BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy843
(109 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|195377946|ref|XP_002047748.1| GJ13606 [Drosophila virilis]
gi|194154906|gb|EDW70090.1| GJ13606 [Drosophila virilis]
Length = 128
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
Query: 9 LTHKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKE 68
L +A+T +G T+V WHP+ PFPYEH+ PLP + T+ ++K ++ N FK K
Sbjct: 32 LVDSVAVTRNGKTIVAWHPDTPFPYEHTKPLPTIVENQTSEVIKEAALKTAMNAFKNKHP 91
Query: 69 EFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
E RQ+LM +T T KHRWFP + R KK P+ DR YL
Sbjct: 92 EVARQELMRLTHTTKHRWFP--RARDKKAKKTPM--DRPYL 128
>gi|328705379|ref|XP_003242780.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like
[Acyrthosiphon pisum]
Length = 117
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Query: 13 IAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEFVR 72
I +T D +T+VC+HPE FPYE + PLPV + Q NS+LKVQN ++ VF E V+
Sbjct: 24 IVVTDDASTIVCYHPESSFPYECTKPLPVNKVQD-NSVLKVQNKDFVHEVFSKPNNEIVQ 82
Query: 73 QDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
Q+LM +T+T KHRW P +K K+ + + DREYL
Sbjct: 83 QELMKMTYTTKHRWVPPKKW--KRNFAHQKLVDREYL 117
>gi|195129449|ref|XP_002009168.1| GI11410 [Drosophila mojavensis]
gi|193920777|gb|EDW19644.1| GI11410 [Drosophila mojavensis]
Length = 128
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 7 VPLTHKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPK 66
+ L ++A+T +G T+V WHP+ PFPYEH+ PLP ++ ++ ++K +Q FK K
Sbjct: 30 ISLVDRVAVTKNGKTIVAWHPDTPFPYEHTKPLPQFVEKQSSDVIKETALQTAMTAFKNK 89
Query: 67 KEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
E RQ+LM +T+T KHRWFP + R+ K+ P+ DR YL
Sbjct: 90 FPEVARQELMKLTYTTKHRWFPRARDRKAKK--TPM--DRPYL 128
>gi|239792197|dbj|BAH72467.1| ACYPI009119 [Acyrthosiphon pisum]
Length = 119
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 13 IAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEFVR 72
I +T D +T+VC+HPE FPYE + PLPV + Q NS+LKVQN ++ VF E V+
Sbjct: 24 IVVTDDASTIVCYHPESSFPYECTKPLPVNKVQD-NSVLKVQNKDFVHEVFSKPNNEIVQ 82
Query: 73 QDLMNITFTNKHRWFPVRKMRQK 95
Q+LM +T+T KHRW P +KM +K
Sbjct: 83 QELMKMTYTTKHRWVPPKKMEKK 105
>gi|350422914|ref|XP_003493327.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like [Bombus
impatiens]
Length = 119
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 67/103 (65%), Gaps = 5/103 (4%)
Query: 7 VPLTHKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPK 66
V L +IAI + ++CWHPE+ FPYE+SLPLP +Q S+NS+L + +EI VFK K
Sbjct: 22 VKLPSEIAIPMNKDMIICWHPEREFPYEYSLPLPEEKQISSNSVLCIGE-KEIAEVFKQK 80
Query: 67 KEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
KEE V ++L +T+T KHRW+P + +R + + +R YL
Sbjct: 81 KEEVVVEELSKLTYTTKHRWYP----KNWRRRLRKVETERPYL 119
>gi|340727181|ref|XP_003401927.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like [Bombus
terrestris]
gi|340727543|ref|XP_003402101.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like [Bombus
terrestris]
Length = 119
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 7 VPLTHKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPK 66
V L +IAI + ++CWHPE+ FPYE+SLPLP +Q S+NS+L + +EI VFK K
Sbjct: 22 VKLPSEIAIPMNKDMIICWHPEREFPYEYSLPLPEEKQISSNSVLCIGE-KEIAEVFKQK 80
Query: 67 KEEFVRQDLMNITFTNKHRWFP 88
KEE V ++L +T+T KHRW+P
Sbjct: 81 KEEVVVEELSKLTYTTKHRWYP 102
>gi|195021044|ref|XP_001985318.1| GH16997 [Drosophila grimshawi]
gi|193898800|gb|EDV97666.1| GH16997 [Drosophila grimshawi]
Length = 127
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
Query: 9 LTHKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKE 68
L +A+T +G T+V WHPE FPYEH+ PLP T ++ ++ +K +Q + FK K
Sbjct: 31 LVDSVAVTRNGRTIVAWHPETKFPYEHTKPLPHTVEKQSSEYIKETAMQSAMSAFKNKHP 90
Query: 69 EFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
E RQ+LM +T T KHRWFP + R KK P+ DR YL
Sbjct: 91 EVARQELMKLTHTTKHRWFP--RARDKKAKKTPM--DRPYL 127
>gi|242015566|ref|XP_002428424.1| hypothetical protein Phum_PHUM380210 [Pediculus humanus corporis]
gi|212513036|gb|EEB15686.1| hypothetical protein Phum_PHUM380210 [Pediculus humanus corporis]
Length = 125
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 56/76 (73%)
Query: 13 IAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEFVR 72
I +T D + VVCWHPE+ +PYE S P+ ++ +NS+LKVQ+ +E+ +V KPK+++ VR
Sbjct: 32 ITMTDDSSVVVCWHPEESYPYEMSQPIKEKKKIVSNSLLKVQSNKELLSVLKPKRKDLVR 91
Query: 73 QDLMNITFTNKHRWFP 88
Q+LM +T + KH WFP
Sbjct: 92 QELMALTHSQKHVWFP 107
>gi|195582086|ref|XP_002080859.1| GD10711 [Drosophila simulans]
gi|194192868|gb|EDX06444.1| GD10711 [Drosophila simulans]
Length = 124
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
Query: 9 LTHKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKE 68
L +A+T +G T+V WHP+ P PYE++LPLP + +++++K ++ FK K
Sbjct: 28 LVEAVAVTKNGRTIVAWHPDTPVPYENTLPLPKISEIQSSAVVKESALKTAMRAFKSKHP 87
Query: 69 EFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
E RQ+LM +T T KHRWFP + R KK P+ DR YL
Sbjct: 88 EVARQELMQLTHTTKHRWFP--RARDKKAKQTPM--DRPYL 124
>gi|91078416|ref|XP_974657.1| PREDICTED: similar to mitochondrial ribosomal protein L42
CG12921-PA [Tribolium castaneum]
gi|270003875|gb|EFA00323.1| hypothetical protein TcasGA2_TC003161 [Tribolium castaneum]
Length = 119
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 66/110 (60%), Gaps = 8/110 (7%)
Query: 3 TKRLVPL---THKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEI 59
TKRL HKI +T D +T V WHP+Q FPYE + PLP + + T S+LK Q ++
Sbjct: 15 TKRLFSAKFPDHKIVLTDDESTYVAWHPKQDFPYECTQPLPEKQVEDT-SVLKTQLTPQL 73
Query: 60 YNVFKPKKEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
VF K E RQ+LMNIT T KHRWFP + R K+ P+ DREYL
Sbjct: 74 KEVFNKKTPEQARQELMNITHTTKHRWFP--RARDKRAKKTPM--DREYL 119
>gi|17647695|ref|NP_523673.1| mitochondrial ribosomal protein L42, isoform A [Drosophila
melanogaster]
gi|320543737|ref|NP_001188899.1| mitochondrial ribosomal protein L42, isoform B [Drosophila
melanogaster]
gi|386767632|ref|NP_001246232.1| mitochondrial ribosomal protein L42, isoform C [Drosophila
melanogaster]
gi|7303805|gb|AAF58852.1| mitochondrial ribosomal protein L42, isoform A [Drosophila
melanogaster]
gi|17944401|gb|AAL48091.1| RE72116p [Drosophila melanogaster]
gi|220948772|gb|ACL86929.1| mRpL42-PA [synthetic construct]
gi|220958266|gb|ACL91676.1| mRpL42-PA [synthetic construct]
gi|318068559|gb|ADV37147.1| mitochondrial ribosomal protein L42, isoform B [Drosophila
melanogaster]
gi|383302377|gb|AFH07987.1| mitochondrial ribosomal protein L42, isoform C [Drosophila
melanogaster]
Length = 124
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
Query: 9 LTHKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKE 68
L +A+T +G T+V WHP+ P PYE++LPLP + +++++K ++ FK K
Sbjct: 28 LVEAVAVTKNGRTIVAWHPDTPVPYENTLPLPEISEIQSSAVVKESALKTAMRAFKSKHP 87
Query: 69 EFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
E RQ+LM +T T KHRWFP + R +K P+ DR YL
Sbjct: 88 EVARQELMQLTHTTKHRWFP--RARDRKAKQTPM--DRPYL 124
>gi|195333013|ref|XP_002033186.1| GM21179 [Drosophila sechellia]
gi|194125156|gb|EDW47199.1| GM21179 [Drosophila sechellia]
Length = 124
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
Query: 9 LTHKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKE 68
L +A+T +G T+V WHP+ P PYE++LPLP + +++++K ++ FK K
Sbjct: 28 LVEAVAVTKNGRTIVAWHPDTPVPYENTLPLPKISEIQSSAVVKESALKTAMRAFKSKHP 87
Query: 69 EFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
E RQ+LM +T T KHRWFP + R +K P+ DR YL
Sbjct: 88 EVSRQELMQLTHTTKHRWFP--RARDRKAKQTPM--DRPYL 124
>gi|195475240|ref|XP_002089892.1| GE19333 [Drosophila yakuba]
gi|194175993|gb|EDW89604.1| GE19333 [Drosophila yakuba]
Length = 124
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 9 LTHKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKE 68
L +A+T +G T+V WHP+ P PYE++ PLP + ++S++K ++ FK K
Sbjct: 28 LVEAVAVTKNGRTIVAWHPDTPVPYENTQPLPKFSEIQSSSVVKESALKTAMRAFKSKHP 87
Query: 69 EFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
E RQ+LM +T T KHRWFP + R +K P+ DR YL
Sbjct: 88 EVARQELMQLTHTTKHRWFP--RARDRKAKKTPM--DRPYL 124
>gi|194858107|ref|XP_001969103.1| GG24134 [Drosophila erecta]
gi|190660970|gb|EDV58162.1| GG24134 [Drosophila erecta]
Length = 124
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 9 LTHKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKE 68
L +A+T +G T+V WHP+ P PYE++ PLP + +++++K ++ FK K
Sbjct: 28 LVEAVAVTKNGRTIVAWHPDTPVPYENTQPLPKISEIQSSAVVKESALKTAMRAFKSKHP 87
Query: 69 EFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
E RQ+LM +T T KHRWFP + R +K P+ DR YL
Sbjct: 88 EVARQELMQLTHTTKHRWFP--RARDRKAKQTPM--DRPYL 124
>gi|195150753|ref|XP_002016315.1| GL11516 [Drosophila persimilis]
gi|198457546|ref|XP_001360706.2| GA11910 [Drosophila pseudoobscura pseudoobscura]
gi|194110162|gb|EDW32205.1| GL11516 [Drosophila persimilis]
gi|198136015|gb|EAL25281.2| GA11910 [Drosophila pseudoobscura pseudoobscura]
Length = 125
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 9 LTHKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKE 68
L +AIT +G T+V WHPE FPYEHS PLP + T++++K ++ FK K
Sbjct: 29 LVDGVAITKNGKTIVAWHPETAFPYEHSKPLPKVVEAQTSAVIKETALKTAMQGFKRKHP 88
Query: 69 EFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
E R +L +T T KHRWFP + R KK P+ DR YL
Sbjct: 89 EVARYELSKLTHTTKHRWFP--RARDKKAKKTPM--DRPYL 125
>gi|195430986|ref|XP_002063529.1| GK21960 [Drosophila willistoni]
gi|194159614|gb|EDW74515.1| GK21960 [Drosophila willistoni]
Length = 126
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 9 LTHKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKE 68
L + IT +G T+V WHPEQ PYE++ PLP ++ ++K +Q FK K
Sbjct: 30 LVEAVGITKNGKTIVAWHPEQEIPYENTKPLPEIVVSESSEVIKESALQSAMQSFKNKHP 89
Query: 69 EFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
E RQ+LM +T T KHRWFP + R KK P+ DR YL
Sbjct: 90 EVARQELMQLTHTTKHRWFP--RARDKKAKKTPM--DRPYL 126
>gi|194754459|ref|XP_001959512.1| GF12014 [Drosophila ananassae]
gi|190620810|gb|EDV36334.1| GF12014 [Drosophila ananassae]
Length = 124
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 9 LTHKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKE 68
L +A+T +G T+V WHP+ PFPYE + PLP + ++ ++K ++ F K
Sbjct: 28 LVEAVAVTKNGRTIVAWHPDTPFPYEKTQPLPKIAEVQSSDVIKESALKTAMQAFGRKHP 87
Query: 69 EFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
E RQ+LM +T T K+RWFP + R KK P+ DR YL
Sbjct: 88 EVARQELMKLTHTTKNRWFP--RARDKKAKKTPM--DRPYL 124
>gi|307188503|gb|EFN73240.1| 28S ribosomal protein S32, mitochondrial [Camponotus floridanus]
Length = 157
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 7/100 (7%)
Query: 10 THKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEE 69
+ + T D VVCWHPE+ FPYE+SLPLP E+ S+L + N +++ +VFK KK
Sbjct: 65 SEAVIFTEDDCMVVCWHPEKQFPYEYSLPLP--EENLPTSVLCIGN-KDVTDVFKKKKPY 121
Query: 70 FVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
V ++L IT+T KHRW+P R + + K PDR YL
Sbjct: 122 QVVEELSKITYTTKHRWYP----RSRDKKAKQTEPDRPYL 157
>gi|322789712|gb|EFZ14878.1| hypothetical protein SINV_03261 [Solenopsis invicta]
Length = 117
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%), Gaps = 7/100 (7%)
Query: 10 THKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEE 69
+ + D VVCWHPE+ FPYE+SLPLP E++ S+L + + ++I +VF+ KK
Sbjct: 25 SEAVIFMEDDRMVVCWHPEKSFPYEYSLPLP--EEKPDTSVLCIGD-KDIADVFRKKKPY 81
Query: 70 FVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
+ ++L IT+T KHRW+P R + + K PDR YL
Sbjct: 82 QIVEELAKITYTTKHRWYP----RSRDKKAKTTEPDRPYL 117
>gi|332021051|gb|EGI61438.1| 28S ribosomal protein L42, mitochondrial [Acromyrmex echinatior]
Length = 117
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 7/100 (7%)
Query: 10 THKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEE 69
+ + D VVCWHPE+ FPYE SLPLP E++ S+L++ N +E+ +F+ KKE
Sbjct: 25 SEAVIFMEDNRMVVCWHPEKIFPYECSLPLP--EEKPDISVLRIGN-KEVAEMFRKKKEY 81
Query: 70 FVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
V ++L IT+T KH+W+P R + + K PDR YL
Sbjct: 82 QVVEELAKITYTTKHKWYP----RSRDKKAKDTEPDRPYL 117
>gi|156538807|ref|XP_001607957.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like [Nasonia
vitripennis]
Length = 118
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
Query: 9 LTHKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKE 68
L ++ + + +VCWHPEQ FPYE S PLPV E + S+LK+ E+ +FK K
Sbjct: 24 LPPELVVFMNNEMIVCWHPEQTFPYECSKPLPVREPEP-ESVLKIGEA-EVKAMFKHPKA 81
Query: 69 EFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
+ + ++L IT+T KHRWFP K R KK +K PDR YL
Sbjct: 82 DLIPEELGRITYTCKHRWFP--KARSKK--YKNTEPDRPYL 118
>gi|442751915|gb|JAA68117.1| Putative mitochondrial 28s ribosomal protein s32 [Ixodes ricinus]
Length = 138
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 61/107 (57%), Gaps = 17/107 (15%)
Query: 10 THKIAITADGTTVVCWHPEQPFPYEHSLPLPVT--EQQSTNSILKVQ----NVQEIYNVF 63
+H I +T DG+T+VCWHPEQ FPYEH+ PLP E +S+LK+Q N+ Y
Sbjct: 42 SHMIVLTDDGSTIVCWHPEQEFPYEHTKPLPKVDPELNEGDSVLKLQVRLDNINRSY--- 98
Query: 64 KPKKEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIP-DREYL 109
+ E + L +T+T+KHRW+P + +Y P P DRE L
Sbjct: 99 --RNERLEIEALTKLTYTSKHRWYP-----KNNKYKDPNPPVDREGL 138
>gi|158294879|ref|XP_001688738.1| AGAP005852-PA [Anopheles gambiae str. PEST]
gi|157015770|gb|EDO63744.1| AGAP005852-PA [Anopheles gambiae str. PEST]
Length = 129
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 9 LTHKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKE 68
L K+A+ G V WHP+ FPYE S PL + + ++++ + K K
Sbjct: 33 LVQKVAVAEGGNCFVAWHPKPDFPYEFSRPLNAAGTEPSVNLVRDDIINASRGALKAKHP 92
Query: 69 EFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
EFVRQ+L +TFT KHRWFP + R K+ P+ DR YL
Sbjct: 93 EFVRQELSKLTFTTKHRWFP--RARDKRAKKTPM--DRPYL 129
>gi|427782545|gb|JAA56724.1| Putative mitochondrial 28s ribosomal protein s32 [Rhipicephalus
pulchellus]
Length = 137
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 63/102 (61%), Gaps = 10/102 (9%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVT--EQQSTNSILKVQ-NVQEIYNVFKPKKE 68
+I +T DG+T+VCWHPE+ FPYEH+ PLP + NS L+++ ++E +++ +
Sbjct: 42 RIVLTDDGSTIVCWHPEEEFPYEHTKPLPNIRPKLDEANSALRLEYRLEEAETIYRNDRL 101
Query: 69 EFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIP-DREYL 109
E + L +T+T+KHRW+P KK+Y P P +RE L
Sbjct: 102 EI--EALTKMTYTSKHRWYP----NNKKKYADPNPPIEREGL 137
>gi|307215208|gb|EFN89980.1| 28S ribosomal protein S32, mitochondrial [Harpegnathos saltator]
Length = 83
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 6/88 (6%)
Query: 22 VVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEFVRQDLMNITFT 81
VVCWHPE+ FPY++SLPL + NS+L++ + +++ +FK KKE V +L +T+T
Sbjct: 2 VVCWHPEKQFPYKYSLPLSEVVHED-NSVLRIGD-KDVAEMFKKKKEFMVIDELTKLTYT 59
Query: 82 NKHRWFPVRKMRQKKRYFKPLIPDREYL 109
KHRWFP R + + K PDR YL
Sbjct: 60 TKHRWFP----RSRDKKAKNTEPDRPYL 83
>gi|157109035|ref|XP_001650495.1| mitochondrial ribosomal protein, L42, putative [Aedes aegypti]
gi|108879147|gb|EAT43372.1| AAEL005190-PA [Aedes aegypti]
Length = 129
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 9 LTHKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKE 68
L ++ G V WHPE FPYE S P+ T +S S+++ + V + K K
Sbjct: 33 LVQRVNPAFGGKVFVAWHPEPTFPYECSKPIERTSVKSGPSLVRDELVLSGASQLKAKHP 92
Query: 69 EFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
E VR++L +TFT KHRWFP + R KK P+ DREYL
Sbjct: 93 EMVREELSKVTFTTKHRWFP--RARDKKAKKTPM--DREYL 129
>gi|346465991|gb|AEO32840.1| hypothetical protein [Amblyomma maculatum]
Length = 139
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 10/102 (9%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVT--EQQSTNSILKVQN-VQEIYNVFKPKKE 68
+I +T DG+T+V WHPE+ FPYEH+ PLP + NS LK+Q+ ++ I F+ ++
Sbjct: 44 RIVVTDDGSTIVMWHPEEEFPYEHTKPLPNIRPKLNEANSALKLQHRLENIELHFRNERL 103
Query: 69 EFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIP-DREYL 109
E ++L +T+T KHRW+ + K+Y P P DRE L
Sbjct: 104 EI--EELQKMTYTTKHRWY----LNNNKKYKDPNPPVDREGL 139
>gi|170030912|ref|XP_001843331.1| mitochondrial ribosomal protein L42 [Culex quinquefasciatus]
gi|167868811|gb|EDS32194.1| mitochondrial ribosomal protein L42 [Culex quinquefasciatus]
Length = 128
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 23 VCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEFVRQDLMNITFTN 82
+ WHP+ FPYEHS P+ +S ++++ + V + K K EFVR +L TFT
Sbjct: 46 LAWHPQPQFPYEHSKPIVRNSVESGSNLINDELVCSGASGLKDKHPEFVRDELAKATFTT 105
Query: 83 KHRWFPVRKMRQKKRYFKPLIPDREYL 109
KHRWFP + R KK P+ DRE+L
Sbjct: 106 KHRWFP--RARDKKAKRTPM--DREFL 128
>gi|410918937|ref|XP_003972941.1| PREDICTED: periodic tryptophan protein 1 homolog [Takifugu
rubripes]
Length = 579
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 11/96 (11%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPL----PVTE-QQSTNSILKVQNVQEIYNVFK-P 65
+I +T+DG+TVVC+HP PYE + P+ P+T +S + +LK +E+ + K P
Sbjct: 485 EIGVTSDGSTVVCYHPATDIPYEFTQPIERPDPLTNPPESHDQVLKAHLSKEVLSSNKGP 544
Query: 66 KKEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
EE L + FT KHRW+PV + Q++R P
Sbjct: 545 SIEE-----LSKMFFTTKHRWYPVGQYHQRRRKKDP 575
>gi|345326710|ref|XP_001510421.2| PREDICTED: 39S ribosomal protein L42, mitochondrial-like
[Ornithorhynchus anatinus]
Length = 147
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 13/93 (13%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLP-----VTEQQSTNSILKVQNVQEIYNVFKPK 66
++A+T+DG T+VC+HP FPY H+ PLP E ++ + ILK+Q V K +
Sbjct: 53 ELALTSDGRTIVCYHPTLDFPYSHTKPLPRPDPSKNEAETHDQILKMQ-----LEVEKKR 107
Query: 67 KE-EFVRQDLMNITFTNKHRWFPVRK--MRQKK 96
E E + L I +T KHRW+PV + MR+KK
Sbjct: 108 LEPEINIEQLSKIFYTTKHRWYPVGQYHMRRKK 140
>gi|312385523|gb|EFR30001.1| hypothetical protein AND_23512 [Anopheles darlingi]
Length = 113
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 20/101 (19%)
Query: 9 LTHKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKE 68
L +I + G V WHP+ FPYE S PL V + T ++
Sbjct: 33 LVQQIGVAEGGQVFVAWHPKPDFPYEFSKPLEVVVPEPTANL----------------HP 76
Query: 69 EFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDREYL 109
EFVR++L +TFT KHRWFP + R K+ P+ DR YL
Sbjct: 77 EFVREELSKLTFTCKHRWFP--RARDKRAKKTPM--DRPYL 113
>gi|118404172|ref|NP_001072400.1| mitochondrial ribosomal protein L42 [Xenopus (Silurana) tropicalis]
gi|111307956|gb|AAI21604.1| hypothetical protein MGC147221 [Xenopus (Silurana) tropicalis]
Length = 122
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPL----PVTEQQSTNSILKVQNVQEIYNVFKPKK 67
++A+T+DG T+VC+HP PYEH+ PL P+T T+ ++ + E+ +P K
Sbjct: 30 ELAMTSDGKTIVCYHPSVEVPYEHTKPLPQKDPLTSHTQTHELVLKARLNEVKAKPEPTK 89
Query: 68 EEFVRQDLMNITFTNKHRWFPVRKMRQKK 96
EE L + +T KH+W+PV + +++
Sbjct: 90 EE-----LSKMFYTTKHQWYPVGQYHRRR 113
>gi|47222044|emb|CAG12070.1| unnamed protein product [Tetraodon nigroviridis]
Length = 145
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 11/96 (11%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPL----PVTEQ-QSTNSILKVQNVQEIYNVFK-P 65
+I +T+DG TVVC HP PYE + PL P+ Q +S + +L+ QE+ K P
Sbjct: 51 EIGVTSDGRTVVCHHPAVDVPYELTQPLERPDPLRNQAESHDQVLRAHLSQEVPGSNKGP 110
Query: 66 KKEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
EE L + FT KHRW+PV + Q++R P
Sbjct: 111 SIEE-----LSKMFFTTKHRWYPVGQYHQRRRKKDP 141
>gi|449276249|gb|EMC84884.1| 28S ribosomal protein L42, mitochondrial, partial [Columba livia]
Length = 118
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTE-----QQSTNSILKVQ-NVQEIYNVFKP 65
++A+T+D T+VC+HP PYEH+ P+P + +++ + +LK + N +E+ N P
Sbjct: 24 ELAVTSDLKTIVCYHPSLEIPYEHTKPIPRPDPVNNTEETLDQVLKSRLNEKELKNSRGP 83
Query: 66 KKEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
EE L + +T KHRW+PV + +++R P
Sbjct: 84 TIEE-----LSKMFYTTKHRWYPVGQYHRRRRNPNP 114
>gi|387017108|gb|AFJ50672.1| 39S ribosomal protein L42, mitochondrial-like [Crotalus adamanteus]
Length = 140
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPL----PVTEQQSTNSILKVQNVQEIYNVFKPKK 67
++A+T+DG T+VC+HP PYEH+ P+ PVT ++ T+ + ++E V+ K
Sbjct: 47 ELAMTSDGKTIVCYHPSVDIPYEHTKPIPQLDPVTYKEETHEQVLKSKLEET-EVY---K 102
Query: 68 EEFVRQDLMNITFTNKHRWFPVRKMRQKKR 97
E + L + +T KHRW+PV + K++
Sbjct: 103 NEPTIETLSKMFYTTKHRWYPVGQYHTKRK 132
>gi|225706564|gb|ACO09128.1| Mitochondrial 28S ribosomal protein S32 [Osmerus mordax]
Length = 151
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLP-----VTEQQSTNSILKVQNVQEIYNVFKPK 66
+I +T+DG T+VC+HP PYE + P+P + ++ + +LK +E V + K
Sbjct: 57 EIGVTSDGQTIVCYHPSTDVPYEFTQPIPRPDPLINLAENHDQVLKAHLSRE---VLQNK 113
Query: 67 KEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
K + ++L + FT KHRW+PV + ++R P
Sbjct: 114 KAPTI-EELSKMFFTTKHRWYPVGQYHIRRRKGDP 147
>gi|13385564|ref|NP_080341.1| 39S ribosomal protein L42, mitochondrial precursor [Mus musculus]
gi|24212380|sp|Q9CPV3.1|RM42_MOUSE RecName: Full=39S ribosomal protein L42, mitochondrial;
Short=L42mt; Short=MRP-L42; AltName: Full=28S ribosomal
protein S32, mitochondrial; Short=MRP-S32; Short=S32mt;
AltName: Full=39S ribosomal protein L31, mitochondrial;
Short=L31mt; Short=MRP-L31; Flags: Precursor
gi|12832579|dbj|BAB22166.1| unnamed protein product [Mus musculus]
gi|12834094|dbj|BAB22785.1| unnamed protein product [Mus musculus]
gi|12851153|dbj|BAB28957.1| unnamed protein product [Mus musculus]
gi|19353348|gb|AAH24337.1| DNA segment, Chr 10, ERATO Doi 322, expressed [Mus musculus]
gi|148689660|gb|EDL21607.1| DNA segment, Chr 10, ERATO Doi 322, expressed, isoform CRA_c [Mus
musculus]
gi|148689661|gb|EDL21608.1| DNA segment, Chr 10, ERATO Doi 322, expressed, isoform CRA_c [Mus
musculus]
Length = 142
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 13 IAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEF-- 70
+A+TADG T+VC+HP PYEH+ P+P + N Q ++ V K K+ E
Sbjct: 48 LALTADGRTIVCYHPSVDIPYEHTKPIPQPDLLHNNEETHEQILKAKLEVRKSKQLEQGP 107
Query: 71 VRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
+ + L + +T KHRW+P + +++ P
Sbjct: 108 MIEQLSKVFYTTKHRWYPHGQYHNRRKKLNP 138
>gi|327272628|ref|XP_003221086.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like [Anolis
carolinensis]
Length = 146
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 54/91 (59%), Gaps = 9/91 (9%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTE-----QQSTNSILKVQNVQEIYNVFKPK 66
++A+T+DG T+VC+HP PYEH+ P+P + +++ + +LK + +E K K
Sbjct: 52 ELALTSDGKTIVCYHPTVDIPYEHTQPIPRGDPLDYKEETHDQVLKSRLEEE---ELKNK 108
Query: 67 KEEFVRQDLMNITFTNKHRWFPVRKMRQKKR 97
K + Q L + +T KHRW+PV + +++
Sbjct: 109 KGPTIEQ-LSKMFYTTKHRWYPVGQYHTRRK 138
>gi|301772816|ref|XP_002921826.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 142
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 17/99 (17%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTE-----QQSTNSILKVQNVQEIYNVFKPK 66
++A+T+DG T+VC+HP PYEH+ P+P + +++ + +LK + + K
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPDPVHNNEETHDQVLKTR--------LEEK 99
Query: 67 KEEF----VRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
E F V + L + FT KHRW+P + +++R P
Sbjct: 100 NEHFEQGPVIEQLSKMFFTTKHRWYPRGQYHRRRRKLDP 138
>gi|57096771|ref|XP_532651.1| PREDICTED: 39S ribosomal protein L42, mitochondrial isoform 1
[Canis lupus familiaris]
Length = 142
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEFV 71
++A+T+DG T+VC+HP PYEH+ P+P + N + ++ +K E
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPDPVHNNE----ETHDQVLKTRLEEKNEHF 103
Query: 72 RQDLM-----NITFTNKHRWFPVRKMRQKKRYFKP 101
Q LM + FT KHRW+P + +++R P
Sbjct: 104 EQGLMIEQLSKMFFTTKHRWYPRGQYHRRRRKLDP 138
>gi|209734362|gb|ACI68050.1| Mitochondrial 28S ribosomal protein S32, mitochondrial precursor
[Salmo salar]
Length = 144
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPL----PVTEQQST-NSILKVQNVQEIYNVFKPK 66
+I +T+DG T+VC+HP + PYEH+ P+ P+ T + +LK +E+
Sbjct: 50 EIGVTSDGKTIVCYHPSEDVPYEHTQPILRPDPLANPAETHDQVLKAHLGREVLQ----N 105
Query: 67 KEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
K+ ++L + T KHRW+PV + ++R P
Sbjct: 106 KQAPTIEELSKMFHTTKHRWYPVGQYHTRRRKRDP 140
>gi|350538001|ref|NP_001232314.1| putative mitochondrial ribosomal protein L42 precursor [Taeniopygia
guttata]
gi|197127269|gb|ACH43767.1| putative mitochondrial ribosomal protein L42 [Taeniopygia guttata]
Length = 146
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLP-----VTEQQSTNSILKVQ-NVQEIYNVFKP 65
++A+T+D T+VC+HP PYEH+ P+P ++++ + +LK + N +E+ N P
Sbjct: 52 ELAVTSDLKTIVCYHPSLEIPYEHTKPIPRPDPVNNKEENLDQVLKSRLNEKELKNSRGP 111
Query: 66 KKEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
EE L + +T KHRW+PV + ++++ P
Sbjct: 112 TIEE-----LSKMFYTTKHRWYPVGQYHRRRKNPNP 142
>gi|348580339|ref|XP_003475936.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like [Cavia
porcellus]
Length = 129
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 16/85 (18%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN-VFKPKKEEF 70
++A+T+DG T+VC+HP PYEH+ P+P + VQN++E ++ V K + EE
Sbjct: 50 ELALTSDGRTIVCYHPSVDIPYEHTRPIPQPD--------PVQNIEETHDQVLKTRLEEN 101
Query: 71 -------VRQDLMNITFTNKHRWFP 88
+ + L + FT KHRW+P
Sbjct: 102 ECLEQGPMIEQLSKMFFTTKHRWYP 126
>gi|260831836|ref|XP_002610864.1| hypothetical protein BRAFLDRAFT_229129 [Branchiostoma floridae]
gi|229296233|gb|EEN66874.1| hypothetical protein BRAFLDRAFT_229129 [Branchiostoma floridae]
Length = 139
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 56/90 (62%), Gaps = 9/90 (10%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNV-FKPKKEEF 70
++A+T+DG T+VC+HP +PFPYEH+ PLP + S L+V ++I + FK + +E
Sbjct: 36 ELAVTSDGRTIVCYHPSKPFPYEHTKPLPPLDHMS----LEVYYQEDILKLTFKEQTKEH 91
Query: 71 V----RQDLMNITFTNKHRWFPVRKMRQKK 96
+ + L + F ++++W+ K+R +K
Sbjct: 92 LSGPDNKKLEQMFFIHENKWWGSSKVRLRK 121
>gi|225715872|gb|ACO13782.1| Mitochondrial 28S ribosomal protein S32, mitochondrial precursor
[Esox lucius]
Length = 144
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 9 LTHKIAITADGTTVVCWHPEQPFPYEHSLPLP-----VTEQQSTNSILKVQNVQEIYNVF 63
T +I +T+DG T+VC+HP + PYE + P+P ++ N +LK +E V
Sbjct: 47 CTVEIGVTSDGKTIVCYHPTEDVPYELTQPIPRPDPLTNPSETHNQVLKAHLGRE---VL 103
Query: 64 KPKKEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
K K+ + ++L + T KHRW+P + ++R P
Sbjct: 104 KNKQAPTI-EELSKMFHTTKHRWYPAGQYHMRRRKTNP 140
>gi|395820076|ref|XP_003783401.1| PREDICTED: 39S ribosomal protein L42, mitochondrial [Otolemur
garnettii]
Length = 142
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEFV 71
++A+T+DG T+VC+HP PYEH+ P+P+ + N + ++ +K E +
Sbjct: 48 ELALTSDGRTIVCYHPSLDIPYEHTKPIPLPDPVGNNE----ETHDQVLKTRLAEKSERL 103
Query: 72 RQD-----LMNITFTNKHRWFPVRKMRQKKRYFKP 101
Q L + FT KHRW+P + +++ P
Sbjct: 104 EQGPMIEQLSKMFFTTKHRWYPRGQYHTRRKKLNP 138
>gi|68366320|ref|XP_696647.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like [Danio
rerio]
Length = 144
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN--VFKPKKEE 69
+IA+T+DG T+VC+HP PYE + P+ + S ++ Q +++ V KK
Sbjct: 50 EIAVTSDGNTIVCFHPADDVPYELTQPIVRPDAISGHAETHEQVLKDRLGKAVLADKKAP 109
Query: 70 FVRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
+ ++L + +T KHRW+PV + ++R P
Sbjct: 110 TI-EELSKMFYTTKHRWYPVGQFHNRRRKLNP 140
>gi|208610032|ref|NP_001124973.1| 39S ribosomal protein L42, mitochondrial [Pongo abelii]
gi|55726546|emb|CAH90040.1| hypothetical protein [Pongo abelii]
Length = 113
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 56/95 (58%), Gaps = 9/95 (9%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTE-----QQSTNSILKVQNVQEIYNVFKPK 66
++A+T+DG T+VC+HP PYEH+ P+P + +++ + +LK + +++ ++
Sbjct: 19 ELAVTSDGRTIVCYHPSVDIPYEHTKPIPRPDPVHNNEETHDQVLKTRLEEKVEHL---- 74
Query: 67 KEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
+E + + L + FT KHRW+P + + ++ P
Sbjct: 75 EEGPMIEQLSKMFFTTKHRWYPHGRYHRCRKNLNP 109
>gi|348514985|ref|XP_003445020.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like
[Oreochromis niloticus]
Length = 144
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPL----PVTEQQST-NSILKVQNVQEIYNVFKPK 66
+I +T+DG T+VC+HP PYE + P+ P+ Q T + +LK +E+ P
Sbjct: 51 EIGVTSDGKTIVCYHPTADIPYELTQPIERPDPMANQVETHDQVLKAHLSKEVLKDNGPT 110
Query: 67 KEEFVRQDLMNITFTNKHRWFPVRKMRQKK 96
EE L + FT KHR++P+ + R+++
Sbjct: 111 IEE-----LSKMFFTTKHRFYPIGQYRRRR 135
>gi|354488501|ref|XP_003506407.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like
[Cricetulus griseus]
Length = 144
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEF- 70
++A+T+DG T+VC+HP PYEH+ P+P + N Q ++ + + E+
Sbjct: 50 ELALTSDGRTIVCYHPSVDIPYEHTKPIPQPDILHNNEETHEQVLKAKLGIKSDQLEQGP 109
Query: 71 VRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
+ + L + FT KHRW+P + ++++ P
Sbjct: 110 MIEQLSKVFFTTKHRWYPHGQYHRRRKKLNP 140
>gi|344250654|gb|EGW06758.1| 28S ribosomal protein L42, mitochondrial [Cricetulus griseus]
Length = 141
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEF- 70
++A+T+DG T+VC+HP PYEH+ P+P + N Q ++ + + E+
Sbjct: 47 ELALTSDGRTIVCYHPSVDIPYEHTKPIPQPDILHNNEETHEQVLKAKLGIKSDQLEQGP 106
Query: 71 VRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
+ + L + FT KHRW+P + ++++ P
Sbjct: 107 MIEQLSKVFFTTKHRWYPHGQYHRRRKKLNP 137
>gi|441626907|ref|XP_004089198.1| PREDICTED: 39S ribosomal protein L42, mitochondrial [Nomascus
leucogenys]
Length = 142
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN-VFKPKKEEF 70
++A+T+DG T+VC+HP PYEH+ P+P + V N +E ++ V K + EE
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPD--------PVHNNEETHDQVLKTRLEEK 99
Query: 71 VR--------QDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
V + L + FT KHRW+P + + ++ P
Sbjct: 100 VEHLEEGPMIEQLSKMFFTTKHRWYPHGRYHRCRKNLNP 138
>gi|119617893|gb|EAW97487.1| mitochondrial ribosomal protein L42, isoform CRA_e [Homo sapiens]
Length = 142
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN-VFKPKKEEF 70
++A+T+DG T+VC+HP PYEH+ P+P + V N +E ++ V K + EE
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPD--------PVHNNEETHDQVLKTRLEEK 99
Query: 71 VR--------QDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
V + L + FT KHRW+P + + ++ P
Sbjct: 100 VEHLEEGPMIEQLSKMFFTTKHRWYPHGRYHRCRKNLNP 138
>gi|426373688|ref|XP_004053725.1| PREDICTED: 39S ribosomal protein L42, mitochondrial [Gorilla
gorilla gorilla]
Length = 142
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN-VFKPKKEEF 70
++A+T+DG T+VC+HP PYEH+ P+P + V N +E ++ V K + EE
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPD--------PVHNNEETHDQVLKTRLEEK 99
Query: 71 VR--------QDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
V + L + FT KHRW+P + + ++ P
Sbjct: 100 VEHLEEGPMIEQLSKMFFTTKHRWYPHGRYHRCRKNLNP 138
>gi|114646238|ref|XP_001139490.1| PREDICTED: 39S ribosomal protein L42, mitochondrial isoform 4 [Pan
troglodytes]
gi|397491995|ref|XP_003816920.1| PREDICTED: 39S ribosomal protein L42, mitochondrial isoform 2 [Pan
paniscus]
Length = 142
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN-VFKPKKEEF 70
++A+T+DG T+VC+HP PYEH+ P+P + V N +E ++ V K + EE
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPD--------PVHNNEETHDQVLKTRLEEK 99
Query: 71 VR--------QDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
V + L + FT KHRW+P + + ++ P
Sbjct: 100 VEHLEEGPMIEQLSKMFFTTKHRWYPHGRYHRCRKNLNP 138
>gi|207079875|ref|NP_001128899.1| 39S ribosomal protein L42, mitochondrial precursor [Pongo abelii]
gi|75041001|sp|Q5R4S3.1|RM42_PONAB RecName: Full=39S ribosomal protein L42, mitochondrial;
Short=L42mt; Short=MRP-L42; AltName: Full=28S ribosomal
protein S32, mitochondrial; Short=MRP-S32; Short=S32mt;
Flags: Precursor
gi|55733118|emb|CAH93243.1| hypothetical protein [Pongo abelii]
Length = 139
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 17/92 (18%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN-VFKPKKEEF 70
++A+T+DG T+VC+HP PYEH+ P+P + V N +E ++ V K + EE
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPD--------PVHNNEETHDQVLKTRLEEK 99
Query: 71 VR--------QDLMNITFTNKHRWFPVRKMRQ 94
V + L + FT KHRW+P + R+
Sbjct: 100 VEHLEEGPMIEQLSKMFFTTKHRWYPHGRCRK 131
>gi|114646230|ref|XP_509266.2| PREDICTED: 39S ribosomal protein L42, mitochondrial isoform 6 [Pan
troglodytes]
gi|397491993|ref|XP_003816919.1| PREDICTED: 39S ribosomal protein L42, mitochondrial isoform 1 [Pan
paniscus]
gi|410220238|gb|JAA07338.1| mitochondrial ribosomal protein L42 [Pan troglodytes]
gi|410249284|gb|JAA12609.1| mitochondrial ribosomal protein L42 [Pan troglodytes]
gi|410291224|gb|JAA24212.1| mitochondrial ribosomal protein L42 [Pan troglodytes]
gi|410330311|gb|JAA34102.1| mitochondrial ribosomal protein L42 [Pan troglodytes]
Length = 142
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN-VFKPKKEEF 70
++A+T+DG T+VC+HP PYEH+ P+P + V N +E ++ V K + EE
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPD--------PVHNNEETHDQVLKTRLEEK 99
Query: 71 VR--------QDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
V + L + FT KHRW+P + + ++ P
Sbjct: 100 VEHLEEGPMIEQLSKMFFTTKHRWYPHGRYHRCRKNLNP 138
>gi|7662637|ref|NP_054769.1| 39S ribosomal protein L42, mitochondrial precursor [Homo sapiens]
gi|26667171|ref|NP_751917.1| 39S ribosomal protein L42, mitochondrial precursor [Homo sapiens]
gi|332221129|ref|XP_003259715.1| PREDICTED: 39S ribosomal protein L42, mitochondrial [Nomascus
leucogenys]
gi|426373686|ref|XP_004053724.1| PREDICTED: 39S ribosomal protein L42, mitochondrial [Gorilla
gorilla gorilla]
gi|441626904|ref|XP_004089197.1| PREDICTED: 39S ribosomal protein L42, mitochondrial [Nomascus
leucogenys]
gi|24212391|sp|Q9Y6G3.1|RM42_HUMAN RecName: Full=39S ribosomal protein L42, mitochondrial;
Short=L42mt; Short=MRP-L42; AltName: Full=28S ribosomal
protein S32, mitochondrial; Short=MRP-S32; Short=S32mt;
AltName: Full=39S ribosomal protein L31, mitochondrial;
Short=L31mt; Short=MRP-L31; Flags: Precursor
gi|7259478|gb|AAF43784.1|AF135160_1 unknown [Homo sapiens]
gi|5531835|gb|AAD44492.1| PTD007 [Homo sapiens]
gi|7020263|dbj|BAA91054.1| unnamed protein product [Homo sapiens]
gi|12052842|emb|CAB66594.1| hypothetical protein [Homo sapiens]
gi|25955475|gb|AAH40240.1| Mitochondrial ribosomal protein L42 [Homo sapiens]
gi|49065416|emb|CAG38526.1| MRPL42 [Homo sapiens]
gi|119617890|gb|EAW97484.1| mitochondrial ribosomal protein L42, isoform CRA_b [Homo sapiens]
gi|119617894|gb|EAW97488.1| mitochondrial ribosomal protein L42, isoform CRA_b [Homo sapiens]
gi|119617895|gb|EAW97489.1| mitochondrial ribosomal protein L42, isoform CRA_b [Homo sapiens]
gi|190691543|gb|ACE87546.1| mitochondrial ribosomal protein L42 protein [synthetic construct]
gi|261861450|dbj|BAI47247.1| mitochondrial ribosomal protein L42 [synthetic construct]
Length = 142
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN-VFKPKKEEF 70
++A+T+DG T+VC+HP PYEH+ P+P + V N +E ++ V K + EE
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPD--------PVHNNEETHDQVLKTRLEEK 99
Query: 71 VR--------QDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
V + L + FT KHRW+P + + ++ P
Sbjct: 100 VEHLEEGPMIEQLSKMFFTTKHRWYPHGRYHRCRKNLNP 138
>gi|402887234|ref|XP_003907003.1| PREDICTED: 39S ribosomal protein L42, mitochondrial [Papio anubis]
Length = 114
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN-VFKPKKEEF 70
++A+T+DG T+VC+HP PYEH+ P+P + V N +E ++ V K + EE
Sbjct: 20 ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPD--------PVHNNEETHDQVLKTRLEEK 71
Query: 71 VR--------QDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
V + L + FT KHRW+P + +++ P
Sbjct: 72 VEHLEEGPMIEKLSKMFFTTKHRWYPHGQYHRRRMNLNP 110
>gi|296212582|ref|XP_002752897.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like isoform 1
[Callithrix jacchus]
Length = 142
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTE-----QQSTNSILKVQNVQEIYNVFKPK 66
++A+T+DG T+VC+HP PYEH+ P+P + +++ + ILK + +++ +P
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPDPVHNNEETHDQILKTRLEEKV----EPL 103
Query: 67 KEEFVRQDLMNITFTNKHRWFPVRKMRQKKR 97
++ + + L + FT KHRW+P + + ++
Sbjct: 104 EQGPMIEQLSKMFFTTKHRWYPYGRYHRCRK 134
>gi|351699704|gb|EHB02623.1| 28S ribosomal protein L42, mitochondrial [Heterocephalus glaber]
Length = 142
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 17/86 (19%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN-VFKPKKEEF 70
++A+T+DG T+VC+HP PYEH+ P+P + V N++E ++ V K + EE
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHTRPIPQPD--------PVHNIEETHDHVLKTRLEEK 99
Query: 71 VR--------QDLMNITFTNKHRWFP 88
+ L + FT KHRW+P
Sbjct: 100 SECLEQGPMIEQLSKMFFTTKHRWYP 125
>gi|431910589|gb|ELK13657.1| 28S ribosomal protein L42, mitochondrial [Pteropus alecto]
Length = 122
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 17/99 (17%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTE-----QQSTNSILKVQNVQEIYNVFKPK 66
++A+T+DG T+VC+HP PYE++ P+P + +++ + +LK + + K
Sbjct: 28 ELALTSDGRTIVCYHPSVDIPYEYTKPIPQLDPVHNHEETQDQVLKTR--------LEEK 79
Query: 67 KEEF----VRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
E F ++Q L + FT KH+W+P + + ++ KP
Sbjct: 80 DEHFEQGPMKQQLSKMFFTTKHQWYPRGQYHRCRKKLKP 118
>gi|355564573|gb|EHH21073.1| 39S ribosomal protein L42, mitochondrial [Macaca mulatta]
gi|355786412|gb|EHH66595.1| 39S ribosomal protein L42, mitochondrial [Macaca fascicularis]
gi|383414567|gb|AFH30497.1| 39S ribosomal protein L42, mitochondrial precursor [Macaca mulatta]
gi|384944098|gb|AFI35654.1| 39S ribosomal protein L42, mitochondrial precursor [Macaca mulatta]
Length = 142
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN-VFKPKKEEF 70
++A+T+DG T+VC+HP PYEH+ P+P + V N +E ++ V K + EE
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHTKPVPRPD--------PVHNNEETHDQVLKTRLEEK 99
Query: 71 VR--------QDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
V + L + FT KHRW+P + +++ P
Sbjct: 100 VEHLEEGPMIEKLSKMFFTTKHRWYPHGQYHRRRTNLNP 138
>gi|326911671|ref|XP_003202180.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like [Meleagris
gallopavo]
Length = 146
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 55/96 (57%), Gaps = 11/96 (11%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLP-----VTEQQSTNSILKVQ-NVQEIYNVFKP 65
++A+T+D T+VC+HP PYEH+ P+P ++++ + +LK + N +E+ N
Sbjct: 52 ELALTSDSKTIVCYHPSLEIPYEHTQPVPRPDPVNNKEETLDQVLKSRLNEEELKN---- 107
Query: 66 KKEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
++L + +T KHRW+PV + ++++ P
Sbjct: 108 -DRGLTIEELSKMFYTTKHRWYPVGQYHRRRKNPNP 142
>gi|297263252|ref|XP_001106011.2| PREDICTED: 39S ribosomal protein L42, mitochondrial-like [Macaca
mulatta]
Length = 142
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 17/98 (17%)
Query: 13 IAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN-VFKPKKEEFV 71
+A+T+DG T+VC+HP PYEH+ P+P + V N +E ++ V K + EE V
Sbjct: 49 LALTSDGRTIVCYHPSVDIPYEHTKPVPRPD--------PVHNNEETHDQVLKTRLEEKV 100
Query: 72 R--------QDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
+ L + FT KHRW+P + +++ P
Sbjct: 101 EHLEEGPMIEKLSKMFFTTKHRWYPHGQYHRRRTNLNP 138
>gi|338721146|ref|XP_003364315.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like [Equus
caballus]
Length = 142
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN-VFKPKKEEF 70
++A+T+DG T+VC+HP PYEH+ P+P + V N +E ++ V K + EE
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPD--------PVHNHEETHDQVLKTRLEEK 99
Query: 71 VR--------QDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
+ L + FT KHRW+P + ++++ P
Sbjct: 100 SEHLEQGPMIEQLSKMFFTTKHRWYPRGQYHRRRKKLDP 138
>gi|221220898|gb|ACM09110.1| Mitochondrial 28S ribosomal protein S32, mitochondrial precursor
[Salmo salar]
gi|221221238|gb|ACM09280.1| Mitochondrial 28S ribosomal protein S32, mitochondrial precursor
[Salmo salar]
Length = 146
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPL----PVTEQQST-NSILKVQNVQEIYNVFKPK 66
+I +T+DG T+VC+HP + PYE + P+ P+T T + +LK +E+
Sbjct: 52 EIGVTSDGKTIVCYHPSEDVPYELTQPILRPDPLTNPAETHDQVLKAHLGREVLQ----N 107
Query: 67 KEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
K+ ++L + T KHRW+PV + ++R P
Sbjct: 108 KQAPTIEELSKMFHTTKHRWYPVGQYHTRRRKRDP 142
>gi|119617891|gb|EAW97485.1| mitochondrial ribosomal protein L42, isoform CRA_c [Homo sapiens]
Length = 138
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 56/95 (58%), Gaps = 9/95 (9%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTE-----QQSTNSILKVQNVQEIYNVFKPK 66
++A+T+DG T+VC+HP PYEH+ P+P + +++ + +LK + +++ ++
Sbjct: 44 ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPDPVHNNEETHDQVLKTRLEEKVEHL---- 99
Query: 67 KEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
+E + + L + FT KHRW+P + + ++ P
Sbjct: 100 EEGPMIEQLSKMFFTTKHRWYPHGRYHRCRKNLNP 134
>gi|83035113|ref|NP_001032711.1| 39S ribosomal protein L42, mitochondrial precursor [Bos taurus]
gi|93186164|sp|P82927.2|RM42_BOVIN RecName: Full=39S ribosomal protein L42, mitochondrial;
Short=L42mt; Short=MRP-L42; AltName: Full=28S ribosomal
protein S32, mitochondrial; Short=MRP-S32; Short=S32mt;
Flags: Precursor
gi|81673128|gb|AAI09671.1| Mitochondrial ribosomal protein L42 [Bos taurus]
gi|296487950|tpg|DAA30063.1| TPA: 28S ribosomal protein L42, mitochondrial precursor [Bos
taurus]
Length = 142
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPL----PVTEQQSTNSILKVQNVQEIYNVFKPKK 67
++A+T+D T+VC+HP PYEH+ P+ PV + T+ ++ ++E K
Sbjct: 48 ELALTSDARTIVCYHPSVDIPYEHTKPIPRPDPVHNNEETHDLVLKTRLEE--------K 99
Query: 68 EEFVRQD-----LMNITFTNKHRWFPVRKMRQKKRYFKP 101
E + Q L + FT KHRW+P + +++R P
Sbjct: 100 SEHLEQGPMIEQLSKMFFTTKHRWYPRGQYHRRRRKLNP 138
>gi|355704363|gb|AES02202.1| mitochondrial ribosomal protein L42 [Mustela putorius furo]
Length = 126
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 17/99 (17%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN-VFKPK---K 67
++A+T+DG T+VC+HP PYEH+ P+P + + N +E ++ V K + K
Sbjct: 33 ELALTSDGRTIVCYHPSVDIPYEHTQPIPRPD--------PLHNNEETHDLVLKTRLEGK 84
Query: 68 EEFVRQD-----LMNITFTNKHRWFPVRKMRQKKRYFKP 101
E + Q L + FT KHRW+P + +++R P
Sbjct: 85 NEHLEQGPMIEQLSKMFFTTKHRWYPRGQYHRRRRKLDP 123
>gi|426224288|ref|XP_004006304.1| PREDICTED: 39S ribosomal protein L42, mitochondrial isoform 1 [Ovis
aries]
gi|426224290|ref|XP_004006305.1| PREDICTED: 39S ribosomal protein L42, mitochondrial isoform 2 [Ovis
aries]
Length = 142
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPL----PVTEQQSTNSILKVQNVQEIYNVFKPKK 67
++A+T+D T+VC+HP PYEH+ P+ PV + T+ ++ ++E K
Sbjct: 48 ELALTSDARTIVCYHPSVDIPYEHTKPIPRPDPVHNNEETHDLVLKTRLEE--------K 99
Query: 68 EEFVRQD-----LMNITFTNKHRWFPVRKMRQKKRYFKP 101
E + Q L + FT KHRW+P + +++R P
Sbjct: 100 SEHLEQGPMIEQLSKMFFTTKHRWYPRGQYHRRRRKLNP 138
>gi|350584680|ref|XP_003126771.3| PREDICTED: 39S ribosomal protein L42, mitochondrial-like isoform 1,
partial [Sus scrofa]
Length = 170
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 17/86 (19%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN-VFKPKKEEF 70
++A+T+DG T+VC+HP PYEH+ P+P + V N++E ++ V K + EE
Sbjct: 91 ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPD--------PVHNIEETHDLVLKTRLEEK 142
Query: 71 VR--------QDLMNITFTNKHRWFP 88
+ L + FT KHRW+P
Sbjct: 143 GEHLEQGPMIEQLSKMFFTTKHRWYP 168
>gi|390469252|ref|XP_003734073.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like
[Callithrix jacchus]
Length = 141
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 54/90 (60%), Gaps = 8/90 (8%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPL----PVTEQQSTNSILKVQNVQEIYNVFKPKK 67
K+A+T+DG T+VC+HP PYEH+ P+ PV +++ + ILK++ +++ +P +
Sbjct: 48 KLALTSDGRTIVCYHPSVDIPYEHTKPIPWPDPVHNEETHHQILKMRLEEKV----EPLE 103
Query: 68 EEFVRQDLMNITFTNKHRWFPVRKMRQKKR 97
+ + + L + FT KH W P + + ++
Sbjct: 104 QGPMVEQLSKMFFTTKHCWCPYGRYHRCRK 133
>gi|148699992|gb|EDL31939.1| mCG5991 [Mus musculus]
Length = 142
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 13 IAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNV--FKPKKEEF 70
+A+TADG T+VC+HP PYEHS P P + N Q + V KP ++
Sbjct: 48 LALTADGRTIVCYHPSVDIPYEHSKPTPQPDLLHNNEETHEQIPKAKLEVRKRKPLEQGP 107
Query: 71 VRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
+ + L + +T KHRW+P + +++ P
Sbjct: 108 MLEQLSKVFYTTKHRWYPHGQYHSRRKKQNP 138
>gi|417396169|gb|JAA45118.1| Putative 39s ribosomal protein l42 [Desmodus rotundus]
Length = 142
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 17/99 (17%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN-VFKPK---K 67
++A+T+DG T+VC+HP PYEH+ P+P + V N +E + V K + K
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPD--------PVHNYEETLDQVLKTRLEEK 99
Query: 68 EEFVRQD-----LMNITFTNKHRWFPVRKMRQKKRYFKP 101
EE +++ L + FT KHRW+P + +++ P
Sbjct: 100 EEHLQEGPMIEQLSKMFFTTKHRWYPRGQYHTRRKKLNP 138
>gi|7106798|gb|AAF36124.1|AF151038_1 HSPC204 [Homo sapiens]
Length = 136
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 17/86 (19%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN-VFKPKKEEF 70
++A+T+DG T+VC+HP PYEH+ P+P + V N +E ++ V K + EE
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPD--------PVHNNEETHDQVLKTRLEEK 99
Query: 71 VR--------QDLMNITFTNKHRWFP 88
V + L + FT KHRW+P
Sbjct: 100 VEHLEEGPMIEQLSKMFFTTKHRWYP 125
>gi|149067126|gb|EDM16859.1| rCG49024, isoform CRA_c [Rattus norvegicus]
Length = 114
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEF- 70
++A+T+DG T+VC+HP PYEH+ P+P + N Q ++ + E+
Sbjct: 20 ELALTSDGRTIVCYHPSVDVPYEHTQPIPHPDLLHNNEETHEQILRTKLEGNRKHLEQGP 79
Query: 71 VRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
+ + L + FT KHRW+P + ++++ P
Sbjct: 80 MIEQLSKVFFTTKHRWYPHGQYHRRRKKLNP 110
>gi|281352836|gb|EFB28420.1| hypothetical protein PANDA_010748 [Ailuropoda melanoleuca]
Length = 82
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 17/86 (19%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTE-----QQSTNSILKVQNVQEIYNVFKPK 66
++A+T+DG T+VC+HP PYEH+ P+P + +++ + +LK + + K
Sbjct: 2 ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPDPVHNNEETHDQVLKTR--------LEEK 53
Query: 67 KEEF----VRQDLMNITFTNKHRWFP 88
E F V + L + FT KHRW+P
Sbjct: 54 NEHFEQGPVIEQLSKMFFTTKHRWYP 79
>gi|157817284|ref|NP_001100252.1| 28S ribosomal protein L42, mitochondrial [Rattus norvegicus]
gi|149067124|gb|EDM16857.1| rCG49024, isoform CRA_a [Rattus norvegicus]
gi|197246785|gb|AAI68747.1| Mitochondrial ribosomal protein L42 [Rattus norvegicus]
Length = 141
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEF- 70
++A+T+DG T+VC+HP PYEH+ P+P + N Q ++ + E+
Sbjct: 47 ELALTSDGRTIVCYHPSVDVPYEHTQPIPHPDLLHNNEETHEQILRTKLEGNRKHLEQGP 106
Query: 71 VRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
+ + L + FT KHRW+P + ++++ P
Sbjct: 107 MIEQLSKVFFTTKHRWYPHGQYHRRRKKLNP 137
>gi|403264531|ref|XP_003924531.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like [Saimiri
boliviensis boliviensis]
Length = 118
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTE-----QQSTNSILKVQNVQEIYNVFKPK 66
K+A+T+DG T+VC+HP YEH+ P+P + +++ N ILK + +++ +P
Sbjct: 24 KLALTSDGRTIVCYHPSVDIAYEHTKPIPWPDPVHNNEETHNQILKTRLEEKV----EPL 79
Query: 67 KEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
++E + + L + F KH W+P + + + P
Sbjct: 80 EQEPMVEQLSKMFFMTKHCWYPYGRYHRCHKNLNP 114
>gi|344267616|ref|XP_003405662.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like [Loxodonta
africana]
Length = 128
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 9/82 (10%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLP-----VTEQQSTNSILKVQNVQEIYNVFKPK 66
++A+T+DG T+VC+HP PYEH+ P+P ++ + +LK + E+ + +P
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPDPVYNSDETHDQVLKTR--LEVKD--EPL 103
Query: 67 KEEFVRQDLMNITFTNKHRWFP 88
++ + + L + FT KHRW+P
Sbjct: 104 EQGPMIEQLSKMFFTTKHRWYP 125
>gi|395816598|ref|XP_003781785.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like isoform 1
[Otolemur garnettii]
Length = 142
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEFV 71
++A+T+DG T+VC+HP PYE + P+P+ + N + + Q + N K E
Sbjct: 48 ELALTSDGRTIVCYHPSLDIPYEPTKPIPLPDPVGNN---EETHDQVLKNRLAEKSERLE 104
Query: 72 R----QDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
+ + L + FT KHRW+P + +++ P
Sbjct: 105 QGPMIEQLSKMFFTTKHRWYPRGQYHTRRKKLNP 138
>gi|225704196|gb|ACO07944.1| Mitochondrial 28S ribosomal protein S32 [Oncorhynchus mykiss]
Length = 146
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPL----PVTEQQST-NSILKVQNVQEIYNVFKPK 66
+I +T+DG T+ C+HP + PYE + P+ P+T T + +LK +E+
Sbjct: 52 EIGVTSDGKTIGCYHPSEDVPYEFTQPILRPDPLTNPAETHDQVLKAHLGREVLQ----N 107
Query: 67 KEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
K+ ++L + T KHRW+PV + ++R P
Sbjct: 108 KQAPTIEELSKMFHTTKHRWYPVGQYHTRRRKRDP 142
>gi|291389727|ref|XP_002711324.1| PREDICTED: mitochondrial ribosomal protein L42 [Oryctolagus
cuniculus]
Length = 219
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 19/87 (21%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLP-----VTEQQSTNSILKVQNVQEIYNVFKPK 66
++A+T+DG T+VC+HP PYEH+ P+P + +++ + +LK + ++E
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHTKPIPRPDPVLNNEETHDQVLKTR-LEE-------- 98
Query: 67 KEEFVRQD-----LMNITFTNKHRWFP 88
K E + Q L + FT KHRW+P
Sbjct: 99 KSEHLEQGPMIEQLSKMFFTTKHRWYP 125
>gi|392332776|ref|XP_003752690.1| PREDICTED: 28S ribosomal protein L42, mitochondrial-like [Rattus
norvegicus]
gi|392352713|ref|XP_003751291.1| PREDICTED: 28S ribosomal protein L42, mitochondrial-like [Rattus
norvegicus]
gi|124053375|sp|P0C2B9.1|RM42_RAT RecName: Full=28S ribosomal protein L42, mitochondrial;
Short=L42mt; Short=MRP-L42; AltName: Full=28S ribosomal
protein S32, mitochondrial; Short=MRP-S32; Short=S32mt;
Flags: Precursor
Length = 141
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQ-EIYNVFKPKKEEF 70
++A+T+DG T+VC+HP PYEH+ P+P + N Q ++ ++ K ++
Sbjct: 47 ELALTSDGRTIVCYHPSVDVPYEHTKPIPHPDLLHNNEETHEQILRTKLEGNHKHLEQGP 106
Query: 71 VRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
+ + L + FT KHRW+P + + ++ P
Sbjct: 107 MIEQLSKVFFTTKHRWYPHGQYHRCRKKLNP 137
>gi|209736982|gb|ACI69360.1| Mitochondrial 28S ribosomal protein S32, mitochondrial precursor
[Salmo salar]
Length = 144
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPL----PVTEQQST-NSILKVQNVQEIYNVFKPK 66
+I +T+DG T+VC+HP + PYE++ P+ P+ T + +LK +++
Sbjct: 50 EIGVTSDGKTIVCYHPSEDVPYENTQPILRPDPLANPAETHDQVLKAHLGRKVLQ----N 105
Query: 67 KEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
K+ ++L + T KHRW+PV + ++R P
Sbjct: 106 KQAPTIEELSKMFHTTKHRWYPVGQYHTRRRKRDP 140
>gi|363727690|ref|XP_416141.3| PREDICTED: 39S ribosomal protein L42, mitochondrial [Gallus gallus]
Length = 146
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLP-----VTEQQSTNSILKVQ-NVQEIYNVFKP 65
++A+T+D T+VC+HP PYEH+ P+P ++++ + +LK + N +++ N
Sbjct: 52 ELALTSDSKTIVCYHPSLEIPYEHTKPVPRPDPVNNKEETLDQVLKSRLNEEKLKN---- 107
Query: 66 KKEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
++L + +T KHRW+P+ + +++++ P
Sbjct: 108 -DRGLTIEELSKMFYTTKHRWYPMGQYQRRRKNPNP 142
>gi|432942772|ref|XP_004083065.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like [Oryzias
latipes]
Length = 145
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 11/99 (11%)
Query: 13 IAITADGTTVVCWHPEQPFPYEHSLPL----PVTEQQST-NSILKVQNVQEIYNVFKPKK 67
I +T+DG T+VC+HP PYE + P+ P+T T + +LK +E+ P
Sbjct: 53 IGVTSDGKTIVCYHPAVDIPYEFTQPVDRPDPLTNSIETHDQVLKAHLSKEVLKDKGPTI 112
Query: 68 EEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDR 106
EE L + FT KHR++PV + ++R K L DR
Sbjct: 113 EE-----LSKMFFTTKHRFYPVGQY-HRRRINKNLPKDR 145
>gi|403305848|ref|XP_003943464.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like [Saimiri
boliviensis boliviensis]
gi|403305850|ref|XP_003943465.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like [Saimiri
boliviensis boliviensis]
Length = 142
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTE-----QQSTNSILKVQNVQEIYNVFKPK 66
++A+T+DG T+VC+HP PYEH+ P+P + +++ + ILK + +++ +P
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHTKPIPGPDPVHNNEETHDQILKNRLEEKV----EPL 103
Query: 67 KEEFVRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
++ + + L T KHRW+P + + ++ P
Sbjct: 104 EQGPMVEQLSKTFLTTKHRWYPYGRYHRCRKNPNP 138
>gi|392873662|gb|AFM85663.1| 39S ribosomal protein L42, mitochondrial-like protein
[Callorhinchus milii]
gi|392877176|gb|AFM87420.1| 39S ribosomal protein L42, mitochondrial-like protein
[Callorhinchus milii]
Length = 144
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 17/93 (18%)
Query: 13 IAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN-VFKPKKE-EF 70
+A+T+D T+VC+HP YEH+ P+P + V+N +E + V K + E E
Sbjct: 51 LALTSDRKTIVCYHPSVDVLYEHTKPIP--------RLSPVENKEETHEQVLKARLETEM 102
Query: 71 VR-------QDLMNITFTNKHRWFPVRKMRQKK 96
+R ++L + +T KHRWFP+ + R+++
Sbjct: 103 LRNKPAPTIEELSKMFYTTKHRWFPIGQYRRRR 135
>gi|395858656|ref|XP_003801678.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like [Otolemur
garnettii]
Length = 144
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEFV 71
+ A+T+DG T+ C+HP PYEH+ P+P+ + N + ++ K E +
Sbjct: 50 EFALTSDGRTIACYHPSADIPYEHTKPIPLPDSVGNNE----ETHDQVLKTRLAKTSERL 105
Query: 72 RQD-----LMNITFTNKHRWFPVRKMRQKKRYFKP 101
Q L + FT KH W+P + + + P
Sbjct: 106 EQGPMIEQLSKMFFTTKHGWYPRGQYHTRHKKLNP 140
>gi|391344499|ref|XP_003746535.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like
[Metaseiulus occidentalis]
Length = 122
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 9 LTHKIAITADGTTV-VCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQ---NVQEIYNVFK 64
L H + A+ + V WHPE+ PYEH+ P+ T ++ T + + N+ + VF
Sbjct: 24 LDHDCVVPAENDRMYVAWHPERDIPYEHTKPISATRREITAAAMNDSTPLNLPKGKLVFN 83
Query: 65 PKKEEFVRQDLMNITFTNKHRWFPVRKMRQKKR 97
+ E + L +T+TNKHRWF K R+ KR
Sbjct: 84 NIRNEV--EYLKRLTYTNKHRWFTQPKDRRLKR 114
>gi|395816600|ref|XP_003781786.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like isoform 2
[Otolemur garnettii]
Length = 135
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEFV 71
++A+T+DG T+VC+HP PYE + P+P+ + N + + Q + N K E
Sbjct: 48 ELALTSDGRTIVCYHPSLDIPYEPTKPIPLPDPVGNN---EETHDQVLKNRLAEKSERLE 104
Query: 72 R----QDLMNITFTNKHRWFP 88
+ + L + FT KHRW+P
Sbjct: 105 QGPMIEQLSKMFFTTKHRWYP 125
>gi|440911557|gb|ELR61211.1| 39S ribosomal protein L42, mitochondrial, partial [Bos grunniens
mutus]
Length = 128
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 17/86 (19%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPL----PVTEQQSTNSILKVQNVQEIYNVFKPKK 67
++A+T+D T+VC+HP PYEH+ P+ PV + T+ ++ ++E K
Sbjct: 48 ELALTSDARTIVCYHPSVDIPYEHTKPIPRPDPVHNNEETHDLVLKTRLEE--------K 99
Query: 68 EEFVRQD-----LMNITFTNKHRWFP 88
E + Q L + FT KHRW+P
Sbjct: 100 SEHLEQGPMIEQLSKMFFTTKHRWYP 125
>gi|444715174|gb|ELW56046.1| 39S ribosomal protein L42, mitochondrial [Tupaia chinensis]
Length = 144
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYN-VFKPKKEE- 69
++A+T+DG T+V +HP PYEH+ PLP + V+N +E + V K + EE
Sbjct: 25 ELALTSDGRTIVRYHPSVDVPYEHTEPLPRRD--------PVRNNEETHGRVLKSRLEEK 76
Query: 70 ---FVRQDLMN----ITFTNKHRWFPVRKMRQKKRYFKP 101
F + ++ +FT KHRW P + ++++ P
Sbjct: 77 SAHFEQGSMIGQLSLTSFTTKHRWCPCGQYHRRRKKVDP 115
>gi|312065101|ref|XP_003135626.1| hypothetical protein LOAG_00037 [Loa loa]
gi|307769207|gb|EFO28441.1| hypothetical protein LOAG_00037 [Loa loa]
Length = 132
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 1 MRTKRLVPLTHKIAITADGTTVVCWHPEQPFPYEHSLPLPV----TEQQSTNSILK-VQN 55
+ T + L+ + TV CWHPE+ FPYEHS P+ + TE+QS+ ++ K +
Sbjct: 23 LSTCEEIDLSKPCTVIYKSGTVACWHPERSFPYEHSKPIDLKEIETEKQSSGALNKETEC 82
Query: 56 VQEIYN-VFKPKKEEFVRQDLMNITFTNKHRWF 87
+ ++ V + ++ L I +T KH W+
Sbjct: 83 ITDLGGSVARIGPRNYI---LREIFYTGKHEWY 112
>gi|390348709|ref|XP_003727062.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 105
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 17/83 (20%)
Query: 16 TADGTTVVCWHPEQPFPYEHSLPLPVTE----QQSTNSILKVQNVQEIYNVFKPKKEEFV 71
+ D ++C+HP + FPYEH+ P+P + ++S +L+V+ FK K +
Sbjct: 12 SKDKDMIICYHPTESFPYEHTKPIPRPDPSRPEESAEGMLRVK--------FKSKSWDKE 63
Query: 72 R-----QDLMNITFTNKHRWFPV 89
R ++L ++ +T KHRWFP+
Sbjct: 64 RHGPSIEELSDMFYTTKHRWFPL 86
>gi|114145778|ref|NP_001041384.1| uncharacterized protein LOC367117 [Rattus norvegicus]
gi|45478214|gb|AAS66278.1| LRRGT00187 [Rattus norvegicus]
gi|149019073|gb|EDL77714.1| rCG65848 [Rattus norvegicus]
Length = 201
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEF- 70
++A+T DG T+VC+HP PY+H+ P+P + +N Q ++ + E+
Sbjct: 21 ELALTYDGRTIVCYHPSVDIPYKHTKPIPQPDLLHSNEETHEQILRTKLEGNRKHLEQGP 80
Query: 71 VRQDLMNITFTNKHRWFP 88
+ + L + FT KHRW+P
Sbjct: 81 MTEQLSKVFFTTKHRWYP 98
>gi|443706559|gb|ELU02547.1| hypothetical protein CAPTEDRAFT_222498 [Capitella teleta]
Length = 194
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 13 IAITADGTTVVCWHPEQPFPYEHSLPLP 40
I + DG+T++CWHPE +PYEHS PLP
Sbjct: 44 IGFSRDGSTIICWHPEPDYPYEHSKPLP 71
>gi|170594521|ref|XP_001902012.1| Conserved hypothetical protein [Brugia malayi]
gi|158590956|gb|EDP29571.1| Conserved hypothetical protein, putative [Brugia malayi]
Length = 132
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 7 VPLTHKIAITADGTTVVCWHPEQPFPYEHSLPLPVTE---QQSTNSILKVQNVQEIYNVF 63
+ L+ + T+ CWHPE+ FPYEHS P+ + E Q+ +S+L + + I ++
Sbjct: 29 IDLSKPCTVICKSGTIACWHPERSFPYEHSKPIDLKEIKAQKQGSSVLN-KETECIADLG 87
Query: 64 KPKKEEFVRQDLM-NITFTNKHRWF 87
R ++ I +T KH W+
Sbjct: 88 GSLARTGPRNYILREIFYTGKHEWY 112
>gi|402590942|gb|EJW84872.1| hypothetical protein WUBG_04218 [Wuchereria bancrofti]
Length = 132
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 7 VPLTHKIAITADGTTVVCWHPEQPFPYEHSLPLPV----TEQQSTNSILK-VQNVQEIYN 61
+ L+ + T+ CWHPE+ FPYEHS P+ + T++Q ++++ K + + ++
Sbjct: 29 IDLSKPCTVICKSGTIACWHPERSFPYEHSKPIDLKKIETQKQGSSALNKETECIADLGG 88
Query: 62 -VFKPKKEEFVRQDLMNITFTNKHRWF 87
+ + ++ L I +T KH W+
Sbjct: 89 SLARTGPRNYI---LREIFYTGKHEWY 112
>gi|71999694|ref|NP_501580.3| Protein LPL-1, isoform a [Caenorhabditis elegans]
gi|14581728|gb|AAK69380.1|AF202930_1 Ny [Caenorhabditis elegans]
gi|13548493|emb|CAA92571.2| Protein LPL-1, isoform a [Caenorhabditis elegans]
Length = 109
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEFV 71
K+ + A+GT + WHP Q FPYEH+ P+ + + ++ + ++ + E V
Sbjct: 20 KVVVCANGT-IAAWHPPQHFPYEHTKPIDLGSLTKKDQSSRLSAAAKASSIPR----EPV 74
Query: 72 RQDLMNITFTNKHRWFPVRKMRQKKRYFKPLIPDRE 107
+L +I +T+KH W+ R ++ R IP R+
Sbjct: 75 NAELKDIFYTSKHEWY-SRTREERLRNVAAPIPRRK 109
>gi|354506855|ref|XP_003515475.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like
[Cricetulus griseus]
gi|344258325|gb|EGW14429.1| 28S ribosomal protein L42, mitochondrial [Cricetulus griseus]
Length = 141
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEF- 70
++A+T+D T+VC++P PYEH+ P+P N Q ++ + + E+
Sbjct: 47 ELALTSDDRTIVCYYPSVDIPYEHTKPIPQATILHNNEETHEQVLKAKLGIKIDQLEQGP 106
Query: 71 VRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
+ + L + FT KHRW+P + ++ + P
Sbjct: 107 MIEQLSKVFFTTKHRWYPHGQYHRRCKKLNP 137
>gi|268535728|ref|XP_002632999.1| Hypothetical protein CBG21765 [Caenorhabditis briggsae]
Length = 109
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEFV 71
K+ + ++GT + WHP Q FPYEH+ P+ ++ + S ++ + + E V
Sbjct: 20 KVVVCSNGT-IAAWHPPQEFPYEHTKPIDLSSKTDQTSSSRLSAAARASVIPR----EPV 74
Query: 72 RQDLMNITFTNKHRWFPVRKMRQKKRYFKPL 102
+L I +T+KH W+ + + + PL
Sbjct: 75 NAELKEIFYTSKHEWYSRTREERLRNVAAPL 105
>gi|392345524|ref|XP_003749292.1| PREDICTED: 28S ribosomal protein L42, mitochondrial-like [Rattus
norvegicus]
Length = 141
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEF- 70
++A+T+DG T+ C+ P PYEH+ P+P + N Q ++ + E+
Sbjct: 47 ELALTSDGRTLPCYDPSMDIPYEHTKPIPQPDLLHNNEETHEQILRTKLEGNRKHLEQGP 106
Query: 71 VRQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
+ + + FT KHRW+P + ++ + P
Sbjct: 107 MLEQFSKVFFTTKHRWYPHGQYHRRHKKLNP 137
>gi|90103321|gb|ABD85505.1| mitochondrial 28S ribosomal protein S32-like [Ictalurus punctatus]
Length = 128
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Query: 13 IAITADGTTVVCWHPEQPFPYEHSLPLPVTE-----QQSTNSILKVQNVQEIYNVFKPKK 67
+ +T DG T+VC+HP YE + P+P+ + ++ + +LK Q ++I K KK
Sbjct: 54 LGVTRDGETIVCFHPAPDIAYELTKPIPIPDPTLDTAETHDLVLKSQLNKDI---LKGKK 110
Query: 68 EEFVRQDLMNITFTNKHRW 86
+ ++L + +T KHRW
Sbjct: 111 APAI-EELAKMFYTTKHRW 128
>gi|339234501|ref|XP_003378805.1| conserved hypothetical protein [Trichinella spiralis]
gi|316978604|gb|EFV61576.1| conserved hypothetical protein [Trichinella spiralis]
Length = 111
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 14 AITADGTTVVCWHPEQPFPYEHSLP--LPVTEQQSTNSILKVQNVQEIY-NVFKPKKEEF 70
A++++G +V +HP +PFPYEHS P L T + + + + VQE Y V P+
Sbjct: 16 ALSSEGI-IVAYHPRKPFPYEHSKPVLLNATATEKEDDSILSEEVQERYKTVHYPRGPSL 74
Query: 71 VRQDLMNITFTNKH 84
D N+ +TNKH
Sbjct: 75 --PDCQNMFYTNKH 86
>gi|308455914|ref|XP_003090444.1| hypothetical protein CRE_04408 [Caenorhabditis remanei]
gi|308263203|gb|EFP07156.1| hypothetical protein CRE_04408 [Caenorhabditis remanei]
Length = 297
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEFV 71
K+ + A+GT + WHP Q FPYEH+ P+ ++ + ++ + V P+ E +
Sbjct: 20 KVVVCANGT-IAAWHPPQEFPYEHTKPIDLSALTKKDQSSRLSAAAKASAV--PR--EPI 74
Query: 72 RQDLMNITFTNKHRWF 87
+L I +T+KH W+
Sbjct: 75 NAELKEIFYTSKHEWY 90
>gi|308478056|ref|XP_003101240.1| CRE-LPL-1 protein [Caenorhabditis remanei]
gi|308263945|gb|EFP07898.1| CRE-LPL-1 protein [Caenorhabditis remanei]
Length = 297
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEFV 71
K+ + A+GT + WHP Q FPYEH+ P+ ++ + ++ + V P+ E +
Sbjct: 20 KVVVCANGT-IAAWHPPQEFPYEHTKPIDLSALTKKDQSSRLSAAAKASAV--PR--EPI 74
Query: 72 RQDLMNITFTNKHRWF 87
+L I +T+KH W+
Sbjct: 75 NAELKEIFYTSKHEWY 90
>gi|341878279|gb|EGT34214.1| CBN-LPL-1 protein [Caenorhabditis brenneri]
Length = 285
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEFV 71
K+ + A+GT + WHP Q FPYEH+ P+ + + + ++ + + P+ E V
Sbjct: 20 KVVVCANGT-IAAWHPPQEFPYEHTRPIDLEALKKKDQSSRLSAAAKASAI--PR--EPV 74
Query: 72 RQDLMNITFTNKHRWF 87
+L I +T+KH W+
Sbjct: 75 NAELKEIFYTSKHEWY 90
>gi|119617889|gb|EAW97483.1| mitochondrial ribosomal protein L42, isoform CRA_a [Homo sapiens]
Length = 98
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQS 46
++A+T+DG T+VC+HP PYEH+ P+ EQ S
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHTKEGPMIEQLS 82
>gi|410965314|ref|XP_003989195.1| PREDICTED: 39S ribosomal protein L42, mitochondrial [Felis catus]
Length = 149
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 14/87 (16%)
Query: 12 KIAITADGTTVVCWHPEQ-----PFPYEHSLPLP-----VTEQQSTNSILKVQNVQEIYN 61
++A+T+DG T+VC+ PYEH+ P+P +++ + +LK + +
Sbjct: 64 ELALTSDGRTIVCYXXXXXXXXVDIPYEHTKPIPRPDPVCNNEETHDQVLKTR----LEE 119
Query: 62 VFKPKKEEFVRQDLMNITFTNKHRWFP 88
+P ++ + + L + FT KHRW+P
Sbjct: 120 KNEPLEQGPMIEQLSKMFFTTKHRWYP 146
>gi|395825328|ref|XP_003785889.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like [Otolemur
garnettii]
Length = 123
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVFKPKKEEF- 70
++A+ +DG T+V +HP PYEH+ P+P+ + S N Q ++ + E+
Sbjct: 33 ELALISDGRTIVRYHPSVDVPYEHTKPIPLPDPVSNNEETHDQGLKTRLAEKSERLEQGS 92
Query: 71 VRQDLMNITFTNKHRWFP 88
+ + L + FT KH +P
Sbjct: 93 MIEQLSKMFFTTKHPGYP 110
>gi|440895811|gb|ELR47907.1| hypothetical protein M91_19959 [Bos grunniens mutus]
Length = 118
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 16/82 (19%)
Query: 15 ITADGTTVVCWHPEQPFPYEHSLPL----PVTEQQSTNSILKVQNVQEIYNVFKPKKEEF 70
+T+DG + C++P PYEH P+ PV +++ + LK + + K+E F
Sbjct: 28 VTSDGRIIECYYPSMDIPYEHIKPMPQPDPVRNEETHDLGLKTK--------LEEKREHF 79
Query: 71 VR----QDLMNITFTNKHRWFP 88
+ + L + FT KH W+P
Sbjct: 80 EQGPTIEQLSKMFFTTKHHWYP 101
>gi|444732198|gb|ELW72504.1| Importin-8 [Tupaia chinensis]
Length = 1021
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLP 40
++A+T+DG T+VC+H PYEH+ P P
Sbjct: 980 ELALTSDGRTIVCYHSSVDIPYEHTEPTP 1008
>gi|148689659|gb|EDL21606.1| DNA segment, Chr 10, ERATO Doi 322, expressed, isoform CRA_b [Mus
musculus]
Length = 77
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 13 IAITADGTTVVCWHPEQPFPYEHS 36
+A+TADG T+VC+HP PYEH+
Sbjct: 48 LALTADGRTIVCYHPSVDIPYEHT 71
>gi|148689658|gb|EDL21605.1| DNA segment, Chr 10, ERATO Doi 322, expressed, isoform CRA_a [Mus
musculus]
Length = 79
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHS 36
+A+TADG T+VC+HP PYEH+
Sbjct: 47 DLALTADGRTIVCYHPSVDIPYEHT 71
>gi|444727010|gb|ELW67520.1| 39S ribosomal protein L42, mitochondrial [Tupaia chinensis]
Length = 75
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLP 40
++A+T+DG T+ C+H PYEH+ P+P
Sbjct: 19 ELALTSDGRTIACYHLSVDIPYEHTKPIP 47
>gi|119617892|gb|EAW97486.1| mitochondrial ribosomal protein L42, isoform CRA_d [Homo sapiens]
Length = 78
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHS 36
++A+T+DG T+VC+HP PYEH+
Sbjct: 48 ELALTSDGRTIVCYHPSVDIPYEHT 72
>gi|357615573|gb|EHJ69730.1| hypothetical protein KGM_01704 [Danaus plexippus]
Length = 53
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 53 VQNVQEIYNVFKPKKEEFVRQDLMNITFTNKHRWFPVRKMRQKKR 97
+ + E+ VFK K E RQ L ++T T HRWFP + ++ K+
Sbjct: 1 MSDYSEVRKVFKDIKPEMARQQLASLTLTTPHRWFPRARDKKAKK 45
>gi|221219356|gb|ACM08339.1| Mitochondrial 28S ribosomal protein S32, mitochondrial precursor
[Salmo salar]
Length = 89
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPL 39
+I +T+DG T+VC+HP + PYE + P+
Sbjct: 50 EIGVTSDGKTIVCYHPSEDVPYELTQPI 77
>gi|377834953|ref|XP_003688828.1| PREDICTED: 28S ribosomal protein L42, mitochondrial-like [Mus
musculus]
Length = 151
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 13 IAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIY-NVFKPKKEEFV 71
+ +T+D TVVC+H Y+H+ P+ + Q ++ I F + +
Sbjct: 58 LTLTSDDRTVVCYHTSVDISYKHTKPISQPDHLHNKEKTHKQVLKTILEGKFNGLDQGPI 117
Query: 72 RQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
++ L + FT HRWF + + + P
Sbjct: 118 KEQLSKVFFTTNHRWFLHGQFHRHSKKLNP 147
>gi|149067125|gb|EDM16858.1| rCG49024, isoform CRA_b [Rattus norvegicus]
Length = 77
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHS 36
++A+T+DG T+VC+HP PYEH+
Sbjct: 47 ELALTSDGRTIVCYHPSVDVPYEHT 71
>gi|377833864|ref|XP_003689393.1| PREDICTED: uncharacterized protein LOC622921 [Mus musculus]
Length = 324
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 13 IAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIY-NVFKPKKEEFV 71
+ +T+D TVVC+H Y+H+ P+ + Q ++ I F + +
Sbjct: 231 LTLTSDDRTVVCYHTSVDISYKHTKPISQPDHLHNKEKTHKQVLKTILEGKFNGLDQGPI 290
Query: 72 RQDLMNITFTNKHRWF 87
++ L + FT HRWF
Sbjct: 291 KEQLSKVFFTTNHRWF 306
>gi|148702923|gb|EDL34870.1| mCG1049427 [Mus musculus]
Length = 141
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 13 IAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIY-NVFKPKKEEFV 71
+ +T+D TVVC+H Y+H+ P+ + Q ++ I F + +
Sbjct: 48 LTLTSDDRTVVCYHTSVDISYKHTKPISQPDHLHNKEKTHKQVLKTILEGKFNGLDQGPI 107
Query: 72 RQDLMNITFTNKHRWFPVRKMRQKKRYFKP 101
++ L + FT HRWF + + + P
Sbjct: 108 KEQLSKVFFTTNHRWFLHGQFHRHSKKLNP 137
>gi|395538199|ref|XP_003771072.1| PREDICTED: 39S ribosomal protein L42, mitochondrial-like, partial
[Sarcophilus harrisii]
Length = 78
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHS 36
++A++ADG T+VC+HP PYEH+
Sbjct: 53 ELALSADGRTIVCYHPSVDVPYEHT 77
>gi|198422883|ref|XP_002126029.1| PREDICTED: similar to Mitochondrial 28S ribosomal protein S32,
mitochondrial precursor (S32mt) (MRP-S32) (MRP-L42)
(MRP-L31) isoform 2 [Ciona intestinalis]
gi|198422885|ref|XP_002125987.1| PREDICTED: similar to Mitochondrial 28S ribosomal protein S32,
mitochondrial precursor (S32mt) (MRP-S32) (MRP-L42)
(MRP-L31) isoform 1 [Ciona intestinalis]
Length = 159
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 51/103 (49%), Gaps = 18/103 (17%)
Query: 12 KIAITADGTTVVCWHPEQPFPYEHSLPLP-----VTEQQSTNSILKVQNVQEIYN---VF 63
++A++ D T+V +HPE+ YE ++P+P + ++ + ILK + + ++ V
Sbjct: 45 RVALSKDRRTIVMYHPEEMIKYEDTIPIPRHDPRYSANENADDILKYKLEKSGFSDKPVE 104
Query: 64 KPKKEEFV----------RQDLMNITFTNKHRWFPVRKMRQKK 96
+P ++ + +L + +T KH+W R ++ K
Sbjct: 105 RPSRDNILPITDKEVIPAAMELSELFYTTKHKWTQHRNVKLAK 147
>gi|256072052|ref|XP_002572351.1| Mitochondrial 28S ribosomal protein S32 (S32mt) (MRP-S32)
[Schistosoma mansoni]
gi|353231880|emb|CCD79235.1| putative mitochondrial 28S ribosomal protein S32 (S32mt)
(MRP-S32) [Schistosoma mansoni]
Length = 130
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 13 IAITADGTTVVCWHPEQPFPYEHSLPL 39
I ++ DG VVCWHP + PYE + P+
Sbjct: 36 ITLSPDGAVVVCWHPVRKVPYECTKPI 62
>gi|196003082|ref|XP_002111408.1| predicted protein [Trichoplax adhaerens]
gi|190585307|gb|EDV25375.1| predicted protein [Trichoplax adhaerens]
Length = 145
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 14 AITADGTTVVCWHPEQPFPYEHSLPL 39
AIT+DG VC+HP++ FP E++ L
Sbjct: 14 AITSDGRIFVCYHPDKKFPIEYTKSL 39
>gi|226480724|emb|CAX73459.1| hypothetical protein [Schistosoma japonicum]
Length = 130
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 13 IAITADGTTVVCWHPEQPFPYEHSLPL 39
I ++ DG +VCWHP + PYE + P+
Sbjct: 36 ITLSPDGGVIVCWHPVRKVPYECTKPI 62
>gi|76152578|gb|AAX24264.2| SJCHGC07550 protein [Schistosoma japonicum]
Length = 125
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 13 IAITADGTTVVCWHPEQPFPYEHSLPL 39
I ++ DG +VCWHP + PYE + P+
Sbjct: 31 ITLSPDGGVIVCWHPVRKVPYECTKPI 57
>gi|442759949|gb|JAA72133.1| Putative mitochondrial 28s ribosomal protein s32 [Ixodes ricinus]
Length = 72
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 15/18 (83%)
Query: 10 THKIAITADGTTVVCWHP 27
+H I +T DG+T+VCWHP
Sbjct: 42 SHMIVLTDDGSTIVCWHP 59
>gi|260811388|ref|XP_002600404.1| hypothetical protein BRAFLDRAFT_284539 [Branchiostoma floridae]
gi|229285691|gb|EEN56416.1| hypothetical protein BRAFLDRAFT_284539 [Branchiostoma floridae]
Length = 471
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 4 KRLVPLTHKIAITADGTTVVCWHPEQPFPYEHSLPLPVTEQQSTNSILKVQNVQEIYNVF 63
K ++ LTH +++T G V C+H PF H L + Q+ ++ ++ +V YNVF
Sbjct: 378 KSVITLTH-VSLTPAGVPVRCFHLVTPFDLAHHLNY-FRQTQTKGTVRRIPDVA--YNVF 433
Query: 64 KPKKEE 69
K EE
Sbjct: 434 KKNFEE 439
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,762,318,084
Number of Sequences: 23463169
Number of extensions: 65221513
Number of successful extensions: 160502
Number of sequences better than 100.0: 135
Number of HSP's better than 100.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 160280
Number of HSP's gapped (non-prelim): 136
length of query: 109
length of database: 8,064,228,071
effective HSP length: 77
effective length of query: 32
effective length of database: 6,257,564,058
effective search space: 200242049856
effective search space used: 200242049856
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)