Query psy8429
Match_columns 314
No_of_seqs 200 out of 1447
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 18:37:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8429.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8429hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ga4_A Dolichyl-diphosphooligo 100.0 1.6E-34 5.6E-39 249.9 13.1 150 33-184 5-167 (178)
2 3h79_A Thioredoxin-like protei 99.8 3.9E-19 1.3E-23 143.6 13.8 114 44-168 13-126 (127)
3 2qsi_A Putative hydrogenase ex 99.8 2.6E-19 8.9E-24 148.0 10.3 111 41-169 10-122 (137)
4 2qgv_A Hydrogenase-1 operon pr 99.8 1.7E-19 5.7E-24 149.7 9.0 109 42-170 14-125 (140)
5 3zzx_A Thioredoxin; oxidoreduc 99.8 1.2E-18 4.1E-23 137.6 11.1 102 48-168 2-104 (105)
6 2av4_A Thioredoxin-like protei 99.8 4.2E-18 1.4E-22 143.5 11.0 124 48-183 23-156 (160)
7 3hxs_A Thioredoxin, TRXP; elec 99.8 9.9E-18 3.4E-22 137.2 12.9 112 44-171 20-140 (141)
8 3gnj_A Thioredoxin domain prot 99.7 1E-17 3.5E-22 130.8 11.2 108 45-170 3-110 (111)
9 2trx_A Thioredoxin; electron t 99.7 3E-17 1E-21 127.7 12.7 107 46-170 2-108 (108)
10 2voc_A Thioredoxin; electron t 99.7 7.3E-17 2.5E-21 127.3 13.0 106 47-172 2-107 (112)
11 2i4a_A Thioredoxin; acidophIle 99.7 7.9E-17 2.7E-21 124.7 12.7 106 46-169 2-107 (107)
12 3die_A Thioredoxin, TRX; elect 99.7 5E-17 1.7E-21 125.7 11.3 105 45-169 2-106 (106)
13 2dml_A Protein disulfide-isome 99.7 6E-17 2.1E-21 130.5 12.2 109 45-170 16-124 (130)
14 3uvt_A Thioredoxin domain-cont 99.7 7.1E-17 2.4E-21 125.8 11.9 106 46-168 5-110 (111)
15 1thx_A Thioredoxin, thioredoxi 99.7 9.3E-17 3.2E-21 126.0 12.5 110 44-171 5-114 (115)
16 2o8v_B Thioredoxin 1; disulfid 99.7 8.6E-17 2.9E-21 130.6 12.0 107 46-170 22-128 (128)
17 3tco_A Thioredoxin (TRXA-1); d 99.7 1.2E-16 4E-21 124.0 12.1 106 45-169 3-108 (109)
18 2l5l_A Thioredoxin; structural 99.7 1.6E-16 5.6E-21 129.8 13.2 112 46-173 9-129 (136)
19 1dby_A Chloroplast thioredoxin 99.7 1.5E-16 5E-21 123.6 12.1 105 47-169 2-106 (107)
20 3aps_A DNAJ homolog subfamily 99.7 8E-17 2.7E-21 128.4 10.7 110 46-170 3-113 (122)
21 2ppt_A Thioredoxin-2; thiredox 99.7 1.3E-16 4.4E-21 134.1 12.4 107 46-171 47-153 (155)
22 1x5d_A Protein disulfide-isome 99.7 1.1E-16 3.9E-21 129.0 11.4 114 45-172 6-119 (133)
23 1x5e_A Thioredoxin domain cont 99.7 1.1E-16 3.8E-21 128.5 11.2 108 45-173 6-113 (126)
24 1mek_A Protein disulfide isome 99.7 1.8E-16 6.1E-21 124.9 11.5 115 44-172 5-119 (120)
25 1t00_A Thioredoxin, TRX; redox 99.7 2.2E-16 7.4E-21 123.8 11.6 107 46-170 5-111 (112)
26 2dj3_A Protein disulfide-isome 99.7 5.2E-17 1.8E-21 131.4 8.3 116 45-173 6-121 (133)
27 1nsw_A Thioredoxin, TRX; therm 99.7 2.2E-16 7.6E-21 122.1 11.0 103 48-169 2-104 (105)
28 2yzu_A Thioredoxin; redox prot 99.7 3.4E-16 1.2E-20 121.2 12.0 106 47-171 2-107 (109)
29 2i1u_A Thioredoxin, TRX, MPT46 99.7 1.7E-16 5.8E-21 125.9 10.2 109 44-170 10-118 (121)
30 1fb6_A Thioredoxin M; electron 99.7 3.2E-16 1.1E-20 120.9 11.5 103 48-168 2-104 (105)
31 3hz4_A Thioredoxin; NYSGXRC, P 99.7 1.8E-16 6.2E-21 130.3 10.7 109 45-171 5-113 (140)
32 1w4v_A Thioredoxin, mitochondr 99.7 2.3E-16 7.9E-21 125.9 11.0 107 46-170 13-119 (119)
33 3d6i_A Monothiol glutaredoxin- 99.7 3.3E-16 1.1E-20 122.9 11.7 107 47-169 1-108 (112)
34 2djj_A PDI, protein disulfide- 99.7 1.4E-16 4.7E-21 126.6 9.5 114 45-172 6-119 (121)
35 1gh2_A Thioredoxin-like protei 99.7 5.3E-16 1.8E-20 120.9 12.3 105 47-170 2-107 (107)
36 2pu9_C TRX-F, thioredoxin F-ty 99.7 5.4E-16 1.8E-20 121.6 12.1 106 45-169 4-110 (111)
37 3qou_A Protein YBBN; thioredox 99.7 4E-16 1.4E-20 142.6 12.9 108 45-169 6-113 (287)
38 1oaz_A Thioredoxin 1; immune s 99.7 1.8E-16 6E-21 128.0 9.3 107 46-170 3-123 (123)
39 2dj1_A Protein disulfide-isome 99.7 3.7E-16 1.3E-20 127.4 11.2 113 44-173 15-127 (140)
40 3qfa_C Thioredoxin; protein-pr 99.7 2.4E-16 8.4E-21 125.4 9.8 105 46-169 12-116 (116)
41 3p2a_A Thioredoxin 2, putative 99.7 4E-16 1.4E-20 129.0 11.4 108 45-171 37-144 (148)
42 3evi_A Phosducin-like protein 99.7 3.5E-16 1.2E-20 126.2 10.5 109 46-168 3-112 (118)
43 2e0q_A Thioredoxin; electron t 99.7 3.6E-16 1.2E-20 119.8 10.2 103 48-170 1-103 (104)
44 3q6o_A Sulfhydryl oxidase 1; p 99.7 6.8E-16 2.3E-20 138.4 12.2 118 45-173 11-130 (244)
45 1xwb_A Thioredoxin; dimerizati 99.6 8.8E-16 3E-20 118.6 10.8 104 48-169 2-106 (106)
46 3ed3_A Protein disulfide-isome 99.6 8.2E-16 2.8E-20 142.8 12.6 117 45-174 16-146 (298)
47 2es7_A Q8ZP25_salty, putative 99.6 2.5E-16 8.7E-21 130.9 7.8 107 47-173 18-128 (142)
48 1ep7_A Thioredoxin CH1, H-type 99.6 7.4E-16 2.5E-20 120.5 9.9 108 46-170 2-111 (112)
49 3f8u_A Protein disulfide-isome 99.6 7.9E-16 2.7E-20 150.8 11.3 112 46-173 1-112 (481)
50 1v98_A Thioredoxin; oxidoreduc 99.6 1.2E-15 4.1E-20 124.9 10.6 106 46-170 33-138 (140)
51 2r2j_A Thioredoxin domain-cont 99.6 8.7E-16 3E-20 146.9 11.2 117 46-174 5-121 (382)
52 3m9j_A Thioredoxin; oxidoreduc 99.6 1.9E-15 6.6E-20 116.6 11.0 103 48-169 2-105 (105)
53 1faa_A Thioredoxin F; electron 99.6 2E-15 6.7E-20 120.7 11.3 106 45-169 17-123 (124)
54 2dj0_A Thioredoxin-related tra 99.6 1.1E-16 3.6E-21 130.9 3.9 85 46-140 7-97 (137)
55 1r26_A Thioredoxin; redox-acti 99.6 1.3E-15 4.6E-20 123.2 10.3 103 47-170 20-123 (125)
56 4euy_A Uncharacterized protein 99.6 6.3E-16 2.1E-20 120.3 7.4 101 49-169 3-104 (105)
57 2vlu_A Thioredoxin, thioredoxi 99.6 4E-15 1.4E-19 118.4 12.1 107 47-171 14-121 (122)
58 2vim_A Thioredoxin, TRX; thior 99.6 4.1E-15 1.4E-19 114.4 11.6 103 48-169 1-104 (104)
59 2xc2_A Thioredoxinn; oxidoredu 99.6 2E-15 6.7E-20 119.6 9.7 104 46-169 13-117 (117)
60 2dbc_A PDCL2, unnamed protein 99.6 5.6E-15 1.9E-19 121.0 12.5 111 46-176 10-127 (135)
61 3apq_A DNAJ homolog subfamily 99.6 2.8E-15 9.5E-20 131.5 11.0 109 46-173 97-205 (210)
62 1xfl_A Thioredoxin H1; AT3G510 99.6 4.5E-15 1.5E-19 119.6 11.4 107 45-169 15-123 (124)
63 2b5e_A Protein disulfide-isome 99.6 4.2E-15 1.4E-19 146.7 13.5 114 45-174 13-126 (504)
64 2wz9_A Glutaredoxin-3; protein 99.6 5.8E-15 2E-19 123.1 12.1 109 45-172 11-120 (153)
65 3idv_A Protein disulfide-isome 99.6 3.9E-15 1.3E-19 131.8 11.2 111 45-172 14-124 (241)
66 3idv_A Protein disulfide-isome 99.6 1.1E-14 3.8E-19 128.9 14.0 109 47-172 131-239 (241)
67 1syr_A Thioredoxin; SGPP, stru 99.6 9E-15 3.1E-19 115.0 11.2 103 46-169 9-111 (112)
68 3dxb_A Thioredoxin N-terminall 99.6 9.5E-15 3.3E-19 129.4 12.6 109 46-172 12-120 (222)
69 1ti3_A Thioredoxin H, PTTRXH1; 99.6 5.8E-15 2E-19 115.4 9.8 106 46-169 4-111 (113)
70 3gix_A Thioredoxin-like protei 99.6 9.1E-15 3.1E-19 122.0 11.6 119 52-182 10-137 (149)
71 3us3_A Calsequestrin-1; calciu 99.6 7.5E-15 2.6E-19 139.9 12.5 111 45-174 12-128 (367)
72 2vm1_A Thioredoxin, thioredoxi 99.6 6.4E-15 2.2E-19 116.0 10.0 109 44-170 4-114 (118)
73 3cxg_A Putative thioredoxin; m 99.6 3.9E-15 1.3E-19 121.5 8.9 108 45-170 19-129 (133)
74 3f3q_A Thioredoxin-1; His TAG, 99.6 1.1E-14 3.6E-19 114.4 10.9 100 48-168 9-108 (109)
75 3emx_A Thioredoxin; structural 99.6 3.2E-15 1.1E-19 122.1 8.1 105 45-172 15-128 (135)
76 2j23_A Thioredoxin; immune pro 99.6 7.9E-15 2.7E-19 117.3 9.8 106 45-169 14-120 (121)
77 1sji_A Calsequestrin 2, calseq 99.6 1.3E-14 4.6E-19 136.9 12.7 110 45-174 10-126 (350)
78 2l57_A Uncharacterized protein 99.6 4.7E-15 1.6E-19 119.0 8.0 112 46-172 4-119 (126)
79 2c0g_A ERP29 homolog, windbeut 99.6 1.5E-14 5.3E-19 131.0 11.9 111 45-172 15-134 (248)
80 1qgv_A Spliceosomal protein U5 99.6 2E-14 6.9E-19 118.9 11.0 119 52-182 10-137 (142)
81 3d22_A TRXH4, thioredoxin H-ty 99.5 1.1E-14 3.8E-19 118.8 8.8 108 46-171 24-133 (139)
82 2l6c_A Thioredoxin; oxidoreduc 99.5 2.2E-14 7.4E-19 112.8 9.4 101 49-170 6-106 (110)
83 2djk_A PDI, protein disulfide- 99.5 3.4E-14 1.2E-18 116.0 10.4 104 48-170 8-115 (133)
84 2qc7_A ERP31, ERP28, endoplasm 99.5 4.4E-14 1.5E-18 127.5 11.7 107 44-169 3-118 (240)
85 3uem_A Protein disulfide-isome 99.5 7.2E-14 2.5E-18 131.8 13.8 109 46-170 249-357 (361)
86 2f51_A Thioredoxin; electron t 99.5 7.2E-14 2.5E-18 111.4 11.6 110 46-171 3-114 (118)
87 3ul3_B Thioredoxin, thioredoxi 99.5 2.5E-14 8.6E-19 115.4 9.0 88 65-168 41-128 (128)
88 2yj7_A LPBCA thioredoxin; oxid 99.3 8E-16 2.7E-20 118.3 0.0 104 47-168 2-105 (106)
89 3t58_A Sulfhydryl oxidase 1; o 99.5 6.9E-14 2.4E-18 139.2 12.8 118 45-173 11-130 (519)
90 2trc_P Phosducin, MEKA, PP33; 99.5 3.8E-14 1.3E-18 125.9 9.8 109 47-168 100-211 (217)
91 2oe3_A Thioredoxin-3; electron 99.5 5.3E-14 1.8E-18 111.6 9.4 99 48-167 14-113 (114)
92 3apo_A DNAJ homolog subfamily 99.5 6.5E-14 2.2E-18 145.1 12.2 110 46-174 116-225 (780)
93 1zma_A Bacterocin transport ac 99.5 1.7E-14 5.9E-19 114.4 6.1 104 45-167 11-118 (118)
94 3apo_A DNAJ homolog subfamily 99.5 1.8E-13 6.1E-18 141.8 15.3 133 29-173 526-659 (780)
95 1wou_A Thioredoxin -related pr 99.5 1.3E-13 4.6E-18 110.6 11.1 106 48-167 7-122 (123)
96 1a0r_P Phosducin, MEKA, PP33; 99.5 5.4E-14 1.8E-18 127.2 9.6 124 34-170 96-226 (245)
97 3qcp_A QSOX from trypanosoma b 99.5 1E-14 3.5E-19 142.9 3.2 92 45-141 22-115 (470)
98 3f8u_A Protein disulfide-isome 99.5 2.3E-13 8E-18 133.2 12.8 113 47-174 353-465 (481)
99 1a8l_A Protein disulfide oxido 99.5 5.1E-13 1.7E-17 117.5 12.8 110 46-169 116-225 (226)
100 3iv4_A Putative oxidoreductase 99.5 1.6E-13 5.4E-18 109.3 8.1 100 46-165 6-111 (112)
101 2kuc_A Putative disulphide-iso 99.4 9.9E-14 3.4E-18 111.4 6.9 111 47-172 7-123 (130)
102 1wmj_A Thioredoxin H-type; str 99.4 3E-14 1E-18 114.2 3.5 109 46-172 14-124 (130)
103 2b5e_A Protein disulfide-isome 99.4 8.9E-13 3E-17 130.0 13.1 113 46-173 358-470 (504)
104 1fo5_A Thioredoxin; disulfide 99.4 7.3E-13 2.5E-17 98.1 9.4 82 68-169 4-85 (85)
105 1nho_A Probable thioredoxin; b 99.4 5.5E-13 1.9E-17 98.8 8.6 81 69-169 4-84 (85)
106 2fwh_A Thiol:disulfide interch 99.4 5.4E-13 1.9E-17 108.5 8.2 111 47-172 12-130 (134)
107 3fk8_A Disulphide isomerase; A 99.4 7.5E-13 2.6E-17 106.9 7.4 89 66-169 29-132 (133)
108 2ywm_A Glutaredoxin-like prote 99.4 3.4E-12 1.2E-16 112.6 11.9 103 46-170 118-220 (229)
109 3uem_A Protein disulfide-isome 99.4 5E-12 1.7E-16 119.1 13.1 127 29-170 100-230 (361)
110 3f9u_A Putative exported cytoc 99.3 2.1E-12 7.1E-17 109.1 7.9 108 48-170 28-166 (172)
111 2hls_A Protein disulfide oxido 99.3 5.5E-11 1.9E-15 106.9 14.2 109 48-174 122-230 (243)
112 2ju5_A Thioredoxin disulfide i 99.2 1.6E-11 5.5E-16 102.4 8.0 89 66-170 47-152 (154)
113 1z6n_A Hypothetical protein PA 99.2 8.9E-12 3E-16 106.2 5.6 82 48-142 38-122 (167)
114 2ywm_A Glutaredoxin-like prote 99.2 4.3E-11 1.5E-15 105.5 9.9 80 81-170 36-115 (229)
115 2lst_A Thioredoxin; structural 98.8 2.2E-12 7.5E-17 103.6 0.0 95 66-173 19-119 (130)
116 1a8l_A Protein disulfide oxido 99.2 7.6E-11 2.6E-15 103.4 9.8 100 54-169 10-112 (226)
117 3kp8_A Vkorc1/thioredoxin doma 99.2 4.4E-11 1.5E-15 94.1 6.5 73 68-167 14-92 (106)
118 3dml_A Putative uncharacterize 99.2 3.4E-11 1.2E-15 96.6 5.9 90 67-170 19-110 (116)
119 3ira_A Conserved protein; meth 99.1 2.5E-11 8.6E-16 104.1 4.5 81 50-143 26-117 (173)
120 1ttz_A Conserved hypothetical 99.1 5.9E-11 2E-15 90.3 6.1 75 70-170 3-77 (87)
121 1ilo_A Conserved hypothetical 99.1 1.7E-10 5.9E-15 83.9 8.0 73 70-165 3-76 (77)
122 2fgx_A Putative thioredoxin; N 99.1 8.9E-11 3E-15 92.8 6.6 77 68-165 30-106 (107)
123 2b5x_A YKUV protein, TRXY; thi 99.1 3.5E-10 1.2E-14 91.5 10.4 104 49-170 15-145 (148)
124 1lu4_A Soluble secreted antige 99.1 3.8E-10 1.3E-14 90.1 10.4 86 67-169 25-135 (136)
125 1sen_A Thioredoxin-like protei 99.1 7.2E-11 2.5E-15 99.7 5.3 104 54-170 37-148 (164)
126 3erw_A Sporulation thiol-disul 99.1 5.9E-10 2E-14 89.8 10.0 87 65-165 33-144 (145)
127 1zzo_A RV1677; thioredoxin fol 99.1 9.2E-10 3.2E-14 87.6 10.8 87 67-170 26-135 (136)
128 3raz_A Thioredoxin-related pro 99.0 6.6E-10 2.2E-14 91.3 9.5 92 66-171 24-141 (151)
129 2lja_A Putative thiol-disulfid 99.0 9.3E-10 3.2E-14 90.0 10.3 93 66-172 30-145 (152)
130 3or5_A Thiol:disulfide interch 99.0 8.9E-10 3E-14 91.2 10.3 93 66-172 34-153 (165)
131 2f9s_A Thiol-disulfide oxidore 99.0 1.1E-09 3.8E-14 89.6 10.8 93 66-172 26-140 (151)
132 3ph9_A Anterior gradient prote 99.0 1.1E-10 3.8E-15 97.9 4.6 94 66-170 44-145 (151)
133 2h30_A Thioredoxin, peptide me 99.0 7.7E-10 2.6E-14 91.6 8.3 112 47-170 22-156 (164)
134 4evm_A Thioredoxin family prot 99.0 2.4E-09 8.1E-14 84.9 10.4 88 66-168 22-137 (138)
135 3fkf_A Thiol-disulfide oxidore 99.0 3E-09 1E-13 86.1 11.0 88 66-170 33-146 (148)
136 3hcz_A Possible thiol-disulfid 99.0 1.6E-09 5.5E-14 87.7 9.2 89 66-168 31-144 (148)
137 3ewl_A Uncharacterized conserv 99.0 1.8E-09 6E-14 87.4 9.1 88 66-170 27-141 (142)
138 3gl3_A Putative thiol:disulfid 99.0 3.1E-09 1.1E-13 86.8 10.6 93 66-172 28-144 (152)
139 3lor_A Thiol-disulfide isomera 99.0 3.6E-09 1.2E-13 87.1 10.7 91 66-170 30-155 (160)
140 2l5o_A Putative thioredoxin; s 99.0 5.4E-09 1.8E-13 85.4 11.5 92 67-172 29-143 (153)
141 2lrn_A Thiol:disulfide interch 99.0 3.2E-09 1.1E-13 87.2 9.9 88 67-171 30-142 (152)
142 1hyu_A AHPF, alkyl hydroperoxi 98.9 1.1E-09 3.8E-14 108.7 8.4 133 47-203 100-234 (521)
143 3hdc_A Thioredoxin family prot 98.9 4.1E-09 1.4E-13 87.2 10.1 93 66-172 41-154 (158)
144 3eyt_A Uncharacterized protein 98.9 4.8E-09 1.6E-13 86.3 10.1 92 66-171 28-153 (158)
145 4f9z_D Endoplasmic reticulum r 98.9 1.7E-08 5.9E-13 89.2 13.9 120 34-169 101-224 (227)
146 3eur_A Uncharacterized protein 98.9 4.4E-09 1.5E-13 85.4 9.1 85 66-167 31-142 (142)
147 3ia1_A THIO-disulfide isomeras 98.9 4.3E-09 1.5E-13 86.3 8.8 89 67-172 31-146 (154)
148 3kp9_A Vkorc1/thioredoxin doma 98.9 5.7E-10 1.9E-14 103.1 3.3 75 70-166 201-276 (291)
149 3ha9_A Uncharacterized thiored 98.9 1.2E-08 4.2E-13 84.7 10.4 88 65-170 36-164 (165)
150 3lwa_A Secreted thiol-disulfid 98.9 1E-08 3.6E-13 86.8 9.8 95 66-169 59-180 (183)
151 3kcm_A Thioredoxin family prot 98.8 1.5E-08 5.1E-13 82.9 9.9 93 66-172 28-145 (154)
152 2hls_A Protein disulfide oxido 98.8 2E-08 6.9E-13 90.0 10.1 97 54-168 15-115 (243)
153 3s9f_A Tryparedoxin; thioredox 98.8 1.5E-08 5.2E-13 85.0 8.7 69 67-143 49-142 (165)
154 1i5g_A Tryparedoxin II; electr 98.8 1.6E-08 5.4E-13 82.1 8.3 69 66-142 28-121 (144)
155 1o8x_A Tryparedoxin, TRYX, TXN 98.8 1.6E-08 5.5E-13 82.4 8.3 69 66-142 28-121 (146)
156 2b1k_A Thiol:disulfide interch 98.8 1.2E-08 4.1E-13 85.0 7.6 87 66-170 51-160 (168)
157 1wjk_A C330018D20RIK protein; 98.8 1.2E-08 4E-13 79.2 6.8 80 66-170 15-96 (100)
158 1kng_A Thiol:disulfide interch 98.8 1.9E-08 6.4E-13 82.3 8.1 87 66-169 42-151 (156)
159 4fo5_A Thioredoxin-like protei 98.8 3E-08 1E-12 80.5 9.1 86 65-167 31-142 (143)
160 1o73_A Tryparedoxin; electron 98.7 1.9E-08 6.6E-13 81.4 7.8 68 67-142 29-121 (144)
161 3fw2_A Thiol-disulfide oxidore 98.7 7.2E-08 2.5E-12 78.8 11.2 87 66-169 33-147 (150)
162 2lus_A Thioredoxion; CR-Trp16, 98.2 1.4E-09 4.6E-14 87.9 0.0 69 68-143 28-121 (143)
163 2k8s_A Thioredoxin; dimer, str 98.7 4.9E-09 1.7E-13 77.4 2.4 58 69-136 3-61 (80)
164 2dlx_A UBX domain-containing p 98.7 3.6E-08 1.2E-12 82.7 8.0 102 53-170 28-136 (153)
165 2lrt_A Uncharacterized protein 98.7 6.6E-08 2.2E-12 79.7 9.4 68 67-143 36-126 (152)
166 2ywi_A Hypothetical conserved 98.7 4.9E-08 1.7E-12 83.3 8.5 95 67-170 47-174 (196)
167 2cvb_A Probable thiol-disulfid 98.6 1E-07 3.5E-12 81.0 9.1 95 66-170 33-159 (188)
168 1jfu_A Thiol:disulfide interch 98.6 1.8E-07 6.2E-12 79.2 10.5 92 66-171 60-181 (186)
169 2hyx_A Protein DIPZ; thioredox 98.6 1.3E-07 4.5E-12 89.5 10.3 92 65-170 81-199 (352)
170 3kh7_A Thiol:disulfide interch 98.6 1.5E-07 5.2E-12 79.6 8.7 87 66-170 58-167 (176)
171 2ls5_A Uncharacterized protein 98.0 6.6E-09 2.3E-13 85.8 0.0 91 66-170 33-148 (159)
172 3u5r_E Uncharacterized protein 98.5 1.7E-07 5.8E-12 82.3 7.8 95 67-170 60-187 (218)
173 1ego_A Glutaredoxin; electron 98.5 7.8E-08 2.7E-12 71.1 4.7 75 70-169 3-83 (85)
174 2bmx_A Alkyl hydroperoxidase C 98.5 5.2E-07 1.8E-11 77.4 9.8 98 67-181 46-178 (195)
175 2e7p_A Glutaredoxin; thioredox 98.5 5.6E-08 1.9E-12 76.2 3.2 88 54-168 11-106 (116)
176 2ggt_A SCO1 protein homolog, m 98.5 6.1E-07 2.1E-11 73.8 9.4 94 67-170 24-161 (164)
177 3drn_A Peroxiredoxin, bacterio 98.4 6.6E-07 2.3E-11 74.2 8.2 68 67-143 30-123 (161)
178 1sji_A Calsequestrin 2, calseq 98.4 2.2E-06 7.6E-11 80.3 12.7 126 32-170 212-346 (350)
179 2rli_A SCO2 protein homolog, m 98.4 1.1E-06 3.9E-11 72.9 9.6 95 66-170 26-164 (171)
180 1we0_A Alkyl hydroperoxide red 98.4 1.1E-06 3.7E-11 74.7 9.4 102 67-182 32-171 (187)
181 1zof_A Alkyl hydroperoxide-red 98.4 8.7E-07 3E-11 76.1 8.6 103 66-182 33-174 (198)
182 2k6v_A Putative cytochrome C o 98.4 5.3E-07 1.8E-11 74.8 6.7 91 66-168 35-171 (172)
183 2p5q_A Glutathione peroxidase 98.3 2.5E-06 8.4E-11 70.6 9.1 90 67-170 33-168 (170)
184 1uul_A Tryparedoxin peroxidase 98.3 8.9E-07 3E-11 76.5 6.4 106 67-182 37-178 (202)
185 1qmv_A Human thioredoxin perox 98.3 1.1E-06 3.8E-11 75.5 6.8 106 67-182 35-176 (197)
186 2v1m_A Glutathione peroxidase; 98.3 2.6E-06 8.8E-11 70.4 8.6 42 67-117 32-73 (169)
187 2vup_A Glutathione peroxidase- 98.3 2.7E-06 9.4E-11 72.6 9.0 91 66-170 48-185 (190)
188 1zye_A Thioredoxin-dependent p 98.3 1.8E-06 6.1E-11 76.0 7.9 106 67-182 57-198 (220)
189 3dwv_A Glutathione peroxidase- 98.3 5.5E-06 1.9E-10 70.6 10.7 91 66-170 46-183 (187)
190 1xvw_A Hypothetical protein RV 98.3 1.8E-06 6E-11 71.1 7.4 86 68-167 38-157 (160)
191 2h01_A 2-Cys peroxiredoxin; th 98.3 1.4E-06 4.9E-11 74.4 6.9 103 67-182 32-172 (192)
192 3cmi_A Peroxiredoxin HYR1; thi 98.3 2.6E-06 9E-11 71.2 8.4 89 67-170 33-168 (171)
193 1eej_A Thiol:disulfide interch 98.2 2.1E-06 7.3E-11 75.2 7.5 91 64-168 84-209 (216)
194 1h75_A Glutaredoxin-like prote 98.2 7.3E-07 2.5E-11 65.2 3.7 71 70-168 3-76 (81)
195 3gyk_A 27KDA outer membrane pr 98.2 3.7E-06 1.3E-10 70.6 8.2 84 64-169 20-172 (175)
196 1r7h_A NRDH-redoxin; thioredox 98.2 2.6E-06 9E-11 61.0 6.2 69 70-166 3-74 (75)
197 2obi_A PHGPX, GPX-4, phospholi 98.2 4.2E-06 1.4E-10 70.8 7.9 42 67-117 48-89 (183)
198 2p31_A CL683, glutathione pero 98.2 4.3E-06 1.5E-10 70.7 7.9 90 66-169 49-180 (181)
199 2i81_A 2-Cys peroxiredoxin; st 98.1 3.3E-06 1.1E-10 73.9 6.8 102 67-181 53-192 (213)
200 1t3b_A Thiol:disulfide interch 98.1 7.1E-06 2.4E-10 71.7 7.5 84 64-168 84-209 (211)
201 4f9z_D Endoplasmic reticulum r 98.0 1.1E-05 3.6E-10 71.1 7.9 104 47-173 10-115 (227)
202 3us3_A Calsequestrin-1; calciu 98.0 3.5E-05 1.2E-09 72.8 11.7 130 33-173 215-351 (367)
203 2f8a_A Glutathione peroxidase 97.9 2.7E-05 9.1E-10 67.9 8.7 43 66-117 47-89 (208)
204 1v58_A Thiol:disulfide interch 97.9 1.9E-05 6.4E-10 70.5 7.7 88 67-172 98-235 (241)
205 3ztl_A Thioredoxin peroxidase; 97.9 1.7E-05 5.8E-10 69.7 7.4 90 66-168 69-196 (222)
206 2jsy_A Probable thiol peroxida 97.9 2.7E-05 9.1E-10 64.5 8.0 87 68-169 46-166 (167)
207 3bj5_A Protein disulfide-isome 97.9 8.1E-05 2.8E-09 61.5 10.9 112 47-173 15-130 (147)
208 3gkn_A Bacterioferritin comigr 97.9 3.9E-05 1.3E-09 63.1 8.4 90 68-168 37-160 (163)
209 2gs3_A PHGPX, GPX-4, phospholi 97.9 3.1E-05 1E-09 65.7 7.7 42 67-117 50-91 (185)
210 1kte_A Thioltransferase; redox 97.9 8.5E-06 2.9E-10 62.5 3.7 64 54-135 3-73 (105)
211 1xvq_A Thiol peroxidase; thior 97.9 5.1E-05 1.7E-09 63.8 8.7 89 67-171 45-169 (175)
212 3kij_A Probable glutathione pe 97.8 2.1E-05 7.1E-10 66.3 6.2 42 67-117 39-80 (180)
213 2lqo_A Putative glutaredoxin R 97.8 5.5E-05 1.9E-09 57.6 7.5 76 70-172 6-86 (92)
214 2b7k_A SCO1 protein; metalloch 97.8 2.3E-05 7.8E-10 67.5 5.7 93 67-170 42-179 (200)
215 1xzo_A BSSCO, hypothetical pro 97.8 0.00013 4.5E-09 60.3 10.3 92 67-170 34-172 (174)
216 2hze_A Glutaredoxin-1; thiored 97.8 1E-05 3.5E-10 63.6 3.1 55 69-136 20-81 (114)
217 3a2v_A Probable peroxiredoxin; 97.7 2.2E-05 7.5E-10 70.7 5.0 106 66-181 34-174 (249)
218 3ic4_A Glutaredoxin (GRX-1); s 97.7 2.8E-05 9.5E-10 58.2 3.7 69 70-166 14-91 (92)
219 2l4c_A Endoplasmic reticulum r 97.6 0.00051 1.7E-08 55.1 10.6 96 47-168 22-122 (124)
220 2yan_A Glutaredoxin-3; oxidore 97.6 6.7E-05 2.3E-09 57.9 4.8 65 54-135 8-77 (105)
221 3ec3_A Protein disulfide-isome 97.5 0.00043 1.5E-08 61.7 10.3 117 46-181 6-126 (250)
222 3h93_A Thiol:disulfide interch 97.5 0.0002 6.8E-09 60.8 7.7 41 66-116 25-65 (192)
223 2c0d_A Thioredoxin peroxidase 97.5 0.00025 8.5E-09 62.3 8.5 104 66-182 56-197 (221)
224 2cq9_A GLRX2 protein, glutared 97.5 7.1E-05 2.4E-09 60.3 4.6 62 54-136 18-86 (130)
225 3c1r_A Glutaredoxin-1; oxidize 97.5 4.6E-05 1.6E-09 60.4 3.3 64 54-135 16-87 (118)
226 2ht9_A Glutaredoxin-2; thiored 97.5 8.9E-05 3E-09 61.2 4.8 61 54-135 40-107 (146)
227 2r2j_A Thioredoxin domain-cont 97.5 0.00076 2.6E-08 63.7 11.8 121 33-170 206-329 (382)
228 3qmx_A Glutaredoxin A, glutare 97.5 0.00011 3.7E-09 56.5 4.8 55 65-135 13-72 (99)
229 2klx_A Glutaredoxin; thioredox 97.5 8.5E-05 2.9E-09 55.2 4.1 52 69-136 7-61 (89)
230 2pn8_A Peroxiredoxin-4; thiore 97.4 0.00021 7.2E-09 62.2 6.8 103 67-182 49-190 (211)
231 2h8l_A Protein disulfide-isome 97.4 0.0011 3.9E-08 58.9 11.5 116 45-180 5-123 (252)
232 2h8l_A Protein disulfide-isome 97.4 0.00079 2.7E-08 59.9 10.3 125 32-170 100-230 (252)
233 1un2_A DSBA, thiol-disulfide i 97.4 4.9E-05 1.7E-09 65.8 1.9 57 53-120 101-160 (197)
234 3ixr_A Bacterioferritin comigr 97.3 0.0008 2.7E-08 56.6 8.5 90 68-168 53-176 (179)
235 2a4v_A Peroxiredoxin DOT5; yea 97.3 0.00079 2.7E-08 55.1 8.2 57 68-132 37-113 (159)
236 4g2e_A Peroxiredoxin; redox pr 97.2 0.0002 6.8E-09 59.2 4.0 88 68-168 32-156 (157)
237 2khp_A Glutaredoxin; thioredox 97.2 0.0004 1.4E-08 51.7 5.3 51 69-135 7-61 (92)
238 1n8j_A AHPC, alkyl hydroperoxi 97.2 0.0012 4E-08 56.0 8.7 101 68-182 32-170 (186)
239 3ec3_A Protein disulfide-isome 97.2 0.0039 1.3E-07 55.3 12.6 124 33-172 103-230 (250)
240 3ed3_A Protein disulfide-isome 97.2 0.0033 1.1E-07 57.6 11.8 122 29-171 126-268 (298)
241 1fov_A Glutaredoxin 3, GRX3; a 97.1 0.00047 1.6E-08 49.8 4.7 50 70-135 3-56 (82)
242 3nzn_A Glutaredoxin; structura 97.1 0.0006 2.1E-08 52.2 5.4 71 68-165 22-101 (103)
243 3qpm_A Peroxiredoxin; oxidored 97.1 0.0012 4.3E-08 58.5 8.2 93 66-168 77-204 (240)
244 1prx_A HORF6; peroxiredoxin, h 97.1 0.0013 4.3E-08 57.9 7.8 107 66-182 32-182 (224)
245 1z6m_A Conserved hypothetical 97.1 0.0021 7.2E-08 53.4 8.6 46 63-116 24-69 (175)
246 3me7_A Putative uncharacterize 97.0 0.0024 8.1E-08 53.2 8.5 94 67-171 29-163 (170)
247 2i3y_A Epididymal secretory gl 97.0 0.0054 1.8E-07 53.6 10.9 42 66-117 56-97 (215)
248 3rhb_A ATGRXC5, glutaredoxin-C 97.0 0.00057 2E-08 53.1 4.1 50 70-135 21-78 (113)
249 2znm_A Thiol:disulfide interch 97.0 0.0019 6.7E-08 54.6 7.7 43 64-116 20-62 (195)
250 3hd5_A Thiol:disulfide interch 96.9 0.0015 5.2E-08 55.4 6.3 44 66-119 25-68 (195)
251 3gv1_A Disulfide interchange p 96.9 0.0023 7.8E-08 52.7 6.9 90 67-170 15-139 (147)
252 2v2g_A Peroxiredoxin 6; oxidor 96.8 0.0018 6.2E-08 57.4 6.7 105 68-182 31-178 (233)
253 3msz_A Glutaredoxin 1; alpha-b 96.8 0.00077 2.6E-08 49.4 3.1 74 69-170 5-87 (89)
254 1wik_A Thioredoxin-like protei 96.8 0.0022 7.6E-08 49.6 5.8 65 54-135 6-75 (109)
255 3tjj_A Peroxiredoxin-4; thiore 96.8 0.0029 9.8E-08 56.8 7.3 106 67-182 92-233 (254)
256 3h8q_A Thioredoxin reductase 3 96.7 0.0018 6.2E-08 50.6 5.2 62 54-136 8-76 (114)
257 4gqc_A Thiol peroxidase, perox 96.7 0.0004 1.4E-08 57.9 1.3 94 68-170 35-160 (164)
258 1xcc_A 1-Cys peroxiredoxin; un 96.7 0.0016 5.4E-08 57.1 5.1 106 67-182 33-179 (220)
259 2r37_A Glutathione peroxidase 96.6 0.012 4E-07 51.0 10.3 41 67-117 39-79 (207)
260 3hz8_A Thiol:disulfide interch 96.5 0.0034 1.2E-07 53.5 5.9 44 67-120 25-68 (193)
261 3ctg_A Glutaredoxin-2; reduced 96.5 0.00083 2.8E-08 54.0 1.8 64 54-135 28-99 (129)
262 2wfc_A Peroxiredoxin 5, PRDX5; 96.5 0.0041 1.4E-07 51.9 6.0 30 68-101 33-64 (167)
263 2ec4_A FAS-associated factor 1 96.4 0.025 8.7E-07 48.0 10.7 109 49-169 33-167 (178)
264 3p7x_A Probable thiol peroxida 96.4 0.0044 1.5E-07 51.1 5.7 93 68-167 48-165 (166)
265 1nm3_A Protein HI0572; hybrid, 96.4 0.0052 1.8E-07 54.0 6.5 90 68-168 35-165 (241)
266 1tp9_A Peroxiredoxin, PRX D (t 96.4 0.004 1.4E-07 51.3 5.4 30 68-101 37-68 (162)
267 1q98_A Thiol peroxidase, TPX; 96.3 0.0053 1.8E-07 50.5 5.8 28 68-99 45-73 (165)
268 2pwj_A Mitochondrial peroxired 96.3 0.0029 9.8E-08 53.0 4.2 57 67-132 45-107 (171)
269 3zrd_A Thiol peroxidase; oxido 96.3 0.0097 3.3E-07 51.0 7.7 72 67-143 79-177 (200)
270 4hde_A SCO1/SENC family lipopr 96.3 0.024 8.2E-07 47.1 9.9 44 67-117 33-77 (170)
271 2yzh_A Probable thiol peroxida 96.3 0.0052 1.8E-07 50.8 5.5 29 67-99 48-77 (171)
272 3q6o_A Sulfhydryl oxidase 1; p 96.2 0.026 9E-07 49.4 9.9 101 49-171 141-241 (244)
273 1psq_A Probable thiol peroxida 96.1 0.0056 1.9E-07 50.3 5.0 29 67-99 43-72 (163)
274 3l9v_A Putative thiol-disulfid 96.0 0.0027 9.2E-08 54.0 2.2 42 67-118 15-59 (189)
275 3uma_A Hypothetical peroxiredo 95.9 0.0074 2.5E-07 51.3 4.6 43 67-118 58-102 (184)
276 3mng_A Peroxiredoxin-5, mitoch 95.4 0.017 5.7E-07 48.6 5.0 57 67-132 45-107 (173)
277 3t58_A Sulfhydryl oxidase 1; o 94.9 0.094 3.2E-06 51.7 9.5 102 48-171 140-241 (519)
278 3l4n_A Monothiol glutaredoxin- 94.8 0.04 1.4E-06 44.1 5.3 65 54-136 5-76 (127)
279 1aba_A Glutaredoxin; electron 94.4 0.063 2.2E-06 39.2 5.3 55 70-136 2-70 (87)
280 2ct6_A SH3 domain-binding glut 94.2 0.077 2.6E-06 41.0 5.7 51 70-136 10-78 (111)
281 2wci_A Glutaredoxin-4; redox-a 94.2 0.032 1.1E-06 45.1 3.5 67 54-136 26-96 (135)
282 2axo_A Hypothetical protein AT 94.1 0.4 1.4E-05 43.3 11.0 79 66-167 42-140 (270)
283 3zyw_A Glutaredoxin-3; metal b 94.1 0.047 1.6E-06 42.4 4.1 55 70-136 18-77 (111)
284 1t1v_A SH3BGRL3, SH3 domain-bi 94.0 0.086 2.9E-06 39.1 5.4 51 70-136 4-66 (93)
285 3feu_A Putative lipoprotein; a 93.9 0.025 8.5E-07 47.8 2.4 40 67-118 23-62 (185)
286 2rem_A Disulfide oxidoreductas 93.7 0.11 3.8E-06 43.3 6.3 43 66-118 25-67 (193)
287 3ipz_A Monothiol glutaredoxin- 93.4 0.07 2.4E-06 41.1 4.0 55 70-136 20-79 (109)
288 1nm3_A Protein HI0572; hybrid, 93.3 0.15 5.1E-06 44.4 6.5 53 68-136 170-225 (241)
289 2wem_A Glutaredoxin-related pr 92.8 0.12 4.2E-06 40.6 4.6 55 70-136 22-82 (118)
290 3l9s_A Thiol:disulfide interch 92.5 0.065 2.2E-06 45.5 2.9 41 67-117 22-65 (191)
291 3sbc_A Peroxiredoxin TSA1; alp 92.5 0.27 9.1E-06 43.0 6.8 107 66-182 52-194 (216)
292 3keb_A Probable thiol peroxida 91.8 0.42 1.4E-05 41.9 7.4 94 68-169 50-175 (224)
293 3gx8_A Monothiol glutaredoxin- 91.5 0.45 1.5E-05 37.3 6.5 58 70-136 18-80 (121)
294 4dvc_A Thiol:disulfide interch 90.6 0.38 1.3E-05 39.3 5.6 30 67-100 22-51 (184)
295 4f82_A Thioredoxin reductase; 89.3 0.61 2.1E-05 39.3 5.9 31 67-101 49-80 (176)
296 1u6t_A SH3 domain-binding glut 89.1 0.72 2.5E-05 36.5 5.8 58 69-136 1-70 (121)
297 3gha_A Disulfide bond formatio 86.5 1.1 3.6E-05 38.2 5.7 50 61-118 24-74 (202)
298 3c7m_A Thiol:disulfide interch 85.9 1 3.6E-05 37.1 5.3 41 67-117 18-59 (195)
299 3tue_A Tryparedoxin peroxidase 84.2 0.85 2.9E-05 39.8 4.1 106 67-182 57-198 (219)
300 2wul_A Glutaredoxin related pr 82.1 2.9 9.9E-05 32.7 6.0 66 54-136 11-82 (118)
301 3f4s_A Alpha-DSBA1, putative u 81.9 2.1 7.1E-05 37.1 5.7 44 67-118 40-84 (226)
302 3bci_A Disulfide bond protein 79.4 2.6 9.1E-05 34.6 5.3 43 67-117 12-55 (186)
303 3gmf_A Protein-disulfide isome 76.7 4.8 0.00016 34.2 6.3 47 63-117 12-59 (205)
304 3gn3_A Putative protein-disulf 75.8 2.7 9.2E-05 35.1 4.3 41 68-117 16-56 (182)
305 4eo3_A Bacterioferritin comigr 75.8 5.6 0.00019 36.3 6.9 93 68-168 26-137 (322)
306 3tdg_A DSBG, putative uncharac 70.0 2.3 8E-05 38.3 2.7 27 67-97 148-174 (273)
307 1xiy_A Peroxiredoxin, pfaop; a 68.0 9.5 0.00032 31.8 6.0 31 68-101 45-77 (182)
308 2x8g_A Thioredoxin glutathione 67.1 3.2 0.00011 40.9 3.3 62 54-136 9-77 (598)
309 2kok_A Arsenate reductase; bru 66.9 7.9 0.00027 29.8 4.9 43 70-128 7-56 (120)
310 2jad_A Yellow fluorescent prot 62.3 3 0.0001 39.0 1.9 56 70-136 263-324 (362)
311 2in3_A Hypothetical protein; D 61.4 3.7 0.00013 34.4 2.2 47 117-169 163-209 (216)
312 1z3e_A Regulatory protein SPX; 50.0 15 0.00052 28.7 3.9 35 70-120 3-37 (132)
313 3bci_A Disulfide bond protein 46.7 10 0.00035 30.9 2.5 41 119-170 138-178 (186)
314 3l78_A Regulatory protein SPX; 44.0 22 0.00074 27.3 3.9 81 70-168 2-86 (120)
315 3kzq_A Putative uncharacterize 42.4 12 0.0004 31.3 2.2 45 119-169 158-202 (208)
316 3f4s_A Alpha-DSBA1, putative u 40.3 21 0.00073 30.6 3.6 50 120-170 160-211 (226)
317 2xhf_A Peroxiredoxin 5; oxidor 39.0 36 0.0012 27.9 4.7 54 68-129 44-101 (171)
318 3gha_A Disulfide bond formatio 34.8 41 0.0014 28.0 4.5 42 119-171 152-193 (202)
319 1rw1_A Conserved hypothetical 34.0 23 0.00077 26.8 2.5 35 70-120 2-36 (114)
320 2rem_A Disulfide oxidoreductas 31.4 25 0.00087 28.4 2.5 40 119-169 144-183 (193)
321 3fz4_A Putative arsenate reduc 30.7 36 0.0012 26.1 3.2 36 69-120 4-39 (120)
322 3hz8_A Thiol:disulfide interch 29.5 33 0.0011 28.2 3.0 40 119-169 143-182 (193)
323 3gkx_A Putative ARSC family re 28.7 34 0.0012 26.3 2.7 35 70-120 6-40 (120)
324 3gmf_A Protein-disulfide isome 27.1 56 0.0019 27.4 4.0 40 120-170 157-197 (205)
325 1un2_A DSBA, thiol-disulfide i 25.0 22 0.00074 29.8 1.0 18 119-136 39-56 (197)
326 3vhs_A ATPase wrnip1; zinc fin 22.7 4.1 0.00014 23.0 -2.6 13 79-91 6-18 (29)
327 2imf_A HCCA isomerase, 2-hydro 22.2 49 0.0017 27.2 2.7 41 116-167 153-193 (203)
328 2q67_A Potassium channel prote 20.9 2.6E+02 0.009 20.8 6.9 36 202-237 13-48 (114)
329 1s3c_A Arsenate reductase; ARS 20.1 47 0.0016 26.3 2.0 81 70-168 4-88 (141)
No 1
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=100.00 E-value=1.6e-34 Score=249.86 Aligned_cols=150 Identities=18% Similarity=0.295 Sum_probs=127.8
Q ss_pred HHHHHHHHhhhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCC---CCCccchhhHHHHHHHHHHhccccCCCCcE
Q psy8429 33 GDRVLHLSEMNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQ---RNCHICVSASDEYTIVANSFRYSQMYSNKL 109 (314)
Q Consensus 33 ~~~~~~L~~l~~~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~---~~C~~C~~~~pefe~vA~s~~~~~~~~~~v 109 (314)
.|++++|++++++++||+||++||++++ .++|+|+++|+|||++|+ .||++|+++.|+|+++|++|.+++++ +++
T Consensus 5 ~~~~~~l~~l~~~~~vi~lt~~nF~~~v-~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~-~~v 82 (178)
T 3ga4_A 5 SHNIDDILQLKDDTGVITVTADNYPLLS-RGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQ-SLN 82 (178)
T ss_dssp ---CHHHHTTCCTTSEEECCTTTHHHHT-TCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTT-CCE
T ss_pred hhhHHHHHHhhccCCCEECCHHHHHHHH-cccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCC-CCE
Confidence 3788999999999999999999999987 478999999999997765 69999999999999999999744333 579
Q ss_pred EEEEEECCCCcchHHhCCcccCceEEEecCCCCCC---------CCCccceeec-ccCHHHHHHHHHhhcCCcceeeCCC
Q psy8429 110 FFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPK---------PSDTLDIQRV-GYSAEAIVKWIADRTDIQIRVFRPP 179 (314)
Q Consensus 110 ~F~~vD~~~~~~lf~~~~v~svPtl~~f~p~~~~~---------~~~~~~~~~~-~~~a~~l~~fI~~~~~~~i~i~~p~ 179 (314)
.|++||+|++++++++|||+++||+++|++|++.. +.++|++..+ ++++++|++||+++|+++++|.||+
T Consensus 83 ~f~kvD~d~~~~la~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~I~rp~ 162 (178)
T 3ga4_A 83 LFFTVDVNEVPQLVKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISITVPQAF 162 (178)
T ss_dssp EEEEEETTTCHHHHHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCCCCCSC
T ss_pred EEEEEECccCHHHHHHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCccccCCC
Confidence 99999999999999999999999999999985433 3466777656 8999999999999999999999999
Q ss_pred CCchh
Q psy8429 180 NYSGP 184 (314)
Q Consensus 180 ~~~~~ 184 (314)
||+.-
T Consensus 163 ny~~~ 167 (178)
T 3ga4_A 163 NVQEE 167 (178)
T ss_dssp C----
T ss_pred ChHHh
Confidence 99753
No 2
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.81 E-value=3.9e-19 Score=143.55 Aligned_cols=114 Identities=10% Similarity=0.118 Sum_probs=95.0
Q ss_pred hCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchH
Q psy8429 44 AKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (314)
Q Consensus 44 ~~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (314)
..+.|++||+++|++.+.+. +..++|.|||+ ||++|+++.|+|+++|+.+... ...+++.|+++|++++++++
T Consensus 13 ~~~~v~~l~~~~f~~~~~~~--~~~vlv~F~a~----wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~~~vd~~~~~~l~ 85 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVMDP--EKDVFVLYYVP----WSRHSVAAMRLWDDLSMSQSQK-RNHLTFVAARIDGEKYPDVI 85 (127)
T ss_dssp CCCCCEECCTTTHHHHHTCT--TCEEEEEEECT----TCHHHHHHHHHHHHHHHHHHTS-TTTTTEEEEEEETTTCHHHH
T ss_pred CCCceEECChhhHHHHHhCC--CCCEEEEEECC----ccHHHHHHhHHHHHHHHHHHhc-ccCCCeEEEEEEccccHhHH
Confidence 34679999999999998532 45799999999 9999999999999999987531 22357999999999999999
Q ss_pred HhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhh
Q psy8429 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~ 168 (314)
++++|+++||+++|++|++.. ...+ .|+++.++|.+||+++
T Consensus 86 ~~~~v~~~Pt~~~~~~g~~~~---~~~~-~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 86 ERMRVSGFPTMRYYTRIDKQE---PFEY-SGQRYLSLVDSFVFQN 126 (127)
T ss_dssp HHTTCCSSSEEEEECSSCSSS---CEEC-CSCCCHHHHHHHHHHH
T ss_pred HhcCCccCCEEEEEeCCCCCC---ceEe-cCCccHHHHHHHHHhc
Confidence 999999999999999874421 1222 4789999999999876
No 3
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.79 E-value=2.6e-19 Score=148.04 Aligned_cols=111 Identities=11% Similarity=0.105 Sum_probs=92.1
Q ss_pred hhhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCC--ccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC
Q psy8429 41 EMNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNC--HICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE 118 (314)
Q Consensus 41 ~l~~~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C--~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~ 118 (314)
++..+.|..++|++||++.+.++ +-+++|+|||+ || ++|+++.|.++++|++|. +++.|+++|+|+
T Consensus 10 rl~~~~g~~~vt~~~F~~~v~~~--~~~vlVdF~A~----wCr~gpCk~iaPvleela~e~~------~~v~~~KVdvDe 77 (137)
T 2qsi_A 10 AAARPNAPTLVDEATVDDFIAHS--GKIVVLFFRGD----AVRFPEAADLAVVLPELINAFP------GRLVAAEVAAEA 77 (137)
T ss_dssp -------CEEECTTTHHHHHHTS--SSEEEEEECCC----TTTCTTHHHHHHHHHHHHHTST------TTEEEEEECGGG
T ss_pred HHHHhcCCcccCHhHHHHHHhcC--CCcEEEEEeCC----ccCCCchhhHHhHHHHHHHHcc------CCcEEEEEECCC
Confidence 34556788899999999998633 33699999999 99 999999999999999986 579999999999
Q ss_pred CcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 119 ~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
++++.++|+|+++||+++|++| + ..+...|..+.+++.++|++++
T Consensus 78 ~~~la~~ygV~siPTlilFkdG-~-----~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 78 ERGLMARFGVAVCPSLAVVQPE-R-----TLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp HHHHHHHHTCCSSSEEEEEECC-E-----EEEEEESCCCHHHHHHHHHHHH
T ss_pred CHHHHHHcCCccCCEEEEEECC-E-----EEEEEeCCCCHHHHHHHHHHHh
Confidence 9999999999999999999987 3 2344467788999999998876
No 4
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.79 E-value=1.7e-19 Score=149.72 Aligned_cols=109 Identities=6% Similarity=0.066 Sum_probs=94.8
Q ss_pred hhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCC--CccchhhHHHHHHHHHHhccccCCCCc-EEEEEEECCC
Q psy8429 42 MNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRN--CHICVSASDEYTIVANSFRYSQMYSNK-LFFILVDFDE 118 (314)
Q Consensus 42 l~~~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~--C~~C~~~~pefe~vA~s~~~~~~~~~~-v~F~~vD~~~ 118 (314)
+..+ |+.++|++||++.+. + +..++|+|+|+ | |++|+++.|.++++|++|. ++ +.|+++|+|+
T Consensus 14 l~~~-g~~~~t~~~F~~~v~-~--~~~vlVdF~a~----~crCgpCk~iaPvleela~e~~------g~~v~~~KVdvDe 79 (140)
T 2qgv_A 14 MLAR-GWTPVSESRLDDWLT-Q--APDGVVLLSSD----PKRTPEVSDNPVMIGELLHEFP------DYTWQVAIADLEQ 79 (140)
T ss_dssp HHHT-TCEECCHHHHHHHHH-T--CSSEEEEECCC----TTTCTTTTHHHHHHHHHHTTCT------TSCCEEEECCHHH
T ss_pred HHhc-CCccCCHHHHHHHHh-C--CCCEEEEEeCC----cccCCcHHHHHhHHHHHHHHcC------CCeEEEEEEECCC
Confidence 4455 999999999999984 3 34589999999 9 9999999999999999986 57 9999999999
Q ss_pred CcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 119 ~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
++++.++|+|+++||+++|++| +. .+...|..+.+++.+||++.+.
T Consensus 80 ~~~lA~~ygV~sIPTlilFk~G-~~-----v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 80 SEAIGDRFGAFRFPATLVFTGG-NY-----RGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp HHHHHHHHTCCSSSEEEEEETT-EE-----EEEEESCCCHHHHHHHHHHHHC
T ss_pred CHHHHHHcCCccCCEEEEEECC-EE-----EEEEecCCCHHHHHHHHHHHhc
Confidence 9999999999999999999987 32 3444677889999999998874
No 5
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.78 E-value=1.2e-18 Score=137.58 Aligned_cols=102 Identities=19% Similarity=0.355 Sum_probs=85.7
Q ss_pred eEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhC
Q psy8429 48 VLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (314)
Q Consensus 48 VI~Lt~-~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~ 126 (314)
|.++++ ++|++.+.+. .+..++|.|||+ ||+||+.+.|.++++|+.+. ++.|+++|++++++++++|
T Consensus 2 V~~i~~~~~f~~~l~~~-~~k~vvv~F~a~----wC~~C~~~~p~~~~~~~~~~-------~~~~~~vd~d~~~~l~~~~ 69 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEA-GNKLVVIDFYAT----WCGPCKMIAPKLEELSQSMS-------DVVFLKVDVDECEDIAQDN 69 (105)
T ss_dssp CEECCSHHHHHHHHHHT-TTSEEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TEEEEEEETTTCHHHHHHT
T ss_pred eEEeCCHHHHHHHHHhc-CCCEEEEEEECC----CCCCccCCCcchhhhhhccC-------CeEEEEEecccCHHHHHHc
Confidence 567765 7899988533 356799999999 99999999999999998874 5899999999999999999
Q ss_pred CcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhh
Q psy8429 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 127 ~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~ 168 (314)
+|+++||+++|+.| +. .+. ..|.+.++|.+||+++
T Consensus 70 ~V~~~PT~~~~~~G-~~-----v~~-~~G~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 70 QIACMPTFLFMKNG-QK-----LDS-LSGANYDKLLELVEKN 104 (105)
T ss_dssp TCCBSSEEEEEETT-EE-----EEE-EESCCHHHHHHHHHHH
T ss_pred CCCeecEEEEEECC-EE-----EEE-EeCcCHHHHHHHHHhc
Confidence 99999999999876 32 222 2457899999999875
No 6
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.75 E-value=4.2e-18 Score=143.52 Aligned_cols=124 Identities=16% Similarity=0.141 Sum_probs=94.0
Q ss_pred eEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhC
Q psy8429 48 VLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (314)
Q Consensus 48 VI~Lt~-~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~ 126 (314)
+.+|++ ++|++.+.+. .+..++|.|+|+ ||+||+.+.|.++++|+++. +++.|+++|+|+++++.++|
T Consensus 23 v~~l~t~~~f~~~v~~~-~~k~VVVdF~A~----WCgPCk~m~PvleelA~e~~------~~v~f~kVDVDe~~e~a~~y 91 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNE-DERLVCIRFGHD----YDPDCMKMDELLYKVADDIK------NFCVIYLVDITEVPDFNTMY 91 (160)
T ss_dssp CEECCSHHHHHHHHHHC-SSSEEEEEEECT----TSHHHHHHHHHHHHHHHHHT------TTEEEEEEETTTCCTTTTTT
T ss_pred hhccCCHHHHHHHHHhc-CCCEEEEEEECC----CChhHHHHHHHHHHHHHHcc------CCcEEEEEECCCCHHHHHHc
Confidence 667765 7999988631 255799999999 99999999999999999985 56999999999999999999
Q ss_pred CcccCceEEEecCCCCCC-C---CCccceeecccC-HHHHHHHHHhhcCC----cceeeCCCCCch
Q psy8429 127 RLNTAPIFMHFPAKGKPK-P---SDTLDIQRVGYS-AEAIVKWIADRTDI----QIRVFRPPNYSG 183 (314)
Q Consensus 127 ~v~svPtl~~f~p~~~~~-~---~~~~~~~~~~~~-a~~l~~fI~~~~~~----~i~i~~p~~~~~ 183 (314)
+|+++||+++|+.|+... + .+. +...|..+ .++|.++|++...- .--+..|.||+.
T Consensus 92 ~V~siPT~~fFk~G~~v~vd~Gtgd~-~k~vGa~~~k~~l~~~ie~~~r~a~~g~~~v~~p~~~~~ 156 (160)
T 2av4_A 92 ELYDPVSVMFFYRNKHMMIDLGTGNN-NKINWPMNNKQEFIDIVETIFRGARKGRGLVISPKDYST 156 (160)
T ss_dssp TCCSSEEEEEEETTEEEEEECSSSCC-SCBCSCCCCHHHHHHHHHHHHHHHHTTCSEEECSSCC--
T ss_pred CCCCCCEEEEEECCEEEEEecCCCCc-CeEEeecCCHHHHHHHHHHHHHHhhcCCeEEECCCccch
Confidence 999999999999873210 0 000 12235455 89999999876531 123557888853
No 7
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.75 E-value=9.9e-18 Score=137.19 Aligned_cols=112 Identities=17% Similarity=0.293 Sum_probs=93.7
Q ss_pred hCCCeEEeChhhHHHHHHcCC---------CCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEE
Q psy8429 44 AKKAVLRFDGQKYKEYIKNGP---------RNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILV 114 (314)
Q Consensus 44 ~~~~VI~Lt~~nf~~~v~~~~---------r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~v 114 (314)
..++++++|+++|++.+.+.. ++..++|+|||+ ||++|+.+.|.++++++.+. +++.|+.+
T Consensus 20 ~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~----wC~~C~~~~~~~~~~~~~~~------~~~~~~~v 89 (141)
T 3hxs_A 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYAD----WCGPCKMVAPILEELSKEYA------GKIYIYKV 89 (141)
T ss_dssp ---CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECT----TCTTHHHHHHHHHHHHHHTT------TTCEEEEE
T ss_pred CCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECC----CCHHHHHHHHHHHHHHHHhc------CceEEEEE
Confidence 346799999999999985422 356799999999 99999999999999999886 46999999
Q ss_pred ECCCCcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCC
Q psy8429 115 DFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (314)
Q Consensus 115 D~~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~ 171 (314)
|++++++++++|+++++|++++|.++|+. . ...|..+.+++.+||++.+..
T Consensus 90 ~~~~~~~~~~~~~v~~~Pt~~~~~~~g~~-----~-~~~G~~~~~~l~~~l~~~l~k 140 (141)
T 3hxs_A 90 NVDKEPELARDFGIQSIPTIWFVPMKGEP-----Q-VNMGALSKEQLKGYIDKVLLK 140 (141)
T ss_dssp ETTTCHHHHHHTTCCSSSEEEEECSSSCC-----E-EEESCCCHHHHHHHHHHTTC-
T ss_pred ECCCCHHHHHHcCCCCcCEEEEEeCCCCE-----E-EEeCCCCHHHHHHHHHHHHcc
Confidence 99999999999999999999999776543 1 235778999999999988753
No 8
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.74 E-value=1e-17 Score=130.84 Aligned_cols=108 Identities=19% Similarity=0.368 Sum_probs=92.3
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (314)
..+++++|+++|++.+.+. +..++|+|||+ ||++|+.+.|.++++++.+. +++.|+++|+++++++++
T Consensus 3 ~~~v~~l~~~~~~~~~~~~--~~~vlv~f~a~----~C~~C~~~~~~~~~~~~~~~------~~v~~~~vd~~~~~~l~~ 70 (111)
T 3gnj_A 3 AMSLEKLDTNTFEQLIYDE--GKACLVMFSRK----NCHVCQKVTPVLEELRLNYE------ESFGFYYVDVEEEKTLFQ 70 (111)
T ss_dssp CCCSEECCHHHHHHHHTTS--CCCEEEEEECS----SCHHHHHHHHHHHHHHHHTT------TTSEEEEEETTTCHHHHH
T ss_pred CCcceecCHHHHHHHHHhc--CCEEEEEEeCC----CChhHHHHHHHHHHHHHHcC------CceEEEEEECCcChhHHH
Confidence 3569999999999998433 45799999999 99999999999999999985 469999999999999999
Q ss_pred hCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 125 ~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
+++++++|++++|++| +. .....|..+.+++.+||++.++
T Consensus 71 ~~~v~~~Pt~~~~~~g-~~-----~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 71 RFSLKGVPQILYFKDG-EY-----KGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp HTTCCSSCEEEEEETT-EE-----EEEEESSCCHHHHHHHHHHHHH
T ss_pred hcCCCcCCEEEEEECC-EE-----EEEEeccCCHHHHHHHHHHHhc
Confidence 9999999999999765 32 2233567799999999998764
No 9
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.73 E-value=3e-17 Score=127.73 Aligned_cols=107 Identities=11% Similarity=0.211 Sum_probs=90.8
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
++|+++|+++|++.+.+ ++..++|+|+++ ||++|+.+.|.++++++.+. +++.|+.+|++++++++++
T Consensus 2 ~~v~~l~~~~f~~~~~~--~~~~~~v~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~~~v~~~~~~~~~~~ 69 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLK--ADGAILVDFWAE----WCGPCKMIAPILDEIADEYQ------GKLTVAKLNIDQNPGTAPK 69 (108)
T ss_dssp TTEEECCTTTHHHHTTT--CSSEEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTEEEEEEETTTCTTHHHH
T ss_pred CcceecchhhHHHHHHh--cCCeEEEEEECC----CCHhHHHHHHHHHHHHHHhC------CCcEEEEEECCCCHHHHHH
Confidence 56999999999987642 355799999999 99999999999999999885 4699999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
++++++|++++|+.| +. .....|..+.+++.+|+++.++
T Consensus 70 ~~v~~~Pt~~~~~~G-~~-----~~~~~G~~~~~~l~~~l~~~l~ 108 (108)
T 2trx_A 70 YGIRGIPTLLLFKNG-EV-----AATKVGALSKGQLKEFLDANLA 108 (108)
T ss_dssp TTCCSSSEEEEEETT-EE-----EEEEESCCCHHHHHHHHHHHHC
T ss_pred cCCcccCEEEEEeCC-EE-----EEEEecCCCHHHHHHHHHHhhC
Confidence 999999999999654 32 2223567789999999998753
No 10
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.72 E-value=7.3e-17 Score=127.29 Aligned_cols=106 Identities=12% Similarity=0.126 Sum_probs=91.1
Q ss_pred CeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhC
Q psy8429 47 AVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (314)
Q Consensus 47 ~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~ 126 (314)
.++++|+++|++.+ + +..++|+|+|+ ||++|+.+.|+++++++.+. +++.|+.+|+++++++++++
T Consensus 2 ~v~~l~~~~~~~~~-~---~~~~lv~f~a~----wC~~C~~~~~~l~~~~~~~~------~~v~~~~vd~~~~~~l~~~~ 67 (112)
T 2voc_A 2 AIVKATDQSFSAET-S---EGVVLADFWAP----WCGPSKMIAPVLEELDQEMG------DKLKIVKIDVDENQETAGKY 67 (112)
T ss_dssp CCEECCTTTHHHHH-S---SSEEEEEEECT----TBGGGGGHHHHHHHHHHHHT------TTCEEEEEETTTCCSHHHHT
T ss_pred CeEEecHHHHHHHh-C---CCEEEEEEECC----CCHHHHHHHHHHHHHHHHhC------CCcEEEEEECCCCHHHHHHc
Confidence 47899999999987 2 45689999999 99999999999999999885 46999999999999999999
Q ss_pred CcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 127 ~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
+++++|++++|+.| +. .....|..+.+++.+|++++++.+
T Consensus 68 ~v~~~Pt~~~~~~G-~~-----~~~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 68 GVMSIPTLLVLKDG-EV-----VETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp TCCSBSEEEEEETT-EE-----EEEEESCCCHHHHHHHHHTTSCSC
T ss_pred CCCcccEEEEEeCC-EE-----EEEEeCCCCHHHHHHHHHHHHHhh
Confidence 99999999999654 32 222357789999999999988754
No 11
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.72 E-value=7.9e-17 Score=124.74 Aligned_cols=106 Identities=14% Similarity=0.250 Sum_probs=90.0
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
++|+++|+++|++.+.+ ++..++++|+++ ||++|+.+.|+++++++.+. +++.|+.+|++++++++++
T Consensus 2 ~~v~~l~~~~~~~~~~~--~~~~~lv~f~~~----~C~~C~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~ 69 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLK--ASGLVLVDFWAE----WCGPCKMIGPALGEIGKEFA------GKVTVAKVNIDDNPETPNA 69 (107)
T ss_dssp CCEEECCTTTHHHHTTT--CSSEEEEEEECT----TCHHHHHHHHHHHHHHHHHT------TSEEEEEEETTTCCHHHHH
T ss_pred CceeecchhhhhHHHHh--CCCEEEEEEECC----CChhHHHHhHHHHHHHHHhC------CcEEEEEEECCCCHHHHHh
Confidence 56999999999988642 355799999999 99999999999999999885 4699999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
++++++|++++|+.| +. .....|..+.+++.+||++.+
T Consensus 70 ~~v~~~Pt~~~~~~G-~~-----~~~~~G~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 70 YQVRSIPTLMLVRDG-KV-----IDKKVGALPKSQLKAWVESAQ 107 (107)
T ss_dssp TTCCSSSEEEEEETT-EE-----EEEEESCCCHHHHHHHHHHTC
T ss_pred cCCCccCEEEEEeCC-EE-----EEEecCCCCHHHHHHHHHhcC
Confidence 999999999999654 32 222356778999999998753
No 12
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.71 E-value=5e-17 Score=125.66 Aligned_cols=105 Identities=15% Similarity=0.239 Sum_probs=90.1
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (314)
..+++++|+++|++.+ ++..++++|+++ ||++|+.+.|.++++++.+. +++.|+.+|+++++++++
T Consensus 2 ~~~v~~l~~~~~~~~~----~~~~~lv~f~~~----~C~~C~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~ 67 (106)
T 3die_A 2 HMAIVKVTDADFDSKV----ESGVQLVDFWAT----ACGPCKMIAPVLEELAADYE------GKADILKLDVDENPSTAA 67 (106)
T ss_dssp CCCCEECCTTTHHHHS----CSSEEEEEEECS----BCHHHHHHHHHHHHHHHHTT------TTCEEEEEETTTCHHHHH
T ss_pred CcceEECCHHHHHHHh----cCCcEEEEEECC----CCHHHHHHhHHHHHHHHHhc------CCcEEEEEECCcCHHHHH
Confidence 3569999999999987 245789999999 99999999999999999986 459999999999999999
Q ss_pred hCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 125 ~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
+++++++|++++|+.| +. .....|..+.+++.++|++.+
T Consensus 68 ~~~v~~~Pt~~~~~~G-~~-----~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 68 KYEVMSIPTLIVFKDG-QP-----VDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp HTTCCSBSEEEEEETT-EE-----EEEEESCCCHHHHHHHHHTTC
T ss_pred hCCCcccCEEEEEeCC-eE-----EEEEeCCCCHHHHHHHHHHhC
Confidence 9999999999999865 32 223356778999999998753
No 13
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.71 E-value=6e-17 Score=130.50 Aligned_cols=109 Identities=17% Similarity=0.197 Sum_probs=92.4
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (314)
.++|+++|+++|++.+.+. +..++|+|||+ ||++|+.+.|+++++++.+. +.+.|+.+|+++++++++
T Consensus 16 ~~~v~~l~~~~f~~~~~~~--~~~~lv~f~a~----wC~~C~~~~~~~~~~~~~~~------~~~~~~~vd~~~~~~l~~ 83 (130)
T 2dml_A 16 SDDVIELTPSNFNREVIQS--DGLWLVEFYAP----WCGHCQRLTPEWKKAATALK------DVVKVGAVNADKHQSLGG 83 (130)
T ss_dssp TSSSEECCTTTHHHHTTTC--SSCEEEEEECT----TCSTTGGGHHHHHHHHHHTT------TTSEEEEEETTTCHHHHH
T ss_pred CCCcEECCHHHHHHHHhcC--CCeEEEEEECC----CCHHHHhhCHHHHHHHHHhc------CceEEEEEeCCCCHHHHH
Confidence 4569999999999976533 45799999999 99999999999999999875 459999999999999999
Q ss_pred hCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 125 ~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
+++++++||+++|+++++. ...+ .|..+.+++.+|+.+.+.
T Consensus 84 ~~~v~~~Pt~~~~~~~~~~----~~~~-~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 84 QYGVQGFPTIKIFGANKNK----PEDY-QGGRTGEAIVDAALSALR 124 (130)
T ss_dssp HHTCCSSSEEEEESSCTTS----CEEC-CSCCSHHHHHHHHHHHHH
T ss_pred HcCCCccCEEEEEeCCCCe----EEEe-ecCCCHHHHHHHHHHHHh
Confidence 9999999999999987531 1122 467889999999988764
No 14
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.71 E-value=7.1e-17 Score=125.83 Aligned_cols=106 Identities=12% Similarity=0.204 Sum_probs=90.0
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
+.++++|+++|++.+. +..++|+||++ ||++|+.+.|+++++++.+.. ..+++.|+++|++++++++++
T Consensus 5 ~~v~~l~~~~~~~~~~----~~~~lv~f~~~----~C~~C~~~~~~~~~~~~~~~~---~~~~~~~~~vd~~~~~~l~~~ 73 (111)
T 3uvt_A 5 STVLALTENNFDDTIA----EGITFIKFYAP----WCGHCKTLAPTWEELSKKEFP---GLAGVKIAEVDCTAERNICSK 73 (111)
T ss_dssp CCSEECCTTTHHHHHH----SSEEEEEEECS----SCHHHHHHHHHHHHHHTCCCC---C-CCEEEEEEETTTCHHHHHH
T ss_pred CcceEcChhhHHHHhc----CCcEEEEEECC----CChhHHHhhHHHHHHHHHhhc---cCCceEEEEEeccccHhHHHh
Confidence 5699999999999985 34689999999 999999999999999988752 124699999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhh
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~ 168 (314)
++++++||+++|++| +. .....|..+.+++.+||+++
T Consensus 74 ~~v~~~Pt~~~~~~g-~~-----~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 74 YSVRGYPTLLLFRGG-KK-----VSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp TTCCSSSEEEEEETT-EE-----EEEECSCCSHHHHHHHHHHH
T ss_pred cCCCcccEEEEEeCC-cE-----EEeccCCcCHHHHHHHHHhc
Confidence 999999999999775 32 22335678999999999876
No 15
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.71 E-value=9.3e-17 Score=125.95 Aligned_cols=110 Identities=15% Similarity=0.279 Sum_probs=91.9
Q ss_pred hCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchH
Q psy8429 44 AKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (314)
Q Consensus 44 ~~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (314)
..++|+++|+++|++.+.+ ++..++++|+++ ||++|+.+.|.++++++.+. +++.|+.+|++++++++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~--~~~~~lv~f~~~----~C~~C~~~~~~l~~~~~~~~------~~v~~~~v~~~~~~~~~ 72 (115)
T 1thx_A 5 MSKGVITITDAEFESEVLK--AEQPVLVYFWAS----WCGPCQLMSPLINLAANTYS------DRLKVVKLEIDPNPTTV 72 (115)
T ss_dssp -CCSEEECCGGGHHHHTTT--CSSCEEEEEECT----TCTTHHHHHHHHHHHHHHTT------TTCEEEEEESTTCHHHH
T ss_pred ccCceEEeeccchhhHhhc--CCceEEEEEECC----CCHHHHHhHHHHHHHHHHhC------CcEEEEEEEcCCCHHHH
Confidence 3467999999999988642 356799999999 99999999999999999885 46999999999999999
Q ss_pred HhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCC
Q psy8429 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~ 171 (314)
++++++++|++++|+.| +. .....|..+.+++.+|+++.++.
T Consensus 73 ~~~~v~~~Pt~~~~~~G-~~-----~~~~~g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 73 KKYKVEGVPALRLVKGE-QI-----LDSTEGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp HHTTCCSSSEEEEEETT-EE-----EEEEESCCCHHHHHHHHHHHHC-
T ss_pred HHcCCCceeEEEEEcCC-EE-----EEEecCCCCHHHHHHHHHHHhcC
Confidence 99999999999999654 32 12224667899999999988763
No 16
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.70 E-value=8.6e-17 Score=130.62 Aligned_cols=107 Identities=10% Similarity=0.177 Sum_probs=90.8
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
++|+++|+++|++.+.+ ++..++|+|+|+ ||++|+++.|+++++++.+. +++.|+.+|++++++++++
T Consensus 22 ~~v~~l~~~~f~~~~~~--~~k~vlv~F~a~----wC~~C~~~~p~l~~l~~~~~------~~v~~~~vd~~~~~~l~~~ 89 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLK--ADGAILVDFWAE----WCGPAKMIAPILDEIADEYQ------GKLTVAKLNIDQNPGTAPK 89 (128)
T ss_dssp CCSEEECTTTHHHHTTT--CSSEEEEEEECS----SCHHHHHTHHHHHHHHHHTT------TTEEEEEEETTTCCTTSGG
T ss_pred cccEecChhhHHHHHHh--cCCEEEEEEECC----CCHHHHHHhHHHHHHHHHhc------CCeEEEEEECCCCHHHHHH
Confidence 56999999999987642 356799999999 99999999999999999885 4699999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
++++++|++++|+.| +. .....|..+.+++.+||++.++
T Consensus 90 ~~v~~~Pt~~~~~~G-~~-----~~~~~G~~~~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 90 YGIRGIPTLLLFKNG-EV-----AATKVGALSKGQLKEFLDANLA 128 (128)
T ss_dssp GTCCSSSEEEEEETT-EE-----EEEEESCCCHHHHHHHHHHHHC
T ss_pred cCCCccCEEEEEeCC-EE-----EEEEcCCCCHHHHHHHHHHhhC
Confidence 999999999999654 32 1223567789999999998753
No 17
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.70 E-value=1.2e-16 Score=124.02 Aligned_cols=106 Identities=18% Similarity=0.232 Sum_probs=91.3
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (314)
.+.++.+|+++|++.+.+ +..++|+|+++ ||++|+.+.|.++++++.+. +++.|+.+|+++++++++
T Consensus 3 ~~~v~~l~~~~~~~~~~~---~~~~lv~f~~~----~C~~C~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~ 69 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIRN---NKLVLVDCWAE----WCAPCHLYEPIYKKVAEKYK------GKAVFGRLNVDENQKIAD 69 (109)
T ss_dssp CCCCEECCTTTHHHHHHH---SSEEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTSEEEEEETTTCHHHHH
T ss_pred CCeEEEecHHHHHHHHhc---CCeEEEEEECC----CCHHHHhhhHHHHHHHHHhC------CCceEEEEccccCHHHHH
Confidence 467999999999999753 45689999999 99999999999999999885 469999999999999999
Q ss_pred hCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 125 ~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
+++++++|++++|++| +. .....|..+.+++.+++++.+
T Consensus 70 ~~~i~~~Pt~~~~~~g-~~-----~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 70 KYSVLNIPTTLIFVNG-QL-----VDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp HTTCCSSSEEEEEETT-EE-----EEEEESCCCHHHHHHHHHHHC
T ss_pred hcCcccCCEEEEEcCC-cE-----EEeeeccCCHHHHHHHHHHHh
Confidence 9999999999999665 32 222356779999999999875
No 18
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.70 E-value=1.6e-16 Score=129.80 Aligned_cols=112 Identities=17% Similarity=0.225 Sum_probs=94.4
Q ss_pred CCeEEeChhhHHHHHHcCC---------CCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC
Q psy8429 46 KAVLRFDGQKYKEYIKNGP---------RNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF 116 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~---------r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~ 116 (314)
..|+++|+++|++.+.+.+ ++..++|+|||+ ||++|+.+.|+++++++.+. +++.|+.+|+
T Consensus 9 ~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~----wC~~C~~~~~~l~~l~~~~~------~~v~~~~vd~ 78 (136)
T 2l5l_A 9 GKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYAD----WCGPCKMVAPILDELAKEYD------GQIVIYKVDT 78 (136)
T ss_dssp TSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECT----TSHHHHHHHHHHHHHHHHTT------TTCEEEEEET
T ss_pred CceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECC----cCHHHHHHHHHHHHHHHHhc------CCEEEEEEeC
Confidence 4599999999999875321 346799999999 99999999999999999885 4699999999
Q ss_pred CCCcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCcc
Q psy8429 117 DEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (314)
Q Consensus 117 ~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~i 173 (314)
+++++++++++++++|++++|.++|+. .. ..|..+.+++.+||++..+..-
T Consensus 79 ~~~~~l~~~~~v~~~Pt~~~~~~~G~~-----~~-~~G~~~~~~l~~~l~~~~~~~~ 129 (136)
T 2l5l_A 79 EKEQELAGAFGIRSIPSILFIPMEGKP-----EM-AQGAMPKASFKKAIDEFLLKKE 129 (136)
T ss_dssp TTCHHHHHHTTCCSSCEEEEECSSSCC-----EE-EESCCCHHHHHHHHHHHHTSCT
T ss_pred CCCHHHHHHcCCCCCCEEEEECCCCcE-----EE-EeCCCCHHHHHHHHHHHhhccC
Confidence 999999999999999999999554443 22 2577899999999999987553
No 19
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.70 E-value=1.5e-16 Score=123.58 Aligned_cols=105 Identities=17% Similarity=0.238 Sum_probs=89.4
Q ss_pred CeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhC
Q psy8429 47 AVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (314)
Q Consensus 47 ~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~ 126 (314)
+|+++|+++|++.+.+. +..++++|+++ ||++|+.+.|.++++++.+. +++.|+.+|+++++++++++
T Consensus 2 ~v~~l~~~~~~~~~~~~--~~~~lv~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~~~v~~~~~~~~~~~~ 69 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLES--SVPVLVDFWAP----WCGPCRIIAPVVDEIAGEYK------DKLKCVKLNTDESPNVASEY 69 (107)
T ss_dssp CCEEECHHHHHHHTTTC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTCEEEEEETTTCHHHHHHH
T ss_pred ccEeccHHHHHHHHhcC--CCcEEEEEECC----CCHhHHHHHHHHHHHHHHhC------CceEEEEEECCCCHHHHHHC
Confidence 47899999999987533 55799999999 99999999999999999885 46999999999999999999
Q ss_pred CcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 127 ~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
+++++|++++|+.| +. .....|..+.+++.+++++.+
T Consensus 70 ~v~~~Pt~~~~~~G-~~-----~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 70 GIRSIPTIMVFKGG-KK-----CETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp TCCSSCEEEEESSS-SE-----EEEEESCCCHHHHHHHHHHHC
T ss_pred CCCcCCEEEEEeCC-EE-----EEEEeCCCCHHHHHHHHHHHh
Confidence 99999999999764 32 222356778999999998875
No 20
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.70 E-value=8e-17 Score=128.36 Aligned_cols=110 Identities=19% Similarity=0.222 Sum_probs=90.8
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
+.|+++|+++|++.+.++ +..++|+|||+ ||++|+.+.|+++++++.+. +++.|+.+|++++++++++
T Consensus 3 ~~v~~l~~~~f~~~~~~~--~~~~lv~f~a~----~C~~C~~~~~~~~~~~~~~~------~~~~~~~vd~~~~~~~~~~ 70 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQG--KTHWVVDFYAP----WCGPCQNFAPEFELLARMIK------GKVRAGKVDCQAYPQTCQK 70 (122)
T ss_dssp CCSEECCHHHHHHHTTTC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHHT------TTCEEEEEETTTCHHHHHH
T ss_pred cchhcCCHHHHHHHHhcC--CCeEEEEEECC----CCHHHHHHHHHHHHHHHHhc------CCeEEEEEeCcCCHHHHHH
Confidence 568999999998766533 45789999999 99999999999999999885 4699999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccc-eeecccCHHHHHHHHHhhcC
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLD-IQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~-~~~~~~~a~~l~~fI~~~~~ 170 (314)
++++++||+++|++++... .+. ...++.+++++.+|+++.++
T Consensus 71 ~~v~~~Pt~~~~~~~~~~~---~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 71 AGIKAYPSVKLYQYERAKK---SIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp TTCCSSSEEEEEEEEGGGT---EEEEEEECCSCHHHHHHHHHHHHH
T ss_pred cCCCccceEEEEeCCCccc---eeeccccCcCCHHHHHHHHHHHHH
Confidence 9999999999998864321 111 00133799999999998875
No 21
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.70 E-value=1.3e-16 Score=134.09 Aligned_cols=107 Identities=16% Similarity=0.217 Sum_probs=91.5
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
..++++|+++|++.+ +. +..++|+|||+ ||++|+.+.|+|+++|+.+. +++.|+++|++++++++++
T Consensus 47 ~~~~~l~~~~f~~~~-~~--~~~vlv~F~a~----wC~~C~~~~p~l~~la~~~~------~~v~~~~vd~~~~~~l~~~ 113 (155)
T 2ppt_A 47 GKVAGIDPAILARAE-RD--DLPLLVDFWAP----WCGPCRQMAPQFQAAAATLA------GQVRLAKIDTQAHPAVAGR 113 (155)
T ss_dssp SSEEECCHHHHHHHT-TC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHHT------TTCEEEEEETTTSTHHHHH
T ss_pred CCCccCCHHHHHHHH-hC--CCcEEEEEECC----CCHHHHHHHHHHHHHHHHcc------CCEEEEEEeCCccHHHHHH
Confidence 458999999999987 23 45799999999 99999999999999999986 4699999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCC
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~ 171 (314)
|+|+++||+++|+.| +. .+...|..+.+++.+||++.++.
T Consensus 114 ~~i~~~Pt~~~~~~G-~~-----~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 114 HRIQGIPAFILFHKG-RE-----LARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp TTCCSSSEEEEEETT-EE-----EEEEESCCCHHHHHHHHHHHHC-
T ss_pred cCCCcCCEEEEEeCC-eE-----EEEecCCCCHHHHHHHHHHHhcc
Confidence 999999999999764 32 22335677899999999998763
No 22
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=1.1e-16 Score=129.00 Aligned_cols=114 Identities=15% Similarity=0.141 Sum_probs=94.3
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (314)
.++|+++|+++|++.+.+. +..++|+|||+ ||++|+.+.|+++++++.+... ..+++.|+.+|+++++++++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~--~~~~lv~f~a~----wC~~C~~~~~~~~~~~~~~~~~--~~~~~~~~~vd~~~~~~l~~ 77 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDS--EDVWMVEFYAP----WCGHCKNLEPEWAAAASEVKEQ--TKGKVKLAAVDATVNQVLAS 77 (133)
T ss_dssp CCSCEECCTTHHHHHTTTS--SSEEEEEEECT----TCHHHHTHHHHHHHHHHHHHHH--TTTSEEEEEEETTTCCHHHH
T ss_pred CCcCEEcCHhhHHHHHhcC--CCeEEEEEECC----CCHHHHhhcHHHHHHHHHHHhh--cCCcEEEEEEECCCCHHHHH
Confidence 4569999999999987433 45799999999 9999999999999999988521 11359999999999999999
Q ss_pred hCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 125 ~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
+++++++||+++|++| +. .....|..+.+++.+|+++.++.+
T Consensus 78 ~~~v~~~Pt~~~~~~g-~~-----~~~~~G~~~~~~l~~~l~~~~~~~ 119 (133)
T 1x5d_A 78 RYGIRGFPTIKIFQKG-ES-----PVDYDGGRTRSDIVSRALDLFSDN 119 (133)
T ss_dssp HHTCCSSSEEEEEETT-EE-----EEEECSCCSHHHHHHHHHHHHHHH
T ss_pred hCCCCeeCeEEEEeCC-Cc-----eEEecCCCCHHHHHHHHHHHhhcc
Confidence 9999999999999985 32 122246778999999999987644
No 23
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=1.1e-16 Score=128.51 Aligned_cols=108 Identities=17% Similarity=0.212 Sum_probs=91.8
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (314)
.+.|+++|+++|++.+ ++ .++|+|+|+ ||++|+.+.|+++++++.+.. .++.|+.+|+++++++++
T Consensus 6 ~~~v~~l~~~~f~~~~-~~----~vlv~f~a~----wC~~C~~~~p~~~~~~~~~~~-----~~v~~~~vd~~~~~~~~~ 71 (126)
T 1x5e_A 6 SGNVRVITDENWRELL-EG----DWMIEFYAP----WCPACQNLQPEWESFAEWGED-----LEVNIAKVDVTEQPGLSG 71 (126)
T ss_dssp CCSEEECCTTTHHHHT-SS----EEEEEEECS----SCHHHHHHHHHHHHHHHHHGG-----GTCEEEEEETTTCHHHHH
T ss_pred CCccEEecHHHHHHHh-CC----CEEEEEECC----CCHHHHHHhHHHHHHHHHhcc-----CCeEEEEEECcCCHHHHH
Confidence 4569999999999875 33 289999999 999999999999999998752 369999999999999999
Q ss_pred hCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCcc
Q psy8429 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (314)
Q Consensus 125 ~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~i 173 (314)
+++++++||+++|+.| +. ....|..+.+++.+||++.++..+
T Consensus 72 ~~~v~~~Pt~~~~~~G-~~------~~~~G~~~~~~l~~~l~~~~~~~~ 113 (126)
T 1x5e_A 72 RFIINALPTIYHCKDG-EF------RRYQGPRTKKDFINFISDKEWKSI 113 (126)
T ss_dssp HTTCCSSSEEEEEETT-EE------EECCSCCCHHHHHHHHHTCGGGGS
T ss_pred HcCCcccCEEEEEeCC-eE------EEeecCCCHHHHHHHHHHHhhccC
Confidence 9999999999999654 32 122467889999999999987665
No 24
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.69 E-value=1.8e-16 Score=124.87 Aligned_cols=115 Identities=23% Similarity=0.337 Sum_probs=94.2
Q ss_pred hCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchH
Q psy8429 44 AKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (314)
Q Consensus 44 ~~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (314)
.+++|+++|+++|++.+. + +..++|+|+++ ||++|+++.|+++++++.+... ..++.|+++|++++++++
T Consensus 5 ~~~~v~~l~~~~~~~~~~-~--~~~~lv~f~~~----~C~~C~~~~~~~~~~~~~~~~~---~~~v~~~~vd~~~~~~~~ 74 (120)
T 1mek_A 5 EEDHVLVLRKSNFAEALA-A--HKYLLVEFYAP----WCGHCKALAPEYAKAAGKLKAE---GSEIRLAKVDATEESDLA 74 (120)
T ss_dssp EETTEEECCTTTHHHHHH-H--CSEEEEEEECS----SCSTTSTTHHHHHHHHHTTTTT---CCCCBCEEEETTTCCSSH
T ss_pred CCCCcEEechhhHHHHHc-c--CCeEEEEEECC----CCHHHHHhhHHHHHHHHHHhcc---CCcEEEEEEcCCCCHHHH
Confidence 346799999999999875 2 34689999999 9999999999999999987531 246999999999999999
Q ss_pred HhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
++++++++|++++|++| +.... ....|..+.+++.+|+++.++..
T Consensus 75 ~~~~v~~~Pt~~~~~~g-~~~~~---~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 75 QQYGVRGYPTIKFFRNG-DTASP---KEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp HHHTCCSSSEEEEEESS-CSSSC---EECCCCSSHHHHHHHHHTTSCCC
T ss_pred HHCCCCcccEEEEEeCC-CcCCc---ccccCccCHHHHHHHHHhccCCC
Confidence 99999999999999775 32101 12246788999999999988743
No 25
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.68 E-value=2.2e-16 Score=123.79 Aligned_cols=107 Identities=13% Similarity=0.201 Sum_probs=90.2
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
+.|+++|+++|++.+.++ +..++|+|+++ ||++|+++.|.++++++.+. +++.|+.+|++++++++++
T Consensus 5 ~~v~~l~~~~~~~~~~~~--~~~~vv~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~~~v~~~~~~~~~~~ 72 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKN--DKPVLVDFWAA----WCGPCRQIAPSLEAIAAEYG------DKIEIVKLNIDENPGTAAK 72 (112)
T ss_dssp CCCEEECTTTHHHHTTTC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTCEEEEEETTTCHHHHHH
T ss_pred ceEEecchhhHHHHHhhC--CCeEEEEEECC----CCHhHHhcCHHHHHHHHHhc------CCeEEEEEEcCCCHHHHHh
Confidence 458999999999877533 55789999999 99999999999999999885 4699999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
++++++||+++|+.| +. .....|..+.+++.+++++.+.
T Consensus 73 ~~v~~~Pt~~~~~~G-~~-----~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 73 YGVMSIPTLNVYQGG-EV-----AKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp TTCCSSSEEEEEETT-EE-----EEEEESCCCHHHHHHHTHHHHC
T ss_pred CCCCcccEEEEEeCC-EE-----EEEEeCCCCHHHHHHHHHHHhh
Confidence 999999999999765 32 1222567789999999988753
No 26
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.68 E-value=5.2e-17 Score=131.39 Aligned_cols=116 Identities=14% Similarity=0.238 Sum_probs=95.4
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (314)
.+.|+++|+++|++.+.+ ++..++|+|||+ ||++|+++.|+++++++.+.. .+++.|+.+|+++++.+++
T Consensus 6 ~~~v~~l~~~~~~~~~~~--~~~~vlv~f~a~----wC~~C~~~~p~~~~~~~~~~~----~~~~~~~~vd~~~~~~~~~ 75 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMD--PKKDVLIEFYAP----WCGHCKQLEPIYTSLGKKYKG----QKDLVIAKMDATANDITND 75 (133)
T ss_dssp SCSSEECCTTTCCCCCTC--TTSEEEEEECCT----TCSHHHHHHHHHHHHHHHHTT----SSSEEEEEECTTTSCCCCS
T ss_pred CCceEEEcCCCHHHHhcc--CCCcEEEEEECC----CChhHHHHHHHHHHHHHHhcC----CCCEEEEEecCCcCHHHHh
Confidence 456999999999998742 356799999999 999999999999999998852 1369999999999999999
Q ss_pred hCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCcc
Q psy8429 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (314)
Q Consensus 125 ~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~i 173 (314)
+|+++++||+++|+++++.. ...+..+..+.+++.+||+++++...
T Consensus 76 ~~~v~~~Pt~~~~~~g~~~~---~~~~~gg~~~~~~l~~~l~~~~~~~~ 121 (133)
T 2dj3_A 76 QYKVEGFPTIYFAPSGDKKN---PIKFEGGNRDLEHLSKFIDEHATKRS 121 (133)
T ss_dssp SCCCSSSSEEEEECTTCTTS---CEECCSSCCSTTHHHHHHHHHSSSCS
T ss_pred hcCCCcCCEEEEEeCCCccc---ceEecCCCcCHHHHHHHHHHhccccc
Confidence 99999999999999874321 12221234789999999999988654
No 27
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.68 E-value=2.2e-16 Score=122.14 Aligned_cols=103 Identities=17% Similarity=0.255 Sum_probs=86.8
Q ss_pred eEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCC
Q psy8429 48 VLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR 127 (314)
Q Consensus 48 VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~ 127 (314)
|+++|+++|++.+ ++ +..++++|+++ ||++|+.+.|+++++++.+. +++.|+.+|++++++++++++
T Consensus 2 v~~l~~~~~~~~~-~~--~~~~~v~f~~~----~C~~C~~~~~~l~~~~~~~~------~~v~~~~v~~~~~~~~~~~~~ 68 (105)
T 1nsw_A 2 TMTLTDANFQQAI-QG--DGPVLVDFWAA----WCGPCRMMAPVLEEFAEAHA------DKVTVAKLNVDENPETTSQFG 68 (105)
T ss_dssp CEEECTTTHHHHH-SS--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHST------TTCEEEEEETTTCHHHHHHTT
T ss_pred ceeccHHhHHHHH-hC--CCcEEEEEECC----CCHHHHHHHHHHHHHHHHhc------CCcEEEEEECcCCHHHHHHcC
Confidence 7899999999765 33 34689999999 99999999999999999875 459999999999999999999
Q ss_pred cccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 128 LNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 128 v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
++++|++++|+.| +. .....|..+.+++.+++++.+
T Consensus 69 v~~~Pt~~~~~~G-~~-----~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 69 IMSIPTLILFKGG-RP-----VKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp CCSSSEEEEEETT-EE-----EEEEESCCCHHHHHHHTTTTT
T ss_pred CccccEEEEEeCC-eE-----EEEEecCCCHHHHHHHHHHHh
Confidence 9999999999654 32 122246778899999998765
No 28
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.68 E-value=3.4e-16 Score=121.18 Aligned_cols=106 Identities=17% Similarity=0.236 Sum_probs=88.9
Q ss_pred CeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhC
Q psy8429 47 AVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (314)
Q Consensus 47 ~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~ 126 (314)
.|+++|+++|++.+. . +..++++|+++ ||++|+.+.|.++++++.+. +++.|+.+|+++++++++++
T Consensus 2 ~v~~l~~~~~~~~~~-~--~~~~lv~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~~~v~~~~~~~~~~~~ 68 (109)
T 2yzu_A 2 KPIEVTDQNFDETLG-Q--HPLVLVDFWAE----WCAPCRMIAPILEEIAKEYE------GKLLVAKLDVDENPKTAMRY 68 (109)
T ss_dssp CCEECCTTTHHHHHH-H--CSEEEEEEECT----TCHHHHHHHHHHHHHHHHTB------TTBEEEEEETTTCHHHHHHT
T ss_pred cceEccHhHHHHHhc-C--CCeEEEEEECC----CCHHHHHhhHHHHHHHHHhh------CceEEEEEECCCCHhHHHhC
Confidence 588999999997764 3 34689999999 99999999999999999885 46999999999999999999
Q ss_pred CcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCC
Q psy8429 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (314)
Q Consensus 127 ~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~ 171 (314)
+++++|++++|+.| +. .....|..+.+++.+|+++.++.
T Consensus 69 ~v~~~Pt~~~~~~g-~~-----~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 69 RVMSIPTVILFKDG-QP-----VEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp TCCSSSEEEEEETT-EE-----EEEEESCCCHHHHHHHHHTTC--
T ss_pred CCCcCCEEEEEeCC-cE-----eeeEeCCCCHHHHHHHHHHHhhh
Confidence 99999999999654 32 12224667899999999998764
No 29
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.68 E-value=1.7e-16 Score=125.92 Aligned_cols=109 Identities=16% Similarity=0.239 Sum_probs=90.8
Q ss_pred hCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchH
Q psy8429 44 AKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (314)
Q Consensus 44 ~~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (314)
.+++++++|+++|++.+.+. +..++|+|+++ ||++|+.+.|.++++++.+. +++.|+.+|++++++++
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~--~~~~lv~f~~~----~C~~C~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~ 77 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSS--NKPVLVDFWAT----WCGPCKMVAPVLEEIATERA------TDLTVAKLDVDTNPETA 77 (121)
T ss_dssp --CCSEECCTTTHHHHTTTC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTCEEEEEETTTCHHHH
T ss_pred hcccceecCHHHHHHHHHhC--CCcEEEEEECC----CCHHHHHHHHHHHHHHHHhc------CCeEEEEEECCCCHHHH
Confidence 35679999999999876533 45689999999 99999999999999999875 46999999999999999
Q ss_pred HhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
++++++++|++++|+.| +. .....|..+.+++.+||++.++
T Consensus 78 ~~~~i~~~Pt~~~~~~g-~~-----~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 78 RNFQVVSIPTLILFKDG-QP-----VKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp HHTTCCSSSEEEEEETT-EE-----EEEEESCCCHHHHHHHTCSCCC
T ss_pred HhcCCCcCCEEEEEECC-EE-----EEEecCCCCHHHHHHHHHHHHh
Confidence 99999999999999864 32 1223567789999999987654
No 30
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.68 E-value=3.2e-16 Score=120.86 Aligned_cols=103 Identities=15% Similarity=0.231 Sum_probs=87.8
Q ss_pred eEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCC
Q psy8429 48 VLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR 127 (314)
Q Consensus 48 VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~ 127 (314)
|.++|+++|++.+.++ +.+++++|+++ ||++|+.+.|.++++++.+. +++.|+.+|++++++++++++
T Consensus 2 v~~~~~~~~~~~~~~~--~~~~~v~f~~~----~C~~C~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~~~ 69 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLES--EVPVMVDFWAP----WCGPCKLIAPVIDELAKEYS------GKIAVYKLNTDEAPGIATQYN 69 (105)
T ss_dssp CEECCTTTHHHHTTTC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTCEEEEEETTTCHHHHHHTT
T ss_pred ceechhhhHHHHHhcC--CCcEEEEEECC----CChHHHHHHHHHHHHHHHhc------CceEEEEEcCcchHHHHHhCC
Confidence 6789999999987533 55789999999 99999999999999999875 459999999999999999999
Q ss_pred cccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhh
Q psy8429 128 LNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 128 v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~ 168 (314)
++++|++++|+.| +. .....|..+.+++.++|++.
T Consensus 70 v~~~Pt~~~~~~g-~~-----~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 70 IRSIPTVLFFKNG-ER-----KESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp CCSSSEEEEEETT-EE-----EEEEEECCCHHHHHHHHHHH
T ss_pred CCcccEEEEEeCC-eE-----EEEEecCCCHHHHHHHHHhh
Confidence 9999999999765 32 22235677899999999875
No 31
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.68 E-value=1.8e-16 Score=130.29 Aligned_cols=109 Identities=13% Similarity=0.245 Sum_probs=92.8
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (314)
.+.|+++|+++|++.+.+. +..++|+|||+ ||++|+.+.|.++++++.+. +++.|+.+|+++++++++
T Consensus 5 ~~~v~~l~~~~f~~~~~~~--~~~vlv~F~a~----wC~~C~~~~~~l~~l~~~~~------~~v~~~~vd~~~~~~l~~ 72 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDS--KKPVVVMFYSP----ACPYCKAMEPYFEEYAKEYG------SSAVFGRINIATNPWTAE 72 (140)
T ss_dssp TTTEEEECHHHHHHHTTTC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHHT------TTSEEEEEETTTCHHHHH
T ss_pred CcceEEcchHhHHHHHHhC--CCcEEEEEECC----CChhHHHHHHHHHHHHHHhC------CceEEEEEECCcCHhHHH
Confidence 4569999999999766533 55799999999 99999999999999999986 469999999999999999
Q ss_pred hCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCC
Q psy8429 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (314)
Q Consensus 125 ~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~ 171 (314)
+++|+++||+++|+.| +. .....|..+.+++.+||++.++.
T Consensus 73 ~~~v~~~Pt~~~~~~G-~~-----~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 73 KYGVQGTPTFKFFCHG-RP-----VWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp HHTCCEESEEEEEETT-EE-----EEEEESSCCHHHHHHHHHHHHHH
T ss_pred HCCCCcCCEEEEEeCC-cE-----EEEEcCCCCHHHHHHHHHHHhcc
Confidence 9999999999999765 32 22335677899999999988763
No 32
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.68 E-value=2.3e-16 Score=125.86 Aligned_cols=107 Identities=14% Similarity=0.206 Sum_probs=90.5
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
+.++.+|+++|++.+.+. +..++|+|+++ ||++|+.+.|.++++++.+. +++.|+.+|++++++++++
T Consensus 13 ~~~~~~~~~~f~~~v~~~--~k~vlv~f~a~----~C~~C~~~~~~l~~~~~~~~------~~v~~~~vd~d~~~~l~~~ 80 (119)
T 1w4v_A 13 TTFNIQDGPDFQDRVVNS--ETPVVVDFHAQ----WCGPCKILGPRLEKMVAKQH------GKVVMAKVDIDDHTDLAIE 80 (119)
T ss_dssp SEEECCSHHHHHHHTTTC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TSSEEEEEETTTTHHHHHH
T ss_pred eEEEecChhhHHHHHHcC--CCcEEEEEECC----CCHHHHHHHHHHHHHHHHhc------CCeEEEEEeCCCCHHHHHH
Confidence 458999999999987533 45699999999 99999999999999999875 4699999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
++++++|++++|+.| +. .....|..+.+++.+||++.+|
T Consensus 81 ~~v~~~Pt~~~~~~G-~~-----~~~~~G~~~~~~l~~~l~~~l~ 119 (119)
T 1w4v_A 81 YEVSAVPTVLAMKNG-DV-----VDKFVGIKDEDQLEAFLKKLIG 119 (119)
T ss_dssp TTCCSSSEEEEEETT-EE-----EEEEESCCCHHHHHHHHHHHHC
T ss_pred cCCCcccEEEEEeCC-cE-----EEEEcCCCCHHHHHHHHHHHhC
Confidence 999999999999654 32 1222466789999999998764
No 33
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.68 E-value=3.3e-16 Score=122.87 Aligned_cols=107 Identities=14% Similarity=0.297 Sum_probs=85.4
Q ss_pred CeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 47 AVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 47 ~VI~Lt~-~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
+|+++++ ++|++.+.+..++..++|+|+|+ ||++|+.+.|.++++++.+.. +++.|+++|++++++++++
T Consensus 1 ~v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~----wC~~C~~~~~~~~~~~~~~~~-----~~~~~~~vd~~~~~~~~~~ 71 (112)
T 3d6i_A 1 PVIEINDQEQFTYLTTTAAGDKLIVLYFHTS----WAEPCKALKQVFEAISNEPSN-----SNVSFLSIDADENSEISEL 71 (112)
T ss_dssp CEEEECCHHHHHHHHTTTTTTCCEEEEEECC----C--CHHHHHHHHHHHHHCGGG-----TTSEEEEEETTTCHHHHHH
T ss_pred CccccCCHHHHHHHHhcccCCCEEEEEEECC----CCHHHHHHHHHHHHHHHhcCC-----CCEEEEEEecccCHHHHHH
Confidence 4789998 99999875324466799999999 999999999999999998642 3599999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
++++++||+++|+.| +. ... ..|.+.+++.++|++.+
T Consensus 72 ~~v~~~Pt~~~~~~G-~~-----~~~-~~G~~~~~l~~~l~~~~ 108 (112)
T 3d6i_A 72 FEISAVPYFIIIHKG-TI-----LKE-LSGADPKEYVSLLEDCK 108 (112)
T ss_dssp TTCCSSSEEEEEETT-EE-----EEE-ECSCCHHHHHHHHHHHH
T ss_pred cCCCcccEEEEEECC-EE-----EEE-ecCCCHHHHHHHHHHHH
Confidence 999999999999764 32 122 23446667999998765
No 34
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.67 E-value=1.4e-16 Score=126.64 Aligned_cols=114 Identities=18% Similarity=0.298 Sum_probs=90.5
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (314)
+++|.++|+++|++.+. .++..++|+|||+ ||++|+++.|+++++++.+... +..+++.|+++|+++++ +.+
T Consensus 6 ~~~v~~l~~~~f~~~v~--~~~~~vlv~f~a~----wC~~C~~~~p~~~~~~~~~~~~-~~~~~v~~~~vd~~~~~-~~~ 77 (121)
T 2djj_A 6 EGPVTVVVAKNYNEIVL--DDTKDVLIEFYAP----WCGHCKALAPKYEELGALYAKS-EFKDRVVIAKVDATAND-VPD 77 (121)
T ss_dssp SCSSEECCTTTTTTSSS--CTTSCEEEEEECS----SCTTHHHHHHHHHHHHHHHTTS-SCTTSSEEEEEETTTSC-CSS
T ss_pred CCCeEEecccCHHHHhh--cCCCCEEEEEECC----CCHhHHHhhHHHHHHHHHHhhc-ccCCceEEEEEECcccc-ccc
Confidence 46799999999999863 2356799999999 9999999999999999998621 11236999999999987 444
Q ss_pred hCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 125 ~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
+++++||+++|+++++.. .. . ..|..+.+++.+||+++++..
T Consensus 78 --~v~~~Pt~~~~~~~~~~~-~~--~-~~G~~~~~~l~~~i~~~~~~~ 119 (121)
T 2djj_A 78 --EIQGFPTIKLYPAGAKGQ-PV--T-YSGSRTVEDLIKFIAENGKYK 119 (121)
T ss_dssp --CCSSSSEEEEECSSCTTS-CC--C-CCCCSCHHHHHHHHHHTSSSC
T ss_pred --ccCcCCeEEEEeCcCCCC-ce--E-ecCCCCHHHHHHHHHhccCcC
Confidence 999999999999875421 11 1 246788999999999988654
No 35
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.67 E-value=5.3e-16 Score=120.86 Aligned_cols=105 Identities=18% Similarity=0.328 Sum_probs=85.8
Q ss_pred CeEEe-ChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 47 AVLRF-DGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 47 ~VI~L-t~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
+++++ |+++|++.+.+ .++..++++|||+ ||++|+.+.|.++++++.+. ++.|+++|++++++++++
T Consensus 2 ~v~~i~~~~~~~~~~~~-~~~~~v~v~f~a~----wC~~C~~~~~~~~~~~~~~~-------~~~~~~vd~~~~~~~~~~ 69 (107)
T 1gh2_A 2 GVKPVGSDPDFQPELSG-AGSRLAVVKFTMR----GCGPCLRIAPAFSSMSNKYP-------QAVFLEVDVHQCQGTAAT 69 (107)
T ss_dssp CEEEECSGGGHHHHHHH-TTTSCEEEEEECS----SCHHHHHHHHHHHHHHHHCT-------TSEEEEEETTTSHHHHHH
T ss_pred ceEEecCHHHHHHHHHh-CCCCEEEEEEECC----CChhhHHHHHHHHHHHHHCC-------CcEEEEEECccCHHHHHh
Confidence 46777 55899998853 2355799999999 99999999999999999872 599999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
++++++||+++|+.| +. .+.. .|.+.+++.+||++.+|
T Consensus 70 ~~v~~~Pt~~~~~~G-~~-----~~~~-~G~~~~~l~~~l~~~lg 107 (107)
T 1gh2_A 70 NNISATPTFQFFRNK-VR-----IDQY-QGADAVGLEEKIKQHLE 107 (107)
T ss_dssp TTCCSSSEEEEEETT-EE-----EEEE-ESSCHHHHHHHHHHHHC
T ss_pred cCCCcccEEEEEECC-eE-----EEEE-eCCCHHHHHHHHHHhcC
Confidence 999999999999765 32 1222 34566779999998765
No 36
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.67 E-value=5.4e-16 Score=121.63 Aligned_cols=106 Identities=12% Similarity=0.232 Sum_probs=87.7
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC-CCcchH
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-EGSDVF 123 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~-~~~~lf 123 (314)
.+.|+++|+++|++.+. ..++..++|+|||+ ||++|+.+.|.++++++.+. ++.|+.+|++ ++++++
T Consensus 4 ~~~v~~l~~~~~~~~~~-~~~~~~vlv~f~a~----wC~~C~~~~~~l~~~~~~~~-------~v~~~~vd~~~~~~~~~ 71 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVK-AAGDKPVVLDMFTQ----WCGPSKAMAPKYEKLAEEYL-------DVIFLKLDCNQENKTLA 71 (111)
T ss_dssp TTSEEEECTTTHHHHHT-TCTTSCEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TSEEEEEECSSTTHHHH
T ss_pred cCccEEechHHHHHHHH-hcCCCEEEEEEECC----cCHhHHHHCHHHHHHHHHCC-------CeEEEEEecCcchHHHH
Confidence 45699999999999874 33456799999999 99999999999999999874 4999999999 689999
Q ss_pred HhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
++++++++||+++++.| +. ..... |.+.+++.++|++..
T Consensus 72 ~~~~v~~~Pt~~~~~~G-~~-----~~~~~-G~~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 72 KELGIRVVPTFKILKEN-SV-----VGEVT-GAKYDKLLEAIQAAR 110 (111)
T ss_dssp HHHCCSBSSEEEEESSS-SE-----EEEEE-SSCHHHHHHHHHHHH
T ss_pred HHcCCCeeeEEEEEeCC-cE-----EEEEc-CCCHHHHHHHHHHhh
Confidence 99999999999988765 32 12223 346899999998764
No 37
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.67 E-value=4e-16 Score=142.64 Aligned_cols=108 Identities=12% Similarity=0.214 Sum_probs=93.3
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (314)
.+.|+++|+++|++.+ +.+++..++|+|||+ ||++|+.+.|.++++++.+. +++.|+++|+++++++++
T Consensus 6 ~~~v~~~~~~~f~~~~-~~~~~~~v~v~f~a~----wC~~C~~~~p~~~~~~~~~~------~~~~~~~vd~~~~~~~~~ 74 (287)
T 3qou_A 6 VENIVNINESNLQQVL-EQSMTTPVLFYFWSE----RSQHCLQLTPILESLAAQYN------GQFILAKLDCDAEQMIAA 74 (287)
T ss_dssp CTTEEECCTTTHHHHH-TTTTTSCEEEEEECT----TCTTTTTTHHHHHHHHHHHT------SSSEEEEEETTTCHHHHH
T ss_pred CCccEECCHHHHHHHH-HhcCCCeEEEEEECC----CChHHHHHHHHHHHHHHHcC------CCeEEEEEeCccCHHHHH
Confidence 3569999999999976 444567899999999 99999999999999999986 469999999999999999
Q ss_pred hCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 125 ~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
+|+|+++||+++|+.| +. .....|..+.+.+.+|+.+.+
T Consensus 75 ~~~v~~~Pt~~~~~~G-~~-----~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 75 QFGLRAIPTVYLFQNG-QP-----VDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp TTTCCSSSEEEEEETT-EE-----EEEEESCCCHHHHHHHHHHHS
T ss_pred HcCCCCCCeEEEEECC-EE-----EEEeeCCCCHHHHHHHHHHHc
Confidence 9999999999999765 32 222357788999999999886
No 38
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.67 E-value=1.8e-16 Score=127.99 Aligned_cols=107 Identities=11% Similarity=0.211 Sum_probs=85.8
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCc--------------cchhhHHHHHHHHHHhccccCCCCcEEE
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCH--------------ICVSASDEYTIVANSFRYSQMYSNKLFF 111 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~--------------~C~~~~pefe~vA~s~~~~~~~~~~v~F 111 (314)
++|+++|+++|++.+.+ ++..++|+|||+ ||+ +|+.+.|.++++++.+. +++.|
T Consensus 3 ~~v~~l~~~~f~~~~~~--~~k~vlv~F~a~----wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~------~~~~~ 70 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLK--ADGAILVDFWAE----WCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQ------GKLTV 70 (123)
T ss_dssp CSCEECCSTTHHHHTTS--CSSEEEEEEECS----SCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------------CEE
T ss_pred CccEecChhhHHHHHHh--CCCeEEEEEECC----CCccccccccccccCCCCcHHHHHHHHHHHHHhc------CCeEE
Confidence 56999999999987643 356799999999 999 99999999999998875 46999
Q ss_pred EEEECCCCcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 112 ILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 112 ~~vD~~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
+++|++++++++++++++++|++++|+.| +. .....|..+.+++.+||++.++
T Consensus 71 ~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G-~~-----~~~~~G~~~~~~l~~~l~~~l~ 123 (123)
T 1oaz_A 71 AKLNIDQNPGTAPKYGIRGIPTLLLFKNG-EV-----AATKVGALSKGQLKEFLDANLA 123 (123)
T ss_dssp EEEETTSCTTTGGGGTCCBSSEEEEEESS-SE-----EEEEESCCCHHHHHHHHTTTCC
T ss_pred EEEECCCCHHHHHHcCCCccCEEEEEECC-EE-----EEEEeCCCCHHHHHHHHHHHhC
Confidence 99999999999999999999999999654 32 2223567789999999988764
No 39
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.66 E-value=3.7e-16 Score=127.43 Aligned_cols=113 Identities=13% Similarity=0.239 Sum_probs=94.8
Q ss_pred hCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchH
Q psy8429 44 AKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (314)
Q Consensus 44 ~~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (314)
..+.|+++|+++|++.+. . +..++|+||++ ||++|+.+.|+++++++.+... ..++.|+++|++++++++
T Consensus 15 ~~~~v~~l~~~~~~~~~~-~--~~~vlv~f~a~----wC~~C~~~~p~~~~~~~~~~~~---~~~v~~~~vd~~~~~~~~ 84 (140)
T 2dj1_A 15 EENGVWVLNDGNFDNFVA-D--KDTVLLEFYAP----WCGHCKQFAPEYEKIASTLKDN---DPPIAVAKIDATSASMLA 84 (140)
T ss_dssp EETTEEECCTTTHHHHHT-T--CSEEEEEECCT----TCHHHHTTHHHHHHHHHHHHSS---SSCCEEEEECTTTCHHHH
T ss_pred CCCCCEEcChHhHHHHHh-c--CCeEEEEEECC----CCHHHHHhhHHHHHHHHHHhcc---CCceEEEEEeCcccHHHH
Confidence 346799999999999874 3 45689999999 9999999999999999988631 124999999999999999
Q ss_pred HhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCcc
Q psy8429 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~i 173 (314)
++|+++++|++++|+.| +. ..+ .|..+.++|.+||++.++...
T Consensus 85 ~~~~v~~~Pt~~~~~~G-~~-----~~~-~g~~~~~~l~~~l~~~~~~~~ 127 (140)
T 2dj1_A 85 SKFDVSGYPTIKILKKG-QA-----VDY-DGSRTQEEIVAKVREVSQPDW 127 (140)
T ss_dssp HHTTCCSSSEEEEEETT-EE-----EEC-CSCCCHHHHHHHHHHHHSSSC
T ss_pred HHCCCCccCeEEEEECC-cE-----EEc-CCCCCHHHHHHHHHHhcCCCC
Confidence 99999999999999764 32 122 467899999999999988664
No 40
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.66 E-value=2.4e-16 Score=125.40 Aligned_cols=105 Identities=15% Similarity=0.213 Sum_probs=87.2
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
......|+++|++.+.+ .++..++|+|||+ ||++|+.+.|+++++++.+. ++.|+++|++++++++++
T Consensus 12 ~~~~~~t~~~f~~~l~~-~~~k~vlv~F~a~----wC~~C~~~~p~l~~l~~~~~-------~v~~~~vd~d~~~~l~~~ 79 (116)
T 3qfa_C 12 SVKQIESKTAFQEALDA-AGDKLVVVDFSAT----WCGPSKMIKPFFHSLSEKYS-------NVIFLEVDVDDCQDVASE 79 (116)
T ss_dssp CCBCCCCHHHHHHHHHH-HTTSCEEEEEECT----TCHHHHHHHHHHHHHHTTCT-------TSEEEEEETTTTHHHHHH
T ss_pred cccCCCCHHHHHHHHHh-cCCCEEEEEEECC----CCHHHHHHHHHHHHHHHHCC-------CCEEEEEECCCCHHHHHH
Confidence 34667789999998752 2356799999999 99999999999999998874 399999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
|+++++||+++|++| +. .....|. +.+++.++|++.+
T Consensus 80 ~~v~~~Pt~~~~~~G-~~-----~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 80 CEVKSMPTFQFFKKG-QK-----VGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp TTCCSSSEEEEESSS-SE-----EEEEESC-CHHHHHHHHHHHC
T ss_pred cCCccccEEEEEeCC-eE-----EEEEcCC-CHHHHHHHHHHhC
Confidence 999999999999765 32 2222455 9999999998763
No 41
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.66 E-value=4e-16 Score=128.99 Aligned_cols=108 Identities=15% Similarity=0.284 Sum_probs=92.8
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (314)
...++++++++|++.+ .. +..++|+|||+ ||++|+++.|+++++++.+. +++.|+.+|+++++++.+
T Consensus 37 ~~~v~~l~~~~~~~~~-~~--~k~vlv~F~a~----wC~~C~~~~p~l~~~~~~~~------~~~~~~~vd~~~~~~l~~ 103 (148)
T 3p2a_A 37 DGEVINATAETLDKLL-QD--DLPMVIDFWAP----WCGPCRSFAPIFAETAAERA------GKVRFVKVNTEAEPALST 103 (148)
T ss_dssp CCCCEECCTTTHHHHT-TC--SSCEEEEEECS----SCHHHHHHHHHHHHHHHHTT------TTCEEEEEETTTCHHHHH
T ss_pred cCCceecCHHHHHHHH-hc--CCcEEEEEECC----CCHHHHHHHHHHHHHHHHcC------CceEEEEEECcCCHHHHH
Confidence 3469999999999987 23 55799999999 99999999999999999985 469999999999999999
Q ss_pred hCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCC
Q psy8429 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (314)
Q Consensus 125 ~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~ 171 (314)
+|+|+++|++++|+.| +. .....|..+.+++.+||++.++.
T Consensus 104 ~~~v~~~Pt~~~~~~G-~~-----~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 104 RFRIRSIPTIMLYRNG-KM-----IDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp HTTCCSSSEEEEEETT-EE-----EEEESSCCCHHHHHHHHHHHHHS
T ss_pred HCCCCccCEEEEEECC-eE-----EEEEeCCCCHHHHHHHHHHHhcc
Confidence 9999999999999765 32 22335678999999999998764
No 42
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.66 E-value=3.5e-16 Score=126.22 Aligned_cols=109 Identities=12% Similarity=0.188 Sum_probs=84.6
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
..|+++|+++|++.+.+.+.+..++|+|||+ ||++|+.+.|.++++|+.+. ++.|+++|++++ .++
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~----wc~~C~~~~p~l~~la~~~~-------~v~f~kvd~d~~---~~~ 68 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRS----SIPMCLLVNQHLSLLARKFP-------ETKFVKAIVNSC---IQH 68 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECT----TSHHHHHHHHHHHHHHHHCT-------TSEEEEEEGGGT---STT
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCC----CChHHHHHHHHHHHHHHHCC-------CCEEEEEEhHHh---HHH
Confidence 3589999999999886554455799999999 99999999999999999874 599999999987 489
Q ss_pred CCcccCceEEEecCCCCCCCCCcc-ceeecccCHHHHHHHHHhh
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTL-DIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~-~~~~~~~~a~~l~~fI~~~ 168 (314)
++|+++||+++|+.|......... +......+.+++..+|.+.
T Consensus 69 ~~v~~~PT~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 69 YHDNCLPTIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp CCGGGCSEEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 999999999999987211100000 0001135789999999774
No 43
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.66 E-value=3.6e-16 Score=119.83 Aligned_cols=103 Identities=19% Similarity=0.286 Sum_probs=88.0
Q ss_pred eEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCC
Q psy8429 48 VLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR 127 (314)
Q Consensus 48 VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~ 127 (314)
|+++|+++|++.+. . +..++++|+++ ||++|+.+.|.++++++.+. + +.|+.+|++++++++++++
T Consensus 1 V~~l~~~~~~~~~~-~--~~~~~v~f~~~----~C~~C~~~~~~~~~~~~~~~------~-~~~~~v~~~~~~~~~~~~~ 66 (104)
T 2e0q_A 1 VIHLDSKNFDSFLA-S--HEIAVVDFWAE----WCAPCLILAPIIEELAEDYP------Q-VGFGKLNSDENPDIAARYG 66 (104)
T ss_dssp CEECCTTTHHHHHH-H--SSEEEEEEECT----TCHHHHHHHHHHHHHHHHCT------T-SEEEEEETTTCHHHHHHTT
T ss_pred CeecCHHHHHHHHh-c--CCcEEEEEECC----CChhHHHHhHHHHHHHHHcC------C-ceEEEEECCCCHHHHHhCC
Confidence 67899999999984 2 34689999999 99999999999999998874 3 9999999999999999999
Q ss_pred cccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 128 LNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 128 v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
++++|++++|+.| +. .....|..+.+++.+|+++.++
T Consensus 67 v~~~Pt~~~~~~g-~~-----~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 67 VMSLPTVIFFKDG-EP-----VDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp CCSSCEEEEEETT-EE-----EEEEESCCCHHHHHHHHHHHHT
T ss_pred ccccCEEEEEECC-eE-----hhhccCCCCHHHHHHHHHHHhc
Confidence 9999999999654 32 1222467789999999998765
No 44
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.65 E-value=6.8e-16 Score=138.40 Aligned_cols=118 Identities=13% Similarity=0.193 Sum_probs=95.4
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC--CCCcch
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF--DEGSDV 122 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~--~~~~~l 122 (314)
.++|.+||+++|++.+.++ +..++|+|||+ ||++|+++.|+|+++|+.+... ..++.|+++|+ ++++++
T Consensus 11 ~~~v~~l~~~~f~~~i~~~--~~~vlv~F~a~----wC~~C~~~~p~~~~l~~~~~~~---~~~v~~~~vd~~~~~~~~l 81 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVLGS--RSAWAVEFFAS----WCGHCIAFAPTWXALAEDVKAW---RPALYLAALDCAEETNSAV 81 (244)
T ss_dssp TSSSEEECTTTHHHHHSSC--SSEEEEEEECT----TCHHHHHHHHHHHHHHHHTGGG---TTTEEEEEEETTSTTTHHH
T ss_pred CCCceeCChhhHHHHHhhC--CCeEEEEEECC----cCHHHHHHHHHHHHHHHHHHhc---cCcEEEEEEeCCchhhHHH
Confidence 4679999999999988533 45789999999 9999999999999999998621 13699999999 668999
Q ss_pred HHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCcc
Q psy8429 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (314)
Q Consensus 123 f~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~i 173 (314)
+++++|+++||+++|+++++..+.... ..++.+++++.+++.+.++.+.
T Consensus 82 ~~~~~v~~~Pt~~~~~~g~~~~~g~~~--~~~g~~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 82 CRDFNIPGFPTVRFFXAFTXNGSGAVF--PVAGADVQTLRERLIDALESHH 130 (244)
T ss_dssp HHHTTCCSSSEEEEECTTCCSSSCEEC--CCTTCCHHHHHHHHHHHHHTCT
T ss_pred HHHcCCCccCEEEEEeCCCcCCCCeeE--ecCCCCHHHHHHHHHHHHHhcc
Confidence 999999999999999987432211122 2355799999999998876543
No 45
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.65 E-value=8.8e-16 Score=118.58 Aligned_cols=104 Identities=15% Similarity=0.236 Sum_probs=86.8
Q ss_pred eEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhC
Q psy8429 48 VLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (314)
Q Consensus 48 VI~Lt~-~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~ 126 (314)
|+++++ ++|++.+.+ .++..+++.|+++ ||++|+.+.|.++++++.+. +++.|+.+|+++++++++++
T Consensus 2 v~~l~~~~~~~~~l~~-~~~~~~vv~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~~~v~~~~~~~~~~~~ 70 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTK-ASGKLVVLDFFAT----WCGPCKMISPKLVELSTQFA------DNVVVLKVDVDECEDIAMEY 70 (106)
T ss_dssp EEECCSHHHHHHHHHH-HTTSEEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTEEEEEEETTTCHHHHHHT
T ss_pred ceecCCHHHHHHHHHh-cCCCEEEEEEECC----cCHHHHHhhHHHHHHHHHhC------CCeEEEEEeccchHHHHHHc
Confidence 678888 999998853 2356799999999 99999999999999999875 46999999999999999999
Q ss_pred CcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 127 ~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
+++++|++++|+.| +. .....| .+++++.++|++.+
T Consensus 71 ~v~~~Pt~~~~~~G-~~-----~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 71 NISSMPTFVFLKNG-VK-----VEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp TCCSSSEEEEEETT-EE-----EEEEES-CCHHHHHHHHHHTC
T ss_pred CCCcccEEEEEcCC-cE-----EEEEcC-CCHHHHHHHHHHhC
Confidence 99999999999765 32 122234 78899999998753
No 46
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.65 E-value=8.2e-16 Score=142.78 Aligned_cols=117 Identities=17% Similarity=0.247 Sum_probs=95.4
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC--CCcch
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD--EGSDV 122 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~--~~~~l 122 (314)
.+.|++||+++|++.+.+ .+..++|+|||+ ||++|+++.|+|+++|+.+. +.+.|+.+|++ +++++
T Consensus 16 ~~~vv~lt~~~f~~~i~~--~~~~vlV~F~A~----wC~~C~~~~p~~~~la~~~~------~~~~~~~v~~d~~~~~~l 83 (298)
T 3ed3_A 16 DPHISELTPKSFDKAIHN--TNYTSLVEFYAP----WCGHCKKLSSTFRKAAKRLD------GVVQVAAVNCDLNKNKAL 83 (298)
T ss_dssp CTTCEECCHHHHHHHHTS--SSSCEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTSEEEEEETTSTTTHHH
T ss_pred CCCeEEeCHHHHHHHHHh--CCCeEEEEEECC----CCHHHHHHHHHHHHHHHHcc------CCcEEEEEEccCccCHHH
Confidence 356999999999999842 356799999999 99999999999999999985 45889999988 68999
Q ss_pred HHhCCcccCceEEEecCCCCCC------------CCCccceeecccCHHHHHHHHHhhcCCcce
Q psy8429 123 FQMLRLNTAPIFMHFPAKGKPK------------PSDTLDIQRVGYSAEAIVKWIADRTDIQIR 174 (314)
Q Consensus 123 f~~~~v~svPtl~~f~p~~~~~------------~~~~~~~~~~~~~a~~l~~fI~~~~~~~i~ 174 (314)
+++++|+++||+++|++|+... .....++ .|++++++|.+|+.++++..+.
T Consensus 84 ~~~~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y-~G~r~~~~i~~fl~~~~~~~v~ 146 (298)
T 3ed3_A 84 CAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVY-SGARTLAPIVDFSLSRIRSYVK 146 (298)
T ss_dssp HHHTTCCBSSEEEEEECCCC-------------CCCEEEEC-CSCCSHHHHHHHHHTTCCCCEE
T ss_pred HHhCCCCccceEEEEECCceeecccccccccccccccceee-cCCcCHHHHHHHHHHhcccccE
Confidence 9999999999999999873100 0001122 5789999999999999987653
No 47
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.64 E-value=2.5e-16 Score=130.92 Aligned_cols=107 Identities=7% Similarity=0.078 Sum_probs=76.7
Q ss_pred CeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCC--CccchhhHHHHHHHHHHhccccCCCCcEE--EEEEECCCCcch
Q psy8429 47 AVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRN--CHICVSASDEYTIVANSFRYSQMYSNKLF--FILVDFDEGSDV 122 (314)
Q Consensus 47 ~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~--C~~C~~~~pefe~vA~s~~~~~~~~~~v~--F~~vD~~~~~~l 122 (314)
++..+|+++|++.+.++ ..++|+|++. | |++|+.+.|.++++|+.+ . ++. |+++|+|+++++
T Consensus 18 ~~~~l~~~~f~~~i~~~---~~~vv~f~~~----~~~C~~C~~l~P~l~~la~~~-~------~v~~~~~~Vd~d~~~~l 83 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRV---GDGVILLSSD----PRRTPEVSDNPVMIAELLREF-P------QFDWQVAVADLEQSEAI 83 (142)
T ss_dssp TCEECCCC--------C---CSEEEEECCC----SCC----CCHHHHHHHHHHTC-T------TSCCEEEEECHHHHHHH
T ss_pred cCcccccccHHHHHHhC---CCEEEEEECC----CCCCccHHHHHHHHHHHHHHh-c------ccceeEEEEECCCCHHH
Confidence 89999999999997532 2378899887 6 999999999999999987 2 477 999999999999
Q ss_pred HHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCcc
Q psy8429 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (314)
Q Consensus 123 f~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~i 173 (314)
+++|+|+++||+++|+.| +.. +...|..+.+++.+||++.++...
T Consensus 84 a~~~~V~~iPT~~~fk~G-~~v-----~~~~G~~~~~~l~~~i~~~l~~~~ 128 (142)
T 2es7_A 84 GDRFNVRRFPATLVFTDG-KLR-----GALSGIHPWAELLTLMRSIVDTPA 128 (142)
T ss_dssp HHTTTCCSSSEEEEESCC----------CEESCCCHHHHHHHHHHHHC---
T ss_pred HHhcCCCcCCeEEEEeCC-EEE-----EEEeCCCCHHHHHHHHHHHhcccc
Confidence 999999999999999765 431 222577889999999999987554
No 48
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.64 E-value=7.4e-16 Score=120.52 Aligned_cols=108 Identities=19% Similarity=0.304 Sum_probs=87.7
Q ss_pred CCeEEe-ChhhHHHHHHcCC-CCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchH
Q psy8429 46 KAVLRF-DGQKYKEYIKNGP-RNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (314)
Q Consensus 46 ~~VI~L-t~~nf~~~v~~~~-r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (314)
+.|+++ ++++|++.+.+.. ++..++++||++ ||++|+.+.|.++++++.+. +++.|+.+|++++++++
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~~~vd~~~~~~~~ 71 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTAT----WCGPCKMIAPLFETLSNDYA------GKVIFLKVDVDAVAAVA 71 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTCCEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTSEEEEEETTTTHHHH
T ss_pred CcEEEecCHHHHHHHHHhhcccCCeEEEEEECC----CCHHHHHHHHHHHHHHHHcC------CCeEEEEEECCchHHHH
Confidence 358899 5689999985311 134689999999 99999999999999999875 36999999999999999
Q ss_pred HhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
++++++++||+++|+.| +. .....|. +.+++.++|++.+.
T Consensus 72 ~~~~v~~~Pt~~~~~~G-~~-----~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 72 EAAGITAMPTFHVYKDG-VK-----ADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp HHHTCCBSSEEEEEETT-EE-----EEEEESC-CHHHHHHHHHHHHC
T ss_pred HHcCCCcccEEEEEECC-eE-----EEEEcCC-CHHHHHHHHHHHhc
Confidence 99999999999999765 32 1222344 89999999998753
No 49
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.63 E-value=7.9e-16 Score=150.84 Aligned_cols=112 Identities=15% Similarity=0.183 Sum_probs=96.5
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
+.|++||++||++.+.+..++..++|+|||+ ||++|+.+.|+|+++|+.+. +.+.|++||++++++++++
T Consensus 1 s~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~----wC~~C~~~~p~~~~~a~~~~------~~v~~~~vd~~~~~~l~~~ 70 (481)
T 3f8u_A 1 SDVLELTDDNFESRISDTGSAGLMLVEFFAP----WCGHAKRLAPEYEAAATRLK------GIVPLAKVDCTANTNTCNK 70 (481)
T ss_dssp CCCEEECTTTHHHHTTCCSSSSEEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTCCEEEEETTTCHHHHHH
T ss_pred CceEEecHHHHHHHHHhCCCCCeEEEEEECC----CCHHHHHhHHHHHHHHHHhc------CceEEEEEECCCCHHHHHh
Confidence 4689999999999985444447899999999 99999999999999999986 3599999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCcc
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~i 173 (314)
++|+++||+++|++|... ....|+++++.+.+|+.+.++..+
T Consensus 71 ~~v~~~Ptl~~~~~g~~~------~~~~G~~~~~~l~~~~~~~~~~~~ 112 (481)
T 3f8u_A 71 YGVSGYPTLKIFRDGEEA------GAYDGPRTADGIVSHLKKQAGPAS 112 (481)
T ss_dssp TTCCEESEEEEEETTEEE------EECCSCSSHHHHHHHHHHHTSCSE
T ss_pred cCCCCCCEEEEEeCCcee------eeecCccCHHHHHHHHHhhcccCc
Confidence 999999999999876211 122578999999999999998764
No 50
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.63 E-value=1.2e-15 Score=124.95 Aligned_cols=106 Identities=15% Similarity=0.197 Sum_probs=76.6
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
+.++++|+++|++.+.++ +. ++|+||++ ||++|+.+.|.++++++.+. +++.|+.+|++++++++++
T Consensus 33 ~~v~~l~~~~~~~~~~~~--~~-vvv~f~~~----~C~~C~~~~~~l~~l~~~~~------~~v~~~~vd~~~~~~l~~~ 99 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGA--PL-TLVDFFAP----WCGPCRLVSPILEELARDHA------GRLKVVKVNVDEHPGLAAR 99 (140)
T ss_dssp ----------------CC--CE-EEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTEEEEEEETTTCHHHHHH
T ss_pred CccccCCHHHHHHHHHcC--CC-EEEEEECC----CCHHHHHHHHHHHHHHHHcc------CceEEEEEECCCCHHHHHH
Confidence 458999999999987533 34 99999999 99999999999999999885 4699999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
|+++++||+++|+.| +. .....|..+.+++.+||++.++
T Consensus 100 ~~v~~~Pt~~~~~~G-~~-----~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 100 YGVRSVPTLVLFRRG-AP-----VATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp TTCCSSSEEEEEETT-EE-----EEEEESCCCHHHHHHHHHHHHT
T ss_pred CCCCccCEEEEEeCC-cE-----EEEEeCCCCHHHHHHHHHHHHc
Confidence 999999999999765 32 2223567789999999998764
No 51
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.63 E-value=8.7e-16 Score=146.86 Aligned_cols=117 Identities=21% Similarity=0.241 Sum_probs=93.8
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
+.|++||++||++.+.+ +..++|.|||+ ||++|+.+.|+|+++|+.+....+..+++.|++||++++++++++
T Consensus 5 ~~v~~l~~~~f~~~~~~---~~~vlV~F~a~----wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~ 77 (382)
T 2r2j_A 5 SEITSLDTENIDEILNN---ADVALVNFYAD----WCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQR 77 (382)
T ss_dssp ---CBCCTTTHHHHHHH---CSEEEEEEECT----TCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHH
T ss_pred CceEECCHHHHHHHHhc---CCeEEEEEECC----CCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHh
Confidence 45899999999998743 34689999999 999999999999999999854322235699999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCcce
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQIR 174 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~i~ 174 (314)
++|+++||+++|+.| +.. .....|+++++++.+|+.++++..+.
T Consensus 78 ~~v~~~Pt~~~f~~G-~~~----~~~~~G~~~~~~l~~~i~~~~~~~v~ 121 (382)
T 2r2j_A 78 YRISKYPTLKLFRNG-MMM----KREYRGQRSVKALADYIRQQKSDPIQ 121 (382)
T ss_dssp TTCCEESEEEEEETT-EEE----EEECCSCCSHHHHHHHHHHHHSCCCE
T ss_pred cCCCcCCEEEEEeCC-cEe----eeeecCcchHHHHHHHHHHhccCCce
Confidence 999999999999876 321 00125788999999999999987653
No 52
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.63 E-value=1.9e-15 Score=116.62 Aligned_cols=103 Identities=17% Similarity=0.294 Sum_probs=84.8
Q ss_pred eEEe-ChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhC
Q psy8429 48 VLRF-DGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (314)
Q Consensus 48 VI~L-t~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~ 126 (314)
+.++ |+++|++.+.+ .++..++++|+++ ||++|+.+.|.++++++.+. ++.|+.+|+++++++++++
T Consensus 2 v~~i~~~~~~~~~l~~-~~~~~~~v~f~~~----~C~~C~~~~~~~~~~~~~~~-------~~~~~~vd~~~~~~~~~~~ 69 (105)
T 3m9j_A 2 VKQIESKTAFQEALDA-AGDKLVVVDFSAT----WCGPCKMIKPFFHSLSEKYS-------NVIFLEVDVDDCQDVASES 69 (105)
T ss_dssp CEECCSHHHHHHHHHH-TTTSCEEEEEECT----TCHHHHHHHHHHHHHHHHST-------TSEEEEEETTTCHHHHHHT
T ss_pred eEEcCCHHHHHHHHHh-cCCCeEEEEEECC----CChhhHHHHHHHHHHHHHcc-------CeEEEEEEhhhhHHHHHHc
Confidence 3456 46889998753 2456799999999 99999999999999999874 3999999999999999999
Q ss_pred CcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 127 ~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
+++++|++++|++| +. .....|. +.+++.+++++.+
T Consensus 70 ~v~~~Pt~~~~~~g-~~-----~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 70 EVKSMPTFQFFKKG-QK-----VGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp TCCBSSEEEEEETT-EE-----EEEEESS-CHHHHHHHHHHHC
T ss_pred CCCcCcEEEEEECC-eE-----EEEEeCC-CHHHHHHHHHHhC
Confidence 99999999999765 32 2222355 9999999998763
No 53
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.63 E-value=2e-15 Score=120.71 Aligned_cols=106 Identities=12% Similarity=0.234 Sum_probs=87.4
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC-CCcchH
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-EGSDVF 123 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~-~~~~lf 123 (314)
.+.++++|+++|++.+.+ .++..++|.|||+ ||++|+++.|.++++++.+. ++.|+.+|++ ++++++
T Consensus 17 ~~~v~~l~~~~~~~~~~~-~~~~~~vv~f~a~----wC~~C~~~~~~l~~~~~~~~-------~~~~~~vd~~~~~~~~~ 84 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKA-AGDKPVVLDMFTQ----WCGPCKAMAPKYEKLAEEYL-------DVIFLKLDCNQENKTLA 84 (124)
T ss_dssp TTSEEEECTTTHHHHHHH-TTTSCEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TSEEEEEECSSTTHHHH
T ss_pred CCceEEecchhHHHHHHh-cCCCEEEEEEECC----cCHhHHHHhHHHHHHHHHCC-------CCEEEEEecCcchHHHH
Confidence 456999999999998853 2356799999999 99999999999999999874 4899999998 689999
Q ss_pred HhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
++++++++||++++++| +. .....| ...+++.+++++..
T Consensus 85 ~~~~v~~~Pt~~~~~~G-~~-----~~~~~G-~~~~~l~~~i~~~~ 123 (124)
T 1faa_A 85 KELGIRVVPTFKILKEN-SV-----VGEVTG-AKYDKLLEAIQAAR 123 (124)
T ss_dssp HHHCCSSSSEEEEEETT-EE-----EEEEES-SCHHHHHHHHHHHT
T ss_pred HHcCCCeeeEEEEEeCC-cE-----EEEEcC-CCHHHHHHHHHHhh
Confidence 99999999999999875 32 122233 45899999998764
No 54
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=1.1e-16 Score=130.95 Aligned_cols=85 Identities=20% Similarity=0.240 Sum_probs=76.1
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
+.|+++|+++|++.+. ..++..++|+|||+ ||++|+++.|+++++|+.+.. +++.|+++|++++++++++
T Consensus 7 ~~v~~l~~~~f~~~~~-~~~~~~vlv~f~a~----wC~~C~~~~p~~~~l~~~~~~-----~~v~~~~vd~~~~~~~~~~ 76 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELE-RDKRVTWIVEFFAN----WSNDCQSFAPIYADLSLKYNC-----TGLNFGKVDVGRYTDVSTR 76 (137)
T ss_dssp SCCEECCTTHHHHHHH-HSTTSCEEEEECCT----TCSTTTTTHHHHHHHHHHHCS-----SSCEEEECCTTTCHHHHHH
T ss_pred ceEEEccHhhHHHHHh-cCCCCEEEEEEECC----CCHHHHHHHHHHHHHHHHhCC-----CCeEEEEEeCccCHHHHHH
Confidence 4599999999999985 44556799999999 999999999999999999852 3699999999999999999
Q ss_pred CCcc------cCceEEEecCC
Q psy8429 126 LRLN------TAPIFMHFPAK 140 (314)
Q Consensus 126 ~~v~------svPtl~~f~p~ 140 (314)
++++ ++||+++|+.|
T Consensus 77 ~~v~~~~~~~~~Pt~~~~~~G 97 (137)
T 2dj0_A 77 YKVSTSPLTKQLPTLILFQGG 97 (137)
T ss_dssp TTCCCCSSSSCSSEEEEESSS
T ss_pred ccCcccCCcCCCCEEEEEECC
Confidence 9999 99999999765
No 55
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.63 E-value=1.3e-15 Score=123.19 Aligned_cols=103 Identities=18% Similarity=0.273 Sum_probs=87.0
Q ss_pred CeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 47 AVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 47 ~VI~Lt~-~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
-|+++++ ++|++.+. . +..++|+|||+ ||++|+.+.|+++++++.+. ++.|+.+|++++++++++
T Consensus 20 mv~~l~~~~~f~~~~~-~--~k~vvv~F~a~----wC~~C~~~~p~l~~l~~~~~-------~v~~~~vd~d~~~~l~~~ 85 (125)
T 1r26_A 20 SVVDVYSVEQFRNIMS-E--DILTVAWFTAV----WCGPCKTIERPMEKIAYEFP-------TVKFAKVDADNNSEIVSK 85 (125)
T ss_dssp CCEEECCHHHHHHHHH-S--SSCEEEEEECT----TCHHHHHTHHHHHHHHHHCT-------TSEEEEEETTTCHHHHHH
T ss_pred ceEECCCHHHHHHHHc-c--CCEEEEEEECC----cCHhHHHHHHHHHHHHHHCC-------CCEEEEEECCCCHHHHHH
Confidence 3899999 99999873 3 45689999999 99999999999999999873 599999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
++++++||+++|+.| +. .....| .+.+++.++|++.++
T Consensus 86 ~~v~~~Pt~~i~~~G-~~-----~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 86 CRVLQLPTFIIARSG-KM-----LGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp TTCCSSSEEEEEETT-EE-----EEEEES-SCHHHHHHHHHHHHH
T ss_pred cCCCcccEEEEEeCC-eE-----EEEEeC-CCHHHHHHHHHHHhc
Confidence 999999999999765 32 122234 688999999988764
No 56
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.62 E-value=6.3e-16 Score=120.32 Aligned_cols=101 Identities=15% Similarity=0.160 Sum_probs=71.7
Q ss_pred EEe-ChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCC
Q psy8429 49 LRF-DGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR 127 (314)
Q Consensus 49 I~L-t~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~ 127 (314)
.++ |+++|++.+. . +..++|.|||+ ||++|+.+.|.++++++.+. ++.|+++|++++++++++++
T Consensus 3 ~~i~~~~~~~~~~~-~--~~~vlv~f~a~----wC~~C~~~~p~~~~~~~~~~-------~~~~~~vd~~~~~~l~~~~~ 68 (105)
T 4euy_A 3 NTFKTIEELATYIE-E--QQLVLLFIKTE----NCGVCDVMLRKVNYVLENYN-------YVEKIEILLQDMQEIAGRYA 68 (105)
T ss_dssp -------CCSSSTT-C--SSEEEEEEEES----SCHHHHHHHHHHHHHHHTCT-------TEEEEEEEECCC--------
T ss_pred cccCCHHHHHHHHh-c--CCCEEEEEeCC----CCcchHHHHHHHHHHHHHcC-------CceEEEEECCCCHHHHHhcC
Confidence 445 4477888762 3 45699999999 99999999999999999872 59999999999999999999
Q ss_pred cccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 128 LNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 128 v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
++++||+++|+.| +. .....|..+.+++.+++++..
T Consensus 69 v~~~Pt~~~~~~G-~~-----~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 69 VFTGPTVLLFYNG-KE-----ILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp -CCCCEEEEEETT-EE-----EEEEESSCCHHHHHHHHHTTC
T ss_pred CCCCCEEEEEeCC-eE-----EEEEeCCcCHHHHHHHHHHhh
Confidence 9999999999865 32 233357779999999998764
No 57
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.62 E-value=4e-15 Score=118.43 Aligned_cols=107 Identities=17% Similarity=0.236 Sum_probs=87.5
Q ss_pred CeEEeChhhHHHHHHcC-CCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 47 AVLRFDGQKYKEYIKNG-PRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 47 ~VI~Lt~~nf~~~v~~~-~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
.+..+|+++|++.+.+. +++..++|+||++ ||++|+.+.|.++++++.+. + +.|+.+|++++++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~----~C~~C~~~~~~l~~~~~~~~------~-~~~~~vd~~~~~~~~~~ 82 (122)
T 2vlu_A 14 VISVHSLEQWTMQIEEANTAKKLVVIDFTAS----WCGPCRIMAPVFADLAKKFP------N-AVFLKVDVDELKPIAEQ 82 (122)
T ss_dssp CEEECSHHHHHHHHHHHHHTTCCEEEEEECT----TCHHHHHHHHHHHHHHHHCT------T-SEEEEEETTTCHHHHHH
T ss_pred ceeccCHHHHHHHHHHhhccCCEEEEEEECC----CCHHHHHHHHHHHHHHHHCC------C-cEEEEEECCCCHHHHHH
Confidence 35667889999988531 1345699999999 99999999999999999874 3 99999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCC
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~ 171 (314)
++++++||+++|+.| +. .....|.. .+++.+||++.++.
T Consensus 83 ~~v~~~Pt~~~~~~G-~~-----~~~~~G~~-~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 83 FSVEAMPTFLFMKEG-DV-----KDRVVGAI-KEELTAKVGLHAAA 121 (122)
T ss_dssp TTCCSSSEEEEEETT-EE-----EEEEESSC-HHHHHHHHHHHHSC
T ss_pred cCCCcccEEEEEeCC-EE-----EEEEeCcC-HHHHHHHHHHHhcc
Confidence 999999999999765 32 12224555 99999999988753
No 58
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.62 E-value=4.1e-15 Score=114.37 Aligned_cols=103 Identities=16% Similarity=0.215 Sum_probs=85.4
Q ss_pred eEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhC
Q psy8429 48 VLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (314)
Q Consensus 48 VI~Lt~-~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~ 126 (314)
|.++++ ++|++.+. ..++..++++|+++ ||++|+.+.|.++++++.+. ++.|+.+|+++++++++++
T Consensus 1 v~~i~~~~~~~~~l~-~~~~~~~~v~f~~~----~C~~C~~~~~~l~~~~~~~~-------~~~~~~v~~~~~~~~~~~~ 68 (104)
T 2vim_A 1 MRVLATAADLEKLIN-ENKGRLIVVDFFAQ----WCGPCRNIAPKVEALAKEIP-------EVEFAKVDVDQNEEAAAKY 68 (104)
T ss_dssp CEECCSHHHHHHHHH-TTTTSCEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TSEEEEEETTTCHHHHHHT
T ss_pred CeecCCHHHHHHHHH-hcCCCeEEEEEECC----CCHHHHHhhHHHHHHHHHCC-------CCEEEEEeccCCHHHHHHc
Confidence 457777 89999875 33456799999999 99999999999999998863 5999999999999999999
Q ss_pred CcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 127 ~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
+++++|++++|+.| +. .....| .+.+++.+|+++.+
T Consensus 69 ~v~~~Pt~~~~~~g-~~-----~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 69 SVTAMPTFVFIKDG-KE-----VDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp TCCSSSEEEEEETT-EE-----EEEEES-SCHHHHHHHHHHHC
T ss_pred CCccccEEEEEeCC-cE-----EEEEeC-CCHHHHHHHHHhhC
Confidence 99999999999865 32 122234 68999999998753
No 59
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.61 E-value=2e-15 Score=119.64 Aligned_cols=104 Identities=13% Similarity=0.243 Sum_probs=86.5
Q ss_pred CCeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH
Q psy8429 46 KAVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (314)
Q Consensus 46 ~~VI~Lt~-~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (314)
++++++++ ++|++.+.+ .++..++|+|||+ ||++|+.+.|.++++++.+ ++.|+.+|+++++++++
T Consensus 13 ~~v~~l~~~~~~~~~l~~-~~~~~~vv~f~a~----wC~~C~~~~~~~~~~~~~~--------~~~~~~vd~~~~~~~~~ 79 (117)
T 2xc2_A 13 SELIELKQDGDLESLLEQ-HKNKLVVVDFFAT----WCGPCKTIAPLFKELSEKY--------DAIFVKVDVDKLEETAR 79 (117)
T ss_dssp CEEEECCSTTHHHHHHHH-TTTSCEEEEEECT----TCHHHHHHHHHHHHHHTTS--------SSEEEEEETTTSHHHHH
T ss_pred heeEEeCCHHHHHHHHHh-CCCCEEEEEEECC----CCHhHHHHhHHHHHHHHHc--------CcEEEEEECCccHHHHH
Confidence 34899998 999998853 2456799999999 9999999999999999765 48999999999999999
Q ss_pred hCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 125 ~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
+++++++||+++|+.| +. .....| .+.+++.++|++.+
T Consensus 80 ~~~v~~~Pt~~~~~~G-~~-----~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 80 KYNISAMPTFIAIKNG-EK-----VGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp HTTCCSSSEEEEEETT-EE-----EEEEES-SCHHHHHHHHHHHC
T ss_pred HcCCCccceEEEEeCC-cE-----EEEEeC-CCHHHHHHHHHHhC
Confidence 9999999999999765 32 122234 68899999998763
No 60
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.61 E-value=5.6e-15 Score=121.02 Aligned_cols=111 Identities=11% Similarity=0.163 Sum_probs=88.5
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
..++++|+++|++.+.+..++..++|.|||+ ||++|+.+.|.++++|+.+. ++.|+++|+++++ ++
T Consensus 10 g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~----wC~~C~~~~p~l~~la~~~~-------~v~~~~vd~~~~~---~~ 75 (135)
T 2dbc_A 10 GELREISGNQYVNEVTNAEKDLWVVIHLYRS----SVPMCLVVNQHLSVLARKFP-------ETKFVKAIVNSCI---EH 75 (135)
T ss_dssp CSCEECCHHHHHHHTTTCCSSCEEEEEECCT----TCHHHHHHHHHHHHHHHHCS-------SEEEEEECCSSSC---SS
T ss_pred CceEEcCHHHHHHHHHhcCCCCEEEEEEECC----CChHHHHHHHHHHHHHHHCC-------CcEEEEEEhhcCc---cc
Confidence 3489999999999886444446799999999 99999999999999999873 5999999999986 68
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecc-------cCHHHHHHHHHhhcCCcceee
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVG-------YSAEAIVKWIADRTDIQIRVF 176 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~-------~~a~~l~~fI~~~~~~~i~i~ 176 (314)
|+|+++||+++|+.| +.. +...|. .+.++|.++|+++..++.+..
T Consensus 76 ~~i~~~Pt~~~~~~G-~~v-----~~~~G~~~~~~~~~~~~~l~~~l~~~~~i~~~~~ 127 (135)
T 2dbc_A 76 YHDNCLPTIFVYKNG-QIE-----GKFIGIIECGGINLKLEELEWKLSEVGAIQSDLE 127 (135)
T ss_dssp CCSSCCSEEEEESSS-SCS-----EEEESTTTTTCTTCCHHHHHHHHHHHTSSCCCSC
T ss_pred CCCCCCCEEEEEECC-EEE-----EEEEeEEeeCCCcCCHHHHHHHHHHcCCcccccc
Confidence 999999999999865 331 111222 378999999999865554333
No 61
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.61 E-value=2.8e-15 Score=131.54 Aligned_cols=109 Identities=13% Similarity=0.200 Sum_probs=92.9
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
..++++++++|++.+.+ +..++|.|||+ ||++|+.+.|+++++++.+. +++.|+.+|++++++++++
T Consensus 97 ~~v~~l~~~~f~~~~~~---~~~vlv~F~a~----wC~~C~~~~p~~~~l~~~~~------~~v~~~~vd~~~~~~l~~~ 163 (210)
T 3apq_A 97 PEIITLERREFDAAVNS---GELWFVNFYSP----GCSHCHDLAPTWREFAKEVD------GLLRIGAVNCGDDRMLCRM 163 (210)
T ss_dssp TTSEECCHHHHHHHHHH---SCCEEEEEECT----TCHHHHHHHHHHHHHHHHTB------TTBEEEEEETTTCHHHHHH
T ss_pred CceEEecHHHHHHHHcc---CCcEEEEEeCC----CChhHHHHHHHHHHHHHHhc------CceEEEEEECCccHHHHHH
Confidence 45899999999998742 34689999999 99999999999999999885 4699999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCcc
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~i 173 (314)
++|+++||+++|+.| +. .....|..+.+++.+||++.++..+
T Consensus 164 ~~v~~~Pt~~~~~~G-~~-----~~~~~G~~~~~~l~~~i~~~l~~~~ 205 (210)
T 3apq_A 164 KGVNSYPSLFIFRSG-MA-----AVKYNGDRSKESLVAFAMQHVRSTV 205 (210)
T ss_dssp TTCCSSSEEEEECTT-SC-----CEECCSCCCHHHHHHHHHHHHHCCS
T ss_pred cCCCcCCeEEEEECC-Cc-----eeEecCCCCHHHHHHHHHHhCcccc
Confidence 999999999999665 32 1222467899999999999987654
No 62
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.60 E-value=4.5e-15 Score=119.60 Aligned_cols=107 Identities=21% Similarity=0.269 Sum_probs=87.7
Q ss_pred CCCeEEe-ChhhHHHHHHcC-CCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcch
Q psy8429 45 KKAVLRF-DGQKYKEYIKNG-PRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDV 122 (314)
Q Consensus 45 ~~~VI~L-t~~nf~~~v~~~-~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~l 122 (314)
...|+++ |.++|++.+... .++..++|+||++ ||++|+.+.|.++++++.+. ++.|+.+|+++++++
T Consensus 15 ~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~----wC~~C~~~~~~l~~l~~~~~-------~v~~~~vd~d~~~~l 83 (124)
T 1xfl_A 15 EGQVIACHTVETWNEQLQKANESKTLVVVDFTAS----WCGPCRFIAPFFADLAKKLP-------NVLFLKVDTDELKSV 83 (124)
T ss_dssp CSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECT----TCHHHHHHHHHHHHHHHHCS-------SEEEEEEETTTSHHH
T ss_pred CCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECC----CCHHHHHHHHHHHHHHHHCC-------CcEEEEEECccCHHH
Confidence 3459999 668999988531 1355799999999 99999999999999998873 599999999999999
Q ss_pred HHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 123 f~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
+++|+++++||+++|+.| +. .....| .+.+++.++|++.+
T Consensus 84 ~~~~~v~~~Pt~~~~~~G-~~-----~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 84 ASDWAIQAMPTFMFLKEG-KI-----LDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp HHHTTCCSSSEEEEEETT-EE-----EEEEES-CCHHHHHHHHHHHC
T ss_pred HHHcCCCccCEEEEEECC-EE-----EEEEeC-CCHHHHHHHHHHhc
Confidence 999999999999999765 32 122234 68999999998865
No 63
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.60 E-value=4.2e-15 Score=146.68 Aligned_cols=114 Identities=19% Similarity=0.277 Sum_probs=96.1
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (314)
+++|++||++||++.+. . +..++|.|||+ ||++|+.+.|+|+++|+.+.. .++.|++||+++++++++
T Consensus 13 ~~~v~~l~~~~f~~~~~-~--~~~~lv~F~a~----wC~~C~~~~p~~~~~a~~~~~-----~~v~~~~vd~~~~~~l~~ 80 (504)
T 2b5e_A 13 DSAVVKLATDSFNEYIQ-S--HDLVLAEFFAP----WCGHCKNMAPEYVKAAETLVE-----KNITLAQIDCTENQDLCM 80 (504)
T ss_dssp TSSCEECCTTTHHHHHT-T--CSEEEEEEECT----TCHHHHHHHHHHHHHHHHTTT-----TTCEEEEEETTTCHHHHH
T ss_pred CCCcEECCHHHHHHHHh-c--CCeEEEEEECC----CCHHHHHhHHHHHHHHHHhcc-----CCeEEEEEECCCCHHHHH
Confidence 46799999999999873 3 45789999999 999999999999999999862 259999999999999999
Q ss_pred hCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCcce
Q psy8429 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQIR 174 (314)
Q Consensus 125 ~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~i~ 174 (314)
+++|+++||+++|++|... . .....|.++++.+.+|+.+.++..+.
T Consensus 81 ~~~v~~~Pt~~~~~~g~~~-~---~~~~~G~~~~~~l~~~l~~~~~~~v~ 126 (504)
T 2b5e_A 81 EHNIPGFPSLKIFKNSDVN-N---SIDYEGPRTAEAIVQFMIKQSQPAVA 126 (504)
T ss_dssp HTTCCSSSEEEEEETTCTT-C---EEECCSCCSHHHHHHHHHHHTSCSEE
T ss_pred hcCCCcCCEEEEEeCCccc-c---ceeecCCCCHHHHHHHHHHhcCCcce
Confidence 9999999999999986320 0 11225788999999999999987653
No 64
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.60 E-value=5.8e-15 Score=123.14 Aligned_cols=109 Identities=16% Similarity=0.252 Sum_probs=90.5
Q ss_pred CCCeEEeC-hhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchH
Q psy8429 45 KKAVLRFD-GQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (314)
Q Consensus 45 ~~~VI~Lt-~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (314)
.+.+++++ .++|++.+.+ .++..++|+|||+ ||++|+.+.|.++++++.+ +++.|+++|++++++++
T Consensus 11 ~~~v~~l~~~~~~~~~~~~-~~~~~vvv~F~a~----wC~~C~~~~p~l~~l~~~~-------~~v~~~~vd~~~~~~l~ 78 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRL-KAKSLLVVHFWAP----WAPQCAQMNEVMAELAKEL-------PQVSFVKLEAEGVPEVS 78 (153)
T ss_dssp -CCSEEECSHHHHHHHHHH-TTTSCEEEEEECT----TCHHHHHHHHHHHHHHHHC-------TTSEEEEEETTTSHHHH
T ss_pred cCCeEEcCCHHHHHHHHHh-cCCCeEEEEEECC----CCHhHHHHHHHHHHHHHHc-------CCeEEEEEECCCCHHHH
Confidence 35689998 4899998754 2356799999999 9999999999999999986 25999999999999999
Q ss_pred HhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
++|+++++|++++|..| +. ... ..|.+.+++.+||++.++..
T Consensus 79 ~~~~v~~~Pt~~~~~~G-~~-----~~~-~~G~~~~~l~~~i~~~l~~~ 120 (153)
T 2wz9_A 79 EKYEISSVPTFLFFKNS-QK-----IDR-LDGAHAPELTKKVQRHASSG 120 (153)
T ss_dssp HHTTCCSSSEEEEEETT-EE-----EEE-EESSCHHHHHHHHHHHSCTT
T ss_pred HHcCCCCCCEEEEEECC-EE-----EEE-EeCCCHHHHHHHHHHHhccc
Confidence 99999999999999954 32 122 23467889999999998754
No 65
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.60 E-value=3.9e-15 Score=131.85 Aligned_cols=111 Identities=15% Similarity=0.258 Sum_probs=94.1
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (314)
+++|+++|+++|++.+. . +..++|+|||+ ||++|+++.|+++++|+.+... ..++.|+.+|+++++++++
T Consensus 14 ~~~v~~l~~~~~~~~~~-~--~~~v~v~F~a~----wC~~C~~~~p~~~~~~~~~~~~---~~~~~~~~vd~~~~~~l~~ 83 (241)
T 3idv_A 14 ENGVLVLNDANFDNFVA-D--KDTVLLEFYAP----WCGHCKQFAPEYEKIANILKDK---DPPIPVAKIDATSASVLAS 83 (241)
T ss_dssp ETTEEEECTTTHHHHHT-T--CSEEEEEEECT----TCHHHHHHHHHHHHHHHHHHTS---SSCCCEEEEETTTCHHHHH
T ss_pred CCCcEEecccCHHHHHh-c--CCeEEEEEECC----CCHHHHHhhHHHHHHHHHHhhc---CCceEEEEEeccCCHHHHH
Confidence 46799999999999874 3 45689999999 9999999999999999998631 2349999999999999999
Q ss_pred hCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 125 ~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
+|+|+++||+++|++| +. .+. .|+.+.+++.+|+.+.++..
T Consensus 84 ~~~v~~~Pt~~~~~~g-~~-----~~~-~g~~~~~~l~~~i~~~~~~~ 124 (241)
T 3idv_A 84 RFDVSGYPTIKILKKG-QA-----VDY-EGSRTQEEIVAKVREVSQPD 124 (241)
T ss_dssp HTTCCSSSEEEEEETT-EE-----EEC-CSCSCHHHHHHHHHHHHSTT
T ss_pred hcCCCcCCEEEEEcCC-Cc-----ccc-cCcccHHHHHHHHhhccCcc
Confidence 9999999999999875 32 222 57889999999999987753
No 66
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.59 E-value=1.1e-14 Score=128.92 Aligned_cols=109 Identities=18% Similarity=0.290 Sum_probs=93.1
Q ss_pred CeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhC
Q psy8429 47 AVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (314)
Q Consensus 47 ~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~ 126 (314)
.+..+++++|++.+.++ ..++|+|+|+ ||++|+.+.|+++++|+.+... ..++.|+++|++++++++++|
T Consensus 131 ~~~~~~~~~~~~~~~~~---~~~~v~f~a~----wC~~C~~~~p~~~~~a~~~~~~---~~~v~~~~vd~~~~~~l~~~~ 200 (241)
T 3idv_A 131 VTLVLTKENFDEVVNDA---DIILVEFYAP----WCGHCKKLAPEYEKAAKELSKR---SPPIPLAKVDATAETDLAKRF 200 (241)
T ss_dssp SSEECCTTTHHHHHHHC---SEEEEEEECT----TCTGGGGTHHHHHHHHHHHHTS---SSCCCEEEEETTTCHHHHHHT
T ss_pred cceeccHHHHHHhhccC---CeEEEEEECC----CCHHHHHhHHHHHHHHHHHhcc---CCcEEEEEEECCCCHHHHHHc
Confidence 48889999999998533 3689999999 9999999999999999998631 235999999999999999999
Q ss_pred CcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 127 ~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
+|+++||+++|++| +. ..+ .|.++.+++.+||+++++..
T Consensus 201 ~v~~~Pt~~~~~~g-~~-----~~~-~g~~~~~~l~~~l~~~~~~~ 239 (241)
T 3idv_A 201 DVSGYPTLKIFRKG-RP-----YDY-NGPREKYGIVDYMIEQSGAA 239 (241)
T ss_dssp TCCSSSEEEEEETT-EE-----EEC-CSCCSHHHHHHHHHHHTTCT
T ss_pred CCcccCEEEEEECC-eE-----EEe-cCCCCHHHHHHHHHhhhCCC
Confidence 99999999999975 32 232 57889999999999998754
No 67
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.59 E-value=9e-15 Score=115.02 Aligned_cols=103 Identities=22% Similarity=0.302 Sum_probs=86.7
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
+....+|+++|++.+. . +..++|+|+++ ||++|+.+.|.++++++.+. ++.|+.+|++++++++++
T Consensus 9 ~~~~~~~~~~f~~~~~-~--~k~vlv~f~a~----~C~~C~~~~~~l~~l~~~~~-------~v~~~~vd~~~~~~~~~~ 74 (112)
T 1syr_A 9 MVKIVTSQAEFDSIIS-Q--NELVIVDFFAE----WCGPCKRIAPFYEECSKTYT-------KMVFIKVDVDEVSEVTEK 74 (112)
T ss_dssp CCEEECSHHHHHHHHH-H--CSEEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TSEEEEEETTTTHHHHHH
T ss_pred eEEEECCHHHHHHHHc-c--CCeEEEEEECC----CCHHHHHHHHHHHHHHHHcC-------CCEEEEEECCCCHHHHHH
Confidence 4477889999999984 2 45789999999 99999999999999998863 499999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
++++++|++++|+.| +. .....|. +.+++.+||++.+
T Consensus 75 ~~v~~~Pt~~~~~~G-~~-----~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 75 ENITSMPTFKVYKNG-SS-----VDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp TTCCSSSEEEEEETT-EE-----EEEEESC-CHHHHHHHHHTTC
T ss_pred cCCCcccEEEEEECC-cE-----EEEEeCC-CHHHHHHHHHHhh
Confidence 999999999999865 32 1222455 8999999998764
No 68
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.59 E-value=9.5e-15 Score=129.39 Aligned_cols=109 Identities=11% Similarity=0.197 Sum_probs=93.1
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
..+..+|+++|++.+.++ +..++|.|||+ ||++|+.+.|.++++++.+. +++.|+.+|++++++++++
T Consensus 12 ~~~~~lt~~~f~~~v~~~--~k~vvv~F~a~----wC~~C~~~~p~l~~l~~~~~------~~v~~~~vd~d~~~~l~~~ 79 (222)
T 3dxb_A 12 DKIIHLTDDSFDTDVLKA--DGAILVDFWAE----WCGPCKMIAPILDEIADEYQ------GKLTVAKLNIDQNPGTAPK 79 (222)
T ss_dssp CCCEECCTTTHHHHHTTC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHTT------TTCEEEEEETTTCTTTGGG
T ss_pred CCceeCCHHHHHHHHHhc--CCEEEEEEECC----cCHHHHHHHHHHHHHHHHhc------CCcEEEEEECCCCHHHHHH
Confidence 348999999999976543 45799999999 99999999999999999986 4599999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
|+|+++||+++|+.| +. .....|..+.+++.+|+++.+...
T Consensus 80 ~~v~~~Pt~~~~~~G-~~-----~~~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 80 YGIRGIPTLLLFKNG-EV-----AATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp GTCCSBSEEEEEETT-EE-----EEEEESCCCHHHHHHHHHHHSCCS
T ss_pred cCCCcCCEEEEEECC-eE-----EEEeccccChHHHHHHHHhhcccc
Confidence 999999999999865 32 223357789999999999988644
No 69
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.58 E-value=5.8e-15 Score=115.42 Aligned_cols=106 Identities=21% Similarity=0.287 Sum_probs=87.3
Q ss_pred CCeEEe-ChhhHHHHHHc-CCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchH
Q psy8429 46 KAVLRF-DGQKYKEYIKN-GPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (314)
Q Consensus 46 ~~VI~L-t~~nf~~~v~~-~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (314)
+.++++ |.++|++.+.. ..++..++|+|+++ ||++|+.+.|.++++++.+. ++.|+.+|++++++++
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~----~C~~C~~~~~~l~~~~~~~~-------~v~~~~v~~~~~~~~~ 72 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTAS----WCPPCKMIAPIFAELAKKFP-------NVTFLKVDVDELKAVA 72 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECS----SCHHHHHHHHHHHHHHHHCS-------SEEEEEEETTTCHHHH
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECC----CCHHHHHHHHHHHHHHHhCC-------CcEEEEEEccccHHHH
Confidence 458999 56899998853 22456799999999 99999999999999998873 5999999999999999
Q ss_pred HhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
++++++++|++++|+.| +. .....| .+.+++.++|++.+
T Consensus 73 ~~~~v~~~Pt~~~~~~G-~~-----~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 73 EEWNVEAMPTFIFLKDG-KL-----VDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp HHHHCSSTTEEEEEETT-EE-----EEEEEC-CCTTHHHHHHHHHH
T ss_pred HhCCCCcccEEEEEeCC-EE-----EEEEec-CCHHHHHHHHHHhh
Confidence 99999999999999764 32 122233 68889999998765
No 70
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.58 E-value=9.1e-15 Score=121.99 Aligned_cols=119 Identities=13% Similarity=0.104 Sum_probs=90.6
Q ss_pred ChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCCcccC
Q psy8429 52 DGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRLNTA 131 (314)
Q Consensus 52 t~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~v~sv 131 (314)
|+++|++.+.+. .+..++|.|||+ ||++|+.+.|.++++++.+. +++.|+++|++++++++++|+|+++
T Consensus 10 ~~~~~~~~i~~~-~~k~vlv~F~a~----WC~~C~~~~p~l~~l~~~~~------~~~~~~~vd~d~~~~l~~~~~v~~~ 78 (149)
T 3gix_A 10 SKKEVDQAIKST-AEKVLVLRFGRD----EDPVCLQLDDILSKTSSDLS------KMAAIYLVDVDQTAVYTQYFDISYI 78 (149)
T ss_dssp SHHHHHHHHHHC-CSSEEEEEEECT----TSHHHHHHHHHHHHHHTTTT------TTEEEEEEETTTCCHHHHHTTCCSS
T ss_pred CHHHHHHHHHhc-CCCEEEEEEECC----CCHHHHHHHHHHHHHHHHcc------CceEEEEEECCcCHHHHHHcCCCcc
Confidence 568999988522 356799999999 99999999999999998875 4599999999999999999999999
Q ss_pred ceEEEecCCCCC----CCCCccceeec-ccCHHHHHHHHHhhcC----CcceeeCCCCCc
Q psy8429 132 PIFMHFPAKGKP----KPSDTLDIQRV-GYSAEAIVKWIADRTD----IQIRVFRPPNYS 182 (314)
Q Consensus 132 Ptl~~f~p~~~~----~~~~~~~~~~~-~~~a~~l~~fI~~~~~----~~i~i~~p~~~~ 182 (314)
||+++|++|... ...+. +...| ..+.+++.+++++... -.--+..|.||+
T Consensus 79 Pt~~~~~~G~~v~~~~g~~~~-~~~~G~~~~~~~l~~~l~~~~~~~~~g~~~~~s~~~~~ 137 (149)
T 3gix_A 79 PSTVFFFNGQHMKVDYGSPDH-TKFVGSFKTKQDFIDLIEVIYRGAMRGKLIVQSPIDPK 137 (149)
T ss_dssp SEEEEEETTEEEEEECSSSCC-SCEESCCSSHHHHHHHHHHHHHHHHTTCSEEECCSCGG
T ss_pred CeEEEEECCeEEEeecCCCCC-CeEeeecCCHHHHHHHHHHHHHHhhcCCceEECCcccc
Confidence 999999886211 00011 12245 6788999999987642 112345677765
No 71
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.58 E-value=7.5e-15 Score=139.87 Aligned_cols=111 Identities=16% Similarity=0.204 Sum_probs=93.1
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhh---H---HHHHHHHHHhccccCCCCcEEEEEEECCC
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSA---S---DEYTIVANSFRYSQMYSNKLFFILVDFDE 118 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~---~---pefe~vA~s~~~~~~~~~~v~F~~vD~~~ 118 (314)
+++|++||++||++.+. + +..++|.|||+ ||++|+.. + |+|+++|+.+.. .++.|++||+++
T Consensus 12 ~~~v~~lt~~~f~~~i~-~--~~~vlV~FyAp----WC~~~~~~~~l~~~~p~~e~~a~~~~~-----~~v~~~~Vd~~~ 79 (367)
T 3us3_A 12 VDRVINVNAKNYKNVFK-K--YEVLALLYHEP----PEDDKASQRQFEMEELILELAAQVLED-----KGVGFGLVDSEK 79 (367)
T ss_dssp CCCCEECCTTTHHHHHH-H--CSEEEEEEECC----CCSSHHHHHHHHHHHHHHHHHHHHHTT-----TTEEEEEEETTT
T ss_pred CCccEECCHHHHHHHHh-h--CCeEEEEEECC----CchhHHHhhhhccccHHHHHHHHHhhc-----CCceEEEEeCcc
Confidence 46799999999999984 3 35689999999 99997433 3 899999998852 359999999999
Q ss_pred CcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCcce
Q psy8429 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQIR 174 (314)
Q Consensus 119 ~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~i~ 174 (314)
+++++++++|+++||+++|++| +. .++ .|+++++.|.+|+.++++..+.
T Consensus 80 ~~~l~~~~~V~~~PTl~~f~~G-~~-----~~y-~G~~~~~~i~~~i~~~~~~~v~ 128 (367)
T 3us3_A 80 DAAVAKKLGLTEEDSIYVFKED-EV-----IEY-DGEFSADTLVEFLLDVLEDPVE 128 (367)
T ss_dssp THHHHHHHTCCSTTEEEEEETT-EE-----EEC-CSCCSHHHHHHHHHHHHSCSEE
T ss_pred cHHHHHHcCCCcCceEEEEECC-cE-----EEe-CCCCCHHHHHHHHHHhcCCCcE
Confidence 9999999999999999999975 32 122 5889999999999999987653
No 72
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.58 E-value=6.4e-15 Score=116.03 Aligned_cols=109 Identities=24% Similarity=0.327 Sum_probs=88.5
Q ss_pred hCCCeEEe-ChhhHHHHHHcC-CCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcc
Q psy8429 44 AKKAVLRF-DGQKYKEYIKNG-PRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD 121 (314)
Q Consensus 44 ~~~~VI~L-t~~nf~~~v~~~-~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~ 121 (314)
..+.++++ ++++|++.+... .++..++++|+++ ||++|+.+.|.++++++.+. ++.|+.+|++++++
T Consensus 4 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~----~C~~C~~~~~~l~~~~~~~~-------~~~~~~v~~~~~~~ 72 (118)
T 2vm1_A 4 EEGAVIACHTKQEFDTHMANGKDTGKLVIIDFTAS----WCGPCRVIAPVFAEYAKKFP-------GAIFLKVDVDELKD 72 (118)
T ss_dssp -CCCEEECCSHHHHHHHHHHHHHHTCCEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TSEEEEEETTTSHH
T ss_pred CCCceEEecCHHHHHHHHHhcccCCCEEEEEEECC----CCHhHHHHhHHHHHHHHHCC-------CcEEEEEEcccCHH
Confidence 34568999 468999988531 1245689999999 99999999999999998873 59999999999999
Q ss_pred hHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 122 VFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 122 lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
++++++++++|++++|+.| +. ..... |.+.+++.++|++.++
T Consensus 73 ~~~~~~v~~~Pt~~~~~~g-~~-----~~~~~-g~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 73 VAEAYNVEAMPTFLFIKDG-EK-----VDSVV-GGRKDDIHTKIVALMG 114 (118)
T ss_dssp HHHHTTCCSBSEEEEEETT-EE-----EEEEE-SCCHHHHHHHHHHHHC
T ss_pred HHHHcCCCcCcEEEEEeCC-eE-----EEEec-CCCHHHHHHHHHHHhc
Confidence 9999999999999999765 32 12223 3688999999998875
No 73
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.58 E-value=3.9e-15 Score=121.54 Aligned_cols=108 Identities=12% Similarity=0.176 Sum_probs=86.9
Q ss_pred CCCeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchH
Q psy8429 45 KKAVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (314)
Q Consensus 45 ~~~VI~Lt~-~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (314)
++.++++++ ++|++.+ +..++..++|.|||+ ||++|+.+.|.++++++.+ ++.|+++|++++++++
T Consensus 19 ~~~v~~l~~~~~~~~~l-~~~~~k~vvv~F~a~----wC~~C~~~~p~l~~l~~~~--------~v~~~~vd~~~~~~l~ 85 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVF-SSTQNSSIVIKFGAV----WCKPCNKIKEYFKNQLNYY--------YVTLVDIDVDIHPKLN 85 (133)
T ss_dssp TEEEEECCCTTHHHHHH-TC-CCSEEEEEEECT----TCHHHHHTHHHHHGGGGTE--------ECEEEEEETTTCHHHH
T ss_pred CccEEEecChhHHHHHH-HhcCCCEEEEEEECC----CCHHHHHHHHHHHHHHHhc--------CEEEEEEeccchHHHH
Confidence 456999986 8898886 455566899999999 9999999999999988765 3899999999999999
Q ss_pred HhCCcccCceEEEec--CCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 124 QMLRLNTAPIFMHFP--AKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 124 ~~~~v~svPtl~~f~--p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
++|+++++||+++|+ .| +. .......| .+.+++.++|++.++
T Consensus 86 ~~~~v~~~Pt~~~~~~~~g-~g---~~~~~~~G-~~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 86 DQHNIKALPTFEFYFNLNN-EW---VLVHTVEG-ANQNDIEKAFQKYCL 129 (133)
T ss_dssp HHTTCCSSSEEEEEEEETT-EE---EEEEEEES-CCHHHHHHHHHHHSE
T ss_pred HhcCCCCCCEEEEEEecCC-Ce---EEEEEEcC-CCHHHHHHHHHHHHH
Confidence 999999999999995 43 21 01122234 489999999998865
No 74
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.58 E-value=1.1e-14 Score=114.45 Aligned_cols=100 Identities=22% Similarity=0.244 Sum_probs=82.8
Q ss_pred eEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCC
Q psy8429 48 VLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR 127 (314)
Q Consensus 48 VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~ 127 (314)
.-..|+++|++.+. . +..++|+|+|+ ||++|+.+.|.++++++.+. ++.|+.+|++++++++++++
T Consensus 9 ~~~~~~~~f~~~~~-~--~k~vlv~f~a~----wC~~C~~~~p~l~~l~~~~~-------~~~~~~vd~~~~~~l~~~~~ 74 (109)
T 3f3q_A 9 TQFKTASEFDSAIA-Q--DKLVVVDFYAT----WCGPCKMIAPMIEKFSEQYP-------QADFYKLDVDELGDVAQKNE 74 (109)
T ss_dssp EECCSHHHHHHHTT-S--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TSEEEEEETTTCHHHHHHTT
T ss_pred cCCCCHHHHHHHHh-c--CCEEEEEEECC----cCHhHHHHHHHHHHHHHHCC-------CCEEEEEECCCCHHHHHHcC
Confidence 34557789999863 3 45699999999 99999999999999999874 49999999999999999999
Q ss_pred cccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhh
Q psy8429 128 LNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 128 v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~ 168 (314)
++++|++++|+.| +. .... .|.+.+++.++|++.
T Consensus 75 v~~~Pt~~~~~~G-~~-----~~~~-~G~~~~~l~~~i~~~ 108 (109)
T 3f3q_A 75 VSAMPTLLLFKNG-KE-----VAKV-VGANPAAIKQAIAAN 108 (109)
T ss_dssp CCSSSEEEEEETT-EE-----EEEE-ESSCHHHHHHHHHHH
T ss_pred CCccCEEEEEECC-EE-----EEEE-eCCCHHHHHHHHHhh
Confidence 9999999999864 32 1222 344789999999875
No 75
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.58 E-value=3.2e-15 Score=122.12 Aligned_cols=105 Identities=8% Similarity=0.150 Sum_probs=88.1
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC--------
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF-------- 116 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~-------- 116 (314)
.+.++++|+++|++.+. + .++|+|||+ ||++|+.+.|.++++++.+ + +.|+.+|+
T Consensus 15 ~~~v~~l~~~~~~~~~~-~----~vlv~F~a~----wC~~C~~~~p~l~~l~~~~-------~-v~~~~vd~~~~~~~~~ 77 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQ-G----DAILAVYSK----TCPHCHRDWPQLIQASKEV-------D-VPIVMFIWGSLIGERE 77 (135)
T ss_dssp TTEEEECCHHHHHHHHT-S----SEEEEEEET----TCHHHHHHHHHHHHHHTTC-------C-SCEEEEEECTTCCHHH
T ss_pred cCceeecCHHHHHHHhC-C----cEEEEEECC----cCHhhhHhChhHHHHHHHC-------C-CEEEEEECCCchhhhh
Confidence 34589999999999874 2 799999999 9999999999999999876 2 88999999
Q ss_pred -CCCcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 117 -DEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 117 -~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
+++++++++|+++++||+++|+.| +. .....|..+.+.+.+++++.++.+
T Consensus 78 ~d~~~~l~~~~~v~~~Pt~~~~~~G-~~-----v~~~~G~~~~~~~~~~i~~~~~~~ 128 (135)
T 3emx_A 78 LSAARLEMNKAGVEGTPTLVFYKEG-RI-----VDKLVGATPWSLKVEKAREIYGGE 128 (135)
T ss_dssp HHHHHHHHHHHTCCSSSEEEEEETT-EE-----EEEEESCCCHHHHHHHHHHHC---
T ss_pred hhhhHHHHHHcCCceeCeEEEEcCC-EE-----EEEEeCCCCHHHHHHHHHHHhCCC
Confidence 889999999999999999999965 32 233357788999999999987643
No 76
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.57 E-value=7.9e-15 Score=117.32 Aligned_cols=106 Identities=19% Similarity=0.311 Sum_probs=87.0
Q ss_pred CCCeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchH
Q psy8429 45 KKAVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (314)
Q Consensus 45 ~~~VI~Lt~-~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (314)
...+.++++ ++|++.+ +. +..++|+|+++ ||++|+.+.|.++++++.+.. .++.|+.+|++++++++
T Consensus 14 ~~~~~~i~~~~~f~~~l-~~--~k~vvv~f~a~----~C~~C~~~~~~l~~l~~~~~~-----~~v~~~~vd~d~~~~~~ 81 (121)
T 2j23_A 14 RGSVQVISSYDQFKQVT-GG--DKVVVIDFWAT----WCGPCKMIGPVFEKISDTPAG-----DKVGFYKVDVDEQSQIA 81 (121)
T ss_dssp CCCEEECCSHHHHHHHH-SS--SSCEEEEEECT----TCSTHHHHHHHHHHHHTSTHH-----HHSEEEEEETTTCHHHH
T ss_pred CcceEEcCCHHHHHHHH-cC--CCEEEEEEECC----CCHhHHHHHHHHHHHHHHCcC-----CcEEEEEEECcCCHHHH
Confidence 345788877 8999987 33 45699999999 999999999999999988752 23999999999999999
Q ss_pred HhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
++++++++||+++|++| +. .....|. +++++.+||++.+
T Consensus 82 ~~~~v~~~Pt~~~~~~G-~~-----~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 82 QEVGIRAMPTFVFFKNG-QK-----IDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp HHHTCCSSSEEEEEETT-EE-----EEEEESS-CHHHHHHHHHHHT
T ss_pred HHcCCCcccEEEEEECC-eE-----EeeEcCC-CHHHHHHHHHHhh
Confidence 99999999999999765 32 1222344 8999999998865
No 77
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.57 E-value=1.3e-14 Score=136.86 Aligned_cols=110 Identities=13% Similarity=0.262 Sum_probs=94.0
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHH-------HHHHHHHhccccCCCCcEEEEEEECC
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDE-------YTIVANSFRYSQMYSNKLFFILVDFD 117 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pe-------fe~vA~s~~~~~~~~~~v~F~~vD~~ 117 (314)
++.|++||++||++.+. . +..++|.|||+ ||+ |+.+.|+ |+++|+.+.. .++.|++||++
T Consensus 10 ~~~v~~l~~~~f~~~i~-~--~~~~lV~F~a~----wC~-c~~~~p~~~~~~~~~~~~a~~~~~-----~~v~~~~Vd~~ 76 (350)
T 1sji_A 10 KDRVVSLTEKNFKQVLK-K--YDVLCLYYHES----VSS-DKVAQKQFQLKEIVLELVAQVLEH-----KDIGFVMVDAK 76 (350)
T ss_dssp CCCCEEECHHHHHHHHT-T--CSEEEEEEECC----SCS-SSTTSHHHHHHHHHHHHHHHHGGG-----SSEEEEEEETT
T ss_pred CCccEECCHHHHHHHHh-h--CCeEEEEEECC----CCc-chhhCchhhhhhHHHHHHHHHHhh-----cCcEEEEEeCC
Confidence 46799999999999874 3 45699999999 999 9999999 9999998862 26999999999
Q ss_pred CCcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCcce
Q psy8429 118 EGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQIR 174 (314)
Q Consensus 118 ~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~i~ 174 (314)
++++++++++|+++||+++|++| +. .++ .|+++++++.+|+.++++..+.
T Consensus 77 ~~~~l~~~~~v~~~Pt~~~~~~g-~~-----~~~-~G~~~~~~l~~~i~~~~~~~~~ 126 (350)
T 1sji_A 77 KEAKLAKKLGFDEEGSLYVLKGD-RT-----IEF-DGEFAADVLVEFLLDLIEDPVE 126 (350)
T ss_dssp TTHHHHHHHTCCSTTEEEEEETT-EE-----EEE-CSCCCHHHHHHHHHTTSSCSEE
T ss_pred CCHHHHHhcCCCccceEEEEECC-cE-----EEe-cCCCCHHHHHHHHHHhcCCcce
Confidence 99999999999999999999876 32 122 5789999999999999986653
No 78
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.57 E-value=4.7e-15 Score=118.96 Aligned_cols=112 Identities=14% Similarity=0.222 Sum_probs=89.2
Q ss_pred CCeEEeChhhHH--HHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEE--CCCCcc
Q psy8429 46 KAVLRFDGQKYK--EYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVD--FDEGSD 121 (314)
Q Consensus 46 ~~VI~Lt~~nf~--~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD--~~~~~~ 121 (314)
.++.+++.++|+ +......++..++|+|+|+ ||++|+.+.|+++++++.+. +++.|+.+| ++++++
T Consensus 4 ~~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~----wC~~C~~~~~~l~~~~~~~~------~~v~~~~v~~~~d~~~~ 73 (126)
T 2l57_A 4 EGIKQINFQSINVVENLEEAKEGIPTIIMFKTD----TCPYCVEMQKELSYVSKERE------GKFNIYYARLEEEKNID 73 (126)
T ss_dssp CCSSCTTTTCCSEESSTTTCCSSSCEEEEEECS----SCHHHHHHHHHHHHHHHHSS------SSCEEEEEETTSSHHHH
T ss_pred cccCCCCccccchhHHHHHHhCCCcEEEEEECC----CCccHHHHHHHHHHHHHHhc------CCeEEEEEeCCCCchHH
Confidence 346677777776 0001123455799999999 99999999999999999885 469999999 999999
Q ss_pred hHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 122 VFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 122 lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
++++|+++++|++++|.++|+. .....|..+.+++.++|+++.+.+
T Consensus 74 ~~~~~~v~~~Pt~~~~~~~G~~-----~~~~~G~~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 74 LAYKYDANIVPTTVFLDKEGNK-----FYVHQGLMRKNNIETILNSLGVKE 119 (126)
T ss_dssp HHHHTTCCSSSEEEEECTTCCE-----EEEEESCCCHHHHHHHHHHHCCCC
T ss_pred HHHHcCCcceeEEEEECCCCCE-----EEEecCCCCHHHHHHHHHHHhccc
Confidence 9999999999999999965543 122246788999999999998754
No 79
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.56 E-value=1.5e-14 Score=131.00 Aligned_cols=111 Identities=11% Similarity=0.199 Sum_probs=89.6
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEe--eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC----
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFT--ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE---- 118 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~Ft--A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~---- 118 (314)
.++|++||++||++.+ ++ +.+++|.|| |+ ||+ +.|+|+++|+.+... .+++.|++||+++
T Consensus 15 ~~~v~~Lt~~nF~~vi-~~--~~~vlV~Fy~~Ap----WCg----l~P~~e~lA~~~~~~---~~~v~~akVD~d~~g~~ 80 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTV-ER--FPYSVVKFDIASP----YGE----KHEAFTAFSKSAHKA---TKDLLIATVGVKDYGEL 80 (248)
T ss_dssp CTTCEECCTTTHHHHH-TT--SSEEEEEEEESSC----CSH----HHHHHHHHHHHHHHH---CSSEEEEEEEECSSTTC
T ss_pred CCCcEECCHHHHHHHH-hc--CCCEEEEEECCCC----CCc----cHHHHHHHHHHHhcc---CCCeEEEEEECCccccc
Confidence 4569999999999965 33 457999999 99 998 999999999998520 1469999999999
Q ss_pred -CcchHHhCCcc--cCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 119 -GSDVFQMLRLN--TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 119 -~~~lf~~~~v~--svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
+++++++|+|+ ++||+++|+ | +......|+. .|+++.++|.+||+++++..
T Consensus 81 ~n~~la~~~~V~~~~~PTl~~F~-G-~~~~~~~y~~-~G~~~~~~L~~fi~~~~~~~ 134 (248)
T 2c0g_A 81 ENKALGDRYKVDDKNFPSIFLFK-G-NADEYVQLPS-HVDVTLDNLKAFVSANTPLY 134 (248)
T ss_dssp TTHHHHHHTTCCTTSCCEEEEES-S-SSSSEEECCT-TSCCCHHHHHHHHHHHSSCC
T ss_pred ccHHHHHHhCCCcCCCCeEEEEe-C-CcCcceeecc-cCCCCHHHHHHHHHHhhccc
Confidence 89999999999 999999999 6 3211122211 47899999999999998844
No 80
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.55 E-value=2e-14 Score=118.93 Aligned_cols=119 Identities=18% Similarity=0.200 Sum_probs=88.1
Q ss_pred ChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCCcccC
Q psy8429 52 DGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRLNTA 131 (314)
Q Consensus 52 t~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~v~sv 131 (314)
|+++|++.+.+ ..+..++|.|||+ ||++|+.+.|.++++++.+. +++.|+++|++++++++++++|+++
T Consensus 10 ~~~~~~~~v~~-~~~k~vlv~F~a~----wC~~C~~~~p~l~~l~~~~~------~~v~~~~vd~d~~~~~~~~~~i~~~ 78 (142)
T 1qgv_A 10 NGWQVDQAILS-EEDRVVVIRFGHD----WDPTCMKMDEVLYSIAEKVK------NFAVIYLVDITEVPDFNKMYELYDP 78 (142)
T ss_dssp SHHHHHHHHHT-CSSSEEEEEEECT----TSHHHHHHHHHHHHHHHHHT------TTEEEEEEETTTCCTTTTSSCSCSS
T ss_pred CHHHHHHHHHh-cCCCEEEEEEECC----CCHHHHHHHHHHHHHHHHhC------CCeEEEEEccccCHHHHHHcCCCCC
Confidence 46889987753 1256799999999 99999999999999999885 4699999999999999999999999
Q ss_pred ceEEEecCCCCCC----CCCccceeeccc-CHHHHHHHHHhhcC----CcceeeCCCCCc
Q psy8429 132 PIFMHFPAKGKPK----PSDTLDIQRVGY-SAEAIVKWIADRTD----IQIRVFRPPNYS 182 (314)
Q Consensus 132 Ptl~~f~p~~~~~----~~~~~~~~~~~~-~a~~l~~fI~~~~~----~~i~i~~p~~~~ 182 (314)
||+++|++|.... ..+...+ .+.. +.+++.++|++... -.--+..|.+|+
T Consensus 79 Pt~~~~~~G~~v~~~~g~~~~~~~-~g~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~ 137 (142)
T 1qgv_A 79 CTVMFFFRNKHIMIDLGTGNNNKI-NWAMEDKQEMVDIIETVYRGARKGRGLVVSPKDYS 137 (142)
T ss_dssp CEEEEEETTEEEEEECC------C-CSCCSCHHHHHHHHHHHHHHHTTTCSEEECCCCCC
T ss_pred CEEEEEECCcEEEEecCCCCccee-eeecCcHHHHHHHHHHHHHHHhcCCeEEeCCCCcc
Confidence 9999998762210 0000111 2334 48889998877543 122345666765
No 81
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.55 E-value=1.1e-14 Score=118.75 Aligned_cols=108 Identities=17% Similarity=0.257 Sum_probs=87.6
Q ss_pred CCeEEeC-hhhHHHHHHcC-CCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchH
Q psy8429 46 KAVLRFD-GQKYKEYIKNG-PRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (314)
Q Consensus 46 ~~VI~Lt-~~nf~~~v~~~-~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (314)
+++++++ +++|++.+... .++..++|+|||+ ||++|+.+.|.++++++.+. ++.|+.+|++++++++
T Consensus 24 ~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~----wC~~C~~~~~~l~~l~~~~~-------~v~~~~v~~~~~~~~~ 92 (139)
T 3d22_A 24 GNVHLITTKERWDQKLSEASRDGKIVLANFSAR----WCGPSRQIAPYYIELSENYP-------SLMFLVIDVDELSDFS 92 (139)
T ss_dssp TTCEEECSHHHHHHHHHHHHHHTCCEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TSEEEEEETTTSHHHH
T ss_pred CcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECC----CCHHHHHHHHHHHHHHHHCC-------CCEEEEEeCcccHHHH
Confidence 4588886 68999987421 1245699999999 99999999999999998873 5999999999999999
Q ss_pred HhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCC
Q psy8429 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~ 171 (314)
++|+++++||+++|+.| +. .....|. +.+++.++|++.++.
T Consensus 93 ~~~~v~~~Pt~~~~~~G-~~-----~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 93 ASWEIKATPTFFFLRDG-QQ-----VDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp HHTTCCEESEEEEEETT-EE-----EEEEESC-CHHHHHHHHHHHHHT
T ss_pred HHcCCCcccEEEEEcCC-eE-----EEEEeCC-CHHHHHHHHHHHhcc
Confidence 99999999999999654 32 1222344 889999999988753
No 82
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.54 E-value=2.2e-14 Score=112.83 Aligned_cols=101 Identities=13% Similarity=0.120 Sum_probs=81.7
Q ss_pred EEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCCc
Q psy8429 49 LRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRL 128 (314)
Q Consensus 49 I~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~v 128 (314)
..+|+++| +.+. . +..++|+|+|+ ||++|+.+.|.++++++.+. ++.|+++|+++++++++++++
T Consensus 6 ~~~~~~~f-~~~~-~--~~~~vv~f~a~----wC~~C~~~~~~l~~~~~~~~-------~v~~~~vd~~~~~~l~~~~~v 70 (110)
T 2l6c_A 6 DITTEAGM-AHFE-G--LSDAIVFFHKN----LCPHCKNMEKVLDKFGARAP-------QVAISSVDSEARPELMKELGF 70 (110)
T ss_dssp BCGGGCSH-HHHT-T--CSEEEEEEECS----SCSTHHHHHHHHHHHHTTCT-------TSCEEEEEGGGCHHHHHHTTC
T ss_pred ecCCHHHH-HHHH-c--CCCEEEEEECC----CCHhHHHHHHHHHHHHHHCC-------CcEEEEEcCcCCHHHHHHcCC
Confidence 45678999 5543 2 34589999999 99999999999999998763 589999999999999999999
Q ss_pred ccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 129 NTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 129 ~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
+++|++++|+.| +. .....|..+.++|.+++++..+
T Consensus 71 ~~~Pt~~~~~~G-~~-----v~~~~G~~~~~~l~~~~~~~~~ 106 (110)
T 2l6c_A 71 ERVPTLVFIRDG-KV-----AKVFSGIMNPRELQALYASIHH 106 (110)
T ss_dssp CSSCEEEEEESS-SE-----EEEEESCCCHHHHHHHHHTC--
T ss_pred cccCEEEEEECC-EE-----EEEEcCCCCHHHHHHHHHHHhh
Confidence 999999999665 32 2222466799999999988754
No 83
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.53 E-value=3.4e-14 Score=115.99 Aligned_cols=104 Identities=19% Similarity=0.224 Sum_probs=87.5
Q ss_pred eEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCC
Q psy8429 48 VLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR 127 (314)
Q Consensus 48 VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~ 127 (314)
|+++|++||++++ ++ +.+++++|+|+ |++|+++.|.++++|+.|. +++.|+++|.++++++.++||
T Consensus 8 v~~~t~~~f~~~~-~~--~~pv~v~f~a~-----~~~c~~~~p~l~~~A~~~~------gk~~f~~vd~d~~~~~a~~~g 73 (133)
T 2djk_A 8 IGEIGPETYSDYM-SA--GIPLAYIFAET-----AEERKELSDKLKPIAEAQR------GVINFGTIDAKAFGAHAGNLN 73 (133)
T ss_dssp SEECCHHHHHHHH-HT--TSCEEEEECSC-----SSSHHHHHHHHHHHHHSST------TTSEEEEECTTTTGGGTTTTT
T ss_pred eeccChHHHHHHh-cC--CCCEEEEEecC-----hhhHHHHHHHHHHHHHHhC------CeEEEEEEchHHhHHHHHHcC
Confidence 7899999999985 34 45699999996 6899999999999999986 579999999999999999999
Q ss_pred ccc--CceEEEecC-CCCCCCCCccce-eecccCHHHHHHHHHhhcC
Q psy8429 128 LNT--APIFMHFPA-KGKPKPSDTLDI-QRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 128 v~s--vPtl~~f~p-~~~~~~~~~~~~-~~~~~~a~~l~~fI~~~~~ 170 (314)
|++ +|++++|.. +++ .|.. ..+..+.+++.+|+++.+.
T Consensus 74 i~~~~iPtl~i~~~~~g~-----~~~~~~~g~~~~~~l~~fi~~~l~ 115 (133)
T 2djk_A 74 LKTDKFPAFAIQEVAKNQ-----KFPFDQEKEITFEAIKAFVDDFVA 115 (133)
T ss_dssp CCSSSSSEEEEECTTTCC-----BCCCCSSSCCCHHHHHHHHHHHHH
T ss_pred CCcccCCEEEEEecCcCc-----ccCCCCccccCHHHHHHHHHHHHc
Confidence 999 999999986 222 1322 1267789999999998774
No 84
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.53 E-value=4.4e-14 Score=127.45 Aligned_cols=107 Identities=18% Similarity=0.277 Sum_probs=87.8
Q ss_pred hCCCeEEeChhhHHHHHHcCCCCccEEEEEee--CCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC---
Q psy8429 44 AKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTA--LAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE--- 118 (314)
Q Consensus 44 ~~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA--~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~--- 118 (314)
..++|++||++||++.+. . +.+++|.||| + ||+ +.|+|+++|+.+.. .+++.|++||+++
T Consensus 3 ~~~~v~~Lt~~nF~~~i~-~--~~~vlV~FyA~~p----WCg----l~P~~e~lA~~~~~----~~~v~~akVDvd~~g~ 67 (240)
T 2qc7_A 3 HTKGALPLDTVTFYKVIP-K--SKFVLVKFDTQYP----YGE----KQDEFKRLAENSAS----SDDLLVAEVGISDYGD 67 (240)
T ss_dssp CCTTCEECCTTHHHHHGG-G--CSEEEEEECCSSC----CSH----HHHHHHHHHHHHTT----CTTEEEEEECCCCSSS
T ss_pred CCCCceECCHHHHHHHHc-C--CCCEEEEEeCCCC----CCc----chHHHHHHHHHhcC----CCCeEEEEEeCCcccc
Confidence 346799999999999763 3 3579999999 9 998 99999999999852 2469999999654
Q ss_pred --CcchHHhCCcc--cCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 119 --GSDVFQMLRLN--TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 119 --~~~lf~~~~v~--svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
+++++++|+|+ ++||+++|++| +..... .+ .|++++++|.+||++++
T Consensus 68 ~~~~~l~~~~~V~~~~~PTl~~f~~G-~~~~~~--~y-~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 68 KLNMELSEKYKLDKESYPVFYLFRDG-DFENPV--PY-TGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp CCSHHHHHHTTCCGGGCSEEEEEETT-CSSCCE--EC-CSCSCHHHHHHHHHHTT
T ss_pred hhhHHHHHHcCCCCCCCCEEEEEeCC-CcCcce--ee-cCCCCHHHHHHHHHHhc
Confidence 89999999999 99999999986 311112 22 47889999999999986
No 85
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.53 E-value=7.2e-14 Score=131.80 Aligned_cols=109 Identities=13% Similarity=0.293 Sum_probs=90.0
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
++|..+++++|++.+.+. +..++|+|||+ ||++|+.+.|+|+++|+.+.. ..++.|+++|++++. +++
T Consensus 249 ~~v~~l~~~~f~~~~~~~--~k~~lv~f~a~----wC~~C~~~~p~~~~la~~~~~----~~~v~~~~vd~~~~~--~~~ 316 (361)
T 3uem_A 249 QPVKVLVGKNFEDVAFDE--KKNVFVEFYAP----WCGHCKQLAPIWDKLGETYKD----HENIVIAKMDSTANE--VEA 316 (361)
T ss_dssp SSSEEECTTTHHHHHTCT--TCEEEEEEECT----TCHHHHHHHHHHHHHHHHTTT----CSSEEEEEEETTTCB--CSS
T ss_pred CCcEEeecCchhhhcccC--CCcEEEEEecC----cCHhHHHHHHHHHHHHHHhcc----CCcEEEEEEECCccc--hhh
Confidence 358999999999998533 45799999999 999999999999999999863 236999999999987 689
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
++|+++||+++|+++++. .. ..+ .|.++.++|.+||+++.+
T Consensus 317 ~~v~~~Pt~~~~~~~~~~-~~--~~~-~G~~~~~~l~~~l~~~~~ 357 (361)
T 3uem_A 317 VKVHSFPTLKFFPASADR-TV--IDY-NGERTLDGFKKFLESGGQ 357 (361)
T ss_dssp CCCCSSSEEEEECSSSSC-CC--EEC-CSCSSHHHHHHHHTTTSC
T ss_pred cCCcccCeEEEEECCCCc-ce--eEe-cCCCCHHHHHHHHHhcCC
Confidence 999999999999876321 11 222 578999999999998754
No 86
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.53 E-value=7.2e-14 Score=111.40 Aligned_cols=110 Identities=21% Similarity=0.270 Sum_probs=85.6
Q ss_pred CCeEEe--ChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchH
Q psy8429 46 KAVLRF--DGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (314)
Q Consensus 46 ~~VI~L--t~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (314)
+.++++ +.++|++.+.+. +..++|+|+|+ ||++|+.+.|.++++++.+ +++.|+++|++++++++
T Consensus 3 ~~v~~~~g~~~~~~~~~~~~--~~~vlv~f~a~----wC~~C~~~~~~l~~l~~~~-------~~v~~~~vd~~~~~~~~ 69 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIKEA--PGLVLVDFFAT----WCGPCQRLGQILPSIAEAN-------KDVTFIKVDVDKNGNAA 69 (118)
T ss_dssp CCSEEECSCHHHHHHHHHHC--SSCEEEEEECT----TCHHHHHHHHHHHHHHHHC-------TTSEEEEEETTTCHHHH
T ss_pred CcceEecCCHHHHHHHHHhC--CCEEEEEEECC----CCHHHHHHHHHHHHHHHHC-------CCeEEEEEECCCCHHHH
Confidence 457888 578998666433 45699999999 9999999999999999887 25999999999999999
Q ss_pred HhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCC
Q psy8429 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~ 171 (314)
++++++++|++++|+++++. ...... ..|...+++.+.+.++...
T Consensus 70 ~~~~i~~~Pt~~~~~~~~~~--G~~~~~-~~G~~~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 70 DAYGVSSIPALFFVKKEGNE--IKTLDQ-FVGADVSRIKADIEKFKHH 114 (118)
T ss_dssp HHTTCCSSSEEEEEEEETTE--EEEEEE-EESCCHHHHHHHHHHHC--
T ss_pred HhcCCCCCCEEEEEeCCCCc--ceEEEe-ecCCCHHHHHHHHHHhhhc
Confidence 99999999999999872111 011222 2456677899999887653
No 87
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.52 E-value=2.5e-14 Score=115.35 Aligned_cols=88 Identities=17% Similarity=0.352 Sum_probs=75.8
Q ss_pred CCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCCcccCceEEEecCCCCCC
Q psy8429 65 RNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPK 144 (314)
Q Consensus 65 r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~v~svPtl~~f~p~~~~~ 144 (314)
++..++|.|||+ ||++|+++.|+++++++.+. +++.|+.+|++++++++++++++++||+++|+.| +.
T Consensus 41 ~~k~vlv~F~a~----wC~~C~~~~p~l~~~~~~~~------~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G-~~- 108 (128)
T 3ul3_B 41 KNTVIVLYFFAK----WCQACTMQSTEMDKLQKYYG------KRIYLLKVDLDKNESLARKFSVKSLPTIILLKNK-TM- 108 (128)
T ss_dssp CCSEEEEEEECT----TCHHHHHHHHHHHHHHHHHG------GGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETT-EE-
T ss_pred cCCEEEEEEECC----CCHHHHHHhHHHHHHHHHhc------CCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECC-EE-
Confidence 356799999999 99999999999999999986 4699999999999999999999999999999765 32
Q ss_pred CCCccceeecccCHHHHHHHHHhh
Q psy8429 145 PSDTLDIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 145 ~~~~~~~~~~~~~a~~l~~fI~~~ 168 (314)
.....|..+.+++.+||+++
T Consensus 109 ----~~~~~G~~~~~~l~~~l~~~ 128 (128)
T 3ul3_B 109 ----LARKDHFVSSNDLIALIKKH 128 (128)
T ss_dssp ----EEEESSCCCHHHHHHHHTTC
T ss_pred ----EEEecCCCCHHHHHHHHHhC
Confidence 22335678999999999763
No 88
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.28 E-value=8e-16 Score=118.28 Aligned_cols=104 Identities=16% Similarity=0.257 Sum_probs=85.9
Q ss_pred CeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhC
Q psy8429 47 AVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (314)
Q Consensus 47 ~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~ 126 (314)
+++++|+++|++.+.++ +..++++|+++ ||++|+.+.|.++++++.+. +++.|+.+|+++++++++++
T Consensus 2 ~v~~l~~~~~~~~~~~~--~~~~~v~f~~~----~C~~C~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~~ 69 (106)
T 2yj7_A 2 SVIEVTDENFEQEVLKS--DKPVLVDFWAP----WCGPCRMIAPIIEELAKEYE------GKVKVVKVNVDENPNTAAQY 69 (106)
Confidence 36889999999876433 45689999999 99999999999999998875 36999999999999999999
Q ss_pred CcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhh
Q psy8429 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 127 ~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~ 168 (314)
+++++|++++|+.| +.. ....|..+.+++.+|+++.
T Consensus 70 ~v~~~Pt~~~~~~g-~~~-----~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 70 GIRSIPTLLLFKNG-QVV-----DRLVGAQPKEALKERIDKH 105 (106)
Confidence 99999999999654 321 1224666788999998764
No 89
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.51 E-value=6.9e-14 Score=139.25 Aligned_cols=118 Identities=15% Similarity=0.200 Sum_probs=95.8
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC--Ccch
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE--GSDV 122 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~--~~~l 122 (314)
.+.|+++|+++|++.+.++ +..++|.|||+ ||++|+++.|+|+++|+.+.. ..+.+.|+++|+++ ++++
T Consensus 11 ~~~V~~Lt~~~f~~~v~~~--~k~vlV~FyA~----WC~pCk~~~P~l~~la~~~~~---~~~~v~~~~VD~d~d~~~~l 81 (519)
T 3t58_A 11 SDPLTLLDADSVRPTVLGS--SSAWAVEFFAS----WCGHAIAFAPTWKELANDVKD---WRPALNLAVLDCAEETNSAV 81 (519)
T ss_dssp TSSSEEECTTTHHHHHSSC--SSEEEEEEECT----TSHHHHHHHHHHHHHHHHHGG---GTTTEEEEEEETTSGGGHHH
T ss_pred CCCcEECChHHHHHHHHhC--CCeEEEEEECC----CCHHHHHHHHHHHHHHHHhhC---cCCcEEEEEEECCccccHHH
Confidence 4569999999999987533 45799999999 999999999999999999862 12369999999964 8999
Q ss_pred HHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCcc
Q psy8429 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (314)
Q Consensus 123 f~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~i 173 (314)
+++|+|+++||+++|++|.+.. .......++.+.+++.++|.+.++.+.
T Consensus 82 ~~~~~V~~~PTl~~f~~g~~~G--~~~~~~~g~~~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 82 CREFNIAGFPTVRFFQAFTKNG--SGATLPGAGANVQTLRMRLIDALESHR 130 (519)
T ss_dssp HHHTTCCSBSEEEEECTTCCSC--CCEEECCSSCCHHHHHHHHHHHHTTCC
T ss_pred HHHcCCcccCEEEEEcCcccCC--CceeEecCCCCHHHHHHHHHHHHhhcc
Confidence 9999999999999999863211 122233567899999999999887543
No 90
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.51 E-value=3.8e-14 Score=125.86 Aligned_cols=109 Identities=9% Similarity=0.142 Sum_probs=86.0
Q ss_pred CeEEe-ChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 47 AVLRF-DGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 47 ~VI~L-t~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
.|+++ +.++|++.+.+.+++..++|.|||+ ||++|+.+.|.++++|+.+. .+.|+++|++ +++++++
T Consensus 100 ~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~----wC~~C~~l~p~l~~la~~~~-------~v~f~~vd~~-~~~l~~~ 167 (217)
T 2trc_P 100 FVYELETGEQFLETIEKEQKVTTIVVNIYED----GVRGCDALNSSLECLAAEYP-------MVKFCKIRAS-NTGAGDR 167 (217)
T ss_dssp SEEECCSHHHHHHHHHHSCTTCEEEEEEECT----TSTTHHHHHHHHHHHHTTCT-------TSEEEEEEHH-HHTCSTT
T ss_pred eEEEcCCHHHHHHHHHhcCCCcEEEEEEECC----CCccHHHHHHHHHHHHHHCC-------CeEEEEEECC-cHHHHHH
Confidence 38899 8899999986555567899999999 99999999999999998873 5999999999 8899999
Q ss_pred CCcccCceEEEecCCCCCC-CCCccc-eeecccCHHHHHHHHHhh
Q psy8429 126 LRLNTAPIFMHFPAKGKPK-PSDTLD-IQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~-~~~~~~-~~~~~~~a~~l~~fI~~~ 168 (314)
|+++++||+++|+.| +.. ....+. ......+.++|.+||.++
T Consensus 168 ~~i~~~PTl~~~~~G-~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 168 FSSDVLPTLLVYKGG-ELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp SCGGGCSEEEEEETT-EEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEECC-EEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 999999999999875 321 000000 000123469999999876
No 91
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.51 E-value=5.3e-14 Score=111.61 Aligned_cols=99 Identities=19% Similarity=0.301 Sum_probs=80.4
Q ss_pred eEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhC
Q psy8429 48 VLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (314)
Q Consensus 48 VI~Lt~-~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~ 126 (314)
+.++++ ++|++.+. . +..++|+|+|+ ||++|+++.|.++++++.+. + +.|+.+|+++++++++++
T Consensus 14 ~~~~~~~~~~~~~~~-~--~k~vvv~F~a~----wC~~C~~~~p~l~~~~~~~~------~-v~~~~vd~~~~~~l~~~~ 79 (114)
T 2oe3_A 14 ITKLTNLTEFRNLIK-Q--NDKLVIDFYAT----WCGPCKMMQPHLTKLIQAYP------D-VRFVKCDVDESPDIAKEC 79 (114)
T ss_dssp SCBCCSHHHHHHHHH-H--CSEEEEEEECT----TCHHHHHTHHHHHHHHHHCT------T-SEEEEEETTTCHHHHHHT
T ss_pred eeecCCHHHHHHHHh-C--CCEEEEEEECC----CCHHHHHHHHHHHHHHHHCC------C-CEEEEEECCCCHHHHHHC
Confidence 667766 56777654 2 34689999999 99999999999999999874 3 999999999999999999
Q ss_pred CcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHh
Q psy8429 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIAD 167 (314)
Q Consensus 127 ~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~ 167 (314)
+++++|++++|+.| +. .....|.. .+++.++|++
T Consensus 80 ~v~~~Pt~~~~~~G-~~-----~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 80 EVTAMPTFVLGKDG-QL-----IGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp TCCSBSEEEEEETT-EE-----EEEEESSC-HHHHHHHHHT
T ss_pred CCCcccEEEEEeCC-eE-----EEEEeCCC-HHHHHHHHHh
Confidence 99999999999765 32 12224545 8999999875
No 92
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.50 E-value=6.5e-14 Score=145.13 Aligned_cols=110 Identities=11% Similarity=0.135 Sum_probs=87.4
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
+.|++||+++|++.+. . +..++|+|||+ ||++|+++.|+|+++|+.+. +.+.|++||++++++++++
T Consensus 116 ~~v~~l~~~~f~~~i~-~--~~~~lv~Fya~----wC~~C~~~~p~~~~~a~~~~------~~v~~~~vd~~~~~~l~~~ 182 (780)
T 3apo_A 116 PEIITLERREFDAAVN-S--GELWFVNFYSP----GSSHSHDLAPTWREFAKEVD------GLLRIGAVNCGDDRMLCRM 182 (780)
T ss_dssp TTEEECCHHHHHHHHT-S--SSCEEEEEECS----SCHHHHHHHHHHHHHHHHTT------TTSEEEEEETTTCSSCC--
T ss_pred cceeeechHhHHhhhc-C--CCcEEEEEeCC----CCcchhHhhHHHHHHHHHhc------CceEEEEEeCCCcHHHHHH
Confidence 4699999999999983 3 45799999999 99999999999999999985 4599999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCcce
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQIR 174 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~i~ 174 (314)
++|+++||+++|++|... ..| .|.++++.|.+|+.++++..+.
T Consensus 183 ~~v~~~Pt~~~~~~g~~~---~~~---~G~~~~~~l~~~l~~~~~~~~~ 225 (780)
T 3apo_A 183 KGVNSYPSLFIFRSGMAA---VKY---NGDRSKESLVAFAMQHVRSTVT 225 (780)
T ss_dssp ------CEEEEECTTSCC---EEC---CSCSCHHHHHHHHHTTSCCCEE
T ss_pred cCCceeeeEEEEeCCcEe---eEe---cCCCCHHHHHHHHHHhchhhhe
Confidence 999999999999886321 122 5788999999999999987654
No 93
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.50 E-value=1.7e-14 Score=114.43 Aligned_cols=104 Identities=14% Similarity=0.138 Sum_probs=80.6
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC----CCCc
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF----DEGS 120 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~----~~~~ 120 (314)
..++..+|.++|++.+.++ ..++|+|+|+ ||++|+.+.|.++++++.+. .++.++.+|- ++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~---~~~~v~f~a~----wC~~C~~~~p~l~~~~~~~~------~~v~~~~~~~~~~~~~~~ 77 (118)
T 1zma_A 11 IKDLEVTTVVRAQEALDKK---ETATFFIGRK----TCPYCRKFAGTLSGVVAETK------AHIYFINSEEPSQLNDLQ 77 (118)
T ss_dssp TTTSEECCHHHHHHHHHTT---CCEEEEEECT----TCHHHHHHHHHHHHHHHHHC------CCCEEEETTCGGGHHHHH
T ss_pred HhhhhcCCHHHHHHHHhCC---CeEEEEEECC----CCccHHHHHHHHHHHHHhcC------CeEEEEECCCcCcHHHHH
Confidence 3568899999999987532 3689999999 99999999999999998764 3566663332 2346
Q ss_pred chHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHh
Q psy8429 121 DVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIAD 167 (314)
Q Consensus 121 ~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~ 167 (314)
++.++++|+++||+++|++| +. .....|..+.+++.+||++
T Consensus 78 ~~~~~~~i~~~Pt~~~~~~G-~~-----~~~~~G~~~~~~l~~~l~k 118 (118)
T 1zma_A 78 AFRSRYGIPTVPGFVHITDG-QI-----NVRCDSSMSAQEIKDFAGL 118 (118)
T ss_dssp HHHHHHTCCSSCEEEEEETT-EE-----EEECCTTCCHHHHHHHHTC
T ss_pred HHHHHcCCCCCCeEEEEECC-EE-----EEEecCCCCHHHHHHHhhC
Confidence 88899999999999999865 32 1222467789999999853
No 94
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.50 E-value=1.8e-13 Score=141.85 Aligned_cols=133 Identities=13% Similarity=0.106 Sum_probs=108.7
Q ss_pred CCchHHHHHHHHhhhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCc
Q psy8429 29 SLSLGDRVLHLSEMNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNK 108 (314)
Q Consensus 29 ~~~~~~~~~~L~~l~~~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~ 108 (314)
|....+.+.++.+-...++|.+|++++|++++.+.+++..++|.|+|+ ||++|+++.|+|+++|+.+. ++
T Consensus 526 g~~~~~~l~~fi~~~~~~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap----~C~~c~~~~p~~~~lA~~~~------~~ 595 (780)
T 3apo_A 526 GHHSAEQILEFIEDLRNPSVVSLTPSTFNELVKQRKHDEVWMVDFYSP----WSHPSQVLMPEWKRMARTLT------GL 595 (780)
T ss_dssp SCSCHHHHHHHHHHHHSCSEEECCHHHHHHHTTTCCTTCCEEEEEECT----TCHHHHHHHHHHHHHHHHHT------TT
T ss_pred CcccHHHHHHHHHhhcccceeecCcccHHHHhhccCCCCeEEEEEECC----CCHHHHHhhHHHHHHHHHhh------CC
Confidence 555667777776666678899999999999986555567789999999 99999999999999999986 46
Q ss_pred EEEEEEECCCCcchHHhCCcccCceEEEecCCCCCCCCCccceeec-ccCHHHHHHHHHhhcCCcc
Q psy8429 109 LFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRV-GYSAEAIVKWIADRTDIQI 173 (314)
Q Consensus 109 v~F~~vD~~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~-~~~a~~l~~fI~~~~~~~i 173 (314)
+.|+++|+++++.++++++++++|++.+|+++.+.. .....+ .| .++.+.|.+|+.+.+...+
T Consensus 596 v~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~-~~~~~y-~g~~~~~~~l~~fi~~~~~~~v 659 (780)
T 3apo_A 596 INVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKA-YQYHSY-NGWNRDAYSLRSWGLGFLPQAS 659 (780)
T ss_dssp SEEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSC-CSCEEC-CCSCCSHHHHHHHHHTTSCCCS
T ss_pred eEEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCc-cchhhc-CCCCCCHHHHHHHHhhhccccc
Confidence 999999999999999999999999999999863211 111122 45 7899999999999876443
No 95
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.50 E-value=1.3e-13 Score=110.65 Aligned_cols=106 Identities=14% Similarity=0.191 Sum_probs=85.8
Q ss_pred eEEeChhhHHHHHHcCCCCccEEEEEeeC---CCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC-------C
Q psy8429 48 VLRFDGQKYKEYIKNGPRNYSAIVMFTAL---APQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF-------D 117 (314)
Q Consensus 48 VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~---~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~-------~ 117 (314)
+...+.++|++.+.+ .++..++|.|+|+ +.+.||++|+.+.|.++++++.+. +++.|+++|+ +
T Consensus 7 v~~~~~~~~~~~~~~-~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~------~~~~~~~vd~~~~~~~~d 79 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQ-HNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHIS------EGCVFIYCQVGEKPYWKD 79 (123)
T ss_dssp EEEESHHHHHHHHHT-TTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCC------TTEEEEEEECCCHHHHHC
T ss_pred EEeccHHHHHHHHHH-hCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcC------CCcEEEEEECCCchhhhc
Confidence 556688999998853 2366799999998 456799999999999999998874 4699999999 7
Q ss_pred CCcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHh
Q psy8429 118 EGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIAD 167 (314)
Q Consensus 118 ~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~ 167 (314)
+++++.++++++++||+++|.++++. .- ..+.+++.+.+|+++
T Consensus 80 ~~~~~~~~~~i~~~Pt~~~~~~~~~~------~g-~~~~~~~~l~~~i~~ 122 (123)
T 1wou_A 80 PNNDFRKNLKVTAVPTLLKYGTPQKL------VE-SECLQANLVEMLFSE 122 (123)
T ss_dssp TTCHHHHHHCCCSSSEEEETTSSCEE------EG-GGGGCHHHHHHHHHC
T ss_pred hhHHHHHHCCCCeeCEEEEEcCCceE------ec-cccCCHHHHHHHHhc
Confidence 89999999999999999999874221 10 134678899999864
No 96
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.50 E-value=5.4e-14 Score=127.23 Aligned_cols=124 Identities=8% Similarity=0.106 Sum_probs=93.2
Q ss_pred HHHHHHHhhhhC----CCeEEe-ChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCc
Q psy8429 34 DRVLHLSEMNAK----KAVLRF-DGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNK 108 (314)
Q Consensus 34 ~~~~~L~~l~~~----~~VI~L-t~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~ 108 (314)
.+++++.+.+.+ ..|+++ +.++|.+.+.+.+++..++|.|||+ ||++|+.+.|.++++|+.|. .
T Consensus 96 ~Rl~el~~~~~~~~~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~----wC~~Ck~l~p~l~~La~~~~-------~ 164 (245)
T 1a0r_P 96 QCMQDMHQKLSFGPRYGFVYELESGEQFLETIEKEQKITTIVVHIYED----GIKGCDALNSSLICLAAEYP-------M 164 (245)
T ss_dssp HHHHHHHHHHCCCCCCCSEEECCSHHHHHHHHHSSCTTCEEEEEEECT----TSTTHHHHHHHHHHHHHHCT-------T
T ss_pred HHHHHHHHHhhccCCCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECC----CChHHHHHHHHHHHHHHHCC-------C
Confidence 455555543321 248899 7899999986544567899999999 99999999999999999874 4
Q ss_pred EEEEEEECCCCcchHHhCCcccCceEEEecCCCCCC-CCCccceeec-ccCHHHHHHHHHhhcC
Q psy8429 109 LFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPK-PSDTLDIQRV-GYSAEAIVKWIADRTD 170 (314)
Q Consensus 109 v~F~~vD~~~~~~lf~~~~v~svPtl~~f~p~~~~~-~~~~~~~~~~-~~~a~~l~~fI~~~~~ 170 (314)
+.|+++|+++ ++++++|+++++||+++|+.| +.. ....+.-..+ .++.+.+.+||.++.-
T Consensus 165 v~f~kVd~d~-~~l~~~~~I~~~PTll~~~~G-~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g~ 226 (245)
T 1a0r_P 165 VKFCKIKASN-TGAGDRFSSDVLPTLLVYKGG-ELLSNFISVTEQLAEEFFTGDVESFLNEYGL 226 (245)
T ss_dssp SEEEEEEHHH-HCCTTSSCTTTCSEEEEEETT-EEEEEETTGGGGSCTTCCHHHHHHHHHTTTC
T ss_pred CEEEEEeCCc-HHHHHHCCCCCCCEEEEEECC-EEEEEEeCCcccccccccHHHHHHHHHHcCC
Confidence 9999999988 788999999999999999975 321 1111110011 2568899999988743
No 97
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.47 E-value=1e-14 Score=142.93 Aligned_cols=92 Identities=14% Similarity=0.238 Sum_probs=77.8
Q ss_pred CCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccC--CCCcEEEEEEECCCCcch
Q psy8429 45 KKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQM--YSNKLFFILVDFDEGSDV 122 (314)
Q Consensus 45 ~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~--~~~~v~F~~vD~~~~~~l 122 (314)
.+.|+++|+++|++.+. ..++..++|.|||+ ||++|+++.|+|+++|+.+....+ ..+++.|++||+++++++
T Consensus 22 ~~~V~~Lt~~~F~~~l~-~~~~k~VlV~FyA~----WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~l 96 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHR-VAPLCPWIVLFYND----GCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDL 96 (470)
T ss_dssp CTTEEECSCSCGGGTCT-TGGGSCEEEEEECT----TCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHH
T ss_pred CCCcEECCHHHHHHHHH-hCCCCeEEEEEECC----CCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHH
Confidence 45699999999999874 33345799999999 999999999999999998863211 013699999999999999
Q ss_pred HHhCCcccCceEEEecCCC
Q psy8429 123 FQMLRLNTAPIFMHFPAKG 141 (314)
Q Consensus 123 f~~~~v~svPtl~~f~p~~ 141 (314)
+++|+|+++||+++|.+++
T Consensus 97 a~~y~V~~~PTlilf~~gg 115 (470)
T 3qcp_A 97 CRKYDINFVPRLFFFYPRD 115 (470)
T ss_dssp HHHTTCCSSCEEEEEEESS
T ss_pred HHHcCCCccCeEEEEECCC
Confidence 9999999999999998764
No 98
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.47 E-value=2.3e-13 Score=133.20 Aligned_cols=113 Identities=15% Similarity=0.227 Sum_probs=94.7
Q ss_pred CeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhC
Q psy8429 47 AVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (314)
Q Consensus 47 ~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~ 126 (314)
.+..++.++|++.+.+ .+..++|.|||+ ||++|+.+.|.++++|+.+.. .+++.|+++|.+++ ++.+++
T Consensus 353 ~v~~~~~~~~~~~~~~--~~k~vlv~f~a~----wC~~C~~~~p~~~~l~~~~~~----~~~v~~~~id~~~~-~~~~~~ 421 (481)
T 3f8u_A 353 PVKVVVAENFDEIVNN--ENKDVLIEFYAP----WCGHCKNLEPKYKELGEKLSK----DPNIVIAKMDATAN-DVPSPY 421 (481)
T ss_dssp SSEEECTTTHHHHHTC--TTCEEEEEEECT----TBHHHHHHHHHHHHHHHHTTT----CSSEEEEEEETTSS-CCCTTC
T ss_pred CeEEecccCHHHHhhc--CCCcEEEEEecC----cChhHHHhhHHHHHHHHHhcc----CCCEEEEEEECCch-hhHhhC
Confidence 4888999999999853 245699999999 999999999999999999863 23699999999998 888999
Q ss_pred CcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCcce
Q psy8429 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQIR 174 (314)
Q Consensus 127 ~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~i~ 174 (314)
+++++||+++|++|++.. .... .|.++.+++.+||+++.+....
T Consensus 422 ~v~~~Pt~~~~~~~~~~~---~~~~-~G~~~~~~l~~~l~~~~~~~~~ 465 (481)
T 3f8u_A 422 EVRGFPTIYFSPANKKLN---PKKY-EGGRELSDFISYLQREATNPPV 465 (481)
T ss_dssp CCCSSSEEEEECTTCTTS---CEEC-CSCCSHHHHHHHHHHHCSSCCC
T ss_pred CCcccCEEEEEeCCCeEe---eeEe-CCCCCHHHHHHHHHHhcCCccc
Confidence 999999999999875421 1122 5778999999999999886654
No 99
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.46 E-value=5.1e-13 Score=117.46 Aligned_cols=110 Identities=11% Similarity=0.022 Sum_probs=88.0
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
.++..+++++++++. +.. ...+++.|||+ ||++|+.+.|.++++|+.+... ..+++.|+++|++++++++++
T Consensus 116 ~~~~~l~~~~~~~~~-~~~-~~~~~v~F~a~----wC~~C~~~~p~~~~l~~~~~~~--~~~~v~~~~vd~~~~~~l~~~ 187 (226)
T 1a8l_A 116 REETNLMDETKQAIR-NID-QDVRILVFVTP----TCPYCPLAVRMAHKFAIENTKA--GKGKILGDMVEAIEYPEWADQ 187 (226)
T ss_dssp HTCCCCCHHHHHHHT-TCC-SCEEEEEEECS----SCTTHHHHHHHHHHHHHHHHHT--TCCCEEEEEEEGGGCHHHHHH
T ss_pred CCCCCCCHHHHHHHH-hcC-CCcEEEEEeCC----CCCccHHHHHHHHHHHHhcccc--cCCcEEEEEEEcccCHHHHHh
Confidence 346789999999874 232 23338999999 9999999999999999988521 123699999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
|+|+++||+++|+.| +. .....|..+.+++.+||++.+
T Consensus 188 ~~v~~~Pt~~~~~~G-~~-----~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 188 YNVMAVPKIVIQVNG-ED-----RVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp TTCCSSCEEEEEETT-EE-----EEEEESCCCHHHHHHHHHHHH
T ss_pred CCCcccCeEEEEeCC-ce-----eEEEcCCCCHHHHHHHHHHhh
Confidence 999999999999865 32 122357788999999998864
No 100
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.45 E-value=1.6e-13 Score=109.29 Aligned_cols=100 Identities=10% Similarity=0.176 Sum_probs=80.8
Q ss_pred CCeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcc---
Q psy8429 46 KAVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD--- 121 (314)
Q Consensus 46 ~~VI~Lt~-~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~--- 121 (314)
+..++|++ ++|++++.+ +.+++++|+|+ ||++|+++.|+|+++++. +++.|+++|++++++
T Consensus 6 ~~~~~i~s~e~f~~ii~~---~~~vvi~khat----wCgpc~~~~~~~e~~~~~--------~~v~~~~vdVde~r~~Sn 70 (112)
T 3iv4_A 6 GVAIKLSSIDQFEQVIEE---NKYVFVLKHSE----TCPISANAYDQFNKFLYE--------RDMDGYYLIVQQERDLSD 70 (112)
T ss_dssp GCEEECCSHHHHHHHHHH---CSEEEEEEECT----TCHHHHHHHHHHHHHHHH--------HTCCEEEEEGGGGHHHHH
T ss_pred cceeecCCHHHHHHHHhc---CCCEEEEEECC----cCHhHHHHHHHHHHHhcc--------CCceEEEEEeecCchhhH
Confidence 45677854 789998753 55799999999 999999999999999973 259999999999976
Q ss_pred -hHHhCCccc-CceEEEecCCCCCCCCCccceeecccCHHHHHHHH
Q psy8429 122 -VFQMLRLNT-APIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWI 165 (314)
Q Consensus 122 -lf~~~~v~s-vPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI 165 (314)
+++++||++ .|++++|++| +. .++...+..+.+++.+.+
T Consensus 71 ~IA~~~~V~h~sPq~il~k~G-~~----v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 71 YIAKKTNVKHESPQAFYFVNG-EM----VWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp HHHHHHTCCCCSSEEEEEETT-EE----EEEEEGGGCSHHHHHHHT
T ss_pred HHHHHhCCccCCCeEEEEECC-EE----EEEeeccccCHHHHHHhh
Confidence 899999996 9999999987 32 234444567888877654
No 101
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.45 E-value=9.9e-14 Score=111.45 Aligned_cols=111 Identities=15% Similarity=0.225 Sum_probs=87.0
Q ss_pred CeEEeChhhHHHHHHcC-CCCccEEEEEeeCCCCCCCccchhhHHHH---HHHHHHhccccCCCCcEEEEEEECC--CCc
Q psy8429 47 AVLRFDGQKYKEYIKNG-PRNYSAIVMFTALAPQRNCHICVSASDEY---TIVANSFRYSQMYSNKLFFILVDFD--EGS 120 (314)
Q Consensus 47 ~VI~Lt~~nf~~~v~~~-~r~y~vvV~FtA~~~~~~C~~C~~~~pef---e~vA~s~~~~~~~~~~v~F~~vD~~--~~~ 120 (314)
+.+++++++|++.+... .++..++|.|+|+ ||++|+.+.|++ +++++.+. .++.++.+|++ +++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~----wC~~C~~~~~~~~~~~~~~~~~~------~~~~~~~vd~~~~~~~ 76 (130)
T 2kuc_A 7 DGIAFRELSFPEALKRAEVEDKLLFVDCFTT----WCGPCKRLSKVVFKDSLVADYFN------RHFVNLKMDMEKGEGV 76 (130)
T ss_dssp CCCCCBCCCHHHHHHHHHHHSSCEEEEECCT----TCTHHHHHHHHGGGCHHHHHHHH------HHSEEEEECSSSTTHH
T ss_pred CCCCcccCCHHHHHHHHHhcCCeEEEEEECC----CCccHHHHHHHhcCcHHHHHHHh------cCeEEEEEecCCcchH
Confidence 35678889999877311 1234699999999 999999999999 77877654 35889999998 478
Q ss_pred chHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 121 DVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 121 ~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
+++++++++++|++++|.++|+. .....|..+.+++.++|++..+.+
T Consensus 77 ~~~~~~~v~~~Pt~~~~d~~G~~-----~~~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 77 ELRKKYGVHAYPTLLFINSSGEV-----VYRLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp HHHHHTTCCSSCEEEEECTTSCE-----EEEEESCCCHHHHHHHHHHHHSCC
T ss_pred HHHHHcCCCCCCEEEEECCCCcE-----EEEecCCCCHHHHHHHHHHHHHhc
Confidence 99999999999999999654443 222356778999999999987643
No 102
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.44 E-value=3e-14 Score=114.24 Aligned_cols=109 Identities=18% Similarity=0.278 Sum_probs=88.1
Q ss_pred CCeEEeC-hhhHHHHHHcC-CCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchH
Q psy8429 46 KAVLRFD-GQKYKEYIKNG-PRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (314)
Q Consensus 46 ~~VI~Lt-~~nf~~~v~~~-~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (314)
..+++++ .++|++.+... .++..++|+|+++ ||++|+.+.|.++++++.+. ++.|+.+|++++++++
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~----~C~~C~~~~~~l~~~~~~~~-------~v~~~~v~~~~~~~~~ 82 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTAS----WCGPCRFIAPVFAEYAKKFP-------GAVFLKVDVDELKEVA 82 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSS----SCSCSSSSHHHHHHHHHHCT-------TBCCEECCTTTSGGGH
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECC----CChhHHHHHHHHHHHHHHCC-------CCEEEEEeccchHHHH
Confidence 4588995 58999988531 1345689999999 99999999999999998873 5999999999999999
Q ss_pred HhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
++++++++|++++|+.| +.. .... |.+.+++.++|++.++..
T Consensus 83 ~~~~v~~~Pt~~~~~~g-~~~-----~~~~-g~~~~~l~~~l~~~~~~~ 124 (130)
T 1wmj_A 83 EKYNVEAMPTFLFIKDG-AEA-----DKVV-GARKDDLQNTIVKHVGAT 124 (130)
T ss_dssp HHHTCCSSCCCCBCTTT-TCC-----BCCC-TTCTTTHHHHHHHHTSSS
T ss_pred HHcCCCccceEEEEeCC-eEE-----EEEe-CCCHHHHHHHHHHHHhcc
Confidence 99999999999999765 321 1112 357889999999987643
No 103
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.42 E-value=8.9e-13 Score=130.02 Aligned_cols=113 Identities=15% Similarity=0.337 Sum_probs=91.1
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
+.|.+|++++|++.+.+. +..++|.|||+ ||++|+.+.|.++++|+.+... ..++.|+++|++++... +
T Consensus 358 ~~v~~l~~~~f~~~v~~~--~k~vlv~F~a~----wC~~C~~~~p~~~~l~~~~~~~---~~~v~~~~vd~~~~~~~-~- 426 (504)
T 2b5e_A 358 SSVFQLVGKNHDEIVNDP--KKDVLVLYYAP----WCGHCKRLAPTYQELADTYANA---TSDVLIAKLDHTENDVR-G- 426 (504)
T ss_dssp CSEEEECTTTHHHHHHCT--TCCEEEEEECT----TCHHHHHHHHHHHHHHHHHHHH---CSSCEEEEEEGGGCCCS-S-
T ss_pred ccceecccccHHHhhccC--CCCEEEEEECC----CChhHHHHhHHHHHHHHHhhcc---CCcEEEEEecCCccccc-c-
Confidence 458999999999998643 45699999999 9999999999999999988521 24699999999998754 4
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCcc
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~i 173 (314)
++|+++||+++|+.|.+ .....| .|.++.+++.+||+++.+..+
T Consensus 427 ~~v~~~Pt~~~~~~G~~-~~~~~~---~G~~~~~~l~~~i~~~~~~~~ 470 (504)
T 2b5e_A 427 VVIEGYPTIVLYPGGKK-SESVVY---QGSRSLDSLFDFIKENGHFDV 470 (504)
T ss_dssp CCCSSSSEEEEECCTTS-CCCCBC---CSCCCHHHHHHHHHHHCTTCC
T ss_pred CCceecCeEEEEeCCce-ecceEe---cCCCCHHHHHHHHHhcCCCCC
Confidence 99999999999977632 111222 477899999999999977554
No 104
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.42 E-value=7.3e-13 Score=98.13 Aligned_cols=82 Identities=20% Similarity=0.199 Sum_probs=70.1
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCCcccCceEEEecCCCCCCCCC
Q psy8429 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSD 147 (314)
Q Consensus 68 ~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~ 147 (314)
..+++|+++ ||++|+++.|.++++++.+. +++.|..+|++++++++++++++++|++++ .| +.
T Consensus 4 ~~vv~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G-~~---- 66 (85)
T 1fo5_A 4 VKIELFTSP----MCPHCPAAKRVVEEVANEMP------DAVEVEYINVMENPQKAMEYGIMAVPTIVI--NG-DV---- 66 (85)
T ss_dssp EEEEEEECC----CSSCCCTHHHHHHHHHHHCS------SSEEEEEEESSSSCCTTTSTTTCCSSEEEE--TT-EE----
T ss_pred eEEEEEeCC----CCCchHHHHHHHHHHHHHcC------CceEEEEEECCCCHHHHHHCCCcccCEEEE--CC-EE----
Confidence 468999999 99999999999999999875 469999999999999999999999999998 43 31
Q ss_pred ccceeecccCHHHHHHHHHhhc
Q psy8429 148 TLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 148 ~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
. ..|..+.+++.+++++.+
T Consensus 67 --~-~~G~~~~~~l~~~l~~~l 85 (85)
T 1fo5_A 67 --E-FIGAPTKEALVEAIKKRL 85 (85)
T ss_dssp --E-CCSSSSSHHHHHHHHHHC
T ss_pred --e-eecCCCHHHHHHHHHHhC
Confidence 1 145568899999998753
No 105
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.42 E-value=5.5e-13 Score=98.80 Aligned_cols=81 Identities=19% Similarity=0.153 Sum_probs=70.1
Q ss_pred EEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCCcccCceEEEecCCCCCCCCCc
Q psy8429 69 AIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDT 148 (314)
Q Consensus 69 vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~ 148 (314)
.+++|+++ ||++|+.+.|.++++++.+. +++.|..+|+++++++.++++++++|++++ .| +.
T Consensus 4 ~vv~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G-~~----- 65 (85)
T 1nho_A 4 NIEVFTSP----TCPYCPMAIEVVDEAKKEFG------DKIDVEKIDIMVDREKAIEYGLMAVPAIAI--NG-VV----- 65 (85)
T ss_dssp CEEEESCS----SSCCSTTHHHHHHHHHHHHC------SSCCEEEECTTTCGGGGGGTCSSCSSEEEE--TT-TE-----
T ss_pred EEEEEECC----CCcchHHHHHHHHHHHHHhc------CCeEEEEEECCCCHHHHHhCCceeeCEEEE--CC-EE-----
Confidence 57899999 99999999999999999885 469999999999999999999999999998 43 31
Q ss_pred cceeecccCHHHHHHHHHhhc
Q psy8429 149 LDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 149 ~~~~~~~~~a~~l~~fI~~~~ 169 (314)
. ..|..+.+++.+++++.+
T Consensus 66 -~-~~G~~~~~~l~~~l~~~l 84 (85)
T 1nho_A 66 -R-FVGAPSREELFEAINDEM 84 (85)
T ss_dssp -E-EECSSCCHHHHHHHHHHC
T ss_pred -E-EccCCCHHHHHHHHHHHh
Confidence 1 246668999999998865
No 106
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.40 E-value=5.4e-13 Score=108.53 Aligned_cols=111 Identities=11% Similarity=0.169 Sum_probs=83.1
Q ss_pred CeEEe-ChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHH---HHHHHHhccccCCCCcEEEEEEEC----CC
Q psy8429 47 AVLRF-DGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEY---TIVANSFRYSQMYSNKLFFILVDF----DE 118 (314)
Q Consensus 47 ~VI~L-t~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pef---e~vA~s~~~~~~~~~~v~F~~vD~----~~ 118 (314)
....+ +.++|+..+.+ .++..++|+|||+ ||++|+++.|.+ +++++.+. ++.|+.+|+ ++
T Consensus 12 ~f~~~~~~~~~~~~l~~-~~~k~vlv~F~a~----wC~~C~~~~~~~~~~~~l~~~~~-------~~~~~~vd~~~~~~~ 79 (134)
T 2fwh_A 12 NFTQIKTVDELNQALVE-AKGKPVMLDLYAD----WCVACKEFEKYTFSDPQVQKALA-------DTVLLQANVTANDAQ 79 (134)
T ss_dssp CCEECCSHHHHHHHHHH-HTTSCEEEEEECT----TCHHHHHHHHHTTTSHHHHHHTT-------TSEEEEEECTTCCHH
T ss_pred CcEEecCHHHHHHHHHH-hcCCcEEEEEECC----CCHHHHHHHHHhcCCHHHHHHhc-------CcEEEEEeCCCCcch
Confidence 34445 45778887643 2355799999999 999999999999 99998874 499999999 55
Q ss_pred CcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 119 ~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
+++++++|+++++|++++|.++|+.. ......|..+.++|.+++++..+.+
T Consensus 80 ~~~l~~~~~v~~~Pt~~~~d~~G~~v---~~~~~~G~~~~~~l~~~l~~~~~~~ 130 (134)
T 2fwh_A 80 DVALLKHLNVLGLPTILFFDGQGQEH---PQARVTGFMDAETFSAHLRDRQPHH 130 (134)
T ss_dssp HHHHHHHTTCCSSSEEEEECTTSCBC---GGGCBCSCCCHHHHHHHHHHC----
T ss_pred HHHHHHHcCCCCCCEEEEECCCCCEe---eeeeeeeccCHHHHHHHHHhcCccc
Confidence 68999999999999999995544431 0012256788999999999876643
No 107
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.37 E-value=7.5e-13 Score=106.94 Aligned_cols=89 Identities=16% Similarity=0.222 Sum_probs=73.0
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHH--HHHHHhccccCCCCcEEEEEEEC---CCCcchHHhCCc---ccCceEEEe
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYT--IVANSFRYSQMYSNKLFFILVDF---DEGSDVFQMLRL---NTAPIFMHF 137 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe--~vA~s~~~~~~~~~~v~F~~vD~---~~~~~lf~~~~v---~svPtl~~f 137 (314)
+..++|+|+|+ ||++|+.+.|.++ ++++.+. +++.|+.+|+ ++++++.++|++ +++||+++|
T Consensus 29 ~k~vlv~f~a~----wC~~C~~~~~~l~~~~~~~~~~------~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~ 98 (133)
T 3fk8_A 29 HKPTLLVFGAN----WCTDCRALDKSLRNQKNTALIA------KHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVV 98 (133)
T ss_dssp TCCEEEEEECT----TCHHHHHHHHHHTSHHHHHHHH------HHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEE
T ss_pred CCcEEEEEcCC----CCHHHHHHHHHhCCHHHHHHhc------CCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEE
Confidence 44699999999 9999999999999 9998885 3699999999 889999999999 999999999
Q ss_pred cCCCCCCCCCccceeec-------ccCHHHHHHHHHhhc
Q psy8429 138 PAKGKPKPSDTLDIQRV-------GYSAEAIVKWIADRT 169 (314)
Q Consensus 138 ~p~~~~~~~~~~~~~~~-------~~~a~~l~~fI~~~~ 169 (314)
.++|+.. ....+ ..+.+++.+|+++..
T Consensus 99 d~~G~~~-----~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 99 NSDGKVR-----YTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp CTTSCEE-----EECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred CCCCCEE-----EEecCCcccccccCCHHHHHHHHHHhc
Confidence 5444421 11112 357899999998753
No 108
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.37 E-value=3.4e-12 Score=112.58 Aligned_cols=103 Identities=14% Similarity=0.074 Sum_probs=85.3
Q ss_pred CCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 46 KAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 46 ~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
.++.++++++|++++ +.. ...+++.|+|+ ||++|+.+.|.++++|+.+ +++.|+.+|++++++++++
T Consensus 118 ~~~~~l~~~~~~~~~-~~~-~~~~~v~F~a~----wC~~C~~~~~~~~~~~~~~-------~~v~~~~vd~~~~~~l~~~ 184 (229)
T 2ywm_A 118 QRKPQLSEKTLELLQ-VVD-IPIEIWVFVTT----SCGYCPSAAVMAWDFALAN-------DYITSKVIDASENQDLAEQ 184 (229)
T ss_dssp TTCCSCCHHHHHHHT-TCC-SCEEEEEEECT----TCTTHHHHHHHHHHHHHHC-------TTEEEEEEEGGGCHHHHHH
T ss_pred CCccCCCHHHHHHHH-hcC-CCeEEEEEECC----CCcchHHHHHHHHHHHHHC-------CCeEEEEEECCCCHHHHHH
Confidence 457899999999985 232 33347889999 9999999999999999886 2699999999999999999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
++|+++||+++ .| +. ....|..+.+++.+|+++.++
T Consensus 185 ~~v~~~Pt~~~--~G-~~------~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 185 FQVVGVPKIVI--NK-GV------AEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp TTCCSSSEEEE--GG-GT------EEEESCCCHHHHHHHHHHHHH
T ss_pred cCCcccCEEEE--CC-EE------EEeeCCCCHHHHHHHHHHHhh
Confidence 99999999998 43 32 212577889999999988764
No 109
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.36 E-value=5e-12 Score=119.12 Aligned_cols=127 Identities=17% Similarity=0.273 Sum_probs=102.1
Q ss_pred CCchHHHHHHHHhhhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCc
Q psy8429 29 SLSLGDRVLHLSEMNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNK 108 (314)
Q Consensus 29 ~~~~~~~~~~L~~l~~~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~ 108 (314)
|+...+.+.+..+....+.|.++|++|++++.. .+ ...++++|+++ ||++|+++.|+|+++|+.+. ++
T Consensus 100 g~~~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~-~~-~~~~~v~F~~~----~~~~~~~~~~~~~~~A~~~~------~~ 167 (361)
T 3uem_A 100 GEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFG-GE-IKTHILLFLPK----SVSDYDGKLSNFKTAAESFK------GK 167 (361)
T ss_dssp SCCCHHHHHHHHHHHSSCSEEECSTTTHHHHHS-CS-CCEEEEEECCS----SSSSHHHHHHHHHHHHGGGT------TT
T ss_pred CcCCHHHHHHHHHHcCCCcceecCcccHHHHhc-CC-CCcEEEEEEeC----CchhHHHHHHHHHHHHHHcc------Cc
Confidence 344556677776665566799999999999874 32 23578899999 99999999999999999986 57
Q ss_pred EEEEEEECC--CCcchHHhCCccc--CceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 109 LFFILVDFD--EGSDVFQMLRLNT--APIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 109 v~F~~vD~~--~~~~lf~~~~v~s--vPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
+.|+.+|++ ++++++++|||++ +|++.+|..++.. ..|....+..+++.+.+|+.+.++
T Consensus 168 i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~~---~ky~~~~~~~~~~~l~~fi~~~l~ 230 (361)
T 3uem_A 168 ILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEM---TKYKPESEELTAERITEFCHRFLE 230 (361)
T ss_dssp CEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC--C---CEECCSSCCCCHHHHHHHHHHHHT
T ss_pred eEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCCcc---cccCCCccccCHHHHHHHHHHHhc
Confidence 999999999 6899999999998 9999999985322 244433467899999999999875
No 110
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.33 E-value=2.1e-12 Score=109.14 Aligned_cols=108 Identities=13% Similarity=0.212 Sum_probs=82.5
Q ss_pred eEEeChhhHHHHHH-cCCCCccEEEEEeeCCCCCCCccchhhHHHH---HHHHHHhccccCCCCcEEEEEEECCCCcch-
Q psy8429 48 VLRFDGQKYKEYIK-NGPRNYSAIVMFTALAPQRNCHICVSASDEY---TIVANSFRYSQMYSNKLFFILVDFDEGSDV- 122 (314)
Q Consensus 48 VI~Lt~~nf~~~v~-~~~r~y~vvV~FtA~~~~~~C~~C~~~~pef---e~vA~s~~~~~~~~~~v~F~~vD~~~~~~l- 122 (314)
..+.+.++|++.+. +..++..++|.|||+ ||++|+++++++ .++++.+. +++.|+.+|+++++++
T Consensus 28 ~~~~~~~~~~~~~~~a~~~gk~vlv~F~A~----WC~~C~~~~~~~~~~~~~~~~~~------~~~~~v~v~~d~~~~~~ 97 (172)
T 3f9u_A 28 EVHAKFDDYDLGMEYARQHNKPVMLDFTGY----GCVNCRKMELAVWTDPKVSSIIN------NDYVLITLYVDNKTPLT 97 (172)
T ss_dssp CCCCCBSCHHHHHHHHHHTTCCEEEEEECT----TCHHHHHHHHHTTTSHHHHHHHH------HHCEEEEEETTCCCEEE
T ss_pred ccccchhhHHHHHHHHHHcCCeEEEEEECC----CCHHHHHHHHHhcCCHHHHHHhc------CCEEEEEEecCcccccc
Confidence 45567778888762 122356799999999 999999997776 77777664 3699999999998766
Q ss_pred -------------------------HHhCCcccCceEEEecCCCCCCCCCccceeecccC-HHHHHHHHHhhcC
Q psy8429 123 -------------------------FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYS-AEAIVKWIADRTD 170 (314)
Q Consensus 123 -------------------------f~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~-a~~l~~fI~~~~~ 170 (314)
.++|+++++||++++.+.|+.. ....|..+ ++++.++|++.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~-----~~~~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 98 EPVKIMENGTERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPL-----NKSYAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp EEEEEEETTEEEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBS-----SCCBCSCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhcchhhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEE-----eeccCCCCCHHHHHHHHHHHHH
Confidence 7899999999999996655542 11236666 9999999987653
No 111
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.27 E-value=5.5e-11 Score=106.90 Aligned_cols=109 Identities=10% Similarity=0.025 Sum_probs=85.7
Q ss_pred eEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCC
Q psy8429 48 VLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR 127 (314)
Q Consensus 48 VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~ 127 (314)
-..+++++++.+. +- ++..+++.|||+ ||++|+.+.|.++++|+.+.+. ..+++.+.++|++++++++++++
T Consensus 122 ~~~l~~~~~~~~~-~~-~~~~~vv~F~a~----wC~~C~~~~p~l~~la~~~~~~--~~~~v~~~~vd~~~~~~~~~~~~ 193 (243)
T 2hls_A 122 ESGLEDATKEALK-SL-KGRVHIETIITP----SCPYCPYAVLLAHMFAYEAWKQ--GNPVILSEAVEAYENPDIADKYG 193 (243)
T ss_dssp CCCCCHHHHHHHH-HC-CSCEEEEEEECS----SCSSHHHHHHHHHHHHHHHHHT--TCCCEEEEEEETTTCHHHHHHTT
T ss_pred CCCCCHHHHHHHH-Hc-CCCcEEEEEECC----CCCCcHHHHHHHHHHHHHcccc--cCCcEEEEEEECccCHHHHHHcC
Confidence 3467788777753 22 233568889999 9999999999999999987310 11369999999999999999999
Q ss_pred cccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCcce
Q psy8429 128 LNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQIR 174 (314)
Q Consensus 128 v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~i~ 174 (314)
|+++||+++ . |+. . ..|.++.+++.++|.+.++.+..
T Consensus 194 V~~vPt~~i--~-G~~------~-~~G~~~~~~l~~~l~~~~~~~~~ 230 (243)
T 2hls_A 194 VMSVPSIAI--N-GYL------V-FVGVPYEEDFLDYVKSAAEGRLT 230 (243)
T ss_dssp CCSSSEEEE--T-TEE------E-EESCCCHHHHHHHHHHHHTTCCC
T ss_pred CeeeCeEEE--C-CEE------E-EeCCCCHHHHHHHHHHHhhcccc
Confidence 999999987 3 331 1 25778899999999999886544
No 112
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.23 E-value=1.6e-11 Score=102.38 Aligned_cols=89 Identities=18% Similarity=0.225 Sum_probs=71.9
Q ss_pred CccEEEEEe-eCCCCCCCccchhhHHHH---HHHHHHhccccCCCCcEEEEEEECCCCc-----------chHHhCCccc
Q psy8429 66 NYSAIVMFT-ALAPQRNCHICVSASDEY---TIVANSFRYSQMYSNKLFFILVDFDEGS-----------DVFQMLRLNT 130 (314)
Q Consensus 66 ~y~vvV~Ft-A~~~~~~C~~C~~~~pef---e~vA~s~~~~~~~~~~v~F~~vD~~~~~-----------~lf~~~~v~s 130 (314)
+..++|.|| |+ ||++|+.+.|++ +++++... .++.++.+|+++.+ ++.++|++++
T Consensus 47 gk~vlv~F~ga~----wC~~C~~~~p~l~~~~~~~~~~~------~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~ 116 (154)
T 2ju5_A 47 HKPIGLFFTGSD----WCMWCIKMQDQILQSSEFKHFAG------VHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTG 116 (154)
T ss_dssp CCCEEEEEECTT----TCHHHHHHHHHTTTSHHHHHHHH------HHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCS
T ss_pred CCeEEEEEeCCC----CCHhHHHHHHHHhcCHHHHHHhc------CcEEEEEecCccccCCChhhHhhHHHHHHHcCCCC
Confidence 446999999 99 999999999999 77766543 36999999998865 8999999999
Q ss_pred CceEEEecCCCCCCCCCccceeeccc--CHHHHHHHHHhhcC
Q psy8429 131 APIFMHFPAKGKPKPSDTLDIQRVGY--SAEAIVKWIADRTD 170 (314)
Q Consensus 131 vPtl~~f~p~~~~~~~~~~~~~~~~~--~a~~l~~fI~~~~~ 170 (314)
+|+++++.++|+. .... |.. +.+++.++|++.++
T Consensus 117 ~Pt~~~~d~~G~~-----~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 117 FPELVFIDAEGKQ-----LARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp SSEEEEECTTCCE-----EEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCCE-----EEEe-cCCCCCHHHHHHHHHHHHh
Confidence 9999999655543 2222 444 79999999998765
No 113
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.22 E-value=8.9e-12 Score=106.21 Aligned_cols=82 Identities=5% Similarity=0.032 Sum_probs=69.0
Q ss_pred eEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCC
Q psy8429 48 VLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR 127 (314)
Q Consensus 48 VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~ 127 (314)
.++++++.++.+ . .-++..+++.|+|+ ||+||+...|.++++++.+. ++.|..+|.|+++++.++|+
T Consensus 38 ~~~~~~~~~~~l-~-~~~~k~vvv~F~A~----WC~pC~~~~P~l~~l~~~~~-------~v~~~~v~~d~~~~~~~~~~ 104 (167)
T 1z6n_A 38 SNGLPSALTERL-Q-RIERRYRLLVAGEM----WCPDCQINLAALDFAQRLQP-------NIELAIISKGRAEDDLRQRL 104 (167)
T ss_dssp HHCCCHHHHHHH-H-TCCSCEEEEEECCT----TCHHHHHHHHHHHHHHHHCT-------TEEEEEECHHHHHHHTTTTT
T ss_pred ccCCCHHHHHHH-H-HhCCCEEEEEEECC----CChhHHHHHHHHHHHHHHCC-------CcEEEEEECCCCHHHHHHHH
Confidence 467888877665 3 22345688999999 99999999999999998763 59999999999999999887
Q ss_pred ---cccCceEEEecCCCC
Q psy8429 128 ---LNTAPIFMHFPAKGK 142 (314)
Q Consensus 128 ---v~svPtl~~f~p~~~ 142 (314)
++++||+++|.++|+
T Consensus 105 ~~~v~~iPt~i~~~~~G~ 122 (167)
T 1z6n_A 105 ALERIAIPLVLVLDEEFN 122 (167)
T ss_dssp TCSSCCSSEEEEECTTCC
T ss_pred HcCCCCcCeEEEECCCCC
Confidence 999999999998754
No 114
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.21 E-value=4.3e-11 Score=105.46 Aligned_cols=80 Identities=9% Similarity=-0.043 Sum_probs=66.0
Q ss_pred CCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHH
Q psy8429 81 NCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEA 160 (314)
Q Consensus 81 ~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~ 160 (314)
||++|+++.|+++++|+.+.+ ++++.|+++|++++++++++|+|+++||+.+|+.+ +. ...+ .|..+.++
T Consensus 36 ~C~~c~~~~~~~~~~a~~~~~----~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~~~-~~----~~~~-~G~~~~~~ 105 (229)
T 2ywm_A 36 SCQTAEELLKETVEVIGEAVG----QDKIKLDIYSPFTHKEETEKYGVDRVPTIVIEGDK-DY----GIRY-IGLPAGLE 105 (229)
T ss_dssp GGGHHHHHHHHHHHHHHHHHC----TTTEEEEEECTTTCHHHHHHTTCCBSSEEEEESSS-CC----CEEE-ESCCCTTH
T ss_pred ccHHHHHHHHHHHHHHhccCC----CCceEEEEecCcccHHHHHHcCCCcCcEEEEECCC-cc----ccee-cCCccHHH
Confidence 999999999999999988852 25799999999999999999999999999999753 22 1222 46678888
Q ss_pred HHHHHHhhcC
Q psy8429 161 IVKWIADRTD 170 (314)
Q Consensus 161 l~~fI~~~~~ 170 (314)
+.+|+.+.++
T Consensus 106 l~~~~~~~~~ 115 (229)
T 2ywm_A 106 FTTLINGIFH 115 (229)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8888877643
No 115
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.80 E-value=2.2e-12 Score=103.63 Aligned_cols=95 Identities=16% Similarity=0.198 Sum_probs=75.2
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHH---HHHHHHhccccCCCCcEEEEEEECC--CCcchHHhCCcccCceEEEecCC
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEY---TIVANSFRYSQMYSNKLFFILVDFD--EGSDVFQMLRLNTAPIFMHFPAK 140 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pef---e~vA~s~~~~~~~~~~v~F~~vD~~--~~~~lf~~~~v~svPtl~~f~p~ 140 (314)
+..++|+|+|+ ||++|+.+.|.+ +++++.+. +++.|+.+|++ ++++++++++++++|++++|.+.
T Consensus 19 ~k~vlv~f~a~----wC~~C~~~~~~~~~~~~~~~~~~------~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~ 88 (130)
T 2lst_A 19 GRMVMVYFHSE----HCPYCQQMNTFVLSDPGVSRLLE------ARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPK 88 (130)
Confidence 45689999999 999999999999 99988764 45899999995 57899999999999999999642
Q ss_pred -CCCCCCCccceeecccCHHHHHHHHHhhcCCcc
Q psy8429 141 -GKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (314)
Q Consensus 141 -~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~i 173 (314)
|+.. ......|..+.+++.++|++.++..-
T Consensus 89 ~G~~~---~~~~~~G~~~~~~l~~~l~~~~~~~~ 119 (130)
T 2lst_A 89 AGAWE---EVGRLFGSRPRAEFLKELRQVCVKGG 119 (130)
Confidence 3320 01222466788999999998887553
No 116
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.18 E-value=7.6e-11 Score=103.44 Aligned_cols=100 Identities=17% Similarity=0.235 Sum_probs=74.3
Q ss_pred hhHHHHH-HcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC--CcchHHhCCccc
Q psy8429 54 QKYKEYI-KNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE--GSDVFQMLRLNT 130 (314)
Q Consensus 54 ~nf~~~v-~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~--~~~lf~~~~v~s 130 (314)
+.+++.+ .+. .+-.++++|++++ ||++|++++|.++++|+. . +++.|+++|+++ +++++++|+|++
T Consensus 10 ~~~~~~~~~~~-~~~v~lv~f~~~~---~C~~C~~~~~~~~~la~~-~------~~v~~~~vd~~~~~~~~~~~~~~v~~ 78 (226)
T 1a8l_A 10 KVIKEEFFSKM-VNPVKLIVFVRKD---HCQYCDQLKQLVQELSEL-T------DKLSYEIVDFDTPEGKELAKRYRIDR 78 (226)
T ss_dssp HHHHHHTGGGC-CSCEEEEEEECSS---SCTTHHHHHHHHHHHHTT-C------TTEEEEEEETTSHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHhc-CCCeEEEEEecCC---CCchhHHHHHHHHHHHhh-C------CceEEEEEeCCCcccHHHHHHcCCCc
Confidence 4455554 222 2334678899874 999999999999999964 2 479999999999 999999999999
Q ss_pred CceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 131 APIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 131 vPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
+||+++|++|... ...+ .+..+.+++.+|+.+..
T Consensus 79 ~Pt~~~~~~g~~~----~~~~-~G~~~~~~l~~~l~~~l 112 (226)
T 1a8l_A 79 APATTITQDGKDF----GVRY-FGLPAGHEFAAFLEDIV 112 (226)
T ss_dssp SSEEEEEETTBCC----SEEE-ESCCCTTHHHHHHHHHH
T ss_pred CceEEEEcCCcee----eEEE-eccCcHHHHHHHHHHHH
Confidence 9999999875211 1122 35556677888877644
No 117
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.15 E-value=4.4e-11 Score=94.10 Aligned_cols=73 Identities=14% Similarity=0.136 Sum_probs=59.3
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC------CCcchHHhCCcccCceEEEecCCC
Q psy8429 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD------EGSDVFQMLRLNTAPIFMHFPAKG 141 (314)
Q Consensus 68 ~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~------~~~~lf~~~~v~svPtl~~f~p~~ 141 (314)
.++|.|||+ ||++|++++|.|+++|+.+. .+|++ ++++++++++|+++||+++ .|
T Consensus 14 ~~vV~F~A~----WC~~C~~~~p~~~~~a~~~~------------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G- 74 (106)
T 3kp8_A 14 IGGTMYGAY----WCPHCQDQKELFGAAFDQVP------------YVECSPNGPGTPQAQECTEAGITSYPTWII--NG- 74 (106)
T ss_dssp HTCEEEECT----TCHHHHHHHHHHGGGGGGSC------------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TT-
T ss_pred CEEEEEECC----CCHHHHHHHHHHHHHHHhCC------------EEEEecccccchhHHHHHHcCCeEeCEEEE--CC-
Confidence 357999999 99999999999999986652 45555 6889999999999999876 33
Q ss_pred CCCCCCccceeecccCHHHHHHHHHh
Q psy8429 142 KPKPSDTLDIQRVGYSAEAIVKWIAD 167 (314)
Q Consensus 142 ~~~~~~~~~~~~~~~~a~~l~~fI~~ 167 (314)
+ . ..|..+.+++.+|+.-
T Consensus 75 ~-----~---~~G~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 75 R-----T---YTGVRSLEALAVASGY 92 (106)
T ss_dssp E-----E---EESCCCHHHHHHHHTC
T ss_pred E-----E---ecCCCCHHHHHHHhCC
Confidence 2 1 2578899999999743
No 118
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.15 E-value=3.4e-11 Score=96.61 Aligned_cols=90 Identities=10% Similarity=0.098 Sum_probs=67.4
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC--cchHHhCCcccCceEEEecCCCCCC
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG--SDVFQMLRLNTAPIFMHFPAKGKPK 144 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~--~~lf~~~~v~svPtl~~f~p~~~~~ 144 (314)
..++|+|+|+ ||++|++++|+ ++..|.... ....+.+.++|++++ +++..+++|+++||+++|..| +.
T Consensus 19 ~~~LV~F~A~----wC~~Ck~~~~~---i~~~~~~~a-~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G-~e- 88 (116)
T 3dml_A 19 ELRLLMFEQP----GCLYCARWDAE---IAPQYPLTD-EGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGD-VE- 88 (116)
T ss_dssp CEEEEEEECT----TCHHHHHHHHH---TTTTGGGSH-HHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETT-EE-
T ss_pred CCEEEEEECC----CCHHHHHHHHH---HHhhHHHhh-hcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECC-EE-
Confidence 3589999999 99999999974 344443100 001267888999886 589999999999999999965 32
Q ss_pred CCCccceeecccCHHHHHHHHHhhcC
Q psy8429 145 PSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 145 ~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
.....|..++++|.+||++.++
T Consensus 89 ----v~Ri~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 89 ----SGRLEGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp ----EEEEECCCCHHHHHHHHHHHHH
T ss_pred ----EeeecCCCCHHHHHHHHHHHHh
Confidence 2344677899999999988654
No 119
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.13 E-value=2.5e-11 Score=104.07 Aligned_cols=81 Identities=20% Similarity=0.314 Sum_probs=66.7
Q ss_pred EeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHH-H--HHHHHHhccccCCCCcEEEEEEECCCCcchHHhC
Q psy8429 50 RFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDE-Y--TIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (314)
Q Consensus 50 ~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pe-f--e~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~ 126 (314)
.-+++.|++...+ +.+++|.|||+ ||++|+.++|+ | +++++.+. +++.+++||.++++++.+.|
T Consensus 26 ~~~~ea~~~A~~~---~KpVlvdF~A~----WC~~Ck~m~~~~f~~~~va~~l~------~~fv~ikVD~de~~~l~~~y 92 (173)
T 3ira_A 26 PWGEEAFEKARKE---NKPVFLSIGYS----TCHWCHMMAHESFEDEEVAGLMN------EAFVSIKVDREERPDIDNIY 92 (173)
T ss_dssp CSSHHHHHHHHHH---TCCEEEEEECT----TCHHHHHHHHHTTTCHHHHHHHH------HHCEEEEEETTTCHHHHHHH
T ss_pred CcCHHHHHHHHHh---CCCEEEecccc----hhHhhccccccccCCHHHHHHHH------hcCceeeeCCcccCcHHHHH
Confidence 4456788876532 45799999999 99999999994 3 57887765 36899999999999999888
Q ss_pred --------CcccCceEEEecCCCCC
Q psy8429 127 --------RLNTAPIFMHFPAKGKP 143 (314)
Q Consensus 127 --------~v~svPtl~~f~p~~~~ 143 (314)
++.++|+++++.|+|++
T Consensus 93 ~~~~q~~~gv~g~Pt~v~l~~dG~~ 117 (173)
T 3ira_A 93 MTVCQIILGRGGWPLNIIMTPGKKP 117 (173)
T ss_dssp HHHHHHHHSCCCSSEEEEECTTSCE
T ss_pred HHHHHHHcCCCCCcceeeECCCCCc
Confidence 99999999999876553
No 120
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.13 E-value=5.9e-11 Score=90.30 Aligned_cols=75 Identities=17% Similarity=0.423 Sum_probs=61.5
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCCcccCceEEEecCCCCCCCCCcc
Q psy8429 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTL 149 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~ 149 (314)
+++||++ ||++|++++|.+++++..+ |.++|+++++++.++|+++ +|++++ .+| +. .
T Consensus 3 vv~f~a~----~C~~C~~~~~~L~~~~~~~-----------~~~vdid~~~~l~~~~g~~-vPtl~~-~~G-~~-----v 59 (87)
T 1ttz_A 3 LTLYQRD----DCHLCDQAVEALAQARAGA-----------FFSVFIDDDAALESAYGLR-VPVLRD-PMG-RE-----L 59 (87)
T ss_dssp EEEEECS----SCHHHHHHHHHHHHTTCCC-----------EEEEECTTCHHHHHHHTTT-CSEEEC-TTC-CE-----E
T ss_pred EEEEECC----CCchHHHHHHHHHHHHHhh-----------eEEEECCCCHHHHHHhCCC-cCeEEE-ECC-EE-----E
Confidence 6899999 9999999999998766321 6899999999999999998 999988 554 31 1
Q ss_pred ceeecccCHHHHHHHHHhhcC
Q psy8429 150 DIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 150 ~~~~~~~~a~~l~~fI~~~~~ 170 (314)
.++.+.+++.+||++...
T Consensus 60 ---~g~~~~~~L~~~l~~~~~ 77 (87)
T 1ttz_A 60 ---DWPFDAPRLRAWLDAAPH 77 (87)
T ss_dssp ---ESCCCHHHHHHHHHTCC-
T ss_pred ---eCCCCHHHHHHHHHHHHH
Confidence 267889999999987654
No 121
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.12 E-value=1.7e-10 Score=83.85 Aligned_cols=73 Identities=14% Similarity=0.048 Sum_probs=60.4
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCCcccCceEEEecCCCCCCCCCcc
Q psy8429 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTL 149 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~ 149 (314)
.|.|+|+ ||++|+++.|.++++++.+. +++.++++| ++++.++++++++||+++ +| +. .
T Consensus 3 ~v~f~a~----wC~~C~~~~~~l~~~~~~~~------~~~~~~~v~---~~~~~~~~~v~~~Pt~~~--~G-~~-----~ 61 (77)
T 1ilo_A 3 KIQIYGT----GCANCQMLEKNAREAVKELG------IDAEFEKIK---EMDQILEAGLTALPGLAV--DG-EL-----K 61 (77)
T ss_dssp EEEEECS----SSSTTHHHHHHHHHHHHHTT------CCEEEEEEC---SHHHHHHHTCSSSSCEEE--TT-EE-----E
T ss_pred EEEEEcC----CChhHHHHHHHHHHHHHHcC------CceEEEEec---CHHHHHHCCCCcCCEEEE--CC-EE-----E
Confidence 4789999 99999999999999999875 469999998 789999999999999998 43 32 1
Q ss_pred ceeeccc-CHHHHHHHH
Q psy8429 150 DIQRVGY-SAEAIVKWI 165 (314)
Q Consensus 150 ~~~~~~~-~a~~l~~fI 165 (314)
. .|.. +.+++.+|+
T Consensus 62 ~--~G~~~~~~~l~~~l 76 (77)
T 1ilo_A 62 I--MGRVASKEEIKKIL 76 (77)
T ss_dssp E--CSSCCCHHHHHHHC
T ss_pred E--cCCCCCHHHHHHHh
Confidence 1 2555 788988876
No 122
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.11 E-value=8.9e-11 Score=92.85 Aligned_cols=77 Identities=12% Similarity=0.301 Sum_probs=66.2
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCCcccCceEEEecCCCCCCCCC
Q psy8429 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSD 147 (314)
Q Consensus 68 ~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~ 147 (314)
..+++||++ ||++|++++|.++++++++ ++.|.++|+++++++.++|+++ +|++++|.+| +.
T Consensus 30 ~~vv~y~~~----~C~~C~~a~~~L~~l~~e~--------~i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG-~~---- 91 (107)
T 2fgx_A 30 RKLVVYGRE----GCHLCEEMIASLRVLQKKS--------WFELEVINIDGNEHLTRLYNDR-VPVLFAVNED-KE---- 91 (107)
T ss_dssp CCEEEEECS----SCHHHHHHHHHHHHHHHHS--------CCCCEEEETTTCHHHHHHSTTS-CSEEEETTTT-EE----
T ss_pred cEEEEEeCC----CChhHHHHHHHHHHHHHhc--------CCeEEEEECCCCHHHHHHhCCC-CceEEEEECC-EE----
Confidence 468999999 9999999999999999875 2889999999999999999997 9999999875 31
Q ss_pred ccceeecccCHHHHHHHH
Q psy8429 148 TLDIQRVGYSAEAIVKWI 165 (314)
Q Consensus 148 ~~~~~~~~~~a~~l~~fI 165 (314)
. ..++.+.+++.+||
T Consensus 92 -v--~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 92 -L--CHYFLDSDVIGAYL 106 (107)
T ss_dssp -E--ECSSCCCHHHHHHH
T ss_pred -E--EecCCCHHHHHHHh
Confidence 1 13668889999887
No 123
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.11 E-value=3.5e-10 Score=91.51 Aligned_cols=104 Identities=15% Similarity=0.326 Sum_probs=79.7
Q ss_pred EEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC------------
Q psy8429 49 LRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF------------ 116 (314)
Q Consensus 49 I~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~------------ 116 (314)
..++.+.++.... ++..+++.|+++ ||++|+...|+++++++.+. +++.|..+++
T Consensus 15 ~~~~g~~~~~~~~---~gk~~lv~f~~~----~C~~C~~~~~~l~~l~~~~~------~~~~~~~v~~~~~~~~~~~~~~ 81 (148)
T 2b5x_A 15 AWLNGEVTREQLI---GEKPTLIHFWSI----SCHLCKEAMPQVNEFRDKYQ------DQLNVVAVHMPRSEDDLDPGKI 81 (148)
T ss_dssp EEESCCCCHHHHT---TTSCEEEEEECT----TCHHHHHHHHHHHHHHHHHT------TTSEEEEEECCCSTTTSSHHHH
T ss_pred ccccCcccchhhc---CCCEEEEEEEcC----CCHHHHHHhHHHHHHHHHhc------CCcEEEEEEcCCCccccCHHHH
Confidence 3556666554432 234689999999 99999999999999999886 2388888885
Q ss_pred ---------------CCCcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 117 ---------------DEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 117 ---------------~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
+++.++.++|+++++|+++++.++|+. .....+..+.+++.++|++.+.
T Consensus 82 ~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i-----~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 82 KETAAEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQL-----RHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp HHHHHHTTCCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBE-----EEEEESCSTTHHHHHHHHHHHT
T ss_pred HHHHHHcCCCcceEECCchhHHHHhCCCCCCEEEEECCCCcE-----EEEecCCCCHHHHHHHHHHHHh
Confidence 446789999999999999999665543 1222456788999999988765
No 124
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.11 E-value=3.8e-10 Score=90.12 Aligned_cols=86 Identities=16% Similarity=0.274 Sum_probs=71.8
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC----------------------CcchHH
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE----------------------GSDVFQ 124 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~----------------------~~~lf~ 124 (314)
..+++.|+++ ||++|+...|+++++++.+. ++.|+.+|+++ +.++.+
T Consensus 25 k~~lv~f~~~----~C~~C~~~~~~l~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 93 (136)
T 1lu4_A 25 KPAVLWFWTP----WCPFCNAEAPSLSQVAAANP-------AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWA 93 (136)
T ss_dssp SCEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHH
T ss_pred CEEEEEEECC----cChhHHHHHHHHHHHHHHCC-------CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHH
Confidence 4689999999 99999999999999998873 58899999987 688999
Q ss_pred hCCcccCceEEEecCCCCCCCCCccceee---cccCHHHHHHHHHhhc
Q psy8429 125 MLRLNTAPIFMHFPAKGKPKPSDTLDIQR---VGYSAEAIVKWIADRT 169 (314)
Q Consensus 125 ~~~v~svPtl~~f~p~~~~~~~~~~~~~~---~~~~a~~l~~fI~~~~ 169 (314)
+++++++|+++++.++|+. . ... |..+.+++.++|++.+
T Consensus 94 ~~~i~~~P~~~lid~~G~i-----~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 94 RYNVPWQPAFVFYRADGTS-----T-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp HTTCCSSSEEEEECTTSCE-----E-EECCSSSCCCHHHHHHHHHHC-
T ss_pred hcCCCCCCEEEEECCCCcE-----E-EEEcCCCccCHHHHHHHHHHHh
Confidence 9999999999999766543 1 223 5678999999998764
No 125
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.09 E-value=7.2e-11 Score=99.67 Aligned_cols=104 Identities=14% Similarity=0.220 Sum_probs=72.9
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcc-hHHhCCc--cc
Q psy8429 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD-VFQMLRL--NT 130 (314)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~-lf~~~~v--~s 130 (314)
++++.... ++.+++|.|||+ ||++|+.+.|.++++++.+. .++.|+.+|++++++ +.+++++ ++
T Consensus 37 ~~~~~~~~---~~k~vlv~F~a~----WC~~C~~~~p~l~~~~~~~~------~~~~~~~v~~d~~~~~~~~~~~~~~~~ 103 (164)
T 1sen_A 37 DGKKEAAA---SGLPLMVIIHKS----WCGACKALKPKFAESTEISE------LSHNFVMVNLEDEEEPKDEDFSPDGGY 103 (164)
T ss_dssp HHHHHHHH---HTCCEEEEEECT----TCHHHHHHHHHHHTCHHHHH------HHTTSEEEEEEGGGSCSCGGGCTTCSC
T ss_pred HHHHHHHh---cCCeEEEEEECC----CCHHHHHHHHHHHHHHHHhh------cCCeEEEEEecCCchHHHHHhcccCCc
Confidence 45555543 234699999999 99999999999999887654 246688888888776 7888998 66
Q ss_pred CceEEEecCCCCCCCC-Cccc----eeecccCHHHHHHHHHhhcC
Q psy8429 131 APIFMHFPAKGKPKPS-DTLD----IQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 131 vPtl~~f~p~~~~~~~-~~~~----~~~~~~~a~~l~~fI~~~~~ 170 (314)
+||+++|.++|+.... ...+ +.....+++++.++|++.+.
T Consensus 104 ~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 104 IPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp SSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHHH
Confidence 9999999544443210 0000 00013678999999987654
No 126
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.07 E-value=5.9e-10 Score=89.84 Aligned_cols=87 Identities=14% Similarity=0.263 Sum_probs=72.1
Q ss_pred CCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC-------------------------C
Q psy8429 65 RNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------------------------G 119 (314)
Q Consensus 65 r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~-------------------------~ 119 (314)
++..+++.|+++ ||++|+...|.++++++.+.. +++.|..+++++ +
T Consensus 33 ~gk~~ll~f~~~----~C~~C~~~~~~l~~~~~~~~~-----~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~ 103 (145)
T 3erw_A 33 KGQKTILHFWTS----WCPPCKKELPQFQSFYDAHPS-----DSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSK 103 (145)
T ss_dssp TTSEEEEEEECS----SCHHHHHHHHHHHHHHHHCCC-----SSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSS
T ss_pred CCCEEEEEEECC----CCHHHHHHHHHHHHHHHHcCC-----CCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCc
Confidence 566799999999 999999999999999998852 469999999964 6
Q ss_pred cchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHH
Q psy8429 120 SDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWI 165 (314)
Q Consensus 120 ~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI 165 (314)
.++.++|+++++|+++++.++|+. .....|..+.+++.++|
T Consensus 104 ~~~~~~~~v~~~P~~~lid~~G~i-----~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 104 GELMKEYHIITIPTSFLLNEKGEI-----EKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp SHHHHHTTCCEESEEEEECTTCCE-----EEEEESCCCHHHHHHHH
T ss_pred hhHHHhcCcCccCeEEEEcCCCcE-----EEEEcCCcCHHHHHHhh
Confidence 789999999999999999665543 12235677899999887
No 127
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.07 E-value=9.2e-10 Score=87.55 Aligned_cols=87 Identities=18% Similarity=0.252 Sum_probs=71.6
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC-----------------------CcchH
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-----------------------GSDVF 123 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~-----------------------~~~lf 123 (314)
..+++.|+++ ||++|+...|+++++++.+. ++.|+.+|+++ +.++.
T Consensus 26 k~~ll~f~~~----~C~~C~~~~~~l~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 94 (136)
T 1zzo_A 26 KPAVLWFWAP----WCPTCQGEAPVVGQVAASHP-------EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVW 94 (136)
T ss_dssp SCEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHH
T ss_pred CeEEEEEEcC----CChhHHHHHHHHHHHHHHcC-------CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHH
Confidence 4589999999 99999999999999998873 58888888854 67899
Q ss_pred HhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
++++++++|+++++.++|+. . ...|..+.+++.++|++.++
T Consensus 95 ~~~~i~~~P~~~~id~~g~i-----~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 95 ANFGVTQQPAYAFVDPHGNV-----D-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp HHTTCCSSSEEEEECTTCCE-----E-EEESCCCHHHHHHHHHHHC-
T ss_pred HHcCCCCCceEEEECCCCCE-----E-EEecCCCHHHHHHHHHHHhc
Confidence 99999999999999776543 1 22466789999999988764
No 128
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.05 E-value=6.6e-10 Score=91.28 Aligned_cols=92 Identities=9% Similarity=0.048 Sum_probs=74.4
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC------------------------Ccc
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE------------------------GSD 121 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~------------------------~~~ 121 (314)
+..++|.|+|+ ||++|+...|+++++++.+.. +++.|..+++|+ ..+
T Consensus 24 gk~vlv~F~a~----wC~~C~~~~~~l~~l~~~~~~-----~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (151)
T 3raz_A 24 APVRIVNLWAT----WCGPCRKEMPAMSKWYKAQKK-----GSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRN 94 (151)
T ss_dssp SSEEEEEEECT----TCHHHHHHHHHHHHHHHTSCT-----TTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHH
T ss_pred CCEEEEEEEcC----cCHHHHHHHHHHHHHHHHhcc-----CCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHH
Confidence 45789999999 999999999999999998852 569999999872 356
Q ss_pred hHHhCC--cccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCC
Q psy8429 122 VFQMLR--LNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (314)
Q Consensus 122 lf~~~~--v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~ 171 (314)
+.++|+ ++++|+.+++.++|+.. ....|..+.+++.++|++....
T Consensus 95 ~~~~~~~~v~~~P~~~lid~~G~i~-----~~~~g~~~~~~l~~~l~~l~~~ 141 (151)
T 3raz_A 95 FMKTYGNTVGVLPFTVVEAPKCGYR-----QTITGEVNEKSLTDAVKLAHSK 141 (151)
T ss_dssp HHHTTTCCSCCSSEEEEEETTTTEE-----EECCSCCCHHHHHHHHHHHHTC
T ss_pred HHHHhCCccCCCCEEEEECCCCcEE-----EEECCCCCHHHHHHHHHHHHHH
Confidence 788899 99999999997765531 2224677899999999887653
No 129
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.05 E-value=9.3e-10 Score=89.96 Aligned_cols=93 Identities=12% Similarity=0.164 Sum_probs=75.6
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCc-----------------------ch
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS-----------------------DV 122 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~-----------------------~l 122 (314)
+..+++.|+++ ||++|+...|+++++++.+.. .++.|+.+++++++ ++
T Consensus 30 gk~~lv~f~~~----~C~~C~~~~~~l~~l~~~~~~-----~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 100 (152)
T 2lja_A 30 GKYIYIDVWAT----WCGPCRGELPALKELEEKYAG-----KDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTF 100 (152)
T ss_dssp TSEEEEEECCS----SCCGGGGTHHHHHHHHHHSTT-----SSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHH
T ss_pred CCEEEEEEECC----cCHhHHHHhHHHHHHHHHhcc-----CCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhH
Confidence 44689999999 999999999999999998752 45999999998864 78
Q ss_pred HHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 123 f~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
.++|+++++|+++++.+.|+.. ....+..+.+++.++|++..+-+
T Consensus 101 ~~~~~v~~~P~~~lid~~G~i~-----~~~~g~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 101 MDAYLINGIPRFILLDRDGKII-----SANMTRPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp HHHTTCCSSCCEEEECTTSCEE-----ESSCCCTTCHHHHHHHHHHHTCC
T ss_pred HHHcCcCCCCEEEEECCCCeEE-----EccCCCCCHHHHHHHHHHHhccc
Confidence 9999999999999998765431 11235567899999999887643
No 130
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.05 E-value=8.9e-10 Score=91.18 Aligned_cols=93 Identities=15% Similarity=0.138 Sum_probs=75.6
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhC-------------------
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML------------------- 126 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~------------------- 126 (314)
+..+++.|+++ ||++|+...|+++++++.+.. .++.|+.++++++++..+++
T Consensus 34 gk~vlv~f~~~----~C~~C~~~~~~l~~l~~~~~~-----~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (165)
T 3or5_A 34 GKAYIVNFFAT----WCPPCRSEIPDMVQVQKTWAS-----RGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIR 104 (165)
T ss_dssp TCEEEEEEECT----TSHHHHHHHHHHHHHHHHHTT-----TTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHH
T ss_pred CCEEEEEEEcC----cCHHHHHHHHHHHHHHHHhcc-----CCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHH
Confidence 34689999999 999999999999999999862 35999999999987777777
Q ss_pred --------CcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 127 --------RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 127 --------~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
+++++|+++++.++|+. .....+..+.+++.++|++.++..
T Consensus 105 ~~~~~~~~~i~~~P~~~lid~~G~i-----~~~~~g~~~~~~l~~~l~~~l~~~ 153 (165)
T 3or5_A 105 AFNGYIDGGITGIPTSFVIDASGNV-----SGVIVGPRSKADFDRIVKMALGAK 153 (165)
T ss_dssp HHHTTSTTCSCSSSEEEEECTTSBE-----EEEECSCCCHHHHHHHHHHHHC--
T ss_pred HHhhhhccCCCCCCeEEEECCCCcE-----EEEEcCCCCHHHHHHHHHHHHhhh
Confidence 89999999999766543 122246678999999999987644
No 131
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.05 E-value=1.1e-09 Score=89.64 Aligned_cols=93 Identities=12% Similarity=0.162 Sum_probs=75.2
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC----------------------CcchH
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE----------------------GSDVF 123 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~----------------------~~~lf 123 (314)
+..+++.|+++ ||++|+...|.++++++.+.. .++.|..+++++ +.++.
T Consensus 26 gk~vlv~F~~~----~C~~C~~~~~~l~~~~~~~~~-----~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 96 (151)
T 2f9s_A 26 GKGVFLNFWGT----WCEPCKKEFPYMANQYKHFKS-----QGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVL 96 (151)
T ss_dssp TSEEEEEEECT----TCHHHHHHHHHHHHHHHHHGG-----GTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHH
T ss_pred CCEEEEEEECC----CCHHHHHHHHHHHHHHHHhcc-----CCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHH
Confidence 34689999999 999999999999999999863 358899999876 45889
Q ss_pred HhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
++|+++++|+++++.+.|+. .....|..+.+++.++|++.+...
T Consensus 97 ~~~~v~~~P~~~lid~~G~i-----~~~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 97 DAYDVSPLPTTFLINPEGKV-----VKVVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp HHTTCCSSCEEEEECTTSEE-----EEEEESCCCHHHHHHHHHHHSCC-
T ss_pred HhcCCCCCCeEEEECCCCcE-----EEEEeCCCCHHHHHHHHHHHHhhh
Confidence 99999999999999665543 122246678999999999987644
No 132
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.04 E-value=1.1e-10 Score=97.85 Aligned_cols=94 Identities=9% Similarity=0.065 Sum_probs=63.1
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC-CCcchHHhCCcccCceEEEecCCCCCC
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-EGSDVFQMLRLNTAPIFMHFPAKGKPK 144 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~-~~~~lf~~~~v~svPtl~~f~p~~~~~ 144 (314)
+.+++|+|||+ ||++|+.++|++.+.++.... .+..|+.+|+| ++++...+++++++||+++|.++|+..
T Consensus 44 ~KpVlV~F~A~----WC~~Ck~m~p~~~~~~~~~~~-----~~~~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v 114 (151)
T 3ph9_A 44 KKPLMVIHHLE----DCQYSQALKKVFAQNEEIQEM-----AQNKFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVR 114 (151)
T ss_dssp TCCEEEEECCT----TCHHHHHHHHHHHHCHHHHHH-----HHHTCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSCBC
T ss_pred CCcEEEEEECC----CCHhHHHHHHHHhcCHHHHHH-----hhcCeEEEEecCCchhhHhhcCCCCCCEEEEECCCCCEE
Confidence 45699999999 999999999999875432110 01346667775 456788899999999999999665432
Q ss_pred CC-------CccceeecccCHHHHHHHHHhhcC
Q psy8429 145 PS-------DTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 145 ~~-------~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
.. ..|.. ...+.+++.+.+++.+.
T Consensus 115 ~~~~G~~~~~~~~~--~~~~~~~ll~~~~~al~ 145 (151)
T 3ph9_A 115 ADIAGRYSNRLYTY--EPRDLPLLIENMKKALR 145 (151)
T ss_dssp TTCCCSCTTSTTCC--CGGGHHHHHHHHHHHHS
T ss_pred EEEeCCcCCccccc--chhhHHHHHHHHHHHHH
Confidence 10 00111 12356777777776543
No 133
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.01 E-value=7.7e-10 Score=91.62 Aligned_cols=112 Identities=16% Similarity=0.204 Sum_probs=79.5
Q ss_pred CeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhcccc-----------------------
Q psy8429 47 AVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQ----------------------- 103 (314)
Q Consensus 47 ~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~----------------------- 103 (314)
.+..++.+.++.. ..++..+++.|+|+ ||++|+...|+++++++.+...+
T Consensus 22 ~l~~~~g~~~~~~---~~~gk~vlv~F~a~----~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~ 94 (164)
T 2h30_A 22 TMKTADNRPASVY---LKKDKPTLIKFWAS----WCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKW 94 (164)
T ss_dssp TCEETTSSBGGGG---CCTTSCEEEEECCT----TCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHH
T ss_pred ccCCCCCCEeeHH---HhCCCEEEEEEECC----CCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHH
Confidence 3455555554432 22345699999999 99999999999999998874310
Q ss_pred CCCCcEEEEEEECCCCcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 104 MYSNKLFFILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 104 ~~~~~v~F~~vD~~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
....++.++.++.+++.++.++|+++++|+++++.++|+. .....|..+.+++.++|++...
T Consensus 95 ~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i-----~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 95 YAGLNYPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDV-----QRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp HTTSCCTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCE-----EEEEESCCCHHHHHHHHHCTTC
T ss_pred HHhCCCCcceEEEcCchHHHHHcCCCccceEEEECCCCcE-----EEEEcCCCCHHHHHHHHHHHHH
Confidence 0001222345677778899999999999999999665543 1222466789999999998765
No 134
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.00 E-value=2.4e-09 Score=84.91 Aligned_cols=88 Identities=15% Similarity=0.220 Sum_probs=70.2
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC----------------------------C
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF----------------------------D 117 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~----------------------------~ 117 (314)
+.++++.|+++ ||++|+...|+++++++.+. +++.+..++. +
T Consensus 22 gk~~lv~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 91 (138)
T 4evm_A 22 GKKVYLKFWAS----WCSICLASLPDTDEIAKEAG------DDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVD 91 (138)
T ss_dssp TSEEEEEECCT----TCHHHHHHHHHHHHHHHTCT------TTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEEC
T ss_pred CCEEEEEEEcC----cCHHHHHHHHHHHHHHHHhC------CCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEEC
Confidence 34689999999 99999999999999998853 4688888853 4
Q ss_pred CCcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhh
Q psy8429 118 EGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 118 ~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~ 168 (314)
++.++.++|+++++|+++++.+.|+. .....+..+.+++.++|++.
T Consensus 92 ~~~~~~~~~~v~~~P~~~lid~~G~i-----~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 92 PSGKLLETYGVRSYPTQAFIDKEGKL-----VKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp TTCHHHHHTTCCSSSEEEEECTTCCE-----EEEEESCCCHHHHHHHHHHC
T ss_pred cchHHHHHcCcccCCeEEEECCCCcE-----EEeecCCCcHHHHHHHHHhh
Confidence 46689999999999999999666543 12234667899999998764
No 135
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.99 E-value=3e-09 Score=86.06 Aligned_cols=88 Identities=16% Similarity=0.189 Sum_probs=71.2
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHh-ccccCCCCcEEEEEEECCC-------------------------C
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSF-RYSQMYSNKLFFILVDFDE-------------------------G 119 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~-~~~~~~~~~v~F~~vD~~~-------------------------~ 119 (314)
+.++++.|+++ ||++|+...|+++++++.+ .. .++.|..++++. +
T Consensus 33 gk~vll~F~~~----~C~~C~~~~~~l~~l~~~~~~~-----~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~ 103 (148)
T 3fkf_A 33 NRYLLLNFWAS----WCDPQPEANAELKRLNKEYKKN-----KNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLS 103 (148)
T ss_dssp TSEEEEEEECG----GGCCCHHHHHHHHHHHHHTTTC-----TTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGG
T ss_pred CcEEEEEEECC----CCHHHHHHhHHHHHHHHHhcCC-----CCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcc
Confidence 44689999999 9999999999999999998 42 359999998887 4
Q ss_pred cchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 120 SDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 120 ~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
.++.++|+++++|+++++.++|+.. . ...+.+++.++|++.+.
T Consensus 104 ~~~~~~~~v~~~P~~~lid~~G~i~-----~---~~~~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 104 SETAKQYAILTLPTNILLSPTGKIL-----A---RDIQGEALTGKLKELLK 146 (148)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSBEE-----E---ESCCHHHHHHHHHHHC-
T ss_pred hHHHHhcCCCCcCEEEEECCCCeEE-----E---ecCCHHHHHHHHHHHHc
Confidence 5899999999999999996665431 1 11278999999988764
No 136
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.98 E-value=1.6e-09 Score=87.70 Aligned_cols=89 Identities=7% Similarity=0.021 Sum_probs=70.7
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcc------------------------
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD------------------------ 121 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~------------------------ 121 (314)
+..+++.|+++ ||++|+...|+++++++.+.. .++.|..++++++++
T Consensus 31 gk~vll~f~~~----~C~~C~~~~~~l~~l~~~~~~-----~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 101 (148)
T 3hcz_A 31 AKYTILFFWDS----QCGHCQQETPKLYDWWLKNRA-----KGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHT 101 (148)
T ss_dssp CSEEEEEEECG----GGCTTCSHHHHHHHHHHHHGG-----GTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCC
T ss_pred CCEEEEEEECC----CCccHHHHHHHHHHHHHHhcc-----CCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccch
Confidence 45689999999 999999999999999999863 359999999998877
Q ss_pred -hHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhh
Q psy8429 122 -VFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 122 -lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~ 168 (314)
+.++|+++++|+++++.++|+.. ....+..+.+++.+.+.+.
T Consensus 102 ~~~~~~~i~~~P~~~lid~~G~i~-----~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 102 DFKITYDIYATPVLYVLDKNKVII-----AKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp CHHHHHCCCSSCEEEEECTTCBEE-----EESCCGGGHHHHHHHHHHH
T ss_pred hHHHhcCcCCCCEEEEECCCCcEE-----EecCCHHHHHHHHHHHHHH
Confidence 99999999999999997665431 1113445566666666554
No 137
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.98 E-value=1.8e-09 Score=87.38 Aligned_cols=88 Identities=13% Similarity=0.241 Sum_probs=69.4
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHH---HHHHhccccCCCCcEEEEEEECCCCcch--------------------
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTI---VANSFRYSQMYSNKLFFILVDFDEGSDV-------------------- 122 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~---vA~s~~~~~~~~~~v~F~~vD~~~~~~l-------------------- 122 (314)
+.++++.|+|+ ||++|+...|++++ +++.+.. .++.+..++.+++++.
T Consensus 27 gk~vll~F~a~----~C~~C~~~~~~l~~~~~l~~~~~~-----~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~ 97 (142)
T 3ewl_A 27 AQYTMLFFYDP----DCSNCRKFEKLFAEIPAFVEMVEN-----GTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAG 97 (142)
T ss_dssp CSEEEEEECCS----SCHHHHHHHHHHHTCHHHHHHHHH-----TSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTC
T ss_pred CCEEEEEEECC----CCccHHHHHHHHHHhHHHHHHhcc-----CCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCcc
Confidence 45799999999 99999999999998 8888763 3599999999876554
Q ss_pred ----HHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 123 ----FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 123 ----f~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
.+.|+++++|+++++.+.|+.. .+..+.+++.++|++..+
T Consensus 98 ~~~~~~~~~v~~~P~~~lid~~G~i~--------~~~~~~~~l~~~l~~~~~ 141 (142)
T 3ewl_A 98 DIRTRQLYDIRATPTIYLLDGRKRVI--------LKDTSMEQLIDYLATQAG 141 (142)
T ss_dssp HHHHTTCSCCCSSSEEEEECTTCBEE--------ECSCCHHHHHHHHHC---
T ss_pred chhhHHHcCCCCCCeEEEECCCCCEE--------ecCCCHHHHHHHHHHHcc
Confidence 3489999999999997765431 245789999999988754
No 138
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.97 E-value=3.1e-09 Score=86.79 Aligned_cols=93 Identities=14% Similarity=0.121 Sum_probs=73.1
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCc----------------------chH
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS----------------------DVF 123 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~----------------------~lf 123 (314)
+..+++.|+++ ||++|+...|.++++++.+.. .++.+..++++.++ ++.
T Consensus 28 gk~vll~f~~~----~C~~C~~~~~~l~~l~~~~~~-----~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 98 (152)
T 3gl3_A 28 GSVVYLDFWAS----WCGPCRQSFPWMNQMQAKYKA-----KGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTP 98 (152)
T ss_dssp TSEEEEEEECT----TCTHHHHHHHHHHHHHHHHGG-----GTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHH
T ss_pred CCEEEEEEECC----cCHHHHHHHHHHHHHHHHhhc-----CCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhH
Confidence 34689999999 999999999999999999863 34889999988755 678
Q ss_pred HhCCcccCceEEEecCCCCCCCCCccceeec--ccCHHHHHHHHHhhcCCc
Q psy8429 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRV--GYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~--~~~a~~l~~fI~~~~~~~ 172 (314)
++|+++++|+++++.+.|+.. +.. .+ +.+.+++.++|++.++..
T Consensus 99 ~~~~v~~~P~~~lid~~G~i~----~~~-~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 99 RLYGVKGMPTSFLIDRNGKVL----LQH-VGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp HHTTCCSSSEEEEECTTSBEE----EEE-ESCCTTTHHHHHHHHHHHTC--
T ss_pred HHcCCCCCCeEEEECCCCCEE----EEE-ccCCCcCHHHHHHHHHHHHccc
Confidence 899999999999997665431 111 23 346799999999987744
No 139
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.96 E-value=3.6e-09 Score=87.14 Aligned_cols=91 Identities=13% Similarity=0.149 Sum_probs=72.8
Q ss_pred CccEEEEEeeCCCCCCCccchh-hHHHHHHHHHHhccccCCCCcEEEEEEEC----------------------------
Q psy8429 66 NYSAIVMFTALAPQRNCHICVS-ASDEYTIVANSFRYSQMYSNKLFFILVDF---------------------------- 116 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~-~~pefe~vA~s~~~~~~~~~~v~F~~vD~---------------------------- 116 (314)
+..++|.|+|+ ||++|+. ..|.++++++.+.. +++.|..+++
T Consensus 30 gk~vlv~F~a~----~C~~C~~e~~~~l~~l~~~~~~-----~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (160)
T 3lor_A 30 GKVVVVEVFQM----LCPGCVNHGVPQAQKIHRMIDE-----SQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAV 100 (160)
T ss_dssp TSEEEEEEECT----TCHHHHHTHHHHHHHHHHHSCT-----TTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEE
T ss_pred CCEEEEEEEcC----CCcchhhhhhHHHHHHHHHhCc-----CCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEE
Confidence 34699999999 9999999 69999999999863 3588888886
Q ss_pred CCCcc------hHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 117 DEGSD------VFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 117 ~~~~~------lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
+...+ +.++|+++++|+.+++.+.|+.. ....|..+.+++.+.|++.+.
T Consensus 101 d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~-----~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 101 DMPREGQRIPSTMKKYRLEGTPSIILADRKGRIR-----QVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp ECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEE-----EEEESCCCHHHHHHHHHHHHT
T ss_pred CCccccchhhhHHHhcccCccceEEEECCCCcEE-----EEecCcCCHHHHHHHHHHHHh
Confidence 33344 89999999999999998765531 222467789999999998765
No 140
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.96 E-value=5.4e-09 Score=85.44 Aligned_cols=92 Identities=16% Similarity=0.138 Sum_probs=72.7
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEE-----------------------CCCCcchH
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVD-----------------------FDEGSDVF 123 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD-----------------------~~~~~~lf 123 (314)
..+++.|+++ ||++|+...|+++++++.+.. .++.+..++ .+.+.++.
T Consensus 29 k~~lv~f~~~----~C~~C~~~~~~l~~l~~~~~~-----~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 99 (153)
T 2l5o_A 29 KVTLINFWFP----SCPGCVSEMPKIIKTANDYKN-----KNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVG 99 (153)
T ss_dssp CEEEEEEECT----TCTTHHHHHHHHHHHHHHGGG-----TTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHH
T ss_pred CEEEEEEECC----CCccHHHHHHHHHHHHHHhcc-----CCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHH
Confidence 4689999999 999999999999999999863 346666554 45577899
Q ss_pred HhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 124 QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
+.|+++++|+++++.++|+.. ....|..+.+++.++|++.+...
T Consensus 100 ~~~~i~~~P~~~lid~~G~i~-----~~~~g~~~~~~l~~~l~~ll~~~ 143 (153)
T 2l5o_A 100 QAFGTQVYPTSVLIGKKGEIL-----KTYVGEPDFGKLYQEIDTAWRNS 143 (153)
T ss_dssp HHHTCCSSSEEEEECSSSCCC-----EEEESSCCHHHHHHHHHHHHHCC
T ss_pred HHcCCCccCeEEEECCCCcEE-----EEEcCCCCHHHHHHHHHHHHHhh
Confidence 999999999999997665432 22246678999999999876533
No 141
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.95 E-value=3.2e-09 Score=87.21 Aligned_cols=88 Identities=15% Similarity=0.146 Sum_probs=70.4
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC-------------------------Ccc
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------------------------GSD 121 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~-------------------------~~~ 121 (314)
..+++.|+++ ||++|+...|+++++++.+.. .++.+..+++++ +.+
T Consensus 30 k~vll~F~a~----~C~~C~~~~~~l~~l~~~~~~-----~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 100 (152)
T 2lrn_A 30 KYVLVDFWFA----GCSWCRKETPYLLKTYNAFKD-----KGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKD 100 (152)
T ss_dssp SEEEEEEECT----TCTTHHHHHHHHHHHHHHHTT-----TTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHH
T ss_pred CEEEEEEECC----CChhHHHHHHHHHHHHHHhcc-----CCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHH
Confidence 4689999999 999999999999999999862 359999999997 578
Q ss_pred hHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCC
Q psy8429 122 VFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (314)
Q Consensus 122 lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~ 171 (314)
+.++|+++++|+++++.++|+.. . ...+.+++.++|++..+.
T Consensus 101 ~~~~~~v~~~P~~~lid~~G~i~-----~---~~~~~~~l~~~l~~l~~~ 142 (152)
T 2lrn_A 101 VLESYCIVGFPHIILVDPEGKIV-----A---KELRGDDLYNTVEKFVNG 142 (152)
T ss_dssp HHHHTTCCSSCEEEEECTTSEEE-----E---ECCCTTHHHHHHHHHHTS
T ss_pred HHHHhCCCcCCeEEEECCCCeEE-----E---eeCCHHHHHHHHHHHHhh
Confidence 89999999999999996655431 1 113456788888777653
No 142
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.95 E-value=1.1e-09 Score=108.66 Aligned_cols=133 Identities=11% Similarity=0.072 Sum_probs=96.0
Q ss_pred CeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhC
Q psy8429 47 AVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML 126 (314)
Q Consensus 47 ~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~ 126 (314)
.-.+++++.++++. +...+ ..++.|+++ ||++|+.+.|.++++|..+ +++.|.++|.++++++.+++
T Consensus 100 ~~~~~~~~~~~~i~-~~~~~-~~i~~f~a~----~C~~C~~~~~~l~~~a~~~-------~~v~~~~vd~~~~~~~~~~~ 166 (521)
T 1hyu_A 100 HPSKEAQSLLEQIR-DIDGD-FEFETYYSL----SCHNCPDVVQALNLMAVLN-------PRIKHTAIDGGTFQNEITER 166 (521)
T ss_dssp CCCCSCHHHHHHHH-HCCSC-EEEEEEECT----TCSSHHHHHHHHHHHHHHC-------TTEEEEEEETTTCHHHHHHT
T ss_pred CCCCCCHHHHHHHH-hcCCC-cceEEEECC----CCcCcHHHHHHHHHHHhHc-------CceEEEEEechhhHHHHHHh
Confidence 34678998888874 33323 468899999 9999999999999999875 36999999999999999999
Q ss_pred CcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc--ceeeCCCCCchhHHHHHHHHHHHHHHhhhhc
Q psy8429 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ--IRVFRPPNYSGPMAFIMLFAIVAVFLYVKRN 203 (314)
Q Consensus 127 ~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~--i~i~~p~~~~~~~~~~~~~~~~~~~~~~~k~ 203 (314)
+++++|++++ +| +. . ..+..+.+++.+|+.+..... -....+..+ ..++++.+.+++.++..+++.
T Consensus 167 ~i~svPt~~i--~g-~~-----~--~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~~~-dVvIIGgG~AGl~aA~~la~~ 234 (521)
T 1hyu_A 167 NVMGVPAVFV--NG-KE-----F--GQGRMTLTEIVAKVDTGAEKRAAEALNKRDAY-DVLIVGSGPAGAAAAVYSARK 234 (521)
T ss_dssp TCCSSSEEEE--TT-EE-----E--EESCCCHHHHHHHHCCSSCCHHHHHHHTSCCE-EEEEECCSHHHHHHHHHHHHT
T ss_pred CCCccCEEEE--CC-EE-----E--ecCCCCHHHHHHHHhhcccccccccccccCcc-cEEEECCcHHHHHHHHHHHhC
Confidence 9999999987 43 32 1 236678899999987653321 112223333 444555566666656666554
No 143
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.94 E-value=4.1e-09 Score=87.24 Aligned_cols=93 Identities=18% Similarity=0.218 Sum_probs=73.7
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC-------------------CcchHHhC
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------------------GSDVFQML 126 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~-------------------~~~lf~~~ 126 (314)
+..+++.|+++ ||++|+...|.++++++.+.+ +++.|+.++.++ +.++.++|
T Consensus 41 gk~vll~F~~~----~C~~C~~~~~~l~~~~~~~~~-----~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 111 (158)
T 3hdc_A 41 GKIVLVNFWAS----WCPYCRDEMPSMDRLVKSFPK-----GDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRY 111 (158)
T ss_dssp TSEEEEEEECT----TCHHHHHHHHHHHHHHHHSST-----TSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHT
T ss_pred CCEEEEEEECC----cCHHHHHHHHHHHHHHHHccc-----CCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHh
Confidence 34689999999 999999999999999999863 469999999987 78999999
Q ss_pred CcccCceEEEecCCCCCCCCCccceeec--ccCHHHHHHHHHhhcCCc
Q psy8429 127 RLNTAPIFMHFPAKGKPKPSDTLDIQRV--GYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 127 ~v~svPtl~~f~p~~~~~~~~~~~~~~~--~~~a~~l~~fI~~~~~~~ 172 (314)
+++++|+++++.++|+.. ....| ..+.+++.+.++++.+.+
T Consensus 112 ~v~~~P~~~lid~~G~i~-----~~~~G~~~~~~~~~~~~~~~~~~~~ 154 (158)
T 3hdc_A 112 GANRLPDTFIVDRKGIIR-----QRVTGGIEWDAPKVVSYLKSLEGHH 154 (158)
T ss_dssp TCCSSSEEEEECTTSBEE-----EEEESCCCTTSHHHHHHHHTTC---
T ss_pred CCCCcceEEEEcCCCCEE-----EEEeCCCccchHHHHHHHHhhcccc
Confidence 999999999887765531 11123 356788999998887643
No 144
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.93 E-value=4.8e-09 Score=86.33 Aligned_cols=92 Identities=12% Similarity=0.066 Sum_probs=72.8
Q ss_pred CccEEEEEeeCCCCCCCccchhh-HHHHHHHHHHhccccCCCCcEEEEEEECC---------------------------
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSA-SDEYTIVANSFRYSQMYSNKLFFILVDFD--------------------------- 117 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~-~pefe~vA~s~~~~~~~~~~v~F~~vD~~--------------------------- 117 (314)
+..+++.|+|+ ||++|+.. .|.++++++.+.. +++.|..++++
T Consensus 28 gk~vlv~f~a~----wC~~C~~~~~~~l~~l~~~~~~-----~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (158)
T 3eyt_A 28 GKVIVIEAFQM----LCPGCVMHGIPLAQKVRAAFPE-----DKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGV 98 (158)
T ss_dssp TSEEEEEEECT----TCHHHHHTHHHHHHHHHHHSCT-----TTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEE
T ss_pred CCEEEEEEECC----cCcchhhhhhHHHHHHHHHhCc-----CCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEE
Confidence 44789999999 99999996 9999999999862 45888888863
Q ss_pred -CCc-----chHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCC
Q psy8429 118 -EGS-----DVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (314)
Q Consensus 118 -~~~-----~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~ 171 (314)
... ++.+.|+++++|+.+++.+.|+.. ....+..+.+++.+.|++.+..
T Consensus 99 d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~-----~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 99 DQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLR-----AHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp ECCCSSSSCHHHHHTTCCSSSEEEEECTTSEEE-----EEEESCCCHHHHHHHHHHHHTS
T ss_pred cCccchhhHHHHHHcCCCCCCEEEEECCCCCEE-----EEEeCCCCHHHHHHHHHHHhcc
Confidence 222 589999999999999997765431 2224667899999999988763
No 145
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.91 E-value=1.7e-08 Score=89.24 Aligned_cols=120 Identities=14% Similarity=0.219 Sum_probs=91.9
Q ss_pred HHHHHHHhhhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEE
Q psy8429 34 DRVLHLSEMNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFIL 113 (314)
Q Consensus 34 ~~~~~L~~l~~~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~ 113 (314)
+.+.+..+...-+-|.++|.+|++++.. .+.+ ..+++|+.+ ||+.|.++.+.|+++|+.+. +++.|+.
T Consensus 101 ~~l~~fi~~~~~plv~e~t~~n~~~~~~-~~~~-~~~l~f~~~----~~~~~~~~~~~~~~vAk~~k------~~i~F~~ 168 (227)
T 4f9z_D 101 TKLSRFIEINSLHMVTEYNPVTVIGLFN-SVIQ-IHLLLIMNK----ASPEYEENMHRYQKAAKLFQ------GKILFIL 168 (227)
T ss_dssp HHHHHHHHHHCCCSEEECCHHHHHHHHH-SSCC-EEEEEEECT----TSTTHHHHHHHHHHHHHHTT------TTCEEEE
T ss_pred HHHHHHHHHhCCCceeecCcccHHHHhc-cCCc-eEEEEEEcC----CcchHHHHHHHHHHHHHHhh------CCEEEEE
Confidence 4444444433334599999999999874 4333 455678787 99999999999999999987 5699999
Q ss_pred EECCC--CcchHHhCCcc--cCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 114 VDFDE--GSDVFQMLRLN--TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 114 vD~~~--~~~lf~~~~v~--svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
+|.++ ++...+.+|++ ..|++.++..++. ..|....+..+++.|.+|+++..
T Consensus 169 vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~----~ky~~~~~~~t~~~i~~Fv~~~~ 224 (227)
T 4f9z_D 169 VDSGMKENGKVISFFKLKESQLPALAIYQTLDD----EWDTLPTAEVSVEHVQNFCDGFL 224 (227)
T ss_dssp EETTSGGGHHHHHHTTCCGGGCSEEEEEESSSC----CEEEETTCCCCHHHHHHHHHHHH
T ss_pred eCCccHhHHHHHHHcCCCcccCCEEEEEECCCC----ccccCCcCCCCHHHHHHHHHHHh
Confidence 99974 67889999998 8999999986521 12433335679999999998764
No 146
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.91 E-value=4.4e-09 Score=85.38 Aligned_cols=85 Identities=13% Similarity=0.205 Sum_probs=68.3
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHH---HHHHhccccCCCCcEEEEEEECCCCcc---------------------
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTI---VANSFRYSQMYSNKLFFILVDFDEGSD--------------------- 121 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~---vA~s~~~~~~~~~~v~F~~vD~~~~~~--------------------- 121 (314)
..++++.|||+ ||++|+...|++++ +.+.+.. +++.+..++.+++++
T Consensus 31 gk~vll~F~a~----wC~~C~~~~~~l~~~~~l~~~~~~-----~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~ 101 (142)
T 3eur_A 31 AEYTLLFINNP----GCHACAEMIEGLKASPVINGFTAA-----KKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKEL 101 (142)
T ss_dssp CSEEEEEECCS----SSHHHHHHHHHHHHCHHHHHHHHT-----TSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTC
T ss_pred CCEEEEEEECC----CCccHHHHHHHHhhhHHHHHHhcc-----CCeEEEEEEcCCCHHHHHHHHHhcccccccccCccc
Confidence 45689999999 99999999999999 9988863 468999999988643
Q ss_pred ---hHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHh
Q psy8429 122 ---VFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIAD 167 (314)
Q Consensus 122 ---lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~ 167 (314)
+.+.|+++++|+++++.+.|+.. ....+.+++.+||++
T Consensus 102 ~~~~~~~~~v~~~P~~~lid~~G~i~--------~~~~~~~~l~~~l~e 142 (142)
T 3eur_A 102 VIKNKNLYDLRAIPTLYLLDKNKTVL--------LKDATLQKVEQYLAE 142 (142)
T ss_dssp HHHHTTCSCCTTCSEEEEECTTCBEE--------EEEECHHHHHHHHHC
T ss_pred hhhhhhhcCCCcCCeEEEECCCCcEE--------ecCCCHHHHHHHHhC
Confidence 47789999999999998765431 123457899998864
No 147
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.90 E-value=4.3e-09 Score=86.26 Aligned_cols=89 Identities=17% Similarity=0.181 Sum_probs=72.6
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC---------------------------CCC
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF---------------------------DEG 119 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~---------------------------~~~ 119 (314)
.++++.|+++ ||++|+...|.++++++.+ ++.|..+++ +++
T Consensus 31 k~vll~f~~~----~C~~C~~~~~~l~~l~~~~--------~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 98 (154)
T 3ia1_A 31 KPAVIVFWAS----WCTVCKAEFPGLHRVAEET--------GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRP 98 (154)
T ss_dssp SSEEEEEECT----TCHHHHHHHHHHHHHHHHH--------CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCH
T ss_pred CeEEEEEEcc----cChhHHHHHHHHHHHHHHc--------CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccch
Confidence 4689999999 9999999999999999987 266777777 356
Q ss_pred cchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 120 SDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 120 ~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
.++.++|+++++|+++++.+.|+. .....+..+.+++.++|++.++-+
T Consensus 99 ~~~~~~~~v~~~P~~~lid~~G~i-----~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 99 HEVAARFKVLGQPWTFVVDREGKV-----VALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp HHHHTTSSBCSSCEEEEECTTSEE-----EEEEESBCCHHHHHHHHHHTTCCC
T ss_pred HHHHHHhCCCcccEEEEECCCCCE-----EEEEcCCCCHHHHHHHHHhccCcc
Confidence 788999999999999999766543 122346678999999999987743
No 148
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.88 E-value=5.7e-10 Score=103.09 Aligned_cols=75 Identities=12% Similarity=0.058 Sum_probs=56.6
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC-CCCcchHHhCCcccCceEEEecCCCCCCCCCc
Q psy8429 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF-DEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDT 148 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~-~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~ 148 (314)
+++|+|+ ||+||++++|+|+++|+.+. ++.+.++|. +++++++++++++++||+++ +| + .
T Consensus 201 vV~F~A~----WC~~Ck~l~p~le~lA~~l~-------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G-~-----~ 261 (291)
T 3kp9_A 201 GTMYGAY----WCPHCQDQKELFGAAFDQVP-------YVECSPNGPGTPQAQECTEAGITSYPTWII--NG-R-----T 261 (291)
T ss_dssp CEEEECT----TCHHHHHHHHHHGGGGGGSC-------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TT-E-----E
T ss_pred EEEEECC----CCHHHHHHHHHHHHHHHHcC-------EEEEeecCchhhHHHHHHHcCCcccCeEEE--CC-E-----E
Confidence 6899999 99999999999999986541 122222222 33899999999999999654 43 2 1
Q ss_pred cceeecccCHHHHHHHHH
Q psy8429 149 LDIQRVGYSAEAIVKWIA 166 (314)
Q Consensus 149 ~~~~~~~~~a~~l~~fI~ 166 (314)
..|.++.+++.+|++
T Consensus 262 ---~~G~~~~~~L~~~l~ 276 (291)
T 3kp9_A 262 ---YTGVRSLEALAVASG 276 (291)
T ss_dssp ---EESCCCHHHHHHHTC
T ss_pred ---ecCCCCHHHHHHHHC
Confidence 257889999999974
No 149
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.86 E-value=1.2e-08 Score=84.71 Aligned_cols=88 Identities=15% Similarity=0.205 Sum_probs=71.7
Q ss_pred CCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC------------------CC-------
Q psy8429 65 RNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD------------------EG------- 119 (314)
Q Consensus 65 r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~------------------~~------- 119 (314)
++..+++.|+++ ||++|+...|+++++++.+. ++.|..++++ ++
T Consensus 36 ~gk~~lv~F~~~----~C~~C~~~~~~l~~l~~~~~-------~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (165)
T 3ha9_A 36 GGDVVILWFMAA----WCPSCVYMADLLDRLTEKYR-------EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKF 104 (165)
T ss_dssp CSSEEEEEEECT----TCTTHHHHHHHHHHHHHHCT-------TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHH
T ss_pred CCCEEEEEEECC----CCcchhhhHHHHHHHHHHcC-------CcEEEEEEecccccccccccccccCCCCCCHHHHHHH
Confidence 445789999999 99999999999999998873 5899999988 44
Q ss_pred ---------------cchHHhCCcccCceEEEecCCCCCCCCCccceeeccc-CHHHHHHHHHhhcC
Q psy8429 120 ---------------SDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGY-SAEAIVKWIADRTD 170 (314)
Q Consensus 120 ---------------~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~-~a~~l~~fI~~~~~ 170 (314)
.++.++|+++++|+++++.++|+.. + .+.. +.+++.+.|++..+
T Consensus 105 ~~~~~~~~~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~----~---~g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 105 IANYGDPSWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVL----Y---AGTTPSLGELESVIKSVQG 164 (165)
T ss_dssp HHHHSCTTSEEEECCSHHHHHTTCCSSSEEEEEETTCCEE----E---EEESCCHHHHHHHHHHC--
T ss_pred HHHcCCCCeeEEeChHHHHHHhCCCCceEEEEEcCCCcEE----E---eCCCCCHHHHHHHHHHHhc
Confidence 3889999999999999997765431 1 4666 89999999987653
No 150
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.85 E-value=1e-08 Score=86.83 Aligned_cols=95 Identities=13% Similarity=0.151 Sum_probs=72.5
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhcccc-CCCCcEEEEEEECCC-CcchHHhC-----------------
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQ-MYSNKLFFILVDFDE-GSDVFQML----------------- 126 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~-~~~~~v~F~~vD~~~-~~~lf~~~----------------- 126 (314)
+..++|.|+++ ||++|+...|+++++++.+...+ ...+++.|..+++++ +++..+++
T Consensus 59 gk~vlv~F~a~----~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 134 (183)
T 3lwa_A 59 NQVVILNAWGQ----WCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFM 134 (183)
T ss_dssp TSEEEEEEECT----TCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCG
T ss_pred CCEEEEEEECC----cCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcch
Confidence 45789999999 99999999999999999987421 112345999999998 67666665
Q ss_pred --------CcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 127 --------RLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 127 --------~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
+++++|+.+++.+.|+.. ....+..+.+++.++|++.+
T Consensus 135 ~~~~~~~~~v~~~P~~~lid~~G~i~-----~~~~g~~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 135 TAASLGGVPASVIPTTIVLDKQHRPA-----AVFLREVTSKDVLDVALPLV 180 (183)
T ss_dssp GGGGTTTCCTTCCSEEEEECTTSCEE-----EEECSCCCHHHHHHHHHHHH
T ss_pred HHHHhccCCCCCCCeEEEECCCCcEE-----EEEcCCCCHHHHHHHHHHHH
Confidence 789999888887665431 22245678999999998765
No 151
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.83 E-value=1.5e-08 Score=82.87 Aligned_cols=93 Identities=14% Similarity=0.184 Sum_probs=70.8
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC-----------------------cch
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG-----------------------SDV 122 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~-----------------------~~l 122 (314)
+..+++.|+++ ||++|+...|.++++++.+.. .++.|..++.+++ .++
T Consensus 28 gk~vll~f~~~----~C~~C~~~~~~l~~~~~~~~~-----~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 98 (154)
T 3kcm_A 28 GQVVIVNFWAT----WCPPCREEIPSMMRLNAAMAG-----KPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRV 98 (154)
T ss_dssp TSEEEEEEECT----TCHHHHHHHHHHHHHHHHTTT-----SSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHH
T ss_pred CCEEEEEEECC----CCHHHHHHHHHHHHHHHHhcc-----CCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHH
Confidence 34689999999 999999999999999999862 4688999998875 458
Q ss_pred HHhCCcccCceEEEecCCCCCCCCCccceeecc--cCHHHHHHHHHhhcCCc
Q psy8429 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVG--YSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 123 f~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~--~~a~~l~~fI~~~~~~~ 172 (314)
.++|+++++|+.+++.++|+.. +.. .+. .+.+++.++|++..+..
T Consensus 99 ~~~~~v~~~P~~~lid~~G~i~----~~~-~g~~~~~~~~l~~~l~~l~~~~ 145 (154)
T 3kcm_A 99 GKLYGTTGVPETFVIDRHGVIL----KKV-VGAMEWDHPEVIAFLNNELSKA 145 (154)
T ss_dssp HHHHTCCSBCEEEEECTTSBEE----EEE-ESCCCTTSHHHHHHHHTC----
T ss_pred HHHhCCCCCCeEEEECCCCcEE----EEE-cCCCccccHHHHHHHHHHHHHh
Confidence 8999999999888887665431 111 233 36789999998876643
No 152
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.79 E-value=2e-08 Score=90.04 Aligned_cols=97 Identities=11% Similarity=0.085 Sum_probs=71.5
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCC--CccchhhHHHHHHHHHHhccccCCCCc--EEEEEEECCCCcchHHhCCcc
Q psy8429 54 QKYKEYIKNGPRNYSAIVMFTALAPQRN--CHICVSASDEYTIVANSFRYSQMYSNK--LFFILVDFDEGSDVFQMLRLN 129 (314)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~FtA~~~~~~--C~~C~~~~pefe~vA~s~~~~~~~~~~--v~F~~vD~~~~~~lf~~~~v~ 129 (314)
+.+++++. .-+.++++.|+++ | |++|++++|.++++|+.+.+ ..++ +.|+++|++++++++++|+|+
T Consensus 15 ~ql~~~~~--~~~~pv~v~~~~~----~~~c~~c~~~~~~l~ela~~~~~---~~~~~~v~~~~vd~d~~~~~~~~~gv~ 85 (243)
T 2hls_A 15 RELRETLA--EMVNPVEVHVFLS----KSGCETCEDTLRLMKLFEEESPT---RNGGKLLKLNVYYRESDSDKFSEFKVE 85 (243)
T ss_dssp HHHHHHHT--TCCSCEEEEEEEC----SSSCTTHHHHHHHHHHHHHHSCE---ETTEESEEEEEEETTTTHHHHHHTTCC
T ss_pred HHHHHHHH--hCCCCEEEEEEeC----CCCCCchHHHHHHHHHHHHhccC---CCCCceeEEEEecCCcCHHHHHhcCCC
Confidence 34666653 2244688999999 8 99999999999999987521 0123 999999999999999999999
Q ss_pred cCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhh
Q psy8429 130 TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 130 svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~ 168 (314)
++||+.+| ++ . ..| .+..+.+++.+|+.+.
T Consensus 86 ~~Pt~~i~-~g--~---~~~---~G~~~~~~l~~fv~~~ 115 (243)
T 2hls_A 86 RVPTVAFL-GG--E---VRW---TGIPAGEEIRALVEVI 115 (243)
T ss_dssp SSSEEEET-TT--T---EEE---ESCCCTTHHHHHHHHH
T ss_pred cCCEEEEE-CC--c---eeE---cCCCcHHHHHHHHHHH
Confidence 99999999 33 1 122 2444556666666554
No 153
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.79 E-value=1.5e-08 Score=85.04 Aligned_cols=69 Identities=17% Similarity=0.311 Sum_probs=59.3
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC------------------------cch
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG------------------------SDV 122 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~------------------------~~l 122 (314)
..++|.|+|+ ||++|++..|+++++++.+.. ..++.+..+++++. .++
T Consensus 49 k~vll~F~a~----wC~~C~~~~p~l~~l~~~~~~----~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 120 (165)
T 3s9f_A 49 KTVFFYFSAS----WCPPCRGFTPQLVEFYEKHHD----SKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEAL 120 (165)
T ss_dssp SEEEEEEECT----TCHHHHHHHHHHHHHHHHHTT----TTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHH
T ss_pred CEEEEEEECC----cChhHHHHHHHHHHHHHHhcc----CCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHH
Confidence 4689999999 999999999999999999862 13688888888876 688
Q ss_pred HHhCCcccCceEEEecCC-CCC
Q psy8429 123 FQMLRLNTAPIFMHFPAK-GKP 143 (314)
Q Consensus 123 f~~~~v~svPtl~~f~p~-~~~ 143 (314)
.++|+++++|+++++.+. |+.
T Consensus 121 ~~~~~v~~~Pt~~lid~~~G~i 142 (165)
T 3s9f_A 121 TKKYSVESIPTLIGLNADTGDT 142 (165)
T ss_dssp HHHTTCCSSSEEEEEETTTCCE
T ss_pred HHHcCCCCCCEEEEEeCCCCEE
Confidence 999999999999999875 543
No 154
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.78 E-value=1.6e-08 Score=82.11 Aligned_cols=69 Identities=12% Similarity=0.197 Sum_probs=58.0
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC------------------------cc
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG------------------------SD 121 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~------------------------~~ 121 (314)
+..+++.|+|+ ||++|+...|+++++++.+.. .+++.+..++++++ .+
T Consensus 28 gk~vll~F~a~----wC~~C~~~~~~l~~l~~~~~~----~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 99 (144)
T 1i5g_A 28 GKTVFFYFSAS----WCPPSRAFTPQLIDFYKAHAE----KKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEF 99 (144)
T ss_dssp TSEEEEEEECT----TCHHHHHHHHHHHHHHHHHTT----TTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHH
T ss_pred CCEEEEEEECC----CCHHHHHHHHHHHHHHHHhcc----CCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHH
Confidence 34689999999 999999999999999998862 13688888888863 57
Q ss_pred hHHhCCcccCceEEEec-CCCC
Q psy8429 122 VFQMLRLNTAPIFMHFP-AKGK 142 (314)
Q Consensus 122 lf~~~~v~svPtl~~f~-p~~~ 142 (314)
+.++|+++++|+++++. ++|+
T Consensus 100 ~~~~~~v~~~P~~~lid~~~G~ 121 (144)
T 1i5g_A 100 LTTGFDVKSIPTLVGVEADSGN 121 (144)
T ss_dssp HHHHTTCCSSSEEEEEETTTCC
T ss_pred HHHHcCCCCCCEEEEEECCCCc
Confidence 89999999999999997 5544
No 155
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.78 E-value=1.6e-08 Score=82.37 Aligned_cols=69 Identities=13% Similarity=0.249 Sum_probs=57.7
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC------------------------cc
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG------------------------SD 121 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~------------------------~~ 121 (314)
+..+++.|+|+ ||++|+...|.++++++.+.. .+++.+..++++++ .+
T Consensus 28 gk~vll~F~a~----wC~~C~~~~p~l~~l~~~~~~----~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 99 (146)
T 1o8x_A 28 GKLVFFYFSAS----WCPPARGFTPQLIEFYDKFHE----SKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQK 99 (146)
T ss_dssp TCEEEEEEECT----TCHHHHHHHHHHHHHHHHHTT----TTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHH
T ss_pred CCEEEEEEEcc----CCHHHHHHHHHHHHHHHHhhh----cCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHH
Confidence 34689999999 999999999999999998862 13688888888763 47
Q ss_pred hHHhCCcccCceEEEec-CCCC
Q psy8429 122 VFQMLRLNTAPIFMHFP-AKGK 142 (314)
Q Consensus 122 lf~~~~v~svPtl~~f~-p~~~ 142 (314)
+.++|+++++|+++++. ++|+
T Consensus 100 ~~~~~~v~~~Pt~~lid~~~G~ 121 (146)
T 1o8x_A 100 LSKHFNVESIPTLIGVDADSGD 121 (146)
T ss_dssp HHHHTTCCSSSEEEEEETTTCC
T ss_pred HHHHhCCCCCCEEEEEECCCCe
Confidence 89999999999999998 5544
No 156
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.78 E-value=1.2e-08 Score=84.98 Aligned_cols=87 Identities=11% Similarity=0.048 Sum_probs=65.0
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEE-----------------------CCCCcch
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVD-----------------------FDEGSDV 122 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD-----------------------~~~~~~l 122 (314)
+..+++.|+++ ||++|+...|+++++++. ++.+..+| .+++.++
T Consensus 51 gk~vll~F~a~----~C~~C~~~~~~l~~l~~~---------~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 117 (168)
T 2b1k_A 51 GKPVLLNVWAT----WCPTCRAEHQYLNQLSAQ---------GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGML 117 (168)
T ss_dssp SSCEEEEEECT----TCHHHHHHHHHHHHHHHT---------TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHH
T ss_pred CCEEEEEEECC----CCHHHHHHHHHHHHHHHC---------CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHH
Confidence 45689999999 999999999999998864 24455555 4556789
Q ss_pred HHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 123 f~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
.++|+++++|+.+++.++|+. .....|..+.+++.++|++.+.
T Consensus 118 ~~~~~v~~~P~~~lid~~G~i-----~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 118 GLDLGVYGAPETFLIDGNGII-----RYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp HHHHTCCSSSEEEEECTTSBE-----EEEEESCCCHHHHHHTTHHHHH
T ss_pred HHHcCccccCEEEEECCCCeE-----EEEEeCCCCHHHHHHHHHHHHH
Confidence 999999999977777655543 1222456788888888876643
No 157
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.77 E-value=1.2e-08 Score=79.17 Aligned_cols=80 Identities=16% Similarity=0.286 Sum_probs=63.8
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC--CCcchHHhCCcccCceEEEecCCCCC
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD--EGSDVFQMLRLNTAPIFMHFPAKGKP 143 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~--~~~~lf~~~~v~svPtl~~f~p~~~~ 143 (314)
+...+++|+++ ||++|++++|.+++++ .++.|.++|++ +++++.++++ +++|+++ ..| +.
T Consensus 15 ~~~~v~~f~~~----~C~~C~~~~~~L~~l~----------~~i~~~~vdi~~~~~~el~~~~g-~~vP~l~--~~g-~~ 76 (100)
T 1wjk_A 15 ALPVLTLFTKA----PCPLCDEAKEVLQPYK----------DRFILQEVDITLPENSTWYERYK-FDIPVFH--LNG-QF 76 (100)
T ss_dssp CCCEEEEEECS----SCHHHHHHHHHTSTTS----------SSSEEEEEETTSSTTHHHHHHSS-SSCSEEE--ESS-SE
T ss_pred CCCEEEEEeCC----CCcchHHHHHHHHHhh----------hCCeEEEEECCCcchHHHHHHHC-CCCCEEE--ECC-EE
Confidence 44578999999 9999999999887654 23889999999 7899999999 9999874 443 21
Q ss_pred CCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 144 KPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 144 ~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
. ..++.+.+++.++|++...
T Consensus 77 -----~--~~~g~~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 77 -----L--MMHRVNTSKLEKQLRKLSG 96 (100)
T ss_dssp -----E--EESSCCHHHHHHHHHSSSC
T ss_pred -----E--EecCCCHHHHHHHHHHHHh
Confidence 1 2467889999999987654
No 158
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.76 E-value=1.9e-08 Score=82.31 Aligned_cols=87 Identities=9% Similarity=0.084 Sum_probs=65.8
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC-----------------------CCCcch
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF-----------------------DEGSDV 122 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~-----------------------~~~~~l 122 (314)
+..+++.|+++ ||++|+...|.++++++. +++.|..+++ +++.++
T Consensus 42 gk~~ll~f~~~----~C~~C~~~~~~l~~l~~~--------~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (156)
T 1kng_A 42 GKVSLVNVWAS----WCVPCHDEAPLLTELGKD--------KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRA 109 (156)
T ss_dssp TSCEEEEEECT----TCHHHHHHHHHHHHHTTC--------TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHH
T ss_pred CCEEEEEEEcc----cCHhHHHHHHHHHHHHhc--------CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHH
Confidence 34689999999 999999999999988754 2477777765 345688
Q ss_pred HHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 123 f~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
.++|+++++|+.+++.++|+. .....|..+.+++.++|++.+
T Consensus 110 ~~~~~v~~~P~~~~id~~G~i-----~~~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 110 SIEWGVYGVPETFVVGREGTI-----VYKLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp HHHTTCCSSCEEEEECTTSBE-----EEEEESCCCHHHHHHTHHHHH
T ss_pred HHhcCcCccCeEEEEcCCCCE-----EEEEeCCCCHHHHHHHHHHHH
Confidence 999999999988777655443 122246678888988887764
No 159
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.75 E-value=3e-08 Score=80.46 Aligned_cols=86 Identities=13% Similarity=0.112 Sum_probs=66.8
Q ss_pred CCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC-------------------------
Q psy8429 65 RNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG------------------------- 119 (314)
Q Consensus 65 r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~------------------------- 119 (314)
++..+++.|+|+ ||++|+...|+++++.+.+.. +++.+..++++++
T Consensus 31 ~gk~vll~F~a~----wC~~C~~~~~~l~~l~~~~~~-----~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~ 101 (143)
T 4fo5_A 31 LGRYTLLNFWAA----YDAESRARNVQLANEVNKFGP-----DKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGK 101 (143)
T ss_dssp SCCEEEEEEECT----TCHHHHHHHHHHHHHHTTSCT-----TTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGG
T ss_pred CCCEEEEEEEcC----cCHHHHHHHHHHHHHHHHhCc-----CCEEEEEEEccCCHHHHHHHHHHhCCCCceeeeccccc
Confidence 345789999999 999999999999999988863 3588888888753
Q ss_pred -cchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHh
Q psy8429 120 -SDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIAD 167 (314)
Q Consensus 120 -~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~ 167 (314)
.++.+.|+++++|+.+++.+.|+.. ....+.+++.+.+++
T Consensus 102 ~~~~~~~~~v~~~P~~~lid~~G~i~--------~~~~~~~~l~~~l~~ 142 (143)
T 4fo5_A 102 ESELYKKYDLRKGFKNFLINDEGVII--------AANVTPEKLTEILKA 142 (143)
T ss_dssp GSHHHHHTTGGGCCCEEEECTTSBEE--------EESCCHHHHHHHHTC
T ss_pred chHHHHHcCCCCCCcEEEECCCCEEE--------EccCCHHHHHHHHHh
Confidence 3577899999999999998765431 123457778777754
No 160
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.75 E-value=1.9e-08 Score=81.35 Aligned_cols=68 Identities=15% Similarity=0.324 Sum_probs=57.0
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC------------------------cch
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG------------------------SDV 122 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~------------------------~~l 122 (314)
..+++.|+|+ ||++|+...|.++++++.+.. .+++.+..++++++ .++
T Consensus 29 k~vll~F~a~----wC~~C~~~~~~l~~l~~~~~~----~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (144)
T 1o73_A 29 KTVFLYFSAS----WCPPCRGFTPVLAEFYEKHHV----AKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSEL 100 (144)
T ss_dssp CEEEEEEECT----TCHHHHHHHHHHHHHHHHHTT----TTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHH
T ss_pred CEEEEEEECc----CCHHHHHHHHHHHHHHHHhcc----CCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHH
Confidence 4689999999 999999999999999998852 13588888888763 468
Q ss_pred HHhCCcccCceEEEec-CCCC
Q psy8429 123 FQMLRLNTAPIFMHFP-AKGK 142 (314)
Q Consensus 123 f~~~~v~svPtl~~f~-p~~~ 142 (314)
.++|+++++|+++++. ++|+
T Consensus 101 ~~~~~v~~~Pt~~lid~~~G~ 121 (144)
T 1o73_A 101 GKTFGVESIPTLITINADTGA 121 (144)
T ss_dssp HHHHTCCSSSEEEEEETTTCC
T ss_pred HHHcCCCCCCEEEEEECCCCe
Confidence 8999999999999998 5554
No 161
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.74 E-value=7.2e-08 Score=78.79 Aligned_cols=87 Identities=14% Similarity=0.147 Sum_probs=69.9
Q ss_pred CccEEEEEeeCCCCCCCcc--chhhHHHHHHHHHHh-ccccCCCCcEEEEEEECCCCc----------------------
Q psy8429 66 NYSAIVMFTALAPQRNCHI--CVSASDEYTIVANSF-RYSQMYSNKLFFILVDFDEGS---------------------- 120 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~--C~~~~pefe~vA~s~-~~~~~~~~~v~F~~vD~~~~~---------------------- 120 (314)
+.++++.|+++ ||++ |+...|+++++++.+ .. +++.|..+++++++
T Consensus 33 gk~vll~F~a~----~C~~v~C~~~~~~l~~l~~~~~~~-----~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~ 103 (150)
T 3fw2_A 33 QKSLLINFWAS----WNDSISQKQSNSELREIYKKYKKN-----KYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGG 103 (150)
T ss_dssp TSEEEEEEECT----TCCCHHHHHHHHHHHHHHHHHTTC-----SSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCG
T ss_pred CCEEEEEEEeC----CCCchHHHHHHHHHHHHHHHhccC-----CCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcc
Confidence 34689999999 9999 999999999999998 42 35899999988764
Q ss_pred ---chHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 121 ---DVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 121 ---~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
++.+.|+++++|+++++.+.|+.. . ...+.+++.+.|++.+
T Consensus 104 ~~~~~~~~~~v~~~P~~~lid~~G~i~-----~---~~~~~~~l~~~l~~ll 147 (150)
T 3fw2_A 104 LNSEVAKQYSIYKIPANILLSSDGKIL-----A---KNLRGEELKKKIENIV 147 (150)
T ss_dssp GGCHHHHHTTCCSSSEEEEECTTSBEE-----E---ESCCHHHHHHHHHHHH
T ss_pred cchHHHHHcCCCccCeEEEECCCCEEE-----E---ccCCHHHHHHHHHHHH
Confidence 789999999999999997665431 1 1137788888887654
No 162
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.19 E-value=1.4e-09 Score=87.91 Aligned_cols=69 Identities=17% Similarity=0.177 Sum_probs=56.1
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC-------------------------cch
Q psy8429 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG-------------------------SDV 122 (314)
Q Consensus 68 ~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~-------------------------~~l 122 (314)
.+++.|+|+ ||++|+...|.++++++.+... .+++.+..++++++ .++
T Consensus 28 ~vll~F~a~----wC~~C~~~~~~l~~~~~~~~~~---~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (143)
T 2lus_A 28 IIGFYFSAH----WCPPCRGFTPILADMYSELVDD---SAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNV 100 (143)
Confidence 589999999 9999999999999999888421 13566777776654 478
Q ss_pred HHhCCcccCceEEEecCCCCC
Q psy8429 123 FQMLRLNTAPIFMHFPAKGKP 143 (314)
Q Consensus 123 f~~~~v~svPtl~~f~p~~~~ 143 (314)
.++|+++++|+++++.++|+.
T Consensus 101 ~~~~~v~~~P~~~lid~~G~i 121 (143)
T 2lus_A 101 TAKYGITGIPALVIVKKDGTL 121 (143)
Confidence 999999999999999876554
No 163
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.69 E-value=4.9e-09 Score=77.39 Aligned_cols=58 Identities=14% Similarity=0.255 Sum_probs=47.7
Q ss_pred EEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC-CCcchHHhCCcccCceEEE
Q psy8429 69 AIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-EGSDVFQMLRLNTAPIFMH 136 (314)
Q Consensus 69 vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~-~~~~lf~~~~v~svPtl~~ 136 (314)
-+++|+++ ||++|+.++|.++++++++. .++.+.++|.+ +++++.+++|++++|++++
T Consensus 3 ~~~~f~~~----~C~~C~~~~~~l~~~~~~~~------~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i 61 (80)
T 2k8s_A 3 SKAIFYHA----GCPVCVSAEQAVANAIDPSK------YTVEIVHLGTDKARIAEAEKAGVKSVPALVI 61 (80)
T ss_dssp EEEEEEEC----SCHHHHHHHHHHHHHSCTTT------EEEEEEETTTCSSTHHHHHHHTCCEEEEEEE
T ss_pred ceEEEeCC----CCCchHHHHHHHHHHHHhcC------CeEEEEEecCChhhHHHHHHcCCCcCCEEEE
Confidence 36889999 99999999999999886653 24666666665 5788999999999999987
No 164
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.69 E-value=3.6e-08 Score=82.65 Aligned_cols=102 Identities=14% Similarity=0.198 Sum_probs=76.9
Q ss_pred hhhHHHHHH-cCCCCccEEEEEeeCCCCCCCccchhhHHHH---HHHHHHhccccCCCCcEEEEEEECCC--CcchHHhC
Q psy8429 53 GQKYKEYIK-NGPRNYSAIVMFTALAPQRNCHICVSASDEY---TIVANSFRYSQMYSNKLFFILVDFDE--GSDVFQML 126 (314)
Q Consensus 53 ~~nf~~~v~-~~~r~y~vvV~FtA~~~~~~C~~C~~~~pef---e~vA~s~~~~~~~~~~v~F~~vD~~~--~~~lf~~~ 126 (314)
..+|++.+. +..++.+++|+|+++ ||..|+.|+.+. ++|++... +...+.++|.++ +.++.++|
T Consensus 28 ~~~~~~Al~~Ak~~~K~vlvd~~a~----wC~~C~~me~~vf~d~~V~~~l~------~~fv~v~~d~~~~~~~~l~~~y 97 (153)
T 2dlx_A 28 KGSFETAKECGQMQNKWLMINIQNV----QDFACQCLNRDVWSNEAVKNIIR------EHFIFWQVYHDSEEGQRYIQFY 97 (153)
T ss_dssp CSCHHHHHHHHHHHTCEEEEEEECS----CTTTHHHHHHHTTTCHHHHHHHH------HTEEEEEEESSSHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHcCCeEEEEEECC----CCHhHHHHHHHhcCCHHHHHHHH------cCeEEEEEecCCHhHHHHHHHc
Confidence 356777663 223466899999999 999999998765 66666553 358999999977 46789999
Q ss_pred CcccCceEEEecCC-CCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 127 RLNTAPIFMHFPAK-GKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 127 ~v~svPtl~~f~p~-~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
++.+.|+++++.|. |+. +.. .++.+++++.++|++.+.
T Consensus 98 ~v~~~P~~~fld~~~G~~-----l~~-~~g~~~~~fl~~L~~~l~ 136 (153)
T 2dlx_A 98 KLGDFPYVSILDPRTGQK-----LVE-WHQLDVSSFLDQVTGFLG 136 (153)
T ss_dssp TCCSSSEEEEECTTTCCC-----CEE-ESSCCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEeCCCCcE-----eee-cCCCCHHHHHHHHHHHHH
Confidence 99999999999875 432 222 245899999998887654
No 165
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.69 E-value=6.6e-08 Score=79.73 Aligned_cols=68 Identities=9% Similarity=0.147 Sum_probs=58.7
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcc-----------------------hH
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD-----------------------VF 123 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~-----------------------lf 123 (314)
..+++.|+|+ ||++|+...|.++++++.+.. .++.+..+++++.++ +.
T Consensus 36 k~vll~F~a~----wC~~C~~~~~~l~~l~~~~~~-----~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 106 (152)
T 2lrt_A 36 KVVLIDFTVY----NNAMSAAHNLALRELYNKYAS-----QGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYI 106 (152)
T ss_dssp SEEEEEEECT----TCHHHHHHHHHHHHHHHHHGG-----GTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHH
T ss_pred CEEEEEEEcC----CChhhHHHHHHHHHHHHHhcc-----CCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHH
Confidence 3689999999 999999999999999999863 358999999987654 88
Q ss_pred HhCCcccCceEEEecCCCCC
Q psy8429 124 QMLRLNTAPIFMHFPAKGKP 143 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~ 143 (314)
++|+++++|+++++.+.|+.
T Consensus 107 ~~~~v~~~P~~~lid~~G~i 126 (152)
T 2lrt_A 107 SLYNVTNLPSVFLVNRNNEL 126 (152)
T ss_dssp HHHTCCSCSEEEEEETTTEE
T ss_pred HHcCcccCceEEEECCCCeE
Confidence 99999999999999776543
No 166
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.68 E-value=4.9e-08 Score=83.34 Aligned_cols=95 Identities=18% Similarity=0.246 Sum_probs=71.8
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC-----------------------------
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD----------------------------- 117 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~----------------------------- 117 (314)
..+++.|+++ ||++|+...|+++++++.+.. .++.|..++++
T Consensus 47 ~~vlv~F~a~----~C~~C~~~~~~l~~l~~~~~~-----~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d 117 (196)
T 2ywi_A 47 AATVIMFICN----HCPFVKHVQHELVRLANDYMP-----KGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYD 117 (196)
T ss_dssp SEEEEEECCS----SCHHHHHHHHHHHHHHHHHGG-----GTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEEC
T ss_pred CeEEEEEeCC----CCccHHHHHHHHHHHHHHHHh-----CCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEEC
Confidence 3589999999 999999999999999999863 34888888883
Q ss_pred CCcchHHhCCcccCceEEEecCCCCCCCCCccce----eecccCHHHHHHHHHhhcC
Q psy8429 118 EGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDI----QRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 118 ~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~----~~~~~~a~~l~~fI~~~~~ 170 (314)
++.++.++|++.++|+++++.++|+.......+- ..+..+.+++.+.|++.+.
T Consensus 118 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 118 ETQEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLE 174 (196)
T ss_dssp SSCHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHH
T ss_pred CchHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHc
Confidence 4678999999999999999976655310000000 1244578899999988764
No 167
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.63 E-value=1e-07 Score=80.95 Aligned_cols=95 Identities=15% Similarity=0.183 Sum_probs=70.9
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC-----------------------------
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF----------------------------- 116 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~----------------------------- 116 (314)
+..++|.|+++ ||++|+...|+++++++.+.. + +.|..+++
T Consensus 33 gk~vlv~F~a~----~C~~C~~~~~~l~~l~~~~~~-----~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 102 (188)
T 2cvb_A 33 EPLLAVVFMCN----HCPYVKGSIGELVALAERYRG-----K-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLL 102 (188)
T ss_dssp SSEEEEEEECS----SCHHHHTTHHHHHHHHHHTTT-----T-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEE
T ss_pred CCEEEEEEECC----CCccHHHHHHHHHHHHHHhhc-----C-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEE
Confidence 45689999999 999999999999999998862 3 88889988
Q ss_pred CCCcchHHhCCcccCceEEEecCCCCCCCCCccc---eeecccCHHHHHHHHHhhcC
Q psy8429 117 DEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLD---IQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 117 ~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~---~~~~~~~a~~l~~fI~~~~~ 170 (314)
|++.++.+.|++.++|+++++.+.|+.......+ ...+..+.+++.+.|++.+.
T Consensus 103 d~~~~~~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~ 159 (188)
T 2cvb_A 103 DETQEVAKAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLR 159 (188)
T ss_dssp CSSSHHHHHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHT
T ss_pred CCcchHHHHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHc
Confidence 3467899999999999999997665431000000 01123467888888888765
No 168
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.62 E-value=1.8e-07 Score=79.16 Aligned_cols=92 Identities=14% Similarity=0.136 Sum_probs=69.9
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC-----cchHHhCCcc-----------
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG-----SDVFQMLRLN----------- 129 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~-----~~lf~~~~v~----------- 129 (314)
+..+++.|+++ ||++|+...|+++++++.+.+ +++.+..+++++. .+..++++++
T Consensus 60 gk~vll~F~a~----~C~~C~~~~~~l~~l~~~~~~-----~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 130 (186)
T 1jfu_A 60 GKTLLVNLWAT----WCVPCRKEMPALDELQGKLSG-----PNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAK 130 (186)
T ss_dssp TSEEEEEEECT----TCHHHHHHHHHHHHHHHHHCB-----TTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCH
T ss_pred CCEEEEEEEeC----CCHhHHHHHHHHHHHHHHhcc-----CCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcch
Confidence 34689999999 999999999999999998862 4688888888764 4567777775
Q ss_pred ------------cCceEEEecCCCCCCCCCccceeeccc--CHHHHHHHHHhhcCC
Q psy8429 130 ------------TAPIFMHFPAKGKPKPSDTLDIQRVGY--SAEAIVKWIADRTDI 171 (314)
Q Consensus 130 ------------svPtl~~f~p~~~~~~~~~~~~~~~~~--~a~~l~~fI~~~~~~ 171 (314)
++|+++++.+.|+.. +.. .|.. +.+++.++|++.++.
T Consensus 131 ~~~~~~~~~~~~~~P~~~lid~~G~i~----~~~-~g~~~~~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 131 VFQDLKAIGRALGMPTSVLVDPQGCEI----ATI-AGPAEWASEDALKLIRAATGK 181 (186)
T ss_dssp HHHHHHTTTCCSSSSEEEEECTTSBEE----EEE-ESCCCTTSHHHHHHHHHHHC-
T ss_pred HHHHhccccccCCCCEEEEECCCCCEE----EEE-ecCCccCHHHHHHHHHHHhcc
Confidence 899999997665431 111 3333 478999999888763
No 169
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.61 E-value=1.3e-07 Score=89.53 Aligned_cols=92 Identities=15% Similarity=0.104 Sum_probs=73.0
Q ss_pred CCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC---------------------------
Q psy8429 65 RNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD--------------------------- 117 (314)
Q Consensus 65 r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~--------------------------- 117 (314)
++..++|.|+++ ||++|+...|+++++++.+.. +++.+..|+++
T Consensus 81 ~GK~vLl~F~at----wC~~C~~~~p~L~~l~~~~~~-----~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D 151 (352)
T 2hyx_A 81 RGKVVLIDFWAY----SCINCQRAIPHVVGWYQAYKD-----SGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALD 151 (352)
T ss_dssp TTSEEEEEEECT----TCHHHHHHHHHHHHHHHHHGG-----GTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEEC
T ss_pred CCCEEEEEEECC----CChhHHHHHHHHHHHHHHhhc-----CCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeC
Confidence 345799999999 999999999999999999863 35888888764
Q ss_pred CCcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 118 EGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 118 ~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
++.++.++|+++++|+++++.+.|+.. ....+..+.+++.++|++.+.
T Consensus 152 ~~~~l~~~ygV~~~Pt~~lID~~G~Iv-----~~~~G~~~~~~l~~~I~~lL~ 199 (352)
T 2hyx_A 152 NNYATWTNYRNRYWPAEYLIDATGTVR-----HIKFGEGDYNVTETLVRQLLN 199 (352)
T ss_dssp TTSHHHHHTTCCEESEEEEECTTSBEE-----EEEESBCCHHHHHHHHHHHHH
T ss_pred CcHHHHHHcCCCccCEEEEEeCCCeEE-----EEEcCCCCHHHHHHHHHHHHh
Confidence 346899999999999999996665431 222456678889888887653
No 170
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.58 E-value=1.5e-07 Score=79.60 Aligned_cols=87 Identities=15% Similarity=0.088 Sum_probs=66.0
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC-----------------------CCCcch
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF-----------------------DEGSDV 122 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~-----------------------~~~~~l 122 (314)
+..+++.|+++ ||++|+...|+++++++. ++.+..+++ |.+.++
T Consensus 58 gk~vll~F~a~----~C~~C~~~~~~l~~l~~~---------~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~ 124 (176)
T 3kh7_A 58 GKPALVNVWGT----WCPSCRVEHPELTRLAEQ---------GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTL 124 (176)
T ss_dssp SSCEEEEEECT----TCHHHHHHHHHHHHHHHT---------TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHH
T ss_pred CCEEEEEEECC----cCHHHHHHHHHHHHHHHC---------CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchH
Confidence 34689999999 999999999999998764 255555553 446788
Q ss_pred HHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 123 FQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 123 f~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
.++|++.++|+.+++.+.|+.. ....+..+.+++.++|.+.+.
T Consensus 125 ~~~~~v~~~P~~~lid~~G~i~-----~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 125 GLDLGVYGAPETYLIDKQGIIR-----HKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp HHHHTCCSSCEEEEECTTCBEE-----EEEESCCCHHHHHHHTHHHHH
T ss_pred HHHcCCCCCCeEEEECCCCeEE-----EEEcCCCCHHHHHHHHHHHHH
Confidence 9999999999998887765531 222466788888888877654
No 171
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.99 E-value=6.6e-09 Score=85.83 Aligned_cols=91 Identities=14% Similarity=0.105 Sum_probs=63.9
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHH-HHHHhccccCCCCcEEEEEEECCCCcchHHhCC-----------------
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTI-VANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR----------------- 127 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~-vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~----------------- 127 (314)
+..+++.|+|+ ||++|+...|.+++ +.+.+.. .+++.++.+|++++++..+++.
T Consensus 33 gk~vll~f~a~----~C~~C~~~~~~l~~~l~~~~~~----~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~ 104 (159)
T 2ls5_A 33 GKVVMLQFTAS----WCGVCRKEMPFIEKDIWLKHKD----NADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADI 104 (159)
Confidence 34689999999 99999999999998 8877651 2468888888887665554444
Q ss_pred -------cccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 128 -------LNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 128 -------v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
+.++|+++++.+.|+.. +. ..+.+.+++.+++++..+
T Consensus 105 ~~~~~~~~~~~P~~~lid~~G~i~----~~--~~g~~~~~l~~~l~~l~~ 148 (159)
T 2ls5_A 105 FAKYALRDAGITRNVLIDREGKIV----KL--TRLYNEEEFASLVQQINE 148 (159)
Confidence 67799999996655542 11 123455666666655433
No 172
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.52 E-value=1.7e-07 Score=82.29 Aligned_cols=95 Identities=11% Similarity=0.142 Sum_probs=71.7
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC-----------------------------
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD----------------------------- 117 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~----------------------------- 117 (314)
+.++|.|+++ ||++|+...|.++++++.+.. .++.|..|+.+
T Consensus 60 ~~vll~F~a~----~C~~C~~~~~~l~~l~~~~~~-----~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D 130 (218)
T 3u5r_E 60 PALLVAFISN----RCPFVVLIREALAKFAGDYAG-----QGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKD 130 (218)
T ss_dssp SEEEEEECCS----SCHHHHTTHHHHHHHHHHHTT-----TTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEEC
T ss_pred CeEEEEEECC----CCccHHHHHHHHHHHHHHHHh-----CCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEEC
Confidence 3589999999 999999999999999999863 34899999984
Q ss_pred CCcchHHhCCcccCceEEEecCCCCCCCCCccc----eeecccCHHHHHHHHHhhcC
Q psy8429 118 EGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLD----IQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 118 ~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~----~~~~~~~a~~l~~fI~~~~~ 170 (314)
.+.++.+.|++.++|+++++.+.|+..-...++ ...+..+.+++.+.|++.+.
T Consensus 131 ~~~~~~~~~~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~ 187 (218)
T 3u5r_E 131 ASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLK 187 (218)
T ss_dssp TTCHHHHHHTCCEESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHT
T ss_pred CccHHHHHcCCCCCCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHc
Confidence 467899999999999999997665431000000 01123457889999988764
No 173
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.52 E-value=7.8e-08 Score=71.05 Aligned_cols=75 Identities=21% Similarity=0.367 Sum_probs=58.8
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCc----chHHhCC--cccCceEEEecCCCCC
Q psy8429 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS----DVFQMLR--LNTAPIFMHFPAKGKP 143 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~----~lf~~~~--v~svPtl~~f~p~~~~ 143 (314)
+++|+++ ||++|+.++|.++++++.+. ++.|..+|+++++ ++.++++ +.++|+++ ..| +.
T Consensus 3 v~~f~~~----~C~~C~~~~~~l~~l~~~~~-------~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~--~~g-~~ 68 (85)
T 1ego_A 3 TVIFGRS----GCPYCVRAKDLAEKLSNERD-------DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQIF--VDQ-QH 68 (85)
T ss_dssp EEEECCT----TSTHHHHHHHHHHHHHHHHS-------SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEE--ETT-EE
T ss_pred EEEEeCC----CCCCHHHHHHHHHHHHhcCC-------CceEEEEecccChHHHHHHHHHhCCCCceeCeEE--ECC-EE
Confidence 6789999 99999999999999998753 4889999998764 7888999 99999984 333 21
Q ss_pred CCCCccceeecccCHHHHHHHHHhhc
Q psy8429 144 KPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 144 ~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
.++ .+++.+++++..
T Consensus 69 ---------i~~--~~~l~~~~~~~~ 83 (85)
T 1ego_A 69 ---------IGG--YTDFAAWVKENL 83 (85)
T ss_dssp ---------EES--SHHHHHHHHHHH
T ss_pred ---------EEC--HHHHHHHHHHhc
Confidence 122 367888887653
No 174
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.49 E-value=5.2e-07 Score=77.43 Aligned_cols=98 Identities=9% Similarity=0.157 Sum_probs=70.6
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC-------------------------Cc
Q psy8429 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------------------------GS 120 (314)
Q Consensus 67 y~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~-------------------------~~ 120 (314)
..+++.|+ ++ ||++|+...|+++++++.+.+ .++.+..|+.|. +.
T Consensus 46 k~vvl~F~~a~----~C~~C~~~~~~l~~l~~~~~~-----~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 116 (195)
T 2bmx_A 46 KWRVVFFWPKD----FTFVCPTEIAAFSKLNDEFED-----RDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKR 116 (195)
T ss_dssp CEEEEEECSCT----TSCCCHHHHHHHHHTHHHHHT-----TTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTS
T ss_pred CcEEEEEEcCC----CCCCcHHHHHHHHHHHHHHHH-----CCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCch
Confidence 46899999 99 999999999999999999863 357788887764 45
Q ss_pred chHHhCCcc-----cCceEEEecCCCCCCCCCccceeec----ccCHHHHHHHHHhhcCCcceeeCCCCC
Q psy8429 121 DVFQMLRLN-----TAPIFMHFPAKGKPKPSDTLDIQRV----GYSAEAIVKWIADRTDIQIRVFRPPNY 181 (314)
Q Consensus 121 ~lf~~~~v~-----svPtl~~f~p~~~~~~~~~~~~~~~----~~~a~~l~~fI~~~~~~~i~i~~p~~~ 181 (314)
++.+.|++. ++|+++++.+.|+.. +.. .+ ..+.+++.+.|++... ....|.+|
T Consensus 117 ~~~~~~~v~~~~g~~~P~~~lid~~G~i~----~~~-~g~~~~~~~~~~l~~~l~~l~~---~~~~p~~w 178 (195)
T 2bmx_A 117 ELSQAAGVLNADGVADRVTFIVDPNNEIQ----FVS-ATAGSVGRNVDEVLRVLDALQS---DELCASNW 178 (195)
T ss_dssp HHHHHHTCBCTTSSBCEEEEEECTTSBEE----EEE-EECTTCCCCHHHHHHHHHHHHC-----------
T ss_pred HHHHHhCCcccCCCccceEEEEcCCCeEE----EEE-ecCCCCCCCHHHHHHHHHHHhh---CCCcCccc
Confidence 788999999 999999997765542 111 12 2378999999988765 22345555
No 175
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.48 E-value=5.6e-08 Score=76.15 Aligned_cols=88 Identities=19% Similarity=0.200 Sum_probs=57.0
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC-----cchHHhCCc
Q psy8429 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG-----SDVFQMLRL 128 (314)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~-----~~lf~~~~v 128 (314)
+.+++.+ ++ ..+++ |+++ ||++|+.+.|.+++++.. +.+..+|.+++ +++.+++++
T Consensus 11 ~~~~~~~-~~---~~vv~-f~a~----~C~~C~~~~~~l~~~~~~----------~~~v~v~~~~~~~~~~~~l~~~~~v 71 (116)
T 2e7p_A 11 KKAKELA-SS---APVVV-FSKT----YCGYCNRVKQLLTQVGAS----------YKVVELDELSDGSQLQSALAHWTGR 71 (116)
T ss_dssp HHHHHHH-TS---SSEEE-EECT----TCHHHHHHHHHHHHHTCC----------CEEEEGGGSTTHHHHHHHHHHHHSC
T ss_pred HHHHHHH-cC---CCEEE-EECC----CChhHHHHHHHHHHcCCC----------eEEEEccCCCChHHHHHHHHHHhCC
Confidence 3445554 23 23544 9999 999999999999987532 34555555554 468999999
Q ss_pred ccCceEEEecCCCCCCCCCccceeeccc---CHHHHHHHHHhh
Q psy8429 129 NTAPIFMHFPAKGKPKPSDTLDIQRVGY---SAEAIVKWIADR 168 (314)
Q Consensus 129 ~svPtl~~f~p~~~~~~~~~~~~~~~~~---~a~~l~~fI~~~ 168 (314)
+++|++ |..| +.. ..+ .+.. +.+++.++|++.
T Consensus 72 ~~~Pt~--~~~g-~~v--~~~---~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 72 GTVPNV--FIGG-KQI--GGC---DTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp CSSCEE--EETT-EEE--ECH---HHHHHHHHTTCHHHHHHHT
T ss_pred CCcCEE--EECC-EEE--CCh---HHHHHHHhCChHHHHHHHc
Confidence 999999 4444 221 011 1111 556788888764
No 176
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.47 E-value=6.1e-07 Score=73.84 Aligned_cols=94 Identities=16% Similarity=0.185 Sum_probs=70.1
Q ss_pred ccEEEEEeeCCCCCCCcc-chhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCc-------------------------
Q psy8429 67 YSAIVMFTALAPQRNCHI-CVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS------------------------- 120 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~-C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~------------------------- 120 (314)
..+++.|+++ ||++ |+...|.++++.+.+.+..+ .+++.+..+++|...
T Consensus 24 k~vll~f~~~----~C~~~C~~~~~~l~~l~~~~~~~~~-~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d 98 (164)
T 2ggt_A 24 QWLLIYFGFT----HCPDVCPEELEKMIQVVDEIDSITT-LPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTRE 98 (164)
T ss_dssp CEEEEEEECT----TCSSHHHHHHHHHHHHHHHHHHSSS-SCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHH
T ss_pred CEEEEEEEeC----CCCchhHHHHHHHHHHHHHHhhccC-CCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHH
Confidence 4689999999 9998 99999999999999863211 135777777776521
Q ss_pred ---chHHhCCcccCc---------------eEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 121 ---DVFQMLRLNTAP---------------IFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 121 ---~lf~~~~v~svP---------------tl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
++.+.|++...| +.+++.+.|+.. ....+..+.+++.+.|++.+.
T Consensus 99 ~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~-----~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 99 EVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFL-----DYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEE-----EEEETTCCHHHHHHHHHHHHG
T ss_pred HHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEE-----EEeCCCCCHHHHHHHHHHHHH
Confidence 378899999999 777777665531 222456788999999987653
No 177
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.41 E-value=6.6e-07 Score=74.22 Aligned_cols=68 Identities=12% Similarity=0.074 Sum_probs=58.1
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC---------------------CCcchHH
Q psy8429 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD---------------------EGSDVFQ 124 (314)
Q Consensus 67 y~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~---------------------~~~~lf~ 124 (314)
+++++.|+ |+ ||++|+...|.++++++.+.+ .++.+..|+.| .+.++.+
T Consensus 30 ~~vvl~F~~a~----~C~~C~~~~~~l~~~~~~~~~-----~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 100 (161)
T 3drn_A 30 HNIVLYFYPKD----DTPGSTREASAFRDNWDLLKD-----YDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRE 100 (161)
T ss_dssp SEEEEEECSCT----TCHHHHHHHHHHHHTHHHHHT-----TCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHH
T ss_pred CCEEEEEEcCC----CCCchHHHHHHHHHHHHHHHH-----cCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHH
Confidence 34889999 99 999999999999999999863 34888888887 5678999
Q ss_pred hCCccc----CceEEEecCCCCC
Q psy8429 125 MLRLNT----APIFMHFPAKGKP 143 (314)
Q Consensus 125 ~~~v~s----vPtl~~f~p~~~~ 143 (314)
.|++.+ +|+.+++.+.|+.
T Consensus 101 ~~~v~~~~~~~P~~~lid~~G~i 123 (161)
T 3drn_A 101 LYGAKGFILPARITFVIDKKGII 123 (161)
T ss_dssp HTTCCCSSSCCCEEEEECTTSBE
T ss_pred HcCCCCcCcccceEEEECCCCEE
Confidence 999999 9999999776654
No 178
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.41 E-value=2.2e-06 Score=80.31 Aligned_cols=126 Identities=15% Similarity=0.128 Sum_probs=92.8
Q ss_pred hHHHHHHHHhhhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEE
Q psy8429 32 LGDRVLHLSEMNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFF 111 (314)
Q Consensus 32 ~~~~~~~L~~l~~~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F 111 (314)
..+.+.+..+.....-|.++|.+|++++. +++.+...++.|..+ +|+.|.++.++++++|+.+.. ++++.|
T Consensus 212 ~~~~l~~fi~~~~~p~v~elt~~~~~~~~-~~~~~~~~~l~f~~~----~~~~~~~~~~~~~~vA~~~~~----~~~~~f 282 (350)
T 1sji_A 212 TEEELVEFVKEHQRPTLRRLRPEDMFETW-EDDLNGIHIVAFAER----SDPDGYEFLEILKQVARDNTD----NPDLSI 282 (350)
T ss_dssp CHHHHHHHHHHHCCCSEEECCTTTHHHHH-HSCSSSEEEEEECCT----TSHHHHHHHHHHHHHHHHGGG----CSSCCE
T ss_pred CHHHHHHHHHHcCccchhhcChhhHHHHh-cCCCCCcEEEEEEcC----CCccHHHHHHHHHHHHHHhCC----CCceEE
Confidence 34455555544334569999999999986 444322334558887 999999999999999999862 136999
Q ss_pred EEEECCCCcchH----HhCCcc-cCceEEEecCCCCCCCCCccc--ee--ecccCHHHHHHHHHhhcC
Q psy8429 112 ILVDFDEGSDVF----QMLRLN-TAPIFMHFPAKGKPKPSDTLD--IQ--RVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 112 ~~vD~~~~~~lf----~~~~v~-svPtl~~f~p~~~~~~~~~~~--~~--~~~~~a~~l~~fI~~~~~ 170 (314)
+.+|.++.+..+ +.+|++ +.|++.++.+. +. +.|. +. .+..+++.+.+|+++...
T Consensus 283 ~~id~~~~~~~~~~~~~~~gi~~~~P~~~i~~~~-~~---~~~~~~~~~~~~~~~~~~i~~F~~d~~~ 346 (350)
T 1sji_A 283 VWIDPDDFPLLVAYWEKTFKIDLFKPQIGVVNVT-DA---DSVWMEIPDDDDLPTAEELEDWIEDVLS 346 (350)
T ss_dssp EEECGGGCHHHHHHHHHHCCSCTTSCEEEEEESS-SS---CEEESCSSCCSCCCCHHHHHHHHHHHHT
T ss_pred EEECchhhHHHHHHHHhhcCCCccCCcEEEEecc-cc---cccccCCCcccccCCHHHHHHHHHHHhc
Confidence 999999988888 789998 58999999874 21 1232 21 246789999999998764
No 179
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.41 E-value=1.1e-06 Score=72.85 Aligned_cols=95 Identities=13% Similarity=0.116 Sum_probs=70.5
Q ss_pred CccEEEEEeeCCCCCCCcc-chhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC-------------------------
Q psy8429 66 NYSAIVMFTALAPQRNCHI-CVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG------------------------- 119 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~-C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~------------------------- 119 (314)
+..+++.|+++ ||++ |+...|.++++++.+.+. +..+++.+..+++|..
T Consensus 26 gk~vll~F~~~----~C~~~C~~~~~~l~~l~~~~~~~-~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~ 100 (171)
T 2rli_A 26 GQWVLMYFGFT----HCPDICPDELEKLVQVVRQLEAE-PGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGST 100 (171)
T ss_dssp TSEEEEEEECT----TCSSSHHHHHHHHHHHHHHHHHS-TTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCH
T ss_pred CCEEEEEEEcC----CCCchhHHHHHHHHHHHHHHhhc-cCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCH
Confidence 34689999999 9998 999999999999998531 1123688888888732
Q ss_pred ---cchHHhCCcccCc---------------eEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 120 ---SDVFQMLRLNTAP---------------IFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 120 ---~~lf~~~~v~svP---------------tl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
.++.+.|++...| +.+++.+.|+.. ....+..+.+++.+.|++.+.
T Consensus 101 ~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~-----~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 101 KQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFT-----DYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEE-----EEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEE-----EEECCCCCHHHHHHHHHHHHH
Confidence 1578899999888 777776655532 222456788899999887653
No 180
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.40 E-value=1.1e-06 Score=74.74 Aligned_cols=102 Identities=11% Similarity=0.076 Sum_probs=71.0
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC-------------------------Cc
Q psy8429 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------------------------GS 120 (314)
Q Consensus 67 y~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~-------------------------~~ 120 (314)
..+++.|+ ++ ||++|+...|+++++++.+.+ .++.+..++.|. +.
T Consensus 32 k~vvl~F~~a~----~C~~C~~~~~~l~~~~~~~~~-----~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 102 (187)
T 1we0_A 32 KWSIVVFYPAD----FSFVCPTELEDVQKEYAELKK-----LGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQ 102 (187)
T ss_dssp SEEEEEECSCT----TCSSCTHHHHHHHHHHHHHHH-----TTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTC
T ss_pred CCEEEEEECCC----CCcchHHHHHHHHHHHHHHHH-----cCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCch
Confidence 46899999 99 999999999999999999863 357777777764 46
Q ss_pred chHHhCCcc------cCceEEEecCCCCCCCCCccceeec----ccCHHHHHHHHHhhcCCc--ceeeCCCCCc
Q psy8429 121 DVFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQRV----GYSAEAIVKWIADRTDIQ--IRVFRPPNYS 182 (314)
Q Consensus 121 ~lf~~~~v~------svPtl~~f~p~~~~~~~~~~~~~~~----~~~a~~l~~fI~~~~~~~--i~i~~p~~~~ 182 (314)
++.+.|++. ++|+++++.+.|+.. +.. .+ +.+.+++.+.|++..... .....|.+|.
T Consensus 103 ~~~~~~~v~~~~~g~~~P~~~lid~~G~i~----~~~-~g~~~~~~~~~~l~~~l~~l~~~~~~~~~~~p~~w~ 171 (187)
T 1we0_A 103 TISRQFDVLNEETGLADRGTFIIDPDGVIQ----AIE-INADGIGRDASTLINKVKAAQYVRENPGEVCPAKWE 171 (187)
T ss_dssp HHHHHTTCEETTTTEECEEEEEECTTSBEE----EEE-EECTTSCCCTTHHHHHHHHHHHHHTSTTCCC-----
T ss_pred HHHHHhCCCcCCCCceeeEEEEECCCCeEE----EEE-ecCCCCCCCHHHHHHHHHHHhhhhhCCCcccccccc
Confidence 788999999 999999997665532 111 12 236788888887655321 2334556663
No 181
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.39 E-value=8.7e-07 Score=76.13 Aligned_cols=103 Identities=10% Similarity=0.090 Sum_probs=72.2
Q ss_pred CccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC--------------------------
Q psy8429 66 NYSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------------------------- 118 (314)
Q Consensus 66 ~y~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~-------------------------- 118 (314)
+..+++.|+ ++ ||++|+...|.++++++.+.+ .++.+..++.|.
T Consensus 33 gk~vvl~F~~a~----~C~~C~~~~~~l~~l~~~~~~-----~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (198)
T 1zof_A 33 KNGVILFFWPKD----FTFVCPTEIIAFDKRVKDFHE-----KGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVA 103 (198)
T ss_dssp SSEEEEEECSCT----TCSSCCTHHHHHHHTHHHHHH-----TTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEE
T ss_pred CCcEEEEEECCC----CCCchHHHHHHHHHHHHHHHH-----cCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEE
Confidence 346899999 99 999999999999999999863 357777777764
Q ss_pred --CcchHHhCCcc-----cCceEEEecCCCCCCCCCccceeecc----cCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8429 119 --GSDVFQMLRLN-----TAPIFMHFPAKGKPKPSDTLDIQRVG----YSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (314)
Q Consensus 119 --~~~lf~~~~v~-----svPtl~~f~p~~~~~~~~~~~~~~~~----~~a~~l~~fI~~~~~~~-i~i~~p~~~~ 182 (314)
+.++.+.|++. ++|+.+++.+.|+.. ....+. .+.+++.+.|++..... -....|.||.
T Consensus 104 d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~-----~~~~g~~~~~~~~~~l~~~l~~l~~~~~~~~~~p~~w~ 174 (198)
T 1zof_A 104 DITKSISRDYDVLFEEAIALRGAFLIDKNMKVR-----HAVINDLPLGRNADEMLRMVDALLHFEEHGEVCPAGWR 174 (198)
T ss_dssp CTTSHHHHHTTCEETTTEECEEEEEEETTTEEE-----EEEEESSSCCCHHHHHHHHHHHHHHHHSSCCCCC----
T ss_pred CCchHHHHHhCCcccCCcccceEEEECCCCEEE-----EEEecCCCCCCCHHHHHHHHHHHHHhhccCCccCCcCc
Confidence 46789999999 999999997765532 111222 36788888887764211 1334577874
No 182
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.37 E-value=5.3e-07 Score=74.84 Aligned_cols=91 Identities=10% Similarity=0.149 Sum_probs=66.7
Q ss_pred CccEEEEEeeCCCCCCCcc-chhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC-------------------------
Q psy8429 66 NYSAIVMFTALAPQRNCHI-CVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG------------------------- 119 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~-C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~------------------------- 119 (314)
+..+++.|+++ ||++ |+...|+++++++.+.+.. .+++.+..+++|.+
T Consensus 35 gk~vll~f~~~----~C~~~C~~~~~~l~~~~~~~~~~~--~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~ 108 (172)
T 2k6v_A 35 DKVVLLFFGFT----RCPDVCPTTLLALKRAYEKLPPKA--QERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSP 108 (172)
T ss_dssp TSEEEEEEECT----TCSSHHHHHHHHHHHHHTTSCHHH--HTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCH
T ss_pred CCEEEEEEECC----CCcchhHHHHHHHHHHHHHhhhhc--cCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCH
Confidence 34689999999 9998 9999999999998885310 02588899988753
Q ss_pred ---cchHHhCC---------------cccCceEEEecCCCCCCCCCccceeeccc--CHHHHHHHHHhh
Q psy8429 120 ---SDVFQMLR---------------LNTAPIFMHFPAKGKPKPSDTLDIQRVGY--SAEAIVKWIADR 168 (314)
Q Consensus 120 ---~~lf~~~~---------------v~svPtl~~f~p~~~~~~~~~~~~~~~~~--~a~~l~~fI~~~ 168 (314)
.++.++|+ ++++|+++++. .|+.. ....+.. +.+++.+.|++.
T Consensus 109 ~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~-----~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 109 EAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLV-----LLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEE-----EEECHHHHTCHHHHHHHHHHC
T ss_pred HHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEE-----EEECCCCCCCHHHHHHHHHHh
Confidence 24555554 57899999999 66531 2223445 889999998865
No 183
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.30 E-value=2.5e-06 Score=70.58 Aligned_cols=90 Identities=11% Similarity=0.098 Sum_probs=64.6
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC-------C----cchHH-hC--------
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------G----SDVFQ-ML-------- 126 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~-------~----~~lf~-~~-------- 126 (314)
..+++.|+++ ||++|+...|+++++++.+.. .++.+..+++++ . .+..+ ++
T Consensus 33 k~vll~f~a~----~C~~C~~~~~~l~~l~~~~~~-----~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (170)
T 2p5q_A 33 KVLLIVNVAS----KCGMTNSNYAEMNQLYEKYKD-----QGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFD 103 (170)
T ss_dssp SEEEEEEECS----SSTTHHHHHHHHHHHHHHHGG-----GTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBC
T ss_pred CEEEEEEEec----cCCccHHHHHHHHHHHHHhcc-----CCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEe
Confidence 4689999999 999999999999999999863 348888888752 1 12223 32
Q ss_pred ---------------------Cc--ccCc---eEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 127 ---------------------RL--NTAP---IFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 127 ---------------------~v--~svP---tl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
++ +++| +.+++.+.|+.. ....+..+.+++.+.|++.+.
T Consensus 104 ~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~-----~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 104 KIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVV-----DRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp CCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEE-----EEECTTSCGGGGHHHHHHHTT
T ss_pred eeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEE-----EeeCCCCCHHHHHHHHHHHhh
Confidence 44 6788 777776655431 222455677889999888765
No 184
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.29 E-value=8.9e-07 Score=76.47 Aligned_cols=106 Identities=9% Similarity=0.098 Sum_probs=74.3
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC---------------------------
Q psy8429 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE--------------------------- 118 (314)
Q Consensus 67 y~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~--------------------------- 118 (314)
.++++.|+ ++ ||++|+...|.++++++.+.+ .++.+..++.|.
T Consensus 37 k~vvl~F~~~~----~C~~C~~~~~~l~~l~~~~~~-----~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D 107 (202)
T 1uul_A 37 KWLVLFFYPMD----FTFVCPTEICQFSDRVKEFSD-----IGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILAD 107 (202)
T ss_dssp SEEEEEECSCT----TCSHHHHHHHHHHHTHHHHHT-----TTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEEC
T ss_pred CeEEEEEECCC----CCCcCHHHHHHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEEC
Confidence 36889999 99 999999999999999999863 357778887764
Q ss_pred -CcchHHhCCcc------cCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8429 119 -GSDVFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (314)
Q Consensus 119 -~~~lf~~~~v~------svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~-i~i~~p~~~~ 182 (314)
+.++.+.|++. ++|+.+++.+.|+.... .......+.+.+++.+.|++..... -....|.||.
T Consensus 108 ~~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~-~~g~~~~~~~~~ell~~l~~l~~~~~~~~~~p~~w~ 178 (202)
T 1uul_A 108 KTKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQI-TVNDLPVGRDVDEALRLVKAFQFVEKHGEVCPANWK 178 (202)
T ss_dssp TTCHHHHHHTCEETTTTEECEEEEEECTTSBEEEE-EEECTTBCCCHHHHHHHHHHHHHHHHHSCBBCTTCC
T ss_pred CchHHHHHcCCccCCCCceeeEEEEECCCCEEEEE-EeCCCCCCCCHHHHHHHHHHhhhhhhcCCccCCCcC
Confidence 45788999999 99999999776654200 0000012356788888887654211 2344566663
No 185
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.28 E-value=1.1e-06 Score=75.49 Aligned_cols=106 Identities=12% Similarity=0.077 Sum_probs=73.5
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC---------------------------
Q psy8429 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE--------------------------- 118 (314)
Q Consensus 67 y~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~--------------------------- 118 (314)
..+++.|+ ++ ||++|+...|+++++++.+.+ .++.+..+++|.
T Consensus 35 k~vvl~F~~a~----~C~~C~~~~~~l~~l~~~~~~-----~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D 105 (197)
T 1qmv_A 35 KYVVLFFYPLD----FTFVAPTEIIAFSNRAEDFRK-----LGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLAD 105 (197)
T ss_dssp SEEEEEECSCT----TSSHHHHHHHHHHHTHHHHHT-----TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEEC
T ss_pred CeEEEEEECCC----CCCCCHHHHHHHHHHHHHHHH-----CCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEEC
Confidence 35899999 99 999999999999999999863 357777777763
Q ss_pred -CcchHHhCCcc------cCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8429 119 -GSDVFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (314)
Q Consensus 119 -~~~lf~~~~v~------svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~-i~i~~p~~~~ 182 (314)
+.++.+.|++. ++|+.+++.+.|+.... .......+.+.+++.+.|++..... -...-|.+|.
T Consensus 106 ~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~~-~~g~~~~~~~~~e~l~~l~~l~~~~~~~~~cp~~w~ 176 (197)
T 1qmv_A 106 VTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQI-TVNDLPVGRSVDEALRLVQAFQYTDEHGEVCPAGWK 176 (197)
T ss_dssp TTCHHHHHTTCEETTTTEECEEEEEECTTSBEEEE-EEECTTBCCCHHHHHHHHHHHHHHHHHCCBBCTTCC
T ss_pred CcHHHHHHcCCccCCCCceeeEEEEECCCCcEEEE-EeCCCCCCCCHHHHHHHHHhcchhhccCCccCCCcC
Confidence 34788999999 89999999776554200 0000011456788888887654211 2334456663
No 186
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.27 E-value=2.6e-06 Score=70.38 Aligned_cols=42 Identities=7% Similarity=0.057 Sum_probs=36.4
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD 117 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~ 117 (314)
..++|.|+++ ||++|+...|+++++++.+.. .++.+..++++
T Consensus 32 k~vlv~f~a~----~C~~C~~~~~~l~~l~~~~~~-----~~~~vv~v~~d 73 (169)
T 2v1m_A 32 HVCLIVNVAC----KCGATDKNYRQLQEMHTRLVG-----KGLRILAFPCN 73 (169)
T ss_dssp SEEEEEEECS----SSTTHHHHHHHHHHHHHHHGG-----GTEEEEEEECC
T ss_pred CEEEEEEeec----cCCchHHHHHHHHHHHHHhhc-----CCeEEEEEECC
Confidence 4689999999 999999999999999999863 35888888875
No 187
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.27 E-value=2.7e-06 Score=72.55 Aligned_cols=91 Identities=11% Similarity=0.129 Sum_probs=65.0
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC-------Cc----chH-H---------
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------GS----DVF-Q--------- 124 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~-------~~----~lf-~--------- 124 (314)
+..+++.|+|+ ||++|+...|+++++++.+.+ .++.+..+++|+ .+ +.. +
T Consensus 48 Gk~vll~F~at----wC~~C~~~~~~l~~l~~~~~~-----~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l 118 (190)
T 2vup_A 48 GSPLLIYNVAS----KCGYTKGGYETATTLYNKYKS-----QGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIM 118 (190)
T ss_dssp TSCEEEEEECS----SSTTHHHHHHHHHHHHHHHGG-----GTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBB
T ss_pred CCEEEEEEecC----CCCccHHHHHHHHHHHHHHhc-----CCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEE
Confidence 34689999999 999999999999999999863 248888887762 11 112 1
Q ss_pred --------------------hCCcccCc------eEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 125 --------------------MLRLNTAP------IFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 125 --------------------~~~v~svP------tl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
.+++.++| +.+++.+.|+.. ....+..+.+++.+.|++.+.
T Consensus 119 ~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~-----~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 119 AKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPV-----ERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp CCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEE-----EEECTTCCHHHHHHHHHHHHH
T ss_pred eecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEE-----EEECCCCCHHHHHHHHHHHHh
Confidence 14788898 777776655431 222355678899999887653
No 188
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.27 E-value=1.8e-06 Score=75.95 Aligned_cols=106 Identities=13% Similarity=0.135 Sum_probs=68.9
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC---------------------------
Q psy8429 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE--------------------------- 118 (314)
Q Consensus 67 y~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~--------------------------- 118 (314)
.+++++|+ ++ ||++|+...|.++++++.+.+ .++.+..+++|.
T Consensus 57 k~vll~F~pa~----~Cp~C~~~~~~l~~l~~~~~~-----~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D 127 (220)
T 1zye_A 57 KYLVLFFYPLD----FTFVCPTEIIAFSDKASEFHD-----VNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSD 127 (220)
T ss_dssp SEEEEEECSCT----TCSSSHHHHHHHHHHHHHHHH-----TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEEC
T ss_pred CeEEEEEECCC----CCCCCHHHHHHHHHHHHHHHH-----CCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEEC
Confidence 46889999 99 999999999999999999863 346677776653
Q ss_pred -CcchHHhCCcc------cCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8429 119 -GSDVFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (314)
Q Consensus 119 -~~~lf~~~~v~------svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~-i~i~~p~~~~ 182 (314)
+.++.+.|++. ++|+++++.+.|+..... ......+.+.+++.+.|++..... -...-|.+|.
T Consensus 128 ~~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~~-~g~~~~~~~~~ell~~l~~l~~~~~~~~~cp~~W~ 198 (220)
T 1zye_A 128 LTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLS-VNDLPVGRSVEETLRLVKAFQFVEAHGEVSPANWT 198 (220)
T ss_dssp TTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEE-EECTTCCCCHHHHHHHHHHHHHTTC----------
T ss_pred CcHHHHHHhCCeecCCCcccceEEEECCCCEEEEEE-ecCCCCCCCHHHHHHHHHHhhhhcccCCccCCCCC
Confidence 45789999999 999999997765542000 000012356788888887754322 3445677774
No 189
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.26 E-value=5.5e-06 Score=70.57 Aligned_cols=91 Identities=11% Similarity=0.122 Sum_probs=63.5
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC-------CCcchH---------------
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-------EGSDVF--------------- 123 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~-------~~~~lf--------------- 123 (314)
+..++|.|+|+ ||++|+...|+++++++.+.. .++.+..+++| ++++-.
T Consensus 46 Gk~vlv~F~at----wC~~C~~~~p~l~~l~~~~~~-----~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~ 116 (187)
T 3dwv_A 46 GSPLLIYNVAS----KCGYTKGGYETATTLYNKYKS-----QGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIM 116 (187)
T ss_dssp TSCEEEEEECC----BCSCCTTHHHHHHHHHHHHGG-----GTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBB
T ss_pred CCEEEEEEecC----CCCCcHHHHHHHHHHHHHhhh-----CCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCcee
Confidence 34699999999 999999999999999999863 24667777655 111111
Q ss_pred ----------------------HhCCcccCc---eEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 124 ----------------------QMLRLNTAP---IFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 124 ----------------------~~~~v~svP---tl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
..+++.++| +.+++.+.|+.. ....+..+.+++.+.|++.++
T Consensus 117 ~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~-----~~~~g~~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 117 AKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPV-----ERFSPGASVKDIEEKLIPLLG 183 (187)
T ss_dssp CCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEE-----EEECTTCCHHHHHHHHHHHC-
T ss_pred eccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEE-----EEECCCCCHHHHHHHHHHHHh
Confidence 223455777 888887665431 222355688999999988875
No 190
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.26 E-value=1.8e-06 Score=71.05 Aligned_cols=86 Identities=10% Similarity=0.035 Sum_probs=63.7
Q ss_pred cEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC-----------------------CcchH
Q psy8429 68 SAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-----------------------GSDVF 123 (314)
Q Consensus 68 ~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~-----------------------~~~lf 123 (314)
.+++.|+ ++ ||++|+...|.++++++.+.+ .++.+..++.|+ +.++.
T Consensus 38 ~vvl~F~~a~----~C~~C~~~~~~l~~~~~~~~~-----~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 108 (160)
T 1xvw_A 38 NVLLVFFPLA----FTGICQGELDQLRDHLPEFEN-----DDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVS 108 (160)
T ss_dssp EEEEEECSCT----TSSHHHHHHHHHHHTGGGTSS-----SSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHH
T ss_pred CEEEEEECCC----CCCchHHHHHHHHHHHHHHHH-----CCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHH
Confidence 5888897 99 999999999999999988752 358888888763 67889
Q ss_pred HhCCcc----cCc--eEEEecCCCCCCCCCccceeecc----cCHHHHHHHHHh
Q psy8429 124 QMLRLN----TAP--IFMHFPAKGKPKPSDTLDIQRVG----YSAEAIVKWIAD 167 (314)
Q Consensus 124 ~~~~v~----svP--tl~~f~p~~~~~~~~~~~~~~~~----~~a~~l~~fI~~ 167 (314)
+.|++. ++| +.+++.+.|+.. +.. .+. .+.+++.+.|++
T Consensus 109 ~~~~v~~~~~~~p~~~~~lid~~G~i~----~~~-~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 109 QAYGVFNEQAGIANRGTFVVDRSGIIR----FAE-MKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp HHTTCEETTTTEECSEEEEECTTSBEE----EEE-ECCTTCCCCHHHHHHHHHH
T ss_pred HHcCCccccCCCeeeeEEEECCCCeEE----EEE-ecCCCCCCCHHHHHHHHHH
Confidence 999999 999 777776655431 111 122 246777777664
No 191
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.26 E-value=1.4e-06 Score=74.37 Aligned_cols=103 Identities=14% Similarity=0.179 Sum_probs=72.8
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC---------------------------
Q psy8429 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE--------------------------- 118 (314)
Q Consensus 67 y~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~--------------------------- 118 (314)
..+++.|+ ++ ||++|+...|+++++++.+.+ .++.+..++.|.
T Consensus 32 k~vvl~F~~a~----~C~~C~~~~~~l~~~~~~~~~-----~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D 102 (192)
T 2h01_A 32 KYVLLYFYPLD----FTFVCPSEIIALDKALDSFKE-----RNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISD 102 (192)
T ss_dssp CEEEEEECSCS----SCSSCCHHHHHHHHTHHHHHH-----TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEEC
T ss_pred CeEEEEEECCC----CCCCCHHHHHHHHHHHHHHHH-----CCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEEC
Confidence 36889999 99 999999999999999999863 346677766653
Q ss_pred -CcchHHhCCcc-----cCceEEEecCCCCCCCCCcccee---ecccCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8429 119 -GSDVFQMLRLN-----TAPIFMHFPAKGKPKPSDTLDIQ---RVGYSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (314)
Q Consensus 119 -~~~lf~~~~v~-----svPtl~~f~p~~~~~~~~~~~~~---~~~~~a~~l~~fI~~~~~~~-i~i~~p~~~~ 182 (314)
+.++.+.|++. ++|+.+++.+.|+.. +... ..+.+.+++.+.|++..... -...-|.+|.
T Consensus 103 ~~~~~~~~~gv~~~~g~~~P~~~liD~~G~i~----~~~~g~~~~~~~~~~l~~~l~~l~~~~~~~~~cp~~w~ 172 (192)
T 2h01_A 103 ISKSIARSYDVLFNESVALRAFVLIDKQGVVQ----HLLVNNLALGRSVDEILRLIDALQHHEKYGDVCPANWQ 172 (192)
T ss_dssp TTSHHHHHTTCEETTTEECCEEEEECTTSBEE----EEEEGGGSSGGGHHHHHHHHHHHHHHHHHCCCCCSSCC
T ss_pred CcHHHHHHhCCcCcCCceeeEEEEEcCCCEEE----EEEeCCCCCCCCHHHHHHHHHHHhhhhhcCCCccCCCC
Confidence 35788999999 999999997765542 1110 12346788888887654211 2344567774
No 192
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.25 E-value=2.6e-06 Score=71.17 Aligned_cols=89 Identities=10% Similarity=0.048 Sum_probs=61.9
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC-------CC----cchH------------
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-------EG----SDVF------------ 123 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~-------~~----~~lf------------ 123 (314)
.++++.|+|+ ||++|+ ..|.++++++.+.+ .++.+..++++ ++ ++..
T Consensus 33 k~vll~F~a~----wC~~C~-~~~~l~~l~~~~~~-----~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~ 102 (171)
T 3cmi_A 33 KVVLIVNVAS----KCGFTP-QYKELEALYKRYKD-----EGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMK 102 (171)
T ss_dssp CEEEEEEEES----SSCCHH-HHHHHHHHHHHHGG-----GTEEEEEEEECSCC------------------CCCSCBBC
T ss_pred CEEEEEEEec----CCCcch-hHHHHHHHHHHhcc-----CCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEe
Confidence 4689999999 999999 99999999999863 34777777663 11 1111
Q ss_pred ------------------HhCCcccCc------eEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 124 ------------------QMLRLNTAP------IFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 124 ------------------~~~~v~svP------tl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
+.+++.++| +.+++.+.|+.. ....+..+.+++.+.|++.+.
T Consensus 103 d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~-----~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 103 KIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVY-----ERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp CCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEE-----EEECTTSCGGGGHHHHHHHHT
T ss_pred eccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEE-----EEeCCCCCHHHHHHHHHHHHH
Confidence 246888999 777776655431 222355677888888887654
No 193
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.22 E-value=2.1e-06 Score=75.25 Aligned_cols=91 Identities=11% Similarity=0.140 Sum_probs=59.7
Q ss_pred CCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhcc----ccCC-----------------------------CCcEE
Q psy8429 64 PRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRY----SQMY-----------------------------SNKLF 110 (314)
Q Consensus 64 ~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~----~~~~-----------------------------~~~v~ 110 (314)
++...+++.|+++ ||++|+++.|+++++++.=.. ..+. .+.+-
T Consensus 84 ~~~k~~vv~F~d~----~Cp~C~~~~~~l~~l~~~~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~ 159 (216)
T 1eej_A 84 PQEKHVITVFTDI----TCGYCHKLHEQMADYNALGITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVA 159 (216)
T ss_dssp TTCCEEEEEEECT----TCHHHHHHHTTHHHHHHTTEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCC
T ss_pred CCCCEEEEEEECC----CCHHHHHHHHHHHHHHhCCcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCC
Confidence 3455689999999 999999999999998753000 0000 00000
Q ss_pred --EEEEECCCCcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhh
Q psy8429 111 --FILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 111 --F~~vD~~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~ 168 (314)
.+..+++++.++.+++||++.|+++ +..| . .+ .|..++++|.++|++.
T Consensus 160 ~~~~~~~v~~~~~l~~~~gV~gtPt~v-~~dG-~-------~~-~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 160 PASCDVDIADHYALGVQLGVSGTPAVV-LSNG-T-------LV-PGYQPPKEMKEFLDEH 209 (216)
T ss_dssp CCCCSCCHHHHHHHHHHHTCCSSSEEE-CTTS-C-------EE-ESCCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCccCEEE-EcCC-e-------Ee-cCCCCHHHHHHHHHHh
Confidence 0122334467889999999999994 5543 1 12 4667889999998765
No 194
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.22 E-value=7.3e-07 Score=65.23 Aligned_cols=71 Identities=13% Similarity=0.293 Sum_probs=52.6
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH---hCCcccCceEEEecCCCCCCCC
Q psy8429 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ---MLRLNTAPIFMHFPAKGKPKPS 146 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~---~~~v~svPtl~~f~p~~~~~~~ 146 (314)
+++|+++ ||++|+..++.+++. ++.|..+|++++++..+ +++++++|+++ .+| +.
T Consensus 3 v~~f~~~----~C~~C~~~~~~l~~~------------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~--~~g-~~--- 60 (81)
T 1h75_A 3 ITIYTRN----DCVQCHATKRAMENR------------GFDFEMINVDRVPEAAEALRAQGFRQLPVVI--AGD-LS--- 60 (81)
T ss_dssp EEEEECT----TCHHHHHHHHHHHHT------------TCCCEEEETTTCHHHHHHHHHTTCCSSCEEE--ETT-EE---
T ss_pred EEEEcCC----CChhHHHHHHHHHHC------------CCCeEEEECCCCHHHHHHHHHhCCCccCEEE--ECC-EE---
Confidence 5789999 999999999988752 25677899998765544 58999999994 333 21
Q ss_pred CccceeecccCHHHHHHHHHhh
Q psy8429 147 DTLDIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 147 ~~~~~~~~~~~a~~l~~fI~~~ 168 (314)
.++.+.+++.+++++.
T Consensus 61 ------~~g~~~~~l~~~l~~~ 76 (81)
T 1h75_A 61 ------WSGFRPDMINRLHPAP 76 (81)
T ss_dssp ------EESCCHHHHGGGSCCC
T ss_pred ------EecCCHHHHHHHHhcc
Confidence 3567778887777554
No 195
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.21 E-value=3.7e-06 Score=70.55 Aligned_cols=84 Identities=15% Similarity=0.227 Sum_probs=61.9
Q ss_pred CCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC---------------------------
Q psy8429 64 PRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF--------------------------- 116 (314)
Q Consensus 64 ~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~--------------------------- 116 (314)
+....+|+.|+++ ||++|+.+.|+++++.+.+. ++.+...++
T Consensus 20 ~~a~v~i~~f~d~----~Cp~C~~~~~~l~~l~~~~~-------~v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~ 88 (175)
T 3gyk_A 20 PEGDVTVVEFFDY----NCPYCRRAMAEVQGLVDADP-------NVRLVYREWPILGEGSDFAARAALAARQQGKYEAFH 88 (175)
T ss_dssp TTCSEEEEEEECT----TCHHHHHHHHHHHHHHHHCT-------TEEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHH
T ss_pred CCCCEEEEEEECC----CCccHHHHHHHHHHHHHhCC-------CEEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHH
Confidence 3344678999999 99999999999999988753 355555442
Q ss_pred ------------------------------------------CCCcchHHhCCcccCceEEEecCCCCCCCCCccceeec
Q psy8429 117 ------------------------------------------DEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRV 154 (314)
Q Consensus 117 ------------------------------------------~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~ 154 (314)
+++.+..+++||+++|++++ .| + ...|
T Consensus 89 ~~lf~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g-~--------~~~G 157 (175)
T 3gyk_A 89 WALMGMSGKANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--ED-A--------LVPG 157 (175)
T ss_dssp HHHHTCSSCCSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TT-E--------EECS
T ss_pred HHHHhcCCCCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CC-E--------EeeC
Confidence 23456778999999999987 32 2 1136
Q ss_pred ccCHHHHHHHHHhhc
Q psy8429 155 GYSAEAIVKWIADRT 169 (314)
Q Consensus 155 ~~~a~~l~~fI~~~~ 169 (314)
..+.+.+.+.|.+..
T Consensus 158 ~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 158 FVEQSQLQDAVDRAR 172 (175)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 678899999987754
No 196
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.20 E-value=2.6e-06 Score=60.98 Aligned_cols=69 Identities=22% Similarity=0.342 Sum_probs=53.2
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH---hCCcccCceEEEecCCCCCCCC
Q psy8429 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ---MLRLNTAPIFMHFPAKGKPKPS 146 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~---~~~v~svPtl~~f~p~~~~~~~ 146 (314)
+++|+++ ||++|+..++.+++. ++-|..+|++++++..+ ++++.++|++.. . ++
T Consensus 3 i~~y~~~----~C~~C~~~~~~l~~~------------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~-g~---- 59 (75)
T 1r7h_A 3 ITLYTKP----ACVQCTATKKALDRA------------GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--D-GE---- 59 (75)
T ss_dssp EEEEECT----TCHHHHHHHHHHHHT------------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--T-TE----
T ss_pred EEEEeCC----CChHHHHHHHHHHHc------------CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--C-Ce----
Confidence 5789999 999999999988743 25677889998876655 899999999984 3 22
Q ss_pred CccceeecccCHHHHHHHHH
Q psy8429 147 DTLDIQRVGYSAEAIVKWIA 166 (314)
Q Consensus 147 ~~~~~~~~~~~a~~l~~fI~ 166 (314)
. .+|.+.+++.++++
T Consensus 60 ----~-~~g~~~~~l~~~l~ 74 (75)
T 1r7h_A 60 ----H-WSGFRPERIKQLQA 74 (75)
T ss_dssp ----E-EESCCHHHHHHHHC
T ss_pred ----E-EcCCCHHHHHHHHh
Confidence 1 35678888888874
No 197
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.17 E-value=4.2e-06 Score=70.76 Aligned_cols=42 Identities=12% Similarity=0.107 Sum_probs=36.1
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD 117 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~ 117 (314)
..+++.|+++ ||++|+...|+++++++.+.. +++.+..++++
T Consensus 48 k~vll~F~at----wC~~C~~~~~~l~~l~~~~~~-----~~v~vv~vs~d 89 (183)
T 2obi_A 48 FVCIVTNVAS----QCGKTEVNYTQLVDLHARYAE-----CGLRILAFPCN 89 (183)
T ss_dssp SEEEEEEECS----SSTTHHHHHHHHHHHHHHHGG-----GTEEEEEEECC
T ss_pred CEEEEEEeCC----CCCCcHHHHHHHHHHHHHHhc-----CCeEEEEEECC
Confidence 4689999999 999999999999999999863 34888888765
No 198
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.17 E-value=4.3e-06 Score=70.74 Aligned_cols=90 Identities=10% Similarity=0.039 Sum_probs=62.3
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC-------Cc----chHHh---------
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------GS----DVFQM--------- 125 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~-------~~----~lf~~--------- 125 (314)
...+++.|+|+ ||++|+...|+++++++.+.+ +++.+..+++++ .+ +..++
T Consensus 49 Gk~vlv~F~at----wC~~C~~~~p~l~~l~~~~~~-----~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~ 119 (181)
T 2p31_A 49 GSVSLVVNVAS----ECGFTDQHYRALQQLQRDLGP-----HHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMF 119 (181)
T ss_dssp TSEEEEEEECS----SSTTHHHHHHHHHHHHHHHGG-----GTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBB
T ss_pred CCEEEEEEecc----CCCCcHHHHHHHHHHHHHhhc-----CCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeE
Confidence 34689999999 999999999999999999863 348888888763 11 12222
Q ss_pred ---------------CCcccCc-------eEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 126 ---------------LRLNTAP-------IFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 126 ---------------~~v~svP-------tl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
++++++| +.+++.+.|+.. ....+..+.+++.+.|++.+
T Consensus 120 ~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~-----~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 120 SKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVV-----GAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp CCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEE-----EEECTTSCHHHHHHHHHTTC
T ss_pred eecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCCEE-----EEeCCCCCHHHHHHHHHHHh
Confidence 2355678 666665554431 22235567889999888764
No 199
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.14 E-value=3.3e-06 Score=73.93 Aligned_cols=102 Identities=13% Similarity=0.158 Sum_probs=70.9
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC---------------------------
Q psy8429 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE--------------------------- 118 (314)
Q Consensus 67 y~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~--------------------------- 118 (314)
.++++.|+ ++ ||++|+...|+++++++.+.+ .++.+.-|+.|.
T Consensus 53 k~vvl~F~pa~----~C~~C~~~~~~l~~l~~~~~~-----~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D 123 (213)
T 2i81_A 53 KYVLLYFYPLD----FTFVCPSEIIALDKALDAFHE-----RNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSD 123 (213)
T ss_dssp CEEEEEECSCT----TSSHHHHHHHHHHHTHHHHHH-----TTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEEC
T ss_pred CeEEEEEEcCC----CCCCCHHHHHHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEEC
Confidence 46889999 99 999999999999999999863 245555555443
Q ss_pred -CcchHHhCCcc-----cCceEEEecCCCCCCCCCcccee---ecccCHHHHHHHHHhhcCCc-ceeeCCCCC
Q psy8429 119 -GSDVFQMLRLN-----TAPIFMHFPAKGKPKPSDTLDIQ---RVGYSAEAIVKWIADRTDIQ-IRVFRPPNY 181 (314)
Q Consensus 119 -~~~lf~~~~v~-----svPtl~~f~p~~~~~~~~~~~~~---~~~~~a~~l~~fI~~~~~~~-i~i~~p~~~ 181 (314)
+.++.++|++. .+|+.+++.+.|+.. +... ..+.+.+++.+.|++..... -.+.-|.+|
T Consensus 124 ~~~~~~~~ygv~~~~g~~~p~~~lID~~G~i~----~~~~~~~~~~~~~~ell~~l~~l~~~~~~~~~cp~~w 192 (213)
T 2i81_A 124 ITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQ----HLLVNNLAIGRSVDEILRIIDAIQHHEKYGDVCPANW 192 (213)
T ss_dssp TTSHHHHHTTCEETTTEECEEEEEECTTSBEE----EEEEECTTCCCCHHHHHHHHHHHHHHHHHCCBCCTTC
T ss_pred CchHHHHHhCCccccCCcccEEEEECCCCEEE----EEEecCCCCCCCHHHHHHHHHHHHhhhhcCCCcCCCC
Confidence 46789999999 999999998776542 1110 12356888888887654211 133445566
No 200
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.07 E-value=7.1e-06 Score=71.73 Aligned_cols=84 Identities=7% Similarity=0.152 Sum_probs=59.0
Q ss_pred CCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEE-------------------------------
Q psy8429 64 PRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFI------------------------------- 112 (314)
Q Consensus 64 ~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~------------------------------- 112 (314)
+....+++.|+++ ||++|+.+.|+++++++. . -++.+.
T Consensus 84 ~~~k~~vv~F~d~----~Cp~C~~~~~~l~~~~~~-~------v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~ 152 (211)
T 1t3b_A 84 KNEKHVVTVFMDI----TCHYCHLLHQQLKEYNDL-G------ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEA 152 (211)
T ss_dssp TTCSEEEEEEECT----TCHHHHHHHTTHHHHHHT-T------EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHH
T ss_pred CCCCEEEEEEECC----CCHhHHHHHHHHHHHHhC-C------cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHH
Confidence 3445688999999 999999999999997652 0 011111
Q ss_pred -----------EEECCCCcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhh
Q psy8429 113 -----------LVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 113 -----------~vD~~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~ 168 (314)
+.+++++.++.+++||++.|++++ .+| +. + .|..++++|.++|++.
T Consensus 153 ~~~~~~~~~~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG-~~-------~-~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 153 EKGNLPKEVKTPNIVKKHYELGIQFGVRGTPSIVT-STG-EL-------I-GGYLKPADLLRALEET 209 (211)
T ss_dssp HTTCCCSSCCCSSHHHHHHHHHHHHTCCSSCEEEC-TTS-CC-------C-CSCCCHHHHHHHHHHC
T ss_pred HcCCCCChHHHHHHHHHHHHHHHHcCCCcCCEEEE-eCC-EE-------e-cCCCCHHHHHHHHHhc
Confidence 122334567889999999999987 544 21 1 3556899999999763
No 201
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.03 E-value=1.1e-05 Score=71.10 Aligned_cols=104 Identities=13% Similarity=0.097 Sum_probs=76.3
Q ss_pred CeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 47 AVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 47 ~VI~Lt~-~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
.+++|++ +++++++. . +-.++|-|.++ | |....|+|+++|+.+. ++.|+.. .+++++++
T Consensus 10 ~~~~l~s~~~~~~~l~-~--~~v~vVgff~~----~---~~~~~~~f~~~A~~l~-------~~~F~~t---~~~~v~~~ 69 (227)
T 4f9z_D 10 EPTWLTDVPAAMEFIA-A--TEVAVIGFFQD----L---EIPAVPILHSMVQKFP-------GVSFGIS---TDSEVLTH 69 (227)
T ss_dssp CCEECCSHHHHHHHHH-T--SSEEEEEECSC----S---CSTHHHHHHHHTTTCT-------TSEEEEE---CCHHHHHH
T ss_pred CCeeeCCHHHHHHHHh-c--CCeEEEEEecC----C---CchhHHHHHHHHHhCC-------CceEEEE---CCHHHHHH
Confidence 4778855 89999874 3 33577888887 7 6789999999998873 4778764 46889999
Q ss_pred CCcccCceEEEecCCCCCCCCCcccee-ecccCHHHHHHHHHhhcCCcc
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQ-RVGYSAEAIVKWIADRTDIQI 173 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~-~~~~~a~~l~~fI~~~~~~~i 173 (314)
++++. |++.+|++..+. ...|+-. .++++++.|.+||+++.-..+
T Consensus 70 ~~v~~-p~i~lfk~~~~~--~~~~~~~~~g~~~~~~l~~fi~~~~~plv 115 (227)
T 4f9z_D 70 YNITG-NTICLFRLVDNE--QLNLEDEDIESIDATKLSRFIEINSLHMV 115 (227)
T ss_dssp TTCCS-SEEEEEETTTTE--EEEECHHHHHTCCHHHHHHHHHHHCCCSE
T ss_pred cCCCC-CeEEEEEecCcc--cccccccccCCCCHHHHHHHHHHhCCCce
Confidence 99998 999999974211 1122210 046899999999999865444
No 202
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.01 E-value=3.5e-05 Score=72.84 Aligned_cols=130 Identities=15% Similarity=0.142 Sum_probs=91.2
Q ss_pred HHHHHHHHhhhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEE
Q psy8429 33 GDRVLHLSEMNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFI 112 (314)
Q Consensus 33 ~~~~~~L~~l~~~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~ 112 (314)
.+.+.+..+.....-|.++|.+|+.++.. ++.....+++|... +|+.|.++.++++++|+.+... +++.|+
T Consensus 215 ~~~l~~fi~~~~~p~v~elt~~~~~~~~~-~~~~~~~~~~f~~~----~~~~~~~~~~~l~~vA~~~~~~----~ki~F~ 285 (367)
T 3us3_A 215 EEEIVNFVEEHRRSTLRKLKPESMYETWE-DDMDGIHIVAFAEE----ADPDGYEFLEILKSVAQDNTDN----PDLSII 285 (367)
T ss_dssp HHHHHHHHHHTCSCSEEECCGGGHHHHHH-SCBTTEEEEEECCT----TSHHHHHHHHHHHHHHHHTTTC----TTCCEE
T ss_pred HHHHHHHHHHcCccceeecChhhHHHHHh-hccCCcEEEEEEcC----CChhHHHHHHHHHHHHHHcCCC----CceEEE
Confidence 34444444333334599999999988764 32222345668777 8999999999999999999721 269999
Q ss_pred EEECCCCcchH----HhCCcc-cCceEEEecCCCCCCCCCccceee--cccCHHHHHHHHHhhcCCcc
Q psy8429 113 LVDFDEGSDVF----QMLRLN-TAPIFMHFPAKGKPKPSDTLDIQR--VGYSAEAIVKWIADRTDIQI 173 (314)
Q Consensus 113 ~vD~~~~~~lf----~~~~v~-svPtl~~f~p~~~~~~~~~~~~~~--~~~~a~~l~~fI~~~~~~~i 173 (314)
.+|.++.+... +.+|++ +.|.+.++.+.... ...|.... +..+++.+.+|+++.+.-.+
T Consensus 286 ~id~~~~~~~l~~~~~~fgl~~~~P~~~i~~~~~~~--~~~y~~~~~~~~~t~~~i~~F~~~~~~Gkl 351 (367)
T 3us3_A 286 WIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDAD--SVWMEMDDEEDLPSAEELEDWLEDVLEGEI 351 (367)
T ss_dssp EECGGGCTTTHHHHHHHHTCCTTSCEEEEEETTTCC--EEECCCCTTSCCCCHHHHHHHHHHHHHTSS
T ss_pred EECCccchhHHHHHHHhcCCCCCCCeEEEEeccccc--ceeecCCcccccCCHHHHHHHHHHHHcCCc
Confidence 99999987654 458988 89999999875210 01232322 35789999999998875443
No 203
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=97.94 E-value=2.7e-05 Score=67.87 Aligned_cols=43 Identities=7% Similarity=-0.058 Sum_probs=36.7
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD 117 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~ 117 (314)
...++|.|+|+ ||++|++..|+++++++.|.. ..+.+..++++
T Consensus 47 Gk~vlv~Fwat----wC~~C~~e~p~l~~l~~~~~~-----~g~~vv~v~~d 89 (208)
T 2f8a_A 47 GKVLLIENVAS----LGGTTVRDYTQMNELQRRLGP-----RGLVVLGFPCN 89 (208)
T ss_dssp TSEEEEEEECS----SSTTHHHHHHHHHHHHHHHGG-----GTEEEEEEECC
T ss_pred CCEEEEEEECC----CCccHHHHHHHHHHHHHHccC-----CCeEEEEEECC
Confidence 34699999999 999999999999999999863 34888888775
No 204
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.93 E-value=1.9e-05 Score=70.49 Aligned_cols=88 Identities=10% Similarity=0.112 Sum_probs=60.3
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC------------------------------
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF------------------------------ 116 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~------------------------------ 116 (314)
..+++.|+.+ ||++|+++.|+++++.+. +++.|..+++
T Consensus 98 k~~v~~F~D~----~Cp~C~~~~~~l~~~~~~--------g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~ 165 (241)
T 1v58_A 98 PVIVYVFADP----FCPYCKQFWQQARPWVDS--------GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEAS 165 (241)
T ss_dssp SEEEEEEECT----TCHHHHHHHHHHHHHHHT--------TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHT
T ss_pred CeEEEEEECC----CChhHHHHHHHHHHHHhC--------CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHH
Confidence 4578999999 999999999999876653 2354444333
Q ss_pred --------------------CCCcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 117 --------------------DEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 117 --------------------~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
+++.++.+++|++++|++++...+|+ +....|..++++|.++|++..+.+
T Consensus 166 ~~~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~------~~~~~G~~~~~~L~~~l~~~~~~~ 235 (241)
T 1v58_A 166 GGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENT------LQQAVGLPDQKTLNIIMGNKLQHH 235 (241)
T ss_dssp TTCCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTE------EEEEESSCCHHHHHHHTTC-----
T ss_pred hccCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCC------EEEecCCCCHHHHHHHHHHHHHhh
Confidence 22456778999999999998764332 222346678999999998776543
No 205
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.93 E-value=1.7e-05 Score=69.66 Aligned_cols=90 Identities=10% Similarity=0.107 Sum_probs=65.4
Q ss_pred CccEEEEEee-CCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC--------------------------
Q psy8429 66 NYSAIVMFTA-LAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-------------------------- 118 (314)
Q Consensus 66 ~y~vvV~FtA-~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~-------------------------- 118 (314)
...+++.|++ + ||++|+...|+++++++.+.. .++.+.-|..|.
T Consensus 69 Gk~vll~F~a~~----wC~~C~~~~p~l~~l~~~~~~-----~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~ 139 (222)
T 3ztl_A 69 GKYVVLFFYPAD----FTFVCPTEIIAFSDQVEEFNS-----RNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLA 139 (222)
T ss_dssp TSEEEEEECSCS----SCSHHHHHHHHHHHTHHHHHT-----TTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEE
T ss_pred CCeEEEEEECCC----CCCchHHHHHHHHHHHHHHHH-----CCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEe
Confidence 3468999996 8 999999999999999999863 347777776663
Q ss_pred --CcchHHhCCcc------cCceEEEecCCCCCCCCCcccee---ecccCHHHHHHHHHhh
Q psy8429 119 --GSDVFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQ---RVGYSAEAIVKWIADR 168 (314)
Q Consensus 119 --~~~lf~~~~v~------svPtl~~f~p~~~~~~~~~~~~~---~~~~~a~~l~~fI~~~ 168 (314)
+.++.+.|++. .+|+.+++.+.|+.. +... ......+++.+.|++.
T Consensus 140 D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~----~~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 140 DRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILR----QITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp CSSSHHHHHTTCBCTTTSSBCEEEEEECTTSEEE----EEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCchHHHHHcCCeecCCCCccceEEEECCCCeEE----EEEecCCCCCCCHHHHHHHHHHh
Confidence 34678899999 899999998766542 1110 1123567777777654
No 206
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.92 E-value=2.7e-05 Score=64.51 Aligned_cols=87 Identities=9% Similarity=0.025 Sum_probs=60.4
Q ss_pred cEEEEEeeCCCCCC-CccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC-----------------------CCcchH
Q psy8429 68 SAIVMFTALAPQRN-CHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-----------------------EGSDVF 123 (314)
Q Consensus 68 ~vvV~FtA~~~~~~-C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~-----------------------~~~~lf 123 (314)
.+++.|+++ | |++|+...|.++++++++ . ++.+..++.| .+.++.
T Consensus 46 ~~vl~F~~~----~~C~~C~~~~~~l~~l~~~~-~------~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 114 (167)
T 2jsy_A 46 VTIISVIPS----IDTGVCDAQTRRFNEEAAKL-G------DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFG 114 (167)
T ss_dssp CEEEEECSC----STTSHHHHTHHHHHHHHHHH-S------SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHH
T ss_pred eEEEEEecC----CCCCchHHHHHHHHHHHHHc-C------CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHH
Confidence 589999999 9 999999999999999988 2 2445555444 235677
Q ss_pred HhCCccc------CceEEEecCCCCCCCCCcccee----ecccCHHHHHHHHHhhc
Q psy8429 124 QMLRLNT------APIFMHFPAKGKPKPSDTLDIQ----RVGYSAEAIVKWIADRT 169 (314)
Q Consensus 124 ~~~~v~s------vPtl~~f~p~~~~~~~~~~~~~----~~~~~a~~l~~fI~~~~ 169 (314)
+.|++.. .|+.+++.+.|+.. +... ....+.+++.+.|++.+
T Consensus 115 ~~~~v~~~~~g~~~p~~~lid~~G~i~----~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 115 EAFGVYIKELRLLARSVFVLDENGKVV----YAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp HHTTCBBTTTCSBCCEEEEECTTSCEE----EEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred HHhCCccccCCceeeEEEEEcCCCcEE----EEEecCCcCCCCCHHHHHHHHHHhh
Confidence 8888887 49888887765531 1110 01224578888887653
No 207
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.92 E-value=8.1e-05 Score=61.45 Aligned_cols=112 Identities=16% Similarity=0.275 Sum_probs=80.8
Q ss_pred CeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC--CCCcchHH
Q psy8429 47 AVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF--DEGSDVFQ 124 (314)
Q Consensus 47 ~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~--~~~~~lf~ 124 (314)
-|.++|.+|+.++. +++.+- .+++|... .-..=..+++.++++|+.+. +++.|+.+|. +++....+
T Consensus 15 LV~e~t~en~~~~~-~~~~~~-~~l~f~~~----~~~~~~~~~~~~~~vAk~fk------gki~Fv~vd~~~~~~~~~l~ 82 (147)
T 3bj5_A 15 LVIEFTEQTAPKIF-GGEIKT-HILLFLPK----SVSDYDGKLSNFKTAAESFK------GKILFAFIDSDHTDNQRILE 82 (147)
T ss_dssp CEEECCTTTHHHHH-SSSCCE-EEEEECCT----TSSSHHHHHHHHHHHHHTTT------TTCEEEEECTTCGGGHHHHH
T ss_pred eeEEeccccHHHHh-cCCCce-EEEEEecC----CcHhHHHHHHHHHHHHHHcC------CceEEEEEecchHhHHHHHH
Confidence 38999999999985 454332 23345543 11225678999999999986 5899999999 56777899
Q ss_pred hCCccc--CceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCcc
Q psy8429 125 MLRLNT--APIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQI 173 (314)
Q Consensus 125 ~~~v~s--vPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~i 173 (314)
.||++. +|.+.++..++.. ..|....+..+++.+.+|+.+.+.-.+
T Consensus 83 ~fGl~~~~~P~v~i~~~~~~~---~Ky~~~~~~~t~~~i~~Fv~d~l~GkL 130 (147)
T 3bj5_A 83 FFGLKKEECPAVRLITLEEEM---TKYKPESEELTAERITEFCHRFLEGKI 130 (147)
T ss_dssp HTTCCGGGCSEEEEEECSSSC---EEECCSCCCCCHHHHHHHHHHHHTTCS
T ss_pred HcCCCcccCCEEEEEeccccc---ccCCCCcccCCHHHHHHHHHHHHcCCc
Confidence 999996 9999998752111 124332356789999999999886443
No 208
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.89 E-value=3.9e-05 Score=63.11 Aligned_cols=90 Identities=9% Similarity=0.086 Sum_probs=62.4
Q ss_pred cEEEEEee-CCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC---------------------CCcchHHh
Q psy8429 68 SAIVMFTA-LAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD---------------------EGSDVFQM 125 (314)
Q Consensus 68 ~vvV~FtA-~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~---------------------~~~~lf~~ 125 (314)
++++.|++ + ||++|+.-.|.++++.+.+.+ .++.+.-+..| ...++.+.
T Consensus 37 ~~vl~F~~~~----~c~~C~~~~~~l~~~~~~~~~-----~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (163)
T 3gkn_A 37 WLVIYFYPKD----STPGATTEGLDFNALLPEFDK-----AGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRA 107 (163)
T ss_dssp CEEEEECSCT----TSHHHHHHHHHHHHHHHHHHH-----TTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHH
T ss_pred cEEEEEeCCC----CCCcHHHHHHHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHH
Confidence 58889997 8 999999999999999998863 23444444444 34577888
Q ss_pred CCccc------------CceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhh
Q psy8429 126 LRLNT------------APIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 126 ~~v~s------------vPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~ 168 (314)
|++.. .|+.+++.+.|+.. ..+.-...+.+.+++.+.+++.
T Consensus 108 ~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~--~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 108 FDVIKEKNMYGKQVLGIERSTFLLSPEGQVV--QAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp TTCEEEEEETTEEEEEECCEEEEECTTSCEE--EEECSCCSTTHHHHHHHHHHHH
T ss_pred hCCccccccccccccCcceEEEEECCCCeEE--EEEcCCCcccCHHHHHHHHHHH
Confidence 99987 99999998776542 0110001123467777777664
No 209
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=97.87 E-value=3.1e-05 Score=65.66 Aligned_cols=42 Identities=10% Similarity=0.000 Sum_probs=35.8
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD 117 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~ 117 (314)
..+++.|+|+ ||++|+...|+++++++.+.+ .++.+..+++|
T Consensus 50 k~vlv~F~at----wC~~C~~~~~~l~~l~~~~~~-----~~v~vv~is~d 91 (185)
T 2gs3_A 50 FVCIVTNVAS----QGGKTEVNYTQLVDLHARYAE-----CGLRILAFPCN 91 (185)
T ss_dssp SEEEEEEECS----SSTTHHHHHHHHHHHHHHHGG-----GTEEEEEEECC
T ss_pred CEEEEEEecC----CCCchHHHHHHHHHHHHHhhc-----CCeEEEEEECc
Confidence 4689999999 999999999999999999863 34788888765
No 210
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.86 E-value=8.5e-06 Score=62.54 Aligned_cols=64 Identities=16% Similarity=0.217 Sum_probs=45.9
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC-------cchHHhC
Q psy8429 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG-------SDVFQML 126 (314)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~-------~~lf~~~ 126 (314)
+.+++.+. .+ .+++|+++ ||++|+.++|.+++.+..+ ++ |..+|++++ +++.+.+
T Consensus 3 ~~~~~~i~-~~----~v~~f~~~----~C~~C~~~~~~L~~~~~~~-------~~--~~~vdi~~~~~~~~~~~~l~~~~ 64 (105)
T 1kte_A 3 AFVNSKIQ-PG----KVVVFIKP----TCPFCRKTQELLSQLPFKE-------GL--LEFVDITATSDTNEIQDYLQQLT 64 (105)
T ss_dssp HHHHHHCC-TT----CEEEEECS----SCHHHHHHHHHHHHSCBCT-------TS--EEEEEGGGSTTHHHHHHHHHHHH
T ss_pred hHHHhhcc-cC----CEEEEEcC----CCHhHHHHHHHHHHcCCCC-------Cc--cEEEEccCCCCHHHHHHHHHHHh
Confidence 34566652 21 36789999 9999999999998755332 12 556777775 2577889
Q ss_pred CcccCceEE
Q psy8429 127 RLNTAPIFM 135 (314)
Q Consensus 127 ~v~svPtl~ 135 (314)
++.++|+++
T Consensus 65 g~~~vP~i~ 73 (105)
T 1kte_A 65 GARTVPRVF 73 (105)
T ss_dssp SCCCSCEEE
T ss_pred CCCCcCeEE
Confidence 999999984
No 211
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.85 E-value=5.1e-05 Score=63.76 Aligned_cols=89 Identities=12% Similarity=0.064 Sum_probs=61.4
Q ss_pred ccEEEEEeeCCCCCC-CccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC--------------C--------CcchH
Q psy8429 67 YSAIVMFTALAPQRN-CHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD--------------E--------GSDVF 123 (314)
Q Consensus 67 y~vvV~FtA~~~~~~-C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~--------------~--------~~~lf 123 (314)
..+++.|+++ | |++|+...|+++++++. . ++.|..|+.| + +.++.
T Consensus 45 k~vvl~F~~t----~~C~~C~~~~~~l~~l~~~-~-------~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 112 (175)
T 1xvq_A 45 KSVLLNIFPS----VDTPVCATSVRTFDERAAA-S-------GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFG 112 (175)
T ss_dssp SCEEEEECSC----CCSSCCCHHHHHHHHHHHH-T-------TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHH
T ss_pred CEEEEEEEeC----CCCchHHHHHHHHHHHHhh-c-------CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHH
Confidence 3589999999 8 99999999999999876 2 3555555554 1 46788
Q ss_pred HhCCcccC---------ceEEEecCCCCCCCCCccceee----cccCHHHHHHHHHhhcCC
Q psy8429 124 QMLRLNTA---------PIFMHFPAKGKPKPSDTLDIQR----VGYSAEAIVKWIADRTDI 171 (314)
Q Consensus 124 ~~~~v~sv---------Ptl~~f~p~~~~~~~~~~~~~~----~~~~a~~l~~fI~~~~~~ 171 (314)
+.|++... |+.+++.+.|+.. +.... ...+.+++.+.+.+..|.
T Consensus 113 ~~~gv~~~~~~~~g~~~p~~~lid~~G~I~----~~~~g~~~~~~~~~~~~l~~l~~~~~~ 169 (175)
T 1xvq_A 113 EDYGVTIADGPMAGLLARAIVVIGADGNVA----YTELVPEIAQEPNYEAALAALGATSGS 169 (175)
T ss_dssp HHTTCBBCSSTTTTSBCSEEEEECTTSBEE----EEEECSBTTCCCCHHHHHHHHHHTC--
T ss_pred HHhCCcccccccCCcccceEEEECCCCeEE----EEEECCCcCCCCCHHHHHHHHHhhcCc
Confidence 99999887 8888887766542 11110 122567777777766664
No 212
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=97.85 E-value=2.1e-05 Score=66.34 Aligned_cols=42 Identities=10% Similarity=0.126 Sum_probs=36.1
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD 117 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~ 117 (314)
..++|.|+|+ ||++|+...|+++++++.+.. .++.+..+.++
T Consensus 39 k~vlv~F~at----wC~~C~~~~p~l~~l~~~~~~-----~~~~vi~is~d 80 (180)
T 3kij_A 39 KVSLVVNVAS----DCQLTDRNYLGLKELHKEFGP-----SHFSVLAFPCN 80 (180)
T ss_dssp SEEEEEEECS----SSTTHHHHHHHHHHHHHHHTT-----TSEEEEEEECC
T ss_pred CEEEEEEEec----CCCCcHHHHHHHHHHHHHhcc-----CCeEEEEEECC
Confidence 4799999999 999999999999999999863 35888888765
No 213
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.82 E-value=5.5e-05 Score=57.63 Aligned_cols=76 Identities=14% Similarity=0.270 Sum_probs=57.4
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhC-----CcccCceEEEecCCCCCC
Q psy8429 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML-----RLNTAPIFMHFPAKGKPK 144 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~-----~v~svPtl~~f~p~~~~~ 144 (314)
|+.|+.+ ||+.|++.+.-+++ .++-|-.+|++++++..+.+ |-+++|++++ .+| ..
T Consensus 6 I~vYs~~----~Cp~C~~aK~~L~~------------~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i-~Dg-~~- 66 (92)
T 2lqo_A 6 LTIYTTS----WCGYCLRLKTALTA------------NRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKF-ADG-ST- 66 (92)
T ss_dssp EEEEECT----TCSSHHHHHHHHHH------------TTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEE-TTS-CE-
T ss_pred EEEEcCC----CCHhHHHHHHHHHh------------cCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEE-eCC-EE-
Confidence 6789999 99999998876653 24778899999987655443 7889999874 443 21
Q ss_pred CCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 145 PSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 145 ~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
..+.+.+++.++|++..|..
T Consensus 67 --------l~~~~~~el~~~L~el~gL~ 86 (92)
T 2lqo_A 67 --------LTNPSADEVKAKLVKIAGLE 86 (92)
T ss_dssp --------EESCCHHHHHHHHHHHHCCS
T ss_pred --------EeCCCHHHHHHHHHHhcCCc
Confidence 24567889999999988865
No 214
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.80 E-value=2.3e-05 Score=67.51 Aligned_cols=93 Identities=18% Similarity=0.256 Sum_probs=58.3
Q ss_pred ccEEEEEeeCCCCCCCcc-chhhHHHHHHHHHHhccccCCCCcEEEEEEECCC---------------------------
Q psy8429 67 YSAIVMFTALAPQRNCHI-CVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE--------------------------- 118 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~-C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~--------------------------- 118 (314)
..++|.|+++ ||++ |+...|.++++.+.+.+..+ +++.+..|++|.
T Consensus 42 k~vlv~F~at----~C~~vC~~~~~~l~~l~~~~~~~~~--~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d 115 (200)
T 2b7k_A 42 KFSIIYFGFS----NCPDICPDELDKLGLWLNTLSSKYG--ITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFD 115 (200)
T ss_dssp SCEEEEEECT----TCCSHHHHHHHHHHHHHHHHHHHHC--CCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHH
T ss_pred CEEEEEEECC----CCcchhHHHHHHHHHHHHHHHHhhC--CceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHH
Confidence 4689999999 9998 99999999998888763211 245566666552
Q ss_pred -CcchHHhCCcc-cCc---------------eEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 119 -GSDVFQMLRLN-TAP---------------IFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 119 -~~~lf~~~~v~-svP---------------tl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
..++.+.|++. +.| +.+++.+.|+.. ....+..+.+++.+.|.+.+.
T Consensus 116 ~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~-----~~~~g~~~~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 116 EVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFV-----DALGRNYDEKTGVDKIVEHVK 179 (200)
T ss_dssp HHHHHHHHTTC--------------CTTTCCCEEEECTTSCEE-----EEECTTCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEE-----EEeCCCCCHHHHHHHHHHHHH
Confidence 13467788887 444 667776665431 122344555566666655544
No 215
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=97.80 E-value=0.00013 Score=60.25 Aligned_cols=92 Identities=13% Similarity=0.114 Sum_probs=62.7
Q ss_pred ccEEEEEeeCCCCCCCc-cchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC---Cc----------------------
Q psy8429 67 YSAIVMFTALAPQRNCH-ICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE---GS---------------------- 120 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~-~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~---~~---------------------- 120 (314)
..+++.|+++ ||+ +|+...|+++++.+.+.+. .+++.+..|++|. .+
T Consensus 34 k~vll~f~~~----~C~~~C~~~~~~l~~l~~~~~~~---~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d 106 (174)
T 1xzo_A 34 EVWLADFIFT----NCETICPPMTAHMTDLQKKLKAE---NIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTG 106 (174)
T ss_dssp CCEEEEEECS----CCSSCCCSHHHHHHHHHHHHHHT---TCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBC
T ss_pred CEEEEEEEcC----CCcchhHHHHHHHHHHHHHhhhc---CCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeC
Confidence 3589999999 999 9999999999999998642 1147777777762 11
Q ss_pred ---chHHh----------------CCcccCceEEEecCCCCCCCCCccceeeccc--CHHHHHHHHHhhcC
Q psy8429 121 ---DVFQM----------------LRLNTAPIFMHFPAKGKPKPSDTLDIQRVGY--SAEAIVKWIADRTD 170 (314)
Q Consensus 121 ---~lf~~----------------~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~--~a~~l~~fI~~~~~ 170 (314)
++.+. +++.+.|+.+++.+.|+.. ....+.. +.+++.+.|++.+.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~-----~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 107 YSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVL-----KDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp SCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEE-----EEEESSSSCCHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEE-----EEEcCCCCCCHHHHHHHHHHHHh
Confidence 11122 2456788888887765431 1112332 57899999988764
No 216
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.79 E-value=1e-05 Score=63.60 Aligned_cols=55 Identities=20% Similarity=0.299 Sum_probs=43.1
Q ss_pred EEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCc-------chHHhCCcccCceEEE
Q psy8429 69 AIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS-------DVFQMLRLNTAPIFMH 136 (314)
Q Consensus 69 vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~-------~lf~~~~v~svPtl~~ 136 (314)
.+++|+++ ||++|+.++|.+++.+.. .++ |..+|+++++ ++.+.++++++|++++
T Consensus 20 ~vv~f~~~----~Cp~C~~~~~~L~~~~~~-------~~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i 81 (114)
T 2hze_A 20 KVTIFVKY----TCPFCRNALDILNKFSFK-------RGA--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF 81 (114)
T ss_dssp CEEEEECT----TCHHHHHHHHHHTTSCBC-------TTS--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE
T ss_pred CEEEEEeC----CChhHHHHHHHHHHcCCC-------cCc--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE
Confidence 47889999 999999999988754321 122 7789998875 7888999999999854
No 217
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.75 E-value=2.2e-05 Score=70.74 Aligned_cols=106 Identities=13% Similarity=0.137 Sum_probs=72.5
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC---------------------------
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE--------------------------- 118 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~--------------------------- 118 (314)
.+.++++|+++ ||++|....|.+.++++.+.+ .++.+.-+++|.
T Consensus 34 K~vVL~~fpa~----~CpvC~tEl~~l~~l~~ef~~-----~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~ 104 (249)
T 3a2v_A 34 KWFVLFSHPAD----FTPVCTTEFVSFARRYEDFQR-----LGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADP 104 (249)
T ss_dssp CEEEEECCSCT----TCHHHHHHHHHHHHTHHHHHH-----TTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECT
T ss_pred CEEEEEEEcCC----CCcChHHHHHHHHHHHHHHHh-----CCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECC
Confidence 35566788999 999999999999999999864 346666666643
Q ss_pred CcchHHhCCcc-------cCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc-ceeeCCCCC
Q psy8429 119 GSDVFQMLRLN-------TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ-IRVFRPPNY 181 (314)
Q Consensus 119 ~~~lf~~~~v~-------svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~-i~i~~p~~~ 181 (314)
+.++.+.|++. ++|+++++.+.|+......++. ..+++.+++.+.|.+..... -.+..|.||
T Consensus 105 ~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~-~~gr~~~Ellr~I~alq~~~~~~~~~Pa~W 174 (249)
T 3a2v_A 105 QGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPM-ELGRLVDEILRIVKALKLGDSLKRAVPADW 174 (249)
T ss_dssp TSHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECT-TBCCCHHHHHHHHHHHHHHHHHTCBBCTTT
T ss_pred chHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCC-cccchhHHHHHHHHHHHhccccCccCCCCC
Confidence 45788999997 8999999987765421011111 12467888888887643211 234455666
No 218
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.67 E-value=2.8e-05 Score=58.17 Aligned_cols=69 Identities=19% Similarity=0.346 Sum_probs=51.5
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC-----CC----cchHHhCCcccCceEEEecCC
Q psy8429 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-----EG----SDVFQMLRLNTAPIFMHFPAK 140 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~-----~~----~~lf~~~~v~svPtl~~f~p~ 140 (314)
+++|+++ ||++|+..++.+++.. +-|-.+|++ +. +++.+.++..++|++.+ .+
T Consensus 14 v~ly~~~----~Cp~C~~~~~~L~~~g------------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g 75 (92)
T 3ic4_A 14 VLMYGLS----TCPHCKRTLEFLKREG------------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GD 75 (92)
T ss_dssp SEEEECT----TCHHHHHHHHHHHHHT------------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TT
T ss_pred EEEEECC----CChHHHHHHHHHHHcC------------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CC
Confidence 6789999 9999999999888653 223346666 33 56667889999999987 32
Q ss_pred CCCCCCCccceeecccCHHHHHHHHH
Q psy8429 141 GKPKPSDTLDIQRVGYSAEAIVKWIA 166 (314)
Q Consensus 141 ~~~~~~~~~~~~~~~~~a~~l~~fI~ 166 (314)
+ . .+|.+.+++.++++
T Consensus 76 -~--------~-i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 76 -K--------H-VLGYNEEKLKELIR 91 (92)
T ss_dssp -E--------E-EESCCHHHHHHHHH
T ss_pred -E--------E-EeCCCHHHHHHHhc
Confidence 2 1 36789999999885
No 219
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=97.61 E-value=0.00051 Score=55.07 Aligned_cols=96 Identities=13% Similarity=0.128 Sum_probs=71.9
Q ss_pred CeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHh
Q psy8429 47 AVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQM 125 (314)
Q Consensus 47 ~VI~Lt~-~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~ 125 (314)
.+.+|++ +++++++. . +-.++|-|.++ ||++| .++|.++|+.+. .+.|+..+ +++++++
T Consensus 22 ~~~~i~s~~e~e~fi~-~--~~v~VVGfF~~----~~~~~---~~~F~~~A~~~~-------d~~F~~t~---~~~v~~~ 81 (124)
T 2l4c_A 22 EPTWLTDVPAAMEFIA-A--TEVAVIGFFQD----LEIPA---VPILHSMVQKFP-------GVSFGIST---DSEVLTH 81 (124)
T ss_dssp CCEECCSHHHHHHHHH-T--SSEEEEEECSC----TTSTH---HHHHHHHHHHCT-------TSEEEEEC---CHHHHHH
T ss_pred cceEcCCHHHHHHHHh-c--CCCEEEEEECC----CCChh---HHHHHHHHHhCC-------CceEEEEC---hHHHHHH
Confidence 3566754 78899874 3 23477888888 99988 789999999972 58888774 3779999
Q ss_pred CCcccCceEEEecCCCCCCCCCccceeec----ccCHHHHHHHHHhh
Q psy8429 126 LRLNTAPIFMHFPAKGKPKPSDTLDIQRV----GYSAEAIVKWIADR 168 (314)
Q Consensus 126 ~~v~svPtl~~f~p~~~~~~~~~~~~~~~----~~~a~~l~~fI~~~ 168 (314)
++++ .|++.+|++..+ ....+ .+ ..+++.|.+||+.+
T Consensus 82 ~~v~-~~~vvlfkkfde----~~~~~-~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 82 YNIT-GNTICLFRLVDN----EQLNL-EDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp TTCC-SSCEEEEETTTT----EEEEE-CHHHHTTCCHHHHHHHHHHH
T ss_pred cCCC-CCeEEEEEcCCC----Cceee-cCcccCCCCHHHHHHHHHHh
Confidence 9999 899999997521 11222 23 57999999999875
No 220
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.57 E-value=6.7e-05 Score=57.92 Aligned_cols=65 Identities=12% Similarity=0.171 Sum_probs=44.0
Q ss_pred hhHHHHHHcCCCCccEEEEEee-CCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcc----hHHhCCc
Q psy8429 54 QKYKEYIKNGPRNYSAIVMFTA-LAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD----VFQMLRL 128 (314)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~FtA-~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~----lf~~~~v 128 (314)
+.+++.+. .+ .++ +|+. +....||++|+..++.+++.. +-|..+|++++++ +.+..+.
T Consensus 8 ~~~~~~i~-~~---~vv-vf~~g~~~~~~C~~C~~~~~~L~~~~------------i~~~~vdi~~~~~~~~~l~~~~g~ 70 (105)
T 2yan_A 8 ERLKVLTN-KA---SVM-LFMKGNKQEAKCGFSKQILEILNSTG------------VEYETFDILEDEEVRQGLKAYSNW 70 (105)
T ss_dssp HHHHHHHT-SS---SEE-EEESBCSSSBCTTHHHHHHHHHHHHT------------CCCEEEEGGGCHHHHHHHHHHHTC
T ss_pred HHHHHHhc-cC---CEE-EEEecCCCCCCCccHHHHHHHHHHCC------------CCeEEEECCCCHHHHHHHHHHHCC
Confidence 45666653 22 244 4666 111129999999999887542 5578899998776 4455799
Q ss_pred ccCceEE
Q psy8429 129 NTAPIFM 135 (314)
Q Consensus 129 ~svPtl~ 135 (314)
.++|+++
T Consensus 71 ~~vP~v~ 77 (105)
T 2yan_A 71 PTYPQLY 77 (105)
T ss_dssp CSSCEEE
T ss_pred CCCCeEE
Confidence 9999985
No 221
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.54 E-value=0.00043 Score=61.68 Aligned_cols=117 Identities=12% Similarity=0.102 Sum_probs=80.4
Q ss_pred CCeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH
Q psy8429 46 KAVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ 124 (314)
Q Consensus 46 ~~VI~Lt~-~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~ 124 (314)
..|.+|++ +++++++.++. + .++|-|.++ + |....++|+++|+.+. +.+.|+.. .++++++
T Consensus 6 P~v~~l~s~~~~~~~~~~~~-~-v~vVgff~~----~---~~~~~~~F~~~A~~lr------~~~~F~~t---~~~~v~~ 67 (250)
T 3ec3_A 6 PPSKEILTLKQVQEFLKDGD-D-VVILGVFQG----V---GDPGYLQYQDAANTLR------EDYKFHHT---FSTEIAK 67 (250)
T ss_dssp CSSEECCCHHHHHHHHHHCS-S-CEEEEECSC----T---TCHHHHHHHHHHHHHT------TTCCEEEE---CCHHHHH
T ss_pred CCceecCCHHHHHHHHhcCC-C-eEEEEEEcC----C---CchHHHHHHHHHHhhh------cCcEEEEE---CcHHHHH
Confidence 45888976 78888875311 3 355666665 5 6789999999999986 46778875 3578899
Q ss_pred hCCcccCceEEEecCCCCCC--CCCccceee-cccCHHHHHHHHHhhcCCcceeeCCCCC
Q psy8429 125 MLRLNTAPIFMHFPAKGKPK--PSDTLDIQR-VGYSAEAIVKWIADRTDIQIRVFRPPNY 181 (314)
Q Consensus 125 ~~~v~svPtl~~f~p~~~~~--~~~~~~~~~-~~~~a~~l~~fI~~~~~~~i~i~~p~~~ 181 (314)
+++++. |++++|+|+.... ++....+.. ++.+.+.|.+||+.+.-.-+.-..+.|+
T Consensus 68 ~~~v~~-p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~ 126 (250)
T 3ec3_A 68 FLKVSL-GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSND 126 (250)
T ss_dssp HHTCCS-SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTTTH
T ss_pred HcCCCC-CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCccch
Confidence 999988 9999999842110 112233322 4689999999999986544444444443
No 222
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.54 E-value=0.0002 Score=60.85 Aligned_cols=41 Identities=10% Similarity=0.167 Sum_probs=33.5
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF 116 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~ 116 (314)
...+|+.|++. ||++|+.+.|.++++++.+. +++.|....+
T Consensus 25 ~~~~i~~f~d~----~Cp~C~~~~~~l~~l~~~~~------~~v~~~~~p~ 65 (192)
T 3h93_A 25 GKIEVVELFWY----GCPHCYAFEPTIVPWSEKLP------ADVHFVRLPA 65 (192)
T ss_dssp TSEEEEEEECT----TCHHHHHHHHHHHHHHHTCC------TTEEEEEEEC
T ss_pred CCCEEEEEECC----CChhHHHhhHHHHHHHHhCC------CCeEEEEEeh
Confidence 44688999999 99999999999999998774 3577766655
No 223
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.54 E-value=0.00025 Score=62.35 Aligned_cols=104 Identities=11% Similarity=0.171 Sum_probs=65.3
Q ss_pred CccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC----------------------------
Q psy8429 66 NYSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF---------------------------- 116 (314)
Q Consensus 66 ~y~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~---------------------------- 116 (314)
...+++.|+ ++ ||++|+.-.|.++++.+.+.+ .++.+.-|..
T Consensus 56 Gk~vvl~F~pat----wCp~C~~e~p~l~~l~~~~~~-----~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~ 126 (221)
T 2c0d_A 56 QKYCCLLFYPLN----YTFVCPTEIIEFNKHIKDFEN-----KNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVS 126 (221)
T ss_dssp TCEEEEEECCCC----TTTCCHHHHHHHHHTHHHHHH-----TTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEE
T ss_pred CCeEEEEEEcCC----CCCchHHHHHHHHHHHHHHHH-----CCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEE
Confidence 346899999 99 999999999999999988853 1222322222
Q ss_pred CCCcchHHhCCc-----ccCceEEEecCCCCCCCCCcccee---ecccCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8429 117 DEGSDVFQMLRL-----NTAPIFMHFPAKGKPKPSDTLDIQ---RVGYSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (314)
Q Consensus 117 ~~~~~lf~~~~v-----~svPtl~~f~p~~~~~~~~~~~~~---~~~~~a~~l~~fI~~~~~~~-i~i~~p~~~~ 182 (314)
|.+.++.+.|++ ...|+.+++.+.|+.. +... ..+.+.+++.+.|++..... -.+.-|.+|.
T Consensus 127 D~~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~----~~~~g~~~~~~~~~ell~~l~~L~~~~~~~~~cp~~W~ 197 (221)
T 2c0d_A 127 DINKDISKNYNVLYDNSFALRGLFIIDKNGCVR----HQTVNDLPIGRNVQEVLRTIDSIIHVDTSGEVCPINWK 197 (221)
T ss_dssp CTTSHHHHHTTCEETTTEECEEEEEECTTSBEE----EEEEECTTCCCCHHHHHHHHHHHHHHHHHCCSCC----
T ss_pred CCchHHHHHcCCcccCCCccceEEEECCCCeEE----EEEecCCCCCCCHHHHHHHHHHHhhhhcCCCcCCCCCC
Confidence 234567788888 4789999998766542 1110 11356788888887654221 2344567774
No 224
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.53 E-value=7.1e-05 Score=60.28 Aligned_cols=62 Identities=19% Similarity=0.426 Sum_probs=44.2
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC---cc----hHHhC
Q psy8429 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG---SD----VFQML 126 (314)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~---~~----lf~~~ 126 (314)
+.+++.+... -+++|+++ ||++|+.+++.+++.. +.|..+|++++ ++ +.+.+
T Consensus 18 ~~~~~~i~~~-----~vvvf~~~----~Cp~C~~~~~~L~~~~------------i~~~~vdid~~~~~~~~~~~l~~~~ 76 (130)
T 2cq9_A 18 NQIQETISDN-----CVVIFSKT----SCSYCTMAKKLFHDMN------------VNYKVVELDLLEYGNQFQDALYKMT 76 (130)
T ss_dssp HHHHHHHHHS-----SEEEEECS----SCSHHHHHHHHHHHHT------------CCCEEEETTTSTTHHHHHHHHHHHH
T ss_pred HHHHHHHcCC-----cEEEEEcC----CChHHHHHHHHHHHcC------------CCcEEEECcCCcCcHHHHHHHHHHh
Confidence 4455655322 24569999 9999999999988753 23456777765 43 77889
Q ss_pred CcccCceEEE
Q psy8429 127 RLNTAPIFMH 136 (314)
Q Consensus 127 ~v~svPtl~~ 136 (314)
++.++|++++
T Consensus 77 g~~~vP~l~i 86 (130)
T 2cq9_A 77 GERTVPRIFV 86 (130)
T ss_dssp SSCCSSEEEE
T ss_pred CCCCcCEEEE
Confidence 9999999853
No 225
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.53 E-value=4.6e-05 Score=60.45 Aligned_cols=64 Identities=13% Similarity=0.301 Sum_probs=46.5
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhh-HHHHHHHHHHhccccCCCCcEEEEEEECCCCc-------chHHh
Q psy8429 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSA-SDEYTIVANSFRYSQMYSNKLFFILVDFDEGS-------DVFQM 125 (314)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~-~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~-------~lf~~ 125 (314)
+.+++.+... .+++|+++ ||++|+.. ++.+++... +++-|..+|+++++ ++.+.
T Consensus 16 ~~~~~~i~~~-----~Vvvf~~~----~Cp~C~~alk~~L~~~~~---------~~i~~~~vdid~~~~~~~~~~~l~~~ 77 (118)
T 3c1r_A 16 KHVKDLIAEN-----EIFVASKT----YCPYCHAALNTLFEKLKV---------PRSKVLVLQLNDMKEGADIQAALYEI 77 (118)
T ss_dssp HHHHHHHHHS-----SEEEEECS----SCHHHHHHHHHHHTTSCC---------CGGGEEEEEGGGSTTHHHHHHHHHHH
T ss_pred HHHHHHHccC-----cEEEEEcC----CCcCHHHHHHHHHHHcCC---------CCCCeEEEECccCCChHHHHHHHHHH
Confidence 3455555322 36779999 99999998 887764331 23678889998865 57888
Q ss_pred CCcccCceEE
Q psy8429 126 LRLNTAPIFM 135 (314)
Q Consensus 126 ~~v~svPtl~ 135 (314)
++.+++|+++
T Consensus 78 ~g~~tvP~vf 87 (118)
T 3c1r_A 78 NGQRTVPNIY 87 (118)
T ss_dssp HSCCSSCEEE
T ss_pred hCCCCcCEEE
Confidence 9999999984
No 226
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.50 E-value=8.9e-05 Score=61.20 Aligned_cols=61 Identities=20% Similarity=0.437 Sum_probs=44.3
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC---c----chHHhC
Q psy8429 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG---S----DVFQML 126 (314)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~---~----~lf~~~ 126 (314)
+.+++.+.+. .+++|+++ ||++|+.++|.+++.. +-|..+|+++. + ++.+.+
T Consensus 40 ~~~~~~i~~~-----~Vvvf~~~----~Cp~C~~~k~~L~~~~------------i~~~~vdId~~~~~~~~~~~L~~~~ 98 (146)
T 2ht9_A 40 NQIQETISDN-----CVVIFSKT----SCSYCTMAKKLFHDMN------------VNYKVVELDLLEYGNQFQDALYKMT 98 (146)
T ss_dssp HHHHHHHHHC-----SEEEEECT----TCHHHHHHHHHHHHHT------------CCCEEEEGGGCTTHHHHHHHHHHHH
T ss_pred HHHHHHhcCC-----CEEEEECC----CChhHHHHHHHHHHcC------------CCeEEEECccCcCCHHHHHHHHHHh
Confidence 4566666422 24559999 9999999999988653 22455677654 4 377889
Q ss_pred CcccCceEE
Q psy8429 127 RLNTAPIFM 135 (314)
Q Consensus 127 ~v~svPtl~ 135 (314)
++.++|+++
T Consensus 99 g~~tvP~if 107 (146)
T 2ht9_A 99 GERTVPRIF 107 (146)
T ss_dssp SCCCSCEEE
T ss_pred CCCCcCeEE
Confidence 999999995
No 227
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.48 E-value=0.00076 Score=63.73 Aligned_cols=121 Identities=9% Similarity=0.010 Sum_probs=84.2
Q ss_pred HHHHHHHHhhhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCC-ccchhhHHHHHHHHHHhccccCCCCcEEE
Q psy8429 33 GDRVLHLSEMNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNC-HICVSASDEYTIVANSFRYSQMYSNKLFF 111 (314)
Q Consensus 33 ~~~~~~L~~l~~~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C-~~C~~~~pefe~vA~s~~~~~~~~~~v~F 111 (314)
.+.+.+..+...-.-+.++|.+|++++. +++ ..++++|..+ +| +.|+.+..+++++|+.+. +++.|
T Consensus 206 ~~~l~~fi~~~~~p~v~elt~~~~~~~~-~~~--~~~~v~f~~~----~~~~~~~~~~~~~~~~~~~~~------~~i~f 272 (382)
T 2r2j_A 206 FDVTYNWIQDKCVPLVREITFENGEELT-EEG--LPFLILFHMK----EDTESLEIFQNEVARQLISEK------GTINF 272 (382)
T ss_dssp HHHHHHHHHHHHSCSSEECCHHHHHHHH-TTC--CCEEEEEECT----TCCHHHHHHHHHHHHHTGGGT------TTSEE
T ss_pred HHHHHHHHHhcccCceEecChhhHHHHh-cCC--CcEEEEEecC----CchHHHHHHHHHHHHHHHHhC------CeeEE
Confidence 3444444443334569999999999975 343 3467778877 66 446777777777776654 57999
Q ss_pred EEEECCCCcchHHhCCcc--cCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 112 ILVDFDEGSDVFQMLRLN--TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 112 ~~vD~~~~~~lf~~~~v~--svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
+.+|.++.+...+.+|++ ..|.+.++..+ +. ..|....+..+++.+.+|+++...
T Consensus 273 ~~id~~~~~~~~~~~gl~~~~~P~i~i~~~~-~~---y~~~~~~~~~~~~~i~~F~~d~~~ 329 (382)
T 2r2j_A 273 LHADCDKFRHPLLHIQKTPADCPVIAIDSFR-HM---YVFGDFKDVLIPGKLKQFVFDLHS 329 (382)
T ss_dssp EEEETTTTHHHHHHTTCCGGGCSEEEEECSS-CE---EECCCSGGGGSTTHHHHHHHHHHH
T ss_pred EEEchHHhHHHHHHcCCCccCCCEEEEEcch-hc---CCCCccccccCHHHHHHHHHHHHC
Confidence 999999999999999998 68999988653 21 111111233467889999988764
No 228
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.48 E-value=0.00011 Score=56.50 Aligned_cols=55 Identities=15% Similarity=0.196 Sum_probs=42.6
Q ss_pred CCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhC-----CcccCceEE
Q psy8429 65 RNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQML-----RLNTAPIFM 135 (314)
Q Consensus 65 r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~-----~v~svPtl~ 135 (314)
++-.-+++|+++ ||+.|++.++.+++.. +-|-.+|++++++..+.+ +..++|+++
T Consensus 13 ~~~~~v~vy~~~----~Cp~C~~ak~~L~~~~------------i~y~~idI~~~~~~~~~l~~~~~g~~~vP~if 72 (99)
T 3qmx_A 13 AVSAKIEIYTWS----TCPFCMRALALLKRKG------------VEFQEYCIDGDNEAREAMAARANGKRSLPQIF 72 (99)
T ss_dssp CCCCCEEEEECT----TCHHHHHHHHHHHHHT------------CCCEEEECTTCHHHHHHHHHHTTTCCCSCEEE
T ss_pred cCCCCEEEEEcC----CChhHHHHHHHHHHCC------------CCCEEEEcCCCHHHHHHHHHHhCCCCCCCEEE
Confidence 344467889999 9999999999888642 456778999877655544 899999984
No 229
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.48 E-value=8.5e-05 Score=55.23 Aligned_cols=52 Identities=23% Similarity=0.328 Sum_probs=41.8
Q ss_pred EEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC--CCcchHHhC-CcccCceEEE
Q psy8429 69 AIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD--EGSDVFQML-RLNTAPIFMH 136 (314)
Q Consensus 69 vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~--~~~~lf~~~-~v~svPtl~~ 136 (314)
-+++|+++ ||++|+..++.+++.. +-|..+|++ ..+++.+.+ ++.++|++++
T Consensus 7 ~v~~y~~~----~C~~C~~~~~~L~~~~------------i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~~ 61 (89)
T 2klx_A 7 EIILYTRP----NCPYCKRARDLLDKKG------------VKYTDIDASTSLRQEMVQRANGRNTFPQIFI 61 (89)
T ss_dssp CEEEESCS----CCTTTHHHHHHHHHHT------------CCEEEECSCHHHHHHHHHHHHSSCCSCEEEE
T ss_pred eEEEEECC----CChhHHHHHHHHHHcC------------CCcEEEECCHHHHHHHHHHhCCCCCcCEEEE
Confidence 47789999 9999999999887632 446678887 456788888 9999999853
No 230
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.45 E-value=0.00021 Score=62.19 Aligned_cols=103 Identities=12% Similarity=0.077 Sum_probs=66.8
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC----------------------------C
Q psy8429 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF----------------------------D 117 (314)
Q Consensus 67 y~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~----------------------------~ 117 (314)
..+++.|+ ++ ||++|+.-.|.++++.+.+.+ .++.+.-|.. |
T Consensus 49 k~vvl~F~pat----~C~~C~~e~~~l~~l~~~~~~-----~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D 119 (211)
T 2pn8_A 49 KYLVFFFYPLD----FTFVCPTEIIAFGDRLEEFRS-----INTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSD 119 (211)
T ss_dssp SEEEEEECSCT----TSSHHHHHHHHHHHTHHHHHT-----TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEEC
T ss_pred CeEEEEEECCC----CCCCCHHHHHHHHHHHHHHHH-----CCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEEC
Confidence 36889999 99 999999999999999988853 1222322222 2
Q ss_pred CCcchHHhCCcc------cCceEEEecCCCCCCCCCcccee---ecccCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8429 118 EGSDVFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQ---RVGYSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (314)
Q Consensus 118 ~~~~lf~~~~v~------svPtl~~f~p~~~~~~~~~~~~~---~~~~~a~~l~~fI~~~~~~~-i~i~~p~~~~ 182 (314)
...++.+.|++. ..|+.+++.+.|+.. +... ..+.+.+++.+.|++..... -.+.-|.+|.
T Consensus 120 ~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~----~~~~g~~~~~~~~~ell~~l~~l~~~~~~~~~~p~~w~ 190 (211)
T 2pn8_A 120 LTHQISKDYGVYLEDSGHTLRGLFIIDDKGILR----QITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWK 190 (211)
T ss_dssp TTSHHHHHTTCEETTTTEECEEEEEECTTSBEE----EEEEECTTBCCCHHHHHHHHHHHHHHHHHCCBBCTTCC
T ss_pred CchHHHHHcCCcccCCCcccceEEEECCCCEEE----EEEecCCCCCCCHHHHHHHHHHhhhcccCCcccCCCCC
Confidence 345677888884 699999998776542 1110 12346788888887654211 2344566663
No 231
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.43 E-value=0.0011 Score=58.86 Aligned_cols=116 Identities=16% Similarity=0.173 Sum_probs=77.6
Q ss_pred CCCeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchH
Q psy8429 45 KKAVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF 123 (314)
Q Consensus 45 ~~~VI~Lt~-~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf 123 (314)
..+|.+|++ +..++++. . .+- ++|-|.++ | |....++|.++|+.+. +++.|+.+ .+++++
T Consensus 5 gP~v~~l~s~~~~~~~l~-~-~~v-~vvgff~~----~---~~~~~~~f~~~A~~lr------~~~~F~~~---~~~~v~ 65 (252)
T 2h8l_A 5 SPASVPLRTEEEFKKFIS-D-KDA-SIVGFFDD----S---FSEAHSEFLKAASNLR------DNYRFAHT---NVESLV 65 (252)
T ss_dssp -CCEEECCSHHHHHHHHT-S-SSC-EEEEEESC----T---TSHHHHHHHHHHHHTT------TTSCEEEE---CCHHHH
T ss_pred CCCceeecCHHHHHHHhh-c-CCe-EEEEEECC----C---CChHHHHHHHHHHhcc------cCcEEEEE---ChHHHH
Confidence 356889964 66777763 3 233 45555565 6 6677899999999986 45778777 357799
Q ss_pred HhCCcccCceEEEecCCCCCCC--CCccceeecccCHHHHHHHHHhhcCCcceeeCCCC
Q psy8429 124 QMLRLNTAPIFMHFPAKGKPKP--SDTLDIQRVGYSAEAIVKWIADRTDIQIRVFRPPN 180 (314)
Q Consensus 124 ~~~~v~svPtl~~f~p~~~~~~--~~~~~~~~~~~~a~~l~~fI~~~~~~~i~i~~p~~ 180 (314)
++++++. |++++|+|+...++ +....++.|..+.+.|.+||+.+.-..+.-..+.|
T Consensus 66 ~~~~~~~-p~i~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n 123 (252)
T 2h8l_A 66 NEYDDNG-EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDN 123 (252)
T ss_dssp HHHCSSS-EEEEEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTT
T ss_pred HHhCCCC-CcEEEEcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeeccccc
Confidence 9999997 99999998521111 11122213667999999999998654444344444
No 232
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.41 E-value=0.00079 Score=59.91 Aligned_cols=125 Identities=14% Similarity=0.192 Sum_probs=82.0
Q ss_pred hHHHHHHHHhhhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEE
Q psy8429 32 LGDRVLHLSEMNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFF 111 (314)
Q Consensus 32 ~~~~~~~L~~l~~~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F 111 (314)
..+.+.+..+...-.-|.++|.+|+.++ .++ + +++.|...+..........+...++++|+.+... .+.+.|
T Consensus 100 ~~~~l~~fi~~~~~Plv~e~t~~n~~~~-~~~--~--~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k---~~~~~F 171 (252)
T 2h8l_A 100 TSGKIKKFIQENIFGICPHMTEDNKDLI-QGK--D--LLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDA---GHKLNF 171 (252)
T ss_dssp CHHHHHHHHHHHSSCSSCEECTTTHHHH-SSS--S--EEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHT---TCCCEE
T ss_pred CHHHHHHHHHhcccCCeeecccccHhhh-cCC--C--eEEEEeecchhhcchhHHHHHHHHHHHHHHcccc---CceEEE
Confidence 3344444444333345999999999986 323 3 4455554311000011235889999999999731 134999
Q ss_pred EEEECCCCcchHHhCCc----ccCceEEEecCCCCCCCCCccceeecccCHHH--HHHHHHhhcC
Q psy8429 112 ILVDFDEGSDVFQMLRL----NTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEA--IVKWIADRTD 170 (314)
Q Consensus 112 ~~vD~~~~~~lf~~~~v----~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~--l~~fI~~~~~ 170 (314)
+.+|.++.+.+.+.||+ ...|.+.++...+ ..|.. .+..+.+. |.+|+++...
T Consensus 172 ~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~-----~ky~~-~~~~t~~~~~i~~F~~~~~~ 230 (252)
T 2h8l_A 172 AVASRKTFSHELSDFGLESTAGEIPVVAIRTAKG-----EKFVM-QEEFSRDGKALERFLQDYFD 230 (252)
T ss_dssp EEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTS-----CEEEC-CSCCCTTSHHHHHHHHHHHH
T ss_pred EEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcC-----cEecC-CcccCcchHHHHHHHHHHHC
Confidence 99999999889999999 3699999986432 23433 24566677 9999988764
No 233
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.38 E-value=4.9e-05 Score=65.83 Aligned_cols=57 Identities=11% Similarity=0.172 Sum_probs=43.9
Q ss_pred hhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHH---HHHHHHhccccCCCCcEEEEEEECCCCc
Q psy8429 53 GQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEY---TIVANSFRYSQMYSNKLFFILVDFDEGS 120 (314)
Q Consensus 53 ~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pef---e~vA~s~~~~~~~~~~v~F~~vD~~~~~ 120 (314)
..+|+.+. .......++|.|++. ||+||+.++|.+ +++++.+. +++.|.++|++.+.
T Consensus 101 g~~y~~l~-~p~~~~~~vveFf~~----~C~~C~~~~p~~~~~~~l~~~~~------~~v~~~~~~v~~~~ 160 (197)
T 1un2_A 101 GKQYTTLE-KPVAGAPQVLEFFSF----FCPHCYQFEEVLHISDNVKKKLP------EGVKMTKYHVNFMG 160 (197)
T ss_dssp TTTEEECS-SCCTTCCSEEEEECT----TCHHHHHHHHTSCHHHHHTTSSC------TTCCEEEEECSSSS
T ss_pred CCCceEcc-CCCCCCCEEEEEECC----CChhHHHhCcccccHHHHHHHCC------CCCEEEEeccCcCC
Confidence 35566543 222244689999999 999999999999 99888874 47999999998753
No 234
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.30 E-value=0.0008 Score=56.61 Aligned_cols=90 Identities=10% Similarity=0.053 Sum_probs=57.5
Q ss_pred cEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC---------------------CCcchHHh
Q psy8429 68 SAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD---------------------EGSDVFQM 125 (314)
Q Consensus 68 ~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~---------------------~~~~lf~~ 125 (314)
++++.|+ ++ ||++|+.-.|.++++.+.+.. .++.+.-|..| .+.++.+.
T Consensus 53 ~vvl~f~~~~----~c~~C~~el~~l~~l~~~~~~-----~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~ 123 (179)
T 3ixr_A 53 WLVLYFYPKD----NTPGSSTEGLEFNLLLPQFEQ-----INATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKA 123 (179)
T ss_dssp EEEEEECSCT----TSHHHHHHHHHHHHHHHHHHT-----TTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHH
T ss_pred CEEEEEEcCC----CCCchHHHHHHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHH
Confidence 4667776 88 999999999999999999863 23444444443 24467777
Q ss_pred CCccc------------CceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhh
Q psy8429 126 LRLNT------------APIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 126 ~~v~s------------vPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~ 168 (314)
|++.. .|+.+++.+.|+.. ..+.-.....+.+++.+.|++.
T Consensus 124 ~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~--~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 124 FDVIKEKTMYGRQVIGIERSTFLIGPTHRIV--EAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp TTCEEEECCC--CEEEECCEEEEECTTSBEE--EEECSCCSTTHHHHHHHHHHHH
T ss_pred cCCcccccccCcccCCcceEEEEECCCCEEE--EEEcCCCCCCCHHHHHHHHHHH
Confidence 88753 68888887765542 0110001123467777777654
No 235
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.29 E-value=0.00079 Score=55.11 Aligned_cols=57 Identities=9% Similarity=0.109 Sum_probs=41.7
Q ss_pred cEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC-------------------CCCcchHHhCC
Q psy8429 68 SAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF-------------------DEGSDVFQMLR 127 (314)
Q Consensus 68 ~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~-------------------~~~~~lf~~~~ 127 (314)
.+++.|+ ++ ||++|+.-.|+++++.+.+.+. +.+..+.+|- |.+.++.+.|+
T Consensus 37 ~vvl~f~~~~----~c~~C~~~~~~l~~~~~~~~~~----~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 108 (159)
T 2a4v_A 37 VVVFFVYPRA----STPGSTRQASGFRDNYQELKEY----AAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLG 108 (159)
T ss_dssp EEEEEECSSS----SSHHHHHHHHHHHHHHHHHTTT----CEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHT
T ss_pred eEEEEEcCCC----CCCCHHHHHHHHHHHHHHHHhC----CcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhC
Confidence 4677775 88 9999999999999999988631 1344443331 23557889999
Q ss_pred cccCc
Q psy8429 128 LNTAP 132 (314)
Q Consensus 128 v~svP 132 (314)
+...|
T Consensus 109 v~~~p 113 (159)
T 2a4v_A 109 AKKTP 113 (159)
T ss_dssp CBSSS
T ss_pred Ccccc
Confidence 99998
No 236
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.24 E-value=0.0002 Score=59.17 Aligned_cols=88 Identities=11% Similarity=0.159 Sum_probs=47.8
Q ss_pred cEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC---------------------CcchHHh
Q psy8429 68 SAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE---------------------GSDVFQM 125 (314)
Q Consensus 68 ~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~---------------------~~~lf~~ 125 (314)
.+++.|+ ++ ||++|+.-.|+++++.+.+.. ..+.+.-+..|. +.++.++
T Consensus 32 ~vvl~f~~~~----~c~~C~~e~~~l~~~~~~~~~-----~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ 102 (157)
T 4g2e_A 32 VVVLAFYPAA----FTQVCTKEMCTFRDSMAKFNQ-----VNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKK 102 (157)
T ss_dssp CEEEEECSCT----TCCC------CCSCGGGGGGG-----CSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHH
T ss_pred eEEEEecCCC----CCCccccchhhcccccccccc-----cCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHH
Confidence 4777787 88 999999999999888877753 234444444433 3455666
Q ss_pred CCcc-----------cCceEEEecCCCCCCCCCccce----eecccCHHHHHHHHHhh
Q psy8429 126 LRLN-----------TAPIFMHFPAKGKPKPSDTLDI----QRVGYSAEAIVKWIADR 168 (314)
Q Consensus 126 ~~v~-----------svPtl~~f~p~~~~~~~~~~~~----~~~~~~a~~l~~fI~~~ 168 (314)
||+. ..|+.++..+.|+.. +.. ..+..+.+++.+.|++.
T Consensus 103 ygv~~~~~~~~~~~~~~p~tflID~~G~I~----~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 103 YNVAWEFPALPGYVLAKRAVFVIDKEGKVR----YKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp TTCEEECTTSTTCEEECEEEEEECTTSBEE----EEEEESSTTCCCCHHHHHHHHHHT
T ss_pred cCCccccccCCCcceeeeeEEEECCCCEEE----EEEECCCCCCCCCHHHHHHHHHHh
Confidence 6653 356666676554431 111 01223567777777653
No 237
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.24 E-value=0.0004 Score=51.69 Aligned_cols=51 Identities=18% Similarity=0.261 Sum_probs=39.5
Q ss_pred EEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcc----hHHhCCcccCceEE
Q psy8429 69 AIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD----VFQMLRLNTAPIFM 135 (314)
Q Consensus 69 vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~----lf~~~~v~svPtl~ 135 (314)
-+++|+++ ||++|+..++.+++. ++-|..+|++++++ +.+.++..++|+++
T Consensus 7 ~v~ly~~~----~C~~C~~~~~~L~~~------------~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l~ 61 (92)
T 2khp_A 7 DVIIYTRP----GCPYCARAKALLARK------------GAEFNEIDASATPELRAEMQERSGRNTFPQIF 61 (92)
T ss_dssp CEEEEECT----TCHHHHHHHHHHHHT------------TCCCEEEESTTSHHHHHHHHHHHTSSCCCEEE
T ss_pred cEEEEECC----CChhHHHHHHHHHHc------------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE
Confidence 47789999 999999999887742 25577889987654 44478999999764
No 238
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.22 E-value=0.0012 Score=56.01 Aligned_cols=101 Identities=8% Similarity=-0.000 Sum_probs=65.2
Q ss_pred cEEEEEee-CCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC-------------------------CCCcc
Q psy8429 68 SAIVMFTA-LAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF-------------------------DEGSD 121 (314)
Q Consensus 68 ~vvV~FtA-~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~-------------------------~~~~~ 121 (314)
.+++.|++ + ||++|+.-.|+++++.+.+.+ .++.+.-+.. |.+.+
T Consensus 32 ~vvl~F~~~~----~Cp~C~~e~~~l~~~~~~~~~-----~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~ 102 (186)
T 1n8j_A 32 WSVFFFYPAD----FTFVSPTELGDVADHYEELQK-----LGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGA 102 (186)
T ss_dssp EEEEEECSCT----TCSHHHHHHHHHHHHHHHHHH-----TTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSH
T ss_pred eEEEEEECCC----CCCccHHHHHHHHHHHHHHHH-----CCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchH
Confidence 57888884 8 999999999999999988863 1233333322 23455
Q ss_pred hHHhCCcc------cCceEEEecCCCCCCCCCccceeec----ccCHHHHHHHHHhhcCCc--ceeeCCCCCc
Q psy8429 122 VFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQRV----GYSAEAIVKWIADRTDIQ--IRVFRPPNYS 182 (314)
Q Consensus 122 lf~~~~v~------svPtl~~f~p~~~~~~~~~~~~~~~----~~~a~~l~~fI~~~~~~~--i~i~~p~~~~ 182 (314)
+.+.|++. ..|+.+++.+.|+.. +.. .+ +.+.+++.+.|++..... ..+.-|.||.
T Consensus 103 ~~~~ygv~~~~~g~~~p~~~lID~~G~i~----~~~-~~~~~~~~~~~~l~~~l~~l~~~~~~p~~~~p~~w~ 170 (186)
T 1n8j_A 103 LTRNFDNMREDEGLADRATFVVDPQGIIQ----AIE-VTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWK 170 (186)
T ss_dssp HHHHTTCEETTTTEECEEEEEECTTSBEE----EEE-EECTTBCCCHHHHHHHHHHHHHHHHSTTCBBCTTCC
T ss_pred HHHHhCCccCCCCceeeEEEEECCCCeEE----EEE-ecCCCCCCCHHHHHHHHHHHHHHhhcCCCccCCCCC
Confidence 67778887 479999998766542 111 12 236788888887664321 1344567774
No 239
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.22 E-value=0.0039 Score=55.34 Aligned_cols=124 Identities=10% Similarity=0.083 Sum_probs=82.6
Q ss_pred HHHHHHHHhhhhCCCeEEeChhhHHHHHHcCCCCccEEEEEeeCCCCC-CCccchhhHHHHHHHHHHhccccCCCCcEEE
Q psy8429 33 GDRVLHLSEMNAKKAVLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQR-NCHICVSASDEYTIVANSFRYSQMYSNKLFF 111 (314)
Q Consensus 33 ~~~~~~L~~l~~~~~VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~-~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F 111 (314)
.+.+.+..+...-.-|.++|.+|+.++. .+ + +.++.|...+... .....+.++..++++|+.+. ++.|
T Consensus 103 ~~~l~~fi~~~~~Plv~e~t~~n~~~~~-~~-~--~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k-------ki~F 171 (250)
T 3ec3_A 103 ASAIKDYVVKHALPLVGHRKTSNDAKRY-SK-R--PLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP-------EYTF 171 (250)
T ss_dssp HHHHHHHHHHHSSCTEEEECTTTHHHHS-CS-S--SEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT-------TSEE
T ss_pred HHHHHHHHHHcCCCceeecCccchhhhh-cc-C--ccEEEEEecccccccchhHHHHHHHHHHHHHhhc-------ceeE
Confidence 3444444433323459999999998875 32 2 3445555432111 12335668999999999874 5999
Q ss_pred EEEECCCCcchHHhCCccc--C-ceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc
Q psy8429 112 ILVDFDEGSDVFQMLRLNT--A-PIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ 172 (314)
Q Consensus 112 ~~vD~~~~~~lf~~~~v~s--v-Ptl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~ 172 (314)
+.+|.++.+...+.||+.. . |.+.++...+ ..|....+..+++.+.+|+.+...-.
T Consensus 172 ~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~~~-----~ky~~~~~~~t~~~i~~Fv~~~~~Gk 230 (250)
T 3ec3_A 172 AIADEEDYATEVKDLGLSESGGDVNAAILDESG-----KKFAMEPEEFDSDALREFVMAFKKGK 230 (250)
T ss_dssp EEEETTTTHHHHHHTTCSSCSCSCEEEEECTTS-----CEEECCCCSCCHHHHHHHHHHHHTTC
T ss_pred EEEcHHHHHHHHHHcCCCccCCCcEEEEEcCCC-----ceecCCcccCCHHHHHHHHHHHHCCC
Confidence 9999999988899999974 4 4777765321 23544335678999999999877533
No 240
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=97.17 E-value=0.0033 Score=57.59 Aligned_cols=122 Identities=13% Similarity=0.156 Sum_probs=81.9
Q ss_pred CCchHHHHHHHHhhhhCCCeEEeCh-hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCC
Q psy8429 29 SLSLGDRVLHLSEMNAKKAVLRFDG-QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSN 107 (314)
Q Consensus 29 ~~~~~~~~~~L~~l~~~~~VI~Lt~-~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~ 107 (314)
|+-..+.+.+...-...+.+.++++ +++++++. .. +...+++|+.. ....+.|+.+|..|. +
T Consensus 126 G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~-~~-~~~~vi~fs~~---------~~~~~~f~~~A~~~~------~ 188 (298)
T 3ed3_A 126 GARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLR-KS-PKLSVVLFSKQ---------DKISPVYKSIALDWL------G 188 (298)
T ss_dssp SCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHT-SC-SSEEEEEEESS---------SSCCHHHHHHHHHTB------T
T ss_pred CCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHh-cC-CceEEEEEcCC---------CcchHHHHHHHHHhh------c
Confidence 4445566666655555677999965 77999874 32 34566677432 134589999999997 5
Q ss_pred cEEEEEEECCCCcchH--HhCC-----c-------------ccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHh
Q psy8429 108 KLFFILVDFDEGSDVF--QMLR-----L-------------NTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIAD 167 (314)
Q Consensus 108 ~v~F~~vD~~~~~~lf--~~~~-----v-------------~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~ 167 (314)
++.|+.++-++..+.. .+++ | .+.|++++|++..+ ..+.+..+..+.+.|.+||.+
T Consensus 189 ~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~----~~~~y~g~~~~~~~i~~fi~~ 264 (298)
T 3ed3_A 189 KFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKD----KFWEYEGNSINKNDISKFLRD 264 (298)
T ss_dssp TEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTT----EEEECCCSSCCHHHHHHHHHH
T ss_pred CcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCC----ceEEeccccCCHHHHHHHHHh
Confidence 7999999977655444 3444 3 67999999987421 112222245789999999998
Q ss_pred hcCC
Q psy8429 168 RTDI 171 (314)
Q Consensus 168 ~~~~ 171 (314)
..+.
T Consensus 265 ~~~~ 268 (298)
T 3ed3_A 265 TFSI 268 (298)
T ss_dssp HHTC
T ss_pred hcCC
Confidence 7664
No 241
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.14 E-value=0.00047 Score=49.80 Aligned_cols=50 Identities=16% Similarity=0.274 Sum_probs=39.1
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcc----hHHhCCcccCceEE
Q psy8429 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD----VFQMLRLNTAPIFM 135 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~----lf~~~~v~svPtl~ 135 (314)
+++|+++ ||++|+..++.+++. ++-|..+|++++++ +.+.+++.++|+++
T Consensus 3 i~~y~~~----~C~~C~~~~~~l~~~------------~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~ 56 (82)
T 1fov_A 3 VEIYTKE----TCPYCHRAKALLSSK------------GVSFQELPIDGNAAKREEMIKRSGRTTVPQIF 56 (82)
T ss_dssp EEEEECS----SCHHHHHHHHHHHHH------------TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE
T ss_pred EEEEECC----CChhHHHHHHHHHHC------------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE
Confidence 5778999 999999999988753 14466788887654 45678999999985
No 242
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.12 E-value=0.0006 Score=52.24 Aligned_cols=71 Identities=17% Similarity=0.264 Sum_probs=48.8
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC-----CcchHH----hCCcccCceEEEec
Q psy8429 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE-----GSDVFQ----MLRLNTAPIFMHFP 138 (314)
Q Consensus 68 ~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~-----~~~lf~----~~~v~svPtl~~f~ 138 (314)
.-+++|+++ ||++|+..++.+++.. +-|-.+|++. .++..+ ..+..++|++++
T Consensus 22 ~~v~ly~~~----~Cp~C~~ak~~L~~~~------------i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i-- 83 (103)
T 3nzn_A 22 GKVIMYGLS----TCVWCKKTKKLLTDLG------------VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII-- 83 (103)
T ss_dssp SCEEEEECS----SCHHHHHHHHHHHHHT------------BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--
T ss_pred CeEEEEcCC----CCchHHHHHHHHHHcC------------CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--
Confidence 347789999 9999999999888643 2234456654 134442 358999999986
Q ss_pred CCCCCCCCCccceeecccCHHHHHHHH
Q psy8429 139 AKGKPKPSDTLDIQRVGYSAEAIVKWI 165 (314)
Q Consensus 139 p~~~~~~~~~~~~~~~~~~a~~l~~fI 165 (314)
.+++ ..++.+.+++.++|
T Consensus 84 ~~~~---------~igg~~~~~l~~~L 101 (103)
T 3nzn_A 84 NDEK---------AIVGFKEKEIRESL 101 (103)
T ss_dssp TTTE---------EEESCCHHHHHHHT
T ss_pred CCCE---------EEEcCCHHHHHHHh
Confidence 2211 14788888888775
No 243
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.12 E-value=0.0012 Score=58.54 Aligned_cols=93 Identities=13% Similarity=0.132 Sum_probs=61.8
Q ss_pred CccEEEEEee-CCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC---------------------------
Q psy8429 66 NYSAIVMFTA-LAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD--------------------------- 117 (314)
Q Consensus 66 ~y~vvV~FtA-~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~--------------------------- 117 (314)
..++++.|++ + ||++|..-.|.++++++.+.+ .++.+.-|..|
T Consensus 77 Gk~vvL~F~~~~----~cp~C~~el~~l~~l~~~~~~-----~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~ 147 (240)
T 3qpm_A 77 GKYLVFFFYPLD----FTFVCPTEIIAFSDRVHEFRA-----INTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLS 147 (240)
T ss_dssp TSEEEEEECSCT----TSSHHHHHHHHHHHHHHHHHT-----TTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEE
T ss_pred CCEEEEEEECCC----CCCchHHHHHHHHHHHHHHHH-----CCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEe
Confidence 3468888998 8 999999999999999999863 12333333333
Q ss_pred -CCcchHHhCCcc------cCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhh
Q psy8429 118 -EGSDVFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 118 -~~~~lf~~~~v~------svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~ 168 (314)
...++.+.|++. ..|+.+++.+.|+.......+. ..+.+.+++.+.|++.
T Consensus 148 D~~~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~-~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 148 DLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDL-PVGRSVDETLRLVQAF 204 (240)
T ss_dssp CTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECT-TBCCCHHHHHHHHHHH
T ss_pred CchHHHHHHhCCccccCCCccceEEEEcCCCeEEEEEecCC-CCCCCHHHHHHHHHHh
Confidence 235678889988 7899999987765420000000 1245677777777654
No 244
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=97.09 E-value=0.0013 Score=57.91 Aligned_cols=107 Identities=16% Similarity=0.210 Sum_probs=68.7
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC-----------------------------
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF----------------------------- 116 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~----------------------------- 116 (314)
.+.++++|+++ ||++|..-.|.+.++++.+.+ .++.+.-+.+
T Consensus 32 ~~vvL~~~~a~----~cp~C~~el~~l~~l~~~f~~-----~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpi 102 (224)
T 1prx_A 32 SWGILFSHPRD----FTPVCTTELGRAAKLAPEFAK-----RNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPI 102 (224)
T ss_dssp SEEEEEEESCS----SCHHHHHHHHHHHHHHHHHHT-----TTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCE
T ss_pred CeEEEEEECCC----CCCCcHHHHHHHHHHHHHHHH-----CCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcce
Confidence 35566777899 999999999999999988863 1233333222
Q ss_pred --CCCcchHHhCCcc------------cCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc-ceeeCCCCC
Q psy8429 117 --DEGSDVFQMLRLN------------TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ-IRVFRPPNY 181 (314)
Q Consensus 117 --~~~~~lf~~~~v~------------svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~-i~i~~p~~~ 181 (314)
|.+.++.+.|++. ++|+++++.+.|+......+.. ..+++.+++.+.|++..... -.+..|.||
T Consensus 103 l~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~-~~gr~~~eil~~i~~l~~~~~~~~~~p~~W 181 (224)
T 1prx_A 103 IDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPA-TTGRNFDEILRVVISLQLTAEKRVATPVDW 181 (224)
T ss_dssp EECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCT-TBCCCHHHHHHHHHHHHHHHHHCEEBCTTC
T ss_pred eecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCC-CCCCCHHHHHHHHHHHHhhccCCcCCCCCC
Confidence 2345677888873 4799999988765421011111 13567888888887654321 245677777
Q ss_pred c
Q psy8429 182 S 182 (314)
Q Consensus 182 ~ 182 (314)
.
T Consensus 182 ~ 182 (224)
T 1prx_A 182 K 182 (224)
T ss_dssp C
T ss_pred C
Confidence 4
No 245
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.06 E-value=0.0021 Score=53.43 Aligned_cols=46 Identities=17% Similarity=0.173 Sum_probs=32.8
Q ss_pred CCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC
Q psy8429 63 GPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF 116 (314)
Q Consensus 63 ~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~ 116 (314)
.+.....|+.|+.. +|++|+.+.|+++++.+.+.++ +++.+...++
T Consensus 24 ~~~a~v~i~~f~D~----~Cp~C~~~~~~~~~~~~~~~~~----~~v~~~~~~~ 69 (175)
T 1z6m_A 24 ESNAPVKMIEFINV----RCPYCRKWFEESEELLAQSVKS----GKVERIIKLF 69 (175)
T ss_dssp CTTCSEEEEEEECT----TCHHHHHHHHHHHHHHHHHHHT----TSEEEEEEEC
T ss_pred CCCCCeEEEEEECC----CCcchHHHHHHHHHHHHHHhhC----CcEEEEEEeC
Confidence 33344568889998 9999999999999988887321 3455554444
No 246
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.01 E-value=0.0024 Score=53.19 Aligned_cols=94 Identities=13% Similarity=0.140 Sum_probs=61.5
Q ss_pred ccEEEEEeeCCCCCCCc-cchhhHHHHHHHHHHhccccCCCCcEEEEEEECC--C-------------------------
Q psy8429 67 YSAIVMFTALAPQRNCH-ICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD--E------------------------- 118 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~-~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~--~------------------------- 118 (314)
..+++.|+++ ||+ +|..-.|.++++.+.+.+. .+++.+.-+.+| +
T Consensus 29 k~vll~F~~t----~C~~~C~~~~~~l~~~~~~~~~~---~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~ 101 (170)
T 3me7_A 29 KPIILSPIYT----HCRAACPLITKSLLKVIPKLGTP---GKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAK 101 (170)
T ss_dssp SCEEEEEECT----TCCSHHHHHHHHHHTTHHHHCCB---TTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEES
T ss_pred CEEEEEEECC----CCCchhHHHHHHHHHHHHHhhhc---CCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCC
Confidence 3589999999 997 6999999999999988531 123444444433 1
Q ss_pred ----CcchHHhCC---------cccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCC
Q psy8429 119 ----GSDVFQMLR---------LNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (314)
Q Consensus 119 ----~~~lf~~~~---------v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~ 171 (314)
..++.+.+| +.+.|+++++.+.|+.. ..+.....+.+++.+.|++..+.
T Consensus 102 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~----~~~~g~~~~~~~i~~~l~~~~~~ 163 (170)
T 3me7_A 102 TSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIK----DYIYGVNYNYLEFVNALRLARGE 163 (170)
T ss_dssp SHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEE----EEEESSSCCHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEE----EEEeCCCCCHHHHHHHHHHhhcc
Confidence 124455544 45667888887766542 11112235789999999887663
No 247
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=96.98 E-value=0.0054 Score=53.58 Aligned_cols=42 Identities=10% Similarity=0.134 Sum_probs=33.6
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD 117 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~ 117 (314)
...+++.|+|+ ||++|+ -.|+++++.+.|.. +.+.+.-+.++
T Consensus 56 GKvvll~FwAt----~C~~c~-e~p~L~~l~~~~~~-----~g~~Vlgvs~d 97 (215)
T 2i3y_A 56 GKHILFVNVAT----YCGLTA-QYPELNALQEELKP-----YGLVVLGFPCN 97 (215)
T ss_dssp TSEEEEEEECS----SSGGGG-GHHHHHHHHHHHGG-----GTEEEEEEECC
T ss_pred CCEEEEEEeCC----CCCChH-hHHHHHHHHHHhcc-----CCeEEEEEEcc
Confidence 34689999999 999999 68999999999863 34666666654
No 248
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=96.97 E-value=0.00057 Score=53.10 Aligned_cols=50 Identities=14% Similarity=0.369 Sum_probs=36.8
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC----cc----hHHhCCcccCceEE
Q psy8429 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG----SD----VFQMLRLNTAPIFM 135 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~----~~----lf~~~~v~svPtl~ 135 (314)
+++|+++ ||++|+..++.+++.. +-|-.+|++.. ++ +.+..+..++|+++
T Consensus 21 v~vy~~~----~Cp~C~~~~~~L~~~~------------i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~if 78 (113)
T 3rhb_A 21 VVIYSKT----WCSYCTEVKTLFKRLG------------VQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNVF 78 (113)
T ss_dssp EEEEECT----TCHHHHHHHHHHHHTT------------CCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEEE
T ss_pred EEEEECC----CChhHHHHHHHHHHcC------------CCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEEE
Confidence 6789999 9999999999887532 33456777652 33 44556999999994
No 249
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=96.97 E-value=0.0019 Score=54.56 Aligned_cols=43 Identities=7% Similarity=0.131 Sum_probs=32.5
Q ss_pred CCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC
Q psy8429 64 PRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF 116 (314)
Q Consensus 64 ~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~ 116 (314)
++....|+.|+.. ||++|+.+.|+++++.+.+. +++.|..+.+
T Consensus 20 ~~~~~~i~~f~d~----~Cp~C~~~~~~l~~l~~~~~------~~v~~~~~p~ 62 (195)
T 2znm_A 20 QSGKIEVLEFFGY----FCVHCHHFDPLLLKLGKALP------SDAYLRTEHV 62 (195)
T ss_dssp SSSSEEEEEEECT----TSCCTTSSCHHHHHHHHHSC------TTEEEEEEEC
T ss_pred CCCCcEEEEEECC----CChhHHHHhHHHHHHHHHCC------CceEEEEecc
Confidence 3345678999999 99999999999999988764 2455554443
No 250
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=96.88 E-value=0.0015 Score=55.39 Aligned_cols=44 Identities=14% Similarity=0.153 Sum_probs=37.9
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG 119 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~ 119 (314)
...+++.|+++ ||++|+.+.|.++++++.+. +++.|..++++-+
T Consensus 25 ~~~~vv~f~d~----~Cp~C~~~~~~l~~l~~~~~------~~v~~~~~~~~~~ 68 (195)
T 3hd5_A 25 GKIEVLEFFAY----TCPHCAAIEPMVEDWAKTAP------QDVVLKQVPIAFN 68 (195)
T ss_dssp TCEEEEEEECT----TCHHHHHHHHHHHHHHHTCC------TTEEEEEEECCSS
T ss_pred CCeEEEEEECC----CCccHHHhhHHHHHHHHHCC------CCeEEEEEecccC
Confidence 45689999999 99999999999999998875 4689999998753
No 251
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=96.85 E-value=0.0023 Score=52.69 Aligned_cols=90 Identities=12% Similarity=0.191 Sum_probs=57.5
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHH---hcc-c----cCC-----------CC------------cE----EE
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANS---FRY-S----QMY-----------SN------------KL----FF 111 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s---~~~-~----~~~-----------~~------------~v----~F 111 (314)
..+++.|+.+ +|+.|+++.|+++++.+- |.. + +++ .+ ++ -=
T Consensus 15 ~~~vv~f~D~----~Cp~C~~~~~~l~~l~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~~~~~ 90 (147)
T 3gv1_A 15 KLKVAVFSDP----DCPFCKRLEHEFEKMTDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGSI 90 (147)
T ss_dssp CEEEEEEECT----TCHHHHHHHHHHTTCCSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCTTCCC
T ss_pred CEEEEEEECC----CChhHHHHHHHHhhcCceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCCccHH
Confidence 3578999999 999999999998764210 000 0 000 00 00 00
Q ss_pred EEEECCCCcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 112 ILVDFDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 112 ~~vD~~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
+.-+++++.++.+++||+++||+++ .+| + ...|..+.++|.++|++..+
T Consensus 91 ~~~~v~~~~~la~~~gI~gtPt~vi-~nG-~--------~i~G~~~~~~l~~~i~~~~~ 139 (147)
T 3gv1_A 91 CDNPVAETTSLGEQFGFNGTPTLVF-PNG-R--------TQSGYSPMPQLEEIIRKNQQ 139 (147)
T ss_dssp CSCSHHHHHHHHHHTTCCSSCEEEC-TTS-C--------EEESCCCTTHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHhCCCccCEEEE-ECC-E--------EeeCCCCHHHHHHHHHHHHH
Confidence 1122334678899999999999997 443 2 12466788999999987754
No 252
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=96.84 E-value=0.0018 Score=57.37 Aligned_cols=105 Identities=13% Similarity=0.111 Sum_probs=66.9
Q ss_pred cEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC-----------------------------C
Q psy8429 68 SAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF-----------------------------D 117 (314)
Q Consensus 68 ~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~-----------------------------~ 117 (314)
+++++|+ ++ ||++|..-.|.+.++.+++.+. ++.+.-+.+ |
T Consensus 31 ~vvL~f~pa~----~cpvC~~el~~l~~l~~ef~~~-----~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D 101 (233)
T 2v2g_A 31 WGVLFSHPRD----FTPVSTTELGRVIQLEGDFKKR-----GVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIAD 101 (233)
T ss_dssp EEEEEECSCS----SCHHHHHHHHHHHHTHHHHHHT-----TEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEEC
T ss_pred eEEEEEECCC----CCCCcHHHHHHHHHHHHHHHHc-----CCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEEC
Confidence 4677776 88 9999999999999998887531 122222221 2
Q ss_pred CCcchHHhCCcc------------cCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8429 118 EGSDVFQMLRLN------------TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (314)
Q Consensus 118 ~~~~lf~~~~v~------------svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~-i~i~~p~~~~ 182 (314)
.+.++.+.|++. ++|+++++.+.|+......+.. ..+++.+++.+.|++..... -.+..|.||.
T Consensus 102 ~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~-~~gr~~~eilr~l~~Lq~~~~~~~~~p~~W~ 178 (233)
T 2v2g_A 102 ETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPA-TTGRNFSEILRVIDSLQLTAQKKVATPADWQ 178 (233)
T ss_dssp TTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECT-TBCCCHHHHHHHHHHHHHHHHSSEEBCTTCC
T ss_pred ChHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCC-CCCCCHHHHHHHHHHHHhhccCCccCCCCcC
Confidence 345678888885 6899999988765421011111 22467888888887643211 2566777874
No 253
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=96.76 E-value=0.00077 Score=49.37 Aligned_cols=74 Identities=12% Similarity=0.067 Sum_probs=49.3
Q ss_pred EEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC----cchHHhCCc-----ccCceEEEecC
Q psy8429 69 AIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG----SDVFQMLRL-----NTAPIFMHFPA 139 (314)
Q Consensus 69 vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~----~~lf~~~~v-----~svPtl~~f~p 139 (314)
.+++|+++ ||++|+..++.+++.. -+..+..+|.+++ +++.+..+. .++|++++ .
T Consensus 5 ~v~ly~~~----~Cp~C~~~~~~L~~~~----------i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~ 68 (89)
T 3msz_A 5 KVKIYTRN----GCPYCVWAKQWFEENN----------IAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--D 68 (89)
T ss_dssp CEEEEECT----TCHHHHHHHHHHHHTT----------CCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--T
T ss_pred EEEEEEcC----CChhHHHHHHHHHHcC----------CCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--C
Confidence 36789999 9999999988776432 1244555666554 457777888 99999965 3
Q ss_pred CCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 140 KGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
| +. .+ ..+++.+++++..+
T Consensus 69 g-~~---------i~--g~~~i~~~~~~~~~ 87 (89)
T 3msz_A 69 D-EH---------IG--GFTELKANADKILN 87 (89)
T ss_dssp T-EE---------EE--SHHHHHHTHHHHTT
T ss_pred C-EE---------Ee--ChHHHHHHHHHHhc
Confidence 3 21 12 35667777766554
No 254
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.76 E-value=0.0022 Score=49.63 Aligned_cols=65 Identities=12% Similarity=0.146 Sum_probs=43.5
Q ss_pred hhHHHHHHcCCCCccEEEEEee-CCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcc----hHHhCCc
Q psy8429 54 QKYKEYIKNGPRNYSAIVMFTA-LAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD----VFQMLRL 128 (314)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~FtA-~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~----lf~~~~v 128 (314)
+.+++.+. .+ .++ +|+. +....||++|++.++.+++. ++-|..+|++++++ +.+..+.
T Consensus 6 ~~~~~~i~-~~---~vv-vy~~g~~~~~~Cp~C~~ak~~L~~~------------~i~~~~vdi~~~~~~~~~l~~~~g~ 68 (109)
T 1wik_A 6 SGLKVLTN-KA---SVM-LFMKGNKQEAKCGFSKQILEILNST------------GVEYETFDILEDEEVRQGLKTFSNW 68 (109)
T ss_dssp CCHHHHHT-TS---SEE-EEESSTTTCCCSSTHHHHHHHHHHT------------CSCEEEEESSSCHHHHHHHHHHHSC
T ss_pred HHHHHHhc-cC---CEE-EEEecCCCCCCCchHHHHHHHHHHc------------CCCeEEEECCCCHHHHHHHHHHhCC
Confidence 45777763 22 244 5555 11123999999999887642 35688999998765 4445688
Q ss_pred ccCceEE
Q psy8429 129 NTAPIFM 135 (314)
Q Consensus 129 ~svPtl~ 135 (314)
.++|.++
T Consensus 69 ~~vP~if 75 (109)
T 1wik_A 69 PTYPQLY 75 (109)
T ss_dssp CSSCEEE
T ss_pred CCCCEEE
Confidence 9999864
No 255
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=96.75 E-value=0.0029 Score=56.80 Aligned_cols=106 Identities=12% Similarity=0.107 Sum_probs=60.7
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC----------------------------
Q psy8429 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD---------------------------- 117 (314)
Q Consensus 67 y~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~---------------------------- 117 (314)
.+++++|+ +. ||++|..-.|+++++++.|.+ .++.+.-|..|
T Consensus 92 K~vvL~F~~a~----~cp~C~~el~~l~~l~~~~~~-----~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D 162 (254)
T 3tjj_A 92 KYLVFFFYPLD----FTFVCPTEIIAFGDRLEEFRS-----INTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSD 162 (254)
T ss_dssp SEEEEEECSCT----TCSSCCHHHHHHHHTHHHHHT-----TTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEEC
T ss_pred CeEEEEEECCC----CCCchHHHHHHHHHHHHHHHH-----cCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeC
Confidence 45788888 88 999999999999999998863 12333333332
Q ss_pred CCcchHHhCCcc------cCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8429 118 EGSDVFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (314)
Q Consensus 118 ~~~~lf~~~~v~------svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~-i~i~~p~~~~ 182 (314)
...++.+.|++. .+|+.+++.+.|+.......+. ..+.+.+++.+.|++.--.. -.+.-|.||.
T Consensus 163 ~~~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~-~~~~~~~eil~~L~alq~~~~~~~~cp~~W~ 233 (254)
T 3tjj_A 163 LTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDL-PVGRSVDETLRLVQAFQYTDKHGEVAPAGWK 233 (254)
T ss_dssp TTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECT-TCCCCHHHHHHHHHHHHHHHHHC--------
T ss_pred cHHHHHHHcCCccccCCCccceEEEECCCCeEEEEEecCC-CCCCCHHHHHHHHHhhccccccCccccCCCC
Confidence 235678888885 6899999987765420000000 12456777777775432110 1233466664
No 256
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=96.73 E-value=0.0018 Score=50.59 Aligned_cols=62 Identities=11% Similarity=0.243 Sum_probs=44.1
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCc-------chHHhC
Q psy8429 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS-------DVFQML 126 (314)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~-------~lf~~~ 126 (314)
+.+++.+.+. -+++|+.+ ||+.|+..++.+++. ++-|-.+|++..+ .+.+..
T Consensus 8 ~~~~~~i~~~-----~v~vy~~~----~Cp~C~~ak~~L~~~------------~i~~~~~dvd~~~~~~~~~~~l~~~~ 66 (114)
T 3h8q_A 8 RHLVGLIERS-----RVVIFSKS----YCPHSTRVKELFSSL------------GVECNVLELDQVDDGARVQEVLSEIT 66 (114)
T ss_dssp HHHHHHHHHC-----SEEEEECT----TCHHHHHHHHHHHHT------------TCCCEEEETTTSTTHHHHHHHHHHHH
T ss_pred HHHHHHhccC-----CEEEEEcC----CCCcHHHHHHHHHHc------------CCCcEEEEecCCCChHHHHHHHHHHh
Confidence 4567776422 25679999 999999999888753 2446677777522 255777
Q ss_pred CcccCceEEE
Q psy8429 127 RLNTAPIFMH 136 (314)
Q Consensus 127 ~v~svPtl~~ 136 (314)
|..++|++++
T Consensus 67 g~~tvP~vfi 76 (114)
T 3h8q_A 67 NQKTVPNIFV 76 (114)
T ss_dssp SCCSSCEEEE
T ss_pred CCCccCEEEE
Confidence 8999999976
No 257
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=96.72 E-value=0.0004 Score=57.88 Aligned_cols=94 Identities=10% Similarity=0.093 Sum_probs=55.1
Q ss_pred cEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC---------------------CCcchHHh
Q psy8429 68 SAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD---------------------EGSDVFQM 125 (314)
Q Consensus 68 ~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~---------------------~~~~lf~~ 125 (314)
++++.|+ ++ ||++|+.-.|.+++..+.+.+ ..+.+.-+..| .+.++.+.
T Consensus 35 ~vvl~f~~~~----~cp~C~~e~~~l~~~~~~~~~-----~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ 105 (164)
T 4gqc_A 35 PAVLIFFPAA----FSPVCTKELCTFRDKMAQLEK-----ANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKL 105 (164)
T ss_dssp CEEEEECSCT----TCCEECSSCEESCCCGGGGGG-----SSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHH
T ss_pred EEEEEEeCCC----CCCCcccchhhhhhhHHHhhc-----cCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHH
Confidence 4666666 88 999999888888888777753 22333334333 34566777
Q ss_pred CCcc----------cCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 126 LRLN----------TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 126 ~~v~----------svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
||+. ..|+.++..+.|+..-....+...+..+.+++.+.+++..+
T Consensus 106 ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~~ 160 (164)
T 4gqc_A 106 YNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIAG 160 (164)
T ss_dssp TTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHHH
T ss_pred cCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHhc
Confidence 7763 36777777666543100000000122356777777776544
No 258
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=96.69 E-value=0.0016 Score=57.09 Aligned_cols=106 Identities=15% Similarity=0.179 Sum_probs=67.0
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC----------------------------CC
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF----------------------------DE 118 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~----------------------------~~ 118 (314)
+.++++|+|+ ||++|..-.|.+.++.+++.+ .++.+.-+.+ |.
T Consensus 33 ~vvL~f~~a~----~cp~C~~el~~l~~l~~~f~~-----~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~ 103 (220)
T 1xcc_A 33 WAILFSHPND----FTPVCTTELAELGKMHEDFLK-----LNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDE 103 (220)
T ss_dssp EEEEECCSCT----TCHHHHHHHHHHHHTHHHHHT-----TTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECT
T ss_pred eEEEEEECCC----CCCCCHHHHHHHHHHHHHHHH-----cCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECc
Confidence 5566666899 999999999999999988863 1222322222 23
Q ss_pred CcchHHhCCcc------------cCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCCc-ceeeCCCCCc
Q psy8429 119 GSDVFQMLRLN------------TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDIQ-IRVFRPPNYS 182 (314)
Q Consensus 119 ~~~lf~~~~v~------------svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~~-i~i~~p~~~~ 182 (314)
+.++.+.|++. ++|+++++.|.|+......+.. ..+++.+++.+.|++..... -.+..|.||.
T Consensus 104 ~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~-~~g~~~~ell~~i~~lq~~~~~~~~~p~~w~ 179 (220)
T 1xcc_A 104 SRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPA-TTGRNAHEILRVLKSLQLTYTTPVATPVNWN 179 (220)
T ss_dssp TSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECT-TBCCCHHHHHHHHHHHHHHHHSSEEBCTTCC
T ss_pred hhHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCC-CCCCCHHHHHHHHHHHHhhhcCCcccCCCcC
Confidence 45677888873 4799999988765421111111 23567888888887643211 2556677774
No 259
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=96.65 E-value=0.012 Score=50.96 Aligned_cols=41 Identities=7% Similarity=-0.074 Sum_probs=32.5
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD 117 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~ 117 (314)
..++|.|+|+ ||++|. -.|+++++.+.|.. +.+.+.-+.++
T Consensus 39 Kvvll~F~At----~C~~c~-e~p~L~~l~~~~~~-----~g~~vlgvs~d 79 (207)
T 2r37_A 39 KYVLFVNVAS----YGGLTG-QYIELNALQEELAP-----FGLVILGFPCN 79 (207)
T ss_dssp SEEEEEEECS----SSTTTT-HHHHHHHHHHHHGG-----GTEEEEEEECC
T ss_pred CEEEEEEeCC----CCCChH-HHHHHHHHHHHhcc-----CCEEEEEEECc
Confidence 4689999999 999995 57999999999863 34777766644
No 260
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=96.52 E-value=0.0034 Score=53.54 Aligned_cols=44 Identities=14% Similarity=0.228 Sum_probs=37.4
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCc
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS 120 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~ 120 (314)
..+|+.|++. ||++|+.+.|.++++++.+. +++.|..++++-++
T Consensus 25 ~v~vv~f~d~----~Cp~C~~~~~~l~~~~~~~~------~~v~~~~~p~~~~~ 68 (193)
T 3hz8_A 25 KVEVLEFFGY----FCPHCAHLEPVLSKHAKSFK------DDMYLRTEHVVWQK 68 (193)
T ss_dssp SEEEEEEECT----TCHHHHHHHHHHHHHHTTCC------TTEEEEEEECCCSG
T ss_pred CcEEEEEECC----CChhHHHHHHHHHHHHHHCC------CCeEEEEecCCCCc
Confidence 4588999999 99999999999999988764 36999999987543
No 261
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=96.51 E-value=0.00083 Score=54.03 Aligned_cols=64 Identities=16% Similarity=0.242 Sum_probs=43.5
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhh-HHHHHHHHHHhccccCCCCcEEEEEEECCCC-------cchHHh
Q psy8429 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSA-SDEYTIVANSFRYSQMYSNKLFFILVDFDEG-------SDVFQM 125 (314)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~-~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~-------~~lf~~ 125 (314)
+.+++.+... -+++|+.+ ||+.|++. ++.+++... ..+-|-.+|++.. +++.+.
T Consensus 28 ~~v~~~i~~~-----~Vvvy~~~----~Cp~C~~a~k~~L~~~~~---------~~i~~~~vdvd~~~~~~~~~~~L~~~ 89 (129)
T 3ctg_A 28 AHVKDLIGQK-----EVFVAAKT----YCPYCKATLSTLFQELNV---------PKSKALVLELDEMSNGSEIQDALEEI 89 (129)
T ss_dssp HHHHHHHHHS-----SEEEEECT----TCHHHHHHHHHHHTTSCC---------CGGGEEEEEGGGSTTHHHHHHHHHHH
T ss_pred HHHHHHHcCC-----CEEEEECC----CCCchHHHHHHHHHhcCc---------cCCCcEEEEccccCCHHHHHHHHHHH
Confidence 4566665422 26789999 99999999 887764331 1244556666654 357788
Q ss_pred CCcccCceEE
Q psy8429 126 LRLNTAPIFM 135 (314)
Q Consensus 126 ~~v~svPtl~ 135 (314)
+|..++|+++
T Consensus 90 ~g~~tVP~vf 99 (129)
T 3ctg_A 90 SGQKTVPNVY 99 (129)
T ss_dssp HSCCSSCEEE
T ss_pred hCCCCCCEEE
Confidence 9999999974
No 262
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=96.48 E-value=0.0041 Score=51.90 Aligned_cols=30 Identities=7% Similarity=-0.063 Sum_probs=24.7
Q ss_pred cEEEEEe-eCCCCCCCccchh-hHHHHHHHHHHhcc
Q psy8429 68 SAIVMFT-ALAPQRNCHICVS-ASDEYTIVANSFRY 101 (314)
Q Consensus 68 ~vvV~Ft-A~~~~~~C~~C~~-~~pefe~vA~s~~~ 101 (314)
.+++.|+ ++ ||++|+. -.|+++++++.+.+
T Consensus 33 ~vvl~f~~a~----wcp~C~~~e~p~l~~~~~~~~~ 64 (167)
T 2wfc_A 33 KGVLFAVPGA----FTPGSSKTHLPGYVEQAAAIHG 64 (167)
T ss_dssp EEEEEEESCT----TCHHHHHTHHHHHHHTHHHHHH
T ss_pred cEEEEEeCCC----CCCCCCHHHHHHHHHHHHHHHH
Confidence 3666665 88 9999999 99999999888863
No 263
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.42 E-value=0.025 Score=47.96 Aligned_cols=109 Identities=7% Similarity=0.088 Sum_probs=74.7
Q ss_pred EEeChhhHHHHHHcC-----CCCccEEEEEeeCCCCCCCccchhhHHHH---HHHHHHhccccCCCCcEEEEEEECCCCc
Q psy8429 49 LRFDGQKYKEYIKNG-----PRNYSAIVMFTALAPQRNCHICVSASDEY---TIVANSFRYSQMYSNKLFFILVDFDEGS 120 (314)
Q Consensus 49 I~Lt~~nf~~~v~~~-----~r~y~vvV~FtA~~~~~~C~~C~~~~pef---e~vA~s~~~~~~~~~~v~F~~vD~~~~~ 120 (314)
...-..+|++-+... .+...++|+++++ ||..|..|..+. +.|.+-.. .+..+...|+++..
T Consensus 33 p~F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~----~~~~~~~f~~~~L~~~~V~~~l~------~nfV~w~~dv~~~e 102 (178)
T 2ec4_A 33 PVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHD----ESVLTNVFCSQMLCAESIVSYLS------QNFITWAWDLTKDS 102 (178)
T ss_dssp CCCCCSCHHHHHHTTTSSCTTTCCEEEEEEECS----SCSHHHHHHHHTTTCHHHHHHHH------HTEEEEEEECCSHH
T ss_pred CCeeeCCHHHHHHHHHhhhhhhCcEEEEEEeCC----CCccHHHHHHHhcCCHHHHHHHH------cCEEEEEEeCCCch
Confidence 344567788887543 4567889999999 999999887443 34554443 35888899998753
Q ss_pred ---------------chH---HhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 121 ---------------DVF---QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 121 ---------------~lf---~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
++. +.++++++|++.+..+.+. .-+......|..+++++.+.+.+..
T Consensus 103 ~~~~~~~~~~~~~g~~~a~~~~~~~~~~~P~l~ii~~~~~--~~~vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 103 NRARFLTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGKRS--SNEVLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHSCSTTCSEEEEECCCSS--CCCEEEEECSCCCHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhHHHHHHHHhhcCCCCCCeEEEEEcCCC--ceEEEEEEeCCCCHHHHHHHHHHHH
Confidence 333 3389999999999976521 1122333457788888888876543
No 264
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=96.41 E-value=0.0044 Score=51.07 Aligned_cols=93 Identities=11% Similarity=0.050 Sum_probs=52.6
Q ss_pred cEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccc-----cCC----------CCcE-EEEEEECCC-CcchHHhCCcc
Q psy8429 68 SAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYS-----QMY----------SNKL-FFILVDFDE-GSDVFQMLRLN 129 (314)
Q Consensus 68 ~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~-----~~~----------~~~v-~F~~vD~~~-~~~lf~~~~v~ 129 (314)
++++.|+ +. ||++|+.-.|+++++.+. ..- ..+ ..++ .|-.+. |. +.++.+.|++.
T Consensus 48 ~vvl~f~~~~----~c~~C~~~~~~l~~~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~-D~~~~~~~~~~gv~ 121 (166)
T 3p7x_A 48 KKLISVVPSI----DTGVCDQQTRKFNSDASK-EEGIVLTISADLPFAQKRWCASAGLDNVITLS-DHRDLSFGENYGVV 121 (166)
T ss_dssp CEEEEECSCT----TSHHHHHHHHHHHHHSCT-TTSEEEEEESSCHHHHHHHHHHHTCSSCEEEE-CTTTCHHHHHHTCE
T ss_pred cEEEEEECCC----CCCccHHHHHHHHHHhhc-CCCEEEEEECCCHHHHHHHHHHcCCCceEEcc-CCchhHHHHHhCCc
Confidence 4777777 77 999999999999888765 210 000 0011 121111 33 45777778887
Q ss_pred c------CceEEEecCCCCCCCCCccce-eecccCHHHHHHHHHh
Q psy8429 130 T------APIFMHFPAKGKPKPSDTLDI-QRVGYSAEAIVKWIAD 167 (314)
Q Consensus 130 s------vPtl~~f~p~~~~~~~~~~~~-~~~~~~a~~l~~fI~~ 167 (314)
. .|+.+++.+.|+.... .+.. .....+.+++.+.|++
T Consensus 122 ~~~~g~~~p~~~liD~~G~i~~~-~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 122 MEELRLLARAVFVLDADNKVVYK-EIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp ETTTTEECCEEEEECTTCBEEEE-EECSBTTSCCCHHHHHHHHHT
T ss_pred cccCCceeeEEEEECCCCeEEEE-EEcCCcccCCCHHHHHHHHhc
Confidence 5 8888888776554200 0000 0122356778777764
No 265
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.40 E-value=0.0052 Score=53.95 Aligned_cols=90 Identities=16% Similarity=0.217 Sum_probs=55.2
Q ss_pred cEEEEEe-eCCCCCCCccch-hhHHHHHHHHHHhccccCCCCcE-EEEEEECC----------------------CCcch
Q psy8429 68 SAIVMFT-ALAPQRNCHICV-SASDEYTIVANSFRYSQMYSNKL-FFILVDFD----------------------EGSDV 122 (314)
Q Consensus 68 ~vvV~Ft-A~~~~~~C~~C~-~~~pefe~vA~s~~~~~~~~~~v-~F~~vD~~----------------------~~~~l 122 (314)
.+++.|+ |+ ||++|+ .-.|.++++++.+.+ .++ .+.-+..| .+.++
T Consensus 35 ~vvl~f~~a~----~cp~C~~~e~~~l~~~~~~~~~-----~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~ 105 (241)
T 1nm3_A 35 TVIVFSLPGA----FTPTCSSSHLPRYNELAPVFKK-----YGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEF 105 (241)
T ss_dssp EEEEEEESCS----SCHHHHHTHHHHHHHHHHHHHH-----TTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHH
T ss_pred eEEEEEeCCC----CCCCCCHHHHHHHHHHHHHHHH-----CCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHH
Confidence 5778887 88 999999 899999999988863 123 33333332 23456
Q ss_pred HHhCCcc-----------cCceEEEecCCCCCCCCCccceeecc-----cCHHHHHHHHHhh
Q psy8429 123 FQMLRLN-----------TAPIFMHFPAKGKPKPSDTLDIQRVG-----YSAEAIVKWIADR 168 (314)
Q Consensus 123 f~~~~v~-----------svPtl~~f~p~~~~~~~~~~~~~~~~-----~~a~~l~~fI~~~ 168 (314)
.+.||+. +.|+.+++ +.|+... ........+ .+++++.+.+.+.
T Consensus 106 ~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~i~~-~~~~~~~~~~~~~~~~~~~il~~l~~~ 165 (241)
T 1nm3_A 106 TEGMGMLVGKEDLGFGKRSWRYSMLV-KNGVVEK-MFIEPNEPGDPFKVSDADTMLKYLAPQ 165 (241)
T ss_dssp HHHTTCEEECTTTTCCEEECCEEEEE-ETTEEEE-EEECCSCSSCCCSSSSHHHHHHHHCTT
T ss_pred HHHhCceeecccccCcccceeEEEEE-ECCEEEE-EEEeccCCCccceecCHHHHHHHhhhh
Confidence 7777775 45777777 5444310 000000111 4678888888754
No 266
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=96.40 E-value=0.004 Score=51.28 Aligned_cols=30 Identities=10% Similarity=0.109 Sum_probs=25.8
Q ss_pred cEEEEEe-eCCCCCCCccch-hhHHHHHHHHHHhcc
Q psy8429 68 SAIVMFT-ALAPQRNCHICV-SASDEYTIVANSFRY 101 (314)
Q Consensus 68 ~vvV~Ft-A~~~~~~C~~C~-~~~pefe~vA~s~~~ 101 (314)
.+++.|+ ++ ||++|. .-.|+++++.+.+.+
T Consensus 37 ~vvl~f~~~~----~c~~C~~~e~~~l~~~~~~~~~ 68 (162)
T 1tp9_A 37 KVILFGVPGA----FTPTCSLKHVPGFIEKAGELKS 68 (162)
T ss_dssp EEEEEEESCT----TCHHHHHTHHHHHHHHHHHHHH
T ss_pred cEEEEEeCCC----CCCCCCHHHHHHHHHHHHHHHH
Confidence 4788888 78 999999 889999999988863
No 267
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=96.33 E-value=0.0053 Score=50.54 Aligned_cols=28 Identities=7% Similarity=0.343 Sum_probs=24.9
Q ss_pred cEEEEEe-eCCCCCCCccchhhHHHHHHHHHHh
Q psy8429 68 SAIVMFT-ALAPQRNCHICVSASDEYTIVANSF 99 (314)
Q Consensus 68 ~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~ 99 (314)
.+++.|+ ++ ||++|+.-.|.++++.+.+
T Consensus 45 ~vvl~f~~~~----~c~~C~~e~~~l~~~~~~~ 73 (165)
T 1q98_A 45 RKVLNIFPSI----DTGVCATSVRKFNQQAAKL 73 (165)
T ss_dssp EEEEEECSCS----CSSCCCHHHHHHHHHHHHS
T ss_pred eEEEEEECCC----CCCccHHHHHHHHHHHHHc
Confidence 5788887 78 9999999999999998887
No 268
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=96.33 E-value=0.0029 Score=52.97 Aligned_cols=57 Identities=12% Similarity=0.153 Sum_probs=42.5
Q ss_pred ccEEEEEeeCCCCCCCccchhh-HHHHHHHHHHhccccCCCCcEE-EEEEECCC---CcchHHhCCcc-cCc
Q psy8429 67 YSAIVMFTALAPQRNCHICVSA-SDEYTIVANSFRYSQMYSNKLF-FILVDFDE---GSDVFQMLRLN-TAP 132 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~-~pefe~vA~s~~~~~~~~~~v~-F~~vD~~~---~~~lf~~~~v~-svP 132 (314)
+.+++.|+++ ||++|+.- .|+++++.+.+.+ .++. +.-|..++ .++..++++++ ++|
T Consensus 45 ~vvl~~~~a~----wcp~C~~eh~p~l~~~~~~~~~-----~g~~~vv~Is~d~~~~~~~~~~~~~~~~~fp 107 (171)
T 2pwj_A 45 KVVIFGLPGA----YTGVCSSKHVPPYKHNIDKFKA-----KGVDSVICVAINDPYTVNAWAEKIQAKDAIE 107 (171)
T ss_dssp EEEEEECSCT----TCTTHHHHTHHHHHHTHHHHHH-----TTCSEEEEEESSCHHHHHHHHHHTTCTTTSE
T ss_pred CEEEEEecCC----CCCCCCHHHHHHHHHHHHHHHH-----CCCCEEEEEeCCCHHHHHHHHHHhCCCCceE
Confidence 4577889999 99999997 9999999988863 2355 66666665 34556777774 666
No 269
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=96.32 E-value=0.0097 Score=51.00 Aligned_cols=72 Identities=13% Similarity=0.188 Sum_probs=45.2
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhcc--------c-------cCCCCcE-EEEEEECCC-CcchHHhCCc
Q psy8429 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRY--------S-------QMYSNKL-FFILVDFDE-GSDVFQMLRL 128 (314)
Q Consensus 67 y~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~--------~-------~~~~~~v-~F~~vD~~~-~~~lf~~~~v 128 (314)
..+++.|+ +. ||++|+.-.|+++++.+.+.. + .....++ -|-.+ .|. +.++.+.|++
T Consensus 79 k~vvl~F~~~~----~c~~C~~e~~~l~~l~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l-~D~~~~~~~~~ygv 153 (200)
T 3zrd_A 79 KRKVLNIFPSI----DTGVCAASVRKFNQLAGELENTVVLCISSDLPFAQSRFCGAEGLSNVITL-STLRGADFKQAYGV 153 (200)
T ss_dssp SEEEEEECSCC----CCSCCCHHHHHHHHHHHTSTTEEEEEEESSCHHHHTTCTTTTTCTTEEEE-ETTSCTHHHHHTTC
T ss_pred CcEEEEEECCC----CCchhHHHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHcCCCCceEE-ecCchHHHHHHhCc
Confidence 35778887 67 999999999999999988721 0 0001122 22211 123 4566777777
Q ss_pred c---------cCceEEEecCCCCC
Q psy8429 129 N---------TAPIFMHFPAKGKP 143 (314)
Q Consensus 129 ~---------svPtl~~f~p~~~~ 143 (314)
. ..|+.+++.+.|+.
T Consensus 154 ~~~~~~~~g~~~p~~~lID~~G~I 177 (200)
T 3zrd_A 154 AITEGPLAGLTARAVVVLDGQDNV 177 (200)
T ss_dssp EECSSTTTTSBCCEEEEECTTSBE
T ss_pred eeecccCCCccccEEEEECCCCeE
Confidence 5 35888888665543
No 270
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=96.31 E-value=0.024 Score=47.10 Aligned_cols=44 Identities=14% Similarity=0.265 Sum_probs=33.7
Q ss_pred ccEEEEEeeCCCCCCCc-cchhhHHHHHHHHHHhccccCCCCcEEEEEEECC
Q psy8429 67 YSAIVMFTALAPQRNCH-ICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD 117 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~-~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~ 117 (314)
..+++.|+++ ||+ +|....+++.++.+.+.+. ..++.+.-+.+|
T Consensus 33 k~vll~F~~t----~Cp~~Cp~~~~~l~~l~~~~~~~---~~~v~~v~isvD 77 (170)
T 4hde_A 33 KVWVADFMFT----NCQTVCPPMTANMAKLQKMAKEE---KLDVQFVSFSVD 77 (170)
T ss_dssp SCEEEEEECT----TCSSSHHHHHHHHHHHHHHHHHT---TCCCEEEEEESC
T ss_pred CEEEEEEECC----CCCCcccHHHHHHHHHHHhhhcc---cccceeEeeecC
Confidence 4689999999 996 7999999999998887642 234666666655
No 271
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=96.28 E-value=0.0052 Score=50.78 Aligned_cols=29 Identities=7% Similarity=0.395 Sum_probs=25.1
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHh
Q psy8429 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSF 99 (314)
Q Consensus 67 y~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~ 99 (314)
.++++.|+ ++ ||++|+.-.|+++++.+.+
T Consensus 48 k~vvl~f~~~~----~C~~C~~~~~~l~~~~~~~ 77 (171)
T 2yzh_A 48 VVQVIITVPSL----DTPVCETETKKFNEIMAGM 77 (171)
T ss_dssp SEEEEEECSCT----TSHHHHHHHHHHHHHTTTC
T ss_pred CeEEEEEECCC----CCCchHHHHHHHHHHHHHc
Confidence 45788887 78 9999999999999988776
No 272
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=96.18 E-value=0.026 Score=49.38 Aligned_cols=101 Identities=8% Similarity=0.058 Sum_probs=64.8
Q ss_pred EEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCCc
Q psy8429 49 LRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLRL 128 (314)
Q Consensus 49 I~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~v 128 (314)
-.+++++++.++....++ ++.++|+.. .|..+++ ++..+.. .+.+.+..++ +.+++++++|+|
T Consensus 141 ~~~~~~~l~~~~~~~~~~-~~al~f~~~----~~~~~~~-------~~~d~~~----~~~i~v~~~~-~~~~~l~~~f~v 203 (244)
T 3q6o_A 141 EPAXLEEIDGFFARNNEE-YLALIFEXG----GSYLARE-------VALDLSQ----HKGVAVRRVL-NTEANVVRKFGV 203 (244)
T ss_dssp SCCCHHHHHTHHHHCCCS-EEEEEEECT----TCCHHHH-------HHHHTTT----CTTEEEEEEE-TTCHHHHHHHTC
T ss_pred ccccHHHHHHHhhcCCCc-eEEEEEEEC----CcchHHH-------HHHHhcc----CCceEEEEEe-CchHHHHHHcCC
Confidence 456778888887544444 466778876 5543333 3333331 2457776666 446899999999
Q ss_pred ccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCC
Q psy8429 129 NTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (314)
Q Consensus 129 ~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~ 171 (314)
+++|++++|.++|+.. ..+....+.+.+..++++..|+
T Consensus 204 ~~~Pslvl~~~~g~~~-----~~~~~~~~r~~~~~~l~~~~~~ 241 (244)
T 3q6o_A 204 TDFPSCYLLFRNGSVS-----RVPVLMESRSFYTAYLQRLSGL 241 (244)
T ss_dssp CCSSEEEEEETTSCEE-----ECCCSSSSHHHHHHHHHTC---
T ss_pred CCCCeEEEEeCCCCeE-----eeccccccHHHHHHHHHhCCCC
Confidence 9999999999876531 1223345678888888887774
No 273
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=96.15 E-value=0.0056 Score=50.26 Aligned_cols=29 Identities=7% Similarity=0.276 Sum_probs=24.9
Q ss_pred ccEEEEEee-CCCCCCCccchhhHHHHHHHHHHh
Q psy8429 67 YSAIVMFTA-LAPQRNCHICVSASDEYTIVANSF 99 (314)
Q Consensus 67 y~vvV~FtA-~~~~~~C~~C~~~~pefe~vA~s~ 99 (314)
..+++.|++ + ||++|+.-.|+++++.+.+
T Consensus 43 k~vvl~F~~~~----~c~~C~~~~~~l~~~~~~~ 72 (163)
T 1psq_A 43 KKKVLSVVPSI----DTGICSTQTRRFNEELAGL 72 (163)
T ss_dssp SEEEEEECSCT----TSHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEEECCC----CCCccHHHHHHHHHHHHHc
Confidence 358889985 8 9999999999999988776
No 274
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=95.95 E-value=0.0027 Score=54.02 Aligned_cols=42 Identities=14% Similarity=0.227 Sum_probs=34.0
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHH---HHHHHHhccccCCCCcEEEEEEECCC
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEY---TIVANSFRYSQMYSNKLFFILVDFDE 118 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pef---e~vA~s~~~~~~~~~~v~F~~vD~~~ 118 (314)
-+++|.|++. ||++|+.+.|.+ +++++.+. +++.|...|+.-
T Consensus 15 ~~~vvef~d~----~Cp~C~~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~ 59 (189)
T 3l9v_A 15 APAVVEFFSF----YCPPCYAFSQTMGVDQAIRHVLP------QGSRMVKYHVSL 59 (189)
T ss_dssp CCSEEEEECT----TCHHHHHHHHTSCHHHHHHTTCC------TTCCEEEEECSS
T ss_pred CCEEEEEECC----CChhHHHHhHhccchHHHHHhCC------CCCEEEEEechh
Confidence 3578999998 999999999987 67776653 468888888876
No 275
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=95.87 E-value=0.0074 Score=51.31 Aligned_cols=43 Identities=7% Similarity=0.043 Sum_probs=31.1
Q ss_pred ccEEEEEeeCCCCCCCccchh-hHHHHHHHHHHhccccCCCCcEE-EEEEECCC
Q psy8429 67 YSAIVMFTALAPQRNCHICVS-ASDEYTIVANSFRYSQMYSNKLF-FILVDFDE 118 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~-~~pefe~vA~s~~~~~~~~~~v~-F~~vD~~~ 118 (314)
+.++++|+++ ||++|+. -.|.|+++++.+.+ ..+. +.-+..++
T Consensus 58 ~vvL~f~~a~----wcp~C~~~e~p~l~~~~~~~~~-----~gv~~vv~Is~d~ 102 (184)
T 3uma_A 58 RVVLFAVPGA----FTPTCSLNHLPGYLENRDAILA-----RGVDDIAVVAVND 102 (184)
T ss_dssp EEEEEEESCT----TCHHHHHTHHHHHHHTHHHHHT-----TTCCEEEEEESSC
T ss_pred CEEEEEEcCC----CCCCcCHHHHHHHHHHHHHHHH-----cCCCEEEEEECCC
Confidence 4566677799 9999999 69999999998863 2244 44555444
No 276
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=95.39 E-value=0.017 Score=48.56 Aligned_cols=57 Identities=4% Similarity=0.039 Sum_probs=35.6
Q ss_pred ccEEEEEeeCCCCCCCccch-hhHHHHHHHHHHhccccCCCCcEEEE-EEECCC---CcchHHhCCcc-cCc
Q psy8429 67 YSAIVMFTALAPQRNCHICV-SASDEYTIVANSFRYSQMYSNKLFFI-LVDFDE---GSDVFQMLRLN-TAP 132 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~-~~~pefe~vA~s~~~~~~~~~~v~F~-~vD~~~---~~~lf~~~~v~-svP 132 (314)
+.++++|+++ ||++|+ +-.|.|++.++.+.+ ..+.+. -+..|+ .++..++.+++ .+|
T Consensus 45 ~vvL~f~pa~----wcp~C~~~e~p~l~~~~~~~~~-----~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp 107 (173)
T 3mng_A 45 KGVLFGVPGA----FTPGCSKTHLPGFVEQAEALKA-----KGVQVVACLSVNDAFVTGEWGRAHKAEGKVR 107 (173)
T ss_dssp EEEEEECSCT----TCHHHHHTHHHHHHHTHHHHHT-----TTCCEEEEEESSCHHHHHHHHHHTTCTTTCE
T ss_pred cEEEEEEeCC----CCCCCCHHHHHHHHHHHHHHHh-----CCCEEEEEEcCCCHHHHHHHHHHhCCCCceE
Confidence 3445555699 999999 588999999998863 223333 244444 23445555554 344
No 277
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=94.90 E-value=0.094 Score=51.74 Aligned_cols=102 Identities=9% Similarity=0.029 Sum_probs=65.5
Q ss_pred eEEeChhhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHHhCC
Q psy8429 48 VLRFDGQKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQMLR 127 (314)
Q Consensus 48 VI~Lt~~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~~~~ 127 (314)
+..++++++++++.+.+++ +++++|+..+ .+..+.++..+.. ...+.+..++ +.+.+++++||
T Consensus 140 l~~it~~~l~~~l~~~~~~-~vallF~~~~-----------s~~~~~~~ldl~~----~~~v~v~~v~-~~~~~l~~kfg 202 (519)
T 3t58_A 140 LEPAKLNDIDGFFTRNKAD-YLALVFERED-----------SYLGREVTLDLSQ----YHAVAVRRVL-NTESDLVNKFG 202 (519)
T ss_dssp CSBCCHHHHTTGGGSCCCS-EEEEEEECTT-----------CCHHHHHHHHTTT----CTTEEEEEEE-TTCHHHHHHHT
T ss_pred cCcCCHHHHHHHhccCCCC-eEEEEecCCc-----------hHHHHHHHHHhhc----cCCeeEEEec-CchHHHHHHcC
Confidence 4567888888887544444 4677788752 1244566666642 2457776654 45689999999
Q ss_pred cccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCC
Q psy8429 128 LNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (314)
Q Consensus 128 v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~ 171 (314)
|+++|+++++.++|+.. ..+......+.+..++++..++
T Consensus 203 V~~~Pslvl~~~nGk~~-----~~~v~~~~r~~~~~~l~~l~~~ 241 (519)
T 3t58_A 203 VTDFPSCYLLLRNGSVS-----RVPVLVESRSFYTSYLRGLPGL 241 (519)
T ss_dssp CCCSSEEEEEETTSCEE-----ECCCSSCSHHHHHHHHTTSTTC
T ss_pred CCCCCeEEEEeCCCcee-----ecccccccHHHHHHHHHHccCC
Confidence 99999999999876531 1111222345566777765554
No 278
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=94.77 E-value=0.04 Score=44.08 Aligned_cols=65 Identities=12% Similarity=0.271 Sum_probs=41.9
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC---c---c-hHHhC
Q psy8429 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG---S---D-VFQML 126 (314)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~---~---~-lf~~~ 126 (314)
++|++++. .+ -+++|+.+ ||+.|++.+..+++.. .+ .+-|-.+|++.. + + +.+..
T Consensus 5 ~~~~~ii~-~~----~Vvvysk~----~Cp~C~~ak~lL~~~~-~~--------~v~~~~idid~~~d~~~~~~~l~~~~ 66 (127)
T 3l4n_A 5 KEYSLILD-LS----PIIIFSKS----TCSYSKGMKELLENEY-QF--------IPNYYIIELDKHGHGEELQEYIKLVT 66 (127)
T ss_dssp HHHHHHHT-SC----SEEEEECT----TCHHHHHHHHHHHHHE-EE--------ESCCEEEEGGGSTTHHHHHHHHHHHH
T ss_pred HHHHHHHc-cC----CEEEEEcC----CCccHHHHHHHHHHhc-cc--------CCCcEEEEecCCCCHHHHHHHHHHHc
Confidence 56888763 32 16789999 9999999998877631 01 123455555542 2 2 23345
Q ss_pred CcccCceEEE
Q psy8429 127 RLNTAPIFMH 136 (314)
Q Consensus 127 ~v~svPtl~~ 136 (314)
|-.++|.+++
T Consensus 67 G~~tVP~IfI 76 (127)
T 3l4n_A 67 GRGTVPNLLV 76 (127)
T ss_dssp SCCSSCEEEE
T ss_pred CCCCcceEEE
Confidence 8899999975
No 279
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=94.38 E-value=0.063 Score=39.22 Aligned_cols=55 Identities=16% Similarity=0.255 Sum_probs=39.2
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC-----CCc----chHHhCCcc-----cCceEE
Q psy8429 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD-----EGS----DVFQMLRLN-----TAPIFM 135 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~-----~~~----~lf~~~~v~-----svPtl~ 135 (314)
+++|+.+...+||+.|+..+..+++ .++-|-.+|++ +++ ++.+..+-. ++|.++
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~------------~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~ 69 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTV------------KKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVF 69 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHH------------TTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEE
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHH------------cCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEE
Confidence 4556666567799999998877664 13557778887 543 356677888 999987
Q ss_pred E
Q psy8429 136 H 136 (314)
Q Consensus 136 ~ 136 (314)
+
T Consensus 70 i 70 (87)
T 1aba_A 70 A 70 (87)
T ss_dssp C
T ss_pred E
Confidence 4
No 280
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.24 E-value=0.077 Score=41.02 Aligned_cols=51 Identities=18% Similarity=0.229 Sum_probs=35.9
Q ss_pred EEEEeeCCCCCCCccch------hhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcc----hHHhC--------CcccC
Q psy8429 70 IVMFTALAPQRNCHICV------SASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD----VFQML--------RLNTA 131 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C~------~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~----lf~~~--------~v~sv 131 (314)
+++|+.+ +|+.|+ +.+..++. .++-|-.+|++++++ +.+.+ +..++
T Consensus 10 V~vy~~~----~C~~C~~~~~~~~ak~~L~~------------~gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tv 73 (111)
T 2ct6_A 10 IRVFIAS----SSGFVAIKKKQQDVVRFLEA------------NKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLP 73 (111)
T ss_dssp EEEEECS----SCSCHHHHHHHHHHHHHHHH------------TTCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCS
T ss_pred EEEEEcC----CCCCcccchhHHHHHHHHHH------------cCCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCC
Confidence 5678888 999999 45544432 246788999998754 33443 77789
Q ss_pred ceEEE
Q psy8429 132 PIFMH 136 (314)
Q Consensus 132 Ptl~~ 136 (314)
|.+++
T Consensus 74 P~vfi 78 (111)
T 2ct6_A 74 PQIFN 78 (111)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 98864
No 281
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=94.18 E-value=0.032 Score=45.13 Aligned_cols=67 Identities=15% Similarity=0.193 Sum_probs=41.8
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH----hCCcc
Q psy8429 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ----MLRLN 129 (314)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~----~~~v~ 129 (314)
+..++.+... .++++.+++....||+.|+..+..+++. .+-|-.+|++++++..+ ..+..
T Consensus 26 ~~v~~~i~~~----~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~------------gv~y~~vdI~~d~~~~~~L~~~~G~~ 89 (135)
T 2wci_A 26 EKIQRQIAEN----PILLYMKGSPKLPSCGFSAQAVQALAAC------------GERFAYVDILQNPDIRAELPKYANWP 89 (135)
T ss_dssp HHHHHHHHHC----SEEEEESBCSSSBSSHHHHHHHHHHHTT------------CSCCEEEEGGGCHHHHHHHHHHHTCC
T ss_pred HHHHHHhccC----CEEEEEEecCCCCCCccHHHHHHHHHHc------------CCceEEEECCCCHHHHHHHHHHHCCC
Confidence 3455555322 3555444421122999999988876532 35578889988765544 35788
Q ss_pred cCceEEE
Q psy8429 130 TAPIFMH 136 (314)
Q Consensus 130 svPtl~~ 136 (314)
++|.+++
T Consensus 90 tvP~VfI 96 (135)
T 2wci_A 90 TFPQLWV 96 (135)
T ss_dssp SSCEEEE
T ss_pred CcCEEEE
Confidence 9998764
No 282
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=94.15 E-value=0.4 Score=43.29 Aligned_cols=79 Identities=14% Similarity=0.171 Sum_probs=53.3
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC------------------CcchHHhCC
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE------------------GSDVFQMLR 127 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~------------------~~~lf~~~~ 127 (314)
+-..|.+||.+ +|+.|...+.-+++.+..+. +.-...++++ .++..+++|
T Consensus 42 ~~~~VelyTs~----gCp~C~~Ak~lL~~~~~~~~--------vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G 109 (270)
T 2axo_A 42 VKGVVELFTSQ----GCASCPPADEALRKMIQKGD--------VVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALG 109 (270)
T ss_dssp CCCEEEEEECT----TCTTCHHHHHHHHHHHHHTS--------SEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTT
T ss_pred CCcEEEEEeCC----CCCChHHHHHHHHHhhccCC--------eeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhC
Confidence 33578899999 99999999999999887642 3211222221 234677899
Q ss_pred cccC--ceEEEecCCCCCCCCCccceeecccCHHHHHHHHHh
Q psy8429 128 LNTA--PIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIAD 167 (314)
Q Consensus 128 v~sv--Ptl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~ 167 (314)
.+++ |.+++ ++ +. . .++.+.+++.+-|.+
T Consensus 110 ~~tVyTPqI~I--ng-~~------~--v~G~d~~~l~~~l~~ 140 (270)
T 2axo_A 110 RNGVYTPQAIL--NG-RD------H--VKGADVRGIYDRLDA 140 (270)
T ss_dssp CSCCCSSEEEE--TT-TE------E--EETTCHHHHHHHHHH
T ss_pred CCcccCCEEEE--CC-EE------e--ecCCCHHHHHHHHHH
Confidence 9999 99886 22 21 1 356677788877764
No 283
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=94.06 E-value=0.047 Score=42.38 Aligned_cols=55 Identities=18% Similarity=0.196 Sum_probs=37.5
Q ss_pred EEEEeeCCCC-CCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH----hCCcccCceEEE
Q psy8429 70 IVMFTALAPQ-RNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ----MLRLNTAPIFMH 136 (314)
Q Consensus 70 vV~FtA~~~~-~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~----~~~v~svPtl~~ 136 (314)
+|+|+...|+ .||+.|+..+..+++. ++-|-.+|++++++..+ ..|-.++|.+++
T Consensus 18 Vvlf~kg~~~~~~Cp~C~~ak~~L~~~------------gi~y~~~di~~d~~~~~~l~~~~g~~tvP~ifi 77 (111)
T 3zyw_A 18 CMLFMKGTPQEPRCGFSKQMVEILHKH------------NIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLYV 77 (111)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHHT------------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEEE
T ss_pred EEEEEecCCCCCcchhHHHHHHHHHHc------------CCCeEEEECcCCHHHHHHHHHHHCCCCCCEEEE
Confidence 4567761222 3999999998877631 25577789988765533 347889999865
No 284
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=94.03 E-value=0.086 Score=39.11 Aligned_cols=51 Identities=10% Similarity=0.182 Sum_probs=36.2
Q ss_pred EEEEeeCCCCCCCccc------hhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCc----chHHhCC--cccCceEEE
Q psy8429 70 IVMFTALAPQRNCHIC------VSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS----DVFQMLR--LNTAPIFMH 136 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C------~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~----~lf~~~~--v~svPtl~~ 136 (314)
+++|+.+ +|+.| +..+..++. .++-|-.+|+++++ ++.+..| ..++|.+++
T Consensus 4 v~ly~~~----~C~~c~~~~~~~~ak~~L~~------------~~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi 66 (93)
T 1t1v_A 4 LRVYSTS----VTGSREIKSQQSEVTRILDG------------KRIQYQLVDISQDNALRDEMRTLAGNPKATPPQIVN 66 (93)
T ss_dssp EEEEECS----SCSCHHHHHHHHHHHHHHHH------------TTCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEEE
T ss_pred EEEEEcC----CCCCchhhHHHHHHHHHHHH------------CCCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEEE
Confidence 5778888 99999 555544431 24678899998864 3445678 779999864
No 285
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=93.87 E-value=0.025 Score=47.82 Aligned_cols=40 Identities=10% Similarity=0.113 Sum_probs=32.0
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE 118 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~ 118 (314)
..+||.|++. ||++|+.+.|.++++.+.+ . +.|.++++.-
T Consensus 23 ~~~vvef~d~----~Cp~C~~~~~~~~~~~~~~-~-------v~~~~~p~~~ 62 (185)
T 3feu_A 23 MAPVTEVFAL----SCGHCRNMENFLPVISQEA-G-------TDIGKMHITF 62 (185)
T ss_dssp CCSEEEEECT----TCHHHHHHGGGHHHHHHHH-T-------SCCEEEECCS
T ss_pred CCEEEEEECC----CChhHHHhhHHHHHHHHHh-C-------CeEEEEeccC
Confidence 4578999998 9999999999999999876 1 4556666553
No 286
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=93.73 E-value=0.11 Score=43.27 Aligned_cols=43 Identities=14% Similarity=0.138 Sum_probs=34.0
Q ss_pred CccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCC
Q psy8429 66 NYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDE 118 (314)
Q Consensus 66 ~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~ 118 (314)
....++.|+.. +|++|..+.|.++++.+.+. +++.|..+.+.-
T Consensus 25 a~v~i~~f~d~----~Cp~C~~~~~~l~~l~~~~~------~~v~~~~~p~~~ 67 (193)
T 2rem_A 25 GKIEVVEIFGY----TCPHCAHFDSKLQAWGARQA------KDVRFTLVPAVF 67 (193)
T ss_dssp TCEEEEEEECT----TCHHHHHHHHHHHHHHHTSC------TTEEEEEEECCC
T ss_pred CCeEEEEEECC----CChhHhhhhHHHHHHHHhcC------CceEEEEeCccc
Confidence 34478889998 99999999999999888764 467777776643
No 287
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=93.39 E-value=0.07 Score=41.08 Aligned_cols=55 Identities=16% Similarity=0.132 Sum_probs=37.3
Q ss_pred EEEEeeCCCC-CCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchHH----hCCcccCceEEE
Q psy8429 70 IVMFTALAPQ-RNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVFQ----MLRLNTAPIFMH 136 (314)
Q Consensus 70 vV~FtA~~~~-~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf~----~~~v~svPtl~~ 136 (314)
+++|+...|. .||+.|+..+..+++. ++-|-.+|++++++..+ ..+-.++|.+++
T Consensus 20 Vvvy~k~t~~~p~Cp~C~~ak~~L~~~------------gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~ifi 79 (109)
T 3ipz_A 20 VVLFMKGTRDFPMCGFSNTVVQILKNL------------NVPFEDVNILENEMLRQGLKEYSNWPTFPQLYI 79 (109)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHHT------------TCCCEEEEGGGCHHHHHHHHHHHTCSSSCEEEE
T ss_pred EEEEEecCCCCCCChhHHHHHHHHHHc------------CCCcEEEECCCCHHHHHHHHHHHCCCCCCeEEE
Confidence 4456653333 2999999998877642 25577788887765443 347889998764
No 288
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=93.32 E-value=0.15 Score=44.42 Aligned_cols=53 Identities=21% Similarity=0.260 Sum_probs=40.7
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcc---hHHhCCcccCceEEE
Q psy8429 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSD---VFQMLRLNTAPIFMH 136 (314)
Q Consensus 68 ~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~---lf~~~~v~svPtl~~ 136 (314)
..+++|+.+ ||+.|+..+..+++. ++-|-.+|++++++ +.+.++..++|.+++
T Consensus 170 ~~i~ly~~~----~Cp~C~~a~~~L~~~------------~i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~~ 225 (241)
T 1nm3_A 170 ESISIFTKP----GCPFCAKAKQLLHDK------------GLSFEEIILGHDATIVSVRAVSGRTTVPQVFI 225 (241)
T ss_dssp CCEEEEECS----SCHHHHHHHHHHHHH------------TCCCEEEETTTTCCHHHHHHHTCCSSSCEEEE
T ss_pred ceEEEEECC----CChHHHHHHHHHHHc------------CCceEEEECCCchHHHHHHHHhCCCCcCEEEE
Confidence 347788998 999999998877742 24456678877544 777899999999864
No 289
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=92.77 E-value=0.12 Score=40.60 Aligned_cols=55 Identities=15% Similarity=0.183 Sum_probs=37.4
Q ss_pred EEEEeeCCC-CCCCccchhhHHHHHHHHHHhccccCCCCcE-EEEEEECCCCcchHHh----CCcccCceEEE
Q psy8429 70 IVMFTALAP-QRNCHICVSASDEYTIVANSFRYSQMYSNKL-FFILVDFDEGSDVFQM----LRLNTAPIFMH 136 (314)
Q Consensus 70 vV~FtA~~~-~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v-~F~~vD~~~~~~lf~~----~~v~svPtl~~ 136 (314)
+++|+...| ..||+.|+..+..+++. .+ -|-.+|++++++..+. .+-.++|.+++
T Consensus 22 Vvvfsk~t~~~p~Cp~C~~ak~lL~~~------------gv~~~~~vdV~~d~~~~~~l~~~tg~~tvP~vfI 82 (118)
T 2wem_A 22 VVVFLKGTPEQPQCGFSNAVVQILRLH------------GVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYL 82 (118)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHHT------------TCCCCEEEESSSCHHHHHHHHHHHTCCSSCEEEE
T ss_pred EEEEEecCCCCCccHHHHHHHHHHHHc------------CCCCCEEEEcCCCHHHHHHHHHHhCCCCcCeEEE
Confidence 455666333 23999999998877642 25 3677888887655433 37889999864
No 290
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=92.51 E-value=0.065 Score=45.51 Aligned_cols=41 Identities=10% Similarity=0.187 Sum_probs=30.7
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHH---HHHHHHhccccCCCCcEEEEEEECC
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEY---TIVANSFRYSQMYSNKLFFILVDFD 117 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pef---e~vA~s~~~~~~~~~~v~F~~vD~~ 117 (314)
...||.|... +|++|+.+.|.+ +++.+.+. +++.|...++.
T Consensus 22 ~~~vvef~d~----~Cp~C~~~~~~l~~~~~l~~~~~------~~v~~~~~~~~ 65 (191)
T 3l9s_A 22 EPQVLEFFSF----YCPHCYQFEEVLHVSDNVKKKLP------EGTKMTKYHVE 65 (191)
T ss_dssp SSCEEEEECT----TCHHHHHHHHTSCHHHHHHHHSC------TTCCEEEEECS
T ss_pred CCeEEEEECC----CChhHHHhChhccchHHHHHhCC------CCcEEEEEecc
Confidence 3578899998 999999999986 68887764 24555555544
No 291
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=92.45 E-value=0.27 Score=42.96 Aligned_cols=107 Identities=10% Similarity=0.102 Sum_probs=63.9
Q ss_pred CccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEEC----------------------------
Q psy8429 66 NYSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDF---------------------------- 116 (314)
Q Consensus 66 ~y~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~---------------------------- 116 (314)
..++|++|| +. ||+.|..=.+.|++..+.+.+. ++...-+..
T Consensus 52 GK~vVL~FyP~d----~TpvCt~E~~~f~~~~~~f~~~-----g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fplls 122 (216)
T 3sbc_A 52 GKYVVLAFIPLA----FTFVSPTEIIAFSEAAKKFEEQ-----GAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPLLA 122 (216)
T ss_dssp TSEEEEEECSCT----TSSHHHHHHHHHHHHHHHHHHT-----TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEE
T ss_pred CCeEEEEEEcCC----CCCcCchhhhHHHHhHHhhccC-----CceEEEeecCchhhHHHHHHHHHHhCCccCcccceEe
Confidence 345788888 55 9999999999999998888641 222222222
Q ss_pred CCCcchHHhCCcc------cCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCC-cceeeCCCCCc
Q psy8429 117 DEGSDVFQMLRLN------TAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI-QIRVFRPPNYS 182 (314)
Q Consensus 117 ~~~~~lf~~~~v~------svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~-~i~i~~p~~~~ 182 (314)
|.+.++++.||+- +.+.+++..|.|...-...++. ..+++.+++.+-|...--. .-....|.||.
T Consensus 123 D~~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~-~~grn~dEiLr~l~AlQ~~~~~~~~~Pa~W~ 194 (216)
T 3sbc_A 123 DTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDL-PVGRNVDEALRLVEAFQWTDKNGTVLPCNWT 194 (216)
T ss_dssp CTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECT-TBCCCHHHHHHHHHHHHHHHHHCCBBCTTCC
T ss_pred CCCCHHHHHcCCeeccCCceeeEEEEECCCCeEEEEEEcCC-CCCCCHHHHHHHHHHhhhHhhcCCCcCCCCC
Confidence 3356788888873 4677777777654421111222 2467888777777543100 01234566764
No 292
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=91.84 E-value=0.42 Score=41.92 Aligned_cols=94 Identities=12% Similarity=0.049 Sum_probs=49.5
Q ss_pred cEEEEEeeCCCCCC-Cccch-----hhHHHHHHHHHHhccc-----cCC----------CCcE-EEEEEECCC-CcchHH
Q psy8429 68 SAIVMFTALAPQRN-CHICV-----SASDEYTIVANSFRYS-----QMY----------SNKL-FFILVDFDE-GSDVFQ 124 (314)
Q Consensus 68 ~vvV~FtA~~~~~~-C~~C~-----~~~pefe~vA~s~~~~-----~~~----------~~~v-~F~~vD~~~-~~~lf~ 124 (314)
.+++.|++. | |++|. .-.|.|++. +..- ..+ ...+ .| .+=.|. +.++.+
T Consensus 50 ~vVL~F~ps----~~cp~C~~~~~~~El~~~~~~---~~gv~VvgIS~Ds~~~~~~f~~~~gl~~f-plLsD~~~~~vak 121 (224)
T 3keb_A 50 PKLIVTLLS----VDEDEHAGLLLLRETRRFLDS---WPHLKLIVITVDSPSSLARARHEHGLPNI-ALLSTLRGRDFHK 121 (224)
T ss_dssp CEEEEECSC----TTCSTTTSHHHHHHHHHHHTT---CTTSEEEEEESSCHHHHHHHHHHHCCTTC-EEEESTTCTTHHH
T ss_pred cEEEEEEeC----CCCCCCCCCccHHHHHHHHHH---cCCCEEEEEECCCHHHHHHHHHHcCCCCc-eEEEcCCchHHHH
Confidence 588889988 7 99999 666777665 3100 000 0011 11 111222 467888
Q ss_pred hCCccc---------CceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 125 MLRLNT---------APIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 125 ~~~v~s---------vPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
.||+.. .|+.+++.+.|+..-.....-..+..+.+++.+.|++..
T Consensus 122 ~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~ 175 (224)
T 3keb_A 122 RYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGE 175 (224)
T ss_dssp HTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHH
T ss_pred HhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhh
Confidence 888864 788888877655420000000012345666666665543
No 293
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=91.46 E-value=0.45 Score=37.31 Aligned_cols=58 Identities=14% Similarity=0.151 Sum_probs=37.4
Q ss_pred EEEEeeCCC-CCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCcchH----HhCCcccCceEEE
Q psy8429 70 IVMFTALAP-QRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGSDVF----QMLRLNTAPIFMH 136 (314)
Q Consensus 70 vV~FtA~~~-~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~~lf----~~~~v~svPtl~~ 136 (314)
+++|+.+.| ..||+.|+..+..+++..-. .-.|-.+|+++++++. +..|-.++|.+++
T Consensus 18 Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~---------~~~~~~~dv~~~~~~~~~l~~~sg~~tvP~vfI 80 (121)
T 3gx8_A 18 VVLFMKGTPEFPKCGFSRATIGLLGNQGVD---------PAKFAAYNVLEDPELREGIKEFSEWPTIPQLYV 80 (121)
T ss_dssp EEEEESBCSSSBCTTHHHHHHHHHHHHTBC---------GGGEEEEECTTCHHHHHHHHHHHTCCSSCEEEE
T ss_pred EEEEEeccCCCCCCccHHHHHHHHHHcCCC---------cceEEEEEecCCHHHHHHHHHHhCCCCCCeEEE
Confidence 344555322 34999999999888764211 0126778888876553 3447889999865
No 294
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=90.59 E-value=0.38 Score=39.32 Aligned_cols=30 Identities=10% Similarity=0.225 Sum_probs=25.8
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhc
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVANSFR 100 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~ 100 (314)
-.+||.|..- .|++|+.++|.++++.+.+.
T Consensus 22 ~~~vvEf~dy----~Cp~C~~~~~~~~~l~~~~~ 51 (184)
T 4dvc_A 22 SPVVSEFFSF----YCPHCNTFEPIIAQLKQQLP 51 (184)
T ss_dssp SCEEEEEECT----TCHHHHHHHHHHHHHHHTSC
T ss_pred CCEEEEEECC----CCHhHHHHhHHHHHHHhhcC
Confidence 4578888887 99999999999999888774
No 295
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=89.32 E-value=0.61 Score=39.27 Aligned_cols=31 Identities=16% Similarity=0.146 Sum_probs=25.4
Q ss_pred ccEEEEEeeCCCCCCCccchh-hHHHHHHHHHHhcc
Q psy8429 67 YSAIVMFTALAPQRNCHICVS-ASDEYTIVANSFRY 101 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~-~~pefe~vA~s~~~ 101 (314)
+.++++|.+. ||+.|.. =.|.|++.++++.+
T Consensus 49 ~vVL~fyP~~----~tp~Ct~~El~~f~~~~~ef~~ 80 (176)
T 4f82_A 49 RVVIFGLPGA----FTPTCSAQHVPGYVEHAEQLRA 80 (176)
T ss_dssp EEEEEEESCT----TCHHHHHTHHHHHHHHHHHHHH
T ss_pred eEEEEEEcCC----CCCCCCHHHHHHHHHHHHHHHh
Confidence 4456677777 9999998 89999999988864
No 296
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=89.14 E-value=0.72 Score=36.49 Aligned_cols=58 Identities=14% Similarity=0.070 Sum_probs=38.6
Q ss_pred EEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCc----chHHhC--------CcccCceEEE
Q psy8429 69 AIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS----DVFQML--------RLNTAPIFMH 136 (314)
Q Consensus 69 vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~----~lf~~~--------~v~svPtl~~ 136 (314)
+|+.||++ .|+.|+-.+. -.-|+.+.. +.++-|-.+|++.++ +..++. |-.++|.+++
T Consensus 1 ~V~vYtt~----~c~~c~~kk~--c~~aK~lL~----~kgV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi 70 (121)
T 1u6t_A 1 VIRVYIAS----SSGSTAIKKK--QQDVLGFLE----ANKIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIFN 70 (121)
T ss_dssp CEEEEECT----TCSCHHHHHH--HHHHHHHHH----HTTCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEEE
T ss_pred CEEEEecC----CCCCccchHH--HHHHHHHHH----HCCCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEEE
Confidence 46778888 9999964433 223334432 146899999999764 344566 7778997764
No 297
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=86.47 E-value=1.1 Score=38.18 Aligned_cols=50 Identities=14% Similarity=0.210 Sum_probs=36.1
Q ss_pred HcCCCCccEEEEEeeCCCCCCCccchhhHHHH-HHHHHHhccccCCCCcEEEEEEECCC
Q psy8429 61 KNGPRNYSAIVMFTALAPQRNCHICVSASDEY-TIVANSFRYSQMYSNKLFFILVDFDE 118 (314)
Q Consensus 61 ~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pef-e~vA~s~~~~~~~~~~v~F~~vD~~~ 118 (314)
.+++.....|+.|... .|++|+.+.|.. ..+.+.|.+ .+++.|...++.-
T Consensus 24 ~G~~~a~vtvvef~D~----~CP~C~~~~~~~~~~l~~~~~~----~g~v~~~~~~~p~ 74 (202)
T 3gha_A 24 LGKDDAPVTVVEFGDY----KCPSCKVFNSDIFPKIQKDFID----KGDVKFSFVNVMF 74 (202)
T ss_dssp ESCTTCSEEEEEEECT----TCHHHHHHHHHTHHHHHHHTTT----TTSEEEEEEECCC
T ss_pred ecCCCCCEEEEEEECC----CChhHHHHHHHhhHHHHHHhcc----CCeEEEEEEecCc
Confidence 3344444568888888 999999999986 666666642 3578888888764
No 298
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=85.87 E-value=1 Score=37.09 Aligned_cols=41 Identities=10% Similarity=0.280 Sum_probs=30.9
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHH-HHHHHHhccccCCCCcEEEEEEECC
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEY-TIVANSFRYSQMYSNKLFFILVDFD 117 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pef-e~vA~s~~~~~~~~~~v~F~~vD~~ 117 (314)
..+++.|+.. +|++|..+.|.. +++++.+. +++.+...++.
T Consensus 18 ~~~~ief~d~----~CP~C~~~~~~l~~~l~~~~~------~~v~~~~~~l~ 59 (195)
T 3c7m_A 18 DKTLIKVFSY----ACPFCYKYDKAVTGPVSEKVK------DIVAFTPFHLE 59 (195)
T ss_dssp TTEEEEEECT----TCHHHHHHHHHTHHHHHHHTT------TTCEEEEEECT
T ss_pred CcEEEEEEeC----cCcchhhCcHHHHHHHHHhCC------CceEEEEEecC
Confidence 3467788888 999999999999 99988764 34555555544
No 299
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=84.25 E-value=0.85 Score=39.80 Aligned_cols=106 Identities=11% Similarity=0.137 Sum_probs=54.6
Q ss_pred ccEEEEEe-eCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEE----------------------------CC
Q psy8429 67 YSAIVMFT-ALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVD----------------------------FD 117 (314)
Q Consensus 67 y~vvV~Ft-A~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD----------------------------~~ 117 (314)
.++|++|| +. ||+.|..=...|++..+.+.+. ++...-+. .|
T Consensus 57 K~vVL~FyP~d----~TpvCt~E~~~f~~~~~eF~~~-----g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpllsD 127 (219)
T 3tue_A 57 KWVVLFFYPLD----FTFVCPTEVIAFSDSVSRFNEL-----NCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILAD 127 (219)
T ss_dssp SEEEEEECSCT----TCSSCCHHHHHHHTTHHHHHTT-----TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEEC
T ss_pred CEEEEEEeccc----CCCCCchhHhhHHHHHhhhccC-----CcEEEEeeCCchhhHHHHhhhhHHhcCccccccccccC
Confidence 35788888 45 9999998888888888887641 22222222 24
Q ss_pred CCcchHHhCCcc----c--CceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCC-cceeeCCCCCc
Q psy8429 118 EGSDVFQMLRLN----T--APIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI-QIRVFRPPNYS 182 (314)
Q Consensus 118 ~~~~lf~~~~v~----s--vPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~-~i~i~~p~~~~ 182 (314)
.+.++++.||+- + .-..++..|.|+......++. ..+++.+++.+.|+..--. .-....|.||.
T Consensus 128 ~~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~~~~~~~-~~gr~~~EvLr~l~aLQ~~~~~~~~~Pa~W~ 198 (219)
T 3tue_A 128 KTKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQITVNDM-PVGRSVEEVLRLLEAFQFVEKHGEVCPANWK 198 (219)
T ss_dssp TTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECT-TCCCCHHHHHHHHHHHHHHHHC---------
T ss_pred cccHHHHHcCCcccCCCeeEEEEEEECCCCeEEEEEEecC-CCCCCHHHHHHHHHHhhhHHhcCCCcCCCCC
Confidence 456677777762 1 234555555543310011111 2367788887777643210 01334567774
No 300
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=82.08 E-value=2.9 Score=32.73 Aligned_cols=66 Identities=12% Similarity=0.210 Sum_probs=40.4
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCC-CCCCccchhhHHHHHHHHHHhccccCCCCcE-EEEEEECCCCcchH----HhCC
Q psy8429 54 QKYKEYIKNGPRNYSAIVMFTALAP-QRNCHICVSASDEYTIVANSFRYSQMYSNKL-FFILVDFDEGSDVF----QMLR 127 (314)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~FtA~~~-~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v-~F~~vD~~~~~~lf----~~~~ 127 (314)
+.-++++.++ .| |.|.-..| ...|+.|++....++. . .+ .|..+|+++++++. +.-+
T Consensus 11 e~i~~~i~~~----~V-vvF~Kgt~~~P~C~fc~~ak~lL~~----~--------gv~~~~~~~v~~~~~~r~~l~~~sg 73 (118)
T 2wul_A 11 EQLDALVKKD----KV-VVFLKGTPEQPQCGFSNAVVQILRL----H--------GVRDYAAYNVLDDPELRQGIKDYSN 73 (118)
T ss_dssp HHHHHHHHHS----SE-EEEESBCSSSBSSHHHHHHHHHHHH----T--------TCCSCEEEETTSCHHHHHHHHHHHT
T ss_pred HHHHHHHhcC----CE-EEEEcCCCCCCCCHHHHHHHHHHHH----h--------CCcCeEeecccCCHHHHHHHHHhcc
Confidence 3455666433 24 44543222 2379999988876652 1 13 36778988876554 4456
Q ss_pred cccCceEEE
Q psy8429 128 LNTAPIFMH 136 (314)
Q Consensus 128 v~svPtl~~ 136 (314)
-+++|.+++
T Consensus 74 ~~TvPqIFI 82 (118)
T 2wul_A 74 WPTIPQVYL 82 (118)
T ss_dssp CCSSCEEEE
T ss_pred CCCCCeEeE
Confidence 778999875
No 301
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=81.87 E-value=2.1 Score=37.13 Aligned_cols=44 Identities=14% Similarity=0.395 Sum_probs=32.7
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHH-HHHHHHHhccccCCCCcEEEEEEECCC
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDE-YTIVANSFRYSQMYSNKLFFILVDFDE 118 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pe-fe~vA~s~~~~~~~~~~v~F~~vD~~~ 118 (314)
...|+.|+.. .|++|+.+.|+ ++++.+.|-+ .+++.|...++.-
T Consensus 40 ~vtIvef~Dy----~CP~C~~~~~~~~~~l~~~~~~----~g~V~~v~~~~p~ 84 (226)
T 3f4s_A 40 PILMIEYASL----TCYHCSLFHRNVFPKIKEKYID----TGKMLYIFRHFPL 84 (226)
T ss_dssp SEEEEEEECT----TCHHHHHHHHHTHHHHHHHHTT----TTSEEEEEEECCC
T ss_pred CEEEEEEECC----CCHHHHHHHHHHHHHHHHHccc----CCeEEEEEEeCCC
Confidence 3467888888 99999999997 4777777742 2567777777653
No 302
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=79.44 E-value=2.6 Score=34.60 Aligned_cols=43 Identities=12% Similarity=0.373 Sum_probs=31.3
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHH-HHHHHHhccccCCCCcEEEEEEECC
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEY-TIVANSFRYSQMYSNKLFFILVDFD 117 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pef-e~vA~s~~~~~~~~~~v~F~~vD~~ 117 (314)
...|+.|+.. .|+.|..+.|.. +++.+.|.+ .+++.+...++.
T Consensus 12 ~~~i~~f~D~----~Cp~C~~~~~~l~~~l~~~~~~----~~~v~~~~~~~p 55 (186)
T 3bci_A 12 KPLVVVYGDY----KCPYCKELDEKVMPKLRKNYID----NHKVEYQFVNLA 55 (186)
T ss_dssp CCEEEEEECT----TCHHHHHHHHHHHHHHHHHTTT----TTSSEEEEEECC
T ss_pred CeEEEEEECC----CChhHHHHHHHHHHHHHHHhcc----CCeEEEEEEecC
Confidence 4467888888 999999999998 578777742 245666655553
No 303
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=76.67 E-value=4.8 Score=34.23 Aligned_cols=47 Identities=17% Similarity=0.164 Sum_probs=32.7
Q ss_pred CCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHH-HhccccCCCCcEEEEEEECC
Q psy8429 63 GPRNYSAIVMFTALAPQRNCHICVSASDEYTIVAN-SFRYSQMYSNKLFFILVDFD 117 (314)
Q Consensus 63 ~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~-s~~~~~~~~~~v~F~~vD~~ 117 (314)
++....+||.|+.. .|+.|+.+.|+....-+ .|.. .+++.+.--++.
T Consensus 12 ~~~a~vtivef~D~----~Cp~C~~~~~~~~~~l~~~~i~----~g~v~~v~r~~p 59 (205)
T 3gmf_A 12 NPAAKLRLVEFVSY----TCPHCSHFEIESEGQLKIGMVQ----PGKGAIEVRNFV 59 (205)
T ss_dssp CTTCSEEEEEEECT----TCHHHHHHHHHHHHHHHHHTTT----TTSEEEEEEECC
T ss_pred CCCCCeEEEEEECC----CCHHHHHHHHHHHHHHHHHhcc----CCeEEEEEEeCC
Confidence 33334567888888 99999999998755444 6632 367887776664
No 304
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=75.85 E-value=2.7 Score=35.09 Aligned_cols=41 Identities=10% Similarity=0.028 Sum_probs=30.9
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECC
Q psy8429 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFD 117 (314)
Q Consensus 68 ~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~ 117 (314)
.+|+.|... .|++|+.+.|+...+-+++. .+++.|.--++.
T Consensus 16 vtiv~f~D~----~Cp~C~~~~~~~~~~l~~~~-----~g~v~~v~r~~p 56 (182)
T 3gn3_A 16 RLFEVFLEP----TCPFSVKAFFKLDDLLAQAG-----EDNVTVRIRLQS 56 (182)
T ss_dssp EEEEEEECT----TCHHHHHHHTTHHHHHHHHC-----TTTEEEEEEECC
T ss_pred EEEEEEECC----CCHhHHHHHHHHHHHHHHhC-----CCCEEEEEEEcC
Confidence 467888887 99999999999988766652 256777766653
No 305
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=75.83 E-value=5.6 Score=36.34 Aligned_cols=93 Identities=13% Similarity=0.125 Sum_probs=50.4
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccc-----cCC----------CCcEEEEEEECCCCcchHHhCCc----
Q psy8429 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYS-----QMY----------SNKLFFILVDFDEGSDVFQMLRL---- 128 (314)
Q Consensus 68 ~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~-----~~~----------~~~v~F~~vD~~~~~~lf~~~~v---- 128 (314)
.+++.|| |.-||+.|..=.++|.+- .+..- ..+ ..++-|-.+ .|.+.++.+.||+
T Consensus 26 ~vvl~F~---p~~~tp~C~~e~~~~~~~--~~~~~~v~gis~D~~~~~~~f~~~~~l~fp~l-~D~~~~v~~~ygv~~~~ 99 (322)
T 4eo3_A 26 YTILFFF---PKAGTSGSTREAVEFSRE--NFEKAQVVGISRDSVEALKRFKEKNDLKVTLL-SDPEGILHEFFNVLENG 99 (322)
T ss_dssp EEEEEEC---SSTTSHHHHHHHHHHHHS--CCTTEEEEEEESCCHHHHHHHHHHHTCCSEEE-ECTTCHHHHHTTCEETT
T ss_pred eEEEEEE---CCCCCCCCHHHHHHHHHH--hhCCCEEEEEeCCCHHHHHHHHHhhCCceEEE-EcCchHHHHhcCCCCCC
Confidence 5888898 344898898766777531 11000 000 011222111 2345688889998
Q ss_pred ccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhh
Q psy8429 129 NTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 129 ~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~ 168 (314)
..+|+.++..+.|+.. ..+.--..+..++++.+++++.
T Consensus 100 ~~~r~tfiId~~G~i~--~~~~~v~~~~h~~~~l~~~~~~ 137 (322)
T 4eo3_A 100 KTVRSTFLIDRWGFVR--KEWRRVKVEGHVQEVKEALDRL 137 (322)
T ss_dssp EECCEEEEECTTSBEE--EEEESCCSTTHHHHHHHHHHHH
T ss_pred cCccEEEEECCCCEEE--EEEeCCCccccHHHHHHHHhhh
Confidence 4688888887776542 1111001233567777777654
No 306
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=69.99 E-value=2.3 Score=38.27 Aligned_cols=27 Identities=7% Similarity=0.107 Sum_probs=22.6
Q ss_pred ccEEEEEeeCCCCCCCccchhhHHHHHHHHH
Q psy8429 67 YSAIVMFTALAPQRNCHICVSASDEYTIVAN 97 (314)
Q Consensus 67 y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~ 97 (314)
..+++.||-+ .|+.|+++.++.+...+
T Consensus 148 k~~I~vFtDp----~CPYCkkl~~~l~~~l~ 174 (273)
T 3tdg_A 148 DKILYIVSDP----MCPHCQKELTKLRDHLK 174 (273)
T ss_dssp TCEEEEEECT----TCHHHHHHHHTHHHHHH
T ss_pred CeEEEEEECc----CChhHHHHHHHHHHHhh
Confidence 3578999999 99999999999985443
No 307
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=68.00 E-value=9.5 Score=31.82 Aligned_cols=31 Identities=10% Similarity=0.115 Sum_probs=23.2
Q ss_pred cEEEEEeeCCCCCCCccch-hhHHHHHHHHHHh-cc
Q psy8429 68 SAIVMFTALAPQRNCHICV-SASDEYTIVANSF-RY 101 (314)
Q Consensus 68 ~vvV~FtA~~~~~~C~~C~-~~~pefe~vA~s~-~~ 101 (314)
+++++|+. +.||+.|. .=.+.|++.+.++ .+
T Consensus 45 ~vVL~fyP---~~fTp~Ct~~e~~~f~~~~~~f~~~ 77 (182)
T 1xiy_A 45 KILLISLP---GAFTPTCSTKMIPGYEEEYDYFIKE 77 (182)
T ss_dssp EEEEEECS---CTTCHHHHHTHHHHHHHTHHHHHTT
T ss_pred cEEEEEeC---CCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 46666663 45999999 7788888888877 53
No 308
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=67.14 E-value=3.2 Score=40.93 Aligned_cols=62 Identities=16% Similarity=0.373 Sum_probs=40.3
Q ss_pred hhHHHHHHcCCCCccEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCC---cc----hHHhC
Q psy8429 54 QKYKEYIKNGPRNYSAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEG---SD----VFQML 126 (314)
Q Consensus 54 ~nf~~~v~~~~r~y~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~---~~----lf~~~ 126 (314)
+..++.+... -++.|+.+ ||+.|++.+.-+++.. +-|-.+|+++. ++ +-+..
T Consensus 9 ~~v~~~i~~~-----~v~vy~~~----~Cp~C~~~k~~L~~~~------------i~~~~~dv~~~~~~~~~~~~l~~~~ 67 (598)
T 2x8g_A 9 QWLRKTVDSA-----AVILFSKT----TCPYCKKVKDVLAEAK------------IKHATIELDQLSNGSAIQKCLASFS 67 (598)
T ss_dssp HHHHHHHHHC-----SEEEEECT----TCHHHHHHHHHHHHTT------------CCCEEEEGGGSTTHHHHHHHTHHHH
T ss_pred HHHHHHhccC-----CEEEEECC----CChhHHHHHHHHHHCC------------CCcEEEEcccCcchHHHHHHHHHHh
Confidence 4556665322 26778998 9999999988777432 33446676643 22 33356
Q ss_pred CcccCceEEE
Q psy8429 127 RLNTAPIFMH 136 (314)
Q Consensus 127 ~v~svPtl~~ 136 (314)
+.+++|.+++
T Consensus 68 g~~tvP~v~i 77 (598)
T 2x8g_A 68 KIETVPQMFV 77 (598)
T ss_dssp SCCCSCEEEE
T ss_pred CCceeCEEEE
Confidence 7889999853
No 309
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=66.89 E-value=7.9 Score=29.83 Aligned_cols=43 Identities=9% Similarity=0.182 Sum_probs=29.2
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCc-------chHHhCCc
Q psy8429 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS-------DVFQMLRL 128 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~-------~lf~~~~v 128 (314)
+.+|+.+ +|+.|+....-+++- .+-|-.+|+.+++ ++.+++|+
T Consensus 7 i~iY~~~----~C~~C~ka~~~L~~~------------gi~y~~~di~~~~~~~~~l~~~~~~~g~ 56 (120)
T 2kok_A 7 VTIYGIK----NCDTMKKARIWLEDH------------GIDYTFHDYKKEGLDAETLDRFLKTVPW 56 (120)
T ss_dssp EEEEECS----SCHHHHHHHHHHHHH------------TCCEEEEEHHHHCCCHHHHHHHHHHSCG
T ss_pred EEEEECC----CChHHHHHHHHHHHc------------CCcEEEEeeeCCCCCHHHHHHHHHHcCh
Confidence 5678888 999999887766641 2556667886544 34566663
No 310
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=62.33 E-value=3 Score=39.05 Aligned_cols=56 Identities=14% Similarity=0.250 Sum_probs=31.4
Q ss_pred EEEEeeCCCCCCCccchhhHH-HHHHHHHHhccccCCCCcEEEEEEEC-CCC----cchHHhCCcccCceEEE
Q psy8429 70 IVMFTALAPQRNCHICVSASD-EYTIVANSFRYSQMYSNKLFFILVDF-DEG----SDVFQMLRLNTAPIFMH 136 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C~~~~p-efe~vA~s~~~~~~~~~~v~F~~vD~-~~~----~~lf~~~~v~svPtl~~ 136 (314)
|++|+.+ ||+.|++... -+++..-.| ..+....+|- +++ .++.+..+.+++|.+++
T Consensus 263 VvVYsk~----~CPyC~~Ak~~LL~~~gV~y-------~eidVlEld~~~~~~e~~~~L~~~tG~~TVPqVFI 324 (362)
T 2jad_A 263 IFVASKT----YCPYSHAALNTLFEKLKVPR-------SKVLVLQLNDMKEGADIQAALYEINGQRTVPNIYI 324 (362)
T ss_dssp EEEEECT----TCHHHHHHHHHHHTTTCCCT-------TTEEEEEGGGSTTHHHHHHHHHHHHCCCSSCEEEE
T ss_pred EEEEEcC----CCcchHHHHHHHHHHcCCCc-------ceEEEEEeccccCCHHHHHHHHHHHCCCCcCEEEE
Confidence 5678888 9999998764 233211111 1232222221 223 23445678999999864
No 311
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=61.40 E-value=3.7 Score=34.41 Aligned_cols=47 Identities=11% Similarity=-0.006 Sum_probs=33.2
Q ss_pred CCCcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 117 DEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 117 ~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
+++.+..+++|++++|+++++.+| +. .....|..+.+.+.+.|.+..
T Consensus 163 ~~~~~~a~~~gv~g~Pt~~i~~~G-~~-----~~~~~G~~~~~~l~~~l~~~~ 209 (216)
T 2in3_A 163 LAGFQRVAQWGISGFPALVVESGT-DR-----YLITTGYRPIEALRQLLDTWL 209 (216)
T ss_dssp HHHHHHHHHTTCCSSSEEEEEETT-EE-----EEEESSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcccceEEEEECC-EE-----EEeccCCCCHHHHHHHHHHHH
Confidence 345677899999999999988765 21 011245567888988887764
No 312
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=49.96 E-value=15 Score=28.66 Aligned_cols=35 Identities=14% Similarity=0.308 Sum_probs=25.9
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCc
Q psy8429 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS 120 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~ 120 (314)
+.+|+.+ +|+.|+....-+++ .++-|-.+|+++++
T Consensus 3 i~lY~~~----~C~~C~ka~~~L~~------------~gi~y~~~di~~~~ 37 (132)
T 1z3e_A 3 VTLYTSP----SCTSCRKARAWLEE------------HEIPFVERNIFSEP 37 (132)
T ss_dssp EEEEECT----TCHHHHHHHHHHHH------------TTCCEEEEETTTSC
T ss_pred EEEEeCC----CChHHHHHHHHHHH------------cCCceEEEEccCCC
Confidence 5678888 99999988776663 13556678888754
No 313
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=46.72 E-value=10 Score=30.89 Aligned_cols=41 Identities=15% Similarity=0.221 Sum_probs=28.6
Q ss_pred CcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 119 ~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
+.+..+++||+++|++++ +| +. + .|..+.+.+.+.|.+...
T Consensus 138 ~~~~a~~~gv~GtPt~vv--nG-~~-------~-~G~~~~~~l~~~i~~~~~ 178 (186)
T 3bci_A 138 DKKIAKDNHIKTTPTAFI--NG-EK-------V-EDPYDYESYEKLLKDKIK 178 (186)
T ss_dssp HHHHHHHTTCCSSSEEEE--TT-EE-------C-SCTTCHHHHHHHHHC---
T ss_pred HHHHHHHcCCCCCCeEEE--CC-EE-------c-CCCCCHHHHHHHHHHHHH
Confidence 456789999999999987 33 21 1 355778999999877653
No 314
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=44.00 E-value=22 Score=27.32 Aligned_cols=81 Identities=15% Similarity=0.252 Sum_probs=44.6
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCc----chHHhCCcccCceEEEecCCCCCCC
Q psy8429 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS----DVFQMLRLNTAPIFMHFPAKGKPKP 145 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~----~lf~~~~v~svPtl~~f~p~~~~~~ 145 (314)
+.+|+.+ +|+.|+....-+++ .++-|-.+|+.+++ ++-+-++-.+.|.--++...+..
T Consensus 2 i~iY~~~----~C~~c~ka~~~L~~------------~gi~~~~~di~~~~~~~~el~~~l~~~~~~~~~l~n~~~~~-- 63 (120)
T 3l78_A 2 VTLFLSP----SCTSCRKARAWLNR------------HDVVFQEHNIMTSPLSRDELLKILSYTENGTEDIISTRSKV-- 63 (120)
T ss_dssp EEEEECS----SCHHHHHHHHHHHH------------TTCCEEEEETTTSCCCHHHHHHHHHHCSSTHHHHBCTTCHH--
T ss_pred EEEEeCC----CCHHHHHHHHHHHH------------cCCCeEEEecccCCCcHHHHHHHHhhcCCCHHHhhcCCcHH--
Confidence 4678888 99999988765542 24667888988754 33333333344433344443210
Q ss_pred CCccceeecccCHHHHHHHHHhh
Q psy8429 146 SDTLDIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 146 ~~~~~~~~~~~~a~~l~~fI~~~ 168 (314)
..+.+......+.+++.+.+.++
T Consensus 64 ~k~l~~~~~~ls~~~~~~~m~~~ 86 (120)
T 3l78_A 64 FQKLDIDVDELSVSELINLISKN 86 (120)
T ss_dssp HHHTTCCGGGCCHHHHHHHHHHC
T ss_pred HHHcCCCcccCCHHHHHHHHHhC
Confidence 00011111235677788877765
No 315
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=42.40 E-value=12 Score=31.29 Aligned_cols=45 Identities=20% Similarity=0.169 Sum_probs=29.7
Q ss_pred CcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 119 ~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
+.+..+++||+++|++++...+ +. +....+..+.+++.+.+++.+
T Consensus 158 ~~~~a~~~gv~g~Pt~~v~~~~-~~-----~~~~~g~~~~e~~~~~i~~~~ 202 (208)
T 3kzq_A 158 QLSLAKSLGVNSYPSLVLQIND-AY-----FPIEVDYLSTEPTLKLIRERI 202 (208)
T ss_dssp HHHHHHHTTCCSSSEEEEEETT-EE-----EEECCCSSCSHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcccEEEEEECC-EE-----EEeeCCCCCHHHHHHHHHHHH
Confidence 4466788999999999987643 21 111234456777887777654
No 316
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=40.35 E-value=21 Score=30.55 Aligned_cols=50 Identities=12% Similarity=-0.010 Sum_probs=31.6
Q ss_pred cchHHh-CCcccCceEEEecCCCCCCCCCccc-eeecccCHHHHHHHHHhhcC
Q psy8429 120 SDVFQM-LRLNTAPIFMHFPAKGKPKPSDTLD-IQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 120 ~~lf~~-~~v~svPtl~~f~p~~~~~~~~~~~-~~~~~~~a~~l~~fI~~~~~ 170 (314)
.+..++ +||+++|++++.+++|+.-.. ..+ ...|..+.+.|.+.|.+.++
T Consensus 160 ~~~a~~~~GV~GtPtfvv~~~nG~~~~G-a~~~~~~G~~~~e~l~~~I~~~l~ 211 (226)
T 3f4s_A 160 KSLAINKLGITAVPIFFIKLNDDKSYIE-HNKVKHGGYKELKYFTNVIDKLYG 211 (226)
T ss_dssp HHHHHHHHCCCSSCEEEEEECCTTCCCC-GGGGEEESCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcCCEEEEEcCCCEEeeC-CCCcccccccCHHHHHHHHHHHHh
Confidence 355677 999999999997765443111 111 11344458888888877654
No 317
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=38.98 E-value=36 Score=27.91 Aligned_cols=54 Identities=7% Similarity=0.030 Sum_probs=34.5
Q ss_pred cEEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEE-EEEEECCC---CcchHHhCCcc
Q psy8429 68 SAIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLF-FILVDFDE---GSDVFQMLRLN 129 (314)
Q Consensus 68 ~vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~-F~~vD~~~---~~~lf~~~~v~ 129 (314)
++|++|+. ..||+.|..=.+.|++.+.++.+ ..+. ..-+-.|. ..+-.++.++.
T Consensus 44 ~vVL~fyP---~~fTp~Ct~e~~~f~~~~~ef~~-----~gv~~VigIS~D~~~~~~~w~~~~~~~ 101 (171)
T 2xhf_A 44 KGILFSVV---GAFVPGSNNHIPEYLSLYDKFKE-----EGYHTIACIAVNDPFVMAAWGKTVDPE 101 (171)
T ss_dssp EEEEEECS---CTTCTTTTSSHHHHHHTHHHHHH-----TTCCEEEEEESSCHHHHHHHHHHHCTT
T ss_pred eEEEEEEC---CCCCCcCHHHHHHHHHHHHHHHH-----CCCCEEEEEeCCCHHHHHHHHHhcCCC
Confidence 46666663 45999999999999998888864 2232 43444444 24555666663
No 318
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=34.82 E-value=41 Score=28.00 Aligned_cols=42 Identities=19% Similarity=0.157 Sum_probs=30.4
Q ss_pred CcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcCC
Q psy8429 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTDI 171 (314)
Q Consensus 119 ~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~~ 171 (314)
+.+..+++||+++|++++ + |+. + .|..+.+.|.+.|.+....
T Consensus 152 ~~~~a~~~gV~gtPtfvv--n-G~~-------~-~G~~~~e~l~~~i~~~~~~ 193 (202)
T 3gha_A 152 DSDLNQKMNIQATPTIYV--N-DKV-------I-KNFADYDEIKETIEKELKG 193 (202)
T ss_dssp HHHHHHHTTCCSSCEEEE--T-TEE-------C-SCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcCCEEEE--C-CEE-------e-cCCCCHHHHHHHHHHHHHh
Confidence 456788999999999997 3 321 1 3567888888888776543
No 319
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=34.03 E-value=23 Score=26.84 Aligned_cols=35 Identities=14% Similarity=0.220 Sum_probs=25.2
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCc
Q psy8429 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS 120 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~ 120 (314)
+.+|+.+ +|+.|+....-+++ .++-|-.+|+.+++
T Consensus 2 i~iY~~~----~C~~C~kak~~L~~------------~gi~~~~~di~~~~ 36 (114)
T 1rw1_A 2 YVLYGIK----ACDTMKKARTWLDE------------HKVAYDFHDYKAVG 36 (114)
T ss_dssp EEEEECS----SCHHHHHHHHHHHH------------TTCCEEEEEHHHHC
T ss_pred EEEEECC----CChHHHHHHHHHHH------------CCCceEEEeecCCC
Confidence 4578888 99999987765553 23667778887644
No 320
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=31.36 E-value=25 Score=28.41 Aligned_cols=40 Identities=8% Similarity=-0.049 Sum_probs=26.9
Q ss_pred CcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 119 ~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
+.+..+++||+++|++++ +| +. -. .+. +.+++.+.|.+.+
T Consensus 144 ~~~~a~~~gv~gtPt~vi--ng-~~------~~-~g~-~~~~l~~~i~~~~ 183 (193)
T 2rem_A 144 ARAYALKVRPVGTPTIVV--NG-RY------MV-TGH-DFEDTLRITDYLV 183 (193)
T ss_dssp HHHHHHHHCCSSSSEEEE--TT-TE------EE-CCS-SHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEEE--CC-EE------Ee-cCC-CHHHHHHHHHHHH
Confidence 456788999999999765 33 21 11 233 7788888877654
No 321
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=30.68 E-value=36 Score=26.10 Aligned_cols=36 Identities=14% Similarity=0.278 Sum_probs=26.1
Q ss_pred EEEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCc
Q psy8429 69 AIVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS 120 (314)
Q Consensus 69 vvV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~ 120 (314)
.+.+|+.+ +|+.|+....-+++ .++-|-.+|+.+++
T Consensus 4 Mi~iY~~~----~C~~c~ka~~~L~~------------~gi~~~~~di~~~~ 39 (120)
T 3fz4_A 4 MLTFYEYP----KCSTCRRAKAELDD------------LAWDYDAIDIKKNP 39 (120)
T ss_dssp SEEEEECS----SCHHHHHHHHHHHH------------HTCCEEEEETTTSC
T ss_pred eEEEEeCC----CChHHHHHHHHHHH------------cCCceEEEEeccCc
Confidence 35678888 99999988765552 23667788888754
No 322
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=29.51 E-value=33 Score=28.18 Aligned_cols=40 Identities=10% Similarity=-0.014 Sum_probs=26.6
Q ss_pred CcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhc
Q psy8429 119 GSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRT 169 (314)
Q Consensus 119 ~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~ 169 (314)
+.+..+++||+++|++++ +| +. - .++.+.+.+.+.|...+
T Consensus 143 ~~~~a~~~gv~gtPt~vv--ng-~~------~--~~~~~~e~l~~~i~~ll 182 (193)
T 3hz8_A 143 MQELTETFQIDGVPTVIV--GG-KY------K--VEFADWESGMNTIDLLA 182 (193)
T ss_dssp HHHHHHHTTCCSSSEEEE--TT-TE------E--ECCSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcCCEEEE--CC-EE------E--ecCCCHHHHHHHHHHHH
Confidence 456688999999999997 32 21 1 23337777777766544
No 323
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=28.69 E-value=34 Score=26.26 Aligned_cols=35 Identities=11% Similarity=0.164 Sum_probs=25.4
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCc
Q psy8429 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS 120 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~ 120 (314)
+.+|+.+ +|+.|+....-+++ .++-|-.+|+.+++
T Consensus 6 i~iY~~p----~C~~c~ka~~~L~~------------~gi~~~~~di~~~~ 40 (120)
T 3gkx_A 6 TLFLQYP----ACSTCQKAKKWLIE------------NNIEYTNRLIVDDN 40 (120)
T ss_dssp CEEEECT----TCHHHHHHHHHHHH------------TTCCCEEEETTTTC
T ss_pred EEEEECC----CChHHHHHHHHHHH------------cCCceEEEecccCc
Confidence 5678888 99999987765542 24667788887754
No 324
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=27.10 E-value=56 Score=27.37 Aligned_cols=40 Identities=18% Similarity=0.177 Sum_probs=29.1
Q ss_pred cchH-HhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHhhcC
Q psy8429 120 SDVF-QMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIADRTD 170 (314)
Q Consensus 120 ~~lf-~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~~~~ 170 (314)
.+.. +++||+++|++++ +|+. + .|..+.+.|.+.|.+..+
T Consensus 157 ~~~a~~~~GV~GtPtfvv---ng~~-------~-~G~~~~e~l~~~i~~~~~ 197 (205)
T 3gmf_A 157 TDEAINQYNVSGTPSFMI---DGIL-------L-AGTHDWASLRPQILARLN 197 (205)
T ss_dssp HHHHHHHHCCCSSSEEEE---TTEE-------C-TTCCSHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCccCCEEEE---CCEE-------E-eCCCCHHHHHHHHHHHhh
Confidence 3456 8899999999997 3221 1 366788999998877654
No 325
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=25.04 E-value=22 Score=29.76 Aligned_cols=18 Identities=11% Similarity=0.167 Sum_probs=15.0
Q ss_pred CcchHHhCCcccCceEEE
Q psy8429 119 GSDVFQMLRLNTAPIFMH 136 (314)
Q Consensus 119 ~~~lf~~~~v~svPtl~~ 136 (314)
+.+..+++||+++|++++
T Consensus 39 ~~~~a~~~gi~gvP~fvi 56 (197)
T 1un2_A 39 QEKAAADVQLRGVPAMFV 56 (197)
T ss_dssp HHHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHcCCCcCCEEEE
Confidence 455688999999999976
No 326
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=22.75 E-value=4.1 Score=22.99 Aligned_cols=13 Identities=23% Similarity=0.572 Sum_probs=10.4
Q ss_pred CCCCccchhhHHH
Q psy8429 79 QRNCHICVSASDE 91 (314)
Q Consensus 79 ~~~C~~C~~~~pe 91 (314)
+..|+.|+++.|.
T Consensus 6 ~vqcpvcqq~mpa 18 (29)
T 3vhs_A 6 QVQCPVCQQMMPA 18 (29)
T ss_dssp EEECTTTCCEEEG
T ss_pred eeeChHHHHhCcH
Confidence 4479999998874
No 327
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=22.16 E-value=49 Score=27.20 Aligned_cols=41 Identities=7% Similarity=0.043 Sum_probs=0.0
Q ss_pred CCCCcchHHhCCcccCceEEEecCCCCCCCCCccceeecccCHHHHHHHHHh
Q psy8429 116 FDEGSDVFQMLRLNTAPIFMHFPAKGKPKPSDTLDIQRVGYSAEAIVKWIAD 167 (314)
Q Consensus 116 ~~~~~~lf~~~~v~svPtl~~f~p~~~~~~~~~~~~~~~~~~a~~l~~fI~~ 167 (314)
+.++.+..+++|++++|++++ +| ....|..+.+.+.+.|.+
T Consensus 153 v~~~~~~a~~~Gv~G~Ptfvi--~g---------~~~~G~~~~~~l~~~l~~ 193 (203)
T 2imf_A 153 YDEQTHAAIERKVFGVPTMFL--GD---------EMWWGNDRLFMLESAMGR 193 (203)
T ss_dssp HHHHHHHHHHTTCCSSSEEEE--TT---------EEEESGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCcCCEEEE--CC---------EEEECCCCHHHHHHHHhc
No 328
>2q67_A Potassium channel protein; inverted teepee, helix bundle, tetramer, central cavity, ION metal transport, membrane protein; 2.30A {Bacillus cereus} PDB: 2q68_A 2q6a_A 2q69_A 2ahy_A 2ahz_A
Probab=20.88 E-value=2.6e+02 Score=20.78 Aligned_cols=36 Identities=11% Similarity=0.081 Sum_probs=21.4
Q ss_pred hcchhhhhhhhhHHHHHHHHHHHhhhhhhhhhhcCC
Q psy8429 202 RNNLEFLYNKLMWGVAAVLFCFAMISGQMWNHIRGP 237 (314)
Q Consensus 202 k~~~~~l~~~~~w~~~sl~~~~~~isG~mfn~Ir~~ 237 (314)
|..++.++++.++..+.+++..+..+..+|..+.+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~e~~ 48 (114)
T 2q67_A 13 RACLRAWKDKEFQVLFVLTILTLISGTIFYSTVEGL 48 (114)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 334445566666666666665666666667666654
No 329
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=20.08 E-value=47 Score=26.28 Aligned_cols=81 Identities=5% Similarity=0.133 Sum_probs=45.3
Q ss_pred EEEEeeCCCCCCCccchhhHHHHHHHHHHhccccCCCCcEEEEEEECCCCc----chHHhCCcccCceEEEecCCCCCCC
Q psy8429 70 IVMFTALAPQRNCHICVSASDEYTIVANSFRYSQMYSNKLFFILVDFDEGS----DVFQMLRLNTAPIFMHFPAKGKPKP 145 (314)
Q Consensus 70 vV~FtA~~~~~~C~~C~~~~pefe~vA~s~~~~~~~~~~v~F~~vD~~~~~----~lf~~~~v~svPtl~~f~p~~~~~~ 145 (314)
+.+|+.+ +|+.|+....-+++ ..+-|-.+|+.+.+ ++.+.++-.+.|.--++...+..
T Consensus 4 itiY~~p----~C~~crkak~~L~~------------~gi~~~~idi~~~~~~~~eL~~~~~~~g~p~~~l~n~~~~~-- 65 (141)
T 1s3c_A 4 ITIYHNP----ASGTSRNTLEMIRN------------SGTEPTIILYLENPPSRDELVKLIADMGISVRALLRKNVEP-- 65 (141)
T ss_dssp CEEECCT----TCHHHHHHHHHHHH------------TTCCCEEECTTTSCCCHHHHHHHHHHHTSCHHHHBCSSSHH--
T ss_pred EEEEECC----CChHHHHHHHHHHH------------cCCCEEEEECCCCCccHHHHHHHhcccCCCHHHhccCCchh--
Confidence 4577888 99999987665442 24667778888743 33334444456644445443211
Q ss_pred CCccceeecccCHHHHHHHHHhh
Q psy8429 146 SDTLDIQRVGYSAEAIVKWIADR 168 (314)
Q Consensus 146 ~~~~~~~~~~~~a~~l~~fI~~~ 168 (314)
..+.+......+.+++.+.+.++
T Consensus 66 yk~l~l~~~~ls~~~~~~lm~~~ 88 (141)
T 1s3c_A 66 YEQLGLAEDKFTDDQLIDFMLQH 88 (141)
T ss_dssp HHHTTTTSSCCCHHHHHHHHHHS
T ss_pred HHhcCCccccCCHHHHHHHHHhC
Confidence 00011111235677788777765
Done!