Query psy8430
Match_columns 361
No_of_seqs 342 out of 2657
Neff 10.6
Searched_HMMs 29240
Date Fri Aug 16 18:39:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8430.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8430hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.2E-35 4.2E-40 271.9 25.7 305 10-361 2-341 (410)
2 2ynn_A Coatomer subunit beta'; 100.0 4.6E-29 1.6E-33 219.0 24.9 163 152-342 4-171 (304)
3 2ynn_A Coatomer subunit beta'; 100.0 1.1E-28 3.7E-33 216.7 27.0 190 134-361 30-231 (304)
4 4gqb_B Methylosome protein 50; 100.0 7.6E-29 2.6E-33 221.2 25.8 196 133-361 97-302 (344)
5 1vyh_C Platelet-activating fac 100.0 3.1E-29 1.1E-33 229.4 22.1 170 154-360 101-278 (410)
6 3ow8_A WD repeat-containing pr 100.0 2.3E-28 7.7E-33 216.3 26.8 199 131-361 50-251 (321)
7 2pbi_B Guanine nucleotide-bind 100.0 4.7E-28 1.6E-32 217.2 28.6 179 152-361 55-243 (354)
8 1got_B GT-beta; complex (GTP-b 100.0 5.1E-28 1.7E-32 215.8 28.3 181 152-361 46-229 (340)
9 3ow8_A WD repeat-containing pr 100.0 3.9E-28 1.3E-32 214.8 23.7 181 149-361 110-293 (321)
10 2hes_X YDR267CP; beta-propelle 100.0 1E-27 3.6E-32 212.9 25.7 204 133-360 28-252 (330)
11 3frx_A Guanine nucleotide-bind 100.0 2.6E-27 8.8E-32 209.3 28.0 192 133-357 34-237 (319)
12 3frx_A Guanine nucleotide-bind 100.0 1.1E-27 3.8E-32 211.6 24.7 174 150-361 6-199 (319)
13 2pbi_B Guanine nucleotide-bind 100.0 1.2E-26 4E-31 208.1 29.6 173 152-361 145-329 (354)
14 2pm7_B Protein transport prote 100.0 1.8E-27 6.1E-32 208.2 22.6 177 154-361 2-207 (297)
15 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.3E-27 7.8E-32 212.0 23.3 182 151-361 5-197 (345)
16 4ery_A WD repeat-containing pr 100.0 8.5E-27 2.9E-31 205.1 26.3 165 151-343 13-180 (312)
17 1got_B GT-beta; complex (GTP-b 100.0 1.3E-26 4.4E-31 206.6 27.4 172 152-361 134-315 (340)
18 4ery_A WD repeat-containing pr 100.0 3.3E-26 1.1E-30 201.3 29.7 185 136-359 42-235 (312)
19 2hes_X YDR267CP; beta-propelle 100.0 5.3E-27 1.8E-31 208.3 24.6 185 151-361 4-200 (330)
20 3iz6_a 40S ribosomal protein R 100.0 5.5E-28 1.9E-32 218.9 17.5 182 151-361 56-252 (380)
21 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-26 4.9E-31 206.8 25.3 183 134-341 33-223 (345)
22 2pm7_B Protein transport prote 100.0 2E-26 6.8E-31 201.5 25.1 185 132-342 24-237 (297)
23 4g56_B MGC81050 protein; prote 100.0 8E-27 2.8E-31 209.4 22.1 193 138-361 114-314 (357)
24 1erj_A Transcriptional repress 100.0 4.9E-26 1.7E-30 207.0 27.6 194 135-361 141-355 (393)
25 4gqb_B Methylosome protein 50; 100.0 8.4E-27 2.9E-31 208.0 21.6 166 158-361 79-260 (344)
26 3iz6_a 40S ribosomal protein R 99.9 3.1E-26 1.1E-30 207.3 23.6 172 154-361 150-347 (380)
27 2xzm_R RACK1; ribosome, transl 99.9 8E-26 2.7E-30 201.8 25.7 177 151-361 11-216 (343)
28 2xzm_R RACK1; ribosome, transl 99.9 2E-25 6.8E-30 199.2 27.5 183 132-341 42-242 (343)
29 3bg1_A Protein SEC13 homolog; 99.9 6.4E-27 2.2E-31 206.5 16.4 174 156-361 8-215 (316)
30 3dwl_C Actin-related protein 2 99.9 7.9E-27 2.7E-31 210.6 16.3 201 135-361 29-254 (377)
31 3f3f_A Nucleoporin SEH1; struc 99.9 2E-25 6.8E-30 198.1 24.7 223 133-358 27-351 (351)
32 3dm0_A Maltose-binding peripla 99.9 8.6E-25 2.9E-29 213.1 30.2 187 132-343 398-592 (694)
33 1erj_A Transcriptional repress 99.9 3.1E-25 1.1E-29 201.7 25.3 169 163-360 125-312 (393)
34 1nr0_A Actin interacting prote 99.9 2.9E-25 9.8E-30 213.3 26.1 165 151-343 137-355 (611)
35 3bg1_A Protein SEC13 homolog; 99.9 3.5E-26 1.2E-30 201.8 17.3 187 132-343 28-247 (316)
36 3jrp_A Fusion protein of prote 99.9 1.9E-25 6.5E-30 201.0 21.0 184 152-361 2-209 (379)
37 2aq5_A Coronin-1A; WD40 repeat 99.9 8.7E-25 3E-29 199.2 24.3 183 135-345 53-256 (402)
38 2ymu_A WD-40 repeat protein; u 99.9 2E-24 6.9E-29 205.8 27.0 176 150-361 374-552 (577)
39 3vl1_A 26S proteasome regulato 99.9 5.4E-25 1.9E-29 201.4 21.3 211 139-358 119-334 (420)
40 1nr0_A Actin interacting prote 99.9 7.8E-25 2.7E-29 210.3 22.7 186 140-361 40-242 (611)
41 3ei3_B DNA damage-binding prot 99.9 1.9E-24 6.6E-29 195.5 23.9 180 150-360 62-252 (383)
42 2ymu_A WD-40 repeat protein; u 99.9 2.5E-24 8.4E-29 205.2 25.2 159 150-337 415-576 (577)
43 3dm0_A Maltose-binding peripla 99.9 1.9E-24 6.3E-29 210.8 24.8 178 152-361 373-564 (694)
44 4aow_A Guanine nucleotide-bind 99.9 3.8E-24 1.3E-28 189.8 24.1 176 149-361 26-218 (340)
45 3f3f_A Nucleoporin SEH1; struc 99.9 1.8E-24 6.2E-29 191.8 22.0 133 155-304 5-145 (351)
46 4e54_B DNA damage-binding prot 99.9 7.1E-25 2.4E-29 202.0 19.9 177 134-344 137-328 (435)
47 4e54_B DNA damage-binding prot 99.9 1.8E-25 6.3E-30 205.9 15.4 180 150-360 108-298 (435)
48 2j04_B YDR362CP, TAU91; beta p 99.9 1E-24 3.5E-29 204.5 20.2 193 137-361 181-400 (524)
49 3v7d_B Cell division control p 99.9 9.7E-24 3.3E-28 195.8 26.7 214 134-361 137-355 (464)
50 1k8k_C P40, ARP2/3 complex 41 99.9 7.1E-24 2.4E-28 190.5 25.0 199 134-360 25-246 (372)
51 4g56_B MGC81050 protein; prote 99.9 2.3E-24 7.9E-29 193.4 21.5 172 139-341 161-341 (357)
52 4gq1_A NUP37; propeller, trans 99.9 5E-25 1.7E-29 200.3 17.1 216 134-361 106-362 (393)
53 3gre_A Serine/threonine-protei 99.9 1.7E-24 5.8E-29 199.3 20.5 199 149-359 50-304 (437)
54 3jrp_A Fusion protein of prote 99.9 9.3E-24 3.2E-28 190.0 24.3 185 134-344 28-241 (379)
55 4h5i_A Guanine nucleotide-exch 99.9 1.3E-23 4.5E-28 189.0 25.0 178 136-341 154-341 (365)
56 3k26_A Polycomb protein EED; W 99.9 8.2E-24 2.8E-28 189.4 23.3 192 140-361 45-288 (366)
57 2w18_A PALB2, fancn, partner a 99.9 7.9E-24 2.7E-28 183.8 21.3 158 149-341 166-355 (356)
58 3zwl_B Eukaryotic translation 99.9 2E-23 6.8E-28 187.0 24.4 172 152-360 23-220 (369)
59 2xyi_A Probable histone-bindin 99.9 1.8E-23 6E-28 192.4 23.4 186 151-361 171-381 (430)
60 3mmy_A MRNA export factor; mRN 99.9 8.7E-24 3E-28 189.3 20.5 140 147-313 25-171 (368)
61 3ei3_B DNA damage-binding prot 99.9 3.3E-23 1.1E-27 187.3 24.2 183 132-345 89-284 (383)
62 2aq5_A Coronin-1A; WD40 repeat 99.9 4.2E-23 1.4E-27 188.0 24.8 178 138-343 103-299 (402)
63 4gga_A P55CDC, cell division c 99.9 9.3E-23 3.2E-27 187.0 27.1 155 137-318 123-281 (420)
64 3vl1_A 26S proteasome regulato 99.9 1.7E-23 5.7E-28 191.4 22.0 187 135-360 74-292 (420)
65 3mkq_A Coatomer beta'-subunit; 99.9 3.1E-23 1.1E-27 205.4 25.5 163 152-342 4-171 (814)
66 3dwl_C Actin-related protein 2 99.9 6E-25 2E-29 198.3 12.1 160 157-341 7-175 (377)
67 1p22_A F-BOX/WD-repeat protein 99.9 5.9E-23 2E-27 189.1 25.5 186 134-361 148-339 (435)
68 3k26_A Polycomb protein EED; W 99.9 2.2E-23 7.6E-28 186.6 22.1 212 135-357 91-332 (366)
69 4aez_A CDC20, WD repeat-contai 99.9 2.1E-22 7E-27 183.5 28.2 177 135-342 109-292 (401)
70 3mkq_A Coatomer beta'-subunit; 99.9 5.1E-23 1.7E-27 203.9 26.2 192 136-360 32-230 (814)
71 2j04_A TAU60, YPL007P, hypothe 99.9 1.4E-23 4.6E-28 193.6 20.1 173 159-361 83-268 (588)
72 3jro_A Fusion protein of prote 99.9 9.1E-24 3.1E-28 207.5 19.8 182 154-361 2-207 (753)
73 3lrv_A PRE-mRNA-splicing facto 99.9 5.1E-23 1.8E-27 183.5 23.0 182 133-342 89-291 (343)
74 2j04_B YDR362CP, TAU91; beta p 99.9 4.6E-24 1.6E-28 200.1 16.7 158 154-338 259-425 (524)
75 4ggc_A P55CDC, cell division c 99.9 3.5E-22 1.2E-26 175.5 27.1 141 137-304 43-183 (318)
76 3jro_A Fusion protein of prote 99.9 5.6E-23 1.9E-27 201.9 24.3 187 132-344 24-239 (753)
77 1gxr_A ESG1, transducin-like e 99.9 4.4E-22 1.5E-26 176.1 27.7 179 135-343 115-296 (337)
78 1k8k_C P40, ARP2/3 complex 41 99.9 6.7E-23 2.3E-27 184.1 22.3 196 138-343 73-274 (372)
79 1r5m_A SIR4-interacting protei 99.9 3.2E-22 1.1E-26 182.6 26.3 182 149-359 137-393 (425)
80 3v7d_B Cell division control p 99.9 1.5E-22 5E-27 187.8 24.1 169 153-361 113-313 (464)
81 2ovr_B FBW7, F-BOX/WD repeat p 99.9 2.3E-22 8E-27 185.6 25.3 148 137-318 137-284 (445)
82 2w18_A PALB2, fancn, partner a 99.9 8.4E-23 2.9E-27 177.3 20.7 161 163-360 113-327 (356)
83 3zwl_B Eukaryotic translation 99.9 1.2E-21 4E-26 175.4 28.6 189 135-343 50-249 (369)
84 2xyi_A Probable histone-bindin 99.9 3.4E-23 1.2E-27 190.5 18.9 183 155-361 122-324 (430)
85 3dw8_B Serine/threonine-protei 99.9 6.6E-23 2.3E-27 188.9 20.5 202 134-359 45-328 (447)
86 3i2n_A WD repeat-containing pr 99.9 6.4E-23 2.2E-27 183.1 19.7 195 137-361 88-324 (357)
87 3odt_A Protein DOA1; ubiquitin 99.9 3.4E-22 1.2E-26 175.0 23.9 174 150-359 7-185 (313)
88 1sq9_A Antiviral protein SKI8; 99.9 7.6E-23 2.6E-27 185.6 20.2 198 131-356 28-276 (397)
89 3gre_A Serine/threonine-protei 99.9 1.5E-22 5E-27 186.4 20.9 162 160-358 167-370 (437)
90 4aez_A CDC20, WD repeat-contai 99.9 5.3E-22 1.8E-26 180.8 24.3 167 151-346 207-383 (401)
91 1gxr_A ESG1, transducin-like e 99.9 2E-21 6.8E-26 171.8 27.3 189 138-360 71-267 (337)
92 3sfz_A APAF-1, apoptotic pepti 99.9 3.1E-22 1.1E-26 207.1 25.5 164 152-343 606-774 (1249)
93 2pm9_A Protein WEB1, protein t 99.9 6.9E-23 2.3E-27 187.0 18.3 193 137-361 87-308 (416)
94 3dw8_B Serine/threonine-protei 99.9 7.6E-23 2.6E-27 188.5 18.8 198 159-359 26-274 (447)
95 3sfz_A APAF-1, apoptotic pepti 99.9 4.2E-22 1.4E-26 206.0 26.4 181 149-361 645-885 (1249)
96 2oaj_A Protein SNI1; WD40 repe 99.9 1.9E-23 6.4E-28 208.5 15.5 200 155-358 429-675 (902)
97 3mmy_A MRNA export factor; mRN 99.9 7.5E-22 2.6E-26 176.6 24.0 222 133-361 58-318 (368)
98 4aow_A Guanine nucleotide-bind 99.9 2.7E-21 9.1E-26 171.5 27.2 192 135-357 57-256 (340)
99 3odt_A Protein DOA1; ubiquitin 99.9 1E-21 3.5E-26 172.0 24.2 172 136-343 121-296 (313)
100 1p22_A F-BOX/WD-repeat protein 99.9 6E-22 2.1E-26 182.4 23.5 174 149-361 201-388 (435)
101 2vdu_B TRNA (guanine-N(7)-)-me 99.9 8.2E-22 2.8E-26 182.3 24.1 194 134-357 120-354 (450)
102 1sq9_A Antiviral protein SKI8; 99.9 2.4E-22 8.3E-27 182.3 19.9 169 154-355 109-330 (397)
103 1r5m_A SIR4-interacting protei 99.9 4.3E-22 1.5E-26 181.7 21.5 165 158-360 42-249 (425)
104 2ovr_B FBW7, F-BOX/WD repeat p 99.9 2.3E-21 7.7E-26 179.0 26.5 165 149-356 187-357 (445)
105 4a11_B DNA excision repair pro 99.9 2.8E-22 9.7E-27 182.1 20.2 163 152-343 34-218 (408)
106 2pm9_A Protein WEB1, protein t 99.9 4.2E-22 1.4E-26 181.7 21.4 163 155-344 159-338 (416)
107 1yfq_A Cell cycle arrest prote 99.9 1.2E-21 3.9E-26 174.0 22.4 219 134-360 28-296 (342)
108 2vdu_B TRNA (guanine-N(7)-)-me 99.9 3.3E-22 1.1E-26 185.0 19.1 170 157-355 98-279 (450)
109 1pgu_A Actin interacting prote 99.9 2.7E-21 9.1E-26 185.3 24.6 174 150-361 149-342 (615)
110 4h5i_A Guanine nucleotide-exch 99.9 8.5E-22 2.9E-26 177.2 19.8 171 159-361 131-315 (365)
111 2oaj_A Protein SNI1; WD40 repe 99.9 1.6E-21 5.4E-26 194.6 23.4 164 158-357 14-192 (902)
112 1yfq_A Cell cycle arrest prote 99.9 5.3E-22 1.8E-26 176.2 17.6 157 156-343 6-179 (342)
113 3i2n_A WD repeat-containing pr 99.9 1.1E-21 3.7E-26 175.1 19.6 194 138-360 43-261 (357)
114 1pgu_A Actin interacting prote 99.9 6.2E-21 2.1E-25 182.7 25.3 187 136-357 85-293 (615)
115 4a11_B DNA excision repair pro 99.9 1.3E-20 4.5E-25 171.0 26.2 157 159-344 97-277 (408)
116 4gga_A P55CDC, cell division c 99.9 2.1E-20 7.3E-25 171.2 25.3 161 152-341 221-393 (420)
117 3lrv_A PRE-mRNA-splicing facto 99.9 2.2E-21 7.6E-26 172.9 17.9 179 131-344 50-245 (343)
118 4gq1_A NUP37; propeller, trans 99.9 1.4E-21 4.7E-26 177.6 16.3 153 159-344 87-287 (393)
119 3vu4_A KMHSV2; beta-propeller 99.9 6.3E-21 2.1E-25 170.9 20.2 175 162-342 59-270 (355)
120 2j04_A TAU60, YPL007P, hypothe 99.9 3.9E-20 1.3E-24 170.7 21.4 158 153-340 117-296 (588)
121 4ggc_A P55CDC, cell division c 99.9 1.4E-19 4.7E-24 158.8 23.7 162 151-341 140-313 (318)
122 3vu4_A KMHSV2; beta-propeller 99.8 3.9E-19 1.3E-23 159.1 20.7 99 179-303 155-272 (355)
123 2oit_A Nucleoporin 214KDA; NH2 99.8 7.4E-20 2.5E-24 168.1 15.2 155 159-342 90-277 (434)
124 1l0q_A Surface layer protein; 99.8 1.1E-17 3.7E-22 151.4 25.0 173 136-342 9-188 (391)
125 1l0q_A Surface layer protein; 99.8 3.3E-17 1.1E-21 148.2 25.2 174 149-358 104-286 (391)
126 3bws_A Protein LP49; two-domai 99.8 2.7E-17 9.2E-22 150.8 21.1 156 156-341 164-332 (433)
127 2oit_A Nucleoporin 214KDA; NH2 99.7 2.2E-17 7.5E-22 151.6 14.2 162 161-341 36-221 (434)
128 3bws_A Protein LP49; two-domai 99.7 6.7E-16 2.3E-20 141.5 24.0 173 149-356 199-399 (433)
129 2hqs_A Protein TOLB; TOLB, PAL 99.7 4.2E-16 1.4E-20 142.4 21.6 170 140-343 160-344 (415)
130 2hqs_A Protein TOLB; TOLB, PAL 99.7 2.1E-15 7E-20 137.8 22.4 168 155-359 216-398 (415)
131 2ojh_A Uncharacterized protein 99.6 2.1E-14 7.1E-19 123.9 18.1 158 156-341 36-204 (297)
132 1nir_A Nitrite reductase; hemo 99.6 2E-13 6.8E-18 128.7 25.6 189 140-360 201-422 (543)
133 3vgz_A Uncharacterized protein 99.6 3.6E-13 1.2E-17 119.5 25.2 165 149-343 119-303 (353)
134 1nir_A Nitrite reductase; hemo 99.6 7.3E-13 2.5E-17 124.9 28.0 181 138-355 158-363 (543)
135 1pby_B Quinohemoprotein amine 99.6 1.1E-12 3.8E-17 115.5 23.3 173 163-343 83-310 (337)
136 1ri6_A Putative isomerase YBHE 99.6 1.5E-12 5E-17 115.0 23.6 178 138-341 14-209 (343)
137 3u4y_A Uncharacterized protein 99.5 1.2E-12 4.2E-17 115.2 22.7 186 138-356 19-219 (331)
138 3vgz_A Uncharacterized protein 99.5 1.5E-12 5.2E-17 115.5 23.1 168 147-343 75-262 (353)
139 2ojh_A Uncharacterized protein 99.5 1.6E-13 5.3E-18 118.3 16.1 178 151-359 73-272 (297)
140 3u4y_A Uncharacterized protein 99.5 1.5E-12 5.2E-17 114.6 22.2 168 150-343 71-252 (331)
141 1ri6_A Putative isomerase YBHE 99.5 3.5E-12 1.2E-16 112.5 22.9 175 139-341 60-260 (343)
142 2ecf_A Dipeptidyl peptidase IV 99.5 2.9E-13 1E-17 132.6 16.8 127 161-313 36-192 (741)
143 1xfd_A DIP, dipeptidyl aminope 99.5 1.2E-13 4.2E-18 134.9 14.0 168 146-343 42-289 (723)
144 2ecf_A Dipeptidyl peptidase IV 99.5 2.8E-13 9.4E-18 132.8 16.4 156 153-341 143-367 (741)
145 2z3z_A Dipeptidyl aminopeptida 99.5 3.8E-13 1.3E-17 131.1 15.4 156 155-340 114-341 (706)
146 3hfq_A Uncharacterized protein 99.5 1.4E-11 4.7E-16 109.4 24.0 193 139-357 63-284 (347)
147 3scy_A Hypothetical bacterial 99.5 7.7E-12 2.6E-16 111.7 21.4 161 162-344 155-340 (361)
148 3hfq_A Uncharacterized protein 99.5 1.1E-11 3.6E-16 110.1 21.2 177 141-341 18-218 (347)
149 1pby_B Quinohemoprotein amine 99.4 6.6E-12 2.3E-16 110.4 19.1 134 150-312 20-173 (337)
150 1xfd_A DIP, dipeptidyl aminope 99.4 2.6E-13 9.1E-18 132.5 9.4 128 162-315 17-156 (723)
151 1k32_A Tricorn protease; prote 99.4 1.7E-12 5.7E-17 132.1 15.3 150 160-341 294-459 (1045)
152 1jmx_B Amine dehydrogenase; ox 99.4 2E-11 6.8E-16 108.0 19.7 184 150-342 74-324 (349)
153 1jmx_B Amine dehydrogenase; ox 99.4 2E-11 7E-16 107.9 19.5 145 139-312 21-185 (349)
154 1k32_A Tricorn protease; prote 99.4 3.7E-12 1.3E-16 129.5 16.1 154 155-337 330-498 (1045)
155 3o4h_A Acylamino-acid-releasin 99.4 1.9E-12 6.5E-17 123.4 12.7 139 164-341 112-274 (582)
156 1z68_A Fibroblast activation p 99.4 6.1E-13 2.1E-17 129.9 7.7 156 150-324 45-263 (719)
157 2z3z_A Dipeptidyl aminopeptida 99.3 1.7E-11 5.7E-16 119.5 15.8 137 164-324 183-366 (706)
158 3o4h_A Acylamino-acid-releasin 99.3 1.1E-11 3.9E-16 117.9 14.3 113 165-307 153-279 (582)
159 3azo_A Aminopeptidase; POP fam 99.3 2.9E-11 9.8E-16 117.0 13.5 158 154-341 117-323 (662)
160 1jof_A Carboxy-CIS,CIS-muconat 99.3 6.3E-10 2.1E-14 99.5 21.3 162 160-341 143-341 (365)
161 3scy_A Hypothetical bacterial 99.3 4.4E-10 1.5E-14 100.2 19.8 139 160-321 209-359 (361)
162 1jof_A Carboxy-CIS,CIS-muconat 99.3 1.8E-10 6.3E-15 103.0 17.0 161 160-343 38-226 (365)
163 1q7f_A NHL, brain tumor CG1071 99.3 1.2E-09 4.3E-14 93.9 21.1 158 151-337 109-276 (286)
164 2oiz_A Aromatic amine dehydrog 99.2 1.1E-09 3.6E-14 97.9 21.1 205 140-354 32-343 (361)
165 1z68_A Fibroblast activation p 99.2 2.2E-11 7.6E-16 118.9 10.2 113 166-307 20-144 (719)
166 2xdw_A Prolyl endopeptidase; a 99.2 3.4E-09 1.1E-13 103.4 24.9 137 159-318 122-291 (710)
167 3pe7_A Oligogalacturonate lyas 99.2 2E-09 6.7E-14 96.8 20.7 172 144-345 63-275 (388)
168 3fvz_A Peptidyl-glycine alpha- 99.2 3.3E-09 1.1E-13 93.4 21.4 153 161-341 23-225 (329)
169 4a5s_A Dipeptidyl peptidase 4 99.2 1E-10 3.5E-15 114.6 12.5 183 140-345 37-296 (740)
170 3azo_A Aminopeptidase; POP fam 99.2 2.5E-10 8.5E-15 110.4 14.2 160 154-341 60-272 (662)
171 3fvz_A Peptidyl-glycine alpha- 99.2 4.4E-09 1.5E-13 92.6 20.9 164 151-343 79-277 (329)
172 3e5z_A Putative gluconolactona 99.2 8.8E-09 3E-13 89.1 21.9 158 154-341 61-244 (296)
173 4a5s_A Dipeptidyl peptidase 4 99.1 1.4E-10 4.9E-15 113.6 11.4 116 162-307 17-146 (740)
174 3pe7_A Oligogalacturonate lyas 99.1 1.7E-09 5.9E-14 97.1 17.4 148 149-323 18-197 (388)
175 2dg1_A DRP35, lactonase; beta 99.1 1.1E-08 3.6E-13 90.1 21.4 161 152-341 35-211 (333)
176 3no2_A Uncharacterized protein 99.1 1E-08 3.5E-13 87.8 20.6 161 149-341 23-193 (276)
177 1xip_A Nucleoporin NUP159; bet 99.1 1.5E-09 5E-14 97.0 15.7 128 159-324 86-224 (388)
178 2bkl_A Prolyl endopeptidase; m 99.1 4.7E-09 1.6E-13 102.1 19.8 158 159-343 118-304 (695)
179 1q7f_A NHL, brain tumor CG1071 99.0 4.2E-08 1.4E-12 84.2 20.7 151 160-341 75-236 (286)
180 2xdw_A Prolyl endopeptidase; a 99.0 2.3E-08 7.9E-13 97.4 20.9 158 164-341 173-366 (710)
181 2gop_A Trilobed protease; beta 99.0 1.2E-08 4E-13 90.2 16.7 136 164-340 106-290 (347)
182 2oiz_A Aromatic amine dehydrog 99.0 4.6E-08 1.6E-12 87.3 18.3 60 262-324 297-358 (361)
183 1xip_A Nucleoporin NUP159; bet 98.9 5.7E-09 2E-13 93.1 11.9 139 163-341 39-189 (388)
184 1qks_A Cytochrome CD1 nitrite 98.9 7.5E-07 2.6E-11 84.0 26.5 161 148-311 184-382 (567)
185 1yr2_A Prolyl oligopeptidase; 98.9 2.1E-08 7E-13 98.3 16.3 135 160-318 161-321 (741)
186 3no2_A Uncharacterized protein 98.9 1E-07 3.5E-12 81.6 18.7 133 172-341 4-153 (276)
187 3e5z_A Putative gluconolactona 98.9 9.5E-08 3.2E-12 82.5 17.5 159 154-341 20-200 (296)
188 2gop_A Trilobed protease; beta 98.9 9.8E-08 3.4E-12 84.2 17.6 100 162-292 59-190 (347)
189 3c5m_A Oligogalacturonate lyas 98.9 4E-08 1.4E-12 88.2 15.3 126 157-313 183-339 (396)
190 2dg1_A DRP35, lactonase; beta 98.9 3.7E-07 1.3E-11 80.1 20.8 154 158-341 83-261 (333)
191 3dsm_A Uncharacterized protein 98.9 1.7E-07 5.7E-12 82.4 18.3 165 149-345 72-255 (328)
192 3c5m_A Oligogalacturonate lyas 98.9 4.3E-09 1.5E-13 94.6 8.0 151 164-344 83-274 (396)
193 2bkl_A Prolyl endopeptidase; m 98.8 6.6E-08 2.3E-12 94.0 16.5 149 165-341 171-349 (695)
194 1rwi_B Serine/threonine-protei 98.8 2E-07 6.8E-12 79.1 16.6 151 161-337 107-260 (270)
195 3g4e_A Regucalcin; six bladed 98.8 8.1E-07 2.8E-11 76.8 19.5 141 162-324 98-251 (297)
196 3iuj_A Prolyl endopeptidase; h 98.8 1.6E-07 5.4E-12 91.3 16.0 135 159-317 126-284 (693)
197 1qks_A Cytochrome CD1 nitrite 98.8 4.2E-07 1.4E-11 85.7 18.1 143 170-342 164-328 (567)
198 1rwi_B Serine/threonine-protei 98.7 4.2E-07 1.4E-11 77.1 15.7 152 160-341 65-220 (270)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 8.6E-07 2.9E-11 76.9 17.5 155 162-341 117-297 (314)
200 1yr2_A Prolyl oligopeptidase; 98.6 2.8E-06 9.7E-11 83.1 20.5 152 164-341 211-393 (741)
201 3dsm_A Uncharacterized protein 98.6 2.9E-06 9.9E-11 74.4 18.2 120 162-311 44-170 (328)
202 2z2n_A Virginiamycin B lyase; 98.6 1.2E-05 4E-10 68.9 21.8 153 157-341 10-169 (299)
203 2z2n_A Virginiamycin B lyase; 98.6 2E-05 6.8E-10 67.4 23.2 151 160-341 55-211 (299)
204 3hrp_A Uncharacterized protein 98.6 1.3E-05 4.4E-10 72.6 22.7 151 162-337 131-294 (409)
205 2hz6_A Endoplasmic reticulum t 98.6 6.9E-09 2.3E-13 92.9 0.2 140 172-345 8-151 (369)
206 3sjl_D Methylamine dehydrogena 98.6 1.8E-06 6.2E-11 76.8 15.6 144 168-343 39-208 (386)
207 1uuj_A Platelet-activating fac 98.6 5.2E-09 1.8E-13 69.9 -0.6 76 10-93 4-81 (88)
208 2mad_H Methylamine dehydrogena 98.6 4.7E-06 1.6E-10 74.5 18.4 136 169-341 28-194 (373)
209 2mad_H Methylamine dehydrogena 98.6 5E-05 1.7E-09 67.8 25.0 89 149-240 55-162 (373)
210 2hz6_A Endoplasmic reticulum t 98.5 8E-09 2.7E-13 92.5 -2.5 156 150-345 28-194 (369)
211 3g4e_A Regucalcin; six bladed 98.5 7.1E-05 2.4E-09 64.4 22.6 154 160-343 52-229 (297)
212 1pjx_A Dfpase, DIISOPROPYLFLUO 98.4 1.1E-05 3.9E-10 69.7 16.5 118 159-302 169-299 (314)
213 1mda_H Methylamine dehydrogena 98.4 1.1E-05 3.9E-10 71.6 16.3 87 146-234 51-158 (368)
214 2ghs_A AGR_C_1268P; regucalcin 98.4 4.2E-05 1.4E-09 66.9 18.9 139 162-324 134-281 (326)
215 2ghs_A AGR_C_1268P; regucalcin 98.3 0.00011 3.6E-09 64.3 20.9 150 161-341 89-258 (326)
216 3hrp_A Uncharacterized protein 98.3 5.4E-05 1.8E-09 68.5 19.2 139 160-312 217-363 (409)
217 3sjl_D Methylamine dehydrogena 98.3 1.7E-05 5.8E-10 70.5 15.1 162 147-341 65-254 (386)
218 2qc5_A Streptogramin B lactona 98.3 0.00019 6.4E-09 61.3 21.3 153 159-341 17-174 (300)
219 3dr2_A Exported gluconolactona 98.3 4.7E-05 1.6E-09 65.8 17.2 121 155-304 79-226 (305)
220 2qc5_A Streptogramin B lactona 98.3 0.0004 1.4E-08 59.2 22.9 152 159-341 59-216 (300)
221 3dr2_A Exported gluconolactona 98.3 2.3E-05 7.9E-10 67.8 14.6 159 153-341 36-222 (305)
222 2qe8_A Uncharacterized protein 98.2 3.7E-05 1.3E-09 67.7 14.8 124 162-312 17-164 (343)
223 2qe8_A Uncharacterized protein 98.2 3.3E-05 1.1E-09 68.1 14.2 138 159-299 64-223 (343)
224 1yiq_A Quinohemoprotein alcoho 98.2 0.00013 4.3E-09 70.7 19.4 172 166-346 239-508 (689)
225 3c75_H MADH, methylamine dehyd 98.2 3.7E-05 1.3E-09 69.5 14.5 113 171-311 82-218 (426)
226 2iwa_A Glutamine cyclotransfer 98.2 0.00031 1.1E-08 59.1 19.0 163 151-346 9-184 (266)
227 3iuj_A Prolyl endopeptidase; h 98.2 0.00014 4.6E-09 70.6 19.1 148 165-341 178-357 (693)
228 3c75_H MADH, methylamine dehyd 98.1 0.00014 4.9E-09 65.6 17.2 89 148-238 106-213 (426)
229 3nol_A Glutamine cyclotransfer 98.1 0.0004 1.4E-08 57.9 17.5 163 151-346 31-204 (262)
230 1kb0_A Quinohemoprotein alcoho 98.0 0.0003 1E-08 67.9 18.3 173 165-345 246-509 (677)
231 1kb0_A Quinohemoprotein alcoho 98.0 0.00018 6E-09 69.5 15.5 119 168-313 319-518 (677)
232 3mbr_X Glutamine cyclotransfer 97.9 0.0023 7.8E-08 52.8 19.6 161 152-346 10-182 (243)
233 3nok_A Glutaminyl cyclase; bet 97.9 0.00086 2.9E-08 55.9 16.5 162 152-346 44-213 (268)
234 2xe4_A Oligopeptidase B; hydro 97.9 0.00058 2E-08 66.8 17.9 114 163-303 175-305 (751)
235 1yiq_A Quinohemoprotein alcoho 97.9 0.00045 1.6E-08 66.8 16.6 36 278-313 481-516 (689)
236 1mda_H Methylamine dehydrogena 97.8 0.00023 7.7E-09 63.2 12.4 96 184-310 47-163 (368)
237 2ece_A 462AA long hypothetical 97.8 0.0012 4.1E-08 59.5 16.7 141 149-310 172-363 (462)
238 3q7m_A Lipoprotein YFGL, BAMB; 97.7 0.0022 7.5E-08 56.9 18.0 137 173-345 53-209 (376)
239 2ece_A 462AA long hypothetical 97.7 0.0084 2.9E-07 54.0 21.4 141 136-303 103-290 (462)
240 3hxj_A Pyrrolo-quinoline quino 97.7 0.0022 7.4E-08 55.5 16.3 153 151-337 126-280 (330)
241 3q7m_A Lipoprotein YFGL, BAMB; 97.6 0.0092 3.1E-07 52.8 20.5 114 172-310 102-215 (376)
242 3hxj_A Pyrrolo-quinoline quino 97.6 0.0019 6.5E-08 55.9 15.6 148 151-337 166-320 (330)
243 1npe_A Nidogen, entactin; glyc 97.6 0.016 5.4E-07 48.6 20.8 148 162-337 36-194 (267)
244 1npe_A Nidogen, entactin; glyc 97.5 0.029 1E-06 46.9 24.4 151 162-342 79-237 (267)
245 1kv9_A Type II quinohemoprotei 97.5 0.0038 1.3E-07 60.1 17.0 73 166-238 234-337 (668)
246 1fwx_A Nitrous oxide reductase 97.4 0.01 3.5E-07 55.4 17.9 191 141-340 114-360 (595)
247 2fp8_A Strictosidine synthase; 97.4 0.028 9.6E-07 48.5 19.9 154 159-338 16-213 (322)
248 2iwa_A Glutamine cyclotransfer 97.4 0.01 3.6E-07 49.7 16.3 132 150-311 53-190 (266)
249 1fwx_A Nitrous oxide reductase 97.2 0.0038 1.3E-07 58.2 12.7 146 152-314 186-383 (595)
250 2fp8_A Strictosidine synthase; 97.2 0.027 9.2E-07 48.6 17.7 149 162-337 126-309 (322)
251 1kv9_A Type II quinohemoprotei 97.2 0.0085 2.9E-07 57.7 15.0 35 279-313 465-499 (668)
252 3nol_A Glutamine cyclotransfer 97.1 0.027 9.3E-07 46.8 15.7 115 195-346 33-158 (262)
253 2ad6_A Methanol dehydrogenase 97.1 0.042 1.4E-06 51.7 19.1 72 167-239 240-340 (571)
254 3nok_A Glutaminyl cyclase; bet 97.1 0.023 7.9E-07 47.3 15.0 131 148-311 82-219 (268)
255 1flg_A Protein (quinoprotein e 97.1 0.036 1.2E-06 52.3 18.2 73 166-239 250-360 (582)
256 2ad6_A Methanol dehydrogenase 97.0 0.017 5.8E-07 54.4 15.5 31 282-312 474-504 (571)
257 1w6s_A Methanol dehydrogenase 97.0 0.063 2.2E-06 50.8 19.0 73 166-239 245-347 (599)
258 2p4o_A Hypothetical protein; p 97.0 0.1 3.4E-06 44.6 19.0 124 152-303 23-148 (306)
259 3mbr_X Glutamine cyclotransfer 97.0 0.074 2.5E-06 43.7 16.8 107 174-310 76-187 (243)
260 3qqz_A Putative uncharacterize 96.9 0.077 2.6E-06 44.1 16.8 127 155-301 20-150 (255)
261 2xe4_A Oligopeptidase B; hydro 96.8 0.027 9.1E-07 55.1 15.3 70 165-234 224-304 (751)
262 3pbp_A Nucleoporin NUP82; beta 96.7 0.052 1.8E-06 48.4 14.8 118 163-297 67-207 (452)
263 1flg_A Protein (quinoprotein e 96.7 0.011 3.6E-07 56.0 11.1 33 282-314 496-528 (582)
264 1w6s_A Methanol dehydrogenase 96.7 0.075 2.6E-06 50.3 16.8 32 282-313 483-514 (599)
265 3tc9_A Hypothetical hydrolase; 96.7 0.11 3.8E-06 46.9 17.4 151 163-340 138-300 (430)
266 3v64_C Agrin; beta propeller, 96.6 0.25 8.6E-06 43.2 18.6 114 162-302 116-234 (349)
267 4a2l_A BT_4663, two-component 96.6 0.38 1.3E-05 47.1 21.8 116 161-306 356-484 (795)
268 3v65_B Low-density lipoprotein 96.4 0.44 1.5E-05 42.2 20.2 154 160-340 114-276 (386)
269 3v64_C Agrin; beta propeller, 96.4 0.46 1.6E-05 41.4 20.9 153 161-340 72-233 (349)
270 4a2l_A BT_4663, two-component 96.2 0.65 2.2E-05 45.5 20.9 121 161-305 405-529 (795)
271 2p9w_A MAL S 1 allergenic prot 96.2 0.1 3.5E-06 45.0 13.1 119 164-303 65-216 (334)
272 1ijq_A LDL receptor, low-densi 96.2 0.54 1.9E-05 40.3 21.4 153 161-340 29-194 (316)
273 4hw6_A Hypothetical protein, I 96.0 0.52 1.8E-05 42.5 17.8 153 162-341 139-304 (433)
274 3tc9_A Hypothetical hydrolase; 96.0 0.15 5.2E-06 46.0 14.0 116 159-301 176-300 (430)
275 3amr_A 3-phytase; beta-propell 95.9 0.63 2.1E-05 40.5 16.8 137 172-341 39-208 (355)
276 3p5b_L Low density lipoprotein 95.9 0.87 3E-05 40.5 21.5 118 159-302 109-234 (400)
277 3v65_B Low-density lipoprotein 95.8 0.94 3.2E-05 40.1 20.1 149 162-337 159-314 (386)
278 1k3i_A Galactose oxidase precu 95.7 0.17 5.9E-06 48.4 13.8 116 166-306 190-327 (656)
279 3m0c_C LDL receptor, low-densi 95.7 1.8 6.1E-05 42.4 21.4 122 160-309 422-552 (791)
280 2p4o_A Hypothetical protein; p 95.6 0.88 3E-05 38.6 17.0 84 194-306 23-108 (306)
281 3qqz_A Putative uncharacterize 95.5 0.58 2E-05 38.8 14.5 113 161-301 120-252 (255)
282 3v9f_A Two-component system se 95.1 1.3 4.3E-05 43.3 18.1 120 161-305 406-527 (781)
283 3p5b_L Low density lipoprotein 95.1 1.7 5.9E-05 38.6 26.4 116 160-302 157-277 (400)
284 3amr_A 3-phytase; beta-propell 95.0 1.6 5.5E-05 37.9 19.5 172 150-354 58-271 (355)
285 3v9f_A Two-component system se 94.9 1.8 6.3E-05 42.2 18.5 114 161-305 449-571 (781)
286 2p9w_A MAL S 1 allergenic prot 94.8 1.7 5.9E-05 37.3 15.9 165 157-341 8-213 (334)
287 1k3i_A Galactose oxidase precu 94.8 0.94 3.2E-05 43.3 15.9 93 143-235 223-324 (656)
288 2ism_A Putative oxidoreductase 94.8 1.6 5.5E-05 38.0 16.2 71 160-233 29-113 (352)
289 3m0c_C LDL receptor, low-densi 94.4 4.2 0.00014 39.8 25.4 116 160-302 469-589 (791)
290 1cru_A Protein (soluble quinop 94.3 2.1 7.1E-05 38.8 16.1 55 160-214 25-87 (454)
291 1tl2_A L10, protein (tachylect 94.2 0.16 5.6E-06 40.9 7.5 112 162-299 41-160 (236)
292 1ijq_A LDL receptor, low-densi 94.2 2.4 8.2E-05 36.2 24.6 154 162-345 77-240 (316)
293 2xbg_A YCF48-like protein; pho 94.2 2.5 8.4E-05 36.3 19.4 151 159-337 160-318 (327)
294 3pbp_A Nucleoporin NUP82; beta 93.9 2.2 7.6E-05 38.1 14.8 116 171-302 30-158 (452)
295 4hw6_A Hypothetical protein, I 93.9 0.91 3.1E-05 40.9 13.0 140 162-310 228-380 (433)
296 1n7d_A LDL receptor, low-densi 93.8 0.57 1.9E-05 45.2 11.9 143 164-341 455-612 (699)
297 4gq2_M Nucleoporin NUP120; bet 93.4 0.95 3.2E-05 45.3 13.2 39 272-310 236-274 (950)
298 3sov_A LRP-6, low-density lipo 93.2 3.7 0.00013 35.1 23.6 154 162-345 79-240 (318)
299 3kya_A Putative phosphatase; s 92.6 4 0.00014 37.4 15.0 115 163-301 140-277 (496)
300 3a9g_A Putative uncharacterize 92.5 2.8 9.6E-05 36.5 13.5 72 160-233 27-113 (354)
301 3das_A Putative oxidoreductase 92.4 5 0.00017 34.8 16.7 80 153-232 23-114 (347)
302 4gq2_M Nucleoporin NUP120; bet 92.0 9.1 0.00031 38.3 17.9 36 205-240 237-272 (950)
303 3sre_A PON1, serum paraoxonase 91.8 6.1 0.00021 34.4 15.6 135 149-310 151-308 (355)
304 2be1_A Serine/threonine-protei 91.3 0.38 1.3E-05 41.7 6.4 116 174-311 11-139 (339)
305 3s94_A LRP-6, low-density lipo 91.2 10 0.00035 35.8 19.2 115 160-301 38-158 (619)
306 3kya_A Putative phosphatase; s 90.6 4.6 0.00016 37.0 13.1 122 163-300 187-339 (496)
307 2g8s_A Glucose/sorbosone dehyd 90.6 3.3 0.00011 36.0 11.9 53 161-214 17-76 (353)
308 3sbq_A Nitrous-oxide reductase 90.6 4.2 0.00014 37.7 12.5 153 163-337 324-510 (638)
309 3sov_A LRP-6, low-density lipo 90.5 7.6 0.00026 33.1 20.2 125 159-311 119-247 (318)
310 4a0p_A LRP6, LRP-6, low-densit 90.4 12 0.00042 35.4 23.9 155 161-346 388-552 (628)
311 2xzh_A Clathrin heavy chain 1; 89.8 9 0.00031 33.0 18.9 148 151-317 137-305 (365)
312 2xn4_A Kelch-like protein 2; s 89.7 8.1 0.00028 32.3 15.0 24 282-305 204-232 (302)
313 1n7d_A LDL receptor, low-densi 89.1 0.83 2.8E-05 44.1 7.3 121 162-311 496-623 (699)
314 2vpj_A Kelch-like protein 12; 88.7 6.7 0.00023 32.8 12.2 89 143-235 132-232 (301)
315 3ei3_A DNA damage-binding prot 88.0 26 0.00088 35.9 19.6 132 184-343 493-638 (1158)
316 4a0p_A LRP6, LRP-6, low-densit 87.9 19 0.00063 34.1 22.6 155 162-346 80-240 (628)
317 1bpo_A Protein (clathrin); cla 87.4 16 0.00055 32.8 20.3 149 150-317 135-304 (494)
318 2vpj_A Kelch-like protein 12; 87.3 12 0.0004 31.2 16.4 107 172-306 112-235 (301)
319 2xn4_A Kelch-like protein 2; s 87.1 6.7 0.00023 32.8 11.2 88 144-235 129-230 (302)
320 3f7f_A Nucleoporin NUP120; nuc 86.6 3 0.0001 39.9 9.1 37 273-311 223-259 (729)
321 1dh3_A Transcription factor CR 85.5 2.6 9E-05 25.4 5.4 37 50-86 16-52 (55)
322 1zgk_A Kelch-like ECH-associat 85.3 15 0.00053 30.7 14.2 106 172-305 121-243 (308)
323 2oxj_A Hybrid alpha/beta pepti 84.7 2.4 8.2E-05 22.2 4.1 29 58-86 3-31 (34)
324 3ii7_A Kelch-like protein 7; p 84.4 13 0.00044 31.1 11.6 62 172-235 55-128 (306)
325 3ii7_A Kelch-like protein 7; p 84.2 17 0.00058 30.3 14.6 88 144-235 75-179 (306)
326 4fhn_B Nucleoporin NUP120; pro 84.0 1.8 6.3E-05 44.3 7.0 38 273-310 239-276 (1139)
327 2dgc_A Protein (GCN4); basic d 83.5 3.4 0.00012 25.7 5.5 37 50-86 24-60 (63)
328 3m48_A General control protein 83.5 2.1 7E-05 22.3 3.6 28 59-86 3-30 (33)
329 1jnm_A Proto-oncogene C-JUN; B 83.3 3.2 0.00011 25.7 5.3 41 50-90 16-56 (62)
330 1t2k_D Cyclic-AMP-dependent tr 82.7 2.3 8E-05 26.2 4.5 40 50-89 16-55 (61)
331 1ci6_A Transcription factor AT 82.7 2.2 7.5E-05 26.6 4.4 41 50-90 17-57 (63)
332 1xi4_A Clathrin heavy chain; a 82.4 15 0.00051 38.4 12.4 130 162-310 151-297 (1630)
333 2wt7_A Proto-oncogene protein 81.8 2.6 8.9E-05 26.2 4.5 40 50-89 17-56 (63)
334 3s94_A LRP-6, low-density lipo 81.7 36 0.0012 32.1 21.7 115 161-302 83-202 (619)
335 4asc_A Kelch repeat and BTB do 81.5 17 0.00059 30.5 11.4 62 172-235 148-222 (315)
336 1zgk_A Kelch-like ECH-associat 81.4 17 0.00057 30.5 11.2 62 172-235 168-241 (308)
337 2xz2_A CSTF-50, isoform B; RNA 80.4 0.05 1.7E-06 33.7 -3.6 35 10-44 12-46 (66)
338 2xzh_A Clathrin heavy chain 1; 80.2 28 0.00096 30.0 17.1 116 167-312 72-198 (365)
339 2wg3_C Hedgehog-interacting pr 80.1 34 0.0012 30.9 15.1 55 160-214 12-79 (463)
340 3c3g_A Alpha/beta peptide with 79.5 4.9 0.00017 20.9 4.1 28 59-86 3-30 (33)
341 3sbq_A Nitrous-oxide reductase 79.5 6.8 0.00023 36.3 8.1 96 204-313 323-429 (638)
342 2l5g_B Putative uncharacterize 79.0 6.3 0.00022 21.9 4.8 32 54-85 7-38 (42)
343 4asc_A Kelch repeat and BTB do 79.0 17 0.00059 30.5 10.5 24 282-305 196-224 (315)
344 2akf_A Coronin-1A; coiled coil 78.4 4.5 0.00015 20.3 3.7 25 61-85 4-28 (32)
345 1bpo_A Protein (clathrin); cla 77.8 40 0.0014 30.4 15.3 117 166-312 70-197 (494)
346 2wuj_A Septum site-determining 77.8 3.7 0.00013 24.9 4.2 33 53-85 24-56 (57)
347 1kd8_B GABH BLL, GCN4 acid bas 77.2 4.9 0.00017 21.3 3.8 30 58-87 3-32 (36)
348 3c3f_A Alpha/beta peptide with 76.7 6.3 0.00021 20.6 4.1 29 58-86 3-31 (34)
349 2zwa_A Leucine carboxyl methyl 76.6 17 0.00058 34.9 10.6 63 172-235 451-523 (695)
350 1gu4_A CAAT/enhancer binding p 75.1 7 0.00024 25.4 5.1 42 52-93 32-73 (78)
351 1kd8_A GABH AIV, GCN4 acid bas 74.9 5.6 0.00019 21.1 3.6 28 59-86 4-31 (36)
352 1hjb_A Ccaat/enhancer binding 74.6 5.4 0.00019 26.6 4.6 42 52-93 32-73 (87)
353 1tl2_A L10, protein (tachylect 74.6 32 0.0011 27.7 12.4 61 164-228 90-157 (236)
354 2woz_A Kelch repeat and BTB do 74.0 30 0.001 29.0 10.7 62 172-235 158-232 (318)
355 2woz_A Kelch repeat and BTB do 73.6 31 0.0011 28.9 10.6 62 172-235 109-185 (318)
356 2wq1_A General control protein 73.3 7.8 0.00027 20.1 4.1 28 59-86 3-30 (33)
357 2bni_A General control protein 73.3 5.8 0.0002 20.8 3.4 28 59-86 4-31 (34)
358 3he5_A Synzip1; heterodimeric 73.2 6.5 0.00022 21.4 3.8 22 57-78 4-25 (49)
359 3sre_A PON1, serum paraoxonase 71.9 49 0.0017 28.6 18.3 72 164-235 52-149 (355)
360 1uo4_A General control protein 71.5 9.1 0.00031 20.1 4.1 28 59-86 4-31 (34)
361 2yy0_A C-MYC-binding protein; 70.9 6.1 0.00021 23.5 3.8 27 49-75 19-45 (53)
362 3twe_A Alpha4H; unknown functi 70.5 5.5 0.00019 18.8 2.7 20 66-85 4-23 (27)
363 2ism_A Putative oxidoreductase 70.5 32 0.0011 29.6 10.1 74 203-303 30-115 (352)
364 1p9i_A Cortexillin I/GCN4 hybr 69.9 7.9 0.00027 18.9 3.3 22 63-84 6-27 (31)
365 2hy6_A General control protein 69.5 9.7 0.00033 19.9 3.7 27 59-85 4-30 (34)
366 1g6u_A Domain swapped dimer; d 68.0 4.5 0.00015 21.9 2.4 21 61-81 25-45 (48)
367 2xbg_A YCF48-like protein; pho 67.4 56 0.0019 27.6 20.6 111 160-299 120-231 (327)
368 1fmh_A General control protein 65.4 11 0.00038 18.7 4.3 27 59-85 4-30 (33)
369 3a9g_A Putative uncharacterize 65.3 50 0.0017 28.4 10.3 74 203-303 28-115 (354)
370 1gd2_E Transcription factor PA 64.3 11 0.00036 24.0 4.1 40 50-89 23-62 (70)
371 3s25_A Hypothetical 7-bladed b 63.2 67 0.0023 26.9 12.6 59 168-231 59-133 (302)
372 4fhn_B Nucleoporin NUP120; pro 62.8 7.3 0.00025 39.9 4.9 38 163-200 239-276 (1139)
373 3f7f_A Nucleoporin NUP120; nuc 62.7 15 0.00051 35.2 6.6 37 163-201 223-259 (729)
374 2be1_A Serine/threonine-protei 62.0 18 0.00063 31.1 6.6 22 216-237 11-32 (339)
375 2uvk_A YJHT; unknown function, 61.1 76 0.0026 26.9 12.8 12 183-194 168-179 (357)
376 2uvk_A YJHT; unknown function, 58.0 75 0.0026 26.9 10.1 28 282-309 316-349 (357)
377 4a9v_A PHOX; hydrolase, beta-p 57.4 68 0.0023 29.9 9.8 60 162-221 476-548 (592)
378 2r2v_A GCN4 leucine zipper; co 57.4 19 0.00065 18.8 3.9 27 59-85 4-30 (34)
379 2oqq_A Transcription factor HY 55.2 25 0.00085 19.5 5.1 26 59-84 6-31 (42)
380 3zwu_A Alkaline phosphatase PH 54.6 56 0.0019 30.6 8.9 58 164-221 478-548 (592)
381 3nmd_A CGMP dependent protein 53.7 35 0.0012 21.7 5.0 25 58-82 42-66 (72)
382 2zwa_A Leucine carboxyl methyl 53.6 74 0.0025 30.4 10.0 65 171-235 499-578 (695)
383 2yy0_A C-MYC-binding protein; 53.1 25 0.00085 20.8 4.1 27 63-89 19-45 (53)
384 3nmd_A CGMP dependent protein 52.1 37 0.0013 21.6 5.0 44 53-96 23-66 (72)
385 3das_A Putative oxidoreductase 49.8 1.2E+02 0.0043 26.0 10.9 37 198-234 26-62 (347)
386 3qhy_B Beta-lactamase inhibito 46.7 1.2E+02 0.004 25.1 9.1 61 272-337 180-242 (282)
387 1xi4_A Clathrin heavy chain; a 45.3 53 0.0018 34.5 7.6 106 168-302 72-188 (1630)
388 3qhy_B Beta-lactamase inhibito 45.2 1.3E+02 0.0044 24.8 9.4 67 162-234 63-129 (282)
389 1cru_A Protein (soluble quinop 42.7 1.8E+02 0.0063 25.9 13.8 32 202-233 25-56 (454)
390 3a7p_A Autophagy protein 16; c 42.0 25 0.00087 26.0 3.5 13 2-14 21-33 (152)
391 2pnv_A Small conductance calci 41.8 46 0.0016 18.7 4.6 32 54-85 7-38 (43)
392 1deb_A APC protein, adenomatou 41.6 38 0.0013 19.5 3.4 25 59-83 6-30 (54)
393 3ott_A Two-component system se 40.3 2.5E+02 0.0086 26.8 16.3 111 162-304 146-262 (758)
394 1nlw_A MAD protein, MAX dimeri 36.9 59 0.002 21.1 4.4 36 51-86 42-77 (80)
395 1nkp_A C-MYC, MYC proto-oncoge 36.5 74 0.0025 21.1 5.0 22 61-82 64-85 (88)
396 1qp6_A Protein (alpha2D); de n 34.3 47 0.0016 16.7 3.3 23 60-82 5-32 (35)
397 3ei3_A DNA damage-binding prot 33.8 4.1E+02 0.014 27.2 18.5 72 161-232 553-634 (1158)
398 3s9g_A Protein hexim1; cyclin 33.2 80 0.0027 21.2 4.5 26 52-77 33-58 (104)
399 1gd2_E Transcription factor PA 32.2 92 0.0031 19.6 4.6 32 54-85 34-65 (70)
400 3he4_A Synzip6; heterodimeric 31.4 71 0.0024 17.8 5.1 35 50-84 18-52 (56)
401 1hjb_A Ccaat/enhancer binding 31.0 98 0.0033 20.5 4.7 35 54-88 41-75 (87)
402 1go4_E MAD1 (mitotic arrest de 30.8 69 0.0024 21.8 4.1 29 60-88 16-44 (100)
403 1gmj_A ATPase inhibitor; coile 30.0 1.2E+02 0.004 19.9 5.1 27 54-80 42-68 (84)
404 1t6f_A Geminin; coiled-coil, c 29.8 67 0.0023 17.0 4.4 14 65-78 16-29 (37)
405 1gu4_A CAAT/enhancer binding p 28.7 1.2E+02 0.0041 19.6 4.9 33 54-86 41-73 (78)
406 1gk7_A Vimentin; intermediate 28.4 78 0.0027 17.3 3.9 30 51-80 8-37 (39)
407 2zxx_A Geminin; coiled-coil, c 28.2 1.2E+02 0.0042 19.6 4.8 6 67-72 52-57 (79)
408 3lay_A Zinc resistance-associa 28.0 1.4E+02 0.0046 22.8 5.8 38 46-83 68-105 (175)
409 3ott_A Two-component system se 27.4 4.1E+02 0.014 25.3 17.7 114 163-305 473-589 (758)
410 4a9v_A PHOX; hydrolase, beta-p 27.0 3.3E+02 0.011 25.4 9.1 20 271-290 530-549 (592)
411 2jo8_A Serine/threonine-protei 26.4 1E+02 0.0035 18.0 5.6 34 49-82 14-47 (51)
412 3fx7_A Putative uncharacterize 26.4 91 0.0031 21.0 4.0 20 47-66 43-62 (94)
413 3iv1_A Tumor susceptibility ge 26.0 1.4E+02 0.0047 19.3 5.4 25 49-73 11-35 (78)
414 2wg5_A General control protein 25.2 61 0.0021 22.5 3.2 35 58-92 9-43 (109)
415 1nkp_B MAX protein, MYC proto- 25.0 1.4E+02 0.0049 19.2 6.4 34 53-86 44-77 (83)
416 3he5_B Synzip2; heterodimeric 24.9 94 0.0032 17.1 5.1 27 59-85 20-46 (52)
417 1nlw_A MAD protein, MAX dimeri 24.8 1.4E+02 0.005 19.2 4.9 33 49-81 47-79 (80)
418 4emc_A Monopolin complex subun 24.1 1.5E+02 0.0052 22.7 5.3 37 50-86 21-57 (190)
419 2g8s_A Glucose/sorbosone dehyd 23.3 3.4E+02 0.012 23.0 9.9 60 162-221 271-340 (353)
420 3ra3_A P1C; coiled coil domain 23.2 72 0.0025 15.1 3.2 16 70-85 7-22 (28)
421 3b7f_A Glycosyl hydrolase, BNR 23.1 3.5E+02 0.012 23.1 10.9 67 162-230 55-143 (394)
422 1t2k_D Cyclic-AMP-dependent tr 22.5 1.4E+02 0.0046 18.0 5.5 33 53-85 26-58 (61)
423 1zxa_A CGMP-dependent protein 22.1 1.5E+02 0.0052 18.5 5.0 32 55-86 24-55 (67)
424 3ljm_A Coil Ser L9C; de novo d 21.4 85 0.0029 15.3 3.9 15 68-82 13-27 (31)
425 1a93_B MAX protein, coiled coi 21.0 1.1E+02 0.0036 16.2 4.1 21 60-80 11-31 (34)
426 3zwu_A Alkaline phosphatase PH 20.4 4E+02 0.014 24.9 8.5 19 271-289 530-548 (592)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-35 Score=271.90 Aligned_cols=305 Identities=19% Similarity=0.199 Sum_probs=166.1
Q ss_pred ccccc--cccccceeecccchhhhHHHhhcCCcCCcccCChhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhcc
Q psy8430 10 KSTKH--KRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLD 87 (361)
Q Consensus 10 ~~~~~--~~~~~~~~~~l~~~~~~~~~~~L~~e~~~~~~~~~~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~ 87 (361)
+||+| ++++|+|++||.++++.+.++.|++|.+.. ++++..+. +...++..+.+..++|+++.+++.+..
T Consensus 2 ~~~~~q~~~~~~~i~~~l~~~~~~~~~~~~~~e~~~~-~~~~~~~~-------~~~~~~~~w~~~~~l~~~~~~~~~~~~ 73 (410)
T 1vyh_C 2 VLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELD-MNEELDKK-------YAGLLEKKWTSVIRLQKKVMELESKLN 73 (410)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHhCCC-CCcchhhh-------hhchhhhhhhheeeHHHHHHHHHHHHH
Confidence 57777 999999999999999999999999887622 22222222 344456667777778888877766544
Q ss_pred ccccccccCCCCCCchhhhccccCcccccccccCCCccccce----------eeeeeeccceeEEeeecCccceeeeEEe
Q psy8430 88 RESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKT----------TNKLKVQTSKIVSSFKTSLLSCYKIRSF 157 (361)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l 157 (361)
....+..... +...... .....+.. ............ .....+..+..+..|.. .+++.++++
T Consensus 74 ~~~~~~~~~~---~~~~~~~-~~~~~~~~-~~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~--~~~~~~~~l 146 (410)
T 1vyh_C 74 EAKEEFTSGG---PLGQKRD-PKEWIPRP-PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDY--ETGDFERTL 146 (410)
T ss_dssp ----------------------CCCCCCS-SCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEET--TTCCCCEEE
T ss_pred HHHHHHhccC---CccccCC-ccccccCC-CceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC--CCCcEEEEE
Confidence 3322111000 0000000 00000000 000000000000 11122222333444433 456778899
Q ss_pred eccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccccc
Q psy8430 158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 237 (361)
Q Consensus 158 ~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~ 237 (361)
.+|.+.|++++|+|++.+|++|+.|++|++||+.+++++..+.+|...|.+++|+|+++.|++|+.|++|++||+.++
T Consensus 147 ~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~-- 224 (410)
T 1vyh_C 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG-- 224 (410)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC--
T ss_pred eccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999766
Q ss_pred ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCe
Q psy8430 238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPH 317 (361)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~ 317 (361)
.++..+.+|...|.++.|+|++.++++|+.|+.|++||++++++...+.+|...|.
T Consensus 225 ------------------------~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~ 280 (410)
T 1vyh_C 225 ------------------------YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVE 280 (410)
T ss_dssp ------------------------CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred ------------------------cEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEE
Confidence 25677889999999999999999999999999999999999999999999998888
Q ss_pred EEEEEcC-----------------------CCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 318 ILCVSSY-----------------------YSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 318 ~~~~s~s-----------------------~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
++.+++. .+..+.||.|++| |+ +. ..++..+.||...|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iw--d~---~~-~~~~~~~~~h~~~v 341 (410)
T 1vyh_C 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW--DV---ST-GMCLMTLVGHDNWV 341 (410)
T ss_dssp EEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEE--ET---TT-TEEEEEEECCSSCE
T ss_pred EEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEE--EC---CC-CceEEEEECCCCcE
Confidence 7544431 0012389999999 87 44 56788899998753
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=4.6e-29 Score=219.01 Aligned_cols=163 Identities=17% Similarity=0.252 Sum_probs=145.7
Q ss_pred eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231 (361)
Q Consensus 152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd 231 (361)
+..++|.+|.+.|++++|+|++++|++|+.||+|++||+.++..+..+..|..+|.+++|+|++++|++|+.|++|++||
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC-eEEEEee
Q psy8430 232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-TILQSLT 310 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~ 310 (361)
+.++ ..+..+.+|...|.+++|+|+++++++|+.|++|++||++++ .+...+.
T Consensus 84 ~~~~--------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~ 137 (304)
T 2ynn_A 84 YNTG--------------------------EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE 137 (304)
T ss_dssp TTTC--------------------------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEEC
T ss_pred CCCC--------------------------cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhc
Confidence 8766 356788899999999999999999999999999999999987 5567888
Q ss_pred cCCCCCeEEEEEcC----CCcccCCCeEEEEcCCCC
Q psy8430 311 GHDEEPHILCVSSY----YSKVSCDLFQRIQHLDCG 342 (361)
Q Consensus 311 ~h~~~v~~~~~s~s----~~~v~~dg~i~iW~~d~~ 342 (361)
+|...|.++.+++. ++..+.||.|++| |++
T Consensus 138 ~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iw--d~~ 171 (304)
T 2ynn_A 138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVW--SLG 171 (304)
T ss_dssp CCCSCEEEEEECTTCTTEEEEEETTSEEEEE--ETT
T ss_pred ccCCcEEEEEECCCCCCEEEEEeCCCeEEEE--ECC
Confidence 99999988655542 1123499999999 773
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=1.1e-28 Score=216.69 Aligned_cols=190 Identities=21% Similarity=0.278 Sum_probs=161.1
Q ss_pred eeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec
Q psy8430 134 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213 (361)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~ 213 (361)
.+..+..+..|.. .++..++.+.+|..+|.+++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|
T Consensus 30 s~~~dg~v~lWd~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~ 107 (304)
T 2ynn_A 30 TTLYSGRVELWNY--ETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHP 107 (304)
T ss_dssp EEETTSEEEEEET--TTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS
T ss_pred EEcCCCcEEEEEC--CCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcC
Confidence 3444555666654 45677889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCC
Q psy8430 214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWD 292 (361)
Q Consensus 214 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d 292 (361)
++.+|++|+.|++|++||+.++. .....+.+|...|.+++|+| ++.+|++|+.|
T Consensus 108 ~~~~l~sgs~D~~v~lWd~~~~~-------------------------~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D 162 (304)
T 2ynn_A 108 TKPYVLSGSDDLTVKLWNWENNW-------------------------ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (304)
T ss_dssp SSSEEEEEETTSCEEEEEGGGTT-------------------------EEEEEECCCCSCEEEEEECTTCTTEEEEEETT
T ss_pred CCCEEEEECCCCeEEEEECCCCc-------------------------chhhhhcccCCcEEEEEECCCCCCEEEEEeCC
Confidence 99999999999999999987542 14566789999999999999 67899999999
Q ss_pred CcEEEeeCCCCeEEEEeec-CCCCCeE----------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 293 RVANLFDVETGTILQSLTG-HDEEPHI----------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 293 ~~v~iwd~~~~~~~~~~~~-h~~~v~~----------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
++|++||++++.....+.. |...+.. ++++++ .||.|+|| |+ +. ..++..+.||...|
T Consensus 163 ~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s-----~D~~i~iW--d~---~~-~~~~~~~~~h~~~v 231 (304)
T 2ynn_A 163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS-----DDLTIKIW--DY---QT-KSCVATLEGHMSNV 231 (304)
T ss_dssp SEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEE-----TTSEEEEE--ET---TT-TEEEEEEECCSSCE
T ss_pred CeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEc-----CCCeEEEE--eC---CC-CccceeeCCCCCCE
Confidence 9999999998877666653 4455544 567777 99999999 87 44 57789999998753
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=7.6e-29 Score=221.24 Aligned_cols=196 Identities=19% Similarity=0.187 Sum_probs=155.5
Q ss_pred eeeccceeEEeeecCcccee--eeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEE
Q psy8430 133 LKVQTSKIVSSFKTSLLSCY--KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210 (361)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~--~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~ 210 (361)
+.+..+..+..|........ ....+.+|.+.|++++|+|+|++|++|+.|++|++||+.+++++..+.+|...|.+++
T Consensus 97 ~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~ 176 (344)
T 4gqb_B 97 LVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVA 176 (344)
T ss_dssp EEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred EEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEE
Confidence 34455566677766554432 3344669999999999999999999999999999999999999999999999999999
Q ss_pred EecCCC-EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE--eCCCCcEEEEEEcC-CCCEE
Q psy8430 211 FLPNKD-LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL--LGHSNVVIAADWLS-DGEQV 286 (361)
Q Consensus 211 ~~~~~~-~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~-~~~~l 286 (361)
|+|++. +|++++.|++|++||++++. +...+ ..|...+.+++|+| ++.++
T Consensus 177 ~~~~~~~~l~s~s~D~~v~iwd~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~p~~~~~l 230 (344)
T 4gqb_B 177 ASPHKDSVFLSCSEDNRILLWDTRCPK--------------------------PASQIGCSAPGYLPTSLAWHPQQSEVF 230 (344)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTSSS--------------------------CEEECC----CCCEEEEEECSSCTTEE
T ss_pred ecCCCCCceeeeccccccccccccccc--------------------------eeeeeecceeeccceeeeecCCCCcce
Confidence 999874 78999999999999998763 22332 34566799999999 46788
Q ss_pred EEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCC---C-cccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 287 ITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYY---S-KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 287 ~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~---~-~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
++|+.||.|++||+++++++.++.+|...|.++.+++.. + +.+.||+|+|| |. +. .+ +..+.||++.|
T Consensus 231 ~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vw--d~---~~-~~-~~~~~~H~~~V 302 (344)
T 4gqb_B 231 VFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVL--DS---SL-SE-LFRSQAHRDFV 302 (344)
T ss_dssp EEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEE--CT---TC-CE-EEEECCCSSCE
T ss_pred EEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEE--EC---CC-Cc-EEEEcCCCCCE
Confidence 999999999999999999999999999999997776542 1 23589999999 77 33 22 34678998764
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.97 E-value=3.1e-29 Score=229.40 Aligned_cols=170 Identities=26% Similarity=0.422 Sum_probs=153.2
Q ss_pred eEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecc
Q psy8430 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 233 (361)
Q Consensus 154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~ 233 (361)
...+.+|.++|++++|+|++.+|++|+.|++|++||+.+++....+.+|...|.+++|+|++++|++|+.|++|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC
Q psy8430 234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313 (361)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~ 313 (361)
+. .++..+.+|...|.+++|+|++.++++|+.|++|++||++++.++.++.+|.
T Consensus 181 ~~--------------------------~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~ 234 (410)
T 1vyh_C 181 GF--------------------------ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR 234 (410)
T ss_dssp SS--------------------------CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred CC--------------------------ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCC
Confidence 54 2566678999999999999999999999999999999999999999999999
Q ss_pred CCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430 314 EEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST 360 (361)
Q Consensus 314 ~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~ 360 (361)
..+.+ ++++++ .||.|++| |+ +. ..++..+.+|...
T Consensus 235 ~~v~~~~~~~~g~~l~s~s-----~D~~v~vw--d~---~~-~~~~~~~~~h~~~ 278 (410)
T 1vyh_C 235 EWVRMVRPNQDGTLIASCS-----NDQTVRVW--VV---AT-KECKAELREHRHV 278 (410)
T ss_dssp SCEEEEEECTTSSEEEEEE-----TTSCEEEE--ET---TT-CCEEEEECCCSSC
T ss_pred ccEEEEEECCCCCEEEEEc-----CCCeEEEE--EC---CC-CceeeEecCCCce
Confidence 98887 456666 99999999 77 33 4566778888754
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.97 E-value=2.3e-28 Score=216.29 Aligned_cols=199 Identities=21% Similarity=0.284 Sum_probs=171.3
Q ss_pred eeeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEE
Q psy8430 131 NKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210 (361)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~ 210 (361)
....+..+..++.|............+.+|...|.+++|++++.++++|+.|++|++||+.+++.+..+..|...+.+++
T Consensus 50 ~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~ 129 (321)
T 3ow8_A 50 TVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLA 129 (321)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEE
T ss_pred EEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEE
Confidence 34556667778888877666777788999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy8430 211 FLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS 290 (361)
Q Consensus 211 ~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 290 (361)
|+|++++|++++.||.|++|++.++ .....+..|...+.+++|+|+|++|++|+
T Consensus 130 ~spdg~~l~~g~~dg~v~i~~~~~~--------------------------~~~~~~~~~~~~v~~~~~spdg~~lasg~ 183 (321)
T 3ow8_A 130 FSPDSQYLATGTHVGKVNIFGVESG--------------------------KKEYSLDTRGKFILSIAYSPDGKYLASGA 183 (321)
T ss_dssp ECTTSSEEEEECTTSEEEEEETTTC--------------------------SEEEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred ECCCCCEEEEEcCCCcEEEEEcCCC--------------------------ceeEEecCCCceEEEEEECCCCCEEEEEc
Confidence 9999999999999999999998765 24566778889999999999999999999
Q ss_pred CCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 291 WDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 291 ~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
.|+.|++||+++++++.++.+|...|.++.+++... ..+.||.|+|| |+ +. ..++..+.+|.+.|
T Consensus 184 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iw--d~---~~-~~~~~~~~~h~~~v 251 (321)
T 3ow8_A 184 IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY--DV---QH-ANLAGTLSGHASWV 251 (321)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEE--ET---TT-CCEEEEECCCSSCE
T ss_pred CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEE--EC---CC-cceeEEEcCCCCce
Confidence 999999999999999999999999998844443311 12399999999 77 33 45678889998753
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=4.7e-28 Score=217.23 Aligned_cols=179 Identities=23% Similarity=0.276 Sum_probs=155.4
Q ss_pred eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231 (361)
Q Consensus 152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd 231 (361)
+..+++.+|.+.|++++|+|++.+|++|+.|++|++||..+++....+..|...|.+++|+|++..+++++.|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430 232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG 311 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 311 (361)
+..... .........+.+|...|.+++|+|++..|++++.|++|++||+++++++.++.+
T Consensus 135 ~~~~~~--------------------~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~ 194 (354)
T 2pbi_B 135 LTFDKN--------------------ENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG 194 (354)
T ss_dssp CCCCTT--------------------CCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred Eecccc--------------------ccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcC
Confidence 864311 011134567778999999999999999999999999999999999999999999
Q ss_pred CCCCCeEE----------EEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 312 HDEEPHIL----------CVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 312 h~~~v~~~----------~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
|...|.++ +++++ .||.|++| |+ +. ..++..+.+|...|
T Consensus 195 h~~~v~~~~~~~~~~g~~l~sgs-----~Dg~v~~w--d~---~~-~~~~~~~~~h~~~v 243 (354)
T 2pbi_B 195 HGADVLCLDLAPSETGNTFVSGG-----CDKKAMVW--DM---RS-GQCVQAFETHESDV 243 (354)
T ss_dssp CSSCEEEEEECCCSSCCEEEEEE-----TTSCEEEE--ET---TT-CCEEEEECCCSSCE
T ss_pred CCCCeEEEEEEeCCCCCEEEEEe-----CCCeEEEE--EC---CC-CcEEEEecCCCCCe
Confidence 99888764 44555 99999999 87 44 45788899998753
No 8
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.97 E-value=5.1e-28 Score=215.77 Aligned_cols=181 Identities=22% Similarity=0.293 Sum_probs=154.3
Q ss_pred eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231 (361)
Q Consensus 152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd 231 (361)
+..+++.+|.+.|++++|+|++++|++|+.||+|++||+.+++.+..+..|...|.+++|+|+++++++++.|+.+++|+
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430 232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG 311 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 311 (361)
+.+... .......+.+|.+.|.++.|++++. +++++.|+.|++||+++++++.++.+
T Consensus 126 ~~~~~~----------------------~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~ 182 (340)
T 1got_B 126 LKTREG----------------------NVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTG 182 (340)
T ss_dssp TTTCSB----------------------SCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECC
T ss_pred CccCCC----------------------cceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcC
Confidence 865421 1124567789999999999998764 89999999999999999999999999
Q ss_pred CCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 312 HDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 312 h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
|...|.++.+++... ..+.||.|++| |+ +. ..++..|.+|...|
T Consensus 183 h~~~v~~~~~~~~~~~l~sg~~d~~v~~w--d~---~~-~~~~~~~~~h~~~v 229 (340)
T 1got_B 183 HTGDVMSLSLAPDTRLFVSGACDASAKLW--DV---RE-GMCRQTFTGHESDI 229 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEE--ET---TT-CSEEEEECCCSSCE
T ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEE--EC---CC-CeeEEEEcCCcCCE
Confidence 999998854443311 12399999999 87 44 45678889998653
No 9
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=3.9e-28 Score=214.78 Aligned_cols=181 Identities=19% Similarity=0.267 Sum_probs=160.4
Q ss_pred cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430 149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH 228 (361)
Q Consensus 149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~ 228 (361)
.+++.+..+.+|...+.+++|+|++++|++|+.|+.|++||+.+++....+..|...|.+++|+|++++|++++.||.|+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~ 189 (321)
T 3ow8_A 110 ENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 189 (321)
T ss_dssp TTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEE
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430 229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS 308 (361)
Q Consensus 229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 308 (361)
+||+.++ ..+..+.+|..+|.+++|+|++++|++|+.|+.|++||++++.++.+
T Consensus 190 iwd~~~~--------------------------~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~ 243 (321)
T 3ow8_A 190 IFDIATG--------------------------KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT 243 (321)
T ss_dssp EEETTTT--------------------------EEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEE
T ss_pred EEECCCC--------------------------cEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEE
Confidence 9999765 25677889999999999999999999999999999999999999999
Q ss_pred eecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 309 LTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 309 ~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
+.+|...|.++.++++.. +.+.||.|+|| |+ +. ..++..|.+|.+.|
T Consensus 244 ~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iw--d~---~~-~~~~~~~~~h~~~v 293 (321)
T 3ow8_A 244 LSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW--DV---GT-RTCVHTFFDHQDQV 293 (321)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEE--ET---TT-TEEEEEECCCSSCE
T ss_pred EcCCCCceEEEEECCCCCEEEEEeCCCcEEEE--eC---CC-CEEEEEEcCCCCcE
Confidence 999999998854444311 12399999999 77 44 56788899998754
No 10
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1e-27 Score=212.87 Aligned_cols=204 Identities=19% Similarity=0.219 Sum_probs=153.9
Q ss_pred eeeccceeEEeeecCccceeeeEEe-ec-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-------CeEEEEEeCCC
Q psy8430 133 LKVQTSKIVSSFKTSLLSCYKIRSF-SG-HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-------GKCVLQYSGHS 203 (361)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~-h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~-------~~~~~~~~~h~ 203 (361)
..+..+..+..|.........+..+ .+ |.+.|++++|+|++.+|++|+.|++|++||+.. .+.+..+.+|.
T Consensus 28 as~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~ 107 (330)
T 2hes_X 28 ATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHE 107 (330)
T ss_dssp EEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC---
T ss_pred EEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCC
Confidence 3445556666676655445566666 45 999999999999999999999999999999843 35677889999
Q ss_pred CCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCC
Q psy8430 204 GSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG 283 (361)
Q Consensus 204 ~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 283 (361)
..|.+++|+|++++|++|+.|++|++||++... ....++..+.+|...|.+++|+|++
T Consensus 108 ~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~----------------------~~~~~~~~~~~h~~~v~~v~~~p~~ 165 (330)
T 2hes_X 108 NEVKGVAWSNDGYYLATCSRDKSVWIWETDESG----------------------EEYECISVLQEHSQDVKHVIWHPSE 165 (330)
T ss_dssp -CEEEEEECTTSCEEEEEETTSCEEEEECCTTC----------------------CCCEEEEEECCCSSCEEEEEECSSS
T ss_pred CcEEEEEECCCCCEEEEEeCCCEEEEEeccCCC----------------------CCeEEEEEeccCCCceEEEEECCCC
Confidence 999999999999999999999999999985321 1113566788999999999999999
Q ss_pred CEEEEEeCCCcEEEeeCCCC--eEEEEeecCCCCCeEEEEEcC--CC---cccCCCeEEEEcCCCCCCCC----cceeee
Q psy8430 284 EQVITASWDRVANLFDVETG--TILQSLTGHDEEPHILCVSSY--YS---KVSCDLFQRIQHLDCGTSEN----PIHSVC 352 (361)
Q Consensus 284 ~~l~s~~~d~~v~iwd~~~~--~~~~~~~~h~~~v~~~~~s~s--~~---~v~~dg~i~iW~~d~~~~~~----~~~~v~ 352 (361)
.+|++|+.|++|++||..++ +++..+.+|...|.++.+++. .. ..+.|++|+|| |+.++.. ...++.
T Consensus 166 ~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw--~~~~~~~~~~~~~~~~~ 243 (330)
T 2hes_X 166 ALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVW--KYMGDDEDDQQEWVCEA 243 (330)
T ss_dssp SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEE--EEEEECTTSCEEEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEE--EecCCCccccceeEEee
Confidence 99999999999999999876 688899999999987554443 11 12399999999 6632211 114455
Q ss_pred eecc-cccC
Q psy8430 353 VFQD-IQST 360 (361)
Q Consensus 353 ~~~~-h~~~ 360 (361)
.+.+ |...
T Consensus 244 ~~~~~h~~~ 252 (330)
T 2hes_X 244 ILPDVHKRQ 252 (330)
T ss_dssp ECCSCCSSC
T ss_pred ecccccccc
Confidence 5655 6553
No 11
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.96 E-value=2.6e-27 Score=209.33 Aligned_cols=192 Identities=23% Similarity=0.322 Sum_probs=160.2
Q ss_pred eeeccceeEEeeecCc---cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEE
Q psy8430 133 LKVQTSKIVSSFKTSL---LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 209 (361)
Q Consensus 133 ~~~~~~~~~~~~~~~~---~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v 209 (361)
+.+..+..+..|.... ..+.+++.+.+|...|.+++|+|++.+|++|+.|++|++||+.+++.+..+.+|...|.++
T Consensus 34 ~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~ 113 (319)
T 3frx_A 34 LSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSV 113 (319)
T ss_dssp EEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE
T ss_pred EEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEE
Confidence 3445555566665432 2356788999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC------C
Q psy8430 210 RFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD------G 283 (361)
Q Consensus 210 ~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~ 283 (361)
+|+|++.+|++++.|++|++||++.. +...+.+|...|.++.|+|. +
T Consensus 114 ~~~~~~~~l~s~s~D~~i~vwd~~~~---------------------------~~~~~~~h~~~v~~~~~~~~~~~~~~~ 166 (319)
T 3frx_A 114 DIDKKASMIISGSRDKTIKVWTIKGQ---------------------------CLATLLGHNDWVSQVRVVPNEKADDDS 166 (319)
T ss_dssp EECTTSCEEEEEETTSCEEEEETTSC---------------------------EEEEECCCSSCEEEEEECCC------C
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCC---------------------------eEEEEeccCCcEEEEEEccCCCCCCCc
Confidence 99999999999999999999998643 56778899999999999985 4
Q ss_pred CEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeeccc
Q psy8430 284 EQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDI 357 (361)
Q Consensus 284 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h 357 (361)
.++++++.|+.|++||++++++...+.+|...|.++.+++.+. ..+.||.|+|| |+ +. ..++..+.+|
T Consensus 167 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iw--d~---~~-~~~~~~~~~~ 237 (319)
T 3frx_A 167 VTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLW--NL---AA-KKAMYTLSAQ 237 (319)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEE--ET---TT-TEEEEEEECC
T ss_pred cEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEE--EC---CC-CcEEEEecCC
Confidence 5899999999999999999999999999999999855444322 12399999999 77 33 4455555554
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.96 E-value=1.1e-27 Score=211.63 Aligned_cols=174 Identities=24% Similarity=0.348 Sum_probs=151.7
Q ss_pred ceeeeEEeeccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCC-----CeEEEEEeCCCCCeEEEEEecCCCEEEEEEC
Q psy8430 150 SCYKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQT-----GKCVLQYSGHSGSVNSVRFLPNKDLVLSASG 223 (361)
Q Consensus 150 ~~~~~~~l~~h~~~V~~l~~~~~~-~~l~s~s~d~~i~~wd~~~-----~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~ 223 (361)
...+..+|.+|.+.|++++|+|++ ++|++|+.|++|++|++.. +.++..+.+|...|.+++|+|++.+|++|+.
T Consensus 6 ~~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~ 85 (319)
T 3frx_A 6 VLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW 85 (319)
T ss_dssp EEEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeC
Confidence 346678899999999999999965 7999999999999999853 3567789999999999999999999999999
Q ss_pred CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC
Q psy8430 224 DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG 303 (361)
Q Consensus 224 d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 303 (361)
|++|++||+.++ .+...+.+|...|.+++|+|++.++++|+.|++|++||++ +
T Consensus 86 D~~v~~wd~~~~--------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~ 138 (319)
T 3frx_A 86 DKTLRLWDVATG--------------------------ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-G 138 (319)
T ss_dssp TSEEEEEETTTT--------------------------EEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-S
T ss_pred CCEEEEEECCCC--------------------------CeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-C
Confidence 999999999766 3567788999999999999999999999999999999997 6
Q ss_pred eEEEEeecCCCCCeEE--------------EEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 304 TILQSLTGHDEEPHIL--------------CVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 304 ~~~~~~~~h~~~v~~~--------------~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
.++.++.+|...+.++ +++++ .|+.|++| |+ +. ..+...+.+|...|
T Consensus 139 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~-----~d~~i~~w--d~---~~-~~~~~~~~~h~~~v 199 (319)
T 3frx_A 139 QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAG-----NDKMVKAW--NL---NQ-FQIEADFIGHNSNI 199 (319)
T ss_dssp CEEEEECCCSSCEEEEEECCC------CCEEEEEE-----TTSCEEEE--ET---TT-TEEEEEECCCCSCE
T ss_pred CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEe-----CCCEEEEE--EC---Cc-chhheeecCCCCcE
Confidence 7888898998888764 55566 99999999 77 44 56677888998753
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.96 E-value=1.2e-26 Score=208.09 Aligned_cols=173 Identities=18% Similarity=0.267 Sum_probs=149.2
Q ss_pred eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec--CCCEEEEEECCCcEEE
Q psy8430 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVHI 229 (361)
Q Consensus 152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~i~l 229 (361)
.....+.+|.+.|.+++|+|++..|++|+.|++|++||+.+++.+..+.+|...|.+++|+| +++.|++|+.||+|++
T Consensus 145 ~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~ 224 (354)
T 2pbi_B 145 AKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMV 224 (354)
T ss_dssp GGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEE
T ss_pred ccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEE
Confidence 34566778999999999999999999999999999999999999999999999999999988 4689999999999999
Q ss_pred EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEe
Q psy8430 230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 309 (361)
Q Consensus 230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 309 (361)
||++++ .++..+.+|...|.+++|+|++.+|++|+.|++|++||+++++.+..+
T Consensus 225 wd~~~~--------------------------~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~ 278 (354)
T 2pbi_B 225 WDMRSG--------------------------QCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIY 278 (354)
T ss_dssp EETTTC--------------------------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EECCCC--------------------------cEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 999765 256778899999999999999999999999999999999999888777
Q ss_pred ecCC--CCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 310 TGHD--EEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 310 ~~h~--~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
..+. ..+.+ ++++++ .|+.|+|| |+ +. ..++..+.+|.+.|
T Consensus 279 ~~~~~~~~~~~~~~s~~g~~l~~g~-----~d~~i~vw--d~---~~-~~~~~~l~~h~~~v 329 (354)
T 2pbi_B 279 SKESIIFGASSVDFSLSGRLLFAGY-----NDYTINVW--DV---LK-GSRVSILFGHENRV 329 (354)
T ss_dssp CCTTCCSCEEEEEECTTSSEEEEEE-----TTSCEEEE--ET---TT-CSEEEEECCCSSCE
T ss_pred cCCCcccceeEEEEeCCCCEEEEEE-----CCCcEEEE--EC---CC-CceEEEEECCCCcE
Confidence 6443 23444 455556 89999999 87 33 45677888998754
No 14
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=1.8e-27 Score=208.17 Aligned_cols=177 Identities=16% Similarity=0.202 Sum_probs=146.6
Q ss_pred eEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC--CeEEEEEeCCCCCeEEEEEec--CCCEEEEEECCCcEEE
Q psy8430 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT--GKCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVHI 229 (361)
Q Consensus 154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~--~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~i~l 229 (361)
+..+.+|.+.|++++|+|+|++|++|+.|++|++||+.. ++.+.++.+|.+.|.+++|+| ++++|++|+.|++|++
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 345779999999999999999999999999999999974 367889999999999999986 3899999999999999
Q ss_pred EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEEEeeCCCCeE--
Q psy8430 230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETGTI-- 305 (361)
Q Consensus 230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~~-- 305 (361)
||+.++.. .....+.+|...|.+++|+|+ |.+|++++.|+.|++||++++..
T Consensus 82 Wd~~~~~~------------------------~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~ 137 (297)
T 2pm7_B 82 WKEENGRW------------------------SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS 137 (297)
T ss_dssp EEBSSSCB------------------------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC
T ss_pred EEcCCCce------------------------EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee
Confidence 99875421 245567789999999999997 89999999999999999987632
Q ss_pred EEEeecCCCCCeEE---------------------EEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 306 LQSLTGHDEEPHIL---------------------CVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 306 ~~~~~~h~~~v~~~---------------------~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
...+.+|...|.++ +++++ .|+.|+|| |+.++.....++..|.||++.|
T Consensus 138 ~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs-----~D~~v~lw--d~~~~~~~~~~~~~l~~H~~~V 207 (297)
T 2pm7_B 138 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG-----ADNLVKIW--KYNSDAQTYVLESTLEGHSDWV 207 (297)
T ss_dssp CEEEECCSSCEEEEEECCCC------------CCEEEEEE-----TTSCEEEE--EEETTTTEEEEEEEECCCSSCE
T ss_pred eeeeecccCccceEeecCCcccccccCCCCCCcceEEEEc-----CCCcEEEE--EEcCCCceEEEEEEecCCCCce
Confidence 35667888777654 55555 99999999 7754444344678899998754
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=2.3e-27 Score=211.98 Aligned_cols=182 Identities=23% Similarity=0.342 Sum_probs=150.4
Q ss_pred eeeeEEeeccCC-CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE--E-EeCCCCCeEEEEEecCCCEEEEEECCCc
Q psy8430 151 CYKIRSFSGHRD-GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL--Q-YSGHSGSVNSVRFLPNKDLVLSASGDKS 226 (361)
Q Consensus 151 ~~~~~~l~~h~~-~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~--~-~~~h~~~v~~v~~~~~~~~l~s~~~d~~ 226 (361)
.+++.++.+|.+ .|++++|+|+|.+|++|+.|++|++||+.++.... . ..+|...|.+++|+|++++|++|+.|++
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 467788999988 99999999999999999999999999998875432 2 3589999999999999999999999999
Q ss_pred EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC---
Q psy8430 227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG--- 303 (361)
Q Consensus 227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~--- 303 (361)
+++||+..+. ..+...+.+|...|.+++|+|++++|++|+.|++|++||++++
T Consensus 85 v~iw~~~~~~------------------------~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 140 (345)
T 3fm0_A 85 TCIWKKNQDD------------------------FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEY 140 (345)
T ss_dssp EEEEEECCC-------------------------EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCE
T ss_pred EEEEEccCCC------------------------eEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCe
Confidence 9999986431 1256778899999999999999999999999999999999875
Q ss_pred eEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCc-ceeeeeecccccCC
Q psy8430 304 TILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENP-IHSVCVFQDIQSTG 361 (361)
Q Consensus 304 ~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~-~~~v~~~~~h~~~~ 361 (361)
.++..+.+|...|.++.++++.. ..+.|+.|++| |. +.. ..++..+.+|.+.|
T Consensus 141 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w--~~---~~~~~~~~~~~~~h~~~v 197 (345)
T 3fm0_A 141 ECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLY--RE---EEDDWVCCATLEGHESTV 197 (345)
T ss_dssp EEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEE--EE---ETTEEEEEEEECCCSSCE
T ss_pred EEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEE--Ee---cCCCEEEEEEecCCCCce
Confidence 45677888999998855544421 12389999999 76 331 24667889998754
No 16
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=8.5e-27 Score=205.11 Aligned_cols=165 Identities=28% Similarity=0.461 Sum_probs=146.9
Q ss_pred eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230 (361)
Q Consensus 151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw 230 (361)
..+..++.+|.+.|++++|+|++++|++|+.|+.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW 92 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence 35567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430 231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 310 (361)
Q Consensus 231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 310 (361)
|+.++ .++..+.+|...|.+++|+|+++++++|+.|+.|++||+++++++..+.
T Consensus 93 d~~~~--------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 146 (312)
T 4ery_A 93 DVSSG--------------------------KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP 146 (312)
T ss_dssp ETTTC--------------------------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred ECCCC--------------------------cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec
Confidence 98765 2567788999999999999999999999999999999999999999999
Q ss_pred cCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCC
Q psy8430 311 GHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGT 343 (361)
Q Consensus 311 ~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~ 343 (361)
.|...+.++.++.... ..+.||.|++| |+++
T Consensus 147 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~w--d~~~ 180 (312)
T 4ery_A 147 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTAS 180 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEE--ETTT
T ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEE--ECCC
Confidence 9999988844443311 12399999999 7733
No 17
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.96 E-value=1.3e-26 Score=206.65 Aligned_cols=172 Identities=22% Similarity=0.313 Sum_probs=149.8
Q ss_pred eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231 (361)
Q Consensus 152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd 231 (361)
.....+.+|.+.|.++.|++++ .+++++.|++|++||+.+++.+..+.+|.+.|.+++|+|++.++++|+.|+.|++||
T Consensus 134 ~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd 212 (340)
T 1got_B 134 RVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212 (340)
T ss_dssp EEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 5677889999999999999887 589999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430 232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG 311 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 311 (361)
++++ .+...+.+|...|.+++|+|++.+|++|+.|++|++||+++++.+..+..
T Consensus 213 ~~~~--------------------------~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 266 (340)
T 1got_B 213 VREG--------------------------MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH 266 (340)
T ss_dssp TTTC--------------------------SEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred CCCC--------------------------eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEcc
Confidence 8765 25677889999999999999999999999999999999999988877753
Q ss_pred C--CCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 312 H--DEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 312 h--~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
+ ...+.+ ++++++ .||.|++| |. +. ..++..+.||.+.|
T Consensus 267 ~~~~~~v~~~~~s~~g~~l~~g~-----~d~~i~vw--d~---~~-~~~~~~~~~h~~~v 315 (340)
T 1got_B 267 DNIICGITSVSFSKSGRLLLAGY-----DDFNCNVW--DA---LK-ADRAGVLAGHDNRV 315 (340)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEE-----TTSEEEEE--ET---TT-CCEEEEEECCSSCE
T ss_pred CCcccceEEEEECCCCCEEEEEC-----CCCeEEEE--Ec---cc-CcEeeEeecCCCcE
Confidence 2 235665 455555 99999999 77 33 45678899998754
No 18
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=3.3e-26 Score=201.32 Aligned_cols=185 Identities=26% Similarity=0.450 Sum_probs=157.3
Q ss_pred ccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCC
Q psy8430 136 QTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215 (361)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~ 215 (361)
..+..+..|.. .+++....+.+|...|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++
T Consensus 42 ~~dg~i~iw~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 119 (312)
T 4ery_A 42 SADKLIKIWGA--YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS 119 (312)
T ss_dssp ETTSCEEEEET--TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred eCCCeEEEEeC--CCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC
Confidence 33444444443 3456778899999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy8430 216 DLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVA 295 (361)
Q Consensus 216 ~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v 295 (361)
++|++++.|+.|++||++++ .....+..|...|.+++|+|++.++++++.|+.|
T Consensus 120 ~~l~s~~~d~~i~iwd~~~~--------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
T 4ery_A 120 NLIVSGSFDESVRIWDVKTG--------------------------KCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 173 (312)
T ss_dssp SEEEEEETTSCEEEEETTTC--------------------------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CEEEEEeCCCcEEEEECCCC--------------------------EEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 99999999999999998765 2566778899999999999999999999999999
Q ss_pred EEeeCCCCeEEEEeec-CCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeeccccc
Q psy8430 296 NLFDVETGTILQSLTG-HDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS 359 (361)
Q Consensus 296 ~iwd~~~~~~~~~~~~-h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~ 359 (361)
++||+++++++..+.. +...+.. ++++++ .||.|++| |+ +. ..++..+.+|..
T Consensus 174 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~d~~i~iw--d~---~~-~~~~~~~~~~~~ 235 (312)
T 4ery_A 174 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT-----LDNTLKLW--DY---SK-GKCLKTYTGHKN 235 (312)
T ss_dssp EEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE-----TTTEEEEE--ET---TT-TEEEEEECSSCC
T ss_pred EEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEc-----CCCeEEEE--EC---CC-CcEEEEEEecCC
Confidence 9999999998887754 4555665 445555 89999999 77 44 456777888765
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.3e-27 Score=208.30 Aligned_cols=185 Identities=21% Similarity=0.286 Sum_probs=143.3
Q ss_pred eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--eEEEEE-eC-CCCCeEEEEEecCCCEEEEEECCCc
Q psy8430 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQY-SG-HSGSVNSVRFLPNKDLVLSASGDKS 226 (361)
Q Consensus 151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~--~~~~~~-~~-h~~~v~~v~~~~~~~~l~s~~~d~~ 226 (361)
.++++++.+|.++|++++|+|+ +|++|+.|++|++||+..+ ..+..+ .+ |...|.+++|+|++++|++++.|++
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~ 81 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDST 81 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred cccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCc
Confidence 4567889999999999999988 9999999999999999875 455556 34 9999999999999999999999999
Q ss_pred EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC----
Q psy8430 227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET---- 302 (361)
Q Consensus 227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~---- 302 (361)
|++||+...... .....+...+.+|...|.+++|+|+|++|++|+.|++|++||++.
T Consensus 82 v~iw~~~~~~~~-------------------~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~ 142 (330)
T 2hes_X 82 VSIWAKEESADR-------------------TFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEE 142 (330)
T ss_dssp EEEEEC--------------------------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCC
T ss_pred EEEEEcccCcCc-------------------cccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCC
Confidence 999998532100 001135667889999999999999999999999999999999943
Q ss_pred CeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCC-cceeeeeecccccCC
Q psy8430 303 GTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSEN-PIHSVCVFQDIQSTG 361 (361)
Q Consensus 303 ~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~-~~~~v~~~~~h~~~~ 361 (361)
.+++..+.+|...|.++.++++.. ..+.|+.|+|| |. +. ...++..+.||.+.|
T Consensus 143 ~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW--~~---~~~~~~~~~~~~~h~~~v 200 (330)
T 2hes_X 143 YECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIW--KD---YDDDWECVAVLNGHEGTV 200 (330)
T ss_dssp CEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE--EE---ETTEEEEEEEECCCSSCE
T ss_pred eEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEE--EC---CCCCeeEEEEccCCCCcE
Confidence 367788999999998844433311 12399999999 76 32 136788999998754
No 20
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.96 E-value=5.5e-28 Score=218.89 Aligned_cols=182 Identities=22% Similarity=0.289 Sum_probs=154.2
Q ss_pred eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230 (361)
Q Consensus 151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw 230 (361)
..+.++|.+|.+.|++++|+|++++|++|+.|++|++||+.+++....+.+|...|.+++|+|++++|++|+.|+.+++|
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIF 135 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence 35567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEeeCCCCeEEEEe
Q psy8430 231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GEQVITASWDRVANLFDVETGTILQSL 309 (361)
Q Consensus 231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~ 309 (361)
|+.+.... .........+.+|.+.+.++.|+|+ +..|++|+.|++|++||+++++++..+
T Consensus 136 ~~~~~~~~-------------------~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~ 196 (380)
T 3iz6_a 136 NLSSQADR-------------------DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIF 196 (380)
T ss_dssp ECCCCSSC-------------------CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEE
T ss_pred ECCCCccc-------------------cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEe
Confidence 98653210 0011234557789999999999996 457999999999999999999998877
Q ss_pred -----ecCCCCCeE---------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 310 -----TGHDEEPHI---------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 310 -----~~h~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
.+|...+.+ ++++++ .||.|++| |+ +....++..+.||.+.|
T Consensus 197 ~~~~~~~h~~~v~~~~~~~~~~~~l~sgs-----~D~~v~~w--d~---~~~~~~~~~~~~h~~~v 252 (380)
T 3iz6_a 197 GSEFPSGHTADVLSLSINSLNANMFISGS-----CDTTVRLW--DL---RITSRAVRTYHGHEGDI 252 (380)
T ss_dssp CCCSSSSCCSCEEEEEECSSSCCEEEEEE-----TTSCEEEE--ET---TTTCCCCEEECCCSSCC
T ss_pred ecccCCCCccCeEEEEeecCCCCEEEEEE-----CCCeEEEE--EC---CCCCcceEEECCcCCCe
Confidence 567777766 556666 99999999 88 54446678899998765
No 21
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.95 E-value=1.4e-26 Score=206.82 Aligned_cols=183 Identities=27% Similarity=0.330 Sum_probs=148.4
Q ss_pred eeccceeEEeeecCccceeeeEE-eeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--eEEEEEeCCCCCeEEEE
Q psy8430 134 KVQTSKIVSSFKTSLLSCYKIRS-FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNSVR 210 (361)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~-l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~--~~~~~~~~h~~~v~~v~ 210 (361)
.+..+..+..|............ ..+|.+.|.+++|+|+|++|++|+.|++|++||+..+ +++..+.+|...|.+++
T Consensus 33 s~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~ 112 (345)
T 3fm0_A 33 SCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVA 112 (345)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEE
T ss_pred EEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEE
Confidence 34445556666554443333333 3689999999999999999999999999999999876 46788899999999999
Q ss_pred EecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy8430 211 FLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS 290 (361)
Q Consensus 211 ~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 290 (361)
|+|++++|++|+.|++|++||+..+.. ..++..+.+|...|.+++|+|++.+|++++
T Consensus 113 ~sp~~~~l~s~s~D~~v~iwd~~~~~~-----------------------~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s 169 (345)
T 3fm0_A 113 WAPSGNLLATCSRDKSVWVWEVDEEDE-----------------------YECVSVLNSHTQDVKHVVWHPSQELLASAS 169 (345)
T ss_dssp ECTTSSEEEEEETTSCEEEEEECTTSC-----------------------EEEEEEECCCCSCEEEEEECSSSSCEEEEE
T ss_pred EeCCCCEEEEEECCCeEEEEECCCCCC-----------------------eEEEEEecCcCCCeEEEEECCCCCEEEEEe
Confidence 999999999999999999999875421 124567788999999999999999999999
Q ss_pred CCCcEEEeeCCCCe--EEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCC
Q psy8430 291 WDRVANLFDVETGT--ILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDC 341 (361)
Q Consensus 291 ~d~~v~iwd~~~~~--~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~ 341 (361)
.|+.|++||.+++. +..++.+|...|.++.+++++. ..+.||.|+|| |.
T Consensus 170 ~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW--~~ 223 (345)
T 3fm0_A 170 YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW--RQ 223 (345)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE--EE
T ss_pred CCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEe--cc
Confidence 99999999998875 5578899999999855544422 22499999999 64
No 22
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=2e-26 Score=201.53 Aligned_cols=185 Identities=24% Similarity=0.299 Sum_probs=152.7
Q ss_pred eeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCCCeE
Q psy8430 132 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVN 207 (361)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~--~~~~l~s~s~d~~i~~wd~~~~~--~~~~~~~h~~~v~ 207 (361)
...+..+..+..|.......+++.++.+|.++|++++|+| ++.+|++|+.|++|++||+.+++ .+..+.+|...|.
T Consensus 24 las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~ 103 (297)
T 2pm7_B 24 MATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVN 103 (297)
T ss_dssp EEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEE
T ss_pred EEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCcee
Confidence 3445666777778776666678899999999999999986 38899999999999999998873 5667888999999
Q ss_pred EEEEecC--CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC---
Q psy8430 208 SVRFLPN--KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--- 282 (361)
Q Consensus 208 ~v~~~~~--~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--- 282 (361)
+++|+|+ +.+|++++.|++|++||++.+.. .....+.+|...|.+++|+|+
T Consensus 104 ~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~------------------------~~~~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 104 SVQWAPHEYGPMLLVASSDGKVSVVEFKENGT------------------------TSPIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp EEEECCGGGCSEEEEEETTSEEEEEEBCSSSC------------------------BCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEeCcCCCCcEEEEEECCCcEEEEEecCCCc------------------------eeeeeeecccCccceEeecCCccc
Confidence 9999997 88999999999999999875411 123567789999999999997
Q ss_pred ----------CCEEEEEeCCCcEEEeeCCCCe----EEEEeecCCCCCeEEEEEcCC------CcccCCCeEEEEcCCCC
Q psy8430 283 ----------GEQVITASWDRVANLFDVETGT----ILQSLTGHDEEPHILCVSSYY------SKVSCDLFQRIQHLDCG 342 (361)
Q Consensus 283 ----------~~~l~s~~~d~~v~iwd~~~~~----~~~~~~~h~~~v~~~~~s~s~------~~v~~dg~i~iW~~d~~ 342 (361)
+++|++|+.|++|++||++++. +..++.+|...|.++.+++.. ++.+.|++|+|| |+.
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iW--d~~ 237 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIW--TQD 237 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE--EES
T ss_pred ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEE--EeC
Confidence 5799999999999999998765 677889999998876665531 123499999999 663
No 23
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=8e-27 Score=209.40 Aligned_cols=193 Identities=17% Similarity=0.163 Sum_probs=149.3
Q ss_pred ceeEEeeecCccceeee--EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCC
Q psy8430 138 SKIVSSFKTSLLSCYKI--RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215 (361)
Q Consensus 138 ~~~~~~~~~~~~~~~~~--~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~ 215 (361)
+..+..|.........+ ....+|.+.|++++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++
T Consensus 114 dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 114 SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK 193 (357)
T ss_dssp TSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTC
T ss_pred CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC
Confidence 33455555443333222 3345899999999999999999999999999999999999999999999999999999987
Q ss_pred C-EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC-CCEEEEEeCCC
Q psy8430 216 D-LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GEQVITASWDR 293 (361)
Q Consensus 216 ~-~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~ 293 (361)
. ++++++.||+|++||++++... .......|...+.+++|+|+ +.++++|+.|+
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~~~~~------------------------~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~ 249 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRKPKPA------------------------TRIDFCASDTIPTSVTWHPEKDDTFACGDETG 249 (357)
T ss_dssp SSCEEEEETTSCEEECCTTSSSCB------------------------CBCCCTTCCSCEEEEEECTTSTTEEEEEESSS
T ss_pred CceeeeeccCCceEEEECCCCcee------------------------eeeeeccccccccchhhhhcccceEEEeeccc
Confidence 5 7899999999999999876332 11223456778999999997 56889999999
Q ss_pred cEEEeeCCCCeEEEEeecCCCCCeEEEEEcCC---C-cccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 294 VANLFDVETGTILQSLTGHDEEPHILCVSSYY---S-KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 294 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~---~-~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
.|++||+++++++.++.+|...|.++.+++.+ + ..+.||+|+|| |+.+ .+++. +.+|++.|
T Consensus 250 ~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iw--d~~~----~~~~~-~~~H~~~V 314 (357)
T 4g56_B 250 NVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVL--DADF----SEVFR-DLSHRDFV 314 (357)
T ss_dssp CEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEE--CTTS----CEEEE-ECCCSSCE
T ss_pred ceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEE--ECCC----CcEeE-ECCCCCCE
Confidence 99999999999999999999999987666542 1 23589999999 7733 33343 34787654
No 24
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.95 E-value=4.9e-26 Score=206.98 Aligned_cols=194 Identities=22% Similarity=0.358 Sum_probs=154.0
Q ss_pred eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec-
Q psy8430 135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP- 213 (361)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~- 213 (361)
+..+..+..|.. .+++.+..+.+|.+.|++++|+|++.+|++|+.|++|++||+.++++...+. +...|.+++|+|
T Consensus 141 ~~~d~~i~iwd~--~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~ 217 (393)
T 1erj_A 141 GAEDRLIRIWDI--ENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPG 217 (393)
T ss_dssp EETTSCEEEEET--TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECST
T ss_pred EcCCCeEEEEEC--CCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECC
Confidence 334444555554 4557788899999999999999999999999999999999999999888877 678899999999
Q ss_pred CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC
Q psy8430 214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR 293 (361)
Q Consensus 214 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 293 (361)
++.+|++++.|+.|++||+.++..+.. .........+|...|.+++|+|+|++|++|+.|+
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~-------------------~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~ 278 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVER-------------------LDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR 278 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEE-------------------EC------CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEe-------------------ecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 899999999999999999976632110 0011122357999999999999999999999999
Q ss_pred cEEEeeCCC------------CeEEEEeecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeee
Q psy8430 294 VANLFDVET------------GTILQSLTGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCV 353 (361)
Q Consensus 294 ~v~iwd~~~------------~~~~~~~~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~ 353 (361)
.|++||+++ +.+..++.+|...|.+ ++++++ .||.|++| |. +. ..++..
T Consensus 279 ~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs-----~D~~v~iw--d~---~~-~~~~~~ 347 (393)
T 1erj_A 279 SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS-----KDRGVLFW--DK---KS-GNPLLM 347 (393)
T ss_dssp EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEE-----TTSEEEEE--ET---TT-CCEEEE
T ss_pred EEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEe-----CCCeEEEE--EC---CC-CeEEEE
Confidence 999999975 3466788899998887 455566 99999999 87 33 456788
Q ss_pred ecccccCC
Q psy8430 354 FQDIQSTG 361 (361)
Q Consensus 354 ~~~h~~~~ 361 (361)
+.||.+.|
T Consensus 348 l~~h~~~v 355 (393)
T 1erj_A 348 LQGHRNSV 355 (393)
T ss_dssp EECCSSCE
T ss_pred ECCCCCCE
Confidence 99998753
No 25
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.95 E-value=8.4e-27 Score=208.03 Aligned_cols=166 Identities=16% Similarity=0.136 Sum_probs=138.4
Q ss_pred eccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE----EeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecc
Q psy8430 158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ----YSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 233 (361)
Q Consensus 158 ~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~----~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~ 233 (361)
..|...|.+++|+|++ .|++|+.||+|++||+.+++.+.. ..+|.+.|.+++|+|++++|++|+.|++|++||+.
T Consensus 79 ~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~ 157 (344)
T 4gqb_B 79 VQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA 157 (344)
T ss_dssp EEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 3567889999999986 788999999999999998865433 45899999999999999999999999999999997
Q ss_pred ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEeeCCCCeEEEEeec-
Q psy8430 234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLFDVETGTILQSLTG- 311 (361)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~- 311 (361)
++ .++..+.+|...|++++|+|++. ++++++.|++|++||++++++...+..
T Consensus 158 ~~--------------------------~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 211 (344)
T 4gqb_B 158 QQ--------------------------VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS 211 (344)
T ss_dssp TT--------------------------EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC--
T ss_pred CC--------------------------cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecc
Confidence 66 36778899999999999999885 789999999999999999999888753
Q ss_pred -CCCCCeE---------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 312 -HDEEPHI---------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 312 -h~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
|...+.+ ++++++ .||.|+|| |+ +. ..++..|.+|...|
T Consensus 212 ~~~~~~~~~~~~p~~~~~l~sg~-----~dg~v~~w--d~---~~-~~~~~~~~~h~~~v 260 (344)
T 4gqb_B 212 APGYLPTSLAWHPQQSEVFVFGD-----ENGTVSLV--DT---KS-TSCVLSSAVHSQCV 260 (344)
T ss_dssp --CCCEEEEEECSSCTTEEEEEE-----TTSEEEEE--ES---CC---CCEEEECCSSCE
T ss_pred eeeccceeeeecCCCCcceEEec-----cCCcEEEE--EC---CC-CcEEEEEcCCCCCE
Confidence 4445555 445555 99999999 88 44 56688899998754
No 26
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.95 E-value=3.1e-26 Score=207.35 Aligned_cols=172 Identities=25% Similarity=0.353 Sum_probs=138.9
Q ss_pred eEEeeccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEEE-----eCCCCCeEEEEEec-CCCEEEEEECCCc
Q psy8430 154 IRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQY-----SGHSGSVNSVRFLP-NKDLVLSASGDKS 226 (361)
Q Consensus 154 ~~~l~~h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~~~~~~-----~~h~~~v~~v~~~~-~~~~l~s~~~d~~ 226 (361)
.+.+.+|.+.|.++.|.|+ +..|++|+.|++|++||+.+++.+..+ .+|...|.+++|+| ++++|++|+.|++
T Consensus 150 ~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~ 229 (380)
T 3iz6_a 150 SRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTT 229 (380)
T ss_dssp CCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSC
T ss_pred eeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCe
Confidence 3456678888888888875 346888999999999999998888777 57999999999987 7899999999999
Q ss_pred EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430 227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL 306 (361)
Q Consensus 227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 306 (361)
|++||++... .++..+.+|...|.+++|+|++.+|++|+.|++|++||+++++++
T Consensus 230 v~~wd~~~~~-------------------------~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 230 VRLWDLRITS-------------------------RAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQL 284 (380)
T ss_dssp EEEEETTTTC-------------------------CCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEE
T ss_pred EEEEECCCCC-------------------------cceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEE
Confidence 9999986431 256788899999999999999999999999999999999999999
Q ss_pred EEeecCCC-------CCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeee----cccccCC
Q psy8430 307 QSLTGHDE-------EPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVF----QDIQSTG 361 (361)
Q Consensus 307 ~~~~~h~~-------~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~----~~h~~~~ 361 (361)
..+..+.. .+.+ ++++++ .||.|++| |..++ .++..+ .+|.+.|
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~-----~dg~i~vw--d~~~~----~~~~~~~~~~~~h~~~v 347 (380)
T 3iz6_a 285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGY-----SNGDCYVW--DTLLA----EMVLNLGTLQNSHEGRI 347 (380)
T ss_dssp EEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC-----TTSCEEEE--ETTTC----CEEEEECCSCSSCCCCC
T ss_pred EEecccccccccccCceEEEEECCCCCEEEEEE-----CCCCEEEE--ECCCC----ceEEEEecccCCCCCce
Confidence 88865432 2555 455555 99999999 77332 233333 6787654
No 27
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.95 E-value=8e-26 Score=201.77 Aligned_cols=177 Identities=23% Similarity=0.310 Sum_probs=144.1
Q ss_pred eeeeEEeeccCCCeEEEEE-----cC-CCCEEEEEeCCCcEEEEeCCC-------CeEEEEEeCCCCCeEEEEEecCCCE
Q psy8430 151 CYKIRSFSGHRDGVWDVAV-----RP-GQPVLGSASADRTVRLWSTQT-------GKCVLQYSGHSGSVNSVRFLPNKDL 217 (361)
Q Consensus 151 ~~~~~~l~~h~~~V~~l~~-----~~-~~~~l~s~s~d~~i~~wd~~~-------~~~~~~~~~h~~~v~~v~~~~~~~~ 217 (361)
..+..+|.+|.+.|++++| ++ ++.+|++|+.|++|++||+.. +.+...+.+|...|.+++|+|++.+
T Consensus 11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~ 90 (343)
T 2xzm_R 11 VVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF 90 (343)
T ss_dssp EEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred eeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE
Confidence 3567789999999999999 77 899999999999999999864 3567788999999999999999999
Q ss_pred EEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q psy8430 218 VLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANL 297 (361)
Q Consensus 218 l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~i 297 (361)
+++++.|++|++||++++ .....+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 91 l~s~s~D~~v~lwd~~~~--------------------------~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~ 144 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTG--------------------------TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKL 144 (343)
T ss_dssp EEEEETTSEEEEEETTSS--------------------------CEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEE
T ss_pred EEEEcCCCcEEEEECCCC--------------------------cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEE
Confidence 999999999999999765 256778899999999999999999999999999999
Q ss_pred eeCCCCeEEEEee---cCCCCCeEEEEEcCC-------------CcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 298 FDVETGTILQSLT---GHDEEPHILCVSSYY-------------SKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 298 wd~~~~~~~~~~~---~h~~~v~~~~~s~s~-------------~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
||+.. .+..... +|...+.++.+++.. ...+.||.|++| |. + ......+.+|...|
T Consensus 145 wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iw--d~---~--~~~~~~~~~h~~~v 216 (343)
T 2xzm_R 145 WNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVW--NT---N--FQIRYTFKAHESNV 216 (343)
T ss_dssp EESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEE--ET---T--TEEEEEEECCSSCE
T ss_pred EeccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEE--cC---C--CceeEEEcCccccc
Confidence 99984 4444333 566666664433221 112399999999 64 2 34567788887653
No 28
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.95 E-value=2e-25 Score=199.20 Aligned_cols=183 Identities=22% Similarity=0.288 Sum_probs=149.5
Q ss_pred eeeeccceeEEeeecCcc-----ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCe
Q psy8430 132 KLKVQTSKIVSSFKTSLL-----SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 206 (361)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v 206 (361)
...+..+..+..|..... .+.+...+.+|...|++++|+|++.++++|+.|++|++||+.+++.+..+.+|...|
T Consensus 42 l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v 121 (343)
T 2xzm_R 42 LISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEV 121 (343)
T ss_dssp EEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCE
T ss_pred EEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcE
Confidence 345555666777765432 356778899999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCC---
Q psy8430 207 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG--- 283 (361)
Q Consensus 207 ~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--- 283 (361)
.+++|+|++++|++++.|++|++||+...... ......+|...|.+++|+|++
T Consensus 122 ~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~------------------------~~~~~~~~~~~v~~~~~~~~~~~~ 177 (343)
T 2xzm_R 122 YSVAFSPDNRQILSAGAEREIKLWNILGECKF------------------------SSAEKENHSDWVSCVRYSPIMKSA 177 (343)
T ss_dssp EEEEECSSTTEEEEEETTSCEEEEESSSCEEE------------------------ECCTTTSCSSCEEEEEECCCCCSC
T ss_pred EEEEECCCCCEEEEEcCCCEEEEEeccCCcee------------------------eeecccCCCceeeeeeeccccccc
Confidence 99999999999999999999999998632100 011113688899999999987
Q ss_pred -------CEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCC
Q psy8430 284 -------EQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDC 341 (361)
Q Consensus 284 -------~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~ 341 (361)
.++++++.|+.|++|| ..+.....+.+|...|.++.+++.+. ..+.||.|+|| |+
T Consensus 178 ~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iw--d~ 242 (343)
T 2xzm_R 178 NKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIW--DI 242 (343)
T ss_dssp SCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEE--ES
T ss_pred cccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEE--EC
Confidence 7999999999999999 45678888999999998854444321 12399999999 66
No 29
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.95 E-value=6.4e-27 Score=206.51 Aligned_cols=174 Identities=19% Similarity=0.215 Sum_probs=137.5
Q ss_pred EeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCCCeEEEEEec--CCCEEEEEECCCcEEEEe
Q psy8430 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVHIWQ 231 (361)
Q Consensus 156 ~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~--~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~i~lwd 231 (361)
.+.+|.+.|++++|+|+|++|++|+.|++|++||+.++. .+..+.+|.+.|.+++|+| ++++|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 456999999999999999999999999999999998874 5678899999999999985 489999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEEEeeCCCCeE---E
Q psy8430 232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETGTI---L 306 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~~---~ 306 (361)
++++.. .....+.+|...|.+++|+|+ +.+|++|+.|+.|++||++++.. .
T Consensus 88 ~~~~~~------------------------~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~ 143 (316)
T 3bg1_A 88 EENGTW------------------------EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVK 143 (316)
T ss_dssp CSSSCC------------------------CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEEC
T ss_pred CCCCcc------------------------eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCccee
Confidence 875411 145567789999999999997 88999999999999999987632 3
Q ss_pred EEeecCCCCCeE-------------------------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 307 QSLTGHDEEPHI-------------------------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 307 ~~~~~h~~~v~~-------------------------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
..+.+|...+.+ ++++++ .|+.|+|| |+.+... ..++..|.+|.+.|
T Consensus 144 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs-----~D~~v~lW--d~~~~~~-~~~~~~l~~h~~~V 215 (316)
T 3bg1_A 144 KINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGG-----CDNLIKLW--KEEEDGQ-WKEEQKLEAHSDWV 215 (316)
T ss_dssp CBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCB-----TTSBCCEE--EECTTSC-EEEEECCBCCSSCE
T ss_pred eeeccccCCcceEEEccccCCccccccccccCccccceEEEec-----CCCeEEEE--EeCCCCc-cceeeecccCCCce
Confidence 455667766544 355666 99999999 7632221 35778899998753
No 30
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.94 E-value=7.9e-27 Score=210.60 Aligned_cols=201 Identities=17% Similarity=0.136 Sum_probs=155.4
Q ss_pred eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe---EEEEEeCCCCCeEEEEE
Q psy8430 135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK---CVLQYSGHSGSVNSVRF 211 (361)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~---~~~~~~~h~~~v~~v~~ 211 (361)
+..+..+..|.......+.+..+.+|.+.|++++|+|++++|++|+.|++|++||+.++. ....+.+|...|.+++|
T Consensus 29 ~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 108 (377)
T 3dwl_C 29 TTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRW 108 (377)
T ss_dssp CCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEEC
T ss_pred ecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEE
Confidence 334455555665544447788899999999999999999999999999999999999876 67778889999999999
Q ss_pred ecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC-CCCcEEEEEEcCCCCEEEEEe
Q psy8430 212 LPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVITAS 290 (361)
Q Consensus 212 ~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~ 290 (361)
+|++++|++++.|+.|++||+.++.. ......+.+ |...|.+++|+|++++|++++
T Consensus 109 ~~~~~~l~~~~~d~~i~iwd~~~~~~-----------------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 109 SPNEDKFAVGSGARVISVCYFEQEND-----------------------WWVSKHLKRPLRSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp CTTSSCCEEEESSSCEEECCC----------------------------CCCCEEECSSCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCCCEEEEEecCCeEEEEEECCccc-----------------------ceeeeEeecccCCCeEEEEEcCCCCEEEEEe
Confidence 99999999999999999999876521 113566666 999999999999999999999
Q ss_pred CCCcEEEeeCC------------------CCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcce
Q psy8430 291 WDRVANLFDVE------------------TGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIH 349 (361)
Q Consensus 291 ~d~~v~iwd~~------------------~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~ 349 (361)
.|+.|++||++ +++++..+ +|...|.++.+++.+. ..+.||.|+|| |+.++..+..
T Consensus 166 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iw--d~~~~~~~~~ 242 (377)
T 3dwl_C 166 ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIA--YPSAPEQPPR 242 (377)
T ss_dssp SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-C--EECSTTSCEE
T ss_pred CCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEE--ECCCCCCcce
Confidence 99999999985 46677777 8999999866655422 22489999999 8855555445
Q ss_pred eeeeecccccCC
Q psy8430 350 SVCVFQDIQSTG 361 (361)
Q Consensus 350 ~v~~~~~h~~~~ 361 (361)
.+..+.+|...|
T Consensus 243 ~~~~~~~~~~~v 254 (377)
T 3dwl_C 243 ALITVKLSQLPL 254 (377)
T ss_dssp ECCCEECSSSCE
T ss_pred eeEeecCCCCce
Confidence 578888887653
No 31
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=2e-25 Score=198.06 Aligned_cols=223 Identities=17% Similarity=0.212 Sum_probs=165.4
Q ss_pred eeeccceeEEeeecCcc--ceeeeEEeeccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCCC---------eEEEEE
Q psy8430 133 LKVQTSKIVSSFKTSLL--SCYKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTG---------KCVLQY 199 (361)
Q Consensus 133 ~~~~~~~~~~~~~~~~~--~~~~~~~l~~h~~~V~~l~~~~--~~~~l~s~s~d~~i~~wd~~~~---------~~~~~~ 199 (361)
+.+..+..+..|..... ..+.+..+.+|.+.|++++|+| ++.+|++|+.||+|++||+.++ +.+..+
T Consensus 27 ~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 106 (351)
T 3f3f_A 27 ATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTL 106 (351)
T ss_dssp EEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEE
T ss_pred EEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeee
Confidence 34455566667766543 3367888999999999999999 6999999999999999999887 668888
Q ss_pred eCCCCCeEEEEEecC--CCEEEEEECCCcEEEEeccccccccCCCCCCCCCC---------------CCCCC---CCce-
Q psy8430 200 SGHSGSVNSVRFLPN--KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDE---------------SKEPD---ESSI- 258 (361)
Q Consensus 200 ~~h~~~v~~v~~~~~--~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~---------------~~~~~---~~~~- 258 (361)
.+|...|.+++|+|+ +.++++++.||.|++||++++.............. ...+. ....
T Consensus 107 ~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~ 186 (351)
T 3f3f_A 107 NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLA 186 (351)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEE
T ss_pred cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEE
Confidence 899999999999999 99999999999999999987764432110000000 00000 0000
Q ss_pred ---------------ecccccEEEeCCCCcEEEEEEcCCC----CEEEEEeCCCcEEEeeCCCC----------------
Q psy8430 259 ---------------TLRTPVKELLGHSNVVIAADWLSDG----EQVITASWDRVANLFDVETG---------------- 303 (361)
Q Consensus 259 ---------------~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~s~~~d~~v~iwd~~~~---------------- 303 (361)
........+.+|...|.+++|+|++ .+|++|+.||.|++||++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 266 (351)
T 3f3f_A 187 VSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMF 266 (351)
T ss_dssp EEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------
T ss_pred EecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceecc
Confidence 0001255667899999999999998 89999999999999999875
Q ss_pred ------------------------------eEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCccee
Q psy8430 304 ------------------------------TILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHS 350 (361)
Q Consensus 304 ------------------------------~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~ 350 (361)
+.+..+.+|...|.++.+++... ..+.||.|+|| |+.++.. ..+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw--~~~~~~~-~~~ 343 (351)
T 3f3f_A 267 DNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLW--KATYSNE-FKC 343 (351)
T ss_dssp ------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEE--EECTTSC-EEE
T ss_pred CCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEE--ecCcCcc-hhh
Confidence 67788889999999965554422 22489999999 6655444 788
Q ss_pred eeeecccc
Q psy8430 351 VCVFQDIQ 358 (361)
Q Consensus 351 v~~~~~h~ 358 (361)
+.++..|+
T Consensus 344 ~~~~~~~~ 351 (351)
T 3f3f_A 344 MSVITAQQ 351 (351)
T ss_dssp EEEEC---
T ss_pred eeehcccC
Confidence 88888774
No 32
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.94 E-value=8.6e-25 Score=213.14 Aligned_cols=187 Identities=22% Similarity=0.315 Sum_probs=153.6
Q ss_pred eeeeccceeEEeeecCcc---ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEE
Q psy8430 132 KLKVQTSKIVSSFKTSLL---SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNS 208 (361)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~---~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~ 208 (361)
...+..+..+..|..... .+...+.+.+|.+.|.+++|+|++++|++|+.|++|++||+.++..+..+.+|...|.+
T Consensus 398 l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~ 477 (694)
T 3dm0_A 398 IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLS 477 (694)
T ss_dssp EEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred EEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEE
Confidence 345566667777765432 24567889999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCC--CEE
Q psy8430 209 VRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG--EQV 286 (361)
Q Consensus 209 v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l 286 (361)
++|+|+++.|++++.|++|++||+...... .......+|...|.+++|+|++ ..+
T Consensus 478 ~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~-----------------------~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 478 VAFSLDNRQIVSASRDRTIKLWNTLGECKY-----------------------TISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp EEECTTSSCEEEEETTSCEEEECTTSCEEE-----------------------EECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred EEEeCCCCEEEEEeCCCEEEEEECCCCcce-----------------------eeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 999999999999999999999997533110 0011124688999999999987 689
Q ss_pred EEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCC
Q psy8430 287 ITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGT 343 (361)
Q Consensus 287 ~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~ 343 (361)
++++.|++|++||++++++..++.+|.+.|.++.+++... +.+.||.|+|| |+.+
T Consensus 535 ~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iw--d~~~ 592 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLW--DLAE 592 (694)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEE--ETTT
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEE--ECCC
Confidence 9999999999999999999999999999999854444321 12399999999 7733
No 33
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=3.1e-25 Score=201.70 Aligned_cols=169 Identities=23% Similarity=0.375 Sum_probs=138.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCC
Q psy8430 163 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNND 242 (361)
Q Consensus 163 ~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~ 242 (361)
.|.+++|+|+|++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++..|++++.|++|++||++++.
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~------ 198 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ------ 198 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE------
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe------
Confidence 49999999999999999999999999999999999999999999999999999999999999999999997652
Q ss_pred CCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCCCCeEEEEe-------ecCCC
Q psy8430 243 NDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSL-------TGHDE 314 (361)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~-------~~h~~ 314 (361)
+...+ .+...+.+++|+| ++.++++|+.|+.|++||++++.++..+ .+|..
T Consensus 199 --------------------~~~~~-~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~ 257 (393)
T 1erj_A 199 --------------------CSLTL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD 257 (393)
T ss_dssp --------------------EEEEE-ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSS
T ss_pred --------------------eEEEE-EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCC
Confidence 23333 3567899999999 8999999999999999999999988777 57888
Q ss_pred CCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCC--------cceeeeeecccccC
Q psy8430 315 EPHILCVSSYYS---KVSCDLFQRIQHLDCGTSEN--------PIHSVCVFQDIQST 360 (361)
Q Consensus 315 ~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~--------~~~~v~~~~~h~~~ 360 (361)
.|.++.+++++. ..+.||.|++| |+.+... ...+...+.||+..
T Consensus 258 ~v~~v~~~~~g~~l~s~s~d~~v~~w--d~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 312 (393)
T 1erj_A 258 SVYSVVFTRDGQSVVSGSLDRSVKLW--NLQNANNKSDSKTPNSGTCEVTYIGHKDF 312 (393)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEE--EC---------------CEEEEEECCSSC
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEE--ECCCCCCcccccCCCCCcceEEEecccCc
Confidence 888854443321 12389999999 6643221 13456778888764
No 34
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.94 E-value=2.9e-25 Score=213.33 Aligned_cols=165 Identities=23% Similarity=0.347 Sum_probs=139.0
Q ss_pred eeeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy8430 151 CYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229 (361)
Q Consensus 151 ~~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~l 229 (361)
+..+.++.+|.+.|++++|+|++. .|++|+.|++|++||..+++++..+.+|...|.+++|+|++++|++++.|++|++
T Consensus 137 ~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~l 216 (611)
T 1nr0_A 137 GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVL 216 (611)
T ss_dssp CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEE
Confidence 345667899999999999999987 6999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccccccCCCCCCCCCCCCCCCCCceecccccEEE-------eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430 230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL-------LGHSNVVIAADWLSDGEQVITASWDRVANLFDVET 302 (361)
Q Consensus 230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 302 (361)
||+.++.. ...+ .+|.+.|.+++|+|+|++|++++.|++|++||+++
T Consensus 217 wd~~~g~~--------------------------~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 217 YNGVDGTK--------------------------TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT 270 (611)
T ss_dssp EETTTCCE--------------------------EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EECCCCcE--------------------------eeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence 99876532 2222 27999999999999999999999999999999998
Q ss_pred CeEEEEe-------------------------------------------ecCCCCCeEEEEEcCCC---cccCCCeEEE
Q psy8430 303 GTILQSL-------------------------------------------TGHDEEPHILCVSSYYS---KVSCDLFQRI 336 (361)
Q Consensus 303 ~~~~~~~-------------------------------------------~~h~~~v~~~~~s~s~~---~v~~dg~i~i 336 (361)
++++.++ .+|...|.++.+++++. ..+.||.|++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~ 350 (611)
T 1nr0_A 271 LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINS 350 (611)
T ss_dssp TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEE
Confidence 8765443 46777887754444322 1239999999
Q ss_pred EcCCCCC
Q psy8430 337 QHLDCGT 343 (361)
Q Consensus 337 W~~d~~~ 343 (361)
| |+.+
T Consensus 351 W--d~~~ 355 (611)
T 1nr0_A 351 W--DIST 355 (611)
T ss_dssp E--ETTT
T ss_pred E--ECCC
Confidence 9 7733
No 35
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.94 E-value=3.5e-26 Score=201.76 Aligned_cols=187 Identities=22% Similarity=0.247 Sum_probs=148.7
Q ss_pred eeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCCC--eEEEEEeCCCCCeE
Q psy8430 132 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVN 207 (361)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~--~~~~l~s~s~d~~i~~wd~~~~--~~~~~~~~h~~~v~ 207 (361)
...+..+..+..|........++.++.+|.+.|++++|+| ++.+|++|+.|++|++||+.++ .....+.+|...|.
T Consensus 28 lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~ 107 (316)
T 3bg1_A 28 LATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVN 107 (316)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCC
T ss_pred EEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceE
Confidence 3445566677777765555567888999999999999986 4889999999999999999887 46777889999999
Q ss_pred EEEEecC--CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC---
Q psy8430 208 SVRFLPN--KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--- 282 (361)
Q Consensus 208 ~v~~~~~--~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--- 282 (361)
+++|+|+ +.+|++|+.|++|++||++.+.. ......+.+|...|.+++|+|+
T Consensus 108 ~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~-----------------------~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 108 SVCWAPHDYGLILACGSSDGAISLLTYTGEGQ-----------------------WEVKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp EEEECCTTTCSCEEEECSSSCEEEEEECSSSC-----------------------EEECCBTTSSSSCBCCCEECCCCCC
T ss_pred EEEECCCCCCcEEEEEcCCCCEEEEecCCCCC-----------------------cceeeeeccccCCcceEEEccccCC
Confidence 9999997 78999999999999999865411 0112334578888999999987
Q ss_pred --------------CCEEEEEeCCCcEEEeeCCCC---eEEEEeecCCCCCeEEEEEcCC-------CcccCCCeEEEEc
Q psy8430 283 --------------GEQVITASWDRVANLFDVETG---TILQSLTGHDEEPHILCVSSYY-------SKVSCDLFQRIQH 338 (361)
Q Consensus 283 --------------~~~l~s~~~d~~v~iwd~~~~---~~~~~~~~h~~~v~~~~~s~s~-------~~v~~dg~i~iW~ 338 (361)
+.+|++|+.|+.|++||++.+ +++..+.+|...|.++.+++.+ ++.+.||+|+||
T Consensus 165 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw- 243 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW- 243 (316)
T ss_dssp ------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEE-
T ss_pred ccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEE-
Confidence 478999999999999999865 5778889999998875554431 112499999999
Q ss_pred CCCCC
Q psy8430 339 LDCGT 343 (361)
Q Consensus 339 ~d~~~ 343 (361)
|+.+
T Consensus 244 -~~~~ 247 (316)
T 3bg1_A 244 -TCDD 247 (316)
T ss_dssp -ECSS
T ss_pred -EccC
Confidence 6633
No 36
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.9e-25 Score=201.04 Aligned_cols=184 Identities=16% Similarity=0.191 Sum_probs=152.7
Q ss_pred eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC--CCeEEEEEeCCCCCeEEEEEecC--CCEEEEEECCCcE
Q psy8430 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ--TGKCVLQYSGHSGSVNSVRFLPN--KDLVLSASGDKSV 227 (361)
Q Consensus 152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~--~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~~~d~~i 227 (361)
+++..+.+|.+.|++++|+|++.+|++|+.||.|++||+. +++.+..+.+|...|.+++|+|+ +++|++++.||.|
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 4567889999999999999999999999999999999998 55777888999999999999976 8999999999999
Q ss_pred EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEEEeeCCCCe-
Q psy8430 228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETGT- 304 (361)
Q Consensus 228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~- 304 (361)
++||+.++.. .....+.+|...|.+++|+|+ +.++++++.|+.|++||++++.
T Consensus 82 ~iwd~~~~~~------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 137 (379)
T 3jrp_A 82 LIWKEENGRW------------------------SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT 137 (379)
T ss_dssp EEEEEETTEE------------------------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC
T ss_pred EEEEcCCCce------------------------eEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc
Confidence 9999876521 256677789999999999999 9999999999999999999873
Q ss_pred -EEEEeecCCCCCeEEEEEcC----------------CCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 305 -ILQSLTGHDEEPHILCVSSY----------------YSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 305 -~~~~~~~h~~~v~~~~~s~s----------------~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
....+.+|...|.++.+++. .+..+.||.|++| |++++.....++..+.+|.+.|
T Consensus 138 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~--d~~~~~~~~~~~~~~~~h~~~v 209 (379)
T 3jrp_A 138 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW--KYNSDAQTYVLESTLEGHSDWV 209 (379)
T ss_dssp CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEE--EEETTTTEEEEEEEECCCSSCE
T ss_pred eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEE--EecCCCcceeeEEEEecccCcE
Confidence 44566788888888776651 1123589999999 8765555456778888998653
No 37
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.94 E-value=8.7e-25 Score=199.23 Aligned_cols=183 Identities=22% Similarity=0.338 Sum_probs=150.4
Q ss_pred eccceeEEeeecCccc--eeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCC-------eEEEEEeCCCC
Q psy8430 135 VQTSKIVSSFKTSLLS--CYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTG-------KCVLQYSGHSG 204 (361)
Q Consensus 135 ~~~~~~~~~~~~~~~~--~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~-------~~~~~~~~h~~ 204 (361)
+..+..+.+|...... ...+..+.+|.+.|++++|+| ++.+|++|+.||+|++||+.++ +++..+.+|..
T Consensus 53 ~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~ 132 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTK 132 (402)
T ss_dssp CSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSS
T ss_pred EcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCC
Confidence 4555666667654322 145667889999999999999 9999999999999999999887 66788999999
Q ss_pred CeEEEEEecCC-CEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE--eCCCCcEEEEEEcC
Q psy8430 205 SVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL--LGHSNVVIAADWLS 281 (361)
Q Consensus 205 ~v~~v~~~~~~-~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~ 281 (361)
.|.+++|+|++ .+|++++.||.|++||+.++ .....+ .+|...|.+++|+|
T Consensus 133 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~--------------------------~~~~~~~~~~~~~~v~~~~~~~ 186 (402)
T 2aq5_A 133 RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG--------------------------AAVLTLGPDVHPDTIYSVDWSR 186 (402)
T ss_dssp CEEEEEECSSBTTEEEEEETTSCEEEEETTTT--------------------------EEEEEECTTTCCSCEEEEEECT
T ss_pred eEEEEEECcCCCCEEEEEcCCCEEEEEECCCC--------------------------CccEEEecCCCCCceEEEEECC
Confidence 99999999998 69999999999999999765 245666 68999999999999
Q ss_pred CCCEEEEEeCCCcEEEeeCCCCeEEEEe-ecCCCC-CeEEEEEcCCC--cc----cCCCeEEEEcCCCCCCC
Q psy8430 282 DGEQVITASWDRVANLFDVETGTILQSL-TGHDEE-PHILCVSSYYS--KV----SCDLFQRIQHLDCGTSE 345 (361)
Q Consensus 282 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~h~~~-v~~~~~s~s~~--~v----~~dg~i~iW~~d~~~~~ 345 (361)
++.+|++++.|+.|++||+++++.+..+ .+|.+. +..+.++++.. .+ +.|+.|++| |+.++.
T Consensus 187 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iw--d~~~~~ 256 (402)
T 2aq5_A 187 DGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALW--DTKHLE 256 (402)
T ss_dssp TSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEE--ETTBCS
T ss_pred CCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEE--cCcccc
Confidence 9999999999999999999999999998 678765 56544443311 11 289999999 774433
No 38
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.94 E-value=2e-24 Score=205.75 Aligned_cols=176 Identities=30% Similarity=0.446 Sum_probs=155.0
Q ss_pred ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy8430 150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229 (361)
Q Consensus 150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~l 229 (361)
+++++..+.+|...|.+++|+|+|.+|++++.|++|++||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 374 ~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~ 452 (577)
T 2ymu_A 374 NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKL 452 (577)
T ss_dssp TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEE
Confidence 45778889999999999999999999999999999999996 67788899999999999999999999999999999999
Q ss_pred EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEe
Q psy8430 230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 309 (361)
Q Consensus 230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 309 (361)
||.... ....+.+|...|.+++|+|++++|++++.|+.|++||. +++++..+
T Consensus 453 w~~~~~---------------------------~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~ 504 (577)
T 2ymu_A 453 WNRNGQ---------------------------LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL 504 (577)
T ss_dssp EETTSC---------------------------EEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEE
T ss_pred EECCCC---------------------------EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEE
Confidence 996432 56778899999999999999999999999999999995 68999999
Q ss_pred ecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 310 TGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 310 ~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
.+|...|.++.++++.. ..+.||.|+|| |. . ..++.++.||.+.|
T Consensus 505 ~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lw--d~---~--~~~~~~~~~h~~~v 552 (577)
T 2ymu_A 505 TGHSSSVRGVAFSPDGQTIASASDDKTVKLW--NR---N--GQLLQTLTGHSSSV 552 (577)
T ss_dssp ECCSSCEEEEEECTTSSCEEEEETTSEEEEE--CT---T--SCEEEEEECCSSCE
T ss_pred eCCCCCEEEEEEcCCCCEEEEEECcCEEEEE--eC---C--CCEEEEEcCCCCCE
Confidence 99999999966665522 23489999999 65 1 35688899998764
No 39
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.93 E-value=5.4e-25 Score=201.36 Aligned_cols=211 Identities=15% Similarity=0.107 Sum_probs=150.8
Q ss_pred eeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEE
Q psy8430 139 KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218 (361)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l 218 (361)
..+..|.. ...+....+.+|.+.|++++|+|++.+|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|
T Consensus 119 g~i~iwd~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 196 (420)
T 3vl1_A 119 GDIKVLDS--NFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNV 196 (420)
T ss_dssp SCEEEECT--TSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEE
T ss_pred CCEEEEeC--CCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEE
Confidence 33444443 4566777888999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEe
Q psy8430 219 LSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLF 298 (361)
Q Consensus 219 ~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iw 298 (361)
++++.|+.|++||++++................ ................+...+.+++|+|+++++++|+.||.|++|
T Consensus 197 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~ 274 (420)
T 3vl1_A 197 LSASLDGTIRLWECGTGTTIHTFNRKENPHDGV--NSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVH 274 (420)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECBTTBTTCCE--EEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEE
T ss_pred EEEcCCCcEEEeECCCCceeEEeecCCCCCCCc--cEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEE
Confidence 999999999999998764432211000000000 000000000000011234566667778999999999999999999
Q ss_pred eCCCCeEEEEee-cCCCCCeEEEEEcCCC----cccCCCeEEEEcCCCCCCCCcceeeeeecccc
Q psy8430 299 DVETGTILQSLT-GHDEEPHILCVSSYYS----KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQ 358 (361)
Q Consensus 299 d~~~~~~~~~~~-~h~~~v~~~~~s~s~~----~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~ 358 (361)
|+++++.+..+. .|...+.++.+++... ..+.||.|++| |+.++ ..++..+.+|.
T Consensus 275 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vw--d~~~~---~~~~~~~~~~~ 334 (420)
T 3vl1_A 275 NVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQW--DLRSP---ECPVGEFLINE 334 (420)
T ss_dssp ETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEE--ETTCT---TSCSEEEEEST
T ss_pred ECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEE--EcCCC---cCchhhhhccC
Confidence 999998887775 4788888855554421 12389999999 88333 33456666643
No 40
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.93 E-value=7.8e-25 Score=210.30 Aligned_cols=186 Identities=14% Similarity=0.128 Sum_probs=150.2
Q ss_pred eEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--eEEEEEeCCCCCeEEEEEecCCCE
Q psy8430 140 IVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNSVRFLPNKDL 217 (361)
Q Consensus 140 ~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~--~~~~~~~~h~~~v~~v~~~~~~~~ 217 (361)
.+..|.. .++.....+.+|.+.|++++|+|+|.+|++|+.|++|+|||+.++ .....+.+|.+.|.+++|+|+++.
T Consensus 40 ~v~l~~~--~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~ 117 (611)
T 1nr0_A 40 SVYTVPV--GSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKR 117 (611)
T ss_dssp EEEEEET--TCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCE
T ss_pred EEEEecC--CCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCE
Confidence 3444443 355678889999999999999999999999999999999999754 445678899999999999999999
Q ss_pred EEEEECC----CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCC-EEEEEeCC
Q psy8430 218 VLSASGD----KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWD 292 (361)
Q Consensus 218 l~s~~~d----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d 292 (361)
|++++.+ +.|++||... ....+.+|...|.+++|+|++. .|++|+.|
T Consensus 118 l~~~~~~~~~~~~v~~wd~~~----------------------------~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D 169 (611)
T 1nr0_A 118 IAAVGEGRERFGHVFLFDTGT----------------------------SNGNLTGQARAMNSVDFKPSRPFRIISGSDD 169 (611)
T ss_dssp EEEEECCSSCSEEEEETTTCC----------------------------BCBCCCCCSSCEEEEEECSSSSCEEEEEETT
T ss_pred EEEEECCCCceeEEEEeeCCC----------------------------CcceecCCCCCceEEEECCCCCeEEEEEeCC
Confidence 9998875 4788887431 3455779999999999999987 59999999
Q ss_pred CcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeec-------ccccCC
Q psy8430 293 RVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQ-------DIQSTG 361 (361)
Q Consensus 293 ~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~-------~h~~~~ 361 (361)
++|++||..+++++.++.+|...|.++.+++++. ..+.|+.|+|| |..+ ..++..+. +|.+.|
T Consensus 170 ~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lw--d~~~----g~~~~~~~~~~~~~~~h~~~V 242 (611)
T 1nr0_A 170 NTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLY--NGVD----GTKTGVFEDDSLKNVAHSGSV 242 (611)
T ss_dssp SCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE--ETTT----CCEEEECBCTTSSSCSSSSCE
T ss_pred CeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEE--ECCC----CcEeeeeccccccccccCCCE
Confidence 9999999999999999999999999855544321 22399999999 7733 33455553 787653
No 41
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.93 E-value=1.9e-24 Score=195.50 Aligned_cols=180 Identities=11% Similarity=0.071 Sum_probs=148.0
Q ss_pred ceeeeEEeeccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEec-CCCEEEEEECCC
Q psy8430 150 SCYKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLP-NKDLVLSASGDK 225 (361)
Q Consensus 150 ~~~~~~~l~~h~~~V~~l~~~~~~-~~l~s~s~d~~i~~wd~~~~~~~~~~~--~h~~~v~~v~~~~-~~~~l~s~~~d~ 225 (361)
.....+.+.+|.+.|++++|+|++ .+|++|+.|++|++||+.+++....+. +|...|.+++|+| ++.+|++++.|+
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred ccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 345667888999999999999999 899999999999999999887776665 6999999999999 789999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe---CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430 226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL---GHSNVVIAADWLSDGEQVITASWDRVANLFDVET 302 (361)
Q Consensus 226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 302 (361)
.|++||+... ....+. +|...|.+++|+|++.++++|+.|+.|++||+ +
T Consensus 142 ~i~iwd~~~~---------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~ 193 (383)
T 3ei3_B 142 ATTLRDFSGS---------------------------VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-D 193 (383)
T ss_dssp EEEEEETTSC---------------------------EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-T
T ss_pred EEEEEECCCC---------------------------ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-C
Confidence 9999998743 333443 34588999999999999999999999999999 5
Q ss_pred CeEEEEeecCCCCCeEEEEEcCCC----cccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430 303 GTILQSLTGHDEEPHILCVSSYYS----KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST 360 (361)
Q Consensus 303 ~~~~~~~~~h~~~v~~~~~s~s~~----~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~ 360 (361)
++++..+.+|...|.++.+++... ..+.||.|++| |+++.+....++..+ +|.+.
T Consensus 194 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw--d~~~~~~~~~~~~~~-~~~~~ 252 (383)
T 3ei3_B 194 GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLW--DLRNIKDKNSYIAEM-PHEKP 252 (383)
T ss_dssp SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEE--EGGGCCSTTCEEEEE-ECSSC
T ss_pred CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEE--eCCCCCcccceEEEe-cCCCc
Confidence 889999999999999855554421 12489999999 875544444555555 57654
No 42
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.93 E-value=2.5e-24 Score=205.15 Aligned_cols=159 Identities=33% Similarity=0.547 Sum_probs=143.8
Q ss_pred ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy8430 150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229 (361)
Q Consensus 150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~l 229 (361)
+++.+..+.+|.+.|++++|+|++.+|++++.|++|++||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 415 ~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~i 493 (577)
T 2ymu_A 415 NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKL 493 (577)
T ss_dssp TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEE
Confidence 45778899999999999999999999999999999999996 57788899999999999999999999999999999999
Q ss_pred EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEe
Q psy8430 230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 309 (361)
Q Consensus 230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 309 (361)
||... .....+.+|...|++++|+|+|++|++++.|+.|++||. +++++.++
T Consensus 494 w~~~~---------------------------~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~ 545 (577)
T 2ymu_A 494 WNRNG---------------------------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL 545 (577)
T ss_dssp EETTS---------------------------CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEE
T ss_pred EcCCC---------------------------CEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEE
Confidence 99642 267788999999999999999999999999999999995 68999999
Q ss_pred ecCCCCCeEEEEEcCCC---cccCCCeEEEE
Q psy8430 310 TGHDEEPHILCVSSYYS---KVSCDLFQRIQ 337 (361)
Q Consensus 310 ~~h~~~v~~~~~s~s~~---~v~~dg~i~iW 337 (361)
.+|...|.++.+++++. +.+.|++|++|
T Consensus 546 ~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 546 TGHSSSVWGVAFSPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp ECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEe
Confidence 99999999977776532 23589999999
No 43
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.93 E-value=1.9e-24 Score=210.77 Aligned_cols=178 Identities=21% Similarity=0.285 Sum_probs=145.5
Q ss_pred eeeEEeeccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCC-----CeEEEEEeCCCCCeEEEEEecCCCEEEEEECCC
Q psy8430 152 YKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQT-----GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK 225 (361)
Q Consensus 152 ~~~~~l~~h~~~V~~l~~~~~~-~~l~s~s~d~~i~~wd~~~-----~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~ 225 (361)
.....+.+|.+.|++++|+|++ .+|++||.|++|++||+.. +.....+.+|...|.+++|+|++++|++|+.||
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg 452 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG 452 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 3456788999999999999864 6999999999999999875 345678899999999999999999999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430 226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI 305 (361)
Q Consensus 226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 305 (361)
+|++||+.++ .....+.+|...|.+++|+|++++|++|+.|++|++||......
T Consensus 453 ~v~vwd~~~~--------------------------~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~ 506 (694)
T 3dm0_A 453 ELRLWDLAAG--------------------------VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK 506 (694)
T ss_dssp EEEEEETTTT--------------------------EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE
T ss_pred cEEEEECCCC--------------------------cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc
Confidence 9999998765 25677889999999999999999999999999999999875433
Q ss_pred EEEe---ecCCCCCeEEEEEcCC-----CcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 306 LQSL---TGHDEEPHILCVSSYY-----SKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 306 ~~~~---~~h~~~v~~~~~s~s~-----~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
.... .+|...|.++.+++.. .+.+.||.|+|| |+ +. ..++..+.+|.+.|
T Consensus 507 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vw--d~---~~-~~~~~~~~~h~~~v 564 (694)
T 3dm0_A 507 YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVW--NL---SN-CKLRSTLAGHTGYV 564 (694)
T ss_dssp EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEE--ET---TT-CCEEEEECCCSSCE
T ss_pred eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEE--EC---CC-CcEEEEEcCCCCCE
Confidence 3222 3577777775444331 112399999999 77 44 45678899998753
No 44
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.93 E-value=3.8e-24 Score=189.85 Aligned_cols=176 Identities=21% Similarity=0.260 Sum_probs=147.5
Q ss_pred cceeeeEEeeccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCC-----eEEEEEeCCCCCeEEEEEecCCCEEEEEE
Q psy8430 149 LSCYKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTG-----KCVLQYSGHSGSVNSVRFLPNKDLVLSAS 222 (361)
Q Consensus 149 ~~~~~~~~l~~h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~-----~~~~~~~~h~~~v~~v~~~~~~~~l~s~~ 222 (361)
.+..+..+|+||.+.|++|+|+|+ +++|+|||.|++|++||+.++ .+...+.+|...|.+++|+|++++|++++
T Consensus 26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~ 105 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS 105 (340)
T ss_dssp CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEc
Confidence 455677889999999999999997 679999999999999998754 45778899999999999999999999999
Q ss_pred CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430 223 GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET 302 (361)
Q Consensus 223 ~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 302 (361)
.|+.|++|+.... ........+...+..+.+++++.++++++.|+.+++||+..
T Consensus 106 ~d~~i~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~ 159 (340)
T 4aow_A 106 WDGTLRLWDLTTG--------------------------TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG 159 (340)
T ss_dssp TTSEEEEEETTTT--------------------------EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS
T ss_pred ccccceEEeeccc--------------------------ceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCC
Confidence 9999999998654 24555667888899999999999999999999999999986
Q ss_pred CeEE-EEeecCCCCCeE----------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 303 GTIL-QSLTGHDEEPHI----------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 303 ~~~~-~~~~~h~~~v~~----------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
.... ....+|...+.. ++++++ .|+.|++| |. +. ..++..+.+|++.|
T Consensus 160 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~-----~d~~i~i~--d~---~~-~~~~~~~~~h~~~v 218 (340)
T 4aow_A 160 VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG-----WDKLVKVW--NL---AN-CKLKTNHIGHTGYL 218 (340)
T ss_dssp CEEEEECSSSCSSCEEEEEECSCSSSCEEEEEE-----TTSCEEEE--ET---TT-TEEEEEECCCSSCE
T ss_pred CceEEEEeccccCcccceEEccCCCCcEEEEEc-----CCCEEEEE--EC---CC-CceeeEecCCCCcE
Confidence 5443 345667777776 445555 99999999 87 44 56788889998754
No 45
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.93 E-value=1.8e-24 Score=191.84 Aligned_cols=133 Identities=19% Similarity=0.230 Sum_probs=113.9
Q ss_pred EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC----eEEEEEeCCCCCeEEEEEec--CCCEEEEEECCCcEE
Q psy8430 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG----KCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKSVH 228 (361)
Q Consensus 155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~----~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~i~ 228 (361)
..+.+|.+.|++++|+|++.+|++|+.||+|++||+.++ +....+.+|...|.+++|+| ++.+|++++.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 346799999999999999999999999999999999876 56778889999999999999 599999999999999
Q ss_pred EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEEEeeCCCCe
Q psy8430 229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETGT 304 (361)
Q Consensus 229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~ 304 (361)
+||+..+.... ......+...+.+|...|.+++|+|+ +.++++++.||.|++||+++++
T Consensus 85 vwd~~~~~~~~-----------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 85 LWEEDPDQEEC-----------------SGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp EEEECTTSCTT-----------------SSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred EEecCCCcccc-----------------cccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 99997653211 01111356777889999999999999 9999999999999999987543
No 46
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.93 E-value=7.1e-25 Score=202.02 Aligned_cols=177 Identities=12% Similarity=0.006 Sum_probs=143.4
Q ss_pred eeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEe--CCCCCeEEEE
Q psy8430 134 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVR 210 (361)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~--~h~~~v~~v~ 210 (361)
.+..+..+..|............+.+|.+.|++|+|+| ++.+|++||.||+|++||++++....... .+...+.+++
T Consensus 137 sGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 216 (435)
T 4e54_B 137 VGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLD 216 (435)
T ss_dssp EEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEE
T ss_pred EEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEE
Confidence 34455567777776666677777889999999999998 78899999999999999998765433333 2345678999
Q ss_pred EecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCC-EEEEE
Q psy8430 211 FLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITA 289 (361)
Q Consensus 211 ~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~ 289 (361)
|+|++.+|++|+.||.|++||++.. .+..+.+|...|.+++|+|++. ++++|
T Consensus 217 ~~~~~~~l~~g~~dg~i~~wd~~~~---------------------------~~~~~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 217 VSASSRMVVTGDNVGNVILLNMDGK---------------------------ELWNLRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp EETTTTEEEEECSSSBEEEEESSSC---------------------------BCCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred ECCCCCEEEEEeCCCcEeeeccCcc---------------------------eeEEEecccceEEeeeecCCCceEEEEe
Confidence 9999999999999999999998643 4556678999999999999886 78899
Q ss_pred eCCCcEEEeeCCCCeEEEEe---ecCCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCC
Q psy8430 290 SWDRVANLFDVETGTILQSL---TGHDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTS 344 (361)
Q Consensus 290 ~~d~~v~iwd~~~~~~~~~~---~~h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~ 344 (361)
+.|+.|++||+++++....+ .+|...|.+ ++++++ .||.|+|| |+.++
T Consensus 270 s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~-----~D~~i~iw--d~~~~ 328 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTD-----QKSEIRVY--SASQW 328 (435)
T ss_dssp ETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEE-----SSSCEEEE--ESSSS
T ss_pred cCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEc-----CCCEEEEE--ECCCC
Confidence 99999999999987654433 568888887 566666 99999999 77443
No 47
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.93 E-value=1.8e-25 Score=205.92 Aligned_cols=180 Identities=15% Similarity=0.148 Sum_probs=140.2
Q ss_pred ceeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCCCeEEEEEec-CCCEEEEEECCC
Q psy8430 150 SCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLP-NKDLVLSASGDK 225 (361)
Q Consensus 150 ~~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~--~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~ 225 (361)
.........+|...|+||+|+| ++++||+|+.||+|+|||+.++. ....+.+|.+.|.+|+|+| ++.+|++|+.||
T Consensus 108 ~~~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~ 187 (435)
T 4e54_B 108 SYRILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG 187 (435)
T ss_dssp TTTSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS
T ss_pred ceeecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC
Confidence 3345566778999999999999 56799999999999999998764 3445568999999999998 688999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe---CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430 226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL---GHSNVVIAADWLSDGEQVITASWDRVANLFDVET 302 (361)
Q Consensus 226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 302 (361)
+|++||++++ ....+. .+...+.+++|+|++.+|++|+.||.|++||++
T Consensus 188 ~v~iwd~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~- 239 (435)
T 4e54_B 188 TTRLQDFKGN---------------------------ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD- 239 (435)
T ss_dssp CEEEEETTSC---------------------------EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-
T ss_pred EEEEeeccCC---------------------------ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-
Confidence 9999998754 222222 334567899999999999999999999999987
Q ss_pred CeEEEEeecCCCCCeEEEEEcCCC----cccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430 303 GTILQSLTGHDEEPHILCVSSYYS----KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST 360 (361)
Q Consensus 303 ~~~~~~~~~h~~~v~~~~~s~s~~----~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~ 360 (361)
++.+.++.+|...|.++.+++... ..+.||.|+|| |+++.+. ...+....+|...
T Consensus 240 ~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iw--d~~~~~~-~~~~~~~~~h~~~ 298 (435)
T 4e54_B 240 GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIW--DLRQVRG-KASFLYSLPHRHP 298 (435)
T ss_dssp SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEE--ETTTCCS-SSCCSBCCBCSSC
T ss_pred cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEE--ecccccc-cceEEEeeecccc
Confidence 567788899999998855543311 12389999999 7754443 2334445677654
No 48
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1e-24 Score=204.49 Aligned_cols=193 Identities=13% Similarity=0.075 Sum_probs=148.9
Q ss_pred cceeEEeeecCccce--eeeEEeeccCCCeEEEEEcCC------CCEEEEEeCCCcEEEEeCCCCeE-----------EE
Q psy8430 137 TSKIVSSFKTSLLSC--YKIRSFSGHRDGVWDVAVRPG------QPVLGSASADRTVRLWSTQTGKC-----------VL 197 (361)
Q Consensus 137 ~~~~~~~~~~~~~~~--~~~~~l~~h~~~V~~l~~~~~------~~~l~s~s~d~~i~~wd~~~~~~-----------~~ 197 (361)
.+..+..|....... ....++.+|.+.|++++|+|+ +.+||+|+.||+|++||+..+.. ..
T Consensus 181 ~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~ 260 (524)
T 2j04_B 181 HSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSL 260 (524)
T ss_dssp -CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSE
T ss_pred CCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceE
Confidence 344566666544332 223557788999999999996 57999999999999999976632 34
Q ss_pred EEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEE
Q psy8430 198 QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAA 277 (361)
Q Consensus 198 ~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 277 (361)
.+.+|...|.+++|+|+ ..|++|+.||+|++||++++. .+...+.+|...|.++
T Consensus 261 ~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~-------------------------~~~~~~~~H~~~V~sv 314 (524)
T 2j04_B 261 TLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPE-------------------------VPSFYDQVHDSYILSV 314 (524)
T ss_dssp EECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCS-------------------------SCSEEEECSSSCEEEE
T ss_pred EEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCC-------------------------CceEEeecccccEEEE
Confidence 67889999999999985 589999999999999997541 2456688999999999
Q ss_pred --EEcCCC-CEEEEEeCCCcEEEeeCCCCeEEEEeecCCC--CCeEEEEEcCC---CcccCCCeEEEEcCCCCCCCCcce
Q psy8430 278 --DWLSDG-EQVITASWDRVANLFDVETGTILQSLTGHDE--EPHILCVSSYY---SKVSCDLFQRIQHLDCGTSENPIH 349 (361)
Q Consensus 278 --~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~--~v~~~~~s~s~---~~v~~dg~i~iW~~d~~~~~~~~~ 349 (361)
+|+|+| .+|++|+.|++|+|||+++++++.++.+|.. .+.++.+++.. +..+.|++|+|| |+ +. ..
T Consensus 315 ~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lw--d~---~~-~~ 388 (524)
T 2j04_B 315 STAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAV--PS---RA-AF 388 (524)
T ss_dssp EEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEE--ET---TC-TT
T ss_pred EEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEE--EC---cc-cc
Confidence 578888 8999999999999999999988888877753 35554454431 112389999999 88 44 44
Q ss_pred eeeeecccccCC
Q psy8430 350 SVCVFQDIQSTG 361 (361)
Q Consensus 350 ~v~~~~~h~~~~ 361 (361)
++..+.||.+.|
T Consensus 389 ~~~~l~gH~~~V 400 (524)
T 2j04_B 389 AVHPLVSRETTI 400 (524)
T ss_dssp CCEEEEECSSCE
T ss_pred cceeeecCCCce
Confidence 567788898754
No 49
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.93 E-value=9.7e-24 Score=195.77 Aligned_cols=214 Identities=24% Similarity=0.359 Sum_probs=163.1
Q ss_pred eeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec
Q psy8430 134 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213 (361)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~ 213 (361)
.+..+..+..|.. .+++.+..+.+|.+.|++++|+|++ .|++|+.||+|++||+.+++.+..+.+|...|.+++|++
T Consensus 137 sgs~dg~i~vwd~--~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~ 213 (464)
T 3v7d_B 137 TGADDKMIRVYDS--INKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVE 213 (464)
T ss_dssp EEETTSCEEEEET--TTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEE
T ss_pred EEcCCCcEEEEEC--CCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEec
Confidence 3444455555554 4567889999999999999999988 999999999999999999999999999999999999995
Q ss_pred --CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC
Q psy8430 214 --NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW 291 (361)
Q Consensus 214 --~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 291 (361)
++.++++++.||.|++||+.+.................. ...........+.+|...+.++ ++++.++++|+.
T Consensus 214 ~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~ 288 (464)
T 3v7d_B 214 YKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFH---TPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSY 288 (464)
T ss_dssp SSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEES---CGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEET
T ss_pred CCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEee---ccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeC
Confidence 678999999999999999987644322111110000000 0001111356778899999887 558999999999
Q ss_pred CCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 292 DRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 292 d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
|+.|++||+++++++..+.+|...+.++.+++... ..+.||.|++| |+ +. ..++..+.+|...|
T Consensus 289 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vw--d~---~~-~~~~~~~~~h~~~v 355 (464)
T 3v7d_B 289 DNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIW--DL---EN-GELMYTLQGHTALV 355 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEE--ET---TT-TEEEEEECCCSSCE
T ss_pred CCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEE--EC---CC-CcEEEEEeCCCCcE
Confidence 99999999999999999999999998855544311 12399999999 77 43 56788999998754
No 50
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.93 E-value=7.1e-24 Score=190.48 Aligned_cols=199 Identities=16% Similarity=0.170 Sum_probs=159.2
Q ss_pred eeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE--EeCCCCCeEEEEE
Q psy8430 134 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ--YSGHSGSVNSVRF 211 (361)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~--~~~h~~~v~~v~~ 211 (361)
.+..+..+..|.......+.+..+.+|.+.|++++|+|++.+|++++.|+.|++||+.+++.... +..|...|.+++|
T Consensus 25 ~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~ 104 (372)
T 1k8k_C 25 ICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRW 104 (372)
T ss_dssp EECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEE
T ss_pred EEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEE
Confidence 34445666677666555568899999999999999999999999999999999999988865444 3679999999999
Q ss_pred ecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC
Q psy8430 212 LPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW 291 (361)
Q Consensus 212 ~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 291 (361)
+|++++|++++.|+.|++||+...... ........+|...|.+++|+|++.++++++.
T Consensus 105 ~~~~~~l~~~~~d~~v~i~d~~~~~~~----------------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 105 APNEKKFAVGSGSRVISICYFEQENDW----------------------WVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp CTTSSEEEEEETTSSEEEEEEETTTTE----------------------EEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCCCCEEEEEeCCCEEEEEEecCCCcc----------------------eeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 999999999999999999998765210 0012223568899999999999999999999
Q ss_pred CCcEEEeeC------------------CCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCccee
Q psy8430 292 DRVANLFDV------------------ETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHS 350 (361)
Q Consensus 292 d~~v~iwd~------------------~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~ 350 (361)
|+.|++||+ .+++++..+.+|...+.++.+++... ..+.||.|++| |+ +. ..+
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~--d~---~~-~~~ 236 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLA--DA---DK-KMA 236 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEE--EG---GG-TTE
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEE--EC---CC-Cce
Confidence 999999995 47889999999999998855544421 12389999999 77 33 456
Q ss_pred eeeecccccC
Q psy8430 351 VCVFQDIQST 360 (361)
Q Consensus 351 v~~~~~h~~~ 360 (361)
+..+.+|..+
T Consensus 237 ~~~~~~~~~~ 246 (372)
T 1k8k_C 237 VATLASETLP 246 (372)
T ss_dssp EEEEECSSCC
T ss_pred eEEEccCCCC
Confidence 7778888654
No 51
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.93 E-value=2.3e-24 Score=193.37 Aligned_cols=172 Identities=17% Similarity=0.189 Sum_probs=143.6
Q ss_pred eeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecC-
Q psy8430 139 KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPN- 214 (361)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~- 214 (361)
..+..|.. .+++.+..+.+|.+.|++++|+|++. ++++++.|++|++||+++++....+. .|...|.+++|+|+
T Consensus 161 g~v~iwd~--~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~ 238 (357)
T 4g56_B 161 FSVKVWDL--SQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEK 238 (357)
T ss_dssp SCEEEEET--TTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTS
T ss_pred CeEEEEEC--CCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcc
Confidence 33444433 45678889999999999999999875 89999999999999999887665543 57788999999997
Q ss_pred CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCC-CEEEEEeCCC
Q psy8430 215 KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-EQVITASWDR 293 (361)
Q Consensus 215 ~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~ 293 (361)
+.+|++|+.|+.|++||++++ .+...+.+|...|++++|+|++ .+|++|+.|+
T Consensus 239 ~~~la~g~~d~~i~~wd~~~~--------------------------~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~ 292 (357)
T 4g56_B 239 DDTFACGDETGNVSLVNIKNP--------------------------DSAQTSAVHSQNITGLAYSYHSSPFLASISEDC 292 (357)
T ss_dssp TTEEEEEESSSCEEEEESSCG--------------------------GGCEEECCCSSCEEEEEECSSSSCCEEEEETTS
T ss_pred cceEEEeecccceeEEECCCC--------------------------cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCC
Confidence 568899999999999999765 3667888999999999999987 5789999999
Q ss_pred cEEEeeCCCCeEEEEeecCCCCCeEEEEEcC----CCcccCCCeEEEEcCCC
Q psy8430 294 VANLFDVETGTILQSLTGHDEEPHILCVSSY----YSKVSCDLFQRIQHLDC 341 (361)
Q Consensus 294 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s----~~~v~~dg~i~iW~~d~ 341 (361)
+|+|||+++++++..+ +|.+.|.++.+++. +++.+.||.|++| |+
T Consensus 293 ~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW--~~ 341 (357)
T 4g56_B 293 TVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHH--HL 341 (357)
T ss_dssp CEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEE--EC
T ss_pred EEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEE--EC
Confidence 9999999999988765 79999999777642 1234699999999 66
No 52
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=5e-25 Score=200.30 Aligned_cols=216 Identities=13% Similarity=0.110 Sum_probs=138.6
Q ss_pred eeccceeEEeeecCccce---eeeEEeeccCCCeEEEEEcC--------CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC
Q psy8430 134 KVQTSKIVSSFKTSLLSC---YKIRSFSGHRDGVWDVAVRP--------GQPVLGSASADRTVRLWSTQTGKCVLQYSGH 202 (361)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~---~~~~~l~~h~~~V~~l~~~~--------~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h 202 (361)
.+..+..+..|....... ..+..+.||.+.|++++|+| ++++|++||.|++|+|||+.++.++..+.+|
T Consensus 106 s~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~ 185 (393)
T 4gq1_A 106 CVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPL 185 (393)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEEC
T ss_pred EEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCC
Confidence 344455566665544332 34566789999999999998 7889999999999999999988888888889
Q ss_pred CCCeEEEEEecCCC-EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEc-
Q psy8430 203 SGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL- 280 (361)
Q Consensus 203 ~~~v~~v~~~~~~~-~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~- 280 (361)
...|.+++|+|++. +|++++.|++|++||++++................... .............+|...+.++.|+
T Consensus 186 ~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s-~~~~~~~~~~~~~~~~~~v~~v~~~~ 264 (393)
T 4gq1_A 186 SSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLT-LNTLPLVNTCHSSGIASSLANVRWIG 264 (393)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEE-EESGGGC------CCSSSCSEEEEET
T ss_pred CCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEe-cccccceeeeecccccccceeeeeec
Confidence 99999999999874 79999999999999998775533221111110000000 0000011223345788899999987
Q ss_pred CCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE----------------------------EEEEcCCCcccCCC
Q psy8430 281 SDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI----------------------------LCVSSYYSKVSCDL 332 (361)
Q Consensus 281 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~----------------------------~~~s~s~~~v~~dg 332 (361)
|+|..+++++.|+++++||+.++.....+..|...+.. ++++++ .||
T Consensus 265 ~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs-----~Dg 339 (393)
T 4gq1_A 265 SDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHS-----QHG 339 (393)
T ss_dssp TTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEET-----TTT
T ss_pred CCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEEC-----CCC
Confidence 79999999999999999999988777666655544332 567777 999
Q ss_pred eEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 333 FQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 333 ~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
.|+|| |+.++ .++..+.+|..+|
T Consensus 340 ~V~lw--d~~~~----~~~~~~~~~~~~V 362 (393)
T 4gq1_A 340 LIQLI--NTYEK----DSNSIPIQLGMPI 362 (393)
T ss_dssp EEEEE--ETTCT----TCCEEEEECSSCE
T ss_pred EEEEE--ECCCC----cEEEEecCCCCcE
Confidence 99999 77333 3345566666543
No 53
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.7e-24 Score=199.33 Aligned_cols=199 Identities=15% Similarity=0.206 Sum_probs=149.2
Q ss_pred cceeeeEEe-eccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCC---Ce---EEEEEeCCCCCeEEEEEecCCCEEEE
Q psy8430 149 LSCYKIRSF-SGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQT---GK---CVLQYSGHSGSVNSVRFLPNKDLVLS 220 (361)
Q Consensus 149 ~~~~~~~~l-~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~---~~---~~~~~~~h~~~v~~v~~~~~~~~l~s 220 (361)
.+++++.++ .+|.+.|++++|+| ++.+|++|+.||+|++||+.+ +. ....+ +|...|.+++|+|++..|++
T Consensus 50 ~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s 128 (437)
T 3gre_A 50 LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAV 128 (437)
T ss_dssp CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEE
T ss_pred ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEE
Confidence 456778888 89999999999999 999999999999999999876 32 33444 49999999999999999999
Q ss_pred EECCCcEEEEecc---ccccccCCC-------------CCCCCC---------C-----CCCCC-CCce--ecccccEEE
Q psy8430 221 ASGDKSVHIWQAV---INWECLNND-------------NDSDLD---------E-----SKEPD-ESSI--TLRTPVKEL 267 (361)
Q Consensus 221 ~~~d~~i~lwd~~---~~~~~~~~~-------------~~~~~~---------~-----~~~~~-~~~~--~~~~~~~~~ 267 (361)
++.||.|++||+. .+....... ...... . ..... ...+ ....++..+
T Consensus 129 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 208 (437)
T 3gre_A 129 SSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQII 208 (437)
T ss_dssp EETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEE
Confidence 9999999999995 221111000 000000 0 00000 0011 122456667
Q ss_pred eC--CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee-cCCCCCeE------------EEEEcCCCcccCCC
Q psy8430 268 LG--HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT-GHDEEPHI------------LCVSSYYSKVSCDL 332 (361)
Q Consensus 268 ~~--~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-~h~~~v~~------------~~~s~s~~~v~~dg 332 (361)
.+ |...|++++|+|++.+|++|+.||.|++||+++++++.++. .|...|.+ ++++++ .||
T Consensus 209 ~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~-----~dg 283 (437)
T 3gre_A 209 ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGS-----SKT 283 (437)
T ss_dssp ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEES-----TTE
T ss_pred ccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEc-----CCC
Confidence 77 88999999999999999999999999999999999999886 67666666 456666 999
Q ss_pred eEEEEcCCCCCCCCcceeeeeeccccc
Q psy8430 333 FQRIQHLDCGTSENPIHSVCVFQDIQS 359 (361)
Q Consensus 333 ~i~iW~~d~~~~~~~~~~v~~~~~h~~ 359 (361)
.|+|| |+ +. ..++..+.+|..
T Consensus 284 ~i~iw--d~---~~-~~~~~~~~~~~~ 304 (437)
T 3gre_A 284 FLTIW--NF---VK-GHCQYAFINSDE 304 (437)
T ss_dssp EEEEE--ET---TT-TEEEEEEESSSS
T ss_pred cEEEE--Ec---CC-CcEEEEEEcCCC
Confidence 99999 77 43 566777887754
No 54
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=9.3e-24 Score=189.97 Aligned_cols=185 Identities=25% Similarity=0.318 Sum_probs=155.9
Q ss_pred eeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCCCeEEE
Q psy8430 134 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPG--QPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSV 209 (361)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~--~~~l~s~s~d~~i~~wd~~~~~--~~~~~~~h~~~v~~v 209 (361)
.+..+..+..|.....+.+.+..+.+|.+.|++++|+++ +.+|++|+.||+|++||+.+++ .+..+.+|...|.++
T Consensus 28 ~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~ 107 (379)
T 3jrp_A 28 TCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSV 107 (379)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred EEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEE
Confidence 444556677777766788889999999999999999987 8999999999999999999986 778888899999999
Q ss_pred EEecC--CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC------
Q psy8430 210 RFLPN--KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS------ 281 (361)
Q Consensus 210 ~~~~~--~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------ 281 (361)
+|+|+ +.+|++++.|+.|++||+..... .....+.+|...|.+++|+|
T Consensus 108 ~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 108 QWAPHEYGPLLLVASSDGKVSVVEFKENGT------------------------TSPIIIDAHAIGVNSASWAPATIEED 163 (379)
T ss_dssp EECCGGGCSEEEEEETTSEEEEEECCTTSC------------------------CCEEEEECCTTCEEEEEECCCC----
T ss_pred EeCCCCCCCEEEEecCCCcEEEEecCCCCc------------------------eeeEEecCCCCceEEEEEcCcccccc
Confidence 99999 99999999999999999976521 13446678999999999999
Q ss_pred -------CCCEEEEEeCCCcEEEeeCCCCe----EEEEeecCCCCCeEEEEEcC---CC---cccCCCeEEEEcCCCCCC
Q psy8430 282 -------DGEQVITASWDRVANLFDVETGT----ILQSLTGHDEEPHILCVSSY---YS---KVSCDLFQRIQHLDCGTS 344 (361)
Q Consensus 282 -------~~~~l~s~~~d~~v~iwd~~~~~----~~~~~~~h~~~v~~~~~s~s---~~---~v~~dg~i~iW~~d~~~~ 344 (361)
++.++++++.|+.|++||++++. ++..+.+|...|.++.+++. .. ..+.||.|+|| |+.++
T Consensus 164 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iw--d~~~~ 241 (379)
T 3jrp_A 164 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW--TQDNE 241 (379)
T ss_dssp ------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE--EESST
T ss_pred ccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEE--eCCCC
Confidence 69999999999999999998754 55678889998888777654 12 23589999999 76443
No 55
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.93 E-value=1.3e-23 Score=189.01 Aligned_cols=178 Identities=16% Similarity=0.146 Sum_probs=139.9
Q ss_pred ccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE--EEeCCCCCeEEEEEec
Q psy8430 136 QTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL--QYSGHSGSVNSVRFLP 213 (361)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~--~~~~h~~~v~~v~~~~ 213 (361)
..+..+..|... +++.+..+. |.+.|.+++|+|+|.+|++++.| .+++|+..++..+. ...+|...|.+++|+|
T Consensus 154 ~~d~~i~iwd~~--~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fsp 229 (365)
T 4h5i_A 154 KVPAIMRIIDPS--DLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIA 229 (365)
T ss_dssp CSSCEEEEEETT--TTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEE
T ss_pred CCCCEEEEeECC--CCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcC
Confidence 344566666654 455566665 77889999999999999999855 56667766776543 3456889999999999
Q ss_pred CCCEEEEEECCC----cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy8430 214 NKDLVLSASGDK----SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA 289 (361)
Q Consensus 214 ~~~~l~s~~~d~----~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 289 (361)
++..+++++.|+ .+++|++..... .......+.+|...|++++|+|+|++|++|
T Consensus 230 dg~~l~~~s~d~~~~~~i~~~~~~~~~~----------------------~~~~~~~~~~~~~~V~~~~~Spdg~~lasg 287 (365)
T 4h5i_A 230 DDTVLIAASLKKGKGIVLTKISIKSGNT----------------------SVLRSKQVTNRFKGITSMDVDMKGELAVLA 287 (365)
T ss_dssp TTEEEEEEEESSSCCEEEEEEEEETTEE----------------------EEEEEEEEESSCSCEEEEEECTTSCEEEEE
T ss_pred CCCEEEEEecCCcceeEEeeccccccee----------------------cceeeeeecCCCCCeEeEEECCCCCceEEE
Confidence 999999999887 578888754421 112345678899999999999999999999
Q ss_pred eCCCcEEEeeCCCCeEEEEe-ecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCC
Q psy8430 290 SWDRVANLFDVETGTILQSL-TGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDC 341 (361)
Q Consensus 290 ~~d~~v~iwd~~~~~~~~~~-~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~ 341 (361)
+.|++|+|||+++++++.++ .+|...|+++.+++++. +.+.|++|||| |+
T Consensus 288 s~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw--~i 341 (365)
T 4h5i_A 288 SNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHII--KL 341 (365)
T ss_dssp ETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEE--EC
T ss_pred cCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEE--Ec
Confidence 99999999999999999885 78999999965555422 23499999999 55
No 56
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.92 E-value=8.2e-24 Score=189.42 Aligned_cols=192 Identities=20% Similarity=0.344 Sum_probs=150.4
Q ss_pred eEEeeecCccceeeeEEeec-----cCCCeEEEEEcCC----CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEE
Q psy8430 140 IVSSFKTSLLSCYKIRSFSG-----HRDGVWDVAVRPG----QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210 (361)
Q Consensus 140 ~~~~~~~~~~~~~~~~~l~~-----h~~~V~~l~~~~~----~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~ 210 (361)
.+..|.... ++.+..+.. |.+.|++++|+|+ +.+|++|+.||.|++||+.+++.+..+.+|...|.+++
T Consensus 45 ~v~vw~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~ 122 (366)
T 3k26_A 45 RVTLYECHS--QGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELK 122 (366)
T ss_dssp EEEEEEECG--GGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEE
T ss_pred EEEEEEcCC--CcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEE
Confidence 455555543 233333433 6688999999998 67999999999999999999999999999999999999
Q ss_pred Eec-CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE---eCCCCcEEEEEEcCCCCEE
Q psy8430 211 FLP-NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL---LGHSNVVIAADWLSDGEQV 286 (361)
Q Consensus 211 ~~~-~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l 286 (361)
|+| ++.+|++++.||.|++||++++. ....+ .+|...|.+++|+|++.++
T Consensus 123 ~~~~~~~~l~s~~~dg~i~iwd~~~~~--------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l 176 (366)
T 3k26_A 123 FHPRDPNLLLSVSKDHALRLWNIQTDT--------------------------LVAIFGGVEGHRDEVLSADYDLLGEKI 176 (366)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTTTE--------------------------EEEEECSTTSCSSCEEEEEECTTSSEE
T ss_pred ECCCCCCEEEEEeCCCeEEEEEeecCe--------------------------EEEEecccccccCceeEEEECCCCCEE
Confidence 999 89999999999999999997652 34444 5799999999999999999
Q ss_pred EEEeCCCcEEEeeCCCCeEEEEeec----------------------------CCCCCeEEEEEcCCC-cccCCCeEEEE
Q psy8430 287 ITASWDRVANLFDVETGTILQSLTG----------------------------HDEEPHILCVSSYYS-KVSCDLFQRIQ 337 (361)
Q Consensus 287 ~s~~~d~~v~iwd~~~~~~~~~~~~----------------------------h~~~v~~~~~s~s~~-~v~~dg~i~iW 337 (361)
++++.||.|++||+++++.+..+.. |...|.++.+++..+ ..+.||.|++|
T Consensus 177 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~w 256 (366)
T 3k26_A 177 MSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCW 256 (366)
T ss_dssp EEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEE
T ss_pred EEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEE
Confidence 9999999999999998766544433 888888754443211 12389999999
Q ss_pred cCCCCCCCC----------cceeeeeecccccCC
Q psy8430 338 HLDCGTSEN----------PIHSVCVFQDIQSTG 361 (361)
Q Consensus 338 ~~d~~~~~~----------~~~~v~~~~~h~~~~ 361 (361)
|+.++.. ...++..+.+|...|
T Consensus 257 --d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 288 (366)
T 3k26_A 257 --KPGKMEDDIDKIKPSESNVTILGRFDYSQCDI 288 (366)
T ss_dssp --EESSTTCCGGGCCTTCCCEEEEEEEECSSCCS
T ss_pred --eCCCccccccccccCCcchheeccccccCCcE
Confidence 7744332 124577788887643
No 57
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.92 E-value=7.9e-24 Score=183.76 Aligned_cols=158 Identities=9% Similarity=-0.024 Sum_probs=124.5
Q ss_pred cceeeeEEeeccCCCeEEEEEcC---CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCC---CCeEEEEEecCCCEE----
Q psy8430 149 LSCYKIRSFSGHRDGVWDVAVRP---GQPVLGSASADRTVRLWSTQTGKCVLQYSGHS---GSVNSVRFLPNKDLV---- 218 (361)
Q Consensus 149 ~~~~~~~~l~~h~~~V~~l~~~~---~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~---~~v~~v~~~~~~~~l---- 218 (361)
.+++.+..+.+|...++.++|++ ++.+|++|+.|++|+|||+.+|+++.++.+|. ..|.+++|+|+|.++
T Consensus 166 ~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s 245 (356)
T 2w18_A 166 EDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLS 245 (356)
T ss_dssp TTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC
T ss_pred CCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEec
Confidence 44677788889999999999988 67899999999999999999999999998754 468888999999876
Q ss_pred --------EEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE-----eCCCCcEEEEEEcCCCCE
Q psy8430 219 --------LSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL-----LGHSNVVIAADWLSDGEQ 285 (361)
Q Consensus 219 --------~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~ 285 (361)
++|+.|++|++||+.++..+ ..+ .+|...+.+..+ ++.+
T Consensus 246 ~~~~~w~laSGs~D~tIklWd~~tgk~l--------------------------~v~~~~~p~Gh~~~~lsg~~--sg~~ 297 (356)
T 2w18_A 246 HPCAKESESLRSPVFQLIVINPKTTLSV--------------------------GVMLYCLPPGQAGRFLEGDV--KDHC 297 (356)
T ss_dssp ------------CCEEEEEEETTTTEEE--------------------------EEEEECCCTTCCCCEEEEEE--ETTE
T ss_pred cCCCcceeeccCCCcEEEEEECCCCEEE--------------------------EEEEeeccCCCcceeEcccc--CCCE
Confidence 56888999999999876432 121 356655555455 4889
Q ss_pred EEEEeCCCcEEEeeCCCCeEEEEeecCCCCCe-E--------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430 286 VITASWDRVANLFDVETGTILQSLTGHDEEPH-I--------LCVSSYYSKVSCDLFQRIQHLDC 341 (361)
Q Consensus 286 l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~-~--------~~~s~s~~~v~~dg~i~iW~~d~ 341 (361)
+++++.|++|+|||+.+|+++.++.+|...+. . +++||+ .|++|||| |+
T Consensus 298 lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS-----~D~TIklW--d~ 355 (356)
T 2w18_A 298 AAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQ-----KDGNIFVY--HY 355 (356)
T ss_dssp EEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEEC-----TTSCEEEE--EE
T ss_pred EEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEE-----CCCcEEEe--cC
Confidence 99999999999999999999999999876544 3 455555 99999999 64
No 58
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2e-23 Score=186.98 Aligned_cols=172 Identities=16% Similarity=0.218 Sum_probs=145.6
Q ss_pred eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231 (361)
Q Consensus 152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd 231 (361)
.....+.+|.+.|++++|+|++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWD 102 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 44566889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEeeCCCCe--
Q psy8430 232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-----RVANLFDVETGT-- 304 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~-- 304 (361)
+.++. ....+. +...+.+++|+|++.++++++.+ +.|++||+.++.
T Consensus 103 ~~~~~--------------------------~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~ 155 (369)
T 3zwl_B 103 VSNGQ--------------------------CVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSAT 155 (369)
T ss_dssp TTTCC--------------------------EEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTT
T ss_pred CCCCc--------------------------EEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccc
Confidence 97652 344444 88899999999999999999999 999999998653
Q ss_pred ---------EEEEeecCCC--CCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430 305 ---------ILQSLTGHDE--EPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST 360 (361)
Q Consensus 305 ---------~~~~~~~h~~--~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~ 360 (361)
.+..+..|.. .+.+ ++++++ .||.|++| |+ +....++..+.+|...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~dg~i~i~--d~---~~~~~~~~~~~~~~~~ 220 (369)
T 3zwl_B 156 HELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH-----KDGKISKY--DV---SNNYEYVDSIDLHEKS 220 (369)
T ss_dssp CCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE-----TTSEEEEE--ET---TTTTEEEEEEECCSSC
T ss_pred eeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc-----CCCEEEEE--EC---CCCcEeEEEEecCCCc
Confidence 3445555555 5555 455555 89999999 88 4445677788888764
No 59
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.92 E-value=1.8e-23 Score=192.38 Aligned_cols=186 Identities=21% Similarity=0.268 Sum_probs=152.0
Q ss_pred eeeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeE-------EEEEeCCCCCeEEEEEec-CCCEEEEE
Q psy8430 151 CYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKC-------VLQYSGHSGSVNSVRFLP-NKDLVLSA 221 (361)
Q Consensus 151 ~~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~-------~~~~~~h~~~v~~v~~~~-~~~~l~s~ 221 (361)
+..+..+.+|.+.|++++|+|++. +|++|+.||+|++||+..+.. ...+.+|...|.+++|+| ++.+|+++
T Consensus 171 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~ 250 (430)
T 2xyi_A 171 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSV 250 (430)
T ss_dssp CCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEE
T ss_pred CCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEE
Confidence 678889999999999999999988 999999999999999987421 456778999999999999 77899999
Q ss_pred ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEeeC
Q psy8430 222 SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLFDV 300 (361)
Q Consensus 222 ~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~ 300 (361)
+.||.|++||++++.. ..+...+..|...|++++|+|++. ++++|+.||.|++||+
T Consensus 251 ~~dg~i~i~d~~~~~~-----------------------~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~ 307 (430)
T 2xyi_A 251 ADDQKLMIWDTRNNNT-----------------------SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 307 (430)
T ss_dssp ETTSEEEEEETTCSCS-----------------------SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred eCCCeEEEEECCCCCC-----------------------CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeC
Confidence 9999999999986421 125667778999999999999987 6889999999999999
Q ss_pred CC-CeEEEEeecCCCCCeEEEEEcCCC----cccCCCeEEEEcCCCCCCCC----------cceeeeeecccccCC
Q psy8430 301 ET-GTILQSLTGHDEEPHILCVSSYYS----KVSCDLFQRIQHLDCGTSEN----------PIHSVCVFQDIQSTG 361 (361)
Q Consensus 301 ~~-~~~~~~~~~h~~~v~~~~~s~s~~----~v~~dg~i~iW~~d~~~~~~----------~~~~v~~~~~h~~~~ 361 (361)
++ +.++..+.+|...|.++.+++... ..+.||.|+|| |+..... +..++..+.+|.+.|
T Consensus 308 ~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 381 (430)
T 2xyi_A 308 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW--DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 381 (430)
T ss_dssp TCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEE--EGGGTTCCCCHHHHHHCCTTEEEECCCCSSCE
T ss_pred CCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEE--eCCCCccccCccccccCCcceEEEcCCCCCCc
Confidence 98 577889999999999855554421 12389999999 6633211 125677888887643
No 60
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.92 E-value=8.7e-24 Score=189.27 Aligned_cols=140 Identities=23% Similarity=0.347 Sum_probs=123.0
Q ss_pred CccceeeeEEeeccCCCeEEEEEcCC---CCEEEEEeCCCcEEEEeCCC-CeEE-EEEeCCCCCeEEEEEecCCCEEEEE
Q psy8430 147 SLLSCYKIRSFSGHRDGVWDVAVRPG---QPVLGSASADRTVRLWSTQT-GKCV-LQYSGHSGSVNSVRFLPNKDLVLSA 221 (361)
Q Consensus 147 ~~~~~~~~~~l~~h~~~V~~l~~~~~---~~~l~s~s~d~~i~~wd~~~-~~~~-~~~~~h~~~v~~v~~~~~~~~l~s~ 221 (361)
.....+.+..+.+|.+.|++++|+|+ |.+|++|+.||.|++||+.+ +..+ ..+.+|...|.+++|+|++++|+++
T Consensus 25 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTA 104 (368)
T ss_dssp SSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred CCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEE
Confidence 33455677788899999999999998 69999999999999999987 5544 7788999999999999999999999
Q ss_pred ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEE--cCCCCEEEEEeCCCcEEEee
Q psy8430 222 SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW--LSDGEQVITASWDRVANLFD 299 (361)
Q Consensus 222 ~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~s~~~d~~v~iwd 299 (361)
+.||.|++||+.++ ....+.+|...|.+++| +|++.++++++.||.|++||
T Consensus 105 ~~dg~v~iwd~~~~---------------------------~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd 157 (368)
T 3mmy_A 105 SCDKTAKMWDLSSN---------------------------QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWD 157 (368)
T ss_dssp ETTSEEEEEETTTT---------------------------EEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEEC
T ss_pred cCCCcEEEEEcCCC---------------------------CceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEE
Confidence 99999999999765 23345679999999999 89999999999999999999
Q ss_pred CCCCeEEEEeecCC
Q psy8430 300 VETGTILQSLTGHD 313 (361)
Q Consensus 300 ~~~~~~~~~~~~h~ 313 (361)
+++++++..+..+.
T Consensus 158 ~~~~~~~~~~~~~~ 171 (368)
T 3mmy_A 158 TRSSNPMMVLQLPE 171 (368)
T ss_dssp SSCSSCSEEEECSS
T ss_pred CCCCcEEEEEecCC
Confidence 99998887777554
No 61
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.92 E-value=3.3e-23 Score=187.34 Aligned_cols=183 Identities=9% Similarity=0.019 Sum_probs=149.6
Q ss_pred eeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC---CCCeE
Q psy8430 132 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGH---SGSVN 207 (361)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h---~~~v~ 207 (361)
.+.+..+..+..|............+.+|.+.|.+++|+| ++.+|++++.|++|++||+.. ..+..+..+ ...|.
T Consensus 89 l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~ 167 (383)
T 3ei3_B 89 VAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYC 167 (383)
T ss_dssp EEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEE
T ss_pred EEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeE
Confidence 3344555667777776665555555568999999999999 788999999999999999985 555566544 48899
Q ss_pred EEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCC-EE
Q psy8430 208 SVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QV 286 (361)
Q Consensus 208 ~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l 286 (361)
+++|+|+++.|++++.|+.|++||++.. ++..+.+|...|.+++|+|+++ ++
T Consensus 168 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~---------------------------~~~~~~~h~~~v~~~~~~~~~~~~l 220 (383)
T 3ei3_B 168 CVDVSVSRQMLATGDSTGRLLLLGLDGH---------------------------EIFKEKLHKAKVTHAEFNPRCDWLM 220 (383)
T ss_dssp EEEEETTTTEEEEEETTSEEEEEETTSC---------------------------EEEEEECSSSCEEEEEECSSCTTEE
T ss_pred EEEECCCCCEEEEECCCCCEEEEECCCC---------------------------EEEEeccCCCcEEEEEECCCCCCEE
Confidence 9999999999999999999999998422 6778889999999999999999 99
Q ss_pred EEEeCCCcEEEeeCCC----CeEEEEeecCCCCCeEEEEEc-CCC---cccCCCeEEEEcCCCCCCC
Q psy8430 287 ITASWDRVANLFDVET----GTILQSLTGHDEEPHILCVSS-YYS---KVSCDLFQRIQHLDCGTSE 345 (361)
Q Consensus 287 ~s~~~d~~v~iwd~~~----~~~~~~~~~h~~~v~~~~~s~-s~~---~v~~dg~i~iW~~d~~~~~ 345 (361)
++++.|+.|++||+++ +.++..+ +|...+.++.+++ ... ..+.||.|++| |+.++.
T Consensus 221 ~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iw--d~~~~~ 284 (383)
T 3ei3_B 221 ATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVY--SSYDWS 284 (383)
T ss_dssp EEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEE--ETTBTT
T ss_pred EEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEE--ECCCCc
Confidence 9999999999999998 6677777 6889998877766 422 23589999999 774433
No 62
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.92 E-value=4.2e-23 Score=188.04 Aligned_cols=178 Identities=21% Similarity=0.211 Sum_probs=143.4
Q ss_pred ceeEEeeecCccce-----eeeEEeeccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCeEEEEE--eCCCCCeEEE
Q psy8430 138 SKIVSSFKTSLLSC-----YKIRSFSGHRDGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQY--SGHSGSVNSV 209 (361)
Q Consensus 138 ~~~~~~~~~~~~~~-----~~~~~l~~h~~~V~~l~~~~~~-~~l~s~s~d~~i~~wd~~~~~~~~~~--~~h~~~v~~v 209 (361)
+..+..|....... +.+..+.+|.+.|++++|+|++ .+|++|+.|++|++||+.+++.+..+ .+|...|.++
T Consensus 103 dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 182 (402)
T 2aq5_A 103 DCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSV 182 (402)
T ss_dssp TSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEE
T ss_pred CCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEE
Confidence 34455555544332 6688899999999999999998 69999999999999999999999999 7899999999
Q ss_pred EEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCc-EEEEEEcCCCCEEE
Q psy8430 210 RFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNV-VIAADWLSDGEQVI 287 (361)
Q Consensus 210 ~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~ 287 (361)
+|+|++.+|++++.||.|++||++++. .+..+ .+|.+. +.++.|+|++.+++
T Consensus 183 ~~~~~~~~l~~~~~d~~i~iwd~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~ 236 (402)
T 2aq5_A 183 DWSRDGALICTSCRDKRVRVIEPRKGT--------------------------VVAEKDRPHEGTRPVHAVFVSEGKILT 236 (402)
T ss_dssp EECTTSSCEEEEETTSEEEEEETTTTE--------------------------EEEEEECSSCSSSCCEEEECSTTEEEE
T ss_pred EECCCCCEEEEEecCCcEEEEeCCCCc--------------------------eeeeeccCCCCCcceEEEEcCCCcEEE
Confidence 999999999999999999999997652 45555 677765 89999999999999
Q ss_pred EE---eCCCcEEEeeCCCCeE-EEEee-cCCCCCeEEEEEcCCC--cc--cCCCeEEEEcCCCCC
Q psy8430 288 TA---SWDRVANLFDVETGTI-LQSLT-GHDEEPHILCVSSYYS--KV--SCDLFQRIQHLDCGT 343 (361)
Q Consensus 288 s~---~~d~~v~iwd~~~~~~-~~~~~-~h~~~v~~~~~s~s~~--~v--~~dg~i~iW~~d~~~ 343 (361)
+| +.|+.|++||++++.. +.... .|...+.++.+++... ++ +.||.|++| |+.+
T Consensus 237 ~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~--d~~~ 299 (402)
T 2aq5_A 237 TGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYF--EITS 299 (402)
T ss_dssp EEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEE--EECS
T ss_pred EeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEE--EecC
Confidence 99 7999999999998764 33333 4666677755554421 11 279999999 7744
No 63
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.92 E-value=9.3e-23 Score=186.95 Aligned_cols=155 Identities=21% Similarity=0.281 Sum_probs=125.2
Q ss_pred cceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC
Q psy8430 137 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216 (361)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~ 216 (361)
.+..+..|.........+..+.+|...|++|+|+|+|.+|++|+.||+|++||+.+++.+..+.+|...|.++.|+ +.
T Consensus 123 ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~ 200 (420)
T 4gga_A 123 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SY 200 (420)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TT
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CC
Confidence 3455666666554444444556788999999999999999999999999999999999999999999999998885 67
Q ss_pred EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy8430 217 LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVAN 296 (361)
Q Consensus 217 ~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~ 296 (361)
.+++|+.|+.+++||..... ..+..+.+|...+..+.|+|++.++++++.|+.++
T Consensus 201 ~l~sgs~d~~i~~~d~~~~~-------------------------~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~ 255 (420)
T 4gga_A 201 ILSSGSRSGHIHHHDVRVAE-------------------------HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVN 255 (420)
T ss_dssp EEEEEETTSEEEEEETTSSS-------------------------CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEEEeCCCceeEeeecccc-------------------------eeeEEecccccceeeeeecCCCCeeeeeeccccce
Confidence 99999999999999986542 25667788999999999999999999999888888
Q ss_pred EeeCCCCe----EEEEeecCCCCCeE
Q psy8430 297 LFDVETGT----ILQSLTGHDEEPHI 318 (361)
Q Consensus 297 iwd~~~~~----~~~~~~~h~~~v~~ 318 (361)
+||..+++ .+.....|...|.+
T Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~V~~ 281 (420)
T 4gga_A 256 VWPSAPGEGGWVPLQTFTQHQGAVKA 281 (420)
T ss_dssp EEESSCCSSCSCCSEEECCCSSCEEE
T ss_pred EEeeccccccceeeeeecccCCceee
Confidence 88887654 23444455555544
No 64
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=1.7e-23 Score=191.44 Aligned_cols=187 Identities=13% Similarity=0.196 Sum_probs=147.0
Q ss_pred eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC
Q psy8430 135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214 (361)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~ 214 (361)
+..+..+..|... +.+....+..| ..+....|+|++.+|++|+.|+.|++||+.+++....+.+|...|.+++|+|+
T Consensus 74 ~~~d~~v~i~d~~--~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~ 150 (420)
T 3vl1_A 74 ARLDGHDFLFNTI--IRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPS 150 (420)
T ss_dssp EEETTEEEEEECC--SEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTT
T ss_pred EEcCCcEEEEEec--ccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCC
Confidence 3334445555543 33444455566 44555578999999999999999999999999988888899999999999999
Q ss_pred CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc
Q psy8430 215 KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV 294 (361)
Q Consensus 215 ~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 294 (361)
+++|++++.|+.|++||+.++ .....+.+|...|.+++|+|++++|++++.|+.
T Consensus 151 ~~~l~s~s~d~~i~iwd~~~~--------------------------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~ 204 (420)
T 3vl1_A 151 GEALISSSQDMQLKIWSVKDG--------------------------SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGT 204 (420)
T ss_dssp SSEEEEEETTSEEEEEETTTC--------------------------CCCEEEECCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred CCEEEEEeCCCeEEEEeCCCC--------------------------cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCc
Confidence 999999999999999999765 256778899999999999999999999999999
Q ss_pred EEEeeCCCCeEEEEeecCC---CCCeE-----------------------------EEEEcCCCcccCCCeEEEEcCCCC
Q psy8430 295 ANLFDVETGTILQSLTGHD---EEPHI-----------------------------LCVSSYYSKVSCDLFQRIQHLDCG 342 (361)
Q Consensus 295 v~iwd~~~~~~~~~~~~h~---~~v~~-----------------------------~~~s~s~~~v~~dg~i~iW~~d~~ 342 (361)
|++||+++++++..+..|. ..+.+ ++++++ .||.|++| |+
T Consensus 205 v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----~dg~i~i~--d~- 276 (420)
T 3vl1_A 205 IRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH-----VSGVITVH--NV- 276 (420)
T ss_dssp EEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE-----TTSCEEEE--ET-
T ss_pred EEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEc-----CCCeEEEE--EC-
Confidence 9999999999999887542 22222 566677 99999999 87
Q ss_pred CCCCcceeeeeecccccC
Q psy8430 343 TSENPIHSVCVFQDIQST 360 (361)
Q Consensus 343 ~~~~~~~~v~~~~~h~~~ 360 (361)
+..........+|...
T Consensus 277 --~~~~~~~~~~~~~~~~ 292 (420)
T 3vl1_A 277 --FSKEQTIQLPSKFTCS 292 (420)
T ss_dssp --TTCCEEEEECCTTSSC
T ss_pred --CCCceeEEcccccCCC
Confidence 3322233333456543
No 65
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.92 E-value=3.1e-23 Score=205.41 Aligned_cols=163 Identities=17% Similarity=0.249 Sum_probs=146.7
Q ss_pred eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231 (361)
Q Consensus 152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd 231 (361)
+..+.+.+|.+.|.+++|+|+|++|++|+.||+|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC-eEEEEee
Q psy8430 232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG-TILQSLT 310 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~-~~~~~~~ 310 (361)
+.++ .....+.+|...|.+++|+|+++++++++.||.|++||+.++ .....+.
T Consensus 84 ~~~~--------------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 137 (814)
T 3mkq_A 84 YNTG--------------------------EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE 137 (814)
T ss_dssp TTTC--------------------------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE
T ss_pred CCCC--------------------------cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc
Confidence 8765 356778899999999999999999999999999999999987 7778889
Q ss_pred cCCCCCeEEEEEc-C---CCcccCCCeEEEEcCCCC
Q psy8430 311 GHDEEPHILCVSS-Y---YSKVSCDLFQRIQHLDCG 342 (361)
Q Consensus 311 ~h~~~v~~~~~s~-s---~~~v~~dg~i~iW~~d~~ 342 (361)
+|...+.++.+++ + ....+.||.|++| |+.
T Consensus 138 ~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vw--d~~ 171 (814)
T 3mkq_A 138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVW--SLG 171 (814)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEETTSEEEEE--ETT
T ss_pred CCCCcEEEEEEEcCCCCEEEEEeCCCeEEEE--ECC
Confidence 9999998876665 2 2233589999999 763
No 66
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.92 E-value=6e-25 Score=198.26 Aligned_cols=160 Identities=14% Similarity=0.152 Sum_probs=130.0
Q ss_pred eeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--eEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccc
Q psy8430 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI 234 (361)
Q Consensus 157 l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~--~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~ 234 (361)
++.|.++|++++|+|++++|++|+.|++|++||+.++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 3457789999999999999999999999999999988 77888889999999999999999999999999999999976
Q ss_pred cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCe---EEEEeec
Q psy8430 235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT---ILQSLTG 311 (361)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~---~~~~~~~ 311 (361)
+. ...+...+.+|...|.+++|+|++++|++++.|+.|++||+++++ +...+..
T Consensus 87 ~~-----------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 143 (377)
T 3dwl_C 87 DG-----------------------TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR 143 (377)
T ss_dssp -------------------------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECS
T ss_pred CC-----------------------ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeec
Confidence 52 012456677899999999999999999999999999999999887 4778887
Q ss_pred -CCCCCeEEEEEcCCC---cccCCCeEEEEcCCC
Q psy8430 312 -HDEEPHILCVSSYYS---KVSCDLFQRIQHLDC 341 (361)
Q Consensus 312 -h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~ 341 (361)
|...|.++.+++... ..+.||.|++| |+
T Consensus 144 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw--d~ 175 (377)
T 3dwl_C 144 PLRSTILSLDWHPNNVLLAAGCADRKAYVL--SA 175 (377)
T ss_dssp SCCSCEEEEEECTTSSEEEEEESSSCEEEE--EE
T ss_pred ccCCCeEEEEEcCCCCEEEEEeCCCEEEEE--EE
Confidence 999999855544321 12399999999 65
No 67
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.92 E-value=5.9e-23 Score=189.14 Aligned_cols=186 Identities=24% Similarity=0.351 Sum_probs=157.1
Q ss_pred eeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec
Q psy8430 134 KVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213 (361)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~ 213 (361)
.+..+..+..|.. .+++.+..+.+|.+.|++++| ++.+|++|+.||+|++||+.+++.+..+.+|...|.+++|+
T Consensus 148 ~g~~dg~i~iwd~--~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~- 222 (435)
T 1p22_A 148 SGLRDNTIKIWDK--NTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN- 222 (435)
T ss_dssp EEESSSCEEEEES--SSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC-
T ss_pred EEeCCCeEEEEeC--CCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc-
Confidence 3344444555544 456788899999999999999 67899999999999999999999999999999999999996
Q ss_pred CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC
Q psy8430 214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR 293 (361)
Q Consensus 214 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 293 (361)
+..+++|+.||.|++||+.++... .....+.+|...|.+++| +++++++|+.||
T Consensus 223 -~~~l~s~s~dg~i~vwd~~~~~~~-----------------------~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg 276 (435)
T 1p22_A 223 -NGMMVTCSKDRSIAVWDMASPTDI-----------------------TLRRVLVGHRAAVNVVDF--DDKYIVSASGDR 276 (435)
T ss_dssp -TTEEEEEETTSCEEEEECSSSSCC-----------------------EEEEEECCCSSCEEEEEE--ETTEEEEEETTS
T ss_pred -CCEEEEeeCCCcEEEEeCCCCCCc-----------------------eeeeEecCCCCcEEEEEe--CCCEEEEEeCCC
Confidence 459999999999999999765221 123667889999999999 789999999999
Q ss_pred cEEEeeCCCCeEEEEeecCCCCCeE------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 294 VANLFDVETGTILQSLTGHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 294 ~v~iwd~~~~~~~~~~~~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
.|++||+++++++..+.+|...+.+ ++++++ .||.|++| |+ +. ..++..+.+|.+.|
T Consensus 277 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~-----~dg~i~iw--d~---~~-~~~~~~~~~h~~~v 339 (435)
T 1p22_A 277 TIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGS-----SDNTIRLW--DI---EC-GACLRVLEGHEELV 339 (435)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEE-----TTSCEEEE--ET---TT-CCEEEEECCCSSCE
T ss_pred eEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEe-----CCCeEEEE--EC---CC-CCEEEEEeCCcCcE
Confidence 9999999999999999999999988 455666 99999999 87 33 56788899998753
No 68
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.92 E-value=2.2e-23 Score=186.57 Aligned_cols=212 Identities=16% Similarity=0.193 Sum_probs=157.6
Q ss_pred eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEE---eCCCCCeEEEE
Q psy8430 135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQY---SGHSGSVNSVR 210 (361)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~---~~h~~~v~~v~ 210 (361)
+..+..+..|.. .+++.+..+.+|.+.|++++|+| ++.+|++|+.||+|++||+.+++.+..+ .+|...|.+++
T Consensus 91 ~~~dg~i~v~d~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 168 (366)
T 3k26_A 91 AGSRGIIRIINP--ITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSAD 168 (366)
T ss_dssp EETTCEEEEECT--TTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEE
T ss_pred ecCCCEEEEEEc--hhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEE
Confidence 334444555544 45677888999999999999999 9999999999999999999999999888 68999999999
Q ss_pred EecCCCEEEEEECCCcEEEEeccccccccCCCCC--CCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEE
Q psy8430 211 FLPNKDLVLSASGDKSVHIWQAVINWECLNNDND--SDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT 288 (361)
Q Consensus 211 ~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 288 (361)
|+|++..|++++.||.|++||++++......... ........................+|...|.+++|+ +.++++
T Consensus 169 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~ 246 (366)
T 3k26_A 169 YDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILS 246 (366)
T ss_dssp ECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEE
T ss_pred ECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEE
Confidence 9999999999999999999999876443211000 000000000000111112334455699999999998 789999
Q ss_pred EeCCCcEEEeeCCCCeE--------------EEEeecCCCCCeE----------EEEEcCCCcccCCCeEEEEcCCCCCC
Q psy8430 289 ASWDRVANLFDVETGTI--------------LQSLTGHDEEPHI----------LCVSSYYSKVSCDLFQRIQHLDCGTS 344 (361)
Q Consensus 289 ~~~d~~v~iwd~~~~~~--------------~~~~~~h~~~v~~----------~~~s~s~~~v~~dg~i~iW~~d~~~~ 344 (361)
++.|+.|++||++++.. +..+..|...+.+ ++++++ .||.|++| |+.++
T Consensus 247 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~-----~dg~i~vw--d~~~~ 319 (366)
T 3k26_A 247 KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGN-----QVGKLYVW--DLEVE 319 (366)
T ss_dssp ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEEC-----TTSCEEEE--ECCSS
T ss_pred EecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEe-----cCCcEEEE--ECCCC
Confidence 99999999999987744 7888888887765 455566 99999999 77554
Q ss_pred CCcceeeeeeccc
Q psy8430 345 ENPIHSVCVFQDI 357 (361)
Q Consensus 345 ~~~~~~v~~~~~h 357 (361)
+........+.+|
T Consensus 320 ~~~~~~~~~~~~~ 332 (366)
T 3k26_A 320 DPHKAKCTTLTHH 332 (366)
T ss_dssp SGGGCEEEEECCT
T ss_pred CCccccceEEccc
Confidence 4333356678887
No 69
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.92 E-value=2.1e-22 Score=183.51 Aligned_cols=177 Identities=18% Similarity=0.209 Sum_probs=148.6
Q ss_pred eccceeEEeeecCccceeeeEEeec-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec
Q psy8430 135 VQTSKIVSSFKTSLLSCYKIRSFSG-HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213 (361)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~l~~-h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~ 213 (361)
+..+..+..|... +++....+.. |.+.|++++|+|++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+
T Consensus 109 ~~~d~~v~lw~~~--~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~- 185 (401)
T 4aez_A 109 VALERNVYVWNAD--SGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN- 185 (401)
T ss_dssp EEETTEEEEEETT--TCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE-
T ss_pred EECCCeEEEeeCC--CCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC-
Confidence 3334445555554 3444555554 89999999999999999999999999999999999999999999999999994
Q ss_pred CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC
Q psy8430 214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR 293 (361)
Q Consensus 214 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 293 (361)
++.+++++.||.|++||++... .....+.+|...|.+++|+|++.++++|+.|+
T Consensus 186 -~~~l~~~~~dg~i~i~d~~~~~-------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 239 (401)
T 4aez_A 186 -RHVLSSGSRSGAIHHHDVRIAN-------------------------HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN 239 (401)
T ss_dssp -TTEEEEEETTSEEEEEETTSSS-------------------------CEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred -CCEEEEEcCCCCEEEEecccCc-------------------------ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence 6799999999999999987431 25677889999999999999999999999999
Q ss_pred cEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---ccc---CCCeEEEEcCCCC
Q psy8430 294 VANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVS---CDLFQRIQHLDCG 342 (361)
Q Consensus 294 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~---~dg~i~iW~~d~~ 342 (361)
.|++||+++++++..+..|...|.++.+++... ..+ .||.|++| |+.
T Consensus 240 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~--d~~ 292 (401)
T 4aez_A 240 VVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW--NAA 292 (401)
T ss_dssp CEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEE--ETT
T ss_pred eEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEE--ECC
Confidence 999999999999999999999999977766421 111 69999999 773
No 70
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.92 E-value=5.1e-23 Score=203.87 Aligned_cols=192 Identities=21% Similarity=0.258 Sum_probs=160.2
Q ss_pred ccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCC
Q psy8430 136 QTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215 (361)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~ 215 (361)
..+..+..|.. .++..+..+.+|.++|++++|+|++++|++|+.||.|++||+.+++.+..+.+|.+.|.+++|+|++
T Consensus 32 ~~~g~v~iwd~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~ 109 (814)
T 3mkq_A 32 LYSGRVEIWNY--ETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK 109 (814)
T ss_dssp ETTSEEEEEET--TTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred eCCCEEEEEEC--CCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCC
Confidence 33445555654 4567888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCc
Q psy8430 216 DLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRV 294 (361)
Q Consensus 216 ~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~ 294 (361)
+.|++++.||.|++||+.++. .....+.+|...|.+++|+| ++.++++++.||.
T Consensus 110 ~~l~~~~~dg~i~vw~~~~~~-------------------------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~ 164 (814)
T 3mkq_A 110 PYVLSGSDDLTVKLWNWENNW-------------------------ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (814)
T ss_dssp SEEEEEETTSEEEEEEGGGTS-------------------------EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred CEEEEEcCCCEEEEEECCCCc-------------------------eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCe
Confidence 999999999999999987542 25667789999999999999 8999999999999
Q ss_pred EEEeeCCCCeEEEEeecCC-CCCeEEEEEc--CCC---cccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430 295 ANLFDVETGTILQSLTGHD-EEPHILCVSS--YYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST 360 (361)
Q Consensus 295 v~iwd~~~~~~~~~~~~h~-~~v~~~~~s~--s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~ 360 (361)
|++||+.++.....+..+. ..+..+.+++ ... ..+.||.|++| |. +. ..++..+.+|...
T Consensus 165 v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~--d~---~~-~~~~~~~~~~~~~ 230 (814)
T 3mkq_A 165 VKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIW--DY---QT-KSCVATLEGHMSN 230 (814)
T ss_dssp EEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEE--ET---TT-TEEEEEEECCSSC
T ss_pred EEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEE--EC---CC-CcEEEEEcCCCCC
Confidence 9999999888888777654 6676654443 211 12389999999 77 33 4567888888764
No 71
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.4e-23 Score=193.61 Aligned_cols=173 Identities=11% Similarity=0.084 Sum_probs=133.6
Q ss_pred ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC-----CeEEEEEecCCCEEEEEECCCcEEEEecc
Q psy8430 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG-----SVNSVRFLPNKDLVLSASGDKSVHIWQAV 233 (361)
Q Consensus 159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~-----~v~~v~~~~~~~~l~s~~~d~~i~lwd~~ 233 (361)
+|...|++++|+|+|..||+++.||+|++||... .+..+. |.. .|.+++|+|+|++|++|+.||+|++||+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 5688999999999999999999999999999644 666666 665 49999999999999999999999999987
Q ss_pred ccccccCCCCCCCCCCCCCCCCCceecccccEEE----eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE---E
Q psy8430 234 INWECLNNDNDSDLDESKEPDESSITLRTPVKEL----LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI---L 306 (361)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~---~ 306 (361)
.+.... ...-.+..+ .+|.+.|.+++|+|+| +++++.|++|++||+..+.. .
T Consensus 160 ~~~l~~-------------------~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~ 218 (588)
T 2j04_A 160 KNSENT-------------------PEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVS 218 (588)
T ss_dssp CCTTTC-------------------CCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCE
T ss_pred CCcccc-------------------ccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccce
Confidence 652100 000023554 5678899999999999 88999999999999998773 3
Q ss_pred EEee-cCCCCCeEEEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 307 QSLT-GHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 307 ~~~~-~h~~~v~~~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
+++. +|...|.++.+++..+..+.|+.|++| |+ .. ........||.+.|
T Consensus 219 ~tL~~~h~~~V~svaFsg~~LASa~~~tIkLW--d~---~~-~~~~~~~~gh~~~V 268 (588)
T 2j04_A 219 RMIQNASRRKITDLKIVDYKVVLTCPGYVHKI--DL---KN-YSISSLKTGSLENF 268 (588)
T ss_dssp EEEECCCSSCCCCEEEETTEEEEECSSEEEEE--ET---TT-TEEEEEECSCCSCC
T ss_pred eeecccccCcEEEEEEECCEEEEEeCCeEEEE--EC---CC-CeEEEEEcCCCceE
Confidence 5674 788889887777444445568999999 76 33 23322222788754
No 72
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.91 E-value=9.1e-24 Score=207.48 Aligned_cols=182 Identities=17% Similarity=0.206 Sum_probs=149.1
Q ss_pred eEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC--CCeEEEEEeCCCCCeEEEEEecC--CCEEEEEECCCcEEE
Q psy8430 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ--TGKCVLQYSGHSGSVNSVRFLPN--KDLVLSASGDKSVHI 229 (361)
Q Consensus 154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~--~~~~~~~~~~h~~~v~~v~~~~~--~~~l~s~~~d~~i~l 229 (361)
+..+.+|.+.|++++|+|+|++|++|+.||+|++||+. +++.+..+.+|.+.|.+++|+|+ ++.|++|+.||.|++
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 35678999999999999999999999999999999998 45778889999999999999987 999999999999999
Q ss_pred EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC--CCEEEEEeCCCcEEEeeCCCC--eE
Q psy8430 230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD--GEQVITASWDRVANLFDVETG--TI 305 (361)
Q Consensus 230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~--~~ 305 (361)
||+.++.. .....+.+|...|.+++|+|+ +.++++|+.||.|++||++++ ..
T Consensus 82 wd~~~~~~------------------------~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~ 137 (753)
T 3jro_A 82 WKEENGRW------------------------SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS 137 (753)
T ss_dssp EEEETTEE------------------------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCC
T ss_pred EECCCCcc------------------------cccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcc
Confidence 99876521 256677889999999999999 999999999999999999987 34
Q ss_pred EEEeecCCCCCeEEEEEcC----------------CCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 306 LQSLTGHDEEPHILCVSSY----------------YSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 306 ~~~~~~h~~~v~~~~~s~s----------------~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
...+.+|...|.++.+++. ....+.||.|++| |++++.....++..+.+|.+.|
T Consensus 138 ~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iw--d~~~~~~~~~~~~~~~~h~~~V 207 (753)
T 3jro_A 138 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW--KYNSDAQTYVLESTLEGHSDWV 207 (753)
T ss_dssp CEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEE--EEETTTTEEEEEEEECCCSSCE
T ss_pred eeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEE--eccCCcccceeeeeecCCCCcE
Confidence 4566788888888766651 1123589999999 8865555457788889998754
No 73
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=5.1e-23 Score=183.52 Aligned_cols=182 Identities=8% Similarity=-0.016 Sum_probs=133.8
Q ss_pred eeeccceeEEeeecCc-------cceeeeEEee-ccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCeEEEEEe-C
Q psy8430 133 LKVQTSKIVSSFKTSL-------LSCYKIRSFS-GHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTGKCVLQYS-G 201 (361)
Q Consensus 133 ~~~~~~~~~~~~~~~~-------~~~~~~~~l~-~h~~~V~~l~~~~--~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-~ 201 (361)
+.+..+..+..|.... ...+.++.+. +|.+.|.+++|+| ++.+|++|+.|++|++||+.+++...... .
T Consensus 89 ~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~ 168 (343)
T 3lrv_A 89 ISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAK 168 (343)
T ss_dssp EEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCC
T ss_pred EEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecC
Confidence 3344445555554332 2334344444 7889999999999 99999999999999999999998877664 3
Q ss_pred CCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC-CCCcEEEEEEc
Q psy8430 202 HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWL 280 (361)
Q Consensus 202 h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~ 280 (361)
|...|.+++|+|++.+|++|+.||.|++||++++.. ....+.+ |..+|.+++|+
T Consensus 169 ~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~-------------------------~~~~~~~~h~~~v~~l~fs 223 (343)
T 3lrv_A 169 SDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ-------------------------ASSRFPVDEEAKIKEVKFA 223 (343)
T ss_dssp SSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTS-------------------------CCEECCCCTTSCEEEEEEC
T ss_pred CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCC-------------------------CccEEeccCCCCEEEEEEe
Confidence 556899999999999999999999999999987632 1245666 99999999999
Q ss_pred CCCCEEEEEeCCCcEEEeeCCCCeEEEEeec---CCCCCe--EEEEEcCCCc--c-cC-CCeEEEEcCCCC
Q psy8430 281 SDGEQVITASWDRVANLFDVETGTILQSLTG---HDEEPH--ILCVSSYYSK--V-SC-DLFQRIQHLDCG 342 (361)
Q Consensus 281 ~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~---h~~~v~--~~~~s~s~~~--v-~~-dg~i~iW~~d~~ 342 (361)
|+|.+|++++ |+.|++||+++++++.++.. |...+. ++.+++++.+ + +. |+.|+|| ++.
T Consensus 224 ~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~--~~~ 291 (343)
T 3lrv_A 224 DNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIY--KFD 291 (343)
T ss_dssp TTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEE--EEC
T ss_pred CCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEE--EEc
Confidence 9999999999 55999999999877665543 333333 2344433221 1 15 9999999 553
No 74
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=4.6e-24 Score=200.07 Aligned_cols=158 Identities=10% Similarity=-0.033 Sum_probs=133.2
Q ss_pred eEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-eEEEEEeCCCCCeEEE--EEecCC-CEEEEEECCCcEEE
Q psy8430 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSV--RFLPNK-DLVLSASGDKSVHI 229 (361)
Q Consensus 154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~-~~~~~~~~h~~~v~~v--~~~~~~-~~l~s~~~d~~i~l 229 (361)
..++.+|.+.|++++|++++ .|++|+.||+|++||+.++ .+...+.+|...|.+| +|+|++ .+|+||+.|++|+|
T Consensus 259 ~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvkl 337 (524)
T 2j04_B 259 SLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYI 337 (524)
T ss_dssp SEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEE
T ss_pred eEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEE
Confidence 45788999999999999865 8999999999999999876 4456688999999999 567887 89999999999999
Q ss_pred EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCC--cEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEE
Q psy8430 230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN--VVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 307 (361)
Q Consensus 230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 307 (361)
||++++. +...+.+|.. .|.+++|+|++..+++++.|++|++||++++.++.
T Consensus 338 WD~~~~~--------------------------~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~ 391 (524)
T 2j04_B 338 FNPKDIA--------------------------TTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVH 391 (524)
T ss_dssp ECGGGHH--------------------------HHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCE
T ss_pred EECCCCC--------------------------cccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccce
Confidence 9998653 3344555543 57899999999999999999999999999999989
Q ss_pred EeecCCCCCeEEEEEcCCC---cccCCCeEEEEc
Q psy8430 308 SLTGHDEEPHILCVSSYYS---KVSCDLFQRIQH 338 (361)
Q Consensus 308 ~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~ 338 (361)
++.+|.+.|.++.+++.+. +.+.||+|+|||
T Consensus 392 ~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd 425 (524)
T 2j04_B 392 PLVSRETTITAIGVSRLHPMVLAGSADGSLIITN 425 (524)
T ss_dssp EEEECSSCEEEEECCSSCCBCEEEETTTEEECCB
T ss_pred eeecCCCceEEEEeCCCCCeEEEEECCCEEEEEe
Confidence 9999999999966655422 224899999993
No 75
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.91 E-value=3.5e-22 Score=175.45 Aligned_cols=141 Identities=21% Similarity=0.294 Sum_probs=119.9
Q ss_pred cceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC
Q psy8430 137 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216 (361)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~ 216 (361)
.+..+..|...+........+.+|...|++++|+|++++|++|+.||+|++||+.+++.+..+.+|...+.++.+ ++.
T Consensus 43 ~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~ 120 (318)
T 4ggc_A 43 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSY 120 (318)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETT
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCC
Confidence 455667776654444444445578899999999999999999999999999999999999999999998887655 567
Q ss_pred EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy8430 217 LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVAN 296 (361)
Q Consensus 217 ~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~ 296 (361)
.+++++.++.+++|+..... .....+.+|...+..+.++++++++++++.|+.|+
T Consensus 121 ~l~s~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 175 (318)
T 4ggc_A 121 ILSSGSRSGHIHHHDVRVAE-------------------------HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVN 175 (318)
T ss_dssp EEEEEETTSEEEEEETTSSS-------------------------CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEEEecCCceEeeecCCCc-------------------------eeEEEEcCccCceEEEEEcCCCCEEEEEecCccee
Confidence 99999999999999976542 25677889999999999999999999999999999
Q ss_pred EeeCCCCe
Q psy8430 297 LFDVETGT 304 (361)
Q Consensus 297 iwd~~~~~ 304 (361)
+||+++++
T Consensus 176 iwd~~~~~ 183 (318)
T 4ggc_A 176 VWPSAPGE 183 (318)
T ss_dssp EEESSCBT
T ss_pred EEECCCCc
Confidence 99998764
No 76
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.91 E-value=5.6e-23 Score=201.87 Aligned_cols=187 Identities=25% Similarity=0.308 Sum_probs=158.9
Q ss_pred eeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCCCeE
Q psy8430 132 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPG--QPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVN 207 (361)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~--~~~l~s~s~d~~i~~wd~~~~~--~~~~~~~h~~~v~ 207 (361)
...+..+..+..|.....+++.+..+.+|.++|++++|+|+ +++|++|+.||+|++||+.+++ .+..+.+|...|.
T Consensus 24 latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~ 103 (753)
T 3jro_A 24 LATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVN 103 (753)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE
T ss_pred EEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeE
Confidence 34455567777888776788899999999999999999988 9999999999999999999886 7778889999999
Q ss_pred EEEEecC--CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC----
Q psy8430 208 SVRFLPN--KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS---- 281 (361)
Q Consensus 208 ~v~~~~~--~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---- 281 (361)
+++|+|+ +..+++|+.||.|++||++.+.. .....+.+|...|.+++|+|
T Consensus 104 ~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~------------------------~~~~~~~~~~~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 104 SVQWAPHEYGPLLLVASSDGKVSVVEFKENGT------------------------TSPIIIDAHAIGVNSASWAPATIE 159 (753)
T ss_dssp EEEECCGGGCSEEEEEETTSEEEEEECCSSSC------------------------CCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEECCCCCCCEEEEEeCCCcEEEEEeecCCC------------------------cceeEeecCCCceEEEEecCcccc
Confidence 9999999 99999999999999999976522 13456678999999999999
Q ss_pred ---------CCCEEEEEeCCCcEEEeeCCCC----eEEEEeecCCCCCeEEEEEcC---CC---cccCCCeEEEEcCCCC
Q psy8430 282 ---------DGEQVITASWDRVANLFDVETG----TILQSLTGHDEEPHILCVSSY---YS---KVSCDLFQRIQHLDCG 342 (361)
Q Consensus 282 ---------~~~~l~s~~~d~~v~iwd~~~~----~~~~~~~~h~~~v~~~~~s~s---~~---~v~~dg~i~iW~~d~~ 342 (361)
++.++++|+.||.|++||++++ .+...+.+|...|.++.+++. +. ..+.||.|++| |+.
T Consensus 160 ~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iw--d~~ 237 (753)
T 3jro_A 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW--TQD 237 (753)
T ss_dssp -------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEE--EES
T ss_pred cccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEe--cCC
Confidence 5899999999999999999877 667788899999988776654 11 23589999999 764
Q ss_pred CC
Q psy8430 343 TS 344 (361)
Q Consensus 343 ~~ 344 (361)
++
T Consensus 238 ~~ 239 (753)
T 3jro_A 238 NE 239 (753)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 77
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.91 E-value=4.4e-22 Score=176.08 Aligned_cols=179 Identities=12% Similarity=0.153 Sum_probs=148.6
Q ss_pred eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC
Q psy8430 135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214 (361)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~ 214 (361)
+..+..+..|............+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|+
T Consensus 115 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~ 194 (337)
T 1gxr_A 115 GGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISND 194 (337)
T ss_dssp EESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred EcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCC
Confidence 34445566676666666678889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc
Q psy8430 215 KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV 294 (361)
Q Consensus 215 ~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 294 (361)
++.+++++.||.|++||++++. ....+ .+...+.+++|+|+++++++++.|+.
T Consensus 195 ~~~l~~~~~dg~i~~~d~~~~~--------------------------~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~ 247 (337)
T 1gxr_A 195 GTKLWTGGLDNTVRSWDLREGR--------------------------QLQQH-DFTSQIFSLGYCPTGEWLAVGMESSN 247 (337)
T ss_dssp SSEEEEEETTSEEEEEETTTTE--------------------------EEEEE-ECSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCEEEEEecCCcEEEEECCCCc--------------------------eEeee-cCCCceEEEEECCCCCEEEEEcCCCc
Confidence 9999999999999999997652 22233 47788999999999999999999999
Q ss_pred EEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCC
Q psy8430 295 ANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGT 343 (361)
Q Consensus 295 v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~ 343 (361)
|++||+++++.. .+..|...+.++.+++... ..+.||.|++| |+.+
T Consensus 248 i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~--~~~~ 296 (337)
T 1gxr_A 248 VEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAW--RTPY 296 (337)
T ss_dssp EEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEE--ETTT
T ss_pred EEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEE--ECCC
Confidence 999999988754 5677888888855554321 12389999999 6633
No 78
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.91 E-value=6.7e-23 Score=184.08 Aligned_cols=196 Identities=14% Similarity=0.076 Sum_probs=151.6
Q ss_pred ceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE---EEEE-eCCCCCeEEEEEec
Q psy8430 138 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC---VLQY-SGHSGSVNSVRFLP 213 (361)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~---~~~~-~~h~~~v~~v~~~~ 213 (361)
+..+..|............+.+|...|.+++|+|++.+|++|+.|+.|++||+..+.. ...+ .+|...|.+++|+|
T Consensus 73 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 152 (372)
T 1k8k_C 73 DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP 152 (372)
T ss_dssp TSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT
T ss_pred CCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC
Confidence 3445555554444445556678999999999999999999999999999999987752 3333 57899999999999
Q ss_pred CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC
Q psy8430 214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR 293 (361)
Q Consensus 214 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 293 (361)
++++|++++.||.|++||++......... ............+...+.+|...|.+++|+|++.+|++++.|+
T Consensus 153 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 224 (372)
T 1k8k_C 153 NSVLLAAGSCDFKCRIFSAYIKEVEERPA--------PTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS 224 (372)
T ss_dssp TSSEEEEEETTSCEEEEECCCTTTSCCCC--------CBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT
T ss_pred CCCEEEEEcCCCCEEEEEccccccccccc--------ccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCC
Confidence 99999999999999999986432110000 0000000122346677778999999999999999999999999
Q ss_pred cEEEeeCCCCeEEEEeecCCCCCeEEEEEcC--CCcccCCCeEEEEcCCCCC
Q psy8430 294 VANLFDVETGTILQSLTGHDEEPHILCVSSY--YSKVSCDLFQRIQHLDCGT 343 (361)
Q Consensus 294 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s--~~~v~~dg~i~iW~~d~~~ 343 (361)
.|++||+++++++..+..|...+.++.++.. ++..+.||.|++| |+.+
T Consensus 225 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~--~~~~ 274 (372)
T 1k8k_C 225 TVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLF--TYDS 274 (372)
T ss_dssp EEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEE--EEET
T ss_pred EEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEE--EccC
Confidence 9999999999999999999999999777765 3344689999999 6633
No 79
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.91 E-value=3.2e-22 Score=182.63 Aligned_cols=182 Identities=21% Similarity=0.316 Sum_probs=144.0
Q ss_pred cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe----------------------------
Q psy8430 149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS---------------------------- 200 (361)
Q Consensus 149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~---------------------------- 200 (361)
.++..+..+.+|.+.|.+++|+|++.+|++++.|+.|++||+.+++.+..+.
T Consensus 137 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (425)
T 1r5m_A 137 KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD 216 (425)
T ss_dssp TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEE
T ss_pred CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcC
Confidence 4567888899999999999999999999999999999999998876655443
Q ss_pred ----------------------------CCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCC
Q psy8430 201 ----------------------------GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKE 252 (361)
Q Consensus 201 ----------------------------~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 252 (361)
+|...|.+++|+|++++|++++.|+.|++||+.++
T Consensus 217 ~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~----------------- 279 (425)
T 1r5m_A 217 DDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG----------------- 279 (425)
T ss_dssp TTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB-----------------
T ss_pred CCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC-----------------
Confidence 45666777777777777777777777777776543
Q ss_pred CCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---ccc
Q psy8430 253 PDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVS 329 (361)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~ 329 (361)
.+...+.+|...|.+++|+|++ ++++++.|+.|++||+++++++..+..|...+.++.+++... ..+
T Consensus 280 ---------~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 280 ---------NSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAF 349 (425)
T ss_dssp ---------SCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEE
T ss_pred ---------ccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEE
Confidence 3567777899999999999999 999999999999999999999999999999998855544321 123
Q ss_pred CCCeEEEEcCCCCCCCC----------------cceeeeeeccccc
Q psy8430 330 CDLFQRIQHLDCGTSEN----------------PIHSVCVFQDIQS 359 (361)
Q Consensus 330 ~dg~i~iW~~d~~~~~~----------------~~~~v~~~~~h~~ 359 (361)
.||.|++| |+.++.. +..++..+.+|..
T Consensus 350 ~dg~i~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (425)
T 1r5m_A 350 MDGQVNVY--DLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQD 393 (425)
T ss_dssp TTSCEEEE--ECHHHHC--------------CEECCEEEEECCTTC
T ss_pred CCCeEEEE--ECCCCccceeeeecccccccCcccchhhhhhcCccc
Confidence 89999999 7633220 0127888888854
No 80
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.91 E-value=1.5e-22 Score=187.84 Aligned_cols=169 Identities=19% Similarity=0.328 Sum_probs=144.6
Q ss_pred eeEEeeccCCCe-EEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430 153 KIRSFSGHRDGV-WDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231 (361)
Q Consensus 153 ~~~~l~~h~~~V-~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd 231 (361)
....+.+|.+.| .++.+ ++++|++|+.||+|++||+.+++.+..+.+|.+.|.+++|+|++ .+++|+.||+|++||
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd 189 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWD 189 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEE
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEE
Confidence 345788999885 56666 46799999999999999999999999999999999999999987 999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEc--CCCCEEEEEeCCCcEEEeeCCCCe-----
Q psy8430 232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWL--SDGEQVITASWDRVANLFDVETGT----- 304 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~s~~~d~~v~iwd~~~~~----- 304 (361)
+.++ .+...+.+|...|.+++|+ +++.++++|+.|+.|++||++++.
T Consensus 190 ~~~~--------------------------~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~ 243 (464)
T 3v7d_B 190 IKKG--------------------------CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDH 243 (464)
T ss_dssp TTTT--------------------------EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC---
T ss_pred CCCC--------------------------cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccc
Confidence 9765 2567788999999999998 578999999999999999998765
Q ss_pred ------------------EEEEeecCCCCCeE------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430 305 ------------------ILQSLTGHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST 360 (361)
Q Consensus 305 ------------------~~~~~~~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~ 360 (361)
.+..+.+|...+.+ ++++++ .||.|++| |+ +. ..++..+.+|...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-----~d~~i~vw--d~---~~-~~~~~~~~~~~~~ 312 (464)
T 3v7d_B 244 GEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS-----YDNTLIVW--DV---AQ-MKCLYILSGHTDR 312 (464)
T ss_dssp ---CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEE-----TTSCEEEE--ET---TT-TEEEEEECCCSSC
T ss_pred cccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEe-----CCCeEEEE--EC---CC-CcEEEEecCCCCC
Confidence 35567788888877 567777 99999999 87 44 5678889999865
Q ss_pred C
Q psy8430 361 G 361 (361)
Q Consensus 361 ~ 361 (361)
|
T Consensus 313 v 313 (464)
T 3v7d_B 313 I 313 (464)
T ss_dssp E
T ss_pred E
Confidence 3
No 81
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.91 E-value=2.3e-22 Score=185.61 Aligned_cols=148 Identities=27% Similarity=0.579 Sum_probs=110.8
Q ss_pred cceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC
Q psy8430 137 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216 (361)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~ 216 (361)
.+..+..|.. .+++.+..+.+|.+.|++++|+ +++|++|+.||+|++||+.+++.+..+.+|...|.++.|+ +.
T Consensus 137 ~dg~i~vwd~--~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~ 210 (445)
T 2ovr_B 137 DDNTLKVWSA--VTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EK 210 (445)
T ss_dssp TTSCEEEEET--TTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TT
T ss_pred CCCcEEEEEC--CCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CC
Confidence 3334444444 4567888999999999999998 5699999999999999999999999999999999999995 56
Q ss_pred EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy8430 217 LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVAN 296 (361)
Q Consensus 217 ~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~ 296 (361)
.+++|+.||.|++||+.++. +...+.+|...|.+++| ++.++++|+.||.|+
T Consensus 211 ~l~s~s~dg~i~~wd~~~~~--------------------------~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~ 262 (445)
T 2ovr_B 211 RVVSGSRDATLRVWDIETGQ--------------------------CLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVK 262 (445)
T ss_dssp EEEEEETTSEEEEEESSSCC--------------------------EEEEEECCSSCEEEEEE--CSSCEEEEETTSCEE
T ss_pred EEEEEeCCCEEEEEECCCCc--------------------------EEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEE
Confidence 89999999999999998663 33444555555555555 455555555555555
Q ss_pred EeeCCCCeEEEEeecCCCCCeE
Q psy8430 297 LFDVETGTILQSLTGHDEEPHI 318 (361)
Q Consensus 297 iwd~~~~~~~~~~~~h~~~v~~ 318 (361)
+||+++++++..+.+|...+.+
T Consensus 263 iwd~~~~~~~~~~~~~~~~v~~ 284 (445)
T 2ovr_B 263 VWDPETETCLHTLQGHTNRVYS 284 (445)
T ss_dssp EEEGGGTEEEEEECCCSSCEEE
T ss_pred EEECCCCcEeEEecCCCCceEE
Confidence 5555555555555555555555
No 82
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.91 E-value=8.4e-23 Score=177.35 Aligned_cols=161 Identities=11% Similarity=0.018 Sum_probs=122.0
Q ss_pred CeEEEEEcCC----CCEEEEEeC--------------------CCcEEEEeC-CCCeEEEEEeCCCCCeEEEEEec---C
Q psy8430 163 GVWDVAVRPG----QPVLGSASA--------------------DRTVRLWST-QTGKCVLQYSGHSGSVNSVRFLP---N 214 (361)
Q Consensus 163 ~V~~l~~~~~----~~~l~s~s~--------------------d~~i~~wd~-~~~~~~~~~~~h~~~v~~v~~~~---~ 214 (361)
.|..++++|+ +..+++++. |+.|++|++ .+|+.+..+.+|...+..++|+| +
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~ 192 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGM 192 (356)
T ss_dssp EEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETS
T ss_pred ceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCC
Confidence 4566666777 777777653 889999999 45788888888999999999999 7
Q ss_pred CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCC---CcEEEEEEcCCCCEE-----
Q psy8430 215 KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHS---NVVIAADWLSDGEQV----- 286 (361)
Q Consensus 215 ~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l----- 286 (361)
+..|++++.|++|+|||+.+++ ++..+.+|. ..+.+++|+|+|.++
T Consensus 193 ~~~LaSgS~D~TIkIWDl~TGk--------------------------~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~ 246 (356)
T 2w18_A 193 QEALLGTTIMNNIVIWNLKTGQ--------------------------LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSH 246 (356)
T ss_dssp TTEEEEEETTSEEEEEETTTCC--------------------------EEEEEECCC---CCCEEEEEEETTEEEEEEC-
T ss_pred CceEEEecCCCcEEEEECCCCc--------------------------EEEEEcCCCcceeeeEEEEECCCCCEEEEecc
Confidence 7999999999999999998773 566676654 367778999999887
Q ss_pred -------EEEeCCCcEEEeeCCCCeEEEEe-----ecCCCCCeE------EEEEcCCCcccCCCeEEEEcCCCCCCCCcc
Q psy8430 287 -------ITASWDRVANLFDVETGTILQSL-----TGHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGTSENPI 348 (361)
Q Consensus 287 -------~s~~~d~~v~iwd~~~~~~~~~~-----~~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~ 348 (361)
++|+.|++|++||..+++++..+ .+|.....+ ++++++ .||+|+|| |+ +. .
T Consensus 247 ~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS-----~DgTIkIW--Dl---~t-G 315 (356)
T 2w18_A 247 PCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAIL-----TSGTIAIW--DL---LL-G 315 (356)
T ss_dssp -----------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEE-----TTSCEEEE--ET---TT-C
T ss_pred CCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEc-----CCCcEEEE--EC---CC-C
Confidence 56888999999999999988776 356554332 578888 99999999 87 33 5
Q ss_pred eeeeeecccccC
Q psy8430 349 HSVCVFQDIQST 360 (361)
Q Consensus 349 ~~v~~~~~h~~~ 360 (361)
+++.+|.||...
T Consensus 316 k~l~tL~gH~~~ 327 (356)
T 2w18_A 316 QCTALLPPVSDQ 327 (356)
T ss_dssp SEEEEECCC--C
T ss_pred cEEEEecCCCCC
Confidence 678899999764
No 83
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.2e-21 Score=175.44 Aligned_cols=189 Identities=20% Similarity=0.340 Sum_probs=154.1
Q ss_pred eccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC
Q psy8430 135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214 (361)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~ 214 (361)
+..+..+..|.. .+++.+..+.+|.+.|++++|+|++++|++++.|++|++||+.+++.+..+. +...|.+++|+|+
T Consensus 50 ~~~dg~i~vwd~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~ 126 (369)
T 3zwl_B 50 CSKDSSASVWYS--LNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPC 126 (369)
T ss_dssp EESSSCEEEEET--TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTT
T ss_pred EeCCCEEEEEeC--CCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccC
Confidence 333444555543 4567888999999999999999999999999999999999999999998888 8999999999999
Q ss_pred CCEEEEEECC-----CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCC--cEEEEEEcCCCCEEE
Q psy8430 215 KDLVLSASGD-----KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN--VVIAADWLSDGEQVI 287 (361)
Q Consensus 215 ~~~l~s~~~d-----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~ 287 (361)
+..+++++.+ +.|.+||+......... ......+...+..|.. .+.+++|+|++++++
T Consensus 127 ~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (369)
T 3zwl_B 127 GNYFLAILDNVMKNPGSINIYEIERDSATHEL---------------TKVSEEPIHKIITHEGLDAATVAGWSTKGKYII 191 (369)
T ss_dssp SSEEEEEECCBTTBCCEEEEEEEEECTTTCCE---------------EEECSSCSEEEECCTTCCCEEEEEECGGGCEEE
T ss_pred CCEEEEecCCccCCCCEEEEEEecCCccceee---------------cccccceeeeccCCcCccceeEEEEcCCCCEEE
Confidence 9999999999 99999999765332110 1111235566777777 999999999999999
Q ss_pred EEeCCCcEEEeeCCC-CeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCC
Q psy8430 288 TASWDRVANLFDVET-GTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGT 343 (361)
Q Consensus 288 s~~~d~~v~iwd~~~-~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~ 343 (361)
+++.||.|++||+++ +..+..+..|...+.++.+++... ..+.||.|++| |+.+
T Consensus 192 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~--d~~~ 249 (369)
T 3zwl_B 192 AGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLV--DVST 249 (369)
T ss_dssp EEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE--ETTT
T ss_pred EEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEE--ECCC
Confidence 999999999999998 788999999999999855554422 12389999999 7733
No 84
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.91 E-value=3.4e-23 Score=190.48 Aligned_cols=183 Identities=17% Similarity=0.208 Sum_probs=149.7
Q ss_pred EEeeccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCC----------CeEEEEEeCCCCCeEEEEEecCCC-EEEEEE
Q psy8430 155 RSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQT----------GKCVLQYSGHSGSVNSVRFLPNKD-LVLSAS 222 (361)
Q Consensus 155 ~~l~~h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~----------~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~ 222 (361)
....+|.+.|++++|+|+ +.+|++|+.||.|++||+.. ...+..+.+|...|.+++|+|++. +|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 456689999999999997 67999999999999999976 577888899999999999999988 999999
Q ss_pred CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCC
Q psy8430 223 GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVE 301 (361)
Q Consensus 223 ~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~ 301 (361)
.||.|++||+..+... .....+...+.+|...|.+++|+| ++.++++++.||.|++||++
T Consensus 202 ~dg~i~vwd~~~~~~~-------------------~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~ 262 (430)
T 2xyi_A 202 DDHTICLWDINATPKE-------------------HRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTR 262 (430)
T ss_dssp TTSCEEEEETTSCCBG-------------------GGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred CCCeEEEEeCCCCCCC-------------------CceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 9999999999763210 111123567778999999999999 78899999999999999999
Q ss_pred CC---eEEEEeecCCCCCeEEEEEcCCC----cccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 302 TG---TILQSLTGHDEEPHILCVSSYYS----KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 302 ~~---~~~~~~~~h~~~v~~~~~s~s~~----~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
++ .++..+..|...|.++.+++... ..+.||.|++| |+ +....++..+.+|.+.|
T Consensus 263 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vw--d~---~~~~~~~~~~~~h~~~v 324 (430)
T 2xyi_A 263 NNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALW--DL---RNLKLKLHSFESHKDEI 324 (430)
T ss_dssp CSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEE--ET---TCTTSCSEEEECCSSCE
T ss_pred CCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEE--eC---CCCCCCeEEeecCCCCE
Confidence 87 57788889999998855554311 12389999999 88 54445678888887653
No 85
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.91 E-value=6.6e-23 Score=188.93 Aligned_cols=202 Identities=15% Similarity=0.183 Sum_probs=149.7
Q ss_pred eeccceeEEeeecCccc---------eeeeEEeeccC------------CCeEEEEEcCCC--CEEEEEeCCCcEEEEeC
Q psy8430 134 KVQTSKIVSSFKTSLLS---------CYKIRSFSGHR------------DGVWDVAVRPGQ--PVLGSASADRTVRLWST 190 (361)
Q Consensus 134 ~~~~~~~~~~~~~~~~~---------~~~~~~l~~h~------------~~V~~l~~~~~~--~~l~s~s~d~~i~~wd~ 190 (361)
.+..+..+.+|...... .+++..+.+|. +.|++++|+|++ ..|++|+.|++|++||+
T Consensus 45 ~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~ 124 (447)
T 3dw8_B 45 TGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKI 124 (447)
T ss_dssp EEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEE
T ss_pred EEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEec
Confidence 34455566666654322 34688899998 899999999998 79999999999999998
Q ss_pred CCCeEE---------------------------------------EE-EeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430 191 QTGKCV---------------------------------------LQ-YSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230 (361)
Q Consensus 191 ~~~~~~---------------------------------------~~-~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw 230 (361)
.++... .. ..+|...|.+++|+|++++|++| .|+.|++|
T Consensus 125 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iw 203 (447)
T 3dw8_B 125 SERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLW 203 (447)
T ss_dssp EEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEE
T ss_pred ccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEE
Confidence 764432 12 35799999999999999999998 89999999
Q ss_pred eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEeeCCCCeE----
Q psy8430 231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG-EQVITASWDRVANLFDVETGTI---- 305 (361)
Q Consensus 231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~---- 305 (361)
|+........ ........+.+|...|.+++|+|++ .+|++|+.||.|++||+++++.
T Consensus 204 d~~~~~~~~~------------------~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 265 (447)
T 3dw8_B 204 HLEITDRSFN------------------IVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRH 265 (447)
T ss_dssp ETTEEEEEEE------------------EEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTT
T ss_pred ECCCCCceee------------------eeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccce
Confidence 9974321100 0000001345789999999999998 9999999999999999999887
Q ss_pred EEEeecCCC------------CCeEEEEEcCCC--cccCCCeEEEEcCCCCCCCCcceeeeeeccccc
Q psy8430 306 LQSLTGHDE------------EPHILCVSSYYS--KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS 359 (361)
Q Consensus 306 ~~~~~~h~~------------~v~~~~~s~s~~--~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~ 359 (361)
+..+.+|.. .|.++.+++.+. ..+.+|.|+|| |+ +....++..+.+|..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iw--d~---~~~~~~~~~~~~~~~ 328 (447)
T 3dw8_B 266 SKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVW--DL---NMENRPVETYQVHEY 328 (447)
T ss_dssp CEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEE--ET---TCCSSCSCCEESCGG
T ss_pred eeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEE--eC---CCCccccceeecccc
Confidence 788888876 788755555422 22233999999 88 433456777888863
No 86
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.91 E-value=6.4e-23 Score=183.06 Aligned_cols=195 Identities=11% Similarity=0.111 Sum_probs=149.7
Q ss_pred cceeEEeeecCccceeeeEEeeccCCCeEEEE------EcCCCCEEEEEeCCCcEEEEeCCCCe-EEEEEeCCCC----C
Q psy8430 137 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVA------VRPGQPVLGSASADRTVRLWSTQTGK-CVLQYSGHSG----S 205 (361)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~------~~~~~~~l~s~s~d~~i~~wd~~~~~-~~~~~~~h~~----~ 205 (361)
.+..+..|...... ..+..+.+|.+.|.+++ |+|++++|++|+.|++|++||+.++. .+..+..|.+ .
T Consensus 88 ~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 166 (357)
T 3i2n_A 88 FGGNLHIWNLEAPE-MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRD 166 (357)
T ss_dssp TTSCEEEECTTSCS-SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCC
T ss_pred CCCeEEEEeCCCCC-ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCc
Confidence 33444444443222 26788899999999995 47899999999999999999999886 6777766655 8
Q ss_pred eEEEE----EecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC
Q psy8430 206 VNSVR----FLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS 281 (361)
Q Consensus 206 v~~v~----~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 281 (361)
|.+++ |+|++.++++++.||.|++||++++ .......|...|.+++|+|
T Consensus 167 v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~---------------------------~~~~~~~~~~~v~~~~~~~ 219 (357)
T 3i2n_A 167 CWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNM---------------------------ALRWETNIKNGVCSLEFDR 219 (357)
T ss_dssp EEEEEEECCCC-CCCEEEEEETTSEEEEEETTTT---------------------------EEEEEEECSSCEEEEEESC
T ss_pred eEEEEEEeccCCCCCEEEEEccCCeEEEEECccC---------------------------ceeeecCCCCceEEEEcCC
Confidence 99998 6789999999999999999999765 2234467889999999999
Q ss_pred ---CCCEEEEEeCCCcEEEeeCCCCeEEEEee-----cCCCCCeEEEEEcCCC----cccCCCeEEEEcCCCCCCCCc--
Q psy8430 282 ---DGEQVITASWDRVANLFDVETGTILQSLT-----GHDEEPHILCVSSYYS----KVSCDLFQRIQHLDCGTSENP-- 347 (361)
Q Consensus 282 ---~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-----~h~~~v~~~~~s~s~~----~v~~dg~i~iW~~d~~~~~~~-- 347 (361)
++.++++++.||.|++||+++++++..+. +|...|.++.+++... ..+.||.|++| |+.++...
T Consensus 220 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw--d~~~~~~~~~ 297 (357)
T 3i2n_A 220 KDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLW--KYEYPIQRSK 297 (357)
T ss_dssp SSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEE--EEECCSCC--
T ss_pred CCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEe--ecCCCccccc
Confidence 99999999999999999999877665554 8999988854444311 12399999999 66433321
Q ss_pred -------------ceeeeeecccccCC
Q psy8430 348 -------------IHSVCVFQDIQSTG 361 (361)
Q Consensus 348 -------------~~~v~~~~~h~~~~ 361 (361)
..++..+.+|.+.|
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~v 324 (357)
T 3i2n_A 298 KDSEGIEMGVAGSVSLLQNVTLSTQPI 324 (357)
T ss_dssp CCTTSCCCCCCCEEEEEEEEECCSSCE
T ss_pred ccCCCCccccccccceeeccccCCCCe
Confidence 25788888887653
No 87
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.91 E-value=3.4e-22 Score=175.03 Aligned_cols=174 Identities=24% Similarity=0.309 Sum_probs=144.7
Q ss_pred ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEE
Q psy8430 150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229 (361)
Q Consensus 150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~l 229 (361)
..++.+++.+|.+.|++++| |++.+|++|+.||.|++||+.++.....+..|...|.+++|+|++..+++++.||.+++
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING 85 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred cHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence 34678889999999999999 99999999999999999999999989999999999999999999999999999999999
Q ss_pred EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEe
Q psy8430 230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 309 (361)
Q Consensus 230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 309 (361)
|++.... ...+...+.+|...|.+++| ++.++++++.|+.|++|| .++.+..+
T Consensus 86 ~~~~~~~-----------------------~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~ 138 (313)
T 3odt_A 86 VPLFATS-----------------------GEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNL 138 (313)
T ss_dssp EETTCCT-----------------------TSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEE
T ss_pred EEeeecC-----------------------CCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEec
Confidence 9986431 12356677899999999999 678999999999999999 77888999
Q ss_pred ecCCCCCeEEEEEc-C---CCcccCCCeEEEEcCCCCCCCCcceeeeeecc-ccc
Q psy8430 310 TGHDEEPHILCVSS-Y---YSKVSCDLFQRIQHLDCGTSENPIHSVCVFQD-IQS 359 (361)
Q Consensus 310 ~~h~~~v~~~~~s~-s---~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~-h~~ 359 (361)
..|...+.++.+.. . ....+.||.|++| |. ...+..+.+ |..
T Consensus 139 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~--d~------~~~~~~~~~~~~~ 185 (313)
T 3odt_A 139 QAHNASVWDAKVVSFSENKFLTASADKTIKLW--QN------DKVIKTFSGIHND 185 (313)
T ss_dssp ECCSSCEEEEEEEETTTTEEEEEETTSCEEEE--ET------TEEEEEECSSCSS
T ss_pred ccCCCceeEEEEccCCCCEEEEEECCCCEEEE--ec------CceEEEEeccCcc
Confidence 99999988744433 1 1122389999999 75 234555555 443
No 88
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.90 E-value=7.6e-23 Score=185.56 Aligned_cols=198 Identities=12% Similarity=0.060 Sum_probs=155.9
Q ss_pred eeeeeccceeEEeeecCccc----eeeeEEeeccCCCeEEEEEcCC----C---CEEEEEeCCCcEEEEeCCCCeE----
Q psy8430 131 NKLKVQTSKIVSSFKTSLLS----CYKIRSFSGHRDGVWDVAVRPG----Q---PVLGSASADRTVRLWSTQTGKC---- 195 (361)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~h~~~V~~l~~~~~----~---~~l~s~s~d~~i~~wd~~~~~~---- 195 (361)
..+.+..+..+..|...... ...+..+.+|...|++++|+|+ + .+|++++.|+.|++||+.+++.
T Consensus 28 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~ 107 (397)
T 1sq9_A 28 FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKV 107 (397)
T ss_dssp EEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCE
T ss_pred eEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccc
Confidence 34445556667777765544 4478888899999999999999 9 9999999999999999988876
Q ss_pred -EEEEeCC-----CCCeEEEEEe----cCCCE-EEEEECCCcEEEEeccc------cccccCCCCCCCCCCCCCCCCCce
Q psy8430 196 -VLQYSGH-----SGSVNSVRFL----PNKDL-VLSASGDKSVHIWQAVI------NWECLNNDNDSDLDESKEPDESSI 258 (361)
Q Consensus 196 -~~~~~~h-----~~~v~~v~~~----~~~~~-l~s~~~d~~i~lwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 258 (361)
...+..| ...|.+++|+ |++.. |++++.||.|++||+.+ +....
T Consensus 108 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------------------- 168 (397)
T 1sq9_A 108 IFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN------------------- 168 (397)
T ss_dssp EEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC-------------------
T ss_pred cceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceee-------------------
Confidence 8888888 5999999999 99999 99999999999999986 32211
Q ss_pred ecccccEEE-------eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec---C---CCCCeEEEEEcCC
Q psy8430 259 TLRTPVKEL-------LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG---H---DEEPHILCVSSYY 325 (361)
Q Consensus 259 ~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~---h---~~~v~~~~~s~s~ 325 (361)
..+...+ ..|...+.+++|+|++ ++++++.|+.|++||+++++++..+.. | ...+.++.+++..
T Consensus 169 --~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~ 245 (397)
T 1sq9_A 169 --WSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG 245 (397)
T ss_dssp --CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST
T ss_pred --ccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCC
Confidence 1122244 4488899999999999 999999999999999999999999998 8 8888885555442
Q ss_pred C---cccCC---CeEEEEcCCCCCCCCcceeeeeecc
Q psy8430 326 S---KVSCD---LFQRIQHLDCGTSENPIHSVCVFQD 356 (361)
Q Consensus 326 ~---~v~~d---g~i~iW~~d~~~~~~~~~~v~~~~~ 356 (361)
. ..+.| |.|++| |+ +. ..++..+.+
T Consensus 246 ~~l~~~~~d~~~g~i~i~--d~---~~-~~~~~~~~~ 276 (397)
T 1sq9_A 246 SLLAIAHDSNSFGCITLY--ET---EF-GERIGSLSV 276 (397)
T ss_dssp TEEEEEEEETTEEEEEEE--ET---TT-CCEEEEECB
T ss_pred CEEEEEecCCCCceEEEE--EC---CC-Ccccceecc
Confidence 2 12378 999999 77 33 456777877
No 89
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.5e-22 Score=186.37 Aligned_cols=162 Identities=11% Similarity=0.140 Sum_probs=134.3
Q ss_pred cCCCeEEEE--EcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC--CCCCeEEEEEecCCCEEEEEECCCcEEEEecccc
Q psy8430 160 HRDGVWDVA--VRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG--HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN 235 (361)
Q Consensus 160 h~~~V~~l~--~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~--h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~ 235 (361)
+...+.++. +++++.+|++|+.|++|++||+.+++.+..+.+ |.+.|.+++|+|++.+|++|+.||.|++||++++
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 246 (437)
T 3gre_A 167 KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN 246 (437)
T ss_dssp SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc
Confidence 456677777 668899999999999999999999999999998 8999999999999999999999999999999765
Q ss_pred ccccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEEcC----CCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430 236 WECLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLS----DGEQVITASWDRVANLFDVETGTILQSLT 310 (361)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~----~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 310 (361)
.++..+. .|...|.+++|+| ++.++++|+.||.|++||+++++++..+.
T Consensus 247 --------------------------~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 247 --------------------------VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFI 300 (437)
T ss_dssp --------------------------EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEE
T ss_pred --------------------------cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEE
Confidence 2455554 7888999996664 67899999999999999999999999998
Q ss_pred cCCCCCe---------------------------------EEEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeeccc
Q psy8430 311 GHDEEPH---------------------------------ILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDI 357 (361)
Q Consensus 311 ~h~~~v~---------------------------------~~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h 357 (361)
+|...+. .++++++ .||.|++| |+. . ..++..+.+|
T Consensus 301 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~-----~d~~i~~w--d~~---~-~~~~~~~~~~ 369 (437)
T 3gre_A 301 NSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDE-----ATSSIVMF--SLN---E-LSSSKAVISP 369 (437)
T ss_dssp SSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEG-----GGTEEEEE--ETT---C-GGGCEEEECC
T ss_pred cCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecC-----CCCeEEEE--ECC---C-cccceEEecc
Confidence 7653332 2567777 99999999 773 3 3445566665
Q ss_pred c
Q psy8430 358 Q 358 (361)
Q Consensus 358 ~ 358 (361)
.
T Consensus 370 ~ 370 (437)
T 3gre_A 370 S 370 (437)
T ss_dssp -
T ss_pred c
Confidence 3
No 90
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.90 E-value=5.3e-22 Score=180.77 Aligned_cols=167 Identities=17% Similarity=0.301 Sum_probs=135.6
Q ss_pred eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC-EEEEEE--CCCcE
Q psy8430 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSAS--GDKSV 227 (361)
Q Consensus 151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~--~d~~i 227 (361)
...+..+.+|.+.|.+++|+|++.+|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++. ++++++ .|+.|
T Consensus 207 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i 286 (401)
T 4aez_A 207 NHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQI 286 (401)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEE
T ss_pred cceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEE
Confidence 456788899999999999999999999999999999999999999999999999999999999764 566655 69999
Q ss_pred EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe--CCCcEEEeeCCCCeE
Q psy8430 228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS--WDRVANLFDVETGTI 305 (361)
Q Consensus 228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~v~iwd~~~~~~ 305 (361)
++||+.++. +...+. +...+.+++|+|+++++++++ .||.|++||+.++..
T Consensus 287 ~i~d~~~~~--------------------------~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~ 339 (401)
T 4aez_A 287 HFWNAATGA--------------------------RVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGL 339 (401)
T ss_dssp EEEETTTCC--------------------------EEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEE
T ss_pred EEEECCCCC--------------------------EEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccc
Confidence 999997652 344443 667899999999999999954 899999999998765
Q ss_pred EE--EeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCC
Q psy8430 306 LQ--SLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSEN 346 (361)
Q Consensus 306 ~~--~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~ 346 (361)
.. .+.+|...|.++.+++++. ..+.||.|++| |+.+++.
T Consensus 340 ~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw--~~~~~~~ 383 (401)
T 4aez_A 340 TKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFW--RVYDGDH 383 (401)
T ss_dssp EEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEE--ECCC---
T ss_pred eeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEE--ECCCCcc
Confidence 54 4678999998844443321 12399999999 7755443
No 91
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.90 E-value=2e-21 Score=171.83 Aligned_cols=189 Identities=13% Similarity=0.180 Sum_probs=149.8
Q ss_pred ceeEEeeecCccc-eeeeEEee--ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe--EEEEEeCCCCCeEEEEEe
Q psy8430 138 SKIVSSFKTSLLS-CYKIRSFS--GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFL 212 (361)
Q Consensus 138 ~~~~~~~~~~~~~-~~~~~~l~--~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~--~~~~~~~h~~~v~~v~~~ 212 (361)
+..+..|...... ...+..+. +|...|.+++|+|++++|++++.|+.|++||+.+++ ....+..|...|.+++|+
T Consensus 71 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~ 150 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAIS 150 (337)
T ss_dssp BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEEC
T ss_pred CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEEC
Confidence 4555666654432 23344444 799999999999999999999999999999999886 667788899999999999
Q ss_pred cCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy8430 213 PNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD 292 (361)
Q Consensus 213 ~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 292 (361)
|+++.+++++.||.|++||++++ .....+.+|...+.+++|+|+++++++++.|
T Consensus 151 ~~~~~l~~~~~dg~v~~~d~~~~--------------------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 204 (337)
T 1gxr_A 151 PDSKVCFSCCSDGNIAVWDLHNQ--------------------------TLVRQFQGHTDGASCIDISNDGTKLWTGGLD 204 (337)
T ss_dssp TTSSEEEEEETTSCEEEEETTTT--------------------------EEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCEEEEEeCCCcEEEEeCCCC--------------------------ceeeeeecccCceEEEEECCCCCEEEEEecC
Confidence 99999999999999999998765 2566778899999999999999999999999
Q ss_pred CcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeecccccC
Q psy8430 293 RVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST 360 (361)
Q Consensus 293 ~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~ 360 (361)
+.|++||+++++.+..+. +...+.++.+++... ..+.||.|++| |+.+.. ...+.+|...
T Consensus 205 g~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~--~~~~~~-----~~~~~~~~~~ 267 (337)
T 1gxr_A 205 NTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVL--HVNKPD-----KYQLHLHESC 267 (337)
T ss_dssp SEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEE--ETTSSC-----EEEECCCSSC
T ss_pred CcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEE--ECCCCC-----eEEEcCCccc
Confidence 999999999999888775 666777755444321 11389999999 763221 2355666553
No 92
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.90 E-value=3.1e-22 Score=207.05 Aligned_cols=164 Identities=21% Similarity=0.293 Sum_probs=145.8
Q ss_pred eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231 (361)
Q Consensus 152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd 231 (361)
.....+.+|.+.|++++|+|+|.+|++|+.||+|++||+.+++.+..+.+|...|.+++|+|+++++++++.||.|++||
T Consensus 606 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 606 LSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWD 685 (1249)
T ss_dssp CCSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 34456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC--CCCEEEEEeCCCcEEEeeCCCCeEEEEe
Q psy8430 232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS--DGEQVITASWDRVANLFDVETGTILQSL 309 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 309 (361)
+.++ ..+..+.+|...|.+++|+| ++.++++|+.|+.|++||+++++++.++
T Consensus 686 ~~~~--------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~ 739 (1249)
T 3sfz_A 686 SATG--------------------------KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTM 739 (1249)
T ss_dssp TTTC--------------------------CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEE
T ss_pred CCCC--------------------------ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhee
Confidence 8765 36778889999999999999 5668999999999999999999999999
Q ss_pred ecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCC
Q psy8430 310 TGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGT 343 (361)
Q Consensus 310 ~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~ 343 (361)
.+|...|.++.++++.. ..+.||.|++| |+.+
T Consensus 740 ~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vw--d~~~ 774 (1249)
T 3sfz_A 740 FGHTNSVNHCRFSPDDELLASCSADGTLRLW--DVRS 774 (1249)
T ss_dssp CCCSSCEEEEEECSSTTEEEEEESSSEEEEE--EGGG
T ss_pred cCCCCCEEEEEEecCCCEEEEEECCCeEEEE--eCCC
Confidence 99999999855544421 22399999999 7733
No 93
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.90 E-value=6.9e-23 Score=186.96 Aligned_cols=193 Identities=18% Similarity=0.186 Sum_probs=154.7
Q ss_pred cceeEEeeecCc--cceeeeEEeeccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCe------EEEE---EeCCCC
Q psy8430 137 TSKIVSSFKTSL--LSCYKIRSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGK------CVLQ---YSGHSG 204 (361)
Q Consensus 137 ~~~~~~~~~~~~--~~~~~~~~l~~h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~------~~~~---~~~h~~ 204 (361)
.+..+..|.... .....+..+.+|.+.|++++|+|+ +.+|++|+.|++|++||+.+++ .... +.+|..
T Consensus 87 ~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 166 (416)
T 2pm9_A 87 DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVD 166 (416)
T ss_dssp SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSC
T ss_pred cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCC
Confidence 344455555544 123578889999999999999998 8899999999999999998876 3322 357999
Q ss_pred CeEEEEEecC-CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCC------CCcEEEE
Q psy8430 205 SVNSVRFLPN-KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGH------SNVVIAA 277 (361)
Q Consensus 205 ~v~~v~~~~~-~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~ 277 (361)
.|.+++|+|+ +.+|++++.||.|++||++++. +...+..+ ...+.++
T Consensus 167 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~--------------------------~~~~~~~~~~~~~~~~~v~~~ 220 (416)
T 2pm9_A 167 EVISLAWNQSLAHVFASAGSSNFASIWDLKAKK--------------------------EVIHLSYTSPNSGIKQQLSVV 220 (416)
T ss_dssp CCCEEEECSSCTTEEEEESSSSCEEEEETTTTE--------------------------EEEEECCCCCSSCCCCCEEEE
T ss_pred CeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC--------------------------cceEEeccccccccCCceEEE
Confidence 9999999998 7899999999999999998653 34444444 7899999
Q ss_pred EEcCCC-CEEEEEeCCC---cEEEeeCCCC-eEEEEee-cCCCCCeEEEEEc-CCC---cccCCCeEEEEcCCCCCCCCc
Q psy8430 278 DWLSDG-EQVITASWDR---VANLFDVETG-TILQSLT-GHDEEPHILCVSS-YYS---KVSCDLFQRIQHLDCGTSENP 347 (361)
Q Consensus 278 ~~~~~~-~~l~s~~~d~---~v~iwd~~~~-~~~~~~~-~h~~~v~~~~~s~-s~~---~v~~dg~i~iW~~d~~~~~~~ 347 (361)
+|+|++ .++++++.|+ .|++||++++ .++..+. +|...|.++.+++ ... ..+.||.|++| |+ +.
T Consensus 221 ~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~w--d~---~~- 294 (416)
T 2pm9_A 221 EWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLW--NP---ES- 294 (416)
T ss_dssp EECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEE--CS---SS-
T ss_pred EECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEe--eC---CC-
Confidence 999997 6899999998 9999999986 6778888 8999999877765 311 23589999999 77 33
Q ss_pred ceeeeeecccccCC
Q psy8430 348 IHSVCVFQDIQSTG 361 (361)
Q Consensus 348 ~~~v~~~~~h~~~~ 361 (361)
..++..+.+|...|
T Consensus 295 ~~~~~~~~~~~~~v 308 (416)
T 2pm9_A 295 AEQLSQFPARGNWC 308 (416)
T ss_dssp CCEEEEEECSSSCC
T ss_pred CccceeecCCCCce
Confidence 46688888888754
No 94
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.90 E-value=7.6e-23 Score=188.52 Aligned_cols=198 Identities=16% Similarity=0.179 Sum_probs=139.5
Q ss_pred ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-----------EEEEEeCCC------------CCeEEEEEecCC
Q psy8430 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-----------CVLQYSGHS------------GSVNSVRFLPNK 215 (361)
Q Consensus 159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~-----------~~~~~~~h~------------~~v~~v~~~~~~ 215 (361)
.|.+.|++++|+|+|.+|++|+.||.|++||+.++. ....+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 478999999999999999999999999999998776 578889998 889999999998
Q ss_pred --CEEEEEECCCcEEEEeccccccccCCCCCCCCCC----CCCCCCCc---------eecccccEEE-eCCCCcEEEEEE
Q psy8430 216 --DLVLSASGDKSVHIWQAVINWECLNNDNDSDLDE----SKEPDESS---------ITLRTPVKEL-LGHSNVVIAADW 279 (361)
Q Consensus 216 --~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~----~~~~~~~~---------~~~~~~~~~~-~~~~~~v~~~~~ 279 (361)
..|++++.|++|++||+..+.............. ........ .....+...+ .+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 7999999999999999987543211100000000 00000000 0001122233 579999999999
Q ss_pred cCCCCEEEEEeCCCcEEEeeCCC-CeEEE-------EeecCCCCCeEEEEEcCC-C---cccCCCeEEEEcCCCCCCCCc
Q psy8430 280 LSDGEQVITASWDRVANLFDVET-GTILQ-------SLTGHDEEPHILCVSSYY-S---KVSCDLFQRIQHLDCGTSENP 347 (361)
Q Consensus 280 ~~~~~~l~s~~~d~~v~iwd~~~-~~~~~-------~~~~h~~~v~~~~~s~s~-~---~v~~dg~i~iW~~d~~~~~~~ 347 (361)
+|++++|++| .|+.|++||+++ +.++. .+.+|...|.++.+++.. . ..+.||.|++| |+++++..
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iw--d~~~~~~~ 262 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLC--DMRASALC 262 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEE--ETTTCSSS
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEE--ECcCCccc
Confidence 9999999999 799999999994 44554 356788888886665542 1 22489999999 87444432
Q ss_pred ceeeeeeccccc
Q psy8430 348 IHSVCVFQDIQS 359 (361)
Q Consensus 348 ~~~v~~~~~h~~ 359 (361)
...+..+.+|..
T Consensus 263 ~~~~~~~~~~~~ 274 (447)
T 3dw8_B 263 DRHSKLFEEPED 274 (447)
T ss_dssp CTTCEEECCC--
T ss_pred cceeeEeccCCC
Confidence 233677777764
No 95
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.90 E-value=4.2e-22 Score=206.05 Aligned_cols=181 Identities=24% Similarity=0.320 Sum_probs=150.9
Q ss_pred cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec--CCCEEEEEECCCc
Q psy8430 149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP--NKDLVLSASGDKS 226 (361)
Q Consensus 149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~--~~~~l~s~~~d~~ 226 (361)
.+++.+.++.+|.+.|++++|+|+|.+|++|+.|++|++||+.+++.+..+.+|...|.+++|+| ++.++++++.|+.
T Consensus 645 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~ 724 (1249)
T 3sfz_A 645 ETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFF 724 (1249)
T ss_dssp TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSC
T ss_pred CCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCe
Confidence 55678889999999999999999999999999999999999999999999999999999999999 5568999999999
Q ss_pred EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430 227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL 306 (361)
Q Consensus 227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 306 (361)
|++||+.++ .+...+.+|...|.+++|+|+++++++++.||.|++||++++...
T Consensus 725 v~vwd~~~~--------------------------~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~ 778 (1249)
T 3sfz_A 725 LKLWDLNQK--------------------------ECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANER 778 (1249)
T ss_dssp EEEEETTSS--------------------------SEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEE
T ss_pred EEEEECCCc--------------------------chhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCccc
Confidence 999999765 256778899999999999999999999999999999999887665
Q ss_pred EEee-------------------------------------------------------cCCCCCeEEEEEcCCC---cc
Q psy8430 307 QSLT-------------------------------------------------------GHDEEPHILCVSSYYS---KV 328 (361)
Q Consensus 307 ~~~~-------------------------------------------------------~h~~~v~~~~~s~s~~---~v 328 (361)
..+. +|...+.++.+++... ..
T Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 858 (1249)
T 3sfz_A 779 KSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIA 858 (1249)
T ss_dssp EEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEE
T ss_pred ceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEE
Confidence 5442 4555555533332211 11
Q ss_pred cCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 329 SCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 329 ~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
+.||.|++| |+ .. ..++..+.+|.+.|
T Consensus 859 ~~dg~v~vw--d~---~~-~~~~~~~~~h~~~v 885 (1249)
T 3sfz_A 859 LSQYCVELW--NI---DS-RLKVADCRGHLSWV 885 (1249)
T ss_dssp CSSSCEEEE--ET---TT-TEEEEEECCCSSCE
T ss_pred eCCCeEEEE--Ec---CC-CceeeecCCCccce
Confidence 389999999 76 33 56678888988653
No 96
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.9e-23 Score=208.48 Aligned_cols=200 Identities=10% Similarity=-0.026 Sum_probs=144.3
Q ss_pred EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEE----EEE--e-----CCCCCeEEEEEecCCCEEEEEEC
Q psy8430 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV----LQY--S-----GHSGSVNSVRFLPNKDLVLSASG 223 (361)
Q Consensus 155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~----~~~--~-----~h~~~v~~v~~~~~~~~l~s~~~ 223 (361)
..+.||...+.+++|+|++++|++|+.|++|++||+.++... ... . +|...|.+|+|+|++++||+|+.
T Consensus 429 ~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~ 508 (902)
T 2oaj_A 429 YLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIE 508 (902)
T ss_dssp CSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEET
T ss_pred CcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEec
Confidence 457789888999999999999999999999999999877321 111 1 78999999999999999999999
Q ss_pred CCcEEEEeccccccccC----CCCCCCCCC-----CCCC----------CCCceecccccEEEeCCCCcEEEEEEcCCCC
Q psy8430 224 DKSVHIWQAVINWECLN----NDNDSDLDE-----SKEP----------DESSITLRTPVKELLGHSNVVIAADWLSDGE 284 (361)
Q Consensus 224 d~~i~lwd~~~~~~~~~----~~~~~~~~~-----~~~~----------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 284 (361)
||+|+|||+.++..... ......... .... .........++..+.+|.+.|++++|+|+|
T Consensus 509 DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG- 587 (902)
T 2oaj_A 509 TGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG- 587 (902)
T ss_dssp TSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-
T ss_pred CcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-
Confidence 99999999987632100 000000000 0000 000001123567888999999999999999
Q ss_pred EEEEEeCCCcEEEeeCCCCeEEE-----Eee-cCCCCCeEEEEE-----cCC-----C-cccCCCeEEEEcCCCCCCCCc
Q psy8430 285 QVITASWDRVANLFDVETGTILQ-----SLT-GHDEEPHILCVS-----SYY-----S-KVSCDLFQRIQHLDCGTSENP 347 (361)
Q Consensus 285 ~l~s~~~d~~v~iwd~~~~~~~~-----~~~-~h~~~v~~~~~s-----~s~-----~-~v~~dg~i~iW~~d~~~~~~~ 347 (361)
+|++|+.|++|++||++++..+. .+. +|...|.++.|+ +++ + ..+.||+|++|+++. ...
T Consensus 588 ~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p---~~~ 664 (902)
T 2oaj_A 588 FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILP---ASG 664 (902)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEE---CGG
T ss_pred EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEec---CCC
Confidence 99999999999999999887664 233 788889988888 442 1 235899999994422 222
Q ss_pred ceeeeeecccc
Q psy8430 348 IHSVCVFQDIQ 358 (361)
Q Consensus 348 ~~~v~~~~~h~ 358 (361)
+.++..|.||+
T Consensus 665 g~~~~~~~~~~ 675 (902)
T 2oaj_A 665 GKFDVQLMDIT 675 (902)
T ss_dssp GCEEEEEEEEE
T ss_pred CcEEEEecCce
Confidence 45677888886
No 97
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.90 E-value=7.5e-22 Score=176.64 Aligned_cols=222 Identities=12% Similarity=0.093 Sum_probs=152.0
Q ss_pred eeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEE-
Q psy8430 133 LKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF- 211 (361)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~- 211 (361)
+.+..+..+..|............+.+|.+.|++++|+|++.+|++|+.||+|++||+.+++.+. +.+|...|.+++|
T Consensus 58 ~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~ 136 (368)
T 3mmy_A 58 IAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWI 136 (368)
T ss_dssp EEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEE
T ss_pred EEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEE
Confidence 33444555666766554455558889999999999999999999999999999999999998776 4569999999999
Q ss_pred -ecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCC-----------CCceeccc---ccEEE-eCCCCcEE
Q psy8430 212 -LPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPD-----------ESSITLRT---PVKEL-LGHSNVVI 275 (361)
Q Consensus 212 -~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~---~~~~~-~~~~~~v~ 275 (361)
+|++.+|++++.||.|++||++++................... ...+.... ..... ..+...+.
T Consensus 137 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 216 (368)
T 3mmy_A 137 KAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHR 216 (368)
T ss_dssp ECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEE
T ss_pred eCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCc
Confidence 8899999999999999999998775433221111000000000 00000000 00001 11233455
Q ss_pred EEEEcCCCCE----EEEEeCCCcEEEeeCCCC---eEEEEeecCCC------------CCeEEEEEcCCC---cccCCCe
Q psy8430 276 AADWLSDGEQ----VITASWDRVANLFDVETG---TILQSLTGHDE------------EPHILCVSSYYS---KVSCDLF 333 (361)
Q Consensus 276 ~~~~~~~~~~----l~s~~~d~~v~iwd~~~~---~~~~~~~~h~~------------~v~~~~~s~s~~---~v~~dg~ 333 (361)
.+++.+++.. +++++.||.|++||++.. ..+..+.+|.. .|.++.+++... ..+.||.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~ 296 (368)
T 3mmy_A 217 CVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR 296 (368)
T ss_dssp EEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSC
T ss_pred eEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCe
Confidence 5555555544 999999999999999987 56777887775 577755544421 1238999
Q ss_pred EEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 334 QRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 334 i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
|+|| |+ +. ..++..+.+|...|
T Consensus 297 i~iw--d~---~~-~~~~~~~~~~~~~v 318 (368)
T 3mmy_A 297 FSFW--DK---DA-RTKLKTSEQLDQPI 318 (368)
T ss_dssp EEEE--ET---TT-TEEEEECCCCSSCE
T ss_pred EEEE--EC---CC-CcEEEEecCCCCCc
Confidence 9999 77 43 56788888887653
No 98
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.90 E-value=2.7e-21 Score=171.46 Aligned_cols=192 Identities=21% Similarity=0.287 Sum_probs=155.5
Q ss_pred eccceeEEeeecCc---cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEE
Q psy8430 135 VQTSKIVSSFKTSL---LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 211 (361)
Q Consensus 135 ~~~~~~~~~~~~~~---~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~ 211 (361)
+..+..+..|.... ....+.+.+.+|.+.|.+++|+|+|.+|++|+.|+.|++|+...+........+...+..+.+
T Consensus 57 ~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (340)
T 4aow_A 57 ASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF 136 (340)
T ss_dssp EETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred EcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEE
Confidence 34445555565433 334677889999999999999999999999999999999999999888888889999999999
Q ss_pred ecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCC--CEEEEE
Q psy8430 212 LPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDG--EQVITA 289 (361)
Q Consensus 212 ~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~s~ 289 (361)
++++..|++++.|+.+++||+..... ......+|...+..++|++++ .+++++
T Consensus 137 ~~~~~~l~s~s~d~~~~~~d~~~~~~-------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~s~ 191 (340)
T 4aow_A 137 SSDNRQIVSGSRDKTIKLWNTLGVCK-------------------------YTVQDESHSEWVSCVRFSPNSSNPIIVSC 191 (340)
T ss_dssp CTTSSCEEEEETTSCEEEECTTSCEE-------------------------EEECSSSCSSCEEEEEECSCSSSCEEEEE
T ss_pred eecCccceeecCCCeEEEEEeCCCce-------------------------EEEEeccccCcccceEEccCCCCcEEEEE
Confidence 99999999999999999999864421 233446789999999998864 578999
Q ss_pred eCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeeccc
Q psy8430 290 SWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQDI 357 (361)
Q Consensus 290 ~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h 357 (361)
+.|+.|++||+++++++..+.+|...|.++.+++... ..+.||.|++| |+ +. ..++..+.+|
T Consensus 192 ~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iw--d~---~~-~~~~~~~~~~ 256 (340)
T 4aow_A 192 GWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLW--DL---NE-GKHLYTLDGG 256 (340)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEE--ET---TT-TEEEEEEECS
T ss_pred cCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEE--Ee---cc-CceeeeecCC
Confidence 9999999999999999999999999999855444311 12399999999 77 33 4455666554
No 99
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1e-21 Score=171.96 Aligned_cols=172 Identities=22% Similarity=0.330 Sum_probs=146.7
Q ss_pred ccceeEEeeecCccceeeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeC-CCCCeEEEEEec
Q psy8430 136 QTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSG-HSGSVNSVRFLP 213 (361)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~-h~~~v~~v~~~~ 213 (361)
..+..+..|. ....+..+.+|.+.|.+++|.| ++.++++++.|+.|++|| .++....+.. |...|.+++|+|
T Consensus 121 ~~d~~i~~~d----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~ 194 (313)
T 3odt_A 121 SWDKTAKVWK----EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVD 194 (313)
T ss_dssp ETTSEEEEEE----TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEE
T ss_pred eCCCCEEEEc----CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcC
Confidence 3344445554 5577888899999999999988 899999999999999999 5667777777 999999999999
Q ss_pred CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC
Q psy8430 214 NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR 293 (361)
Q Consensus 214 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 293 (361)
++. +++++.||.|++||++++ .++..+.+|...|.+++|+|++ .+++++.||
T Consensus 195 ~~~-~~~~~~dg~i~i~d~~~~--------------------------~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg 246 (313)
T 3odt_A 195 DGH-FISCSNDGLIKLVDMHTG--------------------------DVLRTYEGHESFVYCIKLLPNG-DIVSCGEDR 246 (313)
T ss_dssp TTE-EEEEETTSEEEEEETTTC--------------------------CEEEEEECCSSCEEEEEECTTS-CEEEEETTS
T ss_pred CCe-EEEccCCCeEEEEECCch--------------------------hhhhhhhcCCceEEEEEEecCC-CEEEEecCC
Confidence 988 999999999999998765 3667788999999999999999 689999999
Q ss_pred cEEEeeCCCCeEEEEeecCCCCCeEEEEEcCC--CcccCCCeEEEEcCCCCC
Q psy8430 294 VANLFDVETGTILQSLTGHDEEPHILCVSSYY--SKVSCDLFQRIQHLDCGT 343 (361)
Q Consensus 294 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~--~~v~~dg~i~iW~~d~~~ 343 (361)
.|++||+++++++..+..|...+.++.++... +..+.||.|++| |+.+
T Consensus 247 ~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw--~~~~ 296 (313)
T 3odt_A 247 TVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIF--SQEK 296 (313)
T ss_dssp EEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEE--ESCG
T ss_pred EEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEE--eCCC
Confidence 99999999999999999999999886666552 233589999999 6633
No 100
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.90 E-value=6e-22 Score=182.37 Aligned_cols=174 Identities=22% Similarity=0.370 Sum_probs=149.3
Q ss_pred cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEE---EEEeCCCCCeEEEEEecCCCEEEEEECCC
Q psy8430 149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV---LQYSGHSGSVNSVRFLPNKDLVLSASGDK 225 (361)
Q Consensus 149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~---~~~~~h~~~v~~v~~~~~~~~l~s~~~d~ 225 (361)
.+++.+.++.+|.+.|.+++|++ ..+++|+.||+|++||+.++... ..+.+|...|.+++| +++.+++|+.||
T Consensus 201 ~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg 276 (435)
T 1p22_A 201 NTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDR 276 (435)
T ss_dssp SSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTS
T ss_pred CCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCC
Confidence 45678899999999999999974 49999999999999999887544 677899999999999 688999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430 226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI 305 (361)
Q Consensus 226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 305 (361)
.|++||++++ .++..+.+|...|.+++| ++.++++|+.||.|++||++++++
T Consensus 277 ~i~vwd~~~~--------------------------~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~ 328 (435)
T 1p22_A 277 TIKVWNTSTC--------------------------EFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGAC 328 (435)
T ss_dssp EEEEEETTTC--------------------------CEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCE
T ss_pred eEEEEECCcC--------------------------cEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCE
Confidence 9999998765 356778899999999999 578999999999999999999999
Q ss_pred EEEeecCCCCCeE------EEEEcCCCcccCCCeEEEEcCCCCCCCCc-----ceeeeeecccccCC
Q psy8430 306 LQSLTGHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGTSENP-----IHSVCVFQDIQSTG 361 (361)
Q Consensus 306 ~~~~~~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~-----~~~v~~~~~h~~~~ 361 (361)
+.++.+|...|.+ ++++++ .||.|++| |+.++..+ ..++..+.+|.+.|
T Consensus 329 ~~~~~~h~~~v~~~~~~~~~l~sg~-----~dg~i~vw--d~~~~~~~~~~~~~~~~~~~~~h~~~v 388 (435)
T 1p22_A 329 LRVLEGHEELVRCIRFDNKRIVSGA-----YDGKIKVW--DLVAALDPRAPAGTLCLRTLVEHSGRV 388 (435)
T ss_dssp EEEECCCSSCEEEEECCSSEEEEEE-----TTSCEEEE--EHHHHTSTTSCTTTTEEEEECCCSSCC
T ss_pred EEEEeCCcCcEEEEEecCCEEEEEe-----CCCcEEEE--ECCCCCCccccccchheeeccCCCCCe
Confidence 9999999999988 566666 99999999 76433321 12788899998765
No 101
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.90 E-value=8.2e-22 Score=182.31 Aligned_cols=194 Identities=12% Similarity=0.071 Sum_probs=151.7
Q ss_pred eeccceeEEeeecCccceeeeEEee--ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE----EEeCCCCCeE
Q psy8430 134 KVQTSKIVSSFKTSLLSCYKIRSFS--GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL----QYSGHSGSVN 207 (361)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~l~--~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~----~~~~h~~~v~ 207 (361)
.+..+..+..|......+..+..+. .|...|++++|+|++.+|++|+.||.|++|++.++.... .+.+|...|.
T Consensus 120 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~ 199 (450)
T 2vdu_B 120 CADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLT 199 (450)
T ss_dssp EEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEE
T ss_pred EECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceE
Confidence 3445566677776533556666666 677999999999999999999999999999998876443 6778999999
Q ss_pred EEEEecC---CCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEE-EeCCCCcEEEEEEcCCC
Q psy8430 208 SVRFLPN---KDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKE-LLGHSNVVIAADWLSDG 283 (361)
Q Consensus 208 ~v~~~~~---~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~ 283 (361)
+++|+|+ +++|++++.|+.|++||+.++. .+.. +.+|...|.+++|+ ++
T Consensus 200 ~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~--------------------------~~~~~~~~h~~~v~~~~~s-d~ 252 (450)
T 2vdu_B 200 DVHLIKDSDGHQFIITSDRDEHIKISHYPQCF--------------------------IVDKWLFGHKHFVSSICCG-KD 252 (450)
T ss_dssp EEEEEECTTSCEEEEEEETTSCEEEEEESCTT--------------------------CEEEECCCCSSCEEEEEEC-ST
T ss_pred EEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc--------------------------eeeeeecCCCCceEEEEEC-CC
Confidence 9999999 9999999999999999987652 3444 45899999999999 99
Q ss_pred CEEEEEeCCCcEEEeeCCCCeEEEEeecC-------------------------CCCCeEEEEEcC--CCcc-c-CCCeE
Q psy8430 284 EQVITASWDRVANLFDVETGTILQSLTGH-------------------------DEEPHILCVSSY--YSKV-S-CDLFQ 334 (361)
Q Consensus 284 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~h-------------------------~~~v~~~~~s~s--~~~v-~-~dg~i 334 (361)
.+|++++.|+.|++||+++++++..+..+ ...+..+.++++ ++++ + .|+.|
T Consensus 253 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i 332 (450)
T 2vdu_B 253 YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCI 332 (450)
T ss_dssp TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeE
Confidence 99999999999999999999999888643 233444444443 2222 2 79999
Q ss_pred EEEcCCC--CCCCCcceeeeeeccc
Q psy8430 335 RIQHLDC--GTSENPIHSVCVFQDI 357 (361)
Q Consensus 335 ~iW~~d~--~~~~~~~~~v~~~~~h 357 (361)
+|| |+ .++ ....++..+.+|
T Consensus 333 ~iw--~~~~~~~-~~l~~~~~~~~~ 354 (450)
T 2vdu_B 333 IIL--EMSEKQK-GDLALKQIITFP 354 (450)
T ss_dssp EEE--EECSSST-TCEEEEEEEECS
T ss_pred EEE--EeccCCC-CceeeccEeccC
Confidence 999 55 222 224677777777
No 102
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.90 E-value=2.4e-22 Score=182.27 Aligned_cols=169 Identities=15% Similarity=0.154 Sum_probs=140.9
Q ss_pred eEEeecc-----CCCeEEEEEc----CCCCE-EEEEeCCCcEEEEeCCC------CeEEE-----EE-------eCCCCC
Q psy8430 154 IRSFSGH-----RDGVWDVAVR----PGQPV-LGSASADRTVRLWSTQT------GKCVL-----QY-------SGHSGS 205 (361)
Q Consensus 154 ~~~l~~h-----~~~V~~l~~~----~~~~~-l~s~s~d~~i~~wd~~~------~~~~~-----~~-------~~h~~~ 205 (361)
+..+.+| .+.|++++|+ |++.+ |++|+.||.|++||+.+ ++.+. .+ ..|...
T Consensus 109 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (397)
T 1sq9_A 109 FEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF 188 (397)
T ss_dssp EEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCC
T ss_pred ceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCC
Confidence 7788888 5999999999 99999 99999999999999988 65554 66 448999
Q ss_pred eEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC---C---CCcEEEEEE
Q psy8430 206 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG---H---SNVVIAADW 279 (361)
Q Consensus 206 v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~v~~~~~ 279 (361)
|.+++|+|++ .+++++.||.|++||++++ .++..+.. | ...|.+++|
T Consensus 189 i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~--------------------------~~~~~~~~~~~h~~~~~~i~~i~~ 241 (397)
T 1sq9_A 189 ATSVDISERG-LIATGFNNGTVQISELSTL--------------------------RPLYNFESQHSMINNSNSIRSVKF 241 (397)
T ss_dssp CCEEEECTTS-EEEEECTTSEEEEEETTTT--------------------------EEEEEEECCC---CCCCCEEEEEE
T ss_pred ceEEEECCCc-eEEEEeCCCcEEEEECCCC--------------------------ceeEEEeccccccccCCccceEEE
Confidence 9999999999 9999999999999998765 35667777 8 999999999
Q ss_pred cCCCCEEEEEeCC---CcEEEeeCCCCeEEEEeec-------------CCCCCeEEEEEcCCC---cccCCCeEEEEcCC
Q psy8430 280 LSDGEQVITASWD---RVANLFDVETGTILQSLTG-------------HDEEPHILCVSSYYS---KVSCDLFQRIQHLD 340 (361)
Q Consensus 280 ~~~~~~l~s~~~d---~~v~iwd~~~~~~~~~~~~-------------h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d 340 (361)
+|++.+|++++.| +.|++||+++++++..+.+ |...|.++.+++... ..+.||.|+|| |
T Consensus 242 ~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw--d 319 (397)
T 1sq9_A 242 SPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFW--D 319 (397)
T ss_dssp CSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEE--E
T ss_pred CCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEE--E
Confidence 9999999999999 9999999999999999998 999998855554311 12389999999 7
Q ss_pred CCCCCCcceeeeeec
Q psy8430 341 CGTSENPIHSVCVFQ 355 (361)
Q Consensus 341 ~~~~~~~~~~v~~~~ 355 (361)
+ +. ..++..+.
T Consensus 320 ~---~~-~~~~~~~~ 330 (397)
T 1sq9_A 320 V---KT-KERITTLN 330 (397)
T ss_dssp T---TT-TEEEEEEE
T ss_pred c---CC-CceeEEEe
Confidence 7 33 46677777
No 103
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.90 E-value=4.3e-22 Score=181.74 Aligned_cols=165 Identities=14% Similarity=0.190 Sum_probs=133.2
Q ss_pred eccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeC----CCCe------EEEEEeC----------CCCCeEEEEEecCCC
Q psy8430 158 SGHRDGVWDVAVRPGQP-VLGSASADRTVRLWST----QTGK------CVLQYSG----------HSGSVNSVRFLPNKD 216 (361)
Q Consensus 158 ~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~----~~~~------~~~~~~~----------h~~~v~~v~~~~~~~ 216 (361)
..|.+.|++++|+|++. +|++|+.|+.|++||+ .+++ ....+.. |...|.+++|+|+++
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 35679999999999999 9999999999999999 8887 4555554 678999999999999
Q ss_pred EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q psy8430 217 LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVAN 296 (361)
Q Consensus 217 ~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~ 296 (361)
+|++++.||.|++||... .....+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 122 ~l~~~~~dg~i~i~~~~~---------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 174 (425)
T 1r5m_A 122 SIVTGVENGELRLWNKTG---------------------------ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTI 174 (425)
T ss_dssp EEEEEETTSCEEEEETTS---------------------------CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEE
T ss_pred EEEEEeCCCeEEEEeCCC---------------------------CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEE
Confidence 999999999999999432 25677888999999999999999999999999999
Q ss_pred EeeCCCCeEEEEeecCCCC---------------CeE-------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeee
Q psy8430 297 LFDVETGTILQSLTGHDEE---------------PHI-------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVF 354 (361)
Q Consensus 297 iwd~~~~~~~~~~~~h~~~---------------v~~-------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~ 354 (361)
+||+.+++.+..+..+... +.+ .+++++ .||.|++| |+.+ ..++..+
T Consensus 175 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~i~~~--d~~~----~~~~~~~ 243 (425)
T 1r5m_A 175 LWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPG-----PKGAIFVY--QITE----KTPTGKL 243 (425)
T ss_dssp EEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEEC-----GGGCEEEE--ETTC----SSCSEEE
T ss_pred EEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEc-----CCCeEEEE--EcCC----Cceeeee
Confidence 9999999999988877665 554 445555 99999999 7733 3445666
Q ss_pred cccccC
Q psy8430 355 QDIQST 360 (361)
Q Consensus 355 ~~h~~~ 360 (361)
.+|...
T Consensus 244 ~~~~~~ 249 (425)
T 1r5m_A 244 IGHHGP 249 (425)
T ss_dssp CCCSSC
T ss_pred ccCCCc
Confidence 677654
No 104
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.90 E-value=2.3e-21 Score=178.98 Aligned_cols=165 Identities=29% Similarity=0.453 Sum_probs=145.9
Q ss_pred cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430 149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH 228 (361)
Q Consensus 149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~ 228 (361)
.+++.+.++.+|.+.|.+++|+ +..+++|+.||+|++||+.+++.+..+.+|...|.+++| ++..+++++.||.|+
T Consensus 187 ~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~ 262 (445)
T 2ovr_B 187 ETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVK 262 (445)
T ss_dssp TTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEE
T ss_pred CcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEE
Confidence 4567889999999999999996 568999999999999999999999999999999999999 788999999999999
Q ss_pred EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430 229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS 308 (361)
Q Consensus 229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 308 (361)
+||++++ .++..+.+|...|.+++| ++.++++++.|+.|++||+++++++.+
T Consensus 263 iwd~~~~--------------------------~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~ 314 (445)
T 2ovr_B 263 VWDPETE--------------------------TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHT 314 (445)
T ss_dssp EEEGGGT--------------------------EEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEECCCC--------------------------cEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEE
Confidence 9998765 356778899999999999 899999999999999999999999999
Q ss_pred eecCCCCCeE------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecc
Q psy8430 309 LTGHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQD 356 (361)
Q Consensus 309 ~~~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~ 356 (361)
+.+|...+.+ ++++++ .||.|++| |+ +. ..++..+.+
T Consensus 315 ~~~~~~~v~~~~~~~~~l~~~~-----~dg~i~vw--d~---~~-~~~~~~~~~ 357 (445)
T 2ovr_B 315 LTGHQSLTSGMELKDNILVSGN-----ADSTVKIW--DI---KT-GQCLQTLQG 357 (445)
T ss_dssp ECCCCSCEEEEEEETTEEEEEE-----TTSCEEEE--ET---TT-CCEEEEECS
T ss_pred EcCCcccEEEEEEeCCEEEEEe-----CCCeEEEE--EC---CC-CcEEEEEcc
Confidence 9999988887 555666 99999999 77 33 445666765
No 105
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.90 E-value=2.8e-22 Score=182.07 Aligned_cols=163 Identities=19% Similarity=0.243 Sum_probs=134.8
Q ss_pred eeeEEeeccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEe-------------CCCCCeEEEEEec-CCC
Q psy8430 152 YKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYS-------------GHSGSVNSVRFLP-NKD 216 (361)
Q Consensus 152 ~~~~~l~~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-------------~h~~~v~~v~~~~-~~~ 216 (361)
+....+.+|.+.|++++|+| ++++|++|+.||+|++||+.++.....+. +|...|.+++|+| ++.
T Consensus 34 ~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 34 KDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp TTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred cceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 44556778999999999999 99999999999999999998875443332 5999999999999 788
Q ss_pred EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC---CCEEEEEeCCC
Q psy8430 217 LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD---GEQVITASWDR 293 (361)
Q Consensus 217 ~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~d~ 293 (361)
+|++++.||.|++||+.++. ....+ .+...+.++.|+|. +.++++++.|+
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~--------------------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQ--------------------------TADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGP 166 (408)
T ss_dssp CEEEEETTSEEEEEETTTTE--------------------------EEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSS
T ss_pred EEEEEeCCCeEEEeeCCCCc--------------------------cceec-cCCCceeeeEeecCCCCCcEEEEEcCCC
Confidence 99999999999999997652 23333 37788999999984 44999999999
Q ss_pred cEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC----cccCCCeEEEEcCCCCC
Q psy8430 294 VANLFDVETGTILQSLTGHDEEPHILCVSSYYS----KVSCDLFQRIQHLDCGT 343 (361)
Q Consensus 294 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~----~v~~dg~i~iW~~d~~~ 343 (361)
.|++||+++++.+..+.+|...|.++.+++... ..+.||.|++| |+++
T Consensus 167 ~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~--d~~~ 218 (408)
T 4a11_B 167 KVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLW--DVRR 218 (408)
T ss_dssp SEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEE--ETTC
T ss_pred eEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEE--ECCC
Confidence 999999999999999999999999855554421 12389999999 7743
No 106
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.90 E-value=4.2e-22 Score=181.75 Aligned_cols=163 Identities=20% Similarity=0.275 Sum_probs=139.7
Q ss_pred EEeeccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCC------CCCeEEEEEecCC-CEEEEEECCC-
Q psy8430 155 RSFSGHRDGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGH------SGSVNSVRFLPNK-DLVLSASGDK- 225 (361)
Q Consensus 155 ~~l~~h~~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h------~~~v~~v~~~~~~-~~l~s~~~d~- 225 (361)
..+.+|.+.|.+++|+|+ +.+|++++.|+.|++||+.+++.+..+..| ...|.+++|+|++ .++++++.|+
T Consensus 159 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 238 (416)
T 2pm9_A 159 GQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN 238 (416)
T ss_dssp CCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS
T ss_pred ccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC
Confidence 345789999999999998 789999999999999999999999888876 7899999999987 6899999999
Q ss_pred --cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCC
Q psy8430 226 --SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLS-DGEQVITASWDRVANLFDVE 301 (361)
Q Consensus 226 --~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~ 301 (361)
.|++||++++. .+...+. +|...|.+++|+| ++.+|++++.|+.|++||++
T Consensus 239 ~~~i~~~d~~~~~-------------------------~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~ 293 (416)
T 2pm9_A 239 DPSILIWDLRNAN-------------------------TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPE 293 (416)
T ss_dssp SCCCCEEETTSTT-------------------------SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSS
T ss_pred CceEEEEeCCCCC-------------------------CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCC
Confidence 99999997642 1445566 8999999999999 99999999999999999999
Q ss_pred CCeEEEEeecCCCCCeEEEEEcCC-C---cccCCCeEEEEcCCCCCC
Q psy8430 302 TGTILQSLTGHDEEPHILCVSSYY-S---KVSCDLFQRIQHLDCGTS 344 (361)
Q Consensus 302 ~~~~~~~~~~h~~~v~~~~~s~s~-~---~v~~dg~i~iW~~d~~~~ 344 (361)
+++++..+.+|...|.++.+++.. . ..+.||.|+|| |+.+.
T Consensus 294 ~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw--~~~~~ 338 (416)
T 2pm9_A 294 SAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQ--TLQNL 338 (416)
T ss_dssp SCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEE--ESCCC
T ss_pred CCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEE--EccCC
Confidence 999999999999988875555432 1 12489999999 66443
No 107
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.89 E-value=1.2e-21 Score=174.05 Aligned_cols=219 Identities=8% Similarity=-0.010 Sum_probs=158.3
Q ss_pred eeccceeEEeeecCccc-eeeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeC-CCCeEEEEEeC--CCCCeEE
Q psy8430 134 KVQTSKIVSSFKTSLLS-CYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWST-QTGKCVLQYSG--HSGSVNS 208 (361)
Q Consensus 134 ~~~~~~~~~~~~~~~~~-~~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~-~~~~~~~~~~~--h~~~v~~ 208 (361)
.+..+..+..|...... ......+.+|.+.|++++|+|++. +|++|+.||.|++||+ .+++. ..+.+ |...|.+
T Consensus 28 ~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~ 106 (342)
T 1yfq_A 28 ITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICR 106 (342)
T ss_dssp EEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEE
T ss_pred EEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEE
Confidence 34445556666654433 233456669999999999999999 9999999999999999 87764 67788 9999999
Q ss_pred EEEecCCCEEEEEECCCcEEEEeccc---------cccccCCCCCCCCCCCC-CC----------CCCceeccc-----c
Q psy8430 209 VRFLPNKDLVLSASGDKSVHIWQAVI---------NWECLNNDNDSDLDESK-EP----------DESSITLRT-----P 263 (361)
Q Consensus 209 v~~~~~~~~l~s~~~d~~i~lwd~~~---------~~~~~~~~~~~~~~~~~-~~----------~~~~~~~~~-----~ 263 (361)
++|+| +..+++++.|+.|++||+++ ................. .+ ....+.... .
T Consensus 107 l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 185 (342)
T 1yfq_A 107 ICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNG 185 (342)
T ss_dssp EEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCC
T ss_pred EEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEeCCCeEEEEECCccccccc
Confidence 99999 99999999999999999987 54333222111110000 00 000111111 2
Q ss_pred cEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCCCC------eEEEEeecCCC---------CCeEEEEEcCCC-
Q psy8430 264 VKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETG------TILQSLTGHDE---------EPHILCVSSYYS- 326 (361)
Q Consensus 264 ~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~------~~~~~~~~h~~---------~v~~~~~s~s~~- 326 (361)
......|...+.+++|+| ++.++++++.||.|++||++.+ +....+.+|.. .|.++.+++.+.
T Consensus 186 ~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 265 (342)
T 1yfq_A 186 TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKF 265 (342)
T ss_dssp EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCC
T ss_pred eeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCE
Confidence 224446788999999999 9999999999999999999887 77888888865 777755554321
Q ss_pred --cccCCCeEEEEcCCCCCCCCcceeeeeeccc-ccC
Q psy8430 327 --KVSCDLFQRIQHLDCGTSENPIHSVCVFQDI-QST 360 (361)
Q Consensus 327 --~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h-~~~ 360 (361)
..+.||.|++| |+ +. ..++..+.+| .+.
T Consensus 266 l~~~~~dg~i~vw--d~---~~-~~~~~~~~~~h~~~ 296 (342)
T 1yfq_A 266 LYTAGSDGIISCW--NL---QT-RKKIKNFAKFNEDS 296 (342)
T ss_dssp EEEEETTSCEEEE--ET---TT-TEEEEECCCCSSSE
T ss_pred EEEecCCceEEEE--cC---cc-HhHhhhhhcccCCC
Confidence 12389999999 77 33 5668888888 654
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=3.3e-22 Score=184.96 Aligned_cols=170 Identities=15% Similarity=0.132 Sum_probs=138.9
Q ss_pred eeccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCC--CCeEEEEEe--CCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430 157 FSGHRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQ--TGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231 (361)
Q Consensus 157 l~~h~~~V~~l~~~~~~~~l-~s~s~d~~i~~wd~~--~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd 231 (361)
..+|.+.|++++|+|++.+| ++|+.||+|++||+. +++.+..+. .|...|.+++|+|++.+|++++.||.+.+|+
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~ 177 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSID 177 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 34788999999999999986 899999999999999 888887776 5779999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC---CCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430 232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD---GEQVITASWDRVANLFDVETGTILQS 308 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~d~~v~iwd~~~~~~~~~ 308 (361)
+..+.... .+...+.+|...|.+++|+|+ +++|++|+.|+.|++||+++++++..
T Consensus 178 ~~~~~~~~----------------------~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~ 235 (450)
T 2vdu_B 178 INSIPEEK----------------------FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDK 235 (450)
T ss_dssp TTSCCCSS----------------------CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEE
T ss_pred cCCccccc----------------------ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeee
Confidence 87552210 023356679999999999999 99999999999999999999998887
Q ss_pred -eecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeeeec
Q psy8430 309 -LTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCVFQ 355 (361)
Q Consensus 309 -~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~~~ 355 (361)
+.+|...|.++.++ +.. ..+.|+.|+|| |+.++ .++..+.
T Consensus 236 ~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vw--d~~~~----~~~~~~~ 279 (450)
T 2vdu_B 236 WLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAW--DWKTG----KNLSTFD 279 (450)
T ss_dssp ECCCCSSCEEEEEEC-STTEEEEEESSSEEEEE--ETTTC----CEEEEEE
T ss_pred eecCCCCceEEEEEC-CCCEEEEEeCCCeEEEE--ECCCC----cEeeeec
Confidence 56899999986665 311 23599999999 77333 3444454
No 109
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.89 E-value=2.7e-21 Score=185.25 Aligned_cols=174 Identities=17% Similarity=0.177 Sum_probs=151.1
Q ss_pred ceeeeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCC---CeEEEEEecC-CCEEEEEECC
Q psy8430 150 SCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSG---SVNSVRFLPN-KDLVLSASGD 224 (361)
Q Consensus 150 ~~~~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~---~v~~v~~~~~-~~~l~s~~~d 224 (361)
.++.+..+.+|.+.|++++|+|++. .+++++.|+.|++||+.+++.+..+.+|.. .|.+++|+|+ +++|++++.|
T Consensus 149 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 228 (615)
T 1pgu_A 149 SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD 228 (615)
T ss_dssp TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETT
T ss_pred CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCC
Confidence 3467788899999999999999998 899999999999999999999999999999 9999999999 9999999999
Q ss_pred CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE-e---CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeC
Q psy8430 225 KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL-L---GHSNVVIAADWLSDGEQVITASWDRVANLFDV 300 (361)
Q Consensus 225 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 300 (361)
|.|++||+.++. .+..+ . +|...|.+++|+ ++.++++++.|+.|++||+
T Consensus 229 g~i~vwd~~~~~--------------------------~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~ 281 (615)
T 1pgu_A 229 RKISCFDGKSGE--------------------------FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDV 281 (615)
T ss_dssp CCEEEEETTTCC--------------------------EEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEET
T ss_pred CeEEEEECCCCC--------------------------EeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEEC
Confidence 999999987652 44555 4 799999999999 9999999999999999999
Q ss_pred CCCeEEEEeecCC----CCCeE-------EEEEcCCCcccCCCeEEEEcCCCCCCCCcceeeeeecccccCC
Q psy8430 301 ETGTILQSLTGHD----EEPHI-------LCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQSTG 361 (361)
Q Consensus 301 ~~~~~~~~~~~h~----~~v~~-------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~~~~ 361 (361)
++++++..+..+. ..+.+ .+++++ .||.|++| |+ +. ..++..+.+|.+.|
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~g~i~~~--d~---~~-~~~~~~~~~~~~~v 342 (615)
T 1pgu_A 282 TTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS-----LDGTLNFY--EL---GH-DEVLKTISGHNKGI 342 (615)
T ss_dssp TTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEE-----TTSCEEEE--ET---TE-EEEEEEECCCSSCE
T ss_pred CCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEE-----CCCCEEEE--EC---CC-CcEEEEEeCCCCCE
Confidence 9999999998773 33333 455566 99999999 77 43 56788888988753
No 110
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.89 E-value=8.5e-22 Score=177.16 Aligned_cols=171 Identities=13% Similarity=0.091 Sum_probs=130.6
Q ss_pred ccCCCeEEEEEcCCCCEEEEE--eCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccc
Q psy8430 159 GHRDGVWDVAVRPGQPVLGSA--SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW 236 (361)
Q Consensus 159 ~h~~~V~~l~~~~~~~~l~s~--s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~ 236 (361)
.+...+.+++|+|||++++++ +.|++|++||+.+++.+..+. |.+.|.+++|+|+|+++++++.|+ +.+|+..++.
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~ 208 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGS 208 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCC
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCc
Confidence 345668999999999987654 478999999999999998887 888999999999999999988554 5666554442
Q ss_pred cccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC----cEEEeeCCCCeE----EEE
Q psy8430 237 ECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR----VANLFDVETGTI----LQS 308 (361)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~----~v~iwd~~~~~~----~~~ 308 (361)
.. ......+|...|.+++|+|++.++++++.|+ .+++||+..+.. ...
T Consensus 209 ~~------------------------~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~ 264 (365)
T 4h5i_A 209 CI------------------------ARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQ 264 (365)
T ss_dssp EE------------------------EEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEE
T ss_pred ce------------------------eeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeee
Confidence 11 1223456888999999999999999999887 588899876643 356
Q ss_pred eecCCCCCeEEEEEcCCCc---ccCCCeEEEEcCCCCCCCCcceeeee-ecccccCC
Q psy8430 309 LTGHDEEPHILCVSSYYSK---VSCDLFQRIQHLDCGTSENPIHSVCV-FQDIQSTG 361 (361)
Q Consensus 309 ~~~h~~~v~~~~~s~s~~~---v~~dg~i~iW~~d~~~~~~~~~~v~~-~~~h~~~~ 361 (361)
+.+|...|.++.+++++.. .+.|+.|+|| |+ +. .+++.. +.||.+.|
T Consensus 265 ~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iw--d~---~~-~~~~~~~~~gH~~~V 315 (365)
T 4h5i_A 265 VTNRFKGITSMDVDMKGELAVLASNDNSIALV--KL---KD-LSMSKIFKQAHSFAI 315 (365)
T ss_dssp EESSCSCEEEEEECTTSCEEEEEETTSCEEEE--ET---TT-TEEEEEETTSSSSCE
T ss_pred ecCCCCCeEeEEECCCCCceEEEcCCCEEEEE--EC---CC-CcEEEEecCcccCCE
Confidence 7789999988544443221 1399999999 87 44 556766 47998764
No 111
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.6e-21 Score=194.62 Aligned_cols=164 Identities=9% Similarity=0.015 Sum_probs=134.4
Q ss_pred eccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccccc
Q psy8430 158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 237 (361)
Q Consensus 158 ~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~ 237 (361)
.+|.+.|++++|+|++.+||+|+.||+|++|+...++....+. |...|.+++|+| +++|++++.|++|++||+.++.
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~- 90 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK- 90 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS-
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc-
Confidence 4899999999999999999999999999999998887766554 888999999999 8899999999999999997652
Q ss_pred ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE-----------
Q psy8430 238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL----------- 306 (361)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~----------- 306 (361)
++..+. |...|++++|+|+++++++|+.||.|++||++++.+.
T Consensus 91 -------------------------~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~ 144 (902)
T 2oaj_A 91 -------------------------VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSS 144 (902)
T ss_dssp -------------------------EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHH
T ss_pred -------------------------EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccc
Confidence 344443 6689999999999999999999999999999988764
Q ss_pred EEeecCCCCCeEEEEEcC----CCcccCCCeEEEEcCCCCCCCCcceeeeeeccc
Q psy8430 307 QSLTGHDEEPHILCVSSY----YSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDI 357 (361)
Q Consensus 307 ~~~~~h~~~v~~~~~s~s----~~~v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h 357 (361)
..+.+|.+.|.++.+++. .+..+.||.| || |+ +. ..++..|.+|
T Consensus 145 ~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lW--d~---~~-~~~~~~~~~~ 192 (902)
T 2oaj_A 145 FFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TY--SL---VE-NEIKQSFIYE 192 (902)
T ss_dssp TCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EE--ET---TT-TEEEEEECCC
T ss_pred cccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EE--EC---CC-CceEEEEecc
Confidence 234568888887555542 1112389999 99 77 33 4556667666
No 112
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.88 E-value=5.3e-22 Score=176.23 Aligned_cols=157 Identities=12% Similarity=0.068 Sum_probs=133.3
Q ss_pred EeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe---EEEEEeCCCCCeEEEEEecCCC-EEEEEECCCcEEEEe
Q psy8430 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK---CVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQ 231 (361)
Q Consensus 156 ~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~---~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~lwd 231 (361)
...+|.+.|++++|+|++.+|++|+.|+.|++||+.++. ....+.+|...|.+++|+|+++ +|++++.||.|++||
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence 345899999999999999999999999999999998776 3455567999999999999999 999999999999999
Q ss_pred c-cccccccCCCCCCCCCCCCCCCCCceecccccEEEeC--CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC------
Q psy8430 232 A-VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG--HSNVVIAADWLSDGEQVITASWDRVANLFDVET------ 302 (361)
Q Consensus 232 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~------ 302 (361)
+ .++ ....+.+ |...|.+++|+| +.++++++.|+.|++||+++
T Consensus 86 ~~~~~---------------------------~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~ 137 (342)
T 1yfq_A 86 LIGSP---------------------------SFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVI 137 (342)
T ss_dssp SSSSS---------------------------SEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCE
T ss_pred eccCC---------------------------ceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccc
Confidence 8 655 3356677 999999999999 99999999999999999998
Q ss_pred ---CeEEEEeecCCCCCeEEEEEcCCC-cccCCCeEEEEcCCCCC
Q psy8430 303 ---GTILQSLTGHDEEPHILCVSSYYS-KVSCDLFQRIQHLDCGT 343 (361)
Q Consensus 303 ---~~~~~~~~~h~~~v~~~~~s~s~~-~v~~dg~i~iW~~d~~~ 343 (361)
++++..+. |...+.++.+++..+ ..+.||.|++| |+.+
T Consensus 138 ~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~--d~~~ 179 (342)
T 1yfq_A 138 AVKNLNSNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWF--RLPL 179 (342)
T ss_dssp EEEESCSSSSS-SCCCEEEEEECSSEEEEEESTTEEEEE--ESSC
T ss_pred cccCCeeeEEe-eCCceEEEEecCCcEEEEeCCCeEEEE--ECCc
Confidence 77777776 788888755544422 12389999999 7744
No 113
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.88 E-value=1.1e-21 Score=175.11 Aligned_cols=194 Identities=13% Similarity=0.116 Sum_probs=145.7
Q ss_pred ceeEEeeecCccceeeeEEeeccCCCeEEEEEcCC---CCEEEEEeCCCcEEEEeCCCCe-EEEEEeCCCCCeEEEEE--
Q psy8430 138 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPG---QPVLGSASADRTVRLWSTQTGK-CVLQYSGHSGSVNSVRF-- 211 (361)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~---~~~l~s~s~d~~i~~wd~~~~~-~~~~~~~h~~~v~~v~~-- 211 (361)
+..+..|............ .+|.+.|.+++|+|+ +.+|++|+.||.|++||+.+++ .+..+.+|...|.+++|
T Consensus 43 d~~v~iw~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 121 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLRE-IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIG 121 (357)
T ss_dssp CEEEEEEEECSSSEEEEEE-EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEES
T ss_pred CcEEEEEeCCCCcccceee-ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeecc
Confidence 5566667665544433333 379999999999998 6999999999999999999887 88899999999999965
Q ss_pred ----ecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCC----cEEEEE----E
Q psy8430 212 ----LPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN----VVIAAD----W 279 (361)
Q Consensus 212 ----~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~----~ 279 (361)
+|+++.|++++.||.|++||+.++.. +...+..|.+ .+.+++ |
T Consensus 122 ~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~-------------------------~~~~~~~~~~~~~~~v~~~~~~~~~ 176 (357)
T 3i2n_A 122 GLGIGEGAPEIVTGSRDGTVKVWDPRQKDD-------------------------PVANMEPVQGENKRDCWTVAFGNAY 176 (357)
T ss_dssp GGGCC-CCCEEEEEETTSCEEEECTTSCSS-------------------------CSEEECCCTTSCCCCEEEEEEECCC
T ss_pred ccccCCCccEEEEEeCCCeEEEEeCCCCCC-------------------------cceeccccCCCCCCceEEEEEEecc
Confidence 67899999999999999999876521 3455544443 788888 7
Q ss_pred cCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEc---CCC---cccCCCeEEEEcCCCCCCCCcc-eeee
Q psy8430 280 LSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSS---YYS---KVSCDLFQRIQHLDCGTSENPI-HSVC 352 (361)
Q Consensus 280 ~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~---s~~---~v~~dg~i~iW~~d~~~~~~~~-~~v~ 352 (361)
+|++.++++++.|+.|++||+++++.... ..|...+.++.+++ ... ..+.||.|++| |+.+++... ....
T Consensus 177 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~--d~~~~~~~~~~~~~ 253 (357)
T 3i2n_A 177 NQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVF--DMRTQHPTKGFASV 253 (357)
T ss_dssp C-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEE--EEEEEETTTEEEEE
T ss_pred CCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEE--eCcCCCcccceeee
Confidence 88999999999999999999999887544 55788888877765 311 23589999999 773322211 1122
Q ss_pred eecccccC
Q psy8430 353 VFQDIQST 360 (361)
Q Consensus 353 ~~~~h~~~ 360 (361)
.+.+|...
T Consensus 254 ~~~~~~~~ 261 (357)
T 3i2n_A 254 SEKAHKST 261 (357)
T ss_dssp EEECCSSC
T ss_pred ccCCCcCC
Confidence 34477654
No 114
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.88 E-value=6.2e-21 Score=182.68 Aligned_cols=187 Identities=19% Similarity=0.165 Sum_probs=155.7
Q ss_pred ccceeEEeeecCcc------ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEeCCCCeEEEEEeCCCCC
Q psy8430 136 QTSKIVSSFKTSLL------SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD----RTVRLWSTQTGKCVLQYSGHSGS 205 (361)
Q Consensus 136 ~~~~~~~~~~~~~~------~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d----~~i~~wd~~~~~~~~~~~~h~~~ 205 (361)
..+..+..|..... ....+..+.+|.+.|.+++|+|++.+|++++.| +.|++|| .++.+..+.+|...
T Consensus 85 ~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~ 162 (615)
T 1pgu_A 85 DESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQR 162 (615)
T ss_dssp ETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSC
T ss_pred cCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCcc
Confidence 33445556665444 567888999999999999999999999999988 6888888 67788899999999
Q ss_pred eEEEEEecCCC-EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCC---cEEEEEEcC
Q psy8430 206 VNSVRFLPNKD-LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN---VVIAADWLS 281 (361)
Q Consensus 206 v~~v~~~~~~~-~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~ 281 (361)
|.+++|+|++. .+++++.|+.|++||+.+. .....+.+|.. .|.+++|+|
T Consensus 163 v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~--------------------------~~~~~~~~~~~~~~~v~~~~~~~ 216 (615)
T 1pgu_A 163 INACHLKQSRPMRSMTVGDDGSVVFYQGPPF--------------------------KFSASDRTHHKQGSFVRDVEFSP 216 (615)
T ss_dssp EEEEEECSSSSCEEEEEETTTEEEEEETTTB--------------------------EEEEEECSSSCTTCCEEEEEECS
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEEeCCCc--------------------------ceeeeecccCCCCceEEEEEECC
Confidence 99999999998 8999999999999998755 35667788998 999999999
Q ss_pred C-CCEEEEEeCCCcEEEeeCCCCeEEEEe-e---cCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCCCCcceeeee
Q psy8430 282 D-GEQVITASWDRVANLFDVETGTILQSL-T---GHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTSENPIHSVCV 353 (361)
Q Consensus 282 ~-~~~l~s~~~d~~v~iwd~~~~~~~~~~-~---~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~~~~~~~v~~ 353 (361)
+ ++++++++.|+.|++||+++++.+..+ . .|...|.++.++ +.. ..+.||.|++| |+ +. ..++..
T Consensus 217 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~w--d~---~~-~~~~~~ 289 (615)
T 1pgu_A 217 DSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVW--DV---TT-SKCVQK 289 (615)
T ss_dssp TTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEE--ET---TT-TEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEE--EC---CC-CcEEEE
Confidence 9 999999999999999999999999999 6 899999886554 311 22489999999 77 33 455666
Q ss_pred eccc
Q psy8430 354 FQDI 357 (361)
Q Consensus 354 ~~~h 357 (361)
+..|
T Consensus 290 ~~~~ 293 (615)
T 1pgu_A 290 WTLD 293 (615)
T ss_dssp EECC
T ss_pred EcCC
Confidence 6665
No 115
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.88 E-value=1.3e-20 Score=171.03 Aligned_cols=157 Identities=25% Similarity=0.317 Sum_probs=130.9
Q ss_pred ccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC---CCEEEEEECCCcEEEEeccc
Q psy8430 159 GHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN---KDLVLSASGDKSVHIWQAVI 234 (361)
Q Consensus 159 ~h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~---~~~l~s~~~d~~i~lwd~~~ 234 (361)
+|.+.|.+++|+| ++.+|++++.|+.|++||+.+++.+..+. +...+.++.|+|. +.++++++.|+.|++||+.+
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 5999999999999 77899999999999999999999888887 8889999999984 44999999999999999876
Q ss_pred cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEeeCCCCe-EEEEe---
Q psy8430 235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLFDVETGT-ILQSL--- 309 (361)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~-~~~~~--- 309 (361)
+ .....+.+|...|.+++|+|++. .+++++.||.|++||++++. ++..+
T Consensus 176 ~--------------------------~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~ 229 (408)
T 4a11_B 176 G--------------------------SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQH 229 (408)
T ss_dssp S--------------------------CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTT
T ss_pred c--------------------------ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccccccc
Confidence 5 25677888999999999999999 58999999999999998765 44444
Q ss_pred ------------ecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCCCCC
Q psy8430 310 ------------TGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDCGTS 344 (361)
Q Consensus 310 ------------~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~~~ 344 (361)
..|...|.++.+++... ..+.||.|++| |+.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw--d~~~~ 277 (408)
T 4a11_B 230 NGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLW--NSSNG 277 (408)
T ss_dssp TTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEE--ETTTC
T ss_pred ccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEE--ECCCC
Confidence 56777787755444321 12389999999 66443
No 116
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.87 E-value=2.1e-20 Score=171.22 Aligned_cols=161 Identities=19% Similarity=0.349 Sum_probs=133.8
Q ss_pred eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe----EEEEEeCCCCCeEEEEEecCCC-EEEEE--ECC
Q psy8430 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK----CVLQYSGHSGSVNSVRFLPNKD-LVLSA--SGD 224 (361)
Q Consensus 152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~----~~~~~~~h~~~v~~v~~~~~~~-~l~s~--~~d 224 (361)
..+.++.+|...+.++.|+|++.++++++.|+.+++|+..+++ .+.....|...|.+++|+|.+. .++++ +.|
T Consensus 221 ~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D 300 (420)
T 4gga_A 221 HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 300 (420)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTT
T ss_pred eeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCC
Confidence 4667889999999999999999999999999999999998764 3566778999999999999654 55554 479
Q ss_pred CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe--CCCcEEEeeCCC
Q psy8430 225 KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS--WDRVANLFDVET 302 (361)
Q Consensus 225 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~v~iwd~~~ 302 (361)
++|++||+.++. +...+. +...+.++.|+|++..+++++ .|+.|+|||+.+
T Consensus 301 ~~I~iwd~~t~~--------------------------~~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~ 353 (420)
T 4gga_A 301 RHIRIWNVCSGA--------------------------CLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT 353 (420)
T ss_dssp CEEEEEETTTTE--------------------------EEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT
T ss_pred CEEEEEeCCccc--------------------------cceeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCC
Confidence 999999998762 344444 446788999999999998876 689999999999
Q ss_pred CeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCC
Q psy8430 303 GTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDC 341 (361)
Q Consensus 303 ~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~ 341 (361)
++++.++.+|.+.|.++.+++++. +.+.||+|+|| |+
T Consensus 354 ~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriW--dv 393 (420)
T 4gga_A 354 MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLW--RC 393 (420)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEE--CC
T ss_pred CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEE--EC
Confidence 999999999999999966655422 23499999999 66
No 117
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.87 E-value=2.2e-21 Score=172.90 Aligned_cols=179 Identities=8% Similarity=-0.030 Sum_probs=139.4
Q ss_pred eeeeeccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC---------CCeEEEEEe-
Q psy8430 131 NKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ---------TGKCVLQYS- 200 (361)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~---------~~~~~~~~~- 200 (361)
....+..+..+..|... +++.+..+. .+.|.++.|+|+ +++|+.|++|++|+.. +++.+..+.
T Consensus 50 ~l~sg~~Dg~v~iwd~~--~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 122 (343)
T 3lrv_A 50 VCMCRCEDGALHFTQLK--DSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEV 122 (343)
T ss_dssp EEEEEEETTEEEEEEES--SSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred EEEEECCCCcEEEEECC--CCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeec
Confidence 34455666667666654 344555555 567888899998 9999999999999665 455455554
Q ss_pred CCCCCeEEEEEec--CCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEE
Q psy8430 201 GHSGSVNSVRFLP--NKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAA 277 (361)
Q Consensus 201 ~h~~~v~~v~~~~--~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~ 277 (361)
+|.+.|.+++|+| +++++++++.||+|++||+.++. +.... ..|...+.++
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~--------------------------~~~~~~~~~~~~i~~~ 176 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS--------------------------QYIVHSAKSDVEYSSG 176 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC--------------------------EEEEECCCSSCCCCEE
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc--------------------------EEEEEecCCCCceEEE
Confidence 6778999999999 99999999999999999997652 22333 2355679999
Q ss_pred EEcCCCCEEEEEeCCCcEEEeeCCCCeEE-EEeec-CCCCCeEEEEEcCCC--cccCCCeEEEEcCCCCCC
Q psy8430 278 DWLSDGEQVITASWDRVANLFDVETGTIL-QSLTG-HDEEPHILCVSSYYS--KVSCDLFQRIQHLDCGTS 344 (361)
Q Consensus 278 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~-~~~~~-h~~~v~~~~~s~s~~--~v~~dg~i~iW~~d~~~~ 344 (361)
+|+|+|.++++|+.||.|++||+++++.+ ..+.. |...|.++.+++... ..+.|+.|+|| |++++
T Consensus 177 ~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iw--d~~~~ 245 (343)
T 3lrv_A 177 VLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCF--DLRKD 245 (343)
T ss_dssp EECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEE--ETTSS
T ss_pred EECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEE--EcCCC
Confidence 99999999999999999999999999988 88888 999999988776633 23446799999 87443
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.87 E-value=1.4e-21 Score=177.59 Aligned_cols=153 Identities=16% Similarity=0.095 Sum_probs=112.4
Q ss_pred ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE-----EEeCCCCCeEEEEEec--------CCCEEEEEECCC
Q psy8430 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-----QYSGHSGSVNSVRFLP--------NKDLVLSASGDK 225 (361)
Q Consensus 159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~-----~~~~h~~~v~~v~~~~--------~~~~l~s~~~d~ 225 (361)
.|.+.+....+++++.+|++|+.|++|++||..++.... .+.+|.+.|++|+|+| ++++|++|+.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 344445445556677799999999999999998886433 3568999999999998 788999999999
Q ss_pred cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEeeCCCCe
Q psy8430 226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGE-QVITASWDRVANLFDVETGT 304 (361)
Q Consensus 226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~ 304 (361)
+|+|||+.++ .+...+.+|...+.+++|+|++. +|++++.|++|++||+++++
T Consensus 167 tv~~Wd~~~~--------------------------~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 167 TLIIWRLTDE--------------------------GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNL 220 (393)
T ss_dssp EEEEEEEETT--------------------------EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC
T ss_pred eEEEEECCCC--------------------------ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCc
Confidence 9999998655 25666778999999999999875 79999999999999999876
Q ss_pred EEEEe-------------------------ecCCCCCeE---------EEEEcCCCcccCCCeEEEEcCCCCCC
Q psy8430 305 ILQSL-------------------------TGHDEEPHI---------LCVSSYYSKVSCDLFQRIQHLDCGTS 344 (361)
Q Consensus 305 ~~~~~-------------------------~~h~~~v~~---------~~~s~s~~~v~~dg~i~iW~~d~~~~ 344 (361)
..... .+|...+.+ .+++++ .|+.+++| |+.++
T Consensus 221 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s-----~d~~i~vw--d~~~~ 287 (393)
T 4gq1_A 221 SAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMC-----KSGAWLRW--NLFAN 287 (393)
T ss_dssp ----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEEC-----TTSEEEEE--EC---
T ss_pred ccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEe-----CCCCEEEE--ECccC
Confidence 54333 234444444 455566 99999999 77443
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.87 E-value=6.3e-21 Score=170.85 Aligned_cols=175 Identities=12% Similarity=0.056 Sum_probs=124.9
Q ss_pred CCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccc-cccc
Q psy8430 162 DGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN-WECL 239 (361)
Q Consensus 162 ~~V~~l~~~~~~~~l-~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~-~~~~ 239 (361)
..+..+++.++++.+ ++|+.|++|++||+.+++.+..+. +...|.+++|+++ .++.+ .|+.|++||+.+. ..+.
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~--~~~~~-~~~~i~i~d~~~~~~~~~ 134 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSRE--FIVVS-YGDVISVFKFGNPWKRIT 134 (355)
T ss_dssp SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSS--EEEEE-ETTEEEEEESSTTCCBSS
T ss_pred CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCC--EEEEE-EcCEEEEEECCCCceeeE
Confidence 357788888888876 567788999999999999998887 7789999999875 33333 4778888888766 2222
Q ss_pred CCCCC--------CCCCC--CCCCC-CCceecc-----------------cc-cEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy8430 240 NNDND--------SDLDE--SKEPD-ESSITLR-----------------TP-VKELLGHSNVVIAADWLSDGEQVITAS 290 (361)
Q Consensus 240 ~~~~~--------~~~~~--~~~~~-~~~~~~~-----------------~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~ 290 (361)
..... ..... ..... ...+... .+ ...+.+|...|.+++|+|+|++|++|+
T Consensus 135 ~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s 214 (355)
T 3vu4_A 135 DDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCS 214 (355)
T ss_dssp CCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEe
Confidence 11100 00000 00000 0001111 12 678899999999999999999999999
Q ss_pred CCCc-EEEeeCCCCeEEEEee-c-CCCCCeEEEEEcCCC---cccCCCeEEEEcCCCC
Q psy8430 291 WDRV-ANLFDVETGTILQSLT-G-HDEEPHILCVSSYYS---KVSCDLFQRIQHLDCG 342 (361)
Q Consensus 291 ~d~~-v~iwd~~~~~~~~~~~-~-h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~~ 342 (361)
.|++ |++||+++++++.++. + |...|.++.+++++. ..+.|+.|+|| |+.
T Consensus 215 ~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw--~~~ 270 (355)
T 3vu4_A 215 QDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVF--EIF 270 (355)
T ss_dssp TTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEE--ESS
T ss_pred CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEE--Ecc
Confidence 9998 9999999999999998 5 999999865555422 22499999999 663
No 120
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.86 E-value=3.9e-20 Score=170.66 Aligned_cols=158 Identities=11% Similarity=0.120 Sum_probs=123.7
Q ss_pred eeEEeeccCC-----CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-------EEEEE----eCCCCCeEEEEEecCCC
Q psy8430 153 KIRSFSGHRD-----GVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-------CVLQY----SGHSGSVNSVRFLPNKD 216 (361)
Q Consensus 153 ~~~~l~~h~~-----~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~-------~~~~~----~~h~~~v~~v~~~~~~~ 216 (361)
++..+. |.. .|.+++|+|||++|++|+.||+|++||+.++. .+.++ .+|...|.+++|+|+|
T Consensus 117 ~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg- 194 (588)
T 2j04_A 117 MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV- 194 (588)
T ss_dssp EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-
T ss_pred eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-
Confidence 666667 765 49999999999999999999999999998875 36776 5778899999999999
Q ss_pred EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEeCCCcE
Q psy8430 217 LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWDRVA 295 (361)
Q Consensus 217 ~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~v 295 (361)
+++++.|++|++||+..+.. ......+ .+|...|.+++|+ |..+++++ +++|
T Consensus 195 -Laass~D~tVrlWd~~~~~~-----------------------~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tI 247 (588)
T 2j04_A 195 -LVAALSNNSVFSMTVSASSH-----------------------QPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYV 247 (588)
T ss_dssp -EEEEETTCCEEEECCCSSSS-----------------------CCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEE
T ss_pred -EEEEeCCCeEEEEECCCCcc-----------------------ccceeeecccccCcEEEEEEE--CCEEEEEe-CCeE
Confidence 88999999999999875521 0123445 3788999999999 68999887 6999
Q ss_pred EEeeCCCCeEEEEeecCCCCCeEEEE--EcCC--Cccc-CCCeEEEEcCC
Q psy8430 296 NLFDVETGTILQSLTGHDEEPHILCV--SSYY--SKVS-CDLFQRIQHLD 340 (361)
Q Consensus 296 ~iwd~~~~~~~~~~~~h~~~v~~~~~--s~s~--~~v~-~dg~i~iW~~d 340 (361)
++||+.+++......+|...+..+.+ ++.. +.++ .||+ ++|.+|
T Consensus 248 kLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 248 HKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 99999988774444479988886444 3331 1111 7999 999433
No 121
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.86 E-value=1.4e-19 Score=158.84 Aligned_cols=162 Identities=20% Similarity=0.337 Sum_probs=133.5
Q ss_pred eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe----EEEEEeCCCCCeEEEEEecCCCEE---EEEEC
Q psy8430 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK----CVLQYSGHSGSVNSVRFLPNKDLV---LSASG 223 (361)
Q Consensus 151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~----~~~~~~~h~~~v~~v~~~~~~~~l---~s~~~ 223 (361)
...+..+.+|...+.++.+++++.+|++++.|++|++||+.+++ .......|.+.|.+++++|.+..+ ++++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 219 (318)
T 4ggc_A 140 EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 219 (318)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT
T ss_pred ceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCC
Confidence 35677888999999999999999999999999999999998764 344556788999999999976543 35667
Q ss_pred CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe--CCCcEEEeeCC
Q psy8430 224 DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS--WDRVANLFDVE 301 (361)
Q Consensus 224 d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~v~iwd~~ 301 (361)
++.|++||.... .......+...+..+.|+|++..+++++ .|+.|++||++
T Consensus 220 ~~~i~lwd~~~~---------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~ 272 (318)
T 4ggc_A 220 DRHIRIWNVCSG---------------------------ACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYP 272 (318)
T ss_dssp TCEEEEEETTTC---------------------------CEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETT
T ss_pred CCEEEEEecccc---------------------------cccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECC
Confidence 899999998755 2334455778899999999999988765 79999999999
Q ss_pred CCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCC
Q psy8430 302 TGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDC 341 (361)
Q Consensus 302 ~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~ 341 (361)
+++++.++.+|.+.|.++.+++++. +.+.||+|+|| |+
T Consensus 273 ~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iW--d~ 313 (318)
T 4ggc_A 273 TMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLW--RC 313 (318)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEE--CC
T ss_pred CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEE--EC
Confidence 9999999999999999965554422 23499999999 76
No 122
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.83 E-value=3.9e-19 Score=159.14 Aligned_cols=99 Identities=17% Similarity=0.291 Sum_probs=87.4
Q ss_pred EeCCCcEEEEeCCCCe----------------EEEEEeCCCCCeEEEEEecCCCEEEEEECCCc-EEEEeccccccccCC
Q psy8430 179 ASADRTVRLWSTQTGK----------------CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS-VHIWQAVINWECLNN 241 (361)
Q Consensus 179 ~s~d~~i~~wd~~~~~----------------~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-i~lwd~~~~~~~~~~ 241 (361)
|+.||+|++||+.++. .+..+.+|.+.|.+++|+|++++|++|+.|++ |++||++++
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~------ 228 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG------ 228 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC------
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC------
Confidence 5788999999998765 26788999999999999999999999999998 999999866
Q ss_pred CCCCCCCCCCCCCCCceecccccEEEe-C-CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC
Q psy8430 242 DNDSDLDESKEPDESSITLRTPVKELL-G-HSNVVIAADWLSDGEQVITASWDRVANLFDVETG 303 (361)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 303 (361)
.++..+. + |...|.+++|+|+|++|++++.|++|++||++.+
T Consensus 229 --------------------~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 229 --------------------VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp --------------------CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred --------------------cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 2566776 5 9999999999999999999999999999999765
No 123
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.83 E-value=7.4e-20 Score=168.10 Aligned_cols=155 Identities=12% Similarity=0.053 Sum_probs=122.2
Q ss_pred ccCCCeEEEEEcCCCCEEE----EEeCCCcEEEEeCCCC--------e---EEEEEeCCCCCeEEEEEecC-CCEEEEEE
Q psy8430 159 GHRDGVWDVAVRPGQPVLG----SASADRTVRLWSTQTG--------K---CVLQYSGHSGSVNSVRFLPN-KDLVLSAS 222 (361)
Q Consensus 159 ~h~~~V~~l~~~~~~~~l~----s~s~d~~i~~wd~~~~--------~---~~~~~~~h~~~v~~v~~~~~-~~~l~s~~ 222 (361)
.|.+.|++++|+|+|++|+ +|+.|++|++||+.++ + .+..+.+|...|.+++|+|+ +.+|++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 3667899999999999999 7889999999998654 2 24556679999999999997 88999999
Q ss_pred CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC
Q psy8430 223 GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET 302 (361)
Q Consensus 223 ~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 302 (361)
.||+|++||++++. ......+|...|.+++|+|+|++|++|+.||.|++||++
T Consensus 170 ~Dg~v~iwD~~~~~--------------------------~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~- 222 (434)
T 2oit_A 170 ADGSIAVLQVTETV--------------------------KVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT- 222 (434)
T ss_dssp TTSCEEEEEESSSE--------------------------EEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-
T ss_pred CCCeEEEEEcCCCc--------------------------ceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-
Confidence 99999999997651 344556788999999999999999999999999999998
Q ss_pred CeEEEEeecCCC-------CCeEEEEEcCCCcc----cCCC------eEEEEcCCCC
Q psy8430 303 GTILQSLTGHDE-------EPHILCVSSYYSKV----SCDL------FQRIQHLDCG 342 (361)
Q Consensus 303 ~~~~~~~~~h~~-------~v~~~~~s~s~~~v----~~dg------~i~iW~~d~~ 342 (361)
++....+..|.. .+.++.+++.+.++ ..|| .+++| |+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~--~l~ 277 (434)
T 2oit_A 223 LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMA--LLP 277 (434)
T ss_dssp CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEE--ECC
T ss_pred CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEE--Eec
Confidence 666666655432 45555555542222 1333 48999 663
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.81 E-value=1.1e-17 Score=151.40 Aligned_cols=173 Identities=12% Similarity=0.129 Sum_probs=131.2
Q ss_pred ccceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC
Q psy8430 136 QTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214 (361)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l-~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~ 214 (361)
..+..+..|.. .+++.+..+.+|.. +.+++|+|+|.++ ++++.|++|++||+.+++.+..+..+. .+.+++|+|+
T Consensus 9 ~~d~~v~v~d~--~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spd 84 (391)
T 1l0q_A 9 SESDNISVIDV--TSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPD 84 (391)
T ss_dssp TTTTEEEEEET--TTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTT
T ss_pred CCCCEEEEEEC--CCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCC
Confidence 33445555554 34566777777754 8999999999976 677799999999999999988888554 9999999999
Q ss_pred CCEEEEE-ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEE-EEEeCC
Q psy8430 215 KDLVLSA-SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV-ITASWD 292 (361)
Q Consensus 215 ~~~l~s~-~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~d 292 (361)
++.++.+ +.|+.|++||+.++. ....+. +...+.+++|+|+++++ ++++.|
T Consensus 85 g~~l~~~~~~~~~v~v~d~~~~~--------------------------~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~ 137 (391)
T 1l0q_A 85 GKQVYVTNMASSTLSVIDTTSNT--------------------------VAGTVK-TGKSPLGLALSPDGKKLYVTNNGD 137 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTE--------------------------EEEEEE-CSSSEEEEEECTTSSEEEEEETTT
T ss_pred CCEEEEEECCCCEEEEEECCCCe--------------------------EEEEEe-CCCCcceEEECCCCCEEEEEeCCC
Confidence 9987554 467999999997652 333343 34578999999999988 678889
Q ss_pred CcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC--c--ccCCCeEEEEcCCCC
Q psy8430 293 RVANLFDVETGTILQSLTGHDEEPHILCVSSYYS--K--VSCDLFQRIQHLDCG 342 (361)
Q Consensus 293 ~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~--~--v~~dg~i~iW~~d~~ 342 (361)
+.|++||+.+++.+..+..+.. +..+.++.... + ...|+.|++| |+.
T Consensus 138 ~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~dg~~l~~~~~~~~~v~~~--d~~ 188 (391)
T 1l0q_A 138 KTVSVINTVTKAVINTVSVGRS-PKGIAVTPDGTKVYVANFDSMSISVI--DTV 188 (391)
T ss_dssp TEEEEEETTTTEEEEEEECCSS-EEEEEECTTSSEEEEEETTTTEEEEE--ETT
T ss_pred CEEEEEECCCCcEEEEEecCCC-cceEEECCCCCEEEEEeCCCCEEEEE--ECC
Confidence 9999999999999988876644 34544443311 1 1289999999 773
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.79 E-value=3.3e-17 Score=148.16 Aligned_cols=174 Identities=14% Similarity=0.105 Sum_probs=132.6
Q ss_pred cceeeeEEeeccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEE-EEEECCCc
Q psy8430 149 LSCYKIRSFSGHRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV-LSASGDKS 226 (361)
Q Consensus 149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l-~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~~~d~~ 226 (361)
.+++.+..+..| ..+.+++|+|+++.| ++++.|+.|++||+.+++.+..+..+ ..+.+++|+|+++.+ ++++.|+.
T Consensus 104 ~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~ 181 (391)
T 1l0q_A 104 TSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMS 181 (391)
T ss_dssp TTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTE
T ss_pred CCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCE
Confidence 344556666655 568999999999977 78888999999999999998888854 567999999999887 57778999
Q ss_pred EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe---CCCcEEEeeCCCC
Q psy8430 227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS---WDRVANLFDVETG 303 (361)
Q Consensus 227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~d~~v~iwd~~~~ 303 (361)
|++||+.++. ....+ .+...+.+++|+|+|+++++++ .++.|++||+.++
T Consensus 182 v~~~d~~~~~--------------------------~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 182 ISVIDTVTNS--------------------------VIDTV-KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp EEEEETTTTE--------------------------EEEEE-ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred EEEEECCCCe--------------------------EEEEE-ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC
Confidence 9999997652 22333 3566889999999999999988 6899999999999
Q ss_pred eEEEEeecCCCCCeEEEEEcCC--Cc--ccCCCeEEEEcCCCCCCCCcceeeeeecccc
Q psy8430 304 TILQSLTGHDEEPHILCVSSYY--SK--VSCDLFQRIQHLDCGTSENPIHSVCVFQDIQ 358 (361)
Q Consensus 304 ~~~~~~~~h~~~v~~~~~s~s~--~~--v~~dg~i~iW~~d~~~~~~~~~~v~~~~~h~ 358 (361)
+.+..+..|.. +.++.+++.. ++ .+.|+.|++| |+.+ ..++..+..|.
T Consensus 235 ~~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~d~~v~v~--d~~~----~~~~~~~~~~~ 286 (391)
T 1l0q_A 235 KITARIPVGPD-PAGIAVTPDGKKVYVALSFXNTVSVI--DTAT----NTITATMAVGK 286 (391)
T ss_dssp EEEEEEECCSS-EEEEEECTTSSEEEEEETTTTEEEEE--ETTT----TEEEEEEECSS
T ss_pred eEEEEEecCCC-ccEEEEccCCCEEEEEcCCCCEEEEE--ECCC----CcEEEEEECCc
Confidence 99998887654 4444444331 11 1389999999 7733 44555665554
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.77 E-value=2.7e-17 Score=150.83 Aligned_cols=156 Identities=9% Similarity=0.071 Sum_probs=125.2
Q ss_pred EeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEE-ECCCcEEEEeccc
Q psy8430 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA-SGDKSVHIWQAVI 234 (361)
Q Consensus 156 ~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-~~d~~i~lwd~~~ 234 (361)
.+.+|.+.|++++|+|++.++++++.|+.|++||+.+++.+..+..|...+.+++|+|+++.++++ +.|+.|++||+.+
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~ 243 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT 243 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC
Confidence 456899999999999999999999999999999999999999999999999999999999987554 4799999999876
Q ss_pred cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe--------CCCcEEEeeCCCCeEE
Q psy8430 235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS--------WDRVANLFDVETGTIL 306 (361)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--------~d~~v~iwd~~~~~~~ 306 (361)
+. ....+. +...+.+++|+|+|+++++++ .|+.|++||+++++.+
T Consensus 244 ~~--------------------------~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~ 296 (433)
T 3bws_A 244 KL--------------------------EIRKTD-KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLI 296 (433)
T ss_dssp TE--------------------------EEEECC-CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEE
T ss_pred Cc--------------------------EEEEec-CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEE
Confidence 52 233333 345689999999999999988 5889999999999887
Q ss_pred EEeecCCCCCeEEEEEcCC--Ccc--cCCCeEEEEcCCC
Q psy8430 307 QSLTGHDEEPHILCVSSYY--SKV--SCDLFQRIQHLDC 341 (361)
Q Consensus 307 ~~~~~h~~~v~~~~~s~s~--~~v--~~dg~i~iW~~d~ 341 (361)
..+. |...+..+.+++.. +++ +.|+.|++| |+
T Consensus 297 ~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~--d~ 332 (433)
T 3bws_A 297 DTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVY--DL 332 (433)
T ss_dssp EEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEE--ET
T ss_pred eecc-CCCCcceEEECCCCCEEEEEecCCCEEEEE--EC
Confidence 7663 33445554444332 111 389999999 66
No 127
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.74 E-value=2.2e-17 Score=151.62 Aligned_cols=162 Identities=10% Similarity=-0.032 Sum_probs=121.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCC----------eEE------EEEeCCCCCeEEEEEecCCCEEE----E
Q psy8430 161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG----------KCV------LQYSGHSGSVNSVRFLPNKDLVL----S 220 (361)
Q Consensus 161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~----------~~~------~~~~~h~~~v~~v~~~~~~~~l~----s 220 (361)
...++.+++++++.++++++.|+ +++|+.... ..+ ..+ .+...|.+++|+|++++|+ +
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEEEEec
Confidence 34688999999999999999998 888875210 011 122 3667899999999999999 7
Q ss_pred EECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEee
Q psy8430 221 ASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD-GEQVITASWDRVANLFD 299 (361)
Q Consensus 221 ~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd 299 (361)
++.|+.|++||+.+....... ..........+.+|...|.+++|+|+ +.+|++++.||+|++||
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~---------------~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD 178 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQ---------------QKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQ 178 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCS---------------SCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred cCCCceEEEEEccccccCCcC---------------CcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEE
Confidence 888999999998754110000 00000123445679999999999997 89999999999999999
Q ss_pred CCCCeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEEcCCC
Q psy8430 300 VETGTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQHLDC 341 (361)
Q Consensus 300 ~~~~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW~~d~ 341 (361)
++++..+....+|...+.++.++..+. ..+.||.|++| |.
T Consensus 179 ~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iw--d~ 221 (434)
T 2oit_A 179 VTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQY--LP 221 (434)
T ss_dssp ESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEE--CT
T ss_pred cCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEE--cc
Confidence 999988777778888898866654422 12489999999 77
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.73 E-value=6.7e-16 Score=141.50 Aligned_cols=173 Identities=9% Similarity=-0.013 Sum_probs=132.1
Q ss_pred cceeeeEEeeccCCCeEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE-----
Q psy8430 149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLG-SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----- 222 (361)
Q Consensus 149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~-s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----- 222 (361)
.+++.+..+..|...+.+++|+|++..++ +++.|+.|++||+.+++.+..+.. ...+.+++|+|+++.+++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~ 277 (433)
T 3bws_A 199 KTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASN 277 (433)
T ss_dssp TTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCT
T ss_pred CCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCc
Confidence 45567788889999999999999999775 455799999999999998888774 45699999999999999888
Q ss_pred ---CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEE-EEEeCCCcEEEe
Q psy8430 223 ---GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV-ITASWDRVANLF 298 (361)
Q Consensus 223 ---~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~d~~v~iw 298 (361)
.|+.|++||+.++. ......|...+.+++|+|+++++ ++++.|+.|++|
T Consensus 278 ~~~~dg~i~~~d~~~~~---------------------------~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~ 330 (433)
T 3bws_A 278 QESGGGRLGIYSMDKEK---------------------------LIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVY 330 (433)
T ss_dssp TCSCCEEEEEEETTTTE---------------------------EEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEE
T ss_pred cccCCCeEEEEECCCCc---------------------------EEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 58899999987652 22223455688899999999765 566889999999
Q ss_pred eCCCCeEEEEeecCCCCCeEEEEEcCC--Ccc----------------cCCCeEEEEcCCCCCCCCcceeeeeecc
Q psy8430 299 DVETGTILQSLTGHDEEPHILCVSSYY--SKV----------------SCDLFQRIQHLDCGTSENPIHSVCVFQD 356 (361)
Q Consensus 299 d~~~~~~~~~~~~h~~~v~~~~~s~s~--~~v----------------~~dg~i~iW~~d~~~~~~~~~~v~~~~~ 356 (361)
|+.+++.+..+. +...+..+.+++.+ +++ +.||.|++| |..+ ...+..+.+
T Consensus 331 d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~--d~~~----~~~~~~~~~ 399 (433)
T 3bws_A 331 DLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVI--DTTT----DTVKEFWEA 399 (433)
T ss_dssp ETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEE--ETTT----TEEEEEEEC
T ss_pred ECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEE--ECCC----CcEEEEecC
Confidence 999999888876 55566665555442 121 126799999 7733 334445544
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.73 E-value=4.2e-16 Score=142.39 Aligned_cols=170 Identities=14% Similarity=0.106 Sum_probs=129.3
Q ss_pred eEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCC---cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC
Q psy8430 140 IVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADR---TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216 (361)
Q Consensus 140 ~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~---~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~ 216 (361)
.+..|..+ +...+.+.+|.+.|.+++|+|+|+.|++++.|+ .|++||+.+++.. .+..|...+.+++|+|+|+
T Consensus 160 ~i~i~d~~---g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~ 235 (415)
T 2hqs_A 160 ELRVSDYD---GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGS 235 (415)
T ss_dssp EEEEEETT---SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSS
T ss_pred eEEEEcCC---CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCC
Confidence 34444443 345678889999999999999999999999885 9999999998875 4667888999999999999
Q ss_pred EEE-EEECCCc--EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC-
Q psy8430 217 LVL-SASGDKS--VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD- 292 (361)
Q Consensus 217 ~l~-s~~~d~~--i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d- 292 (361)
.|+ +++.|+. |.+||+.++ ....+..|...+.+++|+|+|++|++++.+
T Consensus 236 ~la~~~~~~g~~~i~~~d~~~~---------------------------~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~ 288 (415)
T 2hqs_A 236 KLAFALSKTGSLNLYVMDLASG---------------------------QIRQVTDGRSNNTEPTWFPDSQNLAFTSDQA 288 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTC---------------------------CEEECCCCSSCEEEEEECTTSSEEEEEECTT
T ss_pred EEEEEEecCCCceEEEEECCCC---------------------------CEEeCcCCCCcccceEECCCCCEEEEEECCC
Confidence 877 6666665 899998765 335666788899999999999999988864
Q ss_pred C--cEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCCc---ccC---CCeEEEEcCCCCC
Q psy8430 293 R--VANLFDVETGTILQSLTGHDEEPHILCVSSYYSK---VSC---DLFQRIQHLDCGT 343 (361)
Q Consensus 293 ~--~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~~---v~~---dg~i~iW~~d~~~ 343 (361)
+ .|++||+.+++. ..+..+...+..+.+++++.. .+. ++.|++| |+.+
T Consensus 289 g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~--d~~~ 344 (415)
T 2hqs_A 289 GRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQ--DLAT 344 (415)
T ss_dssp SSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEE--ETTT
T ss_pred CCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEE--ECCC
Confidence 4 688889988764 445556666666566655321 123 3689999 6633
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.70 E-value=2.1e-15 Score=137.81 Aligned_cols=168 Identities=13% Similarity=0.055 Sum_probs=124.2
Q ss_pred EEeeccCCCeEEEEEcCCCCEEE-EEeCCCc--EEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC-CC--cEE
Q psy8430 155 RSFSGHRDGVWDVAVRPGQPVLG-SASADRT--VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DK--SVH 228 (361)
Q Consensus 155 ~~l~~h~~~V~~l~~~~~~~~l~-s~s~d~~--i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~--~i~ 228 (361)
..+..|.+.+.+++|+|+|+.|+ +++.|+. |++||+.+++. ..+..|...+.+++|+|+|+.|+.++. ++ .|.
T Consensus 216 ~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~ 294 (415)
T 2hqs_A 216 RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVY 294 (415)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEE
Confidence 35778889999999999999777 6666655 99999988875 566778899999999999999888876 45 577
Q ss_pred EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC---CcEEEeeCCCCeE
Q psy8430 229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---RVANLFDVETGTI 305 (361)
Q Consensus 229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~~ 305 (361)
+||+.++ ....+..+...+.+++|+|+|++|++++.+ ..|++||+.+++.
T Consensus 295 ~~d~~~~---------------------------~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 295 KVNINGG---------------------------APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp EEETTSS---------------------------CCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred EEECCCC---------------------------CEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 7787654 233445567788999999999999988865 5799999999887
Q ss_pred EEEeecCCCCCeEEEEEcCCCc---ccCCC---eEEEEcCCCCCCCCcceeeeeeccccc
Q psy8430 306 LQSLTGHDEEPHILCVSSYYSK---VSCDL---FQRIQHLDCGTSENPIHSVCVFQDIQS 359 (361)
Q Consensus 306 ~~~~~~h~~~v~~~~~s~s~~~---v~~dg---~i~iW~~d~~~~~~~~~~v~~~~~h~~ 359 (361)
. .+..+. .+..+.+++++.. .+.|+ .|++| |+ . ...+..+.+|.+
T Consensus 348 ~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~--d~---~--g~~~~~l~~~~~ 398 (415)
T 2hqs_A 348 Q-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLV--ST---D--GRFKARLPATDG 398 (415)
T ss_dssp E-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEE--ET---T--SCCEEECCCSSS
T ss_pred E-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEE--EC---C--CCcEEEeeCCCC
Confidence 4 455554 6666555554221 12444 78888 65 1 123556677655
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.62 E-value=2.1e-14 Score=123.87 Aligned_cols=158 Identities=13% Similarity=-0.012 Sum_probs=115.9
Q ss_pred EeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CeEEEEEeCC-CCCeEEEEEecCCCEEEEEE--CCCcEEEEe
Q psy8430 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGH-SGSVNSVRFLPNKDLVLSAS--GDKSVHIWQ 231 (361)
Q Consensus 156 ~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~-~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~~--~d~~i~lwd 231 (361)
.+..|.+.|.+++|+|+|++|++++ ++.|.+||+.+ ++.......+ ...|.+++|+|+++.+++++ .++...||.
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~ 114 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYL 114 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEE
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEE
Confidence 4557899999999999999999987 78999999998 8777666655 37889999999999999998 445666665
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEE-EEeCCCcEEEeeC--CCCeEEEE
Q psy8430 232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI-TASWDRVANLFDV--ETGTILQS 308 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~v~iwd~--~~~~~~~~ 308 (361)
+.... .....+.. ...+..++|+|++++++ +++.++.++||++ .++. ...
T Consensus 115 ~~~~~-------------------------~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~ 167 (297)
T 2ojh_A 115 LPSTG-------------------------GTPRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETR 167 (297)
T ss_dssp EETTC-------------------------CCCEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-EEE
T ss_pred EECCC-------------------------CceEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCc-ceE
Confidence 53210 02233333 33488899999999887 7888999999985 3443 456
Q ss_pred eecCCCCCeEEEEEcCCC--c-cc-CCCeEEEEcCCC
Q psy8430 309 LTGHDEEPHILCVSSYYS--K-VS-CDLFQRIQHLDC 341 (361)
Q Consensus 309 ~~~h~~~v~~~~~s~s~~--~-v~-~dg~i~iW~~d~ 341 (361)
+..+...+..+.+++... . .+ .|+.++||+++.
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~ 204 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRV 204 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECC
Confidence 666777777766665532 1 12 589999995443
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.62 E-value=2e-13 Score=128.74 Aligned_cols=189 Identities=10% Similarity=-0.024 Sum_probs=135.3
Q ss_pred eEEeeecCccceeeeEEeeccCCCeEEEEEcC----CCCEEEEEeC-CCcEEEEeCCCCeEEEEEeCC-----------C
Q psy8430 140 IVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP----GQPVLGSASA-DRTVRLWSTQTGKCVLQYSGH-----------S 203 (361)
Q Consensus 140 ~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~----~~~~l~s~s~-d~~i~~wd~~~~~~~~~~~~h-----------~ 203 (361)
.+..|.....+++.+.++.. ...+..++|+| +|+++++++. +++|.+||..+++++..+..+ .
T Consensus 201 ~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~ 279 (543)
T 1nir_A 201 RIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPE 279 (543)
T ss_dssp EEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESC
T ss_pred eEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccC
Confidence 34455543245677888874 45679999999 9999998885 899999999999998888752 2
Q ss_pred CCeEEEEEecCCCE-EEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC
Q psy8430 204 GSVNSVRFLPNKDL-VLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD 282 (361)
Q Consensus 204 ~~v~~v~~~~~~~~-l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 282 (361)
..+..+.++|++.. +++...++.|.+||+.+...+ .+..+ .+...+..+.|+|+
T Consensus 280 ~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l------------------------~~~~i-~~~~~~~~~~~spd 334 (543)
T 1nir_A 280 PRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNL------------------------TVTSI-GAAPFLHDGGWDSS 334 (543)
T ss_dssp CCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSC------------------------EEEEE-ECCSSCCCEEECTT
T ss_pred CceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcc------------------------eeEEe-ccCcCccCceECCC
Confidence 37899999997665 566677899999998654210 11122 35567788999999
Q ss_pred CCEEEEEe-CCCcEEEeeCCCCeEEEEeec----CCCCCeE--------EEEEcCCCcccCCCeEEEEcCCCCCCCC---
Q psy8430 283 GEQVITAS-WDRVANLFDVETGTILQSLTG----HDEEPHI--------LCVSSYYSKVSCDLFQRIQHLDCGTSEN--- 346 (361)
Q Consensus 283 ~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~----h~~~v~~--------~~~s~s~~~v~~dg~i~iW~~d~~~~~~--- 346 (361)
|+++++++ .+++|.+||..+++++.++.. |.+.... +++|++ ..|++|+|| |+.+...
T Consensus 335 g~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~----~~d~~V~v~--d~~~~~~~~~ 408 (543)
T 1nir_A 335 HRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSH----LGDGSISLI--GTDPKNHPQY 408 (543)
T ss_dssp SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEB----SSSSEEEEE--ECCTTTCTTT
T ss_pred CCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEecc----CCCceEEEE--EeCCCCCchh
Confidence 99877655 589999999999999998874 5433322 233331 158999999 5533111
Q ss_pred cceeeeeecccccC
Q psy8430 347 PIHSVCVFQDIQST 360 (361)
Q Consensus 347 ~~~~v~~~~~h~~~ 360 (361)
..+++.++.+|.+.
T Consensus 409 ~~~~v~~l~~~g~~ 422 (543)
T 1nir_A 409 AWKKVAELQGQGGG 422 (543)
T ss_dssp BTSEEEEEECSCSC
T ss_pred cCeEEEEEEcCCCC
Confidence 15788899888653
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.61 E-value=3.6e-13 Score=119.54 Aligned_cols=165 Identities=7% Similarity=-0.005 Sum_probs=124.4
Q ss_pred cceeeeEEeeccCCC---------eEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCE
Q psy8430 149 LSCYKIRSFSGHRDG---------VWDVAVRPGQPVLGSAS--ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 217 (361)
Q Consensus 149 ~~~~~~~~l~~h~~~---------V~~l~~~~~~~~l~s~s--~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~ 217 (361)
.+++.+..+..+.+. +.+++|+|+|+.++.++ .++.|.+||..+++.+..+..+...+.+++|+|+++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKR 198 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTE
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCE
Confidence 455666666655432 78899999999777765 4789999999999988888766777899999999999
Q ss_pred EEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe----CCCCcEEEEEEcCCCCEEEEEeCC-
Q psy8430 218 VLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL----GHSNVVIAADWLSDGEQVITASWD- 292 (361)
Q Consensus 218 l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~s~~~d- 292 (361)
+++++.++.|.+||+.++.. ...+. ++...+..++|+|+|++++.++.+
T Consensus 199 l~~~~~~~~i~~~d~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 252 (353)
T 3vgz_A 199 LYTTNADGELITIDTADNKI--------------------------LSRKKLLDDGKEHFFINISLDTARQRAFITDSKA 252 (353)
T ss_dssp EEEECTTSEEEEEETTTTEE--------------------------EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS
T ss_pred EEEEcCCCeEEEEECCCCeE--------------------------EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC
Confidence 99999999999999876632 22222 245578889999999988777654
Q ss_pred CcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCC--Ccc--cCCCeEEEEcCCCCC
Q psy8430 293 RVANLFDVETGTILQSLTGHDEEPHILCVSSYY--SKV--SCDLFQRIQHLDCGT 343 (361)
Q Consensus 293 ~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~--~~v--~~dg~i~iW~~d~~~ 343 (361)
+.|.+||..+++.+..+..+.. ..+.+++.. +++ ..++.|.+| |..+
T Consensus 253 ~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~--d~~~ 303 (353)
T 3vgz_A 253 AEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVI--DAKS 303 (353)
T ss_dssp SEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEE--ETTT
T ss_pred CEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEE--ECCC
Confidence 8999999999999888875432 223333331 122 268999999 7633
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.60 E-value=7.3e-13 Score=124.88 Aligned_cols=181 Identities=10% Similarity=-0.061 Sum_probs=130.5
Q ss_pred ceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeC--CCCeEEEEEeCCCCCeEEEEEec--
Q psy8430 138 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWST--QTGKCVLQYSGHSGSVNSVRFLP-- 213 (361)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~--~~~~~~~~~~~h~~~v~~v~~~~-- 213 (361)
+..+..|. ..+++++.++..+.. +.+++|+|+|++|++++.|++|.+||+ .+++.+..+. +...+..++|+|
T Consensus 158 d~~V~v~D--~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~ 233 (543)
T 1nir_A 158 AGQIALVD--GDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFK 233 (543)
T ss_dssp GTEEEEEE--TTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCST
T ss_pred CCeEEEEE--CCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCc
Confidence 34444553 456677888884433 899999999999999999999999999 8899888888 567789999999
Q ss_pred --CCCEEEEEEC-CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC----------C-CCcEEEEEE
Q psy8430 214 --NKDLVLSASG-DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG----------H-SNVVIAADW 279 (361)
Q Consensus 214 --~~~~l~s~~~-d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-~~~v~~~~~ 279 (361)
+|+++++++. +++|.+||..+.. ++..+.. | ...+.++.+
T Consensus 234 ~~dg~~l~v~~~~~~~v~v~D~~t~~--------------------------~~~~i~~~g~~~~~~~~~~~~~v~~i~~ 287 (543)
T 1nir_A 234 GYEDRYTIAGAYWPPQFAIMDGETLE--------------------------PKQIVSTRGMTVDTQTYHPEPRVAAIIA 287 (543)
T ss_dssp TCTTTEEEEEEEESSEEEEEETTTCC--------------------------EEEEEECCEECSSSCCEESCCCEEEEEE
T ss_pred CCCCCEEEEEEccCCeEEEEeccccc--------------------------cceeecccCcccCccccccCCceEEEEE
Confidence 9999998884 8999999987653 2333322 2 237899999
Q ss_pred cCCCCE-EEEEeCCCcEEEeeCCCCeEEE--EeecCCCCCeEEEEEcCCC--cc--cCCCeEEEEcCCCCCCCCcceeee
Q psy8430 280 LSDGEQ-VITASWDRVANLFDVETGTILQ--SLTGHDEEPHILCVSSYYS--KV--SCDLFQRIQHLDCGTSENPIHSVC 352 (361)
Q Consensus 280 ~~~~~~-l~s~~~d~~v~iwd~~~~~~~~--~~~~h~~~v~~~~~s~s~~--~v--~~dg~i~iW~~d~~~~~~~~~~v~ 352 (361)
+|++.. +++...++.|.+||+.+++.+. ++. +...+..+.+++++- ++ ..+++|.+| |..+ ..++.
T Consensus 288 s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~--D~~t----g~l~~ 360 (543)
T 1nir_A 288 SHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVI--DSKD----RRLSA 360 (543)
T ss_dssp CSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEE--ETTT----TEEEE
T ss_pred CCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEE--ECCC----CeEEE
Confidence 997665 5667778999999998876544 443 334444444444321 11 168999999 7743 33444
Q ss_pred eec
Q psy8430 353 VFQ 355 (361)
Q Consensus 353 ~~~ 355 (361)
.+.
T Consensus 361 ~i~ 363 (543)
T 1nir_A 361 LVD 363 (543)
T ss_dssp EEE
T ss_pred eec
Confidence 444
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.56 E-value=1.1e-12 Score=115.46 Aligned_cols=173 Identities=13% Similarity=0.105 Sum_probs=117.1
Q ss_pred CeEEEEEcCCCCEEEEEe------------CCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430 163 GVWDVAVRPGQPVLGSAS------------ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230 (361)
Q Consensus 163 ~V~~l~~~~~~~~l~s~s------------~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw 230 (361)
.+.+++|+|+|++|++++ .++.|.+||+.+++.+..+.. ...+.+++|+|+++.++++ ++.|.+|
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEE
Confidence 677899999999888886 679999999999988877774 5678899999999988877 7899999
Q ss_pred eccccccccCCCCCC-CCCCCCCCCCCc------------------------------------eecc--cc-cEEEeCC
Q psy8430 231 QAVINWECLNNDNDS-DLDESKEPDESS------------------------------------ITLR--TP-VKELLGH 270 (361)
Q Consensus 231 d~~~~~~~~~~~~~~-~~~~~~~~~~~~------------------------------------~~~~--~~-~~~~~~~ 270 (361)
|+.++.......... .......++... +... .. ...+..+
T Consensus 160 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 239 (337)
T 1pby_B 160 DPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM 239 (337)
T ss_dssp ETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred ECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCC
Confidence 998776542211110 000000000000 0000 00 1122334
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCCC--cc-cCCCeEEEEcCCCCC
Q psy8430 271 SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS--KV-SCDLFQRIQHLDCGT 343 (361)
Q Consensus 271 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~--~v-~~dg~i~iW~~d~~~ 343 (361)
...+.+++|+|+|++++++ ++.|.+||+.+++.+..+..+. .+.++.+++.+. ++ +.|+.|++| |+.+
T Consensus 240 ~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~i~v~--d~~~ 310 (337)
T 1pby_B 240 DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPH-SYYSVNVSTDGSTVWLGGALGDLAAY--DAET 310 (337)
T ss_dssp SSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSS-CCCEEEECTTSCEEEEESBSSEEEEE--ETTT
T ss_pred CCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCC-ceeeEEECCCCCEEEEEcCCCcEEEE--ECcC
Confidence 4567789999999999988 7999999999999888876543 344544443311 11 379999999 7743
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.55 E-value=1.5e-12 Score=114.95 Aligned_cols=178 Identities=12% Similarity=0.037 Sum_probs=120.0
Q ss_pred ceeEEeeecCc-cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCC-CcEEEEeCC--CCe--EEEEEeCCCCCeEEEEE
Q psy8430 138 SKIVSSFKTSL-LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD-RTVRLWSTQ--TGK--CVLQYSGHSGSVNSVRF 211 (361)
Q Consensus 138 ~~~~~~~~~~~-~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d-~~i~~wd~~--~~~--~~~~~~~h~~~v~~v~~ 211 (361)
+..+..|..+. ...+.+..+ .|...+.+++|+|+|++|++++.+ +.|.+|++. ++. .+..+..+. .+.+++|
T Consensus 14 ~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 91 (343)
T 1ri6_A 14 SQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHIST 91 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEE
T ss_pred CCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEE
Confidence 44555565532 222334433 477889999999999988888887 999999997 554 444555443 8899999
Q ss_pred ecCCCEEEEEEC-CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy8430 212 LPNKDLVLSASG-DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS 290 (361)
Q Consensus 212 ~~~~~~l~s~~~-d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 290 (361)
+|+++.+++++. ++.|.+||+..+. .......+. ....+.+++|+|+|+++++++
T Consensus 92 s~dg~~l~~~~~~~~~i~~~d~~~~~-----------------------~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~ 147 (343)
T 1ri6_A 92 DHQGQFVFVGSYNAGNVSVTRLEDGL-----------------------PVGVVDVVE-GLDGCHSANISPDNRTLWVPA 147 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTE-----------------------EEEEEEEEC-CCTTBCCCEECTTSSEEEEEE
T ss_pred cCCCCEEEEEecCCCeEEEEECCCCc-----------------------ccccccccc-CCCCceEEEECCCCCEEEEec
Confidence 999998877665 8899999984210 011233333 334588899999999988887
Q ss_pred -CCCcEEEeeCCC-CeEEE----EeecC-CCCCeEEEEEcCCC--cc--cCCCeEEEEcCCC
Q psy8430 291 -WDRVANLFDVET-GTILQ----SLTGH-DEEPHILCVSSYYS--KV--SCDLFQRIQHLDC 341 (361)
Q Consensus 291 -~d~~v~iwd~~~-~~~~~----~~~~h-~~~v~~~~~s~s~~--~v--~~dg~i~iW~~d~ 341 (361)
.++.|.+||+.+ ++... .+..+ ...+..+.+++... ++ ..++.|++|+++.
T Consensus 148 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 148 LKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred CCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 899999999987 65432 23333 23444444544422 22 2789999995543
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.55 E-value=1.2e-12 Score=115.21 Aligned_cols=186 Identities=15% Similarity=0.129 Sum_probs=121.6
Q ss_pred ceeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCeE-EEEEeCCCCCeEEEEEecCC
Q psy8430 138 SKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQTGKC-VLQYSGHSGSVNSVRFLPNK 215 (361)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~-d~~i~~wd~~~~~~-~~~~~~h~~~v~~v~~~~~~ 215 (361)
+..+..|... +++.+..+..+...+ +++|+|+|+++++++. ++.|.+||..+++. ...+..+..+..+++|+|++
T Consensus 19 ~~~v~~~d~~--~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg 95 (331)
T 3u4y_A 19 LRRISFFSTD--TLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDD 95 (331)
T ss_dssp GTEEEEEETT--TCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTS
T ss_pred CCeEEEEeCc--ccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCC
Confidence 3444455443 445566666666667 9999999996666655 89999999999887 77777666666669999999
Q ss_pred CEEEEEECCC---cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE-eC
Q psy8430 216 DLVLSASGDK---SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA-SW 291 (361)
Q Consensus 216 ~~l~s~~~d~---~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~ 291 (361)
++++++..++ .|.+||+.++. ....+. .......++|+|+|++++++ ..
T Consensus 96 ~~l~~~~~~~~~~~i~v~d~~~~~--------------------------~~~~~~-~~~~~~~~~~spdg~~l~~~~~~ 148 (331)
T 3u4y_A 96 QFAVTVTGLNHPFNMQSYSFLKNK--------------------------FISTIP-IPYDAVGIAISPNGNGLILIDRS 148 (331)
T ss_dssp SEEEECCCSSSSCEEEEEETTTTE--------------------------EEEEEE-CCTTEEEEEECTTSSCEEEEEET
T ss_pred CEEEEecCCCCcccEEEEECCCCC--------------------------eEEEEE-CCCCccceEECCCCCEEEEEecC
Confidence 9998555443 89999987652 233333 33456899999999866554 55
Q ss_pred CCc-EEEeeCCCCeEE----EEeecCCCCCeEEEEEcCC--Ccc--cCCCeEEEEcCCCCCCCCcceeeeeecc
Q psy8430 292 DRV-ANLFDVETGTIL----QSLTGHDEEPHILCVSSYY--SKV--SCDLFQRIQHLDCGTSENPIHSVCVFQD 356 (361)
Q Consensus 292 d~~-v~iwd~~~~~~~----~~~~~h~~~v~~~~~s~s~--~~v--~~dg~i~iW~~d~~~~~~~~~~v~~~~~ 356 (361)
++. |.+|++.....+ ............+.+++++ +++ ..++.|++| |+.+++. ...+..+..
T Consensus 149 ~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~--d~~~~~~-~~~~~~~~~ 219 (331)
T 3u4y_A 149 SANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGIL--ETQNPEN-ITLLNAVGT 219 (331)
T ss_dssp TTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEE--ECSSTTS-CEEEEEEEC
T ss_pred CCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEE--ECCCCcc-cceeeeccC
Confidence 688 999998753322 1111223334455555442 222 268999999 6644333 222444443
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.54 E-value=1.5e-12 Score=115.53 Aligned_cols=168 Identities=8% Similarity=-0.007 Sum_probs=124.0
Q ss_pred CccceeeeEEeeccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEeCCCCC---------eEEEEEecCCC
Q psy8430 147 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHSGS---------VNSVRFLPNKD 216 (361)
Q Consensus 147 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l-~s~s~d~~i~~wd~~~~~~~~~~~~h~~~---------v~~v~~~~~~~ 216 (361)
+..+++.+..+... ..+..++|+|+|+.+ +++..++.|.+||..+++.+..+..+... +.+++|+|+++
T Consensus 75 d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 153 (353)
T 3vgz_A 75 DPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN 153 (353)
T ss_dssp CTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT
T ss_pred cCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC
Confidence 33455666666543 447889999999955 55566799999999999988888755432 78999999999
Q ss_pred EEEEEE--CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCc
Q psy8430 217 LVLSAS--GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV 294 (361)
Q Consensus 217 ~l~s~~--~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 294 (361)
.++.++ .++.|.+||+.++. ....+..+...+..++|+|+|+++++++.++.
T Consensus 154 ~l~~~~~~~~~~i~~~d~~~~~--------------------------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 207 (353)
T 3vgz_A 154 TVYISGIGKESVIWVVDGGNIK--------------------------LKTAIQNTGKMSTGLALDSEGKRLYTTNADGE 207 (353)
T ss_dssp EEEEEEESSSCEEEEEETTTTE--------------------------EEEEECCCCTTCCCCEEETTTTEEEEECTTSE
T ss_pred EEEEEecCCCceEEEEcCCCCc--------------------------eEEEecCCCCccceEEECCCCCEEEEEcCCCe
Confidence 877766 47889999987652 33444435556788999999999999999999
Q ss_pred EEEeeCCCCeEEEEeec----CCCCCeEEEEEcCC--Ccc--cCCCeEEEEcCCCCC
Q psy8430 295 ANLFDVETGTILQSLTG----HDEEPHILCVSSYY--SKV--SCDLFQRIQHLDCGT 343 (361)
Q Consensus 295 v~iwd~~~~~~~~~~~~----h~~~v~~~~~s~s~--~~v--~~dg~i~iW~~d~~~ 343 (361)
|.+||..+++.+..+.. +...+..+.++++. +++ ..++.|.+| |..+
T Consensus 208 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~--d~~~ 262 (353)
T 3vgz_A 208 LITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVV--DTRN 262 (353)
T ss_dssp EEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEE--ETTT
T ss_pred EEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEE--ECCC
Confidence 99999999999887764 33344445555442 222 256999999 7744
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.54 E-value=1.6e-13 Score=118.34 Aligned_cols=178 Identities=13% Similarity=0.085 Sum_probs=121.6
Q ss_pred eeeeEEeecc-CCCeEEEEEcCCCCEEEEEeC--CCcEEEE--eCCCCeEEEEEeCCCCCeEEEEEecCCCEEE-EEECC
Q psy8430 151 CYKIRSFSGH-RDGVWDVAVRPGQPVLGSASA--DRTVRLW--STQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGD 224 (361)
Q Consensus 151 ~~~~~~l~~h-~~~V~~l~~~~~~~~l~s~s~--d~~i~~w--d~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d 224 (361)
++....+.+| ...|.+++|+|+|.+|++++. ++.+.+| +..++. ...+. +...+.+++|+|+++.++ +++.|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~-~~~~~~~~~~spdg~~l~~~~~~~ 150 (297)
T 2ojh_A 73 PSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMT-KNLPSYWHGWSPDGKSFTYCGIRD 150 (297)
T ss_dssp CSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECC-SSSSEEEEEECTTSSEEEEEEEET
T ss_pred CCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEee-cCCCccceEECCCCCEEEEEECCC
Confidence 3444455555 477899999999999999993 3455555 445544 34444 334589999999999877 78889
Q ss_pred CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCC-C
Q psy8430 225 KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVE-T 302 (361)
Q Consensus 225 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~-~ 302 (361)
+.+.+|++.... .....+..+...+.+++|+|+|++++.++ .++.+++|++. .
T Consensus 151 ~~~~l~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~ 205 (297)
T 2ojh_A 151 QVFDIYSMDIDS-------------------------GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVD 205 (297)
T ss_dssp TEEEEEEEETTT-------------------------CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CceEEEEEECCC-------------------------CcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCC
Confidence 999999864221 13345566778899999999999888766 58999999886 5
Q ss_pred CeEEEEeecCCCCCeEEEEEcCCCc---ccCC-----------CeEEEEcCCCCCCCCcceeeeeeccccc
Q psy8430 303 GTILQSLTGHDEEPHILCVSSYYSK---VSCD-----------LFQRIQHLDCGTSENPIHSVCVFQDIQS 359 (361)
Q Consensus 303 ~~~~~~~~~h~~~v~~~~~s~s~~~---v~~d-----------g~i~iW~~d~~~~~~~~~~v~~~~~h~~ 359 (361)
+..+..+..|...+..+.+++++.. .+.+ +.|.+| |+.++. ...+..+.+|..
T Consensus 206 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~--d~~~~~--~~~~~~~~~~~~ 272 (297)
T 2ojh_A 206 GSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLM--DMDGGN--VETLFDLFGGQG 272 (297)
T ss_dssp SSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEE--ETTSCS--CEEEEEEEESTT
T ss_pred CCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEE--ecCCCC--ceeeeccCCCCc
Confidence 5666777777766666556555321 1233 569999 663322 234455556654
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.54 E-value=1.5e-12 Score=114.62 Aligned_cols=168 Identities=11% Similarity=0.077 Sum_probs=118.3
Q ss_pred ceee-eEEeeccCCCeEEEEEcCCCCEEEEEeCCC---cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEE-EEECC
Q psy8430 150 SCYK-IRSFSGHRDGVWDVAVRPGQPVLGSASADR---TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGD 224 (361)
Q Consensus 150 ~~~~-~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~---~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d 224 (361)
+++. ...+..+..+..+++|+|+|++++++..++ .|.+||+.+++.+..+. +...+.+++|+|+++.++ +...+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~ 149 (331)
T 3u4y_A 71 LEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP-IPYDAVGIAISPNGNGLILIDRSS 149 (331)
T ss_dssp SSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE-CCTTEEEEEECTTSSCEEEEEETT
T ss_pred CCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE-CCCCccceEECCCCCEEEEEecCC
Confidence 3444 667777777776699999999998555553 89999999999888877 455679999999998554 45566
Q ss_pred Cc-EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCC
Q psy8430 225 KS-VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVET 302 (361)
Q Consensus 225 ~~-i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~ 302 (361)
+. +.+|++...... .. .. ............++|+|+|++++.++ .++.|.+||+.+
T Consensus 150 ~~~i~~~~~~~~g~~--------------------~~-~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 207 (331)
T 3u4y_A 150 ANTVRRFKIDADGVL--------------------FD-TG-QEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQN 207 (331)
T ss_dssp TTEEEEEEECTTCCE--------------------EE-EE-EEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CceEEEEEECCCCcE--------------------ee-cC-CccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 88 999998643111 00 01 22224455688999999999765554 688999999999
Q ss_pred CeE---EEEeecCCCCCeEEEEEcCCC--cc--cCCCeEEEEcCCCCC
Q psy8430 303 GTI---LQSLTGHDEEPHILCVSSYYS--KV--SCDLFQRIQHLDCGT 343 (361)
Q Consensus 303 ~~~---~~~~~~h~~~v~~~~~s~s~~--~v--~~dg~i~iW~~d~~~ 343 (361)
++. +..+..+ ..+..+.+++++. ++ ..++.|.+| |..+
T Consensus 208 ~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~--d~~~ 252 (331)
T 3u4y_A 208 PENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNF--NQLS 252 (331)
T ss_dssp TTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEE--ETTT
T ss_pred CcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEE--ECCC
Confidence 988 7777754 3344445554422 22 257889999 7643
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.52 E-value=3.5e-12 Score=112.55 Aligned_cols=175 Identities=6% Similarity=-0.011 Sum_probs=115.3
Q ss_pred eeEEeeecC--ccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCC---CCeEEEEEeCCCCCeEEEEEe
Q psy8430 139 KIVSSFKTS--LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQ---TGKCVLQYSGHSGSVNSVRFL 212 (361)
Q Consensus 139 ~~~~~~~~~--~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~-d~~i~~wd~~---~~~~~~~~~~h~~~v~~v~~~ 212 (361)
..+..|..+ ......+..+..+. .+.+++|+|+|++|++++. ++.|.+||+. .++.+..+. ....+.+++|+
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s 137 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANIS 137 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEEC
T ss_pred CeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEEC
Confidence 455555555 34445566666554 7899999999998776665 8899999994 334455555 34568999999
Q ss_pred cCCCEEEEEE-CCCcEEEEeccc-cccccCCCCCCCCCCCCCCCCCceecccccE--EEeC-CCCcEEEEEEcCCCCEEE
Q psy8430 213 PNKDLVLSAS-GDKSVHIWQAVI-NWECLNNDNDSDLDESKEPDESSITLRTPVK--ELLG-HSNVVIAADWLSDGEQVI 287 (361)
Q Consensus 213 ~~~~~l~s~~-~d~~i~lwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~ 287 (361)
|+++.+++++ .++.|.+||+.+ +.. .... .... ....+..++|+|+|++++
T Consensus 138 ~dg~~l~~~~~~~~~v~~~d~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~pdg~~l~ 193 (343)
T 1ri6_A 138 PDNRTLWVPALKQDRICLFTVSDDGHL------------------------VAQDPAEVTTVEGAGPRHMVFHPNEQYAY 193 (343)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECTTSCE------------------------EEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred CCCCEEEEecCCCCEEEEEEecCCCce------------------------eeecccccccCCCCCcceEEECCCCCEEE
Confidence 9999888877 899999999875 310 0111 2222 345788899999999876
Q ss_pred EEe-CCCcEEEeeCC--CCeE--EEEeec----CC--CCCeEEEEEcCC--Ccc--cCCCeEEEEcCCC
Q psy8430 288 TAS-WDRVANLFDVE--TGTI--LQSLTG----HD--EEPHILCVSSYY--SKV--SCDLFQRIQHLDC 341 (361)
Q Consensus 288 s~~-~d~~v~iwd~~--~~~~--~~~~~~----h~--~~v~~~~~s~s~--~~v--~~dg~i~iW~~d~ 341 (361)
+++ .++.|.+||+. +++. ...+.. +. ..+..+.+++++ +++ ..|+.|++| |+
T Consensus 194 ~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~--d~ 260 (343)
T 1ri6_A 194 CVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVF--SV 260 (343)
T ss_dssp EEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEE--EE
T ss_pred EEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEE--EE
Confidence 655 78999999995 3432 223321 11 122234444331 121 278999999 55
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.51 E-value=2.9e-13 Score=132.63 Aligned_cols=127 Identities=13% Similarity=0.154 Sum_probs=102.1
Q ss_pred CCCeEEEEEcCCCCEEEEEeC-CC-----cEEEEeCCCCeEEEEEeCCCC------------------------CeEEEE
Q psy8430 161 RDGVWDVAVRPGQPVLGSASA-DR-----TVRLWSTQTGKCVLQYSGHSG------------------------SVNSVR 210 (361)
Q Consensus 161 ~~~V~~l~~~~~~~~l~s~s~-d~-----~i~~wd~~~~~~~~~~~~h~~------------------------~v~~v~ 210 (361)
...|.+++|+|||++|++++. |+ +|++||+.+++....+..+.. .|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999999998 88 999999999987777765433 388999
Q ss_pred EecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy8430 211 FLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS 290 (361)
Q Consensus 211 ~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 290 (361)
|+|+|+.|++++. +.|.+||+.++.. .....+..|...+..++|+|+|++|+.++
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~------------------------~~~~~l~~~~~~~~~~~~SPDG~~la~~~ 170 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGK------------------------AAVRQLTHGEGFATDAKLSPKGGFVSFIR 170 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCST------------------------TSCCBCCCSSSCEEEEEECTTSSEEEEEE
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCc------------------------ceEEEcccCCcccccccCCCCCCEEEEEe
Confidence 9999999999886 9999999875410 01223455677899999999999999987
Q ss_pred CCCcEEEeeCCCCeEEEEeecCC
Q psy8430 291 WDRVANLFDVETGTILQSLTGHD 313 (361)
Q Consensus 291 ~d~~v~iwd~~~~~~~~~~~~h~ 313 (361)
++.|++||+.+++.......+.
T Consensus 171 -~~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 171 -GRNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp -TTEEEEEETTTTEEEECCCCCC
T ss_pred -CCcEEEEecCCCCEEEeccCCc
Confidence 4689999999988766554443
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.51 E-value=1.2e-13 Score=134.86 Aligned_cols=168 Identities=9% Similarity=0.003 Sum_probs=118.7
Q ss_pred cCccceeeeEEeeccCC---CeEEEEEcCCCCEEEEEeCC---------CcEEEEeCCCCeEEEEEe---CCCCCeEEEE
Q psy8430 146 TSLLSCYKIRSFSGHRD---GVWDVAVRPGQPVLGSASAD---------RTVRLWSTQTGKCVLQYS---GHSGSVNSVR 210 (361)
Q Consensus 146 ~~~~~~~~~~~l~~h~~---~V~~l~~~~~~~~l~s~s~d---------~~i~~wd~~~~~~~~~~~---~h~~~v~~v~ 210 (361)
++..+++....+.+|.. .|.+++|+|||++|++++.+ +.+.+||+.+++. ..+. +|...+..++
T Consensus 42 ~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~ 120 (723)
T 1xfd_A 42 WNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAG 120 (723)
T ss_dssp BCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCC
T ss_pred EECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccE
Confidence 34445555666677765 49999999999999999875 7788999998875 3333 3445589999
Q ss_pred EecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCC------------------
Q psy8430 211 FLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN------------------ 272 (361)
Q Consensus 211 ~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 272 (361)
|+|+|+.|+.++. +.|.+||+.++.. ......+..
T Consensus 121 ~SPdG~~la~~~~-~~i~~~~~~~g~~--------------------------~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 121 WGPKGQQLIFIFE-NNIYYCAHVGKQA--------------------------IRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp BCSSTTCEEEEET-TEEEEESSSSSCC--------------------------EEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred ECCCCCEEEEEEC-CeEEEEECCCCce--------------------------EEEecCCCCCceECcccceeEEEEecc
Confidence 9999999999886 7899999876532 111112111
Q ss_pred cEEEEEEcCCCCEEEEEeCCC----------------------------------cEEEeeCCCCeEEEEeecC------
Q psy8430 273 VVIAADWLSDGEQVITASWDR----------------------------------VANLFDVETGTILQSLTGH------ 312 (361)
Q Consensus 273 ~v~~~~~~~~~~~l~s~~~d~----------------------------------~v~iwd~~~~~~~~~~~~h------ 312 (361)
.+.+++|+|||++|++++.|+ .|++||+.++++...+..+
T Consensus 174 ~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~ 253 (723)
T 1xfd_A 174 THIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMR 253 (723)
T ss_dssp SSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGS
T ss_pred CcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCc
Confidence 337899999999999987653 7999999998876666654
Q ss_pred CCCCeEEEEEcCCCcc-------cCCCeEEEEcCCCCC
Q psy8430 313 DEEPHILCVSSYYSKV-------SCDLFQRIQHLDCGT 343 (361)
Q Consensus 313 ~~~v~~~~~s~s~~~v-------~~dg~i~iW~~d~~~ 343 (361)
...+..+.+++++..+ ..+..|++| |+.+
T Consensus 254 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~--d~~~ 289 (723)
T 1xfd_A 254 EYYITMVKWATSTKVAVTWLNRAQNVSILTLC--DATT 289 (723)
T ss_dssp SEEEEEEEESSSSEEEEEEEETTSCEEEEEEE--ETTT
T ss_pred cceeEEEEEeCCCeEEEEEEcCCCCeEEEEEE--eCCC
Confidence 3445555555552211 134689999 7644
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.51 E-value=2.8e-13 Score=132.80 Aligned_cols=156 Identities=10% Similarity=0.048 Sum_probs=116.3
Q ss_pred eeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCC----------------eEEEEEecCCC
Q psy8430 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS----------------VNSVRFLPNKD 216 (361)
Q Consensus 153 ~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~----------------v~~v~~~~~~~ 216 (361)
....+..|.+.+.+++|+|||++|+.++. +.|++||+.+++.......+... +.+++|+|+|+
T Consensus 143 ~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~ 221 (741)
T 2ecf_A 143 AVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS 221 (741)
T ss_dssp SCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS
T ss_pred eEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCC
Confidence 34567788899999999999999999874 69999999988776554444332 47899999999
Q ss_pred EEEEEECCC---------------------------------cEEEEeccc-cccccCCCCCCCCCCCCCCCCCceeccc
Q psy8430 217 LVLSASGDK---------------------------------SVHIWQAVI-NWECLNNDNDSDLDESKEPDESSITLRT 262 (361)
Q Consensus 217 ~l~s~~~d~---------------------------------~i~lwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (361)
.|++++.|+ .|.+||+.+ +..
T Consensus 222 ~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~------------------------- 276 (741)
T 2ecf_A 222 AIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQT------------------------- 276 (741)
T ss_dssp CEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCC-------------------------
T ss_pred EEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCce-------------------------
Confidence 999988765 677788765 421
Q ss_pred ccEEE--eCCCCcEEEEEEcCCCCEEEEEeC-----CCcEEEeeCCCCeEEEEeecCCC----CCeE--------EEEEc
Q psy8430 263 PVKEL--LGHSNVVIAADWLSDGEQVITASW-----DRVANLFDVETGTILQSLTGHDE----EPHI--------LCVSS 323 (361)
Q Consensus 263 ~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~-----d~~v~iwd~~~~~~~~~~~~h~~----~v~~--------~~~s~ 323 (361)
.... ..|...+..++| |+|++|++++. +..|++||+.++++...+..+.. .+.. +++++
T Consensus 277 -~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~ 354 (741)
T 2ecf_A 277 -QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSS 354 (741)
T ss_dssp -EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEE
T ss_pred -EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEe
Confidence 1111 147778999999 99999997764 56799999999988877765542 1222 55556
Q ss_pred CCCcccCCCeEEEEcCCC
Q psy8430 324 YYSKVSCDLFQRIQHLDC 341 (361)
Q Consensus 324 s~~~v~~dg~i~iW~~d~ 341 (361)
+ .||.++||.+|.
T Consensus 355 ~-----~~g~~~l~~~~~ 367 (741)
T 2ecf_A 355 E-----RTGFQHLYRIDS 367 (741)
T ss_dssp C-----TTSSCEEEEECS
T ss_pred c-----CCCccEEEEEcC
Confidence 6 899888885564
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.48 E-value=3.8e-13 Score=131.09 Aligned_cols=156 Identities=12% Similarity=0.127 Sum_probs=111.7
Q ss_pred EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-----CeEEEEEeCCCCC--------------eEEEEEecCC
Q psy8430 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-----GKCVLQYSGHSGS--------------VNSVRFLPNK 215 (361)
Q Consensus 155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~-----~~~~~~~~~h~~~--------------v~~v~~~~~~ 215 (361)
..+..+.+.+.+++|+|||+.|+++ .|+.|++||+.+ ++.......+... +.+++|+|+|
T Consensus 114 ~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg 192 (706)
T 2z3z_A 114 TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG 192 (706)
T ss_dssp EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS
T ss_pred EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC
Confidence 3455677889999999999999985 679999999998 7766544444333 4899999999
Q ss_pred CEEEEEE---------------------------------CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceeccc
Q psy8430 216 DLVLSAS---------------------------------GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRT 262 (361)
Q Consensus 216 ~~l~s~~---------------------------------~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (361)
+.|++++ .+..|.+||+.++...
T Consensus 193 ~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~------------------------ 248 (706)
T 2z3z_A 193 SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTV------------------------ 248 (706)
T ss_dssp SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEE------------------------
T ss_pred CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceE------------------------
Confidence 9999987 4467899998765211
Q ss_pred ccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC-----cEEEeeCCCCeEEEEee-c-CCC---CCeE----------EEEE
Q psy8430 263 PVKELLGHSNVVIAADWLSDGEQVITASWDR-----VANLFDVETGTILQSLT-G-HDE---EPHI----------LCVS 322 (361)
Q Consensus 263 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~-~-h~~---~v~~----------~~~s 322 (361)
.+.....|...+.+++|+|+|++|++++.++ .|++||+.+++....+. . +.. .+.. ++++
T Consensus 249 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~ 328 (706)
T 2z3z_A 249 YLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQ 328 (706)
T ss_dssp ECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEE
T ss_pred eeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEE
Confidence 1111124667899999999999999988776 89999999984433332 1 111 1122 4444
Q ss_pred cCCCcccCCCeEEEEcCC
Q psy8430 323 SYYSKVSCDLFQRIQHLD 340 (361)
Q Consensus 323 ~s~~~v~~dg~i~iW~~d 340 (361)
++ .||.++||.+|
T Consensus 329 ~~-----~~g~~~l~~~~ 341 (706)
T 2z3z_A 329 SR-----RDGWNHLYLYD 341 (706)
T ss_dssp EC-----TTSSCEEEEEE
T ss_pred Ec-----cCCccEEEEEE
Confidence 44 78999999554
No 146
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.48 E-value=1.4e-11 Score=109.36 Aligned_cols=193 Identities=10% Similarity=0.035 Sum_probs=123.5
Q ss_pred eeEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCC-CC--eEEEEEeCC---------CCC
Q psy8430 139 KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS-ADRTVRLWSTQ-TG--KCVLQYSGH---------SGS 205 (361)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s-~d~~i~~wd~~-~~--~~~~~~~~h---------~~~ 205 (361)
..+..|.......+.+..+..+...+..++|+|+|++|++++ .+++|.+|++. .+ ..+..+... ...
T Consensus 63 ~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~ 142 (347)
T 3hfq_A 63 GGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSH 142 (347)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCC
T ss_pred ceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCC
Confidence 455566665555667777777888899999999999888888 68999999995 33 333333321 234
Q ss_pred eEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC-CCCcEEEEEEcCCCC
Q psy8430 206 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGE 284 (361)
Q Consensus 206 v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~ 284 (361)
+.+++|+|+++++++...++.|.+|++...... .....+.. ....+..++|+|+|+
T Consensus 143 ~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~-----------------------~~~~~~~~~~g~~p~~~~~spdg~ 199 (347)
T 3hfq_A 143 IHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQL-----------------------SEQSVLTMEAGFGPRHLVFSPDGQ 199 (347)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECTTSCE-----------------------EEEEEEECCTTCCEEEEEECTTSS
T ss_pred ceEEEECCCCcEEEEeCCCCEEEEEEECCCCcE-----------------------EEeeeEEcCCCCCCceEEECCCCC
Confidence 889999999996666667889999998622100 01122222 233677899999999
Q ss_pred EEEE-EeCCCcEEEeeCCC--CeE--EEEeecCCC------CCeEEEEEcCC--Ccc--cCCCeEEEEcCCCCCCCCcce
Q psy8430 285 QVIT-ASWDRVANLFDVET--GTI--LQSLTGHDE------EPHILCVSSYY--SKV--SCDLFQRIQHLDCGTSENPIH 349 (361)
Q Consensus 285 ~l~s-~~~d~~v~iwd~~~--~~~--~~~~~~h~~------~v~~~~~s~s~--~~v--~~dg~i~iW~~d~~~~~~~~~ 349 (361)
++++ +..++.|.+|++.. ++. +..+..... .+..+.+++++ +++ ..++.|.+| |+.. .....
T Consensus 200 ~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~--~~~~-~g~~~ 276 (347)
T 3hfq_A 200 YAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVF--AVTA-DGHLT 276 (347)
T ss_dssp EEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEE--EECG-GGCEE
T ss_pred EEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEE--EECC-CCcEE
Confidence 7666 45678999999873 543 333333221 24445555542 222 268999999 5521 11234
Q ss_pred eeeeeccc
Q psy8430 350 SVCVFQDI 357 (361)
Q Consensus 350 ~v~~~~~h 357 (361)
.+..+..|
T Consensus 277 ~~~~~~~~ 284 (347)
T 3hfq_A 277 LIQQISTE 284 (347)
T ss_dssp EEEEEECS
T ss_pred EeEEEecC
Confidence 45555443
No 147
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.47 E-value=7.7e-12 Score=111.67 Aligned_cols=161 Identities=11% Similarity=0.012 Sum_probs=107.8
Q ss_pred CCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCe-------E------EEEEeCCCCCeEEEEEecCCCEEEEEE-CCCc
Q psy8430 162 DGVWDVAVRPGQPVLGSAS-ADRTVRLWSTQTGK-------C------VLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKS 226 (361)
Q Consensus 162 ~~V~~l~~~~~~~~l~s~s-~d~~i~~wd~~~~~-------~------~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~ 226 (361)
..+.+++|+|+|++++.++ .++.|.+|++.... . ......+...+..++|+|+++++++++ .++.
T Consensus 155 ~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 234 (361)
T 3scy_A 155 PHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGT 234 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCE
T ss_pred CcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCe
Confidence 3468899999999665554 58899999886433 1 111223566788999999999887777 6899
Q ss_pred EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC--CcEEEeeCC--C
Q psy8430 227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD--RVANLFDVE--T 302 (361)
Q Consensus 227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--~~v~iwd~~--~ 302 (361)
|.+|++.++... ..........+......++|+|+|++|+++..+ +.|.+|++. +
T Consensus 235 v~v~~~~~g~~~---------------------~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~ 293 (361)
T 3scy_A 235 VIAFRYADGMLD---------------------EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN 293 (361)
T ss_dssp EEEEEEETTEEE---------------------EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT
T ss_pred EEEEEecCCceE---------------------EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC
Confidence 999998754210 000111122334557899999999999777665 889999985 4
Q ss_pred Ce--EEEEeecCCCCCeEEEEEcCC--Cccc--CCCeEEEEcCCCCCC
Q psy8430 303 GT--ILQSLTGHDEEPHILCVSSYY--SKVS--CDLFQRIQHLDCGTS 344 (361)
Q Consensus 303 ~~--~~~~~~~h~~~v~~~~~s~s~--~~v~--~dg~i~iW~~d~~~~ 344 (361)
++ .+..+.. ...+..+.+++++ ++++ .++.|.+|++|..++
T Consensus 294 g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g 340 (361)
T 3scy_A 294 GTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATG 340 (361)
T ss_dssp CCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTC
T ss_pred CcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCC
Confidence 54 4445554 4455566666542 2332 579999986677444
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.45 E-value=1.1e-11 Score=110.12 Aligned_cols=177 Identities=11% Similarity=0.045 Sum_probs=114.9
Q ss_pred EEeeecCccceeeeE-EeeccCCCeEEEEEcCCCCEEEEEeC---CCcEEEEeCCCCe--EEEEEeCCCCCeEEEEEecC
Q psy8430 141 VSSFKTSLLSCYKIR-SFSGHRDGVWDVAVRPGQPVLGSASA---DRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPN 214 (361)
Q Consensus 141 ~~~~~~~~~~~~~~~-~l~~h~~~V~~l~~~~~~~~l~s~s~---d~~i~~wd~~~~~--~~~~~~~h~~~v~~v~~~~~ 214 (361)
+..|..+..++++.. ....+...+..++|+|+|+ |++++. ++.|.+|++.++. .+..+..+...+..++|+|+
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spd 96 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEA 96 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETT
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCC
Confidence 344444444433322 2334567788899999998 555544 6899999997775 44455557888999999999
Q ss_pred CCEEEEEE-CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC---------CCCcEEEEEEcCCCC
Q psy8430 215 KDLVLSAS-GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG---------HSNVVIAADWLSDGE 284 (361)
Q Consensus 215 ~~~l~s~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~ 284 (361)
+++|++++ .++.+.+|++...... ..+..+.. +...+.+++|+|+|+
T Consensus 97 g~~l~~~~~~~~~v~v~~~~~~g~~-----------------------~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~ 153 (347)
T 3hfq_A 97 RQLVYSANYHKGTAEVMKIAADGAL-----------------------TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR 153 (347)
T ss_dssp TTEEEEEETTTTEEEEEEECTTSCE-----------------------EEEEEEECCCCCSSTTCSSCCEEEEEECTTSC
T ss_pred CCEEEEEeCCCCEEEEEEeCCCCCe-----------------------eecceeecCCCCCCccccCCCceEEEECCCCc
Confidence 99988888 6789999998532110 01112211 234588999999999
Q ss_pred EEEEEeCCCcEEEeeCC-CCeEEE--EeecCCC-CCeEEEEEcCC--Ccc--cCCCeEEEEcCCC
Q psy8430 285 QVITASWDRVANLFDVE-TGTILQ--SLTGHDE-EPHILCVSSYY--SKV--SCDLFQRIQHLDC 341 (361)
Q Consensus 285 ~l~s~~~d~~v~iwd~~-~~~~~~--~~~~h~~-~v~~~~~s~s~--~~v--~~dg~i~iW~~d~ 341 (361)
++++...++.|.+||+. +++... .+..+.+ .+..+.+++++ +++ ..++.|++|+++.
T Consensus 154 l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 154 LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 66666678899999998 554332 2233222 33444555442 222 2689999995443
No 149
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.44 E-value=6.6e-12 Score=110.43 Aligned_cols=134 Identities=13% Similarity=0.136 Sum_probs=99.0
Q ss_pred ceeeeEEeec-cCC-CeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEeCC-----CCCeEEEEEecCCCEEEEE
Q psy8430 150 SCYKIRSFSG-HRD-GVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGH-----SGSVNSVRFLPNKDLVLSA 221 (361)
Q Consensus 150 ~~~~~~~l~~-h~~-~V~~l~~~~~~~~l-~s~s~d~~i~~wd~~~~~~~~~~~~h-----~~~v~~v~~~~~~~~l~s~ 221 (361)
+++.+..+.. +.. .+.+++|+|+|+.+ ++++.++.|.+||+.+++.+..+... ...+.+++|+|+++.++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 99 (337)
T 1pby_B 20 KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIY 99 (337)
T ss_dssp TTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEE
T ss_pred CCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEE
Confidence 3455555553 222 47899999999765 55666889999999999888777632 1267889999999998888
Q ss_pred E------------CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy8430 222 S------------GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA 289 (361)
Q Consensus 222 ~------------~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 289 (361)
+ .++.|.+||+.++. ....+.. ...+..++|+|+|++++++
T Consensus 100 ~~~~~~~~~~~~~~~~~i~v~d~~~~~--------------------------~~~~~~~-~~~~~~~~~s~dg~~l~~~ 152 (337)
T 1pby_B 100 ESPVRLELTHFEVQPTRVALYDAETLS--------------------------RRKAFEA-PRQITMLAWARDGSKLYGL 152 (337)
T ss_dssp EEEEEECSSCEEECCCEEEEEETTTTE--------------------------EEEEEEC-CSSCCCEEECTTSSCEEEE
T ss_pred ecccccccccccccCceEEEEECCCCc--------------------------EEEEEeC-CCCcceeEECCCCCEEEEe
Confidence 6 67999999987552 2233332 3456778899999988888
Q ss_pred eCCCcEEEeeCCCCeEEEEeecC
Q psy8430 290 SWDRVANLFDVETGTILQSLTGH 312 (361)
Q Consensus 290 ~~d~~v~iwd~~~~~~~~~~~~h 312 (361)
++.|++||+.+++.+..+..+
T Consensus 153 --~~~i~~~d~~~~~~~~~~~~~ 173 (337)
T 1pby_B 153 --GRDLHVMDPEAGTLVEDKPIQ 173 (337)
T ss_dssp --SSSEEEEETTTTEEEEEECST
T ss_pred --CCeEEEEECCCCcEeeeeecc
Confidence 688999999998887766543
No 150
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.42 E-value=2.6e-13 Score=132.52 Aligned_cols=128 Identities=12% Similarity=0.043 Sum_probs=100.4
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC---CeEEEEEecCCCEEEEEECC---------CcEEE
Q psy8430 162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG---SVNSVRFLPNKDLVLSASGD---------KSVHI 229 (361)
Q Consensus 162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~---~v~~v~~~~~~~~l~s~~~d---------~~i~l 229 (361)
..+.+++|+|||+++++ +.||+|++||+.+++....+.+|.. .|.+++|+|+|++|++++.+ +.+.+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 34678899999997766 7899999999999988888877665 49999999999999998875 77889
Q ss_pred EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEe
Q psy8430 230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 309 (361)
Q Consensus 230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 309 (361)
||+.++... .+....+|...+..++|||+|++|+.++. +.|++||+.+++.....
T Consensus 96 ~d~~~~~~~------------------------~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 96 SKIPHGDPQ------------------------SLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp EESSSCCCE------------------------ECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEE
T ss_pred EECCCCceE------------------------eccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEe
Confidence 999766210 11112234555888999999999999986 79999999998877666
Q ss_pred ecCCCC
Q psy8430 310 TGHDEE 315 (361)
Q Consensus 310 ~~h~~~ 315 (361)
..+...
T Consensus 151 ~~~~~~ 156 (723)
T 1xfd_A 151 STGKEG 156 (723)
T ss_dssp CCCBTT
T ss_pred cCCCCC
Confidence 554443
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.42 E-value=1.7e-12 Score=132.08 Aligned_cols=150 Identities=9% Similarity=-0.071 Sum_probs=122.2
Q ss_pred cCCCeEEEEEc-CCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC-CeEEEEEecCCCEEEEEECCCcEE-EEeccccc
Q psy8430 160 HRDGVWDVAVR-PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG-SVNSVRFLPNKDLVLSASGDKSVH-IWQAVINW 236 (361)
Q Consensus 160 h~~~V~~l~~~-~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~-~v~~v~~~~~~~~l~s~~~d~~i~-lwd~~~~~ 236 (361)
|.+.|.+++|+ |+|..|++++ ++.|.+|++..+... .+..|.. .+.+++|+ +|+.++.++.++.+. +||+..+
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~- 369 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTG- 369 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTC-
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCC-
Confidence 45579999999 9999999888 789999999877654 4566777 89999999 999999999888888 8887654
Q ss_pred cccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCC
Q psy8430 237 ECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEP 316 (361)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v 316 (361)
....+.+|...+..++|+|+|++|++++.++.|++||+.+++....+.+|...+
T Consensus 370 --------------------------~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v 423 (1045)
T 1k32_A 370 --------------------------KAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMI 423 (1045)
T ss_dssp --------------------------CEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCC
T ss_pred --------------------------CceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCc
Confidence 223344677889999999999999999999999999999999888887888888
Q ss_pred eEEEEEcCCCc---ccCC----------CeEEEEcCCC
Q psy8430 317 HILCVSSYYSK---VSCD----------LFQRIQHLDC 341 (361)
Q Consensus 317 ~~~~~s~s~~~---v~~d----------g~i~iW~~d~ 341 (361)
..+.+++++.. .+.+ +.|++| |+
T Consensus 424 ~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~--d~ 459 (1045)
T 1k32_A 424 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVY--DM 459 (1045)
T ss_dssp CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEE--ET
T ss_pred cceEECCCCCeEEEEecCccccccCCCCCeEEEE--EC
Confidence 77666665332 1232 599999 66
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.41 E-value=2e-11 Score=108.01 Aligned_cols=184 Identities=9% Similarity=0.028 Sum_probs=114.7
Q ss_pred ceeeeEEeecc------CCCeEEEEEcCCCCEEEEEeCC------------CcEEEEeCCCC---eEEEEEeCCCCCeEE
Q psy8430 150 SCYKIRSFSGH------RDGVWDVAVRPGQPVLGSASAD------------RTVRLWSTQTG---KCVLQYSGHSGSVNS 208 (361)
Q Consensus 150 ~~~~~~~l~~h------~~~V~~l~~~~~~~~l~s~s~d------------~~i~~wd~~~~---~~~~~~~~h~~~v~~ 208 (361)
+++.+..+..+ ...+.+++|+|+|++|++++.+ +.|.+||+.++ +.+..+. +...+.+
T Consensus 74 t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~ 152 (349)
T 1jmx_B 74 TCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYL 152 (349)
T ss_dssp TTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCC
T ss_pred CCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccc
Confidence 34555555432 2337899999999999998865 89999999874 3334444 4456889
Q ss_pred EEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCC-CC---------CCCCCCCCc-eec-----------------
Q psy8430 209 VRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSD-LD---------ESKEPDESS-ITL----------------- 260 (361)
Q Consensus 209 v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~-~~---------~~~~~~~~~-~~~----------------- 260 (361)
++|+|+++ ++.++ +.|.+||+.++........... .. .+....... ...
T Consensus 153 ~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 229 (349)
T 1jmx_B 153 MRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATA 229 (349)
T ss_dssp EEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCC
T ss_pred eeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccc
Confidence 99999999 55543 3499999987755432111100 00 000000000 000
Q ss_pred --------------ccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCC
Q psy8430 261 --------------RTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYY 325 (361)
Q Consensus 261 --------------~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~ 325 (361)
.-....+..+...+.+++|+| +|++++++ ++.|.+||+.+++.+..+.... .+..+.+++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg 306 (349)
T 1jmx_B 230 DLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDH-TYYCVAFDKKG 306 (349)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSS-CCCEEEECSSS
T ss_pred ccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCC-CccceEECCCC
Confidence 000011112344678899999 99999988 8899999999999888876433 34455555442
Q ss_pred --Ccc-cCCCeEEEEcCCCC
Q psy8430 326 --SKV-SCDLFQRIQHLDCG 342 (361)
Q Consensus 326 --~~v-~~dg~i~iW~~d~~ 342 (361)
+++ +.++.|++| |..
T Consensus 307 ~~l~~~~~~~~v~v~--d~~ 324 (349)
T 1jmx_B 307 DKLYLGGTFNDLAVF--NPD 324 (349)
T ss_dssp SCEEEESBSSEEEEE--ETT
T ss_pred CEEEEecCCCeEEEE--ecc
Confidence 222 378999999 773
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.40 E-value=2e-11 Score=107.91 Aligned_cols=145 Identities=16% Similarity=0.069 Sum_probs=103.1
Q ss_pred eeEEeeecCccceeeeEEeeccC-CCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEeCCC------CCeEEEE
Q psy8430 139 KIVSSFKTSLLSCYKIRSFSGHR-DGVWDVAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHS------GSVNSVR 210 (361)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~l~~h~-~~V~~l~~~~~~~~l-~s~s~d~~i~~wd~~~~~~~~~~~~h~------~~v~~v~ 210 (361)
..+..|.. .+++.+..+..+. ..+..++|+|+|+.+ ++++.++.|.+||+.+++.+..+.... ..+.+++
T Consensus 21 ~~v~~~d~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~ 98 (349)
T 1jmx_B 21 NNLHVVDV--ASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFA 98 (349)
T ss_dssp TEEEEEET--TTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEE
T ss_pred CeEEEEEC--CCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceE
Confidence 33444443 3445566665443 257899999999855 455678999999999998887776332 3378999
Q ss_pred EecCCCEEEEEECC------------CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEE
Q psy8430 211 FLPNKDLVLSASGD------------KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAAD 278 (361)
Q Consensus 211 ~~~~~~~l~s~~~d------------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 278 (361)
|+|+++++++++.+ +.|.+||+.++... ........ ...+.+++
T Consensus 99 ~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-----------------------~~~~~~~~-~~~~~~~~ 154 (349)
T 1jmx_B 99 ISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA-----------------------KPVRTFPM-PRQVYLMR 154 (349)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB-----------------------CCSEEEEC-CSSCCCEE
T ss_pred ECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccc-----------------------ceeeeccC-CCccccee
Confidence 99999999988865 89999999765221 12233333 33578899
Q ss_pred EcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecC
Q psy8430 279 WLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312 (361)
Q Consensus 279 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h 312 (361)
|+|+|+ +++++. .|.+||+.+++.+..+..+
T Consensus 155 ~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~ 185 (349)
T 1jmx_B 155 AADDGS-LYVAGP--DIYKMDVKTGKYTVALPLR 185 (349)
T ss_dssp ECTTSC-EEEESS--SEEEECTTTCCEEEEECST
T ss_pred ECCCCc-EEEccC--cEEEEeCCCCceecccccc
Confidence 999999 666544 4999999999888777543
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.40 E-value=3.7e-12 Score=129.52 Aligned_cols=154 Identities=8% Similarity=0.019 Sum_probs=123.1
Q ss_pred EEeeccCC-CeEEEEEcCCCCEEEEEeCCCcEE-EEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430 155 RSFSGHRD-GVWDVAVRPGQPVLGSASADRTVR-LWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA 232 (361)
Q Consensus 155 ~~l~~h~~-~V~~l~~~~~~~~l~s~s~d~~i~-~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~ 232 (361)
..+..|.+ .+.+++|+ +|..|+.++.++.+. +|++.+++.. .+.+|...+.+++|+|+|+.|++++.++.|++||+
T Consensus 330 ~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~ 407 (1045)
T 1k32_A 330 LKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDL 407 (1045)
T ss_dssp EECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEEC
Confidence 34667877 89999999 999999999988898 9999877654 34478889999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC----------cEEEeeCCC
Q psy8430 233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR----------VANLFDVET 302 (361)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~----------~v~iwd~~~ 302 (361)
.++. ......+|...+.+++|+|+|++|++++.++ .|++||+.+
T Consensus 408 ~tg~--------------------------~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 408 ETGK--------------------------PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp TTCC--------------------------EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred CCCc--------------------------eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 7652 3334447888999999999999999887654 899999998
Q ss_pred CeEEEEeecCCCCCeEEEEEcCCC---cccCCCeEEEE
Q psy8430 303 GTILQSLTGHDEEPHILCVSSYYS---KVSCDLFQRIQ 337 (361)
Q Consensus 303 ~~~~~~~~~h~~~v~~~~~s~s~~---~v~~dg~i~iW 337 (361)
++ +..+..|...+..+.+++++. +.+.++..++|
T Consensus 462 g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~ 498 (1045)
T 1k32_A 462 RK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSP 498 (1045)
T ss_dssp TE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEE
T ss_pred Cc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCc
Confidence 87 667777777666665665522 22356666777
No 155
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.39 E-value=1.9e-12 Score=123.35 Aligned_cols=139 Identities=12% Similarity=-0.067 Sum_probs=106.8
Q ss_pred eEEEEEcCCCC--EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECC----CcEEEEecccccc
Q psy8430 164 VWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD----KSVHIWQAVINWE 237 (361)
Q Consensus 164 V~~l~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d----~~i~lwd~~~~~~ 237 (361)
+...+|+|+|+ .+++++.| .+.+||+.+++.......+. .+++|+|+|+.+++++.| +.|.+||+.++
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g-- 185 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATED-RVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSG-- 185 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSS-CEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTC--
T ss_pred ceeeeeCCCCCeEEEEecCCC-CceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCC--
Confidence 44567888775 44444444 55599999887665554333 889999999999988877 78999998765
Q ss_pred ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC--cEEEeeCCCCeEEEEeecCCCC
Q psy8430 238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR--VANLFDVETGTILQSLTGHDEE 315 (361)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~--~v~iwd~~~~~~~~~~~~h~~~ 315 (361)
....+..|...+..++|+|||++|+++..++ .|++||+.+++.. .+.+|...
T Consensus 186 -------------------------~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~ 239 (582)
T 3o4h_A 186 -------------------------GLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKD 239 (582)
T ss_dssp -------------------------CCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSH
T ss_pred -------------------------CceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcC
Confidence 3456778888999999999999999888888 8999999999887 66666554
Q ss_pred CeE----------------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430 316 PHI----------------LCVSSYYSKVSCDLFQRIQHLDC 341 (361)
Q Consensus 316 v~~----------------~~~s~s~~~v~~dg~i~iW~~d~ 341 (361)
+.. ++++++ .||.++|| ++
T Consensus 240 ~~~~~~~~~~~~~~spdg~~~~~~~-----~~g~~~l~--~~ 274 (582)
T 3o4h_A 240 FSSYRPTAITWLGYLPDGRLAVVAR-----REGRSAVF--ID 274 (582)
T ss_dssp HHHHCCSEEEEEEECTTSCEEEEEE-----ETTEEEEE--ET
T ss_pred hhhhhhccccceeEcCCCcEEEEEE-----cCCcEEEE--EE
Confidence 432 445555 89999999 55
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.37 E-value=6.1e-13 Score=129.93 Aligned_cols=156 Identities=12% Similarity=0.046 Sum_probs=104.9
Q ss_pred ceeeeEEeeccCC---CeEEEEEcCCCCEEEEEeC---------CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCE
Q psy8430 150 SCYKIRSFSGHRD---GVWDVAVRPGQPVLGSASA---------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 217 (361)
Q Consensus 150 ~~~~~~~l~~h~~---~V~~l~~~~~~~~l~s~s~---------d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~ 217 (361)
+++....+.+|.. .|.+++|+|||++|++++. |++|++||+.+++.+.... ....+.+++|+|+|+.
T Consensus 45 ~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~ 123 (719)
T 1z68_A 45 TGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-LPRPIQYLCWSPVGSK 123 (719)
T ss_dssp SCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-CCSSBCCEEECSSTTC
T ss_pred CCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee-cCcccccceECCCCCE
Confidence 3444455555544 4899999999999998876 7899999999887621111 2356889999999999
Q ss_pred EEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcE---------EEEEEcCCCCEEEE
Q psy8430 218 VLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVV---------IAADWLSDGEQVIT 288 (361)
Q Consensus 218 l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---------~~~~~~~~~~~l~s 288 (361)
|+.+. |+.|++|++.++....... .......+.++...| .+++|+|||++|++
T Consensus 124 la~~~-~~~i~~~~~~~g~~~~l~~-----------------~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~ 185 (719)
T 1z68_A 124 LAYVY-QNNIYLKQRPGDPPFQITF-----------------NGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAY 185 (719)
T ss_dssp EEEEE-TTEEEEESSTTSCCEECCC-----------------CCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEE
T ss_pred EEEEE-CCeEEEEeCCCCCcEEEec-----------------CCCcCCeEcccccceeeeecccCcccEEECCCCCEEEE
Confidence 99886 7899999997664321100 000111223333322 58999999999999
Q ss_pred EeCCC----------------------------------cEEEeeCCCCeEE--------EEeecCCCCCeEEEEEcC
Q psy8430 289 ASWDR----------------------------------VANLFDVETGTIL--------QSLTGHDEEPHILCVSSY 324 (361)
Q Consensus 289 ~~~d~----------------------------------~v~iwd~~~~~~~--------~~~~~h~~~v~~~~~s~s 324 (361)
++.|. .|++||+.+++.. ..+.+|...+..+.++++
T Consensus 186 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD 263 (719)
T 1z68_A 186 AEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD 263 (719)
T ss_dssp EEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS
T ss_pred EEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCC
Confidence 88652 7889999988753 112345555666555554
No 157
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.34 E-value=1.7e-11 Score=119.50 Aligned_cols=137 Identities=14% Similarity=0.155 Sum_probs=102.3
Q ss_pred eEEEEEcCCCCEEEEEe---------------------------------CCCcEEEEeCCCCeEEEEEe--CCCCCeEE
Q psy8430 164 VWDVAVRPGQPVLGSAS---------------------------------ADRTVRLWSTQTGKCVLQYS--GHSGSVNS 208 (361)
Q Consensus 164 V~~l~~~~~~~~l~s~s---------------------------------~d~~i~~wd~~~~~~~~~~~--~h~~~v~~ 208 (361)
+.++.|+|||++|++++ .+..|.+||+.+++...... .|...+.+
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence 48899999999999998 45689999999887654442 46778999
Q ss_pred EEEecCCCEEEEEECCC-----cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCC---CcEEEEEEc
Q psy8430 209 VRFLPNKDLVLSASGDK-----SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHS---NVVIAADWL 280 (361)
Q Consensus 209 v~~~~~~~~l~s~~~d~-----~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~ 280 (361)
++|+|+|+.|++++.|+ .|.+||+.++... ..+.. ..+. ..+..++|+
T Consensus 263 ~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~-----------------------~~~~~-~~~~~~~~~~~~~~~s 318 (706)
T 2z3z_A 263 LSWSPDENILYVAEVNRAQNECKVNAYDAETGRFV-----------------------RTLFV-ETDKHYVEPLHPLTFL 318 (706)
T ss_dssp EEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEE-----------------------EEEEE-EECSSCCCCCSCCEEC
T ss_pred EEEECCCCEEEEEEeCCCCCeeEEEEEECCCCcee-----------------------eEEEE-ccCCCeECccCCceee
Confidence 99999999999887775 8999998765211 01111 1122 234568999
Q ss_pred C--CCCEEEEEeCCCcEEEeeCC-CCeEEEEeecCCCCCeE-EEEEcC
Q psy8430 281 S--DGEQVITASWDRVANLFDVE-TGTILQSLTGHDEEPHI-LCVSSY 324 (361)
Q Consensus 281 ~--~~~~l~s~~~d~~v~iwd~~-~~~~~~~~~~h~~~v~~-~~~s~s 324 (361)
| +|+++++++.|+.++||++. ++..+..+..|...+.. +.+++.
T Consensus 319 p~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spd 366 (706)
T 2z3z_A 319 PGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPK 366 (706)
T ss_dssp TTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTT
T ss_pred cCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCC
Confidence 9 99999999999999999876 67778888877766654 344443
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.34 E-value=1.1e-11 Score=117.95 Aligned_cols=113 Identities=12% Similarity=0.084 Sum_probs=93.7
Q ss_pred EEEEEcCCCCEEEEEeCC----CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCC--cEEEEeccccccc
Q psy8430 165 WDVAVRPGQPVLGSASAD----RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK--SVHIWQAVINWEC 238 (361)
Q Consensus 165 ~~l~~~~~~~~l~s~s~d----~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~--~i~lwd~~~~~~~ 238 (361)
.+++|+|||++|++++.| +.|++||+.+++.. .+..|.+.+..++|+|+|+.|+++..++ .|.+||+.++..
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~- 230 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV- 230 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE-
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE-
Confidence 789999999999988887 78999999888754 6677889999999999999999888898 899999876521
Q ss_pred cCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEE--------EcCCCCEEEEEeCCCcEEEeeCCCCeEEE
Q psy8430 239 LNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAAD--------WLSDGEQVITASWDRVANLFDVETGTILQ 307 (361)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 307 (361)
. .+.+|...+..++ |+|+|..+++++.|+.+++|++ |+...
T Consensus 231 -------------------------~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~ 279 (582)
T 3o4h_A 231 -------------------------E-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE 279 (582)
T ss_dssp -------------------------E-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC
T ss_pred -------------------------E-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec
Confidence 2 3445555555555 9999999999999999999999 76654
No 159
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.28 E-value=2.9e-11 Score=116.95 Aligned_cols=158 Identities=15% Similarity=0.076 Sum_probs=112.0
Q ss_pred eEEeec-----cCCCeEEEEEcCCCCEEEEEeCC----------CcEEEEeCCC------CeEEEEEe-CCCCCeEEEEE
Q psy8430 154 IRSFSG-----HRDGVWDVAVRPGQPVLGSASAD----------RTVRLWSTQT------GKCVLQYS-GHSGSVNSVRF 211 (361)
Q Consensus 154 ~~~l~~-----h~~~V~~l~~~~~~~~l~s~s~d----------~~i~~wd~~~------~~~~~~~~-~h~~~v~~v~~ 211 (361)
.+.+.. |...+.+++|+|||+.|++++.| ..|.+||+.+ +... .+. .+...+..++|
T Consensus 117 ~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~ 195 (662)
T 3azo_A 117 PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRL 195 (662)
T ss_dssp CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEE
T ss_pred CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceE
Confidence 445555 67789999999999999998877 5899999987 5543 444 56678889999
Q ss_pred ecCCCEEEEEECC--------CcEEEEecc-ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC
Q psy8430 212 LPNKDLVLSASGD--------KSVHIWQAV-INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD 282 (361)
Q Consensus 212 ~~~~~~l~s~~~d--------~~i~lwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 282 (361)
+|+|+.|+.++.+ ..|.+||+. ++.. ........+|...+..+.|+|+
T Consensus 196 SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~-----------------------~~~~~l~~~~~~~~~~~~~spd 252 (662)
T 3azo_A 196 SPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRF-----------------------ADTRTLLGGPEEAIAQAEWAPD 252 (662)
T ss_dssp CTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCE-----------------------EEEEEEEEETTBCEEEEEECTT
T ss_pred CCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcc-----------------------cccEEeCCCCCceEcceEECCC
Confidence 9999999887755 379999986 2300 0122233345788999999999
Q ss_pred CCEEEEEeCCC--cEEEeeCCCCeEEEEeecCCCC--------CeE--------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430 283 GEQVITASWDR--VANLFDVETGTILQSLTGHDEE--------PHI--------LCVSSYYSKVSCDLFQRIQHLDC 341 (361)
Q Consensus 283 ~~~l~s~~~d~--~v~iwd~~~~~~~~~~~~h~~~--------v~~--------~~~s~s~~~v~~dg~i~iW~~d~ 341 (361)
|+++++++.++ .|.+||+.+++.......+... +.. ++++++ . +.++||.+|.
T Consensus 253 g~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~-----~-~~~~l~~~d~ 323 (662)
T 3azo_A 253 GSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG-----K-GAAVLGILDP 323 (662)
T ss_dssp SCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB-----S-SSCEEEEEET
T ss_pred CeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEE-----c-CccEEEEEEC
Confidence 99888888888 5667777677765444333221 112 455555 7 8999995555
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.28 E-value=6.3e-10 Score=99.53 Aligned_cols=162 Identities=10% Similarity=0.074 Sum_probs=104.7
Q ss_pred cCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCC-CCeEE--EEEe--CCCCCeEEEEEecCCCEEEEEEC-CCcEEEEec
Q psy8430 160 HRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQ-TGKCV--LQYS--GHSGSVNSVRFLPNKDLVLSASG-DKSVHIWQA 232 (361)
Q Consensus 160 h~~~V~~l~~~~~~~~l~s~s~-d~~i~~wd~~-~~~~~--~~~~--~h~~~v~~v~~~~~~~~l~s~~~-d~~i~lwd~ 232 (361)
+...+.+++|+|+|++|+++.. ++.|.+|++. +++.. ..+. .|...+..++|+|+|+++++++. ++.|.+|++
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~ 222 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVI 222 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEE
Confidence 5678999999999998887764 6799999998 67543 3343 24677999999999999887775 789999986
Q ss_pred cc--cccccCCCCCCCCCCCCCCCCCceecccccEEE----eCCCC------cEEEEE-EcCCCCEEEEEeCCC------
Q psy8430 233 VI--NWECLNNDNDSDLDESKEPDESSITLRTPVKEL----LGHSN------VVIAAD-WLSDGEQVITASWDR------ 293 (361)
Q Consensus 233 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~------~v~~~~-~~~~~~~l~s~~~d~------ 293 (361)
.. +.... ....+..+ .+|.. .+..++ |+|+|++|++++.+.
T Consensus 223 ~~~~g~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~ 282 (365)
T 1jof_A 223 DPATHMPVY--------------------THHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQG 282 (365)
T ss_dssp CTTTCCEEE--------------------EEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCC
T ss_pred eCCCCcEEE--------------------ccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCC
Confidence 42 21100 00000111 12222 588999 999999988776432
Q ss_pred cEEEeeCC-CCeEEE---EeecCCCCCeEEEEEc---C--CCccc--CCCeEEEEcCCC
Q psy8430 294 VANLFDVE-TGTILQ---SLTGHDEEPHILCVSS---Y--YSKVS--CDLFQRIQHLDC 341 (361)
Q Consensus 294 ~v~iwd~~-~~~~~~---~~~~h~~~v~~~~~s~---s--~~~v~--~dg~i~iW~~d~ 341 (361)
.|.+|++. +++... ....+...+..+.+++ + +++++ .++.|+||++|.
T Consensus 283 ~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 283 YIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred eEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 89999996 676543 2333333333333333 1 22221 358999995554
No 161
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.27 E-value=4.4e-10 Score=100.19 Aligned_cols=139 Identities=14% Similarity=0.084 Sum_probs=96.2
Q ss_pred cCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeE--EEEEe---CCCCCeEEEEEecCCCEEEEEECC--CcEEEEe
Q psy8430 160 HRDGVWDVAVRPGQPVLGSAS-ADRTVRLWSTQTGKC--VLQYS---GHSGSVNSVRFLPNKDLVLSASGD--KSVHIWQ 231 (361)
Q Consensus 160 h~~~V~~l~~~~~~~~l~s~s-~d~~i~~wd~~~~~~--~~~~~---~h~~~v~~v~~~~~~~~l~s~~~d--~~i~lwd 231 (361)
+...+..++|+|+|+++++++ .++.|.+|++.++.. +..+. .+...+..++|+|+|++|+++..+ +.|.+|+
T Consensus 209 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~ 288 (361)
T 3scy_A 209 PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFK 288 (361)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence 445678999999999887777 689999999987754 33332 234567899999999988776654 8999999
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEe--eCCCCeEEEE
Q psy8430 232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLF--DVETGTILQS 308 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iw--d~~~~~~~~~ 308 (361)
+..... ....+..+.. ...+..++|+|+|++|++++ .++.|.+| |..+|+....
T Consensus 289 ~~~~~g----------------------~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 289 VDETNG----------------------TLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp ECTTTC----------------------CEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEEC
T ss_pred EcCCCC----------------------cEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeec
Confidence 852100 0012333433 45678899999999998888 56889995 5567776544
Q ss_pred ee-cCCCCCeEEEE
Q psy8430 309 LT-GHDEEPHILCV 321 (361)
Q Consensus 309 ~~-~h~~~v~~~~~ 321 (361)
.. .+...+.|+.+
T Consensus 346 ~~~~~~~~p~~v~~ 359 (361)
T 3scy_A 346 KKDIKVDKPVCLKF 359 (361)
T ss_dssp SCCEECSSEEEEEE
T ss_pred ceeeeCCCCeEEEE
Confidence 32 23344555444
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.26 E-value=1.8e-10 Score=103.02 Aligned_cols=161 Identities=9% Similarity=-0.024 Sum_probs=109.0
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCeEEEEEeC-CCCCeEEEEEecCCCE--EEEEE-------------
Q psy8430 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ-TGKCVLQYSG-HSGSVNSVRFLPNKDL--VLSAS------------- 222 (361)
Q Consensus 160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~-~~~~~~~~~~-h~~~v~~v~~~~~~~~--l~s~~------------- 222 (361)
+...+..++|+|+|++|++++.+ .|.+|++. +++....... ..+.+.+++|+|+|+. ++++.
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 44568899999999999999888 99999997 7776543321 1134667899999994 44543
Q ss_pred CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEEcCCCCEEEEEeC-CCcEEEeeC
Q psy8430 223 GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASW-DRVANLFDV 300 (361)
Q Consensus 223 ~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~ 300 (361)
.++.+.+|++...... ...+..+. .+...+.+++|+|+|+++++++. ++.|++||+
T Consensus 117 ~~g~v~v~~~~~~g~~----------------------~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~ 174 (365)
T 1jof_A 117 FAGYGNVFSVSETGKL----------------------EKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRK 174 (365)
T ss_dssp SCCEEEEEEECTTCCE----------------------EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCceEEEEccCCCCcC----------------------cceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEE
Confidence 6899999998632110 00111111 25567899999999999887764 688999999
Q ss_pred C-CCeEE--EEee--cCCCCCeEEEEEcCC--Cccc--CCCeEEEEcCCCCC
Q psy8430 301 E-TGTIL--QSLT--GHDEEPHILCVSSYY--SKVS--CDLFQRIQHLDCGT 343 (361)
Q Consensus 301 ~-~~~~~--~~~~--~h~~~v~~~~~s~s~--~~v~--~dg~i~iW~~d~~~ 343 (361)
. +++.. ..+. .|...+..+.+++++ ++++ .++.|.+|++|..+
T Consensus 175 ~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~ 226 (365)
T 1jof_A 175 LASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT 226 (365)
T ss_dssp CTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred CCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCC
Confidence 8 77653 3343 234556666666653 2332 47899999655533
No 163
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.25 E-value=1.2e-09 Score=93.90 Aligned_cols=158 Identities=15% Similarity=0.166 Sum_probs=114.3
Q ss_pred eeeeEEee-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecCCCEEEEEECCCcE
Q psy8430 151 CYKIRSFS-GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSV 227 (361)
Q Consensus 151 ~~~~~~l~-~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~i 227 (361)
++.+..+. .+...+.+++++|+|+++++...++.|.+||. .++.+..+. .+...+.+++++|+++++++...++.|
T Consensus 109 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i 187 (286)
T 1q7f_A 109 GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCV 187 (286)
T ss_dssp SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEE
T ss_pred CcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEE
Confidence 44455553 34567899999999998888888899999996 466666664 355678999999999988888889999
Q ss_pred EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC--CCCcEEEEEEcCCCCEEEEEeCCC-cEEEeeCCCCe
Q psy8430 228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG--HSNVVIAADWLSDGEQVITASWDR-VANLFDVETGT 304 (361)
Q Consensus 228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d~-~v~iwd~~~~~ 304 (361)
.+||.... .+..+.. +...+..++++++|.++++...++ .|.+||. +++
T Consensus 188 ~~~~~~g~---------------------------~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~ 239 (286)
T 1q7f_A 188 KVFNYEGQ---------------------------YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQ 239 (286)
T ss_dssp EEEETTCC---------------------------EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSC
T ss_pred EEEcCCCC---------------------------EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCC
Confidence 99997432 2233322 235788999999999888888776 9999995 577
Q ss_pred EEEEeecCCCC--CeEEEEEcCC-Ccc-cCCCeEEEE
Q psy8430 305 ILQSLTGHDEE--PHILCVSSYY-SKV-SCDLFQRIQ 337 (361)
Q Consensus 305 ~~~~~~~h~~~--v~~~~~s~s~-~~v-~~dg~i~iW 337 (361)
.+..+..+... +..+.+++.+ ++| ..|+.|++|
T Consensus 240 ~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~ 276 (286)
T 1q7f_A 240 LISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIY 276 (286)
T ss_dssp EEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEE
T ss_pred EEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEE
Confidence 77777655432 3344444431 111 368999999
No 164
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.25 E-value=1.1e-09 Score=97.92 Aligned_cols=205 Identities=9% Similarity=-0.015 Sum_probs=129.1
Q ss_pred eEEeeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEEeCC------C
Q psy8430 140 IVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH------S 203 (361)
Q Consensus 140 ~~~~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s----------~d~~i~~wd~~~~~~~~~~~~h------~ 203 (361)
.+..+. ..+++.+.++..+..+ .++|+|+|+++++++ .+++|.+||..+++.+..+... .
T Consensus 32 ~v~v~D--~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g 107 (361)
T 2oiz_A 32 RVHVYD--YTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGL 107 (361)
T ss_dssp EEEEEE--TTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBC
T ss_pred eEEEEE--CCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccC
Confidence 344443 3455667777777666 899999999998886 3678999999999888887632 3
Q ss_pred CCeEEEEEecCCCEEEEEEC--CCcEEEEeccccccccC-CCCCCC-----CC-----------CC------CCCCCCce
Q psy8430 204 GSVNSVRFLPNKDLVLSASG--DKSVHIWQAVINWECLN-NDNDSD-----LD-----------ES------KEPDESSI 258 (361)
Q Consensus 204 ~~v~~v~~~~~~~~l~s~~~--d~~i~lwd~~~~~~~~~-~~~~~~-----~~-----------~~------~~~~~~~~ 258 (361)
.....++|+|+|++|+++.. +++|.+||+.++..+.. ...... .. .. ........
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~ 187 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVA 187 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEE
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEe
Confidence 45778999999999988874 68999999987755432 110000 00 00 00000000
Q ss_pred ---------------------ecc---------cccEEEeCCC-----------------------CcEEEEEEcCCCCE
Q psy8430 259 ---------------------TLR---------TPVKELLGHS-----------------------NVVIAADWLSDGEQ 285 (361)
Q Consensus 259 ---------------------~~~---------~~~~~~~~~~-----------------------~~v~~~~~~~~~~~ 285 (361)
... ..+..+.... .....++|+|+++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~ 267 (361)
T 2oiz_A 188 SQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGR 267 (361)
T ss_dssp EEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTE
T ss_pred eeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCe
Confidence 000 0001111000 00012688999888
Q ss_pred EEEEeC-----------CCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcC--CCcccCCCeEEEEcCCCCCCCCcceeee
Q psy8430 286 VITASW-----------DRVANLFDVETGTILQSLTGHDEEPHILCVSSY--YSKVSCDLFQRIQHLDCGTSENPIHSVC 352 (361)
Q Consensus 286 l~s~~~-----------d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s--~~~v~~dg~i~iW~~d~~~~~~~~~~v~ 352 (361)
++.+.. .+.|.+||+.+++.+.++..+. +..+.++++ +++++.++.|.+| |..++. .+.+.
T Consensus 268 lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~--D~~t~~--l~~~~ 341 (361)
T 2oiz_A 268 MYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVY--DISQPE--PKLLR 341 (361)
T ss_dssp EEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSSCEEEE--ECSSSS--CEEEE
T ss_pred EEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEE--ECCCCc--ceeeE
Confidence 887653 3479999999999999999877 777777766 3345455999999 774431 14455
Q ss_pred ee
Q psy8430 353 VF 354 (361)
Q Consensus 353 ~~ 354 (361)
.+
T Consensus 342 ~i 343 (361)
T 2oiz_A 342 TI 343 (361)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 165
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.23 E-value=2.2e-11 Score=118.91 Aligned_cols=113 Identities=18% Similarity=0.161 Sum_probs=89.0
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC---CeEEEEEecCCCEEEEEEC---------CCcEEEEecc
Q psy8430 166 DVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG---SVNSVRFLPNKDLVLSASG---------DKSVHIWQAV 233 (361)
Q Consensus 166 ~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~---~v~~v~~~~~~~~l~s~~~---------d~~i~lwd~~ 233 (361)
+++|+|+|.+++ ++.|++|++||+.+++....+.+|.. .|.+++|+|+|+.|++++. |+.|++||+.
T Consensus 20 ~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 678999996554 55799999999999988777765543 4899999999999998876 7899999998
Q ss_pred ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEE
Q psy8430 234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 307 (361)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 307 (361)
++..+.. ..+ ...+..++|||||++|+.+. ++.|++||+.+++...
T Consensus 99 ~g~~~~~------------------------~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~ 144 (719)
T 1z68_A 99 NGEFVRG------------------------NEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQ 144 (719)
T ss_dssp TTEECCS------------------------SCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEE
T ss_pred CCccccc------------------------eec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEE
Confidence 7632100 111 14577899999999999986 7899999999887654
No 166
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.22 E-value=3.4e-09 Score=103.38 Aligned_cols=137 Identities=9% Similarity=-0.011 Sum_probs=97.8
Q ss_pred ccCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCc-------
Q psy8430 159 GHRDGVWDVAVRPGQPVLGSASADR-----TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS------- 226 (361)
Q Consensus 159 ~h~~~V~~l~~~~~~~~l~s~s~d~-----~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~------- 226 (361)
+|...+..++|+|||++|+.++.++ +|++||+.+++.+.....+ ..+..++|+|+|+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 3545688999999999988776543 8999999999876543322 23678999999999999888766
Q ss_pred ---------EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC-----C
Q psy8430 227 ---------VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-----D 292 (361)
Q Consensus 227 ---------i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-----d 292 (361)
|.+|++.++... ...+.....|...+..+.|+|+|++|+.++. +
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~----------------------~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~ 258 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSE----------------------DILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPV 258 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGG----------------------CEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSC
T ss_pred ccccCCCCEEEEEECCCCccc----------------------ceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCc
Confidence 999998655210 0011111224556889999999999988765 5
Q ss_pred CcEEEeeCCC------Ce-EEEEeecCCCCCeE
Q psy8430 293 RVANLFDVET------GT-ILQSLTGHDEEPHI 318 (361)
Q Consensus 293 ~~v~iwd~~~------~~-~~~~~~~h~~~v~~ 318 (361)
..|++||+.+ +. ....+..+...+..
T Consensus 259 ~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~ 291 (710)
T 2xdw_A 259 NRLWYCDLQQESNGITGILKWVKLIDNFEGEYD 291 (710)
T ss_dssp CEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE
T ss_pred cEEEEEECcccccccCCccceEEeeCCCCcEEE
Confidence 6899999987 53 45666666555544
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.20 E-value=2e-09 Score=96.78 Aligned_cols=172 Identities=13% Similarity=0.004 Sum_probs=117.2
Q ss_pred eecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEE--ecCCCEEEEE
Q psy8430 144 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF--LPNKDLVLSA 221 (361)
Q Consensus 144 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~--~~~~~~l~s~ 221 (361)
|..+...++......+|...+..+.|+|||+.|+.++.++.|++||+.+++....+..+...+....| +|++..++..
T Consensus 63 ~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~ 142 (388)
T 3pe7_A 63 YLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGI 142 (388)
T ss_dssp EEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEE
T ss_pred EEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccc
Confidence 44444455666656667666667889999999999999999999999999877777766666655544 7899888743
Q ss_pred E----------------------CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEE
Q psy8430 222 S----------------------GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW 279 (361)
Q Consensus 222 ~----------------------~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 279 (361)
. .+..|.+||+.++ ....+..+...+..+.|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g---------------------------~~~~l~~~~~~~~~~~~ 195 (388)
T 3pe7_A 143 EIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG---------------------------ESTVILQENQWLGHPIY 195 (388)
T ss_dssp EEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC---------------------------CEEEEEEESSCEEEEEE
T ss_pred cccCcccccccccchhhhhhccCCcceEEEEECCCC---------------------------ceEEeecCCccccccEE
Confidence 2 3467889998765 23444456677899999
Q ss_pred cC-CCCEEEEEeCC------CcEEEeeCCCCeEEEEeecCCC--CCeEEEEEcCCC---cccC-----CCeEEEEcCCCC
Q psy8430 280 LS-DGEQVITASWD------RVANLFDVETGTILQSLTGHDE--EPHILCVSSYYS---KVSC-----DLFQRIQHLDCG 342 (361)
Q Consensus 280 ~~-~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~h~~--~v~~~~~s~s~~---~v~~-----dg~i~iW~~d~~ 342 (361)
+| +|+.|+.++.+ ..|.++|...+.. ..+..+.. .+....+++++. +++. ++.|.+| |+.
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~--d~~ 272 (388)
T 3pe7_A 196 RPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSA--DPE 272 (388)
T ss_dssp ETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEE--CTT
T ss_pred CCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEE--ecC
Confidence 99 99999887764 3688888875543 44444432 344455555532 1111 2249999 774
Q ss_pred CCC
Q psy8430 343 TSE 345 (361)
Q Consensus 343 ~~~ 345 (361)
+++
T Consensus 273 ~g~ 275 (388)
T 3pe7_A 273 TLE 275 (388)
T ss_dssp TCC
T ss_pred CCc
Confidence 443
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.19 E-value=3.3e-09 Score=93.39 Aligned_cols=153 Identities=10% Similarity=0.023 Sum_probs=112.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCC------------------------CcEEEEeCCCCeEEEEEe-CCCCCeEEEEEecCC
Q psy8430 161 RDGVWDVAVRPGQPVLGSASAD------------------------RTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNK 215 (361)
Q Consensus 161 ~~~V~~l~~~~~~~~l~s~s~d------------------------~~i~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~ 215 (361)
-+.+.+++++|+|+++++.+.+ ++|.+||..+++.+..+. ++-..+..++++|++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4779999999999999988877 479999999898876664 445689999999999
Q ss_pred CEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE---------eCCCCcEEEEEEcC-CCCE
Q psy8430 216 DLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL---------LGHSNVVIAADWLS-DGEQ 285 (361)
Q Consensus 216 ~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~v~~~~~~~-~~~~ 285 (361)
+++++...++.|.+||...... .+..+ .++......++++| +|.+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~-------------------------~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~l 157 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEG-------------------------PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAV 157 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSC-------------------------CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCE
T ss_pred CEEEEECCCCEEEEEeCCCCeE-------------------------EEEEecccCCCCCCccccCCCcEEEEeCCCCeE
Confidence 9888888899999999753310 11111 23445788999999 7888
Q ss_pred EEEEe-CCCcEEEeeCCCCeEEEEeecCCC----------CCeEEEEEcC--CCcc--cCCCeEEEEcCCC
Q psy8430 286 VITAS-WDRVANLFDVETGTILQSLTGHDE----------EPHILCVSSY--YSKV--SCDLFQRIQHLDC 341 (361)
Q Consensus 286 l~s~~-~d~~v~iwd~~~~~~~~~~~~h~~----------~v~~~~~s~s--~~~v--~~dg~i~iW~~d~ 341 (361)
+++.+ .++.|++|| .+|..+..+..... ....+.+... .++| ..++.|++| |.
T Consensus 158 yv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~--~~ 225 (329)
T 3fvz_A 158 FVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCF--KT 225 (329)
T ss_dssp EEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEE--ET
T ss_pred EEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEE--EC
Confidence 88886 689999999 56787777743221 2344555443 2233 278899999 65
No 169
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.19 E-value=1e-10 Score=114.65 Aligned_cols=183 Identities=9% Similarity=-0.033 Sum_probs=115.9
Q ss_pred eEEeeecCccceeeeEEeeccCCC-----eEEEEEcCCCCEEEEEeCC---------CcEEEEeCCCCeEEEEEeCCCCC
Q psy8430 140 IVSSFKTSLLSCYKIRSFSGHRDG-----VWDVAVRPGQPVLGSASAD---------RTVRLWSTQTGKCVLQYSGHSGS 205 (361)
Q Consensus 140 ~~~~~~~~~~~~~~~~~l~~h~~~-----V~~l~~~~~~~~l~s~s~d---------~~i~~wd~~~~~~~~~~~~h~~~ 205 (361)
.+..|... +++....+.+|... ...+.|||||++|+.++.+ +.+.+||+.+++.. .+..|...
T Consensus 37 ~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~ 113 (740)
T 4a5s_A 37 NILVFNAE--YGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNN 113 (740)
T ss_dssp EEEEEETT--TCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTT
T ss_pred cEEEEECC--CCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCc
Confidence 34444443 33444556676543 3457899999999998886 55679999998754 45667889
Q ss_pred eEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCC---------cEEE
Q psy8430 206 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSN---------VVIA 276 (361)
Q Consensus 206 v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~v~~ 276 (361)
+..++|+|+|+.|+.+. |+.|.+|++.++....-.. .......+.++.. ...+
T Consensus 114 ~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~-----------------~g~~~~~~~g~~~~v~~ee~~~~~~~ 175 (740)
T 4a5s_A 114 TQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITW-----------------TGKEDIIYNGITDWVYEEEVFSAYSA 175 (740)
T ss_dssp EEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCS-----------------CCBTTTEEESBCCHHHHHHTSSSSBC
T ss_pred ceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcC-----------------CCCccceecCcccccccchhcCCCcc
Confidence 99999999999998874 7899999987663221100 0001112223322 2235
Q ss_pred EEEcCCCCEEEEEeCCC------------------------------------cEEEeeCCC---Ce--EEEEee-----
Q psy8430 277 ADWLSDGEQVITASWDR------------------------------------VANLFDVET---GT--ILQSLT----- 310 (361)
Q Consensus 277 ~~~~~~~~~l~s~~~d~------------------------------------~v~iwd~~~---~~--~~~~~~----- 310 (361)
+.|||||++|+.++.|. .|++||+.+ +. ....+.
T Consensus 176 ~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~ 255 (740)
T 4a5s_A 176 LWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASM 255 (740)
T ss_dssp EEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHH
T ss_pred eEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccC
Confidence 88999999999876332 478899988 73 222333
Q ss_pred -cCCCCCeEEEEEcCCC----cc---cCCCeEEEEcCCCCCCC
Q psy8430 311 -GHDEEPHILCVSSYYS----KV---SCDLFQRIQHLDCGTSE 345 (361)
Q Consensus 311 -~h~~~v~~~~~s~s~~----~v---~~dg~i~iW~~d~~~~~ 345 (361)
+|...+..+.+++++. .+ ..+..|++| |+.++.
T Consensus 256 ~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~--d~~tg~ 296 (740)
T 4a5s_A 256 LIGDHYLCDVTWATQERISLQWLRRIQNYSVMDIC--DYDESS 296 (740)
T ss_dssp HTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEE--EEETTT
T ss_pred CCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEE--ECCCCc
Confidence 2555566656665522 11 134578999 665443
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.17 E-value=2.5e-10 Score=110.36 Aligned_cols=160 Identities=16% Similarity=0.062 Sum_probs=106.9
Q ss_pred eEEeeccCCCeE---------EEEEc--CCCCE-EEEEeC-CCcEEEEeCC--C-CeEEEEEeC-----CCCCeEEEEEe
Q psy8430 154 IRSFSGHRDGVW---------DVAVR--PGQPV-LGSASA-DRTVRLWSTQ--T-GKCVLQYSG-----HSGSVNSVRFL 212 (361)
Q Consensus 154 ~~~l~~h~~~V~---------~l~~~--~~~~~-l~s~s~-d~~i~~wd~~--~-~~~~~~~~~-----h~~~v~~v~~~ 212 (361)
.+.+..|...+. ...|+ |||+. |+.++. +..|.+|++. . +. ...+.. |...+.+++|+
T Consensus 60 ~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~s 138 (662)
T 3azo_A 60 EESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLL 138 (662)
T ss_dssp EEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEE
T ss_pred cceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEEC
Confidence 455666766665 56565 99998 776654 5667777765 2 43 344554 66788999999
Q ss_pred cCCCEEEEEECC----------CcEEEEeccc------cccccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEE
Q psy8430 213 PNKDLVLSASGD----------KSVHIWQAVI------NWECLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVI 275 (361)
Q Consensus 213 ~~~~~l~s~~~d----------~~i~lwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~ 275 (361)
|+|+.|+.++.| ..|.+||+.+ + ....+. .+...+.
T Consensus 139 pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---------------------------~~~~l~~~~~~~~~ 191 (662)
T 3azo_A 139 PERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS---------------------------AVRELSDDAHRFVT 191 (662)
T ss_dssp TTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG---------------------------GSEESSCSCSSEEC
T ss_pred CCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCC---------------------------ceeEEEecCCCccc
Confidence 999999988876 5799999875 3 223344 4556788
Q ss_pred EEEEcCCCCEEEEEeCCC--------cEEEeeCC-CC---eEEEEeecCCCCCeEEEEEcCCC--cc-cCCCeEEEEcCC
Q psy8430 276 AADWLSDGEQVITASWDR--------VANLFDVE-TG---TILQSLTGHDEEPHILCVSSYYS--KV-SCDLFQRIQHLD 340 (361)
Q Consensus 276 ~~~~~~~~~~l~s~~~d~--------~v~iwd~~-~~---~~~~~~~~h~~~v~~~~~s~s~~--~v-~~dg~i~iW~~d 340 (361)
.++|+|||++|+.++.++ .|++||+. ++ +......+|...+....+++++. ++ ..|+..+||.+|
T Consensus 192 ~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~ 271 (662)
T 3azo_A 192 GPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVD 271 (662)
T ss_dssp CCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEEC
T ss_pred CceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEE
Confidence 899999999999887553 79999999 57 44444444556666644444321 11 267744444336
Q ss_pred C
Q psy8430 341 C 341 (361)
Q Consensus 341 ~ 341 (361)
.
T Consensus 272 ~ 272 (662)
T 3azo_A 272 P 272 (662)
T ss_dssp T
T ss_pred C
Confidence 5
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.17 E-value=4.4e-09 Score=92.58 Aligned_cols=164 Identities=8% Similarity=0.009 Sum_probs=114.7
Q ss_pred eeeeEEee-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-EEEEE---------eCCCCCeEEEEEec-CCCEE
Q psy8430 151 CYKIRSFS-GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-CVLQY---------SGHSGSVNSVRFLP-NKDLV 218 (361)
Q Consensus 151 ~~~~~~l~-~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~-~~~~~---------~~h~~~v~~v~~~~-~~~~l 218 (361)
++.+..+. ++-.....++++|+|+++++...++.|++||..... .+..+ .++-.....|+++| ++.++
T Consensus 79 g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~ly 158 (329)
T 3fvz_A 79 AEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVF 158 (329)
T ss_dssp CCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEE
T ss_pred CeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEE
Confidence 44444443 455678999999999999998889999999985442 45555 24455789999999 78888
Q ss_pred EEEE-CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe----------CCCCcEEEEEEcCC-CCEE
Q psy8430 219 LSAS-GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL----------GHSNVVIAADWLSD-GEQV 286 (361)
Q Consensus 219 ~s~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~-~~~l 286 (361)
++.+ .++.|++|+.... .+..+. ++......++++|+ +.++
T Consensus 159 v~d~~~~~~I~~~~~~g~---------------------------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~ 211 (329)
T 3fvz_A 159 VSDGYCNSRIVQFSPSGK---------------------------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLC 211 (329)
T ss_dssp EEECSSCCEEEEECTTSC---------------------------EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEE
T ss_pred EEeCCCCCeEEEEcCCCC---------------------------EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEE
Confidence 8886 6899999984321 111121 12245789999998 7777
Q ss_pred EEEeCCCcEEEeeCCCCeEEEEeec--CCCCCeEEEEEcC-------CCcc--cCCCeEEEEcCCCCC
Q psy8430 287 ITASWDRVANLFDVETGTILQSLTG--HDEEPHILCVSSY-------YSKV--SCDLFQRIQHLDCGT 343 (361)
Q Consensus 287 ~s~~~d~~v~iwd~~~~~~~~~~~~--h~~~v~~~~~s~s-------~~~v--~~dg~i~iW~~d~~~ 343 (361)
++...++.|++||..+|+.+..+.. +...+..+.++++ ..++ ..+..|++| |..+
T Consensus 212 v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~--~~~~ 277 (329)
T 3fvz_A 212 VADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVM--NFSS 277 (329)
T ss_dssp EEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEE--ETTT
T ss_pred EEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEE--EcCC
Confidence 7777889999999999999888853 3444554444441 1222 345689999 7633
No 172
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.16 E-value=8.8e-09 Score=89.07 Aligned_cols=158 Identities=11% Similarity=0.022 Sum_probs=109.7
Q ss_pred eEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC----CCCeEEEEEecCCCEEEEEEC------
Q psy8430 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH----SGSVNSVRFLPNKDLVLSASG------ 223 (361)
Q Consensus 154 ~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h----~~~v~~v~~~~~~~~l~s~~~------ 223 (361)
...+..+...+.+++++|+|.++++...++.|.+||..+++........ ...+..++++|+|+++++.+.
T Consensus 61 ~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~ 140 (296)
T 3e5z_A 61 LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKP 140 (296)
T ss_dssp EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCG
T ss_pred eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccc
Confidence 4566677888999999999998888877899999999888754333211 235678999999998887431
Q ss_pred -----------CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC
Q psy8430 224 -----------DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD 292 (361)
Q Consensus 224 -----------d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 292 (361)
.+.|..++.. + ....+..+......++|+|+|+.+++.+.+
T Consensus 141 ~~~~~~~~~~~~~~l~~~~~~-g---------------------------~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~ 192 (296)
T 3e5z_A 141 EEGYGGEMELPGRWVFRLAPD-G---------------------------TLSAPIRDRVKPNGLAFLPSGNLLVSDTGD 192 (296)
T ss_dssp GGSSCCCCCSSSCEEEEECTT-S---------------------------CEEEEECCCSSEEEEEECTTSCEEEEETTT
T ss_pred cccccccccCCCcEEEEECCC-C---------------------------CEEEeecCCCCCccEEECCCCCEEEEeCCC
Confidence 2344444432 1 233445566678899999999999878888
Q ss_pred CcEEEeeCC-CCeE---EEEeecCCCCCeEEEEEcC-CCcccCCCeEEEEcCCC
Q psy8430 293 RVANLFDVE-TGTI---LQSLTGHDEEPHILCVSSY-YSKVSCDLFQRIQHLDC 341 (361)
Q Consensus 293 ~~v~iwd~~-~~~~---~~~~~~h~~~v~~~~~s~s-~~~v~~dg~i~iW~~d~ 341 (361)
+.|.+||+. ++.. ...+..+...+..+.+... .+.++.++.|.+| |.
T Consensus 193 ~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~v~~~--~~ 244 (296)
T 3e5z_A 193 NATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASAGDGVHVL--TP 244 (296)
T ss_dssp TEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEETTEEEEE--CT
T ss_pred CeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEcCCeEEEE--CC
Confidence 999999987 5654 3333334444455666554 2344457889999 65
No 173
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.15 E-value=1.4e-10 Score=113.60 Aligned_cols=116 Identities=9% Similarity=0.054 Sum_probs=93.9
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCC-----eEEEEEecCCCEEEEEECC---------CcE
Q psy8430 162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS-----VNSVRFLPNKDLVLSASGD---------KSV 227 (361)
Q Consensus 162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~-----v~~v~~~~~~~~l~s~~~d---------~~i 227 (361)
....++.|+|+|.+++++ |++|++||+.++++...+.+|... ...+.|+|+|+.++.++.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 446689999999988886 999999999999988778877643 2447899999999988876 556
Q ss_pred EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEE
Q psy8430 228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 307 (361)
Q Consensus 228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 307 (361)
.+||+.++. ...+..|...+...+|||||+.|+.+. |+.|++||+.++...+
T Consensus 95 ~~~d~~~~~---------------------------~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~ 146 (740)
T 4a5s_A 95 DIYDLNKRQ---------------------------LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYR 146 (740)
T ss_dssp EEEETTTTE---------------------------ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEE
T ss_pred EEEECCCCc---------------------------EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEE
Confidence 799998762 223445677899999999999999885 6899999999887554
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.14 E-value=1.7e-09 Score=97.11 Aligned_cols=148 Identities=9% Similarity=-0.068 Sum_probs=108.8
Q ss_pred cceeeeEEeeccCCCeEE-----EEEcCCCCEEEEEeC-CC--cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEE
Q psy8430 149 LSCYKIRSFSGHRDGVWD-----VAVRPGQPVLGSASA-DR--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLS 220 (361)
Q Consensus 149 ~~~~~~~~l~~h~~~V~~-----l~~~~~~~~l~s~s~-d~--~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s 220 (361)
.++..+..+..|...+.. .+|+|||+.|+.++. ++ .|.+||+.+++......++...+..+.|+|+++.|+.
T Consensus 18 ~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~ 97 (388)
T 3pe7_A 18 STGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFY 97 (388)
T ss_dssp TTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEE
T ss_pred CCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEE
Confidence 445566777778776666 889999999998887 66 4888899998877776667666667889999999999
Q ss_pred EECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEE--EcCCCCEEEEE---------
Q psy8430 221 ASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAAD--WLSDGEQVITA--------- 289 (361)
Q Consensus 221 ~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~s~--------- 289 (361)
++.++.+.+||+.++. .......+...+.... ++|++.+++..
T Consensus 98 ~~~~~~l~~~d~~~g~--------------------------~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~ 151 (388)
T 3pe7_A 98 VKDGRNLMRVDLATLE--------------------------ENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVP 151 (388)
T ss_dssp EETTTEEEEEETTTCC--------------------------EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC
T ss_pred EeCCCeEEEEECCCCc--------------------------ceeeeechhhcccccceeECCCCCeeccccccCccccc
Confidence 9999999999997662 2222334444444333 48999988753
Q ss_pred -------------eCCCcEEEeeCCCCeEEEEeecCCCCCeEEEEEc
Q psy8430 290 -------------SWDRVANLFDVETGTILQSLTGHDEEPHILCVSS 323 (361)
Q Consensus 290 -------------~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~ 323 (361)
..+..|++||+.+++... +..+...+....+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp 197 (388)
T 3pe7_A 152 LTDWKKFHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRP 197 (388)
T ss_dssp CCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEET
T ss_pred ccccchhhhhhccCCcceEEEEECCCCceEE-eecCCccccccEECC
Confidence 244679999999987544 444555666667777
No 175
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.13 E-value=1.1e-08 Score=90.06 Aligned_cols=161 Identities=7% Similarity=-0.075 Sum_probs=112.0
Q ss_pred eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECC----CcE
Q psy8430 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD----KSV 227 (361)
Q Consensus 152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d----~~i 227 (361)
.....+.++...+.+++|+|+|.+++++..++.|.+||..+++.......+...+.+++|+|+++++++...+ +.|
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i 114 (333)
T 2dg1_A 35 EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGI 114 (333)
T ss_dssp EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEE
T ss_pred ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceE
Confidence 3455666777888999999999988888889999999998887665554567889999999999988877766 689
Q ss_pred EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe--CCCCcEEEEEEcCCCCEEEEEeC------CCcEEEee
Q psy8430 228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASW------DRVANLFD 299 (361)
Q Consensus 228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~------d~~v~iwd 299 (361)
.+||..++.. ...+. .+...+..++++|+|.++++... .+.|..||
T Consensus 115 ~~~d~~~~~~--------------------------~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~ 168 (333)
T 2dg1_A 115 FAATENGDNL--------------------------QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVS 168 (333)
T ss_dssp EEECTTSCSC--------------------------EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEEC
T ss_pred EEEeCCCCEE--------------------------EEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEe
Confidence 9999765421 00111 23457899999999988877654 35677777
Q ss_pred CCCCeEEEEeecCCCCCeEEEEEcCC--Ccc--cCCCeEEEEcCCC
Q psy8430 300 VETGTILQSLTGHDEEPHILCVSSYY--SKV--SCDLFQRIQHLDC 341 (361)
Q Consensus 300 ~~~~~~~~~~~~h~~~v~~~~~s~s~--~~v--~~dg~i~iW~~d~ 341 (361)
..+++..... .+...+..+.++... +++ ..++.|.+| |.
T Consensus 169 ~~~~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~--d~ 211 (333)
T 2dg1_A 169 PDFRTVTPII-QNISVANGIALSTDEKVLWVTETTANRLHRI--AL 211 (333)
T ss_dssp TTSCCEEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEE--EE
T ss_pred CCCCEEEEee-cCCCcccceEECCCCCEEEEEeCCCCeEEEE--Ee
Confidence 6655543322 222233444444432 222 257899999 65
No 176
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.13 E-value=1e-08 Score=87.85 Aligned_cols=161 Identities=9% Similarity=0.007 Sum_probs=113.1
Q ss_pred cceeeeEEeeccC-CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC-CCCeEEEEEecCCCEEEEEEC-CC
Q psy8430 149 LSCYKIRSFSGHR-DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH-SGSVNSVRFLPNKDLVLSASG-DK 225 (361)
Q Consensus 149 ~~~~~~~~l~~h~-~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~~~-d~ 225 (361)
.+++.+.++..+. ..+.++.+.|+|++++ +.++.|..||. +|+.+..+..+ ...+.++.+.|+|+.+++.+. ++
T Consensus 23 ~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~ 99 (276)
T 3no2_A 23 DTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPS 99 (276)
T ss_dssp TTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTE
T ss_pred CCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCC
Confidence 4556666666665 4788999999999888 45788999999 89988888864 357889999999999999887 77
Q ss_pred cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430 226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI 305 (361)
Q Consensus 226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 305 (361)
.+..+|. .++.+... .. .....++......+++.++|.++++...++.|..||.. |+.
T Consensus 100 ~v~~vd~-~Gk~l~~~-----------------~~---~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 100 TILEVNM-KGEVLSKT-----------------EF---ETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEEECT-TSCEEEEE-----------------EE---CCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred EEEEEeC-CCCEEEEE-----------------ec---cCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 7877775 33211100 00 00001122234456789999999999999999999998 999
Q ss_pred EEEeecCCCCCeE-------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430 306 LQSLTGHDEEPHI-------LCVSSYYSKVSCDLFQRIQHLDC 341 (361)
Q Consensus 306 ~~~~~~h~~~v~~-------~~~s~s~~~v~~dg~i~iW~~d~ 341 (361)
+.++..+..+... +++++. .++.|..+ |.
T Consensus 158 ~w~~~~~~~~~~~~~~~~g~~~v~~~-----~~~~v~~~--d~ 193 (276)
T 3no2_A 158 LNSVKLSGTPFSSAFLDNGDCLVACG-----DAHCFVQL--NL 193 (276)
T ss_dssp EEEEECSSCCCEEEECTTSCEEEECB-----TTSEEEEE--CT
T ss_pred EEEEECCCCccceeEcCCCCEEEEeC-----CCCeEEEE--eC
Confidence 9888765333222 444444 56677777 55
No 177
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.12 E-value=1.5e-09 Score=96.95 Aligned_cols=128 Identities=11% Similarity=0.013 Sum_probs=100.8
Q ss_pred ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccc
Q psy8430 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC 238 (361)
Q Consensus 159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~ 238 (361)
.+.+ |+.++| ++.+|+++ .++.|++||+.+.........|...|.++.+.+. .+++++.||.+.+||+..+.
T Consensus 86 ~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~-- 157 (388)
T 1xip_A 86 EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKS-- 157 (388)
T ss_dssp ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCC--
T ss_pred eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCc--
Confidence 4667 999999 88999998 8899999999876555566668888998887654 38889999999999997541
Q ss_pred cCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE--EEEe------e
Q psy8430 239 LNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI--LQSL------T 310 (361)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~--~~~~------~ 310 (361)
. .. +...|.+++|||+| ++.|..||.+++|+...+++ ..++ .
T Consensus 158 ------------------------~-~~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~ 207 (388)
T 1xip_A 158 ------------------------T-KQ---LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELE 207 (388)
T ss_dssp ------------------------E-EE---EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHH
T ss_pred ------------------------c-cc---ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccc
Confidence 1 11 34689999999999 78899999999999988776 5666 2
Q ss_pred ---cCCCCCeEEEEEcC
Q psy8430 311 ---GHDEEPHILCVSSY 324 (361)
Q Consensus 311 ---~h~~~v~~~~~s~s 324 (361)
+|...|.++.+.+.
T Consensus 208 ~~~~~~~~V~sI~wl~~ 224 (388)
T 1xip_A 208 ELPVEEYSPLSVTILSP 224 (388)
T ss_dssp TSCTTTSEEEEEEESSS
T ss_pred cccCCCeeEEEEEEecC
Confidence 35666777655554
No 178
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.11 E-value=4.7e-09 Score=102.11 Aligned_cols=158 Identities=9% Similarity=-0.056 Sum_probs=104.4
Q ss_pred ccCCCeEEEEEcCCCCEEE-----EEeCCCcEEEEeCCCCeEEEEEeCCCCCe--EEEEEecCCCEEEEEECCCc-----
Q psy8430 159 GHRDGVWDVAVRPGQPVLG-----SASADRTVRLWSTQTGKCVLQYSGHSGSV--NSVRFLPNKDLVLSASGDKS----- 226 (361)
Q Consensus 159 ~h~~~V~~l~~~~~~~~l~-----s~s~d~~i~~wd~~~~~~~~~~~~h~~~v--~~v~~~~~~~~l~s~~~d~~----- 226 (361)
+|...+..++|||||++|+ .|+.+.+|++||+.+++.+. ..+...+ ..++|+|+|+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 4666789999999999888 44445789999999987541 1122223 68899999999999998776
Q ss_pred --------EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC----c
Q psy8430 227 --------VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR----V 294 (361)
Q Consensus 227 --------i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~----~ 294 (361)
|++|++.++... ...+.....+...+.++.|+|+|++|+.++.++ .
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~----------------------~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~ 253 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSK----------------------DTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSEND 253 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGG----------------------CEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEE
T ss_pred ccCCCCCEEEEEECCCCchh----------------------ceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceE
Confidence 999998765210 012222234556788999999999998887766 6
Q ss_pred EEEeeCCCCeEEEEeecCCCCCeEEEEEcCCCcc-----cCCCeEEEEcCCCCC
Q psy8430 295 ANLFDVETGTILQSLTGHDEEPHILCVSSYYSKV-----SCDLFQRIQHLDCGT 343 (361)
Q Consensus 295 v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~~v-----~~dg~i~iW~~d~~~ 343 (361)
|++||..++.. ..+..+...+...++..+.+++ ..++.|.+| |+.+
T Consensus 254 l~~~~~~~~~~-~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~--d~~~ 304 (695)
T 2bkl_A 254 VYWKRPGEKDF-RLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEV--DPAK 304 (695)
T ss_dssp EEEECTTCSSC-EEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEE--BTTB
T ss_pred EEEEcCCCCce-EEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEE--eCCC
Confidence 77887766543 3444444443332221111111 135889999 6633
No 179
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.04 E-value=4.2e-08 Score=84.24 Aligned_cols=151 Identities=15% Similarity=0.120 Sum_probs=107.4
Q ss_pred cCCCeEEEEE-cCCCCEEEEEeC-CCcEEEEeCCCCeEEEEEe-CCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccc
Q psy8430 160 HRDGVWDVAV-RPGQPVLGSASA-DRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW 236 (361)
Q Consensus 160 h~~~V~~l~~-~~~~~~l~s~s~-d~~i~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~ 236 (361)
|...+.++++ .+++.++++... ++.|.+|| .+++.+..+. .+...+.+++++|+++++++...++.|.+||....
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~- 152 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN- 152 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-
T ss_pred cccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC-
Confidence 5567899999 577777666643 88999999 5677776664 34467899999999998888888899999986422
Q ss_pred cccCCCCCCCCCCCCCCCCCceecccccEEEe--CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC-
Q psy8430 237 ECLNNDNDSDLDESKEPDESSITLRTPVKELL--GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD- 313 (361)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~- 313 (361)
....+. ++...+..++++|+|.++++...++.|++||.. ++.+..+..+.
T Consensus 153 --------------------------~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~ 205 (286)
T 1q7f_A 153 --------------------------VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGI 205 (286)
T ss_dssp --------------------------EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTT
T ss_pred --------------------------EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCc
Confidence 222222 345578999999999988888889999999974 66666665432
Q ss_pred -CCCeEEEEEcCC-Cccc--CCC-eEEEEcCCC
Q psy8430 314 -EEPHILCVSSYY-SKVS--CDL-FQRIQHLDC 341 (361)
Q Consensus 314 -~~v~~~~~s~s~-~~v~--~dg-~i~iW~~d~ 341 (361)
..+..+++.+.+ ++|+ .++ .|.+| |.
T Consensus 206 ~~~p~~i~~d~~G~l~v~~~~~~~~i~~~--~~ 236 (286)
T 1q7f_A 206 TNYPIGVGINSNGEILIADNHNNFNLTIF--TQ 236 (286)
T ss_dssp SCSEEEEEECTTCCEEEEECSSSCEEEEE--CT
T ss_pred cCCCcEEEECCCCCEEEEeCCCCEEEEEE--CC
Confidence 344555554431 2222 465 99999 64
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.02 E-value=2.3e-08 Score=97.44 Aligned_cols=158 Identities=10% Similarity=-0.050 Sum_probs=102.0
Q ss_pred eEEEEEcCCCCEEEEEeCCCc----------------EEEEeCCCCeE--EEEEe--CCCCCeEEEEEecCCCEEEEEEC
Q psy8430 164 VWDVAVRPGQPVLGSASADRT----------------VRLWSTQTGKC--VLQYS--GHSGSVNSVRFLPNKDLVLSASG 223 (361)
Q Consensus 164 V~~l~~~~~~~~l~s~s~d~~----------------i~~wd~~~~~~--~~~~~--~h~~~v~~v~~~~~~~~l~s~~~ 223 (361)
+..++|+|||+.|+.++.++. |++|++.++.. ...+. .|...+..+.|+|+|++|+.++.
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 678999999999999988876 99999988752 23333 35566889999999999887664
Q ss_pred -----CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC----c
Q psy8430 224 -----DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR----V 294 (361)
Q Consensus 224 -----d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~----~ 294 (361)
+..|.+||+.+... ..........+..+...+.. .|+|+|+.|+..+.++ .
T Consensus 253 ~~~~~~~~l~~~d~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~ 312 (710)
T 2xdw_A 253 EGCDPVNRLWYCDLQQESN-------------------GITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYR 312 (710)
T ss_dssp CSSSSCCEEEEEEGGGSSS-------------------SSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCE
T ss_pred ccCCCccEEEEEECccccc-------------------ccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCE
Confidence 56799999865100 00000124455566655554 4888999887776543 5
Q ss_pred EEEeeCCCCe--EEEEeecCCC--CCeEEEEE-cCCCc--ccCCCeEEEEcCCC
Q psy8430 295 ANLFDVETGT--ILQSLTGHDE--EPHILCVS-SYYSK--VSCDLFQRIQHLDC 341 (361)
Q Consensus 295 v~iwd~~~~~--~~~~~~~h~~--~v~~~~~s-~s~~~--v~~dg~i~iW~~d~ 341 (361)
|.+||+.++. ....+..|.. .+..+.++ ++.+. ...|+..+||-+|.
T Consensus 313 l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~ 366 (710)
T 2xdw_A 313 LINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDL 366 (710)
T ss_dssp EEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEET
T ss_pred EEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEEC
Confidence 9999998774 2345555543 34444444 22111 12677655554365
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.01 E-value=1.2e-08 Score=90.23 Aligned_cols=136 Identities=11% Similarity=0.106 Sum_probs=92.4
Q ss_pred eEEEEEcCCCCEEEEEeCC---------------------------CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC
Q psy8430 164 VWDVAVRPGQPVLGSASAD---------------------------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216 (361)
Q Consensus 164 V~~l~~~~~~~~l~s~s~d---------------------------~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~ 216 (361)
+..++|+|+|+.|+.++.+ ..|.+||+.+++.+..+.. . .+..+.|+|+|
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg- 182 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK- 182 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-
Confidence 9999999999988887642 5799999998876455554 3 78899999999
Q ss_pred EEEEEECCC-------cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy8430 217 LVLSASGDK-------SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA 289 (361)
Q Consensus 217 ~l~s~~~d~-------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 289 (361)
+++++..++ ...||.+.++ ....+..+ ..+..+ +|+|++|+.+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~l~~~d~~---------------------------~~~~l~~~-~~~~~~--spdg~~l~~~ 232 (347)
T 2gop_A 183 IVVNVPHREIIPQYFKFWDIYIWEDG---------------------------KEEKMFEK-VSFYAV--DSDGERILLY 232 (347)
T ss_dssp EEEEEECCCSSCCSSCCEEEEEEETT---------------------------EEEEEEEE-ESEEEE--EECSSCEEEE
T ss_pred EEEEEecccccccccccccEEEeCCC---------------------------ceEEeccC-cceeeE--CCCCCEEEEE
Confidence 877776652 4556654322 12223333 444444 8999998887
Q ss_pred eCC--------CcEEEeeCCCCeEEEEeecCCCCCeE-------EEEEcCCCcccCCCeEEEEcCC
Q psy8430 290 SWD--------RVANLFDVETGTILQSLTGHDEEPHI-------LCVSSYYSKVSCDLFQRIQHLD 340 (361)
Q Consensus 290 ~~d--------~~v~iwd~~~~~~~~~~~~h~~~v~~-------~~~s~s~~~v~~dg~i~iW~~d 340 (361)
+.+ ..|.+|| +++.......+...+.. ++++++ .|+.++|| ++
T Consensus 233 ~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~sdg~~~~~~-----~~~~~~l~-~~ 290 (347)
T 2gop_A 233 GKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKDGKVYFTLF-----EEGSVNLY-IW 290 (347)
T ss_dssp ECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEETTEEEEEEE-----ETTEEEEE-EE
T ss_pred EccccCCccccceEEEEC--CCceEeccccCCcccCCccEEcCcEEEEEe-----cCCcEEEE-Ec
Confidence 754 3688888 56554444444444543 344445 88999999 87
No 182
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.95 E-value=4.6e-08 Score=87.28 Aligned_cols=60 Identities=13% Similarity=0.228 Sum_probs=47.9
Q ss_pred cccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC--eEEEEeecCCCCCeEEEEEcC
Q psy8430 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG--TILQSLTGHDEEPHILCVSSY 324 (361)
Q Consensus 262 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~--~~~~~~~~h~~~v~~~~~s~s 324 (361)
+.+..+..+. +.+++|+|+|++|++++. +.|.+||..++ +.+.++..+......+.++++
T Consensus 297 ~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~ 358 (361)
T 2oiz_A 297 QRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPV 358 (361)
T ss_dssp EEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCC
T ss_pred cEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCC
Confidence 4556666666 899999999999999887 99999999999 999988655555555666554
No 183
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.95 E-value=5.7e-09 Score=93.13 Aligned_cols=139 Identities=11% Similarity=0.020 Sum_probs=104.1
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-----------EEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430 163 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-----------CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231 (361)
Q Consensus 163 ~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~-----------~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd 231 (361)
.++.+++++...++++|+.++ +.+|++.... ...... +.+ |..++| ++.+|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE-IPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE-CTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEee-CCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 689999999999999999985 5569865322 112233 666 999999 88899888 889999999
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430 232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG 311 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 311 (361)
+.+.. .......|...+.++.+.+. .+++++.||.+.+||+.++....
T Consensus 113 v~sl~--------------------------~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---- 160 (388)
T 1xip_A 113 LEELS--------------------------EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---- 160 (388)
T ss_dssp SSSTT--------------------------CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----
T ss_pred chhhh--------------------------ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----
Confidence 87542 12234456667888777654 38889999999999999887654
Q ss_pred CCCCCeEEEEEcCCCc-ccCCCeEEEEcCCC
Q psy8430 312 HDEEPHILCVSSYYSK-VSCDLFQRIQHLDC 341 (361)
Q Consensus 312 h~~~v~~~~~s~s~~~-v~~dg~i~iW~~d~ 341 (361)
+...|.+++++..+.. +..||.+++| +.
T Consensus 161 ~~~~Vs~v~WSpkG~~vg~~dg~i~~~--~~ 189 (388)
T 1xip_A 161 LAQNVTSFDVTNSQLAVLLKDRSFQSF--AW 189 (388)
T ss_dssp EEESEEEEEECSSEEEEEETTSCEEEE--EE
T ss_pred ccCCceEEEEcCCceEEEEcCCcEEEE--cC
Confidence 3457888888877543 3589999999 55
No 184
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.93 E-value=7.5e-07 Score=83.97 Aligned_cols=161 Identities=9% Similarity=-0.038 Sum_probs=106.5
Q ss_pred ccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC--CCeEEEEEeCCCCCeEEEEEe----cCCCEEEEE
Q psy8430 148 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ--TGKCVLQYSGHSGSVNSVRFL----PNKDLVLSA 221 (361)
Q Consensus 148 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~--~~~~~~~~~~h~~~v~~v~~~----~~~~~l~s~ 221 (361)
..+.+.+.++... ..+..+.|+|||+++++++.|+.|.+||+. +++.+..+.. ......++|+ |+|++++++
T Consensus 184 ~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~ 261 (567)
T 1qks_A 184 GSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEARSIETSKMEGWEDKYAIAG 261 (567)
T ss_dssp TTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEEEEEEECCSTTCTTTEEEEE
T ss_pred CCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCCceeEEccccCCCCCEEEEE
Confidence 3455677777643 356799999999999999999999999996 7788888874 4557899999 699988776
Q ss_pred EC-CCcEEEEeccccccccCCCCCCC-CC------C------CCCCCCCce-------------eccc----ccEEEeCC
Q psy8430 222 SG-DKSVHIWQAVINWECLNNDNDSD-LD------E------SKEPDESSI-------------TLRT----PVKELLGH 270 (361)
Q Consensus 222 ~~-d~~i~lwd~~~~~~~~~~~~~~~-~~------~------~~~~~~~~~-------------~~~~----~~~~~~~~ 270 (361)
+. ++++.++|..+.+.+........ .. . ......... .... .+..+ ..
T Consensus 262 n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~ 340 (567)
T 1qks_A 262 AYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SA 340 (567)
T ss_dssp EEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-EC
T ss_pred EccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-ec
Confidence 65 58999999877655432211100 00 0 000000000 0000 00111 12
Q ss_pred CCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCCCeEEEEeec
Q psy8430 271 SNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTG 311 (361)
Q Consensus 271 ~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~ 311 (361)
......+.|+|+|+++++++ .++.|.++|+.+++.+..+..
T Consensus 341 ~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 341 ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred cccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence 33455778999999987765 578899999999998877754
No 185
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.93 E-value=2.1e-08 Score=98.30 Aligned_cols=135 Identities=18% Similarity=0.108 Sum_probs=90.6
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCc--------
Q psy8430 160 HRDGVWDVAVRPGQPVLGSASAD-----RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS-------- 226 (361)
Q Consensus 160 h~~~V~~l~~~~~~~~l~s~s~d-----~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-------- 226 (361)
|...+..++|+|||++|+.++.+ .+|++||+.+++.+.... +...+..++|+|+ +.|+.++.|+.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 44468889999999998887654 469999999997654321 2222357899999 98888877654
Q ss_pred ------EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCC-----cE
Q psy8430 227 ------VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR-----VA 295 (361)
Q Consensus 227 ------i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-----~v 295 (361)
|.+|++.++... ...+.....+...+.++.|+|+|++|+..+.++ .|
T Consensus 239 ~~~~~~v~~~~lgt~~~~----------------------~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l 296 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSA----------------------DQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTV 296 (741)
T ss_dssp CCCCCEEEEEETTSCGGG----------------------CEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEE
T ss_pred CCCCCEEEEEECCCCchh----------------------CEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceE
Confidence 888887654210 001111122334688999999999998877544 79
Q ss_pred EEeeCCCC--eEEEEeecCCCCCeE
Q psy8430 296 NLFDVETG--TILQSLTGHDEEPHI 318 (361)
Q Consensus 296 ~iwd~~~~--~~~~~~~~h~~~v~~ 318 (361)
++||+.++ ++...+..+...+..
T Consensus 297 ~~~d~~~~~~~~~~~l~~~~~~~~~ 321 (741)
T 1yr2_A 297 HVARVTNGKIGPVTALIPDLKAQWD 321 (741)
T ss_dssp EEEEEETTEECCCEEEECSSSSCEE
T ss_pred EEEECCCCCCcccEEecCCCCceEE
Confidence 99999877 324556555544443
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.92 E-value=1e-07 Score=81.57 Aligned_cols=133 Identities=14% Similarity=0.080 Sum_probs=101.9
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCC-CCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCC
Q psy8430 172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHS-GSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDES 250 (361)
Q Consensus 172 ~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~-~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~ 250 (361)
.+++|++++.|+.|.+||..+|+.+..+..+. ..+.++.+.|+|++++ +.++.|..||. +++
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~-------------- 66 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR-------------- 66 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC--------------
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC--------------
Confidence 35699999999999999999999999998766 5789999999999988 45788999997 442
Q ss_pred CCCCCCceecccccEEEeCC-CCcEEEEEEcCCCCEEEEEeC-CCcEEEeeCCCCeEEEEeecCCC------C---Ce--
Q psy8430 251 KEPDESSITLRTPVKELLGH-SNVVIAADWLSDGEQVITASW-DRVANLFDVETGTILQSLTGHDE------E---PH-- 317 (361)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~~~~~~~~~~~h~~------~---v~-- 317 (361)
.+..+..+ ...+.++.+.|+|+++++.+. ++.|..+|. +|+.+..+..... . +.
T Consensus 67 ------------~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~ 133 (276)
T 3no2_A 67 ------------ELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKN 133 (276)
T ss_dssp ------------EEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEEC
T ss_pred ------------EEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceEC
Confidence 33334433 346888999999999999887 778888886 6887776652111 1 11
Q ss_pred ---EEEEEcCCCcccCCCeEEEEcCCC
Q psy8430 318 ---ILCVSSYYSKVSCDLFQRIQHLDC 341 (361)
Q Consensus 318 ---~~~~s~s~~~v~~dg~i~iW~~d~ 341 (361)
.++++.. .++.|..| |.
T Consensus 134 ~~G~~lv~~~-----~~~~v~~~--d~ 153 (276)
T 3no2_A 134 KKGNYLVPLF-----ATSEVREI--AP 153 (276)
T ss_dssp TTSCEEEEET-----TTTEEEEE--CT
T ss_pred CCCCEEEEec-----CCCEEEEE--CC
Confidence 1667777 88999999 66
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.89 E-value=9.5e-08 Score=82.52 Aligned_cols=159 Identities=13% Similarity=-0.005 Sum_probs=107.0
Q ss_pred eEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430 154 IRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA 232 (361)
Q Consensus 154 ~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~ 232 (361)
+..+..+.....+++|+|+|+ +++++..++.|..||..++ ...+..+...+.+++++|+++++++...++.|.+||.
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECS
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcC
Confidence 345556777889999999998 7888888999999999877 5667778888999999999998887777889999998
Q ss_pred cccccccCCCCCCCCCCCCCCCCCceecccccEEEeC-CCCcEEEEEEcCCCCEEEEE----e-------------CCCc
Q psy8430 233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVITA----S-------------WDRV 294 (361)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~----~-------------~d~~ 294 (361)
.++.... ......+ ....+..++++|+|+++++. + ..+.
T Consensus 98 ~~g~~~~-----------------------~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~ 154 (296)
T 3e5z_A 98 PGGEWES-----------------------IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRW 154 (296)
T ss_dssp TTCCEEE-----------------------EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCE
T ss_pred CCCcEEE-----------------------EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcE
Confidence 6552100 0000111 12346678999999988873 2 1345
Q ss_pred EEEeeCCCCeEEEEeecCCCCCeEEEEEcCCCc-c--cCCCeEEEEcCCC
Q psy8430 295 ANLFDVETGTILQSLTGHDEEPHILCVSSYYSK-V--SCDLFQRIQHLDC 341 (361)
Q Consensus 295 v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~~~-v--~~dg~i~iW~~d~ 341 (361)
|..+|.. ++. ..+..+......+.+++.... + ..++.|.+| |+
T Consensus 155 l~~~~~~-g~~-~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~--~~ 200 (296)
T 3e5z_A 155 VFRLAPD-GTL-SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRY--CL 200 (296)
T ss_dssp EEEECTT-SCE-EEEECCCSSEEEEEECTTSCEEEEETTTTEEEEE--EE
T ss_pred EEEECCC-CCE-EEeecCCCCCccEEECCCCCEEEEeCCCCeEEEE--EE
Confidence 6666655 443 334444444444444433111 1 267899999 55
No 188
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.88 E-value=9.8e-08 Score=84.21 Aligned_cols=100 Identities=10% Similarity=0.111 Sum_probs=73.1
Q ss_pred CCeEEEEEcCCCCEEEEEeCC---C--cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECC------------
Q psy8430 162 DGVWDVAVRPGQPVLGSASAD---R--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD------------ 224 (361)
Q Consensus 162 ~~V~~l~~~~~~~~l~s~s~d---~--~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d------------ 224 (361)
..+..+.|+|||+.|+.++.+ + .|.+|++.+++.......+ . +..++|+|+|+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 568889999999988887754 2 4888899888766555533 3 9999999999988887642
Q ss_pred ---------------CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE
Q psy8430 225 ---------------KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA 289 (361)
Q Consensus 225 ---------------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 289 (361)
..|.+||+.++. ....+.. . .+..+.|+|+| +++++
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~--------------------------~~~~l~~-~-~~~~~~~spdg-~~~~~ 187 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEE--------------------------VIEEFEK-P-RFSSGIWHRDK-IVVNV 187 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTE--------------------------EEEEEEE-E-TTCEEEEETTE-EEEEE
T ss_pred cceeecCcccccCccceEEEEECCCCe--------------------------EEeeecC-C-CcccccCCCCe-EEEEE
Confidence 468888876552 1122332 2 67788999999 88877
Q ss_pred eCC
Q psy8430 290 SWD 292 (361)
Q Consensus 290 ~~d 292 (361)
+.+
T Consensus 188 ~~~ 190 (347)
T 2gop_A 188 PHR 190 (347)
T ss_dssp ECC
T ss_pred ecc
Confidence 654
No 189
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.88 E-value=4e-08 Score=88.20 Aligned_cols=126 Identities=11% Similarity=0.072 Sum_probs=84.5
Q ss_pred eeccCCCeEEEEEcC-CCCEEEEEeCC------CcEEEEeCCCCeEEEEEeCC--CCCeEEEEEecCCCEEEEEECC---
Q psy8430 157 FSGHRDGVWDVAVRP-GQPVLGSASAD------RTVRLWSTQTGKCVLQYSGH--SGSVNSVRFLPNKDLVLSASGD--- 224 (361)
Q Consensus 157 l~~h~~~V~~l~~~~-~~~~l~s~s~d------~~i~~wd~~~~~~~~~~~~h--~~~v~~v~~~~~~~~l~s~~~d--- 224 (361)
+..+...+..+.|+| ++..|+.++.+ ..|.+||+..+.... +..+ ...+..++|+|+|+.|+.++.+
T Consensus 183 ~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 261 (396)
T 3c5m_A 183 IHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQ 261 (396)
T ss_dssp EEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCCTTEEEEEEEECTTSSCEEEEEEETTT
T ss_pred eccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccCCCccccceEECCCCCEEEEEecCCCC
Confidence 335778899999999 78877766543 368889987665333 3323 2358889999999987776544
Q ss_pred --CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEe-----------
Q psy8430 225 --KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITAS----------- 290 (361)
Q Consensus 225 --~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~----------- 290 (361)
+.|.+||+.++.. ..+.... ... +.|+| +|+++++++
T Consensus 262 ~~~~l~~~d~~~g~~---------------------------~~l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 262 TDRVIYKANPETLEN---------------------------EEVMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADAD 312 (396)
T ss_dssp CCEEEEEECTTTCCE---------------------------EEEEECC-SEE-EEEECSSSSEEEEEECCC--------
T ss_pred ccceEEEEECCCCCe---------------------------EEeeeCC-CCC-CCccCCCCceEEEecCCcceeecccc
Confidence 4499999876521 1111111 122 78999 999888765
Q ss_pred -----CCCcEEEeeCCCCeEEEEeecCC
Q psy8430 291 -----WDRVANLFDVETGTILQSLTGHD 313 (361)
Q Consensus 291 -----~d~~v~iwd~~~~~~~~~~~~h~ 313 (361)
.++.|++||+.+++.. .+..+.
T Consensus 313 ~~~~~~~~~i~~~d~~~~~~~-~l~~~~ 339 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKAKSAQ-KLCKHS 339 (396)
T ss_dssp --CCCCCCEEEEEETTTTBCC-EEEECC
T ss_pred ccccCCCCcEEEEecccCceE-EccCCC
Confidence 3477999999887643 444443
No 190
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.87 E-value=3.7e-07 Score=80.08 Aligned_cols=154 Identities=12% Similarity=0.085 Sum_probs=99.2
Q ss_pred eccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecCCCEEEEEEC------CC
Q psy8430 158 SGHRDGVWDVAVRPGQPVLGSASAD----RTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASG------DK 225 (361)
Q Consensus 158 ~~h~~~V~~l~~~~~~~~l~s~s~d----~~i~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~------d~ 225 (361)
..+...+.+++++|+|.+++++..+ +.|.+||..++.....+. .+...+.+++++|+++++++... .+
T Consensus 83 ~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 162 (333)
T 2dg1_A 83 VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLG 162 (333)
T ss_dssp ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCE
T ss_pred eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCc
Confidence 3567889999999999988887766 689999998776543333 24567999999999988877654 24
Q ss_pred cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEE-EeCCCcEEEeeCCC-C
Q psy8430 226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT-ASWDRVANLFDVET-G 303 (361)
Q Consensus 226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~d~~v~iwd~~~-~ 303 (361)
.|..+|..++ ....+..+...+..++|+|+|++++. .+.++.|.+||+.+ +
T Consensus 163 ~l~~~~~~~~---------------------------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g 215 (333)
T 2dg1_A 163 GVYYVSPDFR---------------------------TVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDG 215 (333)
T ss_dssp EEEEECTTSC---------------------------CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred eEEEEeCCCC---------------------------EEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCC
Confidence 4555554322 11122223345788999999986654 45678999999863 3
Q ss_pred eEEEE--------eecCCCCCeEEEEEcCC-Cccc--CCCeEEEEcCCC
Q psy8430 304 TILQS--------LTGHDEEPHILCVSSYY-SKVS--CDLFQRIQHLDC 341 (361)
Q Consensus 304 ~~~~~--------~~~h~~~v~~~~~s~s~-~~v~--~dg~i~iW~~d~ 341 (361)
..+.. +.++ ..+..+++...+ +.++ .++.|.+| |.
T Consensus 216 ~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~--d~ 261 (333)
T 2dg1_A 216 VTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVF--NK 261 (333)
T ss_dssp SSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEE--CT
T ss_pred cCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEE--CC
Confidence 32221 1111 233344444331 2222 47889999 65
No 191
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.86 E-value=1.7e-07 Score=82.41 Aligned_cols=165 Identities=8% Similarity=-0.114 Sum_probs=112.6
Q ss_pred cceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCC-----CCeEEEEEecCCCEEEEEE-
Q psy8430 149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHS-----GSVNSVRFLPNKDLVLSAS- 222 (361)
Q Consensus 149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~-----~~v~~v~~~~~~~~l~s~~- 222 (361)
.+++.+.++.. ......+++++++.++++...++.|.+||..+++....+.... .....+++ .++.++++..
T Consensus 72 ~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~ 149 (328)
T 3dsm_A 72 NTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWS 149 (328)
T ss_dssp TTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECT
T ss_pred cccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCC
Confidence 45666677753 4678899999988555555489999999999998877776322 15667777 4444444443
Q ss_pred CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC----------
Q psy8430 223 GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD---------- 292 (361)
Q Consensus 223 ~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---------- 292 (361)
.++.|.+||+.++.. ...+.. ......+.++|+|++++++..+
T Consensus 150 ~~~~v~viD~~t~~~--------------------------~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~ 202 (328)
T 3dsm_A 150 YQNRILKIDTETDKV--------------------------VDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEA 202 (328)
T ss_dssp TCCEEEEEETTTTEE--------------------------EEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCC
T ss_pred CCCEEEEEECCCCeE--------------------------EEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCC
Confidence 488999999876632 222322 2234578899999977777655
Q ss_pred CcEEEeeCCCCeEEEEeecCC-CCCeEEEEEcC--CCcccCCCeEEEEcCCCCCCC
Q psy8430 293 RVANLFDVETGTILQSLTGHD-EEPHILCVSSY--YSKVSCDLFQRIQHLDCGTSE 345 (361)
Q Consensus 293 ~~v~iwd~~~~~~~~~~~~h~-~~v~~~~~s~s--~~~v~~dg~i~iW~~d~~~~~ 345 (361)
+.|.+||..+++...++.... .....+.+++. .++++. +.|.+| |..++.
T Consensus 203 ~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~-~~v~~~--d~~t~~ 255 (328)
T 3dsm_A 203 PSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN-NDIWRM--PVEADR 255 (328)
T ss_dssp CEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES-SSEEEE--ETTCSS
T ss_pred ceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc-cEEEEE--ECCCCc
Confidence 789999999999887776432 35666778754 334443 388888 664443
No 192
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.86 E-value=4.3e-09 Score=94.64 Aligned_cols=151 Identities=9% Similarity=-0.091 Sum_probs=95.8
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEE-------------------EEEecCCCEEEEE---
Q psy8430 164 VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNS-------------------VRFLPNKDLVLSA--- 221 (361)
Q Consensus 164 V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~-------------------v~~~~~~~~l~s~--- 221 (361)
...+.|+|+|+.|+.++.++.|.+||+.+++....+..+...... +.|+|+++.++.+
T Consensus 83 ~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 162 (396)
T 3c5m_A 83 TFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFY 162 (396)
T ss_dssp TTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHH
T ss_pred cccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeec
Confidence 334789999999999999999999999988776666545442222 2455666654433
Q ss_pred --ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCC------
Q psy8430 222 --SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWD------ 292 (361)
Q Consensus 222 --~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d------ 292 (361)
..+..|.+||+.++ ....+..+...+..+.|+| ++..++.++.+
T Consensus 163 ~~~~~~~l~~~d~~~g---------------------------~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~ 215 (396)
T 3c5m_A 163 HTNPTCRLIKVDIETG---------------------------ELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVD 215 (396)
T ss_dssp HTCCCEEEEEEETTTC---------------------------CEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCS
T ss_pred cCCCcceEEEEECCCC---------------------------cEEeeccCCcccccceECCCCCCEEEEEecCCCCCCC
Confidence 34567888887654 1223334566788999999 88877776543
Q ss_pred CcEEEeeCCCCeEEEEeecCC--CCCeEEEEEcCCC---cccCC-----CeEEEEcCCCCCC
Q psy8430 293 RVANLFDVETGTILQSLTGHD--EEPHILCVSSYYS---KVSCD-----LFQRIQHLDCGTS 344 (361)
Q Consensus 293 ~~v~iwd~~~~~~~~~~~~h~--~~v~~~~~s~s~~---~v~~d-----g~i~iW~~d~~~~ 344 (361)
..|.+||+..+.. ..+..+. ..+..+.+++++. +++.+ +.|++| |+.++
T Consensus 216 ~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~--d~~~g 274 (396)
T 3c5m_A 216 ARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKA--NPETL 274 (396)
T ss_dssp CCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEE--CTTTC
T ss_pred ceEEEEECCCCce-eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEE--ECCCC
Confidence 3588899876543 3333332 1344455555422 12122 459999 76443
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.85 E-value=6.6e-08 Score=94.00 Aligned_cols=149 Identities=6% Similarity=-0.090 Sum_probs=96.8
Q ss_pred EEEEEcCCCCEEEEEeCCCc-------------EEEEeCCCCe----EEEEEeCCCCCeEEEEEecCCCEEEEEECCC--
Q psy8430 165 WDVAVRPGQPVLGSASADRT-------------VRLWSTQTGK----CVLQYSGHSGSVNSVRFLPNKDLVLSASGDK-- 225 (361)
Q Consensus 165 ~~l~~~~~~~~l~s~s~d~~-------------i~~wd~~~~~----~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~-- 225 (361)
..++|+|||+.|+.++.|.. |++|++.++. .+.....|...+..+.|+|+|++++.++.++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 67899999999999999876 9999998875 2333334557889999999999988777655
Q ss_pred --cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe---CCCcEEEeeC
Q psy8430 226 --SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS---WDRVANLFDV 300 (361)
Q Consensus 226 --~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~d~~v~iwd~ 300 (361)
.|.+|+..++ ....+..+...+....+ ++|.+++.+. .++.|.+||+
T Consensus 251 ~~~l~~~~~~~~---------------------------~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~ 302 (695)
T 2bkl_A 251 ENDVYWKRPGEK---------------------------DFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDP 302 (695)
T ss_dssp EEEEEEECTTCS---------------------------SCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBT
T ss_pred ceEEEEEcCCCC---------------------------ceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeC
Confidence 5556654322 23445555555666666 5666444443 2578999999
Q ss_pred CCCeE--EEEeecC--CCCCeEEEEEcCCC--cccCCCeEEEEcCCC
Q psy8430 301 ETGTI--LQSLTGH--DEEPHILCVSSYYS--KVSCDLFQRIQHLDC 341 (361)
Q Consensus 301 ~~~~~--~~~~~~h--~~~v~~~~~s~s~~--~v~~dg~i~iW~~d~ 341 (361)
.++.. ...+..+ ...+..+.++.+.+ ....|+..+||.++.
T Consensus 303 ~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~ 349 (695)
T 2bkl_A 303 AKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATL 349 (695)
T ss_dssp TBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEET
T ss_pred CCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeC
Confidence 87753 2344433 33344433332211 112899999995554
No 194
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.81 E-value=2e-07 Score=79.08 Aligned_cols=151 Identities=10% Similarity=-0.091 Sum_probs=101.4
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccC
Q psy8430 161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLN 240 (361)
Q Consensus 161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~ 240 (361)
...+.+++++++|.++++...++.|.+|+..+.............+.+++++++++++++...++.|.+||.......
T Consensus 107 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-- 184 (270)
T 1rwi_B 107 LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV-- 184 (270)
T ss_dssp CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE--
T ss_pred cCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE--
Confidence 367899999999998888778899999986655433322233356789999999998877777889999997643110
Q ss_pred CCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeEEE
Q psy8430 241 NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILC 320 (361)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~~~ 320 (361)
.....+...+.+++++++|..+++...++.|.+||............+-..+..+.
T Consensus 185 ------------------------~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~ 240 (270)
T 1rwi_B 185 ------------------------VLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVA 240 (270)
T ss_dssp ------------------------ECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEE
T ss_pred ------------------------eecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEE
Confidence 01112235678999999998777777788999999876543322222223344444
Q ss_pred EEcCC-Ccc--cCCCeEEEE
Q psy8430 321 VSSYY-SKV--SCDLFQRIQ 337 (361)
Q Consensus 321 ~s~s~-~~v--~~dg~i~iW 337 (361)
+++.+ +++ ..++.|+++
T Consensus 241 ~~~~g~l~v~~~~~~~v~~~ 260 (270)
T 1rwi_B 241 VDSDRTVYVADRGNDRVVKL 260 (270)
T ss_dssp ECTTCCEEEEEGGGTEEEEE
T ss_pred ECCCCCEEEEECCCCEEEEE
Confidence 44331 111 267888888
No 195
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.78 E-value=8.1e-07 Score=76.80 Aligned_cols=141 Identities=16% Similarity=0.102 Sum_probs=96.7
Q ss_pred CCeEEEEEcCCCCEEEEEeCC---------CcEEEEeCCC-CeEEEEEeCCCCCeEEEEEecCCCEEE-EEECCCcEEEE
Q psy8430 162 DGVWDVAVRPGQPVLGSASAD---------RTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW 230 (361)
Q Consensus 162 ~~V~~l~~~~~~~~l~s~s~d---------~~i~~wd~~~-~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d~~i~lw 230 (361)
..+++++++|+|+++++...+ ....+|.+.. ++... +..+....+.++|+|+++.++ +.+.++.|.+|
T Consensus 98 ~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~ 176 (297)
T 3g4e_A 98 NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAF 176 (297)
T ss_dssp EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEE
T ss_pred CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEEEecCCCCcEEEE
Confidence 447889999999977765322 2345555543 33332 333445678999999998664 55567889999
Q ss_pred ecc--ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430 231 QAV--INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS 308 (361)
Q Consensus 231 d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 308 (361)
++. ++. .........+..+......++++++|.+.++....+.|.+||..+|+.+..
T Consensus 177 ~~d~~~G~---------------------~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~ 235 (297)
T 3g4e_A 177 DYDLQTGQ---------------------ISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQT 235 (297)
T ss_dssp EECTTTCC---------------------EEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEE
T ss_pred eccCCCCc---------------------ccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEE
Confidence 873 221 111112223333445778999999998888888888999999999999999
Q ss_pred eecCCCCCeEEEEEcC
Q psy8430 309 LTGHDEEPHILCVSSY 324 (361)
Q Consensus 309 ~~~h~~~v~~~~~s~s 324 (361)
+..+...++++++.+.
T Consensus 236 i~~p~~~~t~~~f~g~ 251 (297)
T 3g4e_A 236 VKLPVDKTTSCCFGGK 251 (297)
T ss_dssp EECSSSBEEEEEEESG
T ss_pred EECCCCCceEEEEeCC
Confidence 9887777788777754
No 196
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.76 E-value=1.6e-07 Score=91.29 Aligned_cols=135 Identities=12% Similarity=0.072 Sum_probs=89.0
Q ss_pred ccCCCeEEEEEcCCCCEEEEE-----eCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCc-------
Q psy8430 159 GHRDGVWDVAVRPGQPVLGSA-----SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS------- 226 (361)
Q Consensus 159 ~h~~~V~~l~~~~~~~~l~s~-----s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~------- 226 (361)
+|...+..++|||||++|+-+ +.+.+|++||+.+|+.+.... +......++|+ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 455678889999999988843 233579999999998654311 11113567899 9999998887743
Q ss_pred ------EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC-CCCcEEEEEEcCCCCEEEEEeC----CCcE
Q psy8430 227 ------VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVITASW----DRVA 295 (361)
Q Consensus 227 ------i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~----d~~v 295 (361)
|.+|++.++... ...+..... |.....++.|+|+|++|+.... ++.|
T Consensus 204 ~~~~~~v~~~~lgt~~~~----------------------~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i 261 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQED----------------------DRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRL 261 (693)
T ss_dssp -CCCCEEEEEETTSCGGG----------------------CEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEE
T ss_pred cCCCcEEEEEECCCCccc----------------------ceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEE
Confidence 888988654210 011222222 3445788999999999865443 2579
Q ss_pred EEeeCCCCe-EEEEeecCCCCCe
Q psy8430 296 NLFDVETGT-ILQSLTGHDEEPH 317 (361)
Q Consensus 296 ~iwd~~~~~-~~~~~~~h~~~v~ 317 (361)
+++|+.++. ....+..+.....
T Consensus 262 ~~~d~~~~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 262 YVKDLSQENAPLLTVQGDLDADV 284 (693)
T ss_dssp EEEETTSTTCCCEEEECSSSSCE
T ss_pred EEEECCCCCCceEEEeCCCCceE
Confidence 999998763 3455655554443
No 197
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.75 E-value=4.2e-07 Score=85.68 Aligned_cols=143 Identities=13% Similarity=-0.010 Sum_probs=105.1
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecc--ccccccCCCCCCCC
Q psy8430 170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV--INWECLNNDNDSDL 247 (361)
Q Consensus 170 ~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~--~~~~~~~~~~~~~~ 247 (361)
+|.+.++++...+++|.++|..+++.+..+. ....+..+.|+|+++++++++.|+.|.+||+. +.
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~-~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~------------ 230 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLD-TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP------------ 230 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC------------
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEe-CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC------------
Confidence 3445577788889999999999999888887 45577899999999999999999999999984 33
Q ss_pred CCCCCCCCCceecccccEEEeCCCCcEEEEEEc----CCCCEEEEEeCC-CcEEEeeCCCCeEEEEeecCC---------
Q psy8430 248 DESKEPDESSITLRTPVKELLGHSNVVIAADWL----SDGEQVITASWD-RVANLFDVETGTILQSLTGHD--------- 313 (361)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~s~~~d-~~v~iwd~~~~~~~~~~~~h~--------- 313 (361)
+.+..+... .....++|+ |+|+++++++.. +.|.++|..+.+.+.++....
T Consensus 231 --------------~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~ 295 (567)
T 1qks_A 231 --------------TTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYH 295 (567)
T ss_dssp --------------CEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEE
T ss_pred --------------cEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccccccccc
Confidence 134445432 346789999 699999887764 889999999999988775321
Q ss_pred -C-CCeEEEEEcCC----CcccCCCeEEEEcCCCC
Q psy8430 314 -E-EPHILCVSSYY----SKVSCDLFQRIQHLDCG 342 (361)
Q Consensus 314 -~-~v~~~~~s~s~----~~v~~dg~i~iW~~d~~ 342 (361)
. .+..+.++... ..+..+|.|.++ |..
T Consensus 296 p~~rva~i~~s~~~~~~vv~~~~~g~v~~v--d~~ 328 (567)
T 1qks_A 296 PEPRVAAILASHYRPEFIVNVKETGKILLV--DYT 328 (567)
T ss_dssp SCCCEEEEEECSSSSEEEEEETTTTEEEEE--ETT
T ss_pred CCCceEEEEEcCCCCEEEEEecCCCeEEEE--ecC
Confidence 2 23334443321 112367888888 663
No 198
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.72 E-value=4.2e-07 Score=77.07 Aligned_cols=152 Identities=9% Similarity=-0.081 Sum_probs=102.5
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe-CCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccc
Q psy8430 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC 238 (361)
Q Consensus 160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~ 238 (361)
+...+.+++++++|.++++.. ++.|.+||...... ..+. .....+.+++++|+++++++...++.|.+|+..+...
T Consensus 65 ~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~- 141 (270)
T 1rwi_B 65 GLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ- 141 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC-
T ss_pred CcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee-
Confidence 345688999999998766666 88999999876543 2333 2336789999999999888877788999997543211
Q ss_pred cCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCCCeE
Q psy8430 239 LNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI 318 (361)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~v~~ 318 (361)
..........+..++++++|+.+++...++.|.+||...+........+...+..
T Consensus 142 -------------------------~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~ 196 (270)
T 1rwi_B 142 -------------------------TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWG 196 (270)
T ss_dssp -------------------------EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEE
T ss_pred -------------------------EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceE
Confidence 0001122335678899999997777777889999998876654433333234445
Q ss_pred EEEEcC-CCccc--CCCeEEEEcCCC
Q psy8430 319 LCVSSY-YSKVS--CDLFQRIQHLDC 341 (361)
Q Consensus 319 ~~~s~s-~~~v~--~dg~i~iW~~d~ 341 (361)
+.+... .++++ .++.|.+| |.
T Consensus 197 i~~d~~g~l~v~~~~~~~v~~~--~~ 220 (270)
T 1rwi_B 197 IAVDEAGTVYVTEHNTNQVVKL--LA 220 (270)
T ss_dssp EEECTTCCEEEEETTTSCEEEE--CT
T ss_pred EEECCCCCEEEEECCCCcEEEE--cC
Confidence 555443 22332 47889999 55
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.71 E-value=8.6e-07 Score=76.86 Aligned_cols=155 Identities=13% Similarity=0.039 Sum_probs=105.7
Q ss_pred CCeEEEEEcCCCCEEEEEeCC---------------CcEEEEeCCCCeEEEEEeCCCCCeEEEEEe----cCCCEEEEE-
Q psy8430 162 DGVWDVAVRPGQPVLGSASAD---------------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFL----PNKDLVLSA- 221 (361)
Q Consensus 162 ~~V~~l~~~~~~~~l~s~s~d---------------~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~----~~~~~l~s~- 221 (361)
..+.+++++++|+++++...+ +.|..|+.. ++..... .+......++|+ |+++.++.+
T Consensus 117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEE
Confidence 458899999999988877655 567777765 5543332 344567899999 998765444
Q ss_pred ECCCcEEEEeccc-cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCC-CcEEEEEEcCCCCEEEEEeCCCcEEEee
Q psy8430 222 SGDKSVHIWQAVI-NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHS-NVVIAADWLSDGEQVITASWDRVANLFD 299 (361)
Q Consensus 222 ~~d~~i~lwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~d~~v~iwd 299 (361)
..++.|.+||+.. +. .........+.++. ..+..++++++|.++++...++.|.+||
T Consensus 195 ~~~~~i~~~~~~~~g~---------------------~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d 253 (314)
T 1pjx_A 195 TPTKKLWSYDIKGPAK---------------------IENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFG 253 (314)
T ss_dssp TTTTEEEEEEEEETTE---------------------EEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred CCCCeEEEEECCCCCc---------------------cccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEc
Confidence 5678999999752 21 00011222233343 5678899999999888888889999999
Q ss_pred CCCCeEEEEeecCCCCCeEEEEEcCC--Cccc--CCCeEEEEcCCC
Q psy8430 300 VETGTILQSLTGHDEEPHILCVSSYY--SKVS--CDLFQRIQHLDC 341 (361)
Q Consensus 300 ~~~~~~~~~~~~h~~~v~~~~~s~s~--~~v~--~dg~i~iW~~d~ 341 (361)
..+++.+..+..+...+.++.++... ++++ .++.|..| ++
T Consensus 254 ~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~--~~ 297 (314)
T 1pjx_A 254 PDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKF--EW 297 (314)
T ss_dssp TTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEE--EC
T ss_pred CCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEE--eC
Confidence 98888777777666666666664442 2332 45688888 55
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.63 E-value=2.8e-06 Score=83.12 Aligned_cols=152 Identities=13% Similarity=0.021 Sum_probs=97.2
Q ss_pred eEEEEEcCCCCEEEEEeCCCc--------------EEEEeCCCCe--EEEEEeC--CCCCeEEEEEecCCCEEEEEECCC
Q psy8430 164 VWDVAVRPGQPVLGSASADRT--------------VRLWSTQTGK--CVLQYSG--HSGSVNSVRFLPNKDLVLSASGDK 225 (361)
Q Consensus 164 V~~l~~~~~~~~l~s~s~d~~--------------i~~wd~~~~~--~~~~~~~--h~~~v~~v~~~~~~~~l~s~~~d~ 225 (361)
+..++|+|| +.|+.++.|+. |++|++.++. ....+.. +...+..+.|+|+|++++..+.++
T Consensus 211 ~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 289 (741)
T 1yr2_A 211 FSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG 289 (741)
T ss_dssp SCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT
T ss_pred eccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc
Confidence 357889999 98888887664 8899997764 2333433 334689999999999888776543
Q ss_pred -----cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC----CcEE
Q psy8430 226 -----SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD----RVAN 296 (361)
Q Consensus 226 -----~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----~~v~ 296 (361)
.|.+||+.++.. .+...+..+...+... ++|+|+.|+..+.+ +.|.
T Consensus 290 ~~~~~~l~~~d~~~~~~------------------------~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~ 344 (741)
T 1yr2_A 290 TDPVNTVHVARVTNGKI------------------------GPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIV 344 (741)
T ss_dssp TCSCCEEEEEEEETTEE------------------------CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEE
T ss_pred CCCcceEEEEECCCCCC------------------------cccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEE
Confidence 788998764310 0134455555545444 34889988888764 4499
Q ss_pred EeeCCCC--eEEEEeecCCCCCeEEEEEcCCCc--ccCCCeEEEEcCCC
Q psy8430 297 LFDVETG--TILQSLTGHDEEPHILCVSSYYSK--VSCDLFQRIQHLDC 341 (361)
Q Consensus 297 iwd~~~~--~~~~~~~~h~~~v~~~~~s~s~~~--v~~dg~i~iW~~d~ 341 (361)
+||+.++ .....+..+...+..+.++++.+. ...|+..+||.+|.
T Consensus 345 ~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~ 393 (741)
T 1yr2_A 345 RVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDL 393 (741)
T ss_dssp EEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEET
T ss_pred EEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeC
Confidence 9999875 333333444444444333333211 12789888885554
No 201
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.61 E-value=2.9e-06 Score=74.43 Aligned_cols=120 Identities=14% Similarity=0.018 Sum_probs=85.6
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCC
Q psy8430 162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNN 241 (361)
Q Consensus 162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~ 241 (361)
.....+.+.. +.++++...++.|.+||..+++.+..+. .......+++++++..+++...++.|.+||+.++..
T Consensus 44 ~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~---- 117 (328)
T 3dsm_A 44 DVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEI---- 117 (328)
T ss_dssp SCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEE----
T ss_pred ccceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeE----
Confidence 3456777753 4466666678999999999999988886 457789999999985555555899999999876532
Q ss_pred CCCCCCCCCCCCCCCceecccccEEEeCCC-----CcEEEEEEcCCCCEEEEEe--CCCcEEEeeCCCCeEEEEeec
Q psy8430 242 DNDSDLDESKEPDESSITLRTPVKELLGHS-----NVVIAADWLSDGEQVITAS--WDRVANLFDVETGTILQSLTG 311 (361)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~ 311 (361)
...+.... .....+++ ++..++.++ .++.|.+||..+++.+.++..
T Consensus 118 ----------------------~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~ 170 (328)
T 3dsm_A 118 ----------------------TGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI 170 (328)
T ss_dssp ----------------------EEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC
T ss_pred ----------------------EEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc
Confidence 22222211 14445666 455555555 488999999999998888764
No 202
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.61 E-value=1.2e-05 Score=68.90 Aligned_cols=153 Identities=10% Similarity=0.031 Sum_probs=104.9
Q ss_pred eeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEE-eCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccc
Q psy8430 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN 235 (361)
Q Consensus 157 l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~ 235 (361)
+..+...+.+++++++|.++++...++.|.+||.. +...... ..+...+.++++++++.++++...++.|..||....
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~ 88 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGI 88 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCc
Confidence 34566789999999999988877778999999988 6533222 235678999999999998888777889999986411
Q ss_pred ccccCCCCCCCCCCCCCCCCCceecccccEEE--eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE-eecC
Q psy8430 236 WECLNNDNDSDLDESKEPDESSITLRTPVKEL--LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS-LTGH 312 (361)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~-~~~h 312 (361)
...+ ......+..++++++|..+++...++.|.+||. +++.... ...+
T Consensus 89 ----------------------------~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~ 139 (299)
T 2z2n_A 89 ----------------------------IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK 139 (299)
T ss_dssp ----------------------------EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred ----------------------------EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCC
Confidence 1111 124457889999999988888877889999998 5654432 2222
Q ss_pred CCCCeEEEEEcC-CCccc--CCCeEEEEcCCC
Q psy8430 313 DEEPHILCVSSY-YSKVS--CDLFQRIQHLDC 341 (361)
Q Consensus 313 ~~~v~~~~~s~s-~~~v~--~dg~i~iW~~d~ 341 (361)
...+..+.+... .++++ .++.|..| |.
T Consensus 140 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~--~~ 169 (299)
T 2z2n_A 140 GSYPSFITLGSDNALWFTENQNNAIGRI--TE 169 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEE--CT
T ss_pred CCCCceEEEcCCCCEEEEeCCCCEEEEE--cC
Confidence 333444444332 11221 46788888 65
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.61 E-value=2e-05 Score=67.44 Aligned_cols=151 Identities=11% Similarity=-0.007 Sum_probs=103.9
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecCCCEEEEEECCCcEEEEecccccc
Q psy8430 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 237 (361)
Q Consensus 160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~ 237 (361)
+...+.+++++++|.++++...++.|..||.. ++. ..+. .....+.++++.+++.++++...++.|..||. ++..
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~ 131 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI 131 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE
Confidence 45779999999999988887778899999986 432 2232 34568899999999988888777889999987 3311
Q ss_pred ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE-eecCCCCC
Q psy8430 238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS-LTGHDEEP 316 (361)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~-~~~h~~~v 316 (361)
...........+..++++++|..+++...++.|..||. +++.... +..+...+
T Consensus 132 -------------------------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~ 185 (299)
T 2z2n_A 132 -------------------------REYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGP 185 (299)
T ss_dssp -------------------------EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred -------------------------EEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcc
Confidence 01111223457889999999988887777889999998 6765442 22233334
Q ss_pred eEEEEEcC-CCccc--CCCeEEEEcCCC
Q psy8430 317 HILCVSSY-YSKVS--CDLFQRIQHLDC 341 (361)
Q Consensus 317 ~~~~~s~s-~~~v~--~dg~i~iW~~d~ 341 (361)
..+.+... .++++ .++.|.+| |.
T Consensus 186 ~~i~~~~~g~l~v~~~~~~~i~~~--~~ 211 (299)
T 2z2n_A 186 VGITKGNDDALWFVEIIGNKIGRI--TT 211 (299)
T ss_dssp EEEEECTTSSEEEEETTTTEEEEE--CT
T ss_pred eeEEECCCCCEEEEccCCceEEEE--CC
Confidence 44444433 22332 46788888 65
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.61 E-value=1.3e-05 Score=72.61 Aligned_cols=151 Identities=18% Similarity=0.106 Sum_probs=101.1
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCC--cEEEEecccccccc
Q psy8430 162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK--SVHIWQAVINWECL 239 (361)
Q Consensus 162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~--~i~lwd~~~~~~~~ 239 (361)
.....++|+++++++++...++.|++||..++........ ..... ++|+|+++.++.+..++ .|.+|+...+...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~- 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP- 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE-
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee-
Confidence 4688999999999888888889999999988876555443 33344 99999999998888766 7888876543110
Q ss_pred CCCCCCCCCCCCCCCCCceecccccEEEeC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE----eecCCC
Q psy8430 240 NNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS----LTGHDE 314 (361)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~----~~~h~~ 314 (361)
.....+.. ....+.+++++|++..|+.+..++.|+.||..++..... ..++..
T Consensus 208 ----------------------~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~ 265 (409)
T 3hrp_A 208 ----------------------TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLG 265 (409)
T ss_dssp ----------------------EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCC
T ss_pred ----------------------EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCC
Confidence 00111112 345677899999655666677789999999987764322 222222
Q ss_pred CC-e-EEEEEcC--CCcc--cCCCeEEEE
Q psy8430 315 EP-H-ILCVSSY--YSKV--SCDLFQRIQ 337 (361)
Q Consensus 315 ~v-~-~~~~s~s--~~~v--~~dg~i~iW 337 (361)
.. . .+.+++. .+++ ..++.|+.|
T Consensus 266 ~~P~~~ia~~p~~g~lyv~d~~~~~I~~~ 294 (409)
T 3hrp_A 266 TNPGPYLIYYFVDSNFYMSDQNLSSVYKI 294 (409)
T ss_dssp CSSCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCccccEEEeCCCCEEEEEeCCCCEEEEE
Confidence 22 2 5566652 2233 367888888
No 205
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.58 E-value=6.9e-09 Score=92.92 Aligned_cols=140 Identities=16% Similarity=0.082 Sum_probs=73.6
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCC
Q psy8430 172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESK 251 (361)
Q Consensus 172 ~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~ 251 (361)
++..+++++.|+.|..||..+|+.+..+.. +.+.+..+..++..+++++.|+.|..||..+++.......
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~-------- 77 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPF-------- 77 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSC--------
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeec--------
Confidence 467899999999999999999999888875 5566655666777888888999999999977643211000
Q ss_pred CCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCC----CeEEEEEcCCCc
Q psy8430 252 EPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE----PHILCVSSYYSK 327 (361)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~----v~~~~~s~s~~~ 327 (361)
...... ...++ +. .+..+++++.|+.++.||..+|+.+..+..+... ....++.++
T Consensus 78 -----------~~~~~~-~~sp~----~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~~~~p~~~~v~~~~--- 137 (369)
T 2hz6_A 78 -----------TIPELV-QASPC----RS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFADSLSPSTSLLYLGR--- 137 (369)
T ss_dssp -----------CHHHHH-TTCSC----C------CCCCEEEEEEEEECCC----------------------EEEEE---
T ss_pred -----------cCcccc-ccCce----Ee-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCcccccccCCEEEEEe---
Confidence 000000 01111 11 3446677777888888888888877666544311 112555566
Q ss_pred ccCCCeEEEEcCCCCCCC
Q psy8430 328 VSCDLFQRIQHLDCGTSE 345 (361)
Q Consensus 328 v~~dg~i~iW~~d~~~~~ 345 (361)
.|+.|+.| |..+++
T Consensus 138 --~dg~v~a~--d~~tG~ 151 (369)
T 2hz6_A 138 --TEYTITMY--DTKTRE 151 (369)
T ss_dssp --EEEEEECC--CSSSSS
T ss_pred --cCCEEEEE--ECCCCC
Confidence 78888888 765554
No 206
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.57 E-value=1.8e-06 Score=76.77 Aligned_cols=144 Identities=13% Similarity=0.084 Sum_probs=100.2
Q ss_pred EEcCCCCEEEEEeC-----CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE----------CCCcEEEEec
Q psy8430 168 AVRPGQPVLGSASA-----DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------GDKSVHIWQA 232 (361)
Q Consensus 168 ~~~~~~~~l~s~s~-----d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~d~~i~lwd~ 232 (361)
...|++..++.... ++.|.+.|..+++.+..+..-..+ . ++++|+|+.++.++ .++.|.+||.
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 34688887777765 679999999999999988754444 4 99999999887765 3678999998
Q ss_pred cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCC-------CCcEEEEEEcCCCCEEEEEeC--CCcEEEeeCCCC
Q psy8430 233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGH-------SNVVIAADWLSDGEQVITASW--DRVANLFDVETG 303 (361)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~s~~~--d~~v~iwd~~~~ 303 (361)
.+.. .+..+... ......+.|+|+|++++.+.. ++.|.++|+.++
T Consensus 117 ~t~~--------------------------v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~ 170 (386)
T 3sjl_D 117 VTLL--------------------------PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK 170 (386)
T ss_dssp TTCC--------------------------EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred CCCe--------------------------EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC
Confidence 7763 23333211 123456889999999998874 689999999999
Q ss_pred eEEEEeecCCCCCeEEEEEcC--CCcccCCCeEEEEcCCCCC
Q psy8430 304 TILQSLTGHDEEPHILCVSSY--YSKVSCDLFQRIQHLDCGT 343 (361)
Q Consensus 304 ~~~~~~~~h~~~v~~~~~s~s--~~~v~~dg~i~iW~~d~~~ 343 (361)
+.+.++..... ..+.-.+. +..++.||.+-+. ++.+
T Consensus 171 ~vv~tI~v~g~--~~~~P~g~~~~~~~~~DG~~~~v--~~~~ 208 (386)
T 3sjl_D 171 AFKRMLDVPDC--YHIFPTAPDTFFMHCRDGSLAKV--AFGT 208 (386)
T ss_dssp EEEEEEECCSE--EEEEEEETTEEEEEETTSCEEEE--ECCS
T ss_pred cEEEEEECCCc--ceeecCCCceeEEECCCCCEEEE--ECCC
Confidence 99998864221 11000010 1123378888888 6643
No 207
>1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1
Probab=98.57 E-value=5.2e-09 Score=69.91 Aligned_cols=76 Identities=13% Similarity=0.048 Sum_probs=62.8
Q ss_pred ccccc--cccccceeecccchhhhHHHhhcCCcCCcccCChhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhcc
Q psy8430 10 KSTKH--KRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLD 87 (361)
Q Consensus 10 ~~~~~--~~~~~~~~~~l~~~~~~~~~~~L~~e~~~~~~~~~~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~ 87 (361)
+||+| +||+|.|++||...+++.++++|+.|.+... +++...+ ++.-++++|..+.+||+|+.+|+.+..
T Consensus 4 iLt~rQ~eEL~kaI~~YL~~~~~~~~~~alr~e~~~~~-~~~~~~k-------y~gLLEKKWTSViRLQKKImdLE~~~~ 75 (88)
T 1uuj_A 4 VLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDM-NEELDKK-------YAGLLEKKWTSVIRLQKKVMELESKLN 75 (88)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTTCCC-CHHHHHH-------HTTHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHhcCCC-Cchhhhh-------hhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 68888 8999999999999999999999999986332 2332335 888999999999999999999998877
Q ss_pred cccccc
Q psy8430 88 RESIIN 93 (361)
Q Consensus 88 ~~~~~~ 93 (361)
..+.+.
T Consensus 76 ~l~~el 81 (88)
T 1uuj_A 76 EAKEEF 81 (88)
T ss_dssp HTTC--
T ss_pred HHHHHH
Confidence 776554
No 208
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.56 E-value=4.7e-06 Score=74.48 Aligned_cols=136 Identities=9% Similarity=-0.051 Sum_probs=93.5
Q ss_pred EcCCCCEEEEEeC--CC---cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE----------CCCcEEEEecc
Q psy8430 169 VRPGQPVLGSASA--DR---TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------GDKSVHIWQAV 233 (361)
Q Consensus 169 ~~~~~~~l~s~s~--d~---~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~d~~i~lwd~~ 233 (361)
..|++.+++.+.. .. +|.+||..+++.+..+..-..+ .++++|+++.++.+. .++.|.+||+.
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 3466776666543 22 8899999999988887743333 999999999988875 36789999987
Q ss_pred ccccccCCCCCCCCCCCCCCCCCceecccccEEEeC-------CCCcEEEEEEcCCCCEEEEEeC--CCcEEEeeCCCCe
Q psy8430 234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLG-------HSNVVIAADWLSDGEQVITASW--DRVANLFDVETGT 304 (361)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~s~~~--d~~v~iwd~~~~~ 304 (361)
+... +..+.. +......+.|+|+|++|+.++. ++.|.++| .+++
T Consensus 106 t~~~--------------------------~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~ 158 (373)
T 2mad_H 106 TFLP--------------------------IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGS 158 (373)
T ss_pred CCcE--------------------------EEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCC
Confidence 5532 121111 1123457899999999999874 47899999 9999
Q ss_pred EEEE-eecCCCCCeE------EEEEcCCCcccCCCeEEEEcCCC
Q psy8430 305 ILQS-LTGHDEEPHI------LCVSSYYSKVSCDLFQRIQHLDC 341 (361)
Q Consensus 305 ~~~~-~~~h~~~v~~------~~~s~s~~~v~~dg~i~iW~~d~ 341 (361)
.+.+ +..... +.. .+++.+ .||.+.+| |.
T Consensus 159 ~~~~~i~~~~~-~~~~~~~~~~~~~~~-----~dg~~~~v--d~ 194 (373)
T 2mad_H 159 SDDQLLSSPTC-YHIHPGAPSTFYLLC-----AQGGLAKT--DH 194 (373)
T ss_pred EEeEEcCCCce-EEEEeCCCceEEEEc-----CCCCEEEE--EC
Confidence 8888 653221 110 223333 78998888 55
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.56 E-value=5e-05 Score=67.78 Aligned_cols=89 Identities=11% Similarity=-0.145 Sum_probs=67.2
Q ss_pred cceeeeEEeeccCCCeEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEEeCC-------CCCeEEEEE
Q psy8430 149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH-------SGSVNSVRF 211 (361)
Q Consensus 149 ~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s----------~d~~i~~wd~~~~~~~~~~~~h-------~~~v~~v~~ 211 (361)
.+++.+.++.....+ .++++|||+.++.+. .++.|.+||..+.+.+..+.-. ......++|
T Consensus 55 ~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~ 132 (373)
T 2mad_H 55 GSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNAN 132 (373)
T ss_pred CCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEE
Confidence 355666777655555 899999999888876 3678999999988877776522 134568999
Q ss_pred ecCCCEEEEEEC--CCcEEEEeccccccccC
Q psy8430 212 LPNKDLVLSASG--DKSVHIWQAVINWECLN 240 (361)
Q Consensus 212 ~~~~~~l~s~~~--d~~i~lwd~~~~~~~~~ 240 (361)
+|+|++|+.+.. ++.|.++| .+++.+..
T Consensus 133 spDG~~l~v~n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 133 TPNNADLLFFQFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred CCCCCEEEEEecCCCCeEEEEE-CCCCEEeE
Confidence 999999998874 47899999 87765443
No 210
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.46 E-value=8e-09 Score=92.48 Aligned_cols=156 Identities=10% Similarity=0.006 Sum_probs=79.2
Q ss_pred ceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCC-CeE-EEEEecCCCEEEEEECCCcE
Q psy8430 150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG-SVN-SVRFLPNKDLVLSASGDKSV 227 (361)
Q Consensus 150 ~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~-~v~-~v~~~~~~~~l~s~~~d~~i 227 (361)
+++.+-++.. +.+.+..+..++..+++++.|+.|..||..+|+.+..+..+.. .+. +..+. .+..+++++.|+.+
T Consensus 28 tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v 104 (369)
T 2hz6_A 28 TGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIW 104 (369)
T ss_dssp TCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEE
T ss_pred CCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEE
Confidence 3444444444 4455555666777888888999999999999887666653321 110 00111 34567788889999
Q ss_pred EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEE
Q psy8430 228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 307 (361)
Q Consensus 228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 307 (361)
..||..+++... .+..+. ...++|++..+++++.|+.|+.||.++|+.+.
T Consensus 105 ~a~D~~tG~~~w--------------------------~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 105 YVIDLLTGEKQQ--------------------------TLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRW 154 (369)
T ss_dssp EEECCC----------------------------------------------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred EEEECCCCcEEE--------------------------EecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEE
Confidence 999998874321 111111 12345688899999999999999999998765
Q ss_pred Eeec--CCCCCe-------EEEEEcCCCcccCCCeEEEEcCCCCCCC
Q psy8430 308 SLTG--HDEEPH-------ILCVSSYYSKVSCDLFQRIQHLDCGTSE 345 (361)
Q Consensus 308 ~~~~--h~~~v~-------~~~~s~s~~~v~~dg~i~iW~~d~~~~~ 345 (361)
.+.. ....+. ..++.++ .||.|..| |..+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~v~~~~-----~dg~v~a~--d~~tG~ 194 (369)
T 2hz6_A 155 NATYFDYAASLPEDDVDYKMSHFVSN-----GDGLVVTV--DSESGD 194 (369)
T ss_dssp EEEEEEECCBCCCCCTTCCCCEEEEE-----TSCEEEEE--CTTTCC
T ss_pred eEecccccCccccCCccccceEEEEC-----CCCEEEEE--ECCCCc
Confidence 5432 111111 2344455 78999999 775544
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.46 E-value=7.1e-05 Score=64.42 Aligned_cols=154 Identities=16% Similarity=0.151 Sum_probs=93.1
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC----CCCCeEEEEEecCCCEEEEEECC---------Cc
Q psy8430 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG----HSGSVNSVRFLPNKDLVLSASGD---------KS 226 (361)
Q Consensus 160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~----h~~~v~~v~~~~~~~~l~s~~~d---------~~ 226 (361)
....+.+++++++|+++++. ++.|.+||..+++....... ....+++++++|+|+++++...+ ..
T Consensus 52 ~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~ 129 (297)
T 3g4e_A 52 MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQ 129 (297)
T ss_dssp CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTC
T ss_pred CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCC
Confidence 45679999999999966554 56899999988865433322 12458899999999977654322 23
Q ss_pred EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEE-EeCCCcEEEeeC--CCC
Q psy8430 227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT-ASWDRVANLFDV--ETG 303 (361)
Q Consensus 227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~d~~v~iwd~--~~~ 303 (361)
-.||.+.... ....+..+......++|+|+++.++. .+.++.|.+||+ .+|
T Consensus 130 ~~l~~~d~~g--------------------------~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G 183 (297)
T 3g4e_A 130 GALYSLFPDH--------------------------HVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTG 183 (297)
T ss_dssp EEEEEECTTS--------------------------CEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTC
T ss_pred cEEEEEECCC--------------------------CEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCC
Confidence 4555543210 11122233345688999999997754 455788999987 455
Q ss_pred eE-----EEEeecCCCCCeEEEEEcC-CCccc--CCCeEEEEcCCCCC
Q psy8430 304 TI-----LQSLTGHDEEPHILCVSSY-YSKVS--CDLFQRIQHLDCGT 343 (361)
Q Consensus 304 ~~-----~~~~~~h~~~v~~~~~s~s-~~~v~--~dg~i~iW~~d~~~ 343 (361)
.. +..+..+......+.+... .+.|+ .++.|..| |..+
T Consensus 184 ~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~--d~~t 229 (297)
T 3g4e_A 184 QISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRL--DPVT 229 (297)
T ss_dssp CEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEE--CTTT
T ss_pred cccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEE--cCCC
Confidence 43 2222222233344444332 11221 46779999 7643
No 212
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.41 E-value=1.1e-05 Score=69.66 Aligned_cols=118 Identities=10% Similarity=0.110 Sum_probs=86.1
Q ss_pred ccCCCeEEEEEc----CCCCEE-EEEeCCCcEEEEeCC-CCe-----EEEEEeCCC-CCeEEEEEecCCCEEEEEECCCc
Q psy8430 159 GHRDGVWDVAVR----PGQPVL-GSASADRTVRLWSTQ-TGK-----CVLQYSGHS-GSVNSVRFLPNKDLVLSASGDKS 226 (361)
Q Consensus 159 ~h~~~V~~l~~~----~~~~~l-~s~s~d~~i~~wd~~-~~~-----~~~~~~~h~-~~v~~v~~~~~~~~l~s~~~d~~ 226 (361)
.+......++|+ |+++.| ++...++.|.+||.. ++. ....+.++. ..+..++++++|+++++...++.
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTE
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCE
Confidence 344557889999 999655 444567899999986 453 222333343 66889999999999888888999
Q ss_pred EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEE-EeCCCcEEEeeCCC
Q psy8430 227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT-ASWDRVANLFDVET 302 (361)
Q Consensus 227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~d~~v~iwd~~~ 302 (361)
|.+||..++. ....+..+...+.+++|+|+|++|+. ...++.|..|++..
T Consensus 249 i~~~d~~~g~--------------------------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 249 IEVFGPDGGQ--------------------------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEECTTCBS--------------------------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEEcCCCCc--------------------------EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 9999976441 23444556678999999999995554 45567899999874
No 213
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.40 E-value=1.1e-05 Score=71.55 Aligned_cols=87 Identities=9% Similarity=-0.130 Sum_probs=68.3
Q ss_pred cCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEEeCC-------CCCeEE
Q psy8430 146 TSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH-------SGSVNS 208 (361)
Q Consensus 146 ~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s----------~d~~i~~wd~~~~~~~~~~~~h-------~~~v~~ 208 (361)
.+..+.+.+.++.....+ .+.++|||..++.+. .+++|.+||..+++.+.++... ......
T Consensus 51 ID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ 128 (368)
T 1mda_H 51 SCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHI 128 (368)
T ss_dssp EETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTS
T ss_pred EECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcce
Confidence 345666777888766666 799999999888876 3689999999999999988643 134678
Q ss_pred EEEecCCCEEEEEEC--CCcEEE--Eeccc
Q psy8430 209 VRFLPNKDLVLSASG--DKSVHI--WQAVI 234 (361)
Q Consensus 209 v~~~~~~~~l~s~~~--d~~i~l--wd~~~ 234 (361)
++++|+|++++.+.. +..+.+ +|+.+
T Consensus 129 ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 129 IGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred EEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 999999999988875 356888 88865
No 214
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.36 E-value=4.2e-05 Score=66.89 Aligned_cols=139 Identities=9% Similarity=-0.019 Sum_probs=91.8
Q ss_pred CCeEEEEEcCCCCEEEEEeC------CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEE-ECCCcEEEEecc-
Q psy8430 162 DGVWDVAVRPGQPVLGSASA------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA-SGDKSVHIWQAV- 233 (361)
Q Consensus 162 ~~V~~l~~~~~~~~l~s~s~------d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-~~d~~i~lwd~~- 233 (361)
..+.+++++|+|+++++... .+.|..++ +++... +..+......++|+|+++.++.+ +.++.|.+|++.
T Consensus 134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~ 210 (326)
T 2ghs_A 134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDA 210 (326)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCT
T ss_pred CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEccc
Confidence 35889999999997766542 24455555 555433 32234567899999999876544 457889999975
Q ss_pred -ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecC
Q psy8430 234 -INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312 (361)
Q Consensus 234 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h 312 (361)
++.... .......+.........++++++|.+.++...++.|.+||. +++.+..+..+
T Consensus 211 ~~Gl~~~--------------------~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~ 269 (326)
T 2ghs_A 211 RTGLPTG--------------------KAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVP 269 (326)
T ss_dssp TTCCBSS--------------------CCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECS
T ss_pred ccCCccc--------------------CceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECC
Confidence 220000 00111122223455678999999988887777789999998 67888888776
Q ss_pred CCCCeEEEEEcC
Q psy8430 313 DEEPHILCVSSY 324 (361)
Q Consensus 313 ~~~v~~~~~s~s 324 (361)
...+.++.+++.
T Consensus 270 ~~~~~~~af~g~ 281 (326)
T 2ghs_A 270 GKQTTCPAFIGP 281 (326)
T ss_dssp CSBEEEEEEEST
T ss_pred CCCcEEEEEecC
Confidence 666777777643
No 215
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.34 E-value=0.00011 Score=64.32 Aligned_cols=150 Identities=15% Similarity=0.036 Sum_probs=89.9
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC----CCCCeEEEEEecCCCEEEEEECC----CcEEEEec
Q psy8430 161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG----HSGSVNSVRFLPNKDLVLSASGD----KSVHIWQA 232 (361)
Q Consensus 161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~----h~~~v~~v~~~~~~~~l~s~~~d----~~i~lwd~ 232 (361)
...+.+++|+++|+++++. .+ .|.+||..+++....... ....+.+++++|+|+++++...+ +...||.+
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~ 166 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHV 166 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEE
Confidence 4679999999999877764 44 599999988875433221 12468899999999977655422 23444443
Q ss_pred cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEeeCC--CC-e----
Q psy8430 233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVE--TG-T---- 304 (361)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~--~~-~---- 304 (361)
..+ ....+..+......++|+|+|+.++.+ +.++.|.+||+. +| .
T Consensus 167 ~~g---------------------------~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~ 219 (326)
T 2ghs_A 167 AKG---------------------------KVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKA 219 (326)
T ss_dssp ETT---------------------------EEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCC
T ss_pred eCC---------------------------cEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCc
Confidence 222 111222223456789999999877555 456889999986 66 3
Q ss_pred -EEEEeecCCCCCeEEEEEcCC-Cccc--CCCeEEEEcCCC
Q psy8430 305 -ILQSLTGHDEEPHILCVSSYY-SKVS--CDLFQRIQHLDC 341 (361)
Q Consensus 305 -~~~~~~~h~~~v~~~~~s~s~-~~v~--~dg~i~iW~~d~ 341 (361)
.+..+.........+.+...+ +.++ .++.|.+| |.
T Consensus 220 ~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~--d~ 258 (326)
T 2ghs_A 220 EVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRY--DT 258 (326)
T ss_dssp EEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEE--CT
T ss_pred eEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEE--CC
Confidence 222222222333334333321 1222 36788888 65
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.32 E-value=5.4e-05 Score=68.48 Aligned_cols=139 Identities=13% Similarity=0.076 Sum_probs=84.4
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEE----EeCCCCCe--EEEEEecC-CCEEEEEECCCcEEEEec
Q psy8430 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ----YSGHSGSV--NSVRFLPN-KDLVLSASGDKSVHIWQA 232 (361)
Q Consensus 160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~----~~~h~~~v--~~v~~~~~-~~~l~s~~~d~~i~lwd~ 232 (361)
+...+.+++++|++..|+.+..++.|..||..++..... ..++.... ..++|+|+ +.++++-..++.|..|+.
T Consensus 217 ~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~ 296 (409)
T 3hrp_A 217 FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITP 296 (409)
T ss_dssp SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence 456678999999544555577788999999987753322 22222222 39999995 666666667889999986
Q ss_pred cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCCCeEEEEeec
Q psy8430 233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTG 311 (361)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~ 311 (361)
........... ... ... .-......-.....++++|+|.++++-+ .++.|+.||+.++.. .++.+
T Consensus 297 ~g~~~~~~g~~-------~~~---g~~---dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g 362 (409)
T 3hrp_A 297 DGECEWFCGSA-------TQK---TVQ---DGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAG 362 (409)
T ss_dssp TCCEEEEEECT-------TCC---SCB---CEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEE
T ss_pred CCCEEEEEeCC-------CCC---CcC---CCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeC
Confidence 53211000000 000 000 0000001123578999999999777777 789999999887764 44544
Q ss_pred C
Q psy8430 312 H 312 (361)
Q Consensus 312 h 312 (361)
+
T Consensus 363 ~ 363 (409)
T 3hrp_A 363 Q 363 (409)
T ss_dssp C
T ss_pred C
Confidence 4
No 217
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.31 E-value=1.7e-05 Score=70.50 Aligned_cols=162 Identities=11% Similarity=-0.131 Sum_probs=103.3
Q ss_pred CccceeeeEEeeccCCCeEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEEeCC-------CCCeEEE
Q psy8430 147 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH-------SGSVNSV 209 (361)
Q Consensus 147 ~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s----------~d~~i~~wd~~~~~~~~~~~~h-------~~~v~~v 209 (361)
+..+.+.+.++.....+ .+.++|||++++.++ .++.|.+||..+++.+..+.-. ......+
T Consensus 65 D~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~ 142 (386)
T 3sjl_D 65 DGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMT 142 (386)
T ss_dssp ETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGE
T ss_pred ECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceE
Confidence 34456677777766666 499999999877765 3678999999999988887522 1256679
Q ss_pred EEecCCCEEEEEEC--CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEE
Q psy8430 210 RFLPNKDLVLSASG--DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVI 287 (361)
Q Consensus 210 ~~~~~~~~l~s~~~--d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 287 (361)
+|+|+|++++.+.. ++.|.++|+.+.+ .+..+.... + ...+....+.++
T Consensus 143 a~spDGk~lyVan~~~~~~VsVID~~t~~--------------------------vv~tI~v~g--~-~~~~P~g~~~~~ 193 (386)
T 3sjl_D 143 SLTPDGKTLLFYQFSPAPAVGVVDLEGKA--------------------------FKRMLDVPD--C-YHIFPTAPDTFF 193 (386)
T ss_dssp EECTTSSEEEEEECSSSCEEEEEETTTTE--------------------------EEEEEECCS--E-EEEEEEETTEEE
T ss_pred EEcCCCCEEEEEEcCCCCeEEEEECCCCc--------------------------EEEEEECCC--c-ceeecCCCceeE
Confidence 99999999888864 6899999998763 233332211 1 122333456677
Q ss_pred EEeCCCcEEEeeCCC-CeEEEEeecCC----CCCeE-EEE-EcC--CCcccCCCeEEEEcCCC
Q psy8430 288 TASWDRVANLFDVET-GTILQSLTGHD----EEPHI-LCV-SSY--YSKVSCDLFQRIQHLDC 341 (361)
Q Consensus 288 s~~~d~~v~iwd~~~-~~~~~~~~~h~----~~v~~-~~~-s~s--~~~v~~dg~i~iW~~d~ 341 (361)
+.+.||.+.+.++.+ ++...+...+- ..+.. ..+ +.. ..+++.+|.|.+. |.
T Consensus 194 ~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~--d~ 254 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQI--DL 254 (386)
T ss_dssp EEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEE--EC
T ss_pred EECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEE--EC
Confidence 888888888888875 55432221111 11110 111 111 2345578899999 65
No 218
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.30 E-value=0.00019 Score=61.28 Aligned_cols=153 Identities=10% Similarity=-0.001 Sum_probs=103.0
Q ss_pred ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE-EEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccccc
Q psy8430 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 237 (361)
Q Consensus 159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~ 237 (361)
.....+.+++++++|.++++...++.|.+||.. ++... .+......+.++++.+++.++++...++.|..||.. +..
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 345678999999999988887788999999987 65433 222344679999999999988877778889999875 311
Q ss_pred ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEE-eecCCCCC
Q psy8430 238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS-LTGHDEEP 316 (361)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~-~~~h~~~v 316 (361)
...........+..++++++|.++++...++.|..||.. ++.... +......+
T Consensus 95 -------------------------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~ 148 (300)
T 2qc5_A 95 -------------------------TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYP 148 (300)
T ss_dssp -------------------------EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCE
T ss_pred -------------------------EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCc
Confidence 011112234578899999999988887778899999987 655422 22223334
Q ss_pred eEEEEEcC-CCccc--CCCeEEEEcCCC
Q psy8430 317 HILCVSSY-YSKVS--CDLFQRIQHLDC 341 (361)
Q Consensus 317 ~~~~~s~s-~~~v~--~dg~i~iW~~d~ 341 (361)
..+.+... .++++ .++.|..| |.
T Consensus 149 ~~i~~d~~g~l~v~~~~~~~i~~~--~~ 174 (300)
T 2qc5_A 149 AFITLGSDNALWFTENQNNSIGRI--TN 174 (300)
T ss_dssp EEEEECTTSSEEEEETTTTEEEEE--CT
T ss_pred eeEEECCCCCEEEEecCCCeEEEE--CC
Confidence 44444332 11221 46677778 55
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.28 E-value=4.7e-05 Score=65.83 Aligned_cols=121 Identities=12% Similarity=0.087 Sum_probs=82.3
Q ss_pred EEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe---C-CCCCeEEEEEecCCCEEEE----EEC---
Q psy8430 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS---G-HSGSVNSVRFLPNKDLVLS----ASG--- 223 (361)
Q Consensus 155 ~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~---~-h~~~v~~v~~~~~~~~l~s----~~~--- 223 (361)
..+..+...+..++++++|+++++...++.|.+|+.. ++...... + ....+.+++++|+|+++++ |..
T Consensus 79 ~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~ 157 (305)
T 3dr2_A 79 DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPS 157 (305)
T ss_dssp EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGG
T ss_pred EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccc
Confidence 4455667789999999999977776667899999986 55322211 1 1235678999999998886 322
Q ss_pred ----------CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC-
Q psy8430 224 ----------DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD- 292 (361)
Q Consensus 224 ----------d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d- 292 (361)
.+.|..||..++ .+..+. .......++|+|+++.|+.+...
T Consensus 158 ~~~~~~~~~~~~~v~~~d~~~g---------------------------~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~ 209 (305)
T 3dr2_A 158 QGCPADPELAHHSVYRLPPDGS---------------------------PLQRMA-DLDHPNGLAFSPDEQTLYVSQTPE 209 (305)
T ss_dssp GSCCCCCSSSCEEEEEECSSSC---------------------------CCEEEE-EESSEEEEEECTTSSEEEEEECCC
T ss_pred cccccccccCCCeEEEEcCCCC---------------------------cEEEEe-cCCCCcceEEcCCCCEEEEEecCC
Confidence 245666665433 111222 33456789999999988887765
Q ss_pred -----CcEEEeeCCCCe
Q psy8430 293 -----RVANLFDVETGT 304 (361)
Q Consensus 293 -----~~v~iwd~~~~~ 304 (361)
+.|.+||+..+.
T Consensus 210 ~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 210 QGHGSVEITAFAWRDGA 226 (305)
T ss_dssp ---CCCEEEEEEEETTE
T ss_pred cCCCCCEEEEEEecCCC
Confidence 689999987543
No 220
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.28 E-value=0.0004 Score=59.18 Aligned_cols=152 Identities=9% Similarity=-0.066 Sum_probs=101.6
Q ss_pred ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEE-EEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEecccccc
Q psy8430 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL-QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 237 (361)
Q Consensus 159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~-~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~ 237 (361)
.+...+.+++++++|.++++...++.|..||.. ++... ........+.++++.+++.++++...++.|..||.. +..
T Consensus 59 ~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 59 TPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI 136 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE
Confidence 344679999999999988887778899999987 65432 222245678999999999988887778899999875 311
Q ss_pred ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee--cCCCC
Q psy8430 238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT--GHDEE 315 (361)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~--~h~~~ 315 (361)
....+......+..++++++|+..++...++.|..||. +++... +. .+...
T Consensus 137 -------------------------~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~ 189 (300)
T 2qc5_A 137 -------------------------YEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAA 189 (300)
T ss_dssp -------------------------EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCC
T ss_pred -------------------------EEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCC
Confidence 00111223457889999999997777766788999998 565543 32 22233
Q ss_pred CeEEEEEcC-CCccc--CCCeEEEEcCCC
Q psy8430 316 PHILCVSSY-YSKVS--CDLFQRIQHLDC 341 (361)
Q Consensus 316 v~~~~~s~s-~~~v~--~dg~i~iW~~d~ 341 (361)
+..+.+... .++++ ..+.|.+| |.
T Consensus 190 ~~~i~~d~~g~l~v~~~~~~~i~~~--~~ 216 (300)
T 2qc5_A 190 PVGITSGNDGALWFVEIMGNKIGRI--TT 216 (300)
T ss_dssp EEEEEECTTSSEEEEETTTTEEEEE--CT
T ss_pred cceEEECCCCCEEEEccCCCEEEEE--cC
Confidence 444444432 12222 45678888 55
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.25 E-value=2.3e-05 Score=67.80 Aligned_cols=159 Identities=15% Similarity=0.033 Sum_probs=101.7
Q ss_pred eeEEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEe
Q psy8430 153 KIRSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231 (361)
Q Consensus 153 ~~~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd 231 (361)
.+..+..+........|+|+|+ +++++..++.|..|+. ++. ...+..+...+..++++++|+++++...++.|.+|+
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEEC
Confidence 4455556677788999999998 6777778899999998 454 345555677899999999999777666668899998
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC-CCCcEEEEEEcCCCCEEEE----EeC-------------CC
Q psy8430 232 AVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLSDGEQVIT----ASW-------------DR 293 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s----~~~-------------d~ 293 (361)
.. +... .......+ ....+..++++|+|.++++ |.. .+
T Consensus 114 ~~-g~~~-----------------------~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~ 169 (305)
T 3dr2_A 114 AD-GQAH-----------------------LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHH 169 (305)
T ss_dssp TT-SCEE-----------------------EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCE
T ss_pred CC-CCEE-----------------------EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCC
Confidence 64 2100 00001111 1134667899999998886 332 25
Q ss_pred cEEEeeCCCCeEEEEeecCCCCCeEEEEEcCC--Cccc-C------CCeEEEEcCCC
Q psy8430 294 VANLFDVETGTILQSLTGHDEEPHILCVSSYY--SKVS-C------DLFQRIQHLDC 341 (361)
Q Consensus 294 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~--~~v~-~------dg~i~iW~~d~ 341 (361)
.|+.||..+++..... .-.....+.++... ++++ . ++.|.+| |+
T Consensus 170 ~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~--~~ 222 (305)
T 3dr2_A 170 SVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAF--AW 222 (305)
T ss_dssp EEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEE--EE
T ss_pred eEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEE--Ee
Confidence 6788888777654332 22233345555542 2232 2 2678888 55
No 222
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.19 E-value=3.7e-05 Score=67.72 Aligned_cols=124 Identities=11% Similarity=0.037 Sum_probs=84.8
Q ss_pred CCeEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCeEEEEEe-------CCCCCeEEEEEecCCCEEEEEEC-----CCcE
Q psy8430 162 DGVWDVAVRPGQPVLGSAS--ADRTVRLWSTQTGKCVLQYS-------GHSGSVNSVRFLPNKDLVLSASG-----DKSV 227 (361)
Q Consensus 162 ~~V~~l~~~~~~~~l~s~s--~d~~i~~wd~~~~~~~~~~~-------~h~~~v~~v~~~~~~~~l~s~~~-----d~~i 227 (361)
..+..++++|+|+++++.. .++.++||.+.+++. ..+. .+-..+..++++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 6799999999999988864 234355666555543 3332 24578999999999887665543 5789
Q ss_pred EEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe------CCCCcEEEEEEcCCCCEEEEE-e---CCCcEEE
Q psy8430 228 HIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL------GHSNVVIAADWLSDGEQVITA-S---WDRVANL 297 (361)
Q Consensus 228 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~s~-~---~d~~v~i 297 (361)
.+||+.++.. ...+. .+...+..+++++++..++.+ . .++.|.+
T Consensus 96 ~~~d~~tg~~--------------------------~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v 149 (343)
T 2qe8_A 96 VAWDTLNNQL--------------------------SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIR 149 (343)
T ss_dssp EEEETTTTEE--------------------------EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEE
T ss_pred EEEECCCCeE--------------------------EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEE
Confidence 9999876632 11121 123456789999865555444 4 5788999
Q ss_pred eeCCCCeEEEEeecC
Q psy8430 298 FDVETGTILQSLTGH 312 (361)
Q Consensus 298 wd~~~~~~~~~~~~h 312 (361)
||+.+++....+.+|
T Consensus 150 ~d~~~g~~~r~~~~~ 164 (343)
T 2qe8_A 150 VDLQTGLAARVLQGY 164 (343)
T ss_dssp EETTTCCEEEECTTC
T ss_pred EECCCCCEEEEecCC
Confidence 999988877766543
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.18 E-value=3.3e-05 Score=68.10 Aligned_cols=138 Identities=9% Similarity=-0.047 Sum_probs=83.3
Q ss_pred ccCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEeCCCCeEEEEEeCC------CCCeEEEEEecCCCE-EEEEE---C
Q psy8430 159 GHRDGVWDVAVRPGQPVLGSASA-----DRTVRLWSTQTGKCVLQYSGH------SGSVNSVRFLPNKDL-VLSAS---G 223 (361)
Q Consensus 159 ~h~~~V~~l~~~~~~~~l~s~s~-----d~~i~~wd~~~~~~~~~~~~h------~~~v~~v~~~~~~~~-l~s~~---~ 223 (361)
+|...+..++++++|+++++-.. ++.|.+||+.+++.+..+... ...+..++++|++.. +++.. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 56788999999999876665543 578999999999877776532 245789999986444 45555 5
Q ss_pred CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEE------EeCCCCcEEEEEEcCCCCEEEEEeCCC-cEE
Q psy8430 224 DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKE------LLGHSNVVIAADWLSDGEQVITASWDR-VAN 296 (361)
Q Consensus 224 d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~s~~~d~-~v~ 296 (361)
++.|.+||+.++............... . .........+.. +......+..++|+|+|++|+.+..++ .+.
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~--~-~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~ 220 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPE--D-IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMY 220 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCC--S-CCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCccccc--c-cceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEE
Confidence 789999998766432211110000000 0 000000000000 000113468899999999999887766 444
Q ss_pred Eee
Q psy8430 297 LFD 299 (361)
Q Consensus 297 iwd 299 (361)
.++
T Consensus 221 ~~~ 223 (343)
T 2qe8_A 221 RIK 223 (343)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 224
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.18 E-value=0.00013 Score=70.67 Aligned_cols=172 Identities=9% Similarity=-0.041 Sum_probs=103.2
Q ss_pred EEEEcCCCCEEEEEeCCCc-------------------EEEEeCCCCeEEEEEeC--CC-------CCeEEEEEecCCC-
Q psy8430 166 DVAVRPGQPVLGSASADRT-------------------VRLWSTQTGKCVLQYSG--HS-------GSVNSVRFLPNKD- 216 (361)
Q Consensus 166 ~l~~~~~~~~l~s~s~d~~-------------------i~~wd~~~~~~~~~~~~--h~-------~~v~~v~~~~~~~- 216 (361)
.++++|+..+++.++.++. |..||..+|+.+..++. |. ..+.......+|+
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 5789998888988887764 99999999998887764 21 1222222223554
Q ss_pred --EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCC----CCCCce---------ecccccEEEeCC--CCcEEEEEE
Q psy8430 217 --LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKE----PDESSI---------TLRTPVKELLGH--SNVVIAADW 279 (361)
Q Consensus 217 --~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~----~~~~~~---------~~~~~~~~~~~~--~~~v~~~~~ 279 (361)
.++.++.+|.+.++|..+++.+........ .+.. ...... ..........+. ......++|
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~--~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~ 396 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELLSAKGIVPQ--SWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSY 396 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCC--SSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEE
T ss_pred EEEEEEECCCCeEEEEECCCCCEecccccccc--ccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceE
Confidence 688899999999999998876522110000 0000 000000 000000000000 001223678
Q ss_pred cCCCCEEEEEeC---------------------------------------------CCcEEEeeCCCCeEEEEeecCCC
Q psy8430 280 LSDGEQVITASW---------------------------------------------DRVANLFDVETGTILQSLTGHDE 314 (361)
Q Consensus 280 ~~~~~~l~s~~~---------------------------------------------d~~v~iwd~~~~~~~~~~~~h~~ 314 (361)
+|+...+++... +|.|+.||+.+|+.+-.+..+..
T Consensus 397 dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~ 476 (689)
T 1yiq_A 397 NPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI 476 (689)
T ss_dssp ETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS
T ss_pred CCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC
Confidence 888777776532 37799999999999887765543
Q ss_pred CCeE-------EEEEcCCCcccCCCeEEEEcCCCCCCCC
Q psy8430 315 EPHI-------LCVSSYYSKVSCDLFQRIQHLDCGTSEN 346 (361)
Q Consensus 315 ~v~~-------~~~s~s~~~v~~dg~i~iW~~d~~~~~~ 346 (361)
.... +++.++ .||.|+.| |..|++.
T Consensus 477 ~~~g~~~tagglvf~gt-----~dg~l~a~--D~~tG~~ 508 (689)
T 1yiq_A 477 FNGGTLSTAGNLVFEGS-----ADGRVIAY--AADTGEK 508 (689)
T ss_dssp CCCCEEEETTTEEEEEC-----TTSEEEEE--ETTTCCE
T ss_pred ccCccceECCCEEEEEC-----CCCcEEEE--ECCCCcc
Confidence 2222 666667 99999999 8855443
No 225
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.17 E-value=3.7e-05 Score=69.47 Aligned_cols=113 Identities=12% Similarity=0.066 Sum_probs=83.9
Q ss_pred CCCCEEEEEeC-C----CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE----------CCCcEEEEecccc
Q psy8430 171 PGQPVLGSASA-D----RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------GDKSVHIWQAVIN 235 (361)
Q Consensus 171 ~~~~~l~s~s~-d----~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~d~~i~lwd~~~~ 235 (361)
+++..++.+.. + ++|.++|..+++.+..+..-..+ .++++|+++.++.+. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 35554444443 2 69999999999999998844444 899999999887775 4678999998776
Q ss_pred ccccCCCCCCCCCCCCCCCCCceecccccEEEeCC-------CCcEEEEEEcCCCCEEEEEeC--CCcEEEeeCCCCeEE
Q psy8430 236 WECLNNDNDSDLDESKEPDESSITLRTPVKELLGH-------SNVVIAADWLSDGEQVITASW--DRVANLFDVETGTIL 306 (361)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~s~~~--d~~v~iwd~~~~~~~ 306 (361)
.. +..+... ......+.|+|+|++++.+.. ++.|.+.|+.+++.+
T Consensus 160 ~v--------------------------v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 160 LP--------------------------IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFD 213 (426)
T ss_dssp CE--------------------------EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred cE--------------------------EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEE
Confidence 32 2222211 123446789999999999875 578999999999999
Q ss_pred EEeec
Q psy8430 307 QSLTG 311 (361)
Q Consensus 307 ~~~~~ 311 (361)
.++..
T Consensus 214 ~~I~v 218 (426)
T 3c75_H 214 RMLDV 218 (426)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 88874
No 226
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.16 E-value=0.00031 Score=59.07 Aligned_cols=163 Identities=11% Similarity=-0.042 Sum_probs=101.7
Q ss_pred eeeeEEeeccCC--CeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCCeEEEEEeC-CCCCeEEEEEecCCCEE-EEEECC
Q psy8430 151 CYKIRSFSGHRD--GVWDVAVRPGQPVLGSASA--DRTVRLWSTQTGKCVLQYSG-HSGSVNSVRFLPNKDLV-LSASGD 224 (361)
Q Consensus 151 ~~~~~~l~~h~~--~V~~l~~~~~~~~l~s~s~--d~~i~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l-~s~~~d 224 (361)
.+.+.++. |.. ....+.|++++.++++.+. ++.|.++|+.+++.+..+.- .......+++. +..+ ++.-.+
T Consensus 9 ~~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~ 85 (266)
T 2iwa_A 9 VEVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLK 85 (266)
T ss_dssp EEEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTC
T ss_pred ceEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecC
Confidence 45556664 432 3578999998766665554 57999999999998888762 22233345554 4444 455568
Q ss_pred CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCe
Q psy8430 225 KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT 304 (361)
Q Consensus 225 ~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 304 (361)
+.+.++|..+.. .+..+......-+. ++++|+.++.+..++.|.++|..+.+
T Consensus 86 ~~v~viD~~t~~--------------------------v~~~i~~g~~~g~g--lt~Dg~~l~vs~gs~~l~viD~~t~~ 137 (266)
T 2iwa_A 86 NIGFIYDRRTLS--------------------------NIKNFTHQMKDGWG--LATDGKILYGSDGTSILYEIDPHTFK 137 (266)
T ss_dssp SEEEEEETTTTE--------------------------EEEEEECCSSSCCE--EEECSSSEEEECSSSEEEEECTTTCC
T ss_pred CEEEEEECCCCc--------------------------EEEEEECCCCCeEE--EEECCCEEEEECCCCeEEEEECCCCc
Confidence 899999987653 23333221112233 44588888888788999999999999
Q ss_pred EEEEeecCCC--C---CeEEEEEcCCCcc--cCCCeEEEEcCCCCCCCC
Q psy8430 305 ILQSLTGHDE--E---PHILCVSSYYSKV--SCDLFQRIQHLDCGTSEN 346 (361)
Q Consensus 305 ~~~~~~~h~~--~---v~~~~~s~s~~~v--~~dg~i~iW~~d~~~~~~ 346 (361)
.+.++..... + +..+.+..+.+++ ..++.|.+- |..|++.
T Consensus 138 v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vI--D~~tg~V 184 (266)
T 2iwa_A 138 LIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARI--SAKDGTL 184 (266)
T ss_dssp EEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEE--ETTTCCE
T ss_pred EEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEE--ECCCCcE
Confidence 8888764321 1 2233333332222 256788888 8755443
No 227
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.15 E-value=0.00014 Score=70.63 Aligned_cols=148 Identities=12% Similarity=0.061 Sum_probs=91.6
Q ss_pred EEEEEcCCCCEEEEEeCCCc-------------EEEEeCCCCeE--EEEEe--C-CCCCeEEEEEecCCCEEEEE-ECC-
Q psy8430 165 WDVAVRPGQPVLGSASADRT-------------VRLWSTQTGKC--VLQYS--G-HSGSVNSVRFLPNKDLVLSA-SGD- 224 (361)
Q Consensus 165 ~~l~~~~~~~~l~s~s~d~~-------------i~~wd~~~~~~--~~~~~--~-h~~~v~~v~~~~~~~~l~s~-~~d- 224 (361)
..++|+ ||+.|+.++.+.. |++|++.++.. ...+. . |...+..+.|+|+|++++.. +.+
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 567899 9999999888743 99999977632 33333 3 44567899999999987543 322
Q ss_pred --CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC-C---CcEEEe
Q psy8430 225 --KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-D---RVANLF 298 (361)
Q Consensus 225 --~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d---~~v~iw 298 (361)
..|.+||+.++. .....+..+....... |+++|..|+..+. + +.|..+
T Consensus 257 ~~~~i~~~d~~~~~-------------------------~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~ 310 (693)
T 3iuj_A 257 SGNRLYVKDLSQEN-------------------------APLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTV 310 (693)
T ss_dssp SCCEEEEEETTSTT-------------------------CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEE
T ss_pred CCcEEEEEECCCCC-------------------------CceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEE
Confidence 478899886541 1344555566655554 6666776655443 3 579999
Q ss_pred eCCCCeE--EEEeecCCCCCeEEEEEcCCCcc--cCCC--eEEEEcCCC
Q psy8430 299 DVETGTI--LQSLTGHDEEPHILCVSSYYSKV--SCDL--FQRIQHLDC 341 (361)
Q Consensus 299 d~~~~~~--~~~~~~h~~~v~~~~~s~s~~~v--~~dg--~i~iW~~d~ 341 (361)
|+.++.. ...+..|...+..+-..+..+.+ ..|| .|++| |.
T Consensus 311 d~~~~~~~~~~~l~~~~~~~~~~s~~g~~lv~~~~~~g~~~l~~~--d~ 357 (693)
T 3iuj_A 311 DAANPGPAHWRDLIPERQQVLTVHSGSGYLFAEYMVDATARVEQF--DY 357 (693)
T ss_dssp ETTSCCGGGCEEEECCCSSCEEEEEETTEEEEEEEETTEEEEEEE--CT
T ss_pred eCCCCCccccEEEecCCCCEEEEEEECCEEEEEEEECCeeEEEEE--EC
Confidence 9987654 34555555444332222221111 1454 67788 55
No 228
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.12 E-value=0.00014 Score=65.63 Aligned_cols=89 Identities=9% Similarity=-0.139 Sum_probs=68.7
Q ss_pred ccceeeeEEeeccCCCeEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEEeCC-------CCCeEEEE
Q psy8430 148 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS----------ADRTVRLWSTQTGKCVLQYSGH-------SGSVNSVR 210 (361)
Q Consensus 148 ~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s----------~d~~i~~wd~~~~~~~~~~~~h-------~~~v~~v~ 210 (361)
..+.+.+.++.-...+ .+.++|||+.++.+. .++.|.++|..+++.+..+.-- ......++
T Consensus 106 ~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~ 183 (426)
T 3c75_H 106 GSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNA 183 (426)
T ss_dssp TTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSE
T ss_pred CCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEE
Confidence 4556667777755566 899999999877775 3678999999999888877521 23456789
Q ss_pred EecCCCEEEEEEC--CCcEEEEeccccccc
Q psy8430 211 FLPNKDLVLSASG--DKSVHIWQAVINWEC 238 (361)
Q Consensus 211 ~~~~~~~l~s~~~--d~~i~lwd~~~~~~~ 238 (361)
|+|+|++++.+.. ++.|.+.|+.+.+.+
T Consensus 184 ~spDGk~lyV~n~~~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 184 LTPDNKNLLFYQFSPAPAVGVVDLEGKTFD 213 (426)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred EcCCCCEEEEEecCCCCeEEEEECCCCeEE
Confidence 9999999988874 578999999887554
No 229
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.07 E-value=0.0004 Score=57.88 Aligned_cols=163 Identities=14% Similarity=-0.007 Sum_probs=101.2
Q ss_pred eeeeEEeeccC-CCeEEEEEcCCCCEEEEEeCCC--cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEE-ECCCc
Q psy8430 151 CYKIRSFSGHR-DGVWDVAVRPGQPVLGSASADR--TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA-SGDKS 226 (361)
Q Consensus 151 ~~~~~~l~~h~-~~V~~l~~~~~~~~l~s~s~d~--~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-~~d~~ 226 (361)
.+.++++..-. .....|.|+ ++.++.+++.+| .|+.+|+.+++.+..+.-. .........++++.+..+ -.++.
T Consensus 31 ~~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSE
T ss_pred eEEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCE
Confidence 35556663222 334678898 677888888876 8999999999988887643 333332233345555444 46889
Q ss_pred EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430 227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL 306 (361)
Q Consensus 227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 306 (361)
+.++|..+.. .+.++.... .-..++ ++++.|+.+..++.|.++|..+.+.+
T Consensus 109 v~v~D~~t~~--------------------------~~~ti~~~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~ 159 (262)
T 3nol_A 109 GFVWNIRNLR--------------------------QVRSFNYDG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPV 159 (262)
T ss_dssp EEEEETTTCC--------------------------EEEEEECSS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCSEE
T ss_pred EEEEECccCc--------------------------EEEEEECCC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCeEE
Confidence 9999987663 334443222 223344 47888888777888999999999988
Q ss_pred EEeecCC--CCC---eEEEEEcCCCc--ccCCCeEEEEcCCCCCCCC
Q psy8430 307 QSLTGHD--EEP---HILCVSSYYSK--VSCDLFQRIQHLDCGTSEN 346 (361)
Q Consensus 307 ~~~~~h~--~~v---~~~~~s~s~~~--v~~dg~i~iW~~d~~~~~~ 346 (361)
.++.... .++ ..+-+..+.++ +-.+..|.+. |..|++.
T Consensus 160 ~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vI--Dp~tG~V 204 (262)
T 3nol_A 160 RTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRI--DPETGKV 204 (262)
T ss_dssp EEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEE--CTTTCBE
T ss_pred EEEEeccCCccccccceeEEECCEEEEEEccCCeEEEE--ECCCCcE
Confidence 8876532 122 22223332222 1256777777 8755543
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.01 E-value=0.0003 Score=67.88 Aligned_cols=173 Identities=9% Similarity=-0.047 Sum_probs=102.7
Q ss_pred EEEEEcCCCCEEEEEeCCC-------------------cEEEEeCCCCeEEEEEeC--CC-------CCeEEEEEecCC-
Q psy8430 165 WDVAVRPGQPVLGSASADR-------------------TVRLWSTQTGKCVLQYSG--HS-------GSVNSVRFLPNK- 215 (361)
Q Consensus 165 ~~l~~~~~~~~l~s~s~d~-------------------~i~~wd~~~~~~~~~~~~--h~-------~~v~~v~~~~~~- 215 (361)
..++++|++..++.++.++ +|..+|..+|+.+..++. |. .....+....+|
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 3578899888888887664 599999999998887763 21 122333344467
Q ss_pred --CEEEEEECCCcEEEEeccccccccCCCCCCCC-CCCCCCCCCcee------cccccEEEe---CCCCcEEEEEEcCCC
Q psy8430 216 --DLVLSASGDKSVHIWQAVINWECLNNDNDSDL-DESKEPDESSIT------LRTPVKELL---GHSNVVIAADWLSDG 283 (361)
Q Consensus 216 --~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~---~~~~~v~~~~~~~~~ 283 (361)
..++.++.+|.+.++|..+++.+......... ............ .......+. +.. .-..++|+|+.
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~-~w~~~a~dp~~ 404 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAH-NWHPMSFNPQT 404 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSS-CSSCCEEETTT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCccccc-CCCCceEcCCC
Confidence 67889999999999999988664321110000 000000000000 000000000 111 11257788888
Q ss_pred CEEEEEeC-------------------------------------------CCcEEEeeCCCCeEEEEeecCCCCCeE--
Q psy8430 284 EQVITASW-------------------------------------------DRVANLFDVETGTILQSLTGHDEEPHI-- 318 (361)
Q Consensus 284 ~~l~s~~~-------------------------------------------d~~v~iwd~~~~~~~~~~~~h~~~v~~-- 318 (361)
.++++... .+.|..||+.+|+.+-.+.........
T Consensus 405 ~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~ 484 (677)
T 1kb0_A 405 GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTL 484 (677)
T ss_dssp TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEE
T ss_pred CEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcce
Confidence 88877543 277999999999988777643211111
Q ss_pred -----EEEEcCCCcccCCCeEEEEcCCCCCCC
Q psy8430 319 -----LCVSSYYSKVSCDLFQRIQHLDCGTSE 345 (361)
Q Consensus 319 -----~~~s~s~~~v~~dg~i~iW~~d~~~~~ 345 (361)
+++.++ .||.+++| |..|++
T Consensus 485 ~~~g~~v~~g~-----~dg~l~a~--D~~tG~ 509 (677)
T 1kb0_A 485 TTAGNVVFQGT-----ADGRLVAY--HAATGE 509 (677)
T ss_dssp EETTTEEEEEC-----TTSEEEEE--ETTTCC
T ss_pred EeCCCEEEEEC-----CCCcEEEE--ECCCCc
Confidence 555566 99999999 875443
No 231
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.96 E-value=0.00018 Score=69.51 Aligned_cols=119 Identities=14% Similarity=0.157 Sum_probs=81.4
Q ss_pred EEcCCC---CEEEEEeCCCcEEEEeCCCCeEEEEEeCCC-----------CCe------------------------EEE
Q psy8430 168 AVRPGQ---PVLGSASADRTVRLWSTQTGKCVLQYSGHS-----------GSV------------------------NSV 209 (361)
Q Consensus 168 ~~~~~~---~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~-----------~~v------------------------~~v 209 (361)
....+| ..++.++.+|.+.++|..+|+.+..+.... .++ ..+
T Consensus 319 ~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~ 398 (677)
T 1kb0_A 319 DIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPM 398 (677)
T ss_dssp EEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCC
T ss_pred ecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCc
Confidence 344467 689999999999999999999887665211 011 146
Q ss_pred EEecCCCEEEEEECC-------------------------------------------CcEEEEeccccccccCCCCCCC
Q psy8430 210 RFLPNKDLVLSASGD-------------------------------------------KSVHIWQAVINWECLNNDNDSD 246 (361)
Q Consensus 210 ~~~~~~~~l~s~~~d-------------------------------------------~~i~lwd~~~~~~~~~~~~~~~ 246 (361)
+|+|++.++++...+ |.|..||+.+++.
T Consensus 399 a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~--------- 469 (677)
T 1kb0_A 399 SFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKA--------- 469 (677)
T ss_dssp EEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEE---------
T ss_pred eEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcE---------
Confidence 888988888776543 4555566555421
Q ss_pred CCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC
Q psy8430 247 LDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313 (361)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~ 313 (361)
.-... +..++.+..+...+..++.++.||.+++||.++|+.+.++....
T Consensus 470 -----------------~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 470 -----------------AWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp -----------------EEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred -----------------EeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence 11111 22233444456678899999999999999999999999887544
No 232
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.94 E-value=0.0023 Score=52.78 Aligned_cols=161 Identities=11% Similarity=-0.049 Sum_probs=99.6
Q ss_pred eeeEEeeccC--CCeEEEEEcCCCCEEEEEeCCC--cEEEEeCCCCeEEEEEeCCCCC-eEEEEEecCCCEEEEEECCCc
Q psy8430 152 YKIRSFSGHR--DGVWDVAVRPGQPVLGSASADR--TVRLWSTQTGKCVLQYSGHSGS-VNSVRFLPNKDLVLSASGDKS 226 (361)
Q Consensus 152 ~~~~~l~~h~--~~V~~l~~~~~~~~l~s~s~d~--~i~~wd~~~~~~~~~~~~h~~~-v~~v~~~~~~~~l~s~~~d~~ 226 (361)
+.++++ -|. .....+.|++ +.++.+.+.+| .|+.+|+.+++.+..+.-.... -..+++. .+++....-.++.
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSE
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCE
Confidence 455555 343 4466899987 66777777754 8999999999988887633221 1233443 2344445557899
Q ss_pred EEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430 227 VHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL 306 (361)
Q Consensus 227 i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 306 (361)
+.++|..+.. .+.++.... .-+.+++ ++..|+.+..++.|.++|..+.+.+
T Consensus 87 v~v~D~~tl~--------------------------~~~ti~~~~-~Gwglt~--dg~~L~vSdgs~~l~~iDp~t~~~~ 137 (243)
T 3mbr_X 87 GFVYDLATLT--------------------------PRARFRYPG-EGWALTS--DDSHLYMSDGTAVIRKLDPDTLQQV 137 (243)
T ss_dssp EEEEETTTTE--------------------------EEEEEECSS-CCCEEEE--CSSCEEEECSSSEEEEECTTTCCEE
T ss_pred EEEEECCcCc--------------------------EEEEEeCCC-CceEEee--CCCEEEEECCCCeEEEEeCCCCeEE
Confidence 9999987663 333443222 2244544 7777888788899999999999998
Q ss_pred EEeecCCC--C---CeEEEEEcCCCc--ccCCCeEEEEcCCCCCCCC
Q psy8430 307 QSLTGHDE--E---PHILCVSSYYSK--VSCDLFQRIQHLDCGTSEN 346 (361)
Q Consensus 307 ~~~~~h~~--~---v~~~~~s~s~~~--v~~dg~i~iW~~d~~~~~~ 346 (361)
.++..... + +..+-+..+.++ +-.+..|.+- |..|++.
T Consensus 138 ~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vI--Dp~tG~V 182 (243)
T 3mbr_X 138 GSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARI--DPASGKV 182 (243)
T ss_dssp EEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEE--CTTTCBE
T ss_pred EEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEE--ECCCCCE
Confidence 88865321 2 222222222111 2246677777 7755443
No 233
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.90 E-value=0.00086 Score=55.92 Aligned_cols=162 Identities=7% Similarity=-0.065 Sum_probs=99.9
Q ss_pred eeeEEeec-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430 152 YKIRSFSG-HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230 (361)
Q Consensus 152 ~~~~~l~~-h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw 230 (361)
+.++++.- -......|.|+. +.++.+.+.+|.|+++|+.+++.+..+-...-.-..+++. .+++.+..-.++.+.+|
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~-g~~Ly~ltw~~~~v~V~ 121 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASD-GERLYQLTWTEGLLFTW 121 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEEC-SSCEEEEESSSCEEEEE
T ss_pred EEEEEEcCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEe-CCEEEEEEccCCEEEEE
Confidence 44555532 223356788884 6788888899999999999998777662111112334443 23444455578899999
Q ss_pred eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430 231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 310 (361)
Q Consensus 231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 310 (361)
|..+.+ .+.++... ..-+.+++ +++.|+.+..++.|.++|..+.+.+.++.
T Consensus 122 D~~Tl~--------------------------~~~ti~~~-~eGwGLt~--Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~ 172 (268)
T 3nok_A 122 SGMPPQ--------------------------RERTTRYS-GEGWGLCY--WNGKLVRSDGGTMLTFHEPDGFALVGAVQ 172 (268)
T ss_dssp ETTTTE--------------------------EEEEEECS-SCCCCEEE--ETTEEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred ECCcCc--------------------------EEEEEeCC-CceeEEec--CCCEEEEECCCCEEEEEcCCCCeEEEEEE
Confidence 987663 33344322 22244444 78888888889999999999999988886
Q ss_pred cCC--CCC---eEEEEEcCCCc--ccCCCeEEEEcCCCCCCCC
Q psy8430 311 GHD--EEP---HILCVSSYYSK--VSCDLFQRIQHLDCGTSEN 346 (361)
Q Consensus 311 ~h~--~~v---~~~~~s~s~~~--v~~dg~i~iW~~d~~~~~~ 346 (361)
... ..+ ..+-+..+.++ +-.+..|.+- |..|++.
T Consensus 173 V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vI--Dp~TG~V 213 (268)
T 3nok_A 173 VKLRGQPVELINELECANGVIYANIWHSSDVLEI--DPATGTV 213 (268)
T ss_dssp CEETTEECCCEEEEEEETTEEEEEETTCSEEEEE--CTTTCBE
T ss_pred eCCCCcccccccccEEeCCEEEEEECCCCeEEEE--eCCCCcE
Confidence 532 122 22222222121 1256677777 8755443
No 234
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.89 E-value=0.00058 Score=66.82 Aligned_cols=114 Identities=13% Similarity=0.102 Sum_probs=73.8
Q ss_pred CeEEEEEc-CCCCEEEEEeC-CC----cEEEEeCCCC-eEEE-EEeCCCCCeEEEEEecCCCEEEEEECC-----CcEEE
Q psy8430 163 GVWDVAVR-PGQPVLGSASA-DR----TVRLWSTQTG-KCVL-QYSGHSGSVNSVRFLPNKDLVLSASGD-----KSVHI 229 (361)
Q Consensus 163 ~V~~l~~~-~~~~~l~s~s~-d~----~i~~wd~~~~-~~~~-~~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~i~l 229 (361)
.+...+|| |||++|+-+.. +| +|+++|+.++ +.+. .+. .....++|+|+++.|+....| ..|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57789999 99997775433 22 5999999988 6321 111 113467899999887776655 24667
Q ss_pred EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEEcCCCCEEEEEeC---CCcEEEeeCCCC
Q psy8430 230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASW---DRVANLFDVETG 303 (361)
Q Consensus 230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~---d~~v~iwd~~~~ 303 (361)
+++.++.. .....+. .+.....++.|+|||++|+..+. ...|+++|+.++
T Consensus 252 ~~lgt~~~------------------------~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 252 HVMGKLQS------------------------EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EETTSCGG------------------------GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EECCCCch------------------------hcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 77654311 0111222 22345678899999999887653 345888899875
No 235
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.86 E-value=0.00045 Score=66.79 Aligned_cols=36 Identities=19% Similarity=0.189 Sum_probs=30.7
Q ss_pred EEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC
Q psy8430 278 DWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313 (361)
Q Consensus 278 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~ 313 (361)
.+...+..++.++.|+.++.||.++|+.+..+....
T Consensus 481 ~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~ 516 (689)
T 1yiq_A 481 TLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAAS 516 (689)
T ss_dssp EEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cceECCCEEEEECCCCcEEEEECCCCccceeeeCCC
Confidence 455578899999999999999999999998887543
No 236
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.81 E-value=0.00023 Score=63.18 Aligned_cols=96 Identities=13% Similarity=-0.041 Sum_probs=72.6
Q ss_pred cEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE----------CCCcEEEEeccccccccCCCCCCCCCCCCCC
Q psy8430 184 TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS----------GDKSVHIWQAVINWECLNNDNDSDLDESKEP 253 (361)
Q Consensus 184 ~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~----------~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 253 (361)
+|.+.|..+++.+.++..-..+ .+.++|+++.++.+. .++.|.+||+.+..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~----------------- 107 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL----------------- 107 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC-----------------
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC-----------------
Confidence 8889999999999998754455 799999999888876 36889999998763
Q ss_pred CCCceecccccEEEeCC-------CCcEEEEEEcCCCCEEEEEeC--CCcEEE--eeCCCCeEEEEee
Q psy8430 254 DESSITLRTPVKELLGH-------SNVVIAADWLSDGEQVITASW--DRVANL--FDVETGTILQSLT 310 (361)
Q Consensus 254 ~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~s~~~--d~~v~i--wd~~~~~~~~~~~ 310 (361)
.+..+... ......++++|+|++++.+.. +..+.+ +|..+ +.++.
T Consensus 108 ---------vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~ 163 (368)
T 1mda_H 108 ---------PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTK 163 (368)
T ss_dssp ---------EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEE
T ss_pred ---------EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEE
Confidence 33444322 123456889999999999875 467888 99987 45553
No 237
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.79 E-value=0.0012 Score=59.46 Aligned_cols=141 Identities=15% Similarity=0.145 Sum_probs=91.9
Q ss_pred cceeeeEEeeccC---CCeEEEEEcCCCCEEEEEe-------------------CCCcEEEEeCCCCeEEEEEeCC--CC
Q psy8430 149 LSCYKIRSFSGHR---DGVWDVAVRPGQPVLGSAS-------------------ADRTVRLWSTQTGKCVLQYSGH--SG 204 (361)
Q Consensus 149 ~~~~~~~~l~~h~---~~V~~l~~~~~~~~l~s~s-------------------~d~~i~~wd~~~~~~~~~~~~h--~~ 204 (361)
.+.+.+.++.... .--+.+.|+|+++.++++. .+.+|.+||+.+++.+.++.-- ..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 4556666665222 2234588899999888884 3689999999999888887742 23
Q ss_pred CeEEEEE--ecCCCEEEEEE------CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceeccc----ccEEEeC---
Q psy8430 205 SVNSVRF--LPNKDLVLSAS------GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRT----PVKELLG--- 269 (361)
Q Consensus 205 ~v~~v~~--~~~~~~l~s~~------~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--- 269 (361)
....+.| +|+++++..++ .+++|.+|....+. +...+ +.....+
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~---------------------~~~~~vIdi~~~~v~~~lp 310 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK---------------------WNAEKVIEIPAEPLEGNLP 310 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE---------------------EEEEEEEEECCEECCSSCC
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc---------------------eeEEEEEeCCCcccccccc
Confidence 4556666 99999876655 66788877654221 00000 0000000
Q ss_pred --------CCCcEEEEEEcCCCCEEEEEeC-CCcEEEeeCC---CCeEEEEee
Q psy8430 270 --------HSNVVIAADWLSDGEQVITASW-DRVANLFDVE---TGTILQSLT 310 (361)
Q Consensus 270 --------~~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~---~~~~~~~~~ 310 (361)
-......+.++|||++|+++.. .+.|.+||+. +.+.+..+.
T Consensus 311 ~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~ 363 (462)
T 2ece_A 311 EILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVK 363 (462)
T ss_dssp GGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEE
T ss_pred ccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEE
Confidence 0235678899999999988776 5789999985 345555554
No 238
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.74 E-value=0.0022 Score=56.89 Aligned_cols=137 Identities=9% Similarity=-0.054 Sum_probs=87.4
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEEeCC---------CCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCC
Q psy8430 173 QPVLGSASADRTVRLWSTQTGKCVLQYSGH---------SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDN 243 (361)
Q Consensus 173 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h---------~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~ 243 (361)
+..++.++.++.|..+|..+|+.+..+... ...+.+. ...++..++.++.++.|..+|..+++...
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W---- 127 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAW---- 127 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEE----
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEE----
Confidence 557888888999999999999887766542 1222221 22246678888899999999998774321
Q ss_pred CCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCCC--------
Q psy8430 244 DSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE-------- 315 (361)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~~-------- 315 (361)
.............. .+..++.++.++.|..+|..+|+.+..+......
T Consensus 128 ----------------------~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~ 183 (376)
T 3q7m_A 128 ----------------------QTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESA 183 (376)
T ss_dssp ----------------------EEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCC
T ss_pred ----------------------EEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCC
Confidence 11111111111112 2457888889999999999999988776543221
Q ss_pred -CeE--EEEEcCCCcccCCCeEEEEcCCCCCCC
Q psy8430 316 -PHI--LCVSSYYSKVSCDLFQRIQHLDCGTSE 345 (361)
Q Consensus 316 -v~~--~~~s~s~~~v~~dg~i~iW~~d~~~~~ 345 (361)
+.. .++.+. .+|.|..+ |..+++
T Consensus 184 ~~~~~~~v~~g~-----~~g~l~~~--d~~tG~ 209 (376)
T 3q7m_A 184 PTTAFGAAVVGG-----DNGRVSAV--LMEQGQ 209 (376)
T ss_dssp CEEETTEEEECC-----TTTEEEEE--ETTTCC
T ss_pred cEEECCEEEEEc-----CCCEEEEE--ECCCCc
Confidence 111 445555 78888888 664443
No 239
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.74 E-value=0.0084 Score=54.02 Aligned_cols=141 Identities=10% Similarity=0.016 Sum_probs=92.5
Q ss_pred ccceeEEeeecC--ccceeeeEEee-------ccCCCeEEEEEcCCCCEEEEEeCC------CcEEEEeCCCCeEEEEEe
Q psy8430 136 QTSKIVSSFKTS--LLSCYKIRSFS-------GHRDGVWDVAVRPGQPVLGSASAD------RTVRLWSTQTGKCVLQYS 200 (361)
Q Consensus 136 ~~~~~~~~~~~~--~~~~~~~~~l~-------~h~~~V~~l~~~~~~~~l~s~s~d------~~i~~wd~~~~~~~~~~~ 200 (361)
..+..+.++... ....+.++++. .....-..+...|+| +++++..+ +.|.+.|..+++.+..+.
T Consensus 103 l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~ 181 (462)
T 2ece_A 103 LRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWE 181 (462)
T ss_dssp TTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECC
T ss_pred CCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEc
Confidence 333444555543 33456666663 111234567788999 77777666 789999999999999987
Q ss_pred CCC---CCeEEEEEecCCCEEEEEE-------------------CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCce
Q psy8430 201 GHS---GSVNSVRFLPNKDLVLSAS-------------------GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSI 258 (361)
Q Consensus 201 ~h~---~~v~~v~~~~~~~~l~s~~-------------------~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (361)
.-. ..-..+-|+|+++.+++.. .+.+|.+||+.+++
T Consensus 182 ~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k---------------------- 239 (462)
T 2ece_A 182 IDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK---------------------- 239 (462)
T ss_dssp SBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE----------------------
T ss_pred cCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc----------------------
Confidence 221 2244688899999888874 36899999987542
Q ss_pred ecccccEEEeCC--CCcEEEEEE--cCCCCEEEEEeC------CCcEEEeeCCCC
Q psy8430 259 TLRTPVKELLGH--SNVVIAADW--LSDGEQVITASW------DRVANLFDVETG 303 (361)
Q Consensus 259 ~~~~~~~~~~~~--~~~v~~~~~--~~~~~~l~s~~~------d~~v~iwd~~~~ 303 (361)
....+... ......+.| +|++++++.++. +++|.+|....|
T Consensus 240 ----~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g 290 (462)
T 2ece_A 240 ----RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG 290 (462)
T ss_dssp ----EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT
T ss_pred ----EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC
Confidence 23334321 123444555 999999988874 567877665544
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.66 E-value=0.0022 Score=55.50 Aligned_cols=153 Identities=10% Similarity=-0.023 Sum_probs=92.5
Q ss_pred eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230 (361)
Q Consensus 151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw 230 (361)
++....+..+...+.++...+++. +..++.++.|..||.. ++.+..+......+.++...+++.+++.. +.+..+
T Consensus 126 g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~ 200 (330)
T 3hxj_A 126 GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAI 200 (330)
T ss_dssp SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEE
T ss_pred CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEE
Confidence 334444444555667777887776 5557778999999998 87777776566677778787777765544 788888
Q ss_pred eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430 231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 310 (361)
Q Consensus 231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 310 (361)
| .++. ...........+.++...++|. +..++.++.+..+|. ++..+..+.
T Consensus 201 d-~~g~--------------------------~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~ 251 (330)
T 3hxj_A 201 N-PDGT--------------------------EKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFK 251 (330)
T ss_dssp C-TTSC--------------------------EEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEE
T ss_pred C-CCCc--------------------------EEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEee
Confidence 8 4432 1222222334566677777664 555666777888874 566665555
Q ss_pred cCCCCCeEEEEE-cCCCcc-cCCCeEEEE
Q psy8430 311 GHDEEPHILCVS-SYYSKV-SCDLFQRIQ 337 (361)
Q Consensus 311 ~h~~~v~~~~~s-~s~~~v-~~dg~i~iW 337 (361)
.....+...++. .+.+.+ +.+|.|..+
T Consensus 252 ~~~~~~~~~~~~~~g~l~v~t~~ggl~~~ 280 (330)
T 3hxj_A 252 TGKRIESSPVIGNTDTIYFGSYDGHLYAI 280 (330)
T ss_dssp CSSCCCSCCEECTTSCEEEECTTCEEEEE
T ss_pred CCCCccccceEcCCCeEEEecCCCCEEEE
Confidence 433332222221 111121 156677777
No 241
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.64 E-value=0.0092 Score=52.80 Aligned_cols=114 Identities=12% Similarity=0.033 Sum_probs=72.1
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCC
Q psy8430 172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESK 251 (361)
Q Consensus 172 ~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~ 251 (361)
++..++.++.++.|..+|..+|+.+..+............ .+..++.++.++.+..+|..++........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~-------- 171 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNL-------- 171 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC--------
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeC--------
Confidence 3557888889999999999999987776643322222222 245777888999999999987743211000
Q ss_pred CCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430 252 EPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 310 (361)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 310 (361)
..+.........++ . .+..++.++.++.+..+|..+|+.+-...
T Consensus 172 ---------~~~~~~~~~~~~~~----~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~ 215 (376)
T 3q7m_A 172 ---------DMPSLSLRGESAPT----T--AFGAAVVGGDNGRVSAVLMEQGQMIWQQR 215 (376)
T ss_dssp ---------CC-----CCCCCCE----E--ETTEEEECCTTTEEEEEETTTCCEEEEEE
T ss_pred ---------CCCceeecCCCCcE----E--ECCEEEEEcCCCEEEEEECCCCcEEEEEe
Confidence 00000111111222 2 24578888889999999999998876665
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.63 E-value=0.0019 Score=55.86 Aligned_cols=148 Identities=7% Similarity=-0.115 Sum_probs=93.9
Q ss_pred eeeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEE
Q psy8430 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230 (361)
Q Consensus 151 ~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lw 230 (361)
++.+..+......+.++.+.+++.+++.+ +.+..|| .+++.+..+......+.++...+++. +..++.++.+..+
T Consensus 166 g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~ 240 (330)
T 3hxj_A 166 GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAI 240 (330)
T ss_dssp SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEE
T ss_pred CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEE
Confidence 44444555555667788888888755544 7899999 77777777665666788888887765 4456677788888
Q ss_pred eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430 231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 310 (361)
Q Consensus 231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 310 (361)
|.... ....+......+.++.+.+++ .++.++.+|.+..+|. +++.+..+.
T Consensus 241 ~~~g~---------------------------~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~ 291 (330)
T 3hxj_A 241 NPDGT---------------------------EKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFE 291 (330)
T ss_dssp CTTSC---------------------------EEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEE
T ss_pred CCCCC---------------------------EeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEE
Confidence 74221 122222222233344555455 5677888888999996 677777665
Q ss_pred cCCCCCeEE-------EEEcCCCcccCCCeEEEE
Q psy8430 311 GHDEEPHIL-------CVSSYYSKVSCDLFQRIQ 337 (361)
Q Consensus 311 ~h~~~v~~~-------~~s~s~~~v~~dg~i~iW 337 (361)
.....+.++ ++.++ .+|.+++.
T Consensus 292 ~~~~~~~~~~~d~~g~l~~gt-----~~G~~~~~ 320 (330)
T 3hxj_A 292 TGSWIIATPVIDENGTIYFGT-----RNGKFYAL 320 (330)
T ss_dssp CSSCCCSCCEECTTCCEEEEC-----TTSCEEEE
T ss_pred cCCccccceEEcCCCEEEEEc-----CCCeEEEE
Confidence 444444442 33344 67777776
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.63 E-value=0.016 Score=48.59 Aligned_cols=148 Identities=9% Similarity=-0.045 Sum_probs=87.7
Q ss_pred CCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCE-EEEEECCCcEEEEecccccccc
Q psy8430 162 DGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL-VLSASGDKSVHIWQAVINWECL 239 (361)
Q Consensus 162 ~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~d~~i~lwd~~~~~~~~ 239 (361)
..+..++|++++. ++++-..++.|..++...+.....+.........++++|++.. +++-...+.|.++++....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~--- 112 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ--- 112 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC---
Confidence 3577899999655 4445556789999999765543333333357899999997555 4455556789998875321
Q ss_pred CCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEEcCCCCEEEEEeCC---CcEEEeeCCCCeEEEEee-cCCC
Q psy8430 240 NNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASWD---RVANLFDVETGTILQSLT-GHDE 314 (361)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~~~~~~~-~h~~ 314 (361)
...+. ........++++|++..|+.+... +.|..+++. +.....+. ..-.
T Consensus 113 ------------------------~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d-g~~~~~~~~~~~~ 167 (267)
T 1npe_A 113 ------------------------RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD-GTNRRILAQDNLG 167 (267)
T ss_dssp ------------------------CEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT-SCCCEEEECTTCS
T ss_pred ------------------------EEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC-CCCcEEEEECCCC
Confidence 11111 122456889999976766665543 678888875 33333332 1112
Q ss_pred CCeEEEEEcC--CCcc--cCCCeEEEE
Q psy8430 315 EPHILCVSSY--YSKV--SCDLFQRIQ 337 (361)
Q Consensus 315 ~v~~~~~s~s--~~~v--~~dg~i~iW 337 (361)
....+.++.. .+++ ...+.|.++
T Consensus 168 ~P~gia~d~~~~~lyv~d~~~~~I~~~ 194 (267)
T 1npe_A 168 LPNGLTFDAFSSQLCWVDAGTHRAECL 194 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCcEEEEcCCCCEEEEEECCCCEEEEE
Confidence 2333444432 2222 255677777
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.53 E-value=0.029 Score=46.89 Aligned_cols=151 Identities=7% Similarity=-0.086 Sum_probs=89.2
Q ss_pred CCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC---CCcEEEEecccccc
Q psy8430 162 DGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG---DKSVHIWQAVINWE 237 (361)
Q Consensus 162 ~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~---d~~i~lwd~~~~~~ 237 (361)
.....+++++++. ++++-...+.|.+++...................++++|++..+..+.. .+.|..+++...
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-- 156 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-- 156 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC--
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC--
Confidence 5678999999655 4555556789999998644322222222356789999996555544443 367877776422
Q ss_pred ccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCCCeEEEEeecCCCC
Q psy8430 238 CLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTGHDEE 315 (361)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~h~~~ 315 (361)
....+. ........++++|++.+|+.+. ..+.|.++|.........+... ..
T Consensus 157 -------------------------~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~-~~ 210 (267)
T 1npe_A 157 -------------------------NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL-QY 210 (267)
T ss_dssp -------------------------CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC-CS
T ss_pred -------------------------CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC-CC
Confidence 111111 2234678899999877776555 4578999999854433333321 11
Q ss_pred CeEEEEEcCCCccc--CCCeEEEEcCCCC
Q psy8430 316 PHILCVSSYYSKVS--CDLFQRIQHLDCG 342 (361)
Q Consensus 316 v~~~~~s~s~~~v~--~dg~i~iW~~d~~ 342 (361)
...+.+.+..++|+ ..+.|.++ |..
T Consensus 211 P~gi~~d~~~lyva~~~~~~v~~~--d~~ 237 (267)
T 1npe_A 211 PFAVTSYGKNLYYTDWKTNSVIAM--DLA 237 (267)
T ss_dssp EEEEEEETTEEEEEETTTTEEEEE--ETT
T ss_pred ceEEEEeCCEEEEEECCCCeEEEE--eCC
Confidence 22333333333332 56788888 663
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.51 E-value=0.0038 Score=60.15 Aligned_cols=73 Identities=11% Similarity=0.112 Sum_probs=54.3
Q ss_pred EEEEcCCCCEEEEEeCCC-------------------cEEEEeCCCCeEEEEEeC--CC-------CCeEEEEEecCCC-
Q psy8430 166 DVAVRPGQPVLGSASADR-------------------TVRLWSTQTGKCVLQYSG--HS-------GSVNSVRFLPNKD- 216 (361)
Q Consensus 166 ~l~~~~~~~~l~s~s~d~-------------------~i~~wd~~~~~~~~~~~~--h~-------~~v~~v~~~~~~~- 216 (361)
.++++|+...++.++.++ .|..+|..+|+.+..++. |. .++....+..+++
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 478888888888887766 399999999998888764 22 2233333334665
Q ss_pred --EEEEEECCCcEEEEeccccccc
Q psy8430 217 --LVLSASGDKSVHIWQAVINWEC 238 (361)
Q Consensus 217 --~l~s~~~d~~i~lwd~~~~~~~ 238 (361)
.++.++.+|.+.++|..+++.+
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEE
T ss_pred EEEEEEECCCCEEEEEECCCCCEe
Confidence 6888999999999999988765
No 246
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.42 E-value=0.01 Score=55.36 Aligned_cols=191 Identities=9% Similarity=0.058 Sum_probs=108.6
Q ss_pred EEeeecCccceeeeEEeeccCCCeEEEEE-c-CCCCEEEEEe------------------CCCcEEEEeCCCCeEEEEEe
Q psy8430 141 VSSFKTSLLSCYKIRSFSGHRDGVWDVAV-R-PGQPVLGSAS------------------ADRTVRLWSTQTGKCVLQYS 200 (361)
Q Consensus 141 ~~~~~~~~~~~~~~~~l~~h~~~V~~l~~-~-~~~~~l~s~s------------------~d~~i~~wd~~~~~~~~~~~ 200 (361)
+...+.....+..+-++..- .....+++ + |++.++++++ .++.+.+.|..+.+...++.
T Consensus 114 VavIdl~t~~~~~ii~ip~g-~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~ 192 (595)
T 1fwx_A 114 VARVRCDVMKCDAILEIPNA-KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVL 192 (595)
T ss_dssp EEEEETTTTEEEEEEECSSC-CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEE
T ss_pred EEEEECCCceEeeEEeCCCC-CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEE
Confidence 33444444333333344322 34778887 5 8999988885 24579999999998888877
Q ss_pred CCCCCeEEEEEecCCCEEEEEECCC---------------cEEEEeccccccccCCCCCCCCCCCCCCCCCceeccc---
Q psy8430 201 GHSGSVNSVRFLPNKDLVLSASGDK---------------SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRT--- 262 (361)
Q Consensus 201 ~h~~~v~~v~~~~~~~~l~s~~~d~---------------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 262 (361)
-- +....++++|+|+++++.+.+. .|.+.|+............... .........+
T Consensus 193 Vg-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i-----~~V~VID~~~~~~ 266 (595)
T 1fwx_A 193 VS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL-----NGVKVVDGRKEAS 266 (595)
T ss_dssp ES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE-----TTEEEEECSGGGC
T ss_pred eC-CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE-----CcEEEEeCcccCC
Confidence 32 2456788999999999888663 4677776544321111000000 0000111111
Q ss_pred -c-cEEEeCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCCCe------------EEEEeecCCCCCeEEEEEcCC-C
Q psy8430 263 -P-VKELLGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGT------------ILQSLTGHDEEPHILCVSSYY-S 326 (361)
Q Consensus 263 -~-~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~------------~~~~~~~h~~~v~~~~~s~s~-~ 326 (361)
. +..+.. .....++.++|||+++++++ .+.+|.++|+.+.+ .+..+..-.+ ...+.+++.+ +
T Consensus 267 ~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~g-P~h~aF~~dG~a 344 (595)
T 1fwx_A 267 SLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLG-PLHTAFDGRGNA 344 (595)
T ss_dssp CSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSC-EEEEEECTTSEE
T ss_pred ceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCC-cceEEECCCCeE
Confidence 1 122211 22445688999999887766 57889999999653 3333332222 2224455432 1
Q ss_pred c--ccCCCeEEEEcCC
Q psy8430 327 K--VSCDLFQRIQHLD 340 (361)
Q Consensus 327 ~--v~~dg~i~iW~~d 340 (361)
+ .--|+.|.+||++
T Consensus 345 Y~t~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 345 YTSLFLDSQVVKWNIE 360 (595)
T ss_dssp EEEETTTTEEEEEEHH
T ss_pred EEEEecCCcEEEEEhh
Confidence 1 2378999999433
No 247
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.40 E-value=0.028 Score=48.51 Aligned_cols=154 Identities=10% Similarity=-0.051 Sum_probs=89.9
Q ss_pred ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC--------------------CCCCeEEEEEec-CCCE
Q psy8430 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG--------------------HSGSVNSVRFLP-NKDL 217 (361)
Q Consensus 159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~--------------------h~~~v~~v~~~~-~~~~ 217 (361)
+.-....+++|+++|+++.++..++.|..|+..++... .+.. ....+..+++.+ +++
T Consensus 16 g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~- 93 (322)
T 2fp8_A 16 APSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ- 93 (322)
T ss_dssp CSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-
T ss_pred CccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-
Confidence 33344667899999987888888999999998765432 2321 013578999998 554
Q ss_pred EEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC-CCCcEEEEEEcC-CCCEEEEEeC----
Q psy8430 218 VLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG-HSNVVIAADWLS-DGEQVITASW---- 291 (361)
Q Consensus 218 l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~s~~~---- 291 (361)
|+.+...+.+..+|..++... .......+ .......+++.+ +|...++-..
T Consensus 94 l~v~d~~~~i~~~d~~~g~~~-----------------------~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~ 150 (322)
T 2fp8_A 94 LYIVDCYYHLSVVGSEGGHAT-----------------------QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYD 150 (322)
T ss_dssp EEEEETTTEEEEECTTCEECE-----------------------EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCC
T ss_pred EEEEECCCCEEEEeCCCCEEE-----------------------EecccCCCCcccccceEEEecCCCEEEEECCccccc
Confidence 445545555888876543110 00000111 123467899999 8987776533
Q ss_pred -------------CCcEEEeeCCCCeEEEEeecCCCCCeEEEEEcCC--Cccc--CCCeEEEEc
Q psy8430 292 -------------DRVANLFDVETGTILQSLTGHDEEPHILCVSSYY--SKVS--CDLFQRIQH 338 (361)
Q Consensus 292 -------------d~~v~iwd~~~~~~~~~~~~h~~~v~~~~~s~s~--~~v~--~dg~i~iW~ 338 (361)
++.|..||..+++.......- .....+.++... ++|+ .++.|.+|+
T Consensus 151 ~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~-~~p~gia~~~dg~~lyv~d~~~~~I~~~~ 213 (322)
T 2fp8_A 151 DRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKEL-HVPGGAEVSADSSFVLVAEFLSHQIVKYW 213 (322)
T ss_dssp TTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEE-SCCCEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred ccccceehcccCCCceEEEEeCCCCEEEEeccCC-ccCcceEECCCCCEEEEEeCCCCeEEEEE
Confidence 367888998877643322211 122234444331 2332 457788883
No 248
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.40 E-value=0.01 Score=49.73 Aligned_cols=132 Identities=6% Similarity=-0.044 Sum_probs=84.1
Q ss_pred ceeeeEEeec-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430 150 SCYKIRSFSG-HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH 228 (361)
Q Consensus 150 ~~~~~~~l~~-h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~ 228 (361)
+++.++++.- .......+++.. +.+.++.-.++.+.++|..+.+.+.++..-... ...++++++.++.+..++.|.
T Consensus 53 tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~ 129 (266)
T 2iwa_A 53 TGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILY 129 (266)
T ss_dssp TCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEE
T ss_pred CCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEE
Confidence 3444555431 112223455553 335555556889999999999999888632122 233556788777777788999
Q ss_pred EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC--C---CCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC
Q psy8430 229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG--H---SNVVIAADWLSDGEQVITASWDRVANLFDVETG 303 (361)
Q Consensus 229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 303 (361)
++|..+... ...+.. + -..++.+.|. +|...+..-.++.|.+.|..++
T Consensus 130 viD~~t~~v--------------------------~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg 182 (266)
T 2iwa_A 130 EIDPHTFKL--------------------------IKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDG 182 (266)
T ss_dssp EECTTTCCE--------------------------EEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTC
T ss_pred EEECCCCcE--------------------------EEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCC
Confidence 999876522 222221 1 1246778887 6754444445789999999999
Q ss_pred eEEEEeec
Q psy8430 304 TILQSLTG 311 (361)
Q Consensus 304 ~~~~~~~~ 311 (361)
+.+.++..
T Consensus 183 ~V~~~I~~ 190 (266)
T 2iwa_A 183 TLLGWILL 190 (266)
T ss_dssp CEEEEEEC
T ss_pred cEEEEEEC
Confidence 99998863
No 249
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.24 E-value=0.0038 Score=58.23 Aligned_cols=146 Identities=10% Similarity=0.004 Sum_probs=91.6
Q ss_pred eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCC--------------------------------------cEEEEeCCC-
Q psy8430 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADR--------------------------------------TVRLWSTQT- 192 (361)
Q Consensus 152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~--------------------------------------~i~~wd~~~- 192 (361)
+.+.++.--. .-..++++|+|.++++++.+. .|.+.|..+
T Consensus 186 ~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~ 264 (595)
T 1fwx_A 186 EVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKE 264 (595)
T ss_dssp EEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGG
T ss_pred eEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCccc
Confidence 4444444211 335577999999988888653 366667666
Q ss_pred -CeE-EEEEeCCCCCeEEEEEecCCCEEEEEE-CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC
Q psy8430 193 -GKC-VLQYSGHSGSVNSVRFLPNKDLVLSAS-GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG 269 (361)
Q Consensus 193 -~~~-~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (361)
++. +..+. -.....++.++|||++++.++ .+.+|.++|+.+........ ......+..-..
T Consensus 265 ~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~---------------l~~~~~v~~~v~ 328 (595)
T 1fwx_A 265 ASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYEN---------------ADPRSAVVAEPE 328 (595)
T ss_dssp GCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSC---------------CCGGGGEEECCB
T ss_pred CCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccc---------------cCcccceEEEcC
Confidence 444 44444 234667899999999876655 57899999998543210000 001111212222
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC----------CeEEEEeecCCC
Q psy8430 270 HSNVVIAADWLSDGEQVITASWDRVANLFDVET----------GTILQSLTGHDE 314 (361)
Q Consensus 270 ~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~----------~~~~~~~~~h~~ 314 (361)
-......++|+|+|...++.--|+.|.+||+.+ .+.+.++..|-.
T Consensus 329 vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yq 383 (595)
T 1fwx_A 329 LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQ 383 (595)
T ss_dssp CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSC
T ss_pred CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccc
Confidence 345678899999994334556689999999987 567777776643
No 250
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.22 E-value=0.027 Score=48.65 Aligned_cols=149 Identities=13% Similarity=0.008 Sum_probs=90.9
Q ss_pred CCeEEEEEcC-CCCEEEEEeC-----------------CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEE-E
Q psy8430 162 DGVWDVAVRP-GQPVLGSASA-----------------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA-S 222 (361)
Q Consensus 162 ~~V~~l~~~~-~~~~l~s~s~-----------------d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-~ 222 (361)
.....+++++ +|.+.++-.. ++.|..||..+++...... .......|+|+|+++.++.+ .
T Consensus 126 ~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~ 204 (322)
T 2fp8_A 126 KWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEF 204 (322)
T ss_dssp SCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEG
T ss_pred cccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeC
Confidence 3478899999 9987776533 3678888987776433222 22345679999999865544 5
Q ss_pred CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC----------C
Q psy8430 223 GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW----------D 292 (361)
Q Consensus 223 ~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----------d 292 (361)
.++.|..|++..... . ....+....+ ...++++++|.+.++... .
T Consensus 205 ~~~~I~~~~~~~~~~-----------------------~-~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~ 259 (322)
T 2fp8_A 205 LSHQIVKYWLEGPKK-----------------------G-TAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVD 259 (322)
T ss_dssp GGTEEEEEESSSTTT-----------------------T-CEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEE
T ss_pred CCCeEEEEECCCCcC-----------------------C-ccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCc
Confidence 568899998763210 0 0111111122 678899999987776654 4
Q ss_pred CcEEEeeCCCCeEEEEeecCCC----CCeEEEEEcCCCccc--CCCeEEEE
Q psy8430 293 RVANLFDVETGTILQSLTGHDE----EPHILCVSSYYSKVS--CDLFQRIQ 337 (361)
Q Consensus 293 ~~v~iwd~~~~~~~~~~~~h~~----~v~~~~~s~s~~~v~--~dg~i~iW 337 (361)
+.|..+|.. |+.+..+....+ .+..++...+.++|+ .++.|..+
T Consensus 260 ~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~ 309 (322)
T 2fp8_A 260 PKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGIL 309 (322)
T ss_dssp EEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEE
T ss_pred cEEEEECCC-CCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEE
Confidence 668888874 787777765432 233333322222222 56667777
No 251
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.16 E-value=0.0085 Score=57.68 Aligned_cols=35 Identities=11% Similarity=0.225 Sum_probs=29.5
Q ss_pred EcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC
Q psy8430 279 WLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313 (361)
Q Consensus 279 ~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~ 313 (361)
+...+.+++.++.|+.++.||.++|+.+..+....
T Consensus 465 ~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 465 LSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred eEeCCCEEEEECCcccchhhhhhcChhheEecCCC
Confidence 34468899999999999999999999998886543
No 252
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.13 E-value=0.027 Score=46.82 Aligned_cols=115 Identities=10% Similarity=0.005 Sum_probs=72.5
Q ss_pred EEEEEeCCCCC--eEEEEEecCCCEEEEEECCC--cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCC
Q psy8430 195 CVLQYSGHSGS--VNSVRFLPNKDLVLSASGDK--SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGH 270 (361)
Q Consensus 195 ~~~~~~~h~~~--v~~v~~~~~~~~l~s~~~d~--~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (361)
.+.++. |... ...+.|+ ++.++.+.+.+| .|+.+|+.+++. ...+...
T Consensus 33 vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv--------------------------~~~~~l~ 84 (262)
T 3nol_A 33 IVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKT--------------------------LQQIELG 84 (262)
T ss_dssp EEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCE--------------------------EEEEECC
T ss_pred EEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcE--------------------------EEEEecC
Confidence 456665 6554 4889998 677777777766 899999987743 2222222
Q ss_pred C-CcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCCCeEEEEeecCCCCCeE-----EEEEcCCCcccCCCeEEEEcCCCCC
Q psy8430 271 S-NVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTGHDEEPHI-----LCVSSYYSKVSCDLFQRIQHLDCGT 343 (361)
Q Consensus 271 ~-~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~h~~~v~~-----~~~s~s~~~v~~dg~i~iW~~d~~~ 343 (361)
. ...-.+++ ++..|+... .++.+.+||..+++.+.++......... .++..+ .++.|.++ |..|
T Consensus 85 ~~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~glt~dg~~L~~Sd-----Gs~~i~~i--Dp~T 155 (262)
T 3nol_A 85 KRYFGEGISD--WKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGWGLTHNDQYLIMSD-----GTPVLRFL--DPES 155 (262)
T ss_dssp TTCCEEEEEE--ETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCCEEECSSCEEECC-----SSSEEEEE--CTTT
T ss_pred CccceeEEEE--eCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCceEEecCCCEEEEEC-----CCCeEEEE--cCCC
Confidence 1 12233444 455666555 4788999999999999998753322111 233334 56778888 8866
Q ss_pred CCC
Q psy8430 344 SEN 346 (361)
Q Consensus 344 ~~~ 346 (361)
.+.
T Consensus 156 ~~v 158 (262)
T 3nol_A 156 LTP 158 (262)
T ss_dssp CSE
T ss_pred CeE
Confidence 443
No 253
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.13 E-value=0.042 Score=51.73 Aligned_cols=72 Identities=15% Similarity=0.030 Sum_probs=48.0
Q ss_pred EEEcCCCCEEEEEeCC----------------CcEEEEeCCCCeEEEEEeC--CC--------CCeEEEEEecCCC---E
Q psy8430 167 VAVRPGQPVLGSASAD----------------RTVRLWSTQTGKCVLQYSG--HS--------GSVNSVRFLPNKD---L 217 (361)
Q Consensus 167 l~~~~~~~~l~s~s~d----------------~~i~~wd~~~~~~~~~~~~--h~--------~~v~~v~~~~~~~---~ 217 (361)
+++++....++.+..+ +.|..+|..+|+.+-.++. |. .++. +...++|+ .
T Consensus 240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~ 318 (571)
T 2ad6_A 240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPL 318 (571)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEE
T ss_pred EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEE
Confidence 5677766666655532 3599999999998877763 21 1222 22224674 5
Q ss_pred EEEEECCCcEEEEecccccccc
Q psy8430 218 VLSASGDKSVHIWQAVINWECL 239 (361)
Q Consensus 218 l~s~~~d~~i~lwd~~~~~~~~ 239 (361)
++.++.+|.+.++|..+++.+.
T Consensus 319 v~~~~~~G~l~~lD~~tG~~~w 340 (571)
T 2ad6_A 319 LSHIDRNGILYTLNRENGNLIV 340 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEE
T ss_pred EEEeCCCcEEEEEECCCCCEEe
Confidence 7788899999999998886543
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.11 E-value=0.023 Score=47.31 Aligned_cols=131 Identities=10% Similarity=0.006 Sum_probs=84.3
Q ss_pred ccceeeeEEeeccCCCeE--EEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCC
Q psy8430 148 LLSCYKIRSFSGHRDGVW--DVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK 225 (361)
Q Consensus 148 ~~~~~~~~~l~~h~~~V~--~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~ 225 (361)
..+++.++.+ - ..... .+++..+ .+....-.++.+.+||..+.+.+.++... ..-..++ +++..|+.+..++
T Consensus 82 ~~Tgkv~~~~-l-~~~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~ 155 (268)
T 3nok_A 82 LESAQPVWME-R-LGNIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGT 155 (268)
T ss_dssp SSCSSCSEEE-E-CTTCCEEEEEECSS-CEEEEESSSCEEEEEETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSS
T ss_pred CCCCcEEeEE-C-CCCcceeEEEEeCC-EEEEEEccCCEEEEEECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCC
Confidence 3445555554 1 12232 3555432 35555567899999999999999998843 2223444 4678887777788
Q ss_pred cEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeC--CC---CcEEEEEEcCCCCEEEEEeCCCcEEEeeC
Q psy8430 226 SVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLG--HS---NVVIAADWLSDGEQVITASWDRVANLFDV 300 (361)
Q Consensus 226 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 300 (361)
.|.++|..+.+. ...+.. +. ..++.+.|. +|...+..-.++.|.+.|.
T Consensus 156 ~l~~iDp~T~~v--------------------------~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 156 MLTFHEPDGFAL--------------------------VGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDP 208 (268)
T ss_dssp EEEEECTTTCCE--------------------------EEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECT
T ss_pred EEEEEcCCCCeE--------------------------EEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeC
Confidence 999999876532 222221 11 245667776 6754444445788999999
Q ss_pred CCCeEEEEeec
Q psy8430 301 ETGTILQSLTG 311 (361)
Q Consensus 301 ~~~~~~~~~~~ 311 (361)
.+|+.+..+..
T Consensus 209 ~TG~V~~~Idl 219 (268)
T 3nok_A 209 ATGTVVGVIDA 219 (268)
T ss_dssp TTCBEEEEEEC
T ss_pred CCCcEEEEEEC
Confidence 99999988863
No 255
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.09 E-value=0.036 Score=52.29 Aligned_cols=73 Identities=7% Similarity=-0.051 Sum_probs=50.4
Q ss_pred EEEEcCCCCEEEEEeC--------------------C----CcEEEEeCCCCeEEEEEeC--CC--------CCeEEEEE
Q psy8430 166 DVAVRPGQPVLGSASA--------------------D----RTVRLWSTQTGKCVLQYSG--HS--------GSVNSVRF 211 (361)
Q Consensus 166 ~l~~~~~~~~l~s~s~--------------------d----~~i~~wd~~~~~~~~~~~~--h~--------~~v~~v~~ 211 (361)
.++++|...+++.+.. | +.|..+|..+|+.+-.++. |. .++. +..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence 3567777677666653 2 5899999999998887753 32 1222 122
Q ss_pred e-cCCC---EEEEEECCCcEEEEecccccccc
Q psy8430 212 L-PNKD---LVLSASGDKSVHIWQAVINWECL 239 (361)
Q Consensus 212 ~-~~~~---~l~s~~~d~~i~lwd~~~~~~~~ 239 (361)
. .+|+ .++.++.+|.+.++|..+++.+.
T Consensus 329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw 360 (582)
T 1flg_A 329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQN 360 (582)
T ss_dssp ECSSSCEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred ecCCCCEEEEEEEECCCceEEEEECCCCCEec
Confidence 1 3564 67889999999999998887654
No 256
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.04 E-value=0.017 Score=54.43 Aligned_cols=31 Identities=23% Similarity=0.195 Sum_probs=26.9
Q ss_pred CCCEEEEEeCCCcEEEeeCCCCeEEEEeecC
Q psy8430 282 DGEQVITASWDRVANLFDVETGTILQSLTGH 312 (361)
Q Consensus 282 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h 312 (361)
.+..++.++.|+.|+.||.++|+.+.++...
T Consensus 474 ~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 474 KGGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 5678888999999999999999999888744
No 257
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.01 E-value=0.063 Score=50.77 Aligned_cols=73 Identities=12% Similarity=0.037 Sum_probs=50.7
Q ss_pred EEEEcCCCCEEEEEeCC----------------CcEEEEeCCCCeEEEEEeCCCC----------CeEEEEEe-cCC---
Q psy8430 166 DVAVRPGQPVLGSASAD----------------RTVRLWSTQTGKCVLQYSGHSG----------SVNSVRFL-PNK--- 215 (361)
Q Consensus 166 ~l~~~~~~~~l~s~s~d----------------~~i~~wd~~~~~~~~~~~~h~~----------~v~~v~~~-~~~--- 215 (361)
..++++...+++.+..+ +.|..+|..+|+.+-.++.... ++. +... .+|
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~ 323 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKAR 323 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEE
Confidence 35677777777777655 3799999999998877764221 122 2222 456
Q ss_pred CEEEEEECCCcEEEEecccccccc
Q psy8430 216 DLVLSASGDKSVHIWQAVINWECL 239 (361)
Q Consensus 216 ~~l~s~~~d~~i~lwd~~~~~~~~ 239 (361)
..++.++.+|.+.++|..+++.+.
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~lw 347 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALVS 347 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEE
T ss_pred EEEEEECCCcEEEEEECCCCCEee
Confidence 467778899999999998886643
No 258
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.00 E-value=0.1 Score=44.65 Aligned_cols=124 Identities=17% Similarity=0.107 Sum_probs=75.4
Q ss_pred eeeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCC--cEEE
Q psy8430 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK--SVHI 229 (361)
Q Consensus 152 ~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~--~i~l 229 (361)
+.+..+... .....++|+++|.++++-..++.|..||.... ....+. ....+..+++.++++++++..... .|..
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEE
Confidence 344444333 45778999999998777778899999998653 333333 346789999999999766654433 3555
Q ss_pred EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCC
Q psy8430 230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG 303 (361)
Q Consensus 230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~ 303 (361)
++..++... .+... ........++..+.+..+++-..++.|+++|..++
T Consensus 100 ~d~~~g~~~------------------------~~~~~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 100 LVKSDGTVE------------------------TLLTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp EECTTSCEE------------------------EEEEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred EcCCCCeEE------------------------EEEeC-CCccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 665443110 01111 11223344455555444444445788989998764
No 259
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.97 E-value=0.074 Score=43.73 Aligned_cols=107 Identities=7% Similarity=0.084 Sum_probs=73.2
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCC
Q psy8430 174 PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEP 253 (361)
Q Consensus 174 ~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~ 253 (361)
.+....-.++.+.+||..+.+.+.++.... .=..++ +++..|+.+..++.|.++|..+...
T Consensus 76 ~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~---------------- 136 (243)
T 3mbr_X 76 RLIQLTWRNHEGFVYDLATLTPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQ---------------- 136 (243)
T ss_dssp EEEEEESSSSEEEEEETTTTEEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCE----------------
T ss_pred EEEEEEeeCCEEEEEECCcCcEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeE----------------
Confidence 344455568899999999999999988432 223444 5677777777788999999876532
Q ss_pred CCCceecccccEEEeC--CC---CcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430 254 DESSITLRTPVKELLG--HS---NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 310 (361)
Q Consensus 254 ~~~~~~~~~~~~~~~~--~~---~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 310 (361)
...+.. +. ..++.+.|. +|...+..-.+..|.+.|..+|+.+..+.
T Consensus 137 ----------~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~id 187 (243)
T 3mbr_X 137 ----------VGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWID 187 (243)
T ss_dssp ----------EEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEE
T ss_pred ----------EEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEE
Confidence 222221 11 245566665 56544444457889999999999998886
No 260
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.92 E-value=0.077 Score=44.14 Aligned_cols=127 Identities=9% Similarity=0.117 Sum_probs=84.4
Q ss_pred EEeeccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeC-CCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430 155 RSFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSG-HSGSVNSVRFLPNKDLVLSASGDKSVHIWQA 232 (361)
Q Consensus 155 ~~l~~h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~ 232 (361)
+.+.|-.+.+..++|+|++. ++++...++.|...|.. ++.+..+.- -..-.-.|++.+++.++++.-.++.+.++++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 45667667899999999766 55557778899999997 887777642 2256788899888877676667788999887
Q ss_pred cccccccCCCCCCCCCCCCCCCCCceecccccEEE--eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCC
Q psy8430 233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKEL--LGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 301 (361)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 301 (361)
...... .........+ .........++|+|.++.|+++.......+|.+.
T Consensus 99 ~~~~~i-------------------~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 99 TPNSEV-------------------KILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp CTTCCE-------------------EEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred CCCCee-------------------eeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 543210 0000000000 1234457899999999888887766555555543
No 261
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.82 E-value=0.027 Score=55.06 Aligned_cols=70 Identities=13% Similarity=0.018 Sum_probs=47.5
Q ss_pred EEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCe--EEEEEe-CCCCCeEEEEEecCCCEEEEEECC---CcEEEEecc
Q psy8430 165 WDVAVRPGQPVLGSASAD-----RTVRLWSTQTGK--CVLQYS-GHSGSVNSVRFLPNKDLVLSASGD---KSVHIWQAV 233 (361)
Q Consensus 165 ~~l~~~~~~~~l~s~s~d-----~~i~~wd~~~~~--~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d---~~i~lwd~~ 233 (361)
..+.|+|||+.|+....| ..|.++++.++. ....+. ........+.|+|+|++|+..+.+ ..|.++|+.
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 457899999877777665 258888887763 233443 233456788999999987765432 357777775
Q ss_pred c
Q psy8430 234 I 234 (361)
Q Consensus 234 ~ 234 (361)
+
T Consensus 304 ~ 304 (751)
T 2xe4_A 304 K 304 (751)
T ss_dssp S
T ss_pred C
Confidence 4
No 262
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.73 E-value=0.052 Score=48.37 Aligned_cols=118 Identities=13% Similarity=0.119 Sum_probs=78.9
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe------------EEEEEeC------CCCCeEEEEEec---CCCEEEEE
Q psy8430 163 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGK------------CVLQYSG------HSGSVNSVRFLP---NKDLVLSA 221 (361)
Q Consensus 163 ~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~------------~~~~~~~------h~~~v~~v~~~~---~~~~l~s~ 221 (361)
.|..+..+|+|.+||..+. .+|.|-.+..+. ....+.- ...+|..+.|+| .+..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 5788999999999998865 488887776321 1223331 257899999999 45689999
Q ss_pred ECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe--CCCcEEE
Q psy8430 222 SGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS--WDRVANL 297 (361)
Q Consensus 222 ~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~v~i 297 (361)
..|+.|++||+......+. .................|.+++|.++|-.|+..+ ..|-|+-
T Consensus 146 tsD~~Ir~yDl~~s~~~P~----------------~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI----------------VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE----------------EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred ecCCEEEEEEcccCCCCCc----------------chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 9999999999976322111 0000001112223346788999999887777755 7787765
No 263
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.71 E-value=0.011 Score=55.98 Aligned_cols=33 Identities=24% Similarity=0.300 Sum_probs=28.1
Q ss_pred CCCEEEEEeCCCcEEEeeCCCCeEEEEeecCCC
Q psy8430 282 DGEQVITASWDRVANLFDVETGTILQSLTGHDE 314 (361)
Q Consensus 282 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~~ 314 (361)
.+..++.++.|+.++.||.++|+.+-++....+
T Consensus 496 agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g 528 (582)
T 1flg_A 496 AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSG 528 (582)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred CCCEEEEECCCCcEEEEECCCCCEEEEecCCCC
Confidence 467888899999999999999999988875443
No 264
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.70 E-value=0.075 Score=50.27 Aligned_cols=32 Identities=22% Similarity=0.269 Sum_probs=27.4
Q ss_pred CCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC
Q psy8430 282 DGEQVITASWDRVANLFDVETGTILQSLTGHD 313 (361)
Q Consensus 282 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~ 313 (361)
.+..++.++.|+.++.||.++|+.+-++....
T Consensus 483 agg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~ 514 (599)
T 1w6s_A 483 AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPS 514 (599)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cCCEEEEECCCCeEEEEECCCCCEEEEeeCCC
Confidence 57788889999999999999999998876443
No 265
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.69 E-value=0.11 Score=46.91 Aligned_cols=151 Identities=12% Similarity=0.053 Sum_probs=88.1
Q ss_pred CeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEEC-CC----cEEEEeccccc
Q psy8430 163 GVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASG-DK----SVHIWQAVINW 236 (361)
Q Consensus 163 ~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~-d~----~i~lwd~~~~~ 236 (361)
....++++| ++..|..+...+.|+.+|+..+... .+.........|+|+++++.|+.+.. ++ .+..++.. +.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cc
Confidence 457899998 3555555555588999999776644 33335667899999999996555544 22 23333321 10
Q ss_pred cccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCCCCeEEEEeecCC-C
Q psy8430 237 ECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTGHD-E 314 (361)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~h~-~ 314 (361)
.. ....+. .......++++| +|..+++-..++.|..+|..++.......... .
T Consensus 216 ---------------------~~---~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~ 270 (430)
T 3tc9_A 216 ---------------------FK---VITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSG 270 (430)
T ss_dssp ---------------------SC---SEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSS
T ss_pred ---------------------ee---eeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCC
Confidence 00 001111 123456778999 67766666677899999998765422222211 2
Q ss_pred CCeEEEEEcCC--Ccc--cCCCeEEEEcCC
Q psy8430 315 EPHILCVSSYY--SKV--SCDLFQRIQHLD 340 (361)
Q Consensus 315 ~v~~~~~s~s~--~~v--~~dg~i~iW~~d 340 (361)
....+.+.+.+ ++| ...+.|..++.|
T Consensus 271 ~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 271 WEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 23445555442 233 256778787444
No 266
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.60 E-value=0.25 Score=43.18 Aligned_cols=114 Identities=7% Similarity=-0.041 Sum_probs=73.0
Q ss_pred CCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC-EEEEEECC-CcEEEEeccccccc
Q psy8430 162 DGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGD-KSVHIWQAVINWEC 238 (361)
Q Consensus 162 ~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d-~~i~lwd~~~~~~~ 238 (361)
.....+++++. +.++++-...+.|.+.++........+.........++++|.+. ++++-..+ +.|..+++...
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~--- 192 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS--- 192 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC---
Confidence 44568899874 44556666678999999875443333334446789999998555 45554444 67777776432
Q ss_pred cCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCC
Q psy8430 239 LNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVET 302 (361)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~ 302 (361)
....+ ...-.....++|+|++..|+.+. ..+.|..+|+..
T Consensus 193 ------------------------~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 193 ------------------------GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp ------------------------SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ------------------------CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 11111 12234578899998777776665 456799999864
No 267
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.59 E-value=0.38 Score=47.11 Aligned_cols=116 Identities=13% Similarity=0.044 Sum_probs=80.3
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC--------CCCCeEEEEEecCCCEEEEEECCCcEEEEec
Q psy8430 161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG--------HSGSVNSVRFLPNKDLVLSASGDKSVHIWQA 232 (361)
Q Consensus 161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~--------h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~ 232 (361)
...|.++..+++|.+. .|+.++-|..|+..++........ ....|.++...++++.|..|+.++-+..||.
T Consensus 356 ~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp CSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred CCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence 3569999999988655 466777788999877654332211 2467899999888885667788778999997
Q ss_pred cccccccCCCCCCCCCCCCCCCCCceecccccEEEe-----CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEE
Q psy8430 233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELL-----GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL 306 (361)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 306 (361)
.++.. ..+. .....|.++...++|...+.. . +-+.+||..+++..
T Consensus 435 ~~~~~---------------------------~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~ 484 (795)
T 4a2l_A 435 NSGQV---------------------------ENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFT 484 (795)
T ss_dssp TTCCE---------------------------EEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEE
T ss_pred CCCcE---------------------------EEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEE
Confidence 65421 1111 234578999998888766554 4 45889998877654
No 268
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.45 E-value=0.44 Score=42.23 Aligned_cols=154 Identities=10% Similarity=-0.052 Sum_probs=88.7
Q ss_pred cCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC-EEEEEECCCcEEEEecccccc
Q psy8430 160 HRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWE 237 (361)
Q Consensus 160 h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~lwd~~~~~~ 237 (361)
....+..++|++.+. ++++-...+.|..++...+.....+.........+++.+.+. ++++-...+.|.+.++....
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~- 192 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH- 192 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS-
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-
Confidence 345578999998555 555555678899999876654433333334567888987544 45555566778887764321
Q ss_pred ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC--CcEEEeeCCCCeEEEEeec-CCC
Q psy8430 238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD--RVANLFDVETGTILQSLTG-HDE 314 (361)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--~~v~iwd~~~~~~~~~~~~-h~~ 314 (361)
....+...-.....++++|.+.+|+.+... +.|..+++.. .....+.. .-.
T Consensus 193 -------------------------~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~~~ 246 (386)
T 3v65_B 193 -------------------------RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG-SGRRIIADTHLF 246 (386)
T ss_dssp -------------------------CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEEEECSSCS
T ss_pred -------------------------eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC-CCcEEEEECCCC
Confidence 111122233567889999877776666543 5688888763 33333321 111
Q ss_pred CCeEEEEEcC--CCcc--cCCCeEEEEcCC
Q psy8430 315 EPHILCVSSY--YSKV--SCDLFQRIQHLD 340 (361)
Q Consensus 315 ~v~~~~~s~s--~~~v--~~dg~i~iW~~d 340 (361)
....+.+... .+++ ...+.|..+++|
T Consensus 247 ~PnGlavd~~~~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 247 WPNGLTIDYAGRRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp CEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred CeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 2233444422 2222 256677777443
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.35 E-value=0.46 Score=41.44 Aligned_cols=153 Identities=10% Similarity=-0.056 Sum_probs=88.7
Q ss_pred CCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCC-CEEEEEECCCcEEEEeccccccc
Q psy8430 161 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWEC 238 (361)
Q Consensus 161 ~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i~lwd~~~~~~~ 238 (361)
...+..++|++... ++.+-...+.|..+++..+.....+.........+++.+.+ .++++-...+.|.+.++....
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-- 149 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-- 149 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS--
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc--
Confidence 34578999997555 44455567889999987665443333333556789998754 455565667889998875321
Q ss_pred cCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC-C-CcEEEeeCCCCeEEEEeecC-CCC
Q psy8430 239 LNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-D-RVANLFDVETGTILQSLTGH-DEE 315 (361)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d-~~v~iwd~~~~~~~~~~~~h-~~~ 315 (361)
....+...-.....++++|.+.+|+.+.. . +.|..+++. |.....+... -..
T Consensus 150 ------------------------~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~~~~~ 204 (349)
T 3v64_C 150 ------------------------RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD-GSGRRIIADTHLFW 204 (349)
T ss_dssp ------------------------CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEESCCSSCSC
T ss_pred ------------------------eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC-CCCcEEEEECCCCC
Confidence 11112233356788999997666665554 3 678888876 3333333221 112
Q ss_pred CeEEEEEcC--CCcc--cCCCeEEEEcCC
Q psy8430 316 PHILCVSSY--YSKV--SCDLFQRIQHLD 340 (361)
Q Consensus 316 v~~~~~s~s--~~~v--~~dg~i~iW~~d 340 (361)
...+.+... .+++ ...+.|..+++|
T Consensus 205 PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 205 PNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 233444422 2222 255677777444
No 270
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.21 E-value=0.65 Score=45.50 Aligned_cols=121 Identities=10% Similarity=-0.054 Sum_probs=78.1
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe----CCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccc
Q psy8430 161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS----GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW 236 (361)
Q Consensus 161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~----~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~ 236 (361)
...|.++..+++|..|..|+.++-+..||..+++...... .....|.++...+++.+.+.. . +-+.+||..++.
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~ 482 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRS 482 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTE
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCe
Confidence 3679999999988856667777779999998776433221 134678999988887765544 4 458888876542
Q ss_pred cccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430 237 ECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI 305 (361)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 305 (361)
.... ......-......|.++...++|...+.+. +-+..||..+++.
T Consensus 483 ~~~~--------------------~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 483 FTTI--------------------EKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI 529 (795)
T ss_dssp EEEC--------------------CBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE
T ss_pred EEEc--------------------cccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE
Confidence 1100 000000011235788999998887666554 4588899887765
No 271
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.20 E-value=0.1 Score=44.97 Aligned_cols=119 Identities=8% Similarity=0.005 Sum_probs=79.8
Q ss_pred eEEEEE---cCCCCEEEEEe-------------CCCcEEEEeCC---CCeEEEEEe--C-----------CCCCeEEEEE
Q psy8430 164 VWDVAV---RPGQPVLGSAS-------------ADRTVRLWSTQ---TGKCVLQYS--G-----------HSGSVNSVRF 211 (361)
Q Consensus 164 V~~l~~---~~~~~~l~s~s-------------~d~~i~~wd~~---~~~~~~~~~--~-----------h~~~v~~v~~ 211 (361)
+..|.| +|++.++++.. .+..+..+|+. +++.+.... . -......++.
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav 144 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ 144 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence 578999 68877777544 26789999998 776654443 1 1135889999
Q ss_pred ecCCCEEEEEECC-CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe
Q psy8430 212 LPNKDLVLSASGD-KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS 290 (361)
Q Consensus 212 ~~~~~~l~s~~~d-~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 290 (361)
.++|+..++++.- +.|...+....... .+....+ ........+.++++|+|..|++..
T Consensus 145 D~~GnaYVt~s~~~~~I~rV~pdG~~~~------------------~~~~~~~---~~~~~~G~nGIv~~pdg~~Liv~~ 203 (334)
T 2p9w_A 145 DRDGNSYVAFALGMPAIARVSADGKTVS------------------TFAWESG---NGGQRPGYSGITFDPHSNKLIAFG 203 (334)
T ss_dssp CTTSCEEEEEEESSCEEEEECTTSCCEE------------------EEEECCC---CSSSCCSCSEEEEETTTTEEEEES
T ss_pred CCCCCEEEeCCCCCCeEEEEeCCCCEEe------------------eeeecCC---CcccccCcceEEEeCCCCEEEEEc
Confidence 9999999998887 77666665322000 0000000 011123466889999999999887
Q ss_pred CCCcEEEeeCCCC
Q psy8430 291 WDRVANLFDVETG 303 (361)
Q Consensus 291 ~d~~v~iwd~~~~ 303 (361)
..|.+..+|+.+.
T Consensus 204 ~~g~L~~fD~~~p 216 (334)
T 2p9w_A 204 GPRALTAFDVSKP 216 (334)
T ss_dssp SSSSEEEEECSSS
T ss_pred CCCeEEEEcCCCC
Confidence 7999999998753
No 272
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.16 E-value=0.54 Score=40.30 Aligned_cols=153 Identities=8% Similarity=-0.101 Sum_probs=86.6
Q ss_pred CCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCC----CeEEEEEeCCCCCeEEEEEecCC-CEEEEEECCCcEEEEeccc
Q psy8430 161 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQT----GKCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVI 234 (361)
Q Consensus 161 ~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~----~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i~lwd~~~ 234 (361)
...+..++|++.+. ++++-...+.|..+++.. ......+.........+++.+.+ +++++-...+.|.+.++..
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 45578999998655 555555668999999875 22222233233456889998754 4555656778899998753
Q ss_pred cccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC--CcEEEeeCCCCeEEEEeecC
Q psy8430 235 NWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD--RVANLFDVETGTILQSLTGH 312 (361)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--~~v~iwd~~~~~~~~~~~~h 312 (361)
.. ..............++++|.+.+|+.+... +.|..+++. |.....+...
T Consensus 109 ~~--------------------------~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~ 161 (316)
T 1ijq_A 109 VK--------------------------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTE 161 (316)
T ss_dssp SS--------------------------EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECS
T ss_pred Cc--------------------------eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEEC
Confidence 21 111122233567889999977766666543 678888875 4433333221
Q ss_pred C-CCCeEEEEEcC--CCcc--cCCCeEEEEcCC
Q psy8430 313 D-EEPHILCVSSY--YSKV--SCDLFQRIQHLD 340 (361)
Q Consensus 313 ~-~~v~~~~~s~s--~~~v--~~dg~i~iW~~d 340 (361)
. .....+.+... .+++ ...+.|..+++|
T Consensus 162 ~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 162 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 1 22223444422 2222 156677777444
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.02 E-value=0.52 Score=42.52 Aligned_cols=153 Identities=12% Similarity=0.114 Sum_probs=86.6
Q ss_pred CCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECC---Cc-EEEEecccc
Q psy8430 162 DGVWDVAVRPG--QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGD---KS-VHIWQAVIN 235 (361)
Q Consensus 162 ~~V~~l~~~~~--~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d---~~-i~lwd~~~~ 235 (361)
.....++|+|+ ...|..+...+.|+.+|..++.... +.........++|+++++++++.... .. +...+....
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence 34678999984 3344444444899999998776543 44455678999999999955554322 12 222222111
Q ss_pred ccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEeeCCCCeEEEEee-cCC
Q psy8430 236 WECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLT-GHD 313 (361)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-~h~ 313 (361)
.. ....+. .......++++| +|.++++-..++.|+.+|..++.....+. ...
T Consensus 218 ----------------------~~---~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~ 271 (433)
T 4hw6_A 218 ----------------------FT---ERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT 271 (433)
T ss_dssp ----------------------TC---CEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC
T ss_pred ----------------------ee---cccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC
Confidence 00 001111 233456688999 67666666677889999998777633332 111
Q ss_pred CC-CeEEEEEcCC--Ccc--cCCCeEEEEcCCC
Q psy8430 314 EE-PHILCVSSYY--SKV--SCDLFQRIQHLDC 341 (361)
Q Consensus 314 ~~-v~~~~~s~s~--~~v--~~dg~i~iW~~d~ 341 (361)
.. ...+.+++.. +++ ...+.|+.+++|.
T Consensus 272 ~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 272 KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNR 304 (433)
T ss_dssp CSSCEEEEECTTSSEEEEEETTTTEEEEEEBCT
T ss_pred CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCC
Confidence 11 2234454442 233 2566777774443
No 274
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.96 E-value=0.15 Score=46.04 Aligned_cols=116 Identities=9% Similarity=0.074 Sum_probs=70.8
Q ss_pred ccCCCeEEEEEcCCCCEEEEEeC-CC----cEEEEeCCCCeE--EEEEeCCCCCeEEEEEec-CCCEEEEEECCCcEEEE
Q psy8430 159 GHRDGVWDVAVRPGQPVLGSASA-DR----TVRLWSTQTGKC--VLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIW 230 (361)
Q Consensus 159 ~h~~~V~~l~~~~~~~~l~s~s~-d~----~i~~wd~~~~~~--~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~lw 230 (361)
........++|+++|+.|+.+.. ++ .+.+++. .+.. ...+. .......++++| ++.++++-..++.|..+
T Consensus 176 ~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~ 253 (430)
T 3tc9_A 176 SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRY 253 (430)
T ss_dssp CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEE
T ss_pred cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEE
Confidence 34566889999999995555544 22 2333443 2311 12232 234457788999 67777776678899999
Q ss_pred eccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEeeCC
Q psy8430 231 QAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVE 301 (361)
Q Consensus 231 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~ 301 (361)
+...+.. ..+.. .+.......++|+|+|++|+.+ ...+.|..++..
T Consensus 254 ~~~~~~~------------------------~~~~~-~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 254 DFTTQET------------------------TPLFT-IQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp ETTTTEE------------------------EEEEE-CSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ECCCCcE------------------------EEEEE-cCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 8764311 01111 1122456789999999965555 456788888765
No 275
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.93 E-value=0.63 Score=40.46 Aligned_cols=137 Identities=11% Similarity=0.180 Sum_probs=82.7
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC----CC---EEEEEEC---CCcEEEEecc--cccccc
Q psy8430 172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN----KD---LVLSASG---DKSVHIWQAV--INWECL 239 (361)
Q Consensus 172 ~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~----~~---~l~s~~~---d~~i~lwd~~--~~~~~~ 239 (361)
...+++.....+-+.+||+ +|+.+..+.. +.++.|..-|+ ++ ++++... +.+|.+|++. ++
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~---- 111 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG---- 111 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC----
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC----
Confidence 4457777778889999999 8888888763 67888888773 22 2333343 5789999763 22
Q ss_pred CCCCCCCCCCCCCCCCCceecccccEEE-------eCCCCcEEEEEE--cCC-CC-EEEEEeCCCcEEEeeCC-------
Q psy8430 240 NNDNDSDLDESKEPDESSITLRTPVKEL-------LGHSNVVIAADW--LSD-GE-QVITASWDRVANLFDVE------- 301 (361)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~--~~~-~~-~l~s~~~d~~v~iwd~~------- 301 (361)
++..+ ...-..++.+++ +|. +. +++....+|.+..|++.
T Consensus 112 -----------------------~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~ 168 (355)
T 3amr_A 112 -----------------------TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYI 168 (355)
T ss_dssp -----------------------CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCE
T ss_pred -----------------------ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcc
Confidence 11111 011145566666 674 44 68888888999999882
Q ss_pred CCeEEEEeecCCCCCeEEEEEc--CCCccc-CCCeEEEEcCCC
Q psy8430 302 TGTILQSLTGHDEEPHILCVSS--YYSKVS-CDLFQRIQHLDC 341 (361)
Q Consensus 302 ~~~~~~~~~~h~~~v~~~~~s~--s~~~v~-~dg~i~iW~~d~ 341 (361)
+++.++++...+ .+..+++-. +.++++ .|.. ||.+|.
T Consensus 169 ~~~lVR~f~lgs-q~EgcvvDd~~g~Lyv~eEd~G--Iw~~da 208 (355)
T 3amr_A 169 SGKKVRAFKMNS-QTEGMAADDEYGRLYIAEEDEA--IWKFSA 208 (355)
T ss_dssp EEEEEEEEECSS-CEEEEEEETTTTEEEEEETTTE--EEEEEC
T ss_pred cceEEEEecCCC-CcceEEEcCCCCeEEEecccce--EEEEeC
Confidence 446677776543 333333321 123333 4433 665564
No 276
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.91 E-value=0.87 Score=40.54 Aligned_cols=118 Identities=7% Similarity=-0.133 Sum_probs=74.4
Q ss_pred ccCCCeEEEEEcCCCCE-EEEEeCCCcEEEEeCCCC----eEEEEEeCCCCCeEEEEEec-CCCEEEEEECCCcEEEEec
Q psy8430 159 GHRDGVWDVAVRPGQPV-LGSASADRTVRLWSTQTG----KCVLQYSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQA 232 (361)
Q Consensus 159 ~h~~~V~~l~~~~~~~~-l~s~s~d~~i~~wd~~~~----~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~lwd~ 232 (361)
.....+..++|++.+.. +.+-...+.|..+++... .....+.........+++.+ .++++++-...+.|.+.++
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~ 188 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 188 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeC
Confidence 34567889999986554 444455688998988652 22333333456778899998 4555556566788888887
Q ss_pred cccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC--CCcEEEeeCCC
Q psy8430 233 VINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW--DRVANLFDVET 302 (361)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--d~~v~iwd~~~ 302 (361)
.... ....+.........++++|.+.+|+.+.. .+.|...++..
T Consensus 189 ~g~~--------------------------~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 189 KGVK--------------------------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp TTCS--------------------------EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS
T ss_pred CCCc--------------------------eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC
Confidence 5331 11122223445788999997777766653 36788888763
No 277
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.80 E-value=0.94 Score=40.09 Aligned_cols=149 Identities=7% Similarity=-0.069 Sum_probs=84.4
Q ss_pred CCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEE-EEECC-CcEEEEeccccccc
Q psy8430 162 DGVWDVAVRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGD-KSVHIWQAVINWEC 238 (361)
Q Consensus 162 ~~V~~l~~~~~-~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~-s~~~d-~~i~lwd~~~~~~~ 238 (361)
.....+++++. +.++++-...+.|.+.++........+.........++++|.+..++ +-..+ +.|..+++...
T Consensus 159 ~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~--- 235 (386)
T 3v65_B 159 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS--- 235 (386)
T ss_dssp SCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---
T ss_pred CCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC---
Confidence 34567888874 44555556677888888865443333333446789999998665544 44444 66777766432
Q ss_pred cCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCCCeEEEEeecCCCCC
Q psy8430 239 LNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTGHDEEP 316 (361)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~h~~~v 316 (361)
....+ ...-.....++|+|++..|+.+. ..+.|..+|+........+...-...
T Consensus 236 ------------------------~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P 291 (386)
T 3v65_B 236 ------------------------GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHP 291 (386)
T ss_dssp ------------------------SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSE
T ss_pred ------------------------CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCc
Confidence 11222 22334678999998777776655 45678899876432222222222222
Q ss_pred eEEEEEcCCCccc--CCCeEEEE
Q psy8430 317 HILCVSSYYSKVS--CDLFQRIQ 337 (361)
Q Consensus 317 ~~~~~s~s~~~v~--~dg~i~iW 337 (361)
..+.+....++++ ..+.|..+
T Consensus 292 ~giav~~~~ly~td~~~~~V~~~ 314 (386)
T 3v65_B 292 FAITVFEDSLYWTDWHTKSINSA 314 (386)
T ss_dssp EEEEEETTEEEEEETTTTEEEEE
T ss_pred eEEEEECCEEEEeeCCCCeEEEE
Confidence 3333333222221 56777777
No 278
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.68 E-value=0.17 Score=48.42 Aligned_cols=116 Identities=16% Similarity=0.216 Sum_probs=73.4
Q ss_pred EEEEcC-CCCEEEEEeCCC-----------cEEEEeCCCCe--EEEEEe-CCCCCeEEEEEecCCCEEEEEEC-CCcEEE
Q psy8430 166 DVAVRP-GQPVLGSASADR-----------TVRLWSTQTGK--CVLQYS-GHSGSVNSVRFLPNKDLVLSASG-DKSVHI 229 (361)
Q Consensus 166 ~l~~~~-~~~~l~s~s~d~-----------~i~~wd~~~~~--~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~-d~~i~l 229 (361)
++++.+ ++.+++.|+.+. .+.+||..+++ .+..+. .+.....++++.+++.+++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556667 888888887653 58899988764 222332 23333445777889999999884 458999
Q ss_pred EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEe-CC-----CcEEEeeCCCC
Q psy8430 230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITAS-WD-----RVANLFDVETG 303 (361)
Q Consensus 230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d-----~~v~iwd~~~~ 303 (361)
||..+.. +. .+..+...... .++++.++|+.++.|+ .+ ..+.+||..+.
T Consensus 270 yd~~t~~---------------------W~---~~~~~~~~R~~-~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 270 YDSSSDS---------------------WI---PGPDMQVARGY-QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEGGGTE---------------------EE---ECCCCSSCCSS-CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred ecCcCCc---------------------ee---ECCCCCccccc-cceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 9987541 11 11111111111 2344567899999988 44 56899999876
Q ss_pred eEE
Q psy8430 304 TIL 306 (361)
Q Consensus 304 ~~~ 306 (361)
+..
T Consensus 325 ~W~ 327 (656)
T 1k3i_A 325 TWT 327 (656)
T ss_dssp EEE
T ss_pred cce
Confidence 543
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.67 E-value=1.8 Score=42.36 Aligned_cols=122 Identities=11% Similarity=-0.061 Sum_probs=75.4
Q ss_pred cCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCC----eEEEEEeCCCCCeEEEEEecCCC-EEEEEECCCcEEEEecc
Q psy8430 160 HRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG----KCVLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAV 233 (361)
Q Consensus 160 h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~----~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~lwd~~ 233 (361)
....+..|+|++... ++++-...+.|+.+++... .....+.........|++.+.+. ++++-...+.|.+.++.
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 345677899998544 5555556678888888642 22333333455677899988665 45555567889998875
Q ss_pred ccccccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEeCC--CcEEEeeCCCCeEEEEe
Q psy8430 234 INWECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWD--RVANLFDVETGTILQSL 309 (361)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d--~~v~iwd~~~~~~~~~~ 309 (361)
.. ....+ .........|+++|.+.+|+.+... +.|.+.++. |.....+
T Consensus 502 G~---------------------------~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d-G~~~~~l 552 (791)
T 3m0c_C 502 GV---------------------------KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSL 552 (791)
T ss_dssp SS---------------------------SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEE
T ss_pred CC---------------------------eEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC-CCceEEE
Confidence 33 11222 2334567899999987777666542 568888876 3333333
No 280
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.64 E-value=0.88 Score=38.63 Aligned_cols=84 Identities=12% Similarity=0.056 Sum_probs=56.4
Q ss_pred eEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCc
Q psy8430 194 KCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNV 273 (361)
Q Consensus 194 ~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (361)
+.+..+.. ......++|+++++++++-..++.|..||.... ....+ .....
T Consensus 23 ~~~~~~p~-~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~---------------------------~~~~~-~~~~~ 73 (306)
T 2p4o_A 23 KIITSFPV-NTFLENLASAPDGTIFVTNHEVGEIVSITPDGN---------------------------QQIHA-TVEGK 73 (306)
T ss_dssp EEEEEECT-TCCEEEEEECTTSCEEEEETTTTEEEEECTTCC---------------------------EEEEE-ECSSE
T ss_pred eEeEeCCC-CCCcceEEECCCCCEEEEeCCCCeEEEECCCCc---------------------------eEEEE-eCCCC
Confidence 44555543 356789999999987777768889999986532 11111 12346
Q ss_pred EEEEEEcCCCCEEEEEeCCC--cEEEeeCCCCeEE
Q psy8430 274 VIAADWLSDGEQVITASWDR--VANLFDVETGTIL 306 (361)
Q Consensus 274 v~~~~~~~~~~~l~s~~~d~--~v~iwd~~~~~~~ 306 (361)
...++++++|+++++..... .|..+|..+++..
T Consensus 74 p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 74 VSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred ceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 88899999999766654432 4777787777754
No 281
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.47 E-value=0.58 Score=38.78 Aligned_cols=113 Identities=10% Similarity=0.033 Sum_probs=68.2
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC---CCeEEEEEe-------CCCCCeEEEEEecCCCEEEE-EECCCcEEE
Q psy8430 161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQ---TGKCVLQYS-------GHSGSVNSVRFLPNKDLVLS-ASGDKSVHI 229 (361)
Q Consensus 161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~---~~~~~~~~~-------~h~~~v~~v~~~~~~~~l~s-~~~d~~i~l 229 (361)
......|+|+|.++.|.++.......+|.++ .+..+..+. .+...+..++++|....++. ...++.+..
T Consensus 120 N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~ 199 (255)
T 3qqz_A 120 NCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQE 199 (255)
T ss_dssp SSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred cCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEE
Confidence 4557899999988766666555445555543 111122221 13345789999996555444 445567888
Q ss_pred EeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCC---------CCcEEEEEEcCCCCEEEEEeCCCcEEEeeC
Q psy8430 230 WQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGH---------SNVVIAADWLSDGEQVITASWDRVANLFDV 300 (361)
Q Consensus 230 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 300 (361)
+|.... .+..+.-. ......++|.++|+ |+..+..+.++.|.-
T Consensus 200 ~d~~g~---------------------------~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 200 VTLVGE---------------------------VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRFTP 251 (255)
T ss_dssp ECTTCC---------------------------EEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEEEC
T ss_pred EcCCCC---------------------------EEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEEEe
Confidence 886532 22222111 23678899999997 555577787777754
Q ss_pred C
Q psy8430 301 E 301 (361)
Q Consensus 301 ~ 301 (361)
.
T Consensus 252 ~ 252 (255)
T 3qqz_A 252 Q 252 (255)
T ss_dssp -
T ss_pred c
Confidence 3
No 282
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.11 E-value=1.3 Score=43.31 Aligned_cols=120 Identities=10% Similarity=-0.015 Sum_probs=73.8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe--CCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccc
Q psy8430 161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC 238 (361)
Q Consensus 161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~ 238 (361)
...|.++..+++|.+.+ |+.++-+..+|..+++...... .....|.++...+++.+.+ |+. +-+..+|..++.-.
T Consensus 406 ~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~ 482 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVI 482 (781)
T ss_dssp CSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCC
T ss_pred CcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEE
Confidence 46799999988886555 6666678889987775432211 1346789998887776544 455 55888887654210
Q ss_pred cCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430 239 LNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI 305 (361)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 305 (361)
.. . ...........|.++...++|...+.. .++-+..||..+++.
T Consensus 483 ~~------------------~---~~~~~~~~~~~i~~i~~d~~g~lWigt-~~~Gl~~~~~~~~~~ 527 (781)
T 3v9f_A 483 HH------------------Y---DTSNSQLLENFVRSIAQDSEGRFWIGT-FGGGVGIYTPDMQLV 527 (781)
T ss_dssp EE------------------E---CTTTSSCSCSCEEEEEECTTCCEEEEE-SSSCEEEECTTCCEE
T ss_pred ec------------------c---cCcccccccceeEEEEEcCCCCEEEEE-cCCCEEEEeCCCCeE
Confidence 00 0 000000113578899999888766554 434477899876654
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.08 E-value=1.7 Score=38.60 Aligned_cols=116 Identities=10% Similarity=-0.066 Sum_probs=76.4
Q ss_pred cCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE-C-CCcEEEEeccccc
Q psy8430 160 HRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-G-DKSVHIWQAVINW 236 (361)
Q Consensus 160 h~~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~-d~~i~lwd~~~~~ 236 (361)
.......+++++ .+++.++-...+.|.+.+++.......+.........|+++|.+..|+-+. . .+.|...++...
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~- 235 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV- 235 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC-
T ss_pred CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC-
Confidence 345677899998 455566666678999999876544444444455688999999655544433 3 367777776432
Q ss_pred cccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEeeCCC
Q psy8430 237 ECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASW-DRVANLFDVET 302 (361)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~~ 302 (361)
....+ ...-.....+++++++..|+.+.. .+.|..+|+..
T Consensus 236 --------------------------~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 236 --------------------------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp --------------------------SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred --------------------------ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 11222 223357789999988887777654 56799999864
No 284
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.02 E-value=1.6 Score=37.91 Aligned_cols=172 Identities=13% Similarity=0.129 Sum_probs=102.4
Q ss_pred ceeeeEEeeccCCCeEEEEEcCC----CC---E-EEEEeC--CCcEEEEeCC--CCeEEEEEeC------CC-CCeEEEE
Q psy8430 150 SCYKIRSFSGHRDGVWDVAVRPG----QP---V-LGSASA--DRTVRLWSTQ--TGKCVLQYSG------HS-GSVNSVR 210 (361)
Q Consensus 150 ~~~~~~~l~~h~~~V~~l~~~~~----~~---~-l~s~s~--d~~i~~wd~~--~~~~~~~~~~------h~-~~v~~v~ 210 (361)
.++.++.+.. +.++.+..-|+ |. + +++.-. +++|.+|++. ++. +..+.. .. ..+..++
T Consensus 58 ~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlc 134 (355)
T 3amr_A 58 DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFT 134 (355)
T ss_dssp TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEE
T ss_pred CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEE
Confidence 5667777654 56777776663 22 2 333333 5799999773 333 444421 11 5566677
Q ss_pred E--ecC-CC-EEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEE
Q psy8430 211 F--LPN-KD-LVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQV 286 (361)
Q Consensus 211 ~--~~~-~~-~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 286 (361)
+ +|. +. +++....+|.+..|++..... .....+.++++.. .+.+..|...+...+|
T Consensus 135 ly~~~~~g~~yafV~~k~G~~~q~~l~~~~~-------------------g~~~~~lVR~f~l-gsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 135 LYHSQKTGKYYAMVTGKEGEFEQYELKADKN-------------------GYISGKKVRAFKM-NSQTEGMAADDEYGRL 194 (355)
T ss_dssp EEECTTTCCEEEEEECSSSEEEEEEEEECTT-------------------SCEEEEEEEEEEC-SSCEEEEEEETTTTEE
T ss_pred EEecCCCCcEEEEEECCCCeEEEEEEEeCCC-------------------CcccceEEEEecC-CCCcceEEEcCCCCeE
Confidence 7 664 43 577778889999998842100 0112234555543 4578899999989999
Q ss_pred EEEeCCCcEEEeeCC-----CCeEEEEee-cCC-CCCeE------------EEEEcCCCcccCCCeEEEEcCCCCCCCCc
Q psy8430 287 ITASWDRVANLFDVE-----TGTILQSLT-GHD-EEPHI------------LCVSSYYSKVSCDLFQRIQHLDCGTSENP 347 (361)
Q Consensus 287 ~s~~~d~~v~iwd~~-----~~~~~~~~~-~h~-~~v~~------------~~~s~s~~~v~~dg~i~iW~~d~~~~~~~ 347 (361)
+.+-.+.-|..+|.+ +++.+..+. ++- ..+.. +++|+- .+..+.+| |. +.+
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ-----G~~s~~Vy--dr---~~~ 264 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ-----GNSSYAIY--DR---QGK 264 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG-----GGTEEEEE--ES---STT
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC-----CCCEEEEE--EC---CCC
Confidence 999999777667754 355665542 111 12332 344443 57899999 76 323
Q ss_pred ceeeeee
Q psy8430 348 IHSVCVF 354 (361)
Q Consensus 348 ~~~v~~~ 354 (361)
...+..|
T Consensus 265 ~~~vg~f 271 (355)
T 3amr_A 265 NKYVADF 271 (355)
T ss_dssp CCEEEEE
T ss_pred CcEEEEE
Confidence 4445555
No 285
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.88 E-value=1.8 Score=42.17 Aligned_cols=114 Identities=11% Similarity=0.026 Sum_probs=73.8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC-----CCCeEEEEEecCCCEEEEEECCCcEEEEecccc
Q psy8430 161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH-----SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN 235 (361)
Q Consensus 161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h-----~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~ 235 (361)
...|.++..+++|.+.+. +. +-+..||..+++........ ...|.++...++|.+.+ |+.++-+..||..++
T Consensus 449 ~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 449 LLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQ 525 (781)
T ss_dssp CCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCC
T ss_pred CCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCC
Confidence 467999999988865554 44 56888998776543332222 46789999888887655 444344777876543
Q ss_pred ccccCCCCCCCCCCCCCCCCCceecccccEEEe----CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430 236 WECLNNDNDSDLDESKEPDESSITLRTPVKELL----GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI 305 (361)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 305 (361)
. ...+. .....|.++...++|...++. .+|.+..||..+++.
T Consensus 526 ~---------------------------~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~ 571 (781)
T 3v9f_A 526 L---------------------------VRKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFDY 571 (781)
T ss_dssp E---------------------------EEEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCCC
T ss_pred e---------------------------EEEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCcE
Confidence 1 11111 124578899998888766554 467658999887653
No 286
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=94.82 E-value=1.7 Score=37.35 Aligned_cols=165 Identities=8% Similarity=0.031 Sum_probs=93.2
Q ss_pred eeccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCeEEEEEeCC-------CCCeEEEEE---ecCCCEEEEEE---
Q psy8430 157 FSGHRDGVWDVAVRPGQPVLGSAS-ADRTVRLWSTQTGKCVLQYSGH-------SGSVNSVRF---LPNKDLVLSAS--- 222 (361)
Q Consensus 157 l~~h~~~V~~l~~~~~~~~l~s~s-~d~~i~~wd~~~~~~~~~~~~h-------~~~v~~v~~---~~~~~~l~s~~--- 222 (361)
+.....--.++.|++....|..++ ..++|..||...+......... ...+..|.| .|+++++++..
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 334445556789988555555554 7899999999766433332211 114579999 68877776543
Q ss_pred ----------CCCcEEEEecc---ccccccCCCCCCCCCCCCCCCCCceeccccc---EEEeC-CCCcEEEEEEcCCCCE
Q psy8430 223 ----------GDKSVHIWQAV---INWECLNNDNDSDLDESKEPDESSITLRTPV---KELLG-HSNVVIAADWLSDGEQ 285 (361)
Q Consensus 223 ----------~d~~i~lwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~v~~~~~~~~~~~ 285 (361)
.+..+..+|+. ++..+.. ....... ....+ -......++..++|+.
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~-----------------~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gna 150 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWS-----------------VNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNS 150 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEE-----------------EESHHHHHHHHHHHSSCCEEEEEEEECTTSCE
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEE-----------------ecCccccccccccccccccCCceeEECCCCCE
Confidence 25778899987 4432110 0000000 00001 1134788999999999
Q ss_pred EEEEeCC-CcEEEeeCCCCeEEEEeecCC------CCCeEEEEEcCCC--cc-cCCCeEEEEcCCC
Q psy8430 286 VITASWD-RVANLFDVETGTILQSLTGHD------EEPHILCVSSYYS--KV-SCDLFQRIQHLDC 341 (361)
Q Consensus 286 l~s~~~d-~~v~iwd~~~~~~~~~~~~h~------~~v~~~~~s~s~~--~v-~~dg~i~iW~~d~ 341 (361)
.++++.. +.|..++.. |+.+..+.... .....+++++... .| ..+|.+.-+ |+
T Consensus 151 YVt~s~~~~~I~rV~pd-G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~f--D~ 213 (334)
T 2p9w_A 151 YVAFALGMPAIARVSAD-GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAF--DV 213 (334)
T ss_dssp EEEEEESSCEEEEECTT-SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEE--EC
T ss_pred EEeCCCCCCeEEEEeCC-CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEE--cC
Confidence 9999888 887777765 33333332111 1123455554421 11 136777777 66
No 287
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.80 E-value=0.94 Score=43.29 Aligned_cols=93 Identities=6% Similarity=0.018 Sum_probs=57.9
Q ss_pred eeecCccceeeeEEeec-cCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCeEEEEEeCCCC-CeEEEEEecCCCEEE
Q psy8430 143 SFKTSLLSCYKIRSFSG-HRDGVWDVAVRPGQPVLGSASA-DRTVRLWSTQTGKCVLQYSGHSG-SVNSVRFLPNKDLVL 219 (361)
Q Consensus 143 ~~~~~~~~~~~~~~l~~-h~~~V~~l~~~~~~~~l~s~s~-d~~i~~wd~~~~~~~~~~~~h~~-~v~~v~~~~~~~~l~ 219 (361)
.+.........+..+.. +.....++++.+++.+++.||. +..+.+||..+.+-...-..+.. .-.+++..+++++++
T Consensus 223 ~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv 302 (656)
T 1k3i_A 223 SWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFT 302 (656)
T ss_dssp EECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEE
T ss_pred EEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEE
Confidence 34444455544444432 3333445778889999999984 46899999887643322111111 223455667899999
Q ss_pred EEE-CC-----CcEEEEecccc
Q psy8430 220 SAS-GD-----KSVHIWQAVIN 235 (361)
Q Consensus 220 s~~-~d-----~~i~lwd~~~~ 235 (361)
.|+ .+ ..+.+||+.+.
T Consensus 303 ~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 303 IGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp ECCCCCSSSCCCCEEEEETTTT
T ss_pred EeCcccCCcccccceEeCCCCC
Confidence 888 44 46899998764
No 288
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.78 E-value=1.6 Score=38.02 Aligned_cols=71 Identities=15% Similarity=0.220 Sum_probs=45.3
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE--EEEEe---CCCCCeEEEEEecC---CCEE-EEEECC-----C
Q psy8430 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYS---GHSGSVNSVRFLPN---KDLV-LSASGD-----K 225 (361)
Q Consensus 160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~--~~~~~---~h~~~v~~v~~~~~---~~~l-~s~~~d-----~ 225 (361)
.-..-+.++|.|+|.++++ ..++.|.+++ .+.. +..+. .-......|+|+|+ +..| ++-..+ .
T Consensus 29 ~l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 29 GLEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp CCSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 3455779999999985555 5669999998 4542 22111 12457889999998 4444 443332 5
Q ss_pred cEEEEecc
Q psy8430 226 SVHIWQAV 233 (361)
Q Consensus 226 ~i~lwd~~ 233 (361)
.|..|+..
T Consensus 106 ~v~r~~~~ 113 (352)
T 2ism_A 106 QVVRLRHL 113 (352)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 66667654
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.38 E-value=4.2 Score=39.77 Aligned_cols=116 Identities=10% Similarity=-0.068 Sum_probs=75.5
Q ss_pred cCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEE-EEEECC-CcEEEEeccccc
Q psy8430 160 HRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV-LSASGD-KSVHIWQAVINW 236 (361)
Q Consensus 160 h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~~~d-~~i~lwd~~~~~ 236 (361)
.......|++++.+. ++++-...+.|.+.++........+.........|+++|....| ++-..+ +.|...++...
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~- 547 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV- 547 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-
T ss_pred CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC-
Confidence 445567899998664 55555667899999987554333334445678999999975544 443333 67777776432
Q ss_pred cccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEeeCCC
Q psy8430 237 ECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASW-DRVANLFDVET 302 (361)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~~ 302 (361)
....+ ...-.....|++++.+..|+.+.. .+.|..+|+..
T Consensus 548 --------------------------~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 548 --------------------------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp --------------------------CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred --------------------------ceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 12222 223357889999987777777654 46788888864
No 290
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.26 E-value=2.1 Score=38.85 Aligned_cols=55 Identities=11% Similarity=0.153 Sum_probs=37.2
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEE--EEEeC------CCCCeEEEEEecC
Q psy8430 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV--LQYSG------HSGSVNSVRFLPN 214 (361)
Q Consensus 160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~--~~~~~------h~~~v~~v~~~~~ 214 (361)
.-...+.++|.|+|+++++-...+.|++++..++... ..+.. -......|+|+|+
T Consensus 25 ~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 25 NLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 3456789999999987777554457888886556432 22221 2356779999995
No 291
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.22 E-value=0.16 Score=40.93 Aligned_cols=112 Identities=10% Similarity=-0.058 Sum_probs=64.3
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEE------EEEe--CCCCCeEEEEEecCCCEEEEEECCCcEEEEecc
Q psy8430 162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV------LQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 233 (361)
Q Consensus 162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~------~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~ 233 (361)
..+.+++|+|+|.+.+. .+|.+.-.+..++... ..+- +-.. -.++.|.|+|.+.++ .||.|.-++..
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 36779999999986666 6676655555432110 1110 1111 478899999988877 56888777642
Q ss_pred ccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEee
Q psy8430 234 INWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299 (361)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd 299 (361)
+... ..........-.+--..+..+.+.|+|...+.. |+.++-+.
T Consensus 116 ~~~~-------------------~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~ 160 (236)
T 1tl2_A 116 QSDT-------------------DNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKAL 160 (236)
T ss_dssp CSTT-------------------CCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEEC
T ss_pred cCCC-------------------CceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecC
Confidence 2100 001111111112222467899999999766666 77765443
No 292
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=94.17 E-value=2.4 Score=36.19 Aligned_cols=154 Identities=10% Similarity=-0.086 Sum_probs=89.4
Q ss_pred CCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE-CC-CcEEEEeccccccc
Q psy8430 162 DGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-GD-KSVHIWQAVINWEC 238 (361)
Q Consensus 162 ~~V~~l~~~~~~-~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~d-~~i~lwd~~~~~~~ 238 (361)
.....+++++.+ ++.++-...+.|.+++.........+.........++++|.+..++.+. .. +.|...++...
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~--- 153 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV--- 153 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC---
Confidence 456789998744 4555556778999999875433333333446788999998655544443 33 67777766422
Q ss_pred cCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCCCeEEEEeec-C--C
Q psy8430 239 LNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTG-H--D 313 (361)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~-h--~ 313 (361)
....+ ...-.....++++|++..|+.+. ..+.|..+|+.. .....+.. . -
T Consensus 154 ------------------------~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~~~~ 208 (316)
T 1ijq_A 154 ------------------------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRL 208 (316)
T ss_dssp ------------------------CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTT
T ss_pred ------------------------CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEeecCCcc
Confidence 11122 12345678999999877776665 456899999873 33333321 1 1
Q ss_pred CCCeEEEEEcCCCccc--CCCeEEEEcCCCCCCC
Q psy8430 314 EEPHILCVSSYYSKVS--CDLFQRIQHLDCGTSE 345 (361)
Q Consensus 314 ~~v~~~~~s~s~~~v~--~dg~i~iW~~d~~~~~ 345 (361)
.....+.+..+.++++ ..+.|..+ |..+++
T Consensus 209 ~~P~giav~~~~ly~~d~~~~~V~~~--~~~~g~ 240 (316)
T 1ijq_A 209 AHPFSLAVFEDKVFWTDIINEAIFSA--NRLTGS 240 (316)
T ss_dssp SSEEEEEEETTEEEEEETTTTEEEEE--ETTTCC
T ss_pred CCcEEEEEECCEEEEEECCCCeEEEE--eCCCCc
Confidence 1122333333333321 56777777 654443
No 293
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.16 E-value=2.5 Score=36.32 Aligned_cols=151 Identities=9% Similarity=-0.036 Sum_probs=83.7
Q ss_pred ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeC--CCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccc
Q psy8430 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWST--QTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW 236 (361)
Q Consensus 159 ~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~--~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~ 236 (361)
++...+..+.+.+++.+++.+...+..+-+|- .+.+.+. ......+..+.+.+++..+ .++.+|.+.+++...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~ 236 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSE 236 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEE
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCC
Confidence 45667899999999887776654444444552 2333332 2456788999999887655 45567877776422111
Q ss_pred cccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec---C
Q psy8430 237 ECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG---H 312 (361)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~---h 312 (361)
. +..+..- ..+...+.++.+.+++..++++. ++.+ ++....|+.-..+.. .
T Consensus 237 t-----------------------W~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~ 291 (327)
T 2xbg_A 237 N-----------------------WGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKV 291 (327)
T ss_dssp E-----------------------ECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTS
T ss_pred e-----------------------eEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCC
Confidence 0 0011000 01223578888988777666654 6766 344444544333331 2
Q ss_pred CCCCeEEEEEcC--CCcccCCCeEEEE
Q psy8430 313 DEEPHILCVSSY--YSKVSCDLFQRIQ 337 (361)
Q Consensus 313 ~~~v~~~~~s~s--~~~v~~dg~i~iW 337 (361)
...+..+.+... ...++.+|.|.-+
T Consensus 292 ~~~~~~v~~~~~~~~~~~G~~G~i~~~ 318 (327)
T 2xbg_A 292 PSNFYKILFFSPDQGFILGQKGILLRY 318 (327)
T ss_dssp SSCCCEEEEEETTEEEEECSTTEEEEE
T ss_pred CCCeEEEEEECCCceEEEcCCceEEEE
Confidence 234455444322 2234578877666
No 294
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=93.93 E-value=2.2 Score=38.06 Aligned_cols=116 Identities=11% Similarity=0.102 Sum_probs=69.7
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC----CCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCC
Q psy8430 171 PGQPVLGSASADRTVRLWSTQTGKCVLQYSGH----SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSD 246 (361)
Q Consensus 171 ~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h----~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~ 246 (361)
.+|.-++.+- ++.||.-++..+..-+.+... -..|..+..+|+|++||..+ +..|.|-.+..+.....
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~------ 101 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVE------ 101 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCC------
T ss_pred cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCc------
Confidence 3454444432 467887777643222233321 23578899999999988774 66888887752211000
Q ss_pred CCCCCCCCCCceecccccEEEe------CCCCcEEEEEEcC---CCCEEEEEeCCCcEEEeeCCC
Q psy8430 247 LDESKEPDESSITLRTPVKELL------GHSNVVIAADWLS---DGEQVITASWDRVANLFDVET 302 (361)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~---~~~~l~s~~~d~~v~iwd~~~ 302 (361)
.......-..+.+. ....+|..+.||| .+..|++-..|+.|++||+..
T Consensus 102 --------~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 102 --------DVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp --------CHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred --------ccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 00000000111221 1357899999999 466899999999999999985
No 295
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=93.92 E-value=0.91 Score=40.93 Aligned_cols=140 Identities=9% Similarity=0.004 Sum_probs=76.6
Q ss_pred CCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEE-e-CCCCCeEEEEEecCCCEE-EEEECCCcEEEEecccccc
Q psy8430 162 DGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQY-S-GHSGSVNSVRFLPNKDLV-LSASGDKSVHIWQAVINWE 237 (361)
Q Consensus 162 ~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~-~-~h~~~v~~v~~~~~~~~l-~s~~~d~~i~lwd~~~~~~ 237 (361)
.....++++| +|.++++-..++.|+.+|..++.....+ . +....-..++|+|+++.| ++-...+.|..++......
T Consensus 228 ~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~ 307 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETG 307 (433)
T ss_dssp SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTC
T ss_pred CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCc
Confidence 3346688999 7777767667789999999877652332 2 122334579999999854 4555567899887642110
Q ss_pred ccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEE---------cCCCCEEEEEeCCCcEEEeeCCCCeEEEE
Q psy8430 238 CLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADW---------LSDGEQVITASWDRVANLFDVETGTILQS 308 (361)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---------~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 308 (361)
...... .... .......... ......-.....+++ .++|.++++-...+.|+.++. +|. +.+
T Consensus 308 ~~~~~~--~~ag--~~g~~g~~dg---~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~-v~t 378 (433)
T 4hw6_A 308 KLAVPY--IVCG--QHSSPGWVDG---MGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR-VTT 378 (433)
T ss_dssp CBCCCE--EEEE--CTTCCCCBCE---EGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE-EEE
T ss_pred ccCcEE--EEEe--cCCCCccCCC---cccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC-EEE
Confidence 000000 0000 0000000000 000011234667888 677777777667788999985 564 444
Q ss_pred ee
Q psy8430 309 LT 310 (361)
Q Consensus 309 ~~ 310 (361)
+.
T Consensus 379 ~~ 380 (433)
T 4hw6_A 379 YA 380 (433)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 296
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.79 E-value=0.57 Score=45.21 Aligned_cols=143 Identities=10% Similarity=-0.060 Sum_probs=79.8
Q ss_pred eEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCC-EEEEEECC-CcEEEEeccccccccC
Q psy8430 164 VWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-LVLSASGD-KSVHIWQAVINWECLN 240 (361)
Q Consensus 164 V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d-~~i~lwd~~~~~~~~~ 240 (361)
...|++++ .+.++++-...+.|.++++........+.........|+++|.+. ++++-... +.|..+++...
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~----- 529 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV----- 529 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-----
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-----
Confidence 45678875 444555555678899999865443333332334567888988544 44443222 56666655321
Q ss_pred CCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEE-eCCCcEEEeeCCCCeEEEEee------cC
Q psy8430 241 NDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVETGTILQSLT------GH 312 (361)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~~~~~~~~~~------~h 312 (361)
....+ ...-.....|+|+|++..|+.+ ...+.|.++|+... ....+. .|
T Consensus 530 ----------------------~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~-~~~~~~~~~~~~~~ 586 (699)
T 1n7d_A 530 ----------------------DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAH 586 (699)
T ss_dssp ----------------------CCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS-CCEEECCCSSSCSS
T ss_pred ----------------------CeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC-ceEEEEecCCcCCC
Confidence 11111 1122355678999876655554 45677999998643 222222 12
Q ss_pred CCCCeE----EEEEcCCCcccCCCeEEEEcCCC
Q psy8430 313 DEEPHI----LCVSSYYSKVSCDLFQRIQHLDC 341 (361)
Q Consensus 313 ~~~v~~----~~~s~s~~~v~~dg~i~iW~~d~ 341 (361)
...+.. ++++.. ..+.|..+ |.
T Consensus 587 P~glavd~~~lywtd~-----~~~~V~~~--d~ 612 (699)
T 1n7d_A 587 PFSLAVFEDKVFWTDI-----INEAIFSA--NR 612 (699)
T ss_dssp CCCCEEETTEEEEECS-----TTTCEEEE--ET
T ss_pred ceEeEEECCEEEEEeC-----CCCeEEEE--Ec
Confidence 222221 555555 67788888 55
No 297
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=93.44 E-value=0.95 Score=45.34 Aligned_cols=39 Identities=21% Similarity=0.327 Sum_probs=34.5
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430 272 NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 310 (361)
Q Consensus 272 ~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 310 (361)
..+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 357778888899999999999999999999999998764
No 298
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=93.17 E-value=3.7 Score=35.14 Aligned_cols=154 Identities=8% Similarity=-0.087 Sum_probs=88.2
Q ss_pred CCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE-C-CCcEEEEeccccccc
Q psy8430 162 DGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-G-DKSVHIWQAVINWEC 238 (361)
Q Consensus 162 ~~V~~l~~~~-~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~-d~~i~lwd~~~~~~~ 238 (361)
.....+++++ .+.++++-...+.|.++++........+.........+++.|.+..++.+. . .+.|...++...
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~--- 155 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS--- 155 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC---
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC---
Confidence 4566789987 455556656678999999865433333334456788999998655544444 2 467777765422
Q ss_pred cCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCCCeEEEEeec-CCCC
Q psy8430 239 LNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVETGTILQSLTG-HDEE 315 (361)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~-h~~~ 315 (361)
....+ ...-.....++|+|++..|+.+. ..+.|..+|+.. .....+.. .-..
T Consensus 156 ------------------------~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~ 210 (318)
T 3sov_A 156 ------------------------SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG-TNRQAVVKGSLPH 210 (318)
T ss_dssp ------------------------SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECSCCSC
T ss_pred ------------------------CeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC-CceEEEecCCCCC
Confidence 11122 12234678999999777776665 457799999863 32233321 2222
Q ss_pred CeEEEEEcCCCccc--CCCeEEEEcCCCCCCC
Q psy8430 316 PHILCVSSYYSKVS--CDLFQRIQHLDCGTSE 345 (361)
Q Consensus 316 v~~~~~s~s~~~v~--~dg~i~iW~~d~~~~~ 345 (361)
...+.+....++++ ..+.|..+ |..+++
T Consensus 211 P~glav~~~~lywtd~~~~~V~~~--~~~~G~ 240 (318)
T 3sov_A 211 PFALTLFEDILYWTDWSTHSILAC--NKYTGE 240 (318)
T ss_dssp EEEEEEETTEEEEEETTTTEEEEE--ETTTCC
T ss_pred ceEEEEeCCEEEEEecCCCeEEEE--ECCCCC
Confidence 22222222222221 66777777 654443
No 299
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=92.64 E-value=4 Score=37.38 Aligned_cols=115 Identities=10% Similarity=0.028 Sum_probs=68.0
Q ss_pred CeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCeEEEEEeCC---CCCeEEEEE-------ecCCCEEEEEECCC-c---
Q psy8430 163 GVWDVAVRPG--QPVLGSASADRTVRLWSTQTGKCVLQYSGH---SGSVNSVRF-------LPNKDLVLSASGDK-S--- 226 (361)
Q Consensus 163 ~V~~l~~~~~--~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h---~~~v~~v~~-------~~~~~~l~s~~~d~-~--- 226 (361)
....|+|+|. ++++++-...+.|++.|...+........- ......|+| ++++..++.+...+ .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 3568999983 445555555577999998877654433321 235899999 99999666665543 2
Q ss_pred ---EEEEeccccccccCCCCCCCCCCCCCCCCCceec---ccccEEEeCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEee
Q psy8430 227 ---VHIWQAVINWECLNNDNDSDLDESKEPDESSITL---RTPVKELLGHSNVVIAADWLSD-GEQVITASWDRVANLFD 299 (361)
Q Consensus 227 ---i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd 299 (361)
|.+++...... +.. ...+..+ .....++++|+ +.++++-..++.|..+|
T Consensus 220 ~~~V~~i~r~~~G~--------------------~~~~~~~~~v~~~----~~p~giavdp~~g~LYvtd~~~g~V~r~d 275 (496)
T 3kya_A 220 SPSVYIIKRNADGT--------------------FDDRSDIQLIAAY----KQCNGATIHPINGELYFNSYEKGQVFRLD 275 (496)
T ss_dssp EEEEEEEECCTTSC--------------------CSTTSCEEEEEEE----SCCCCEEECTTTCCEEEEETTTTEEEEEC
T ss_pred CceEEEEecCCCCc--------------------eeecccceeeccC----CCceEEEEcCCCCeEEEEECCCCEEEEEe
Confidence 55554322000 000 0111121 23456788995 44455566778899999
Q ss_pred CC
Q psy8430 300 VE 301 (361)
Q Consensus 300 ~~ 301 (361)
+.
T Consensus 276 ~~ 277 (496)
T 3kya_A 276 LV 277 (496)
T ss_dssp HH
T ss_pred cc
Confidence 87
No 300
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=92.50 E-value=2.8 Score=36.51 Aligned_cols=72 Identities=19% Similarity=0.147 Sum_probs=44.7
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCe-EEEEEe---CCCCCeEEEEEecC----CCEEEEEEC---C----
Q psy8430 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK-CVLQYS---GHSGSVNSVRFLPN----KDLVLSASG---D---- 224 (361)
Q Consensus 160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~-~~~~~~---~h~~~v~~v~~~~~----~~~l~s~~~---d---- 224 (361)
.-...+.++|.|+|.+++ +..++.|++++ ..++ .+..+. .-......|+|+|+ +.+.++-+. +
T Consensus 27 ~l~~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 27 DLEVPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp SCSCEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 345678999999997555 45669999997 3554 222211 12356889999997 444444332 3
Q ss_pred CcEEEEecc
Q psy8430 225 KSVHIWQAV 233 (361)
Q Consensus 225 ~~i~lwd~~ 233 (361)
..|..|+..
T Consensus 105 ~~v~r~~~~ 113 (354)
T 3a9g_A 105 NRVIRGRLD 113 (354)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEEC
Confidence 456666653
No 301
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.45 E-value=5 Score=34.83 Aligned_cols=80 Identities=16% Similarity=0.249 Sum_probs=51.5
Q ss_pred eeEEeeccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEE--EEE----eCCCCCeEEEEEecC----CCEEEEEE
Q psy8430 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV--LQY----SGHSGSVNSVRFLPN----KDLVLSAS 222 (361)
Q Consensus 153 ~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~--~~~----~~h~~~v~~v~~~~~----~~~l~s~~ 222 (361)
.+..+...-..-+.++|.|+|.++++--..|.|++++...++.. ..+ ..-......|+|+|+ +.+.++-+
T Consensus 23 ~~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 23 VLRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred eeEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 34445556677899999999988777766899999987666432 212 123457889999995 44444333
Q ss_pred --CCCcEEEEec
Q psy8430 223 --GDKSVHIWQA 232 (361)
Q Consensus 223 --~d~~i~lwd~ 232 (361)
.+..|.-|.+
T Consensus 103 ~~~~~~v~R~~~ 114 (347)
T 3das_A 103 SASDNRIVRMLY 114 (347)
T ss_dssp CSSSEEEEEEEB
T ss_pred cCCCCEEEEEEe
Confidence 3344444444
No 302
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.97 E-value=9.1 Score=38.32 Aligned_cols=36 Identities=17% Similarity=0.161 Sum_probs=30.8
Q ss_pred CeEEEEEecCCCEEEEEECCCcEEEEeccccccccC
Q psy8430 205 SVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLN 240 (361)
Q Consensus 205 ~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~ 240 (361)
.+.+++..++..++++.+.|+++|+|++.++..+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 567778888888999999999999999999876554
No 303
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=91.79 E-value=6.1 Score=34.41 Aligned_cols=135 Identities=15% Similarity=0.213 Sum_probs=81.2
Q ss_pred cceeeeEEeeccC-CCeEEEEEcCCCCEEEEEeC-----------------CCcEEEEeCCCCeEEEEEeCCCCCeEEEE
Q psy8430 149 LSCYKIRSFSGHR-DGVWDVAVRPGQPVLGSASA-----------------DRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210 (361)
Q Consensus 149 ~~~~~~~~l~~h~-~~V~~l~~~~~~~~l~s~s~-----------------d~~i~~wd~~~~~~~~~~~~h~~~v~~v~ 210 (361)
.....+.++.+.. ...+++.+.++|.+.++... .|.|.-+|. ++...... .-...+.++
T Consensus 151 ~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~-~l~~pNGia 227 (355)
T 3sre_A 151 KSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAE-GFDFANGIN 227 (355)
T ss_dssp TEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEE-EESSEEEEE
T ss_pred CEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeec-CCcccCcce
Confidence 4445666666543 45789999999987777541 233444443 43322222 345678999
Q ss_pred EecCCCEEEEEE-CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcC-CCCEEEE
Q psy8430 211 FLPNKDLVLSAS-GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLS-DGEQVIT 288 (361)
Q Consensus 211 ~~~~~~~l~s~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s 288 (361)
|+|+++.++.+. ..+.|..|++..... .. ....+ ...+....+++.+ +|.+.++
T Consensus 228 ~spDg~~lYvadt~~~~I~~~~~~~~g~--------------------l~---~~~~~-~~~g~PDGi~vD~e~G~lwva 283 (355)
T 3sre_A 228 ISPDGKYVYIAELLAHKIHVYEKHANWT--------------------LT---PLRVL-SFDTLVDNISVDPVTGDLWVG 283 (355)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEECTTSC--------------------EE---EEEEE-ECSSEEEEEEECTTTCCEEEE
T ss_pred ECCCCCEEEEEeCCCCeEEEEEECCCCc--------------------Ee---cCEEE-eCCCCCceEEEeCCCCcEEEE
Confidence 999998776654 567899998753211 00 11122 2246678899999 5998887
Q ss_pred EeCC-CcEEEeeCC--CCeEEEEee
Q psy8430 289 ASWD-RVANLFDVE--TGTILQSLT 310 (361)
Q Consensus 289 ~~~d-~~v~iwd~~--~~~~~~~~~ 310 (361)
+..+ +.|..||.. .+..+.++.
T Consensus 284 ~~~~g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 284 CHPNGMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp EESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred ecCCceEEEEECCCCCCCCEEEEEE
Confidence 7654 345555544 244555554
No 304
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=91.29 E-value=0.38 Score=41.72 Aligned_cols=116 Identities=13% Similarity=0.136 Sum_probs=68.8
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEEEEeCC-CCCeEEEEEe--cCCCEEEEE--ECCCcEEEEeccccccccCCCCCCCCC
Q psy8430 174 PVLGSASADRTVRLWSTQTGKCVLQYSGH-SGSVNSVRFL--PNKDLVLSA--SGDKSVHIWQAVINWECLNNDNDSDLD 248 (361)
Q Consensus 174 ~~l~s~s~d~~i~~wd~~~~~~~~~~~~h-~~~v~~v~~~--~~~~~l~s~--~~d~~i~lwd~~~~~~~~~~~~~~~~~ 248 (361)
..++.++.||.|...|..+|+.+-.+... ..++....-. +.+..++.+ ..||.+..++..++...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~---------- 80 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK---------- 80 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE----------
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE----------
Confidence 37889999999999999999988887643 1222221100 012233333 57899988887655211
Q ss_pred CCCCCCCCceecccccEEEeCCCCcEEE---EEE-c----CCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430 249 ESKEPDESSITLRTPVKELLGHSNVVIA---ADW-L----SDGEQVITASWDRVANLFDVETGTILQSLTG 311 (361)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~-~----~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 311 (361)
....+..+. ...++.. ..+ . ..+..+++|+.+|.+...|+++|+.+..+..
T Consensus 81 -----------~~~~~~~lv-~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 81 -----------LPLSIRQLV-STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp -----------EEEEHHHHH-TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred -----------eeeccccce-eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 000000111 1112221 000 0 1456889999999999999999999887753
No 305
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=91.20 E-value=10 Score=35.85 Aligned_cols=115 Identities=7% Similarity=-0.075 Sum_probs=67.8
Q ss_pred cCCCeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCeE-EEEEeCCCCCeEEEEEecCCC-EEEEEECCCcEEEEeccccc
Q psy8430 160 HRDGVWDVAVRPGQPVLGSA-SADRTVRLWSTQTGKC-VLQYSGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINW 236 (361)
Q Consensus 160 h~~~V~~l~~~~~~~~l~s~-s~d~~i~~wd~~~~~~-~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~lwd~~~~~ 236 (361)
.-+....++|++.+..|+-+ ...+.|..+++..... ...+..--.....+++.+.+. ++++-...+.|.+.++....
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~ 117 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL 117 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC
Confidence 34557799999966655544 4467888888865432 223333336789999998555 45555567889999876431
Q ss_pred cccCCCCCCCCCCCCCCCCCceecccccEEEe-CCCCcEEEEEEcCCCCEEEEEeC--CCcEEEeeCC
Q psy8430 237 ECLNNDNDSDLDESKEPDESSITLRTPVKELL-GHSNVVIAADWLSDGEQVITASW--DRVANLFDVE 301 (361)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~--d~~v~iwd~~ 301 (361)
...+. ..-.....++++|.+.+|+.+.. .+.|...++.
T Consensus 118 ---------------------------~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d 158 (619)
T 3s94_A 118 ---------------------------RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD 158 (619)
T ss_dssp ---------------------------CEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred ---------------------------EEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC
Confidence 11221 23344567778886666655553 2455555554
No 306
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=90.63 E-value=4.6 Score=36.98 Aligned_cols=122 Identities=10% Similarity=-0.027 Sum_probs=67.9
Q ss_pred CeEEEEE-------cCCCCEEEEEeCCC-------cEEEEeCCC-CeEE-----EEEeCCCCCeEEEEEec-CCCEEEEE
Q psy8430 163 GVWDVAV-------RPGQPVLGSASADR-------TVRLWSTQT-GKCV-----LQYSGHSGSVNSVRFLP-NKDLVLSA 221 (361)
Q Consensus 163 ~V~~l~~-------~~~~~~l~s~s~d~-------~i~~wd~~~-~~~~-----~~~~~h~~~v~~v~~~~-~~~~l~s~ 221 (361)
....++| +++|..|+.+...+ .|.+++... +... ..+.. -.....++++| ++.++++-
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd 265 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNS 265 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEE
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEE
Confidence 5789999 99999666665543 255665433 1111 12211 12345778899 45556666
Q ss_pred ECCCcEEEEecc-------ccccccCCCCCCCCCCCCCCCCCceec--ccccEEEeCCCCcEEEEEEcCCCCEEEEE-eC
Q psy8430 222 SGDKSVHIWQAV-------INWECLNNDNDSDLDESKEPDESSITL--RTPVKELLGHSNVVIAADWLSDGEQVITA-SW 291 (361)
Q Consensus 222 ~~d~~i~lwd~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~ 291 (361)
..++.|..+|+. ++... .... .... ...+.. .+.....+.++|+|+|++|+.+ +.
T Consensus 266 ~~~g~V~r~d~~~~~~~~~tg~~~-tp~~-------------~~~~g~~~~l~~-~~~~~~p~~ia~~p~G~~lYvaD~~ 330 (496)
T 3kya_A 266 YEKGQVFRLDLVDYFKTIKNGGSW-DPIV-------------KNNPNTFKQLFT-IADPSWEFQIFIHPTGKYAYFGVIN 330 (496)
T ss_dssp TTTTEEEEECHHHHHHHHHTTCCC-CCBG-------------GGCTTTEEEEEE-CSSSSCCEEEEECTTSSEEEEEETT
T ss_pred CCCCEEEEEecccccccccCceee-cccc-------------cccccccceeEe-cCCCCCceEEEEcCCCCEEEEEeCC
Confidence 678889999986 23110 0000 0000 001111 1234456889999999965555 45
Q ss_pred CCcEEEeeC
Q psy8430 292 DRVANLFDV 300 (361)
Q Consensus 292 d~~v~iwd~ 300 (361)
.+.|+.+|.
T Consensus 331 ~h~I~kid~ 339 (496)
T 3kya_A 331 NHYFMRSDY 339 (496)
T ss_dssp TTEEEEEEE
T ss_pred CCEEEEEec
Confidence 677888554
No 307
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=90.62 E-value=3.3 Score=36.02 Aligned_cols=53 Identities=19% Similarity=0.273 Sum_probs=34.6
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe-------CCCCCeEEEEEecC
Q psy8430 161 RDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS-------GHSGSVNSVRFLPN 214 (361)
Q Consensus 161 ~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-------~h~~~v~~v~~~~~ 214 (361)
-...+.++|.|+|+.|+.+...|.|++++.. +.....+. ........|+|+|+
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pd 76 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPD 76 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTT
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCC
Confidence 3457899999999834445567999999853 43211111 12346789999995
No 308
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.61 E-value=4.2 Score=37.72 Aligned_cols=153 Identities=13% Similarity=0.025 Sum_probs=91.2
Q ss_pred CeEEEEEcCCCCEEEEEeC-CCcEEEEeCCC------Ce-------EEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430 163 GVWDVAVRPGQPVLGSASA-DRTVRLWSTQT------GK-------CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH 228 (361)
Q Consensus 163 ~V~~l~~~~~~~~l~s~s~-d~~i~~wd~~~------~~-------~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~ 228 (361)
....+.++|||.+++.++. +.++.++|+.. ++ ...... -.-.....+|.++|....|.--|..|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEE
Confidence 3456889999997777654 78999999873 11 122233 456678899999995555666899999
Q ss_pred EEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEE-----EEcCCCCEEEEEe---CCCcE-----
Q psy8430 229 IWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAA-----DWLSDGEQVITAS---WDRVA----- 295 (361)
Q Consensus 229 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-----~~~~~~~~l~s~~---~d~~v----- 295 (361)
-|++......-. .......+..+..|-.+-.-. .-.|+|+||++.. .|+.+
T Consensus 403 kWni~~a~~~~~----------------g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl 466 (638)
T 3sbq_A 403 KWNMEEAVRAYK----------------GEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPL 466 (638)
T ss_dssp EEEHHHHHHHHT----------------TCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSS
T ss_pred EEeccHHHHHhc----------------CccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCC
Confidence 999864311000 000112334444443332211 1256899998875 35444
Q ss_pred -----EEeeCCC--CeEEEEeecCCCCCeEEEEEcCCCcccCCCeEEEE
Q psy8430 296 -----NLFDVET--GTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQ 337 (361)
Q Consensus 296 -----~iwd~~~--~~~~~~~~~h~~~v~~~~~s~s~~~v~~dg~i~iW 337 (361)
.+.|+.- .+.+.-......+-.++++-.+ .=....+|
T Consensus 467 ~pen~QlidIsGdkM~lv~D~P~~~EPHda~~v~~~-----~i~p~~vy 510 (638)
T 3sbq_A 467 HPENDQLIDISGDEMKLVHDGPTFAEPHDCIMARRD-----QIKTKKIW 510 (638)
T ss_dssp CCEEEEEEECSSSSCEEEEEEEESSCCCCEEEEEGG-----GCCCCSSC
T ss_pred CCCcceeEecCCCceEEEecCCCCCCCcceEEecHH-----HcCCccee
Confidence 6778752 3444444445566666777776 33345567
No 309
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=90.48 E-value=7.6 Score=33.13 Aligned_cols=125 Identities=10% Similarity=-0.049 Sum_probs=76.7
Q ss_pred ccCCCeEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEE-ECCCcEEEEecccc
Q psy8430 159 GHRDGVWDVAVRPGQPVLGSAS--ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA-SGDKSVHIWQAVIN 235 (361)
Q Consensus 159 ~h~~~V~~l~~~~~~~~l~s~s--~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~-~~d~~i~lwd~~~~ 235 (361)
........++++|.+..|+-+. ..+.|...++............-...+.++|+|++..|..+ +..+.|..+|+...
T Consensus 119 ~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 119 QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 198 (318)
T ss_dssp SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC
Confidence 3445678999998655555554 25778888875332222222334567899999966655544 55678999887532
Q ss_pred ccccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430 236 WECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG 311 (361)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 311 (361)
....+ .+......++++. .+..+++-...+.|..+|..+|+....+..
T Consensus 199 ---------------------------~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 199 ---------------------------NRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKYTGEGLREIHS 247 (318)
T ss_dssp ---------------------------SCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred ---------------------------ceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCceEEEeC
Confidence 11111 2234456677775 334445555567899999888876666654
No 310
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=90.36 E-value=12 Score=35.36 Aligned_cols=155 Identities=14% Similarity=0.026 Sum_probs=91.7
Q ss_pred CCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEE-eCCCCCeEEEEEec-CCCEEEEEECCC--cEEEEecccc
Q psy8430 161 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFLP-NKDLVLSASGDK--SVHIWQAVIN 235 (361)
Q Consensus 161 ~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~-~~h~~~v~~v~~~~-~~~~l~s~~~d~--~i~lwd~~~~ 235 (361)
...+..++++..+. +..+-+..+.|.+.++. |+....+ .........|+++| .|.++++-.... .|...++...
T Consensus 388 ~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~ 466 (628)
T 4a0p_A 388 EIQPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGT 466 (628)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSC
T ss_pred cCCcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCC
Confidence 34678999999765 55566677889999985 5444343 33456789999999 666666654333 4444444311
Q ss_pred ccccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEeeCCCCeEEEEee-cC
Q psy8430 236 WECLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITASW-DRVANLFDVETGTILQSLT-GH 312 (361)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~~~~~~~~~~-~h 312 (361)
....+ ...-.....+++++.+..|+.+.. .+.|...|+. |.....+. ..
T Consensus 467 ---------------------------~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~d-G~~r~~~~~~~ 518 (628)
T 4a0p_A 467 ---------------------------EREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLS-GANRIVLEDSN 518 (628)
T ss_dssp ---------------------------SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEECSS
T ss_pred ---------------------------CcEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCC-CCceEEEEcCC
Confidence 11222 223446789999998777777655 5778889985 44444443 22
Q ss_pred CCCCeEEEEEcCCCccc--CCCeEEEEcCCCCCCCC
Q psy8430 313 DEEPHILCVSSYYSKVS--CDLFQRIQHLDCGTSEN 346 (361)
Q Consensus 313 ~~~v~~~~~s~s~~~v~--~dg~i~iW~~d~~~~~~ 346 (361)
-.....+.+..+.++++ ..+.|... |..+++.
T Consensus 519 ~~~P~glav~~~~ly~tD~~~~~i~~~--~k~~G~~ 552 (628)
T 4a0p_A 519 ILQPVGLTVFENWLYWIDKQQQMIEKI--DMTGREG 552 (628)
T ss_dssp CSCEEEEEEETTEEEEEETTTTEEEEE--ETTSSSC
T ss_pred CCCcEEEEEECCEEEEEECCCCeEEEE--ECcCCCC
Confidence 22233444444434432 44555555 6655443
No 311
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=89.82 E-value=9 Score=32.99 Aligned_cols=148 Identities=16% Similarity=0.137 Sum_probs=87.9
Q ss_pred eeeeEEeeccC----CCeEEEEEcCCCCEEEEEeC-------CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEec--C-CC
Q psy8430 151 CYKIRSFSGHR----DGVWDVAVRPGQPVLGSASA-------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP--N-KD 216 (361)
Q Consensus 151 ~~~~~~l~~h~----~~V~~l~~~~~~~~l~s~s~-------d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~--~-~~ 216 (361)
..+.+-+.-|. ..|..-..+++.++++..|- .|.+.+|..+.+. .+.+.||...-..+...- . .+
T Consensus 137 s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~ 215 (365)
T 2xzh_A 137 SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEEST 215 (365)
T ss_dssp CCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEEECCTTCSSCEE
T ss_pred CCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeeeeeEEEecCCCCCCce
Confidence 35555555543 44666667888886665442 3678899986543 456777755443332211 1 11
Q ss_pred EEEEEEC---CCcEEEEeccccccccCCCCCCCCCCCCCCCCCceeccc-ccEEEe---CCCCcEEEEEEcCCCCEEEEE
Q psy8430 217 LVLSASG---DKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRT-PVKELL---GHSNVVIAADWLSDGEQVITA 289 (361)
Q Consensus 217 ~l~s~~~---d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~v~~~~~~~~~~~l~s~ 289 (361)
+|+-+.. .+.+++-++.....- ...... .+..+. .-.+...++..++....++.-
T Consensus 216 lf~fa~r~~~g~kLhIiEi~~~~~~------------------~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyvi 277 (365)
T 2xzh_A 216 LFCFAVRGQAGGKLHIIEVGTPPTG------------------NQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLI 277 (365)
T ss_dssp EEEEEEEETTEEEEEEEECSSCCTT------------------CCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEE
T ss_pred EEEEEEecCCCcEEEEEEcCCCCCC------------------CCCcccccceeeCCccccCCceEEEEecccCCEEEEE
Confidence 3333332 258888887432000 000000 111111 224567788999999999999
Q ss_pred eCCCcEEEeeCCCCeEEEEeecCCCCCe
Q psy8430 290 SWDRVANLFDVETGTILQSLTGHDEEPH 317 (361)
Q Consensus 290 ~~d~~v~iwd~~~~~~~~~~~~h~~~v~ 317 (361)
+.-|.+++||++||.++..-.-....|.
T Consensus 278 TK~G~ihlyDleTgt~i~~nrIS~d~iF 305 (365)
T 2xzh_A 278 TKYGYIHLYDLETGTCIYMNRISGETIF 305 (365)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred eCCcEEEEEEcccCcEEEEeccCCCceE
Confidence 9999999999999999887765555553
No 312
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=89.67 E-value=8.1 Score=32.28 Aligned_cols=24 Identities=13% Similarity=0.213 Sum_probs=17.3
Q ss_pred CCCEEEEEeCC-----CcEEEeeCCCCeE
Q psy8430 282 DGEQVITASWD-----RVANLFDVETGTI 305 (361)
Q Consensus 282 ~~~~l~s~~~d-----~~v~iwd~~~~~~ 305 (361)
++..++.|+.+ ..+.+||+.+.+-
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 232 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAW 232 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCE
Confidence 56777777654 3688999987654
No 313
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=89.10 E-value=0.83 Score=44.06 Aligned_cols=121 Identities=11% Similarity=-0.019 Sum_probs=69.8
Q ss_pred CCeEEEEEcCCCCEEEEEe-CC-CcEEEEeCCCCeEEEEE-eCCCCCeEEEEEecCCC-EEEEEECCCcEEEEecccccc
Q psy8430 162 DGVWDVAVRPGQPVLGSAS-AD-RTVRLWSTQTGKCVLQY-SGHSGSVNSVRFLPNKD-LVLSASGDKSVHIWQAVINWE 237 (361)
Q Consensus 162 ~~V~~l~~~~~~~~l~s~s-~d-~~i~~wd~~~~~~~~~~-~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~lwd~~~~~~ 237 (361)
.....|+++|.+.+|+.+. .. +.|..+++.... ...+ ...-...+.|+|+|++. ++++-+..+.|..+++....
T Consensus 496 ~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~- 573 (699)
T 1n7d_A 496 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN- 573 (699)
T ss_dssp CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-
T ss_pred CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-
Confidence 4467788998655444433 22 678777765332 2222 22234567899998655 45555566789999875321
Q ss_pred ccCCCCCCCCCCCCCCCCCceecccccEEEe---CCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430 238 CLNNDNDSDLDESKEPDESSITLRTPVKELL---GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG 311 (361)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 311 (361)
...+. .......+|++..+ ..+++....+.|..+|..+|+.+..+..
T Consensus 574 --------------------------~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 574 --------------------------RKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp --------------------------CEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCT
T ss_pred --------------------------eEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeec
Confidence 11111 11123344555433 3444445567899999888888777753
No 314
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=88.71 E-value=6.7 Score=32.76 Aligned_cols=89 Identities=12% Similarity=0.165 Sum_probs=44.8
Q ss_pred eeecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCeEEEE--EeCCCCCeEEEEEecCC
Q psy8430 143 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD-----RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNK 215 (361)
Q Consensus 143 ~~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~~ 215 (361)
.+.....+...+..+......-.++.+ ++.+++.|+.+ ..+.+||+.+.+-... +......-..+.+ ++
T Consensus 132 ~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~ 207 (301)
T 2vpj_A 132 RYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--ND 207 (301)
T ss_dssp EEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT
T ss_pred EEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CC
Confidence 344444455544444322222222223 56677777654 4588899877643322 1111111122222 56
Q ss_pred CEEEEEECC-----CcEEEEecccc
Q psy8430 216 DLVLSASGD-----KSVHIWQAVIN 235 (361)
Q Consensus 216 ~~l~s~~~d-----~~i~lwd~~~~ 235 (361)
.+++.|+.+ ..+.+||+.+.
T Consensus 208 ~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 208 HIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp EEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EEEEEeCCCCCcccceEEEEeCCCC
Confidence 677777654 35788887654
No 315
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=88.02 E-value=26 Score=35.94 Aligned_cols=132 Identities=14% Similarity=0.073 Sum_probs=74.8
Q ss_pred cEEEEeCCCCeEEEEEeCC-CCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceeccc
Q psy8430 184 TVRLWSTQTGKCVLQYSGH-SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRT 262 (361)
Q Consensus 184 ~i~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (361)
.|++.+...+..+..|... ...|...+.+ +.+++.++ ++.+.++++..+.. .
T Consensus 493 ~Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L---------------------~--- 545 (1158)
T 3ei3_A 493 SVRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAV-GRALYYLQIHPQEL---------------------R--- 545 (1158)
T ss_dssp CEEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEE---------------------E---
T ss_pred EEEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCce---------------------e---
Confidence 4666666555566667643 3356666654 34555555 67788887653210 0
Q ss_pred ccEEEeCCCCcEEEEEEcCC------CCEEEEEeC-CCcEEEeeCCCCeEEEEeecCC-CCCeEEEEE--cC--CCcc-c
Q psy8430 263 PVKELLGHSNVVIAADWLSD------GEQVITASW-DRVANLFDVETGTILQSLTGHD-EEPHILCVS--SY--YSKV-S 329 (361)
Q Consensus 263 ~~~~~~~~~~~v~~~~~~~~------~~~l~s~~~-d~~v~iwd~~~~~~~~~~~~h~-~~v~~~~~s--~s--~~~v-~ 329 (361)
..... .-...|.++++.|. +.+++.|.. |++++|+++.+.+.+....-.. ....++++. .+ +..+ -
T Consensus 546 ~~~~~-~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl 624 (1158)
T 3ei3_A 546 QISHT-EMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCAL 624 (1158)
T ss_dssp EEEEE-ECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEE
T ss_pred eeccc-CCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEe
Confidence 11111 12457899998763 479999997 9999999999876664433211 222222221 11 1111 1
Q ss_pred CCCeEEEEcCCCCC
Q psy8430 330 CDLFQRIQHLDCGT 343 (361)
Q Consensus 330 ~dg~i~iW~~d~~~ 343 (361)
.||.+--+.+|..+
T Consensus 625 ~dG~l~~~~~d~~t 638 (1158)
T 3ei3_A 625 GDGALFYFGLNIET 638 (1158)
T ss_dssp TTSEEEEEEECTTT
T ss_pred CCCeEEEEEEcCCC
Confidence 68887666556543
No 316
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=87.88 E-value=19 Score=34.14 Aligned_cols=155 Identities=7% Similarity=-0.068 Sum_probs=89.6
Q ss_pred CCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE-C-CCcEEEEeccccccc
Q psy8430 162 DGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS-G-DKSVHIWQAVINWEC 238 (361)
Q Consensus 162 ~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~-~-d~~i~lwd~~~~~~~ 238 (361)
.....+++++.+. +.++-...+.|.+.++........+...-.....|+++|....|.-.. . .+.|...++...
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~--- 156 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS--- 156 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC---
Confidence 4567899987555 555555668899999865433222334456678999998544444333 2 456666665422
Q ss_pred cCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeC-CCcEEEeeCCCCeEEEEeecCCCCCe
Q psy8430 239 LNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASW-DRVANLFDVETGTILQSLTGHDEEPH 317 (361)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~v~iwd~~~~~~~~~~~~h~~~v~ 317 (361)
....+...-.....+++++++..|+.+.. .+.|..+|+..... ..+...-....
T Consensus 157 ------------------------~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~ 211 (628)
T 4a0p_A 157 ------------------------ERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPF 211 (628)
T ss_dssp ------------------------SCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEE
T ss_pred ------------------------ceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCce
Confidence 12222234557889999998777776654 56788899864332 33332222223
Q ss_pred EEEEEcCCCccc--CCCeEEEEcCCCCCCCC
Q psy8430 318 ILCVSSYYSKVS--CDLFQRIQHLDCGTSEN 346 (361)
Q Consensus 318 ~~~~s~s~~~v~--~dg~i~iW~~d~~~~~~ 346 (361)
.+.+..+.++++ ..+.|... |..++..
T Consensus 212 glav~~~~ly~tD~~~~~I~~~--dk~tg~~ 240 (628)
T 4a0p_A 212 GLTQYQDYIYWTDWSRRSIERA--NKTSGQN 240 (628)
T ss_dssp EEEEETTEEEEEETTTTEEEEE--ETTTCCS
T ss_pred EEEEECCEEEEecCCCCEEEEE--ECCCCCc
Confidence 333333333332 56777777 6545443
No 317
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=87.38 E-value=16 Score=32.85 Aligned_cols=149 Identities=15% Similarity=0.128 Sum_probs=90.5
Q ss_pred ceeeeEEeeccC----CCeEEEEEcCCCCEEEEEeC-------CCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecC---C
Q psy8430 150 SCYKIRSFSGHR----DGVWDVAVRPGQPVLGSASA-------DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN---K 215 (361)
Q Consensus 150 ~~~~~~~l~~h~----~~V~~l~~~~~~~~l~s~s~-------d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~---~ 215 (361)
+..+++.+.-|. ..|..-..++++++++..|- .|.+.+|..+.+. .+.+.||...-..+...-+ .
T Consensus 135 ~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~ 213 (494)
T 1bpo_A 135 ESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEES 213 (494)
T ss_dssp SCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSEEEEEEEECTTCSSEE
T ss_pred CCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeeeeeeEEEecCCCCCCc
Confidence 335555555553 44666667888887664432 4678899986543 4567777655444433211 1
Q ss_pred CEEEEEECC---CcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEE-E---eCCCCcEEEEEEcCCCCEEEE
Q psy8430 216 DLVLSASGD---KSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKE-L---LGHSNVVIAADWLSDGEQVIT 288 (361)
Q Consensus 216 ~~l~s~~~d---~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~v~~~~~~~~~~~l~s 288 (361)
++|+-+... +.++|-++.....- .......... + ..-.+...++..++....++.
T Consensus 214 ~lf~fa~r~~~g~kLhi~Ei~~~~~~------------------~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyv 275 (494)
T 1bpo_A 214 TLFCFAVRGQAGGKLHIIEVGTPPTG------------------NQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 275 (494)
T ss_dssp EEEEEEECSTTCCEEEEEECSCCCTT------------------CCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEE
T ss_pred eEEEEEEecCCCcEEEEEEcCCCccC------------------CCCccceeeeeeCCcccccCceeEEEecccCCEEEE
Confidence 234444443 68899888532000 0000000111 1 122456678899999999999
Q ss_pred EeCCCcEEEeeCCCCeEEEEeecCCCCCe
Q psy8430 289 ASWDRVANLFDVETGTILQSLTGHDEEPH 317 (361)
Q Consensus 289 ~~~d~~v~iwd~~~~~~~~~~~~h~~~v~ 317 (361)
-+.-|.+++||++||.++..-.-....|.
T Consensus 276 iTK~G~i~lyDleTgt~i~~nrIs~~~iF 304 (494)
T 1bpo_A 276 ITKYGYIHLYDLETGTCIYMNRISGETIF 304 (494)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred EecCceEEEEecccceeeeeecccCCceE
Confidence 99999999999999999887665555553
No 318
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=87.29 E-value=12 Score=31.21 Aligned_cols=107 Identities=11% Similarity=0.091 Sum_probs=54.7
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEE--EEEeCCCCCeEEEEEecCCCEEEEEECC-----CcEEEEecccccccc
Q psy8430 172 GQPVLGSASAD-----RTVRLWSTQTGKCV--LQYSGHSGSVNSVRFLPNKDLVLSASGD-----KSVHIWQAVINWECL 239 (361)
Q Consensus 172 ~~~~l~s~s~d-----~~i~~wd~~~~~~~--~~~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~i~lwd~~~~~~~~ 239 (361)
++.+++.|+.+ ..+.+||..+.+-. .........-..+. .++.+++.|+.+ ..+.+||+.+..
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~--- 186 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGH--- 186 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTE---
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCc---
Confidence 46667777654 35888998776432 22221111112222 256677777654 347778875441
Q ss_pred CCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEeeCCCCeEE
Q psy8430 240 NNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-----RVANLFDVETGTIL 306 (361)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~ 306 (361)
+.. +..+.........+.+ ++..++.|+.+ ..+.+||+.+.+-.
T Consensus 187 ------------------W~~---~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 187 ------------------WTN---VTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp ------------------EEE---ECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred ------------------EEe---CCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEE
Confidence 111 1011111111222333 56677777654 46899999877543
No 319
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=87.14 E-value=6.7 Score=32.83 Aligned_cols=88 Identities=17% Similarity=0.199 Sum_probs=42.8
Q ss_pred eecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCC-------CcEEEEeCCCCeEEEE--EeCCCCCeEEEEEecC
Q psy8430 144 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD-------RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPN 214 (361)
Q Consensus 144 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d-------~~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~ 214 (361)
+.........+..+........++.+ ++.+++.|+.+ ..+.+||+.+.+-... +.........+.+ +
T Consensus 129 ~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 204 (302)
T 2xn4_A 129 YNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--N 204 (302)
T ss_dssp EETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--T
T ss_pred EeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--C
Confidence 44444444444433322222222223 45566666543 3588899877643222 1111111122222 5
Q ss_pred CCEEEEEECCC-----cEEEEecccc
Q psy8430 215 KDLVLSASGDK-----SVHIWQAVIN 235 (361)
Q Consensus 215 ~~~l~s~~~d~-----~i~lwd~~~~ 235 (361)
+.+++.|+.++ .+.+||+.+.
T Consensus 205 ~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 205 NLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp TEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred CEEEEECCCCCCcccceEEEEeCCCC
Confidence 66777776543 5778887654
No 320
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=86.63 E-value=3 Score=39.89 Aligned_cols=37 Identities=14% Similarity=0.187 Sum_probs=30.8
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEeec
Q psy8430 273 VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG 311 (361)
Q Consensus 273 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 311 (361)
.|.++.+ +..++++-+.|..+|+|++.+++++.+..-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4555555 578999999999999999999999887764
No 321
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=85.46 E-value=2.6 Score=25.38 Aligned_cols=37 Identities=16% Similarity=0.218 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q psy8430 50 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKL 86 (361)
Q Consensus 50 ~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~ 86 (361)
.+.+...+.++||..+..|..+|..|...+..|.+..
T Consensus 16 SR~RKk~~~~~LE~~v~~L~~eN~~L~~~~~~L~~~~ 52 (55)
T 1dh3_A 16 SRRKKKEYVKSLENRVAVLENQNKTLIEELKALKDLY 52 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4566778899999999999999999999999888664
No 322
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=85.29 E-value=15 Score=30.69 Aligned_cols=106 Identities=13% Similarity=0.081 Sum_probs=53.5
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEEEE--EeCCCCCeEEEEEecCCCEEEEEECC-----CcEEEEecccccccc
Q psy8430 172 GQPVLGSASAD-----RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGD-----KSVHIWQAVINWECL 239 (361)
Q Consensus 172 ~~~~l~s~s~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~i~lwd~~~~~~~~ 239 (361)
++.+++.|+.+ ..+.+||..+.+-... +......-..+.+ ++.+++.|+.+ ..+.+||+.+..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~--- 195 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNE--- 195 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE---
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCe---
Confidence 45666666643 3578888877643221 1111111122222 56666666654 347778775441
Q ss_pred CCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEeeCCCCeE
Q psy8430 240 NNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD-----RVANLFDVETGTI 305 (361)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~ 305 (361)
+.. +..+........++.+ ++..++.|+.+ ..+.+||+.+.+-
T Consensus 196 ------------------W~~---~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 196 ------------------WRM---ITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp ------------------EEE---CCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred ------------------Eee---CCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 111 0011111111222333 66677777654 5589999987654
No 323
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=84.66 E-value=2.4 Score=22.17 Aligned_cols=29 Identities=21% Similarity=0.363 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q psy8430 58 FSQIEREFELLYLENLNLQDKIDMLMEKL 86 (361)
Q Consensus 58 ~~~~e~~~~~l~~e~~~l~~~~~~l~~~~ 86 (361)
..|+|..++.|..++.+|+..+..|++.+
T Consensus 3 MnQLE~kVEeLl~~n~~Le~eV~rLk~ll 31 (34)
T 2oxj_A 3 MXQLEXKVXELLXKNXHLEXEVXRLKXLV 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 45788899999999999999888887654
No 324
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=84.39 E-value=13 Score=31.11 Aligned_cols=62 Identities=5% Similarity=0.043 Sum_probs=34.5
Q ss_pred CCCEEEEEeCC----CcEEEEeCCCCeEEEE--EeCCCCCeEEEEEecCCCEEEEEECC------CcEEEEecccc
Q psy8430 172 GQPVLGSASAD----RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGD------KSVHIWQAVIN 235 (361)
Q Consensus 172 ~~~~l~s~s~d----~~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~~~d------~~i~lwd~~~~ 235 (361)
++.+++.|+.+ ..+.+||..+.+-... +......-..+. -++.+++.|+.+ ..+.+||+.+.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 128 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTE 128 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCC
Confidence 45577777654 5688899887643222 211111112222 256677777655 35778887654
No 325
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=84.22 E-value=17 Score=30.30 Aligned_cols=88 Identities=14% Similarity=0.113 Sum_probs=42.5
Q ss_pred eecCccceeeeEEeeccCCCeEEEEEcCCCCEEEEEeCC------CcEEEEeCCCCeEEEE--EeCCCCCeEEEEEecCC
Q psy8430 144 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASAD------RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNK 215 (361)
Q Consensus 144 ~~~~~~~~~~~~~l~~h~~~V~~l~~~~~~~~l~s~s~d------~~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~~ 215 (361)
+.........+..+......-..+.+ ++.+++.|+.+ ..+.+||..+.+-... +......-..+. -++
T Consensus 75 ~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~ 150 (306)
T 3ii7_A 75 YNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANG 150 (306)
T ss_dssp EETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETT
T ss_pred EeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECC
Confidence 44444444444443322222222333 46677777765 4688899887643222 111111111222 256
Q ss_pred CEEEEEEC---------CCcEEEEecccc
Q psy8430 216 DLVLSASG---------DKSVHIWQAVIN 235 (361)
Q Consensus 216 ~~l~s~~~---------d~~i~lwd~~~~ 235 (361)
.+++.|+. -..+.+||+.+.
T Consensus 151 ~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 151 LIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp EEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred EEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 66666553 234777887654
No 326
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=84.01 E-value=1.8 Score=44.25 Aligned_cols=38 Identities=18% Similarity=0.302 Sum_probs=32.8
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeEEEEee
Q psy8430 273 VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 310 (361)
Q Consensus 273 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 310 (361)
.+.+++..++..++++-+.|++++||++.+++|+.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45556677788999999999999999999999998864
No 327
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=83.48 E-value=3.4 Score=25.70 Aligned_cols=37 Identities=19% Similarity=0.266 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q psy8430 50 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKL 86 (361)
Q Consensus 50 ~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~ 86 (361)
.+.|......+|+.+++.|..+|..|...+..|.+..
T Consensus 24 sR~RK~~~~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l 60 (63)
T 2dgc_A 24 SRARKLQRMKQLEDKVEELLSKNYHLENEVARLKKLV 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667778888999999999999999999999888764
No 328
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=83.46 E-value=2.1 Score=22.34 Aligned_cols=28 Identities=29% Similarity=0.423 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q psy8430 59 SQIEREFELLYLENLNLQDKIDMLMEKL 86 (361)
Q Consensus 59 ~~~e~~~~~l~~e~~~l~~~~~~l~~~~ 86 (361)
.|+|..++.|..++.+|+..+..|.+-+
T Consensus 3 ~QLE~kVEeLl~~n~~Le~EV~RLk~Ll 30 (33)
T 3m48_A 3 AQLEAKVEELLSKNWNLENEVARLKKLV 30 (33)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 4688899999999999998888877653
No 329
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=83.32 E-value=3.2 Score=25.72 Aligned_cols=41 Identities=17% Similarity=0.233 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhccccc
Q psy8430 50 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRES 90 (361)
Q Consensus 50 ~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~~~~ 90 (361)
.+.+......+++.+++.|..+|..|..++..|+.+.....
T Consensus 16 ~R~rKk~~~~~Le~~v~~L~~~n~~L~~~v~~L~~e~~~Lk 56 (62)
T 1jnm_A 16 SRKRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQLK 56 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677788899999999999999999999999988865554
No 330
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=82.69 E-value=2.3 Score=26.23 Aligned_cols=40 Identities=20% Similarity=0.198 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhcccc
Q psy8430 50 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRE 89 (361)
Q Consensus 50 ~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~~~ 89 (361)
.+.+......+++.+++.+..+|..|..++..|+.+....
T Consensus 16 ~R~rKk~~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~L 55 (61)
T 1t2k_D 16 SRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQL 55 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777888999999999999999999999998876554
No 331
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=82.69 E-value=2.2 Score=26.58 Aligned_cols=41 Identities=17% Similarity=0.152 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhccccc
Q psy8430 50 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRES 90 (361)
Q Consensus 50 ~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~~~~ 90 (361)
.+.+.......++.+.+.|..+|.+|..++..|+.+.....
T Consensus 17 ~R~KKk~~~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk 57 (63)
T 1ci6_A 17 YRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLK 57 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677778888999999999999999999999988766554
No 332
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=82.38 E-value=15 Score=38.37 Aligned_cols=130 Identities=15% Similarity=0.128 Sum_probs=75.5
Q ss_pred CCeEEEEEcCCCCEEEEEe-------CCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEe--cC-CCEEEEEEC---CCcEE
Q psy8430 162 DGVWDVAVRPGQPVLGSAS-------ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL--PN-KDLVLSASG---DKSVH 228 (361)
Q Consensus 162 ~~V~~l~~~~~~~~l~s~s-------~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~--~~-~~~l~s~~~---d~~i~ 228 (361)
..|..-..++++.+++..| ..|.+.+|..+.+. .+.+.||.+.-..+... +. ..+|+-+.. .+.++
T Consensus 151 ~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLh 229 (1630)
T 1xi4_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 229 (1630)
T ss_pred CeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEE
Confidence 4466666788888766443 35788888886443 34456665544443332 11 223332222 36888
Q ss_pred EEecccc-ccccCCCCCCCCCCCCCCCCCceecccccEEE---eCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCe
Q psy8430 229 IWQAVIN-WECLNNDNDSDLDESKEPDESSITLRTPVKEL---LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT 304 (361)
Q Consensus 229 lwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 304 (361)
|-++... ..... .. ...+..+ ..-.....++..++....++..+.-|.++++|+.||.
T Consensus 230 i~Ei~~~~~~~~~-----------------f~-kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~ 291 (1630)
T 1xi4_A 230 IIEVGTPPTGNQP-----------------FP-KKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 291 (1630)
T ss_pred EEecCCCccCCCC-----------------Cc-cccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccch
Confidence 8887543 10000 00 0000001 1123455678888888899999999999999999999
Q ss_pred EEEEee
Q psy8430 305 ILQSLT 310 (361)
Q Consensus 305 ~~~~~~ 310 (361)
++..-.
T Consensus 292 ~i~~~r 297 (1630)
T 1xi4_A 292 CIYMNR 297 (1630)
T ss_pred hhhhcc
Confidence 876444
No 333
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=81.83 E-value=2.6 Score=26.22 Aligned_cols=40 Identities=20% Similarity=0.233 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhcccc
Q psy8430 50 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRE 89 (361)
Q Consensus 50 ~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~~~ 89 (361)
.+.+.......++.+++.|..+|..|+..+..|+++....
T Consensus 17 cR~rKk~~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~L 56 (63)
T 2wt7_A 17 CRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKL 56 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567778888999999999999999999999888775544
No 334
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=81.65 E-value=36 Score=32.11 Aligned_cols=115 Identities=4% Similarity=-0.138 Sum_probs=71.9
Q ss_pred CCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCE-EEEEEC-CCcEEEEecccccc
Q psy8430 161 RDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL-VLSASG-DKSVHIWQAVINWE 237 (361)
Q Consensus 161 ~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~-l~s~~~-d~~i~lwd~~~~~~ 237 (361)
......+++++.+. ++++-...+.|.+.++........+...-.....|++.|.+.. +++-.. .+.|...++...
T Consensus 83 ~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~-- 160 (619)
T 3s94_A 83 LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-- 160 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSC--
T ss_pred CCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCC--
Confidence 35688999999555 5555566789999998754333333344566789999996554 444322 345555554321
Q ss_pred ccCCCCCCCCCCCCCCCCCceecccccEEE-eCCCCcEEEEEEcCCCCEEEEEe-CCCcEEEeeCCC
Q psy8430 238 CLNNDNDSDLDESKEPDESSITLRTPVKEL-LGHSNVVIAADWLSDGEQVITAS-WDRVANLFDVET 302 (361)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~ 302 (361)
....+ ...-.....+++++++..|+.+. ..+.|..+|+..
T Consensus 161 -------------------------~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 161 -------------------------SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 202 (619)
T ss_dssp -------------------------SCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC
T ss_pred -------------------------ceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC
Confidence 11122 12345678999999777766664 456788888864
No 335
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=81.54 E-value=17 Score=30.49 Aligned_cols=62 Identities=6% Similarity=0.034 Sum_probs=33.6
Q ss_pred CCCEEEEEeC-C-----CcEEEEeCCCCeEEEE--EeCCCCCeEEEEEecCCCEEEEEECCC-----cEEEEecccc
Q psy8430 172 GQPVLGSASA-D-----RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGDK-----SVHIWQAVIN 235 (361)
Q Consensus 172 ~~~~l~s~s~-d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~~~d~-----~i~lwd~~~~ 235 (361)
++.+++.|+. + ..+.+||..+.+-... +......-.++.+ ++.+++.|+.++ .+.+||+.+.
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCC
Confidence 4556677765 2 4688899877642221 1111111122222 667777777654 4777887654
No 336
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=81.45 E-value=17 Score=30.50 Aligned_cols=62 Identities=6% Similarity=0.087 Sum_probs=33.9
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEEEE--EeCCCCCeEEEEEecCCCEEEEEECC-----CcEEEEecccc
Q psy8430 172 GQPVLGSASAD-----RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGD-----KSVHIWQAVIN 235 (361)
Q Consensus 172 ~~~~l~s~s~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~~~d-----~~i~lwd~~~~ 235 (361)
++.+++.|+.+ ..+.+||+.+.+-... +......-..+.+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 46677777654 4588899876643211 1111111122222 56677777654 45788887654
No 337
>2xz2_A CSTF-50, isoform B; RNA-binding protein, 3' END mRNA maturation, transcription; 1.40A {Drosophila melanogaster}
Probab=80.42 E-value=0.05 Score=33.73 Aligned_cols=35 Identities=11% Similarity=-0.064 Sum_probs=31.0
Q ss_pred ccccccccccceeecccchhhhHHHhhcCCcCCcc
Q psy8430 10 KSTKHKRTASGKLSNLGDQDLSMLRTHLNSEYDDV 44 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~~~~~L~~e~~~~ 44 (361)
.+.+|+.+.|+||++|-.+|++..+..|.......
T Consensus 12 ~iK~Re~LYrLIISQL~YDG~~~iA~~L~~~v~~~ 46 (66)
T 2xz2_A 12 LVKNREILYRLMISQLMYDGLEKFAMELSMLVKAD 46 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTCC
T ss_pred hhhHHHHHHHHHHHHHHHhhHHHHHHHHHhhcCCC
Confidence 47788999999999999999999999999888833
No 338
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=80.17 E-value=28 Score=29.99 Aligned_cols=116 Identities=16% Similarity=0.245 Sum_probs=77.0
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCC
Q psy8430 167 VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSD 246 (361)
Q Consensus 167 l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~ 246 (361)
.-.+|..+.||--. ..++.+||+++...+..+.- ...|.-=+|.... .|+-.+ +..|.-|++...
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~----------- 136 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGE----------- 136 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSS-EEEEEE-SSEEEEEESSTT-----------
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCC-eEEEEc-CCcEEEEcccCC-----------
Confidence 44688888877776 67999999999988888874 5677777887544 333333 567999987532
Q ss_pred CCCCCCCCCCceecccccEEEeCC----CCcEEEEEEcCCCCEEEEEeC-------CCcEEEeeCCCCeEEEEeecC
Q psy8430 247 LDESKEPDESSITLRTPVKELLGH----SNVVIAADWLSDGEQVITASW-------DRVANLFDVETGTILQSLTGH 312 (361)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~~-------d~~v~iwd~~~~~~~~~~~~h 312 (361)
..|.+.+.-| ...|..-..+++.+|++..+- .|.+.+|..+.+ .-+.+.||
T Consensus 137 --------------s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGh 198 (365)
T 2xzh_A 137 --------------SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGH 198 (365)
T ss_dssp --------------CCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCS
T ss_pred --------------CCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeee
Confidence 1255555544 346777777888888765432 366778888753 33344444
No 339
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=80.07 E-value=34 Score=30.90 Aligned_cols=55 Identities=15% Similarity=0.091 Sum_probs=36.2
Q ss_pred cCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCC---eEEEEEe-----C----CCCCeEEEEEecC
Q psy8430 160 HRDGVWDVAVRPGQP-VLGSASADRTVRLWSTQTG---KCVLQYS-----G----HSGSVNSVRFLPN 214 (361)
Q Consensus 160 h~~~V~~l~~~~~~~-~l~s~s~d~~i~~wd~~~~---~~~~~~~-----~----h~~~v~~v~~~~~ 214 (361)
.-..-+.|+|.|+|. .|+.+...|.|++++.... ..+..+. + .......|+|+|+
T Consensus 12 gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 12 GLRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp EESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 345678999999996 4555677899999975422 1222221 1 1356789999995
No 340
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=79.51 E-value=4.9 Score=20.86 Aligned_cols=28 Identities=11% Similarity=0.223 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q psy8430 59 SQIEREFELLYLENLNLQDKIDMLMEKL 86 (361)
Q Consensus 59 ~~~e~~~~~l~~e~~~l~~~~~~l~~~~ 86 (361)
.|+|..++++..++..|+..+..|++.+
T Consensus 3 nQLEdKvEeLl~~~~~Le~EV~RLk~lL 30 (33)
T 3c3g_A 3 KXIEXKLXEIXSKXYHXENXLARIKXLL 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 4688888888888888888887776543
No 341
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=79.48 E-value=6.8 Score=36.35 Aligned_cols=96 Identities=10% Similarity=-0.011 Sum_probs=58.5
Q ss_pred CCeEEEEEecCCCEEEEEE-CCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCC
Q psy8430 204 GSVNSVRFLPNKDLVLSAS-GDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSD 282 (361)
Q Consensus 204 ~~v~~v~~~~~~~~l~s~~-~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 282 (361)
.....+..+|+|++++.++ .+.++.++|+.+-....... ....+..+..-..-.-.....+|.++
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k--------------~~~~~~~~~ae~e~GlGPlHt~Fd~~ 388 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGK--------------LADPRDVIVGEPELGLGPLHTTFDGR 388 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTC--------------CSCGGGGEEECCBCCSCEEEEEECSS
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcc--------------ccCcccceEeeccCCCcccEEEECCC
Confidence 4456788899999977665 47899999987543221100 00111122211122345667889999
Q ss_pred CCEEEEEeCCCcEEEeeCCCC----------eEEEEeecCC
Q psy8430 283 GEQVITASWDRVANLFDVETG----------TILQSLTGHD 313 (361)
Q Consensus 283 ~~~l~s~~~d~~v~iwd~~~~----------~~~~~~~~h~ 313 (361)
|.-..+---|..|.-|++... ..+..+..|=
T Consensus 389 G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Y 429 (638)
T 3sbq_A 389 GNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHY 429 (638)
T ss_dssp SEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSS
T ss_pred CceEeeeeecceEEEEeccHHHHHhcCccCCeeeecccccc
Confidence 944445557999999998753 4556665543
No 342
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=79.04 E-value=6.3 Score=21.88 Aligned_cols=32 Identities=22% Similarity=0.303 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhh
Q psy8430 54 LNSLFSQIEREFELLYLENLNLQDKIDMLMEK 85 (361)
Q Consensus 54 l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~ 85 (361)
|.+-.+.+.+|+.+..+.+.++|.++.+|++.
T Consensus 7 l~qkI~kVdrEI~Kte~kI~~lqkKlkeLee~ 38 (42)
T 2l5g_B 7 LIQNMDRVDREITMVEQQISKLKKKQQQLEEE 38 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44455567888889999999999999998865
No 343
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=79.04 E-value=17 Score=30.48 Aligned_cols=24 Identities=17% Similarity=0.389 Sum_probs=17.3
Q ss_pred CCCEEEEEeCCC-----cEEEeeCCCCeE
Q psy8430 282 DGEQVITASWDR-----VANLFDVETGTI 305 (361)
Q Consensus 282 ~~~~l~s~~~d~-----~v~iwd~~~~~~ 305 (361)
+++.++.|+.++ .+.+||+.+.+-
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred CCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 667777777654 478899987654
No 344
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=78.44 E-value=4.5 Score=20.25 Aligned_cols=25 Identities=28% Similarity=0.352 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHhh
Q psy8430 61 IEREFELLYLENLNLQDKIDMLMEK 85 (361)
Q Consensus 61 ~e~~~~~l~~e~~~l~~~~~~l~~~ 85 (361)
+|+++.++..-..++|++++.|++.
T Consensus 4 lee~~r~l~~ivq~lq~r~drle~t 28 (32)
T 2akf_A 4 LEEDVRNLNAIVQKLQERLDRLEET 28 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777777777778888888877764
No 345
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=77.82 E-value=40 Score=30.38 Aligned_cols=117 Identities=15% Similarity=0.233 Sum_probs=76.4
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCC
Q psy8430 166 DVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDS 245 (361)
Q Consensus 166 ~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~ 245 (361)
+.-.+|..+.||--. ..++.+||+++...+..+.- ...|.-=+|.... .|+-.+ +..|.-|++...
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~---------- 135 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGE---------- 135 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETT-EEEEEC-SSEEEEEESSSS----------
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCC-eEEEEc-CCeeEEecccCC----------
Confidence 344788888777765 67999999999988888874 4456666776543 333332 667999998532
Q ss_pred CCCCCCCCCCCceecccccEEEeCC----CCcEEEEEEcCCCCEEEEEe-------CCCcEEEeeCCCCeEEEEeecC
Q psy8430 246 DLDESKEPDESSITLRTPVKELLGH----SNVVIAADWLSDGEQVITAS-------WDRVANLFDVETGTILQSLTGH 312 (361)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~-------~d~~v~iwd~~~~~~~~~~~~h 312 (361)
..|.+.+.-| ...|..-..+++.+|++..+ -.|.+.+|..+.+. -+.+.||
T Consensus 136 ---------------s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGh 197 (494)
T 1bpo_A 136 ---------------SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGH 197 (494)
T ss_dssp ---------------CCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCS
T ss_pred ---------------CCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheee
Confidence 1255555544 34677777888888886543 23667788877532 2334444
No 346
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=77.80 E-value=3.7 Score=24.90 Aligned_cols=33 Identities=21% Similarity=0.562 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhh
Q psy8430 53 KLNSLFSQIEREFELLYLENLNLQDKIDMLMEK 85 (361)
Q Consensus 53 ~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~ 85 (361)
....+++++..+++.+..++.+|++++..++++
T Consensus 24 EVD~FLd~v~~~~~~l~~e~~~L~~~~~~l~~~ 56 (57)
T 2wuj_A 24 EVNEFLAQVRKDYEIVLRKKTELEAKVNELDER 56 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344577788889999999999999998877654
No 347
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=77.25 E-value=4.9 Score=21.30 Aligned_cols=30 Identities=23% Similarity=0.253 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHhhcc
Q psy8430 58 FSQIEREFELLYLENLNLQDKIDMLMEKLD 87 (361)
Q Consensus 58 ~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~ 87 (361)
..|+|..+++|..++..|+.++..|++.+.
T Consensus 3 MnQLE~KVEeLl~~~~~Le~eV~RLk~ll~ 32 (36)
T 1kd8_B 3 VKQLKAKVEELKSKLWHLKNKVARLKKKNA 32 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 346888888888888888888877776543
No 348
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=76.65 E-value=6.3 Score=20.56 Aligned_cols=29 Identities=17% Similarity=0.267 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q psy8430 58 FSQIEREFELLYLENLNLQDKIDMLMEKL 86 (361)
Q Consensus 58 ~~~~e~~~~~l~~e~~~l~~~~~~l~~~~ 86 (361)
..|+|..++.|..++..|+..+..|+..+
T Consensus 3 MnQLEdKVEeLl~~~~~Le~EV~RLk~ll 31 (34)
T 3c3f_A 3 MXQIEXKLEXILSXLYHXENEXARIXKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 35688888888888888888887776543
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=76.55 E-value=17 Score=34.88 Aligned_cols=63 Identities=10% Similarity=0.130 Sum_probs=35.7
Q ss_pred CCCEEEEEeCCC------cEEEEeCCCCeEEEE--EeCCCCCeEEEEEecCCCEEEEEECCC--cEEEEecccc
Q psy8430 172 GQPVLGSASADR------TVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGDK--SVHIWQAVIN 235 (361)
Q Consensus 172 ~~~~l~s~s~d~------~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~~~d~--~i~lwd~~~~ 235 (361)
++.+++.||.++ .+.+||..+..-... +... ..-.+.+...++.+++.|+.++ .+.+||+.+.
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~-R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~ 523 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT-RFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEE 523 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBC-CBSCEEEECTTSCEEEECCBCSSCSEEEEETTTT
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCC-cccceEEEEcCCEEEEECCCCCCCCEEEEECCCC
Confidence 666777776543 577888877532211 1111 1111222323778888877654 6888887654
No 350
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=75.11 E-value=7 Score=25.43 Aligned_cols=42 Identities=21% Similarity=0.098 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhcccccccc
Q psy8430 52 FKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIIN 93 (361)
Q Consensus 52 ~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~~~~~~~ 93 (361)
.+-..-..+++...+.|..+|..|+.++..|..+........
T Consensus 32 ~krk~r~~e~~~r~~~L~~eN~~L~~~v~~L~~E~~~Lr~ll 73 (78)
T 1gu4_A 32 DKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLF 73 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445566778888999999999999999988876665443
No 351
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=74.92 E-value=5.6 Score=21.09 Aligned_cols=28 Identities=25% Similarity=0.295 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q psy8430 59 SQIEREFELLYLENLNLQDKIDMLMEKL 86 (361)
Q Consensus 59 ~~~e~~~~~l~~e~~~l~~~~~~l~~~~ 86 (361)
.|+|..++++..++..|+..+..|+..+
T Consensus 4 nQLE~kVEeLl~~~~~Le~EV~RL~~ll 31 (36)
T 1kd8_A 4 KQLEAEVEEIESEVWHLENEVARLEKEN 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 4678888888888888888777776654
No 352
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=74.64 E-value=5.4 Score=26.59 Aligned_cols=42 Identities=21% Similarity=0.098 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhcccccccc
Q psy8430 52 FKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIIN 93 (361)
Q Consensus 52 ~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~~~~~~~ 93 (361)
.+-.....+++...+.|..+|..|+.++..|..+........
T Consensus 32 ~krk~r~~e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~ll 73 (87)
T 1hjb_A 32 DKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLF 73 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445566788888999999999999999988877665544
No 353
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=74.63 E-value=32 Score=27.72 Aligned_cols=61 Identities=13% Similarity=0.008 Sum_probs=41.1
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE-------EEEEeCCCCCeEEEEEecCCCEEEEEECCCcEE
Q psy8430 164 VWDVAVRPGQPVLGSASADRTVRLWSTQTGKC-------VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVH 228 (361)
Q Consensus 164 V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~-------~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~ 228 (361)
..++.|+|+|.+.++ .||.|.-++-.+... ...-.+-=..+..|.|.|+|.+.+.. |+.+.
T Consensus 90 F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 90 FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 578899999988777 569998887643211 11111111467999999999888776 77743
No 354
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=74.01 E-value=30 Score=28.96 Aligned_cols=62 Identities=10% Similarity=0.098 Sum_probs=32.7
Q ss_pred CCCEEEEEeC------CCcEEEEeCCCCeEEEE--EeCCCCCeEEEEEecCCCEEEEEECCC-----cEEEEecccc
Q psy8430 172 GQPVLGSASA------DRTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGDK-----SVHIWQAVIN 235 (361)
Q Consensus 172 ~~~~l~s~s~------d~~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~~~d~-----~i~lwd~~~~ 235 (361)
++.+++.|+. -..+.+||+.+.+-... .........++.+ ++.+++.|+.++ .+.+||+.+.
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCC
Confidence 4666666654 23588999887643222 1111111122222 567777776543 4667777644
No 355
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=73.63 E-value=31 Score=28.92 Aligned_cols=62 Identities=13% Similarity=0.038 Sum_probs=31.7
Q ss_pred CCCEEEEEeCC-------CcEEEEeCCCCeEEEE--EeCCCCCeEEEEEecCCCEEEEEECC------CcEEEEecccc
Q psy8430 172 GQPVLGSASAD-------RTVRLWSTQTGKCVLQ--YSGHSGSVNSVRFLPNKDLVLSASGD------KSVHIWQAVIN 235 (361)
Q Consensus 172 ~~~~l~s~s~d-------~~i~~wd~~~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~~~d------~~i~lwd~~~~ 235 (361)
++.+++.|+.+ ..+.+||..+.+-... +...... .+++. .++.+++.|+.+ ..+.+||+.+.
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYG-HNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEES-CEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTT
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccc-cEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCC
Confidence 45667777654 2477888877643221 1110001 11111 356666666532 34788887654
No 356
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=73.34 E-value=7.8 Score=20.10 Aligned_cols=28 Identities=14% Similarity=0.052 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q psy8430 59 SQIEREFELLYLENLNLQDKIDMLMEKL 86 (361)
Q Consensus 59 ~~~e~~~~~l~~e~~~l~~~~~~l~~~~ 86 (361)
.|+|..++++..++..++..+..+++.+
T Consensus 3 nQLEdKVEell~~~~~le~EV~Rl~~ll 30 (33)
T 2wq1_A 3 KQLEDKIEENTSKIYHNTNEIARNTKLV 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 4688888888888888888877776543
No 357
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=73.28 E-value=5.8 Score=20.76 Aligned_cols=28 Identities=18% Similarity=0.297 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q psy8430 59 SQIEREFELLYLENLNLQDKIDMLMEKL 86 (361)
Q Consensus 59 ~~~e~~~~~l~~e~~~l~~~~~~l~~~~ 86 (361)
.|+|..++.+..++..++..+..|++.+
T Consensus 4 nQLEdKvEeLl~~~~~L~~EV~RLk~lL 31 (34)
T 2bni_A 4 KQIEDKLEEILSKGHHICNELARIKKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHccHHHHHHHHHHHHHh
Confidence 5688888888888888888887776543
No 358
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=73.21 E-value=6.5 Score=21.36 Aligned_cols=22 Identities=41% Similarity=0.437 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHhhhhHHH
Q psy8430 57 LFSQIEREFELLYLENLNLQDK 78 (361)
Q Consensus 57 ~~~~~e~~~~~l~~e~~~l~~~ 78 (361)
+.+++|.++..+.+|+..+.++
T Consensus 4 lvaqlenevaslenenetlkkk 25 (49)
T 3he5_A 4 LVAQLENEVASLENENETLKKK 25 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcccHHHHHh
Confidence 4445555555555555555444
No 359
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=71.85 E-value=49 Score=28.64 Aligned_cols=72 Identities=13% Similarity=0.137 Sum_probs=41.4
Q ss_pred eEEEEEcCCCCEEEEEe------------CCCcEEEEeCCC--CeE-EEEEeC-----CCCCeEEEEEec--CCC-EEEE
Q psy8430 164 VWDVAVRPGQPVLGSAS------------ADRTVRLWSTQT--GKC-VLQYSG-----HSGSVNSVRFLP--NKD-LVLS 220 (361)
Q Consensus 164 V~~l~~~~~~~~l~s~s------------~d~~i~~wd~~~--~~~-~~~~~~-----h~~~v~~v~~~~--~~~-~l~s 220 (361)
.-++.+.|+|..+++++ .+|.|.++|..+ ++. ...+.+ .......+.+.+ ++. +|+.
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 34566777775544442 689999999873 222 112332 234677888766 344 3433
Q ss_pred E-EC--CCcEEEEecccc
Q psy8430 221 A-SG--DKSVHIWQAVIN 235 (361)
Q Consensus 221 ~-~~--d~~i~lwd~~~~ 235 (361)
+ .. +.+|.+|++...
T Consensus 132 vnh~~~~s~ielf~~d~~ 149 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEE 149 (355)
T ss_dssp EECSTTCCEEEEEEEETT
T ss_pred EECCCCCCeEEEEEEECC
Confidence 3 33 467888877543
No 360
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=71.48 E-value=9.1 Score=20.05 Aligned_cols=28 Identities=18% Similarity=0.242 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q psy8430 59 SQIEREFELLYLENLNLQDKIDMLMEKL 86 (361)
Q Consensus 59 ~~~e~~~~~l~~e~~~l~~~~~~l~~~~ 86 (361)
.|+|...+.+..++..++..+..|.+-+
T Consensus 4 ~QLEdKVEeLl~~n~~Le~EV~RLk~LL 31 (34)
T 1uo4_A 4 KQIEDKGEEILSKLYHIENELARIKKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4688888888888888888887776543
No 361
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=70.92 E-value=6.1 Score=23.53 Aligned_cols=27 Identities=19% Similarity=0.204 Sum_probs=10.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy8430 49 SVKFKLNSLFSQIEREFELLYLENLNL 75 (361)
Q Consensus 49 ~~~~~l~~~~~~~e~~~~~l~~e~~~l 75 (361)
.....|..-.+++..+++.|..++.++
T Consensus 19 ~d~eaLk~E~~eLk~k~~~L~~~~~el 45 (53)
T 2yy0_A 19 PEIELLRLELAEMKEKYEAIVEENKKL 45 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333443333333333333333333333
No 362
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=70.52 E-value=5.5 Score=18.83 Aligned_cols=20 Identities=35% Similarity=0.493 Sum_probs=11.5
Q ss_pred HHHHHHhhhhHHHHHHHHhh
Q psy8430 66 ELLYLENLNLQDKIDMLMEK 85 (361)
Q Consensus 66 ~~l~~e~~~l~~~~~~l~~~ 85 (361)
.++++|.+.+|+++..++..
T Consensus 4 delykeledlqerlrklrkk 23 (27)
T 3twe_A 4 DELYKELEDLQERLRKLRKK 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34555666666666655543
No 363
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=70.50 E-value=32 Score=29.59 Aligned_cols=74 Identities=7% Similarity=0.026 Sum_probs=46.0
Q ss_pred CCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEE---EeCCCCcEEEEEE
Q psy8430 203 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKE---LLGHSNVVIAADW 279 (361)
Q Consensus 203 ~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~ 279 (361)
-.....++|.|+|+++++ ..+|.|.+++ .+.. ..+.. ..........++|
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~------------------------~~~~~~~v~~~g~~~p~gia~ 82 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRL------------------------STYAELSVYHRGESGLLGLAL 82 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEE------------------------EEEEECCCCCSTTCSEEEEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCc------------------------cEeecceEeecCCCCceeEEE
Confidence 446789999999986555 5679999887 2210 01111 1122356789999
Q ss_pred cCC---CCEEEEEeC-C-----CcEEEeeCCCC
Q psy8430 280 LSD---GEQVITASW-D-----RVANLFDVETG 303 (361)
Q Consensus 280 ~~~---~~~l~s~~~-d-----~~v~iwd~~~~ 303 (361)
+|+ +.+|+.+.. . +.|..|+...+
T Consensus 83 ~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~ 115 (352)
T 2ism_A 83 HPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGE 115 (352)
T ss_dssp CTTTTTSCEEEEEEEECTTSSEEEEEEEEECSS
T ss_pred CCCCCCCCEEEEEEecCCCCCccEEEEEEeCCC
Confidence 998 555555443 2 56777877643
No 364
>1p9i_A Cortexillin I/GCN4 hybrid peptide; coiled-coil, unknown function; 1.17A {Synthetic} SCOP: h.1.10.1
Probab=69.91 E-value=7.9 Score=18.92 Aligned_cols=22 Identities=27% Similarity=0.329 Sum_probs=11.9
Q ss_pred HHHHHHHHHhhhhHHHHHHHHh
Q psy8430 63 REFELLYLENLNLQDKIDMLME 84 (361)
Q Consensus 63 ~~~~~l~~e~~~l~~~~~~l~~ 84 (361)
..+..+..|+.++..+++++..
T Consensus 6 allasleaenkqlkakveella 27 (31)
T 1p9i_A 6 ALLASLEAENKQLKAKVEELLA 27 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445556666666665544
No 365
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=69.47 E-value=9.7 Score=19.91 Aligned_cols=27 Identities=22% Similarity=0.270 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhh
Q psy8430 59 SQIEREFELLYLENLNLQDKIDMLMEK 85 (361)
Q Consensus 59 ~~~e~~~~~l~~e~~~l~~~~~~l~~~ 85 (361)
.|+|..+++|..++..|+..+..|++.
T Consensus 4 nQLEdkVEeLl~~~~~Le~eV~RL~~l 30 (34)
T 2hy6_A 4 KQLADAVEELASANYHLANAVARLAKA 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 468888888888888888887777654
No 366
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=67.96 E-value=4.5 Score=21.90 Aligned_cols=21 Identities=24% Similarity=0.325 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHhhhhHHHHHH
Q psy8430 61 IEREFELLYLENLNLQDKIDM 81 (361)
Q Consensus 61 ~e~~~~~l~~e~~~l~~~~~~ 81 (361)
+|.+++.+.+....+..++..
T Consensus 25 leselqalekklaalksklqa 45 (48)
T 1g6u_A 25 LESELQALEKKLAALKSKLQA 45 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 555555555555555555543
No 367
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=67.42 E-value=56 Score=27.58 Aligned_cols=111 Identities=12% Similarity=0.035 Sum_probs=62.6
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeE-EEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccc
Q psy8430 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC-VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC 238 (361)
Q Consensus 160 h~~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~-~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~ 238 (361)
+.+.+..+.+.+++..++.+ .++.|.. ..+.|+. ......+...+..+.+.|++.+++.+...+..+-+|-. +
T Consensus 120 ~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G--- 193 (327)
T 2xbg_A 120 LPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-Q--- 193 (327)
T ss_dssp CSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT-C---
T ss_pred CCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC-C---
Confidence 34567888877777666555 4555422 1222321 12223456688999999988777665443333434320 0
Q ss_pred cCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEee
Q psy8430 239 LNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299 (361)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd 299 (361)
..++.+ -......+..+.+.+++..+ .++.+|.+++.+
T Consensus 194 --------------------~tW~~~--~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~ 231 (327)
T 2xbg_A 194 --------------------TAWEPH--NRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSD 231 (327)
T ss_dssp --------------------SSCEEE--ECCSSSCEEEEEECTTSCEE-EEETTTEEEEEE
T ss_pred --------------------CceeEC--CCCCCCccceeEECCCCCEE-EEeCCceEEEec
Confidence 001111 12345678888999988765 445678777764
No 368
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A
Probab=65.43 E-value=11 Score=18.70 Aligned_cols=27 Identities=26% Similarity=0.386 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhh
Q psy8430 59 SQIEREFELLYLENLNLQDKIDMLMEK 85 (361)
Q Consensus 59 ~~~e~~~~~l~~e~~~l~~~~~~l~~~ 85 (361)
.++|+++.....+|-.+.+.+.+|+.+
T Consensus 4 aqlekevaqaeaenyqleqevaqlehe 30 (33)
T 1fmh_A 4 AQLEKEVAQAEAENYQLEQEVAQLEHE 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 458888888888888888888877754
No 369
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=65.34 E-value=50 Score=28.40 Aligned_cols=74 Identities=5% Similarity=-0.123 Sum_probs=45.2
Q ss_pred CCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCCCCCCCCCCCceecccccEEE---eCCCCcEEEEEE
Q psy8430 203 SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDLDESKEPDESSITLRTPVKEL---LGHSNVVIAADW 279 (361)
Q Consensus 203 ~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~ 279 (361)
-.....++|.|++++++ +..+|.|.+++. .+. ..+..+ .........++|
T Consensus 28 l~~P~~ia~~pdG~l~V-~e~~g~I~~~d~-~G~-------------------------~~~~~~~v~~~g~~g~~gia~ 80 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLV-TERPGRLVLISP-SGK-------------------------KLVASFDVANVGEAGLLGLAL 80 (354)
T ss_dssp CSCEEEEEEEETTEEEE-EETTTEEEEECS-SCE-------------------------EEEEECCCCCSTTCSEEEEEE
T ss_pred CCCCeEEEEcCCCeEEE-EeCCCEEEEEeC-CCc-------------------------eEeeccceeecCCCceeeEEe
Confidence 45678999999998555 456699988863 221 011111 112346788999
Q ss_pred cCC---CCEEEEEeC----C----CcEEEeeCCCC
Q psy8430 280 LSD---GEQVITASW----D----RVANLFDVETG 303 (361)
Q Consensus 280 ~~~---~~~l~s~~~----d----~~v~iwd~~~~ 303 (361)
+|+ +..|+.+.. + +.|..|+....
T Consensus 81 ~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~ 115 (354)
T 3a9g_A 81 HPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGS 115 (354)
T ss_dssp CTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSS
T ss_pred CCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCC
Confidence 997 555554433 2 56777776543
No 370
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=64.25 E-value=11 Score=24.01 Aligned_cols=40 Identities=13% Similarity=0.059 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhcccc
Q psy8430 50 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRE 89 (361)
Q Consensus 50 ~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~~~ 89 (361)
++.|....+.+||..+..+...+..+......|.......
T Consensus 23 fReRK~~~i~~LE~~v~~le~~~~~l~~en~~Lr~~i~~L 62 (70)
T 1gd2_E 23 FRKRKEDHLKALETQVVTLKELHSSTTLENDQLRQKVRQL 62 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666667777777777777666655555555555444333
No 371
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=63.17 E-value=67 Score=26.95 Aligned_cols=59 Identities=0% Similarity=-0.034 Sum_probs=34.1
Q ss_pred EEcCCCCEEEEEeCC--------------CcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEE--CCCcEEEEe
Q psy8430 168 AVRPGQPVLGSASAD--------------RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS--GDKSVHIWQ 231 (361)
Q Consensus 168 ~~~~~~~~l~s~s~d--------------~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~--~d~~i~lwd 231 (361)
-++++|.+|.-+... ..|+..++..++...... .. +..|+++++.++-.. .++.-.||.
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~---~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP---DP--CIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC---SC--EEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec---CC--ccEEEEeCCEEEEEeecCCCCceEEE
Confidence 467888877766543 357777776654332222 11 236778888877655 344444443
No 372
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=62.78 E-value=7.3 Score=39.90 Aligned_cols=38 Identities=18% Similarity=0.200 Sum_probs=32.3
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe
Q psy8430 163 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS 200 (361)
Q Consensus 163 ~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~ 200 (361)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45556677788899999999999999999999988864
No 373
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=62.70 E-value=15 Score=35.20 Aligned_cols=37 Identities=8% Similarity=0.109 Sum_probs=30.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC
Q psy8430 163 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG 201 (361)
Q Consensus 163 ~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~ 201 (361)
.|.++.+. ..++++-+.|+++|+|++.+++++.+..-
T Consensus 223 ~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 46655554 67999999999999999999998877653
No 374
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=62.02 E-value=18 Score=31.13 Aligned_cols=22 Identities=14% Similarity=0.178 Sum_probs=17.6
Q ss_pred CEEEEEECCCcEEEEecccccc
Q psy8430 216 DLVLSASGDKSVHIWQAVINWE 237 (361)
Q Consensus 216 ~~l~s~~~d~~i~lwd~~~~~~ 237 (361)
..++.++.||.|.-+|..+++.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~ 32 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHI 32 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEE
T ss_pred CEEEEEeCCCeEEEEECCCCcE
Confidence 4677889999999998877754
No 375
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=61.06 E-value=76 Score=26.89 Aligned_cols=12 Identities=8% Similarity=0.152 Sum_probs=9.2
Q ss_pred CcEEEEeCCCCe
Q psy8430 183 RTVRLWSTQTGK 194 (361)
Q Consensus 183 ~~i~~wd~~~~~ 194 (361)
..+.+||..+.+
T Consensus 168 ~~v~~yd~~~~~ 179 (357)
T 2uvk_A 168 KFLLSFDPSTQQ 179 (357)
T ss_dssp CEEEEEETTTTE
T ss_pred ccEEEEeCCCCc
Confidence 478889987764
No 376
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=57.96 E-value=75 Score=26.94 Aligned_cols=28 Identities=11% Similarity=0.074 Sum_probs=18.1
Q ss_pred CCCEEEEEeCCC------cEEEeeCCCCeEEEEe
Q psy8430 282 DGEQVITASWDR------VANLFDVETGTILQSL 309 (361)
Q Consensus 282 ~~~~l~s~~~d~------~v~iwd~~~~~~~~~~ 309 (361)
+++.++.|+.++ .|.++++++++.+...
T Consensus 316 ~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 316 NNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp TTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred CCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 678888888653 3555688877766544
No 377
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=57.42 E-value=68 Score=29.86 Aligned_cols=60 Identities=10% Similarity=0.115 Sum_probs=42.6
Q ss_pred CCeEEEEEcCCCCEEEEEeC------------CCcEEEEeCCCCeEEEEEeCC-CCCeEEEEEecCCCEEEEE
Q psy8430 162 DGVWDVAVRPGQPVLGSASA------------DRTVRLWSTQTGKCVLQYSGH-SGSVNSVRFLPNKDLVLSA 221 (361)
Q Consensus 162 ~~V~~l~~~~~~~~l~s~s~------------d~~i~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~ 221 (361)
.....|.|+++|.+.++... .+.+..++..+|+....+.+. ...++.++|+|+++.|+.+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 45677999999997774432 125666777778766555543 4679999999999887655
No 378
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=57.41 E-value=19 Score=18.84 Aligned_cols=27 Identities=7% Similarity=0.097 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhh
Q psy8430 59 SQIEREFELLYLENLNLQDKIDMLMEK 85 (361)
Q Consensus 59 ~~~e~~~~~l~~e~~~l~~~~~~l~~~ 85 (361)
.|+|..++++..++..++..+..+.+.
T Consensus 4 nQledKvEel~~~~~~l~nEv~Rl~~l 30 (34)
T 2r2v_A 4 KQVADKLEEVASKLYHNANELARVAKL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 457777777777777777777666554
No 379
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=55.19 E-value=25 Score=19.47 Aligned_cols=26 Identities=23% Similarity=0.362 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHh
Q psy8430 59 SQIEREFELLYLENLNLQDKIDMLME 84 (361)
Q Consensus 59 ~~~e~~~~~l~~e~~~l~~~~~~l~~ 84 (361)
.++|.....+...+.+|.+++.-|+.
T Consensus 6 ~eLE~r~k~le~~naeLEervstLq~ 31 (42)
T 2oqq_A 6 SELENRVKDLENKNSELEERLSTLQN 31 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444433
No 380
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=54.61 E-value=56 Score=30.59 Aligned_cols=58 Identities=12% Similarity=0.118 Sum_probs=40.2
Q ss_pred eEEEEEcCCCCEEEEEeCC------------CcEEEEeCCCCeEEEEEeCC-CCCeEEEEEecCCCEEEEE
Q psy8430 164 VWDVAVRPGQPVLGSASAD------------RTVRLWSTQTGKCVLQYSGH-SGSVNSVRFLPNKDLVLSA 221 (361)
Q Consensus 164 V~~l~~~~~~~~l~s~s~d------------~~i~~wd~~~~~~~~~~~~h-~~~v~~v~~~~~~~~l~s~ 221 (361)
.=-|+|+|.|.++++-..+ +.+.+.+..+++..+-+.++ ...++.++|+|+++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3558899999877765432 23555666677765555543 5789999999998776543
No 381
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=53.75 E-value=35 Score=21.67 Aligned_cols=25 Identities=20% Similarity=0.178 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHH
Q psy8430 58 FSQIEREFELLYLENLNLQDKIDML 82 (361)
Q Consensus 58 ~~~~e~~~~~l~~e~~~l~~~~~~l 82 (361)
.+.+++++..+..++.+|+..++.+
T Consensus 42 I~eLEk~L~ekd~eI~~LqseLDKf 66 (72)
T 3nmd_A 42 IDELELELDQKDELIQMLQNELDKY 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444444444444444444433
No 382
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=53.65 E-value=74 Score=30.38 Aligned_cols=65 Identities=17% Similarity=0.137 Sum_probs=37.4
Q ss_pred CCCCEEEEEeCCC--cEEEEeCCCCeEEEEE-----eCCCCCeEEEEEecC-CCEEEEEEC--C-----CcEEEEecccc
Q psy8430 171 PGQPVLGSASADR--TVRLWSTQTGKCVLQY-----SGHSGSVNSVRFLPN-KDLVLSASG--D-----KSVHIWQAVIN 235 (361)
Q Consensus 171 ~~~~~l~s~s~d~--~i~~wd~~~~~~~~~~-----~~h~~~v~~v~~~~~-~~~l~s~~~--d-----~~i~lwd~~~~ 235 (361)
.++.+++.||.++ .+.+||..+..-...- ......-.++.+..+ +.+++.|+. + ..+.+||+.+.
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 3677888887655 6889998876432211 111112233555554 556666665 2 34778887655
No 383
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=53.08 E-value=25 Score=20.84 Aligned_cols=27 Identities=30% Similarity=0.444 Sum_probs=17.6
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhhcccc
Q psy8430 63 REFELLYLENLNLQDKIDMLMEKLDRE 89 (361)
Q Consensus 63 ~~~~~l~~e~~~l~~~~~~l~~~~~~~ 89 (361)
.+++.|..|+.+|+.++..|.++....
T Consensus 19 ~d~eaLk~E~~eLk~k~~~L~~~~~el 45 (53)
T 2yy0_A 19 PEIELLRLELAEMKEKYEAIVEENKKL 45 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777777777777666664443
No 384
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=52.08 E-value=37 Score=21.55 Aligned_cols=44 Identities=16% Similarity=0.014 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhccccccccccC
Q psy8430 53 KLNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDRESIINEKY 96 (361)
Q Consensus 53 ~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~~~~~~~~~~ 96 (361)
.|..++..-.+++......+.+++.++.+.++.....+.+.++|
T Consensus 23 eLq~~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKf 66 (72)
T 3nmd_A 23 DLQYALQEKIEELRQRDALIDELELELDQKDELIQMLQNELDKY 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444433444444444455555555555555444444444333
No 385
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=49.83 E-value=1.2e+02 Score=25.97 Aligned_cols=37 Identities=19% Similarity=0.177 Sum_probs=27.6
Q ss_pred EEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccc
Q psy8430 198 QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI 234 (361)
Q Consensus 198 ~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~ 234 (361)
.+...-.....++|.|+|.++++--..|.|++++...
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~ 62 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKT 62 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTT
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCC
Confidence 4444456778999999999877765589999887543
No 386
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=46.68 E-value=1.2e+02 Score=25.08 Aligned_cols=61 Identities=5% Similarity=-0.164 Sum_probs=30.0
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEeeCCC-CeEEEEeecCCCCCeEEEEEcCC-CcccCCCeEEEE
Q psy8430 272 NVVIAADWLSDGEQVITASWDRVANLFDVET-GTILQSLTGHDEEPHILCVSSYY-SKVSCDLFQRIQ 337 (361)
Q Consensus 272 ~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~h~~~v~~~~~s~s~-~~v~~dg~i~iW 337 (361)
..|..++.-.. +.+.- .||.|+.|-... ++.-..... ...|..+.+...+ ..+. ||.|..|
T Consensus 180 ~~v~~i~~G~~--hs~al-~~G~v~~wG~n~~gqlg~p~~~-~~~v~~i~~G~~h~~al~-~g~v~~w 242 (282)
T 3qhy_B 180 SGVDDVAGGIF--HSLAL-KDGKVIAWGDNRYKQTTVPTEA-LSGVSAIASGEWYSLALK-NGKVIAW 242 (282)
T ss_dssp SSEEEEEECSS--EEEEE-ETTEEEEEECCTTSTTCCCGGG-GSSCCEEEECSSCEEEEE-TTEEEEE
T ss_pred CCeEEEEecCC--EEEEE-ECCeEEEEECCCCCCCCCCccc-CCCceEEEcCCCEEEEEE-CCEEEEe
Confidence 35666665432 33333 589999996543 222111111 1234333322222 2456 9999999
No 387
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=45.35 E-value=53 Score=34.49 Aligned_cols=106 Identities=13% Similarity=0.197 Sum_probs=67.2
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccccccccCCCCCCCC
Q psy8430 168 AVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLNNDNDSDL 247 (361)
Q Consensus 168 ~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~ 247 (361)
-.+|..+.||--. ..++.|||+++...+..+.- ...|.-=+|.....+ +-.+ +..|.-|++....
T Consensus 72 IMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~l-~lVT-~~aVyHW~~~~~s----------- 136 (1630)
T 1xi4_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTV-ALVT-DNAVYHWSMEGES----------- 136 (1630)
T ss_pred ccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCCee-EEEc-CCeEEEeccCCCC-----------
Confidence 3778777776664 67999999988877776663 445666677654333 3222 5679999884311
Q ss_pred CCCCCCCCCceecccccEEEeCC----CCcEEEEEEcCCCCEEEEEe-------CCCcEEEeeCCC
Q psy8430 248 DESKEPDESSITLRTPVKELLGH----SNVVIAADWLSDGEQVITAS-------WDRVANLFDVET 302 (361)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~-------~d~~v~iwd~~~ 302 (361)
.|.+.+.-| ...|..-..+++.+|++..| ..|.+.+|.++.
T Consensus 137 --------------~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er 188 (1630)
T 1xi4_A 137 --------------QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR 188 (1630)
T ss_pred --------------ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc
Confidence 133333222 34566667788888876433 347788888764
No 388
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=45.19 E-value=1.3e+02 Score=24.80 Aligned_cols=67 Identities=15% Similarity=0.103 Sum_probs=37.0
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCCCCCeEEEEEecCCCEEEEEECCCcEEEEeccc
Q psy8430 162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI 234 (361)
Q Consensus 162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~ 234 (361)
..|..++.......++ . ||.|..|-....-.+..-..-...|..|+.... ..+... ||.|..|-...
T Consensus 63 ~~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~ 129 (282)
T 3qhy_B 63 SGVDAIAAGNYHSLAL--K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDS 129 (282)
T ss_dssp SCCCEEEECSSEEEEE--E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCT
T ss_pred CCEEEEEeCCCEEEEE--E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCC
Confidence 3566666654433333 4 899999976532111000011346777776543 334445 99999997543
No 389
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=42.71 E-value=1.8e+02 Score=25.89 Aligned_cols=32 Identities=6% Similarity=0.114 Sum_probs=23.1
Q ss_pred CCCCeEEEEEecCCCEEEEEECCCcEEEEecc
Q psy8430 202 HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 233 (361)
Q Consensus 202 h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~ 233 (361)
.-.....++|.|+|+++++-...+.|.+++..
T Consensus 25 ~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~ 56 (454)
T 1cru_A 25 NLNKPHALLWGPDNQIWLTERATGKILRVNPE 56 (454)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTT
T ss_pred CCCCceEEEEcCCCcEEEEEcCCCEEEEEECC
Confidence 34567799999999977765444578888653
No 390
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=41.96 E-value=25 Score=25.97 Aligned_cols=13 Identities=31% Similarity=0.570 Sum_probs=0.0
Q ss_pred CCCcccccccccc
Q psy8430 2 PQSDTMSQKSTKH 14 (361)
Q Consensus 2 ~~~~~~~~~~~~~ 14 (361)
|+++-|.+.|.++
T Consensus 21 ~~~~~md~~l~~r 33 (152)
T 3a7p_A 21 PQTDSMDDLLIRR 33 (152)
T ss_dssp -------------
T ss_pred CcchhHHHHHHHH
Confidence 7788888777666
No 391
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=41.76 E-value=46 Score=18.70 Aligned_cols=32 Identities=16% Similarity=0.281 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhh
Q psy8430 54 LNSLFSQIEREFELLYLENLNLQDKIDMLMEK 85 (361)
Q Consensus 54 l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~ 85 (361)
++.+..++...-+.+.+.+..+..|++.+.+.
T Consensus 7 mydlvsel~~r~e~LE~Ri~~LE~KLd~L~~~ 38 (43)
T 2pnv_A 7 MYDMISDLNERSEDFEKRIVTLETKLETLIGS 38 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555566666666666666665544
No 392
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=41.56 E-value=38 Score=19.50 Aligned_cols=25 Identities=28% Similarity=0.396 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHH
Q psy8430 59 SQIEREFELLYLENLNLQDKIDMLM 83 (361)
Q Consensus 59 ~~~e~~~~~l~~e~~~l~~~~~~l~ 83 (361)
+++-++++.|..||.-+++.+.+-.
T Consensus 6 dQL~~QVe~Lk~ENshLrrEL~dNS 30 (54)
T 1deb_A 6 DQLLKQVEALKMENSNLRQELEDNS 30 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhhH
Confidence 3455555666666666655555433
No 393
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=40.29 E-value=2.5e+02 Score=26.77 Aligned_cols=111 Identities=9% Similarity=0.060 Sum_probs=66.3
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeCC------CCCeEEEEEecCCCEEEEEECCCcEEEEecccc
Q psy8430 162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH------SGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN 235 (361)
Q Consensus 162 ~~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h------~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~ 235 (361)
..|.++..+.+|.+.+. +.+ -+..++..+++... +... ...|.++...+++..|..|+. +-+..+|..++
T Consensus 146 ~~i~~i~~d~~g~lWig-t~~-Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~ 221 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYVG-TYN-GLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTG 221 (758)
T ss_dssp SCEEEEEECTTCCEEEE-ETT-EEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTT
T ss_pred CeEEEEEEcCCCCEEEE-eCC-CHhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCC
Confidence 56888988888876653 444 47778877665332 2211 234888888777765555553 45777876543
Q ss_pred ccccCCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCe
Q psy8430 236 WECLNNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT 304 (361)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 304 (361)
.. . ....+ ....|.++...++|.+.+. +.+ -+.+++..++.
T Consensus 222 ~~---------------------~---~~~~l--~~~~i~~i~~d~~g~lWig-T~~-Gl~~~~~~~~~ 262 (758)
T 3ott_A 222 QI---------------------K---QTEAF--HNNSIKSLALDGNGDLLAG-TDN-GLYVYHNDTTP 262 (758)
T ss_dssp EE---------------------E---EEEEE--EEEEEEEEEECTTCCEEEE-ETT-EEEEECCTTSC
T ss_pred eE---------------------E---eccCC--CCCeEEEEEEcCCCCEEEE-eCC-ceeEEecCCCc
Confidence 11 0 11111 1345888888877776554 444 47788876654
No 394
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=36.86 E-value=59 Score=21.12 Aligned_cols=36 Identities=17% Similarity=0.014 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q psy8430 51 KFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKL 86 (361)
Q Consensus 51 ~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~ 86 (361)
-.+-..+...++.+...+..+...++.+...|..++
T Consensus 42 L~kA~~yI~~L~~~~~~l~~e~~~L~~e~~~L~~~L 77 (80)
T 1nlw_A 42 LTKAKLHIKKLEDSDRKAVHQIDQLQREQRHLKRQL 77 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455566666666666666666666666665543
No 395
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=36.46 E-value=74 Score=21.06 Aligned_cols=22 Identities=27% Similarity=0.344 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHhhhhHHHHHHH
Q psy8430 61 IEREFELLYLENLNLQDKIDML 82 (361)
Q Consensus 61 ~e~~~~~l~~e~~~l~~~~~~l 82 (361)
+..+.+.+..++..|..++.+|
T Consensus 64 l~~~~~~L~~~n~~L~~rl~~L 85 (88)
T 1nkp_A 64 LISEEDLLRKRREQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3333334444444444444443
No 396
>1qp6_A Protein (alpha2D); de novo design, protein design, protein folding, bisecting U motif, four-helix bundle, helix-turn-helix, de novo protein; NMR {Synthetic} SCOP: k.16.1.1
Probab=34.33 E-value=47 Score=16.65 Aligned_cols=23 Identities=30% Similarity=0.502 Sum_probs=14.3
Q ss_pred HHHHHHHHHHH-----HhhhhHHHHHHH
Q psy8430 60 QIEREFELLYL-----ENLNLQDKIDML 82 (361)
Q Consensus 60 ~~e~~~~~l~~-----e~~~l~~~~~~l 82 (361)
++|+.+.++|+ ++.++.+++.+|
T Consensus 5 elekkfkelwkgprrgeieelhkkfhel 32 (35)
T 1qp6_A 5 ELEKKFKELWKGPRRGEIEELHKKFHEL 32 (35)
T ss_dssp HHHHHHHHHHSSSCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCccchHHHHHHHHHHH
Confidence 46666666653 666666666554
No 397
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=33.78 E-value=4.1e+02 Score=27.24 Aligned_cols=72 Identities=14% Similarity=0.094 Sum_probs=49.5
Q ss_pred CCCeEEEEEcCC------CCEEEEEeC-CCcEEEEeCCCCeEEEEEeC-CCCCeEEEEEec--CCCEEEEEECCCcEEEE
Q psy8430 161 RDGVWDVAVRPG------QPVLGSASA-DRTVRLWSTQTGKCVLQYSG-HSGSVNSVRFLP--NKDLVLSASGDKSVHIW 230 (361)
Q Consensus 161 ~~~V~~l~~~~~------~~~l~s~s~-d~~i~~wd~~~~~~~~~~~~-h~~~v~~v~~~~--~~~~l~s~~~d~~i~lw 230 (361)
...|.|+++.|. +.+++.|.. |++|+|+++.+.+.+....- ......++.+.. ...+|..|-.||.+.-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 467999998863 368999986 99999999987665544331 123445554432 33568888899987666
Q ss_pred ec
Q psy8430 231 QA 232 (361)
Q Consensus 231 d~ 232 (361)
.+
T Consensus 633 ~~ 634 (1158)
T 3ei3_A 633 GL 634 (1158)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 398
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=33.18 E-value=80 Score=21.25 Aligned_cols=26 Identities=19% Similarity=0.174 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHH
Q psy8430 52 FKLNSLFSQIEREFELLYLENLNLQD 77 (361)
Q Consensus 52 ~~l~~~~~~~e~~~~~l~~e~~~l~~ 77 (361)
..|.+-+=++|+.++.+..++..++.
T Consensus 33 qELIqEYl~LE~~~s~le~e~~rlr~ 58 (104)
T 3s9g_A 33 QELIKEYLELEKSLSRMEDENNRLRL 58 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444556666666555554443
No 399
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=32.18 E-value=92 Score=19.64 Aligned_cols=32 Identities=25% Similarity=0.279 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhh
Q psy8430 54 LNSLFSQIEREFELLYLENLNLQDKIDMLMEK 85 (361)
Q Consensus 54 l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~ 85 (361)
|.....+++.....+..++..|...+..|..+
T Consensus 34 LE~~v~~le~~~~~l~~en~~Lr~~i~~L~~E 65 (70)
T 1gd2_E 34 LETQVVTLKELHSSTTLENDQLRQKVRQLEEE 65 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444545555555555555555555443
No 400
>3he4_A Synzip6; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=31.42 E-value=71 Score=17.81 Aligned_cols=35 Identities=23% Similarity=0.256 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHh
Q psy8430 50 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLME 84 (361)
Q Consensus 50 ~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~ 84 (361)
.-.+|.+....+|.....+.+.+..+.+.+..++.
T Consensus 18 enaklenivarlendnanlekdianlekdianler 52 (56)
T 3he4_A 18 ENAKLENIVARLENDNANLEKDIANLEKDIANLER 52 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcchHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 34566666666666666666666666666665554
No 401
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=30.95 E-value=98 Score=20.49 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhccc
Q psy8430 54 LNSLFSQIEREFELLYLENLNLQDKIDMLMEKLDR 88 (361)
Q Consensus 54 l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~~ 88 (361)
+......|+.+...|..++..|...+..|...+..
T Consensus 41 ~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~ll~~ 75 (87)
T 1hjb_A 41 TQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQ 75 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445567777777777777777777766665443
No 402
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=30.83 E-value=69 Score=21.84 Aligned_cols=29 Identities=28% Similarity=0.329 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhhccc
Q psy8430 60 QIEREFELLYLENLNLQDKIDMLMEKLDR 88 (361)
Q Consensus 60 ~~e~~~~~l~~e~~~l~~~~~~l~~~~~~ 88 (361)
.+.++++.|..|+..|.++++.|+.++..
T Consensus 16 ~lr~ei~~Le~E~~rLr~~~~~LE~~Le~ 44 (100)
T 1go4_E 16 TLRLKVEELEGERSRLEEEKRMLEAQLER 44 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36667777778888888888777766533
No 403
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=30.00 E-value=1.2e+02 Score=19.89 Aligned_cols=27 Identities=30% Similarity=0.233 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHH
Q psy8430 54 LNSLFSQIEREFELLYLENLNLQDKID 80 (361)
Q Consensus 54 l~~~~~~~e~~~~~l~~e~~~l~~~~~ 80 (361)
|.+|-..++.++..-..++.++++.++
T Consensus 42 L~~LKkkl~~el~~h~~ei~~le~~i~ 68 (84)
T 1gmj_A 42 LAALKKHKENEISHHAKEIERLQKEIE 68 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333444444444444444333
No 404
>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1
Probab=29.84 E-value=67 Score=17.00 Aligned_cols=14 Identities=21% Similarity=0.055 Sum_probs=5.2
Q ss_pred HHHHHHHhhhhHHH
Q psy8430 65 FELLYLENLNLQDK 78 (361)
Q Consensus 65 ~~~l~~e~~~l~~~ 78 (361)
++...+++..|+++
T Consensus 16 ie~KdeeIa~Lk~e 29 (37)
T 1t6f_A 16 IEQKDNEIARLKKE 29 (37)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 33333333333333
No 405
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=28.71 E-value=1.2e+02 Score=19.57 Aligned_cols=33 Identities=15% Similarity=0.091 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q psy8430 54 LNSLFSQIEREFELLYLENLNLQDKIDMLMEKL 86 (361)
Q Consensus 54 l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~ 86 (361)
+......|+.+...|..++..|...+..|...+
T Consensus 41 ~~~r~~~L~~eN~~L~~~v~~L~~E~~~Lr~ll 73 (78)
T 1gu4_A 41 TQHKVLELTAENERLQKKVEQLSRELSTLRNLF 73 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455677777777777777777777666554
No 406
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=28.37 E-value=78 Score=17.29 Aligned_cols=30 Identities=20% Similarity=0.230 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q psy8430 51 KFKLNSLFSQIEREFELLYLENLNLQDKID 80 (361)
Q Consensus 51 ~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~ 80 (361)
.+-|.+.++.+-..+..|..+|..|..++.
T Consensus 8 mq~LNdrlAsyidkVR~LE~~N~~Le~~i~ 37 (39)
T 1gk7_A 8 LQELNDRFANYIDKVRFLEQQNKILLAELE 37 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555565666677777777766653
No 407
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=28.18 E-value=1.2e+02 Score=19.55 Aligned_cols=6 Identities=50% Similarity=0.296 Sum_probs=2.2
Q ss_pred HHHHHh
Q psy8430 67 LLYLEN 72 (361)
Q Consensus 67 ~l~~e~ 72 (361)
.+..+|
T Consensus 52 ~LkeEN 57 (79)
T 2zxx_A 52 RLRKEN 57 (79)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 408
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=28.04 E-value=1.4e+02 Score=22.84 Aligned_cols=38 Identities=8% Similarity=0.141 Sum_probs=26.6
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q psy8430 46 LPSSVKFKLNSLFSQIEREFELLYLENLNLQDKIDMLM 83 (361)
Q Consensus 46 ~~~~~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~ 83 (361)
++++.+.++..+.++...+...+..+..+.+.++.+|.
T Consensus 68 LT~EQq~ql~~I~~e~r~~~~~Lr~ql~akr~EL~aL~ 105 (175)
T 3lay_A 68 LTTEQQATAQKIYDDYYTQTSALRQQLISKRYEYNALL 105 (175)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888888888888877777766665555555555444
No 409
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=27.37 E-value=4.1e+02 Score=25.27 Aligned_cols=114 Identities=8% Similarity=-0.037 Sum_probs=66.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCCeEEEEEeC---CCCCeEEEEEecCCCEEEEEECCCcEEEEecccccccc
Q psy8430 163 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSG---HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECL 239 (361)
Q Consensus 163 ~V~~l~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~---h~~~v~~v~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~ 239 (361)
.|.++..+++|.+.+.++..+-+..+|..+++....... ....+.++....+|.+.+. +.+| +..++..+.....
T Consensus 473 ~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~G-l~~~~~~~~~~~~ 550 (758)
T 3ott_A 473 FINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FHGG-VMRINPKDESQQS 550 (758)
T ss_dssp CEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ETTE-EEEECC--CCCCB
T ss_pred eeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ecCc-eEEEecCCCceEE
Confidence 488999999998776444445588889887764432211 1246788887777776654 4444 7778765432100
Q ss_pred CCCCCCCCCCCCCCCCCceecccccEEEeCCCCcEEEEEEcCCCCEEEEEeCCCcEEEeeCCCCeE
Q psy8430 240 NNDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTI 305 (361)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 305 (361)
. ....+ ....|.++... +| .|..++..| +..+|..+.+.
T Consensus 551 ~----------------------~~~gl--~~~~i~~i~~~-~g-~lWi~t~~G-l~~~~~~~~~~ 589 (758)
T 3ott_A 551 I----------------------SFGSF--SNNEILSMTCV-KN-SIWVSTTNG-LWIIDRKTMDA 589 (758)
T ss_dssp C----------------------CCCC-----CCEEEEEEE-TT-EEEEEESSC-EEEEETTTCCE
T ss_pred e----------------------cccCC--CccceEEEEEC-CC-CEEEECCCC-eEEEcCCCcee
Confidence 0 00001 12457777664 55 455555555 77888887654
No 410
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=26.97 E-value=3.3e+02 Score=25.39 Aligned_cols=20 Identities=10% Similarity=0.136 Sum_probs=16.7
Q ss_pred CCcEEEEEEcCCCCEEEEEe
Q psy8430 271 SNVVIAADWLSDGEQVITAS 290 (361)
Q Consensus 271 ~~~v~~~~~~~~~~~l~s~~ 290 (361)
...++.++|+||++.|+.+-
T Consensus 530 ~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 530 GCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp TCEEEEEEECTTSSEEEEEE
T ss_pred CccccCCEECCCCCEEEEEE
Confidence 35789999999999887764
No 411
>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens}
Probab=26.44 E-value=1e+02 Score=18.01 Aligned_cols=34 Identities=18% Similarity=0.112 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q psy8430 49 SVKFKLNSLFSQIEREFELLYLENLNLQDKIDML 82 (361)
Q Consensus 49 ~~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l 82 (361)
+...|+..+-.++|+|++.+...+..-++.+.+.
T Consensus 14 EL~~rl~~Ld~~Me~Ei~elr~RY~~KRqPIldA 47 (51)
T 2jo8_A 14 DLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDA 47 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccHHHHHHHHHHHHHHHHhHhhHHHH
Confidence 4556777777778888888877777766666544
No 412
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=26.37 E-value=91 Score=20.97 Aligned_cols=20 Identities=10% Similarity=0.331 Sum_probs=8.9
Q ss_pred ChhHHHHHHHHHHHHHHHHH
Q psy8430 47 PSSVKFKLNSLFSQIEREFE 66 (361)
Q Consensus 47 ~~~~~~~l~~~~~~~e~~~~ 66 (361)
.+..+.+....++++...+.
T Consensus 43 qDqkr~kFee~fe~l~s~l~ 62 (94)
T 3fx7_A 43 RDARRDKFSEVLDNLKSTFN 62 (94)
T ss_dssp CSHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 34455554444444443333
No 413
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=26.04 E-value=1.4e+02 Score=19.31 Aligned_cols=25 Identities=8% Similarity=0.252 Sum_probs=13.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhh
Q psy8430 49 SVKFKLNSLFSQIEREFELLYLENL 73 (361)
Q Consensus 49 ~~~~~l~~~~~~~e~~~~~l~~e~~ 73 (361)
-.|.|+...+.+...+++.+.....
T Consensus 11 KLRrrl~E~~~q~qaEl~sLrrT~~ 35 (78)
T 3iv1_A 11 KLRWRMKEEMDRAQAELNALKRTEE 35 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3455556666666555555544333
No 414
>2wg5_A General control protein GCN4, proteasome-activating nucleotidase; transcription hydrolase complex, nucleotide-binding; 2.10A {Saccharomyces cerevisiae} PDB: 2wg6_A
Probab=25.16 E-value=61 Score=22.49 Aligned_cols=35 Identities=20% Similarity=0.278 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHhhccccccc
Q psy8430 58 FSQIEREFELLYLENLNLQDKIDMLMEKLDRESII 92 (361)
Q Consensus 58 ~~~~e~~~~~l~~e~~~l~~~~~~l~~~~~~~~~~ 92 (361)
..+++.++..+..+...++++++.+++-+......
T Consensus 9 ~~~l~~~~~~l~~~i~~lkeel~~L~~~P~~Vg~v 43 (109)
T 2wg5_A 9 MKQLEDKVEELLSKNYHLENEVARLRSPPLLVGVV 43 (109)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEE
Confidence 34677788888888888888888888765554433
No 415
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=25.04 E-value=1.4e+02 Score=19.22 Aligned_cols=34 Identities=12% Similarity=0.132 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q psy8430 53 KLNSLFSQIEREFELLYLENLNLQDKIDMLMEKL 86 (361)
Q Consensus 53 ~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~ 86 (361)
.-.++...+..+.+.+..+..++..+...|+.++
T Consensus 44 ~Ai~YI~~L~~~~~~l~~e~~~L~~~~~~L~~~l 77 (83)
T 1nkp_B 44 KATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQV 77 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555556566666666666666666555554
No 416
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=24.91 E-value=94 Score=17.06 Aligned_cols=27 Identities=33% Similarity=0.286 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhh
Q psy8430 59 SQIEREFELLYLENLNLQDKIDMLMEK 85 (361)
Q Consensus 59 ~~~e~~~~~l~~e~~~l~~~~~~l~~~ 85 (361)
-++|...+.+.+-+..++..+..++.+
T Consensus 20 lqlerdeqnlekiianlrdeiarlene 46 (52)
T 3he5_B 20 LQLERDEQNLEKIIANLRDEIARLENE 46 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHhhHHHHHHHHHHHHHHHHHH
Confidence 345555555555555555555555544
No 417
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=24.83 E-value=1.4e+02 Score=19.20 Aligned_cols=33 Identities=15% Similarity=0.100 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q psy8430 49 SVKFKLNSLFSQIEREFELLYLENLNLQDKIDM 81 (361)
Q Consensus 49 ~~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~ 81 (361)
+....|......+..+.+.+..++..|+.++..
T Consensus 47 ~yI~~L~~~~~~l~~e~~~L~~e~~~L~~~L~~ 79 (80)
T 1nlw_A 47 LHIKKLEDSDRKAVHQIDQLQREQRHLKRQLEK 79 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 445566666666777777777777777766653
No 418
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=24.07 E-value=1.5e+02 Score=22.74 Aligned_cols=37 Identities=19% Similarity=0.128 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q psy8430 50 VKFKLNSLFSQIEREFELLYLENLNLQDKIDMLMEKL 86 (361)
Q Consensus 50 ~~~~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~ 86 (361)
...+|......+..+++....|+..|++++..+++..
T Consensus 21 LV~~L~~En~~L~~ql~~k~~ei~~L~~ql~sl~~~~ 57 (190)
T 4emc_A 21 LVANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQV 57 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3445555555666667777777777777777666654
No 419
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=23.30 E-value=3.4e+02 Score=22.96 Aligned_cols=60 Identities=20% Similarity=0.167 Sum_probs=40.6
Q ss_pred CCeEEEEEcC-------CCCEEEEEeCCCcEEEEeCCCCeEEEE--E-eCCCCCeEEEEEecCCCEEEEE
Q psy8430 162 DGVWDVAVRP-------GQPVLGSASADRTVRLWSTQTGKCVLQ--Y-SGHSGSVNSVRFLPNKDLVLSA 221 (361)
Q Consensus 162 ~~V~~l~~~~-------~~~~l~s~s~d~~i~~wd~~~~~~~~~--~-~~h~~~v~~v~~~~~~~~l~s~ 221 (361)
.....+.|.. +|.++++.-..+.|...++..++.... + ......+..+++.|+|.++++.
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 4567788764 466777776778888888776644332 2 1234589999999999876653
No 420
>3ra3_A P1C; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=23.16 E-value=72 Score=15.14 Aligned_cols=16 Identities=44% Similarity=0.530 Sum_probs=7.6
Q ss_pred HHhhhhHHHHHHHHhh
Q psy8430 70 LENLNLQDKIDMLMEK 85 (361)
Q Consensus 70 ~e~~~l~~~~~~l~~~ 85 (361)
-||..+.+++..+.+.
T Consensus 7 fendaleqkiaalkqk 22 (28)
T 3ra3_A 7 FENDALEQKIAALKQK 22 (28)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHH
Confidence 3444555555444443
No 421
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=23.11 E-value=3.5e+02 Score=23.08 Aligned_cols=67 Identities=10% Similarity=-0.029 Sum_probs=33.4
Q ss_pred CCeEEEEEcC--CCCEEEEEeCCC----cEEEEeCCCCeEEEEEe------C--------CCCCeEEEEEecC--CCEEE
Q psy8430 162 DGVWDVAVRP--GQPVLGSASADR----TVRLWSTQTGKCVLQYS------G--------HSGSVNSVRFLPN--KDLVL 219 (361)
Q Consensus 162 ~~V~~l~~~~--~~~~l~s~s~d~----~i~~wd~~~~~~~~~~~------~--------h~~~v~~v~~~~~--~~~l~ 219 (361)
..|.+|+++| .+.+++.+ ..+ .|...+ +.|+.-..+. . ....|.++++.|. ...+.
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~-~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAA-RTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEE-EC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CceEEEEECCCCCCeEEEEe-cCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 5699999998 45455444 333 333322 2232111111 0 1125778888872 45555
Q ss_pred EEECCCcEEEE
Q psy8430 220 SASGDKSVHIW 230 (361)
Q Consensus 220 s~~~d~~i~lw 230 (361)
.+...+.|...
T Consensus 133 ~g~~~ggl~~S 143 (394)
T 3b7f_A 133 AGTSPQGLFRS 143 (394)
T ss_dssp EEEETTEEEEE
T ss_pred EEecCCcEEEE
Confidence 55555544433
No 422
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=22.48 E-value=1.4e+02 Score=18.02 Aligned_cols=33 Identities=15% Similarity=0.068 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhh
Q psy8430 53 KLNSLFSQIEREFELLYLENLNLQDKIDMLMEK 85 (361)
Q Consensus 53 ~l~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~ 85 (361)
.|..-...++.+...|..++..|+..+..|...
T Consensus 26 ~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~~ 58 (61)
T 1t2k_D 26 SLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQL 58 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555567777777777777777777766654
No 423
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=22.07 E-value=1.5e+02 Score=18.45 Aligned_cols=32 Identities=16% Similarity=0.141 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhc
Q psy8430 55 NSLFSQIEREFELLYLENLNLQDKIDMLMEKL 86 (361)
Q Consensus 55 ~~~~~~~e~~~~~l~~e~~~l~~~~~~l~~~~ 86 (361)
.....++|.++.....++.+|+..+..+....
T Consensus 24 de~I~eLE~~L~~kd~eI~eLr~~LdK~qsVl 55 (67)
T 1zxa_A 24 EERIKELEKRLSEKEEEIQELKRKLHKCQSVL 55 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34455677777777777777777777666553
No 424
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=21.39 E-value=85 Score=15.28 Aligned_cols=15 Identities=27% Similarity=0.306 Sum_probs=6.0
Q ss_pred HHHHhhhhHHHHHHH
Q psy8430 68 LYLENLNLQDKIDML 82 (361)
Q Consensus 68 l~~e~~~l~~~~~~l 82 (361)
+......+.++++.+
T Consensus 13 lesklqalekkleal 27 (31)
T 3ljm_A 13 LESKLQALEKKLEAL 27 (31)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333444444433
No 425
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=20.98 E-value=1.1e+02 Score=16.20 Aligned_cols=21 Identities=14% Similarity=0.245 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHhhhhHHHHH
Q psy8430 60 QIEREFELLYLENLNLQDKID 80 (361)
Q Consensus 60 ~~e~~~~~l~~e~~~l~~~~~ 80 (361)
...++++.+...|.-|++.+.
T Consensus 11 a~qqDIddlkrQN~~Le~Qir 31 (34)
T 1a93_B 11 THQQDIDDLKRQNALLEQQVR 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHhhHHHHHHHHHHHHHHHH
Confidence 344455555555555555543
No 426
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=20.37 E-value=4e+02 Score=24.87 Aligned_cols=19 Identities=11% Similarity=0.174 Sum_probs=16.2
Q ss_pred CCcEEEEEEcCCCCEEEEE
Q psy8430 271 SNVVIAADWLSDGEQVITA 289 (361)
Q Consensus 271 ~~~v~~~~~~~~~~~l~s~ 289 (361)
...++.++|+||++.|+..
T Consensus 530 gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 530 GCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp TCEEEEEEECTTSSEEEEE
T ss_pred CccCcCeeECCCCCEEEEE
Confidence 4689999999999988775
Done!