEEhhcCc---cc
Confidence 3489999999999886443446799999999 99999999999999999873 5999999999986 68
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecc-------cCHHHHHHHHHhhcCCcce
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVG-------YSAEAIVKWIADRTDIQIR 174 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~-------~~a~~l~~fl~~~t~~~i~ 174 (328)
|+|+++||+++|..| +. .+...|. .+.++|.++|++...+..+
T Consensus 76 ~~i~~~Pt~~~~~~G-~~-----v~~~~G~~~~~~~~~~~~~l~~~l~~~~~i~~~ 125 (135)
T 2dbc_A 76 YHDNCLPTIFVYKNG-QI-----EGKFIGIIECGGINLKLEELEWKLSEVGAIQSD 125 (135)
T ss_dssp CCSSCCSEEEEESSS-SC-----SEEEESTTTTTCTTCCHHHHHHHHHHHTSSCCC
T ss_pred CCCCCCCEEEEEECC-EE-----EEEEEeEEeeCCCcCCHHHHHHHHHHcCCcccc
Confidence 999999999999865 22 2222232 3789999999988655433
No 62
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.61 E-value=2.8e-15 Score=132.57 Aligned_cols=109 Identities=13% Similarity=0.199 Sum_probs=93.0
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
..++++++++|++.+. . +..++|.|||+ ||++|+.+.|+++++++.+. +++.|+.+|++++++++++
T Consensus 97 ~~v~~l~~~~f~~~~~-~--~~~vlv~F~a~----wC~~C~~~~p~~~~l~~~~~------~~v~~~~vd~~~~~~l~~~ 163 (210)
T 3apq_A 97 PEIITLERREFDAAVN-S--GELWFVNFYSP----GCSHCHDLAPTWREFAKEVD------GLLRIGAVNCGDDRMLCRM 163 (210)
T ss_dssp TTSEECCHHHHHHHHH-H--SCCEEEEEECT----TCHHHHHHHHHHHHHHHHTB------TTBEEEEEETTTCHHHHHH
T ss_pred CceEEecHHHHHHHHc-c--CCcEEEEEeCC----CChhHHHHHHHHHHHHHHhc------CceEEEEEECCccHHHHHH
Confidence 4589999999999874 2 34699999999 99999999999999999885 4699999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCcc
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~i 173 (328)
++++++||+++|+.| +. .....|..+.+++.+||++.++..+
T Consensus 164 ~~v~~~Pt~~~~~~G-~~-----~~~~~G~~~~~~l~~~i~~~l~~~~ 205 (210)
T 3apq_A 164 KGVNSYPSLFIFRSG-MA-----AVKYNGDRSKESLVAFAMQHVRSTV 205 (210)
T ss_dssp TTCCSSSEEEEECTT-SC-----CEECCSCCCHHHHHHHHHHHHHCCS
T ss_pred cCCCcCCeEEEEECC-Cc-----eeEecCCCCHHHHHHHHHHhCcccc
Confidence 999999999999665 21 2333467889999999999887554
No 63
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.61 E-value=6.5e-15 Score=116.76 Aligned_cols=103 Identities=22% Similarity=0.307 Sum_probs=87.3
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
+....+++++|++.+. . +..++|+|+++ ||++|+.+.|.++++++.+. ++.|+.+|++++++++++
T Consensus 9 ~~~~~~~~~~f~~~~~-~--~k~vlv~f~a~----~C~~C~~~~~~l~~l~~~~~-------~v~~~~vd~~~~~~~~~~ 74 (112)
T 1syr_A 9 MVKIVTSQAEFDSIIS-Q--NELVIVDFFAE----WCGPCKRIAPFYEECSKTYT-------KMVFIKVDVDEVSEVTEK 74 (112)
T ss_dssp CCEEECSHHHHHHHHH-H--CSEEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TSEEEEEETTTTHHHHHH
T ss_pred eEEEECCHHHHHHHHc-c--CCeEEEEEECC----CCHHHHHHHHHHHHHHHHcC-------CCEEEEEECCCCHHHHHH
Confidence 4578899999999885 2 45799999999 99999999999999998873 499999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
++++++|++++|+.| .......|. +.+++.+||++.+
T Consensus 75 ~~v~~~Pt~~~~~~G------~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 75 ENITSMPTFKVYKNG------SSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp TTCCSSSEEEEEETT------EEEEEEESC-CHHHHHHHHHTTC
T ss_pred cCCCcccEEEEEECC------cEEEEEeCC-CHHHHHHHHHHhh
Confidence 999999999999865 223333455 8999999998764
No 64
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.60 E-value=4.9e-15 Score=116.76 Aligned_cols=107 Identities=21% Similarity=0.307 Sum_probs=87.9
Q ss_pred CCCeEEe-ChhhHHHHHHcC-CCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhh
Q psy8428 45 KKAVLRF-DGQKYKEYIKNG-PRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDV 122 (328)
Q Consensus 45 ~~~VI~L-~~~nf~~~v~~~-~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~l 122 (328)
.+.++++ +.++|++.+... .++..++|+||++ ||++|+.+.|.++++++.+. ++.|+.+|+++++++
T Consensus 3 ~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~----~C~~C~~~~~~l~~~~~~~~-------~v~~~~v~~~~~~~~ 71 (113)
T 1ti3_A 3 EGQVIACHTVDTWKEHFEKGKGSQKLIVVDFTAS----WCPPCKMIAPIFAELAKKFP-------NVTFLKVDVDELKAV 71 (113)
T ss_dssp CCCEEEECSHHHHHHHHHHHTTSSSEEEEEEECS----SCHHHHHHHHHHHHHHHHCS-------SEEEEEEETTTCHHH
T ss_pred CCceeEeccHHHHHHHHHHhhhcCCeEEEEEECC----CCHHHHHHHHHHHHHHHhCC-------CcEEEEEEccccHHH
Confidence 3468999 568999988531 2356799999999 99999999999999999873 599999999999999
Q ss_pred HHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 123 f~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
+++|+++++|++++|+.| .......| .+.+++.++|++.+
T Consensus 72 ~~~~~v~~~Pt~~~~~~G------~~~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 72 AEEWNVEAMPTFIFLKDG------KLVDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp HHHHHCSSTTEEEEEETT------EEEEEEEC-CCTTHHHHHHHHHH
T ss_pred HHhCCCCcccEEEEEeCC------EEEEEEec-CCHHHHHHHHHHhh
Confidence 999999999999999765 22333334 68899999998764
No 65
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.60 E-value=8.4e-15 Score=123.14 Aligned_cols=109 Identities=16% Similarity=0.255 Sum_probs=90.7
Q ss_pred CCCeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhH
Q psy8428 45 KKAVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (328)
Q Consensus 45 ~~~VI~L~~-~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (328)
.++++++++ ++|++.+.+ .++..++|+|||+ ||++|+.+.|.++++++.+ +++.|+++|++++++++
T Consensus 11 ~~~v~~l~~~~~~~~~~~~-~~~~~vvv~F~a~----wC~~C~~~~p~l~~l~~~~-------~~v~~~~vd~~~~~~l~ 78 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRL-KAKSLLVVHFWAP----WAPQCAQMNEVMAELAKEL-------PQVSFVKLEAEGVPEVS 78 (153)
T ss_dssp -CCSEEECSHHHHHHHHHH-TTTSCEEEEEECT----TCHHHHHHHHHHHHHHHHC-------TTSEEEEEETTTSHHHH
T ss_pred cCCeEEcCCHHHHHHHHHh-cCCCeEEEEEECC----CCHhHHHHHHHHHHHHHHc-------CCeEEEEEECCCCHHHH
Confidence 456899984 899998753 2456799999999 9999999999999999986 25999999999999999
Q ss_pred HHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc
Q psy8428 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 124 ~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~ 172 (328)
++|+++++|++++|..| + ..... .|.+.+++.+||++.++..
T Consensus 79 ~~~~v~~~Pt~~~~~~G-~-----~~~~~-~G~~~~~l~~~i~~~l~~~ 120 (153)
T 2wz9_A 79 EKYEISSVPTFLFFKNS-Q-----KIDRL-DGAHAPELTKKVQRHASSG 120 (153)
T ss_dssp HHTTCCSSSEEEEEETT-E-----EEEEE-ESSCHHHHHHHHHHHSCTT
T ss_pred HHcCCCCCCEEEEEECC-E-----EEEEE-eCCCHHHHHHHHHHHhccc
Confidence 99999999999999954 2 23332 3467889999999988754
No 66
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.60 E-value=3.3e-15 Score=122.97 Aligned_cols=108 Identities=12% Similarity=0.181 Sum_probs=87.3
Q ss_pred CCCeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhH
Q psy8428 45 KKAVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (328)
Q Consensus 45 ~~~VI~L~~-~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (328)
++.++++++ ++|++.+ +..++..++|.|||+ ||++|+.+.|.++++++.+ ++.|+.+|++++++++
T Consensus 19 ~~~v~~l~~~~~~~~~l-~~~~~k~vvv~F~a~----wC~~C~~~~p~l~~l~~~~--------~v~~~~vd~~~~~~l~ 85 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVF-SSTQNSSIVIKFGAV----WCKPCNKIKEYFKNQLNYY--------YVTLVDIDVDIHPKLN 85 (133)
T ss_dssp TEEEEECCCTTHHHHHH-TC-CCSEEEEEEECT----TCHHHHHTHHHHHGGGGTE--------ECEEEEEETTTCHHHH
T ss_pred CccEEEecChhHHHHHH-HhcCCCEEEEEEECC----CCHHHHHHHHHHHHHHHhc--------CEEEEEEeccchHHHH
Confidence 356999997 7898876 455567899999999 9999999999999988765 3899999999999999
Q ss_pred HHcCCCcCceEEEec--CCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 124 QMLRLNTAPIFMHFP--AKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 124 ~~l~v~svP~l~~f~--p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
++|+++++||+++|. .| + ........| .+.+++.++|++.++
T Consensus 86 ~~~~v~~~Pt~~~~~~~~g-~---g~~~~~~~G-~~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 86 DQHNIKALPTFEFYFNLNN-E---WVLVHTVEG-ANQNDIEKAFQKYCL 129 (133)
T ss_dssp HHTTCCSSSEEEEEEEETT-E---EEEEEEEES-CCHHHHHHHHHHHSE
T ss_pred HhcCCCCCCEEEEEEecCC-C---eEEEEEEcC-CCHHHHHHHHHHHHH
Confidence 999999999999995 44 1 012333334 489999999998764
No 67
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.60 E-value=1.3e-14 Score=129.59 Aligned_cols=109 Identities=17% Similarity=0.264 Sum_probs=93.2
Q ss_pred CeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHc
Q psy8428 47 AVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (328)
Q Consensus 47 ~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l 126 (328)
.+..+++++|++.+.++ ..++|+|||+ ||++|+.+.|+++++|+.+... ..++.|+++|++++++++++|
T Consensus 131 ~~~~~~~~~~~~~~~~~---~~~~v~f~a~----wC~~C~~~~p~~~~~a~~~~~~---~~~v~~~~vd~~~~~~l~~~~ 200 (241)
T 3idv_A 131 VTLVLTKENFDEVVNDA---DIILVEFYAP----WCGHCKKLAPEYEKAAKELSKR---SPPIPLAKVDATAETDLAKRF 200 (241)
T ss_dssp SSEECCTTTHHHHHHHC---SEEEEEEECT----TCTGGGGTHHHHHHHHHHHHTS---SSCCCEEEEETTTCHHHHHHT
T ss_pred cceeccHHHHHHhhccC---CeEEEEEECC----CCHHHHHhHHHHHHHHHHHhcc---CCcEEEEEEECCCCHHHHHHc
Confidence 48889999999988533 3689999999 9999999999999999998631 235999999999999999999
Q ss_pred CCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc
Q psy8428 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 127 ~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~ 172 (328)
+|+++||+++|++| + .+. ..|..+.+++.+|++++++..
T Consensus 201 ~v~~~Pt~~~~~~g-~-----~~~-~~g~~~~~~l~~~l~~~~~~~ 239 (241)
T 3idv_A 201 DVSGYPTLKIFRKG-R-----PYD-YNGPREKYGIVDYMIEQSGAA 239 (241)
T ss_dssp TCCSSSEEEEEETT-E-----EEE-CCSCCSHHHHHHHHHHHTTCT
T ss_pred CCcccCEEEEEECC-e-----EEE-ecCCCCHHHHHHHHHhhhCCC
Confidence 99999999999976 2 233 257889999999999998754
No 68
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.60 E-value=6.2e-15 Score=117.03 Aligned_cols=109 Identities=23% Similarity=0.305 Sum_probs=88.6
Q ss_pred hCCCeEEeC-hhhHHHHHHcC-CCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChh
Q psy8428 44 AKKAVLRFD-GQKYKEYIKNG-PRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD 121 (328)
Q Consensus 44 ~~~~VI~L~-~~nf~~~v~~~-~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~ 121 (328)
..+.+++++ +++|++.+... .++..++|+||++ ||++|+.+.|.++++++.+. ++.|+.+|++++++
T Consensus 4 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~----~C~~C~~~~~~l~~~~~~~~-------~~~~~~v~~~~~~~ 72 (118)
T 2vm1_A 4 EEGAVIACHTKQEFDTHMANGKDTGKLVIIDFTAS----WCGPCRVIAPVFAEYAKKFP-------GAIFLKVDVDELKD 72 (118)
T ss_dssp -CCCEEECCSHHHHHHHHHHHHHHTCCEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TSEEEEEETTTSHH
T ss_pred CCCceEEecCHHHHHHHHHhcccCCCEEEEEEECC----CCHhHHHHhHHHHHHHHHCC-------CcEEEEEEcccCHH
Confidence 345789994 68999988531 1244699999999 99999999999999999873 59999999999999
Q ss_pred hHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 122 VFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 122 lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
+.++|+++++|++++|+.| .......| .+.+++.++|++.++
T Consensus 73 ~~~~~~v~~~Pt~~~~~~g------~~~~~~~g-~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 73 VAEAYNVEAMPTFLFIKDG------EKVDSVVG-GRKDDIHTKIVALMG 114 (118)
T ss_dssp HHHHTTCCSBSEEEEEETT------EEEEEEES-CCHHHHHHHHHHHHC
T ss_pred HHHHcCCCcCcEEEEEeCC------eEEEEecC-CCHHHHHHHHHHHhc
Confidence 9999999999999999765 22333334 688999999998765
No 69
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.60 E-value=2.7e-15 Score=123.60 Aligned_cols=104 Identities=8% Similarity=0.143 Sum_probs=88.8
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC--------
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF-------- 116 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~-------- 116 (328)
.+.++++|+++|++.+. + .++|.|||+ ||++|+.+.|.++++++.+ + +.|+.+|+
T Consensus 15 ~~~v~~l~~~~~~~~~~-~----~vlv~F~a~----wC~~C~~~~p~l~~l~~~~-------~-v~~~~vd~~~~~~~~~ 77 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQ-G----DAILAVYSK----TCPHCHRDWPQLIQASKEV-------D-VPIVMFIWGSLIGERE 77 (135)
T ss_dssp TTEEEECCHHHHHHHHT-S----SEEEEEEET----TCHHHHHHHHHHHHHHTTC-------C-SCEEEEEECTTCCHHH
T ss_pred cCceeecCHHHHHHHhC-C----cEEEEEECC----cCHhhhHhChhHHHHHHHC-------C-CEEEEEECCCchhhhh
Confidence 35699999999999874 2 799999999 9999999999999999876 2 88999999
Q ss_pred -cCChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCC
Q psy8428 117 -DEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (328)
Q Consensus 117 -~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~ 171 (328)
+++++++++|+++++||+++|+.| .......|..+.+.+.+++++.++-
T Consensus 78 ~d~~~~l~~~~~v~~~Pt~~~~~~G------~~v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 78 LSAARLEMNKAGVEGTPTLVFYKEG------RIVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp HHHHHHHHHHHTCCSSSEEEEEETT------EEEEEEESCCCHHHHHHHHHHHC--
T ss_pred hhhhHHHHHHcCCceeCeEEEEcCC------EEEEEEeCCCCHHHHHHHHHHHhCC
Confidence 889999999999999999999965 2344446778899999999988764
No 70
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.59 E-value=6.5e-15 Score=146.59 Aligned_cols=114 Identities=19% Similarity=0.291 Sum_probs=96.2
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (328)
+++|++||++||++.+. . +..++|.|||+ ||++|+.+.|+|+++|+.+.. .++.|++||+++++++++
T Consensus 13 ~~~v~~l~~~~f~~~~~-~--~~~~lv~F~a~----wC~~C~~~~p~~~~~a~~~~~-----~~v~~~~vd~~~~~~l~~ 80 (504)
T 2b5e_A 13 DSAVVKLATDSFNEYIQ-S--HDLVLAEFFAP----WCGHCKNMAPEYVKAAETLVE-----KNITLAQIDCTENQDLCM 80 (504)
T ss_dssp TSSCEECCTTTHHHHHT-T--CSEEEEEEECT----TCHHHHHHHHHHHHHHHHTTT-----TTCEEEEEETTTCHHHHH
T ss_pred CCCcEECCHHHHHHHHh-c--CCeEEEEEECC----CCHHHHHhHHHHHHHHHHhcc-----CCeEEEEEECCCCHHHHH
Confidence 46799999999999873 3 45799999999 999999999999999999852 259999999999999999
Q ss_pred HcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCcce
Q psy8428 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQIR 174 (328)
Q Consensus 125 ~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~i~ 174 (328)
+|+|+++||+++|++|.. . . .....|.+++++|.+|+.+.++..+.
T Consensus 81 ~~~v~~~Pt~~~~~~g~~-~--~-~~~~~G~~~~~~l~~~l~~~~~~~v~ 126 (504)
T 2b5e_A 81 EHNIPGFPSLKIFKNSDV-N--N-SIDYEGPRTAEAIVQFMIKQSQPAVA 126 (504)
T ss_dssp HTTCCSSSEEEEEETTCT-T--C-EEECCSCCSHHHHHHHHHHHTSCSEE
T ss_pred hcCCCcCCEEEEEeCCcc-c--c-ceeecCCCCHHHHHHHHHHhcCCcce
Confidence 999999999999998621 0 0 22234788999999999999987653
No 71
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.59 E-value=5.9e-15 Score=124.16 Aligned_cols=119 Identities=13% Similarity=0.108 Sum_probs=89.8
Q ss_pred ChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcCCCcC
Q psy8428 52 DGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRLNTA 131 (328)
Q Consensus 52 ~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~v~sv 131 (328)
++++|++.+.+ ..+..++|.|||+ ||++|+.+.|.++++++.+. +++.|+++|+++++++.++|+|+++
T Consensus 10 ~~~~~~~~i~~-~~~k~vlv~F~a~----WC~~C~~~~p~l~~l~~~~~------~~~~~~~vd~d~~~~l~~~~~v~~~ 78 (149)
T 3gix_A 10 SKKEVDQAIKS-TAEKVLVLRFGRD----EDPVCLQLDDILSKTSSDLS------KMAAIYLVDVDQTAVYTQYFDISYI 78 (149)
T ss_dssp SHHHHHHHHHH-CCSSEEEEEEECT----TSHHHHHHHHHHHHHHTTTT------TTEEEEEEETTTCCHHHHHTTCCSS
T ss_pred CHHHHHHHHHh-cCCCEEEEEEECC----CCHHHHHHHHHHHHHHHHcc------CceEEEEEECCcCHHHHHHcCCCcc
Confidence 56899998752 2355799999999 99999999999999998874 4599999999999999999999999
Q ss_pred ceEEEecCCCCC----CCCCceeeeec-ccCHHHHHHHHHhhcC----CcceeeCCCCCc
Q psy8428 132 PIFMHFPAKGKP----KPSDTLDIQRV-GYSAEAIVKWIADRTD----IQIRVFRPPNYS 182 (328)
Q Consensus 132 P~l~~f~p~g~~----~~~~~~~~~~~-~~~a~~l~~fl~~~t~----~~i~i~~p~~~~ 182 (328)
||+++|++|... ...+. +...| ..+.+++.+++++... -.-.+..|.+|+
T Consensus 79 Pt~~~~~~G~~v~~~~g~~~~-~~~~G~~~~~~~l~~~l~~~~~~~~~g~~~~~s~~~~~ 137 (149)
T 3gix_A 79 PSTVFFFNGQHMKVDYGSPDH-TKFVGSFKTKQDFIDLIEVIYRGAMRGKLIVQSPIDPK 137 (149)
T ss_dssp SEEEEEETTEEEEEECSSSCC-SCEESCCSSHHHHHHHHHHHHHHHHTTCSEEECCSCGG
T ss_pred CeEEEEECCeEEEeecCCCCC-CeEeeecCCHHHHHHHHHHHHHHhhcCCceEECCcccc
Confidence 999999876211 00000 22346 6788999999987532 112344566665
No 72
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.59 E-value=1.1e-14 Score=115.33 Aligned_cols=100 Identities=19% Similarity=0.186 Sum_probs=83.0
Q ss_pred eEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcC
Q psy8428 48 VLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR 127 (328)
Q Consensus 48 VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~ 127 (328)
.-..++++|++.+. . +..++|.|||+ ||++|+.+.|.++++++.+. ++.|+.+|+++++++.++++
T Consensus 9 ~~~~~~~~f~~~~~-~--~k~vlv~f~a~----wC~~C~~~~p~l~~l~~~~~-------~~~~~~vd~~~~~~l~~~~~ 74 (109)
T 3f3q_A 9 TQFKTASEFDSAIA-Q--DKLVVVDFYAT----WCGPCKMIAPMIEKFSEQYP-------QADFYKLDVDELGDVAQKNE 74 (109)
T ss_dssp EECCSHHHHHHHTT-S--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TSEEEEEETTTCHHHHHHTT
T ss_pred cCCCCHHHHHHHHh-c--CCEEEEEEECC----cCHhHHHHHHHHHHHHHHCC-------CCEEEEEECCCCHHHHHHcC
Confidence 34566789998864 3 45799999999 99999999999999999874 49999999999999999999
Q ss_pred CCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhh
Q psy8428 128 LNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (328)
Q Consensus 128 v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~ 168 (328)
++++|++++|+.| .......| .+.+++.++|++.
T Consensus 75 v~~~Pt~~~~~~G------~~~~~~~G-~~~~~l~~~i~~~ 108 (109)
T 3f3q_A 75 VSAMPTLLLFKNG------KEVAKVVG-ANPAAIKQAIAAN 108 (109)
T ss_dssp CCSSSEEEEEETT------EEEEEEES-SCHHHHHHHHHHH
T ss_pred CCccCEEEEEECC------EEEEEEeC-CCHHHHHHHHHhh
Confidence 9999999999855 22333334 4789999999875
No 73
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.59 E-value=8.9e-15 Score=130.64 Aligned_cols=109 Identities=11% Similarity=0.207 Sum_probs=93.4
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
..+..+|+++|++.+.++ +..++|.|||+ ||++|+.+.|.++++++.+. +++.|+.+|++++++++++
T Consensus 12 ~~~~~lt~~~f~~~v~~~--~k~vvv~F~a~----wC~~C~~~~p~l~~l~~~~~------~~v~~~~vd~d~~~~l~~~ 79 (222)
T 3dxb_A 12 DKIIHLTDDSFDTDVLKA--DGAILVDFWAE----WCGPCKMIAPILDEIADEYQ------GKLTVAKLNIDQNPGTAPK 79 (222)
T ss_dssp CCCEECCTTTHHHHHTTC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTCEEEEEETTTCTTTGGG
T ss_pred CCceeCCHHHHHHHHHhc--CCEEEEEEECC----cCHHHHHHHHHHHHHHHHhc------CCcEEEEEECCCCHHHHHH
Confidence 458999999999976543 45799999999 99999999999999999885 4599999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~ 172 (328)
|+|+++||+++|+.| .......|..+.+++.+|+++.+...
T Consensus 80 ~~v~~~Pt~~~~~~G------~~~~~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 80 YGIRGIPTLLLFKNG------EVAATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp GTCCSBSEEEEEETT------EEEEEEESCCCHHHHHHHHHHHSCCS
T ss_pred cCCCcCCEEEEEECC------eEEEEeccccChHHHHHHHHhhcccc
Confidence 999999999999865 22334457789999999999988644
No 74
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.59 E-value=7.5e-15 Score=118.39 Aligned_cols=106 Identities=19% Similarity=0.311 Sum_probs=87.6
Q ss_pred CCCeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhH
Q psy8428 45 KKAVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (328)
Q Consensus 45 ~~~VI~L~~-~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (328)
...+.++++ ++|++.+ +. +..++|+|+++ ||++|+.+.|.++++++.+.. .++.|+.+|+++++++.
T Consensus 14 ~~~~~~i~~~~~f~~~l-~~--~k~vvv~f~a~----~C~~C~~~~~~l~~l~~~~~~-----~~v~~~~vd~d~~~~~~ 81 (121)
T 2j23_A 14 RGSVQVISSYDQFKQVT-GG--DKVVVIDFWAT----WCGPCKMIGPVFEKISDTPAG-----DKVGFYKVDVDEQSQIA 81 (121)
T ss_dssp CCCEEECCSHHHHHHHH-SS--SSCEEEEEECT----TCSTHHHHHHHHHHHHTSTHH-----HHSEEEEEETTTCHHHH
T ss_pred CcceEEcCCHHHHHHHH-cC--CCEEEEEEECC----CCHhHHHHHHHHHHHHHHCcC-----CcEEEEEEECcCCHHHH
Confidence 456888888 7999987 33 45799999999 999999999999999988752 13999999999999999
Q ss_pred HHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 124 ~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
++|+++++|++++|++| .......|. +.+++.+||++.+
T Consensus 82 ~~~~v~~~Pt~~~~~~G------~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 82 QEVGIRAMPTFVFFKNG------QKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp HHHTCCSSSEEEEEETT------EEEEEEESS-CHHHHHHHHHHHT
T ss_pred HHcCCCcccEEEEEECC------eEEeeEcCC-CHHHHHHHHHHhh
Confidence 99999999999999765 223333455 8999999998764
No 75
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.59 E-value=6.7e-15 Score=131.45 Aligned_cols=112 Identities=15% Similarity=0.246 Sum_probs=94.6
Q ss_pred hCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhH
Q psy8428 44 AKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (328)
Q Consensus 44 ~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (328)
.+++|++||+++|++.+. . +..++|+|||+ ||++|+++.|+++++|+.+... +.++.|+.+|++++++++
T Consensus 13 ~~~~v~~l~~~~~~~~~~-~--~~~v~v~F~a~----wC~~C~~~~p~~~~~~~~~~~~---~~~~~~~~vd~~~~~~l~ 82 (241)
T 3idv_A 13 EENGVLVLNDANFDNFVA-D--KDTVLLEFYAP----WCGHCKQFAPEYEKIANILKDK---DPPIPVAKIDATSASVLA 82 (241)
T ss_dssp EETTEEEECTTTHHHHHT-T--CSEEEEEEECT----TCHHHHHHHHHHHHHHHHHHTS---SSCCCEEEEETTTCHHHH
T ss_pred cCCCcEEecccCHHHHHh-c--CCeEEEEEECC----CCHHHHHhhHHHHHHHHHHhhc---CCceEEEEEeccCCHHHH
Confidence 346799999999999874 3 44699999999 9999999999999999998631 234999999999999999
Q ss_pred HHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc
Q psy8428 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 124 ~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~ 172 (328)
++|+|+++||+++|++|+ ..+ ..|+.+.+++.+|+.+.++..
T Consensus 83 ~~~~v~~~Pt~~~~~~g~------~~~-~~g~~~~~~l~~~i~~~~~~~ 124 (241)
T 3idv_A 83 SRFDVSGYPTIKILKKGQ------AVD-YEGSRTQEEIVAKVREVSQPD 124 (241)
T ss_dssp HHTTCCSSSEEEEEETTE------EEE-CCSCSCHHHHHHHHHHHHSTT
T ss_pred HhcCCCcCCEEEEEcCCC------ccc-ccCcccHHHHHHHHhhccCcc
Confidence 999999999999998762 233 247889999999999987653
No 76
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.57 E-value=1.5e-14 Score=138.90 Aligned_cols=112 Identities=16% Similarity=0.208 Sum_probs=93.3
Q ss_pred hCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhH------HHHHHHHHHcccccCCCCcEEEEEEECc
Q psy8428 44 AKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSAS------DEYTIVANSFRYSQMYSNKLFFILVDFD 117 (328)
Q Consensus 44 ~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~------pef~~vA~s~~~~~~~~~~v~F~~vD~~ 117 (328)
.+++|++||++||++.+. + +..++|.|||+ ||++|+... |+|+++|+.+.. .++.|++||++
T Consensus 11 ~~~~v~~lt~~~f~~~i~-~--~~~vlV~FyAp----WC~~~~~~~~l~~~~p~~e~~a~~~~~-----~~v~~~~Vd~~ 78 (367)
T 3us3_A 11 GVDRVINVNAKNYKNVFK-K--YEVLALLYHEP----PEDDKASQRQFEMEELILELAAQVLED-----KGVGFGLVDSE 78 (367)
T ss_dssp CCCCCEECCTTTHHHHHH-H--CSEEEEEEECC----CCSSHHHHHHHHHHHHHHHHHHHHHTT-----TTEEEEEEETT
T ss_pred CCCccEECCHHHHHHHHh-h--CCeEEEEEECC----CchhHHHhhhhccccHHHHHHHHHhhc-----CCceEEEEeCc
Confidence 356799999999999985 3 34699999999 999974433 799999998852 35999999999
Q ss_pred CChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCcce
Q psy8428 118 EGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQIR 174 (328)
Q Consensus 118 ~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~i~ 174 (328)
++++++++|+|+++||+++|+.| + ..++ .|++++++|.+|+.++++..+.
T Consensus 79 ~~~~l~~~~~V~~~PTl~~f~~G-~-----~~~y-~G~~~~~~i~~~i~~~~~~~v~ 128 (367)
T 3us3_A 79 KDAAVAKKLGLTEEDSIYVFKED-E-----VIEY-DGEFSADTLVEFLLDVLEDPVE 128 (367)
T ss_dssp TTHHHHHHHTCCSTTEEEEEETT-E-----EEEC-CSCCSHHHHHHHHHHHHSCSEE
T ss_pred ccHHHHHHcCCCcCceEEEEECC-c-----EEEe-CCCCCHHHHHHHHHHhcCCCcE
Confidence 99999999999999999999975 2 1222 4789999999999999887653
No 77
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.57 E-value=9.1e-15 Score=120.21 Aligned_cols=108 Identities=17% Similarity=0.260 Sum_probs=87.7
Q ss_pred CCCeEEeC-hhhHHHHHHcC-CCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhh
Q psy8428 45 KKAVLRFD-GQKYKEYIKNG-PRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDV 122 (328)
Q Consensus 45 ~~~VI~L~-~~nf~~~v~~~-~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~l 122 (328)
.+++++++ +++|++.+... .++..++|.|||+ ||++|+.+.|.++++++.+. ++.|+.+|+++++++
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~----wC~~C~~~~~~l~~l~~~~~-------~v~~~~v~~~~~~~~ 91 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSAR----WCGPSRQIAPYYIELSENYP-------SLMFLVIDVDELSDF 91 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TSEEEEEETTTSHHH
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECC----CCHHHHHHHHHHHHHHHHCC-------CCEEEEEeCcccHHH
Confidence 34688886 68999987421 1245699999999 99999999999999998873 599999999999999
Q ss_pred HHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 123 f~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
.++|+++++||+++++.| + ......|. +.+++.++|++.++
T Consensus 92 ~~~~~v~~~Pt~~~~~~G-~-----~~~~~~G~-~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 92 SASWEIKATPTFFFLRDG-Q-----QVDKLVGA-NKPELHKKITAILD 132 (139)
T ss_dssp HHHTTCCEESEEEEEETT-E-----EEEEEESC-CHHHHHHHHHHHHH
T ss_pred HHHcCCCcccEEEEEcCC-e-----EEEEEeCC-CHHHHHHHHHHHhc
Confidence 999999999999999655 2 23333344 88999999998765
No 78
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.56 E-value=2e-14 Score=136.72 Aligned_cols=111 Identities=14% Similarity=0.246 Sum_probs=94.1
Q ss_pred hCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHH-------HHHHHHHcccccCCCCcEEEEEEEC
Q psy8428 44 AKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDE-------YTIVANSFRYSQMYSNKLFFILVDF 116 (328)
Q Consensus 44 ~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pe-------f~~vA~s~~~~~~~~~~v~F~~vD~ 116 (328)
.++.|++||++||++.+. . +..++|.|||+ ||+ |+.+.|+ |+++|+.+.. .++.|++||+
T Consensus 9 ~~~~v~~l~~~~f~~~i~-~--~~~~lV~F~a~----wC~-c~~~~p~~~~~~~~~~~~a~~~~~-----~~v~~~~Vd~ 75 (350)
T 1sji_A 9 GKDRVVSLTEKNFKQVLK-K--YDVLCLYYHES----VSS-DKVAQKQFQLKEIVLELVAQVLEH-----KDIGFVMVDA 75 (350)
T ss_dssp CCCCCEEECHHHHHHHHT-T--CSEEEEEEECC----SCS-SSTTSHHHHHHHHHHHHHHHHGGG-----SSEEEEEEET
T ss_pred CCCccEECCHHHHHHHHh-h--CCeEEEEEECC----CCc-chhhCchhhhhhHHHHHHHHHHhh-----cCcEEEEEeC
Confidence 346799999999999874 3 34799999999 999 9999999 9999988852 2599999999
Q ss_pred cCChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCcce
Q psy8428 117 DEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQIR 174 (328)
Q Consensus 117 ~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~i~ 174 (328)
+++++++++++|+++||+++|++|. ... ..|++++++|.+|+.+.++..+.
T Consensus 76 ~~~~~l~~~~~v~~~Pt~~~~~~g~------~~~-~~G~~~~~~l~~~i~~~~~~~~~ 126 (350)
T 1sji_A 76 KKEAKLAKKLGFDEEGSLYVLKGDR------TIE-FDGEFAADVLVEFLLDLIEDPVE 126 (350)
T ss_dssp TTTHHHHHHHTCCSTTEEEEEETTE------EEE-ECSCCCHHHHHHHHHTTSSCSEE
T ss_pred CCCHHHHHhcCCCccceEEEEECCc------EEE-ecCCCCHHHHHHHHHHhcCCcce
Confidence 9999999999999999999998762 122 24789999999999999986653
No 79
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.56 E-value=1.6e-14 Score=120.51 Aligned_cols=119 Identities=18% Similarity=0.200 Sum_probs=86.8
Q ss_pred ChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcCCCcC
Q psy8428 52 DGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRLNTA 131 (328)
Q Consensus 52 ~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~v~sv 131 (328)
++++|++.+.+ ..+..++|.|||+ ||++|+.+.|.++++++.+. +++.|+++|+++++++.++|+|+++
T Consensus 10 ~~~~~~~~v~~-~~~k~vlv~F~a~----wC~~C~~~~p~l~~l~~~~~------~~v~~~~vd~d~~~~~~~~~~i~~~ 78 (142)
T 1qgv_A 10 NGWQVDQAILS-EEDRVVVIRFGHD----WDPTCMKMDEVLYSIAEKVK------NFAVIYLVDITEVPDFNKMYELYDP 78 (142)
T ss_dssp SHHHHHHHHHT-CSSSEEEEEEECT----TSHHHHHHHHHHHHHHHHHT------TTEEEEEEETTTCCTTTTSSCSCSS
T ss_pred CHHHHHHHHHh-cCCCEEEEEEECC----CCHHHHHHHHHHHHHHHHhC------CCeEEEEEccccCHHHHHHcCCCCC
Confidence 46789887753 1356799999999 99999999999999999885 4699999999999999999999999
Q ss_pred ceEEEecCCCCCC----CCCceeeeeccc-CHHHHHHHHHhhcC----CcceeeCCCCCc
Q psy8428 132 PIFMHFPAKGKPK----PSDTLDIQRVGY-SAEAIVKWIADRTD----IQIRVFRPPNYS 182 (328)
Q Consensus 132 P~l~~f~p~g~~~----~~~~~~~~~~~~-~a~~l~~fl~~~t~----~~i~i~~p~~~~ 182 (328)
||+++|++|+... ..+...+ .+.. +.+++.++|++... -.--+.-|-+|+
T Consensus 79 Pt~~~~~~G~~v~~~~g~~~~~~~-~g~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~ 137 (142)
T 1qgv_A 79 CTVMFFFRNKHIMIDLGTGNNNKI-NWAMEDKQEMVDIIETVYRGARKGRGLVVSPKDYS 137 (142)
T ss_dssp CEEEEEETTEEEEEECC------C-CSCCSCHHHHHHHHHHHHHHHTTTCSEEECCCCCC
T ss_pred CEEEEEECCcEEEEecCCCCccee-eeecCcHHHHHHHHHHHHHHHhcCCeEEeCCCCcc
Confidence 9999998762110 0000111 2334 38889888876543 112234566665
No 80
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.56 E-value=9.1e-15 Score=118.19 Aligned_cols=109 Identities=15% Similarity=0.211 Sum_probs=88.9
Q ss_pred CCeEEeChhhHH-----HHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEE--CcC
Q psy8428 46 KAVLRFDGQKYK-----EYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVD--FDE 118 (328)
Q Consensus 46 ~~VI~L~~~nf~-----~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD--~~~ 118 (328)
.++.+++.++|+ +. ..++..++|+|||+ ||++|+.+.|+++++++.+. +++.|+.+| +++
T Consensus 4 ~~~~~l~~~~~~~~~~~~~---~~~~k~~lv~f~a~----wC~~C~~~~~~l~~~~~~~~------~~v~~~~v~~~~d~ 70 (126)
T 2l57_A 4 EGIKQINFQSINVVENLEE---AKEGIPTIIMFKTD----TCPYCVEMQKELSYVSKERE------GKFNIYYARLEEEK 70 (126)
T ss_dssp CCSSCTTTTCCSEESSTTT---CCSSSCEEEEEECS----SCHHHHHHHHHHHHHHHHSS------SSCEEEEEETTSSH
T ss_pred cccCCCCccccchhHHHHH---HhCCCcEEEEEECC----CCccHHHHHHHHHHHHHHhc------CCeEEEEEeCCCCc
Confidence 346677777776 32 23355799999999 99999999999999999884 469999999 999
Q ss_pred ChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc
Q psy8428 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 119 ~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~ 172 (328)
++++.++|+++++|++++|.++|+ ......|..+.+++.++|++.++.+
T Consensus 71 ~~~~~~~~~v~~~Pt~~~~~~~G~-----~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 71 NIDLAYKYDANIVPTTVFLDKEGN-----KFYVHQGLMRKNNIETILNSLGVKE 119 (126)
T ss_dssp HHHHHHHTTCCSSSEEEEECTTCC-----EEEEEESCCCHHHHHHHHHHHCCCC
T ss_pred hHHHHHHcCCcceeEEEEECCCCC-----EEEEecCCCCHHHHHHHHHHHhccc
Confidence 999999999999999999996543 2333356788999999999987754
No 81
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.56 E-value=1.6e-14 Score=114.55 Aligned_cols=101 Identities=12% Similarity=0.117 Sum_probs=82.4
Q ss_pred EEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcCC
Q psy8428 49 LRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRL 128 (328)
Q Consensus 49 I~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~v 128 (328)
..+++++| +.+. . +..++|.|||+ ||++|+.+.|.++++++.+. ++.|+++|+++++++.+++++
T Consensus 6 ~~~~~~~f-~~~~-~--~~~~vv~f~a~----wC~~C~~~~~~l~~~~~~~~-------~v~~~~vd~~~~~~l~~~~~v 70 (110)
T 2l6c_A 6 DITTEAGM-AHFE-G--LSDAIVFFHKN----LCPHCKNMEKVLDKFGARAP-------QVAISSVDSEARPELMKELGF 70 (110)
T ss_dssp BCGGGCSH-HHHT-T--CSEEEEEEECS----SCSTHHHHHHHHHHHHTTCT-------TSCEEEEEGGGCHHHHHHTTC
T ss_pred ecCCHHHH-HHHH-c--CCCEEEEEECC----CCHhHHHHHHHHHHHHHHCC-------CcEEEEEcCcCCHHHHHHcCC
Confidence 45778999 5553 3 34689999999 99999999999999998762 589999999999999999999
Q ss_pred CcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 129 NTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 129 ~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
+++|++++|+.| .......|..+.++|.+++++..+
T Consensus 71 ~~~Pt~~~~~~G------~~v~~~~G~~~~~~l~~~~~~~~~ 106 (110)
T 2l6c_A 71 ERVPTLVFIRDG------KVAKVFSGIMNPRELQALYASIHH 106 (110)
T ss_dssp CSSCEEEEEESS------SEEEEEESCCCHHHHHHHHHTC--
T ss_pred cccCEEEEEECC------EEEEEEcCCCCHHHHHHHHHHHhh
Confidence 999999999665 233444566899999999988754
No 82
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.54 E-value=2.3e-14 Score=118.00 Aligned_cols=107 Identities=18% Similarity=0.193 Sum_probs=88.2
Q ss_pred eEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcC
Q psy8428 48 VLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR 127 (328)
Q Consensus 48 VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~ 127 (328)
|+++|++||++.+ ++ +..++|+|||+ |++|+.+.|.++++|+.|. +++.|+++|.++++++.++||
T Consensus 8 v~~~t~~~f~~~~-~~--~~pv~v~f~a~-----~~~c~~~~p~l~~~A~~~~------gk~~f~~vd~d~~~~~a~~~g 73 (133)
T 2djk_A 8 IGEIGPETYSDYM-SA--GIPLAYIFAET-----AEERKELSDKLKPIAEAQR------GVINFGTIDAKAFGAHAGNLN 73 (133)
T ss_dssp SEECCHHHHHHHH-HT--TSCEEEEECSC-----SSSHHHHHHHHHHHHHSST------TTSEEEEECTTTTGGGTTTTT
T ss_pred eeccChHHHHHHh-cC--CCCEEEEEecC-----hhhHHHHHHHHHHHHHHhC------CeEEEEEEchHHhHHHHHHcC
Confidence 7899999999886 34 45699999996 6899999999999999985 579999999999999999999
Q ss_pred CCc--CceEEEecCCCCCCCCCceee-eecccCHHHHHHHHHhhcCCc
Q psy8428 128 LNT--APIFMHFPAKGKPKPSDTLDI-QRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 128 v~s--vP~l~~f~p~g~~~~~~~~~~-~~~~~~a~~l~~fl~~~t~~~ 172 (328)
|++ +|++++|..++. ..|.. ..+..+.++|.+|+++.+.-.
T Consensus 74 i~~~~iPtl~i~~~~~g----~~~~~~~~g~~~~~~l~~fi~~~l~Gk 117 (133)
T 2djk_A 74 LKTDKFPAFAIQEVAKN----QKFPFDQEKEITFEAIKAFVDDFVAGK 117 (133)
T ss_dssp CCSSSSSEEEEECTTTC----CBCCCCSSSCCCHHHHHHHHHHHHHTC
T ss_pred CCcccCCEEEEEecCcC----cccCCCCccccCHHHHHHHHHHHHcCC
Confidence 999 999999986211 12322 126778999999999877433
No 83
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.54 E-value=2.5e-14 Score=116.34 Aligned_cols=87 Identities=17% Similarity=0.360 Sum_probs=75.9
Q ss_pred CCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcCCCcCceEEEecCCCCCC
Q psy8428 65 RNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPK 144 (328)
Q Consensus 65 r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~v~svP~l~~f~p~g~~~ 144 (328)
++..++|.|||+ ||++|+.+.|+++++++.+. +++.|+.+|++++++++++|+++++|++++|+.|
T Consensus 41 ~~k~vlv~F~a~----wC~~C~~~~p~l~~~~~~~~------~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G---- 106 (128)
T 3ul3_B 41 KNTVIVLYFFAK----WCQACTMQSTEMDKLQKYYG------KRIYLLKVDLDKNESLARKFSVKSLPTIILLKNK---- 106 (128)
T ss_dssp CCSEEEEEEECT----TCHHHHHHHHHHHHHHHHHG------GGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETT----
T ss_pred cCCEEEEEEECC----CCHHHHHHhHHHHHHHHHhc------CCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECC----
Confidence 356799999999 99999999999999999885 4699999999999999999999999999999765
Q ss_pred CCCceeeeecccCHHHHHHHHHh
Q psy8428 145 PSDTLDIQRVGYSAEAIVKWIAD 167 (328)
Q Consensus 145 ~~~~~~~~~~~~~a~~l~~fl~~ 167 (328)
.......|..+.+++.+||++
T Consensus 107 --~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 107 --TMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp --EEEEEESSCCCHHHHHHHHTT
T ss_pred --EEEEEecCCCCHHHHHHHHHh
Confidence 233444567899999999975
No 84
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.53 E-value=5.3e-14 Score=113.11 Aligned_cols=110 Identities=21% Similarity=0.272 Sum_probs=86.0
Q ss_pred CCeEEe--ChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhH
Q psy8428 46 KAVLRF--DGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (328)
Q Consensus 46 ~~VI~L--~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (328)
+.++++ +.++|++.+.+. +..++|.|||+ ||++|+.+.|.++++++.+ +++.|+.+|+++++++.
T Consensus 3 ~~v~~~~g~~~~~~~~~~~~--~~~vlv~f~a~----wC~~C~~~~~~l~~l~~~~-------~~v~~~~vd~~~~~~~~ 69 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIKEA--PGLVLVDFFAT----WCGPCQRLGQILPSIAEAN-------KDVTFIKVDVDKNGNAA 69 (118)
T ss_dssp CCSEEECSCHHHHHHHHHHC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHC-------TTSEEEEEETTTCHHHH
T ss_pred CcceEecCCHHHHHHHHHhC--CCEEEEEEECC----CCHHHHHHHHHHHHHHHHC-------CCeEEEEEECCCCHHHH
Confidence 457888 578998666433 44699999999 9999999999999999887 25999999999999999
Q ss_pred HHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCC
Q psy8428 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (328)
Q Consensus 124 ~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~ 171 (328)
++|+++++|++++|+++|+ ++...... .|...+++.+.+.+....
T Consensus 70 ~~~~i~~~Pt~~~~~~~~~--~G~~~~~~-~G~~~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 70 DAYGVSSIPALFFVKKEGN--EIKTLDQF-VGADVSRIKADIEKFKHH 114 (118)
T ss_dssp HHTTCCSSSEEEEEEEETT--EEEEEEEE-ESCCHHHHHHHHHHHC--
T ss_pred HhcCCCCCCEEEEEeCCCC--cceEEEee-cCCCHHHHHHHHHHhhhc
Confidence 9999999999999987221 11233332 356677799999887543
No 85
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.53 E-value=3e-14 Score=113.93 Aligned_cols=100 Identities=19% Similarity=0.298 Sum_probs=81.0
Q ss_pred CeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 47 AVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 47 ~VI~L~~-~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
.+.++++ ++|++.+. . +..++|.|||+ ||++|+++.|.++++++.+. ++.|+.+|+++++++.++
T Consensus 13 ~~~~~~~~~~~~~~~~-~--~k~vvv~F~a~----wC~~C~~~~p~l~~~~~~~~-------~v~~~~vd~~~~~~l~~~ 78 (114)
T 2oe3_A 13 SITKLTNLTEFRNLIK-Q--NDKLVIDFYAT----WCGPCKMMQPHLTKLIQAYP-------DVRFVKCDVDESPDIAKE 78 (114)
T ss_dssp GSCBCCSHHHHHHHHH-H--CSEEEEEEECT----TCHHHHHTHHHHHHHHHHCT-------TSEEEEEETTTCHHHHHH
T ss_pred heeecCCHHHHHHHHh-C--CCEEEEEEECC----CCHHHHHHHHHHHHHHHHCC-------CCEEEEEECCCCHHHHHH
Confidence 4667776 45666654 3 34699999999 99999999999999999874 399999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHh
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIAD 167 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~ 167 (328)
++++++|++++|+.| .......|.. .+++.++|++
T Consensus 79 ~~v~~~Pt~~~~~~G------~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 79 CEVTAMPTFVLGKDG------QLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp TTCCSBSEEEEEETT------EEEEEEESSC-HHHHHHHHHT
T ss_pred CCCCcccEEEEEeCC------eEEEEEeCCC-HHHHHHHHHh
Confidence 999999999999765 2233334555 8999999875
No 86
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.53 E-value=5.8e-14 Score=128.25 Aligned_cols=111 Identities=11% Similarity=0.205 Sum_probs=89.5
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEe--eCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC----
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFT--ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE---- 118 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ft--A~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~---- 118 (328)
.++|++||++||++.+ ++ +.+++|.|| |+ ||+ +.|+|+++|+.+... .+++.|++||+++
T Consensus 15 ~~~v~~Lt~~nF~~vi-~~--~~~vlV~Fy~~Ap----WCg----l~P~~e~lA~~~~~~---~~~v~~akVD~d~~g~~ 80 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTV-ER--FPYSVVKFDIASP----YGE----KHEAFTAFSKSAHKA---TKDLLIATVGVKDYGEL 80 (248)
T ss_dssp CTTCEECCTTTHHHHH-TT--SSEEEEEEEESSC----CSH----HHHHHHHHHHHHHHH---CSSEEEEEEEECSSTTC
T ss_pred CCCcEECCHHHHHHHH-hc--CCCEEEEEECCCC----CCc----cHHHHHHHHHHHhcc---CCCeEEEEEECCccccc
Confidence 4569999999999965 33 457999999 99 998 999999999998520 1469999999999
Q ss_pred -ChhhHHHcCCC--cCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc
Q psy8428 119 -GSDVFQMLRLN--TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 119 -~~~lf~~l~v~--svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~ 172 (328)
+++++++|+|+ ++||+++|+ | +..+...|+ ..|+++.++|.+||+++++..
T Consensus 81 ~n~~la~~~~V~~~~~PTl~~F~-G-~~~~~~~y~-~~G~~~~~~L~~fi~~~~~~~ 134 (248)
T 2c0g_A 81 ENKALGDRYKVDDKNFPSIFLFK-G-NADEYVQLP-SHVDVTLDNLKAFVSANTPLY 134 (248)
T ss_dssp TTHHHHHHTTCCTTSCCEEEEES-S-SSSSEEECC-TTSCCCHHHHHHHHHHHSSCC
T ss_pred ccHHHHHHhCCCcCCCCeEEEEe-C-CcCcceeec-ccCCCCHHHHHHHHHHhhccc
Confidence 99999999999 999999999 6 211111221 137899999999999998844
No 87
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.53 E-value=2.7e-14 Score=127.84 Aligned_cols=104 Identities=10% Similarity=0.167 Sum_probs=86.0
Q ss_pred CeEEe-ChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 47 AVLRF-DGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 47 ~VI~L-~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
.|+++ +.++|++.+.+.+++..++|.|||+ ||++|+.+.|.++++|+.+. ++.|+++|++ ++++.++
T Consensus 100 ~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~----wC~~C~~l~p~l~~la~~~~-------~v~f~~vd~~-~~~l~~~ 167 (217)
T 2trc_P 100 FVYELETGEQFLETIEKEQKVTTIVVNIYED----GVRGCDALNSSLECLAAEYP-------MVKFCKIRAS-NTGAGDR 167 (217)
T ss_dssp SEEECCSHHHHHHHHHHSCTTCEEEEEEECT----TSTTHHHHHHHHHHHHTTCT-------TSEEEEEEHH-HHTCSTT
T ss_pred eEEEcCCHHHHHHHHHhcCCCcEEEEEEECC----CCccHHHHHHHHHHHHHHCC-------CeEEEEEECC-cHHHHHH
Confidence 48999 8899999986555557899999999 99999999999999998873 5999999999 8899999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecc-------cCHHHHHHHHHhh
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVG-------YSAEAIVKWIADR 168 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~-------~~a~~l~~fl~~~ 168 (328)
|+++++||+++|+.| + ......|. .+.++|.+||.+.
T Consensus 168 ~~i~~~PTl~~~~~G-~-----~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 168 FSSDVLPTLLVYKGG-E-----LISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp SCGGGCSEEEEEETT-E-----EEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEECC-E-----EEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 999999999999865 2 12221222 2359999999876
No 88
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.29 E-value=7.1e-16 Score=119.51 Aligned_cols=104 Identities=16% Similarity=0.268 Sum_probs=85.6
Q ss_pred CeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHc
Q psy8428 47 AVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (328)
Q Consensus 47 ~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l 126 (328)
+++++++++|++.+.++ +..++++|+++ ||++|+.+.|.++++++.+. +++.|+.+|+++++++++++
T Consensus 2 ~v~~l~~~~~~~~~~~~--~~~~~v~f~~~----~C~~C~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~~ 69 (106)
T 2yj7_A 2 SVIEVTDENFEQEVLKS--DKPVLVDFWAP----WCGPCRMIAPIIEELAKEYE------GKVKVVKVNVDENPNTAAQY 69 (106)
Confidence 37889999999876433 45689999999 99999999999999998875 36999999999999999999
Q ss_pred CCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhh
Q psy8428 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (328)
Q Consensus 127 ~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~ 168 (328)
+++++|++++|+.| +. .....|..+.+++.+|+++.
T Consensus 70 ~v~~~Pt~~~~~~g-~~-----~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 70 GIRSIPTLLLFKNG-QV-----VDRLVGAQPKEALKERIDKH 105 (106)
Confidence 99999999999654 22 22224666788899998764
No 89
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.52 E-value=8e-14 Score=132.60 Aligned_cols=109 Identities=13% Similarity=0.292 Sum_probs=89.9
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
++|..|++++|++.+.+. +..++|+|||+ ||++|+.+.|+++++|+.+.. .+++.|+++|.+++. +++
T Consensus 249 ~~v~~l~~~~f~~~~~~~--~k~~lv~f~a~----wC~~C~~~~p~~~~la~~~~~----~~~v~~~~vd~~~~~--~~~ 316 (361)
T 3uem_A 249 QPVKVLVGKNFEDVAFDE--KKNVFVEFYAP----WCGHCKQLAPIWDKLGETYKD----HENIVIAKMDSTANE--VEA 316 (361)
T ss_dssp SSSEEECTTTHHHHHTCT--TCEEEEEEECT----TCHHHHHHHHHHHHHHHHTTT----CSSEEEEEEETTTCB--CSS
T ss_pred CCcEEeecCchhhhcccC--CCcEEEEEecC----cCHhHHHHHHHHHHHHHHhcc----CCcEEEEEEECCccc--hhh
Confidence 458999999999998533 45799999999 999999999999999999863 236999999999987 689
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
++|+++||+++|+++++. .... ..|.++.++|.+||+++.+
T Consensus 317 ~~v~~~Pt~~~~~~~~~~---~~~~-~~G~~~~~~l~~~l~~~~~ 357 (361)
T 3uem_A 317 VKVHSFPTLKFFPASADR---TVID-YNGERTLDGFKKFLESGGQ 357 (361)
T ss_dssp CCCCSSSEEEEECSSSSC---CCEE-CCSCSSHHHHHHHHTTTSC
T ss_pred cCCcccCeEEEEECCCCc---ceeE-ecCCCCHHHHHHHHHhcCC
Confidence 999999999999876321 1122 2478999999999988754
No 90
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.52 E-value=1.6e-14 Score=115.54 Aligned_cols=103 Identities=15% Similarity=0.157 Sum_probs=80.5
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC----cCCh
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF----DEGS 120 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~----~~~~ 120 (328)
..++..++.++|++.+. . +..++|+|||+ ||++|+.+.|.++++++.+. .++.++.+|- ++++
T Consensus 11 ~~~~~~~~~~~~~~~~~-~--~~~~~v~f~a~----wC~~C~~~~p~l~~~~~~~~------~~v~~~~~~~~~~~~~~~ 77 (118)
T 1zma_A 11 IKDLEVTTVVRAQEALD-K--KETATFFIGRK----TCPYCRKFAGTLSGVVAETK------AHIYFINSEEPSQLNDLQ 77 (118)
T ss_dssp TTTSEECCHHHHHHHHH-T--TCCEEEEEECT----TCHHHHHHHHHHHHHHHHHC------CCCEEEETTCGGGHHHHH
T ss_pred HhhhhcCCHHHHHHHHh-C--CCeEEEEEECC----CCccHHHHHHHHHHHHHhcC------CeEEEEECCCcCcHHHHH
Confidence 35688999999999875 3 23689999999 99999999999999998764 3466653322 2346
Q ss_pred hhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHH
Q psy8428 121 DVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIA 166 (328)
Q Consensus 121 ~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~ 166 (328)
++.++++++++||+++|++| .......|..+.+++.+||+
T Consensus 78 ~~~~~~~i~~~Pt~~~~~~G------~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 78 AFRSRYGIPTVPGFVHITDG------QINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp HHHHHHTCCSSCEEEEEETT------EEEEECCTTCCHHHHHHHHT
T ss_pred HHHHHcCCCCCCeEEEEECC------EEEEEecCCCCHHHHHHHhh
Confidence 88999999999999999865 22333456788999999985
No 91
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.51 E-value=8.4e-14 Score=126.62 Aligned_cols=107 Identities=18% Similarity=0.280 Sum_probs=87.7
Q ss_pred hCCCeEEeChhhHHHHHHcCCCCccEEEEEee--CCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC---
Q psy8428 44 AKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTA--LAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE--- 118 (328)
Q Consensus 44 ~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA--~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~--- 118 (328)
..++|++||++||++.+. . +.+++|.||| + ||+ +.|+|+++|+.+.. .+++.|++||+++
T Consensus 3 ~~~~v~~Lt~~nF~~~i~-~--~~~vlV~FyA~~p----WCg----l~P~~e~lA~~~~~----~~~v~~akVDvd~~g~ 67 (240)
T 2qc7_A 3 HTKGALPLDTVTFYKVIP-K--SKFVLVKFDTQYP----YGE----KQDEFKRLAENSAS----SDDLLVAEVGISDYGD 67 (240)
T ss_dssp CCTTCEECCTTHHHHHGG-G--CSEEEEEECCSSC----CSH----HHHHHHHHHHHHTT----CTTEEEEEECCCCSSS
T ss_pred CCCCceECCHHHHHHHHc-C--CCCEEEEEeCCCC----CCc----chHHHHHHHHHhcC----CCCeEEEEEeCCcccc
Confidence 346799999999999763 3 3479999999 9 998 99999999998852 2469999999654
Q ss_pred --ChhhHHHcCCC--cCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 119 --GSDVFQMLRLN--TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 119 --~~~lf~~l~v~--svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
+++++++|+|+ ++||+++|++|. ......| .|+++.++|.+||++++
T Consensus 68 ~~~~~l~~~~~V~~~~~PTl~~f~~G~-~~~~~~y---~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 68 KLNMELSEKYKLDKESYPVFYLFRDGD-FENPVPY---TGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp CCSHHHHHHTTCCGGGCSEEEEEETTC-SSCCEEC---CSCSCHHHHHHHHHHTT
T ss_pred hhhHHHHHHcCCCCCCCCEEEEEeCCC-cCcceee---cCCCCHHHHHHHHHHhc
Confidence 89999999999 999999999863 1111222 47889999999999986
No 92
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.51 E-value=8.9e-14 Score=139.60 Aligned_cols=118 Identities=15% Similarity=0.183 Sum_probs=96.2
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC--Chhh
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE--GSDV 122 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~--~~~l 122 (328)
.++|++||+++|++.+.++ +..++|.|||+ ||++|+++.|+++++|+.+... ++.+.|+++|+++ ++++
T Consensus 11 ~~~V~~Lt~~~f~~~v~~~--~k~vlV~FyA~----WC~pCk~~~P~l~~la~~~~~~---~~~v~~~~VD~d~d~~~~l 81 (519)
T 3t58_A 11 SDPLTLLDADSVRPTVLGS--SSAWAVEFFAS----WCGHAIAFAPTWKELANDVKDW---RPALNLAVLDCAEETNSAV 81 (519)
T ss_dssp TSSSEEECTTTHHHHHSSC--SSEEEEEEECT----TSHHHHHHHHHHHHHHHHHGGG---TTTEEEEEEETTSGGGHHH
T ss_pred CCCcEECChHHHHHHHHhC--CCeEEEEEECC----CCHHHHHHHHHHHHHHHHhhCc---CCcEEEEEEECCccccHHH
Confidence 4579999999999987533 45799999999 9999999999999999998631 2369999999964 8999
Q ss_pred HHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCcc
Q psy8428 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (328)
Q Consensus 123 f~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~i 173 (328)
+++|+|+++||+++|++|++. +.......++.+.+++.++|.+.++.+-
T Consensus 82 ~~~~~V~~~PTl~~f~~g~~~--G~~~~~~~g~~~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 82 CREFNIAGFPTVRFFQAFTKN--GSGATLPGAGANVQTLRMRLIDALESHR 130 (519)
T ss_dssp HHHTTCCSBSEEEEECTTCCS--CCCEEECCSSCCHHHHHHHHHHHHTTCC
T ss_pred HHHcCCcccCEEEEEcCcccC--CCceeEecCCCCHHHHHHHHHHHHhhcc
Confidence 999999999999999986321 1223334577899999999999887543
No 93
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.49 E-value=1.2e-13 Score=125.83 Aligned_cols=119 Identities=8% Similarity=0.122 Sum_probs=92.2
Q ss_pred HHHHHHHhhhhC----CCeEEe-ChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCc
Q psy8428 34 DRVLHLSEMNAK----KAVLRF-DGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNK 108 (328)
Q Consensus 34 ~~~~~L~~l~~~----~~VI~L-~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~ 108 (328)
.+++++.+...+ ..|++| +.++|.+.+...+++..|+|.|||+ ||++|+.+.|.++++|+.|. .
T Consensus 96 ~Rl~el~~~~~~~~~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~----wC~~Ck~l~p~l~~La~~~~-------~ 164 (245)
T 1a0r_P 96 QCMQDMHQKLSFGPRYGFVYELESGEQFLETIEKEQKITTIVVHIYED----GIKGCDALNSSLICLAAEYP-------M 164 (245)
T ss_dssp HHHHHHHHHHCCCCCCCSEEECCSHHHHHHHHHSSCTTCEEEEEEECT----TSTTHHHHHHHHHHHHHHCT-------T
T ss_pred HHHHHHHHHhhccCCCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECC----CChHHHHHHHHHHHHHHHCC-------C
Confidence 455555543321 248999 7899999986444567899999999 99999999999999999874 4
Q ss_pred EEEEEEECcCChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeec-------ccCHHHHHHHHHhhcC
Q psy8428 109 LFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRV-------GYSAEAIVKWIADRTD 170 (328)
Q Consensus 109 v~F~~vD~~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~-------~~~a~~l~~fl~~~t~ 170 (328)
+.|+++|+++ +++.++|+++++||+++|+.| +. .+...| .++.++|..||.+..-
T Consensus 165 v~f~kVd~d~-~~l~~~~~I~~~PTll~~~~G-~~-----v~~~vG~~~~~g~~~~~e~Le~~L~~~g~ 226 (245)
T 1a0r_P 165 VKFCKIKASN-TGAGDRFSSDVLPTLLVYKGG-EL-----LSNFISVTEQLAEEFFTGDVESFLNEYGL 226 (245)
T ss_dssp SEEEEEEHHH-HCCTTSSCTTTCSEEEEEETT-EE-----EEEETTGGGGSCTTCCHHHHHHHHHTTTC
T ss_pred CEEEEEeCCc-HHHHHHCCCCCCCEEEEEECC-EE-----EEEEeCCcccccccccHHHHHHHHHHcCC
Confidence 9999999988 889999999999999999865 21 111111 2467899999988743
No 94
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.48 E-value=8.8e-14 Score=145.41 Aligned_cols=110 Identities=11% Similarity=0.119 Sum_probs=87.4
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
+.|++||++||++.+. . +..++|+|||+ ||++|+.+.|+|+++|+.+. +.+.|++||++++++++++
T Consensus 116 ~~v~~l~~~~f~~~i~-~--~~~~lv~Fya~----wC~~C~~~~p~~~~~a~~~~------~~v~~~~vd~~~~~~l~~~ 182 (780)
T 3apo_A 116 PEIITLERREFDAAVN-S--GELWFVNFYSP----GSSHSHDLAPTWREFAKEVD------GLLRIGAVNCGDDRMLCRM 182 (780)
T ss_dssp TTEEECCHHHHHHHHT-S--SSCEEEEEECS----SCHHHHHHHHHHHHHHHHTT------TTSEEEEEETTTCSSCC--
T ss_pred cceeeechHhHHhhhc-C--CCcEEEEEeCC----CCcchhHhhHHHHHHHHHhc------CceEEEEEeCCCcHHHHHH
Confidence 4699999999999983 3 45799999999 99999999999999999985 4599999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCcce
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQIR 174 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~i~ 174 (328)
++|+++||+++|++|.. .....|.+++++|.+|+.+.++..+.
T Consensus 183 ~~v~~~Pt~~~~~~g~~------~~~~~G~~~~~~l~~~l~~~~~~~~~ 225 (780)
T 3apo_A 183 KGVNSYPSLFIFRSGMA------AVKYNGDRSKESLVAFAMQHVRSTVT 225 (780)
T ss_dssp ------CEEEEECTTSC------CEECCSCSCHHHHHHHHHTTSCCCEE
T ss_pred cCCceeeeEEEEeCCcE------eeEecCCCCHHHHHHHHHHhchhhhe
Confidence 99999999999987621 12224788999999999999987654
No 95
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.48 E-value=3.2e-13 Score=141.12 Aligned_cols=134 Identities=13% Similarity=0.105 Sum_probs=109.6
Q ss_pred cCCchHHHHHHHHhhhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCC
Q psy8428 28 TSLSLGDRVLHLSEMNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSN 107 (328)
Q Consensus 28 ~~~~~~~~~~~L~~l~~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~ 107 (328)
.|....+.+.++.+....++|.+|++++|++++.+.+++..++|.|+|+ ||++|+++.|+|+++|+.+. +
T Consensus 525 ~g~~~~~~l~~fi~~~~~~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap----~C~~c~~~~p~~~~lA~~~~------~ 594 (780)
T 3apo_A 525 EGHHSAEQILEFIEDLRNPSVVSLTPSTFNELVKQRKHDEVWMVDFYSP----WSHPSQVLMPEWKRMARTLT------G 594 (780)
T ss_dssp CSCSCHHHHHHHHHHHHSCSEEECCHHHHHHHTTTCCTTCCEEEEEECT----TCHHHHHHHHHHHHHHHHHT------T
T ss_pred cCcccHHHHHHHHHhhcccceeecCcccHHHHhhccCCCCeEEEEEECC----CCHHHHHhhHHHHHHHHHhh------C
Confidence 3556667777777766678899999999999986555567789999999 99999999999999999986 4
Q ss_pred cEEEEEEECcCChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeec-ccCHHHHHHHHHhhcCCcc
Q psy8428 108 KLFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRV-GYSAEAIVKWIADRTDIQI 173 (328)
Q Consensus 108 ~v~F~~vD~~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~-~~~a~~l~~fl~~~t~~~i 173 (328)
++.|+++|+++++.++++++++++|++.+|++++... .....+ .| .++.++|.+|+.+.+...+
T Consensus 595 ~v~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~-~~~~~y-~g~~~~~~~l~~fi~~~~~~~v 659 (780)
T 3apo_A 595 LINVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKA-YQYHSY-NGWNRDAYSLRSWGLGFLPQAS 659 (780)
T ss_dssp TSEEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSC-CSCEEC-CCSCCSHHHHHHHHHTTSCCCS
T ss_pred CeEEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCc-cchhhc-CCCCCCHHHHHHHHhhhccccc
Confidence 6999999999999999999999999999999863211 111222 35 7899999999999875443
No 96
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.48 E-value=1.9e-13 Score=121.25 Aligned_cols=110 Identities=11% Similarity=0.028 Sum_probs=88.3
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
.++..+++++++++. +.. +..++|.|||+ ||++|+.+.|.++++|+.+... ..+++.|+++|+++++++.++
T Consensus 116 ~~~~~l~~~~~~~~~-~~~-~~~~~v~F~a~----wC~~C~~~~p~~~~l~~~~~~~--~~~~v~~~~vd~~~~~~l~~~ 187 (226)
T 1a8l_A 116 REETNLMDETKQAIR-NID-QDVRILVFVTP----TCPYCPLAVRMAHKFAIENTKA--GKGKILGDMVEAIEYPEWADQ 187 (226)
T ss_dssp HTCCCCCHHHHHHHT-TCC-SCEEEEEEECS----SCTTHHHHHHHHHHHHHHHHHT--TCCCEEEEEEEGGGCHHHHHH
T ss_pred CCCCCCCHHHHHHHH-hcC-CCcEEEEEeCC----CCCccHHHHHHHHHHHHhcccc--cCCcEEEEEEEcccCHHHHHh
Confidence 356789999999874 232 23348999999 9999999999999999987521 124699999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
|+|+++||+++|+.| +......|..+.+++.+||++.+
T Consensus 188 ~~v~~~Pt~~~~~~G------~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 188 YNVMAVPKIVIQVNG------EDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp TTCCSSCEEEEEETT------EEEEEEESCCCHHHHHHHHHHHH
T ss_pred CCCcccCeEEEEeCC------ceeEEEcCCCCHHHHHHHHHHhh
Confidence 999999999999865 12333457788999999998764
No 97
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.47 E-value=2.9e-13 Score=109.56 Aligned_cols=106 Identities=14% Similarity=0.201 Sum_probs=85.6
Q ss_pred eEEeChhhHHHHHHcCCCCccEEEEEeeC---CCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC-------c
Q psy8428 48 VLRFDGQKYKEYIKNGPRNYSAIVMFTAL---APQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF-------D 117 (328)
Q Consensus 48 VI~L~~~nf~~~v~~~~r~y~vvV~ftA~---~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~-------~ 117 (328)
+...+.++|++.+.+ .++..++|.|||+ +.+-||++|+.+.|.++++++.+. +++.|+++|+ +
T Consensus 7 v~~~~~~~~~~~~~~-~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~------~~~~~~~vd~~~~~~~~d 79 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQ-HNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHIS------EGCVFIYCQVGEKPYWKD 79 (123)
T ss_dssp EEEESHHHHHHHHHT-TTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCC------TTEEEEEEECCCHHHHHC
T ss_pred EEeccHHHHHHHHHH-hCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcC------CCcEEEEEECCCchhhhc
Confidence 566788999998863 2366899999998 456799999999999999998774 4699999999 7
Q ss_pred CChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHh
Q psy8428 118 EGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIAD 167 (328)
Q Consensus 118 ~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~ 167 (328)
+++++.++|+++++||+++|.+++ ...- ..+.+.+++.+|+++
T Consensus 80 ~~~~~~~~~~i~~~Pt~~~~~~~~------~~~g-~~~~~~~~l~~~i~~ 122 (123)
T 1wou_A 80 PNNDFRKNLKVTAVPTLLKYGTPQ------KLVE-SECLQANLVEMLFSE 122 (123)
T ss_dssp TTCHHHHHHCCCSSSEEEETTSSC------EEEG-GGGGCHHHHHHHHHC
T ss_pred hhHHHHHHCCCCeeCEEEEEcCCc------eEec-cccCCHHHHHHHHhc
Confidence 889999999999999999998742 1211 124678889999865
No 98
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.45 E-value=3.6e-13 Score=133.00 Aligned_cols=114 Identities=15% Similarity=0.220 Sum_probs=95.0
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
+++..++.++|++.+.+. +..++|.|||+ ||++|+.+.|.++++++.+.. .+++.|+++|.+++ ++.++
T Consensus 352 ~~v~~~~~~~~~~~~~~~--~k~vlv~f~a~----wC~~C~~~~p~~~~l~~~~~~----~~~v~~~~id~~~~-~~~~~ 420 (481)
T 3f8u_A 352 GPVKVVVAENFDEIVNNE--NKDVLIEFYAP----WCGHCKNLEPKYKELGEKLSK----DPNIVIAKMDATAN-DVPSP 420 (481)
T ss_dssp SSSEEECTTTHHHHHTCT--TCEEEEEEECT----TBHHHHHHHHHHHHHHHHTTT----CSSEEEEEEETTSS-CCCTT
T ss_pred CCeEEecccCHHHHhhcC--CCcEEEEEecC----cChhHHHhhHHHHHHHHHhcc----CCCEEEEEEECCch-hhHhh
Confidence 358899999999998532 45799999999 999999999999999998863 23699999999999 88999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCcce
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQIR 174 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~i~ 174 (328)
++++++||+++|++|++. .... ..|.++.+++.+||+++......
T Consensus 421 ~~v~~~Pt~~~~~~~~~~---~~~~-~~G~~~~~~l~~~l~~~~~~~~~ 465 (481)
T 3f8u_A 421 YEVRGFPTIYFSPANKKL---NPKK-YEGGRELSDFISYLQREATNPPV 465 (481)
T ss_dssp CCCCSSSEEEEECTTCTT---SCEE-CCSCCSHHHHHHHHHHHCSSCCC
T ss_pred CCCcccCEEEEEeCCCeE---eeeE-eCCCCCHHHHHHHHHHhcCCccc
Confidence 999999999999987532 1122 24778999999999999876654
No 99
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.45 E-value=2.8e-14 Score=115.35 Aligned_cols=109 Identities=17% Similarity=0.249 Sum_probs=87.8
Q ss_pred CCCeEEeC-hhhHHHHHHcC-CCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhh
Q psy8428 45 KKAVLRFD-GQKYKEYIKNG-PRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDV 122 (328)
Q Consensus 45 ~~~VI~L~-~~nf~~~v~~~-~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~l 122 (328)
...+++++ .++|++.+... .++..++|+||++ ||++|+.+.|.++++++.+. ++.|+.+|+++++++
T Consensus 13 ~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~----~C~~C~~~~~~l~~~~~~~~-------~v~~~~v~~~~~~~~ 81 (130)
T 1wmj_A 13 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTAS----WCGPCRFIAPVFAEYAKKFP-------GAVFLKVDVDELKEV 81 (130)
T ss_dssp CSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSS----SCSCSSSSHHHHHHHHHHCT-------TBCCEECCTTTSGGG
T ss_pred CcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECC----CChhHHHHHHHHHHHHHHCC-------CCEEEEEeccchHHH
Confidence 34688995 48999987531 1345689999999 99999999999999998873 599999999999999
Q ss_pred HHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCC
Q psy8428 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (328)
Q Consensus 123 f~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~ 171 (328)
.++|+++++|++++|+.| +. .....| .+.+++.++|++.++.
T Consensus 82 ~~~~~v~~~Pt~~~~~~g-~~-----~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 82 AEKYNVEAMPTFLFIKDG-AE-----ADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp HHHHTCCSSCCCCBCTTT-TC-----CBCCCT-TCTTTHHHHHHHHTSS
T ss_pred HHHcCCCccceEEEEeCC-eE-----EEEEeC-CCHHHHHHHHHHHHhc
Confidence 999999999999999655 22 122223 5788999999988764
No 100
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.44 E-value=2.7e-14 Score=141.12 Aligned_cols=92 Identities=14% Similarity=0.238 Sum_probs=77.9
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccC--CCCcEEEEEEECcCChhh
Q psy8428 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQM--YSNKLFFILVDFDEGSDV 122 (328)
Q Consensus 45 ~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~--~~~~v~F~~vD~~~~~~l 122 (328)
.+.|++||+++|++.+. ..++..++|.|||+ ||++|+++.|+++++|+.+....+ ..+++.|++||+++++++
T Consensus 22 ~~~V~~Lt~~~F~~~l~-~~~~k~VlV~FyA~----WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~l 96 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHR-VAPLCPWIVLFYND----GCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDL 96 (470)
T ss_dssp CTTEEECSCSCGGGTCT-TGGGSCEEEEEECT----TCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHH
T ss_pred CCCcEECCHHHHHHHHH-hCCCCeEEEEEECC----CCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHH
Confidence 46799999999999874 33445799999999 999999999999999998853211 013699999999999999
Q ss_pred HHHcCCCcCceEEEecCCC
Q psy8428 123 FQMLRLNTAPIFMHFPAKG 141 (328)
Q Consensus 123 f~~l~v~svP~l~~f~p~g 141 (328)
+++|+|+++||+++|.+++
T Consensus 97 a~~y~V~~~PTlilf~~gg 115 (470)
T 3qcp_A 97 CRKYDINFVPRLFFFYPRD 115 (470)
T ss_dssp HHHTTCCSSCEEEEEEESS
T ss_pred HHHcCCCccCeEEEEECCC
Confidence 9999999999999998764
No 101
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.44 E-value=1.8e-13 Score=110.80 Aligned_cols=110 Identities=15% Similarity=0.233 Sum_probs=86.6
Q ss_pred eEEeChhhHHHHHHcC-CCCccEEEEEeeCCCCCCCccchhhHHHH---HHHHHHcccccCCCCcEEEEEEECc--CChh
Q psy8428 48 VLRFDGQKYKEYIKNG-PRNYSAIVMFTALAPQRNCHICVSASDEY---TIVANSFRYSQMYSNKLFFILVDFD--EGSD 121 (328)
Q Consensus 48 VI~L~~~nf~~~v~~~-~r~y~vvV~ftA~~~~~~C~~C~~~~pef---~~vA~s~~~~~~~~~~v~F~~vD~~--~~~~ 121 (328)
.+++++++|++.+... .++..++|.|||+ ||++|+.+.|++ +.+++.+. +++.++.+|++ ++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~----wC~~C~~~~~~~~~~~~~~~~~~------~~~~~~~vd~~~~~~~~ 77 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTT----WCGPCKRLSKVVFKDSLVADYFN------RHFVNLKMDMEKGEGVE 77 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCT----TCTHHHHHHHHGGGCHHHHHHHH------HHSEEEEECSSSTTHHH
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECC----CCccHHHHHHHhcCcHHHHHHHh------cCeEEEEEecCCcchHH
Confidence 4678889998877311 1234699999999 999999999999 77877654 35889999998 4789
Q ss_pred hHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc
Q psy8428 122 VFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 122 lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~ 172 (328)
+.++|+++++|++++|.++|+ ......|..+.+++.++|++.++.+
T Consensus 78 ~~~~~~v~~~Pt~~~~d~~G~-----~~~~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 78 LRKKYGVHAYPTLLFINSSGE-----VVYRLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp HHHHTTCCSSCEEEEECTTSC-----EEEEEESCCCHHHHHHHHHHHHSCC
T ss_pred HHHHcCCCCCCEEEEECCCCc-----EEEEecCCCCHHHHHHHHHHHHHhc
Confidence 999999999999999965443 2333357778999999999887643
No 102
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.44 E-value=3.8e-13 Score=107.93 Aligned_cols=100 Identities=10% Similarity=0.167 Sum_probs=80.9
Q ss_pred CCeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChh---
Q psy8428 46 KAVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD--- 121 (328)
Q Consensus 46 ~~VI~L~~-~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~--- 121 (328)
++.++|++ +.|++++.+ +.+++|+|+|+ ||++|+.+.|+|+++++. +++.|.++|++++++
T Consensus 6 ~~~~~i~s~e~f~~ii~~---~~~vvi~khat----wCgpc~~~~~~~e~~~~~--------~~v~~~~vdVde~r~~Sn 70 (112)
T 3iv4_A 6 GVAIKLSSIDQFEQVIEE---NKYVFVLKHSE----TCPISANAYDQFNKFLYE--------RDMDGYYLIVQQERDLSD 70 (112)
T ss_dssp GCEEECCSHHHHHHHHHH---CSEEEEEEECT----TCHHHHHHHHHHHHHHHH--------HTCCEEEEEGGGGHHHHH
T ss_pred cceeecCCHHHHHHHHhc---CCCEEEEEECC----cCHhHHHHHHHHHHHhcc--------CCceEEEEEeecCchhhH
Confidence 55778855 689998753 55799999999 999999999999999973 259999999999876
Q ss_pred -hHHHcCCCc-CceEEEecCCCCCCCCCceeeeecccCHHHHHHHH
Q psy8428 122 -VFQMLRLNT-APIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWI 165 (328)
Q Consensus 122 -lf~~l~v~s-vP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl 165 (328)
+++++||++ .|++++|++|. ..++...+..+.++|.+.+
T Consensus 71 ~IA~~~~V~h~sPq~il~k~G~-----~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 71 YIAKKTNVKHESPQAFYFVNGE-----MVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp HHHHHHTCCCCSSEEEEEETTE-----EEEEEEGGGCSHHHHHHHT
T ss_pred HHHHHhCCccCCCeEEEEECCE-----EEEEeeccccCHHHHHHhh
Confidence 899999996 99999999872 2344344567888887654
No 103
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.42 E-value=4.5e-13 Score=100.08 Aligned_cols=81 Identities=19% Similarity=0.152 Sum_probs=70.0
Q ss_pred EEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcCCCcCceEEEecCCCCCCCCCc
Q psy8428 69 AIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDT 148 (328)
Q Consensus 69 vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~ 148 (328)
.++.|||+ ||++|+.+.|.++++++.+. +++.|..+|+++++++.+++|++++|++++ .| + .
T Consensus 4 ~vv~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G-~-----~ 65 (85)
T 1nho_A 4 NIEVFTSP----TCPYCPMAIEVVDEAKKEFG------DKIDVEKIDIMVDREKAIEYGLMAVPAIAI--NG-V-----V 65 (85)
T ss_dssp CEEEESCS----SSCCSTTHHHHHHHHHHHHC------SSCCEEEECTTTCGGGGGGTCSSCSSEEEE--TT-T-----E
T ss_pred EEEEEECC----CCcchHHHHHHHHHHHHHhc------CCeEEEEEECCCCHHHHHhCCceeeCEEEE--CC-E-----E
Confidence 57899999 99999999999999999885 469999999999999999999999999998 43 1 1
Q ss_pred eeeeecccCHHHHHHHHHhhc
Q psy8428 149 LDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 149 ~~~~~~~~~a~~l~~fl~~~t 169 (328)
...|..+.+++.+++++.+
T Consensus 66 --~~~G~~~~~~l~~~l~~~l 84 (85)
T 1nho_A 66 --RFVGAPSREELFEAINDEM 84 (85)
T ss_dssp --EEECSSCCHHHHHHHHHHC
T ss_pred --EEccCCCHHHHHHHHHHHh
Confidence 2246668899999998865
No 104
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.41 E-value=6.1e-13 Score=99.36 Aligned_cols=82 Identities=20% Similarity=0.184 Sum_probs=70.0
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcCCCcCceEEEecCCCCCCCCC
Q psy8428 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSD 147 (328)
Q Consensus 68 ~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~ 147 (328)
..++.||++ ||++|+++.|.++++++.+. +++.|..+|+++++++.+++|++++|++++ .| +
T Consensus 4 ~~vv~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G-~----- 65 (85)
T 1fo5_A 4 VKIELFTSP----MCPHCPAAKRVVEEVANEMP------DAVEVEYINVMENPQKAMEYGIMAVPTIVI--NG-D----- 65 (85)
T ss_dssp EEEEEEECC----CSSCCCTHHHHHHHHHHHCS------SSEEEEEEESSSSCCTTTSTTTCCSSEEEE--TT-E-----
T ss_pred eEEEEEeCC----CCCchHHHHHHHHHHHHHcC------CceEEEEEECCCCHHHHHHCCCcccCEEEE--CC-E-----
Confidence 468999999 99999999999999999874 469999999999999999999999999998 43 1
Q ss_pred ceeeeecccCHHHHHHHHHhhc
Q psy8428 148 TLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 148 ~~~~~~~~~~a~~l~~fl~~~t 169 (328)
. ...|..+.+++.+++++.+
T Consensus 66 ~--~~~G~~~~~~l~~~l~~~l 85 (85)
T 1fo5_A 66 V--EFIGAPTKEALVEAIKKRL 85 (85)
T ss_dssp E--ECCSSSSSHHHHHHHHHHC
T ss_pred E--eeecCCCHHHHHHHHHHhC
Confidence 1 2235568899999998753
No 105
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.39 E-value=7.6e-13 Score=108.53 Aligned_cols=110 Identities=11% Similarity=0.168 Sum_probs=82.7
Q ss_pred CeEEeC-hhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHH---HHHHHHcccccCCCCcEEEEEEEC----cC
Q psy8428 47 AVLRFD-GQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEY---TIVANSFRYSQMYSNKLFFILVDF----DE 118 (328)
Q Consensus 47 ~VI~L~-~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef---~~vA~s~~~~~~~~~~v~F~~vD~----~~ 118 (328)
....++ .++|+..+.+ .++..++|.|||+ ||++|+.+.|.+ +++++.+. ++.|+.+|+ ++
T Consensus 12 ~f~~~~~~~~~~~~l~~-~~~k~vlv~F~a~----wC~~C~~~~~~~~~~~~l~~~~~-------~~~~~~vd~~~~~~~ 79 (134)
T 2fwh_A 12 NFTQIKTVDELNQALVE-AKGKPVMLDLYAD----WCVACKEFEKYTFSDPQVQKALA-------DTVLLQANVTANDAQ 79 (134)
T ss_dssp CCEECCSHHHHHHHHHH-HTTSCEEEEEECT----TCHHHHHHHHHTTTSHHHHHHTT-------TSEEEEEECTTCCHH
T ss_pred CcEEecCHHHHHHHHHH-hcCCcEEEEEECC----CCHHHHHHHHHhcCCHHHHHHhc-------CcEEEEEeCCCCcch
Confidence 345454 4677777642 2355799999999 999999999999 99998873 499999999 55
Q ss_pred ChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCC
Q psy8428 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (328)
Q Consensus 119 ~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~ 171 (328)
++++.++|+++++|++++|.++|+.. ......|..+.++|.+++++..+.
T Consensus 80 ~~~l~~~~~v~~~Pt~~~~d~~G~~v---~~~~~~G~~~~~~l~~~l~~~~~~ 129 (134)
T 2fwh_A 80 DVALLKHLNVLGLPTILFFDGQGQEH---PQARVTGFMDAETFSAHLRDRQPH 129 (134)
T ss_dssp HHHHHHHTTCCSSSEEEEECTTSCBC---GGGCBCSCCCHHHHHHHHHHC---
T ss_pred HHHHHHHcCCCCCCEEEEECCCCCEe---eeeeeeeccCHHHHHHHHHhcCcc
Confidence 78999999999999999995544321 002234678899999999887654
No 106
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.39 E-value=1.3e-12 Score=129.95 Aligned_cols=113 Identities=15% Similarity=0.337 Sum_probs=91.0
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
+.|.+|+++||++.+.+. +.+++|.|||+ ||++|+.+.|.++++|+.+... ..++.|+++|.+++... +
T Consensus 358 ~~v~~l~~~~f~~~v~~~--~k~vlv~F~a~----wC~~C~~~~p~~~~l~~~~~~~---~~~v~~~~vd~~~~~~~-~- 426 (504)
T 2b5e_A 358 SSVFQLVGKNHDEIVNDP--KKDVLVLYYAP----WCGHCKRLAPTYQELADTYANA---TSDVLIAKLDHTENDVR-G- 426 (504)
T ss_dssp CSEEEECTTTHHHHHHCT--TCCEEEEEECT----TCHHHHHHHHHHHHHHHHHHHH---CSSCEEEEEEGGGCCCS-S-
T ss_pred ccceecccccHHHhhccC--CCCEEEEEECC----CChhHHHHhHHHHHHHHHhhcc---CCcEEEEEecCCccccc-c-
Confidence 459999999999998643 45699999999 9999999999999999988521 24699999999988754 4
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCcc
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~i 173 (328)
++|+++||+++|+.|.. .+...+ .|.++.+++.+||+++.+..+
T Consensus 427 ~~v~~~Pt~~~~~~G~~-~~~~~~---~G~~~~~~l~~~i~~~~~~~~ 470 (504)
T 2b5e_A 427 VVIEGYPTIVLYPGGKK-SESVVY---QGSRSLDSLFDFIKENGHFDV 470 (504)
T ss_dssp CCCSSSSEEEEECCTTS-CCCCBC---CSCCCHHHHHHHHHHHCTTCC
T ss_pred CCceecCeEEEEeCCce-ecceEe---cCCCCHHHHHHHHHhcCCCCC
Confidence 99999999999976632 111222 477899999999999877554
No 107
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.38 E-value=2.8e-12 Score=114.06 Aligned_cols=103 Identities=14% Similarity=0.089 Sum_probs=85.3
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
.++.++++++|++++. . ++..+++.|||+ ||++|+.+.|.++++|+.+ +++.|+.+|++++++++++
T Consensus 118 ~~~~~l~~~~~~~~~~-~-~~~~~~v~F~a~----wC~~C~~~~~~~~~~~~~~-------~~v~~~~vd~~~~~~l~~~ 184 (229)
T 2ywm_A 118 QRKPQLSEKTLELLQV-V-DIPIEIWVFVTT----SCGYCPSAAVMAWDFALAN-------DYITSKVIDASENQDLAEQ 184 (229)
T ss_dssp TTCCSCCHHHHHHHTT-C-CSCEEEEEEECT----TCTTHHHHHHHHHHHHHHC-------TTEEEEEEEGGGCHHHHHH
T ss_pred CCccCCCHHHHHHHHh-c-CCCeEEEEEECC----CCcchHHHHHHHHHHHHHC-------CCeEEEEEECCCCHHHHHH
Confidence 5678999999998762 3 233347889999 9999999999999999887 2699999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
|+|+++|++++ .| + .....|..+.+++.+|+++.++
T Consensus 185 ~~v~~~Pt~~~--~G-~------~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 185 FQVVGVPKIVI--NK-G------VAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp TTCCSSSEEEE--GG-G------TEEEESCCCHHHHHHHHHHHHH
T ss_pred cCCcccCEEEE--CC-E------EEEeeCCCCHHHHHHHHHHHhh
Confidence 99999999998 43 2 2223577889999999988764
No 108
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.34 E-value=8.6e-12 Score=118.50 Aligned_cols=127 Identities=17% Similarity=0.275 Sum_probs=103.4
Q ss_pred CCchHHHHHHHHhhhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCc
Q psy8428 29 SLSLGDRVLHLSEMNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNK 108 (328)
Q Consensus 29 ~~~~~~~~~~L~~l~~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~ 108 (328)
|+...+.+.++.+......|.++|++|+++... .+ ...++++|+++ ||++|+++.|+|+++|+.+. ++
T Consensus 100 g~~~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~-~~-~~~~~v~F~~~----~~~~~~~~~~~~~~~A~~~~------~~ 167 (361)
T 3uem_A 100 GEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFG-GE-IKTHILLFLPK----SVSDYDGKLSNFKTAAESFK------GK 167 (361)
T ss_dssp SCCCHHHHHHHHHHHSSCSEEECSTTTHHHHHS-CS-CCEEEEEECCS----SSSSHHHHHHHHHHHHGGGT------TT
T ss_pred CcCCHHHHHHHHHHcCCCcceecCcccHHHHhc-CC-CCcEEEEEEeC----CchhHHHHHHHHHHHHHHcc------Cc
Confidence 445567777777766667799999999999874 32 23578899999 99999999999999999986 56
Q ss_pred EEEEEEECc--CChhhHHHcCCCc--CceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 109 LFFILVDFD--EGSDVFQMLRLNT--APIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 109 v~F~~vD~~--~~~~lf~~l~v~s--vP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
+.|+.+|++ ++++++++|||++ +|++.++..++. ...|....+..+++++.+|+.+.++
T Consensus 168 i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~---~~ky~~~~~~~~~~~l~~fi~~~l~ 230 (361)
T 3uem_A 168 ILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEE---MTKYKPESEELTAERITEFCHRFLE 230 (361)
T ss_dssp CEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC-----CCEECCSSCCCCHHHHHHHHHHHHT
T ss_pred eEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCCc---ccccCCCccccCHHHHHHHHHHHhc
Confidence 999999999 6899999999998 999999998632 2345443467899999999999775
No 109
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.33 E-value=3.5e-12 Score=103.83 Aligned_cols=89 Identities=16% Similarity=0.204 Sum_probs=73.0
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHH--HHHHHcccccCCCCcEEEEEEEC---cCChhhHHHcCC---CcCceEEEe
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYT--IVANSFRYSQMYSNKLFFILVDF---DEGSDVFQMLRL---NTAPIFMHF 137 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~--~vA~s~~~~~~~~~~v~F~~vD~---~~~~~lf~~l~v---~svP~l~~f 137 (328)
+..++|.|||+ ||++|+.+.|.++ ++++.+. +++.|+.+|+ ++++++.++|++ +++|++++|
T Consensus 29 ~k~vlv~f~a~----wC~~C~~~~~~l~~~~~~~~~~------~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~ 98 (133)
T 3fk8_A 29 HKPTLLVFGAN----WCTDCRALDKSLRNQKNTALIA------KHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVV 98 (133)
T ss_dssp TCCEEEEEECT----TCHHHHHHHHHHTSHHHHHHHH------HHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEE
T ss_pred CCcEEEEEcCC----CCHHHHHHHHHhCCHHHHHHhc------CCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEE
Confidence 34699999999 9999999999999 9998875 3699999999 889999999999 999999999
Q ss_pred cCCCCCCCCCceeeeec-------ccCHHHHHHHHHhhc
Q psy8428 138 PAKGKPKPSDTLDIQRV-------GYSAEAIVKWIADRT 169 (328)
Q Consensus 138 ~p~g~~~~~~~~~~~~~-------~~~a~~l~~fl~~~t 169 (328)
.+.|+. .....+ ..+.+++.+|+++.+
T Consensus 99 d~~G~~-----~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 99 NSDGKV-----RYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp CTTSCE-----EEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred CCCCCE-----EEEecCCcccccccCCHHHHHHHHHHhc
Confidence 544432 222123 457899999998753
No 110
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.28 E-value=4e-12 Score=108.27 Aligned_cols=107 Identities=14% Similarity=0.225 Sum_probs=81.1
Q ss_pred eEEeChhhHHHHHH-cCCCCccEEEEEeeCCCCCCCccchhhHHHH---HHHHHHcccccCCCCcEEEEEEECcCChhh-
Q psy8428 48 VLRFDGQKYKEYIK-NGPRNYSAIVMFTALAPQRNCHICVSASDEY---TIVANSFRYSQMYSNKLFFILVDFDEGSDV- 122 (328)
Q Consensus 48 VI~L~~~nf~~~v~-~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef---~~vA~s~~~~~~~~~~v~F~~vD~~~~~~l- 122 (328)
....+.++|++.+. ...++..++|.|||+ ||++|+.+++++ .++++.+. +++.|+.+|+++++++
T Consensus 28 ~~~~~~~~~~~~~~~a~~~gk~vlv~F~A~----WC~~C~~~~~~~~~~~~~~~~~~------~~~~~v~v~~d~~~~~~ 97 (172)
T 3f9u_A 28 EVHAKFDDYDLGMEYARQHNKPVMLDFTGY----GCVNCRKMELAVWTDPKVSSIIN------NDYVLITLYVDNKTPLT 97 (172)
T ss_dssp CCCCCBSCHHHHHHHHHHTTCCEEEEEECT----TCHHHHHHHHHTTTSHHHHHHHH------HHCEEEEEETTCCCEEE
T ss_pred ccccchhhHHHHHHHHHHcCCeEEEEEECC----CCHHHHHHHHHhcCCHHHHHHhc------CCEEEEEEecCcccccc
Confidence 34566778887763 112355799999999 999999997776 77776664 3699999999987766
Q ss_pred -------------------------HHHcCCCcCceEEEecCCCCCCCCCceeeeecccC-HHHHHHHHHhhc
Q psy8428 123 -------------------------FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYS-AEAIVKWIADRT 169 (328)
Q Consensus 123 -------------------------f~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~-a~~l~~fl~~~t 169 (328)
.++|+++++||++++.+.|+. .....|..+ .+++.++|++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~-----~~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 98 EPVKIMENGTERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNP-----LNKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp EEEEEEETTEEEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCB-----SSCCBCSCCCHHHHHHHHHHHH
T ss_pred hhhhhhhcchhhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCE-----EeeccCCCCCHHHHHHHHHHHH
Confidence 789999999999999665543 222236666 999999998765
No 111
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.27 E-value=5.4e-11 Score=107.82 Aligned_cols=111 Identities=11% Similarity=0.020 Sum_probs=86.6
Q ss_pred eEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcC
Q psy8428 48 VLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR 127 (328)
Q Consensus 48 VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~ 127 (328)
-..+++++++.+. +. ++..+++.|||+ ||++|+.+.|.++++|+.+... .++++.+.++|+++++++.++|+
T Consensus 122 ~~~l~~~~~~~~~-~~-~~~~~vv~F~a~----wC~~C~~~~p~l~~la~~~~~~--~~~~v~~~~vd~~~~~~~~~~~~ 193 (243)
T 2hls_A 122 ESGLEDATKEALK-SL-KGRVHIETIITP----SCPYCPYAVLLAHMFAYEAWKQ--GNPVILSEAVEAYENPDIADKYG 193 (243)
T ss_dssp CCCCCHHHHHHHH-HC-CSCEEEEEEECS----SCSSHHHHHHHHHHHHHHHHHT--TCCCEEEEEEETTTCHHHHHHTT
T ss_pred CCCCCHHHHHHHH-Hc-CCCcEEEEEECC----CCCCcHHHHHHHHHHHHHcccc--cCCcEEEEEEECccCHHHHHHcC
Confidence 3467888777653 22 233568889999 9999999999999999987310 11369999999999999999999
Q ss_pred CCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCcceee
Q psy8428 128 LNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQIRVF 176 (328)
Q Consensus 128 v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~i~i~ 176 (328)
|+++||+++ .| + .. ..|..+.+++.++|.+.++.+..+.
T Consensus 194 V~~vPt~~i--~G-~------~~-~~G~~~~~~l~~~l~~~~~~~~~~~ 232 (243)
T 2hls_A 194 VMSVPSIAI--NG-Y------LV-FVGVPYEEDFLDYVKSAAEGRLTVK 232 (243)
T ss_dssp CCSSSEEEE--TT-E------EE-EESCCCHHHHHHHHHHHHTTCCCCC
T ss_pred CeeeCeEEE--CC-E------EE-EeCCCCHHHHHHHHHHHhhcccccC
Confidence 999999988 33 1 11 3577889999999999988765443
No 112
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.21 E-value=1.4e-11 Score=99.65 Aligned_cols=90 Identities=10% Similarity=0.095 Sum_probs=68.6
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC--hhhHHHcCCCcCceEEEecCCCCCC
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG--SDVFQMLRLNTAPIFMHFPAKGKPK 144 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~--~~lf~~l~v~svP~l~~f~p~g~~~ 144 (328)
..++|+|||+ ||++|++++|+ ++..|.... ....+.+.++|++++ +++..+++|+++||+++|..|
T Consensus 19 ~~~LV~F~A~----wC~~Ck~~~~~---i~~~~~~~a-~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G---- 86 (116)
T 3dml_A 19 ELRLLMFEQP----GCLYCARWDAE---IAPQYPLTD-EGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGD---- 86 (116)
T ss_dssp CEEEEEEECT----TCHHHHHHHHH---TTTTGGGSH-HHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETT----
T ss_pred CCEEEEEECC----CCHHHHHHHHH---HHhhHHHhh-hcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECC----
Confidence 3589999999 99999999974 443443110 001367888999885 589999999999999999965
Q ss_pred CCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 145 PSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 145 ~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
++..+..|..++++|.+||++.++
T Consensus 87 --~ev~Ri~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 87 --VESGRLEGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp --EEEEEEECCCCHHHHHHHHHHHHH
T ss_pred --EEEeeecCCCCHHHHHHHHHHHHh
Confidence 345566788899999999987653
No 113
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.19 E-value=1.7e-11 Score=105.26 Aligned_cols=81 Identities=5% Similarity=0.016 Sum_probs=68.4
Q ss_pred eEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcC
Q psy8428 48 VLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR 127 (328)
Q Consensus 48 VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~ 127 (328)
.++++++.++.+. .-++..++|.|||+ ||++|+...|.++++++.+. ++.|..+|.|+++++.++|+
T Consensus 38 ~~~~~~~~~~~l~--~~~~k~vvv~F~A~----WC~pC~~~~P~l~~l~~~~~-------~v~~~~v~~d~~~~~~~~~~ 104 (167)
T 1z6n_A 38 SNGLPSALTERLQ--RIERRYRLLVAGEM----WCPDCQINLAALDFAQRLQP-------NIELAIISKGRAEDDLRQRL 104 (167)
T ss_dssp HHCCCHHHHHHHH--TCCSCEEEEEECCT----TCHHHHHHHHHHHHHHHHCT-------TEEEEEECHHHHHHHTTTTT
T ss_pred ccCCCHHHHHHHH--HhCCCEEEEEEECC----CChhHHHHHHHHHHHHHHCC-------CcEEEEEECCCCHHHHHHHH
Confidence 4678888776653 22345688999999 99999999999999998762 59999999999999999897
Q ss_pred ---CCcCceEEEecCCC
Q psy8428 128 ---LNTAPIFMHFPAKG 141 (328)
Q Consensus 128 ---v~svP~l~~f~p~g 141 (328)
++++||+++|.++|
T Consensus 105 ~~~v~~iPt~i~~~~~G 121 (167)
T 1z6n_A 105 ALERIAIPLVLVLDEEF 121 (167)
T ss_dssp TCSSCCSSEEEEECTTC
T ss_pred HcCCCCcCeEEEECCCC
Confidence 99999999999864
No 114
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.19 E-value=7.2e-11 Score=104.89 Aligned_cols=80 Identities=9% Similarity=-0.037 Sum_probs=65.9
Q ss_pred CCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHH
Q psy8428 81 NCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEA 160 (328)
Q Consensus 81 ~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~ 160 (328)
||++|+.+.|+++++|+.+.+ ++++.|+++|++++++++++|||+++||+++|+.+ +. . ..+ .|..+.++
T Consensus 36 ~C~~c~~~~~~~~~~a~~~~~----~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~~~-~~--~--~~~-~G~~~~~~ 105 (229)
T 2ywm_A 36 SCQTAEELLKETVEVIGEAVG----QDKIKLDIYSPFTHKEETEKYGVDRVPTIVIEGDK-DY--G--IRY-IGLPAGLE 105 (229)
T ss_dssp GGGHHHHHHHHHHHHHHHHHC----TTTEEEEEECTTTCHHHHHHTTCCBSSEEEEESSS-CC--C--EEE-ESCCCTTH
T ss_pred ccHHHHHHHHHHHHHHhccCC----CCceEEEEecCcccHHHHHHcCCCcCcEEEEECCC-cc--c--cee-cCCccHHH
Confidence 999999999999999988852 25799999999999999999999999999999743 11 1 222 46678888
Q ss_pred HHHHHHhhcC
Q psy8428 161 IVKWIADRTD 170 (328)
Q Consensus 161 l~~fl~~~t~ 170 (328)
+.+|+.+.++
T Consensus 106 l~~~~~~~~~ 115 (229)
T 2ywm_A 106 FTTLINGIFH 115 (229)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999887643
No 115
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.19 E-value=4.8e-11 Score=100.26 Aligned_cols=89 Identities=18% Similarity=0.226 Sum_probs=71.6
Q ss_pred CccEEEEEe-eCCCCCCCccchhhHHHH---HHHHHHcccccCCCCcEEEEEEECcCCh-----------hhHHHcCCCc
Q psy8428 66 NYSAIVMFT-ALAPQRNCHICVSASDEY---TIVANSFRYSQMYSNKLFFILVDFDEGS-----------DVFQMLRLNT 130 (328)
Q Consensus 66 ~y~vvV~ft-A~~~~~~C~~C~~~~pef---~~vA~s~~~~~~~~~~v~F~~vD~~~~~-----------~lf~~l~v~s 130 (328)
+..++|.|| |+ ||++|+.+.|++ +++++... +++.++.+|.++.+ ++.++|++++
T Consensus 47 gk~vlv~F~ga~----wC~~C~~~~p~l~~~~~~~~~~~------~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~ 116 (154)
T 2ju5_A 47 HKPIGLFFTGSD----WCMWCIKMQDQILQSSEFKHFAG------VHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTG 116 (154)
T ss_dssp CCCEEEEEECTT----TCHHHHHHHHHTTTSHHHHHHHH------HHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCS
T ss_pred CCeEEEEEeCCC----CCHhHHHHHHHHhcCHHHHHHhc------CcEEEEEecCccccCCChhhHhhHHHHHHHcCCCC
Confidence 446999999 99 999999999999 77766543 36999999998754 8999999999
Q ss_pred CceEEEecCCCCCCCCCceeeeeccc--CHHHHHHHHHhhcC
Q psy8428 131 APIFMHFPAKGKPKPSDTLDIQRVGY--SAEAIVKWIADRTD 170 (328)
Q Consensus 131 vP~l~~f~p~g~~~~~~~~~~~~~~~--~a~~l~~fl~~~t~ 170 (328)
+|+++++.++|+ ..... |.. +.+++.++|++.++
T Consensus 117 ~Pt~~~~d~~G~-----~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 117 FPELVFIDAEGK-----QLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp SSEEEEECTTCC-----EEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCC-----EEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 999999965543 23333 545 78999999988765
No 116
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.80 E-value=2.4e-12 Score=104.28 Aligned_cols=94 Identities=16% Similarity=0.216 Sum_probs=74.7
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHH---HHHHHHcccccCCCCcEEEEEEECc--CChhhHHHcCCCcCceEEEecCC
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEY---TIVANSFRYSQMYSNKLFFILVDFD--EGSDVFQMLRLNTAPIFMHFPAK 140 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef---~~vA~s~~~~~~~~~~v~F~~vD~~--~~~~lf~~l~v~svP~l~~f~p~ 140 (328)
+..++|+|||+ ||++|+.+.|.+ +++++.+. +++.|+.+|++ +++++.++|+++++|++++|.+.
T Consensus 19 ~k~vlv~f~a~----wC~~C~~~~~~~~~~~~~~~~~~------~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~ 88 (130)
T 2lst_A 19 GRMVMVYFHSE----HCPYCQQMNTFVLSDPGVSRLLE------ARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPK 88 (130)
Confidence 45689999999 999999999999 89987664 46899999995 57899999999999999999653
Q ss_pred -CCCCCCCceeeeecccCHHHHHHHHHhhcCCc
Q psy8428 141 -GKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 141 -g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~ 172 (328)
|+.. ......|..+.+++.++|++.++..
T Consensus 89 ~G~~~---~~~~~~G~~~~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 89 AGAWE---EVGRLFGSRPRAEFLKELRQVCVKG 118 (130)
Confidence 3220 0222246678899999999887754
No 117
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.17 E-value=8.3e-11 Score=86.24 Aligned_cols=73 Identities=14% Similarity=0.072 Sum_probs=60.5
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcCCCcCceEEEecCCCCCCCCCce
Q psy8428 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTL 149 (328)
Q Consensus 70 vV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~ 149 (328)
.|.|||+ ||++|+.+.|.++++++.+. +++.+.++| ++++.++||++++|++++ +| + ..
T Consensus 3 ~v~f~a~----wC~~C~~~~~~l~~~~~~~~------~~~~~~~v~---~~~~~~~~~v~~~Pt~~~--~G-~-----~~ 61 (77)
T 1ilo_A 3 KIQIYGT----GCANCQMLEKNAREAVKELG------IDAEFEKIK---EMDQILEAGLTALPGLAV--DG-E-----LK 61 (77)
T ss_dssp EEEEECS----SSSTTHHHHHHHHHHHHHTT------CCEEEEEEC---SHHHHHHHTCSSSSCEEE--TT-E-----EE
T ss_pred EEEEEcC----CChhHHHHHHHHHHHHHHcC------CceEEEEec---CHHHHHHCCCCcCCEEEE--CC-E-----EE
Confidence 4789999 99999999999999999874 468999998 889999999999999998 43 1 22
Q ss_pred eeeeccc-CHHHHHHHH
Q psy8428 150 DIQRVGY-SAEAIVKWI 165 (328)
Q Consensus 150 ~~~~~~~-~a~~l~~fl 165 (328)
.. |.. +.+++.+|+
T Consensus 62 ~~--G~~~~~~~l~~~l 76 (77)
T 1ilo_A 62 IM--GRVASKEEIKKIL 76 (77)
T ss_dssp EC--SSCCCHHHHHHHC
T ss_pred Ec--CCCCCHHHHHHHh
Confidence 21 555 788888876
No 118
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.17 E-value=4.1e-11 Score=91.95 Aligned_cols=75 Identities=17% Similarity=0.411 Sum_probs=61.6
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcCCCcCceEEEecCCCCCCCCCce
Q psy8428 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTL 149 (328)
Q Consensus 70 vV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~ 149 (328)
+++||++ ||++|+.++|.+++++..+ +.++|+++++++.++||++ +|++++ .+| +..
T Consensus 3 vv~f~a~----~C~~C~~~~~~L~~~~~~~-----------~~~vdid~~~~l~~~~g~~-vPtl~~-~~G------~~v 59 (87)
T 1ttz_A 3 LTLYQRD----DCHLCDQAVEALAQARAGA-----------FFSVFIDDDAALESAYGLR-VPVLRD-PMG------REL 59 (87)
T ss_dssp EEEEECS----SCHHHHHHHHHHHHTTCCC-----------EEEEECTTCHHHHHHHTTT-CSEEEC-TTC------CEE
T ss_pred EEEEECC----CCchHHHHHHHHHHHHHhh-----------eEEEECCCCHHHHHHhCCC-cCeEEE-ECC------EEE
Confidence 6889999 9999999999998876332 5799999999999999998 999998 554 122
Q ss_pred eeeecccCHHHHHHHHHhhcC
Q psy8428 150 DIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 150 ~~~~~~~~a~~l~~fl~~~t~ 170 (328)
.++.+.+++.+||++.+.
T Consensus 60 ---~g~~~~~~L~~~l~~~~~ 77 (87)
T 1ttz_A 60 ---DWPFDAPRLRAWLDAAPH 77 (87)
T ss_dssp ---ESCCCHHHHHHHHHTCC-
T ss_pred ---eCCCCHHHHHHHHHHHHH
Confidence 267889999999987543
No 119
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.16 E-value=1.3e-10 Score=102.89 Aligned_cols=100 Identities=17% Similarity=0.232 Sum_probs=74.0
Q ss_pred hhHHHHH-HcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC--ChhhHHHcCCCc
Q psy8428 54 QKYKEYI-KNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE--GSDVFQMLRLNT 130 (328)
Q Consensus 54 ~nf~~~v-~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~--~~~lf~~l~v~s 130 (328)
+.+++.+ .+. .+-.++++|++++ ||++|++++|.++++|+. . +++.|+++|+++ +++++++|||++
T Consensus 10 ~~~~~~~~~~~-~~~v~lv~f~~~~---~C~~C~~~~~~~~~la~~-~------~~v~~~~vd~~~~~~~~~~~~~~v~~ 78 (226)
T 1a8l_A 10 KVIKEEFFSKM-VNPVKLIVFVRKD---HCQYCDQLKQLVQELSEL-T------DKLSYEIVDFDTPEGKELAKRYRIDR 78 (226)
T ss_dssp HHHHHHTGGGC-CSCEEEEEEECSS---SCTTHHHHHHHHHHHHTT-C------TTEEEEEEETTSHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHhc-CCCeEEEEEecCC---CCchhHHHHHHHHHHHhh-C------CceEEEEEeCCCcccHHHHHHcCCCc
Confidence 3455554 222 2334568899874 999999999999999964 2 479999999999 999999999999
Q ss_pred CceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 131 APIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 131 vP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
+||+++|++|.. ....+ .|..+.+++.+|+.+.+
T Consensus 79 ~Pt~~~~~~g~~----~~~~~-~G~~~~~~l~~~l~~~l 112 (226)
T 1a8l_A 79 APATTITQDGKD----FGVRY-FGLPAGHEFAAFLEDIV 112 (226)
T ss_dssp SSEEEEEETTBC----CSEEE-ESCCCTTHHHHHHHHHH
T ss_pred CceEEEEcCCce----eeEEE-eccCcHHHHHHHHHHHH
Confidence 999999987621 11122 35566777888877644
No 120
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.14 E-value=9.2e-11 Score=93.49 Aligned_cols=77 Identities=10% Similarity=0.291 Sum_probs=66.4
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcCCCcCceEEEecCCCCCCCCC
Q psy8428 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSD 147 (328)
Q Consensus 68 ~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~ 147 (328)
..+++||++ ||++|+.++|.++++++.+ ++.|.++|+++++++.++||++ +|++++|.+| +
T Consensus 30 ~~vv~y~~~----~C~~C~~a~~~L~~l~~e~--------~i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG------~ 90 (107)
T 2fgx_A 30 RKLVVYGRE----GCHLCEEMIASLRVLQKKS--------WFELEVINIDGNEHLTRLYNDR-VPVLFAVNED------K 90 (107)
T ss_dssp CCEEEEECS----SCHHHHHHHHHHHHHHHHS--------CCCCEEEETTTCHHHHHHSTTS-CSEEEETTTT------E
T ss_pred cEEEEEeCC----CChhHHHHHHHHHHHHHhc--------CCeEEEEECCCCHHHHHHhCCC-CceEEEEECC------E
Confidence 468999999 9999999999999999876 3889999999999999999997 9999999876 1
Q ss_pred ceeeeecccCHHHHHHHH
Q psy8428 148 TLDIQRVGYSAEAIVKWI 165 (328)
Q Consensus 148 ~~~~~~~~~~a~~l~~fl 165 (328)
.. ..++.+.++|.+||
T Consensus 91 ~v--~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 91 EL--CHYFLDSDVIGAYL 106 (107)
T ss_dssp EE--ECSSCCCHHHHHHH
T ss_pred EE--EecCCCHHHHHHHh
Confidence 22 13678889999887
No 121
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.14 E-value=5.8e-11 Score=94.14 Aligned_cols=73 Identities=14% Similarity=0.122 Sum_probs=59.4
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc------CChhhHHHcCCCcCceEEEecCCC
Q psy8428 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD------EGSDVFQMLRLNTAPIFMHFPAKG 141 (328)
Q Consensus 68 ~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~------~~~~lf~~l~v~svP~l~~f~p~g 141 (328)
.++|.|||+ ||++|+.++|+|+++|+.+. .+|++ ++++++++++|+++||+++ .|
T Consensus 14 ~~vV~F~A~----WC~~C~~~~p~~~~~a~~~~------------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G- 74 (106)
T 3kp8_A 14 IGGTMYGAY----WCPHCQDQKELFGAAFDQVP------------YVECSPNGPGTPQAQECTEAGITSYPTWII--NG- 74 (106)
T ss_dssp HTCEEEECT----TCHHHHHHHHHHGGGGGGSC------------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TT-
T ss_pred CEEEEEECC----CCHHHHHHHHHHHHHHHhCC------------EEEEecccccchhHHHHHHcCCeEeCEEEE--CC-
Confidence 467999999 99999999999999986651 45665 6889999999999999777 43
Q ss_pred CCCCCCceeeeecccCHHHHHHHHHh
Q psy8428 142 KPKPSDTLDIQRVGYSAEAIVKWIAD 167 (328)
Q Consensus 142 ~~~~~~~~~~~~~~~~a~~l~~fl~~ 167 (328)
.. ..|..+.++|.+|+.-
T Consensus 75 -----~~---~~G~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 75 -----RT---YTGVRSLEALAVASGY 92 (106)
T ss_dssp -----EE---EESCCCHHHHHHHHTC
T ss_pred -----EE---ecCCCCHHHHHHHhCC
Confidence 12 2578899999999843
No 122
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.13 E-value=2.9e-11 Score=104.55 Aligned_cols=80 Identities=19% Similarity=0.280 Sum_probs=66.0
Q ss_pred EeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHH-H--HHHHHHcccccCCCCcEEEEEEECcCChhhHHHc
Q psy8428 50 RFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDE-Y--TIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (328)
Q Consensus 50 ~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pe-f--~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l 126 (328)
.-+++.|++... . +.+|+|.|||+ ||++|+.++|+ | +++++.+. +++.++++|.++++++.+.|
T Consensus 26 ~~~~ea~~~A~~-~--~KpVlvdF~A~----WC~~Ck~m~~~~f~~~~va~~l~------~~fv~ikVD~de~~~l~~~y 92 (173)
T 3ira_A 26 PWGEEAFEKARK-E--NKPVFLSIGYS----TCHWCHMMAHESFEDEEVAGLMN------EAFVSIKVDREERPDIDNIY 92 (173)
T ss_dssp CSSHHHHHHHHH-H--TCCEEEEEECT----TCHHHHHHHHHTTTCHHHHHHHH------HHCEEEEEETTTCHHHHHHH
T ss_pred CcCHHHHHHHHH-h--CCCEEEecccc----hhHhhccccccccCCHHHHHHHH------hcCceeeeCCcccCcHHHHH
Confidence 445678877654 2 45799999999 99999999994 3 57887764 36899999999999999888
Q ss_pred --------CCCcCceEEEecCCCC
Q psy8428 127 --------RLNTAPIFMHFPAKGK 142 (328)
Q Consensus 127 --------~v~svP~l~~f~p~g~ 142 (328)
|++++|+++++.|.|+
T Consensus 93 ~~~~q~~~gv~g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 93 MTVCQIILGRGGWPLNIIMTPGKK 116 (173)
T ss_dssp HHHHHHHHSCCCSSEEEEECTTSC
T ss_pred HHHHHHHcCCCCCcceeeECCCCC
Confidence 9999999999987654
No 123
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.10 E-value=5.3e-10 Score=90.00 Aligned_cols=86 Identities=16% Similarity=0.274 Sum_probs=71.5
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC----------------------ChhhHH
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE----------------------GSDVFQ 124 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~----------------------~~~lf~ 124 (328)
..+++.|+++ ||++|+...|+++++++.+. ++.|..+|+++ +.++.+
T Consensus 25 k~~lv~f~~~----~C~~C~~~~~~l~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 93 (136)
T 1lu4_A 25 KPAVLWFWTP----WCPFCNAEAPSLSQVAAANP-------AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWA 93 (136)
T ss_dssp SCEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHH
T ss_pred CEEEEEEECC----cChhHHHHHHHHHHHHHHCC-------CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHH
Confidence 4689999999 99999999999999998873 58899999887 678999
Q ss_pred HcCCCcCceEEEecCCCCCCCCCceeeee---cccCHHHHHHHHHhhc
Q psy8428 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQR---VGYSAEAIVKWIADRT 169 (328)
Q Consensus 125 ~l~v~svP~l~~f~p~g~~~~~~~~~~~~---~~~~a~~l~~fl~~~t 169 (328)
+|+++++|+++++.++|+. . ... |..+.+++.++|++.+
T Consensus 94 ~~~i~~~P~~~lid~~G~i-----~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 94 RYNVPWQPAFVFYRADGTS-----T-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp HTTCCSSSEEEEECTTSCE-----E-EECCSSSCCCHHHHHHHHHHC-
T ss_pred hcCCCCCCEEEEECCCCcE-----E-EEEcCCCccCHHHHHHHHHHHh
Confidence 9999999999999765432 2 234 5678999999998754
No 124
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.09 E-value=5.8e-10 Score=90.95 Aligned_cols=104 Identities=15% Similarity=0.329 Sum_probs=79.3
Q ss_pred EEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC------------
Q psy8428 49 LRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF------------ 116 (328)
Q Consensus 49 I~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~------------ 116 (328)
..++.+.+..... ++..+++.|+++ ||++|+...|+++++++.+. +++.|..+|+
T Consensus 15 ~~~~g~~~~~~~~---~gk~~lv~f~~~----~C~~C~~~~~~l~~l~~~~~------~~~~~~~v~~~~~~~~~~~~~~ 81 (148)
T 2b5x_A 15 AWLNGEVTREQLI---GEKPTLIHFWSI----SCHLCKEAMPQVNEFRDKYQ------DQLNVVAVHMPRSEDDLDPGKI 81 (148)
T ss_dssp EEESCCCCHHHHT---TTSCEEEEEECT----TCHHHHHHHHHHHHHHHHHT------TTSEEEEEECCCSTTTSSHHHH
T ss_pred ccccCcccchhhc---CCCEEEEEEEcC----CCHHHHHHhHHHHHHHHHhc------CCcEEEEEEcCCCccccCHHHH
Confidence 4556666554432 234689999999 99999999999999999885 2388888885
Q ss_pred ---------------cCChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 117 ---------------DEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 117 ---------------~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
+.+.++.++|+++++|+++++.++|+ ......|..+.+++.++|++.+.
T Consensus 82 ~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~-----i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 82 KETAAEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQ-----LRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp HHHHHHTTCCSCEEECSSCHHHHHTCCCCSSEEEEECTTCB-----EEEEEESCSTTHHHHHHHHHHHT
T ss_pred HHHHHHcCCCcceEECCchhHHHHhCCCCCCEEEEECCCCc-----EEEEecCCCCHHHHHHHHHHHHh
Confidence 44678999999999999999965543 22333466788999999988764
No 125
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.06 E-value=8.5e-11 Score=100.01 Aligned_cols=103 Identities=15% Similarity=0.245 Sum_probs=72.3
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChh-hHHHcCC--Cc
Q psy8428 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD-VFQMLRL--NT 130 (328)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~-lf~~l~v--~s 130 (328)
++++.... . +..++|.|||+ ||++|+.+.|.++++++.+. .++.|+.+|++++++ +.+++++ ++
T Consensus 37 ~~~~~~~~-~--~k~vlv~F~a~----WC~~C~~~~p~l~~~~~~~~------~~~~~~~v~~d~~~~~~~~~~~~~~~~ 103 (164)
T 1sen_A 37 DGKKEAAA-S--GLPLMVIIHKS----WCGACKALKPKFAESTEISE------LSHNFVMVNLEDEEEPKDEDFSPDGGY 103 (164)
T ss_dssp HHHHHHHH-H--TCCEEEEEECT----TCHHHHHHHHHHHTCHHHHH------HHTTSEEEEEEGGGSCSCGGGCTTCSC
T ss_pred HHHHHHHh-c--CCeEEEEEECC----CCHHHHHHHHHHHHHHHHhh------cCCeEEEEEecCCchHHHHHhcccCCc
Confidence 45555443 2 34699999999 99999999999999887653 246688889988776 7888998 66
Q ss_pred CceEEEecCCCCCCCCCceee------eecccCHHHHHHHHHhhcC
Q psy8428 131 APIFMHFPAKGKPKPSDTLDI------QRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 131 vP~l~~f~p~g~~~~~~~~~~------~~~~~~a~~l~~fl~~~t~ 170 (328)
+||+++|.++|+.... .... .....+.+++.++|++.+.
T Consensus 104 ~Pt~~~~d~~G~~~~~-~~G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 104 IPRILFLDPSGKVHPE-IINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp SSEEEEECTTSCBCTT-CCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCEEEE-EeCCCCccchhcccCCHHHHHHHHHHHHH
Confidence 9999999554432110 0000 0013678999999887653
No 126
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.06 E-value=9.4e-10 Score=89.37 Aligned_cols=87 Identities=14% Similarity=0.271 Sum_probs=72.0
Q ss_pred CCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC-------------------------C
Q psy8428 65 RNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------------------------G 119 (328)
Q Consensus 65 r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~-------------------------~ 119 (328)
++..+++.|+++ ||++|+...|.++++++.+.. +++.|..++++. +
T Consensus 33 ~gk~~ll~f~~~----~C~~C~~~~~~l~~~~~~~~~-----~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~ 103 (145)
T 3erw_A 33 KGQKTILHFWTS----WCPPCKKELPQFQSFYDAHPS-----DSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSK 103 (145)
T ss_dssp TTSEEEEEEECS----SCHHHHHHHHHHHHHHHHCCC-----SSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSS
T ss_pred CCCEEEEEEECC----CCHHHHHHHHHHHHHHHHcCC-----CCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCc
Confidence 556799999999 999999999999999998852 469999999864 6
Q ss_pred hhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHH
Q psy8428 120 SDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWI 165 (328)
Q Consensus 120 ~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl 165 (328)
.++.++|+++++|+++++.+.|+ ......|..+.+++.++|
T Consensus 104 ~~~~~~~~v~~~P~~~lid~~G~-----i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 104 GELMKEYHIITIPTSFLLNEKGE-----IEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp SHHHHHTTCCEESEEEEECTTCC-----EEEEEESCCCHHHHHHHH
T ss_pred hhHHHhcCcCccCeEEEEcCCCc-----EEEEEcCCcCHHHHHHhh
Confidence 78999999999999999966543 233335677899999887
No 127
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.05 E-value=1.3e-09 Score=87.43 Aligned_cols=87 Identities=18% Similarity=0.259 Sum_probs=71.3
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC-----------------------ChhhH
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-----------------------GSDVF 123 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~-----------------------~~~lf 123 (328)
..+++.|+++ ||++|+...|+++++++.+. ++.|..+|.++ +.++.
T Consensus 26 k~~ll~f~~~----~C~~C~~~~~~l~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 94 (136)
T 1zzo_A 26 KPAVLWFWAP----WCPTCQGEAPVVGQVAASHP-------EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVW 94 (136)
T ss_dssp SCEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHH
T ss_pred CeEEEEEEcC----CChhHHHHHHHHHHHHHHcC-------CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHH
Confidence 4689999999 99999999999999998873 58888888853 57889
Q ss_pred HHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 124 ~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
++|+++++|+++++.++|+ .. ...|..+.+++.++|++.++
T Consensus 95 ~~~~i~~~P~~~~id~~g~-----i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 95 ANFGVTQQPAYAFVDPHGN-----VD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp HHTTCCSSSEEEEECTTCC-----EE-EEESCCCHHHHHHHHHHHC-
T ss_pred HHcCCCCCceEEEECCCCC-----EE-EEecCCCHHHHHHHHHHHhc
Confidence 9999999999999976643 22 33466789999999988753
No 128
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.04 E-value=1.2e-09 Score=90.49 Aligned_cols=92 Identities=9% Similarity=0.030 Sum_probs=74.2
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC------------------------Chh
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE------------------------GSD 121 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~------------------------~~~ 121 (328)
+..++|.|||+ ||++|+...|+++++++.+.. +++.+..+++++ ..+
T Consensus 24 gk~vlv~F~a~----wC~~C~~~~~~l~~l~~~~~~-----~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (151)
T 3raz_A 24 APVRIVNLWAT----WCGPCRKEMPAMSKWYKAQKK-----GSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRN 94 (151)
T ss_dssp SSEEEEEEECT----TCHHHHHHHHHHHHHHHTSCT-----TTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHH
T ss_pred CCEEEEEEEcC----cCHHHHHHHHHHHHHHHHhcc-----CCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHH
Confidence 45799999999 999999999999999998842 469999999862 456
Q ss_pred hHHHcC--CCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCC
Q psy8428 122 VFQMLR--LNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (328)
Q Consensus 122 lf~~l~--v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~ 171 (328)
+.++|+ ++++|+.+++.+.|+. .....|..+.+++.++|++....
T Consensus 95 ~~~~~~~~v~~~P~~~lid~~G~i-----~~~~~g~~~~~~l~~~l~~l~~~ 141 (151)
T 3raz_A 95 FMKTYGNTVGVLPFTVVEAPKCGY-----RQTITGEVNEKSLTDAVKLAHSK 141 (151)
T ss_dssp HHHTTTCCSCCSSEEEEEETTTTE-----EEECCSCCCHHHHHHHHHHHHTC
T ss_pred HHHHhCCccCCCCEEEEECCCCcE-----EEEECCCCCHHHHHHHHHHHHHH
Confidence 788899 9999999999766532 23335677899999999886553
No 129
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.03 E-value=1.6e-09 Score=90.34 Aligned_cols=93 Identities=15% Similarity=0.144 Sum_probs=75.2
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHc-------------------
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML------------------- 126 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l------------------- 126 (328)
+..++|.||++ ||++|+...|+++++++.+.. .++.|..++++++++..+++
T Consensus 34 gk~vlv~f~~~----~C~~C~~~~~~l~~l~~~~~~-----~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (165)
T 3or5_A 34 GKAYIVNFFAT----WCPPCRSEIPDMVQVQKTWAS-----RGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIR 104 (165)
T ss_dssp TCEEEEEEECT----TSHHHHHHHHHHHHHHHHHTT-----TTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHH
T ss_pred CCEEEEEEEcC----cCHHHHHHHHHHHHHHHHhcc-----CCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHH
Confidence 34689999999 999999999999999999862 35999999999988777776
Q ss_pred --------CCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc
Q psy8428 127 --------RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 127 --------~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~ 172 (328)
+++++|+++++.+.|+ ......+..+.+++.++|++.++..
T Consensus 105 ~~~~~~~~~i~~~P~~~lid~~G~-----i~~~~~g~~~~~~l~~~l~~~l~~~ 153 (165)
T 3or5_A 105 AFNGYIDGGITGIPTSFVIDASGN-----VSGVIVGPRSKADFDRIVKMALGAK 153 (165)
T ss_dssp HHHTTSTTCSCSSSEEEEECTTSB-----EEEEECSCCCHHHHHHHHHHHHC--
T ss_pred HHhhhhccCCCCCCeEEEECCCCc-----EEEEEcCCCCHHHHHHHHHHHHhhh
Confidence 9999999999976543 2333346678999999999887643
No 130
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.03 E-value=1.6e-09 Score=89.23 Aligned_cols=93 Identities=12% Similarity=0.181 Sum_probs=75.2
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCCh-----------------------hh
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS-----------------------DV 122 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~-----------------------~l 122 (328)
+..++|.|+++ ||++|+...|+++++++.+.. .++.|..+++++++ ++
T Consensus 30 gk~~lv~f~~~----~C~~C~~~~~~l~~l~~~~~~-----~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 100 (152)
T 2lja_A 30 GKYIYIDVWAT----WCGPCRGELPALKELEEKYAG-----KDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTF 100 (152)
T ss_dssp TSEEEEEECCS----SCCGGGGTHHHHHHHHHHSTT-----SSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHH
T ss_pred CCEEEEEEECC----cCHhHHHHhHHHHHHHHHhcc-----CCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhH
Confidence 44689999999 999999999999999998852 35999999998865 78
Q ss_pred HHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc
Q psy8428 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 123 f~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~ 172 (328)
.++|+++++|+++++.+.|+. .....+..+.+++.++|++..+-+
T Consensus 101 ~~~~~v~~~P~~~lid~~G~i-----~~~~~g~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 101 MDAYLINGIPRFILLDRDGKI-----ISANMTRPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp HHHTTCCSSCCEEEECTTSCE-----EESSCCCTTCHHHHHHHHHHHTCC
T ss_pred HHHcCcCCCCEEEEECCCCeE-----EEccCCCCCHHHHHHHHHHHhccc
Confidence 999999999999999876532 222235567899999998876643
No 131
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.03 E-value=1.7e-09 Score=89.33 Aligned_cols=92 Identities=12% Similarity=0.168 Sum_probs=74.3
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC----------------------ChhhHH
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE----------------------GSDVFQ 124 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~----------------------~~~lf~ 124 (328)
..++|.|+++ ||++|+...|.++++++.+.. .++.|..+++++ +.++.+
T Consensus 27 k~vlv~F~~~----~C~~C~~~~~~l~~~~~~~~~-----~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 97 (151)
T 2f9s_A 27 KGVFLNFWGT----WCEPCKKEFPYMANQYKHFKS-----QGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLD 97 (151)
T ss_dssp SEEEEEEECT----TCHHHHHHHHHHHHHHHHHGG-----GTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHH
T ss_pred CEEEEEEECC----CCHHHHHHHHHHHHHHHHhcc-----CCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHH
Confidence 4689999999 999999999999999998863 358899998876 357899
Q ss_pred HcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc
Q psy8428 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 125 ~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~ 172 (328)
+|+++++|+++++.+.|+ ......|..+.+++.++|++.+...
T Consensus 98 ~~~v~~~P~~~lid~~G~-----i~~~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 98 AYDVSPLPTTFLINPEGK-----VVKVVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp HTTCCSSCEEEEECTTSE-----EEEEEESCCCHHHHHHHHHHHSCC-
T ss_pred hcCCCCCCeEEEECCCCc-----EEEEEeCCCCHHHHHHHHHHHHhhh
Confidence 999999999999966543 2333346678999999999887643
No 132
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.99 E-value=1.1e-09 Score=91.32 Aligned_cols=112 Identities=16% Similarity=0.209 Sum_probs=79.1
Q ss_pred CeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHccccc-----------------------
Q psy8428 47 AVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQ----------------------- 103 (328)
Q Consensus 47 ~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~----------------------- 103 (328)
.+..++.+.++.. ..++..++|.|||+ ||++|+...|+++++++.+...+
T Consensus 22 ~l~~~~g~~~~~~---~~~gk~vlv~F~a~----~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~ 94 (164)
T 2h30_A 22 TMKTADNRPASVY---LKKDKPTLIKFWAS----WCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKW 94 (164)
T ss_dssp TCEETTSSBGGGG---CCTTSCEEEEECCT----TCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHH
T ss_pred ccCCCCCCEeeHH---HhCCCEEEEEEECC----CCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHH
Confidence 3455565555432 22345799999999 99999999999999998874210
Q ss_pred CCCCcEEEEEEECcCChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 104 MYSNKLFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 104 ~~~~~v~F~~vD~~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
....++.+..++.+++.++.++|+++++|+++++.+.|+ ......|..+.+++.++|++.+.
T Consensus 95 ~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~-----i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 95 YAGLNYPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGD-----VQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp HTTSCCTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSC-----EEEEEESCCCHHHHHHHHHCTTC
T ss_pred HHhCCCCcceEEEcCchHHHHHcCCCccceEEEECCCCc-----EEEEEcCCCCHHHHHHHHHHHHH
Confidence 000022224566677889999999999999999966543 22333466789999999988765
No 133
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.98 E-value=3.5e-09 Score=84.56 Aligned_cols=88 Identities=15% Similarity=0.224 Sum_probs=69.9
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC----------------------------c
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF----------------------------D 117 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~----------------------------~ 117 (328)
+..+++.||++ ||++|+...|+++++++.+. +++.+..++. +
T Consensus 22 gk~~lv~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 91 (138)
T 4evm_A 22 GKKVYLKFWAS----WCSICLASLPDTDEIAKEAG------DDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVD 91 (138)
T ss_dssp TSEEEEEECCT----TCHHHHHHHHHHHHHHHTCT------TTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEEC
T ss_pred CCEEEEEEEcC----cCHHHHHHHHHHHHHHHHhC------CCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEEC
Confidence 34689999999 99999999999999998853 4688888853 3
Q ss_pred CChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhh
Q psy8428 118 EGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (328)
Q Consensus 118 ~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~ 168 (328)
.+.++.++|+++++|+++++.+.|+ ......|..+.+++.++|++.
T Consensus 92 ~~~~~~~~~~v~~~P~~~lid~~G~-----i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 92 PSGKLLETYGVRSYPTQAFIDKEGK-----LVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp TTCHHHHHTTCCSSSEEEEECTTCC-----EEEEEESCCCHHHHHHHHHHC
T ss_pred cchHHHHHcCcccCCeEEEECCCCc-----EEEeecCCCcHHHHHHHHHhh
Confidence 4567999999999999999966543 233335677899999998763
No 134
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.96 E-value=2.5e-09 Score=87.30 Aligned_cols=89 Identities=7% Similarity=0.039 Sum_probs=70.0
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChh------------------------
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD------------------------ 121 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~------------------------ 121 (328)
+..+++.||++ ||++|+...|+++++++.+.. .++.|..++++++++
T Consensus 31 gk~vll~f~~~----~C~~C~~~~~~l~~l~~~~~~-----~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 101 (148)
T 3hcz_A 31 AKYTILFFWDS----QCGHCQQETPKLYDWWLKNRA-----KGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHT 101 (148)
T ss_dssp CSEEEEEEECG----GGCTTCSHHHHHHHHHHHHGG-----GTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCC
T ss_pred CCEEEEEEECC----CCccHHHHHHHHHHHHHHhcc-----CCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccch
Confidence 45799999999 999999999999999999863 259999999998776
Q ss_pred -hHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhh
Q psy8428 122 -VFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (328)
Q Consensus 122 -lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~ 168 (328)
+.++|+++++|+++++.+.|+. .....+..+.+++.+.+.+.
T Consensus 102 ~~~~~~~i~~~P~~~lid~~G~i-----~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 102 DFKITYDIYATPVLYVLDKNKVI-----IAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp CHHHHHCCCSSCEEEEECTTCBE-----EEESCCGGGHHHHHHHHHHH
T ss_pred hHHHhcCcCCCCEEEEECCCCcE-----EEecCCHHHHHHHHHHHHHH
Confidence 9999999999999999665432 22223445566666666554
No 135
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.95 E-value=6.6e-09 Score=85.50 Aligned_cols=93 Identities=14% Similarity=0.117 Sum_probs=72.7
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCCh----------------------hhH
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS----------------------DVF 123 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~----------------------~lf 123 (328)
+..+++.|+++ ||++|+...|.++++++.+.. ..+.+..++++.++ ++.
T Consensus 28 gk~vll~f~~~----~C~~C~~~~~~l~~l~~~~~~-----~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 98 (152)
T 3gl3_A 28 GSVVYLDFWAS----WCGPCRQSFPWMNQMQAKYKA-----KGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTP 98 (152)
T ss_dssp TSEEEEEEECT----TCTHHHHHHHHHHHHHHHHGG-----GTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHH
T ss_pred CCEEEEEEECC----cCHHHHHHHHHHHHHHHHhhc-----CCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhH
Confidence 34689999999 999999999999999999863 24889999988765 678
Q ss_pred HHcCCCcCceEEEecCCCCCCCCCceeeeec--ccCHHHHHHHHHhhcCCc
Q psy8428 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRV--GYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 124 ~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~--~~~a~~l~~fl~~~t~~~ 172 (328)
+.|+++++|+++++.+.|+. .....+ +.+.+++.++|++.++.+
T Consensus 99 ~~~~v~~~P~~~lid~~G~i-----~~~~~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 99 RLYGVKGMPTSFLIDRNGKV-----LLQHVGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp HHTTCCSSSEEEEECTTSBE-----EEEEESCCTTTHHHHHHHHHHHTC--
T ss_pred HHcCCCCCCeEEEECCCCCE-----EEEEccCCCcCHHHHHHHHHHHHccc
Confidence 89999999999999665432 222223 345689999999987644
No 136
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.95 E-value=6.3e-09 Score=84.84 Aligned_cols=88 Identities=17% Similarity=0.212 Sum_probs=70.4
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHc-ccccCCCCcEEEEEEECcC-------------------------C
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSF-RYSQMYSNKLFFILVDFDE-------------------------G 119 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~-~~~~~~~~~v~F~~vD~~~-------------------------~ 119 (328)
+..+++.||++ ||++|+...|+++++++.+ .. .++.|..++++. +
T Consensus 33 gk~vll~F~~~----~C~~C~~~~~~l~~l~~~~~~~-----~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~ 103 (148)
T 3fkf_A 33 NRYLLLNFWAS----WCDPQPEANAELKRLNKEYKKN-----KNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLS 103 (148)
T ss_dssp TSEEEEEEECG----GGCCCHHHHHHHHHHHHHTTTC-----TTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGG
T ss_pred CcEEEEEEECC----CCHHHHHHhHHHHHHHHHhcCC-----CCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcc
Confidence 34799999999 9999999999999999988 42 359999998887 3
Q ss_pred hhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 120 SDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 120 ~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
.++.++|+++++|+++++.+.|+. .. ...+.+++.++|++.+.
T Consensus 104 ~~~~~~~~v~~~P~~~lid~~G~i-----~~---~~~~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 104 SETAKQYAILTLPTNILLSPTGKI-----LA---RDIQGEALTGKLKELLK 146 (148)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSBE-----EE---ESCCHHHHHHHHHHHC-
T ss_pred hHHHHhcCCCCcCEEEEECCCCeE-----EE---ecCCHHHHHHHHHHHHc
Confidence 488999999999999999665432 11 12278899999988754
No 137
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.95 E-value=3e-09 Score=86.68 Aligned_cols=88 Identities=13% Similarity=0.259 Sum_probs=69.0
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHH---HHHHcccccCCCCcEEEEEEECcCChhh--------------------
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTI---VANSFRYSQMYSNKLFFILVDFDEGSDV-------------------- 122 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~---vA~s~~~~~~~~~~v~F~~vD~~~~~~l-------------------- 122 (328)
+..+++.|||+ ||++|+...|.+++ +.+.+.. .++.+..++++++++.
T Consensus 27 gk~vll~F~a~----~C~~C~~~~~~l~~~~~l~~~~~~-----~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~ 97 (142)
T 3ewl_A 27 AQYTMLFFYDP----DCSNCRKFEKLFAEIPAFVEMVEN-----GTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAG 97 (142)
T ss_dssp CSEEEEEECCS----SCHHHHHHHHHHHTCHHHHHHHHH-----TSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTC
T ss_pred CCEEEEEEECC----CCccHHHHHHHHHHhHHHHHHhcc-----CCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCcc
Confidence 44799999999 99999999999998 8887753 3599999999876654
Q ss_pred ----HHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 123 ----FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 123 ----f~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
.+.|+++++|+++++.+.|+. . .+..+.+++.++|++..+
T Consensus 98 ~~~~~~~~~v~~~P~~~lid~~G~i-----~---~~~~~~~~l~~~l~~~~~ 141 (142)
T 3ewl_A 98 DIRTRQLYDIRATPTIYLLDGRKRV-----I---LKDTSMEQLIDYLATQAG 141 (142)
T ss_dssp HHHHTTCSCCCSSSEEEEECTTCBE-----E---ECSCCHHHHHHHHHC---
T ss_pred chhhHHHcCCCCCCeEEEECCCCCE-----E---ecCCCHHHHHHHHHHHcc
Confidence 348999999999999766432 1 245789999999988754
No 138
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.95 E-value=4.3e-10 Score=94.99 Aligned_cols=93 Identities=9% Similarity=0.066 Sum_probs=62.0
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc-CChhhHHHcCCCcCceEEEecCCCCCC
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-EGSDVFQMLRLNTAPIFMHFPAKGKPK 144 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~-~~~~lf~~l~v~svP~l~~f~p~g~~~ 144 (328)
+.+++|+|||+ ||++|+.++|++.+.++.... .+..|..+|+| ++.+...+++++++||+++|.++|+..
T Consensus 44 ~KpVlV~F~A~----WC~~Ck~m~p~~~~~~~~~~~-----~~~~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v 114 (151)
T 3ph9_A 44 KKPLMVIHHLE----DCQYSQALKKVFAQNEEIQEM-----AQNKFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVR 114 (151)
T ss_dssp TCCEEEEECCT----TCHHHHHHHHHHHHCHHHHHH-----HHHTCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSCBC
T ss_pred CCcEEEEEECC----CCHhHHHHHHHHhcCHHHHHH-----hhcCeEEEEecCCchhhHhhcCCCCCCEEEEECCCCCEE
Confidence 45699999999 999999999999875432111 01346666665 456778899999999999998665432
Q ss_pred CC-------CceeeeecccCHHHHHHHHHhhc
Q psy8428 145 PS-------DTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 145 ~~-------~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
.. ..|.+ ...+.+++.+.+++.+
T Consensus 115 ~~~~G~~~~~~~~~--~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 115 ADIAGRYSNRLYTY--EPRDLPLLIENMKKAL 144 (151)
T ss_dssp TTCCCSCTTSTTCC--CGGGHHHHHHHHHHHH
T ss_pred EEEeCCcCCccccc--chhhHHHHHHHHHHHH
Confidence 10 00111 1234567777776654
No 139
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.95 E-value=5.6e-09 Score=86.70 Aligned_cols=91 Identities=13% Similarity=0.138 Sum_probs=72.3
Q ss_pred CccEEEEEeeCCCCCCCccchh-hHHHHHHHHHHcccccCCCCcEEEEEEEC----------------------------
Q psy8428 66 NYSAIVMFTALAPQRNCHICVS-ASDEYTIVANSFRYSQMYSNKLFFILVDF---------------------------- 116 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~-~~pef~~vA~s~~~~~~~~~~v~F~~vD~---------------------------- 116 (328)
+..++|.|||+ ||++|+. +.|.++++++.+.. +++.|..+++
T Consensus 30 gk~vlv~F~a~----~C~~C~~e~~~~l~~l~~~~~~-----~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (160)
T 3lor_A 30 GKVVVVEVFQM----LCPGCVNHGVPQAQKIHRMIDE-----SQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAV 100 (160)
T ss_dssp TSEEEEEEECT----TCHHHHHTHHHHHHHHHHHSCT-----TTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEE
T ss_pred CCEEEEEEEcC----CCcchhhhhhHHHHHHHHHhCc-----CCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEE
Confidence 34799999999 9999999 69999999999862 3588888875
Q ss_pred cCChh------hHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 117 DEGSD------VFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 117 ~~~~~------lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
+...+ +.++|+++++|+.+++.+.|+ ......|..+.+++.++|++.+.
T Consensus 101 d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~-----i~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 101 DMPREGQRIPSTMKKYRLEGTPSIILADRKGR-----IRQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp ECCCTTCSSCHHHHHTTCCSSSEEEEECTTSB-----EEEEEESCCCHHHHHHHHHHHHT
T ss_pred CCccccchhhhHHHhcccCccceEEEECCCCc-----EEEEecCcCCHHHHHHHHHHHHh
Confidence 23334 899999999999999976643 23333567788999999988765
No 140
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.94 E-value=5e-09 Score=86.72 Aligned_cols=88 Identities=15% Similarity=0.159 Sum_probs=70.0
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC-------------------------Chh
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------------------------GSD 121 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~-------------------------~~~ 121 (328)
..+++.||++ ||++|+...|+++++++.+.. .++.+..+++++ +.+
T Consensus 30 k~vll~F~a~----~C~~C~~~~~~l~~l~~~~~~-----~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 100 (152)
T 2lrn_A 30 KYVLVDFWFA----GCSWCRKETPYLLKTYNAFKD-----KGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKD 100 (152)
T ss_dssp SEEEEEEECT----TCTTHHHHHHHHHHHHHHHTT-----TTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHH
T ss_pred CEEEEEEECC----CChhHHHHHHHHHHHHHHhcc-----CCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHH
Confidence 4689999999 999999999999999998862 358999999987 578
Q ss_pred hHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCC
Q psy8428 122 VFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (328)
Q Consensus 122 lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~ 171 (328)
+.++|+++++|+++++.+.|+. .. ...+.+++.++|++.++.
T Consensus 101 ~~~~~~v~~~P~~~lid~~G~i-----~~---~~~~~~~l~~~l~~l~~~ 142 (152)
T 2lrn_A 101 VLESYCIVGFPHIILVDPEGKI-----VA---KELRGDDLYNTVEKFVNG 142 (152)
T ss_dssp HHHHTTCCSSCEEEEECTTSEE-----EE---ECCCTTHHHHHHHHHHTS
T ss_pred HHHHhCCCcCCeEEEECCCCeE-----EE---eeCCHHHHHHHHHHHHhh
Confidence 9999999999999999665432 11 113567788888776653
No 141
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.93 E-value=8e-09 Score=85.08 Aligned_cols=91 Identities=18% Similarity=0.161 Sum_probs=71.8
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEE-----------------------CcCChhhH
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVD-----------------------FDEGSDVF 123 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD-----------------------~~~~~~lf 123 (328)
..+++.|+++ ||++|+...|+++++++.+.. .++.+..++ .+.+.++.
T Consensus 29 k~~lv~f~~~----~C~~C~~~~~~l~~l~~~~~~-----~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 99 (153)
T 2l5o_A 29 KVTLINFWFP----SCPGCVSEMPKIIKTANDYKN-----KNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVG 99 (153)
T ss_dssp CEEEEEEECT----TCTTHHHHHHHHHHHHHHGGG-----TTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHH
T ss_pred CEEEEEEECC----CCccHHHHHHHHHHHHHHhcc-----CCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHH
Confidence 4689999999 999999999999999998863 346666554 44577899
Q ss_pred HHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCC
Q psy8428 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (328)
Q Consensus 124 ~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~ 171 (328)
+.|+++++|+++++.+.|+. .....|..+.+++.++|++.+..
T Consensus 100 ~~~~i~~~P~~~lid~~G~i-----~~~~~g~~~~~~l~~~l~~ll~~ 142 (153)
T 2l5o_A 100 QAFGTQVYPTSVLIGKKGEI-----LKTYVGEPDFGKLYQEIDTAWRN 142 (153)
T ss_dssp HHHTCCSSSEEEEECSSSCC-----CEEEESSCCHHHHHHHHHHHHHC
T ss_pred HHcCCCccCeEEEECCCCcE-----EEEEcCCCCHHHHHHHHHHHHHh
Confidence 99999999999999766543 22234667899999999887653
No 142
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.91 E-value=8.1e-09 Score=85.63 Aligned_cols=91 Identities=12% Similarity=0.062 Sum_probs=71.9
Q ss_pred CccEEEEEeeCCCCCCCccchhh-HHHHHHHHHHcccccCCCCcEEEEEEECc---------------------------
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSA-SDEYTIVANSFRYSQMYSNKLFFILVDFD--------------------------- 117 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~-~pef~~vA~s~~~~~~~~~~v~F~~vD~~--------------------------- 117 (328)
+..++|.|||+ ||++|+.. .|.++++++.+.. +++.|..++++
T Consensus 28 gk~vlv~f~a~----wC~~C~~~~~~~l~~l~~~~~~-----~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (158)
T 3eyt_A 28 GKVIVIEAFQM----LCPGCVMHGIPLAQKVRAAFPE-----DKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGV 98 (158)
T ss_dssp TSEEEEEEECT----TCHHHHHTHHHHHHHHHHHSCT-----TTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEE
T ss_pred CCEEEEEEECC----cCcchhhhhhHHHHHHHHHhCc-----CCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEE
Confidence 44799999999 99999996 9999999999852 35888888753
Q ss_pred -CCh-----hhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 118 -EGS-----DVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 118 -~~~-----~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
... ++.+.|+++++|+.+++.+.|+ ......|..+.+++.+.|++.+.
T Consensus 99 d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~-----i~~~~~g~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 99 DQPGDGAMPRTMAAYQMRGTPSLLLIDKAGD-----LRAHHFGDVSELLLGAEIATLLG 152 (158)
T ss_dssp ECCCSSSSCHHHHHTTCCSSSEEEEECTTSE-----EEEEEESCCCHHHHHHHHHHHHT
T ss_pred cCccchhhHHHHHHcCCCCCCEEEEECCCCC-----EEEEEeCCCCHHHHHHHHHHHhc
Confidence 222 5899999999999999976643 22333467788999999988765
No 143
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.91 E-value=2.2e-08 Score=89.34 Aligned_cols=122 Identities=14% Similarity=0.206 Sum_probs=94.3
Q ss_pred hHHHHHHHHhhhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEE
Q psy8428 32 LGDRVLHLSEMNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFF 111 (328)
Q Consensus 32 ~~~~~~~L~~l~~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F 111 (328)
..+.+.+..+...-.-|.++|.+|+.++.. .+.+ .++++|..+ ||..|+++.+.|+++|+.+. +++.|
T Consensus 99 ~~~~l~~fi~~~~~plv~e~t~~n~~~~~~-~~~~-~~~l~f~~~----~~~~~~~~~~~~~~vAk~~k------~~i~F 166 (227)
T 4f9z_D 99 DATKLSRFIEINSLHMVTEYNPVTVIGLFN-SVIQ-IHLLLIMNK----ASPEYEENMHRYQKAAKLFQ------GKILF 166 (227)
T ss_dssp CHHHHHHHHHHHCCCSEEECCHHHHHHHHH-SSCC-EEEEEEECT----TSTTHHHHHHHHHHHHHHTT------TTCEE
T ss_pred CHHHHHHHHHHhCCCceeecCcccHHHHhc-cCCc-eEEEEEEcC----CcchHHHHHHHHHHHHHHhh------CCEEE
Confidence 345556665544445599999999999874 4333 455677777 99999999999999999986 56999
Q ss_pred EEEECcC--ChhhHHHcCCC--cCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 112 ILVDFDE--GSDVFQMLRLN--TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 112 ~~vD~~~--~~~lf~~l~v~--svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
+.+|.++ ++.+.+.+|++ ..|++.++..++. ..|....+..+++.|.+|+++.+
T Consensus 167 ~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~----~ky~~~~~~~t~~~i~~Fv~~~~ 224 (227)
T 4f9z_D 167 ILVDSGMKENGKVISFFKLKESQLPALAIYQTLDD----EWDTLPTAEVSVEHVQNFCDGFL 224 (227)
T ss_dssp EEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSC----CEEEETTCCCCHHHHHHHHHHHH
T ss_pred EEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCC----ccccCCcCCCCHHHHHHHHHHHh
Confidence 9999974 77889999999 8999999986521 23444335688999999998764
No 144
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.91 E-value=5.1e-09 Score=86.48 Aligned_cols=89 Identities=17% Similarity=0.187 Sum_probs=72.4
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC---------------------------cCC
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF---------------------------DEG 119 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~---------------------------~~~ 119 (328)
..+++.||++ ||++|+...|.++++++.+ ++.|..+++ +++
T Consensus 31 k~vll~f~~~----~C~~C~~~~~~l~~l~~~~--------~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 98 (154)
T 3ia1_A 31 KPAVIVFWAS----WCTVCKAEFPGLHRVAEET--------GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRP 98 (154)
T ss_dssp SSEEEEEECT----TCHHHHHHHHHHHHHHHHH--------CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCH
T ss_pred CeEEEEEEcc----cChhHHHHHHHHHHHHHHc--------CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccch
Confidence 4689999999 9999999999999999987 266777777 366
Q ss_pred hhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc
Q psy8428 120 SDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 120 ~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~ 172 (328)
.++.++|+++++|+++++.+.|+ ......|..+.+++.++|++.++-+
T Consensus 99 ~~~~~~~~v~~~P~~~lid~~G~-----i~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 99 HEVAARFKVLGQPWTFVVDREGK-----VVALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp HHHHTTSSBCSSCEEEEECTTSE-----EEEEEESBCCHHHHHHHHHHTTCCC
T ss_pred HHHHHHhCCCcccEEEEECCCCC-----EEEEEcCCCCHHHHHHHHHhccCcc
Confidence 88999999999999999966543 2333356778999999999987643
No 145
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.91 E-value=9.1e-09 Score=85.81 Aligned_cols=93 Identities=18% Similarity=0.200 Sum_probs=73.3
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC-------------------ChhhHHHc
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------------------GSDVFQML 126 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~-------------------~~~lf~~l 126 (328)
+..++|.||++ ||++|+...|.++++++.+.. +++.|..++.++ +.++.++|
T Consensus 41 gk~vll~F~~~----~C~~C~~~~~~l~~~~~~~~~-----~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 111 (158)
T 3hdc_A 41 GKIVLVNFWAS----WCPYCRDEMPSMDRLVKSFPK-----GDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRY 111 (158)
T ss_dssp TSEEEEEEECT----TCHHHHHHHHHHHHHHHHSST-----TSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHT
T ss_pred CCEEEEEEECC----cCHHHHHHHHHHHHHHHHccc-----CCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHh
Confidence 34689999999 999999999999999999862 469999999987 68999999
Q ss_pred CCCcCceEEEecCCCCCCCCCceeeeec--ccCHHHHHHHHHhhcCCc
Q psy8428 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRV--GYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 127 ~v~svP~l~~f~p~g~~~~~~~~~~~~~--~~~a~~l~~fl~~~t~~~ 172 (328)
+++++|+++++.+.|+. .....| ..+.+++.+.+++..+.+
T Consensus 112 ~v~~~P~~~lid~~G~i-----~~~~~G~~~~~~~~~~~~~~~~~~~~ 154 (158)
T 3hdc_A 112 GANRLPDTFIVDRKGII-----RQRVTGGIEWDAPKVVSYLKSLEGHH 154 (158)
T ss_dssp TCCSSSEEEEECTTSBE-----EEEEESCCCTTSHHHHHHHHTTC---
T ss_pred CCCCcceEEEEcCCCCE-----EEEEeCCCccchHHHHHHHHhhcccc
Confidence 99999999999766532 222234 346788999988887643
No 146
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.89 E-value=6.5e-09 Score=85.02 Aligned_cols=85 Identities=14% Similarity=0.221 Sum_probs=67.9
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHH---HHHHcccccCCCCcEEEEEEECcCChh---------------------
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTI---VANSFRYSQMYSNKLFFILVDFDEGSD--------------------- 121 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~---vA~s~~~~~~~~~~v~F~~vD~~~~~~--------------------- 121 (328)
+..+++.|||+ ||++|+...|.+++ +.+.+.. +++.+..++.+++++
T Consensus 31 gk~vll~F~a~----wC~~C~~~~~~l~~~~~l~~~~~~-----~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~ 101 (142)
T 3eur_A 31 AEYTLLFINNP----GCHACAEMIEGLKASPVINGFTAA-----KKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKEL 101 (142)
T ss_dssp CSEEEEEECCS----SSHHHHHHHHHHHHCHHHHHHHHT-----TSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTC
T ss_pred CCEEEEEEECC----CCccHHHHHHHHhhhHHHHHHhcc-----CCeEEEEEEcCCCHHHHHHHHHhcccccccccCccc
Confidence 45699999999 99999999999999 9988863 468888899887643
Q ss_pred ---hHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHh
Q psy8428 122 ---VFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIAD 167 (328)
Q Consensus 122 ---lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~ 167 (328)
+.+.|+++++|+++++.+.|+. .. ...+.+++.+||++
T Consensus 102 ~~~~~~~~~v~~~P~~~lid~~G~i-----~~---~~~~~~~l~~~l~e 142 (142)
T 3eur_A 102 VIKNKNLYDLRAIPTLYLLDKNKTV-----LL---KDATLQKVEQYLAE 142 (142)
T ss_dssp HHHHTTCSCCTTCSEEEEECTTCBE-----EE---EEECHHHHHHHHHC
T ss_pred hhhhhhhcCCCcCCeEEEECCCCcE-----Ee---cCCCHHHHHHHHhC
Confidence 4778999999999999776432 21 23457899998864
No 147
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.86 E-value=1.1e-08 Score=102.34 Aligned_cols=100 Identities=10% Similarity=0.080 Sum_probs=79.3
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 46 ~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
....+++++.++++. +...+ ..++.|||+ ||++|+.+.|.++++|..+ .++.|.++|.++++++.++
T Consensus 99 ~~~~~~~~~~~~~i~-~~~~~-~~i~~f~a~----~C~~C~~~~~~l~~~a~~~-------~~v~~~~vd~~~~~~~~~~ 165 (521)
T 1hyu_A 99 GHPSKEAQSLLEQIR-DIDGD-FEFETYYSL----SCHNCPDVVQALNLMAVLN-------PRIKHTAIDGGTFQNEITE 165 (521)
T ss_dssp TCCCCSCHHHHHHHH-HCCSC-EEEEEEECT----TCSSHHHHHHHHHHHHHHC-------TTEEEEEEETTTCHHHHHH
T ss_pred CCCCCCCHHHHHHHH-hcCCC-cceEEEECC----CCcCcHHHHHHHHHHHhHc-------CceEEEEEechhhHHHHHH
Confidence 335688998888774 33223 468889999 9999999999999999876 2699999999999999999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhh
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~ 168 (328)
++++++|++++ +| + ... .|..+.+++.+|+.+.
T Consensus 166 ~~i~svPt~~i--~g-~-----~~~--~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 166 RNVMGVPAVFV--NG-K-----EFG--QGRMTLTEIVAKVDTG 198 (521)
T ss_dssp TTCCSSSEEEE--TT-E-----EEE--ESCCCHHHHHHHHCCS
T ss_pred hCCCccCEEEE--CC-E-----EEe--cCCCCHHHHHHHHhhc
Confidence 99999999977 33 1 222 3566788888888654
No 148
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.86 E-value=8.2e-10 Score=102.87 Aligned_cols=76 Identities=12% Similarity=0.047 Sum_probs=57.1
Q ss_pred EEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC-cCChhhHHHcCCCcCceEEEecCCCCCCCCC
Q psy8428 69 AIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF-DEGSDVFQMLRLNTAPIFMHFPAKGKPKPSD 147 (328)
Q Consensus 69 vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~-~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~ 147 (328)
.+|+|+|+ ||++|++++|+|+++|+.+ +.+.+.++|. +++++++++++++++||+++ +| +
T Consensus 200 ~vV~F~A~----WC~~Ck~l~p~le~lA~~l-------~~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G------~ 260 (291)
T 3kp9_A 200 GGTMYGAY----WCPHCQDQKELFGAAFDQV-------PYVECSPNGPGTPQAQECTEAGITSYPTWII--NG------R 260 (291)
T ss_dssp TCEEEECT----TCHHHHHHHHHHGGGGGGS-------CEEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TT------E
T ss_pred CEEEEECC----CCHHHHHHHHHHHHHHHHc-------CEEEEeecCchhhHHHHHHHcCCcccCeEEE--CC------E
Confidence 36899999 9999999999999998654 1122222222 33899999999999999655 43 1
Q ss_pred ceeeeecccCHHHHHHHHH
Q psy8428 148 TLDIQRVGYSAEAIVKWIA 166 (328)
Q Consensus 148 ~~~~~~~~~~a~~l~~fl~ 166 (328)
. ..|.++.+++.+|++
T Consensus 261 ~---~~G~~~~~~L~~~l~ 276 (291)
T 3kp9_A 261 T---YTGVRSLEALAVASG 276 (291)
T ss_dssp E---EESCCCHHHHHHHTC
T ss_pred E---ecCCCCHHHHHHHHC
Confidence 2 257889999999984
No 149
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.85 E-value=2.2e-08 Score=83.85 Aligned_cols=88 Identities=16% Similarity=0.217 Sum_probs=71.5
Q ss_pred CCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc------------------CCh------
Q psy8428 65 RNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD------------------EGS------ 120 (328)
Q Consensus 65 r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~------------------~~~------ 120 (328)
++..++|.||++ ||++|+...|+++++++.+. ++.|..++++ +++
T Consensus 36 ~gk~~lv~F~~~----~C~~C~~~~~~l~~l~~~~~-------~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (165)
T 3ha9_A 36 GGDVVILWFMAA----WCPSCVYMADLLDRLTEKYR-------EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKF 104 (165)
T ss_dssp CSSEEEEEEECT----TCTTHHHHHHHHHHHHHHCT-------TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHH
T ss_pred CCCEEEEEEECC----CCcchhhhHHHHHHHHHHcC-------CcEEEEEEecccccccccccccccCCCCCCHHHHHHH
Confidence 445799999999 99999999999999998873 5899999988 443
Q ss_pred ----------------hhHHHcCCCcCceEEEecCCCCCCCCCceeeeeccc-CHHHHHHHHHhhcC
Q psy8428 121 ----------------DVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGY-SAEAIVKWIADRTD 170 (328)
Q Consensus 121 ----------------~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~-~a~~l~~fl~~~t~ 170 (328)
++.++|+++++|+++++.+.|+. .. .+.. +.+++.+.|++.++
T Consensus 105 ~~~~~~~~~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i-----~~--~g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 105 IANYGDPSWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNV-----LY--AGTTPSLGELESVIKSVQG 164 (165)
T ss_dssp HHHHSCTTSEEEECCSHHHHHTTCCSSSEEEEEETTCCE-----EE--EEESCCHHHHHHHHHHC--
T ss_pred HHHcCCCCeeEEeChHHHHHHhCCCCceEEEEEcCCCcE-----EE--eCCCCCHHHHHHHHHHHhc
Confidence 78999999999999999766432 12 4666 89999999987653
No 150
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.83 E-value=1.9e-08 Score=85.87 Aligned_cols=95 Identities=13% Similarity=0.148 Sum_probs=72.5
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHccccc-CCCCcEEEEEEECcC-ChhhHHHc-----------------
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQ-MYSNKLFFILVDFDE-GSDVFQML----------------- 126 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~-~~~~~v~F~~vD~~~-~~~lf~~l----------------- 126 (328)
+..++|.||++ ||++|+...|+++++++.+...+ ...+++.|..+++++ +++..+++
T Consensus 59 gk~vlv~F~a~----~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 134 (183)
T 3lwa_A 59 NQVVILNAWGQ----WCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFM 134 (183)
T ss_dssp TSEEEEEEECT----TCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCG
T ss_pred CCEEEEEEECC----cCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcch
Confidence 45799999999 99999999999999999986421 112345999999998 77766666
Q ss_pred --------CCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 127 --------RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 127 --------~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
+++++|+.+++.+.|+. .....+..+.+++.++|++.+
T Consensus 135 ~~~~~~~~~v~~~P~~~lid~~G~i-----~~~~~g~~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 135 TAASLGGVPASVIPTTIVLDKQHRP-----AAVFLREVTSKDVLDVALPLV 180 (183)
T ss_dssp GGGGTTTCCTTCCSEEEEECTTSCE-----EEEECSCCCHHHHHHHHHHHH
T ss_pred HHHHhccCCCCCCCeEEEECCCCcE-----EEEEcCCCCHHHHHHHHHHHH
Confidence 78999988888766432 233346678999999998764
No 151
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.82 E-value=2.3e-08 Score=82.38 Aligned_cols=92 Identities=15% Similarity=0.192 Sum_probs=70.3
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC-----------------------hhh
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG-----------------------SDV 122 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~-----------------------~~l 122 (328)
+..+++.|+++ ||++|+...|.++++++.+.. .++.+..++++.+ .++
T Consensus 28 gk~vll~f~~~----~C~~C~~~~~~l~~~~~~~~~-----~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 98 (154)
T 3kcm_A 28 GQVVIVNFWAT----WCPPCREEIPSMMRLNAAMAG-----KPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRV 98 (154)
T ss_dssp TSEEEEEEECT----TCHHHHHHHHHHHHHHHHTTT-----SSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHH
T ss_pred CCEEEEEEECC----CCHHHHHHHHHHHHHHHHhcc-----CCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHH
Confidence 34689999999 999999999999999998862 3688999998875 348
Q ss_pred HHHcCCCcCceEEEecCCCCCCCCCceeeeecc--cCHHHHHHHHHhhcCC
Q psy8428 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVG--YSAEAIVKWIADRTDI 171 (328)
Q Consensus 123 f~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~--~~a~~l~~fl~~~t~~ 171 (328)
.++|+++++|+.+++.+.|+. .....+. .+.+++.++|++..+.
T Consensus 99 ~~~~~v~~~P~~~lid~~G~i-----~~~~~g~~~~~~~~l~~~l~~l~~~ 144 (154)
T 3kcm_A 99 GKLYGTTGVPETFVIDRHGVI-----LKKVVGAMEWDHPEVIAFLNNELSK 144 (154)
T ss_dssp HHHHTCCSBCEEEEECTTSBE-----EEEEESCCCTTSHHHHHHHHTC---
T ss_pred HHHhCCCCCCeEEEECCCCcE-----EEEEcCCCccccHHHHHHHHHHHHH
Confidence 899999999988888665432 2222343 3678999999887653
No 152
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.81 E-value=9.2e-09 Score=80.39 Aligned_cols=80 Identities=16% Similarity=0.290 Sum_probs=63.7
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc--CChhhHHHcCCCcCceEEEecCCCCC
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD--EGSDVFQMLRLNTAPIFMHFPAKGKP 143 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~--~~~~lf~~l~v~svP~l~~f~p~g~~ 143 (328)
+...+++||++ ||++|+.++|.+++++ .++.|.++|++ +++++.+++| +++|+++ ..|
T Consensus 15 ~~~~v~~f~~~----~C~~C~~~~~~L~~l~----------~~i~~~~vdi~~~~~~el~~~~g-~~vP~l~--~~g--- 74 (100)
T 1wjk_A 15 ALPVLTLFTKA----PCPLCDEAKEVLQPYK----------DRFILQEVDITLPENSTWYERYK-FDIPVFH--LNG--- 74 (100)
T ss_dssp CCCEEEEEECS----SCHHHHHHHHHTSTTS----------SSSEEEEEETTSSTTHHHHHHSS-SSCSEEE--ESS---
T ss_pred CCCEEEEEeCC----CCcchHHHHHHHHHhh----------hCCeEEEEECCCcchHHHHHHHC-CCCCEEE--ECC---
Confidence 44578999999 9999999999887654 23889999999 7899999999 9999874 343
Q ss_pred CCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 144 KPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 144 ~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
+.. ..++.+.+++.++|++...
T Consensus 75 ---~~~--~~~g~~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 75 ---QFL--MMHRVNTSKLEKQLRKLSG 96 (100)
T ss_dssp ---SEE--EESSCCHHHHHHHHHSSSC
T ss_pred ---EEE--EecCCCHHHHHHHHHHHHh
Confidence 112 2467899999999987653
No 153
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.79 E-value=1.9e-08 Score=85.19 Aligned_cols=68 Identities=18% Similarity=0.315 Sum_probs=58.6
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC------------------------hhh
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG------------------------SDV 122 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~------------------------~~l 122 (328)
..++|.|||+ ||++|++..|+++++++.+.. .+++.+..+++++. .++
T Consensus 49 k~vll~F~a~----wC~~C~~~~p~l~~l~~~~~~----~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 120 (165)
T 3s9f_A 49 KTVFFYFSAS----WCPPCRGFTPQLVEFYEKHHD----SKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEAL 120 (165)
T ss_dssp SEEEEEEECT----TCHHHHHHHHHHHHHHHHHTT----TTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHH
T ss_pred CEEEEEEECC----cChhHHHHHHHHHHHHHHhcc----CCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHH
Confidence 3689999999 999999999999999999862 13688888888876 689
Q ss_pred HHHcCCCcCceEEEecCC-CC
Q psy8428 123 FQMLRLNTAPIFMHFPAK-GK 142 (328)
Q Consensus 123 f~~l~v~svP~l~~f~p~-g~ 142 (328)
.++|+++++|+++++.+. |+
T Consensus 121 ~~~~~v~~~Pt~~lid~~~G~ 141 (165)
T 3s9f_A 121 TKKYSVESIPTLIGLNADTGD 141 (165)
T ss_dssp HHHTTCCSSSEEEEEETTTCC
T ss_pred HHHcCCCCCCEEEEEeCCCCE
Confidence 999999999999999875 54
No 154
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.78 E-value=3.2e-08 Score=89.40 Aligned_cols=96 Identities=11% Similarity=0.080 Sum_probs=71.6
Q ss_pred hHHHHHHcCCCCccEEEEEeeCCCCCC--CccchhhHHHHHHHHHHcccccCCCCc--EEEEEEECcCChhhHHHcCCCc
Q psy8428 55 KYKEYIKNGPRNYSAIVMFTALAPQRN--CHICVSASDEYTIVANSFRYSQMYSNK--LFFILVDFDEGSDVFQMLRLNT 130 (328)
Q Consensus 55 nf~~~v~~~~r~y~vvV~ftA~~~~~~--C~~C~~~~pef~~vA~s~~~~~~~~~~--v~F~~vD~~~~~~lf~~l~v~s 130 (328)
.+++++. .-+-+++|.|+++ | |++|++++|.++++|+.+.+ ..++ +.|+++|.+++++++++|||++
T Consensus 16 ql~~~~~--~~~~pv~v~~~~~----~~~c~~c~~~~~~l~ela~~~~~---~~~~~~v~~~~vd~d~~~~~~~~~gv~~ 86 (243)
T 2hls_A 16 ELRETLA--EMVNPVEVHVFLS----KSGCETCEDTLRLMKLFEEESPT---RNGGKLLKLNVYYRESDSDKFSEFKVER 86 (243)
T ss_dssp HHHHHHT--TCCSCEEEEEEEC----SSSCTTHHHHHHHHHHHHHHSCE---ETTEESEEEEEEETTTTHHHHHHTTCCS
T ss_pred HHHHHHH--hCCCCEEEEEEeC----CCCCCchHHHHHHHHHHHHhccC---CCCCceeEEEEecCCcCHHHHHhcCCCc
Confidence 4555542 2345688999999 8 99999999999999987521 0123 9999999999999999999999
Q ss_pred CceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhh
Q psy8428 131 APIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (328)
Q Consensus 131 vP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~ 168 (328)
+|++.+| ++ . ..| .|..+.+++.+|+.+.
T Consensus 87 ~Pt~~i~-~g--~---~~~---~G~~~~~~l~~fv~~~ 115 (243)
T 2hls_A 87 VPTVAFL-GG--E---VRW---TGIPAGEEIRALVEVI 115 (243)
T ss_dssp SSEEEET-TT--T---EEE---ESCCCTTHHHHHHHHH
T ss_pred CCEEEEE-CC--c---eeE---cCCCcHHHHHHHHHHH
Confidence 9999999 33 1 233 2444556677776654
No 155
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.78 E-value=1.9e-08 Score=82.23 Aligned_cols=68 Identities=12% Similarity=0.195 Sum_probs=57.4
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC------------------------hh
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG------------------------SD 121 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~------------------------~~ 121 (328)
+..++|.|+|+ ||++|+...|.++++++.+.. ++++.+..++++++ .+
T Consensus 28 gk~vll~F~a~----wC~~C~~~~~~l~~l~~~~~~----~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 99 (144)
T 1i5g_A 28 GKTVFFYFSAS----WCPPSRAFTPQLIDFYKAHAE----KKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEF 99 (144)
T ss_dssp TSEEEEEEECT----TCHHHHHHHHHHHHHHHHHTT----TTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHH
T ss_pred CCEEEEEEECC----CCHHHHHHHHHHHHHHHHhcc----CCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHH
Confidence 34699999999 999999999999999998852 13688888888763 57
Q ss_pred hHHHcCCCcCceEEEec-CCC
Q psy8428 122 VFQMLRLNTAPIFMHFP-AKG 141 (328)
Q Consensus 122 lf~~l~v~svP~l~~f~-p~g 141 (328)
+.++|+++++|+++++. +.|
T Consensus 100 ~~~~~~v~~~P~~~lid~~~G 120 (144)
T 1i5g_A 100 LTTGFDVKSIPTLVGVEADSG 120 (144)
T ss_dssp HHHHTTCCSSSEEEEEETTTC
T ss_pred HHHHcCCCCCCEEEEEECCCC
Confidence 89999999999999997 554
No 156
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.77 E-value=2e-08 Score=82.45 Aligned_cols=68 Identities=13% Similarity=0.251 Sum_probs=57.1
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC------------------------hh
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG------------------------SD 121 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~------------------------~~ 121 (328)
+..++|.|+|+ ||++|+...|.++++++.+.. .+++.+..++++++ .+
T Consensus 28 gk~vll~F~a~----wC~~C~~~~p~l~~l~~~~~~----~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 99 (146)
T 1o8x_A 28 GKLVFFYFSAS----WCPPARGFTPQLIEFYDKFHE----SKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQK 99 (146)
T ss_dssp TCEEEEEEECT----TCHHHHHHHHHHHHHHHHHTT----TTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHH
T ss_pred CCEEEEEEEcc----CCHHHHHHHHHHHHHHHHhhh----cCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHH
Confidence 34689999999 999999999999999998852 13688888888763 57
Q ss_pred hHHHcCCCcCceEEEec-CCC
Q psy8428 122 VFQMLRLNTAPIFMHFP-AKG 141 (328)
Q Consensus 122 lf~~l~v~svP~l~~f~-p~g 141 (328)
+.++|+++++|+++++. ++|
T Consensus 100 ~~~~~~v~~~Pt~~lid~~~G 120 (146)
T 1o8x_A 100 LSKHFNVESIPTLIGVDADSG 120 (146)
T ss_dssp HHHHTTCCSSSEEEEEETTTC
T ss_pred HHHHhCCCCCCEEEEEECCCC
Confidence 89999999999999998 554
No 157
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.77 E-value=1.6e-08 Score=84.89 Aligned_cols=86 Identities=12% Similarity=0.046 Sum_probs=64.4
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEE-----------------------CcCChhh
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVD-----------------------FDEGSDV 122 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD-----------------------~~~~~~l 122 (328)
+..+++.||++ ||++|+...|+++++++. ++.+..+| .+++.++
T Consensus 51 gk~vll~F~a~----~C~~C~~~~~~l~~l~~~---------~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 117 (168)
T 2b1k_A 51 GKPVLLNVWAT----WCPTCRAEHQYLNQLSAQ---------GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGML 117 (168)
T ss_dssp SSCEEEEEECT----TCHHHHHHHHHHHHHHHT---------TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHH
T ss_pred CCEEEEEEECC----CCHHHHHHHHHHHHHHHC---------CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHH
Confidence 45689999999 999999999999998864 24455555 4556788
Q ss_pred HHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 123 f~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
.++|+++++|+.+++.+.|+ ......|..+.+++.++|++.+
T Consensus 118 ~~~~~v~~~P~~~lid~~G~-----i~~~~~g~~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 118 GLDLGVYGAPETFLIDGNGI-----IRYRHAGDLNPRVWEEEIKPLW 159 (168)
T ss_dssp HHHHTCCSSSEEEEECTTSB-----EEEEEESCCCHHHHHHTTHHHH
T ss_pred HHHcCccccCEEEEECCCCe-----EEEEEeCCCCHHHHHHHHHHHH
Confidence 99999999997777765543 2233346678888888887654
No 158
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.75 E-value=2.5e-08 Score=82.21 Aligned_cols=87 Identities=8% Similarity=0.076 Sum_probs=65.7
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc-----------------------CChhh
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-----------------------EGSDV 122 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~-----------------------~~~~l 122 (328)
+..+++.|+++ ||++|+...|.++++++. +++.|..+|++ .+.++
T Consensus 42 gk~~ll~f~~~----~C~~C~~~~~~l~~l~~~--------~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (156)
T 1kng_A 42 GKVSLVNVWAS----WCVPCHDEAPLLTELGKD--------KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRA 109 (156)
T ss_dssp TSCEEEEEECT----TCHHHHHHHHHHHHHTTC--------TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHH
T ss_pred CCEEEEEEEcc----cCHhHHHHHHHHHHHHhc--------CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHH
Confidence 34689999999 999999999999988754 24777777754 35578
Q ss_pred HHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 123 f~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
.++|+++++|+.+++.++|+ ......|..+.+++.+++++.+
T Consensus 110 ~~~~~v~~~P~~~~id~~G~-----i~~~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 110 SIEWGVYGVPETFVVGREGT-----IVYKLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp HHHTTCCSSCEEEEECTTSB-----EEEEEESCCCHHHHHHTHHHHH
T ss_pred HHhcCcCccCeEEEEcCCCC-----EEEEEeCCCCHHHHHHHHHHHH
Confidence 89999999998888865542 2233346678888888887754
No 159
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.75 E-value=2.4e-08 Score=81.48 Aligned_cols=67 Identities=15% Similarity=0.331 Sum_probs=56.5
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC------------------------hhh
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG------------------------SDV 122 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~------------------------~~l 122 (328)
..++|.|+|+ ||++|+...|.++++++.+.. ++++.+..++++++ .++
T Consensus 29 k~vll~F~a~----wC~~C~~~~~~l~~l~~~~~~----~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (144)
T 1o73_A 29 KTVFLYFSAS----WCPPCRGFTPVLAEFYEKHHV----AKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSEL 100 (144)
T ss_dssp CEEEEEEECT----TCHHHHHHHHHHHHHHHHHTT----TTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHH
T ss_pred CEEEEEEECc----CCHHHHHHHHHHHHHHHHhcc----CCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHH
Confidence 3689999999 999999999999999998852 13588888888763 478
Q ss_pred HHHcCCCcCceEEEec-CCC
Q psy8428 123 FQMLRLNTAPIFMHFP-AKG 141 (328)
Q Consensus 123 f~~l~v~svP~l~~f~-p~g 141 (328)
.++|+++++|+++++. +.|
T Consensus 101 ~~~~~v~~~Pt~~lid~~~G 120 (144)
T 1o73_A 101 GKTFGVESIPTLITINADTG 120 (144)
T ss_dssp HHHHTCCSSSEEEEEETTTC
T ss_pred HHHcCCCCCCEEEEEECCCC
Confidence 9999999999999998 554
No 160
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.73 E-value=4.5e-08 Score=80.04 Aligned_cols=86 Identities=12% Similarity=0.125 Sum_probs=66.5
Q ss_pred CCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCCh------------------------
Q psy8428 65 RNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS------------------------ 120 (328)
Q Consensus 65 r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~------------------------ 120 (328)
++..+++.|||+ ||++|+...|+++++.+.|.. +++.+..+++++++
T Consensus 31 ~gk~vll~F~a~----wC~~C~~~~~~l~~l~~~~~~-----~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 101 (143)
T 4fo5_A 31 LGRYTLLNFWAA----YDAESRARNVQLANEVNKFGP-----DKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGK 101 (143)
T ss_dssp SCCEEEEEEECT----TCHHHHHHHHHHHHHHTTSCT-----TTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGG
T ss_pred CCCEEEEEEEcC----cCHHHHHHHHHHHHHHHHhCc-----CCEEEEEEEccCCHHHHHHHHHHhCCCCceeeeccccc
Confidence 345789999999 999999999999999988852 35888888877532
Q ss_pred --hhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHh
Q psy8428 121 --DVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIAD 167 (328)
Q Consensus 121 --~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~ 167 (328)
++.+.|+++++|+.+++.+.|+. .. ...+.+++.+.+++
T Consensus 102 ~~~~~~~~~v~~~P~~~lid~~G~i-----~~---~~~~~~~l~~~l~~ 142 (143)
T 4fo5_A 102 ESELYKKYDLRKGFKNFLINDEGVI-----IA---ANVTPEKLTEILKA 142 (143)
T ss_dssp GSHHHHHTTGGGCCCEEEECTTSBE-----EE---ESCCHHHHHHHHTC
T ss_pred chHHHHHcCCCCCCcEEEECCCCEE-----EE---ccCCHHHHHHHHHh
Confidence 57789999999999999876432 21 23457778877754
No 161
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.72 E-value=1.2e-07 Score=78.14 Aligned_cols=87 Identities=15% Similarity=0.169 Sum_probs=69.4
Q ss_pred CccEEEEEeeCCCCCCCcc--chhhHHHHHHHHHHc-ccccCCCCcEEEEEEECcCCh----------------------
Q psy8428 66 NYSAIVMFTALAPQRNCHI--CVSASDEYTIVANSF-RYSQMYSNKLFFILVDFDEGS---------------------- 120 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~--C~~~~pef~~vA~s~-~~~~~~~~~v~F~~vD~~~~~---------------------- 120 (328)
+..++|.||++ ||++ |+...|+++++.+.| .. .++.|..+++++.+
T Consensus 33 gk~vll~F~a~----~C~~v~C~~~~~~l~~l~~~~~~~-----~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~ 103 (150)
T 3fw2_A 33 QKSLLINFWAS----WNDSISQKQSNSELREIYKKYKKN-----KYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGG 103 (150)
T ss_dssp TSEEEEEEECT----TCCCHHHHHHHHHHHHHHHHHTTC-----SSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCG
T ss_pred CCEEEEEEEeC----CCCchHHHHHHHHHHHHHHHhccC-----CCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcc
Confidence 34799999999 9999 999999999999998 42 35899999988765
Q ss_pred ---hhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 121 ---DVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 121 ---~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
++.+.|+++++|+.+++.+.|+. ... ..+.+++.+.|++.+
T Consensus 104 ~~~~~~~~~~v~~~P~~~lid~~G~i-----~~~---~~~~~~l~~~l~~ll 147 (150)
T 3fw2_A 104 LNSEVAKQYSIYKIPANILLSSDGKI-----LAK---NLRGEELKKKIENIV 147 (150)
T ss_dssp GGCHHHHHTTCCSSSEEEEECTTSBE-----EEE---SCCHHHHHHHHHHHH
T ss_pred cchHHHHHcCCCccCeEEEECCCCEE-----EEc---cCCHHHHHHHHHHHH
Confidence 78999999999999999765432 111 237788888887654
No 162
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.70 E-value=7.8e-08 Score=79.91 Aligned_cols=85 Identities=8% Similarity=0.089 Sum_probs=65.4
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChh-----------------------hH
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD-----------------------VF 123 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~-----------------------lf 123 (328)
..+++.|||+ ||++|+...|.++++++.+.. .++.+..+++++.++ +.
T Consensus 36 k~vll~F~a~----wC~~C~~~~~~l~~l~~~~~~-----~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 106 (152)
T 2lrt_A 36 KVVLIDFTVY----NNAMSAAHNLALRELYNKYAS-----QGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYI 106 (152)
T ss_dssp SEEEEEEECT----TCHHHHHHHHHHHHHHHHHGG-----GTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHH
T ss_pred CEEEEEEEcC----CChhhHHHHHHHHHHHHHhcc-----CCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHH
Confidence 3689999999 999999999999999999863 258999999987654 88
Q ss_pred HHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHH
Q psy8428 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWI 165 (328)
Q Consensus 124 ~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl 165 (328)
++|+++++|+.+++.+.|+. .....+..+.++...-+
T Consensus 107 ~~~~v~~~P~~~lid~~G~i-----~~~~~g~~~~e~~~~~~ 143 (152)
T 2lrt_A 107 SLYNVTNLPSVFLVNRNNEL-----SARGENIKDLDEAIKKL 143 (152)
T ss_dssp HHHTCCSCSEEEEEETTTEE-----EEETTTCSCHHHHHHHH
T ss_pred HHcCcccCceEEEECCCCeE-----EEecCCHHHHHHHHHHH
Confidence 99999999999999766432 22223455555544433
No 163
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.16 E-value=1.7e-09 Score=88.01 Aligned_cols=69 Identities=17% Similarity=0.177 Sum_probs=55.7
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC-------------------------hhh
Q psy8428 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG-------------------------SDV 122 (328)
Q Consensus 68 ~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~-------------------------~~l 122 (328)
.+++.|+|+ ||++|+...|.++++++.+... .+++.+..++++++ .++
T Consensus 28 ~vll~F~a~----wC~~C~~~~~~l~~~~~~~~~~---~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (143)
T 2lus_A 28 IIGFYFSAH----WCPPCRGFTPILADMYSELVDD---SAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNV 100 (143)
Confidence 689999999 9999999999999999887421 13466666766654 478
Q ss_pred HHHcCCCcCceEEEecCCCCC
Q psy8428 123 FQMLRLNTAPIFMHFPAKGKP 143 (328)
Q Consensus 123 f~~l~v~svP~l~~f~p~g~~ 143 (328)
.++|+++++|+++++.+.|+.
T Consensus 101 ~~~~~v~~~P~~~lid~~G~i 121 (143)
T 2lus_A 101 TAKYGITGIPALVIVKKDGTL 121 (143)
Confidence 999999999999999876543
No 164
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.69 E-value=6.6e-09 Score=77.30 Aligned_cols=58 Identities=14% Similarity=0.255 Sum_probs=47.3
Q ss_pred EEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc-CChhhHHHcCCCcCceEEE
Q psy8428 69 AIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-EGSDVFQMLRLNTAPIFMH 136 (328)
Q Consensus 69 vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~-~~~~lf~~l~v~svP~l~~ 136 (328)
-+++||++ ||++|+.++|.++++++++. .++.+..+|.+ +++++.+++|++++|++++
T Consensus 3 ~~~~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i 61 (80)
T 2k8s_A 3 SKAIFYHA----GCPVCVSAEQAVANAIDPSK------YTVEIVHLGTDKARIAEAEKAGVKSVPALVI 61 (80)
T ss_dssp EEEEEEEC----SCHHHHHHHHHHHHHSCTTT------EEEEEEETTTCSSTHHHHHHHTCCEEEEEEE
T ss_pred ceEEEeCC----CCCchHHHHHHHHHHHHhcC------CeEEEEEecCChhhHHHHHHcCCCcCCEEEE
Confidence 46789999 99999999999999886652 24556666655 5788999999999999987
No 165
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.65 E-value=9.5e-08 Score=80.71 Aligned_cols=102 Identities=14% Similarity=0.187 Sum_probs=76.3
Q ss_pred hhhHHHHHHc-CCCCccEEEEEeeCCCCCCCccchhhHHHH---HHHHHHcccccCCCCcEEEEEEECcC--ChhhHHHc
Q psy8428 53 GQKYKEYIKN-GPRNYSAIVMFTALAPQRNCHICVSASDEY---TIVANSFRYSQMYSNKLFFILVDFDE--GSDVFQML 126 (328)
Q Consensus 53 ~~nf~~~v~~-~~r~y~vvV~ftA~~~~~~C~~C~~~~pef---~~vA~s~~~~~~~~~~v~F~~vD~~~--~~~lf~~l 126 (328)
..+|++.+.. ..++.+++|+|+++ ||..|+.|+.+. .+|++... ++..+.++|.++ +.++.++|
T Consensus 28 ~~~~~~Al~~Ak~~~K~vlvd~~a~----wC~~C~~me~~vf~d~~V~~~l~------~~fv~v~~d~~~~~~~~l~~~y 97 (153)
T 2dlx_A 28 KGSFETAKECGQMQNKWLMINIQNV----QDFACQCLNRDVWSNEAVKNIIR------EHFIFWQVYHDSEEGQRYIQFY 97 (153)
T ss_dssp CSCHHHHHHHHHHHTCEEEEEEECS----CTTTHHHHHHHTTTCHHHHHHHH------HTEEEEEEESSSHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHcCCeEEEEEECC----CCHhHHHHHHHhcCCHHHHHHHH------cCeEEEEEecCCHhHHHHHHHc
Confidence 3567776521 22356799999999 999999998765 56665543 358999999976 56789999
Q ss_pred CCCcCceEEEecCC-CCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 127 RLNTAPIFMHFPAK-GKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 127 ~v~svP~l~~f~p~-g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
++.+.|+++++.|. |+. +... ++.+++++.++|++.+.
T Consensus 98 ~v~~~P~~~fld~~~G~~-----l~~~-~g~~~~~fl~~L~~~l~ 136 (153)
T 2dlx_A 98 KLGDFPYVSILDPRTGQK-----LVEW-HQLDVSSFLDQVTGFLG 136 (153)
T ss_dssp TCCSSSEEEEECTTTCCC-----CEEE-SSCCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEeCCCCcE-----eeec-CCCCHHHHHHHHHHHHH
Confidence 99999999999875 422 2222 45899999998887654
No 166
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.65 E-value=7.1e-08 Score=82.99 Aligned_cols=91 Identities=16% Similarity=0.233 Sum_probs=70.6
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc-----------------------------
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD----------------------------- 117 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~----------------------------- 117 (328)
..++|.||++ ||++|+...|+++++++.+.. +++.|..++++
T Consensus 47 ~~vlv~F~a~----~C~~C~~~~~~l~~l~~~~~~-----~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d 117 (196)
T 2ywi_A 47 AATVIMFICN----HCPFVKHVQHELVRLANDYMP-----KGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYD 117 (196)
T ss_dssp SEEEEEECCS----SCHHHHHHHHHHHHHHHHHGG-----GTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEEC
T ss_pred CeEEEEEeCC----CCccHHHHHHHHHHHHHHHHh-----CCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEEC
Confidence 3589999999 999999999999999998863 24888888873
Q ss_pred CChhhHHHcCCCcCceEEEecCCCCCCCCCceee--------eecccCHHHHHHHHHhhcC
Q psy8428 118 EGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDI--------QRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 118 ~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~--------~~~~~~a~~l~~fl~~~t~ 170 (328)
.+.++.++|++.++|+++++.+.|+.. +.. ..+..+.+++.+.|++.+.
T Consensus 118 ~~~~~~~~~~v~~~P~~~lid~~G~i~----~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 118 ETQEVAKAYDAACTPDFYIFDRDLKCV----YRGQLDDSRPNNGIPVTGESIRAALDALLE 174 (196)
T ss_dssp SSCHHHHHHTCCEESEEEEEETTCBEE----EEECSSSCCTTTCCCCCCHHHHHHHHHHHH
T ss_pred CchHHHHHhCCCCCCeEEEEcCCCeEE----EccccCcccccccCccCHHHHHHHHHHHHc
Confidence 456789999999999999997664321 110 1244577889888887654
No 167
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.62 E-value=2.8e-07 Score=78.62 Aligned_cols=91 Identities=13% Similarity=0.143 Sum_probs=69.5
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC-----hhhHHHcCCC-----------
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG-----SDVFQMLRLN----------- 129 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~-----~~lf~~l~v~----------- 129 (328)
+..+++.||++ ||++|+...|+++++.+.+.. +++.+..++.+.. .+..++++++
T Consensus 60 gk~vll~F~a~----~C~~C~~~~~~l~~l~~~~~~-----~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 130 (186)
T 1jfu_A 60 GKTLLVNLWAT----WCVPCRKEMPALDELQGKLSG-----PNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAK 130 (186)
T ss_dssp TSEEEEEEECT----TCHHHHHHHHHHHHHHHHHCB-----TTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCH
T ss_pred CCEEEEEEEeC----CCHhHHHHHHHHHHHHHHhcc-----CCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcch
Confidence 44689999999 999999999999999998852 4688888888764 5667778875
Q ss_pred ------------cCceEEEecCCCCCCCCCceeeeeccc--CHHHHHHHHHhhcC
Q psy8428 130 ------------TAPIFMHFPAKGKPKPSDTLDIQRVGY--SAEAIVKWIADRTD 170 (328)
Q Consensus 130 ------------svP~l~~f~p~g~~~~~~~~~~~~~~~--~a~~l~~fl~~~t~ 170 (328)
++|+++++.+.|+. .....|.. +.+++.++|++.++
T Consensus 131 ~~~~~~~~~~~~~~P~~~lid~~G~i-----~~~~~g~~~~~~~~l~~~l~~ll~ 180 (186)
T 1jfu_A 131 VFQDLKAIGRALGMPTSVLVDPQGCE-----IATIAGPAEWASEDALKLIRAATG 180 (186)
T ss_dssp HHHHHHTTTCCSSSSEEEEECTTSBE-----EEEEESCCCTTSHHHHHHHHHHHC
T ss_pred HHHHhccccccCCCCEEEEECCCCCE-----EEEEecCCccCHHHHHHHHHHHhc
Confidence 89999999766432 22223433 47889999988765
No 168
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.61 E-value=1.5e-07 Score=80.50 Aligned_cols=95 Identities=15% Similarity=0.183 Sum_probs=69.7
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC-----------------------------
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF----------------------------- 116 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~----------------------------- 116 (328)
+..++|.|+|+ ||++|+...|+++++++.+.. + +.+..++.
T Consensus 33 gk~vlv~F~a~----~C~~C~~~~~~l~~l~~~~~~-----~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 102 (188)
T 2cvb_A 33 EPLLAVVFMCN----HCPYVKGSIGELVALAERYRG-----K-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLL 102 (188)
T ss_dssp SSEEEEEEECS----SCHHHHTTHHHHHHHHHHTTT-----T-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEE
T ss_pred CCEEEEEEECC----CCccHHHHHHHHHHHHHHhhc-----C-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEE
Confidence 45789999999 999999999999999998852 3 88888888
Q ss_pred cCChhhHHHcCCCcCceEEEecCCCCCCCCCcee---eeecccCHHHHHHHHHhhcC
Q psy8428 117 DEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLD---IQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 117 ~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~---~~~~~~~a~~l~~fl~~~t~ 170 (328)
+.+.++.+.|++.++|+++++.+.|+.......+ ...+..+.+++.+.|++.+.
T Consensus 103 d~~~~~~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~ 159 (188)
T 2cvb_A 103 DETQEVAKAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLR 159 (188)
T ss_dssp CSSSHHHHHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHT
T ss_pred CCcchHHHHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHc
Confidence 3456789999999999999997654321000000 00122367888888887765
No 169
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.59 E-value=2e-07 Score=89.08 Aligned_cols=92 Identities=15% Similarity=0.092 Sum_probs=72.5
Q ss_pred CCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc---------------------------
Q psy8428 65 RNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD--------------------------- 117 (328)
Q Consensus 65 r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~--------------------------- 117 (328)
++..++|.||++ ||++|+...|.++++++.+.. +++.+..++++
T Consensus 81 ~GK~vLl~F~at----wC~~C~~~~p~L~~l~~~~~~-----~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D 151 (352)
T 2hyx_A 81 RGKVVLIDFWAY----SCINCQRAIPHVVGWYQAYKD-----SGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALD 151 (352)
T ss_dssp TTSEEEEEEECT----TCHHHHHHHHHHHHHHHHHGG-----GTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEEC
T ss_pred CCCEEEEEEECC----CChhHHHHHHHHHHHHHHhhc-----CCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeC
Confidence 345799999999 999999999999999999863 35888888764
Q ss_pred CChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 118 EGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 118 ~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
.+.++.++|+++++|+++++.+.|+ ......+..+.+++.++|++.+.
T Consensus 152 ~~~~l~~~ygV~~~Pt~~lID~~G~-----Iv~~~~G~~~~~~l~~~I~~lL~ 199 (352)
T 2hyx_A 152 NNYATWTNYRNRYWPAEYLIDATGT-----VRHIKFGEGDYNVTETLVRQLLN 199 (352)
T ss_dssp TTSHHHHHTTCCEESEEEEECTTSB-----EEEEEESBCCHHHHHHHHHHHHH
T ss_pred CcHHHHHHcCCCccCEEEEEeCCCe-----EEEEEcCCCCHHHHHHHHHHHHh
Confidence 3467899999999999999966543 22333466778888888877653
No 170
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.58 E-value=3.2e-08 Score=78.22 Aligned_cols=78 Identities=18% Similarity=0.196 Sum_probs=53.2
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC-----hhhHHHcCCCcCceEEEecCCCC
Q psy8428 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG-----SDVFQMLRLNTAPIFMHFPAKGK 142 (328)
Q Consensus 68 ~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~-----~~lf~~l~v~svP~l~~f~p~g~ 142 (328)
.+++ ||++ ||++|+.+.|.+++++.. +.+..+|.+++ +++.+++|++++|++ |..| +
T Consensus 21 ~vv~-f~a~----~C~~C~~~~~~l~~~~~~----------~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g-~ 82 (116)
T 2e7p_A 21 PVVV-FSKT----YCGYCNRVKQLLTQVGAS----------YKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGG-K 82 (116)
T ss_dssp SEEE-EECT----TCHHHHHHHHHHHHHTCC----------CEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETT-E
T ss_pred CEEE-EECC----CChhHHHHHHHHHHcCCC----------eEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECC-E
Confidence 3555 9999 999999999999987532 34555555554 568999999999999 4444 1
Q ss_pred CCCCCceeeeeccc---CHHHHHHHHHhh
Q psy8428 143 PKPSDTLDIQRVGY---SAEAIVKWIADR 168 (328)
Q Consensus 143 ~~~~~~~~~~~~~~---~a~~l~~fl~~~ 168 (328)
......+.. +.+++.+||++.
T Consensus 83 -----~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 83 -----QIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp -----EEECHHHHHHHHHTTCHHHHHHHT
T ss_pred -----EECChHHHHHHHhCChHHHHHHHc
Confidence 121111222 556788888764
No 171
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.57 E-value=2e-07 Score=79.45 Aligned_cols=87 Identities=15% Similarity=0.069 Sum_probs=65.5
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC-----------------------cCChhh
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF-----------------------DEGSDV 122 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~-----------------------~~~~~l 122 (328)
+..++|.||++ ||++|+...|+++++++. ++.+..+++ +.+.++
T Consensus 58 gk~vll~F~a~----~C~~C~~~~~~l~~l~~~---------~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~ 124 (176)
T 3kh7_A 58 GKPALVNVWGT----WCPSCRVEHPELTRLAEQ---------GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTL 124 (176)
T ss_dssp SSCEEEEEECT----TCHHHHHHHHHHHHHHHT---------TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHH
T ss_pred CCEEEEEEECC----cCHHHHHHHHHHHHHHHC---------CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchH
Confidence 34689999999 999999999999998764 255555553 345678
Q ss_pred HHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 123 f~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
.++|++.++|+.+++.+.|+. .....+..+.+++.++|.+.+.
T Consensus 125 ~~~~~v~~~P~~~lid~~G~i-----~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 125 GLDLGVYGAPETYLIDKQGII-----RHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp HHHHTCCSSCEEEEECTTCBE-----EEEEESCCCHHHHHHHTHHHHH
T ss_pred HHHcCCCCCCeEEEECCCCeE-----EEEEcCCCCHHHHHHHHHHHHH
Confidence 899999999999998766432 2333466788888888876653
No 172
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.52 E-value=7.7e-08 Score=71.65 Aligned_cols=75 Identities=21% Similarity=0.393 Sum_probs=58.6
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCCh----hhHHHcC--CCcCceEEEecCCCCC
Q psy8428 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS----DVFQMLR--LNTAPIFMHFPAKGKP 143 (328)
Q Consensus 70 vV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~----~lf~~l~--v~svP~l~~f~p~g~~ 143 (328)
+++|+++ ||++|+.++|.++++++.+. ++.|..+|+++++ ++.+++| ++++|+++ -.| +
T Consensus 3 v~~f~~~----~C~~C~~~~~~l~~l~~~~~-------~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~--~~g-~- 67 (85)
T 1ego_A 3 TVIFGRS----GCPYCVRAKDLAEKLSNERD-------DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQIF--VDQ-Q- 67 (85)
T ss_dssp EEEECCT----TSTHHHHHHHHHHHHHHHHS-------SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEE--ETT-E-
T ss_pred EEEEeCC----CCCCHHHHHHHHHHHHhcCC-------CceEEEEecccChHHHHHHHHHhCCCCceeCeEE--ECC-E-
Confidence 6779999 99999999999999998753 4889999998754 8899999 99999984 333 1
Q ss_pred CCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 144 KPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 144 ~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
.+ ++ .+++.+++++..
T Consensus 68 ----~i----~~--~~~l~~~~~~~~ 83 (85)
T 1ego_A 68 ----HI----GG--YTDFAAWVKENL 83 (85)
T ss_dssp ----EE----ES--SHHHHHHHHHHH
T ss_pred ----EE----EC--HHHHHHHHHHhc
Confidence 11 22 367888887653
No 173
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.88 E-value=1.6e-08 Score=84.23 Aligned_cols=90 Identities=14% Similarity=0.132 Sum_probs=62.6
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHH-HHHHcccccCCCCcEEEEEEECcCChhhHHHcC-----------------
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTI-VANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR----------------- 127 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~-vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~----------------- 127 (328)
+..+++.|||+ ||++|+...|.+++ +.+.+.. .+++.+..+|++++++..+++.
T Consensus 33 gk~vll~f~a~----~C~~C~~~~~~l~~~l~~~~~~----~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~ 104 (159)
T 2ls5_A 33 GKVVMLQFTAS----WCGVCRKEMPFIEKDIWLKHKD----NADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADI 104 (159)
Confidence 34689999999 99999999999998 8877641 2458888888887655444444
Q ss_pred -------CCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 128 -------LNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 128 -------v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
+.++|+++++.+.|+.. ... .+.+.+++.+++++..
T Consensus 105 ~~~~~~~~~~~P~~~lid~~G~i~-----~~~-~g~~~~~l~~~l~~l~ 147 (159)
T 2ls5_A 105 FAKYALRDAGITRNVLIDREGKIV-----KLT-RLYNEEEFASLVQQIN 147 (159)
Confidence 67799999996655431 111 2345566666665543
No 174
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.47 E-value=7.5e-07 Score=77.07 Aligned_cols=99 Identities=8% Similarity=0.129 Sum_probs=69.7
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC-------------------------Ch
Q psy8428 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------------------------GS 120 (328)
Q Consensus 67 y~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~-------------------------~~ 120 (328)
..+++.|| ++ ||++|+...|+++++++.+.. .++.+..++.+. +.
T Consensus 46 k~vvl~F~~a~----~C~~C~~~~~~l~~l~~~~~~-----~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 116 (195)
T 2bmx_A 46 KWRVVFFWPKD----FTFVCPTEIAAFSKLNDEFED-----RDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKR 116 (195)
T ss_dssp CEEEEEECSCT----TSCCCHHHHHHHHHTHHHHHT-----TTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTS
T ss_pred CcEEEEEEcCC----CCCCcHHHHHHHHHHHHHHHH-----CCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCch
Confidence 46899999 99 999999999999999998863 357777777763 45
Q ss_pred hhHHHcCCC-----cCceEEEecCCCCCCCCCceeeeecc----cCHHHHHHHHHhhcCCcceeeCCCCCc
Q psy8428 121 DVFQMLRLN-----TAPIFMHFPAKGKPKPSDTLDIQRVG----YSAEAIVKWIADRTDIQIRVFRPPNYS 182 (328)
Q Consensus 121 ~lf~~l~v~-----svP~l~~f~p~g~~~~~~~~~~~~~~----~~a~~l~~fl~~~t~~~i~i~~p~~~~ 182 (328)
++.+.|++. ++|+++++.+.|+. .....+. .+.+++.+.|++... ....|.+|.
T Consensus 117 ~~~~~~~v~~~~g~~~P~~~lid~~G~i-----~~~~~g~~~~~~~~~~l~~~l~~l~~---~~~~p~~w~ 179 (195)
T 2bmx_A 117 ELSQAAGVLNADGVADRVTFIVDPNNEI-----QFVSATAGSVGRNVDEVLRVLDALQS---DELCASNWR 179 (195)
T ss_dssp HHHHHHTCBCTTSSBCEEEEEECTTSBE-----EEEEEECTTCCCCHHHHHHHHHHHHC------------
T ss_pred HHHHHhCCcccCCCccceEEEEcCCCeE-----EEEEecCCCCCCCHHHHHHHHHHHhh---CCCcCcccc
Confidence 688899999 99999999766532 1222232 368999999988764 223355663
No 175
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.47 E-value=2.4e-07 Score=81.93 Aligned_cols=90 Identities=10% Similarity=0.150 Sum_probs=70.1
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc-----------------------------C
Q psy8428 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-----------------------------E 118 (328)
Q Consensus 68 ~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~-----------------------------~ 118 (328)
.++|.||++ ||++|+...|.++++++.+.. .++.|..++.+ .
T Consensus 61 ~vll~F~a~----~C~~C~~~~~~l~~l~~~~~~-----~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~ 131 (218)
T 3u5r_E 61 ALLVAFISN----RCPFVVLIREALAKFAGDYAG-----QGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDA 131 (218)
T ss_dssp EEEEEECCS----SCHHHHTTHHHHHHHHHHHTT-----TTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECT
T ss_pred eEEEEEECC----CCccHHHHHHHHHHHHHHHHh-----CCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECC
Confidence 589999999 999999999999999999862 34889999884 4
Q ss_pred ChhhHHHcCCCcCceEEEecCCCCCCCCCceee--------eecccCHHHHHHHHHhhcC
Q psy8428 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDI--------QRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 119 ~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~--------~~~~~~a~~l~~fl~~~t~ 170 (328)
+.++.+.|++.++|+++++.+.|+.. +.. ..+..+.+++.+.|++.+.
T Consensus 132 ~~~~~~~~~v~~~P~~~liD~~G~i~----~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~ 187 (218)
T 3u5r_E 132 SQSVAKAYGAACTPDFFLYDRERRLV----YHGQFDDARPGNGKDVTGADLRAAVDAVLK 187 (218)
T ss_dssp TCHHHHHHTCCEESEEEEECTTCBEE----EEECSSSCCTTSCCCCCCHHHHHHHHHHHT
T ss_pred ccHHHHHcCCCCCCeEEEECCCCcEE----EeccccccccccccccCHHHHHHHHHHHHc
Confidence 57899999999999999997665321 110 0123457888888888664
No 176
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.45 E-value=8.8e-07 Score=73.50 Aligned_cols=94 Identities=17% Similarity=0.209 Sum_probs=69.7
Q ss_pred ccEEEEEeeCCCCCCCcc-chhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC--------------------------
Q psy8428 67 YSAIVMFTALAPQRNCHI-CVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG-------------------------- 119 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~-C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~-------------------------- 119 (328)
..+++.|+++ ||++ |+...|.++++.+.+....+ .+++.+..+++|..
T Consensus 24 k~vll~f~~~----~C~~~C~~~~~~l~~l~~~~~~~~~-~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d 98 (164)
T 2ggt_A 24 QWLLIYFGFT----HCPDVCPEELEKMIQVVDEIDSITT-LPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTRE 98 (164)
T ss_dssp CEEEEEEECT----TCSSHHHHHHHHHHHHHHHHHHSSS-SCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHH
T ss_pred CEEEEEEEeC----CCCchhHHHHHHHHHHHHHHhhccC-CCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHH
Confidence 4689999999 9998 99999999999998863211 13577777777642
Q ss_pred --hhhHHHcCCCcCc---------------eEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 120 --SDVFQMLRLNTAP---------------IFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 120 --~~lf~~l~v~svP---------------~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
.++.+.||+...| +.+++.+.|+. .....+..+.+++.+.|++.+.
T Consensus 99 ~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i-----~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 99 EVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEF-----LDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCE-----EEEEETTCCHHHHHHHHHHHHG
T ss_pred HHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeE-----EEEeCCCCCHHHHHHHHHHHHH
Confidence 2478899999999 77777766532 2333466788999999887653
No 177
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.43 E-value=2.1e-06 Score=81.12 Aligned_cols=127 Identities=15% Similarity=0.123 Sum_probs=94.9
Q ss_pred chHHHHHHHHhhhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEE
Q psy8428 31 SLGDRVLHLSEMNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLF 110 (328)
Q Consensus 31 ~~~~~~~~L~~l~~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~ 110 (328)
...+.+.+..+.....-|.++|.+|+.++. +++.+...++.|..+ +|+.|.++.++++++|+.+.. ++++.
T Consensus 211 ~~~~~l~~fi~~~~~p~v~elt~~~~~~~~-~~~~~~~~~l~f~~~----~~~~~~~~~~~~~~vA~~~~~----~~~~~ 281 (350)
T 1sji_A 211 YTEEELVEFVKEHQRPTLRRLRPEDMFETW-EDDLNGIHIVAFAER----SDPDGYEFLEILKQVARDNTD----NPDLS 281 (350)
T ss_dssp CCHHHHHHHHHHHCCCSEEECCTTTHHHHH-HSCSSSEEEEEECCT----TSHHHHHHHHHHHHHHHHGGG----CSSCC
T ss_pred CCHHHHHHHHHHcCccchhhcChhhHHHHh-cCCCCCcEEEEEEcC----CCccHHHHHHHHHHHHHHhCC----CCceE
Confidence 445666666654444569999999999976 444322234558887 999999999999999999862 13699
Q ss_pred EEEEECcCChhhH----HHcCCC-cCceEEEecCCCCCCCCCcee--ee--ecccCHHHHHHHHHhhcC
Q psy8428 111 FILVDFDEGSDVF----QMLRLN-TAPIFMHFPAKGKPKPSDTLD--IQ--RVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 111 F~~vD~~~~~~lf----~~l~v~-svP~l~~f~p~g~~~~~~~~~--~~--~~~~~a~~l~~fl~~~t~ 170 (328)
|+.+|.++.+... +.+|++ +.|++.++.+.. .+.|. +. .+..+++.+.+|+++...
T Consensus 282 f~~id~~~~~~~~~~~~~~~gi~~~~P~~~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~F~~d~~~ 346 (350)
T 1sji_A 282 IVWIDPDDFPLLVAYWEKTFKIDLFKPQIGVVNVTD----ADSVWMEIPDDDDLPTAEELEDWIEDVLS 346 (350)
T ss_dssp EEEECGGGCHHHHHHHHHHCCSCTTSCEEEEEESSS----SCEEESCSSCCSCCCCHHHHHHHHHHHHT
T ss_pred EEEECchhhHHHHHHHHhhcCCCccCCcEEEEeccc----ccccccCCCcccccCCHHHHHHHHHHHhc
Confidence 9999999988887 789998 589999998741 12343 22 236789999999998764
No 178
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.40 E-value=1.8e-06 Score=72.17 Aligned_cols=95 Identities=13% Similarity=0.114 Sum_probs=70.2
Q ss_pred CccEEEEEeeCCCCCCCcc-chhhHHHHHHHHHHcccccCCCCcEEEEEEECcC---C----------------------
Q psy8428 66 NYSAIVMFTALAPQRNCHI-CVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE---G---------------------- 119 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~-C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~---~---------------------- 119 (328)
+..++|.|+++ ||++ |+...|.++++.+.+.+. +..+++.+..+++|. .
T Consensus 26 gk~vll~F~~~----~C~~~C~~~~~~l~~l~~~~~~~-~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~ 100 (171)
T 2rli_A 26 GQWVLMYFGFT----HCPDICPDELEKLVQVVRQLEAE-PGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGST 100 (171)
T ss_dssp TSEEEEEEECT----TCSSSHHHHHHHHHHHHHHHHHS-TTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCH
T ss_pred CCEEEEEEEcC----CCCchhHHHHHHHHHHHHHHhhc-cCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCH
Confidence 34689999999 9998 999999999999988531 111358888887763 1
Q ss_pred ---hhhHHHcCCCcCc---------------eEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 120 ---SDVFQMLRLNTAP---------------IFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 120 ---~~lf~~l~v~svP---------------~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
.++.+.||+...| +.+++.+.|+. .....+..+.+++.+.|++.+.
T Consensus 101 ~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i-----~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 101 KQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLF-----TDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCE-----EEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeE-----EEEECCCCCHHHHHHHHHHHHH
Confidence 2578899999888 78888665432 2233466788899998887653
No 179
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.38 E-value=7.5e-07 Score=74.51 Aligned_cols=67 Identities=12% Similarity=0.088 Sum_probs=57.0
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc---------------------CChhhHH
Q psy8428 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD---------------------EGSDVFQ 124 (328)
Q Consensus 67 y~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~---------------------~~~~lf~ 124 (328)
+.+++.|| |+ ||++|+...|.++++++.+.. .++.+..++.| .+.++.+
T Consensus 30 ~~vvl~F~~a~----~C~~C~~~~~~l~~~~~~~~~-----~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 100 (161)
T 3drn_A 30 HNIVLYFYPKD----DTPGSTREASAFRDNWDLLKD-----YDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRE 100 (161)
T ss_dssp SEEEEEECSCT----TCHHHHHHHHHHHHTHHHHHT-----TCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHH
T ss_pred CCEEEEEEcCC----CCCchHHHHHHHHHHHHHHHH-----cCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHH
Confidence 34899999 99 999999999999999999863 34888888877 5678999
Q ss_pred HcCCCc----CceEEEecCCCC
Q psy8428 125 MLRLNT----APIFMHFPAKGK 142 (328)
Q Consensus 125 ~l~v~s----vP~l~~f~p~g~ 142 (328)
.|++.+ +|+.+++.+.|+
T Consensus 101 ~~~v~~~~~~~P~~~lid~~G~ 122 (161)
T 3drn_A 101 LYGAKGFILPARITFVIDKKGI 122 (161)
T ss_dssp HTTCCCSSSCCCEEEEECTTSB
T ss_pred HcCCCCcCcccceEEEECCCCE
Confidence 999999 999999977653
No 180
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.38 E-value=1.5e-06 Score=74.41 Aligned_cols=102 Identities=11% Similarity=0.089 Sum_probs=70.0
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC-------------------------Ch
Q psy8428 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------------------------GS 120 (328)
Q Consensus 67 y~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~-------------------------~~ 120 (328)
..+++.|+ |+ ||++|+...|+++++++.+.. .++.+..++.|. +.
T Consensus 32 k~vvl~F~~a~----~C~~C~~~~~~l~~~~~~~~~-----~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 102 (187)
T 1we0_A 32 KWSIVVFYPAD----FSFVCPTELEDVQKEYAELKK-----LGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQ 102 (187)
T ss_dssp SEEEEEECSCT----TCSSCTHHHHHHHHHHHHHHH-----TTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTC
T ss_pred CCEEEEEECCC----CCcchHHHHHHHHHHHHHHHH-----cCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCch
Confidence 46899999 99 999999999999999999863 257777777764 45
Q ss_pred hhHHHcCCC------cCceEEEecCCCCCCCCCceeeeecc----cCHHHHHHHHHhhcCCc--ceeeCCCCCc
Q psy8428 121 DVFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQRVG----YSAEAIVKWIADRTDIQ--IRVFRPPNYS 182 (328)
Q Consensus 121 ~lf~~l~v~------svP~l~~f~p~g~~~~~~~~~~~~~~----~~a~~l~~fl~~~t~~~--i~i~~p~~~~ 182 (328)
++.+.|++. ++|+.+++.+.|+. .....+. .+.+++.+.|++..... .....|.+|.
T Consensus 103 ~~~~~~~v~~~~~g~~~P~~~lid~~G~i-----~~~~~g~~~~~~~~~~l~~~l~~l~~~~~~~~~~~p~~w~ 171 (187)
T 1we0_A 103 TISRQFDVLNEETGLADRGTFIIDPDGVI-----QAIEINADGIGRDASTLINKVKAAQYVRENPGEVCPAKWE 171 (187)
T ss_dssp HHHHHTTCEETTTTEECEEEEEECTTSBE-----EEEEEECTTSCCCTTHHHHHHHHHHHHHTSTTCCC-----
T ss_pred HHHHHhCCCcCCCCceeeEEEEECCCCeE-----EEEEecCCCCCCCHHHHHHHHHHHhhhhhCCCcccccccc
Confidence 788999999 99999999765432 2222232 36778888887654311 1234456663
No 181
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.37 E-value=9.4e-07 Score=73.89 Aligned_cols=90 Identities=10% Similarity=0.155 Sum_probs=66.2
Q ss_pred ccEEEEEeeCCCCCCCcc-chhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC--------------------------
Q psy8428 67 YSAIVMFTALAPQRNCHI-CVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG-------------------------- 119 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~-C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~-------------------------- 119 (328)
..++|.|+++ ||++ |+...|+++++++.+.... .+++.+..+++|..
T Consensus 36 k~vll~f~~~----~C~~~C~~~~~~l~~~~~~~~~~~--~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~ 109 (172)
T 2k6v_A 36 KVVLLFFGFT----RCPDVCPTTLLALKRAYEKLPPKA--QERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPE 109 (172)
T ss_dssp SEEEEEEECT----TCSSHHHHHHHHHHHHHTTSCHHH--HTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHH
T ss_pred CEEEEEEECC----CCcchhHHHHHHHHHHHHHhhhhc--cCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHH
Confidence 4689999999 9998 9999999999998885310 02588888888742
Q ss_pred --hhhHHHcC---------------CCcCceEEEecCCCCCCCCCceeeeeccc--CHHHHHHHHHhh
Q psy8428 120 --SDVFQMLR---------------LNTAPIFMHFPAKGKPKPSDTLDIQRVGY--SAEAIVKWIADR 168 (328)
Q Consensus 120 --~~lf~~l~---------------v~svP~l~~f~p~g~~~~~~~~~~~~~~~--~a~~l~~fl~~~ 168 (328)
.++.++|+ ++++|+++++. .|+. .....+.. +.+++.+.|++.
T Consensus 110 ~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i-----~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 110 AVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRL-----VLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEE-----EEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEE-----EEEECCCCCCCHHHHHHHHHHh
Confidence 24555555 57899999999 6532 22233455 889999998764
No 182
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.36 E-value=1.3e-06 Score=75.74 Aligned_cols=103 Identities=10% Similarity=0.074 Sum_probs=71.1
Q ss_pred CccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC--------------------------
Q psy8428 66 NYSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------------------------- 118 (328)
Q Consensus 66 ~y~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~-------------------------- 118 (328)
+..+++.|| ++ ||++|+...|.++++++.+.. .++.+..++.|.
T Consensus 33 gk~vvl~F~~a~----~C~~C~~~~~~l~~l~~~~~~-----~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (198)
T 1zof_A 33 KNGVILFFWPKD----FTFVCPTEIIAFDKRVKDFHE-----KGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVA 103 (198)
T ss_dssp SSEEEEEECSCT----TCSSCCTHHHHHHHTHHHHHH-----TTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEE
T ss_pred CCcEEEEEECCC----CCCchHHHHHHHHHHHHHHHH-----cCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEE
Confidence 346899999 99 999999999999999998863 347777777663
Q ss_pred --ChhhHHHcCCC-----cCceEEEecCCCCCCCCCceeeeecc----cCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8428 119 --GSDVFQMLRLN-----TAPIFMHFPAKGKPKPSDTLDIQRVG----YSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (328)
Q Consensus 119 --~~~lf~~l~v~-----svP~l~~f~p~g~~~~~~~~~~~~~~----~~a~~l~~fl~~~t~~~-i~i~~p~~~~ 182 (328)
+.++.+.|++. ++|+.+++.+.|+. .....+. .+.+++.+.|++..... -....|.||.
T Consensus 104 d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i-----~~~~~g~~~~~~~~~~l~~~l~~l~~~~~~~~~~p~~w~ 174 (198)
T 1zof_A 104 DITKSISRDYDVLFEEAIALRGAFLIDKNMKV-----RHAVINDLPLGRNADEMLRMVDALLHFEEHGEVCPAGWR 174 (198)
T ss_dssp CTTSHHHHHTTCEETTTEECEEEEEEETTTEE-----EEEEEESSSCCCHHHHHHHHHHHHHHHHSSCCCCC----
T ss_pred CCchHHHHHhCCcccCCcccceEEEECCCCEE-----EEEEecCCCCCCCHHHHHHHHHHHHHhhccCCccCCcCc
Confidence 45789999999 99999999776532 1222232 25788888887654111 1333577885
No 183
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.29 E-value=3.9e-06 Score=69.89 Aligned_cols=90 Identities=11% Similarity=0.111 Sum_probs=64.8
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC-------C----hhhHH-Hc--------
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------G----SDVFQ-ML-------- 126 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~-------~----~~lf~-~l-------- 126 (328)
..+++.|+++ ||++|+...|+++++++.+.. +++.+..++++. . .+..+ ++
T Consensus 33 k~vll~f~a~----~C~~C~~~~~~l~~l~~~~~~-----~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (170)
T 2p5q_A 33 KVLLIVNVAS----KCGMTNSNYAEMNQLYEKYKD-----QGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFD 103 (170)
T ss_dssp SEEEEEEECS----SSTTHHHHHHHHHHHHHHHGG-----GTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBC
T ss_pred CEEEEEEEec----cCCccHHHHHHHHHHHHHhcc-----CCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEe
Confidence 4689999999 999999999999999999863 248888888752 2 22223 32
Q ss_pred ---------------------CC--CcCc---eEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 127 ---------------------RL--NTAP---IFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 127 ---------------------~v--~svP---~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
++ +++| +.+++.+.|+. .....+..+.+++.+.|++.+.
T Consensus 104 ~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i-----~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 104 KIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQV-----VDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp CCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCE-----EEEECTTSCGGGGHHHHHHHTT
T ss_pred eeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCE-----EEeeCCCCCHHHHHHHHHHHhh
Confidence 45 6789 78888665432 2333456678889999988764
No 184
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.28 E-value=3e-06 Score=71.42 Aligned_cols=89 Identities=10% Similarity=0.037 Sum_probs=61.8
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc-------C----ChhhH------------
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-------E----GSDVF------------ 123 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~-------~----~~~lf------------ 123 (328)
..++|.|||+ ||++|+ ..|.++++++.+.. .++.+..++++ + ..+..
T Consensus 33 k~vll~F~a~----wC~~C~-~~~~l~~l~~~~~~-----~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~ 102 (171)
T 3cmi_A 33 KVVLIVNVAS----KCGFTP-QYKELEALYKRYKD-----EGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMK 102 (171)
T ss_dssp CEEEEEEEES----SSCCHH-HHHHHHHHHHHHGG-----GTEEEEEEEECSCC------------------CCCSCBBC
T ss_pred CEEEEEEEec----CCCcch-hHHHHHHHHHHhcc-----CCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEe
Confidence 4689999999 999999 99999999999863 24777777653 1 11111
Q ss_pred ------------------HHcCCCcCc------eEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 124 ------------------QMLRLNTAP------IFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 124 ------------------~~l~v~svP------~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
+.+++.++| +.+++.+.|+. .....+..+.+++.+.|++.+.
T Consensus 103 d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i-----~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 103 KIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKV-----YERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp CCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCE-----EEEECTTSCGGGGHHHHHHHHT
T ss_pred eccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCE-----EEEeCCCCCHHHHHHHHHHHHH
Confidence 247889999 78888665432 2223355677888888877653
No 185
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.27 E-value=2.9e-06 Score=71.80 Aligned_cols=84 Identities=15% Similarity=0.227 Sum_probs=62.3
Q ss_pred CCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC---------------------------
Q psy8428 64 PRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF--------------------------- 116 (328)
Q Consensus 64 ~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~--------------------------- 116 (328)
+....+|+.|+++ ||++|+.++|+++++.+.+. ++.+...++
T Consensus 20 ~~a~v~i~~f~d~----~Cp~C~~~~~~l~~l~~~~~-------~v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~ 88 (175)
T 3gyk_A 20 PEGDVTVVEFFDY----NCPYCRRAMAEVQGLVDADP-------NVRLVYREWPILGEGSDFAARAALAARQQGKYEAFH 88 (175)
T ss_dssp TTCSEEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TEEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHH
T ss_pred CCCCEEEEEEECC----CCccHHHHHHHHHHHHHhCC-------CEEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHH
Confidence 3345678999999 99999999999999988753 355555442
Q ss_pred ------------------------------------------cCChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeec
Q psy8428 117 ------------------------------------------DEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRV 154 (328)
Q Consensus 117 ------------------------------------------~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~ 154 (328)
+++.+..+++||+++|++++ .| . ...|
T Consensus 89 ~~lf~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g------~---~~~G 157 (175)
T 3gyk_A 89 WALMGMSGKANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--ED------A---LVPG 157 (175)
T ss_dssp HHHHTCSSCCSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TT------E---EECS
T ss_pred HHHHhcCCCCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CC------E---EeeC
Confidence 33456788999999999987 33 1 1236
Q ss_pred ccCHHHHHHHHHhhc
Q psy8428 155 GYSAEAIVKWIADRT 169 (328)
Q Consensus 155 ~~~a~~l~~fl~~~t 169 (328)
..+.+++.+.|++.+
T Consensus 158 ~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 158 FVEQSQLQDAVDRAR 172 (175)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 678899999987654
No 186
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.27 E-value=4.1e-06 Score=69.72 Aligned_cols=42 Identities=7% Similarity=0.057 Sum_probs=36.1
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD 117 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~ 117 (328)
..++|.|||+ ||++|+...|+++++.+.+.. +++.+..++++
T Consensus 32 k~vlv~f~a~----~C~~C~~~~~~l~~l~~~~~~-----~~~~vv~v~~d 73 (169)
T 2v1m_A 32 HVCLIVNVAC----KCGATDKNYRQLQEMHTRLVG-----KGLRILAFPCN 73 (169)
T ss_dssp SEEEEEEECS----SSTTHHHHHHHHHHHHHHHGG-----GTEEEEEEECC
T ss_pred CEEEEEEeec----cCCchHHHHHHHHHHHHHhhc-----CCeEEEEEECC
Confidence 4689999999 999999999999999999863 34888888775
No 187
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.26 E-value=4.1e-06 Score=72.02 Aligned_cols=90 Identities=11% Similarity=0.133 Sum_probs=64.4
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC-------Ch----hhH-H---------
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------GS----DVF-Q--------- 124 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~-------~~----~lf-~--------- 124 (328)
+..++|.|+|+ ||++|+...|+++++.+.+.. .++.+..+++|+ .+ +.. +
T Consensus 48 Gk~vll~F~at----wC~~C~~~~~~l~~l~~~~~~-----~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l 118 (190)
T 2vup_A 48 GSPLLIYNVAS----KCGYTKGGYETATTLYNKYKS-----QGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIM 118 (190)
T ss_dssp TSCEEEEEECS----SSTTHHHHHHHHHHHHHHHGG-----GTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBB
T ss_pred CCEEEEEEecC----CCCccHHHHHHHHHHHHHHhc-----CCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEE
Confidence 34699999999 999999999999999999863 247788887762 11 122 1
Q ss_pred --------------------HcCCCcCc------eEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 125 --------------------MLRLNTAP------IFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 125 --------------------~l~v~svP------~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
.+++.++| +.+++.+.|+. .....+..+.+++.+.|++.+
T Consensus 119 ~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i-----~~~~~g~~~~~~l~~~i~~ll 184 (190)
T 2vup_A 119 AKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVP-----VERFSPGASVKDIEKKLIPLL 184 (190)
T ss_dssp CCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCE-----EEEECTTCCHHHHHHHHHHHH
T ss_pred eecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcE-----EEEECCCCCHHHHHHHHHHHH
Confidence 14788899 77777665432 233345567888999888765
No 188
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.26 E-value=4.4e-06 Score=69.18 Aligned_cols=86 Identities=10% Similarity=0.001 Sum_probs=63.1
Q ss_pred cEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC-----------------------ChhhH
Q psy8428 68 SAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-----------------------GSDVF 123 (328)
Q Consensus 68 ~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~-----------------------~~~lf 123 (328)
.+++.|+ ++ ||++|+...|.++++++.+.. .++.+..++.|+ +.++.
T Consensus 38 ~vvl~F~~a~----~C~~C~~~~~~l~~~~~~~~~-----~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 108 (160)
T 1xvw_A 38 NVLLVFFPLA----FTGICQGELDQLRDHLPEFEN-----DDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVS 108 (160)
T ss_dssp EEEEEECSCT----TSSHHHHHHHHHHHTGGGTSS-----SSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHH
T ss_pred CEEEEEECCC----CCCchHHHHHHHHHHHHHHHH-----CCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHH
Confidence 5888897 99 999999999999999988752 358888887763 67789
Q ss_pred HHcCCC----cCc--eEEEecCCCCCCCCCceeeeeccc----CHHHHHHHHHh
Q psy8428 124 QMLRLN----TAP--IFMHFPAKGKPKPSDTLDIQRVGY----SAEAIVKWIAD 167 (328)
Q Consensus 124 ~~l~v~----svP--~l~~f~p~g~~~~~~~~~~~~~~~----~a~~l~~fl~~ 167 (328)
+.|++. ++| +.+++.+.|+. .....+.. +.+++.+.|++
T Consensus 109 ~~~~v~~~~~~~p~~~~~lid~~G~i-----~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 109 QAYGVFNEQAGIANRGTFVVDRSGII-----RFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp HHTTCEETTTTEECSEEEEECTTSBE-----EEEEECCTTCCCCHHHHHHHHHH
T ss_pred HHcCCccccCCCeeeeEEEECCCCeE-----EEEEecCCCCCCCHHHHHHHHHH
Confidence 999999 999 77777665432 12222322 45677776654
No 189
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.23 E-value=2.5e-06 Score=75.45 Aligned_cols=91 Identities=11% Similarity=0.125 Sum_probs=59.9
Q ss_pred CCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHc-c---cccCC-----------------------------CCcEE
Q psy8428 64 PRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSF-R---YSQMY-----------------------------SNKLF 110 (328)
Q Consensus 64 ~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~-~---~~~~~-----------------------------~~~v~ 110 (328)
++...+++.||++ ||++|+.+.|+++++++.= . ...+. ++.+-
T Consensus 84 ~~~k~~vv~F~d~----~Cp~C~~~~~~l~~l~~~~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~ 159 (216)
T 1eej_A 84 PQEKHVITVFTDI----TCGYCHKLHEQMADYNALGITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVA 159 (216)
T ss_dssp TTCCEEEEEEECT----TCHHHHHHHTTHHHHHHTTEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCC
T ss_pred CCCCEEEEEEECC----CCHHHHHHHHHHHHHHhCCcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCC
Confidence 3455688999999 9999999999999987530 0 00000 00000
Q ss_pred --EEEEECcCChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhh
Q psy8428 111 --FILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (328)
Q Consensus 111 --F~~vD~~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~ 168 (328)
.+..+++++.++.+++||+++|++ ++.+| . . ..|..+.++|.++|++.
T Consensus 160 ~~~~~~~v~~~~~l~~~~gV~gtPt~-v~~dG------~--~-~~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 160 PASCDVDIADHYALGVQLGVSGTPAV-VLSNG------T--L-VPGYQPPKEMKEFLDEH 209 (216)
T ss_dssp CCCCSCCHHHHHHHHHHHTCCSSSEE-ECTTS------C--E-EESCCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCccCEE-EEcCC------e--E-ecCCCCHHHHHHHHHHh
Confidence 012234456789999999999999 45544 1 1 23667889999998765
No 190
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.23 E-value=8.1e-06 Score=70.05 Aligned_cols=91 Identities=11% Similarity=0.168 Sum_probs=63.3
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc-------CCh-hh---------------
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-------EGS-DV--------------- 122 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~-------~~~-~l--------------- 122 (328)
+..++|.|||+ ||++|+...|+++++.+.+.. .++.+..++++ +++ ++
T Consensus 46 Gk~vlv~F~at----wC~~C~~~~p~l~~l~~~~~~-----~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~ 116 (187)
T 3dwv_A 46 GSPLLIYNVAS----KCGYTKGGYETATTLYNKYKS-----QGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIM 116 (187)
T ss_dssp TSCEEEEEECC----BCSCCTTHHHHHHHHHHHHGG-----GTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBB
T ss_pred CCEEEEEEecC----CCCCcHHHHHHHHHHHHHhhh-----CCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCcee
Confidence 34699999999 999999999999999999863 23666666554 111 11
Q ss_pred -------------H--------HHcCCCcCc---eEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 123 -------------F--------QMLRLNTAP---IFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 123 -------------f--------~~l~v~svP---~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
+ ..+++.++| +.+++.+.|+. .....+..+.+++.+.|++.++
T Consensus 117 ~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i-----~~~~~g~~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 117 AKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVP-----VERFSPGASVKDIEEKLIPLLG 183 (187)
T ss_dssp CCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCE-----EEEECTTCCHHHHHHHHHHHC-
T ss_pred eccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCE-----EEEECCCCCHHHHHHHHHHHHh
Confidence 1 223556777 88888766532 2333456788999999988765
No 191
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.20 E-value=7.7e-07 Score=65.65 Aligned_cols=71 Identities=13% Similarity=0.289 Sum_probs=52.4
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH---HcCCCcCceEEEecCCCCCCCC
Q psy8428 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ---MLRLNTAPIFMHFPAKGKPKPS 146 (328)
Q Consensus 70 vV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~---~l~v~svP~l~~f~p~g~~~~~ 146 (328)
+++|+++ ||++|+.+++.+++. .+-|..+|++++++..+ ++|++++|+++ .+|
T Consensus 3 v~~f~~~----~C~~C~~~~~~l~~~------------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~--~~g------ 58 (81)
T 1h75_A 3 ITIYTRN----DCVQCHATKRAMENR------------GFDFEMINVDRVPEAAEALRAQGFRQLPVVI--AGD------ 58 (81)
T ss_dssp EEEEECT----TCHHHHHHHHHHHHT------------TCCCEEEETTTCHHHHHHHHHTTCCSSCEEE--ETT------
T ss_pred EEEEcCC----CChhHHHHHHHHHHC------------CCCeEEEECCCCHHHHHHHHHhCCCccCEEE--ECC------
Confidence 5779999 999999999988752 25577899998765544 58999999984 333
Q ss_pred CceeeeecccCHHHHHHHHHhh
Q psy8428 147 DTLDIQRVGYSAEAIVKWIADR 168 (328)
Q Consensus 147 ~~~~~~~~~~~a~~l~~fl~~~ 168 (328)
.. .++.+.+++.+++++.
T Consensus 59 ~~----~~g~~~~~l~~~l~~~ 76 (81)
T 1h75_A 59 LS----WSGFRPDMINRLHPAP 76 (81)
T ss_dssp EE----EESCCHHHHGGGSCCC
T ss_pred EE----EecCCHHHHHHHHhcc
Confidence 11 2567788887777554
No 192
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.16 E-value=9.4e-06 Score=70.17 Aligned_cols=102 Identities=12% Similarity=0.061 Sum_probs=71.9
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC---------------------------
Q psy8428 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE--------------------------- 118 (328)
Q Consensus 67 y~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~--------------------------- 118 (328)
..+++.|+ ++ ||++|+...|+++++++.+.. .++.+..+++|.
T Consensus 35 k~vvl~F~~a~----~C~~C~~~~~~l~~l~~~~~~-----~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D 105 (197)
T 1qmv_A 35 KYVVLFFYPLD----FTFVAPTEIIAFSNRAEDFRK-----LGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLAD 105 (197)
T ss_dssp SEEEEEECSCT----TSSHHHHHHHHHHHTHHHHHT-----TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEEC
T ss_pred CeEEEEEECCC----CCCCCHHHHHHHHHHHHHHHH-----CCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEEC
Confidence 36899999 99 999999999999999998863 357777777763
Q ss_pred -ChhhHHHcCCC------cCceEEEecCCCCCCCCCceeeeec----ccCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8428 119 -GSDVFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQRV----GYSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (328)
Q Consensus 119 -~~~lf~~l~v~------svP~l~~f~p~g~~~~~~~~~~~~~----~~~a~~l~~fl~~~t~~~-i~i~~p~~~~ 182 (328)
+.++.+.|++. ++|+.+++.+.|.. .....+ +.+.+++.+.|++..... -...-|.||.
T Consensus 106 ~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i-----~~~~~g~~~~~~~~~e~l~~l~~l~~~~~~~~~cp~~w~ 176 (197)
T 1qmv_A 106 VTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVL-----RQITVNDLPVGRSVDEALRLVQAFQYTDEHGEVCPAGWK 176 (197)
T ss_dssp TTCHHHHHTTCEETTTTEECEEEEEECTTSBE-----EEEEEECTTBCCCHHHHHHHHHHHHHHHHHCCBBCTTCC
T ss_pred CcHHHHHHcCCccCCCCceeeEEEEECCCCcE-----EEEEeCCCCCCCCHHHHHHHHHhcchhhccCCccCCCcC
Confidence 34688999999 89999999776532 111112 346788888887653211 1233455653
No 193
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.16 E-value=6.5e-06 Score=70.17 Aligned_cols=42 Identities=12% Similarity=0.107 Sum_probs=35.8
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD 117 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~ 117 (328)
..++|.|+|+ ||++|+...|+++++++.+.. +++.+..++++
T Consensus 48 k~vll~F~at----wC~~C~~~~~~l~~l~~~~~~-----~~v~vv~vs~d 89 (183)
T 2obi_A 48 FVCIVTNVAS----QCGKTEVNYTQLVDLHARYAE-----CGLRILAFPCN 89 (183)
T ss_dssp SEEEEEEECS----SSTTHHHHHHHHHHHHHHHGG-----GTEEEEEEECC
T ss_pred CEEEEEEeCC----CCCCcHHHHHHHHHHHHHHhc-----CCeEEEEEECC
Confidence 4689999999 999999999999999999863 34788888765
No 194
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.16 E-value=6.6e-06 Score=70.18 Aligned_cols=90 Identities=10% Similarity=0.052 Sum_probs=62.5
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC-------Ch----hhHHH---------
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------GS----DVFQM--------- 125 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~-------~~----~lf~~--------- 125 (328)
+..++|.|+|+ ||++|+...|+++++++.+.. +++.+..+++++ .+ +..++
T Consensus 49 Gk~vlv~F~at----wC~~C~~~~p~l~~l~~~~~~-----~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~ 119 (181)
T 2p31_A 49 GSVSLVVNVAS----ECGFTDQHYRALQQLQRDLGP-----HHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMF 119 (181)
T ss_dssp TSEEEEEEECS----SSTTHHHHHHHHHHHHHHHGG-----GTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBB
T ss_pred CCEEEEEEecc----CCCCcHHHHHHHHHHHHHhhc-----CCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeE
Confidence 34699999999 999999999999999999863 348888887752 21 22222
Q ss_pred ---------------cCCCcCc-------eEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 126 ---------------LRLNTAP-------IFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 126 ---------------l~v~svP-------~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
++++++| +.+++.+.|+. .....+..+.+++.+.|++.+
T Consensus 120 ~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i-----~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 120 SKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKV-----VGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp CCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCE-----EEEECTTSCHHHHHHHHHTTC
T ss_pred eecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCCE-----EEEeCCCCCHHHHHHHHHHHh
Confidence 2355678 66666555432 222345567889999888754
No 195
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.14 E-value=6.1e-06 Score=59.47 Aligned_cols=69 Identities=20% Similarity=0.313 Sum_probs=53.0
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH---HcCCCcCceEEEecCCCCCCCC
Q psy8428 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ---MLRLNTAPIFMHFPAKGKPKPS 146 (328)
Q Consensus 70 vV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~---~l~v~svP~l~~f~p~g~~~~~ 146 (328)
+++|+++ ||++|+..++.+++. ++-|..+|++++++..+ ++++.++|++.. .|
T Consensus 3 i~~y~~~----~C~~C~~~~~~l~~~------------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g------ 58 (75)
T 1r7h_A 3 ITLYTKP----ACVQCTATKKALDRA------------GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--DG------ 58 (75)
T ss_dssp EEEEECT----TCHHHHHHHHHHHHT------------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TT------
T ss_pred EEEEeCC----CChHHHHHHHHHHHc------------CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CC------
Confidence 5779999 999999999987753 25577889998876655 899999999984 33
Q ss_pred CceeeeecccCHHHHHHHHH
Q psy8428 147 DTLDIQRVGYSAEAIVKWIA 166 (328)
Q Consensus 147 ~~~~~~~~~~~a~~l~~fl~ 166 (328)
. . .+|.+.+++.++++
T Consensus 59 ~-~---~~g~~~~~l~~~l~ 74 (75)
T 1r7h_A 59 E-H---WSGFRPERIKQLQA 74 (75)
T ss_dssp E-E---EESCCHHHHHHHHC
T ss_pred e-E---EcCCCHHHHHHHHh
Confidence 1 1 35678888888873
No 196
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.12 E-value=1.2e-05 Score=71.15 Aligned_cols=102 Identities=13% Similarity=0.107 Sum_probs=67.4
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC---------------------------
Q psy8428 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE--------------------------- 118 (328)
Q Consensus 67 y~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~--------------------------- 118 (328)
..+++.|+ ++ ||++|+...|.++++++.+.. .++.+..+++|.
T Consensus 57 k~vll~F~pa~----~Cp~C~~~~~~l~~l~~~~~~-----~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D 127 (220)
T 1zye_A 57 KYLVLFFYPLD----FTFVCPTEIIAFSDKASEFHD-----VNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSD 127 (220)
T ss_dssp SEEEEEECSCT----TCSSSHHHHHHHHHHHHHHHH-----TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEEC
T ss_pred CeEEEEEECCC----CCCCCHHHHHHHHHHHHHHHH-----CCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEEC
Confidence 46889999 99 999999999999999999863 246666666543
Q ss_pred -ChhhHHHcCCC------cCceEEEecCCCCCCCCCceeeeec----ccCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8428 119 -GSDVFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQRV----GYSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (328)
Q Consensus 119 -~~~lf~~l~v~------svP~l~~f~p~g~~~~~~~~~~~~~----~~~a~~l~~fl~~~t~~~-i~i~~p~~~~ 182 (328)
+.++.+.|++. ++|+++++.+.|+.. +.. .+ +.+.+++.+.|++..... -...-|.||.
T Consensus 128 ~~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~----~~~-~g~~~~~~~~~ell~~l~~l~~~~~~~~~cp~~W~ 198 (220)
T 1zye_A 128 LTKQISRDYGVLLEGPGLALRGLFIIDPNGVIK----HLS-VNDLPVGRSVEETLRLVKAFQFVEAHGEVSPANWT 198 (220)
T ss_dssp TTSHHHHHTTCEETTTTEECEEEEEECTTSBEE----EEE-EECTTCCCCHHHHHHHHHHHHHTTC----------
T ss_pred CcHHHHHHhCCeecCCCcccceEEEECCCCEEE----EEE-ecCCCCCCCHHHHHHHHHHhhhhcccCCccCCCCC
Confidence 45789999999 999999997765421 111 12 346788888887654221 2344567774
No 197
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.12 E-value=5.1e-06 Score=72.25 Aligned_cols=102 Identities=9% Similarity=0.099 Sum_probs=72.6
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC---------------------------
Q psy8428 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE--------------------------- 118 (328)
Q Consensus 67 y~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~--------------------------- 118 (328)
..+++.|+ ++ ||++|+...|.++++++.+.. .++.+..++.|.
T Consensus 37 k~vvl~F~~~~----~C~~C~~~~~~l~~l~~~~~~-----~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D 107 (202)
T 1uul_A 37 KWLVLFFYPMD----FTFVCPTEICQFSDRVKEFSD-----IGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILAD 107 (202)
T ss_dssp SEEEEEECSCT----TCSHHHHHHHHHHHTHHHHHT-----TTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEEC
T ss_pred CeEEEEEECCC----CCCcCHHHHHHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEEC
Confidence 36899999 99 999999999999999999863 357777777753
Q ss_pred -ChhhHHHcCCC------cCceEEEecCCCCCCCCCceeeeec----ccCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8428 119 -GSDVFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQRV----GYSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (328)
Q Consensus 119 -~~~lf~~l~v~------svP~l~~f~p~g~~~~~~~~~~~~~----~~~a~~l~~fl~~~t~~~-i~i~~p~~~~ 182 (328)
+.++.+.|++. ++|+.+++.+.|+.. ....+ +.+.+++.+.|++..... -...-|.||.
T Consensus 108 ~~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~-----~~~~g~~~~~~~~~ell~~l~~l~~~~~~~~~~p~~w~ 178 (202)
T 1uul_A 108 KTKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLR-----QITVNDLPVGRDVDEALRLVKAFQFVEKHGEVCPANWK 178 (202)
T ss_dssp TTCHHHHHHTCEETTTTEECEEEEEECTTSBEE-----EEEEECTTBCCCHHHHHHHHHHHHHHHHHSCBBCTTCC
T ss_pred CchHHHHHcCCccCCCCceeeEEEEECCCCEEE-----EEEeCCCCCCCCHHHHHHHHHHhhhhhhcCCccCCCcC
Confidence 45788999999 999999997765421 11112 346788888887654211 1334466663
No 198
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.11 E-value=7.8e-06 Score=72.57 Aligned_cols=103 Identities=13% Similarity=0.150 Sum_probs=77.0
Q ss_pred CCeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH
Q psy8428 46 KAVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (328)
Q Consensus 46 ~~VI~L~~-~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (328)
..+++|++ +++++++. . +-.++|-|.++ | |....|+|+++|+.+. ++.|+.. .++++++
T Consensus 9 ~~~~~l~s~~~~~~~l~-~--~~v~vVgff~~----~---~~~~~~~f~~~A~~l~-------~~~F~~t---~~~~v~~ 68 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIA-A--TEVAVIGFFQD----L---EIPAVPILHSMVQKFP-------GVSFGIS---TDSEVLT 68 (227)
T ss_dssp CCCEECCSHHHHHHHHH-T--SSEEEEEECSC----S---CSTHHHHHHHHTTTCT-------TSEEEEE---CCHHHHH
T ss_pred CCCeeeCCHHHHHHHHh-c--CCeEEEEEecC----C---CchhHHHHHHHHHhCC-------CceEEEE---CCHHHHH
Confidence 45788855 89999874 3 33577888888 7 6789999999998873 5778764 4789999
Q ss_pred HcCCCcCceEEEecCCCCCCCCCceeeee---cccCHHHHHHHHHhhcCCcc
Q psy8428 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQR---VGYSAEAIVKWIADRTDIQI 173 (328)
Q Consensus 125 ~l~v~svP~l~~f~p~g~~~~~~~~~~~~---~~~~a~~l~~fl~~~t~~~i 173 (328)
+++++. |++.+|++..+ ...++.. +++++++|.+|++++.-..+
T Consensus 69 ~~~v~~-p~i~lfk~~~~----~~~~~~~~~~g~~~~~~l~~fi~~~~~plv 115 (227)
T 4f9z_D 69 HYNITG-NTICLFRLVDN----EQLNLEDEDIESIDATKLSRFIEINSLHMV 115 (227)
T ss_dssp HTTCCS-SEEEEEETTTT----EEEEECHHHHHTCCHHHHHHHHHHHCCCSE
T ss_pred HcCCCC-CeEEEEEecCc----ccccccccccCCCCHHHHHHHHHHhCCCce
Confidence 999998 99999997521 1122221 36899999999999865444
No 199
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.10 E-value=1.5e-05 Score=68.45 Aligned_cols=102 Identities=14% Similarity=0.173 Sum_probs=71.3
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC---------------------------
Q psy8428 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE--------------------------- 118 (328)
Q Consensus 67 y~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~--------------------------- 118 (328)
..+++.|+ ++ ||++|+...|+++++++.+.. .++.+..++.|.
T Consensus 32 k~vvl~F~~a~----~C~~C~~~~~~l~~~~~~~~~-----~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D 102 (192)
T 2h01_A 32 KYVLLYFYPLD----FTFVCPSEIIALDKALDSFKE-----RNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISD 102 (192)
T ss_dssp CEEEEEECSCS----SCSSCCHHHHHHHHTHHHHHH-----TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEEC
T ss_pred CeEEEEEECCC----CCCCCHHHHHHHHHHHHHHHH-----CCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEEC
Confidence 36899999 99 999999999999999998863 246666666652
Q ss_pred -ChhhHHHcCCC-----cCceEEEecCCCCCCCCCceeeeec----ccCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8428 119 -GSDVFQMLRLN-----TAPIFMHFPAKGKPKPSDTLDIQRV----GYSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (328)
Q Consensus 119 -~~~lf~~l~v~-----svP~l~~f~p~g~~~~~~~~~~~~~----~~~a~~l~~fl~~~t~~~-i~i~~p~~~~ 182 (328)
+.++.+.||+. ++|+.+++.+.|+. .....+ +.+.+++.+.|++..... -...-|.||.
T Consensus 103 ~~~~~~~~~gv~~~~g~~~P~~~liD~~G~i-----~~~~~g~~~~~~~~~~l~~~l~~l~~~~~~~~~cp~~w~ 172 (192)
T 2h01_A 103 ISKSIARSYDVLFNESVALRAFVLIDKQGVV-----QHLLVNNLALGRSVDEILRLIDALQHHEKYGDVCPANWQ 172 (192)
T ss_dssp TTSHHHHHTTCEETTTEECCEEEEECTTSBE-----EEEEEGGGSSGGGHHHHHHHHHHHHHHHHHCCCCCSSCC
T ss_pred CcHHHHHHhCCcCcCCceeeEEEEEcCCCEE-----EEEEeCCCCCCCCHHHHHHHHHHHhhhhhcCCCccCCCC
Confidence 35688999999 99999999776532 111122 245778888876643211 1334566773
No 200
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.06 E-value=7.6e-06 Score=72.12 Aligned_cols=84 Identities=6% Similarity=0.151 Sum_probs=59.2
Q ss_pred CCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEE-------------------------------
Q psy8428 64 PRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFI------------------------------- 112 (328)
Q Consensus 64 ~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~------------------------------- 112 (328)
+....+++.|+++ ||++|+.++|+++++++. . -++.+.
T Consensus 84 ~~~k~~vv~F~d~----~Cp~C~~~~~~l~~~~~~-~------v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~ 152 (211)
T 1t3b_A 84 KNEKHVVTVFMDI----TCHYCHLLHQQLKEYNDL-G------ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEA 152 (211)
T ss_dssp TTCSEEEEEEECT----TCHHHHHHHTTHHHHHHT-T------EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHH
T ss_pred CCCCEEEEEEECC----CCHhHHHHHHHHHHHHhC-C------cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHH
Confidence 3445688999999 999999999999997652 0 011111
Q ss_pred -----------EEECcCChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhh
Q psy8428 113 -----------LVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (328)
Q Consensus 113 -----------~vD~~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~ 168 (328)
..+++++.++.+++||+++|++++ .+| + .+ .|..+.++|.++|++.
T Consensus 153 ~~~~~~~~~~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG-~-----~~---~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 153 EKGNLPKEVKTPNIVKKHYELGIQFGVRGTPSIVT-STG-E-----LI---GGYLKPADLLRALEET 209 (211)
T ss_dssp HTTCCCSSCCCSSHHHHHHHHHHHHTCCSSCEEEC-TTS-C-----CC---CSCCCHHHHHHHHHHC
T ss_pred HcCCCCChHHHHHHHHHHHHHHHHcCCCcCCEEEE-eCC-E-----Ee---cCCCCHHHHHHHHHhc
Confidence 122334678899999999999987 544 2 11 3556899999999764
No 201
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.01 E-value=2.5e-05 Score=68.86 Aligned_cols=90 Identities=12% Similarity=0.149 Sum_probs=65.3
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC---------------------------
Q psy8428 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE--------------------------- 118 (328)
Q Consensus 67 y~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~--------------------------- 118 (328)
..+++.|| ++ ||++|+...|+++++++.+.. .++.+.-++.|.
T Consensus 53 k~vvl~F~pa~----~C~~C~~~~~~l~~l~~~~~~-----~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D 123 (213)
T 2i81_A 53 KYVLLYFYPLD----FTFVCPSEIIALDKALDAFHE-----RNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSD 123 (213)
T ss_dssp CEEEEEECSCT----TSSHHHHHHHHHHHTHHHHHH-----TTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEEC
T ss_pred CeEEEEEEcCC----CCCCCHHHHHHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEEC
Confidence 36899999 99 999999999999999998863 235555555442
Q ss_pred -ChhhHHHcCCC-----cCceEEEecCCCCCCCCCceeeee---cccCHHHHHHHHHhhc
Q psy8428 119 -GSDVFQMLRLN-----TAPIFMHFPAKGKPKPSDTLDIQR---VGYSAEAIVKWIADRT 169 (328)
Q Consensus 119 -~~~lf~~l~v~-----svP~l~~f~p~g~~~~~~~~~~~~---~~~~a~~l~~fl~~~t 169 (328)
+.++.++||+. .+|+.+++.+.|+.. +.... .+.+.+++.+.|++..
T Consensus 124 ~~~~~~~~ygv~~~~g~~~p~~~lID~~G~i~----~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 124 ITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQ----HLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp TTSHHHHHTTCEETTTEECEEEEEECTTSBEE----EEEEECTTCCCCHHHHHHHHHHHH
T ss_pred CchHHHHHhCCccccCCcccEEEEECCCCEEE----EEEecCCCCCCCHHHHHHHHHHHH
Confidence 45788999999 999999998765421 11111 1345788888887543
No 202
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.99 E-value=3.6e-05 Score=73.33 Aligned_cols=132 Identities=15% Similarity=0.137 Sum_probs=93.3
Q ss_pred chHHHHHHHHhhhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEE
Q psy8428 31 SLGDRVLHLSEMNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLF 110 (328)
Q Consensus 31 ~~~~~~~~L~~l~~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~ 110 (328)
...+.+.+......-.-|.++|.+|+.++.. ++.....++.|... +|..|.++.+.++++|+.+... +++.
T Consensus 213 ~~~~~l~~fi~~~~~p~v~elt~~~~~~~~~-~~~~~~~~~~f~~~----~~~~~~~~~~~l~~vA~~~~~~----~ki~ 283 (367)
T 3us3_A 213 NSEEEIVNFVEEHRRSTLRKLKPESMYETWE-DDMDGIHIVAFAEE----ADPDGYEFLEILKSVAQDNTDN----PDLS 283 (367)
T ss_dssp CCHHHHHHHHHHTCSCSEEECCGGGHHHHHH-SCBTTEEEEEECCT----TSHHHHHHHHHHHHHHHHTTTC----TTCC
T ss_pred CCHHHHHHHHHHcCccceeecChhhHHHHHh-hccCCcEEEEEEcC----CChhHHHHHHHHHHHHHHcCCC----CceE
Confidence 3445555555443344599999999988764 32222345667777 8999999999999999999621 2699
Q ss_pred EEEEECcCChhhH----HHcCCC-cCceEEEecCCCCCCCCCceeeee--cccCHHHHHHHHHhhcCCcc
Q psy8428 111 FILVDFDEGSDVF----QMLRLN-TAPIFMHFPAKGKPKPSDTLDIQR--VGYSAEAIVKWIADRTDIQI 173 (328)
Q Consensus 111 F~~vD~~~~~~lf----~~l~v~-svP~l~~f~p~g~~~~~~~~~~~~--~~~~a~~l~~fl~~~t~~~i 173 (328)
|+.+|.++.+... +.+|++ +.|.+.++.+.... ...|.... +..+++.+.+|+++.+.-.+
T Consensus 284 F~~id~~~~~~~l~~~~~~fgl~~~~P~~~i~~~~~~~--~~~y~~~~~~~~~t~~~i~~F~~~~~~Gkl 351 (367)
T 3us3_A 284 IIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDAD--SVWMEMDDEEDLPSAEELEDWLEDVLEGEI 351 (367)
T ss_dssp EEEECGGGCTTTHHHHHHHHTCCTTSCEEEEEETTTCC--EEECCCCTTSCCCCHHHHHHHHHHHHHTSS
T ss_pred EEEECCccchhHHHHHHHhcCCCCCCCeEEEEeccccc--ceeecCCcccccCCHHHHHHHHHHHHcCCc
Confidence 9999999977554 458998 89999999875210 01233332 35789999999998776444
No 203
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.99 E-value=1.8e-05 Score=71.17 Aligned_cols=87 Identities=11% Similarity=0.118 Sum_probs=60.5
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC------------------------------
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF------------------------------ 116 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~------------------------------ 116 (328)
..+++.|+.+ ||++|+.+.|+++++.+. +++.+...++
T Consensus 98 k~~v~~F~D~----~Cp~C~~~~~~l~~~~~~--------g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~ 165 (241)
T 1v58_A 98 PVIVYVFADP----FCPYCKQFWQQARPWVDS--------GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEAS 165 (241)
T ss_dssp SEEEEEEECT----TCHHHHHHHHHHHHHHHT--------TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHT
T ss_pred CeEEEEEECC----CChhHHHHHHHHHHHHhC--------CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHH
Confidence 4578899999 999999999999876653 2344443332
Q ss_pred --------------------cCChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCC
Q psy8428 117 --------------------DEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (328)
Q Consensus 117 --------------------~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~ 171 (328)
+++.++.+++|++++|++++...+| .+....|..+.++|.++|++..+.
T Consensus 166 ~~~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G------~~~~~~G~~~~~~L~~~l~~~~~~ 234 (241)
T 1v58_A 166 GGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKEN------TLQQAVGLPDQKTLNIIMGNKLQH 234 (241)
T ss_dssp TTCCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTT------EEEEEESSCCHHHHHHHTTC----
T ss_pred hccCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC------CEEEecCCCCHHHHHHHHHHHHHh
Confidence 2345678999999999999876432 223334667899999999876653
No 204
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.98 E-value=5.2e-06 Score=64.26 Aligned_cols=64 Identities=16% Similarity=0.227 Sum_probs=46.2
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC-------hhhHHHc
Q psy8428 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG-------SDVFQML 126 (328)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~-------~~lf~~l 126 (328)
+.+++.+. . ..+++|+++ ||++|+.+.|.+++.+..+ ++ |..+|++++ .++.+.+
T Consensus 3 ~~~~~~i~-~----~~v~~f~~~----~C~~C~~~~~~L~~~~~~~-------~~--~~~vdi~~~~~~~~~~~~l~~~~ 64 (105)
T 1kte_A 3 AFVNSKIQ-P----GKVVVFIKP----TCPFCRKTQELLSQLPFKE-------GL--LEFVDITATSDTNEIQDYLQQLT 64 (105)
T ss_dssp HHHHHHCC-T----TCEEEEECS----SCHHHHHHHHHHHHSCBCT-------TS--EEEEEGGGSTTHHHHHHHHHHHH
T ss_pred hHHHhhcc-c----CCEEEEEcC----CCHhHHHHHHHHHHcCCCC-------Cc--cEEEEccCCCCHHHHHHHHHHHh
Confidence 34566652 2 136779999 9999999999998765332 12 556777765 2577889
Q ss_pred CCCcCceEE
Q psy8428 127 RLNTAPIFM 135 (328)
Q Consensus 127 ~v~svP~l~ 135 (328)
|++++|+++
T Consensus 65 g~~~vP~i~ 73 (105)
T 1kte_A 65 GARTVPRVF 73 (105)
T ss_dssp SCCCSCEEE
T ss_pred CCCCcCeEE
Confidence 999999984
No 205
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=97.95 E-value=4.3e-05 Score=67.10 Aligned_cols=43 Identities=7% Similarity=-0.058 Sum_probs=36.3
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD 117 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~ 117 (328)
+..++|.|||+ ||++|++..|+++++++.|.. ..+.+..++++
T Consensus 47 Gk~vlv~Fwat----wC~~C~~e~p~l~~l~~~~~~-----~g~~vv~v~~d 89 (208)
T 2f8a_A 47 GKVLLIENVAS----LGGTTVRDYTQMNELQRRLGP-----RGLVVLGFPCN 89 (208)
T ss_dssp TSEEEEEEECS----SSTTHHHHHHHHHHHHHHHGG-----GTEEEEEEECC
T ss_pred CCEEEEEEECC----CCccHHHHHHHHHHHHHHccC-----CCeEEEEEECC
Confidence 34699999999 999999999999999999863 24778888775
No 206
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.92 E-value=8.2e-05 Score=61.94 Aligned_cols=112 Identities=16% Similarity=0.278 Sum_probs=81.0
Q ss_pred CeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC--cCChhhHH
Q psy8428 47 AVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF--DEGSDVFQ 124 (328)
Q Consensus 47 ~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~--~~~~~lf~ 124 (328)
-|.++|.+|+.++. +++.+- .+++|.... -..=..+.+.++++|+.+. +++.|+.+|. +++....+
T Consensus 15 LV~e~t~en~~~~~-~~~~~~-~~l~f~~~~----~~~~~~~~~~~~~vAk~fk------gki~Fv~vd~~~~~~~~~l~ 82 (147)
T 3bj5_A 15 LVIEFTEQTAPKIF-GGEIKT-HILLFLPKS----VSDYDGKLSNFKTAAESFK------GKILFAFIDSDHTDNQRILE 82 (147)
T ss_dssp CEEECCTTTHHHHH-SSSCCE-EEEEECCTT----SSSHHHHHHHHHHHHHTTT------TTCEEEEECTTCGGGHHHHH
T ss_pred eeEEeccccHHHHh-cCCCce-EEEEEecCC----cHhHHHHHHHHHHHHHHcC------CceEEEEEecchHhHHHHHH
Confidence 49999999998885 454322 223355431 1225578999999999986 5899999999 66778999
Q ss_pred HcCCCc--CceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCcc
Q psy8428 125 MLRLNT--APIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (328)
Q Consensus 125 ~l~v~s--vP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~i 173 (328)
.||++. +|++.++...+. ...|....+..+++.+.+|+++.+.-.+
T Consensus 83 ~fGl~~~~~P~v~i~~~~~~---~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL 130 (147)
T 3bj5_A 83 FFGLKKEECPAVRLITLEEE---MTKYKPESEELTAERITEFCHRFLEGKI 130 (147)
T ss_dssp HTTCCGGGCSEEEEEECSSS---CEEECCSCCCCCHHHHHHHHHHHHTTCS
T ss_pred HcCCCcccCCEEEEEecccc---cccCCCCcccCCHHHHHHHHHHHHcCCc
Confidence 999996 999999875211 1234433356789999999999886554
No 207
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=97.88 E-value=4.5e-05 Score=65.13 Aligned_cols=42 Identities=10% Similarity=0.000 Sum_probs=35.4
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD 117 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~ 117 (328)
..++|.|+|+ ||++|+...|+++++++.+.. .++.+..++++
T Consensus 50 k~vlv~F~at----wC~~C~~~~~~l~~l~~~~~~-----~~v~vv~is~d 91 (185)
T 2gs3_A 50 FVCIVTNVAS----QGGKTEVNYTQLVDLHARYAE-----CGLRILAFPCN 91 (185)
T ss_dssp SEEEEEEECS----SSTTHHHHHHHHHHHHHHHGG-----GTEEEEEEECC
T ss_pred CEEEEEEecC----CCCchHHHHHHHHHHHHHhhc-----CCeEEEEEECc
Confidence 4689999999 999999999999999999863 24777777764
No 208
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=97.88 E-value=2.8e-05 Score=66.08 Aligned_cols=43 Identities=9% Similarity=0.126 Sum_probs=36.0
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD 117 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~ 117 (328)
+..++|.|||+ ||++|+...|+++++++.|.. ..+.+..+.++
T Consensus 38 Gk~vlv~F~at----wC~~C~~~~p~l~~l~~~~~~-----~~~~vi~is~d 80 (180)
T 3kij_A 38 GKVSLVVNVAS----DCQLTDRNYLGLKELHKEFGP-----SHFSVLAFPCN 80 (180)
T ss_dssp TSEEEEEEECS----SSTTHHHHHHHHHHHHHHHTT-----TSEEEEEEECC
T ss_pred CCEEEEEEEec----CCCCcHHHHHHHHHHHHHhcc-----CCeEEEEEECC
Confidence 34799999999 999999999999999999862 34777777654
No 209
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.85 E-value=3.3e-05 Score=64.44 Aligned_cols=86 Identities=9% Similarity=0.025 Sum_probs=59.6
Q ss_pred cEEEEEeeCCCCCC-CccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc-----------------------CChhhH
Q psy8428 68 SAIVMFTALAPQRN-CHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-----------------------EGSDVF 123 (328)
Q Consensus 68 ~vvV~ftA~~~~~~-C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~-----------------------~~~~lf 123 (328)
.+++.|+++ | |++|+...|.++++++.+ . ++.+..++.| .+.++.
T Consensus 46 ~~vl~F~~~----~~C~~C~~~~~~l~~l~~~~-~------~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 114 (167)
T 2jsy_A 46 VTIISVIPS----IDTGVCDAQTRRFNEEAAKL-G------DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFG 114 (167)
T ss_dssp CEEEEECSC----STTSHHHHTHHHHHHHHHHH-S------SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHH
T ss_pred eEEEEEecC----CCCCchHHHHHHHHHHHHHc-C------CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHH
Confidence 589999999 9 999999999999999987 2 2444444443 235677
Q ss_pred HHcCCCc------CceEEEecCCCCCCCCCceeeee----cccCHHHHHHHHHhh
Q psy8428 124 QMLRLNT------APIFMHFPAKGKPKPSDTLDIQR----VGYSAEAIVKWIADR 168 (328)
Q Consensus 124 ~~l~v~s------vP~l~~f~p~g~~~~~~~~~~~~----~~~~a~~l~~fl~~~ 168 (328)
+.|++.. .|+.+++.+.|+. .+.... ...+.+++.+.|++.
T Consensus 115 ~~~~v~~~~~g~~~p~~~lid~~G~i----~~~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 115 EAFGVYIKELRLLARSVFVLDENGKV----VYAEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp HHTTCBBTTTCSBCCEEEEECTTSCE----EEEEECSBTTSCCCSHHHHHHHHHH
T ss_pred HHhCCccccCCceeeEEEEEcCCCcE----EEEEecCCcCCCCCHHHHHHHHHHh
Confidence 8899887 4999998776542 111110 112457788887764
No 210
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.83 E-value=4.8e-05 Score=63.10 Aligned_cols=88 Identities=9% Similarity=0.091 Sum_probs=61.1
Q ss_pred cEEEEEee-CCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc---------------------CChhhHHH
Q psy8428 68 SAIVMFTA-LAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD---------------------EGSDVFQM 125 (328)
Q Consensus 68 ~vvV~ftA-~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~---------------------~~~~lf~~ 125 (328)
.+++.||+ + ||++|+.-.|.++++.+.+.. ..+.+.-+..| ...++.+.
T Consensus 37 ~~vl~F~~~~----~c~~C~~~~~~l~~~~~~~~~-----~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (163)
T 3gkn_A 37 WLVIYFYPKD----STPGATTEGLDFNALLPEFDK-----AGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRA 107 (163)
T ss_dssp CEEEEECSCT----TSHHHHHHHHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHH
T ss_pred cEEEEEeCCC----CCCcHHHHHHHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHH
Confidence 58899997 8 999999999999999998863 23444444444 24467888
Q ss_pred cCCCc------------CceEEEecCCCCCCCCCceeee--ecccCHHHHHHHHHhh
Q psy8428 126 LRLNT------------APIFMHFPAKGKPKPSDTLDIQ--RVGYSAEAIVKWIADR 168 (328)
Q Consensus 126 l~v~s------------vP~l~~f~p~g~~~~~~~~~~~--~~~~~a~~l~~fl~~~ 168 (328)
||+.. .|+.+++.+.|... +.+. ......+++.+.+++.
T Consensus 108 ~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~----~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 108 FDVIKEKNMYGKQVLGIERSTFLLSPEGQVV----QAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp TTCEEEEEETTEEEEEECCEEEEECTTSCEE----EEECSCCSTTHHHHHHHHHHHH
T ss_pred hCCccccccccccccCcceEEEEECCCCeEE----EEEcCCCcccCHHHHHHHHHHH
Confidence 99987 99999998775431 1111 1123357777777654
No 211
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.83 E-value=2.9e-05 Score=67.38 Aligned_cols=94 Identities=18% Similarity=0.267 Sum_probs=59.5
Q ss_pred CccEEEEEeeCCCCCCCcc-chhhHHHHHHHHHHcccccCCCCcEEEEEEECcC--------------------------
Q psy8428 66 NYSAIVMFTALAPQRNCHI-CVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------------------------- 118 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~-C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~-------------------------- 118 (328)
+..++|.|+++ ||++ |+...|.++++.+.+.+..+ +++.+..+++|.
T Consensus 41 Gk~vlv~F~at----~C~~vC~~~~~~l~~l~~~~~~~~~--~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~ 114 (200)
T 2b7k_A 41 GKFSIIYFGFS----NCPDICPDELDKLGLWLNTLSSKYG--ITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTF 114 (200)
T ss_dssp TSCEEEEEECT----TCCSHHHHHHHHHHHHHHHHHHHHC--CCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCH
T ss_pred CCEEEEEEECC----CCcchhHHHHHHHHHHHHHHHHhhC--CceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCH
Confidence 34689999999 9998 99999999998887753211 245555555542
Q ss_pred --ChhhHHHcCCC-cCc---------------eEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 119 --GSDVFQMLRLN-TAP---------------IFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 119 --~~~lf~~l~v~-svP---------------~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
..++.+.||+. +.| +.+++.+.|+. .....+..+.+++.+.|.+.+.
T Consensus 115 d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i-----~~~~~g~~~~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 115 DEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQF-----VDALGRNYDEKTGVDKIVEHVK 179 (200)
T ss_dssp HHHHHHHHHTTC--------------CTTTCCCEEEECTTSCE-----EEEECTTCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcE-----EEEeCCCCCHHHHHHHHHHHHH
Confidence 23577888887 444 66777665432 2222344566666666666554
No 212
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.82 E-value=8.1e-06 Score=64.70 Aligned_cols=55 Identities=20% Similarity=0.299 Sum_probs=43.0
Q ss_pred EEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCCh-------hhHHHcCCCcCceEEE
Q psy8428 69 AIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS-------DVFQMLRLNTAPIFMH 136 (328)
Q Consensus 69 vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~-------~lf~~l~v~svP~l~~ 136 (328)
.+++|+++ ||++|+.+++.+++.+.. .++ |..+|+++++ ++.+.+|++++|++++
T Consensus 20 ~vv~f~~~----~Cp~C~~~~~~L~~~~~~-------~~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i 81 (114)
T 2hze_A 20 KVTIFVKY----TCPFCRNALDILNKFSFK-------RGA--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF 81 (114)
T ss_dssp CEEEEECT----TCHHHHHHHHHHTTSCBC-------TTS--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE
T ss_pred CEEEEEeC----CChhHHHHHHHHHHcCCC-------cCc--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE
Confidence 57789999 999999999988754321 122 7788998764 7888999999999854
No 213
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=97.80 E-value=0.00018 Score=59.93 Aligned_cols=92 Identities=14% Similarity=0.136 Sum_probs=62.3
Q ss_pred ccEEEEEeeCCCCCCCc-cchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC---Ch----------------------
Q psy8428 67 YSAIVMFTALAPQRNCH-ICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE---GS---------------------- 120 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~-~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~---~~---------------------- 120 (328)
..+++.|+++ ||+ +|+...|+++++.+.+... .+++.+..+++|. ++
T Consensus 34 k~vll~f~~~----~C~~~C~~~~~~l~~l~~~~~~~---~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d 106 (174)
T 1xzo_A 34 EVWLADFIFT----NCETICPPMTAHMTDLQKKLKAE---NIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTG 106 (174)
T ss_dssp CCEEEEEECS----CCSSCCCSHHHHHHHHHHHHHHT---TCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBC
T ss_pred CEEEEEEEcC----CCcchhHHHHHHHHHHHHHhhhc---CCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeC
Confidence 3589999999 999 9999999999999988642 1147777777651 11
Q ss_pred ---hhHHH----------------cCCCcCceEEEecCCCCCCCCCceeeeeccc--CHHHHHHHHHhhcC
Q psy8428 121 ---DVFQM----------------LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGY--SAEAIVKWIADRTD 170 (328)
Q Consensus 121 ---~lf~~----------------l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~--~a~~l~~fl~~~t~ 170 (328)
++.+. +++.+.|+.+++.+.|+. .....+.. +.+++.+.|++.+.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i-----~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 107 YSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKV-----LKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp SCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEE-----EEEEESSSSCCHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeE-----EEEEcCCCCCCHHHHHHHHHHHHh
Confidence 12222 345778888888766432 22223333 47899999987654
No 214
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.80 E-value=4.8e-05 Score=67.26 Aligned_cols=89 Identities=9% Similarity=0.088 Sum_probs=64.4
Q ss_pred CccEEEEEee-CCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC--------------------------
Q psy8428 66 NYSAIVMFTA-LAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------------------------- 118 (328)
Q Consensus 66 ~y~vvV~ftA-~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~-------------------------- 118 (328)
+..++|.||+ + ||++|+...|+++++.+.+.. .++.+.-|..|.
T Consensus 69 Gk~vll~F~a~~----wC~~C~~~~p~l~~l~~~~~~-----~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~ 139 (222)
T 3ztl_A 69 GKYVVLFFYPAD----FTFVCPTEIIAFSDQVEEFNS-----RNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLA 139 (222)
T ss_dssp TSEEEEEECSCS----SCSHHHHHHHHHHHTHHHHHT-----TTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEE
T ss_pred CCeEEEEEECCC----CCCchHHHHHHHHHHHHHHHH-----CCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEe
Confidence 3468999996 8 999999999999999999863 346666666653
Q ss_pred --ChhhHHHcCCC------cCceEEEecCCCCCCCCCceeeeec----ccCHHHHHHHHHhh
Q psy8428 119 --GSDVFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQRV----GYSAEAIVKWIADR 168 (328)
Q Consensus 119 --~~~lf~~l~v~------svP~l~~f~p~g~~~~~~~~~~~~~----~~~a~~l~~fl~~~ 168 (328)
+.++.+.|++. ++|+.+++.+.|+.. +.. .+ ....+++.+.|++.
T Consensus 140 D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~----~~~-~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 140 DRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILR----QIT-INDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp CSSSHHHHHTTCBCTTTSSBCEEEEEECTTSEEE----EEE-EECTTBCCCHHHHHHHHHHH
T ss_pred CCchHHHHHcCCeecCCCCccceEEEECCCCeEE----EEE-ecCCCCCCCHHHHHHHHHHh
Confidence 33678899999 999999998765421 111 12 23467777777653
No 215
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.76 E-value=6.5e-05 Score=63.62 Aligned_cols=88 Identities=13% Similarity=0.075 Sum_probs=60.0
Q ss_pred ccEEEEEeeCCCCCC-CccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc--------------C--------ChhhH
Q psy8428 67 YSAIVMFTALAPQRN-CHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD--------------E--------GSDVF 123 (328)
Q Consensus 67 y~vvV~ftA~~~~~~-C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~--------------~--------~~~lf 123 (328)
..+++.||++ | |++|+...|+++++.+. . ++.|..++.| + +.++.
T Consensus 45 k~vvl~F~~t----~~C~~C~~~~~~l~~l~~~-~-------~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 112 (175)
T 1xvq_A 45 KSVLLNIFPS----VDTPVCATSVRTFDERAAA-S-------GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFG 112 (175)
T ss_dssp SCEEEEECSC----CCSSCCCHHHHHHHHHHHH-T-------TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHH
T ss_pred CEEEEEEEeC----CCCchHHHHHHHHHHHHhh-c-------CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHH
Confidence 3689999999 8 99999999999999876 2 3555555554 1 35788
Q ss_pred HHcCCCcC---------ceEEEecCCCCCCCCCceeeeecc----cCHHHHHHHHHhhcC
Q psy8428 124 QMLRLNTA---------PIFMHFPAKGKPKPSDTLDIQRVG----YSAEAIVKWIADRTD 170 (328)
Q Consensus 124 ~~l~v~sv---------P~l~~f~p~g~~~~~~~~~~~~~~----~~a~~l~~fl~~~t~ 170 (328)
+.|++... |+.+++.+.|+. .+....++ .+.+++.+.+.+..|
T Consensus 113 ~~~gv~~~~~~~~g~~~p~~~lid~~G~I----~~~~~g~~~~~~~~~~~~l~~l~~~~~ 168 (175)
T 1xvq_A 113 EDYGVTIADGPMAGLLARAIVVIGADGNV----AYTELVPEIAQEPNYEAALAALGATSG 168 (175)
T ss_dssp HHTTCBBCSSTTTTSBCSEEEEECTTSBE----EEEEECSBTTCCCCHHHHHHHHHHTC-
T ss_pred HHhCCcccccccCCcccceEEEECCCCeE----EEEEECCCcCCCCCHHHHHHHHHhhcC
Confidence 99999987 898888776532 12221111 245667777766555
No 216
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=97.70 E-value=0.00039 Score=56.20 Aligned_cols=96 Identities=13% Similarity=0.129 Sum_probs=72.4
Q ss_pred CeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHH
Q psy8428 47 AVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (328)
Q Consensus 47 ~VI~L~~-~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (328)
.+.+|++ +.+++++. . +-.++|-|.++ ||.+| .++|.++|+.. +++.|+..+ +++++++
T Consensus 22 ~~~~i~s~~e~e~fi~-~--~~v~VVGfF~~----~~~~~---~~~F~~~A~~~-------~d~~F~~t~---~~~v~~~ 81 (124)
T 2l4c_A 22 EPTWLTDVPAAMEFIA-A--TEVAVIGFFQD----LEIPA---VPILHSMVQKF-------PGVSFGIST---DSEVLTH 81 (124)
T ss_dssp CCEECCSHHHHHHHHH-T--SSEEEEEECSC----TTSTH---HHHHHHHHHHC-------TTSEEEEEC---CHHHHHH
T ss_pred cceEcCCHHHHHHHHh-c--CCCEEEEEECC----CCChh---HHHHHHHHHhC-------CCceEEEEC---hHHHHHH
Confidence 3566754 67888874 3 33577888898 99888 78999999987 258888774 3779999
Q ss_pred cCCCcCceEEEecCCCCCCCCCceeeeec----ccCHHHHHHHHHhh
Q psy8428 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRV----GYSAEAIVKWIADR 168 (328)
Q Consensus 126 l~v~svP~l~~f~p~g~~~~~~~~~~~~~----~~~a~~l~~fl~~~ 168 (328)
++++ .|++.+|++.. +....+ .+ ..+.++|.+||+.+
T Consensus 82 ~~v~-~~~vvlfkkfd----e~~~~~-~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 82 YNIT-GNTICLFRLVD----NEQLNL-EDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp TTCC-SSCEEEEETTT----TEEEEE-CHHHHTTCCHHHHHHHHHHH
T ss_pred cCCC-CCeEEEEEcCC----CCceee-cCcccCCCCHHHHHHHHHHh
Confidence 9999 89999999752 122233 23 57999999999875
No 217
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.67 E-value=4.7e-05 Score=57.37 Aligned_cols=69 Identities=17% Similarity=0.314 Sum_probs=51.7
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc-----CC----hhhHHHcCCCcCceEEEecCC
Q psy8428 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-----EG----SDVFQMLRLNTAPIFMHFPAK 140 (328)
Q Consensus 70 vV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~-----~~----~~lf~~l~v~svP~l~~f~p~ 140 (328)
+++|+++ ||++|+..++.+++..- -+-.+|++ +. +++.+.++..++|++++ ++
T Consensus 14 v~ly~~~----~Cp~C~~~~~~L~~~gi------------~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g 75 (92)
T 3ic4_A 14 VLMYGLS----TCPHCKRTLEFLKREGV------------DFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GD 75 (92)
T ss_dssp SEEEECT----TCHHHHHHHHHHHHHTC------------CCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TT
T ss_pred EEEEECC----CChHHHHHHHHHHHcCC------------CcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CC
Confidence 5779999 99999999998887542 23346666 33 66778899999999987 33
Q ss_pred CCCCCCCceeeeecccCHHHHHHHHH
Q psy8428 141 GKPKPSDTLDIQRVGYSAEAIVKWIA 166 (328)
Q Consensus 141 g~~~~~~~~~~~~~~~~a~~l~~fl~ 166 (328)
+. .++.+.+++.++|+
T Consensus 76 -------~~---i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 76 -------KH---VLGYNEEKLKELIR 91 (92)
T ss_dssp -------EE---EESCCHHHHHHHHH
T ss_pred -------EE---EeCCCHHHHHHHhc
Confidence 11 36789999999885
No 218
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.66 E-value=0.00014 Score=62.23 Aligned_cols=41 Identities=10% Similarity=0.167 Sum_probs=33.1
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF 116 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~ 116 (328)
...+|+.|++. ||++|+.++|.++++++.+. +++.|....+
T Consensus 25 ~~~~i~~f~d~----~Cp~C~~~~~~l~~l~~~~~------~~v~~~~~p~ 65 (192)
T 3h93_A 25 GKIEVVELFWY----GCPHCYAFEPTIVPWSEKLP------ADVHFVRLPA 65 (192)
T ss_dssp TSEEEEEEECT----TCHHHHHHHHHHHHHHHTCC------TTEEEEEEEC
T ss_pred CCCEEEEEECC----CChhHHHhhHHHHHHHHhCC------CCeEEEEEeh
Confidence 44688999999 99999999999999998874 3566665554
No 219
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.66 E-value=0.00012 Score=56.12 Aligned_cols=77 Identities=16% Similarity=0.270 Sum_probs=57.0
Q ss_pred EEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHc-----CCCcCceEEEecCCCCC
Q psy8428 69 AIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML-----RLNTAPIFMHFPAKGKP 143 (328)
Q Consensus 69 vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l-----~v~svP~l~~f~p~g~~ 143 (328)
-|+.||.+ ||+.|+..+.-+++ ..+-|-.+|++++++..+.+ |-+++|++++ .+| .
T Consensus 5 ~I~vYs~~----~Cp~C~~aK~~L~~------------~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i-~Dg-~- 65 (92)
T 2lqo_A 5 ALTIYTTS----WCGYCLRLKTALTA------------NRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKF-ADG-S- 65 (92)
T ss_dssp CEEEEECT----TCSSHHHHHHHHHH------------TTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEE-TTS-C-
T ss_pred cEEEEcCC----CCHhHHHHHHHHHh------------cCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEE-eCC-E-
Confidence 36779999 99999998876553 24678899999987655443 7899999864 443 1
Q ss_pred CCCCceeeeecccCHHHHHHHHHhhcCCc
Q psy8428 144 KPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 144 ~~~~~~~~~~~~~~a~~l~~fl~~~t~~~ 172 (328)
. ..+.+.+++.++|++..|..
T Consensus 66 -----~---l~~~~~~el~~~L~el~gL~ 86 (92)
T 2lqo_A 66 -----T---LTNPSADEVKAKLVKIAGLE 86 (92)
T ss_dssp -----E---EESCCHHHHHHHHHHHHCCS
T ss_pred -----E---EeCCCHHHHHHHHHHhcCCc
Confidence 1 13567889999999988854
No 220
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.62 E-value=7.5e-05 Score=58.12 Aligned_cols=65 Identities=12% Similarity=0.166 Sum_probs=44.0
Q ss_pred hhHHHHHHcCCCCccEEEEEee-CCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChh----hHHHcCC
Q psy8428 54 QKYKEYIKNGPRNYSAIVMFTA-LAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD----VFQMLRL 128 (328)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~ftA-~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~----lf~~l~v 128 (328)
+.+++.+. .+ .+++ |++ +....||++|+.+.+.+++.. +-|..+|++++++ +.+.+|.
T Consensus 8 ~~~~~~i~-~~---~vvv-f~~g~~~~~~C~~C~~~~~~L~~~~------------i~~~~vdi~~~~~~~~~l~~~~g~ 70 (105)
T 2yan_A 8 ERLKVLTN-KA---SVML-FMKGNKQEAKCGFSKQILEILNSTG------------VEYETFDILEDEEVRQGLKAYSNW 70 (105)
T ss_dssp HHHHHHHT-SS---SEEE-EESBCSSSBCTTHHHHHHHHHHHHT------------CCCEEEEGGGCHHHHHHHHHHHTC
T ss_pred HHHHHHhc-cC---CEEE-EEecCCCCCCCccHHHHHHHHHHCC------------CCeEEEECCCCHHHHHHHHHHHCC
Confidence 34566653 22 3544 666 111129999999999887642 4577899998776 4455799
Q ss_pred CcCceEE
Q psy8428 129 NTAPIFM 135 (328)
Q Consensus 129 ~svP~l~ 135 (328)
.++|+++
T Consensus 71 ~~vP~v~ 77 (105)
T 2yan_A 71 PTYPQLY 77 (105)
T ss_dssp CSSCEEE
T ss_pred CCCCeEE
Confidence 9999984
No 221
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.59 E-value=6.4e-05 Score=61.09 Aligned_cols=50 Identities=20% Similarity=0.462 Sum_probs=39.1
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC---hh----hHHHcCCCcCceEE
Q psy8428 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG---SD----VFQMLRLNTAPIFM 135 (328)
Q Consensus 70 vV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~---~~----lf~~l~v~svP~l~ 135 (328)
+++|+++ ||++|+.+++.+++.. +-|..+|++.. ++ +.+.++++++|+++
T Consensus 29 vvvf~~~----~Cp~C~~~~~~L~~~~------------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~ 85 (130)
T 2cq9_A 29 VVIFSKT----SCSYCTMAKKLFHDMN------------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 85 (130)
T ss_dssp EEEEECS----SCSHHHHHHHHHHHHT------------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE
T ss_pred EEEEEcC----CChHHHHHHHHHHHcC------------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE
Confidence 4559999 9999999999988753 23456777765 43 77889999999985
No 222
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.57 E-value=3.8e-05 Score=61.40 Aligned_cols=64 Identities=13% Similarity=0.301 Sum_probs=46.2
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhh-HHHHHHHHHHcccccCCCCcEEEEEEECcCCh-------hhHHH
Q psy8428 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSA-SDEYTIVANSFRYSQMYSNKLFFILVDFDEGS-------DVFQM 125 (328)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~-~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~-------~lf~~ 125 (328)
+.+++.+... .+++|+++ ||++|+.+ ++.+++.+. +++-|..+|+++++ ++.+.
T Consensus 16 ~~~~~~i~~~-----~Vvvf~~~----~Cp~C~~alk~~L~~~~~---------~~i~~~~vdid~~~~~~~~~~~l~~~ 77 (118)
T 3c1r_A 16 KHVKDLIAEN-----EIFVASKT----YCPYCHAALNTLFEKLKV---------PRSKVLVLQLNDMKEGADIQAALYEI 77 (118)
T ss_dssp HHHHHHHHHS-----SEEEEECS----SCHHHHHHHHHHHTTSCC---------CGGGEEEEEGGGSTTHHHHHHHHHHH
T ss_pred HHHHHHHccC-----cEEEEEcC----CCcCHHHHHHHHHHHcCC---------CCCCeEEEECccCCChHHHHHHHHHH
Confidence 3455555322 36679999 99999998 887654331 23678889998764 58888
Q ss_pred cCCCcCceEE
Q psy8428 126 LRLNTAPIFM 135 (328)
Q Consensus 126 l~v~svP~l~ 135 (328)
+|.+++|+++
T Consensus 78 ~g~~tvP~vf 87 (118)
T 3c1r_A 78 NGQRTVPNIY 87 (118)
T ss_dssp HSCCSSCEEE
T ss_pred hCCCCcCEEE
Confidence 9999999983
No 223
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.57 E-value=5.2e-05 Score=68.81 Aligned_cols=93 Identities=14% Similarity=0.135 Sum_probs=65.6
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC---------------------------
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE--------------------------- 118 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~--------------------------- 118 (328)
.+.++++|+|+ ||++|....|.+.++++.+.+ .++.+.-+++|.
T Consensus 34 K~vVL~~fpa~----~CpvC~tEl~~l~~l~~ef~~-----~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~ 104 (249)
T 3a2v_A 34 KWFVLFSHPAD----FTPVCTTEFVSFARRYEDFQR-----LGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADP 104 (249)
T ss_dssp CEEEEECCSCT----TCHHHHHHHHHHHHTHHHHHH-----TTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECT
T ss_pred CEEEEEEEcCC----CCcChHHHHHHHHHHHHHHHh-----CCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECC
Confidence 34566788999 999999999999999998864 346666666643
Q ss_pred ChhhHHHcCCC-------cCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhh
Q psy8428 119 GSDVFQMLRLN-------TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (328)
Q Consensus 119 ~~~lf~~l~v~-------svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~ 168 (328)
+.++.+.||+. ++|+++++.+.|.......+.. ..+++.+++.+.|.+.
T Consensus 105 ~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~-~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 105 QGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPM-ELGRLVDEILRIVKAL 160 (249)
T ss_dssp TSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECT-TBCCCHHHHHHHHHHH
T ss_pred chHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCC-cccchhHHHHHHHHHH
Confidence 35688899997 9999999987654310000110 1245788888888654
No 224
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.56 E-value=0.00015 Score=62.19 Aligned_cols=42 Identities=14% Similarity=0.188 Sum_probs=35.9
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD 117 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~ 117 (328)
...+++.|+++ ||++|+.+.|+++++++.+. +++.|..++++
T Consensus 25 ~~~~vv~f~d~----~Cp~C~~~~~~l~~l~~~~~------~~v~~~~~~~~ 66 (195)
T 3hd5_A 25 GKIEVLEFFAY----TCPHCAAIEPMVEDWAKTAP------QDVVLKQVPIA 66 (195)
T ss_dssp TCEEEEEEECT----TCHHHHHHHHHHHHHHHTCC------TTEEEEEEECC
T ss_pred CCeEEEEEECC----CCccHHHhhHHHHHHHHHCC------CCeEEEEEecc
Confidence 45688999999 99999999999999998874 36888888875
No 225
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.56 E-value=8.1e-05 Score=61.95 Aligned_cols=61 Identities=20% Similarity=0.435 Sum_probs=44.2
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC---h----hhHHHc
Q psy8428 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG---S----DVFQML 126 (328)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~---~----~lf~~l 126 (328)
+.+++.+.+. . +++|+++ ||++|+.+.+.++++. +-|..+|++.. + ++.+.+
T Consensus 40 ~~~~~~i~~~----~-Vvvf~~~----~Cp~C~~~k~~L~~~~------------i~~~~vdId~~~~~~~~~~~L~~~~ 98 (146)
T 2ht9_A 40 NQIQETISDN----C-VVIFSKT----SCSYCTMAKKLFHDMN------------VNYKVVELDLLEYGNQFQDALYKMT 98 (146)
T ss_dssp HHHHHHHHHC----S-EEEEECT----TCHHHHHHHHHHHHHT------------CCCEEEEGGGCTTHHHHHHHHHHHH
T ss_pred HHHHHHhcCC----C-EEEEECC----CChhHHHHHHHHHHcC------------CCeEEEECccCcCCHHHHHHHHHHh
Confidence 4566665422 2 4559999 9999999999988763 22455677654 4 377899
Q ss_pred CCCcCceEE
Q psy8428 127 RLNTAPIFM 135 (328)
Q Consensus 127 ~v~svP~l~ 135 (328)
|+.++|+++
T Consensus 99 g~~tvP~if 107 (146)
T 2ht9_A 99 GERTVPRIF 107 (146)
T ss_dssp SCCCSCEEE
T ss_pred CCCCcCeEE
Confidence 999999995
No 226
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.56 E-value=9.3e-05 Score=57.34 Aligned_cols=54 Identities=15% Similarity=0.203 Sum_probs=42.1
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHc-----CCCcCceEE
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML-----RLNTAPIFM 135 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l-----~v~svP~l~ 135 (328)
+-.-+++|+++ ||+.|+.+++.+++.. +-|..+|++++++..+.+ |..++|+++
T Consensus 14 ~~~~v~vy~~~----~Cp~C~~ak~~L~~~~------------i~y~~idI~~~~~~~~~l~~~~~g~~~vP~if 72 (99)
T 3qmx_A 14 VSAKIEIYTWS----TCPFCMRALALLKRKG------------VEFQEYCIDGDNEAREAMAARANGKRSLPQIF 72 (99)
T ss_dssp CCCCEEEEECT----TCHHHHHHHHHHHHHT------------CCCEEEECTTCHHHHHHHHHHTTTCCCSCEEE
T ss_pred CCCCEEEEEcC----CChhHHHHHHHHHHCC------------CCCEEEEcCCCHHHHHHHHHHhCCCCCCCEEE
Confidence 34457789999 9999999999888653 446678999877665554 999999984
No 227
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.55 E-value=7.4e-05 Score=56.04 Aligned_cols=52 Identities=23% Similarity=0.328 Sum_probs=42.0
Q ss_pred EEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc--CChhhHHHc-CCCcCceEEE
Q psy8428 69 AIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD--EGSDVFQML-RLNTAPIFMH 136 (328)
Q Consensus 69 vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~--~~~~lf~~l-~v~svP~l~~ 136 (328)
-+++|+++ ||++|+.+++.+++.. +-|..+|++ ..+++.+.+ ++.++|++++
T Consensus 7 ~v~~y~~~----~C~~C~~~~~~L~~~~------------i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~~ 61 (89)
T 2klx_A 7 EIILYTRP----NCPYCKRARDLLDKKG------------VKYTDIDASTSLRQEMVQRANGRNTFPQIFI 61 (89)
T ss_dssp CEEEESCS----CCTTTHHHHHHHHHHT------------CCEEEECSCHHHHHHHHHHHHSSCCSCEEEE
T ss_pred eEEEEECC----CChhHHHHHHHHHHcC------------CCcEEEECCHHHHHHHHHHhCCCCCcCEEEE
Confidence 46789999 9999999999887642 346678887 567788889 9999999853
No 228
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.54 E-value=0.00088 Score=63.84 Aligned_cols=122 Identities=9% Similarity=0.009 Sum_probs=86.1
Q ss_pred hHHHHHHHHhhhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCC-ccchhhHHHHHHHHHHcccccCCCCcEE
Q psy8428 32 LGDRVLHLSEMNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNC-HICVSASDEYTIVANSFRYSQMYSNKLF 110 (328)
Q Consensus 32 ~~~~~~~L~~l~~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C-~~C~~~~pef~~vA~s~~~~~~~~~~v~ 110 (328)
..+.+.+......-.-+.++|.+|+.++. +++ ..++++|..+ +| ..|+.+..+++++|+.+. +++.
T Consensus 205 ~~~~l~~fi~~~~~p~v~elt~~~~~~~~-~~~--~~~~v~f~~~----~~~~~~~~~~~~~~~~~~~~~------~~i~ 271 (382)
T 2r2j_A 205 NFDVTYNWIQDKCVPLVREITFENGEELT-EEG--LPFLILFHMK----EDTESLEIFQNEVARQLISEK------GTIN 271 (382)
T ss_dssp CHHHHHHHHHHHHSCSSEECCHHHHHHHH-TTC--CCEEEEEECT----TCCHHHHHHHHHHHHHTGGGT------TTSE
T ss_pred CHHHHHHHHHhcccCceEecChhhHHHHh-cCC--CcEEEEEecC----CchHHHHHHHHHHHHHHHHhC------CeeE
Confidence 44555665554445569999999999875 343 3567778777 66 346666666666665553 5799
Q ss_pred EEEEECcCChhhHHHcCCC--cCceEEEecCCCCCCCCCceeee--ecccCHHHHHHHHHhhcCCc
Q psy8428 111 FILVDFDEGSDVFQMLRLN--TAPIFMHFPAKGKPKPSDTLDIQ--RVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 111 F~~vD~~~~~~lf~~l~v~--svP~l~~f~p~g~~~~~~~~~~~--~~~~~a~~l~~fl~~~t~~~ 172 (328)
|+.+|.++.+...+.+|++ ..|.+.++..+ ..|.+. .+..+++.+.+|+++...-.
T Consensus 272 f~~id~~~~~~~~~~~gl~~~~~P~i~i~~~~------~~y~~~~~~~~~~~~~i~~F~~d~~~Gk 331 (382)
T 2r2j_A 272 FLHADCDKFRHPLLHIQKTPADCPVIAIDSFR------HMYVFGDFKDVLIPGKLKQFVFDLHSGK 331 (382)
T ss_dssp EEEEETTTTHHHHHHTTCCGGGCSEEEEECSS------CEEECCCSGGGGSTTHHHHHHHHHHHTT
T ss_pred EEEEchHHhHHHHHHcCCCccCCCEEEEEcch------hcCCCCccccccCHHHHHHHHHHHHCCC
Confidence 9999999999999999998 68999988653 113221 23346789999998876533
No 229
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.48 E-value=0.00067 Score=60.92 Aligned_cols=117 Identities=12% Similarity=0.097 Sum_probs=80.1
Q ss_pred CCeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH
Q psy8428 46 KAVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (328)
Q Consensus 46 ~~VI~L~~-~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (328)
.+|.+|++ +++++++.++ .+ .++|-|.++ + |.+..++|.++|+.+. +++.|+.. .++++++
T Consensus 6 P~v~~l~s~~~~~~~~~~~-~~-v~vVgff~~----~---~~~~~~~F~~~A~~lr------~~~~F~~t---~~~~v~~ 67 (250)
T 3ec3_A 6 PPSKEILTLKQVQEFLKDG-DD-VVILGVFQG----V---GDPGYLQYQDAANTLR------EDYKFHHT---FSTEIAK 67 (250)
T ss_dssp CSSEECCCHHHHHHHHHHC-SS-CEEEEECSC----T---TCHHHHHHHHHHHHHT------TTCCEEEE---CCHHHHH
T ss_pred CCceecCCHHHHHHHHhcC-CC-eEEEEEEcC----C---CchHHHHHHHHHHhhh------cCcEEEEE---CcHHHHH
Confidence 45888976 7888886531 12 356666666 5 6788999999999986 46778875 4678899
Q ss_pred HcCCCcCceEEEecCCCCC--CCCCceeeee-cccCHHHHHHHHHhhcCCcceeeCCCCC
Q psy8428 125 MLRLNTAPIFMHFPAKGKP--KPSDTLDIQR-VGYSAEAIVKWIADRTDIQIRVFRPPNY 181 (328)
Q Consensus 125 ~l~v~svP~l~~f~p~g~~--~~~~~~~~~~-~~~~a~~l~~fl~~~t~~~i~i~~p~~~ 181 (328)
+++++. |++++|+|+... -++....+.. +..+.++|.+|++++.-.-+.-..+.|+
T Consensus 68 ~~~v~~-p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~ 126 (250)
T 3ec3_A 68 FLKVSL-GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSND 126 (250)
T ss_dssp HHTCCS-SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTTTH
T ss_pred HcCCCC-CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCccch
Confidence 999998 999999984210 0122233322 4688999999999886444433344443
No 230
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.44 E-value=0.0009 Score=60.01 Aligned_cols=127 Identities=13% Similarity=0.158 Sum_probs=85.3
Q ss_pred CCchHHHHHHHHhhhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCcc-chhhHHHHHHHHHHcccccCCCC
Q psy8428 29 SLSLGDRVLHLSEMNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHI-CVSASDEYTIVANSFRYSQMYSN 107 (328)
Q Consensus 29 ~~~~~~~~~~L~~l~~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~-C~~~~pef~~vA~s~~~~~~~~~ 107 (328)
|+...+.+.+......-.-|.++|.+|+.++ .++ .+++.|...+.. .+.- ...+...++++|+.+... .+
T Consensus 97 g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~-~~~----~~~v~~~~~~~~-~~~~~~~~~~~~~~~vA~~~~~k---~~ 167 (252)
T 2h8l_A 97 QKMTSGKIKKFIQENIFGICPHMTEDNKDLI-QGK----DLLIAYYDVDYE-KNAKGSNYWRNRVMMVAKKFLDA---GH 167 (252)
T ss_dssp SSCCHHHHHHHHHHHSSCSSCEECTTTHHHH-SSS----SEEEEEECCBTT-TBHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred CCcCHHHHHHHHHhcccCCeeecccccHhhh-cCC----CeEEEEeecchh-hcchhHHHHHHHHHHHHHHcccc---Cc
Confidence 3344555666655444456999999999886 322 245555543110 0111 225888999999998731 13
Q ss_pred cEEEEEEECcCChhhHHHcCC----CcCceEEEecCCCCCCCCCceeeeecccCHHH--HHHHHHhhcC
Q psy8428 108 KLFFILVDFDEGSDVFQMLRL----NTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEA--IVKWIADRTD 170 (328)
Q Consensus 108 ~v~F~~vD~~~~~~lf~~l~v----~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~--l~~fl~~~t~ 170 (328)
.+.|+.+|.++.+.+.+.||+ ...|.+.++...+ ..|.. .+..+.+. |.+|+++...
T Consensus 168 ~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~-----~ky~~-~~~~t~~~~~i~~F~~~~~~ 230 (252)
T 2h8l_A 168 KLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKG-----EKFVM-QEEFSRDGKALERFLQDYFD 230 (252)
T ss_dssp CCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTS-----CEEEC-CSCCCTTSHHHHHHHHHHHH
T ss_pred eEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcC-----cEecC-CcccCcchHHHHHHHHHHHC
Confidence 499999999999889999999 3699999996431 34544 25567777 9999988764
No 231
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.40 E-value=0.0016 Score=58.32 Aligned_cols=115 Identities=16% Similarity=0.184 Sum_probs=77.5
Q ss_pred CCeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH
Q psy8428 46 KAVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (328)
Q Consensus 46 ~~VI~L~~-~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (328)
.++.+|++ +..++++. . .+ .++|.|.++ | |....++|.++|+.+. +++.|+.+ .++++++
T Consensus 6 P~v~~l~s~~~~~~~l~-~-~~-v~vvgff~~----~---~~~~~~~f~~~A~~lr------~~~~F~~~---~~~~v~~ 66 (252)
T 2h8l_A 6 PASVPLRTEEEFKKFIS-D-KD-ASIVGFFDD----S---FSEAHSEFLKAASNLR------DNYRFAHT---NVESLVN 66 (252)
T ss_dssp CCEEECCSHHHHHHHHT-S-SS-CEEEEEESC----T---TSHHHHHHHHHHHHTT------TTSCEEEE---CCHHHHH
T ss_pred CCceeecCHHHHHHHhh-c-CC-eEEEEEECC----C---CChHHHHHHHHHHhcc------cCcEEEEE---ChHHHHH
Confidence 45889965 56666653 3 23 355656566 6 6677889999999986 46778777 3577999
Q ss_pred HcCCCcCceEEEecCCCCCC--CCCceeeeecccCHHHHHHHHHhhcCCcceeeCCCC
Q psy8428 125 MLRLNTAPIFMHFPAKGKPK--PSDTLDIQRVGYSAEAIVKWIADRTDIQIRVFRPPN 180 (328)
Q Consensus 125 ~l~v~svP~l~~f~p~g~~~--~~~~~~~~~~~~~a~~l~~fl~~~t~~~i~i~~p~~ 180 (328)
+++++. |++++|+|+.... ++....++.|..+.++|.+|++++.-..+.-..+.|
T Consensus 67 ~~~~~~-p~i~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n 123 (252)
T 2h8l_A 67 EYDDNG-EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDN 123 (252)
T ss_dssp HHCSSS-EEEEEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTT
T ss_pred HhCCCC-CcEEEEcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeeccccc
Confidence 999997 9999999852111 112223313667999999999987654443333444
No 232
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.35 E-value=0.001 Score=58.88 Aligned_cols=103 Identities=11% Similarity=0.154 Sum_probs=63.7
Q ss_pred CccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC----------------------------
Q psy8428 66 NYSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF---------------------------- 116 (328)
Q Consensus 66 ~y~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~---------------------------- 116 (328)
+..+++.|| |+ ||++|+.-.|.++++.+.+.+. ++.+.-+..
T Consensus 56 Gk~vvl~F~pat----wCp~C~~e~p~l~~l~~~~~~~-----~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~ 126 (221)
T 2c0d_A 56 QKYCCLLFYPLN----YTFVCPTEIIEFNKHIKDFENK-----NVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVS 126 (221)
T ss_dssp TCEEEEEECCCC----TTTCCHHHHHHHHHTHHHHHHT-----TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEE
T ss_pred CCeEEEEEEcCC----CCCchHHHHHHHHHHHHHHHHC-----CCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEE
Confidence 346899999 99 9999999999999999887531 233322222
Q ss_pred cCChhhHHHcCC-----CcCceEEEecCCCCCCCCCceeeeec----ccCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8428 117 DEGSDVFQMLRL-----NTAPIFMHFPAKGKPKPSDTLDIQRV----GYSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (328)
Q Consensus 117 ~~~~~lf~~l~v-----~svP~l~~f~p~g~~~~~~~~~~~~~----~~~a~~l~~fl~~~t~~~-i~i~~p~~~~ 182 (328)
|...++.+.||+ ..+|+.+++.+.|... +.. .+ +.+.+++.+.|++..... -.+.-|.+|.
T Consensus 127 D~~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~----~~~-~g~~~~~~~~~ell~~l~~L~~~~~~~~~cp~~W~ 197 (221)
T 2c0d_A 127 DINKDISKNYNVLYDNSFALRGLFIIDKNGCVR----HQT-VNDLPIGRNVQEVLRTIDSIIHVDTSGEVCPINWK 197 (221)
T ss_dssp CTTSHHHHHTTCEETTTEECEEEEEECTTSBEE----EEE-EECTTCCCCHHHHHHHHHHHHHHHHHCCSCC----
T ss_pred CCchHHHHHcCCcccCCCccceEEEECCCCeEE----EEE-ecCCCCCCCHHHHHHHHHHHhhhhcCCCcCCCCCC
Confidence 234467788888 4789999998765421 111 12 346788888887643211 1334467774
No 233
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.33 E-value=0.00087 Score=55.30 Aligned_cols=57 Identities=9% Similarity=0.109 Sum_probs=41.5
Q ss_pred cEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC-------------------cCChhhHHHcC
Q psy8428 68 SAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF-------------------DEGSDVFQMLR 127 (328)
Q Consensus 68 ~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~-------------------~~~~~lf~~l~ 127 (328)
.+++.|+ ++ ||++|+.-.|+++++.+.+... +.+..+.+|- |.+.++.+.||
T Consensus 37 ~vvl~f~~~~----~c~~C~~~~~~l~~~~~~~~~~----~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 108 (159)
T 2a4v_A 37 VVVFFVYPRA----STPGSTRQASGFRDNYQELKEY----AAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLG 108 (159)
T ss_dssp EEEEEECSSS----SSHHHHHHHHHHHHHHHHHTTT----CEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHT
T ss_pred eEEEEEcCCC----CCCCHHHHHHHHHHHHHHHHhC----CcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhC
Confidence 4677775 89 9999999999999999888631 2344433331 23456888999
Q ss_pred CCcCc
Q psy8428 128 LNTAP 132 (328)
Q Consensus 128 v~svP 132 (328)
+...|
T Consensus 109 v~~~p 113 (159)
T 2a4v_A 109 AKKTP 113 (159)
T ss_dssp CBSSS
T ss_pred Ccccc
Confidence 99998
No 234
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=97.32 E-value=0.0018 Score=59.91 Aligned_cols=122 Identities=13% Similarity=0.156 Sum_probs=83.4
Q ss_pred CCchHHHHHHHHhhhhCCCeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCC
Q psy8428 29 SLSLGDRVLHLSEMNAKKAVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSN 107 (328)
Q Consensus 29 ~~~~~~~~~~L~~l~~~~~VI~L~~-~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~ 107 (328)
|+-..+.+.+.+.....+.+.++++ +++++++. .. +...+++|+.. ....+.|+.+|..|. +
T Consensus 126 G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~-~~-~~~~vi~fs~~---------~~~~~~f~~~A~~~~------~ 188 (298)
T 3ed3_A 126 GARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLR-KS-PKLSVVLFSKQ---------DKISPVYKSIALDWL------G 188 (298)
T ss_dssp SCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHT-SC-SSEEEEEEESS---------SSCCHHHHHHHHHTB------T
T ss_pred CCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHh-cC-CceEEEEEcCC---------CcchHHHHHHHHHhh------c
Confidence 5556677777776666778999965 67888874 32 34566667432 134579999999986 5
Q ss_pred cEEEEEEECcCChhhH--HHcC-----C-------------CcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHh
Q psy8428 108 KLFFILVDFDEGSDVF--QMLR-----L-------------NTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIAD 167 (328)
Q Consensus 108 ~v~F~~vD~~~~~~lf--~~l~-----v-------------~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~ 167 (328)
++.|+.++-++..+.. .+++ | .+.|++++|++..+ +.+.+..+..+.++|.+||.+
T Consensus 189 ~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~----~~~~y~g~~~~~~~i~~fi~~ 264 (298)
T 3ed3_A 189 KFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKD----KFWEYEGNSINKNDISKFLRD 264 (298)
T ss_dssp TEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTT----EEEECCCSSCCHHHHHHHHHH
T ss_pred CcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCC----ceEEeccccCCHHHHHHHHHh
Confidence 7999999877644443 3443 3 67999999987521 222322245789999999998
Q ss_pred hcCC
Q psy8428 168 RTDI 171 (328)
Q Consensus 168 ~t~~ 171 (328)
..+.
T Consensus 265 ~~~~ 268 (298)
T 3ed3_A 265 TFSI 268 (298)
T ss_dssp HHTC
T ss_pred hcCC
Confidence 7664
No 235
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.31 E-value=6.4e-05 Score=65.64 Aligned_cols=56 Identities=11% Similarity=0.173 Sum_probs=43.2
Q ss_pred hhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHH---HHHHHHcccccCCCCcEEEEEEECcCC
Q psy8428 53 GQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEY---TIVANSFRYSQMYSNKLFFILVDFDEG 119 (328)
Q Consensus 53 ~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef---~~vA~s~~~~~~~~~~v~F~~vD~~~~ 119 (328)
..+|..+. .....-.++|.|++. ||++|+.++|.+ +++++.+. +++.|.++|++.+
T Consensus 101 g~~y~~l~-~p~~~~~~vveFf~~----~C~~C~~~~p~~~~~~~l~~~~~------~~v~~~~~~v~~~ 159 (197)
T 1un2_A 101 GKQYTTLE-KPVAGAPQVLEFFSF----FCPHCYQFEEVLHISDNVKKKLP------EGVKMTKYHVNFM 159 (197)
T ss_dssp TTTEEECS-SCCTTCCSEEEEECT----TCHHHHHHHHTSCHHHHHTTSSC------TTCCEEEEECSSS
T ss_pred CCCceEcc-CCCCCCCEEEEEECC----CChhHHHhCcccccHHHHHHHCC------CCCEEEEeccCcC
Confidence 34565442 122234689999999 999999999999 99988874 4799999999875
No 236
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.30 E-value=0.00027 Score=53.11 Aligned_cols=51 Identities=18% Similarity=0.261 Sum_probs=39.5
Q ss_pred EEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChh----hHHHcCCCcCceEE
Q psy8428 69 AIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD----VFQMLRLNTAPIFM 135 (328)
Q Consensus 69 vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~----lf~~l~v~svP~l~ 135 (328)
-+++|+++ ||++|+.+++.+++. .+-|..+|++++++ +.+.++..++|+++
T Consensus 7 ~v~ly~~~----~C~~C~~~~~~L~~~------------~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l~ 61 (92)
T 2khp_A 7 DVIIYTRP----GCPYCARAKALLARK------------GAEFNEIDASATPELRAEMQERSGRNTFPQIF 61 (92)
T ss_dssp CEEEEECT----TCHHHHHHHHHHHHT------------TCCCEEEESTTSHHHHHHHHHHHTSSCCCEEE
T ss_pred cEEEEECC----CChhHHHHHHHHHHc------------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE
Confidence 47789999 999999998877642 25577889987654 44578999999763
No 237
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.24 E-value=0.00053 Score=60.09 Aligned_cols=103 Identities=12% Similarity=0.077 Sum_probs=65.4
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC----------------------------c
Q psy8428 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF----------------------------D 117 (328)
Q Consensus 67 y~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~----------------------------~ 117 (328)
..+++.|| ++ ||++|+.-.|.++++.+.+.+ .++.+.-+.. |
T Consensus 49 k~vvl~F~pat----~C~~C~~e~~~l~~l~~~~~~-----~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D 119 (211)
T 2pn8_A 49 KYLVFFFYPLD----FTFVCPTEIIAFGDRLEEFRS-----INTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSD 119 (211)
T ss_dssp SEEEEEECSCT----TSSHHHHHHHHHHHTHHHHHT-----TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEEC
T ss_pred CeEEEEEECCC----CCCCCHHHHHHHHHHHHHHHH-----CCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEEC
Confidence 36899999 99 999999999999999988753 1233322222 2
Q ss_pred CChhhHHHcCCC------cCceEEEecCCCCCCCCCceeee---ecccCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8428 118 EGSDVFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQ---RVGYSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (328)
Q Consensus 118 ~~~~lf~~l~v~------svP~l~~f~p~g~~~~~~~~~~~---~~~~~a~~l~~fl~~~t~~~-i~i~~p~~~~ 182 (328)
...++.+.||+. .+|+.+++.+.|+.. +... ..+.+.+++.+.|++..... -.+.-|.||.
T Consensus 120 ~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~----~~~~g~~~~~~~~~ell~~l~~l~~~~~~~~~~p~~w~ 190 (211)
T 2pn8_A 120 LTHQISKDYGVYLEDSGHTLRGLFIIDDKGILR----QITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWK 190 (211)
T ss_dssp TTSHHHHHTTCEETTTTEECEEEEEECTTSBEE----EEEEECTTBCCCHHHHHHHHHHHHHHHHHCCBBCTTCC
T ss_pred CchHHHHHcCCcccCCCcccceEEEECCCCEEE----EEEecCCCCCCCHHHHHHHHHHhhhcccCCcccCCCCC
Confidence 234677888884 699999998765421 1111 11246788888887643211 1334456663
No 238
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.22 E-value=0.0045 Score=55.39 Aligned_cols=125 Identities=10% Similarity=0.058 Sum_probs=84.8
Q ss_pred hHHHHHHHHhhhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCC-CCccchhhHHHHHHHHHHcccccCCCCcEE
Q psy8428 32 LGDRVLHLSEMNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQR-NCHICVSASDEYTIVANSFRYSQMYSNKLF 110 (328)
Q Consensus 32 ~~~~~~~L~~l~~~~~VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~-~C~~C~~~~pef~~vA~s~~~~~~~~~~v~ 110 (328)
..+.+.+..+...-.-|.++|.+|+.++. ++ + ..++.|...+... .....+.+...++++|+.+. ++.
T Consensus 102 ~~~~l~~fi~~~~~Plv~e~t~~n~~~~~-~~-~--~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k-------ki~ 170 (250)
T 3ec3_A 102 EASAIKDYVVKHALPLVGHRKTSNDAKRY-SK-R--PLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP-------EYT 170 (250)
T ss_dssp CHHHHHHHHHHHSSCTEEEECTTTHHHHS-CS-S--SEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT-------TSE
T ss_pred CHHHHHHHHHHcCCCceeecCccchhhhh-cc-C--ccEEEEEecccccccchhHHHHHHHHHHHHHhhc-------cee
Confidence 34455555544333459999999998875 32 2 3455555432111 12335668999999999874 599
Q ss_pred EEEEECcCChhhHHHcCCCc--C-ceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc
Q psy8428 111 FILVDFDEGSDVFQMLRLNT--A-PIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 111 F~~vD~~~~~~lf~~l~v~s--v-P~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~ 172 (328)
|+.+|.++.+...+.||+.. . |.+.++... ...|....+..+++.|.+|+++.+.-.
T Consensus 171 F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~~-----~~ky~~~~~~~t~~~i~~Fv~~~~~Gk 230 (250)
T 3ec3_A 171 FAIADEEDYATEVKDLGLSESGGDVNAAILDES-----GKKFAMEPEEFDSDALREFVMAFKKGK 230 (250)
T ss_dssp EEEEETTTTHHHHHHTTCSSCSCSCEEEEECTT-----SCEEECCCCSCCHHHHHHHHHHHHTTC
T ss_pred EEEEcHHHHHHHHHHcCCCccCCCcEEEEEcCC-----CceecCCcccCCHHHHHHHHHHHHCCC
Confidence 99999999888899999974 4 477777533 134655445678999999999877644
No 239
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.19 E-value=0.001 Score=56.41 Aligned_cols=88 Identities=10% Similarity=0.045 Sum_probs=56.2
Q ss_pred cEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc---------------------CChhhHHH
Q psy8428 68 SAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD---------------------EGSDVFQM 125 (328)
Q Consensus 68 ~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~---------------------~~~~lf~~ 125 (328)
++++.|+ ++ ||++|+.-.|.++++.+.+.. ..+.+.-+..| ...++.+.
T Consensus 53 ~vvl~f~~~~----~c~~C~~el~~l~~l~~~~~~-----~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ 123 (179)
T 3ixr_A 53 WLVLYFYPKD----NTPGSSTEGLEFNLLLPQFEQ-----INATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKA 123 (179)
T ss_dssp EEEEEECSCT----TSHHHHHHHHHHHHHHHHHHT-----TTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHH
T ss_pred CEEEEEEcCC----CCCchHHHHHHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHH
Confidence 5777776 88 999999999999999998863 23444444443 23456777
Q ss_pred cCCCc------------CceEEEecCCCCCCCCCceeee--ecccCHHHHHHHHHhh
Q psy8428 126 LRLNT------------APIFMHFPAKGKPKPSDTLDIQ--RVGYSAEAIVKWIADR 168 (328)
Q Consensus 126 l~v~s------------vP~l~~f~p~g~~~~~~~~~~~--~~~~~a~~l~~fl~~~ 168 (328)
|++.. .|+.+++.+.|+.. +.+. ....+.+++.+.|++.
T Consensus 124 ~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~----~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 124 FDVIKEKTMYGRQVIGIERSTFLIGPTHRIV----EAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp TTCEEEECCC--CEEEECCEEEEECTTSBEE----EEECSCCSTTHHHHHHHHHHHH
T ss_pred cCCcccccccCcccCCcceEEEEECCCCEEE----EEEcCCCCCCCHHHHHHHHHHH
Confidence 77753 57788887665321 1111 1123456777777653
No 240
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.18 E-value=0.00038 Score=50.71 Aligned_cols=50 Identities=16% Similarity=0.294 Sum_probs=38.9
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCCh----hhHHHcCCCcCceEE
Q psy8428 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS----DVFQMLRLNTAPIFM 135 (328)
Q Consensus 70 vV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~----~lf~~l~v~svP~l~ 135 (328)
+++|+++ ||++|+.+++.+++. .+-|..+|+++++ ++.+.+++.++|+++
T Consensus 3 i~~y~~~----~C~~C~~~~~~l~~~------------~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~ 56 (82)
T 1fov_A 3 VEIYTKE----TCPYCHRAKALLSSK------------GVSFQELPIDGNAAKREEMIKRSGRTTVPQIF 56 (82)
T ss_dssp EEEEECS----SCHHHHHHHHHHHHH------------TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE
T ss_pred EEEEECC----CChhHHHHHHHHHHC------------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE
Confidence 5778999 999999999887753 1446677887753 356788999999985
No 241
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.14 E-value=0.002 Score=54.08 Aligned_cols=33 Identities=12% Similarity=0.195 Sum_probs=27.2
Q ss_pred CCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHc
Q psy8428 63 GPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSF 99 (328)
Q Consensus 63 ~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~ 99 (328)
.+.....|+.|+.. +|++|+.++|+++++.+.+
T Consensus 24 ~~~a~v~i~~f~D~----~Cp~C~~~~~~~~~~~~~~ 56 (175)
T 1z6m_A 24 ESNAPVKMIEFINV----RCPYCRKWFEESEELLAQS 56 (175)
T ss_dssp CTTCSEEEEEEECT----TCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEEECC----CCcchHHHHHHHHHHHHHH
Confidence 33344577889999 9999999999999988877
No 242
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.12 E-value=0.0022 Score=54.69 Aligned_cols=101 Identities=8% Similarity=-0.000 Sum_probs=64.0
Q ss_pred cEEEEEee-CCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc-------------------------CChh
Q psy8428 68 SAIVMFTA-LAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-------------------------EGSD 121 (328)
Q Consensus 68 ~vvV~ftA-~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~-------------------------~~~~ 121 (328)
.+++.||+ + ||++|+.-.|+++++.+.+.. .++.+.-+..+ .+.+
T Consensus 32 ~vvl~F~~~~----~Cp~C~~e~~~l~~~~~~~~~-----~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~ 102 (186)
T 1n8j_A 32 WSVFFFYPAD----FTFVSPTELGDVADHYEELQK-----LGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGA 102 (186)
T ss_dssp EEEEEECSCT----TCSHHHHHHHHHHHHHHHHHH-----TTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSH
T ss_pred eEEEEEECCC----CCCccHHHHHHHHHHHHHHHH-----CCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchH
Confidence 58888885 8 999999999999999888753 12333333222 2345
Q ss_pred hHHHcCCC------cCceEEEecCCCCCCCCCceeeeec----ccCHHHHHHHHHhhcCCc--ceeeCCCCCc
Q psy8428 122 VFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQRV----GYSAEAIVKWIADRTDIQ--IRVFRPPNYS 182 (328)
Q Consensus 122 lf~~l~v~------svP~l~~f~p~g~~~~~~~~~~~~~----~~~a~~l~~fl~~~t~~~--i~i~~p~~~~ 182 (328)
+.+.||+. ..|+.+++.+.|... +.. .+ +.+.+++.+.|++..... ..+.-|.||.
T Consensus 103 ~~~~ygv~~~~~g~~~p~~~lID~~G~i~----~~~-~~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~p~~w~ 170 (186)
T 1n8j_A 103 LTRNFDNMREDEGLADRATFVVDPQGIIQ----AIE-VTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWK 170 (186)
T ss_dssp HHHHTTCEETTTTEECEEEEEECTTSBEE----EEE-EECTTBCCCHHHHHHHHHHHHHHHHSTTCBBCTTCC
T ss_pred HHHHhCCccCCCCceeeEEEEECCCCeEE----EEE-ecCCCCCCCHHHHHHHHHHHHHHhhcCCCccCCCCC
Confidence 67778887 479999997765321 111 22 235788888887654321 1234466774
No 243
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.11 E-value=0.00026 Score=58.90 Aligned_cols=29 Identities=14% Similarity=0.274 Sum_probs=19.0
Q ss_pred cEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcc
Q psy8428 68 SAIVMFT-ALAPQRNCHICVSASDEYTIVANSFR 100 (328)
Q Consensus 68 ~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~ 100 (328)
.+++.|| ++ ||++|+.-.|.++++.+.+.
T Consensus 32 ~vvl~f~~~~----~c~~C~~e~~~l~~~~~~~~ 61 (157)
T 4g2e_A 32 VVVLAFYPAA----FTQVCTKEMCTFRDSMAKFN 61 (157)
T ss_dssp CEEEEECSCT----TCCC------CCSCGGGGGG
T ss_pred eEEEEecCCC----CCCccccchhhccccccccc
Confidence 5778887 89 99999999998888887775
No 244
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.11 E-value=0.00094 Score=51.54 Aligned_cols=71 Identities=15% Similarity=0.230 Sum_probs=49.0
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC-----ChhhHH----HcCCCcCceEEEec
Q psy8428 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-----GSDVFQ----MLRLNTAPIFMHFP 138 (328)
Q Consensus 68 ~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~-----~~~lf~----~l~v~svP~l~~f~ 138 (328)
.-+++|+++ ||++|+.+++.+++..- -+-.+|++. .+++.+ ..+..++|++++
T Consensus 22 ~~v~ly~~~----~Cp~C~~ak~~L~~~~i------------~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i-- 83 (103)
T 3nzn_A 22 GKVIMYGLS----TCVWCKKTKKLLTDLGV------------DFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII-- 83 (103)
T ss_dssp SCEEEEECS----SCHHHHHHHHHHHHHTB------------CEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--
T ss_pred CeEEEEcCC----CCchHHHHHHHHHHcCC------------CcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--
Confidence 357779999 99999999998886542 234456653 234443 368999999986
Q ss_pred CCCCCCCCCceeeeecccCHHHHHHHH
Q psy8428 139 AKGKPKPSDTLDIQRVGYSAEAIVKWI 165 (328)
Q Consensus 139 p~g~~~~~~~~~~~~~~~~a~~l~~fl 165 (328)
.++ + ..++.+.+++.++|
T Consensus 84 ~~~------~---~igg~~~~~l~~~L 101 (103)
T 3nzn_A 84 NDE------K---AIVGFKEKEIRESL 101 (103)
T ss_dssp TTT------E---EEESCCHHHHHHHT
T ss_pred CCC------E---EEEcCCHHHHHHHh
Confidence 221 1 14788888888776
No 245
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.10 E-value=0.00048 Score=53.99 Aligned_cols=50 Identities=16% Similarity=0.442 Sum_probs=36.9
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcC----Chh----hHHHcCCCcCceEE
Q psy8428 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE----GSD----VFQMLRLNTAPIFM 135 (328)
Q Consensus 70 vV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~----~~~----lf~~l~v~svP~l~ 135 (328)
+++|+++ ||++|+..++.+++.. +-|-.+|++. +++ +.+..|..++|+++
T Consensus 21 v~vy~~~----~Cp~C~~~~~~L~~~~------------i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~if 78 (113)
T 3rhb_A 21 VVIYSKT----WCSYCTEVKTLFKRLG------------VQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNVF 78 (113)
T ss_dssp EEEEECT----TCHHHHHHHHHHHHTT------------CCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEEE
T ss_pred EEEEECC----CChhHHHHHHHHHHcC------------CCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEEE
Confidence 6779999 9999999999887642 3345677765 233 44556999999994
No 246
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.02 E-value=0.0018 Score=53.80 Aligned_cols=90 Identities=12% Similarity=0.159 Sum_probs=57.9
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHH---ccc-c----cCC------------C-----------CcEE--E--
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANS---FRY-S----QMY------------S-----------NKLF--F-- 111 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s---~~~-~----~~~------------~-----------~~v~--F-- 111 (328)
..+++.|+.+ +|+.|+.+.|+++++.+. |.. + ++. + +++- .
T Consensus 15 ~~~vv~f~D~----~Cp~C~~~~~~l~~l~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~~~~~ 90 (147)
T 3gv1_A 15 KLKVAVFSDP----DCPFCKRLEHEFEKMTDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGSI 90 (147)
T ss_dssp CEEEEEEECT----TCHHHHHHHHHHTTCCSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCTTCCC
T ss_pred CEEEEEEECC----CChhHHHHHHHHhhcCceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCCccHH
Confidence 3578999999 999999999998765211 000 0 000 0 0000 0
Q ss_pred EEEECcCChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 112 ILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 112 ~~vD~~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
+..+++++.++.+++||+++|++++ .+| + ...|..+.++|.++|++..+
T Consensus 91 ~~~~v~~~~~la~~~gI~gtPt~vi-~nG-~--------~i~G~~~~~~l~~~i~~~~~ 139 (147)
T 3gv1_A 91 CDNPVAETTSLGEQFGFNGTPTLVF-PNG-R--------TQSGYSPMPQLEEIIRKNQQ 139 (147)
T ss_dssp CSCSHHHHHHHHHHTTCCSSCEEEC-TTS-C--------EEESCCCTTHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHhCCCccCEEEE-ECC-E--------EeeCCCCHHHHHHHHHHHHH
Confidence 1122334778999999999999997 443 1 12466789999999987654
No 247
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=96.97 E-value=0.0032 Score=52.80 Aligned_cols=92 Identities=11% Similarity=0.130 Sum_probs=60.3
Q ss_pred ccEEEEEeeCCCCCCCc-cchhhHHHHHHHHHHcccccCCCCcEEEEEEECc----------------------------
Q psy8428 67 YSAIVMFTALAPQRNCH-ICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD---------------------------- 117 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~-~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~---------------------------- 117 (328)
..++|.|+++ ||+ .|..-.|.++++.+.+.+. .+++.+.-+.+|
T Consensus 29 k~vll~F~~t----~C~~~C~~~~~~l~~~~~~~~~~---~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~ 101 (170)
T 3me7_A 29 KPIILSPIYT----HCRAACPLITKSLLKVIPKLGTP---GKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAK 101 (170)
T ss_dssp SCEEEEEECT----TCCSHHHHHHHHHHTTHHHHCCB---TTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEES
T ss_pred CEEEEEEECC----CCCchhHHHHHHHHHHHHHhhhc---CCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCC
Confidence 3689999999 997 6999999999999888531 123444433332
Q ss_pred ---CChhhHHHcC---------CCcCceEEEecCCCCCCCCCceeeeec-ccCHHHHHHHHHhhcC
Q psy8428 118 ---EGSDVFQMLR---------LNTAPIFMHFPAKGKPKPSDTLDIQRV-GYSAEAIVKWIADRTD 170 (328)
Q Consensus 118 ---~~~~lf~~l~---------v~svP~l~~f~p~g~~~~~~~~~~~~~-~~~a~~l~~fl~~~t~ 170 (328)
+..++.+.|| +.+.|+++++.+.|+. .....+ ..+.+++.+-|++..+
T Consensus 102 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i-----~~~~~g~~~~~~~i~~~l~~~~~ 162 (170)
T 3me7_A 102 TSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQI-----KDYIYGVNYNYLEFVNALRLARG 162 (170)
T ss_dssp SHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBE-----EEEEESSSCCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeE-----EEEEeCCCCCHHHHHHHHHHhhc
Confidence 1234555555 4456788888776532 111123 3578999999988765
No 248
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=96.94 E-value=0.0084 Score=52.78 Aligned_cols=41 Identities=10% Similarity=0.119 Sum_probs=32.4
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF 116 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~ 116 (328)
+..++|.|||+ ||++|+ -.|+++++.+.|.. +.+.+.-+.+
T Consensus 56 GKvvll~FwAt----~C~~c~-e~p~L~~l~~~~~~-----~g~~Vlgvs~ 96 (215)
T 2i3y_A 56 GKHILFVNVAT----YCGLTA-QYPELNALQEELKP-----YGLVVLGFPC 96 (215)
T ss_dssp TSEEEEEEECS----SSGGGG-GHHHHHHHHHHHGG-----GTEEEEEEEC
T ss_pred CCEEEEEEeCC----CCCChH-hHHHHHHHHHHhcc-----CCeEEEEEEc
Confidence 34799999999 999999 68899999998863 2366666654
No 249
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=96.91 E-value=0.003 Score=53.79 Aligned_cols=33 Identities=9% Similarity=0.147 Sum_probs=27.9
Q ss_pred CCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcc
Q psy8428 64 PRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFR 100 (328)
Q Consensus 64 ~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~ 100 (328)
++....|+.|+.. ||++|+.+.|+++++.+.+.
T Consensus 20 ~~~~~~i~~f~d~----~Cp~C~~~~~~l~~l~~~~~ 52 (195)
T 2znm_A 20 QSGKIEVLEFFGY----FCVHCHHFDPLLLKLGKALP 52 (195)
T ss_dssp SSSSEEEEEEECT----TSCCTTSSCHHHHHHHHHSC
T ss_pred CCCCcEEEEEECC----CChhHHHHhHHHHHHHHHCC
Confidence 3445678899999 99999999999999988763
No 250
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=96.89 E-value=0.006 Score=54.52 Aligned_cols=89 Identities=12% Similarity=0.116 Sum_probs=60.5
Q ss_pred CccEEEEEee-CCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc---------------------------
Q psy8428 66 NYSAIVMFTA-LAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD--------------------------- 117 (328)
Q Consensus 66 ~y~vvV~ftA-~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~--------------------------- 117 (328)
+.++++.||+ + ||++|+.-.|.++++.+.+.. .++.+.-+..|
T Consensus 77 Gk~vvL~F~~~~----~cp~C~~el~~l~~l~~~~~~-----~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~ 147 (240)
T 3qpm_A 77 GKYLVFFFYPLD----FTFVCPTEIIAFSDRVHEFRA-----INTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLS 147 (240)
T ss_dssp TSEEEEEECSCT----TSSHHHHHHHHHHHHHHHHHT-----TTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEE
T ss_pred CCEEEEEEECCC----CCCchHHHHHHHHHHHHHHHH-----CCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEe
Confidence 3468889998 8 999999999999999998863 12333333332
Q ss_pred -CChhhHHHcCCC------cCceEEEecCCCCCCCCCceeee---ecccCHHHHHHHHHh
Q psy8428 118 -EGSDVFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQ---RVGYSAEAIVKWIAD 167 (328)
Q Consensus 118 -~~~~lf~~l~v~------svP~l~~f~p~g~~~~~~~~~~~---~~~~~a~~l~~fl~~ 167 (328)
...++.+.||+. .+|+.+++.+.|... +... ..+.+.+++.+.|++
T Consensus 148 D~~~~v~~~ygv~~~~~g~~~p~~flID~~G~I~----~~~~~~~~~~~~~~eil~~l~~ 203 (240)
T 3qpm_A 148 DLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLR----QITMNDLPVGRSVDETLRLVQA 203 (240)
T ss_dssp CTTSHHHHHTTCEETTTTEECEEEEEECTTSBEE----EEEEECTTBCCCHHHHHHHHHH
T ss_pred CchHHHHHHhCCccccCCCccceEEEEcCCCeEE----EEEecCCCCCCCHHHHHHHHHH
Confidence 234678889998 789999998765431 1111 113456777777764
No 251
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=96.89 E-value=0.00065 Score=50.18 Aligned_cols=74 Identities=12% Similarity=0.101 Sum_probs=49.1
Q ss_pred EEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC----hhhHHHcCC-----CcCceEEEecC
Q psy8428 69 AIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG----SDVFQMLRL-----NTAPIFMHFPA 139 (328)
Q Consensus 69 vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~----~~lf~~l~v-----~svP~l~~f~p 139 (328)
.+++|+++ ||+.|+..++.+++..- +..+..+|.+++ +++.+..|. .++|++++ .
T Consensus 5 ~v~ly~~~----~Cp~C~~~~~~L~~~~i----------~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~ 68 (89)
T 3msz_A 5 KVKIYTRN----GCPYCVWAKQWFEENNI----------AFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--D 68 (89)
T ss_dssp CEEEEECT----TCHHHHHHHHHHHHTTC----------CCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--T
T ss_pred EEEEEEcC----CChhHHHHHHHHHHcCC----------CceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--C
Confidence 36789999 99999999887765321 234455566554 467778888 99999965 3
Q ss_pred CCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 140 KGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 140 ~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
| +.+ + ..+++.+++++..+
T Consensus 69 g------~~i----~--g~~~i~~~~~~~~~ 87 (89)
T 3msz_A 69 D------EHI----G--GFTELKANADKILN 87 (89)
T ss_dssp T------EEE----E--SHHHHHHTHHHHTT
T ss_pred C------EEE----e--ChHHHHHHHHHHhc
Confidence 3 111 2 35667777766544
No 252
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.81 E-value=0.0019 Score=50.41 Aligned_cols=65 Identities=12% Similarity=0.140 Sum_probs=43.4
Q ss_pred hhHHHHHHcCCCCccEEEEEee-CCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChh----hHHHcCC
Q psy8428 54 QKYKEYIKNGPRNYSAIVMFTA-LAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD----VFQMLRL 128 (328)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~ftA-~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~----lf~~l~v 128 (328)
+.+++.+. .+ .+++ |+. +....||++|+..++.++.. .+-|..+|++++++ +.+..|.
T Consensus 6 ~~~~~~i~-~~---~vvv-y~~g~~~~~~Cp~C~~ak~~L~~~------------~i~~~~vdi~~~~~~~~~l~~~~g~ 68 (109)
T 1wik_A 6 SGLKVLTN-KA---SVML-FMKGNKQEAKCGFSKQILEILNST------------GVEYETFDILEDEEVRQGLKTFSNW 68 (109)
T ss_dssp CCHHHHHT-TS---SEEE-EESSTTTCCCSSTHHHHHHHHHHT------------CSCEEEEESSSCHHHHHHHHHHHSC
T ss_pred HHHHHHhc-cC---CEEE-EEecCCCCCCCchHHHHHHHHHHc------------CCCeEEEECCCCHHHHHHHHHHhCC
Confidence 45677763 32 3544 555 11123999999998887643 25688999998764 4455689
Q ss_pred CcCceEE
Q psy8428 129 NTAPIFM 135 (328)
Q Consensus 129 ~svP~l~ 135 (328)
.++|.++
T Consensus 69 ~~vP~if 75 (109)
T 1wik_A 69 PTYPQLY 75 (109)
T ss_dssp CSSCEEE
T ss_pred CCCCEEE
Confidence 9999863
No 253
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=96.70 E-value=0.0031 Score=55.77 Aligned_cols=106 Identities=16% Similarity=0.209 Sum_probs=66.1
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc-----------------------------
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD----------------------------- 117 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~----------------------------- 117 (328)
+.+++.|+++ ||++|..-.|.+.++++.+.+ .++.+.-+.+|
T Consensus 33 ~vvL~~~~a~----~cp~C~~el~~l~~l~~~f~~-----~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil 103 (224)
T 1prx_A 33 WGILFSHPRD----FTPVCTTELGRAAKLAPEFAK-----RNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPII 103 (224)
T ss_dssp EEEEEEESCS----SCHHHHHHHHHHHHHHHHHHT-----TTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEE
T ss_pred eEEEEEECCC----CCCCcHHHHHHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCccee
Confidence 5566777899 999999999999999988863 12333333222
Q ss_pred --CChhhHHHcCCC------------cCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8428 118 --EGSDVFQMLRLN------------TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (328)
Q Consensus 118 --~~~~lf~~l~v~------------svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~-i~i~~p~~~~ 182 (328)
.+.++.+.||+. ++|+.+++.+.|+......+.. ..+++.+++.+.|++..... -.+..|.||.
T Consensus 104 ~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~-~~gr~~~eil~~i~~l~~~~~~~~~~p~~W~ 182 (224)
T 1prx_A 104 DDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPA-TTGRNFDEILRVVISLQLTAEKRVATPVDWK 182 (224)
T ss_dssp ECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCT-TBCCCHHHHHHHHHHHHHHHHHCEEBCTTCC
T ss_pred ecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCC-CCCCCHHHHHHHHHHHHhhccCCcCCCCCCC
Confidence 244677888874 4899999987754310000010 12457888888887543211 2455677774
No 254
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=96.67 E-value=0.0018 Score=51.10 Aligned_cols=62 Identities=11% Similarity=0.250 Sum_probs=43.8
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC-------hhhHHHc
Q psy8428 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG-------SDVFQML 126 (328)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~-------~~lf~~l 126 (328)
+.+++.+.+. -+++|+.+ ||+.|+..++.+++.. +-|-.+|++.. ..+.+..
T Consensus 8 ~~~~~~i~~~-----~v~vy~~~----~Cp~C~~ak~~L~~~~------------i~~~~~dvd~~~~~~~~~~~l~~~~ 66 (114)
T 3h8q_A 8 RHLVGLIERS-----RVVIFSKS----YCPHSTRVKELFSSLG------------VECNVLELDQVDDGARVQEVLSEIT 66 (114)
T ss_dssp HHHHHHHHHC-----SEEEEECT----TCHHHHHHHHHHHHTT------------CCCEEEETTTSTTHHHHHHHHHHHH
T ss_pred HHHHHHhccC-----CEEEEEcC----CCCcHHHHHHHHHHcC------------CCcEEEEecCCCChHHHHHHHHHHh
Confidence 4566666422 25669999 9999999998877532 34567777742 2355778
Q ss_pred CCCcCceEEE
Q psy8428 127 RLNTAPIFMH 136 (328)
Q Consensus 127 ~v~svP~l~~ 136 (328)
|..++|++++
T Consensus 67 g~~tvP~vfi 76 (114)
T 3h8q_A 67 NQKTVPNIFV 76 (114)
T ss_dssp SCCSSCEEEE
T ss_pred CCCccCEEEE
Confidence 9999999976
No 255
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=96.62 E-value=0.00078 Score=54.66 Aligned_cols=64 Identities=16% Similarity=0.242 Sum_probs=43.2
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhh-HHHHHHHHHHcccccCCCCcEEEEEEECcCC-------hhhHHH
Q psy8428 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSA-SDEYTIVANSFRYSQMYSNKLFFILVDFDEG-------SDVFQM 125 (328)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~-~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~-------~~lf~~ 125 (328)
+.+++.+... -+++|+.+ ||+.|+.. ++.+++... ..+-+..+|++.. .++.+.
T Consensus 28 ~~v~~~i~~~-----~Vvvy~~~----~Cp~C~~a~k~~L~~~~~---------~~i~~~~vdvd~~~~~~~~~~~L~~~ 89 (129)
T 3ctg_A 28 AHVKDLIGQK-----EVFVAAKT----YCPYCKATLSTLFQELNV---------PKSKALVLELDEMSNGSEIQDALEEI 89 (129)
T ss_dssp HHHHHHHHHS-----SEEEEECT----TCHHHHHHHHHHHTTSCC---------CGGGEEEEEGGGSTTHHHHHHHHHHH
T ss_pred HHHHHHHcCC-----CEEEEECC----CCCchHHHHHHHHHhcCc---------cCCCcEEEEccccCCHHHHHHHHHHH
Confidence 4556665422 26778999 99999998 877664431 1244556666643 357888
Q ss_pred cCCCcCceEE
Q psy8428 126 LRLNTAPIFM 135 (328)
Q Consensus 126 l~v~svP~l~ 135 (328)
+|..++|+++
T Consensus 90 ~g~~tVP~vf 99 (129)
T 3ctg_A 90 SGQKTVPNVY 99 (129)
T ss_dssp HSCCSSCEEE
T ss_pred hCCCCCCEEE
Confidence 9999999974
No 256
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=96.60 E-value=0.016 Score=49.11 Aligned_cols=41 Identities=15% Similarity=0.200 Sum_probs=31.2
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC
Q psy8428 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF 116 (328)
Q Consensus 66 ~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~ 116 (328)
.-..|+.|+.. +|++|..+.|+++++.+.+. +++.|..+.+
T Consensus 25 a~v~i~~f~d~----~Cp~C~~~~~~l~~l~~~~~------~~v~~~~~p~ 65 (193)
T 2rem_A 25 GKIEVVEIFGY----TCPHCAHFDSKLQAWGARQA------KDVRFTLVPA 65 (193)
T ss_dssp TCEEEEEEECT----TCHHHHHHHHHHHHHHHTSC------TTEEEEEEEC
T ss_pred CCeEEEEEECC----CChhHhhhhHHHHHHHHhcC------CceEEEEeCc
Confidence 34478889999 99999999999999988763 3455554443
No 257
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=96.58 E-value=0.013 Score=51.14 Aligned_cols=40 Identities=8% Similarity=-0.095 Sum_probs=31.3
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF 116 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~ 116 (328)
..++|.|||+ ||++|+ -.|+++++.+.|.. +.+.+.-+.+
T Consensus 39 Kvvll~F~At----~C~~c~-e~p~L~~l~~~~~~-----~g~~vlgvs~ 78 (207)
T 2r37_A 39 KYVLFVNVAS----YGGLTG-QYIELNALQEELAP-----FGLVILGFPC 78 (207)
T ss_dssp SEEEEEEECS----SSTTTT-HHHHHHHHHHHHGG-----GTEEEEEEEC
T ss_pred CEEEEEEeCC----CCCChH-HHHHHHHHHHHhcc-----CCEEEEEEEC
Confidence 4689999999 999995 57899999998863 2366666654
No 258
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=96.51 E-value=0.012 Score=53.07 Aligned_cols=89 Identities=12% Similarity=0.091 Sum_probs=58.9
Q ss_pred CccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc---------------------------
Q psy8428 66 NYSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD--------------------------- 117 (328)
Q Consensus 66 ~y~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~--------------------------- 117 (328)
...+++.|| +. ||++|..-.|.++++++.|.+ .++.+.-+..|
T Consensus 91 GK~vvL~F~~a~----~cp~C~~el~~l~~l~~~~~~-----~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~ 161 (254)
T 3tjj_A 91 GKYLVFFFYPLD----FTFVCPTEIIAFGDRLEEFRS-----INTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLS 161 (254)
T ss_dssp TSEEEEEECSCT----TCSSCCHHHHHHHHTHHHHHT-----TTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEE
T ss_pred CCeEEEEEECCC----CCCchHHHHHHHHHHHHHHHH-----cCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceee
Confidence 346888888 88 999999999999999988863 12333333322
Q ss_pred -CChhhHHHcCCC------cCceEEEecCCCCCCCCCceeee---ecccCHHHHHHHHHh
Q psy8428 118 -EGSDVFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQ---RVGYSAEAIVKWIAD 167 (328)
Q Consensus 118 -~~~~lf~~l~v~------svP~l~~f~p~g~~~~~~~~~~~---~~~~~a~~l~~fl~~ 167 (328)
...++.+.||+. .+|+.+++.+.|... +... ..+.+.+++.+.|+.
T Consensus 162 D~~~~va~~ygv~~~~~g~~~p~tflID~~G~I~----~~~~~~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 162 DLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILR----QITLNDLPVGRSVDETLRLVQA 217 (254)
T ss_dssp CTTSHHHHHHTCEETTTTEECEEEEEECTTSBEE----EEEEECTTCCCCHHHHHHHHHH
T ss_pred CcHHHHHHHcCCccccCCCccceEEEECCCCeEE----EEEecCCCCCCCHHHHHHHHHh
Confidence 234678888885 689999998765431 1111 114456777777754
No 259
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=96.50 E-value=0.00053 Score=57.60 Aligned_cols=90 Identities=9% Similarity=0.120 Sum_probs=53.6
Q ss_pred cEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc---------------------CChhhHHH
Q psy8428 68 SAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD---------------------EGSDVFQM 125 (328)
Q Consensus 68 ~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~---------------------~~~~lf~~ 125 (328)
++++.|+ ++ ||++|+.-.|.+++..+.+.+ ..+.+.-+..| .+.++.+.
T Consensus 35 ~vvl~f~~~~----~cp~C~~e~~~l~~~~~~~~~-----~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ 105 (164)
T 4gqc_A 35 PAVLIFFPAA----FSPVCTKELCTFRDKMAQLEK-----ANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKL 105 (164)
T ss_dssp CEEEEECSCT----TCCEECSSCEESCCCGGGGGG-----SSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHH
T ss_pred EEEEEEeCCC----CCCCcccchhhhhhhHHHhhc-----cCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHH
Confidence 4666666 88 999999888888887777753 22444444333 23456677
Q ss_pred cCCC----------cCceEEEecCCCCCCCCCceeee----ecccCHHHHHHHHHhhcC
Q psy8428 126 LRLN----------TAPIFMHFPAKGKPKPSDTLDIQ----RVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 126 l~v~----------svP~l~~f~p~g~~~~~~~~~~~----~~~~~a~~l~~fl~~~t~ 170 (328)
||+. ..|+.++..+.|.. .+... .+..+.+++.+.+++..+
T Consensus 106 ygv~~~~~~~~~~~~~p~tflID~~G~I----~~~~~~~~~~~~~~~~eil~~l~~l~~ 160 (164)
T 4gqc_A 106 YNVYHEDLKGLKMVAKRAVFIVKPDGTV----AYKWVTDNPLNEPDYDEVVREANKIAG 160 (164)
T ss_dssp TTCEEEEETTEEEEECCEEEEECTTSBE----EEEEECSCTTCCCCHHHHHHHHHHHHH
T ss_pred cCCcccccccCcCCeeeEEEEECCCCEE----EEEEEeCCCCCCCCHHHHHHHHHHHhc
Confidence 7763 36777777665432 11111 112256777777766543
No 260
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.49 E-value=0.03 Score=47.92 Aligned_cols=121 Identities=8% Similarity=0.073 Sum_probs=79.4
Q ss_pred HHHHHhhhhCCCeEEeChhhHHHHHHcC-----CCCccEEEEEeeCCCCCCCccchhhHHHH---HHHHHHcccccCCCC
Q psy8428 36 VLHLSEMNAKKAVLRFDGQKYKEYIKNG-----PRNYSAIVMFTALAPQRNCHICVSASDEY---TIVANSFRYSQMYSN 107 (328)
Q Consensus 36 ~~~L~~l~~~~~VI~L~~~nf~~~v~~~-----~r~y~vvV~ftA~~~~~~C~~C~~~~pef---~~vA~s~~~~~~~~~ 107 (328)
++++.+.-... -...-..+|++-+... .....++|++.++ ||..|..|..+. +.|.+-.. .
T Consensus 21 ~~~f~~~yg~~-~p~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~----~~~~~~~f~~~~L~~~~V~~~l~------~ 89 (178)
T 2ec4_A 21 TAEFSSRYGDC-HPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHD----ESVLTNVFCSQMLCAESIVSYLS------Q 89 (178)
T ss_dssp HHHHHHHHCSC-CCCCCCSCHHHHHHTTTSSCTTTCCEEEEEEECS----SCSHHHHHHHHTTTCHHHHHHHH------H
T ss_pred HHHHHHHhCCC-CCCeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCC----CCccHHHHHHHhcCCHHHHHHHH------c
Confidence 34444333222 2344567888887543 3457788999999 999999887433 33444333 3
Q ss_pred cEEEEEEECcCCh---------------hhHH---HcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 108 KLFFILVDFDEGS---------------DVFQ---MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 108 ~v~F~~vD~~~~~---------------~lf~---~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
+..+...|+++.. ++.. .++++++|++.+..+.+. .-+......|..+++++.+.|.+..
T Consensus 90 nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~P~l~ii~~~~~--~~~vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 90 NFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGKRS--SNEVLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTCSEEEEECCCSS--CCCEEEEECSCCCHHHHHHHHHHHH
T ss_pred CEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCCCeEEEEEcCCC--ceEEEEEEeCCCCHHHHHHHHHHHH
Confidence 5888899998743 3443 389999999999976521 1133444567788998888876543
No 261
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=96.47 E-value=0.021 Score=47.83 Aligned_cols=44 Identities=14% Similarity=0.265 Sum_probs=33.3
Q ss_pred ccEEEEEeeCCCCCCCc-cchhhHHHHHHHHHHcccccCCCCcEEEEEEECc
Q psy8428 67 YSAIVMFTALAPQRNCH-ICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD 117 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~-~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~ 117 (328)
..+++.|+++ ||+ +|....+++.++.+.+... ..++.+.-+.+|
T Consensus 33 k~vll~F~~t----~Cp~~Cp~~~~~l~~l~~~~~~~---~~~v~~v~isvD 77 (170)
T 4hde_A 33 KVWVADFMFT----NCQTVCPPMTANMAKLQKMAKEE---KLDVQFVSFSVD 77 (170)
T ss_dssp SCEEEEEECT----TCSSSHHHHHHHHHHHHHHHHHT---TCCCEEEEEESC
T ss_pred CEEEEEEECC----CCCCcccHHHHHHHHHHHhhhcc---cccceeEeeecC
Confidence 3689999999 996 7999999999998887532 234666665554
No 262
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=96.41 E-value=0.0055 Score=51.48 Aligned_cols=30 Identities=7% Similarity=-0.063 Sum_probs=24.6
Q ss_pred cEEEEEe-eCCCCCCCccchh-hHHHHHHHHHHccc
Q psy8428 68 SAIVMFT-ALAPQRNCHICVS-ASDEYTIVANSFRY 101 (328)
Q Consensus 68 ~vvV~ft-A~~~~~~C~~C~~-~~pef~~vA~s~~~ 101 (328)
.+++.|+ ++ ||++|+. -.|.++++.+.+.+
T Consensus 33 ~vvl~f~~a~----wcp~C~~~e~p~l~~~~~~~~~ 64 (167)
T 2wfc_A 33 KGVLFAVPGA----FTPGSSKTHLPGYVEQAAAIHG 64 (167)
T ss_dssp EEEEEEESCT----TCHHHHHTHHHHHHHTHHHHHH
T ss_pred cEEEEEeCCC----CCCCCCHHHHHHHHHHHHHHHH
Confidence 4666665 99 9999999 89999999888753
No 263
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=96.40 E-value=0.0046 Score=53.18 Aligned_cols=43 Identities=14% Similarity=0.233 Sum_probs=36.9
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG 119 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~ 119 (328)
..+||.|++. ||++|+.+.|.++++++.+. +++.|..++++-+
T Consensus 25 ~v~vv~f~d~----~Cp~C~~~~~~l~~~~~~~~------~~v~~~~~p~~~~ 67 (193)
T 3hz8_A 25 KVEVLEFFGY----FCPHCAHLEPVLSKHAKSFK------DDMYLRTEHVVWQ 67 (193)
T ss_dssp SEEEEEEECT----TCHHHHHHHHHHHHHHTTCC------TTEEEEEEECCCS
T ss_pred CcEEEEEECC----CChhHHHHHHHHHHHHHHCC------CCeEEEEecCCCC
Confidence 4588999999 99999999999999998774 3699999998754
No 264
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=96.38 E-value=0.0048 Score=55.06 Aligned_cols=105 Identities=13% Similarity=0.111 Sum_probs=64.9
Q ss_pred cEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC-----------------------------c
Q psy8428 68 SAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF-----------------------------D 117 (328)
Q Consensus 68 ~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~-----------------------------~ 117 (328)
+++++|+ ++ ||++|..-.|.+.++.+.+.+. ++.+.-+.+ |
T Consensus 31 ~vvL~f~pa~----~cpvC~~el~~l~~l~~ef~~~-----~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D 101 (233)
T 2v2g_A 31 WGVLFSHPRD----FTPVSTTELGRVIQLEGDFKKR-----GVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIAD 101 (233)
T ss_dssp EEEEEECSCS----SCHHHHHHHHHHHHTHHHHHHT-----TEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEEC
T ss_pred eEEEEEECCC----CCCCcHHHHHHHHHHHHHHHHc-----CCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEEC
Confidence 4677776 88 9999999999999988887531 122222222 2
Q ss_pred CChhhHHHcCCC------------cCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8428 118 EGSDVFQMLRLN------------TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (328)
Q Consensus 118 ~~~~lf~~l~v~------------svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~-i~i~~p~~~~ 182 (328)
.+.++.+.||+. ++|+++++.+.|+......+.. ..+++.+++.+.|++..-.. -.+..|.||.
T Consensus 102 ~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~-~~gr~~~eilr~l~~Lq~~~~~~~~~p~~W~ 178 (233)
T 2v2g_A 102 ETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPA-TTGRNFSEILRVIDSLQLTAQKKVATPADWQ 178 (233)
T ss_dssp TTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECT-TBCCCHHHHHHHHHHHHHHHHSSEEBCTTCC
T ss_pred ChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCC-CCCCCHHHHHHHHHHHHhhccCCccCCCCcC
Confidence 345677888885 6899999987754310000110 12457888888886532211 2456677774
No 265
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=96.35 E-value=0.0053 Score=50.98 Aligned_cols=30 Identities=10% Similarity=0.109 Sum_probs=25.9
Q ss_pred cEEEEEe-eCCCCCCCccch-hhHHHHHHHHHHccc
Q psy8428 68 SAIVMFT-ALAPQRNCHICV-SASDEYTIVANSFRY 101 (328)
Q Consensus 68 ~vvV~ft-A~~~~~~C~~C~-~~~pef~~vA~s~~~ 101 (328)
.+++.|+ ++ ||++|+ .-.|+++++.+.+.+
T Consensus 37 ~vvl~f~~~~----~c~~C~~~e~~~l~~~~~~~~~ 68 (162)
T 1tp9_A 37 KVILFGVPGA----FTPTCSLKHVPGFIEKAGELKS 68 (162)
T ss_dssp EEEEEEESCT----TCHHHHHTHHHHHHHHHHHHHH
T ss_pred cEEEEEeCCC----CCCCCCHHHHHHHHHHHHHHHH
Confidence 5888888 88 999999 889999999988753
No 266
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.35 E-value=0.0068 Score=53.64 Aligned_cols=30 Identities=23% Similarity=0.285 Sum_probs=26.1
Q ss_pred cEEEEEe-eCCCCCCCccch-hhHHHHHHHHHHccc
Q psy8428 68 SAIVMFT-ALAPQRNCHICV-SASDEYTIVANSFRY 101 (328)
Q Consensus 68 ~vvV~ft-A~~~~~~C~~C~-~~~pef~~vA~s~~~ 101 (328)
.+++.|| |+ ||++|+ .-.|.++++++.+.+
T Consensus 35 ~vvl~f~~a~----~cp~C~~~e~~~l~~~~~~~~~ 66 (241)
T 1nm3_A 35 TVIVFSLPGA----FTPTCSSSHLPRYNELAPVFKK 66 (241)
T ss_dssp EEEEEEESCS----SCHHHHHTHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCC----CCCCCCHHHHHHHHHHHHHHHH
Confidence 5788888 99 999999 889999999988853
No 267
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=96.29 E-value=0.0062 Score=50.73 Aligned_cols=30 Identities=7% Similarity=0.407 Sum_probs=25.6
Q ss_pred CccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHc
Q psy8428 66 NYSAIVMFT-ALAPQRNCHICVSASDEYTIVANSF 99 (328)
Q Consensus 66 ~y~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~ 99 (328)
+..+++.|| ++ ||++|+.-.|+++++.+.+
T Consensus 47 gk~vvl~f~~~~----~C~~C~~~~~~l~~~~~~~ 77 (171)
T 2yzh_A 47 DVVQVIITVPSL----DTPVCETETKKFNEIMAGM 77 (171)
T ss_dssp SSEEEEEECSCT----TSHHHHHHHHHHHHHTTTC
T ss_pred CCeEEEEEECCC----CCCchHHHHHHHHHHHHHc
Confidence 346888888 78 9999999999999988776
No 268
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=96.29 E-value=0.0036 Score=52.81 Aligned_cols=57 Identities=12% Similarity=0.153 Sum_probs=42.5
Q ss_pred ccEEEEEeeCCCCCCCccchhh-HHHHHHHHHHcccccCCCCcEE-EEEEECcC---ChhhHHHcCCC-cCc
Q psy8428 67 YSAIVMFTALAPQRNCHICVSA-SDEYTIVANSFRYSQMYSNKLF-FILVDFDE---GSDVFQMLRLN-TAP 132 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~-~pef~~vA~s~~~~~~~~~~v~-F~~vD~~~---~~~lf~~l~v~-svP 132 (328)
..+++.|+++ ||++|+.- .|+++++.+.+.+ .++. +.-+..++ ..+..++++++ ++|
T Consensus 45 ~vvl~~~~a~----wcp~C~~eh~p~l~~~~~~~~~-----~g~~~vv~Is~d~~~~~~~~~~~~~~~~~fp 107 (171)
T 2pwj_A 45 KVVIFGLPGA----YTGVCSSKHVPPYKHNIDKFKA-----KGVDSVICVAINDPYTVNAWAEKIQAKDAIE 107 (171)
T ss_dssp EEEEEECSCT----TCTTHHHHTHHHHHHTHHHHHH-----TTCSEEEEEESSCHHHHHHHHHHTTCTTTSE
T ss_pred CEEEEEecCC----CCCCCCHHHHHHHHHHHHHHHH-----CCCCEEEEEeCCCHHHHHHHHHHhCCCCceE
Confidence 4577889999 99999997 9999999988863 2355 66666654 34567778874 677
No 269
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=96.24 E-value=0.0063 Score=50.50 Aligned_cols=29 Identities=7% Similarity=0.307 Sum_probs=25.4
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHc
Q psy8428 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSF 99 (328)
Q Consensus 67 y~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~ 99 (328)
..+++.|| ++ ||++|+.-.|.++++.+.+
T Consensus 44 k~vvl~f~~~~----~c~~C~~e~~~l~~~~~~~ 73 (165)
T 1q98_A 44 KRKVLNIFPSI----DTGVCATSVRKFNQQAAKL 73 (165)
T ss_dssp SEEEEEECSCS----CSSCCCHHHHHHHHHHHHS
T ss_pred CeEEEEEECCC----CCCccHHHHHHHHHHHHHc
Confidence 35888888 78 9999999999999998877
No 270
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=96.22 E-value=0.004 Score=54.96 Aligned_cols=106 Identities=15% Similarity=0.179 Sum_probs=64.9
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC----------------------------cC
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF----------------------------DE 118 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~----------------------------~~ 118 (328)
+.+++.|+|+ ||++|..-.|.++++.+.+.+ .++.+.-+.+ |.
T Consensus 33 ~vvL~f~~a~----~cp~C~~el~~l~~l~~~f~~-----~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~ 103 (220)
T 1xcc_A 33 WAILFSHPND----FTPVCTTELAELGKMHEDFLK-----LNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDE 103 (220)
T ss_dssp EEEEECCSCT----TCHHHHHHHHHHHHTHHHHHT-----TTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECT
T ss_pred eEEEEEECCC----CCCCCHHHHHHHHHHHHHHHH-----cCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECc
Confidence 5566667899 999999999999999888753 1233332222 22
Q ss_pred ChhhHHHcCCC------------cCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8428 119 GSDVFQMLRLN------------TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (328)
Q Consensus 119 ~~~lf~~l~v~------------svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~-i~i~~p~~~~ 182 (328)
+.++.+.||+. ++|+++++.+.|+......+.. ..+++.+++.+.|++..-.. -.+..|.||.
T Consensus 104 ~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~-~~g~~~~ell~~i~~lq~~~~~~~~~p~~w~ 179 (220)
T 1xcc_A 104 SRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPA-TTGRNAHEILRVLKSLQLTYTTPVATPVNWN 179 (220)
T ss_dssp TSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECT-TBCCCHHHHHHHHHHHHHHHHSSEEBCTTCC
T ss_pred hhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCC-CCCCCHHHHHHHHHHHHhhhcCCcccCCCcC
Confidence 45677888883 4799999987754310000110 13467888888886532111 1455677774
No 271
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=96.21 E-value=0.0054 Score=50.93 Aligned_cols=90 Identities=11% Similarity=0.058 Sum_probs=50.8
Q ss_pred cEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcccc-----cCC----------CCcE-EEEEEECcC-ChhhHHHcCCC
Q psy8428 68 SAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYS-----QMY----------SNKL-FFILVDFDE-GSDVFQMLRLN 129 (328)
Q Consensus 68 ~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~~-----~~~----------~~~v-~F~~vD~~~-~~~lf~~l~v~ 129 (328)
.+++.|+ +. ||++|+.-.|.++++.+. ..- ..+ ..++ .|-.+. |. +.++.+.||+.
T Consensus 48 ~vvl~f~~~~----~c~~C~~~~~~l~~~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~-D~~~~~~~~~~gv~ 121 (166)
T 3p7x_A 48 KKLISVVPSI----DTGVCDQQTRKFNSDASK-EEGIVLTISADLPFAQKRWCASAGLDNVITLS-DHRDLSFGENYGVV 121 (166)
T ss_dssp CEEEEECSCT----TSHHHHHHHHHHHHHSCT-TTSEEEEEESSCHHHHHHHHHHHTCSSCEEEE-CTTTCHHHHHHTCE
T ss_pred cEEEEEECCC----CCCccHHHHHHHHHHhhc-CCCEEEEEECCCHHHHHHHHHHcCCCceEEcc-CCchhHHHHHhCCc
Confidence 5778787 77 999999999998888655 110 000 0011 111111 22 34667777777
Q ss_pred c------CceEEEecCCCCCCCCCceeee----ecccCHHHHHHHHHh
Q psy8428 130 T------APIFMHFPAKGKPKPSDTLDIQ----RVGYSAEAIVKWIAD 167 (328)
Q Consensus 130 s------vP~l~~f~p~g~~~~~~~~~~~----~~~~~a~~l~~fl~~ 167 (328)
. .|+.+++.+.|+.. +... ....+.+++.+.|++
T Consensus 122 ~~~~g~~~p~~~liD~~G~i~----~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 122 MEELRLLARAVFVLDADNKVV----YKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp ETTTTEECCEEEEECTTCBEE----EEEECSBTTSCCCHHHHHHHHHT
T ss_pred cccCCceeeEEEEECCCCeEE----EEEEcCCcccCCCHHHHHHHHhc
Confidence 4 78888887654321 1111 112346777777754
No 272
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=96.16 E-value=0.0069 Score=50.10 Aligned_cols=29 Identities=7% Similarity=0.276 Sum_probs=25.0
Q ss_pred ccEEEEEee-CCCCCCCccchhhHHHHHHHHHHc
Q psy8428 67 YSAIVMFTA-LAPQRNCHICVSASDEYTIVANSF 99 (328)
Q Consensus 67 y~vvV~ftA-~~~~~~C~~C~~~~pef~~vA~s~ 99 (328)
..+++.||+ + ||++|+.-.|.++++.+.+
T Consensus 43 k~vvl~F~~~~----~c~~C~~~~~~l~~~~~~~ 72 (163)
T 1psq_A 43 KKKVLSVVPSI----DTGICSTQTRRFNEELAGL 72 (163)
T ss_dssp SEEEEEECSCT----TSHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEEECCC----CCCccHHHHHHHHHHHHHc
Confidence 368899985 8 9999999999999988776
No 273
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=96.01 E-value=0.048 Score=48.08 Aligned_cols=101 Identities=8% Similarity=0.039 Sum_probs=64.0
Q ss_pred EEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcCC
Q psy8428 49 LRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRL 128 (328)
Q Consensus 49 I~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~v 128 (328)
..++++++++++....+ .++.+.|+.. .|..+++ ++..+.. ...+.+..++ +.+.+++++|||
T Consensus 141 ~~~~~~~l~~~~~~~~~-~~~al~f~~~----~~~~~~~-------~~~d~~~----~~~i~v~~~~-~~~~~l~~~f~v 203 (244)
T 3q6o_A 141 EPAXLEEIDGFFARNNE-EYLALIFEXG----GSYLARE-------VALDLSQ----HKGVAVRRVL-NTEANVVRKFGV 203 (244)
T ss_dssp SCCCHHHHHTHHHHCCC-SEEEEEEECT----TCCHHHH-------HHHHTTT----CTTEEEEEEE-TTCHHHHHHHTC
T ss_pred ccccHHHHHHHhhcCCC-ceEEEEEEEC----CcchHHH-------HHHHhcc----CCceEEEEEe-CchHHHHHHcCC
Confidence 45677888888754433 4466778776 5554443 3333331 2357776665 446899999999
Q ss_pred CcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCC
Q psy8428 129 NTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (328)
Q Consensus 129 ~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~ 171 (328)
+++|++++|.++|+. ...+....+.+.+..+|++..|+
T Consensus 204 ~~~Pslvl~~~~g~~-----~~~~~~~~~r~~~~~~l~~~~~~ 241 (244)
T 3q6o_A 204 TDFPSCYLLFRNGSV-----SRVPVLMESRSFYTAYLQRLSGL 241 (244)
T ss_dssp CCSSEEEEEETTSCE-----EECCCSSSSHHHHHHHHHTC---
T ss_pred CCCCeEEEEeCCCCe-----EeeccccccHHHHHHHHHhCCCC
Confidence 999999999987543 12222344567888888877664
No 274
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=95.84 E-value=0.0093 Score=51.13 Aligned_cols=43 Identities=7% Similarity=0.043 Sum_probs=31.0
Q ss_pred ccEEEEEeeCCCCCCCccchh-hHHHHHHHHHHcccccCCCCcEE-EEEEECcC
Q psy8428 67 YSAIVMFTALAPQRNCHICVS-ASDEYTIVANSFRYSQMYSNKLF-FILVDFDE 118 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~-~~pef~~vA~s~~~~~~~~~~v~-F~~vD~~~ 118 (328)
..++++|+++ ||++|+. -.|.++++++.+.. ..+. +.-+..++
T Consensus 58 ~vvL~f~~a~----wcp~C~~~e~p~l~~~~~~~~~-----~gv~~vv~Is~d~ 102 (184)
T 3uma_A 58 RVVLFAVPGA----FTPTCSLNHLPGYLENRDAILA-----RGVDDIAVVAVND 102 (184)
T ss_dssp EEEEEEESCT----TCHHHHHTHHHHHHHTHHHHHT-----TTCCEEEEEESSC
T ss_pred CEEEEEEcCC----CCCCcCHHHHHHHHHHHHHHHH-----cCCCEEEEEECCC
Confidence 3466677799 9999999 58999999988863 2244 45555544
No 275
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=95.77 E-value=0.0036 Score=53.65 Aligned_cols=42 Identities=14% Similarity=0.227 Sum_probs=33.9
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHH---HHHHHHcccccCCCCcEEEEEEECcC
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEY---TIVANSFRYSQMYSNKLFFILVDFDE 118 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef---~~vA~s~~~~~~~~~~v~F~~vD~~~ 118 (328)
-.++|.|++. ||++|+.++|.+ +++++.+. +++.|...|+.-
T Consensus 15 ~~~vvef~d~----~Cp~C~~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~ 59 (189)
T 3l9v_A 15 APAVVEFFSF----YCPPCYAFSQTMGVDQAIRHVLP------QGSRMVKYHVSL 59 (189)
T ss_dssp CCSEEEEECT----TCHHHHHHHHTSCHHHHHHTTCC------TTCCEEEEECSS
T ss_pred CCEEEEEECC----CChhHHHHhHhccchHHHHHhCC------CCCEEEEEechh
Confidence 3578899998 999999999987 67776663 468888888875
No 276
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=95.49 E-value=0.018 Score=49.66 Aligned_cols=29 Identities=7% Similarity=0.350 Sum_probs=25.5
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHc
Q psy8428 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSF 99 (328)
Q Consensus 67 y~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~ 99 (328)
..+++.|| +. ||++|+.-.|.++++.+.+
T Consensus 79 k~vvl~F~~~~----~c~~C~~e~~~l~~l~~~~ 108 (200)
T 3zrd_A 79 KRKVLNIFPSI----DTGVCAASVRKFNQLAGEL 108 (200)
T ss_dssp SEEEEEECSCC----CCSCCCHHHHHHHHHHHTS
T ss_pred CcEEEEEECCC----CCchhHHHHHHHHHHHHHh
Confidence 45788888 67 9999999999999999887
No 277
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=95.21 E-value=0.024 Score=47.97 Aligned_cols=56 Identities=4% Similarity=0.052 Sum_probs=35.1
Q ss_pred cEEEEEeeCCCCCCCccch-hhHHHHHHHHHHcccccCCCCcEEEE-EEECcC---ChhhHHHcCCC-cCc
Q psy8428 68 SAIVMFTALAPQRNCHICV-SASDEYTIVANSFRYSQMYSNKLFFI-LVDFDE---GSDVFQMLRLN-TAP 132 (328)
Q Consensus 68 ~vvV~ftA~~~~~~C~~C~-~~~pef~~vA~s~~~~~~~~~~v~F~-~vD~~~---~~~lf~~l~v~-svP 132 (328)
.++++|+++ ||++|+ +-.|.|++.++.+.+ ..+.+. -+..|+ ..+..+++++. .+|
T Consensus 46 vvL~f~pa~----wcp~C~~~e~p~l~~~~~~~~~-----~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp 107 (173)
T 3mng_A 46 GVLFGVPGA----FTPGCSKTHLPGFVEQAEALKA-----KGVQVVACLSVNDAFVTGEWGRAHKAEGKVR 107 (173)
T ss_dssp EEEEECSCT----TCHHHHHTHHHHHHHTHHHHHT-----TTCCEEEEEESSCHHHHHHHHHHTTCTTTCE
T ss_pred EEEEEEeCC----CCCCCCHHHHHHHHHHHHHHHh-----CCCEEEEEEcCCCHHHHHHHHHHhCCCCceE
Confidence 345556699 999999 578999999988863 123332 244443 23455566654 344
No 278
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=94.96 E-value=0.036 Score=44.70 Aligned_cols=65 Identities=12% Similarity=0.271 Sum_probs=41.8
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC---hh----hHHHc
Q psy8428 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG---SD----VFQML 126 (328)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~---~~----lf~~l 126 (328)
++|++++. .+ -+++|+.+ ||+.|+..+..+++.. .+ .+-|..+|++.. ++ +.+..
T Consensus 5 ~~~~~ii~-~~----~Vvvysk~----~Cp~C~~ak~lL~~~~-~~--------~v~~~~idid~~~d~~~~~~~l~~~~ 66 (127)
T 3l4n_A 5 KEYSLILD-LS----PIIIFSKS----TCSYSKGMKELLENEY-QF--------IPNYYIIELDKHGHGEELQEYIKLVT 66 (127)
T ss_dssp HHHHHHHT-SC----SEEEEECT----TCHHHHHHHHHHHHHE-EE--------ESCCEEEEGGGSTTHHHHHHHHHHHH
T ss_pred HHHHHHHc-cC----CEEEEEcC----CCccHHHHHHHHHHhc-cc--------CCCcEEEEecCCCCHHHHHHHHHHHc
Confidence 46788763 32 26778899 9999999998777631 01 123455666532 22 33445
Q ss_pred CCCcCceEEE
Q psy8428 127 RLNTAPIFMH 136 (328)
Q Consensus 127 ~v~svP~l~~ 136 (328)
|-+++|.+++
T Consensus 67 G~~tVP~IfI 76 (127)
T 3l4n_A 67 GRGTVPNLLV 76 (127)
T ss_dssp SCCSSCEEEE
T ss_pred CCCCcceEEE
Confidence 8899999964
No 279
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=94.70 E-value=0.049 Score=40.15 Aligned_cols=55 Identities=16% Similarity=0.240 Sum_probs=39.2
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc-----CCh----hhHHHcCCC-----cCceEE
Q psy8428 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-----EGS----DVFQMLRLN-----TAPIFM 135 (328)
Q Consensus 70 vV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~-----~~~----~lf~~l~v~-----svP~l~ 135 (328)
+++|+.+...+||+.|+..+..+++. .+-|-.+|++ +++ ++.+..|.. ++|.++
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~------------gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~ 69 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK------------KQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVF 69 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT------------TCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEE
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc------------CCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEE
Confidence 34566665667999999888766542 3557778887 553 456678888 999987
Q ss_pred E
Q psy8428 136 H 136 (328)
Q Consensus 136 ~ 136 (328)
+
T Consensus 70 i 70 (87)
T 1aba_A 70 A 70 (87)
T ss_dssp C
T ss_pred E
Confidence 5
No 280
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=94.69 E-value=0.031 Score=45.57 Aligned_cols=57 Identities=14% Similarity=0.172 Sum_probs=37.6
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH----HcCCCcCceEEE
Q psy8428 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ----MLRLNTAPIFMH 136 (328)
Q Consensus 68 ~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~----~l~v~svP~l~~ 136 (328)
.++|+.+++....||+.|+.....+++. .+-|..+|++++++..+ ..|..++|.+++
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~------------gv~y~~vdI~~d~~~~~~L~~~~G~~tvP~VfI 96 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAVQALAAC------------GERFAYVDILQNPDIRAELPKYANWPTFPQLWV 96 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHTT------------CSCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEE
T ss_pred CEEEEEEecCCCCCCccHHHHHHHHHHc------------CCceEEEECCCCHHHHHHHHHHHCCCCcCEEEE
Confidence 3555544421122999999888876532 35578889988765444 458889999753
No 281
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.51 E-value=0.06 Score=42.03 Aligned_cols=51 Identities=18% Similarity=0.229 Sum_probs=35.6
Q ss_pred EEEEeeCCCCCCCccch------hhHHHHHHHHHHcccccCCCCcEEEEEEECcCChh----hHHHc--------CCCcC
Q psy8428 70 IVMFTALAPQRNCHICV------SASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD----VFQML--------RLNTA 131 (328)
Q Consensus 70 vV~ftA~~~~~~C~~C~------~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~----lf~~l--------~v~sv 131 (328)
+++|+.+ +|+.|+ +....++. ..+-|-.+|++++++ +.+.+ |..++
T Consensus 10 V~vy~~~----~C~~C~~~~~~~~ak~~L~~------------~gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tv 73 (111)
T 2ct6_A 10 IRVFIAS----SSGFVAIKKKQQDVVRFLEA------------NKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLP 73 (111)
T ss_dssp EEEEECS----SCSCHHHHHHHHHHHHHHHH------------TTCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCS
T ss_pred EEEEEcC----CCCCcccchhHHHHHHHHHH------------cCCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCC
Confidence 5678888 999999 45444332 246788999998754 34444 77889
Q ss_pred ceEEE
Q psy8428 132 PIFMH 136 (328)
Q Consensus 132 P~l~~ 136 (328)
|.+++
T Consensus 74 P~vfi 78 (111)
T 2ct6_A 74 PQIFN 78 (111)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 98864
No 282
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=94.42 E-value=0.22 Score=49.50 Aligned_cols=103 Identities=9% Similarity=0.021 Sum_probs=65.3
Q ss_pred eEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcC
Q psy8428 48 VLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR 127 (328)
Q Consensus 48 VI~L~~~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~ 127 (328)
+..++++++++++.+.+ +-++++.|+.. . .+..+.++..+.. ...+.+..++ +.+.+++++||
T Consensus 140 l~~it~~~l~~~l~~~~-~~~vallF~~~----~-------s~~~~~~~ldl~~----~~~v~v~~v~-~~~~~l~~kfg 202 (519)
T 3t58_A 140 LEPAKLNDIDGFFTRNK-ADYLALVFERE----D-------SYLGREVTLDLSQ----YHAVAVRRVL-NTESDLVNKFG 202 (519)
T ss_dssp CSBCCHHHHTTGGGSCC-CSEEEEEEECT----T-------CCHHHHHHHHTTT----CTTEEEEEEE-TTCHHHHHHHT
T ss_pred cCcCCHHHHHHHhccCC-CCeEEEEecCC----c-------hHHHHHHHHHhhc----cCCeeEEEec-CchHHHHHHcC
Confidence 45678888888875433 34567778765 2 2244566666542 2457776654 45689999999
Q ss_pred CCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCCc
Q psy8428 128 LNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (328)
Q Consensus 128 v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~~ 172 (328)
|+++|+++++.++|+.. ..+......+.+..++++..++.
T Consensus 203 V~~~Pslvl~~~nGk~~-----~~~v~~~~r~~~~~~l~~l~~~~ 242 (519)
T 3t58_A 203 VTDFPSCYLLLRNGSVS-----RVPVLVESRSFYTSYLRGLPGLT 242 (519)
T ss_dssp CCCSSEEEEEETTSCEE-----ECCCSSCSHHHHHHHHTTSTTCC
T ss_pred CCCCCeEEEEeCCCcee-----ecccccccHHHHHHHHHHccCCC
Confidence 99999999999876421 11112223355667777655543
No 283
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=94.37 E-value=0.032 Score=43.70 Aligned_cols=55 Identities=18% Similarity=0.196 Sum_probs=36.9
Q ss_pred EEEEeeCCCC-CCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH----HcCCCcCceEEE
Q psy8428 70 IVMFTALAPQ-RNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ----MLRLNTAPIFMH 136 (328)
Q Consensus 70 vV~ftA~~~~-~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~----~l~v~svP~l~~ 136 (328)
+|+|+.-.|+ .||+.|+..+..++.. .+-|-.+|++++++..+ ..|-.++|.+++
T Consensus 18 Vvlf~kg~~~~~~Cp~C~~ak~~L~~~------------gi~y~~~di~~d~~~~~~l~~~~g~~tvP~ifi 77 (111)
T 3zyw_A 18 CMLFMKGTPQEPRCGFSKQMVEILHKH------------NIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLYV 77 (111)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHHT------------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEE
T ss_pred EEEEEecCCCCCcchhHHHHHHHHHHc------------CCCeEEEECcCCHHHHHHHHHHHCCCCCCEEEE
Confidence 4556661122 3999999988776632 24567789987765543 348899999864
No 284
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=94.21 E-value=0.073 Score=39.82 Aligned_cols=51 Identities=10% Similarity=0.182 Sum_probs=35.9
Q ss_pred EEEEeeCCCCCCCccc------hhhHHHHHHHHHHcccccCCCCcEEEEEEECcCCh----hhHHHcC--CCcCceEEE
Q psy8428 70 IVMFTALAPQRNCHIC------VSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS----DVFQMLR--LNTAPIFMH 136 (328)
Q Consensus 70 vV~ftA~~~~~~C~~C------~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~----~lf~~l~--v~svP~l~~ 136 (328)
+++|+.+ +|+.| +.....++. .++-|-.+|++.++ ++.+..| ..++|.+++
T Consensus 4 v~ly~~~----~C~~c~~~~~~~~ak~~L~~------------~~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi 66 (93)
T 1t1v_A 4 LRVYSTS----VTGSREIKSQQSEVTRILDG------------KRIQYQLVDISQDNALRDEMRTLAGNPKATPPQIVN 66 (93)
T ss_dssp EEEEECS----SCSCHHHHHHHHHHHHHHHH------------TTCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEEE
T ss_pred EEEEEcC----CCCCchhhHHHHHHHHHHHH------------CCCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEEE
Confidence 5678888 99999 555444331 24668889998764 3455778 779999864
No 285
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=94.21 E-value=0.036 Score=43.11 Aligned_cols=56 Identities=14% Similarity=0.091 Sum_probs=37.2
Q ss_pred cEEEEEeeCCCCC-CCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHH----HcCCCcCceEEE
Q psy8428 68 SAIVMFTALAPQR-NCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ----MLRLNTAPIFMH 136 (328)
Q Consensus 68 ~vvV~ftA~~~~~-~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~----~l~v~svP~l~~ 136 (328)
.++| |+...|.. ||+.|+.....+++. .+-|-.+|++++++..+ ..|-.++|.+++
T Consensus 19 ~Vvv-y~k~t~~~p~Cp~C~~ak~~L~~~------------gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~ifi 79 (109)
T 3ipz_A 19 KVVL-FMKGTRDFPMCGFSNTVVQILKNL------------NVPFEDVNILENEMLRQGLKEYSNWPTFPQLYI 79 (109)
T ss_dssp SEEE-EESBCSSSBSSHHHHHHHHHHHHT------------TCCCEEEEGGGCHHHHHHHHHHHTCSSSCEEEE
T ss_pred CEEE-EEecCCCCCCChhHHHHHHHHHHc------------CCCcEEEECCCCHHHHHHHHHHHCCCCCCeEEE
Confidence 3544 55533332 999999988877643 24567789887655443 348899998754
No 286
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=94.09 E-value=0.097 Score=47.73 Aligned_cols=77 Identities=14% Similarity=0.197 Sum_probs=52.5
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc------------------CChhhHHHcCCC
Q psy8428 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD------------------EGSDVFQMLRLN 129 (328)
Q Consensus 68 ~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~------------------~~~~lf~~l~v~ 129 (328)
..+.+||++ +|+.|...+.-+++++..+ ++.-...+++ ..++..+++|.+
T Consensus 44 ~~VelyTs~----gCp~C~~Ak~lL~~~~~~~--------~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~ 111 (270)
T 2axo_A 44 GVVELFTSQ----GCASCPPADEALRKMIQKG--------DVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRN 111 (270)
T ss_dssp CEEEEEECT----TCTTCHHHHHHHHHHHHHT--------SSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCS
T ss_pred cEEEEEeCC----CCCChHHHHHHHHHhhccC--------CeeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCC
Confidence 578889999 9999999999999998764 2321122221 123477889999
Q ss_pred cC--ceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHh
Q psy8428 130 TA--PIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIAD 167 (328)
Q Consensus 130 sv--P~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~ 167 (328)
++ |.+++ ++ + .. .++.+.+++.+-|.+
T Consensus 112 tVyTPqI~I--ng-~------~~--v~G~d~~~l~~~l~~ 140 (270)
T 2axo_A 112 GVYTPQAIL--NG-R------DH--VKGADVRGIYDRLDA 140 (270)
T ss_dssp CCCSSEEEE--TT-T------EE--EETTCHHHHHHHHHH
T ss_pred cccCCEEEE--CC-E------Ee--ecCCCHHHHHHHHHH
Confidence 99 99886 22 1 11 256677777777754
No 287
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=93.82 E-value=0.095 Score=46.08 Aligned_cols=53 Identities=21% Similarity=0.273 Sum_probs=40.2
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCCh---hhHHHcCCCcCceEEE
Q psy8428 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS---DVFQMLRLNTAPIFMH 136 (328)
Q Consensus 68 ~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~---~lf~~l~v~svP~l~~ 136 (328)
..+++|+.+ ||+.|+..+..+++.. +-|-.+|+++++ ++.+.+|..++|.+++
T Consensus 170 ~~i~ly~~~----~Cp~C~~a~~~L~~~~------------i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~~ 225 (241)
T 1nm3_A 170 ESISIFTKP----GCPFCAKAKQLLHDKG------------LSFEEIILGHDATIVSVRAVSGRTTVPQVFI 225 (241)
T ss_dssp CCEEEEECS----SCHHHHHHHHHHHHHT------------CCCEEEETTTTCCHHHHHHHTCCSSSCEEEE
T ss_pred ceEEEEECC----CChHHHHHHHHHHHcC------------CceEEEECCCchHHHHHHHHhCCCCcCEEEE
Confidence 356778898 9999999988777532 445567887643 4778899999999864
No 288
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=93.33 E-value=0.076 Score=42.15 Aligned_cols=55 Identities=15% Similarity=0.183 Sum_probs=36.7
Q ss_pred EEEEeeCCC-CCCCccchhhHHHHHHHHHHcccccCCCCcE-EEEEEECcCChhhHHH----cCCCcCceEEE
Q psy8428 70 IVMFTALAP-QRNCHICVSASDEYTIVANSFRYSQMYSNKL-FFILVDFDEGSDVFQM----LRLNTAPIFMH 136 (328)
Q Consensus 70 vV~ftA~~~-~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v-~F~~vD~~~~~~lf~~----l~v~svP~l~~ 136 (328)
+++|+...| ..||+.|+..+..+++. .+ -|-.+|++++++..+. .|-.++|.+++
T Consensus 22 Vvvfsk~t~~~p~Cp~C~~ak~lL~~~------------gv~~~~~vdV~~d~~~~~~l~~~tg~~tvP~vfI 82 (118)
T 2wem_A 22 VVVFLKGTPEQPQCGFSNAVVQILRLH------------GVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYL 82 (118)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHHT------------TCCCCEEEESSSCHHHHHHHHHHHTCCSSCEEEE
T ss_pred EEEEEecCCCCCccHHHHHHHHHHHHc------------CCCCCEEEEcCCCHHHHHHHHHHhCCCCcCeEEE
Confidence 344555333 23999999988877642 24 3677888887655443 38899999854
No 289
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=93.21 E-value=0.24 Score=39.20 Aligned_cols=59 Identities=8% Similarity=0.064 Sum_probs=37.5
Q ss_pred EEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhH----HHcCCCcCceEEE
Q psy8428 69 AIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF----QMLRLNTAPIFMH 136 (328)
Q Consensus 69 vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf----~~l~v~svP~l~~ 136 (328)
|+|+-.++....||+.|+.....+++..-.+ -.|-.+|+++++++. +..|-.++|.+++
T Consensus 18 Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~---------~~~~~~dv~~~~~~~~~l~~~sg~~tvP~vfI 80 (121)
T 3gx8_A 18 VVLFMKGTPEFPKCGFSRATIGLLGNQGVDP---------AKFAAYNVLEDPELREGIKEFSEWPTIPQLYV 80 (121)
T ss_dssp EEEEESBCSSSBCTTHHHHHHHHHHHHTBCG---------GGEEEEECTTCHHHHHHHHHHHTCCSSCEEEE
T ss_pred EEEEEeccCCCCCCccHHHHHHHHHHcCCCc---------ceEEEEEecCCHHHHHHHHHHhCCCCCCeEEE
Confidence 5443333222349999999988877643111 126778888776543 3457899999864
No 290
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=92.68 E-value=0.039 Score=46.98 Aligned_cols=39 Identities=10% Similarity=0.174 Sum_probs=31.6
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECc
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD 117 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~ 117 (328)
-.+||.|++. ||++|+.++|.++++.+.+ ++.|.++++.
T Consensus 23 ~~~vvef~d~----~Cp~C~~~~~~~~~~~~~~--------~v~~~~~p~~ 61 (185)
T 3feu_A 23 MAPVTEVFAL----SCGHCRNMENFLPVISQEA--------GTDIGKMHIT 61 (185)
T ss_dssp CCSEEEEECT----TCHHHHHHGGGHHHHHHHH--------TSCCEEEECC
T ss_pred CCEEEEEECC----CChhHHHhhHHHHHHHHHh--------CCeEEEEecc
Confidence 4578999999 9999999999999999876 1455666654
No 291
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=91.97 E-value=0.083 Score=45.23 Aligned_cols=41 Identities=10% Similarity=0.187 Sum_probs=30.7
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHH---HHHHHHcccccCCCCcEEEEEEECc
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEY---TIVANSFRYSQMYSNKLFFILVDFD 117 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef---~~vA~s~~~~~~~~~~v~F~~vD~~ 117 (328)
-..||.|... +|++|+.++|++ +++.+.+. +++.|...++.
T Consensus 22 ~~~vvef~d~----~Cp~C~~~~~~l~~~~~l~~~~~------~~v~~~~~~~~ 65 (191)
T 3l9s_A 22 EPQVLEFFSF----YCPHCYQFEEVLHVSDNVKKKLP------EGTKMTKYHVE 65 (191)
T ss_dssp SSCEEEEECT----TCHHHHHHHHTSCHHHHHHHHSC------TTCCEEEEECS
T ss_pred CCeEEEEECC----CChhHHHhChhccchHHHHHhCC------CCcEEEEEecc
Confidence 3578899998 999999999986 68887774 24555555544
No 292
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=91.11 E-value=0.45 Score=38.01 Aligned_cols=58 Identities=14% Similarity=0.070 Sum_probs=38.7
Q ss_pred EEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCCh----hhHHHc--------CCCcCceEEE
Q psy8428 69 AIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS----DVFQML--------RLNTAPIFMH 136 (328)
Q Consensus 69 vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~----~lf~~l--------~v~svP~l~~ 136 (328)
+|+.||++ .|+.|+-.+. ..-|+.+... .++-|-.+|++.++ +..++. |-.++|.+++
T Consensus 1 ~V~vYtt~----~c~~c~~kk~--c~~aK~lL~~----kgV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi 70 (121)
T 1u6t_A 1 VIRVYIAS----SSGSTAIKKK--QQDVLGFLEA----NKIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIFN 70 (121)
T ss_dssp CEEEEECT----TCSCHHHHHH--HHHHHHHHHH----TTCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEEE
T ss_pred CEEEEecC----CCCCccchHH--HHHHHHHHHH----CCCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEEE
Confidence 46778888 9999964333 2233344322 46889999998764 344566 7788997763
No 293
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=89.99 E-value=0.46 Score=39.15 Aligned_cols=30 Identities=10% Similarity=0.225 Sum_probs=25.8
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcc
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFR 100 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~ 100 (328)
-.+||.|..- .|++|+.++|.+.++.+.+.
T Consensus 22 ~~~vvEf~dy----~Cp~C~~~~~~~~~l~~~~~ 51 (184)
T 4dvc_A 22 SPVVSEFFSF----YCPHCNTFEPIIAQLKQQLP 51 (184)
T ss_dssp SCEEEEEECT----TCHHHHHHHHHHHHHHHTSC
T ss_pred CCEEEEEECC----CCHhHHHHhHHHHHHHhhcC
Confidence 4578888877 99999999999999888774
No 294
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=89.32 E-value=0.95 Score=39.70 Aligned_cols=92 Identities=10% Similarity=0.116 Sum_probs=57.1
Q ss_pred CccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC----------------------------
Q psy8428 66 NYSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF---------------------------- 116 (328)
Q Consensus 66 ~y~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~---------------------------- 116 (328)
..++|++|| +. ||+.|..=.+.|++..+.+.+. ++.+.-+..
T Consensus 52 GK~vVL~FyP~d----~TpvCt~E~~~f~~~~~~f~~~-----g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fplls 122 (216)
T 3sbc_A 52 GKYVVLAFIPLA----FTFVSPTEIIAFSEAAKKFEEQ-----GAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLA 122 (216)
T ss_dssp TSEEEEEECSCT----TSSHHHHHHHHHHHHHHHHHHT-----TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEE
T ss_pred CCeEEEEEEcCC----CCCcCchhhhHHHHhHHhhccC-----CceEEEeecCchhhHHHHHHHHHHhCCccCcccceEe
Confidence 345788887 66 9999999999999988887641 222222222
Q ss_pred cCChhhHHHcCCC------cCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHh
Q psy8428 117 DEGSDVFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIAD 167 (328)
Q Consensus 117 ~~~~~lf~~l~v~------svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~ 167 (328)
|.+.++.+.||+- +.+.+++..|.|...-...++. ..+++.+++.+-|..
T Consensus 123 D~~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~-~~grn~dEiLr~l~A 178 (216)
T 3sbc_A 123 DTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDL-PVGRNVDEALRLVEA 178 (216)
T ss_dssp CTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECT-TBCCCHHHHHHHHHH
T ss_pred CCCCHHHHHcCCeeccCCceeeEEEEECCCCeEEEEEEcCC-CCCCCHHHHHHHHHH
Confidence 2355778888873 4677888877654310011111 235677777776654
No 295
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=89.00 E-value=0.7 Score=39.23 Aligned_cols=31 Identities=16% Similarity=0.146 Sum_probs=25.4
Q ss_pred ccEEEEEeeCCCCCCCccchh-hHHHHHHHHHHccc
Q psy8428 67 YSAIVMFTALAPQRNCHICVS-ASDEYTIVANSFRY 101 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~-~~pef~~vA~s~~~ 101 (328)
+.+++.|.+. ||+.|.. =.|.|++.++++.+
T Consensus 49 ~vVL~fyP~~----~tp~Ct~~El~~f~~~~~ef~~ 80 (176)
T 4f82_A 49 RVVIFGLPGA----FTPTCSAQHVPGYVEHAEQLRA 80 (176)
T ss_dssp EEEEEEESCT----TCHHHHHTHHHHHHHHHHHHHH
T ss_pred eEEEEEEcCC----CCCCCCHHHHHHHHHHHHHHHh
Confidence 4456677788 9999998 89999999988864
No 296
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=87.06 E-value=0.67 Score=40.92 Aligned_cols=24 Identities=0% Similarity=-0.103 Sum_probs=18.6
Q ss_pred cEEEEEeeCCCCCC-Cccch-----hhHHHHHHH
Q psy8428 68 SAIVMFTALAPQRN-CHICV-----SASDEYTIV 95 (328)
Q Consensus 68 ~vvV~ftA~~~~~~-C~~C~-----~~~pef~~v 95 (328)
.+++.||+. | |++|. .-.|.|++.
T Consensus 50 ~vVL~F~ps----~~cp~C~~~~~~~El~~~~~~ 79 (224)
T 3keb_A 50 PKLIVTLLS----VDEDEHAGLLLLRETRRFLDS 79 (224)
T ss_dssp CEEEEECSC----TTCSTTTSHHHHHHHHHHHTT
T ss_pred cEEEEEEeC----CCCCCCCCCccHHHHHHHHHH
Confidence 588889988 7 99999 666666655
No 297
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=86.23 E-value=1.1 Score=38.42 Aligned_cols=51 Identities=14% Similarity=0.227 Sum_probs=36.7
Q ss_pred HHcCCCCccEEEEEeeCCCCCCCccchhhHHHH-HHHHHHcccccCCCCcEEEEEEECcC
Q psy8428 60 IKNGPRNYSAIVMFTALAPQRNCHICVSASDEY-TIVANSFRYSQMYSNKLFFILVDFDE 118 (328)
Q Consensus 60 v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef-~~vA~s~~~~~~~~~~v~F~~vD~~~ 118 (328)
+.+++.....|+.|... .|++|+.++|.. ..+.+.|.. .+++.|...++.-
T Consensus 23 ~~G~~~a~vtvvef~D~----~CP~C~~~~~~~~~~l~~~~~~----~g~v~~~~~~~p~ 74 (202)
T 3gha_A 23 VLGKDDAPVTVVEFGDY----KCPSCKVFNSDIFPKIQKDFID----KGDVKFSFVNVMF 74 (202)
T ss_dssp EESCTTCSEEEEEEECT----TCHHHHHHHHHTHHHHHHHTTT----TTSEEEEEEECCC
T ss_pred eecCCCCCEEEEEEECC----CChhHHHHHHHhhHHHHHHhcc----CCeEEEEEEecCc
Confidence 33344445567888888 999999999986 667666642 3578888888764
No 298
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=85.58 E-value=1.1 Score=37.34 Aligned_cols=41 Identities=10% Similarity=0.280 Sum_probs=30.9
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHH-HHHHHHcccccCCCCcEEEEEEECc
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEY-TIVANSFRYSQMYSNKLFFILVDFD 117 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef-~~vA~s~~~~~~~~~~v~F~~vD~~ 117 (328)
..+++.|+.. +|+.|..+.+.. +++++.+. +++.+...++.
T Consensus 18 ~~~~ief~d~----~CP~C~~~~~~l~~~l~~~~~------~~v~~~~~~l~ 59 (195)
T 3c7m_A 18 DKTLIKVFSY----ACPFCYKYDKAVTGPVSEKVK------DIVAFTPFHLE 59 (195)
T ss_dssp TTEEEEEECT----TCHHHHHHHHHTHHHHHHHTT------TTCEEEEEECT
T ss_pred CcEEEEEEeC----cCcchhhCcHHHHHHHHHhCC------CceEEEEEecC
Confidence 3467788888 999999999999 99988764 34555555544
No 299
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=84.23 E-value=1.8 Score=34.23 Aligned_cols=67 Identities=9% Similarity=0.173 Sum_probs=40.3
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcE-EEEEEECcCChhh----HHHcCC
Q psy8428 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKL-FFILVDFDEGSDV----FQMLRL 128 (328)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v-~F~~vD~~~~~~l----f~~l~v 128 (328)
+..++++.++ .|+|+-..+...-.|+.|+.....++.. .+ -|..+|+++++++ .+.-|-
T Consensus 11 e~i~~~i~~~----~VvvF~Kgt~~~P~C~fc~~ak~lL~~~------------gv~~~~~~~v~~~~~~r~~l~~~sg~ 74 (118)
T 2wul_A 11 EQLDALVKKD----KVVVFLKGTPEQPQCGFSNAVVQILRLH------------GVRDYAAYNVLDDPELRQGIKDYSNW 74 (118)
T ss_dssp HHHHHHHHHS----SEEEEESBCSSSBSSHHHHHHHHHHHHT------------TCCSCEEEETTSCHHHHHHHHHHHTC
T ss_pred HHHHHHHhcC----CEEEEEcCCCCCCCCHHHHHHHHHHHHh------------CCcCeEeecccCCHHHHHHHHHhccC
Confidence 3445566432 3555433322223799999887765422 13 3677888887654 445577
Q ss_pred CcCceEEE
Q psy8428 129 NTAPIFMH 136 (328)
Q Consensus 129 ~svP~l~~ 136 (328)
+++|.+++
T Consensus 75 ~TvPqIFI 82 (118)
T 2wul_A 75 PTIPQVYL 82 (118)
T ss_dssp CSSCEEEE
T ss_pred CCCCeEeE
Confidence 89999965
No 300
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=81.32 E-value=2.2 Score=37.35 Aligned_cols=44 Identities=14% Similarity=0.348 Sum_probs=32.6
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHH-HHHHHHcccccCCCCcEEEEEEECcC
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEY-TIVANSFRYSQMYSNKLFFILVDFDE 118 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef-~~vA~s~~~~~~~~~~v~F~~vD~~~ 118 (328)
...|+.|+.. .|+.|+.++|+. .++.+.|-. .+++.|...++.-
T Consensus 40 ~vtIvef~Dy----~CP~C~~~~~~~~~~l~~~~~~----~g~V~~v~~~~p~ 84 (226)
T 3f4s_A 40 PILMIEYASL----TCYHCSLFHRNVFPKIKEKYID----TGKMLYIFRHFPL 84 (226)
T ss_dssp SEEEEEEECT----TCHHHHHHHHHTHHHHHHHHTT----TTSEEEEEEECCC
T ss_pred CEEEEEEECC----CCHHHHHHHHHHHHHHHHHccc----CCeEEEEEEeCCC
Confidence 3467888888 999999999974 778777742 2568777777653
No 301
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=80.58 E-value=2.3 Score=35.31 Aligned_cols=43 Identities=12% Similarity=0.373 Sum_probs=31.2
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHH-HHHHHHcccccCCCCcEEEEEEECc
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEY-TIVANSFRYSQMYSNKLFFILVDFD 117 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef-~~vA~s~~~~~~~~~~v~F~~vD~~ 117 (328)
...|+.|+.. .|+.|..+.|.. +.+.+.|.. ++++.+...++.
T Consensus 12 ~~~i~~f~D~----~Cp~C~~~~~~l~~~l~~~~~~----~~~v~~~~~~~p 55 (186)
T 3bci_A 12 KPLVVVYGDY----KCPYCKELDEKVMPKLRKNYID----NHKVEYQFVNLA 55 (186)
T ss_dssp CCEEEEEECT----TCHHHHHHHHHHHHHHHHHTTT----TTSSEEEEEECC
T ss_pred CeEEEEEECC----CChhHHHHHHHHHHHHHHHhcc----CCeEEEEEEecC
Confidence 4467888888 999999999998 578777742 245666655543
No 302
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=78.75 E-value=1.4 Score=38.65 Aligned_cols=31 Identities=10% Similarity=0.154 Sum_probs=24.8
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHccc
Q psy8428 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRY 101 (328)
Q Consensus 67 y~vvV~ft-A~~~~~~C~~C~~~~pef~~vA~s~~~ 101 (328)
.++|++|| +. ||+.|..=...|++....+.+
T Consensus 57 K~vVL~FyP~d----~TpvCt~E~~~f~~~~~eF~~ 88 (219)
T 3tue_A 57 KWVVLFFYPLD----FTFVCPTEVIAFSDSVSRFNE 88 (219)
T ss_dssp SEEEEEECSCT----TCSSCCHHHHHHHTTHHHHHT
T ss_pred CEEEEEEeccc----CCCCCchhHhhHHHHHhhhcc
Confidence 35788887 55 999999888888888888764
No 303
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=77.47 E-value=4.3 Score=34.80 Aligned_cols=47 Identities=17% Similarity=0.164 Sum_probs=32.9
Q ss_pred CCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHH-HcccccCCCCcEEEEEEECc
Q psy8428 63 GPRNYSAIVMFTALAPQRNCHICVSASDEYTIVAN-SFRYSQMYSNKLFFILVDFD 117 (328)
Q Consensus 63 ~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~-s~~~~~~~~~~v~F~~vD~~ 117 (328)
++....+||.|+.. .|+.|+.+.++....-+ .|-. +++|.+.--++-
T Consensus 12 ~~~a~vtivef~D~----~Cp~C~~~~~~~~~~l~~~~i~----~g~v~~v~r~~p 59 (205)
T 3gmf_A 12 NPAAKLRLVEFVSY----TCPHCSHFEIESEGQLKIGMVQ----PGKGAIEVRNFV 59 (205)
T ss_dssp CTTCSEEEEEEECT----TCHHHHHHHHHHHHHHHHHTTT----TTSEEEEEEECC
T ss_pred CCCCCeEEEEEECC----CCHHHHHHHHHHHHHHHHHhcc----CCeEEEEEEeCC
Confidence 33334567888888 99999999998755444 6632 367888776764
No 304
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=75.99 E-value=4.8 Score=37.08 Aligned_cols=87 Identities=10% Similarity=0.067 Sum_probs=49.0
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC---------------------cCChhhHHHc
Q psy8428 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF---------------------DEGSDVFQML 126 (328)
Q Consensus 68 ~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~---------------------~~~~~lf~~l 126 (328)
.+++.|| |.-+|+.|..=.++|.+. .. +++.+.-+.. |.+.++.+.|
T Consensus 26 ~vvl~F~---p~~~tp~C~~e~~~~~~~---~~------~~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~~~y 93 (322)
T 4eo3_A 26 YTILFFF---PKAGTSGSTREAVEFSRE---NF------EKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEFF 93 (322)
T ss_dssp EEEEEEC---SSTTSHHHHHHHHHHHHS---CC------TTEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHHHHT
T ss_pred eEEEEEE---CCCCCCCCHHHHHHHHHH---hh------CCCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHHHhc
Confidence 5888898 344899998766666531 11 1122222221 3356788888
Q ss_pred CC----CcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhh
Q psy8428 127 RL----NTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (328)
Q Consensus 127 ~v----~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~ 168 (328)
|+ ..+|+.++..+.|... ..+.--..+..++++.+++++.
T Consensus 94 gv~~~~~~~r~tfiId~~G~i~--~~~~~v~~~~h~~~~l~~~~~~ 137 (322)
T 4eo3_A 94 NVLENGKTVRSTFLIDRWGFVR--KEWRRVKVEGHVQEVKEALDRL 137 (322)
T ss_dssp TCEETTEECCEEEEECTTSBEE--EEEESCCSTTHHHHHHHHHHHH
T ss_pred CCCCCCcCccEEEEECCCCEEE--EEEeCCCccccHHHHHHHHhhh
Confidence 88 4678888887765431 1111001123467777777654
No 305
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=75.62 E-value=2.6 Score=35.45 Aligned_cols=40 Identities=10% Similarity=0.024 Sum_probs=30.5
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEEC
Q psy8428 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF 116 (328)
Q Consensus 68 ~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~ 116 (328)
.+|+.|... .|++|+.+.|+...+-+++. .+++.|.--++
T Consensus 16 vtiv~f~D~----~Cp~C~~~~~~~~~~l~~~~-----~g~v~~v~r~~ 55 (182)
T 3gn3_A 16 RLFEVFLEP----TCPFSVKAFFKLDDLLAQAG-----EDNVTVRIRLQ 55 (182)
T ss_dssp EEEEEEECT----TCHHHHHHHTTHHHHHHHHC-----TTTEEEEEEEC
T ss_pred EEEEEEECC----CCHhHHHHHHHHHHHHHHhC-----CCCEEEEEEEc
Confidence 467788787 99999999999988776652 25677776665
No 306
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=74.34 E-value=1.9 Score=36.56 Aligned_cols=47 Identities=13% Similarity=0.029 Sum_probs=33.4
Q ss_pred cCChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 117 DEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 117 ~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
+++.+..+++|++++|+++++.+| +......|..+.+++.+.|++.+
T Consensus 163 ~~~~~~a~~~gv~g~Pt~~i~~~G------~~~~~~~G~~~~~~l~~~l~~~~ 209 (216)
T 2in3_A 163 LAGFQRVAQWGISGFPALVVESGT------DRYLITTGYRPIEALRQLLDTWL 209 (216)
T ss_dssp HHHHHHHHHTTCCSSSEEEEEETT------EEEEEESSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcccceEEEEECC------EEEEeccCCCCHHHHHHHHHHHH
Confidence 345677899999999999988765 11112235567888888887654
No 307
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=72.04 E-value=2.6 Score=41.96 Aligned_cols=62 Identities=16% Similarity=0.358 Sum_probs=40.3
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC---h----hhHHHc
Q psy8428 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG---S----DVFQML 126 (328)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~---~----~lf~~l 126 (328)
+..++.+... -++.|+.+ ||+.|++.+.-+++.. +-|-.+|+++. + ++-+..
T Consensus 9 ~~v~~~i~~~-----~v~vy~~~----~Cp~C~~~k~~L~~~~------------i~~~~~dv~~~~~~~~~~~~l~~~~ 67 (598)
T 2x8g_A 9 QWLRKTVDSA-----AVILFSKT----TCPYCKKVKDVLAEAK------------IKHATIELDQLSNGSAIQKCLASFS 67 (598)
T ss_dssp HHHHHHHHHC-----SEEEEECT----TCHHHHHHHHHHHHTT------------CCCEEEEGGGSTTHHHHHHHTHHHH
T ss_pred HHHHHHhccC-----CEEEEECC----CChhHHHHHHHHHHCC------------CCcEEEEcccCcchHHHHHHHHHHh
Confidence 4456665422 26778888 9999999888776432 33446677642 3 333457
Q ss_pred CCCcCceEEE
Q psy8428 127 RLNTAPIFMH 136 (328)
Q Consensus 127 ~v~svP~l~~ 136 (328)
+.+++|.++.
T Consensus 68 g~~tvP~v~i 77 (598)
T 2x8g_A 68 KIETVPQMFV 77 (598)
T ss_dssp SCCCSCEEEE
T ss_pred CCceeCEEEE
Confidence 8899999853
No 308
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=71.44 E-value=1.8 Score=40.89 Aligned_cols=56 Identities=14% Similarity=0.250 Sum_probs=31.6
Q ss_pred EEEEeeCCCCCCCccchhhHH-HHHHHHHHcccccCCCCcEEEEEEEC-cCC----hhhHHHcCCCcCceEEE
Q psy8428 70 IVMFTALAPQRNCHICVSASD-EYTIVANSFRYSQMYSNKLFFILVDF-DEG----SDVFQMLRLNTAPIFMH 136 (328)
Q Consensus 70 vV~ftA~~~~~~C~~C~~~~p-ef~~vA~s~~~~~~~~~~v~F~~vD~-~~~----~~lf~~l~v~svP~l~~ 136 (328)
|++|+.+ ||+.|+.... -+++..-.| ..+....+|- +++ .++.+..|.+++|.+++
T Consensus 263 VvVYsk~----~CPyC~~Ak~~LL~~~gV~y-------~eidVlEld~~~~~~e~~~~L~~~tG~~TVPqVFI 324 (362)
T 2jad_A 263 IFVASKT----YCPYSHAALNTLFEKLKVPR-------SKVLVLQLNDMKEGADIQAALYEINGQRTVPNIYI 324 (362)
T ss_dssp EEEEECT----TCHHHHHHHHHHHTTTCCCT-------TTEEEEEGGGSTTHHHHHHHHHHHHCCCSSCEEEE
T ss_pred EEEEEcC----CCcchHHHHHHHHHHcCCCc-------ceEEEEEeccccCCHHHHHHHHHHHCCCCcCEEEE
Confidence 5668888 9999997654 233221111 1233323221 223 34456679999999864
No 309
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=71.06 E-value=2.1 Score=38.83 Aligned_cols=27 Identities=7% Similarity=0.107 Sum_probs=22.6
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHH
Q psy8428 67 YSAIVMFTALAPQRNCHICVSASDEYTIVAN 97 (328)
Q Consensus 67 y~vvV~ftA~~~~~~C~~C~~~~pef~~vA~ 97 (328)
-.+++.||-+ .|+.|+.+.++.+...+
T Consensus 148 k~~I~vFtDp----~CPYCkkl~~~l~~~l~ 174 (273)
T 3tdg_A 148 DKILYIVSDP----MCPHCQKELTKLRDHLK 174 (273)
T ss_dssp TCEEEEEECT----TCHHHHHHHHTHHHHHH
T ss_pred CeEEEEEECc----CChhHHHHHHHHHHHhh
Confidence 3578899999 99999999999985443
No 310
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=65.20 E-value=12 Score=29.08 Aligned_cols=43 Identities=9% Similarity=0.182 Sum_probs=28.7
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCCh-------hhHHHcCC
Q psy8428 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS-------DVFQMLRL 128 (328)
Q Consensus 70 vV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~-------~lf~~l~v 128 (328)
+.+|+.+ +|+.|+....-+++- .+-|-.+|+.+++ ++.+++|+
T Consensus 7 i~iY~~~----~C~~C~ka~~~L~~~------------gi~y~~~di~~~~~~~~~l~~~~~~~g~ 56 (120)
T 2kok_A 7 VTIYGIK----NCDTMKKARIWLEDH------------GIDYTFHDYKKEGLDAETLDRFLKTVPW 56 (120)
T ss_dssp EEEEECS----SCHHHHHHHHHHHHH------------TCCEEEEEHHHHCCCHHHHHHHHHHSCG
T ss_pred EEEEECC----CChHHHHHHHHHHHc------------CCcEEEEeeeCCCCCHHHHHHHHHHcCh
Confidence 5678888 999999877766542 2456667776432 44566673
No 311
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=65.13 E-value=14 Score=31.08 Aligned_cols=31 Identities=13% Similarity=0.193 Sum_probs=22.6
Q ss_pred cEEEEEeeCCCCCCCccch-hhHHHHHHHHHHc-cc
Q psy8428 68 SAIVMFTALAPQRNCHICV-SASDEYTIVANSF-RY 101 (328)
Q Consensus 68 ~vvV~ftA~~~~~~C~~C~-~~~pef~~vA~s~-~~ 101 (328)
.++++|+ |.-||+.|. .-.+.|++.+..+ .+
T Consensus 45 ~vVL~fy---P~~fTp~Ct~~e~~~f~~~~~~f~~~ 77 (182)
T 1xiy_A 45 KILLISL---PGAFTPTCSTKMIPGYEEEYDYFIKE 77 (182)
T ss_dssp EEEEEEC---SCTTCHHHHHTHHHHHHHTHHHHHTT
T ss_pred cEEEEEe---CCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 4666564 345999999 7788888888777 53
No 312
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=56.03 E-value=7.3 Score=32.91 Aligned_cols=45 Identities=20% Similarity=0.179 Sum_probs=29.8
Q ss_pred ChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 119 ~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
+.+..+++||+++|++++...+ ..+....+..+.+++.+.+++.+
T Consensus 158 ~~~~a~~~gv~g~Pt~~v~~~~------~~~~~~~g~~~~e~~~~~i~~~~ 202 (208)
T 3kzq_A 158 QLSLAKSLGVNSYPSLVLQIND------AYFPIEVDYLSTEPTLKLIRERI 202 (208)
T ss_dssp HHHHHHHTTCCSSSEEEEEETT------EEEEECCCSSCSHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcccEEEEEECC------EEEEeeCCCCCHHHHHHHHHHHH
Confidence 4566789999999999987644 11222234456677777776653
No 313
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=53.60 E-value=8.5 Score=31.69 Aligned_cols=40 Identities=15% Similarity=0.218 Sum_probs=28.5
Q ss_pred ChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhc
Q psy8428 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 119 ~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t 169 (328)
+.+..+++||+++|++++ +| + .+ .|..+.+++.+.|.+..
T Consensus 138 ~~~~a~~~gv~GtPt~vv--nG-~-----~~---~G~~~~~~l~~~i~~~~ 177 (186)
T 3bci_A 138 DKKIAKDNHIKTTPTAFI--NG-E-----KV---EDPYDYESYEKLLKDKI 177 (186)
T ss_dssp HHHHHHHTTCCSSSEEEE--TT-E-----EC---SCTTCHHHHHHHHHC--
T ss_pred HHHHHHHcCCCCCCeEEE--CC-E-----Ec---CCCCCHHHHHHHHHHHH
Confidence 556789999999999987 33 1 11 25577889999887654
No 314
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=48.87 E-value=13 Score=32.22 Aligned_cols=51 Identities=12% Similarity=-0.009 Sum_probs=31.7
Q ss_pred ChhhHHH-cCCCcCceEEEecCCCCCCCCCcee-eeecccCHHHHHHHHHhhcC
Q psy8428 119 GSDVFQM-LRLNTAPIFMHFPAKGKPKPSDTLD-IQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 119 ~~~lf~~-l~v~svP~l~~f~p~g~~~~~~~~~-~~~~~~~a~~l~~fl~~~t~ 170 (328)
+.+..++ +||+++|++++++++|+...+ ..+ ...|..+.+++.+.|.+.++
T Consensus 159 ~~~~a~~~~GV~GtPtfvv~~~nG~~~~G-a~~~~~~G~~~~e~l~~~I~~~l~ 211 (226)
T 3f4s_A 159 DKSLAINKLGITAVPIFFIKLNDDKSYIE-HNKVKHGGYKELKYFTNVIDKLYG 211 (226)
T ss_dssp HHHHHHHHHCCCSSCEEEEEECCTTCCCC-GGGGEEESCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCEEEEEcCCCEEeeC-CCCcccccccCHHHHHHHHHHHHh
Confidence 3456778 999999999998765442211 111 11234458888888876544
No 315
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=44.41 E-value=1e+02 Score=23.54 Aligned_cols=76 Identities=4% Similarity=0.089 Sum_probs=52.3
Q ss_pred CCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHH
Q psy8428 81 NCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEA 160 (328)
Q Consensus 81 ~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~ 160 (328)
.-+..++.-....++-+.+.. +++.-.=.+|+.++|++++.++|-..||++=--|. + .....|..-.++
T Consensus 21 ~tp~S~~ai~nL~~i~e~~l~----~~~y~LeVIDv~eqPeLAE~~~IvATPTLIK~~P~--P-----~rriiGd~i~~q 89 (105)
T 1t4y_A 21 TRPLSQHIVQRVKNILAAVEA----TVPISLQVINVADQPQLVEYYRLVVTPALVKIGPG--S-----RQVLSGIDLTDQ 89 (105)
T ss_dssp SCHHHHHHHHHHHHHHHHHCC----SSCEEEEEEETTTCHHHHHHTTCCSSSEEEEEESS--S-----CEEEESSCHHHH
T ss_pred CCccHHHHHHHHHHHHHHhcc----CCceEEEEeecccCHHHHhHcCeeeccHhhccCCC--C-----ceEEeChHHHHH
Confidence 445566555555555555431 25788889999999999999999999999976553 1 122234444788
Q ss_pred HHHHHHh
Q psy8428 161 IVKWIAD 167 (328)
Q Consensus 161 l~~fl~~ 167 (328)
+..|.-+
T Consensus 90 l~~wwpr 96 (105)
T 1t4y_A 90 LANQLPQ 96 (105)
T ss_dssp HHHHHHH
T ss_pred HHHHhHH
Confidence 8888743
No 316
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=43.49 E-value=37 Score=28.12 Aligned_cols=54 Identities=7% Similarity=0.001 Sum_probs=34.5
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcE-EEEEEECcC---ChhhHHHcCCC
Q psy8428 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKL-FFILVDFDE---GSDVFQMLRLN 129 (328)
Q Consensus 68 ~vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v-~F~~vD~~~---~~~lf~~l~v~ 129 (328)
.+|++|+ |.-||+.|..-.+.|++.+.++.+. .+ .+.-+-.|. ..+-.++.++.
T Consensus 44 ~vVL~fy---P~~fTp~Ct~e~~~f~~~~~ef~~~-----gv~~VigIS~D~~~~~~~w~~~~~~~ 101 (171)
T 2xhf_A 44 KGILFSV---VGAFVPGSNNHIPEYLSLYDKFKEE-----GYHTIACIAVNDPFVMAAWGKTVDPE 101 (171)
T ss_dssp EEEEEEC---SCTTCTTTTSSHHHHHHTHHHHHHT-----TCCEEEEEESSCHHHHHHHHHHHCTT
T ss_pred eEEEEEE---CCCCCCcCHHHHHHHHHHHHHHHHC-----CCCEEEEEeCCCHHHHHHHHHhcCCC
Confidence 4666664 2459999999999999988888642 23 233343433 34566667763
No 317
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=43.33 E-value=14 Score=29.17 Aligned_cols=34 Identities=15% Similarity=0.282 Sum_probs=24.7
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC
Q psy8428 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG 119 (328)
Q Consensus 70 vV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~ 119 (328)
+.+|+.+ +|+.|+.....+++. .+-|-.+|++++
T Consensus 3 i~lY~~~----~C~~C~ka~~~L~~~------------gi~y~~~di~~~ 36 (132)
T 1z3e_A 3 VTLYTSP----SCTSCRKARAWLEEH------------EIPFVERNIFSE 36 (132)
T ss_dssp EEEEECT----TCHHHHHHHHHHHHT------------TCCEEEEETTTS
T ss_pred EEEEeCC----CChHHHHHHHHHHHc------------CCceEEEEccCC
Confidence 5678888 999999877766531 355667888764
No 318
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=43.32 E-value=16 Score=30.84 Aligned_cols=42 Identities=17% Similarity=0.142 Sum_probs=30.6
Q ss_pred ChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcCC
Q psy8428 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (328)
Q Consensus 119 ~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~~ 171 (328)
+.+..+++||+++|++++ .| + + ..|..+.+++.+.|.+.+.-
T Consensus 152 ~~~~a~~~gV~gtPtfvv--nG-~------~--~~G~~~~e~l~~~i~~~~~~ 193 (202)
T 3gha_A 152 DSDLNQKMNIQATPTIYV--ND-K------V--IKNFADYDEIKETIEKELKG 193 (202)
T ss_dssp HHHHHHHTTCCSSCEEEE--TT-E------E--CSCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcCCEEEE--CC-E------E--ecCCCCHHHHHHHHHHHHHh
Confidence 456789999999999997 33 1 2 13567888888888776543
No 319
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=37.86 E-value=14 Score=31.34 Aligned_cols=19 Identities=11% Similarity=0.188 Sum_probs=15.6
Q ss_pred CChhhHHHcCCCcCceEEE
Q psy8428 118 EGSDVFQMLRLNTAPIFMH 136 (328)
Q Consensus 118 ~~~~lf~~l~v~svP~l~~ 136 (328)
++.+..+++||+++|++++
T Consensus 38 ~~~~~a~~~gi~gvP~fvi 56 (197)
T 1un2_A 38 QQEKAAADVQLRGVPAMFV 56 (197)
T ss_dssp HHHHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHcCCCcCCEEEE
Confidence 3456788999999999976
No 320
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=37.37 E-value=18 Score=27.60 Aligned_cols=34 Identities=15% Similarity=0.222 Sum_probs=24.0
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC
Q psy8428 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG 119 (328)
Q Consensus 70 vV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~ 119 (328)
+.+|+.+ +|+.|+....-+++ ..+-|-.+|++++
T Consensus 2 i~iY~~~----~C~~C~kak~~L~~------------~gi~~~~~di~~~ 35 (114)
T 1rw1_A 2 YVLYGIK----ACDTMKKARTWLDE------------HKVAYDFHDYKAV 35 (114)
T ss_dssp EEEEECS----SCHHHHHHHHHHHH------------TTCCEEEEEHHHH
T ss_pred EEEEECC----CChHHHHHHHHHHH------------CCCceEEEeecCC
Confidence 4567888 99999987665543 2366777888753
No 321
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=36.64 E-value=22 Score=27.56 Aligned_cols=81 Identities=15% Similarity=0.252 Sum_probs=43.8
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCCh----hhHHHcCCCcCceEEEecCCCCCCC
Q psy8428 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS----DVFQMLRLNTAPIFMHFPAKGKPKP 145 (328)
Q Consensus 70 vV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~~----~lf~~l~v~svP~l~~f~p~g~~~~ 145 (328)
+.+|+.+ +|+.|+.....+++ ..+-|-.+|+.+++ ++-+-++-.+.|.--++...+..
T Consensus 2 i~iY~~~----~C~~c~ka~~~L~~------------~gi~~~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~-- 63 (120)
T 3l78_A 2 VTLFLSP----SCTSCRKARAWLNR------------HDVVFQEHNIMTSPLSRDELLKILSYTENGTEDIISTRSKV-- 63 (120)
T ss_dssp EEEEECS----SCHHHHHHHHHHHH------------TTCCEEEEETTTSCCCHHHHHHHHHHCSSTHHHHBCTTCHH--
T ss_pred EEEEeCC----CCHHHHHHHHHHHH------------cCCCeEEEecccCCCcHHHHHHHHhhcCCCHHHhhcCCcHH--
Confidence 4667888 99999987665542 23667788887642 33333443344433344443210
Q ss_pred CCceeeeecccCHHHHHHHHHhh
Q psy8428 146 SDTLDIQRVGYSAEAIVKWIADR 168 (328)
Q Consensus 146 ~~~~~~~~~~~~a~~l~~fl~~~ 168 (328)
..+.+......+.+++.+.+.++
T Consensus 64 ~k~l~~~~~~ls~~~~~~~m~~~ 86 (120)
T 3l78_A 64 FQKLDIDVDELSVSELINLISKN 86 (120)
T ss_dssp HHHTTCCGGGCCHHHHHHHHHHC
T ss_pred HHHcCCCcccCCHHHHHHHHHhC
Confidence 00011111235677777777665
No 322
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=35.82 E-value=22 Score=30.28 Aligned_cols=41 Identities=17% Similarity=0.115 Sum_probs=29.4
Q ss_pred ChhhH-HHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 119 GSDVF-QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 119 ~~~lf-~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
+.+.. +++||+++|++++ .| + .+ .|..+.++|.+.|.+..+
T Consensus 156 ~~~~a~~~~GV~GtPtfvv--ng-~-----~~---~G~~~~e~l~~~i~~~~~ 197 (205)
T 3gmf_A 156 ETDEAINQYNVSGTPSFMI--DG-I-----LL---AGTHDWASLRPQILARLN 197 (205)
T ss_dssp HHHHHHHHHCCCSSSEEEE--TT-E-----EC---TTCCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCccCCEEEE--CC-E-----EE---eCCCCHHHHHHHHHHHhh
Confidence 34556 8999999999987 33 1 11 356788999998877654
No 323
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=34.10 E-value=14 Score=30.78 Aligned_cols=38 Identities=16% Similarity=0.060 Sum_probs=25.5
Q ss_pred hhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHH
Q psy8428 120 SDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWI 165 (328)
Q Consensus 120 ~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl 165 (328)
.+..+++||+++|++++ +| +. +.-..++.+.+++.++|
T Consensus 144 ~~~a~~~GV~gtPtf~i--ng-~~-----~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 144 TKYARQNGIHVSPTFMI--NG-LV-----QPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp HHHHHHHTCCSSSEEEE--TT-EE-----CTTCCTTSCHHHHHHHH
T ss_pred HHHHHHCCCCccCEEEE--CC-EE-----ccCCCCCCCHHHHHHHh
Confidence 35678999999999986 22 21 11113567788888776
No 324
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=33.89 E-value=31 Score=27.63 Aligned_cols=18 Identities=22% Similarity=0.148 Sum_probs=15.5
Q ss_pred ChhhHHHcCCCcCceEEE
Q psy8428 119 GSDVFQMLRLNTAPIFMH 136 (328)
Q Consensus 119 ~~~lf~~l~v~svP~l~~ 136 (328)
+.+..+++||++.|++++
T Consensus 139 ~~~~a~~~gv~gTPtfiI 156 (184)
T 4dvc_A 139 FDKQFQDSGLTGVPAVVV 156 (184)
T ss_dssp HHHHHHHHTCCSSSEEEE
T ss_pred HHHHHHHcCCCcCCEEEE
Confidence 456789999999999987
No 325
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=33.67 E-value=29 Score=28.76 Aligned_cols=39 Identities=10% Similarity=0.007 Sum_probs=26.0
Q ss_pred ChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhh
Q psy8428 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (328)
Q Consensus 119 ~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~ 168 (328)
+.+..+++||+++|++++ +| + +- .++.+.+++.+-|++.
T Consensus 143 ~~~~a~~~gv~gtPt~vv--ng-~------~~--~~~~~~e~l~~~i~~l 181 (193)
T 3hz8_A 143 MQELTETFQIDGVPTVIV--GG-K------YK--VEFADWESGMNTIDLL 181 (193)
T ss_dssp HHHHHHHTTCCSSSEEEE--TT-T------EE--ECCSSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcCCEEEE--CC-E------EE--ecCCCHHHHHHHHHHH
Confidence 456789999999999997 33 1 22 1333677777766554
No 326
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=31.56 E-value=21 Score=29.11 Aligned_cols=42 Identities=14% Similarity=0.189 Sum_probs=28.5
Q ss_pred ChhhHHHcCCCcCceEEEecCCCCCCCCCceeeee-cccCHHHHHHHHHhhc
Q psy8428 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQR-VGYSAEAIVKWIADRT 169 (328)
Q Consensus 119 ~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~-~~~~a~~l~~fl~~~t 169 (328)
+.+..+++||+++|++++ +| + +.... |..+.+++.+.|++.+
T Consensus 151 ~~~~a~~~gv~gtPt~~i--ng-~------~~~~~~g~~~~~~l~~~i~~~l 193 (195)
T 3c7m_A 151 WKASYDVAKIQGVPAYVV--NG-K------YLIYTKSIKSIDAMADLIRELA 193 (195)
T ss_dssp GGGHHHHHHHHCSSEEEE--TT-T------EEECGGGCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCccCEEEE--CC-E------EEeccCCCCCHHHHHHHHHHHH
Confidence 556788999999999765 33 1 22111 4457888888887654
No 327
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=31.13 E-value=32 Score=28.44 Aligned_cols=42 Identities=10% Similarity=0.052 Sum_probs=28.5
Q ss_pred ChhhHHHcCCCcCceEEEecCCCCCCCCCceee-eecccCHHHHHHHHHhhc
Q psy8428 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDI-QRVGYSAEAIVKWIADRT 169 (328)
Q Consensus 119 ~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~-~~~~~~a~~l~~fl~~~t 169 (328)
+.+..+++||+++|++++ +| +|.. ..|..+.+++.+-|++.+
T Consensus 141 ~~~~a~~~gv~GtPtfvv--ng-------~~~v~~~Ga~~~e~~~~~i~~ll 183 (185)
T 3feu_A 141 AKMLSEKSGISSVPTFVV--NG-------KYNVLIGGHDDPKQIADTIRYLL 183 (185)
T ss_dssp HHHHHHHHTCCSSSEEEE--TT-------TEEECGGGCSSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCccCEEEE--CC-------EEEEecCCCCCHHHHHHHHHHHH
Confidence 556789999999999997 22 2322 135567777777776543
No 328
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=29.01 E-value=40 Score=27.98 Aligned_cols=41 Identities=7% Similarity=0.043 Sum_probs=0.0
Q ss_pred CcCChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHh
Q psy8428 116 FDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIAD 167 (328)
Q Consensus 116 ~~~~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~ 167 (328)
+.++.+..+++|++++|++++ .| ....|..+.+.+.+.|.+
T Consensus 153 v~~~~~~a~~~Gv~G~Ptfvi--~g---------~~~~G~~~~~~l~~~l~~ 193 (203)
T 2imf_A 153 YDEQTHAAIERKVFGVPTMFL--GD---------EMWWGNDRLFMLESAMGR 193 (203)
T ss_dssp HHHHHHHHHHTTCCSSSEEEE--TT---------EEEESGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCcCCEEEE--CC---------EEEECCCCHHHHHHHHhc
No 329
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=27.40 E-value=44 Score=25.81 Aligned_cols=35 Identities=14% Similarity=0.282 Sum_probs=24.8
Q ss_pred EEEEEeeCCCCCCCccchhhHHHHHHHHHHcccccCCCCcEEEEEEECcCC
Q psy8428 69 AIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG 119 (328)
Q Consensus 69 vvV~ftA~~~~~~C~~C~~~~pef~~vA~s~~~~~~~~~~v~F~~vD~~~~ 119 (328)
.+.+++.+ +|+.|+....-+++ ..+-|-.+|+.++
T Consensus 4 Mi~iY~~~----~C~~c~ka~~~L~~------------~gi~~~~~di~~~ 38 (120)
T 3fz4_A 4 MLTFYEYP----KCSTCRRAKAELDD------------LAWDYDAIDIKKN 38 (120)
T ss_dssp SEEEEECS----SCHHHHHHHHHHHH------------HTCCEEEEETTTS
T ss_pred eEEEEeCC----CChHHHHHHHHHHH------------cCCceEEEEeccC
Confidence 35677888 99999987765542 1366777888764
No 330
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=23.60 E-value=4 Score=23.22 Aligned_cols=13 Identities=23% Similarity=0.572 Sum_probs=10.3
Q ss_pred CCCCccchhhHHH
Q psy8428 79 QRNCHICVSASDE 91 (328)
Q Consensus 79 ~~~C~~C~~~~pe 91 (328)
+..|+.|+++.|.
T Consensus 6 ~vqcpvcqq~mpa 18 (29)
T 3vhs_A 6 QVQCPVCQQMMPA 18 (29)
T ss_dssp EEECTTTCCEEEG
T ss_pred eeeChHHHHhCcH
Confidence 4479999998874
No 331
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=22.12 E-value=61 Score=26.97 Aligned_cols=38 Identities=13% Similarity=0.184 Sum_probs=26.7
Q ss_pred ChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHh
Q psy8428 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIAD 167 (328)
Q Consensus 119 ~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~ 167 (328)
+.+..+++|++++|++++ .| +.+ .|....+.+.++|.+
T Consensus 162 ~~~~a~~~Gv~GvPtfvv--~g------~~~---~G~~~~~~l~~~l~~ 199 (202)
T 3fz5_A 162 IGEDAVARGIFGSPFFLV--DD------EPF---WGWDRMEMMAEWIRT 199 (202)
T ss_dssp HHHHHHHTTCCSSSEEEE--TT------EEE---ESGGGHHHHHHHHHT
T ss_pred HHHHHHHCCCCcCCEEEE--CC------EEE---ecCCCHHHHHHHHhc
Confidence 445678899999999987 22 112 355667888888865
No 332
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=21.22 E-value=75 Score=27.41 Aligned_cols=42 Identities=12% Similarity=0.148 Sum_probs=29.8
Q ss_pred ChhhHHHcCCCcCceEEEecCCCCCCCCCceeeeecccCHHHHHHHHHhhcC
Q psy8428 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (328)
Q Consensus 119 ~~~lf~~l~v~svP~l~~f~p~g~~~~~~~~~~~~~~~~a~~l~~fl~~~t~ 170 (328)
+.+..+++||+++|++++ .+ ++.+ .|..+.+.+.+.|++...
T Consensus 172 ~~~~a~~~Gv~GvPtfvv--~g-------~~~v-~Ga~~~e~~~~~i~~~~~ 213 (239)
T 3gl5_A 172 DEREAAQLGATGVPFFVL--DR-------AYGV-SGAQPAEVFTQALTQAWG 213 (239)
T ss_dssp HHHHHHHTTCCSSSEEEE--TT-------TEEE-ESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCeeCeEEE--CC-------cEee-cCCCCHHHHHHHHHHHHh
Confidence 345678999999999986 22 2333 366778888888877654
Done!