Your job contains 1 sequence.
>psy8430
MPQSDTMSQKSTKHKRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQ
IEREFELLYLENLNLQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLAS
NPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS
ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECLN
NDNDSDLDESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV
ETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQST
G
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8430
(361 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0038617 - symbol:CG12333 species:7227 "Drosophila ... 529 2.9e-56 2
MGI|MGI:1920393 - symbol:Wdr37 "WD repeat domain 37" spec... 557 7.0e-54 1
ZFIN|ZDB-GENE-030131-8101 - symbol:wdr37 "WD repeat domai... 524 2.2e-50 1
UNIPROTKB|B5DG67 - symbol:wdr12 "Ribosome biogenesis prot... 226 9.8e-17 1
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 196 2.8e-15 1
UNIPROTKB|B4DF38 - symbol:PAFAH1B1 "Platelet-activating f... 196 2.8e-15 1
UNIPROTKB|Q5BJ90 - symbol:wdr12 "Ribosome biogenesis prot... 212 5.4e-15 1
UNIPROTKB|Q5REE6 - symbol:WDR12 "Ribosome biogenesis prot... 208 1.7e-14 1
ZFIN|ZDB-GENE-030131-371 - symbol:wdr12 "WD repeat domain... 207 2.2e-14 1
UNIPROTKB|Q9GZL7 - symbol:WDR12 "Ribosome biogenesis prot... 207 2.2e-14 1
UNIPROTKB|F1P2Y8 - symbol:WDR12 "Uncharacterized protein"... 204 4.6e-14 1
UNIPROTKB|F1SHE8 - symbol:WDR12 "Uncharacterized protein"... 201 1.1e-13 1
UNIPROTKB|Q0VC24 - symbol:WDR12 "Ribosome biogenesis prot... 198 2.6e-13 1
UNIPROTKB|E2RNA4 - symbol:WDR12 "Uncharacterized protein"... 197 3.3e-13 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 191 9.0e-13 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 159 1.1e-12 2
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 192 1.2e-12 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 159 1.4e-12 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 191 1.6e-12 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 191 1.6e-12 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 191 1.6e-12 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 191 1.6e-12 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 191 1.6e-12 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 191 1.6e-12 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 191 1.6e-12 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 191 1.6e-12 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 191 1.6e-12 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 159 1.7e-12 2
MGI|MGI:1927241 - symbol:Wdr12 "WD repeat domain 12" spec... 189 2.9e-12 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 196 3.1e-12 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 188 3.5e-12 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 149 4.2e-12 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 185 7.9e-12 1
RGD|735072 - symbol:Wdr12 "WD repeat domain 12" species:1... 185 8.5e-12 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 159 1.5e-11 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 151 1.6e-11 2
CGD|CAL0000124 - symbol:ASC1 species:5476 "Candida albica... 154 2.8e-11 2
UNIPROTKB|P83774 - symbol:ASC1 "Guanine nucleotide-bindin... 154 2.8e-11 2
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 162 3.1e-11 2
GENEDB_PFALCIPARUM|PF08_0019 - symbol:PF08_0019 "receptor... 139 5.7e-11 2
UNIPROTKB|Q8IBA0 - symbol:PfRACK "Receptor for activated ... 139 5.7e-11 2
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 177 6.7e-11 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 141 1.5e-10 2
MGI|MGI:2144041 - symbol:Wsb2 "WD repeat and SOCS box-con... 131 2.9e-10 2
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 163 4.1e-10 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 170 4.8e-10 1
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 129 5.6e-10 2
RGD|1359599 - symbol:Wsb2 "WD repeat and SOCS box-contain... 131 5.9e-10 2
UNIPROTKB|Q9NYS7 - symbol:WSB2 "WD repeat and SOCS box-co... 131 5.9e-10 2
UNIPROTKB|F5H280 - symbol:WSB2 "WD repeat and SOCS box-co... 131 6.0e-10 2
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 174 6.1e-10 1
RGD|1310215 - symbol:Taf5l "TAF5-like RNA polymerase II, ... 148 6.4e-10 1
UNIPROTKB|B4DIE6 - symbol:WSB2 "cDNA FLJ59692, highly sim... 131 6.8e-10 2
POMBASE|SPAC6B12.15 - symbol:cpc2 "RACK1 ortholog Cpc2" s... 144 7.0e-10 2
UNIPROTKB|F1RKG5 - symbol:WSB2 "Uncharacterized protein" ... 131 7.5e-10 2
UNIPROTKB|Q0V8J1 - symbol:WSB2 "WD repeat and SOCS box-co... 131 7.6e-10 2
RGD|1305142 - symbol:Tbl3 "transducin (beta)-like 3" spec... 172 8.0e-10 1
UNIPROTKB|J3KNP2 - symbol:TBL3 "Transducin beta-like prot... 171 8.5e-10 1
MGI|MGI:2384863 - symbol:Tbl3 "transducin (beta)-like 3" ... 171 1.0e-09 1
UNIPROTKB|Q12788 - symbol:TBL3 "Transducin beta-like prot... 171 1.1e-09 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 133 1.3e-09 2
UNIPROTKB|F1MNS4 - symbol:TBL3 "Transducin beta-like prot... 170 1.3e-09 1
UNIPROTKB|Q2KJJ5 - symbol:TBL3 "Transducin beta-like prot... 170 1.3e-09 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 141 1.4e-09 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 163 1.6e-09 1
ZFIN|ZDB-GENE-030131-5143 - symbol:prpf4 "PRP4 pre-mRNA p... 137 1.7e-09 2
UNIPROTKB|Q7QJ33 - symbol:AGAP007244 "Ribosome biogenesis... 165 1.7e-09 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 162 2.1e-09 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 162 2.1e-09 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 162 2.1e-09 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 164 2.1e-09 1
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 151 2.2e-09 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 172 2.3e-09 1
UNIPROTKB|Q0VCN2 - symbol:MORG1 "Mitogen-activated protei... 131 3.0e-09 2
UNIPROTKB|F1P6A3 - symbol:WSB2 "Uncharacterized protein" ... 131 3.2e-09 2
ZFIN|ZDB-GENE-030131-5987 - symbol:taf5l "TAF5-like RNA p... 151 3.2e-09 2
MGI|MGI:1917302 - symbol:Prpf4 "PRP4 pre-mRNA processing ... 130 3.5e-09 2
UNIPROTKB|Q3MHE2 - symbol:PRPF4 "U4/U6 small nuclear ribo... 130 3.5e-09 2
UNIPROTKB|O43172 - symbol:PRPF4 "U4/U6 small nuclear ribo... 130 3.5e-09 2
UNIPROTKB|F1PZB0 - symbol:PRPF4 "Uncharacterized protein"... 130 3.8e-09 2
UNIPROTKB|I3LDL8 - symbol:PRPF4 "Uncharacterized protein"... 130 3.9e-09 2
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 164 4.0e-09 1
FB|FBgn0036354 - symbol:Poc1 "Proteome of centrioles 1" s... 161 4.0e-09 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 160 4.4e-09 1
UNIPROTKB|Q9BRX9 - symbol:WDR83 "WD repeat domain-contain... 134 4.4e-09 2
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 164 4.4e-09 1
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 164 4.4e-09 1
RGD|1311303 - symbol:Prpf4 "PRP4 pre-mRNA processing fact... 129 4.6e-09 2
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 163 5.2e-09 1
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 164 5.3e-09 1
UNIPROTKB|E1BEN8 - symbol:TAF5 "Uncharacterized protein" ... 144 5.3e-09 2
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 164 5.3e-09 1
WB|WBGene00006481 - symbol:plrg-1 species:6239 "Caenorhab... 161 6.5e-09 1
DICTYBASE|DDB_G0287337 - symbol:taf5 "TFIID subunit" spec... 171 6.6e-09 2
CGD|CAL0005013 - symbol:SWD3 species:5476 "Candida albica... 131 6.7e-09 2
UNIPROTKB|F1NNQ9 - symbol:PRPF4 "Uncharacterized protein"... 131 7.0e-09 2
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 163 7.6e-09 1
MGI|MGI:1915086 - symbol:Wdr83 "WD repeat domain containi... 156 8.7e-09 1
RGD|1306947 - symbol:Wdr83 "WD repeat domain 83" species:... 156 8.7e-09 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 150 9.4e-09 2
WARNING: Descriptions of 610 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0038617 [details] [associations]
symbol:CG12333 species:7227 "Drosophila melanogaster"
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046331 HSSP:P16649
GeneTree:ENSGT00640000091456 OMA:TGLPRDM EMBL:AY094717
RefSeq:NP_650723.1 UniGene:Dm.12926 SMR:Q9VE73 IntAct:Q9VE73
MINT:MINT-1593181 EnsemblMetazoa:FBtr0083655 GeneID:42218
KEGG:dme:Dmel_CG12333 UCSC:CG12333-RA FlyBase:FBgn0038617
InParanoid:Q9VE73 OrthoDB:EOG434TNF GenomeRNAi:42218 NextBio:827735
Uniprot:Q9VE73
Length = 487
Score = 529 (191.3 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 104/210 (49%), Positives = 137/210 (65%)
Query: 118 LASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLG 177
L+S K K +NK+K QTS+IVSSFK + +R F GH+DG+W VA + GQP++G
Sbjct: 117 LSSATGGSKAKASNKIKAQTSRIVSSFKAPTVVSTVVREFGGHKDGIWQVAAKAGQPIIG 176
Query: 178 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 237
+ASAD T +W ++ +C+LQY GH+GSVNS++F +DLVL+ SGD + HIWQA +NWE
Sbjct: 177 TASADHTACIWGVESARCLLQYQGHAGSVNSIKFHQQRDLVLTGSGDGTAHIWQAAVNWE 236
Query: 238 C--XXXXXXXXXXESKEP--DESSI-TLRTPVKELLG---HSNVVIAADWLSDGEQVITA 289
+S E D + TLRTP+ E G H +VV+AADWLS +Q+IT
Sbjct: 237 VPKKGHSSEEELDDSDEQVEDRDRVDTLRTPLCEFTGPGGHLSVVVAADWLSSMDQIITG 296
Query: 290 SWDRVANLFDVETGTILQSLTGHDEE-PHI 318
SWDR A L+DVETG LQ LTGHD E H+
Sbjct: 297 SWDRTAILWDVETGLPLQPLTGHDHELTHV 326
Score = 105 (42.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSVRFL 212
++ +GH + V+ P Q ++ +AS D T RLW + V + GH+ +V S F
Sbjct: 313 LQPLTGHDHELTHVSAHPTQRLVVTASRDTTFRLWDFREAIPAVSVFQGHTETVTSSVFA 372
Query: 213 PNKDLVLSASGDKSVHIWQ 231
+ D V+S S D+++ +W+
Sbjct: 373 RD-DKVVSGSDDRTIKVWE 390
Score = 68 (29.0 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 37 LNSEYDDVV-LPSSVKFK--LNSLFSQIEREFXXXXXXXXXXQDKIDMLMEKLDRESII 92
L S +DV +P F+ L+ LF+QIEREF Q+K+D+ +ES+I
Sbjct: 11 LTSLTEDVAAVPEDAPFRARLHVLFAQIEREFEQLYLENQALQEKLDIATTT--KESLI 67
>MGI|MGI:1920393 [details] [associations]
symbol:Wdr37 "WD repeat domain 37" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1920393 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00640000091456
EMBL:AK129254 EMBL:AK032582 EMBL:AK036203 EMBL:BC046236
IPI:IPI00387421 RefSeq:NP_001034477.1 RefSeq:NP_766033.1
UniGene:Mm.284654 ProteinModelPortal:Q8CBE3 SMR:Q8CBE3
IntAct:Q8CBE3 STRING:Q8CBE3 PhosphoSite:Q8CBE3 PaxDb:Q8CBE3
PRIDE:Q8CBE3 Ensembl:ENSMUST00000021572 Ensembl:ENSMUST00000054251
GeneID:207615 KEGG:mmu:207615 UCSC:uc007pki.1 CTD:22884
HOGENOM:HOG000013185 HOVERGEN:HBG057072 InParanoid:Q8CBE3
OMA:TGLPRDM OrthoDB:EOG4DZ1V5 NextBio:371979 Bgee:Q8CBE3
CleanEx:MM_WDR37 Genevestigator:Q8CBE3
GermOnline:ENSMUSG00000021147 Uniprot:Q8CBE3
Length = 496
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 151/372 (40%), Positives = 197/372 (52%)
Query: 6 TMSQKSTKHK-RTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIERE 64
T Q K K + S + +N +Q+ + L + E D LPSSV+ L LF QIERE
Sbjct: 10 TARQAKQKRKSHSLSIRRTNSSEQERTGLPREM-LEGQDSKLPSSVRSTLLELFGQIERE 68
Query: 65 FXXXXXXXXXXQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPS- 123
F + +ID L E+L E + D ++K K K S
Sbjct: 69 FENLYIENLELRREIDTLNERLAGEG-------QAIDG---AELSKGQLKTKASHSTSQL 118
Query: 124 AQKLKTTNKLKVQTSKIVSSFKT--SLLSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSAS 180
+QKLKTT K TSKIVSSFKT S C ++ + GHRDG+WDV+V QP VLG+AS
Sbjct: 119 SQKLKTT--YKASTSKIVSSFKTTTSRAICQLVKEYIGHRDGIWDVSVTRTQPIVLGTAS 176
Query: 181 ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINW---- 236
AD T LWS +TGKC+++Y+GH GSVNS++F P++ L L+ASGD++ HIW+ V+
Sbjct: 177 ADHTALLWSIETGKCLVKYAGHVGSVNSIKFHPSEQLALTASGDQTAHIWRYVVQLPTPQ 236
Query: 237 ---ECXXXXXXXXXXESKEPDESSI---------TLRTPVKELLGHSNVVIAADWLSDGE 284
+ E + DE I T+R P+ L H VVIAADWL G+
Sbjct: 237 PVADTSQQISGEDEIECSDKDEPDIDGDVSSDCPTVRVPLTSLKSHQGVVIAADWLVGGK 296
Query: 285 QVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTS 344
QV+TASWDR ANL+DVET ++ SLTGHD+E C V R
Sbjct: 297 QVVTASWDRTANLYDVETSELVHSLTGHDQELTHCCTHPTQRLVVTS--SRDTTFRLWDF 354
Query: 345 ENP-IHSVCVFQ 355
+P IHSV VFQ
Sbjct: 355 RDPSIHSVNVFQ 366
>ZFIN|ZDB-GENE-030131-8101 [details] [associations]
symbol:wdr37 "WD repeat domain 37" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-8101
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00640000091456 CTD:22884 EMBL:AL954666 EMBL:CT583671
IPI:IPI00900634 RefSeq:NP_001161736.1 UniGene:Dr.106574
Ensembl:ENSDART00000111491 Ensembl:ENSDART00000134598 GeneID:558075
KEGG:dre:558075 NextBio:20882300 Uniprot:E7FEE4
Length = 494
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 141/368 (38%), Positives = 194/368 (52%)
Query: 7 MSQKSTKHKRTASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFX 66
+ QK H + S + +N +QD + ++ + E D LP +++ L LF QIEREF
Sbjct: 14 VKQKRKSH--SLSIRRTNSTEQDRTGMQRDM-LEGQDSKLPMALRSNLLDLFGQIEREFE 70
Query: 67 XXXXXXXXXQDKIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPS-AQ 125
+ +I+ L E+L E + E D+ +K K K S +Q
Sbjct: 71 NLYIENLELRREIESLNERLSGEG----QTVEGGDL------SKGALKTKASHSTSQLSQ 120
Query: 126 KLKTTNKLKVQTSKIVSSFK--TSLLSCYKIRSFSGHRDGVWDVAVRPGQP-VLGSASAD 182
KLKTT K TSKIVSSFK TS C ++ + GHRDG+WD+AV QP VLG+ASAD
Sbjct: 121 KLKTT--YKASTSKIVSSFKATTSRAVCQLVKEYVGHRDGIWDLAVTRVQPLVLGTASAD 178
Query: 183 RTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE----- 237
LWS +TGKC+L+Y+GH+GSVNS++F P + + L+ASGD++ HIW+ ++
Sbjct: 179 HCSMLWSIETGKCLLKYAGHAGSVNSIKFHPTEQMALTASGDQTAHIWRYMVQLPLPQPP 238
Query: 238 CXXXXXXXXXXESKEPDESS---------ITLRTPVKELLGHSNVVIAADWLSDGEQVIT 288
+ + DE+ T+R L H VVIAADWL G+QV+T
Sbjct: 239 ADISASLDDDVDFSDKDEADGDADGPNECPTIRVATTTLKSHQGVVIAADWLVGGKQVVT 298
Query: 289 ASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENP- 347
ASWDR ANL+DVET ++ +LTGHD+E C V R +P
Sbjct: 299 ASWDRAANLYDVETSELVHTLTGHDQELTHCCTHPTQRLVVTS--SRDTTFRLWDFRDPS 356
Query: 348 IHSVCVFQ 355
IHSV VFQ
Sbjct: 357 IHSVNVFQ 364
>UNIPROTKB|B5DG67 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8030 "Salmo salar" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 HAMAP:MF_03029 EMBL:BT043626
ProteinModelPortal:B5DG67 Uniprot:B5DG67
Length = 423
Score = 226 (84.6 bits), Expect = 9.8e-17, P = 9.8e-17
Identities = 60/172 (34%), Positives = 88/172 (51%)
Query: 154 IRSFSGHRDGVWDVA--VRPG-QPVLGSASADRTVRLW--STQTGKCVLQYS--GHSGSV 206
+ + +GH D V DVA R G +L +AS D+T+ LW +++ K ++ GH+GSV
Sbjct: 133 VMTVAGHTDVVKDVAWVKRDGLTSLLLTASLDQTILLWEWNSERNKLKARHCCRGHAGSV 192
Query: 207 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKE 266
+++ P + S S DK + IW AV E K+ E RTP+
Sbjct: 193 DTIATDPTRTKFCSGSWDKMLKIWSAVATEEEEEEEEPPSRPRKKQKTEQLGLTRTPLMT 252
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI 318
L GH+ V + WL D E++ +ASWD L+D ETG++ SLTG HI
Sbjct: 253 LSGHNEAVSSVLWL-DSEEICSASWDHTIRLWDAETGSVKTSLTGSKVFNHI 303
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 196 (74.1 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 49/165 (29%), Positives = 81/165 (49%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 17 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 74
Query: 214 NKD--LVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEPDESSITLRTPVKELL 268
N+D L+ S S D++V +W V EC S P+ S ++ +
Sbjct: 75 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSSISEATGSEV 133
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
GH N V + S G+ +++ + D+ ++D + +++L H+
Sbjct: 134 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE 178
Score = 127 (49.8 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 180 SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231
SAD T++LW Q +C+ GH +V+SV +PN D ++SAS DK++ +W+
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 52
Score = 120 (47.3 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 42/202 (20%), Positives = 84/202 (41%)
Query: 103 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 162
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 15 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 67
Query: 163 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 218
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 68 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 125
Query: 219 LSASGDKSVHI-WQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVVIAA 277
A+G + H W + + + K + +K L H + V +
Sbjct: 126 SEATGSEVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 184
Query: 278 DWLSDGEQVITASWDRVANLFD 299
D+ V+T S D+ +++
Sbjct: 185 DFHKTAPYVVTGSVDQTVKVWE 206
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 196 (74.1 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 49/165 (29%), Positives = 81/165 (49%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 14 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 71
Query: 214 NKD--LVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEPDESSITLRTPVKELL 268
N+D L+ S S D++V +W V EC S P+ S ++ +
Sbjct: 72 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYSSISEATGSEV 130
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
GH N V + S G+ +++ + D+ ++D + +++L H+
Sbjct: 131 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE 175
Score = 120 (47.3 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 42/202 (20%), Positives = 84/202 (41%)
Query: 103 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 162
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 12 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 64
Query: 163 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 218
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 65 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 122
Query: 219 LSASGDKSVHI-WQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVVIAA 277
A+G + H W + + + K + +K L H + V +
Sbjct: 123 SEATGSEVGHDNWVRGVLFH-SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 181
Query: 278 DWLSDGEQVITASWDRVANLFD 299
D+ V+T S D+ +++
Sbjct: 182 DFHKTAPYVVTGSVDQTVKVWE 203
Score = 114 (45.2 bits), Expect = 0.00017, P = 0.00017
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 184 TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231
T++LW Q +C+ GH +V+SV +PN D ++SAS DK++ +W+
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 49
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 212 (79.7 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 61/183 (33%), Positives = 93/183 (50%)
Query: 154 IRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTGKCVLQYS--GHSGSV 206
I + +GH + V DV V+ +L SAS D+T++LW +T+ K + GH+GSV
Sbjct: 133 IMTITGHTEAVKDVTWVKKDSLSCLLLSASIDQTIQLWEWNTERNKIKALHCCRGHAGSV 192
Query: 207 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKE 266
+S+ ++ S S DK + IW AV + E K+ E R P+
Sbjct: 193 DSIAVDASRTKFCSGSWDKMLKIWSAVPSEEEDEYEETSDRPRKKQKTEKMGLTRIPIVT 252
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
L GHS V + W SD +++ +ASWD ++DVETGT+ +L G+ C+S YS
Sbjct: 253 LSGHSEAVSSVLW-SDVDEICSASWDHNIKIWDVETGTVKSTLAGNKV---FNCIS--YS 306
Query: 327 KVS 329
+S
Sbjct: 307 PLS 309
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 208 (78.3 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 84/287 (29%), Positives = 127/287 (44%)
Query: 39 SEYDDV--VLPSSVKFKLNSLFSQIEREFXXXXXXXXXXQDKIDMLMEKLDRESIIN--- 93
SE D+ ++ +K K N +E +F DK M ME + E ++
Sbjct: 28 SEIADLSNIINKLLKDK-NEFHKHVEFDFLIKGQFLRMPLDK-HMEMENISSEEVVEIEY 85
Query: 94 -EKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCY 152
EKY +C+ F+ + +S A++ T +TS+I S L
Sbjct: 86 VEKYTAPQPEQCM------FHDDWI-SSIKGAEEWILTGSYD-KTSRIWS------LEGK 131
Query: 153 KIRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTGKCVLQYS--GHSGS 205
I + GH D V DVA V+ +L SAS D+T+ LW + + K + GH+GS
Sbjct: 132 SIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGS 191
Query: 206 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVK 265
V+S+ + S S DK + IW V E K+ E RTPV
Sbjct: 192 VDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPVV 251
Query: 266 ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
L GH V + W SD E++ +ASWD ++DVE+G++ +LTG+
Sbjct: 252 TLSGHMEAVSSVLW-SDAEEICSASWDHTIRVWDVESGSLKSTLTGN 297
>ZFIN|ZDB-GENE-030131-371 [details] [associations]
symbol:wdr12 "WD repeat domain 12" species:7955
"Danio rerio" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
[GO:0070545 "PeBoW complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-371 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 HSSP:P16649 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC044198 EMBL:BC067331
EMBL:BC155268 IPI:IPI00501657 RefSeq:NP_955851.1 UniGene:Dr.76721
ProteinModelPortal:Q6NX08 STRING:Q6NX08 PRIDE:Q6NX08 DNASU:321652
Ensembl:ENSDART00000012903 GeneID:321652 KEGG:dre:321652
InParanoid:Q6NX08 NextBio:20807472 Bgee:Q6NX08 Uniprot:Q6NX08
Length = 422
Score = 207 (77.9 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 55/165 (33%), Positives = 88/165 (53%)
Query: 154 IRSFSGHRDGVWDVA--VRPG-QPVLGSASADRTVRLW--STQTGKCVLQYS--GHSGSV 206
+ + +GH D V DVA R G VL +AS D+TV LW +++ K ++ GH+GSV
Sbjct: 133 VMTVAGHADVVKDVAWVKRDGLNSVLLTASLDQTVMLWEWNSERNKVKARHCCRGHAGSV 192
Query: 207 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKE 266
+++ P + S S DK + IW AV E + ++ ++ +T RTP+
Sbjct: 193 DTIAVDPTRTKFCSGSWDKMLKIWSAVPTEEEDEIEEPNRPRKKQKTEQMGLT-RTPLMT 251
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG 311
L GH+ V + W+ D +++ +ASWD L+D ETG +L+G
Sbjct: 252 LSGHNEAVSSVLWM-DADELCSASWDHTIRLWDAETGGQKSTLSG 295
Score = 94 (38.1 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL-- 217
H D W +V + + S D+T R+WS + GK V+ +GH+ V V ++ L
Sbjct: 100 HDD--WISSVEADSEWILTGSYDKTARIWSME-GKAVMTVAGHADVVKDVAWVKRDGLNS 156
Query: 218 -VLSASGDKSVHIWQ 231
+L+AS D++V +W+
Sbjct: 157 VLLTASLDQTVMLWE 171
Score = 62 (26.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 267 LLGHSNVVIAADWLSDGE-QVITASWDRVANLFDVETGTI-LQSLTGHDEEPHILC 320
L H+ V A W E Q+++ S D V L+D + L L H+++ +LC
Sbjct: 337 LTSHNGWVTAVRWAPSHEHQLVSGSLDNVVKLWDTRSCKAPLYDLAAHEDK--VLC 390
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 207 (77.9 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 83/287 (28%), Positives = 127/287 (44%)
Query: 39 SEYDDV--VLPSSVKFKLNSLFSQIEREFXXXXXXXXXXQDKIDMLMEKLDRESIIN--- 93
SE D+ ++ +K K N +E +F DK M ME + E ++
Sbjct: 28 SEIADLSNIINKLLKDK-NEFHKHVEFDFLIKGQFLRMPLDK-HMEMENISSEEVVEIEY 85
Query: 94 -EKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCY 152
EKY +C+ F+ + +S A++ T +TS+I S L
Sbjct: 86 VEKYTAPQPEQCM------FHDDWI-SSIKGAEEWILTGSYD-KTSRIWS------LEGK 131
Query: 153 KIRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTGKCVLQYS--GHSGS 205
I + GH D V DVA V+ +L SAS D+T+ LW + + K + GH+GS
Sbjct: 132 SIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGS 191
Query: 206 VNSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVK 265
V+S+ + S S DK + IW V E K+ E RTP+
Sbjct: 192 VDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIV 251
Query: 266 ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
L GH V + W SD E++ +ASWD ++DVE+G++ +LTG+
Sbjct: 252 TLSGHMEAVSSVLW-SDAEEICSASWDHTIRVWDVESGSLKSTLTGN 297
>UNIPROTKB|F1P2Y8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0070545 "PeBoW complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:AADN02019869 IPI:IPI00587836
Ensembl:ENSGALT00000013803 Uniprot:F1P2Y8
Length = 411
Score = 204 (76.9 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 57/166 (34%), Positives = 82/166 (49%)
Query: 154 IRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLWSTQTGKCVLQY----SGHSGSV 206
I + +GH + V DVA V+ +L SAS D+T+ LW K ++ GH+GSV
Sbjct: 121 IMTIAGHTEVVKDVAWVKQDSLSCLLISASMDQTILLWEWNVEKNKVKALHCCRGHAGSV 180
Query: 207 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKE 266
+SV + S S DK + IW AV E K+ E RTP+
Sbjct: 181 DSVAVDCTRTKFCSGSWDKMLKIWSAVPTDEEDEMEEAANRPRKKQKTEQLGLTRTPLAT 240
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
L GH+ + + W SD E++ +ASWD L+D ETG + +LTG+
Sbjct: 241 LSGHTEAISSVLW-SDAEEICSASWDHTIKLWDAETGGLKSTLTGN 285
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 201 (75.8 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 71/241 (29%), Positives = 113/241 (46%)
Query: 82 LMEKLDRESIINEKYPECNDMECVTNMNKN---FNKQKVLASNPSAQKLKTTNKLKVQTS 138
L + ++ E+I +E+ E +E T F+ + A + + + T + K TS
Sbjct: 66 LFKHMELENISSEEVVELEYVEKYTAPQPEQCMFHDDWISAIEGAEEWILTGSYDK--TS 123
Query: 139 KIVSSFKTSLLSCYKIRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTG 193
+I SS S+++ GH D V DVA V+ +L SAS D+T+ LW + +
Sbjct: 124 RIWSSEGKSIMTIV------GHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERN 177
Query: 194 KCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESK 251
K + GH+GSV+S+ S S DK + IW V E K
Sbjct: 178 KVKALHCCRGHAGSVDSIAVDSTGTRFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKK 237
Query: 252 EPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG 311
+ E RTP+ L GH + + W SD E++ +ASWD ++DVE+G++ +LTG
Sbjct: 238 QKTEQLGLTRTPIVTLSGHKEAISSVLW-SDAEEICSASWDHTIGVWDVESGSLKSTLTG 296
Query: 312 H 312
+
Sbjct: 297 N 297
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 198 (74.8 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 55/166 (33%), Positives = 81/166 (48%)
Query: 154 IRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTGKCVLQYS--GHSGSV 206
I + GH D V DVA V+ +L SAS D+T+ LW + + K + GH+GSV
Sbjct: 133 IMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSV 192
Query: 207 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKE 266
+S+ S S DK + IW V E K+ E RTP+
Sbjct: 193 DSIAVDSTGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVT 252
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
L GH + + W SD E++ +ASWD ++DVE+G++ +LTG+
Sbjct: 253 LSGHKEAISSVLW-SDAEEICSASWDHTIKVWDVESGSLKSTLTGN 297
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 197 (74.4 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 55/166 (33%), Positives = 82/166 (49%)
Query: 154 IRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTGKCVLQYS--GHSGSV 206
I + GH D V DVA V+ +L S+S D+T+ LW + + K + GH+GSV
Sbjct: 133 IMTIVGHTDVVKDVAWVKKDNLSCLLLSSSMDQTILLWEWNVERNKVKALHCCRGHAGSV 192
Query: 207 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKE 266
+S+ S S DK + IW AV E K+ E RTP+
Sbjct: 193 DSIAVDSTGTKFCSGSWDKMLKIWSAVPTDEEDELEEPTNRPRKKQKTEQLGLTRTPIVT 252
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
L GH + + W SD E++ +ASWD ++DVE+G++ +LTG+
Sbjct: 253 LSGHKEAISSVLW-SDAEEICSASWDHTIRVWDVESGSLKSTLTGN 297
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 191 (72.3 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 55/165 (33%), Positives = 78/165 (47%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 120 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 177
Query: 214 NKD--LVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEPDESSITLRTPVKELL 268
N+D L+ S S D++V +W V EC S P ESS + + E
Sbjct: 178 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAP-ESSYS---SISEAT 232
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
G G +++ S D+ ++DV TG L +L GHD
Sbjct: 233 GSETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 273
Score = 165 (63.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 79 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 138
Query: 215 KDLVLSASGDKSVHIWQ 231
D ++SAS DK++ +W+
Sbjct: 139 GDHIVSASRDKTIKMWE 155
Score = 124 (48.7 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 28/83 (33%), Positives = 42/83 (50%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 38 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 97
Query: 216 DLVLSASGDKSVHIWQAVINWEC 238
L+ S S D ++ +W +EC
Sbjct: 98 KLLASCSADMTIKLWDFQ-GFEC 119
Score = 122 (48.0 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 241 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 299
Query: 230 W 230
W
Sbjct: 300 W 300
Score = 110 (43.8 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 103 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 162
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 118 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 170
Query: 163 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 218
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 171 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 228
Query: 219 LSASGDKS 226
A+G ++
Sbjct: 229 SEATGSET 236
Score = 86 (35.3 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 14/51 (27%), Positives = 33/51 (64%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ TGH E
Sbjct: 120 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 170
Score = 56 (24.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
L+GH N V + S G+ +++ + D+ ++D + +++L H+
Sbjct: 269 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE 315
Score = 42 (19.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
+K L H + V + D+ V+T S D+ +++
Sbjct: 308 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 159 (61.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
++ SGH+ G+ DVA +L SAS D+T+++W +GKC+ GHS V F P
Sbjct: 55 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 114
Query: 215 KDLVLSASGDKSVHIW 230
+L++S S D+SV IW
Sbjct: 115 SNLIVSGSFDESVRIW 130
Score = 158 (60.7 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 47/177 (26%), Positives = 79/177 (44%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ +GH V V P L S+SAD+ +++W GK SGH ++ V + +
Sbjct: 14 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 73
Query: 216 DLVLSASGDKSVHIWQAVI-----------NWE-CXXXXXXXXXXESKEPDES----SIT 259
+L++SAS DK++ IW N+ C S DES +
Sbjct: 74 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 133
Query: 260 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEP 316
+K L HS+ V A + DG ++++S+D + ++D +G L++L D P
Sbjct: 134 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 190
Score = 125 (49.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 26/85 (30%), Positives = 45/85 (52%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+++ GH + V+ P ++ S S D +VR+W +TGKC+ HS V++V F
Sbjct: 96 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 155
Query: 214 NKDLVLSASGDKSVHIWQAVINWEC 238
+ L++S+S D IW + +C
Sbjct: 156 DGSLIVSSSYDGLCRIWDTA-SGQC 179
Score = 92 (37.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFL 212
+++ H D V V ++ S+S D R+W T +G+C+ + V+ V+F
Sbjct: 138 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 197
Query: 213 PNKDLVLSASGDKSVHIW 230
PN +L+A+ D ++ +W
Sbjct: 198 PNGKYILAATLDNTLKLW 215
Score = 70 (29.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 16/64 (25%), Positives = 33/64 (51%)
Query: 264 VKELLGHSNVVIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
+K L+ N ++ + +G+ ++ A+ D L+D G L++ TGH E + C+
Sbjct: 180 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY--CIF 237
Query: 323 SYYS 326
+ +S
Sbjct: 238 ANFS 241
Score = 65 (27.9 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 15/54 (27%), Positives = 32/54 (59%)
Query: 264 VKELLGHSN--VVIAADW-LSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
+K GH N I A++ ++ G+ +++ S D + +++++T I+Q L GH +
Sbjct: 223 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 276
Score = 37 (18.1 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 264 VKELLGHSNVVIA 276
V++L GH++VVI+
Sbjct: 268 VQKLQGHTDVVIS 280
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 192 (72.6 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 53/165 (32%), Positives = 77/165 (46%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 214 NKD--LVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEPDESSITLRTPVKELL 268
N+D L+ S S D++V +W V EC S P+ S T + E
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESSYST----ISEAT 297
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
G G +++ S D+ ++D+ TG L +L GHD
Sbjct: 298 GSETKKSG----KPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHD 338
Score = 163 (62.4 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 215 KDLVLSASGDKSVHIWQ 231
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 123 (48.4 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 28/83 (33%), Positives = 41/83 (49%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTG 162
Query: 216 DLVLSASGDKSVHIWQAVINWEC 238
L+ S S D ++ +W +EC
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFEC 184
Score = 121 (47.7 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 230 W 230
W
Sbjct: 365 W 365
Score = 110 (43.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 103 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 162
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 163 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 218
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTI 293
Query: 219 LSASGDKS 226
A+G ++
Sbjct: 294 SEATGSET 301
Score = 86 (35.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 14/51 (27%), Positives = 33/51 (64%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ TGH E
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 56 (24.8 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
L+GH N V + S G+ +++ + D+ ++D + +++L H+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHE 380
Score = 42 (19.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 159 (61.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R+ GH++G+ D+A ++ SAS D+T+++W ++GK V GH V V F P
Sbjct: 82 RTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQ 141
Query: 215 KDLVLSASGDKSVHIWQAVINWEC 238
+L++S S D++V IW V EC
Sbjct: 142 SNLIVSGSFDENVRIWD-VNTGEC 164
Score = 143 (55.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+++ GH++ V+ V+ P ++ S S D VR+W TG+C S HS V V F
Sbjct: 123 VKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNR 182
Query: 214 NKDLVLSASGDKSVHIW 230
+ LV+S S D +V IW
Sbjct: 183 DGTLVVSGSYDGTVRIW 199
Score = 143 (55.4 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 42/174 (24%), Positives = 71/174 (40%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ GH + V P L SASAD+T+++W GK GH ++ + + +
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDS 100
Query: 216 DLVLSASGDKSVHIWQAVINW--ECXXXXXXXXXXESKEP----------DES----SIT 259
L+ SAS DK++ IW + S P DE+ +
Sbjct: 101 KLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVN 160
Query: 260 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
K + HS+ V + DG V++ S+D ++D TG +L +++ D
Sbjct: 161 TGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTED 214
Score = 114 (45.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS-VNSV 209
C K+ S H D V V ++ S S D TVR+W T TG+ + S G V+ V
Sbjct: 164 CTKM--ISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFV 221
Query: 210 RFLPNKDLVLSASGDKSVHIWQAVINWEC 238
+F PN VL+ + D ++ +W N +C
Sbjct: 222 KFSPNGKFVLAGTLDNTLRLWSYNNNKKC 250
Score = 114 (45.2 bits), Expect = 0.00062, P = 0.00062
Identities = 36/142 (25%), Positives = 62/142 (43%)
Query: 191 QTGKCVLQYS--GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA-------VINWECXXX 241
QT +L+Y+ GH S++SV+F P+ + SAS DK++ IW A +
Sbjct: 32 QTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGI 91
Query: 242 XXXXXXXESK----EPDESSITL-----RTPVKELLGHSNVVIAADWLSDGEQVITASWD 292
+SK D+ +I + VK L GH V + +++ S+D
Sbjct: 92 SDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFD 151
Query: 293 RVANLFDVETGTILQSLTGHDE 314
++DV TG + ++ H +
Sbjct: 152 ENVRIWDVNTGECTKMISAHSD 173
Score = 71 (30.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 14/54 (25%), Positives = 32/54 (59%)
Query: 264 VKELLGHSN---VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
+K GH N + + ++ G+ ++T S D + +++++T I+Q+L GH++
Sbjct: 251 LKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHED 304
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 191 (72.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 55/165 (33%), Positives = 78/165 (47%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 214 NKD--LVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEPDESSITLRTPVKELL 268
N+D L+ S S D++V +W V EC S P ESS + + E
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAP-ESSYS---SISEAT 297
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
G G +++ S D+ ++DV TG L +L GHD
Sbjct: 298 GSETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Score = 165 (63.1 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 215 KDLVLSASGDKSVHIWQ 231
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 124 (48.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 28/83 (33%), Positives = 42/83 (50%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 216 DLVLSASGDKSVHIWQAVINWEC 238
L+ S S D ++ +W +EC
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFEC 184
Score = 122 (48.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 230 W 230
W
Sbjct: 365 W 365
Score = 110 (43.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 103 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 162
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 163 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 218
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 219 LSASGDKS 226
A+G ++
Sbjct: 294 SEATGSET 301
Score = 86 (35.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 14/51 (27%), Positives = 33/51 (64%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ TGH E
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 56 (24.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
L+GH N V + S G+ +++ + D+ ++D + +++L H+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE 380
Score = 42 (19.8 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 191 (72.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 55/165 (33%), Positives = 78/165 (47%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 214 NKD--LVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEPDESSITLRTPVKELL 268
N+D L+ S S D++V +W V EC S P ESS + + E
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAP-ESSYS---SISEAT 297
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
G G +++ S D+ ++DV TG L +L GHD
Sbjct: 298 GSETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Score = 165 (63.1 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 215 KDLVLSASGDKSVHIWQ 231
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 124 (48.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 28/83 (33%), Positives = 42/83 (50%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 216 DLVLSASGDKSVHIWQAVINWEC 238
L+ S S D ++ +W +EC
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFEC 184
Score = 122 (48.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 230 W 230
W
Sbjct: 365 W 365
Score = 110 (43.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 103 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 162
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 163 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 218
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 219 LSASGDKS 226
A+G ++
Sbjct: 294 SEATGSET 301
Score = 86 (35.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 14/51 (27%), Positives = 33/51 (64%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ TGH E
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 56 (24.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
L+GH N V + S G+ +++ + D+ ++D + +++L H+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE 380
Score = 42 (19.8 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 191 (72.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 55/165 (33%), Positives = 78/165 (47%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 214 NKD--LVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEPDESSITLRTPVKELL 268
N+D L+ S S D++V +W V EC S P ESS + + E
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAP-ESSYS---SISEAT 297
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
G G +++ S D+ ++DV TG L +L GHD
Sbjct: 298 GSETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Score = 165 (63.1 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 215 KDLVLSASGDKSVHIWQ 231
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 124 (48.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 28/83 (33%), Positives = 42/83 (50%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 216 DLVLSASGDKSVHIWQAVINWEC 238
L+ S S D ++ +W +EC
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFEC 184
Score = 122 (48.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 230 W 230
W
Sbjct: 365 W 365
Score = 110 (43.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 103 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 162
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 163 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 218
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 219 LSASGDKS 226
A+G ++
Sbjct: 294 SEATGSET 301
Score = 86 (35.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 14/51 (27%), Positives = 33/51 (64%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ TGH E
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 56 (24.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
L+GH N V + S G+ +++ + D+ ++D + +++L H+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE 380
Score = 42 (19.8 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 191 (72.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 55/165 (33%), Positives = 78/165 (47%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 214 NKD--LVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEPDESSITLRTPVKELL 268
N+D L+ S S D++V +W V EC S P ESS + + E
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAP-ESSYS---SISEAT 297
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
G G +++ S D+ ++DV TG L +L GHD
Sbjct: 298 GSETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Score = 165 (63.1 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 215 KDLVLSASGDKSVHIWQ 231
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 124 (48.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 28/83 (33%), Positives = 42/83 (50%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 216 DLVLSASGDKSVHIWQAVINWEC 238
L+ S S D ++ +W +EC
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFEC 184
Score = 122 (48.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 230 W 230
W
Sbjct: 365 W 365
Score = 110 (43.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 103 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 162
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 163 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 218
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 219 LSASGDKS 226
A+G ++
Sbjct: 294 SEATGSET 301
Score = 86 (35.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 14/51 (27%), Positives = 33/51 (64%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ TGH E
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 56 (24.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
L+GH N V + S G+ +++ + D+ ++D + +++L H+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE 380
Score = 42 (19.8 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 191 (72.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 55/165 (33%), Positives = 78/165 (47%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 214 NKD--LVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEPDESSITLRTPVKELL 268
N+D L+ S S D++V +W V EC S P ESS + + E
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAP-ESSYS---SISEAT 297
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
G G +++ S D+ ++DV TG L +L GHD
Sbjct: 298 GSETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Score = 165 (63.1 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 215 KDLVLSASGDKSVHIWQ 231
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 124 (48.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 28/83 (33%), Positives = 42/83 (50%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 216 DLVLSASGDKSVHIWQAVINWEC 238
L+ S S D ++ +W +EC
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFEC 184
Score = 122 (48.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 230 W 230
W
Sbjct: 365 W 365
Score = 110 (43.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 103 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 162
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 163 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 218
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 219 LSASGDKS 226
A+G ++
Sbjct: 294 SEATGSET 301
Score = 86 (35.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 14/51 (27%), Positives = 33/51 (64%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ TGH E
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 56 (24.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
L+GH N V + S G+ +++ + D+ ++D + +++L H+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE 380
Score = 42 (19.8 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 191 (72.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 55/165 (33%), Positives = 78/165 (47%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 214 NKD--LVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEPDESSITLRTPVKELL 268
N+D L+ S S D++V +W V EC S P ESS + + E
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAP-ESSYS---SISEAT 297
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
G G +++ S D+ ++DV TG L +L GHD
Sbjct: 298 GSETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Score = 165 (63.1 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 215 KDLVLSASGDKSVHIWQ 231
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 124 (48.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 28/83 (33%), Positives = 42/83 (50%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 216 DLVLSASGDKSVHIWQAVINWEC 238
L+ S S D ++ +W +EC
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFEC 184
Score = 122 (48.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 230 W 230
W
Sbjct: 365 W 365
Score = 110 (43.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 103 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 162
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 163 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 218
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 219 LSASGDKS 226
A+G ++
Sbjct: 294 SEATGSET 301
Score = 86 (35.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 14/51 (27%), Positives = 33/51 (64%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ TGH E
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 56 (24.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
L+GH N V + S G+ +++ + D+ ++D + +++L H+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE 380
Score = 42 (19.8 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 191 (72.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 55/165 (33%), Positives = 78/165 (47%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 214 NKD--LVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEPDESSITLRTPVKELL 268
N+D L+ S S D++V +W V EC S P ESS + + E
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAP-ESSYS---SISEAT 297
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
G G +++ S D+ ++DV TG L +L GHD
Sbjct: 298 GSETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Score = 165 (63.1 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 215 KDLVLSASGDKSVHIWQ 231
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 124 (48.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 28/83 (33%), Positives = 42/83 (50%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 216 DLVLSASGDKSVHIWQAVINWEC 238
L+ S S D ++ +W +EC
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFEC 184
Score = 122 (48.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 230 W 230
W
Sbjct: 365 W 365
Score = 110 (43.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 103 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 162
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 163 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 218
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 219 LSASGDKS 226
A+G ++
Sbjct: 294 SEATGSET 301
Score = 86 (35.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 14/51 (27%), Positives = 33/51 (64%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ TGH E
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 56 (24.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
L+GH N V + S G+ +++ + D+ ++D + +++L H+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE 380
Score = 42 (19.8 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 191 (72.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 55/165 (33%), Positives = 78/165 (47%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 214 NKD--LVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEPDESSITLRTPVKELL 268
N+D L+ S S D++V +W V EC S P ESS + + E
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAP-ESSYS---SISEAT 297
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
G G +++ S D+ ++DV TG L +L GHD
Sbjct: 298 GSETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Score = 165 (63.1 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 215 KDLVLSASGDKSVHIWQ 231
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 124 (48.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 28/83 (33%), Positives = 42/83 (50%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 216 DLVLSASGDKSVHIWQAVINWEC 238
L+ S S D ++ +W +EC
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFEC 184
Score = 122 (48.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 230 W 230
W
Sbjct: 365 W 365
Score = 110 (43.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 103 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 162
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 163 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 218
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 219 LSASGDKS 226
A+G ++
Sbjct: 294 SEATGSET 301
Score = 86 (35.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 14/51 (27%), Positives = 33/51 (64%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ TGH E
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 56 (24.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
L+GH N V + S G+ +++ + D+ ++D + +++L H+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE 380
Score = 42 (19.8 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 191 (72.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 55/165 (33%), Positives = 78/165 (47%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR+ GH V VA+ P + SAS D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 214 NKD--LVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEPDESSITLRTPVKELL 268
N+D L+ S S D++V +W V EC S P ESS + + E
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAP-ESSYS---SISEAT 297
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
G G +++ S D+ ++DV TG L +L GHD
Sbjct: 298 GSETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Score = 164 (62.8 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 215 KDLVLSASGDKSVHIWQ 231
D ++SAS DK++ +W+
Sbjct: 204 GDHIVSASRDKTIKMWE 220
Score = 124 (48.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 28/83 (33%), Positives = 42/83 (50%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSG 162
Query: 216 DLVLSASGDKSVHIWQAVINWEC 238
L+ S S D ++ +W +EC
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFEC 184
Score = 122 (48.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 230 W 230
W
Sbjct: 365 W 365
Score = 110 (43.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 30/128 (23%), Positives = 60/128 (46%)
Query: 103 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 162
EC+ M+ + + +A P+ + + ++ K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 163 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 218
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 219 LSASGDKS 226
A+G ++
Sbjct: 294 SEATGSET 301
Score = 86 (35.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 14/51 (27%), Positives = 33/51 (64%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
++ + GH + V + + +G+ +++AS D+ +++V+TG +++ TGH E
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 56 (24.8 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
L+GH N V + S G+ +++ + D+ ++D + +++L H+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE 380
Score = 42 (19.8 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 159 (61.0 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
++ SGH+ G+ DVA +L SAS D+T+++W +GKC+ GHS V F P
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 215 KDLVLSASGDKSVHIW 230
+L++S S D+SV IW
Sbjct: 141 SNLIVSGSFDESVRIW 156
Score = 158 (60.7 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 47/177 (26%), Positives = 79/177 (44%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ +GH V V P L S+SAD+ +++W GK SGH ++ V + +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 216 DLVLSASGDKSVHIWQAVI-----------NWE-CXXXXXXXXXXESKEPDES----SIT 259
+L++SAS DK++ IW N+ C S DES +
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 260 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEP 316
+K L HS+ V A + DG ++++S+D + ++D +G L++L D P
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Score = 125 (49.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 26/85 (30%), Positives = 45/85 (52%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+++ GH + V+ P ++ S S D +VR+W +TGKC+ HS V++V F
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 214 NKDLVLSASGDKSVHIWQAVINWEC 238
+ L++S+S D IW + +C
Sbjct: 182 DGSLIVSSSYDGLCRIWDTA-SGQC 205
Score = 92 (37.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFL 212
+++ H D V V ++ S+S D R+W T +G+C+ + V+ V+F
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 213 PNKDLVLSASGDKSVHIW 230
PN +L+A+ D ++ +W
Sbjct: 224 PNGKYILAATLDNTLKLW 241
Score = 70 (29.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 16/64 (25%), Positives = 33/64 (51%)
Query: 264 VKELLGHSNVVIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
+K L+ N ++ + +G+ ++ A+ D L+D G L++ TGH E + C+
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY--CIF 263
Query: 323 SYYS 326
+ +S
Sbjct: 264 ANFS 267
Score = 65 (27.9 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 15/54 (27%), Positives = 32/54 (59%)
Query: 264 VKELLGHSN--VVIAADW-LSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
+K GH N I A++ ++ G+ +++ S D + +++++T I+Q L GH +
Sbjct: 249 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 302
Score = 37 (18.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 264 VKELLGHSNVVIA 276
V++L GH++VVI+
Sbjct: 294 VQKLQGHTDVVIS 306
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 189 (71.6 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 54/166 (32%), Positives = 81/166 (48%)
Query: 154 IRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLWSTQTGKCVLQY----SGHSGSV 206
I + GH D V DVA V+ +L +AS D+TV LW K ++ GH+GSV
Sbjct: 133 IMTIVGHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNVEKNKVKALHCCRGHAGSV 192
Query: 207 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKE 266
+++ + S S DK + IW V E K+ E RTP+
Sbjct: 193 DAIAVDSSGAKFCSGSWDKMLKIWSTVPTDEEDEMEEATNRPRKKQKTEQLGLTRTPLVT 252
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
L GH+ + + W SD E++ +ASWD ++DVE+G + +LTG+
Sbjct: 253 LSGHTEAISSVLW-SDAEEICSASWDHTIRVWDVESGGLKSTLTGN 297
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 196 (74.1 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 52/176 (29%), Positives = 84/176 (47%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+++F GH +W VA P L SAS D T+++W TG+ HS SV SV F P
Sbjct: 827 LQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSP 886
Query: 214 NKDLVLSASGDKSVHIW-------QAVINWECXXXXXXXXXXESKE----PDESSITLRT 262
+ L+ S+S D ++ +W Q + + K+ +++++ L
Sbjct: 887 DGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWN 946
Query: 263 PVK-ELL----GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
P ELL GHS V + + DG+Q+ ++S D L++ TG + Q+ GHD
Sbjct: 947 PATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHD 1002
Score = 162 (62.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 47/177 (26%), Positives = 79/177 (44%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+++ GH V +A P +L S S D T+ LW + TG+ + + GH S+ SV F P
Sbjct: 785 LQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAP 844
Query: 214 NKDLVLSASGDKSVHIWQAVIN--WECXXXXXXXXXXESKEPD---------ESSITLRT 262
+ + SAS D ++ IW + + PD +S+I +
Sbjct: 845 DGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWN 904
Query: 263 PV-----KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
P + L G S V + + DG+++ + S L++ TG +LQ+L GH +
Sbjct: 905 PATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQ 961
Score = 162 (62.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 54/215 (25%), Positives = 99/215 (46%)
Query: 116 KVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPV 175
K +A +P +KL + ++ T K+ + LL ++ GH V VA P
Sbjct: 922 KSVAFSPDGKKLASGSEKN--TVKLWNPATGELL-----QTLEGHSQSVRSVAFSPDGKQ 974
Query: 176 LGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN 235
L S+S+D T++LW++ TG+ + GH + +V F P+ ++S S D ++ +W +
Sbjct: 975 LASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATS 1034
Query: 236 --WECXXXXXXXXXXESKEPDE---SSITLRTPVK-----------ELLGHSNVVIAADW 279
+ + PD+ +S +L + +K L GHS V + +
Sbjct: 1035 ELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTF 1094
Query: 280 LSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
DG+ + + S+D L++ TG + Q+LTG +
Sbjct: 1095 SPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSD 1129
Score = 152 (58.6 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 50/176 (28%), Positives = 77/176 (43%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R+ GH GV V P +L S S D T++LW+ TG+ +G S V+SV F P+
Sbjct: 1080 RTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPD 1139
Query: 215 KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESK--EPD---------ESSITLRTP 263
+ S D ++ +W + +S PD + + L P
Sbjct: 1140 GKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDP 1199
Query: 264 VK-ELL----GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
ELL GHS V + + DG+ + ++S+ L+D TG +LQ+L DE
Sbjct: 1200 ATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDE 1255
Score = 151 (58.2 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 55/208 (26%), Positives = 84/208 (40%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
++ H V VA P +L S+S D T+++W+ TG+ G SG V SV F P+
Sbjct: 870 QTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPD 929
Query: 215 KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESK--EPDE---SSITLRTPVK---- 265
+ S S +V +W S PD +S + T +K
Sbjct: 930 GKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNS 989
Query: 266 ---ELL----GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI 318
EL GH + A + DG+ +++ S D L+D+ T + QSL H H
Sbjct: 990 TTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHA 1049
Query: 319 LCVSSYYSKV-SCDLFQRIQHLDCGTSE 345
+ S ++ S L I+ D T E
Sbjct: 1050 VAFSPDDKQLASSSLDSTIKLWDSATGE 1077
Score = 140 (54.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 48/173 (27%), Positives = 79/173 (45%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
++ H V V P L S S D TV++W TG+ + GHSG+V S+ F P+
Sbjct: 744 QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPD 803
Query: 215 KDLVLSASGDKSVHIWQAVIN-----WECXXXX--XXXXXXESKE----PDESSIT---L 260
L+ S S D ++ +W + +E + KE D+S+I L
Sbjct: 804 GKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDL 863
Query: 261 RT-PVKELL-GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG 311
T +++ L HS V + + DG+ + ++S D +++ TG + QSL G
Sbjct: 864 ATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEG 916
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/80 (33%), Positives = 44/80 (55%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+++ GH D + V P +L S S D+T +LW TG+ + + GHS V SV F P
Sbjct: 1163 LQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSP 1222
Query: 214 NKDLVLSASGDKSVHIWQAV 233
+ L+ S+S +++ +W V
Sbjct: 1223 DGKLLASSSYGETIKLWDPV 1242
Score = 129 (50.5 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 53/177 (29%), Positives = 76/177 (42%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
++ +G D V VA P L S D T++LW + TG+ + GHS + SV F P+
Sbjct: 1122 QTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPD 1181
Query: 215 KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESK--EPD-----ESS----ITLRTP 263
L+ S S D++ +W ES PD SS I L P
Sbjct: 1182 GKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDP 1241
Query: 264 VK-ELLGHSN----VVIAADWLSDGEQVITASWDRV-ANLFDVETGTILQSLTGHDE 314
V ELL N + + DG ++ AS D ++D TG +LQ+L GH +
Sbjct: 1242 VTGELLQTLNDPDESAGSVAFSPDGNRL--ASVDIFDTKIWDPATGELLQALKGHSK 1296
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 188 (71.2 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 54/165 (32%), Positives = 78/165 (47%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR+ GH V VA+ P + SA+ D+T+++W QTG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVR--P 242
Query: 214 NKD--LVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEPDESSITLRTPVKELL 268
N+D L+ S S D++V +W V EC S P ESS + + E
Sbjct: 243 NQDGTLIASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAP-ESSYS---SISEAT 297
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
G G +++ S D+ ++DV TG L +L GHD
Sbjct: 298 GSETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338
Score = 162 (62.1 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 215 KDLVLSASGDKSVHIWQ 231
D ++SA+ DK++ +W+
Sbjct: 204 GDHIVSAARDKTIKMWE 220
Score = 124 (48.7 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 28/83 (33%), Positives = 42/83 (50%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F +
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG 162
Query: 216 DLVLSASGDKSVHIWQAVINWEC 238
L+ S S D ++ +W +EC
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFEC 184
Score = 122 (48.0 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229
+PG P L S S D+T+++W TG C++ GH V V F +LS + DK++ +
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 230 W 230
W
Sbjct: 365 W 365
Score = 107 (42.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 30/128 (23%), Positives = 59/128 (46%)
Query: 103 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 162
EC+ M+ + + +A P+ + + + K + ++ C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSAAR-----DKTIKMWEVQTGYC--VKTFTGHRE 235
Query: 163 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL--V 218
W VRP Q ++ S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSI 293
Query: 219 LSASGDKS 226
A+G ++
Sbjct: 294 SEATGSET 301
Score = 83 (34.3 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 13/51 (25%), Positives = 33/51 (64%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
++ + GH + V + + +G+ +++A+ D+ +++V+TG +++ TGH E
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHRE 235
Score = 56 (24.8 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 11/47 (23%), Positives = 26/47 (55%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
L+GH N V + S G+ +++ + D+ ++D + +++L H+
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE 380
Score = 42 (19.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 149 (57.5 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 32/82 (39%), Positives = 45/82 (54%)
Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210
C K+ GH + V+ V P ++ S S D T+R+W +TGKCV HS ++SV
Sbjct: 120 CLKV--LRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVH 177
Query: 211 FLPNKDLVLSASGDKSVHIWQA 232
F + L++SAS D S IW A
Sbjct: 178 FNRDGSLIVSASHDGSCKIWDA 199
Score = 124 (48.7 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 38/128 (29%), Positives = 63/128 (49%)
Query: 110 KNFNKQKVLASNPSAQK-LKTTNKLKVQTSKIVSSFKTSLL---SCYK-IRSFSGHRDGV 164
K + K L + +A +K +N + S V KT +L + Y I + GH G+
Sbjct: 31 KPYRHLKTLEGHTAAISCVKFSNDGNLLASASVD--KTMILWSATNYSLIHRYEGHSSGI 88
Query: 165 WDVAVRPGQPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSVRFLPNKDLVLSASG 223
D+A SAS D T+R+W ++ +C+ GH+ V V F P +L++S S
Sbjct: 89 SDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSF 148
Query: 224 DKSVHIWQ 231
D+++ IW+
Sbjct: 149 DETIRIWE 156
Score = 119 (46.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+++ GH + V +L SAS D+T+ LWS + +Y GHS ++ + +
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 214 NKDLVLSASGDKSVHIWQAVINWEC 238
+ SAS D ++ IW A +EC
Sbjct: 96 DSHYTCSASDDCTLRIWDARSPYEC 120
Score = 78 (32.5 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 264 VKELLGHSNVVI---AADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILC 320
+K GH+N V +A +++G+ +++ S D L+D++ ILQ L GH + ++
Sbjct: 248 LKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDA--VIS 305
Query: 321 VSSYYSKVSCDLFQRIQHLD 340
VS + V ++ HLD
Sbjct: 306 VSCH--PVQNEISSSGNHLD 323
Score = 71 (30.1 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 12/49 (24%), Positives = 27/49 (55%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+K L GH+N V ++ +++ S+D +++V+TG ++ + H
Sbjct: 121 LKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAH 169
Score = 69 (29.3 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 17/66 (25%), Positives = 35/66 (53%)
Query: 262 TPVKELLGHSNVVIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILC 320
T +K L+ + ++ A + +G+ ++ A+ D L + TG L+ TGH + + C
Sbjct: 203 TCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNK--VFC 260
Query: 321 VSSYYS 326
++S +S
Sbjct: 261 ITSAFS 266
Score = 68 (29.0 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI 318
V+ + HS + + + DG +++AS D ++D + GT L++L D+ P +
Sbjct: 163 VRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLID-DKSPAV 216
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 185 (70.2 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 52/165 (31%), Positives = 77/165 (46%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR+ GH V VA+ P + SAS D+T+++W TG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVR--P 242
Query: 214 NKD--LVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEPDESSITLRTPVKELL 268
N+D L+ S S D++V +W V EC S P+ + T + E
Sbjct: 243 NQDGTLLASCSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESAHPT----ISEAT 297
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
G N G +++ S D+ ++D+ TG L +L GHD
Sbjct: 298 GSENKKSG----KPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHD 338
Score = 163 (62.4 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 30/82 (36%), Positives = 48/82 (58%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 215 KDLVLSASGDKSVHIWQAVINW 236
D ++SAS DK++ +W+ +
Sbjct: 204 GDHIVSASRDKTMKMWEVATGY 225
Score = 127 (49.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229
+PG P L S S D+T+++W TG C++ GH V V F P V+S + DK++ I
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRI 364
Query: 230 W 230
W
Sbjct: 365 W 365
Score = 116 (45.9 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ SGHR V V P ++ SAS D T+++W + G GH+ SV + F
Sbjct: 103 ALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTG 162
Query: 216 DLVLSASGDKSVHIWQAVINWEC 238
L+ S S D ++ +W +EC
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFEC 184
Score = 112 (44.5 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 33/128 (25%), Positives = 62/128 (48%)
Query: 103 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 162
EC+ M+ + + +A P+ + + ++ K T K+ + + Y +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDK--TMKM-----WEVATGYCVKTFTGHRE 235
Query: 163 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK--DLV 218
W VRP Q +L S S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTI 293
Query: 219 LSASGDKS 226
A+G ++
Sbjct: 294 SEATGSEN 301
Score = 83 (34.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 14/51 (27%), Positives = 32/51 (62%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
++ + GH + V + + +G+ +++AS D+ +++V TG +++ TGH E
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHRE 235
Score = 54 (24.1 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
L+GH N V + G V++ + D+ ++D + +++L+ H+
Sbjct: 334 LVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHE 380
Score = 42 (19.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
+K L H + V + D+ V+T S D+ +++
Sbjct: 373 MKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 185 (70.2 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 53/166 (31%), Positives = 82/166 (49%)
Query: 154 IRSFSGHRDGVWDVA-VRPGQP--VLGSASADRTVRLW--STQTGKCVLQYS--GHSGSV 206
I + GH D V DVA V+ +L +AS D+T+ LW + + K + GH+GSV
Sbjct: 133 IMTIVGHTDVVKDVAWVKKDSLSCLLLTASMDQTILLWEWNIERNKVKALHCCRGHAGSV 192
Query: 207 NSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKE 266
+++ + S S DK + IW V E K+ E RTP+
Sbjct: 193 DAIAVDSSGTKFCSGSWDKMLKIWSTVPTDEEDEIQEPTNRPRKKQKTEQLGLTRTPLVT 252
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
L GH+ + + W SD ++V +ASWD ++DVE+G + +LTG+
Sbjct: 253 LSGHTEAISSVLW-SDADEVCSASWDHTVRVWDVESGGLKSTLTGN 297
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 159 (61.0 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
++ SGH+ G+ DVA +L SAS D+T+++W +GKC+ GHS V F P
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 215 KDLVLSASGDKSVHIW 230
+L++S S D+SV IW
Sbjct: 141 SNLIVSGSFDESVRIW 156
Score = 158 (60.7 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 47/177 (26%), Positives = 79/177 (44%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ +GH V V P L S+SAD+ +++W GK SGH ++ V + +
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 216 DLVLSASGDKSVHIWQAVI-----------NWE-CXXXXXXXXXXESKEPDES----SIT 259
+L++SAS DK++ IW N+ C S DES +
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 260 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEP 316
+K L HS+ V A + DG ++++S+D + ++D +G L++L D P
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Score = 125 (49.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 26/85 (30%), Positives = 45/85 (52%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+++ GH + V+ P ++ S S D +VR+W +TGKC+ HS V++V F
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 214 NKDLVLSASGDKSVHIWQAVINWEC 238
+ L++S+S D IW + +C
Sbjct: 182 DGSLIVSSSYDGLCRIWDTA-SGQC 205
Score = 61 (26.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 15/64 (23%), Positives = 32/64 (50%)
Query: 264 VKELLGHSNVVIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
+K L+ N ++ + +G+ ++ A+ D L+D G L++ T H E + C+
Sbjct: 206 LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKY--CIF 263
Query: 323 SYYS 326
+ +S
Sbjct: 264 ANFS 267
Score = 55 (24.4 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 8/35 (22%), Positives = 23/35 (65%)
Query: 280 LSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
++ G+ +++ S D + +++++T ++Q L GH +
Sbjct: 268 VTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTD 302
Score = 37 (18.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 264 VKELLGHSNVVIA 276
V++L GH++VVI+
Sbjct: 294 VQKLQGHTDVVIS 306
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 151 (58.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 29/85 (34%), Positives = 48/85 (56%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
++ F+GH +G+ DVA + SAS D+T++LW +TG + GH+ V F P
Sbjct: 64 VQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP 123
Query: 214 NKDLVLSASGDKSVHIWQAVINWEC 238
++++S S D++V IW V +C
Sbjct: 124 QSNMIVSGSFDETVRIWD-VTTGKC 147
Score = 124 (48.7 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I++ GH + + V P ++ S S D TVR+W TGKC+ HS V +V F
Sbjct: 106 IKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNR 165
Query: 214 NKDLVLSASGDKSVHIWQA 232
+ L++S+S D IW +
Sbjct: 166 DGSLIVSSSYDGLCRIWDS 184
Score = 114 (45.2 bits), Expect = 0.00055, P = 0.00055
Identities = 36/139 (25%), Positives = 67/139 (48%)
Query: 196 VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ----AVI-------NWE-CXXXXX 243
V +++GH ++ V F + ++SAS DK++ +W ++I N+ C
Sbjct: 64 VQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP 123
Query: 244 XXXXXESKEPDES----SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
S DE+ +T +K L HS+ V A D+ DG ++++S+D + ++D
Sbjct: 124 QSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD 183
Query: 300 VETGTILQSLTGHDEEPHI 318
TG +++L DE P +
Sbjct: 184 SGTGHCVKTLID-DENPPV 201
Score = 112 (44.5 bits), Expect = 0.00093, P = 0.00093
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 263 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
PV+E GH N + + SD +++AS D+ L+DVETG+++++L GH + CV+
Sbjct: 63 PVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTN--YAFCVN 120
Score = 104 (41.7 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 23/81 (28%), Positives = 43/81 (53%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-----GKCVLQYSGHSGSVNSV 209
++ + H V V +L SASAD+T+R ++ T + V +++GH ++ V
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 210 RFLPNKDLVLSASGDKSVHIW 230
F + ++SAS DK++ +W
Sbjct: 78 AFSSDARFIVSASDDKTLKLW 98
Score = 92 (37.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 24/81 (29%), Positives = 37/81 (45%)
Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSV 209
C K+ H D V V ++ S+S D R+W + TG CV + V+ V
Sbjct: 147 CLKV--LPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFV 204
Query: 210 RFLPNKDLVLSASGDKSVHIW 230
RF PN +L + D ++ +W
Sbjct: 205 RFSPNGKFILVGTLDNTLRLW 225
Score = 69 (29.3 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 14/54 (25%), Positives = 32/54 (59%)
Query: 264 VKELLGHSNV---VIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
+K GH N + +A +++G+++++ S D +++++ + +LQ L GH E
Sbjct: 233 LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTE 286
Score = 63 (27.2 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 16/64 (25%), Positives = 33/64 (51%)
Query: 264 VKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
VK L+ N ++ S +G+ ++ + D L+++ + L++ TGH + C+S
Sbjct: 190 VKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQY--CIS 247
Query: 323 SYYS 326
S +S
Sbjct: 248 SAFS 251
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 154 (59.3 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 34/84 (40%), Positives = 46/84 (54%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
+SF GH V DV + SAS DRT+RLW +TG+ ++ GH G V SV N
Sbjct: 60 KSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKN 119
Query: 215 KDLVLSASGDKSVHIWQAVINWEC 238
++SAS DK+V +W + EC
Sbjct: 120 LRQIVSASRDKTVKVWNTI--GEC 141
Score = 132 (51.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN-- 214
F GH+ V V++ + SAS D+TV++W+T G+C+ +GH+ V++VR P+
Sbjct: 104 FVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNT-IGECMATLTGHNDWVSAVRISPSDQ 162
Query: 215 KDLVLSASGDKSVHIW 230
V+SAS DK+V W
Sbjct: 163 SSTVISASWDKTVKSW 178
Score = 111 (44.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 24/60 (40%), Positives = 33/60 (55%)
Query: 263 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
P K GHS++V +DG ++ASWDR L+D+ETG Q GH + +L VS
Sbjct: 58 PKKSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGD--VLSVS 115
Score = 63 (27.2 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 267 LLGHSNVVIAADWLSDGEQ---VITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
L GH++ V A +S +Q VI+ASWD+ +D+ ++ GH +I C++
Sbjct: 145 LTGHNDWVSAVR-ISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTG--YISCIT 200
Score = 61 (26.5 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 201 GHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQ 231
GH+G V S+ P + DL+LS S DK++ W+
Sbjct: 15 GHNGWVTSLATTPAHPDLLLSGSRDKTLIKWK 46
Score = 48 (22.0 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 266 ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
+ +GH+ + DG +A D V L+D+ L +L E H L S
Sbjct: 188 DFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAK-AEVHALAFS 243
Score = 41 (19.5 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 275 IAADWLSDGEQVITASWDRVANLFDVET 302
I+ W +DG+ + D V ++ V T
Sbjct: 287 ISLAWSADGQNLFAGYTDNVIRVWQVMT 314
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 154 (59.3 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 34/84 (40%), Positives = 46/84 (54%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
+SF GH V DV + SAS DRT+RLW +TG+ ++ GH G V SV N
Sbjct: 60 KSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKN 119
Query: 215 KDLVLSASGDKSVHIWQAVINWEC 238
++SAS DK+V +W + EC
Sbjct: 120 LRQIVSASRDKTVKVWNTI--GEC 141
Score = 132 (51.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN-- 214
F GH+ V V++ + SAS D+TV++W+T G+C+ +GH+ V++VR P+
Sbjct: 104 FVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNT-IGECMATLTGHNDWVSAVRISPSDQ 162
Query: 215 KDLVLSASGDKSVHIW 230
V+SAS DK+V W
Sbjct: 163 SSTVISASWDKTVKSW 178
Score = 111 (44.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 24/60 (40%), Positives = 33/60 (55%)
Query: 263 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
P K GHS++V +DG ++ASWDR L+D+ETG Q GH + +L VS
Sbjct: 58 PKKSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGD--VLSVS 115
Score = 63 (27.2 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 267 LLGHSNVVIAADWLSDGEQ---VITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
L GH++ V A +S +Q VI+ASWD+ +D+ ++ GH +I C++
Sbjct: 145 LTGHNDWVSAVR-ISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTG--YISCIT 200
Score = 61 (26.5 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 201 GHSGSVNSVRFLP-NKDLVLSASGDKSVHIWQ 231
GH+G V S+ P + DL+LS S DK++ W+
Sbjct: 15 GHNGWVTSLATTPAHPDLLLSGSRDKTLIKWK 46
Score = 48 (22.0 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 266 ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
+ +GH+ + DG +A D V L+D+ L +L E H L S
Sbjct: 188 DFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAK-AEVHALAFS 243
Score = 41 (19.5 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 275 IAADWLSDGEQVITASWDRVANLFDVET 302
I+ W +DG+ + D V ++ V T
Sbjct: 287 ISLAWSADGQNLFAGYTDNVIRVWQVMT 314
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 162 (62.1 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 33/83 (39%), Positives = 48/83 (57%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSVRFLP 213
RS GH D V DVA +L S SAD +++LW Q +C+ GH +V+SV F+P
Sbjct: 144 RSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVP 203
Query: 214 NKDLVLSASGDKSVHIWQAVINW 236
D VLSAS D+++ +W+ +
Sbjct: 204 AGDYVLSASRDRTIKMWEVATGY 226
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 43/163 (26%), Positives = 71/163 (43%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I++ GH V VA P + SAS DRT+++W TG CV Y+GH V VR
Sbjct: 186 IKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHI 245
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEPDESSITLRTPVKELLGH 270
+ + S D+++ +W + +C + P+ ++ + + E G
Sbjct: 246 EGSIFATCSNDQTIRVW-LTNSKDCKVELRDHEHTVECIAWAPEAAA----SAINEAAGA 300
Query: 271 SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
N G + + S D+ ++DV G L +L+GHD
Sbjct: 301 DN----KKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHD 339
Score = 137 (53.3 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 29/83 (34%), Positives = 43/83 (51%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
S +GHR + V P ++ SAS D T+R+W +TG+ GH+ SV V F
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQG 162
Query: 216 DLVLSASGDKSVHIWQAVINWEC 238
L+ S S D S+ +W ++EC
Sbjct: 163 KLLASCSADLSIKLWDFQQSYEC 185
Score = 135 (52.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 174 PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 233
P L S S D+T+R+W G C+L SGH V + F P ++SAS DK++ +W +
Sbjct: 310 PFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWD-L 368
Query: 234 INWEC 238
N C
Sbjct: 369 RNKRC 373
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 139 KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ 198
K + + S+ C + + SGH + V +A PG L SAS D+T+R+W + +C+
Sbjct: 319 KTIRIWDVSVGLC--LLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKT 376
Query: 199 YSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231
H S+ F V+S S D++V +W+
Sbjct: 377 LYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
Score = 87 (35.7 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
+K + GH + V + ++ G+ V++AS DR +++V TG +++ TGH E
Sbjct: 186 IKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHRE 236
Score = 55 (24.4 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
L GH N V + G+ +++AS D+ ++D+ +++L H H C S +
Sbjct: 335 LSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQ---HF-CTSIDFH 390
Query: 327 K 327
K
Sbjct: 391 K 391
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 139 (54.0 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 36/118 (30%), Positives = 56/118 (47%)
Query: 120 SNPSAQKLKTTNKLKVQTSKIVSSFKTS----LLSCYKIRSFSGHRDGVWDVAVRPGQPV 175
S P+ KLKT IV + T + K +S +GH + DV++
Sbjct: 28 STPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAK-KSLTGHSQAINDVSISSDGLF 86
Query: 176 LGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 233
S S D +VRLW G+ + + GH+ V SV F P+ ++SAS DK++ +W +
Sbjct: 87 ALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTL 144
Score = 78 (32.5 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 28/79 (35%), Positives = 38/79 (48%)
Query: 265 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL-TGHDEEPHILCVS- 322
K L GH+ V+ DG + D VA L+DV+ G L SL TG + LC S
Sbjct: 195 KNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG--STINSLCFSP 252
Query: 323 -SYYSKVSCDLFQRIQHLD 340
Y+ + D F RI +L+
Sbjct: 253 CDYWLCAATDRFIRIWNLE 271
Score = 46 (21.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 5/27 (18%), Positives = 18/27 (66%)
Query: 286 VITASWDRVANLFDVETGTILQSLTGH 312
+++ WD++ +++++ + ++L GH
Sbjct: 174 IVSCGWDKLVKVWNLKNCDLNKNLEGH 200
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 139 (54.0 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 36/118 (30%), Positives = 56/118 (47%)
Query: 120 SNPSAQKLKTTNKLKVQTSKIVSSFKTS----LLSCYKIRSFSGHRDGVWDVAVRPGQPV 175
S P+ KLKT IV + T + K +S +GH + DV++
Sbjct: 28 STPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAK-KSLTGHSQAINDVSISSDGLF 86
Query: 176 LGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 233
S S D +VRLW G+ + + GH+ V SV F P+ ++SAS DK++ +W +
Sbjct: 87 ALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTL 144
Score = 78 (32.5 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 28/79 (35%), Positives = 38/79 (48%)
Query: 265 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL-TGHDEEPHILCVS- 322
K L GH+ V+ DG + D VA L+DV+ G L SL TG + LC S
Sbjct: 195 KNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG--STINSLCFSP 252
Query: 323 -SYYSKVSCDLFQRIQHLD 340
Y+ + D F RI +L+
Sbjct: 253 CDYWLCAATDRFIRIWNLE 271
Score = 46 (21.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 5/27 (18%), Positives = 18/27 (66%)
Query: 286 VITASWDRVANLFDVETGTILQSLTGH 312
+++ WD++ +++++ + ++L GH
Sbjct: 174 IVSCGWDKLVKVWNLKNCDLNKNLEGH 200
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 177 (67.4 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 51/165 (30%), Positives = 76/165 (46%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR+ GH V VA+ P + SAS D+T+++W TG CV ++GH V VR P
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVR--P 242
Query: 214 NKD--LVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEPDESSITLRTPVKELL 268
N+D L+ S+S D++V +W V EC S P+ + T + E
Sbjct: 243 NQDGTLIASSSNDQTVRVW-VVATKECKAELREHEHVVECISWAPESAHPT----ILEAT 297
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
G G +++ S D+ ++DV G L +L GHD
Sbjct: 298 GSETKKSG----KPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHD 338
Score = 164 (62.8 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 30/82 (36%), Positives = 48/82 (58%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R+ GH D V D++ +L S SAD T++LW Q +C+ GH +V+SV +PN
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 215 KDLVLSASGDKSVHIWQAVINW 236
D ++SAS DK++ +W+ +
Sbjct: 204 GDHIVSASRDKTIKMWEVATGY 225
Score = 123 (48.4 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 28/83 (33%), Positives = 41/83 (49%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ SGHR V V P V+ SAS D T+++W +TG GH+ SV + F
Sbjct: 103 ALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTG 162
Query: 216 DLVLSASGDKSVHIWQAVINWEC 238
L+ S S D ++ +W +EC
Sbjct: 163 KLLASCSADMTIKLWDFQ-GFEC 184
Score = 118 (46.6 bits), Expect = 0.00031, P = 0.00031
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 139 KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ 198
K + + S+ C + + GH + V V V PG + S + D+T+R+W + +C
Sbjct: 318 KTIKMWDVSIGMC--LMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKT 375
Query: 199 YSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231
S H V S+ F V++ S D++V +W+
Sbjct: 376 LSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 117 (46.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 31/128 (24%), Positives = 63/128 (49%)
Query: 103 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 162
EC+ M+ + + +A P+ + + ++ K + ++ + C +++F+GHR+
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASR-----DKTIKMWEVATGYC--VKTFTGHRE 235
Query: 163 GVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK--DLV 218
W VRP Q ++ S+S D+TVR+W T +C + H V + + P +
Sbjct: 236 --WVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTI 293
Query: 219 LSASGDKS 226
L A+G ++
Sbjct: 294 LEATGSET 301
Score = 114 (45.2 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229
+PG P L S S D+T+++W G C++ GH V V P ++S + DK++ I
Sbjct: 306 KPG-PFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRI 364
Query: 230 W 230
W
Sbjct: 365 W 365
Score = 83 (34.3 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 14/51 (27%), Positives = 32/51 (62%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
++ + GH + V + + +G+ +++AS D+ +++V TG +++ TGH E
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHRE 235
Score = 42 (19.8 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 265 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
K L H + V + D+ V+T S D+ +++
Sbjct: 374 KTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 141 (54.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 34/108 (31%), Positives = 55/108 (50%)
Query: 137 TSKIVSSFKTSLLSCYKIRS------FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWST 190
+S++VS+ L + +RS GH D V+ P ++ S S D +V++W
Sbjct: 93 SSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEV 152
Query: 191 QTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC 238
+TGKC+ S HS +++V F N L++S S D IW A + +C
Sbjct: 153 KTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAA-SGQC 199
Score = 134 (52.2 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
++ GH + DVA L SAS D+T+++W ++GKC+ GHS V F P
Sbjct: 75 KTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPP 134
Query: 215 KDLVLSASGDKSVHIWQ 231
+L++S S D+SV IW+
Sbjct: 135 SNLIVSGSFDESVKIWE 151
Score = 128 (50.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 41/177 (23%), Positives = 76/177 (42%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ +GH + V P L S++AD + +W G C GHS ++ V + +
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDS 93
Query: 216 DLVLSASGDKSVHIWQA-------VINWE-----CXXXXXXXXXXESKEPDES-SI-TLR 261
++SAS DK++ +W + C S DES I ++
Sbjct: 94 SRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVK 153
Query: 262 TP--VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEP 316
T +K L HS+ + A ++ +G +++ S+D + ++D +G L++L P
Sbjct: 154 TGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPP 210
Score = 113 (44.8 bits), Expect = 0.00076, P = 0.00076
Identities = 32/134 (23%), Positives = 64/134 (47%)
Query: 197 LQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA-------VINWECXXXXXXXXXXE 249
L +GHS +++SV+F PN + + S++ D + IW A + +
Sbjct: 33 LTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSD 92
Query: 250 SKE----PDESSIT---LRTP--VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV 300
S D+ ++ +R+ +K L GHS+ V D+ +++ S+D +++V
Sbjct: 93 SSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEV 152
Query: 301 ETGTILQSLTGHDE 314
+TG L++L+ H +
Sbjct: 153 KTGKCLKTLSAHSD 166
Score = 72 (30.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 282 DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
+G+ ++TA+ D L+D G L++ TGH E + L S
Sbjct: 219 NGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFAS 259
Score = 58 (25.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 264 VKELLGHSN--VVIAADWLSDGEQ-VITASWDRVANLFDVETGTILQSLTGHDE 314
+K GH N + A + G + V++ S D + +++++T I+Q L GH +
Sbjct: 243 LKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTD 296
Score = 40 (19.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 264 VKELLGHSNVVIAA 277
V+ L GH++VVI+A
Sbjct: 288 VQRLQGHTDVVISA 301
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 131 (51.2 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 156 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLP 213
+ SGH+D V D++ P G +L SAS D+T+R+W + GK + SGH V P
Sbjct: 148 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISP 207
Query: 214 NKDLVLSASGDKSVHIW 230
+ ++ SA+G+KSV +W
Sbjct: 208 DCSMLCSAAGEKSVFLW 224
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
+I+ SGH V+ ++ P +L SA+ +++V LWS ++ + + GH SV S F
Sbjct: 189 QIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFS 248
Query: 213 PNKDLVLSASGDKSVHIW 230
P+ L+++AS D SV +W
Sbjct: 249 PDSALLVTASYDTSVIMW 266
Score = 112 (44.5 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 175 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW 230
+L + D +++W QTG +L SGH V + F P+ L+L SAS DK++ IW
Sbjct: 125 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIW 181
Score = 84 (34.6 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEP 316
T +++L GH + V++ D+ D ++TAS+D ++D TG L+SL EP
Sbjct: 230 TLIRKLEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEP 284
Score = 47 (21.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
++ L GH V D + +A+ ++ L+ + + T+++ L GH
Sbjct: 190 IQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGH 238
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 163 (62.4 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R+ GH + V D+ +L S SAD T++LW QT CV GH +V+ VRF P+
Sbjct: 142 RTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPS 201
Query: 215 KDLVLSASGDKSVHIWQAVINW 236
D ++S+S DK++ +W+A +
Sbjct: 202 GDQLISSSRDKTIKVWEAATGY 223
Score = 129 (50.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 176 LGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
L + S D+T+++W TG+C+ Y GH V +VRF P +LS DK++ +W
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVW 373
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 38/165 (23%), Positives = 66/165 (40%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+++ GH V V P L S+S D+T+++W TG C+ GH V +
Sbjct: 183 VKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSE 242
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELL---GH 270
+ + S S D+++ W ++ EC ++ + P L G
Sbjct: 243 DGSCIASCSNDQTIKTWN-IVKGECLATYREHSHVVECLAFSTANIIDIPGSLLSTPEGK 301
Query: 271 SNVVIAADWLSDGE--QVITASWDRVANLFDVETGTILQSLTGHD 313
S V G+ + T S D+ ++++ TG L + GHD
Sbjct: 302 SKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATGRCLATYIGHD 346
Score = 115 (45.5 bits), Expect = 0.00070, P = 0.00070
Identities = 39/182 (21%), Positives = 71/182 (39%)
Query: 158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 217
+GHR+ + V P ++ SAS D T+++W ++G+ GH+ +V + F +L
Sbjct: 103 TGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNL 162
Query: 218 VLSASGDKSVHIWQAVI------------NWECXXXXXXXXXXESKEPDESSITLRTP-- 263
+ S S D ++ +W N C S D++
Sbjct: 163 LASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATG 222
Query: 264 --VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCV 321
+K L+GH + V DG + + S D+ +++ G L + H L
Sbjct: 223 YCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAF 282
Query: 322 SS 323
S+
Sbjct: 283 ST 284
Score = 47 (21.6 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 11/55 (20%), Positives = 29/55 (52%)
Query: 268 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL-CV 321
+GH N V A + G+ +++ D+ ++D+ G ++++ ++ H + C+
Sbjct: 343 IGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTI--NEAHTHFISCL 395
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 170 (64.9 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 46/165 (27%), Positives = 76/165 (46%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
++++ GH D + V P +L S S D T++LW +G GHS SV SV F
Sbjct: 33 ELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFS 92
Query: 213 PNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTP----VKELL 268
PN L+ S S D ++ +W + + ES + L P +K +
Sbjct: 93 PNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG-QLWNPAIGSLKHTI 151
Query: 269 -GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
GHS+ V++ + DG+ + + S ++ L+D T + +L GH
Sbjct: 152 EGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGH 196
Score = 161 (61.7 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 49/173 (28%), Positives = 73/173 (42%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
++ GH V VA P +L S S+D T++LW++ + GHS V SV F PN
Sbjct: 77 QTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPN 136
Query: 215 KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITL----RTPVKELLG- 269
L A G H + +W + E +I L +K LG
Sbjct: 137 GQLWNPAIGSLK-HTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGG 195
Query: 270 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
HSN V+ + DG + + S D L+D +G++ +L GH + L S
Sbjct: 196 HSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFS 248
Score = 141 (54.7 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ GH + + +A P +L S S+D T++LW T TG GHS V SV F P+
Sbjct: 234 TLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDS 293
Query: 216 DLVLSASGDKSVHIW 230
L+ S SGD ++ +W
Sbjct: 294 QLLESGSGDNTIKLW 308
Score = 128 (50.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 25/81 (30%), Positives = 39/81 (48%)
Query: 150 SCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 209
+C + GH + V + P +L S S D T++LW +G GHS + S+
Sbjct: 186 TCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESL 245
Query: 210 RFLPNKDLVLSASGDKSVHIW 230
F PN L+ S S D ++ +W
Sbjct: 246 AFSPNGQLLASGSSDATIKLW 266
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 129 (50.5 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 30/66 (45%), Positives = 39/66 (59%)
Query: 170 RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD--LVLSASGDKSV 227
R G P L SAS D T R+W+ TG+ SGH GSV+ VR+ +V +AS DK+V
Sbjct: 253 RDGTPRLVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTV 312
Query: 228 HIWQAV 233
+W AV
Sbjct: 313 KVWDAV 318
Score = 103 (41.3 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 27/88 (30%), Positives = 39/88 (44%)
Query: 144 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPV-LGSASADRTVRLWSTQTGKCVLQYSGH 202
FK +S R GH + + P L + S D T R+W +TG GH
Sbjct: 136 FKVQAVSRLAHR-IPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGH 194
Query: 203 SGSVNSVRFLPNKDLVLSASGDKSVHIW 230
+G V V + P+ + + S DK+V IW
Sbjct: 195 AGWVLGVSWSPDGTRLATCSMDKTVRIW 222
Score = 93 (37.8 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV-LQYSGHSGSVNSVRFLPN 214
+ GH V V+ P L + S D+TVR+W +TGK V + GH+ V + + P
Sbjct: 190 TLKGHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPL 249
Query: 215 ---KD---LVLSASGDKSVHIW 230
+D ++SAS D + IW
Sbjct: 250 HLWRDGTPRLVSASKDFTARIW 271
Score = 87 (35.7 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 263 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
P+ ++GH V + DG + +A WD L++ G + +L GH
Sbjct: 405 PIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGH 454
Score = 79 (32.9 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
+ L GH V + +D ++TAS D +++V TG + L GH++E
Sbjct: 448 INTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDE 499
Score = 70 (29.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 267 LLGHSNVVIAADW-LSDGEQVI-TASWDRVANLFDVETGTILQSLTGHDEEPHILCVSS 323
L GH V W +G V+ TAS D+ ++D GT+L L H + L +S+
Sbjct: 282 LSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLLHDLKSHAHWVNHLALST 340
Score = 58 (25.5 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 266 ELLGHSNVVIAADW-----LSDGE-QVITASWDRVANLFDVETGTILQSLTGHDEEPHIL 319
EL GH+ V W DG ++++AS D A ++ V TG L+GH + +
Sbjct: 233 ELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIWTVNTGRTEHVLSGH--KGSVS 290
Query: 320 CV 321
CV
Sbjct: 291 CV 292
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 131 (51.2 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 156 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLP 213
+ SGH+D V D++ P G +L SAS D+T+R+W + GK + SGH V P
Sbjct: 148 NLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISP 207
Query: 214 NKDLVLSASGDKSVHIW 230
+ ++ SA+G+KSV +W
Sbjct: 208 DCSMLCSAAGEKSVFLW 224
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
+I+ SGH V+ ++ P +L SA+ +++V LWS ++ + + GH SV S F
Sbjct: 189 QIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFS 248
Query: 213 PNKDLVLSASGDKSVHIW 230
P+ L+++AS D SV +W
Sbjct: 249 PDSALLVTASYDTSVIMW 266
Score = 117 (46.2 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 175 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW 230
+L + D +++W QTG +L SGH V + F PN L+L SAS DK++ IW
Sbjct: 125 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIW 181
Score = 81 (33.6 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 309
T +++L GH + V++ D+ D ++TAS+D ++D TG L+SL
Sbjct: 230 TLIRKLEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDPYTGERLRSL 277
Score = 47 (21.6 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
++ L GH V D + +A+ ++ L+ + + T+++ L GH
Sbjct: 190 IQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGH 238
>UNIPROTKB|Q9NYS7 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 HOGENOM:HOG000063727 HOVERGEN:HBG034543 CTD:55884
KO:K10342 EMBL:AF229181 EMBL:AF163324 EMBL:BC015887 IPI:IPI00941604
RefSeq:NP_061109.1 UniGene:Hs.506985 ProteinModelPortal:Q9NYS7
SMR:Q9NYS7 IntAct:Q9NYS7 MINT:MINT-1379403 STRING:Q9NYS7
PhosphoSite:Q9NYS7 DMDM:20532294 PRIDE:Q9NYS7 DNASU:55884
Ensembl:ENST00000315436 GeneID:55884 KEGG:hsa:55884 UCSC:uc001twr.2
GeneCards:GC12M118470 HGNC:HGNC:19222 neXtProt:NX_Q9NYS7
PharmGKB:PA128395787 InParanoid:Q9NYS7 PhylomeDB:Q9NYS7
GenomeRNAi:55884 NextBio:61208 ArrayExpress:Q9NYS7 Bgee:Q9NYS7
CleanEx:HS_WSB2 Genevestigator:Q9NYS7 GermOnline:ENSG00000176871
Uniprot:Q9NYS7
Length = 404
Score = 131 (51.2 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 156 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLP 213
+ SGH+D V D++ P G +L SAS D+T+R+W + GK + SGH V P
Sbjct: 148 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISP 207
Query: 214 NKDLVLSASGDKSVHIW 230
+ ++ SA+G+KSV +W
Sbjct: 208 DCSMLCSAAGEKSVFLW 224
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
+I+ SGH V+ ++ P +L SA+ +++V LWS ++ + + GH SV S F
Sbjct: 189 QIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFS 248
Query: 213 PNKDLVLSASGDKSVHIW 230
P+ L+++AS D +V +W
Sbjct: 249 PDSALLVTASYDTNVIMW 266
Score = 113 (44.8 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 175 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW 230
VL + D +++W QTG +L SGH V + F P+ L+L SAS DK++ IW
Sbjct: 125 VLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIW 181
Score = 81 (33.6 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEP 316
T +++L GH + V++ D+ D ++TAS+D ++D TG L+SL +P
Sbjct: 230 TLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDP 284
Score = 47 (21.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
++ L GH V D + +A+ ++ L+ + + T+++ L GH
Sbjct: 190 IQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGH 238
>UNIPROTKB|F5H280 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HGNC:HGNC:19222 EMBL:AC131238 IPI:IPI01011081
ProteinModelPortal:F5H280 SMR:F5H280 Ensembl:ENST00000535496
ArrayExpress:F5H280 Bgee:F5H280 Uniprot:F5H280
Length = 406
Score = 131 (51.2 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 156 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLP 213
+ SGH+D V D++ P G +L SAS D+T+R+W + GK + SGH V P
Sbjct: 150 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISP 209
Query: 214 NKDLVLSASGDKSVHIW 230
+ ++ SA+G+KSV +W
Sbjct: 210 DCSMLCSAAGEKSVFLW 226
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
+I+ SGH V+ ++ P +L SA+ +++V LWS ++ + + GH SV S F
Sbjct: 191 QIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFS 250
Query: 213 PNKDLVLSASGDKSVHIW 230
P+ L+++AS D +V +W
Sbjct: 251 PDSALLVTASYDTNVIMW 268
Score = 113 (44.8 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 175 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW 230
VL + D +++W QTG +L SGH V + F P+ L+L SAS DK++ IW
Sbjct: 127 VLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIW 183
Score = 81 (33.6 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEP 316
T +++L GH + V++ D+ D ++TAS+D ++D TG L+SL +P
Sbjct: 232 TLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDP 286
Score = 47 (21.6 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
++ L GH V D + +A+ ++ L+ + + T+++ L GH
Sbjct: 192 IQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGH 240
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 174 (66.3 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 53/173 (30%), Positives = 78/173 (45%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
++++ GH + VW VL S S D TVRLW TG GHSG V SV F
Sbjct: 695 ELQTLEGHSNSVW--------AVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFS 746
Query: 213 PNKDLVLSASGDKSVHIW-------QAVI----NWECXXXXXXXXXXESKEPDESSITLR 261
P+ L+ S S DK+V +W Q + NW + + ++ L
Sbjct: 747 PDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLW 806
Query: 262 TPV-----KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 309
P + L GHS+ V + + DG + + S+D+ L+D TGT+ Q+L
Sbjct: 807 DPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTL 859
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 148 (57.2 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 28/77 (36%), Positives = 43/77 (55%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GHR V ++ P L SA D+ ++LW +G + GH+ S+ S+ F P
Sbjct: 15 VRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSP 74
Query: 214 NKDLVLSASGDKSVHIW 230
+ L+ SAS D SV +W
Sbjct: 75 DSGLIASASMDNSVRVW 91
Score = 115 (45.5 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 182 DRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
D+TVRLWS Q G V ++GH G V S+ F PN + SA D+ + +W
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLW 49
Score = 53 (23.7 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET 302
T KEL GH++ + + + D + +AS D ++D+ +
Sbjct: 55 TLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRS 95
>UNIPROTKB|B4DIE6 [details] [associations]
symbol:WSB2 "cDNA FLJ59692, highly similar to WD repeat and
SOCS box-containing protein 2" species:9606 "Homo sapiens"
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HOGENOM:HOG000063727 HOVERGEN:HBG034543 OMA:HHPQVPD
UniGene:Hs.506985 HGNC:HGNC:19222 EMBL:AC131238 EMBL:AK295555
IPI:IPI00032828 SMR:B4DIE6 STRING:B4DIE6 Ensembl:ENST00000441406
Uniprot:B4DIE6
Length = 421
Score = 131 (51.2 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 156 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLP 213
+ SGH+D V D++ P G +L SAS D+T+R+W + GK + SGH V P
Sbjct: 165 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISP 224
Query: 214 NKDLVLSASGDKSVHIW 230
+ ++ SA+G+KSV +W
Sbjct: 225 DCSMLCSAAGEKSVFLW 241
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
+I+ SGH V+ ++ P +L SA+ +++V LWS ++ + + GH SV S F
Sbjct: 206 QIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFS 265
Query: 213 PNKDLVLSASGDKSVHIW 230
P+ L+++AS D +V +W
Sbjct: 266 PDSALLVTASYDTNVIMW 283
Score = 113 (44.8 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 175 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW 230
VL + D +++W QTG +L SGH V + F P+ L+L SAS DK++ IW
Sbjct: 142 VLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIW 198
Score = 81 (33.6 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEP 316
T +++L GH + V++ D+ D ++TAS+D ++D TG L+SL +P
Sbjct: 247 TLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDP 301
Score = 47 (21.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
++ L GH V D + +A+ ++ L+ + + T+++ L GH
Sbjct: 207 IQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGH 255
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 144 (55.7 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R +GH V D A+ SAS D+T+RLW + G+C Q+ GH+ V SV P+
Sbjct: 57 RRLTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPD 116
Query: 215 KDLVLSASGDKSVHIWQAVIN 235
V+S S DK++ IW + N
Sbjct: 117 NRQVVSGSRDKTIKIWNIIGN 137
Score = 61 (26.5 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 269 GHSNVVIAADWLSDGEQV--ITASWDRVANLFDVETGTILQSLTGH 312
GHS+ V + + + + ++A WD+ ++D+ET ++ S GH
Sbjct: 146 GHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGH 191
Score = 46 (21.3 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 17/56 (30%), Positives = 23/56 (41%)
Query: 254 DESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 309
D + +LRT GH+ V A DG + D L+D+ T L SL
Sbjct: 178 DLETFSLRT---SHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSL 230
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 131 (51.2 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 156 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLP 213
+ SGH+D V D++ P G +L SAS D+T+R+W + GK + SGH V P
Sbjct: 148 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISP 207
Query: 214 NKDLVLSASGDKSVHIW 230
+ ++ SA+G+KSV +W
Sbjct: 208 DCSMLCSAAGEKSVFLW 224
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
+I+ SGH V+ ++ P +L SA+ +++V LWS ++ + + GH SV S F
Sbjct: 189 QIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFS 248
Query: 213 PNKDLVLSASGDKSVHIW 230
P+ L+++AS D +V +W
Sbjct: 249 PDSALLVTASYDTNVIMW 266
Score = 112 (44.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 175 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW 230
+L + D +++W QTG +L SGH V + F P+ L+L SAS DK++ IW
Sbjct: 125 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIW 181
Score = 80 (33.2 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 309
T +++L GH + V++ D+ D ++TAS+D ++D TG L+SL
Sbjct: 230 TLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSL 277
Score = 47 (21.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
++ L GH V D + +A+ ++ L+ + + T+++ L GH
Sbjct: 190 IQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGH 238
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 131 (51.2 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 156 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLP 213
+ SGH+D V D++ P G +L SAS D+T+R+W + GK + SGH V P
Sbjct: 150 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISP 209
Query: 214 NKDLVLSASGDKSVHIW 230
+ ++ SA+G+KSV +W
Sbjct: 210 DCSMLCSAAGEKSVFLW 226
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
+I+ SGH V+ ++ P +L SA+ +++V LWS ++ + + GH SV S F
Sbjct: 191 QIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFS 250
Query: 213 PNKDLVLSASGDKSVHIW 230
P+ L+++AS D +V +W
Sbjct: 251 PDSALLVTASYDTNVIMW 268
Score = 112 (44.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 175 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW 230
+L + D +++W QTG +L SGH V + F P+ L+L SAS DK++ IW
Sbjct: 127 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIW 183
Score = 80 (33.2 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 309
T +++L GH + V++ D+ D ++TAS+D ++D TG L+SL
Sbjct: 232 TLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSL 279
Score = 47 (21.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
++ L GH V D + +A+ ++ L+ + + T+++ L GH
Sbjct: 192 IQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGH 240
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 172 (65.6 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 43/121 (35%), Positives = 64/121 (52%)
Query: 118 LASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLG 177
LA +P+ KL T + +T+K+ +L C + FSGHR G+W+V P VL
Sbjct: 485 LAVSPN-DKLLATGS-QDRTAKL-----WALPQCQLLGVFSGHRRGLWNVQFSPTDQVLA 537
Query: 178 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 237
+ASAD T++LW+ Q C+ + GH SV V F+ +LS+ D + +W N E
Sbjct: 538 TASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTIKSN-E 596
Query: 238 C 238
C
Sbjct: 597 C 597
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 171 (65.3 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 36/92 (39%), Positives = 50/92 (54%)
Query: 147 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 206
+L C + FSGHR G+W V P VL +ASAD T++LW+ Q C+ + GH SV
Sbjct: 396 ALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASV 455
Query: 207 NSVRFLPNKDLVLSASGDKSVHIWQAVINWEC 238
V F+ +LS+ D V +W + N EC
Sbjct: 456 LKVAFVSRGTQLLSSGSDGLVKLW-TIKNNEC 486
Score = 112 (44.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 219
H + VA+ P +L + S DRT +LW+ + + +SGH + V+F P ++
Sbjct: 367 HDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLA 426
Query: 220 SASGDKSVHIWQAVINWEC 238
+AS D ++ +W A+ ++ C
Sbjct: 427 TASADGTIKLW-ALQDFSC 444
Score = 61 (26.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
+K GH V+ ++S G Q++++ D + L+ ++ +++L H+++
Sbjct: 445 LKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNECVRTLDAHEDK 496
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 42/121 (34%), Positives = 64/121 (52%)
Query: 118 LASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLG 177
LA +P+ KL T + +T+K+ +L C + F+GHR G+W+V P VL
Sbjct: 485 LAVSPN-DKLLATGS-QDRTAKL-----WALPQCQLLGVFTGHRRGLWNVQFSPTDQVLA 537
Query: 178 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 237
+ASAD T++LW+ Q C+ + GH SV V F+ +LS+ D + +W N E
Sbjct: 538 TASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWTIKSN-E 596
Query: 238 C 238
C
Sbjct: 597 C 597
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 36/92 (39%), Positives = 50/92 (54%)
Query: 147 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 206
+L C + FSGHR G+W V P VL +ASAD T++LW+ Q C+ + GH SV
Sbjct: 507 ALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASV 566
Query: 207 NSVRFLPNKDLVLSASGDKSVHIWQAVINWEC 238
V F+ +LS+ D V +W + N EC
Sbjct: 567 LKVAFVSRGTQLLSSGSDGLVKLW-TIKNNEC 597
Score = 112 (44.5 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 219
H + VA+ P +L + S DRT +LW+ + + +SGH + V+F P ++
Sbjct: 478 HDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLA 537
Query: 220 SASGDKSVHIWQAVINWEC 238
+AS D ++ +W A+ ++ C
Sbjct: 538 TASADGTIKLW-ALQDFSC 555
Score = 61 (26.5 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
+K GH V+ ++S G Q++++ D + L+ ++ +++L H+++
Sbjct: 556 LKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNECVRTLDAHEDK 607
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 133 (51.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 51/228 (22%), Positives = 92/228 (40%)
Query: 17 TASGKLSNLGDQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQIEREFXXXXXXXXXXQ 76
T+S +L+ D D R LN+ P S F + ++ + +
Sbjct: 23 TSSDELAAGSDHDQERRRVSLNAYPPKRPYPRSRSFSSSESPDELAMDADVYWRSRNRGR 82
Query: 77 DKIDMLMEKLDRESIINEKYPECNDMECVT--NMNKNFNKQKVLASNP-SAQKLKTTNKL 133
D D + D E+ NE E N+ E NMN + N ++ S ++ T +
Sbjct: 83 D--DSPWARSDEENDENEADEEENENEDDEHDNMNGDDNGREANGSRERDLDEMDTVGEN 140
Query: 134 KVQTSKIVSSF--------KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTV 185
+ +T S K ++ + GH GV V P ++ S AD V
Sbjct: 141 EPETDPDRSPTPVPPPPPPKPESVNYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAV 200
Query: 186 RLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 233
++W+ TGK + + GH ++++ + P+ + S S DK++ +W +
Sbjct: 201 KVWAASTGKLIYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVL 248
Score = 133 (51.9 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC-VLQYSGHSGSVNSVRFL 212
I +F GH G+ ++ P + S S D+T+RLW+ TGK + GH V ++ F
Sbjct: 211 IYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFS 270
Query: 213 PNKDLVLSASGDKSVHIW 230
P ++++S S D++V +W
Sbjct: 271 PKGNMLVSGSYDEAVFLW 288
Score = 79 (32.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 268 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
+GH N V A + G +++ S+D L+DV + +++SL H +
Sbjct: 258 IGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSD 304
Score = 76 (31.8 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCV 321
+K L HS+ V D + DG + + + D + ++D TG L++L H++ P + V
Sbjct: 296 MKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLV-HEDNPPVSSV 352
Score = 47 (21.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 260 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL 319
LRT V E + V + + +G+ V+ + D L+D G L++ GH + + L
Sbjct: 338 LRTLVHE---DNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSL 394
Score = 41 (19.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 287 ITASWDRVANLFDVETGTILQSLTGHD 313
++ S D +DV T +LQ + HD
Sbjct: 416 VSGSEDGAILCWDVVTKKVLQRIEAHD 442
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 170 (64.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 35/92 (38%), Positives = 51/92 (55%)
Query: 147 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 206
+L C + +FSGHR G+W V P VL +ASAD T++LW+ Q C+ + GH SV
Sbjct: 507 ALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASV 566
Query: 207 NSVRFLPNKDLVLSASGDKSVHIWQAVINWEC 238
V F+ +LS+ D + +W + N EC
Sbjct: 567 LKVAFVSRGTQLLSSGSDGLLKLW-TIKNNEC 597
Score = 114 (45.2 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 219
H + VAV P +L + S DRT +LW+ + + +SGH + V+F P ++
Sbjct: 478 HDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVLA 537
Query: 220 SASGDKSVHIWQAVINWEC 238
+AS D ++ +W A+ ++ C
Sbjct: 538 TASADGTIKLW-ALQDFSC 555
Score = 109 (43.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 27/85 (31%), Positives = 43/85 (50%)
Query: 148 LLSCYKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS 205
++ CY F G V VA P + +L S++AD ++R+WS Q C+ + H +
Sbjct: 138 VVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCLAVLTAHYSA 197
Query: 206 VNSVRFLPNKDLVLSASGDKSVHIW 230
V S+ F + +LS+ DK IW
Sbjct: 198 VTSLTFSADGHTMLSSGRDKICVIW 222
Score = 60 (26.2 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
+K GH V+ ++S G Q++++ D + L+ ++ +++L H+++
Sbjct: 556 LKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNECVRTLDAHEDK 607
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 170 (64.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 35/92 (38%), Positives = 51/92 (55%)
Query: 147 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 206
+L C + +FSGHR G+W V P VL +ASAD T++LW+ Q C+ + GH SV
Sbjct: 507 ALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASV 566
Query: 207 NSVRFLPNKDLVLSASGDKSVHIWQAVINWEC 238
V F+ +LS+ D + +W + N EC
Sbjct: 567 LKVAFVSRGTQLLSSGSDGLLKLW-TIKNNEC 597
Score = 114 (45.2 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 219
H + VAV P +L + S DRT +LW+ + + +SGH + V+F P ++
Sbjct: 478 HDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVLA 537
Query: 220 SASGDKSVHIWQAVINWEC 238
+AS D ++ +W A+ ++ C
Sbjct: 538 TASADGTIKLW-ALQDFSC 555
Score = 109 (43.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 27/85 (31%), Positives = 43/85 (50%)
Query: 148 LLSCYKIRSFSGHRDGVWDVAVRP--GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGS 205
++ CY F G V VA P + +L S++AD ++R+WS Q C+ + H +
Sbjct: 138 VVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCLAVLTAHYSA 197
Query: 206 VNSVRFLPNKDLVLSASGDKSVHIW 230
V S+ F + +LS+ DK IW
Sbjct: 198 VTSLTFSADGHTMLSSGRDKICVIW 222
Score = 60 (26.2 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
+K GH V+ ++S G Q++++ D + L+ ++ +++L H+++
Sbjct: 556 LKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNECVRTLDAHEDK 607
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 141 (54.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
G ++GV VA+ P ++ + S D VRLW QTG + +Y GH SV SV F P+ +
Sbjct: 413 GPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSL 472
Query: 219 LSASGDKSVHIW 230
S S DKS+ +W
Sbjct: 473 ASGSLDKSLKLW 484
Score = 137 (53.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 29/83 (34%), Positives = 43/83 (51%)
Query: 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLW----STQTGKCVLQYSGHSGSVN 207
Y + + GH D V+ VA P L S S D++++LW S +C ++GH V
Sbjct: 448 YFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVL 507
Query: 208 SVRFLPNKDLVLSASGDKSVHIW 230
SV F P+ ++S S D+SV W
Sbjct: 508 SVAFSPDGSWLISGSKDRSVQFW 530
Score = 99 (39.9 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 153 KIRSF--SGHRDG---VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 207
K+ +F +DG + V P L + + D+TV++W T K + GH +
Sbjct: 314 KVHAFVDESEKDGDLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIY 373
Query: 208 SVRFLPNKDLVLSASGDKSVHIW 230
S+ + + ++S SGDK IW
Sbjct: 374 SLDYSSDGRFIVSGSGDKKAKIW 396
Score = 92 (37.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 24/85 (28%), Positives = 37/85 (43%)
Query: 153 KIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS----GHSGSVN 207
KI+ +F GH ++ + + S S D+ ++W + GKC G V
Sbjct: 360 KIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVT 419
Query: 208 SVRFLPNKDLVLSASGDKSVHIWQA 232
SV P+ LV + S D V +W A
Sbjct: 420 SVAMSPDGRLVAAGSLDNIVRLWDA 444
Score = 71 (30.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
GH + V++ + DG +I+ S DR +D GT L GH
Sbjct: 501 GHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGH 544
Score = 71 (30.1 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 266 ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
E +G N V + DG V S D + L+D +TG L+ GH
Sbjct: 410 EEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGH 456
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 163 (62.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 54/214 (25%), Positives = 93/214 (43%)
Query: 123 SAQKLKTTNKLKVQ---TSKIVSSFKTSLLSCYKIR-SFSGHRDGVWDVAVRPGQPVLGS 178
+ +K T + Q +S S T + Y ++ + +GH V V P L S
Sbjct: 3 TGEKKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLAS 62
Query: 179 ASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI---- 234
+SAD+ +++W GK SGH ++ V + + +L++SAS DK++ IW
Sbjct: 63 SSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL 122
Query: 235 -------NWE-CXXXXXXXXXXESKEPDES----SITLRTPVKELLGHSNVVIAADWLSD 282
N+ C S DES + +K L HS+ V A + D
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 182
Query: 283 GEQVITASWDRVANLFDVETGTILQSLTGHDEEP 316
G ++++S+D + ++D +G L++L D P
Sbjct: 183 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Score = 92 (37.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFL 212
+++ H D V V ++ S+S D R+W T +G+C+ + V+ V+F
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 213 PNKDLVLSASGDKSVHIW 230
PN +L+A+ D ++ +W
Sbjct: 224 PNGKYILAATLDNTLKLW 241
Score = 65 (27.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 15/54 (27%), Positives = 32/54 (59%)
Query: 264 VKELLGHSN--VVIAADW-LSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
+K GH N I A++ ++ G+ +++ S D + +++++T I+Q L GH +
Sbjct: 249 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 302
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 137 (53.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
GH GV D+ P + G+ D R+W +TG+CV+ GH + S+ F PN V
Sbjct: 348 GHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHV 407
Query: 219 LSASGDKSVHIW 230
+ SGD + +W
Sbjct: 408 ATGSGDNACKVW 419
Score = 107 (42.7 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 34/137 (24%), Positives = 54/137 (39%)
Query: 95 KYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKT-SLLSCYK 153
K P+C + + N N ++ +P A + + + + S K SL S
Sbjct: 244 KVPDCTLIRTLRGHNTNVG---AISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEP 300
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I GH V V P LG+ D + RLW + + +L GHS V+ + F P
Sbjct: 301 IADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHP 360
Query: 214 NKDLVLSASGDKSVHIW 230
+ L + D +W
Sbjct: 361 DGSLAGTGGLDSFARVW 377
Score = 93 (37.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 18/73 (24%), Positives = 34/73 (46%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD-L 217
GH ++ + P + + S D ++W + +C+ H V+SV+F PN
Sbjct: 390 GHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHY 449
Query: 218 VLSASGDKSVHIW 230
+L+ + D + IW
Sbjct: 450 LLTGAYDNTAKIW 462
Score = 73 (30.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLF 298
+P+K L GH V+ D DG+ + T S+DR L+
Sbjct: 468 SPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLW 504
Score = 58 (25.5 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 270 HSNVVIAADWL-SDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
H N+V + + +DG ++T ++D A ++ + L++L GH+
Sbjct: 433 HQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHE 477
>UNIPROTKB|Q7QJ33 [details] [associations]
symbol:AGAP007244 "Ribosome biogenesis protein WDR12
homolog" species:7165 "Anopheles gambiae" [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAAB01008807 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_308556.3
ProteinModelPortal:Q7QJ33 STRING:Q7QJ33
EnsemblMetazoa:AGAP007244-RA GeneID:1269902
KEGG:aga:AgaP_AGAP007244 VectorBase:AGAP007244 CTD:1269902
PhylomeDB:Q7QJ33 Uniprot:Q7QJ33
Length = 428
Score = 165 (63.1 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 44/154 (28%), Positives = 66/154 (42%)
Query: 163 GVWDVAVRPGQPVLGSASADRTVRLW----STQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
GV +++ V SAS D+T+ +W +T T +CV GH V + P K +
Sbjct: 155 GVAWISLNEQTGVFASASHDQTIMIWEWNMTTNTAECVHVCKGHERGVGCIAVNPAKTQM 214
Query: 219 LSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVVIAAD 278
S S D + IW E + + ++ ++ RTPV L GH V
Sbjct: 215 ASGSMDTMLKIWST----ELQADKGEPSATKKAKLEQDNV--RTPVVTLAGHREFVSGVQ 268
Query: 279 WLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
W+ D + T SWD L+D+ G I TG+
Sbjct: 269 WI-DNTTIATCSWDHTIKLWDLSMGGIKTEFTGN 301
Score = 87 (35.7 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP-NKD-- 216
H D V V + G + G+ D TV LW+T+ GK L GH +V V ++ N+
Sbjct: 110 HDDWVSAVQAKDGWILTGTY--DNTVNLWNTK-GKHKLTIPGHVAAVKGVAWISLNEQTG 166
Query: 217 LVLSASGDKSVHIWQ 231
+ SAS D+++ IW+
Sbjct: 167 VFASASHDQTIMIWE 181
Score = 70 (29.7 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 261 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLF 298
+ P+ EL+GH + V+A DW S+ + +++ D +F
Sbjct: 380 KAPIFELIGHEDKVLACDW-SNPKYILSGGSDNAVRVF 416
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 162 (62.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 51/197 (25%), Positives = 87/197 (44%)
Query: 137 TSKIVSSFKTSLLSCYKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC 195
+S S T + Y ++ + +GH V V P L S+SAD+ +++W GK
Sbjct: 20 SSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 79
Query: 196 VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI-----------NWE-CXXXXX 243
SGH ++ V + + +L++SAS DK++ IW N+ C
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 139
Query: 244 XXXXXESKEPDES----SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
S DES + +K L HS+ V A + DG ++++S+D + ++D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 300 VETGTILQSLTGHDEEP 316
+G L++L D P
Sbjct: 200 TASGQCLKTLIDDDNPP 216
Score = 92 (37.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFL 212
+++ H D V V ++ S+S D R+W T +G+C+ + V+ V+F
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 213 PNKDLVLSASGDKSVHIW 230
PN +L+A+ D ++ +W
Sbjct: 224 PNGKYILAATLDNTLKLW 241
Score = 65 (27.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 15/54 (27%), Positives = 32/54 (59%)
Query: 264 VKELLGHSN--VVIAADW-LSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
+K GH N I A++ ++ G+ +++ S D + +++++T I+Q L GH +
Sbjct: 249 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 302
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 162 (62.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 51/197 (25%), Positives = 87/197 (44%)
Query: 137 TSKIVSSFKTSLLSCYKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC 195
+S S T + Y ++ + +GH V V P L S+SAD+ +++W GK
Sbjct: 20 SSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 79
Query: 196 VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI-----------NWE-CXXXXX 243
SGH ++ V + + +L++SAS DK++ IW N+ C
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 139
Query: 244 XXXXXESKEPDES----SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
S DES + +K L HS+ V A + DG ++++S+D + ++D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 300 VETGTILQSLTGHDEEP 316
+G L++L D P
Sbjct: 200 TASGQCLKTLIDDDNPP 216
Score = 92 (37.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFL 212
+++ H D V V ++ S+S D R+W T +G+C+ + V+ V+F
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 213 PNKDLVLSASGDKSVHIW 230
PN +L+A+ D ++ +W
Sbjct: 224 PNGKYILAATLDNTLKLW 241
Score = 65 (27.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 15/54 (27%), Positives = 32/54 (59%)
Query: 264 VKELLGHSN--VVIAADW-LSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
+K GH N I A++ ++ G+ +++ S D + +++++T I+Q L GH +
Sbjct: 249 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 302
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 162 (62.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 51/197 (25%), Positives = 87/197 (44%)
Query: 137 TSKIVSSFKTSLLSCYKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC 195
+S S T + Y ++ + +GH V V P L S+SAD+ +++W GK
Sbjct: 20 SSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 79
Query: 196 VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI-----------NWE-CXXXXX 243
SGH ++ V + + +L++SAS DK++ IW N+ C
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 139
Query: 244 XXXXXESKEPDES----SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
S DES + +K L HS+ V A + DG ++++S+D + ++D
Sbjct: 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 300 VETGTILQSLTGHDEEP 316
+G L++L D P
Sbjct: 200 TASGQCLKTLIDDDNPP 216
Score = 92 (37.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFL 212
+++ H D V V ++ S+S D R+W T +G+C+ + V+ V+F
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 213 PNKDLVLSASGDKSVHIW 230
PN +L+A+ D ++ +W
Sbjct: 224 PNGKYILAATLDNTLKLW 241
Score = 65 (27.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 15/54 (27%), Positives = 32/54 (59%)
Query: 264 VKELLGHSN--VVIAADW-LSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
+K GH N I A++ ++ G+ +++ S D + +++++T I+Q L GH +
Sbjct: 249 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 302
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 164 (62.8 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 48/185 (25%), Positives = 78/185 (42%)
Query: 153 KIRSFSGHRDGVWDVAVR-PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 211
++ + GHR+ V+ +A P + + S D+T +LWS +TGKC + GH+ + + F
Sbjct: 126 ELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAF 185
Query: 212 LPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESK------------EPDESSIT 259
P LV + S D + +W E S D ++I
Sbjct: 186 NPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAIL 245
Query: 260 LRTP----VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
P V L GH + + D + TAS D+ ++D E G L +L GH++E
Sbjct: 246 WDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDE 305
Query: 316 PHILC 320
+C
Sbjct: 306 VLDVC 310
Score = 150 (57.9 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 59/229 (25%), Positives = 99/229 (43%)
Query: 120 SNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSA 179
+NP K+ T + K T K+ S+ +T C+ +F GH + +A P ++ +
Sbjct: 143 NNPYGDKVATGSFDK--TCKLWSA-ETG--KCFY--TFRGHTAEIVCLAFNPQSTLVATG 195
Query: 180 SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA------- 232
S D T +LW ++G+ V +GH + S+ F D +++ S D + +W
Sbjct: 196 SMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVH 255
Query: 233 VI------------NWECXXXXXXXXXXESKEPD-ESSITLRTPVKELLGHSNVVIAADW 279
V+ NW+C K D E L T LLGH++ V+ +
Sbjct: 256 VLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLAT----LLGHNDEVLDVCF 311
Query: 280 LSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKV 328
G+ + TAS D + +F +T L L GH E +C ++ S+V
Sbjct: 312 NYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRV 360
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 49/188 (26%), Positives = 83/188 (44%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
++ + +GH + + L + S D T LW +G+ V SGH G ++ V+F
Sbjct: 211 EVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFN 270
Query: 213 PNKDLVLSASGDKSVHIWQA--------VI--NWE----CXXXXXXXXXXESKEPDESSI 258
+ L+ +AS DKS +W A ++ N E C S +
Sbjct: 271 WDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVF 330
Query: 259 TLRT--PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEP 316
+ T + +L GH + + + G +V+TAS D+ + ++ V+TG LQ L GH +E
Sbjct: 331 STDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEI 390
Query: 317 HILCVSSY 324
C +Y
Sbjct: 391 -FSCAFNY 397
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 30/95 (31%), Positives = 45/95 (47%)
Query: 137 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKC 195
TS++ F T C + GH+ + V G VL +AS D+T R+W +TG C
Sbjct: 326 TSRV---FSTDTFQC--LCQLEGHKGEISKVCFNAQGSRVL-TASVDKTSRVWCVKTGAC 379
Query: 196 VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
+ GHS + S F D +++ S D + IW
Sbjct: 380 LQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 151 (58.2 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 40/138 (28%), Positives = 65/138 (47%)
Query: 99 CNDMECVTNMNKNFNKQKVLASNPS--AQKLKTTNKLKVQT--SKIVSSFKTSLLSCYKI 154
C D+ + + + K + + + A L +KL S+ + + L C I
Sbjct: 38 CGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKC--I 95
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP- 213
RS+ GH V +A +L +A ADR V +W G C + GH G V+S+ F P
Sbjct: 96 RSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPD 155
Query: 214 -NKDLVLSASGDKSVHIW 230
NK++++S S D +V +W
Sbjct: 156 SNKNILISGSDDATVRVW 173
Score = 122 (48.0 bits), Expect = 0.00032, P = 0.00032
Identities = 46/185 (24%), Positives = 84/185 (45%)
Query: 133 LKVQTS-KIVSSFKTSLLSCYKIRSFSGHRDGVW--DVAVRP-GQPVLGSASADRTVRLW 188
L V T+ + V + + +SC + +GH++ V D V G ++ + S D+TVRLW
Sbjct: 374 LAVATNLEEVRVYDVATMSCSYV--LAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLW 431
Query: 189 STQTGKCVLQYSGHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQAVINWECXXXXXXXXX 247
+ + C+ +GH+G + +V F +S SGD+++ +W
Sbjct: 432 NATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL-----------DGIS 480
Query: 248 XESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQ 307
+S+EP I L+T + H + + + V T S DR A+++ + +
Sbjct: 481 EDSEEP----INLKTR-SVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVV 535
Query: 308 SLTGH 312
+L GH
Sbjct: 536 TLKGH 540
Score = 63 (27.2 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 26/89 (29%), Positives = 44/89 (49%)
Query: 267 LLGHSNVVIAADWL--SDGEQ-VITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS- 322
L GH VV++ D S G ++T S D+ L++ + + + TGH+ + IL V+
Sbjct: 397 LAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGD--ILAVAF 454
Query: 323 -----SYYSKVSCDLFQRIQHLDCGTSEN 346
S++ S D ++ LD G SE+
Sbjct: 455 AKKSFSFFVSGSGDRTLKVWSLD-GISED 482
Score = 61 (26.5 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 265 KELLGHSNVVIAADWLSDGEQVITASWD-RVANLFDVETGTILQSLTGHDEEPHIL--CV 321
K L+G++ + +L D EQ + + + ++DV T + L GH E L CV
Sbjct: 352 KRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCV 411
Query: 322 SS 323
SS
Sbjct: 412 SS 413
Score = 47 (21.6 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 13/54 (24%), Positives = 26/54 (48%)
Query: 270 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSS 323
H + V + DG + +A D+V NL+D+ + ++ ++ + VSS
Sbjct: 191 HFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEVLEAVTTVSS 244
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 172 (65.6 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 50/175 (28%), Positives = 76/175 (43%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+F H D V V+ L SAS V++W T+TG GH VNSV F P+
Sbjct: 384 TFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDS 443
Query: 216 DLVLSASGDKSVHIWQAVI-----------NWECXXXXXXXXXXESKEPDESSI----TL 260
L+ SAS D++V IW A +W + D+ ++ T
Sbjct: 444 RLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTA 503
Query: 261 RTPVKELL-GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
P++ L H N V + + D + +AS D ++D TG++ +L GHD+
Sbjct: 504 TVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDD 558
Score = 159 (61.0 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 48/175 (27%), Positives = 81/175 (46%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ GH + V V +L SAS D TV++W T TG GH+ SV SV F +
Sbjct: 300 TLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDS 359
Query: 216 DLVLSASGDKSVHIWQAVIN-----WECXXXX--XXXXXXESKE----PDESSITL---R 261
L+ S S D++V IW+ +E +S+ D ++ + R
Sbjct: 360 RLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTR 419
Query: 262 T-PVKELL-GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
T ++ +L GH + V + + D + +AS DR ++ TG++ ++L GH++
Sbjct: 420 TGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHND 474
Score = 147 (56.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/169 (28%), Positives = 72/169 (42%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
GH D V V+ P +L SAS DRTV++W TG GH+ V SV F + L+
Sbjct: 429 GHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLI 488
Query: 219 LSASGDKSVHIWQ-AVI----------NWECXXXXXXXXXXESKEPDESSITL---RTPV 264
SAS D +V IW A + NW + D+ ++ + T
Sbjct: 489 ASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGS 548
Query: 265 KE--LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG 311
E L GH + V + + D + +AS D ++ TGT+ + G
Sbjct: 549 LENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDG 597
Score = 136 (52.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 49/183 (26%), Positives = 79/183 (43%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
F GH V V+ +L SAS D TV++W T T GH+ V SV F +
Sbjct: 259 FKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSR 318
Query: 217 LVLSASGDKSVHIW-------QAVINWECXXXXXXXXXXESK----EPDESSITLRTPVK 265
L+ SAS D +V IW Q ++ +S+ ++ ++ +
Sbjct: 319 LLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTT 378
Query: 266 ELLGHS-----NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILC 320
LL H+ + V+A + D ++ +AS ++D TG++ L GHD+ C
Sbjct: 379 GLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDD-----C 433
Query: 321 VSS 323
V+S
Sbjct: 434 VNS 436
Score = 135 (52.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 31/77 (40%), Positives = 39/77 (50%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ H + V V +L SAS D TV++W T TG GH VNSV F P+
Sbjct: 510 NLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDS 569
Query: 216 DLVLSASGDKSVHIWQA 232
L+ SAS D +V IW A
Sbjct: 570 RLLASASDDGTVKIWYA 586
Score = 131 (51.2 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 45/175 (25%), Positives = 71/175 (40%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R GH D V V ++ S S DRTVR+W T TG + H SV +V F +
Sbjct: 341 RMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHD 400
Query: 215 KDLVLSASGDKSVHIW-------QAVINW--ECXXXXXXXXXXE--SKEPDESSITLRTP 263
+ SAS +V IW Q V+ +C + D+ ++ +
Sbjct: 401 SRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHA 460
Query: 264 V-----KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
+ L GH++ V + + D + +AS D ++D T + +L HD
Sbjct: 461 ATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHD 515
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 131 (51.2 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R++SGH V D A L S D+ V LW +G+ V ++ GH+G VN+V+F
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNE 119
Query: 214 NKDLVLSASGDKSVHIW 230
++LS S D ++ W
Sbjct: 120 EATVILSGSIDSTIRCW 136
Score = 70 (29.7 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 282 DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL--CVSSYYSKV-SC 330
DG+ + +S D L D +TG +L TGH + + L C+S + V SC
Sbjct: 202 DGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNKEYKLDCCLSERDTHVVSC 253
Score = 45 (20.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/66 (33%), Positives = 30/66 (45%)
Query: 266 ELLGHSNVVIAADW-LSDGE-QVITAS-------WDRV--ANLFDVETGT-ILQSLTGHD 313
E GH N D LS+ + V++ S WD V A + G ++QSLT H
Sbjct: 228 EYTGHKNKEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGPGVVQSLTYHP 287
Query: 314 EEPHIL 319
EP +L
Sbjct: 288 TEPCLL 293
>UNIPROTKB|F1P6A3 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:55884 KO:K10342 OMA:HHPQVPD
EMBL:AAEX03014719 RefSeq:XP_534697.2 ProteinModelPortal:F1P6A3
Ensembl:ENSCAFT00000015752 GeneID:477500 KEGG:cfa:477500
Uniprot:F1P6A3
Length = 406
Score = 131 (51.2 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 156 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLP 213
+ SGH+D V D++ P G +L SAS D+T+R+W + GK + SGH V P
Sbjct: 150 NLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISP 209
Query: 214 NKDLVLSASGDKSVHIW 230
+ ++ SA+G+KSV +W
Sbjct: 210 DCSMLCSAAGEKSVFLW 226
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
+I+ SGH V+ ++ P +L SA+ +++V LWS ++ + + GH SV S F
Sbjct: 191 QIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFS 250
Query: 213 PNKDLVLSASGDKSVHIW 230
P+ L+++AS D +V +W
Sbjct: 251 PDSALLVTASYDTNVIMW 268
Score = 112 (44.5 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 175 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW 230
+L + D +++W QTG +L SGH V + F P+ L+L SAS DK++ IW
Sbjct: 127 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIW 183
Score = 74 (31.1 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 309
T +++L GH + V++ D+ D ++TAS+D ++D TG L+ L
Sbjct: 232 TLIRKLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRLL 279
Score = 47 (21.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
++ L GH V D + +A+ ++ L+ + + T+++ L GH
Sbjct: 192 IQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGH 240
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 151 (58.2 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 35/99 (35%), Positives = 53/99 (53%)
Query: 138 SKIVSSFKTSLLSCYKIRSFS------GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ 191
S ++S + S + + ++SF+ GH VWDV V P +AS DRT RLWS
Sbjct: 367 SGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFA 426
Query: 192 TGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
+ Y+GH V+ V+F PN + + + S DK+V +W
Sbjct: 427 RTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLW 465
Score = 149 (57.5 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 147 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 206
S Y +R ++GH V V P + + S D+TVRLWST+ G V ++GH G V
Sbjct: 424 SFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPV 483
Query: 207 NSVRFLPNKDLVLSASGDKSVHIW 230
++ F PN + SA D+ + +W
Sbjct: 484 LTLAFSPNGKYLASAGEDQRLKLW 507
Score = 136 (52.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 27/77 (35%), Positives = 42/77 (54%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GHR V +A P L SA D+ ++LW +G GH+ +++S+ F
Sbjct: 473 VRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQ 532
Query: 214 NKDLVLSASGDKSVHIW 230
+ LV SAS D +V +W
Sbjct: 533 DSSLVASASMDNTVRVW 549
Score = 57 (25.1 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 265 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV 300
K+L GH++ + + + D V +AS D ++D+
Sbjct: 516 KDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDI 551
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 130 (50.8 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
GH GV+D+A + G+ D R+W +TG+C++ GH + + F PN +
Sbjct: 362 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 421
Query: 219 LSASGDKSVHIW 230
+ SGD + +W
Sbjct: 422 ATGSGDNTCKVW 433
Score = 98 (39.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I GH ++ + P + + S D T ++W + +CV H V V+F P
Sbjct: 399 IMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEP 458
Query: 214 -NKDLVLSASGDKSVHIW 230
+ D +L+ + D + IW
Sbjct: 459 IHGDFLLTGAYDNTAKIW 476
Score = 87 (35.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 31/135 (22%), Positives = 51/135 (37%)
Query: 97 PECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKT-SLLSCYKIR 155
P+C+ + + N N + +P + + + + S K SL S +
Sbjct: 260 PDCSLLHTLRGHNTNVG---AIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVA 316
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
GH V V P LG+ DR+ RLW + + +L GHS V + F +
Sbjct: 317 DIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDG 376
Query: 216 DLVLSASGDKSVHIW 230
L + D +W
Sbjct: 377 SLAGTGGLDAFGRVW 391
Score = 78 (32.5 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 301
+P+K L GH V+ D SDG+ + T S+DR L+ E
Sbjct: 482 SPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 521
Score = 52 (23.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 261 RTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL 319
R V + H N+V + G+ ++T ++D A ++ + L++L GH+ + L
Sbjct: 438 RRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL 497
Query: 320 CVSS 323
+SS
Sbjct: 498 DISS 501
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 130 (50.8 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
GH GV+D+A + G+ D R+W +TG+C++ GH + + F PN +
Sbjct: 362 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 421
Query: 219 LSASGDKSVHIW 230
+ SGD + +W
Sbjct: 422 ATGSGDNTCKVW 433
Score = 93 (37.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I GH ++ + P + + S D T ++W + +CV H V V+F P
Sbjct: 399 IMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEP 458
Query: 214 -NKDLVLSASGDKSVHIW 230
+ + +L+ + D + IW
Sbjct: 459 IHGNFLLTGAYDNTAKIW 476
Score = 93 (37.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 32/135 (23%), Positives = 51/135 (37%)
Query: 97 PECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKT-SLLSCYKIR 155
P+CN + + N N + +P + + + + S K SL S +
Sbjct: 260 PDCNLLHTLRGHNTNVG---AIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVA 316
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
GH V V P LG+ DR+ RLW + + +L GHS V + F +
Sbjct: 317 DIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDG 376
Query: 216 DLVLSASGDKSVHIW 230
L + D +W
Sbjct: 377 SLAGTGGLDAFGRVW 391
Score = 78 (32.5 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 301
+P+K L GH V+ D SDG+ + T S+DR L+ E
Sbjct: 482 SPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 521
Score = 50 (22.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 16/64 (25%), Positives = 31/64 (48%)
Query: 261 RTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL 319
R V + H N+V + G ++T ++D A ++ + L++L GH+ + L
Sbjct: 438 RRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL 497
Query: 320 CVSS 323
+SS
Sbjct: 498 DISS 501
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 130 (50.8 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
GH GV+D+A + G+ D R+W +TG+C++ GH + + F PN +
Sbjct: 363 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 422
Query: 219 LSASGDKSVHIW 230
+ SGD + +W
Sbjct: 423 ATGSGDNTCKVW 434
Score = 93 (37.8 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I GH ++ + P + + S D T ++W + +CV H V V+F P
Sbjct: 400 IMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEP 459
Query: 214 -NKDLVLSASGDKSVHIW 230
+ + +L+ + D + IW
Sbjct: 460 IHGNFLLTGAYDNTAKIW 477
Score = 92 (37.4 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 32/135 (23%), Positives = 51/135 (37%)
Query: 97 PECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKT-SLLSCYKIR 155
P+CN + + N N + +P + + + + S K SL S +
Sbjct: 261 PDCNLLHTLRGHNTNVG---AIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVA 317
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
GH V V P LG+ DR+ RLW + + +L GHS V + F +
Sbjct: 318 DIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDG 377
Query: 216 DLVLSASGDKSVHIW 230
L + D +W
Sbjct: 378 SLAGTGGLDAFGRVW 392
Score = 78 (32.5 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 301
+P+K L GH V+ D SDG+ + T S+DR L+ E
Sbjct: 483 SPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 522
Score = 50 (22.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 16/64 (25%), Positives = 31/64 (48%)
Query: 261 RTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL 319
R V + H N+V + G ++T ++D A ++ + L++L GH+ + L
Sbjct: 439 RRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL 498
Query: 320 CVSS 323
+SS
Sbjct: 499 DISS 502
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 130 (50.8 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
GH GV+D+A + G+ D R+W +TG+C++ GH + + F PN +
Sbjct: 378 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 437
Query: 219 LSASGDKSVHIW 230
+ SGD + +W
Sbjct: 438 ATGSGDNTCKVW 449
Score = 93 (37.8 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I GH ++ + P + + S D T ++W + +CV H V V+F P
Sbjct: 415 IMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEP 474
Query: 214 -NKDLVLSASGDKSVHIW 230
+ + +L+ + D + IW
Sbjct: 475 IHGNFLLTGAYDNTAKIW 492
Score = 92 (37.4 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 32/135 (23%), Positives = 51/135 (37%)
Query: 97 PECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKT-SLLSCYKIR 155
P+CN + + N N + +P + + + + S K SL S +
Sbjct: 276 PDCNLLHTLRGHNTNVG---AIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVA 332
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
GH V V P LG+ DR+ RLW + + +L GHS V + F +
Sbjct: 333 DIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDG 392
Query: 216 DLVLSASGDKSVHIW 230
L + D +W
Sbjct: 393 SLAGTGGLDAFGRVW 407
Score = 78 (32.5 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 301
+P+K L GH V+ D SDG+ + T S+DR L+ E
Sbjct: 498 SPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 537
Score = 50 (22.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 16/64 (25%), Positives = 31/64 (48%)
Query: 261 RTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL 319
R V + H N+V + G ++T ++D A ++ + L++L GH+ + L
Sbjct: 454 RRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL 513
Query: 320 CVSS 323
+SS
Sbjct: 514 DISS 517
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 130 (50.8 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
GH GV+D+A + G+ D R+W +TG+C++ GH + + F PN +
Sbjct: 380 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI 439
Query: 219 LSASGDKSVHIW 230
+ SGD + +W
Sbjct: 440 ATGSGDNTCKVW 451
Score = 93 (37.8 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I GH ++ + P + + S D T ++W + +CV H V V+F P
Sbjct: 417 IMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEP 476
Query: 214 -NKDLVLSASGDKSVHIW 230
+ + +L+ + D + IW
Sbjct: 477 IHGNFLLTGAYDNTAKIW 494
Score = 92 (37.4 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 32/135 (23%), Positives = 51/135 (37%)
Query: 97 PECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKT-SLLSCYKIR 155
P+CN + + N N + +P + + + + S K SL S +
Sbjct: 278 PDCNLLHTLRGHNTNVG---AIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVA 334
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
GH V V P LG+ DR+ RLW + + +L GHS V + F +
Sbjct: 335 DIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDG 394
Query: 216 DLVLSASGDKSVHIW 230
L + D +W
Sbjct: 395 SLAGTGGLDAFGRVW 409
Score = 78 (32.5 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 301
+P+K L GH V+ D SDG+ + T S+DR L+ E
Sbjct: 500 SPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 539
Score = 50 (22.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 16/64 (25%), Positives = 31/64 (48%)
Query: 261 RTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL 319
R V + H N+V + G ++T ++D A ++ + L++L GH+ + L
Sbjct: 456 RRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL 515
Query: 320 CVSS 323
+SS
Sbjct: 516 DISS 519
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 164 (62.8 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 65/240 (27%), Positives = 106/240 (44%)
Query: 135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK 194
++ +I ++++ L K+ GH D V G ++ S S D T+++WS TGK
Sbjct: 236 IRQHRIDTNWRRGELKSPKV--LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGK 292
Query: 195 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXX------ 248
C+ GH+G V S + N +++S S D+++ +W A EC
Sbjct: 293 CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG-ECIHTLYGHTSTVRCMHL 349
Query: 249 -ESKEPDES-SITLRTPVKE-------LLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
E + S TLR E L+GH V + DG +V++ ++D + ++D
Sbjct: 350 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 407
Query: 300 VETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS 359
ET T L +L GH + L + VS L I+ D T N IH++ Q + S
Sbjct: 408 PETETCLHTLQGHTNRVYSLQFDGIHV-VSGSLDTSIRVWDVETG-NCIHTLTGHQSLTS 465
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 161 (61.7 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 48/182 (26%), Positives = 82/182 (45%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLP 213
R F+GH G+ + P + ++S D TV LW+ Q +C+ +++ HS VN V + P
Sbjct: 12 RHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCI-RFASHSAPVNGVAWSP 70
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKE-----------PDESS----- 257
+LV SA D++V IW+ + S + D+ S
Sbjct: 71 KGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWR 130
Query: 258 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPH 317
+ R V +N V +A + +G+ V TAS D+ ++DV++G +++ T P
Sbjct: 131 VARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPR 190
Query: 318 IL 319
L
Sbjct: 191 QL 192
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 37/130 (28%), Positives = 56/130 (43%)
Query: 103 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 162
ECV + + LA +P L L KI + LL Y + H
Sbjct: 177 ECVRTFTEERAAPRQLAWHPWGNMLAVA--LGCNRIKIFDVSGSQLLQLYVV-----HSA 229
Query: 163 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSAS 222
V DVA P L S S DRT+R+ G+ + +GH+ +VN+V F + D +
Sbjct: 230 PVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGG 289
Query: 223 GDKSVHIWQA 232
D+ + +WQ+
Sbjct: 290 SDRQLLVWQS 299
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 160 (61.4 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 57/217 (26%), Positives = 98/217 (45%)
Query: 120 SNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSC---YKIR-SFSGHRDGVWDVAVRPGQPV 175
S P++ + + + TS S+ S LS Y ++ + +GH V V P
Sbjct: 27 SGPNSLQPNSVGQPGATTSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEW 86
Query: 176 LGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI- 234
L S+SAD+ +++W GK SGH ++ V + + L++S S DK++ +W+
Sbjct: 87 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTG 146
Query: 235 ----------NWE-CXXXXXXXXXXESKEPDES-SI-TLRTP--VKELLGHSNVVIAADW 279
N+ C S DES I +RT +K L HS+ V A +
Sbjct: 147 KSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 206
Query: 280 LSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEP 316
DG ++++S+D + ++D +G L++L D P
Sbjct: 207 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP 243
Score = 92 (37.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFL 212
+++ H D V V ++ S+S D R+W T +G+C+ + V+ V+F
Sbjct: 191 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 250
Query: 213 PNKDLVLSASGDKSVHIW 230
PN +L+A+ D ++ +W
Sbjct: 251 PNGKYILAATLDNTLKLW 268
Score = 66 (28.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 15/64 (23%), Positives = 37/64 (57%)
Query: 264 VKELLGHSN--VVIAADW-LSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILC 320
+K GH N I A++ ++ G+ +++ S D + ++++++ ++Q L GH + +LC
Sbjct: 276 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDT--VLC 333
Query: 321 VSSY 324
+ +
Sbjct: 334 TACH 337
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 134 (52.2 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R++SGH V D A L S D+ V LW +G+ V ++ GH+G VN+V+F
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNE 119
Query: 214 NKDLVLSASGDKSVHIW 230
++LS S D S+ W
Sbjct: 120 EATVILSGSIDSSIRCW 136
Score = 65 (27.9 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 282 DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL--CVSSYYSKV-SC 330
DG+ + +S D L D +TG +L GH + + L C+S + V SC
Sbjct: 202 DGQCTLVSSLDSTLRLLDKDTGELLGEYKGHKNQEYKLDCCLSERDTHVVSC 253
Score = 41 (19.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 21/66 (31%), Positives = 30/66 (45%)
Query: 266 ELLGHSNVVIAADW-LSDGE-QVITAS-------WDRV--ANLFDVETGT-ILQSLTGHD 313
E GH N D LS+ + V++ S WD V A + G+ ++QSL H
Sbjct: 228 EYKGHKNQEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGSGVVQSLAYHP 287
Query: 314 EEPHIL 319
EP +L
Sbjct: 288 TEPCLL 293
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 65/240 (27%), Positives = 106/240 (44%)
Query: 135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK 194
++ +I ++++ L K+ GH D V G ++ S S D T+++WS TGK
Sbjct: 276 IRQHRIDTNWRRGELKSPKV--LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGK 332
Query: 195 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXX------ 248
C+ GH+G V S + N +++S S D+++ +W A EC
Sbjct: 333 CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG-ECIHTLYGHTSTVRCMHL 389
Query: 249 -ESKEPDES-SITLRTPVKE-------LLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
E + S TLR E L+GH V + DG +V++ ++D + ++D
Sbjct: 390 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 447
Query: 300 VETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS 359
ET T L +L GH + L + VS L I+ D T N IH++ Q + S
Sbjct: 448 PETETCLHTLQGHTNRVYSLQFDGIHV-VSGSLDTSIRVWDVETG-NCIHTLTGHQSLTS 505
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 65/240 (27%), Positives = 106/240 (44%)
Query: 135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK 194
++ +I ++++ L K+ GH D V G ++ S S D T+++WS TGK
Sbjct: 278 IRQHRIDTNWRRGELKSPKV--LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGK 334
Query: 195 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXX------ 248
C+ GH+G V S + N +++S S D+++ +W A EC
Sbjct: 335 CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG-ECIHTLYGHTSTVRCMHL 391
Query: 249 -ESKEPDES-SITLRTPVKE-------LLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
E + S TLR E L+GH V + DG +V++ ++D + ++D
Sbjct: 392 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 449
Query: 300 VETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS 359
ET T L +L GH + L + VS L I+ D T N IH++ Q + S
Sbjct: 450 PETETCLHTLQGHTNRVYSLQFDGIHV-VSGSLDTSIRVWDVETG-NCIHTLTGHQSLTS 507
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 129 (50.5 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
GH GV+D+A + G+ D R+W +TG+C++ GH + + F PN +
Sbjct: 362 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHI 421
Query: 219 LSASGDKSVHIW 230
+ SGD + +W
Sbjct: 422 ATGSGDNTCKVW 433
Score = 101 (40.6 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I GH ++ ++ P + + S D T ++W + +CV H V V+F P
Sbjct: 399 IMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEP 458
Query: 214 -NKDLVLSASGDKSVHIW 230
+ D +L+ + D + IW
Sbjct: 459 IHGDFLLTGAYDNTAKIW 476
Score = 87 (35.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 31/135 (22%), Positives = 51/135 (37%)
Query: 97 PECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKT-SLLSCYKIR 155
P+C+ + + N N + +P + + + + S K SL S +
Sbjct: 260 PDCSLLHTLRGHNTNVG---AIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVA 316
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
GH V V P LG+ DR+ RLW + + +L GHS V + F +
Sbjct: 317 DIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDG 376
Query: 216 DLVLSASGDKSVHIW 230
L + D +W
Sbjct: 377 SLAGTGGLDAFGRVW 391
Score = 78 (32.5 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 301
+P+K L GH V+ D SDG+ + T S+DR L+ E
Sbjct: 482 SPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 521
Score = 52 (23.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 261 RTPVKELLGHSNVVIAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL 319
R V + H N+V + G+ ++T ++D A ++ + L++L GH+ + L
Sbjct: 438 RRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGL 497
Query: 320 CVSS 323
+SS
Sbjct: 498 DISS 501
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 163 (62.4 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 65/240 (27%), Positives = 106/240 (44%)
Query: 135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK 194
++ +I ++++ L K+ GH D V G ++ S S D T+++WS TGK
Sbjct: 278 IRQHRIDTNWRRGELRSPKV--LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGK 334
Query: 195 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXX------ 248
C+ GH+G V S + N +++S S D+++ +W A EC
Sbjct: 335 CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG-ECIHTLYGHTSTVRCMHL 391
Query: 249 -ESKEPDES-SITLRTPVKE-------LLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
E + S TLR E L+GH V + DG +V++ ++D + ++D
Sbjct: 392 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 449
Query: 300 VETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS 359
ET T L +L GH + L + VS L I+ D T N IH++ Q + S
Sbjct: 450 PETETCLHTLQGHTNRVYSLQFDGIHV-VSGSLDTSIRVWDVETG-NCIHTLTGHQSLTS 507
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 164 (62.8 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 65/240 (27%), Positives = 106/240 (44%)
Query: 135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK 194
++ +I ++++ L K+ GH D V G ++ S S D T+++WS TGK
Sbjct: 356 IRQHRIDTNWRRGELKSPKV--LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGK 412
Query: 195 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXX------ 248
C+ GH+G V S + N +++S S D+++ +W A EC
Sbjct: 413 CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG-ECIHTLYGHTSTVRCMHL 469
Query: 249 -ESKEPDES-SITLRTPVKE-------LLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
E + S TLR E L+GH V + DG +V++ ++D + ++D
Sbjct: 470 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 527
Query: 300 VETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS 359
ET T L +L GH + L + VS L I+ D T N IH++ Q + S
Sbjct: 528 PETETCLHTLQGHTNRVYSLQFDGIHV-VSGSLDTSIRVWDVETG-NCIHTLTGHQSLTS 585
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 44/160 (27%), Positives = 67/160 (41%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH VWD P S DR RLW+T + + ++GH VN RF PN +
Sbjct: 581 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640
Query: 217 LVLSASGDKSVHIWQAVINWECXXXXXXXXX---XESKEPD---------ESSITL---- 260
V + S D++V +W V+N C + P+ + + L
Sbjct: 641 YVATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 699
Query: 261 -RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
V EL GH++ V + + DGE + + S D L+D
Sbjct: 700 HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 143 (55.4 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GH V P + + SADRTVRLW G CV ++GH G ++S+ F P
Sbjct: 620 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 679
Query: 214 NKDLVLSASGDKSVHIW 230
N + + + D V +W
Sbjct: 680 NGRFLATGATDGRVLLW 696
Score = 124 (48.7 bits), Expect = 0.00017, P = 0.00017
Identities = 37/133 (27%), Positives = 59/133 (44%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GH+ + + P L + + D V LW G V + GH+ +V S+RF
Sbjct: 662 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 721
Query: 214 NKDLVLSASGDKSVHIWQAVINWE-CXXXXXXXXXXESKEPDESS-------ITLRTPVK 265
+ +++ S S D +V +W AV +E P+ S +T TPV
Sbjct: 722 DGEILASGSMDNTVRLWDAVKAFEDVETDDFTTATGHINLPENSQELLLGTYMTKSTPVV 781
Query: 266 EL-LGHSNVVIAA 277
L N+V+AA
Sbjct: 782 HLHFTRRNLVLAA 794
Score = 121 (47.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
+++ GH V+ + P + L S+S D TVRLWS QT C++ Y GH+ V +F
Sbjct: 535 ELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 594
Query: 213 PNKDLVLSASGDKSVHIW 230
P +S D+ +W
Sbjct: 595 PYGYYFVSGGHDRVARLW 612
Score = 67 (28.6 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 24/74 (32%), Positives = 34/74 (45%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITAS-------WDRVANLFDVETGTILQSLTGH---D 313
V EL GH++ V + + DGE + + S WD V DVET + TGH
Sbjct: 704 VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDVETDDFTTA-TGHINLP 762
Query: 314 EEPHILCVSSYYSK 327
E L + +Y +K
Sbjct: 763 ENSQELLLGTYMTK 776
Score = 50 (22.7 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
V+ GH + + + +G + T + D L+D+ G ++ L GH +
Sbjct: 662 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 712
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 164 (62.8 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 65/240 (27%), Positives = 106/240 (44%)
Query: 135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK 194
++ +I ++++ L K+ GH D V G ++ S S D T+++WS TGK
Sbjct: 361 IRQHRIDTNWRRGELKSPKV--LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGK 417
Query: 195 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXX------ 248
C+ GH+G V S + N +++S S D+++ +W A EC
Sbjct: 418 CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG-ECIHTLYGHTSTVRCMHL 474
Query: 249 -ESKEPDES-SITLRTPVKE-------LLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
E + S TLR E L+GH V + DG +V++ ++D + ++D
Sbjct: 475 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 532
Query: 300 VETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS 359
ET T L +L GH + L + VS L I+ D T N IH++ Q + S
Sbjct: 533 PETETCLHTLQGHTNRVYSLQFDGIHV-VSGSLDTSIRVWDVETG-NCIHTLTGHQSLTS 590
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 161 (61.7 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 61/218 (27%), Positives = 86/218 (39%)
Query: 121 NPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSA 179
N S + TT L SK K + +K+ R SGH V V V PG S
Sbjct: 145 NSSKGEDNTTRSLL--PSKAPMMMKPKWHAPWKLYRVASGHTGWVRAVDVEPGNQWFASG 202
Query: 180 SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECX 239
ADR +++W +G+ L +GH SV +V+ P + S DK V W N
Sbjct: 203 GADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEYNKVIR 262
Query: 240 XXXXXXXXXE--SKEPD-ESSIT-----------LRTPVKE--LLGHSNVVIAADWLSDG 283
+ S P + +T +RT + GH+N V S
Sbjct: 263 HYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQSVD 322
Query: 284 EQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCV 321
QVITAS D L+D+ G + +LT H + L +
Sbjct: 323 PQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTI 360
Score = 117 (46.2 bits), Expect = 0.00054, P = 0.00054
Identities = 37/141 (26%), Positives = 69/141 (48%)
Query: 94 EKYPECNDME---CVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLS 150
+K +C D+E + + + + + + L+ +PS L T + T++ V +T
Sbjct: 247 DKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTC--ARDSTAR-VWDMRTKA-- 301
Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210
++ F+GH + V DV + P + +AS D TVRLW G+ + + H SV ++
Sbjct: 302 --QVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRALT 359
Query: 211 FLPNKDLVLSASGDKSVHIWQ 231
P ++ SAS D ++ W+
Sbjct: 360 IHPRLNMFASASPD-NIKQWK 379
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 171 (65.3 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 57/198 (28%), Positives = 92/198 (46%)
Query: 121 NPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS 180
+P +Q L + ++ T+++ S S L CYK GH VWDV+ P +AS
Sbjct: 688 SPDSQYLLSCSE--DTTARLWSMETMSNLVCYK-----GHNFPVWDVSFSPFGFYFATAS 740
Query: 181 ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECXX 240
DRT RLW+T + ++GH N+VRF PN + + + S DKS +W+ + +C
Sbjct: 741 HDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWE-IQTGKCVR 799
Query: 241 XXXXXXX---XESKEPD---------ESSITL-----RTPVKELLGHSNVVIAADWLSDG 283
+ PD ++S+ L VK++ GH+ V + D+ DG
Sbjct: 800 IFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDG 859
Query: 284 EQVITASWDRVANLFDVE 301
+ + S D L+DV+
Sbjct: 860 SILASGSSDCTVRLWDVK 877
Score = 131 (51.2 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 40/124 (32%), Positives = 58/124 (46%)
Query: 107 NMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWD 166
N N+N NK +N ++ ++NKL+ Q + S FKT F GH V+
Sbjct: 638 NNNEN-NKSTTANNNLNSGSSSSSNKLQKQQKE--SEFKT----------FLGHSGPVYG 684
Query: 167 VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS 226
+ P L S S D T RLWS +T ++ Y GH+ V V F P +AS D++
Sbjct: 685 CSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRT 744
Query: 227 VHIW 230
+W
Sbjct: 745 ARLW 748
Score = 69 (29.3 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 20/68 (29%), Positives = 31/68 (45%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSS 323
V+ +GH + + DG + TA D L+D+ TG ++ + GH + CV
Sbjct: 798 VRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTK-----CV-- 850
Query: 324 YYSKVSCD 331
Y SCD
Sbjct: 851 YSLDFSCD 858
Score = 37 (18.1 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 2 PQSDTMSQKSTKHKRTASGKLSNLGDQDLSMLRTHLN 38
P D + +T ++ + NLG D L +L+
Sbjct: 228 PSDDEATNTTTTNQTNINTVTDNLGSSDDQELAQYLH 264
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 131 (51.2 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 24/83 (28%), Positives = 44/83 (53%)
Query: 154 IRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
I + SGH G+ D+ P +L S S D T+RLW+ +C+ H+ + +++F
Sbjct: 61 ITTLSGHTKGISDIVYSPINSNILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFT 120
Query: 213 PNKDLVLSASGDKSVHIWQAVIN 235
++++S S D+++ IW N
Sbjct: 121 QKGNILISGSSDETITIWDITSN 143
Score = 94 (38.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/82 (24%), Positives = 45/82 (54%)
Query: 152 YKIRSFSGHRDGVWDVAVR--PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 209
YKIR ++ + + A++ P +S++ + +++T TGK + SGH+ ++ +
Sbjct: 16 YKIR-YTINEPSITFTAIKFSPNGQNFACSSSNGKIYIYNTTTGKLITTLSGHTKGISDI 74
Query: 210 RFLP-NKDLVLSASGDKSVHIW 230
+ P N +++ S S D ++ +W
Sbjct: 75 VYSPINSNILASCSDDLTIRLW 96
Score = 70 (29.7 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 310
L HS+ V + D +++AS+D + LFD++T L++LT
Sbjct: 151 LAAHSDPVSSIALTPDDSIIVSASYDGLMRLFDLQTSQCLKTLT 194
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 131 (51.2 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
GH GV+D+A + G+ D R+W +TG+C++ GH + + F PN V
Sbjct: 362 GHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHV 421
Query: 219 LSASGDKSVHIW 230
+ SGD + +W
Sbjct: 422 ATGSGDNTCKVW 433
Score = 98 (39.6 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I GH ++ + P + + S D T ++W + KC+ H V V+F P
Sbjct: 399 IMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEP 458
Query: 214 NK-DLVLSASGDKSVHIW 230
N + +L+ + D + IW
Sbjct: 459 NHGNFLLTGAYDNTAKIW 476
Score = 86 (35.3 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 31/135 (22%), Positives = 50/135 (37%)
Query: 97 PECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKT-SLLSCYKIR 155
P+CN + + + N + +P A + + + S K SL S +
Sbjct: 260 PDCNLVHTLRGHSTNVG---AIVFHPKATVSLDKKDVNLASCAADGSVKLWSLESDEPVA 316
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
GH V V P LG+ D + RLW + + +L GHS V + F +
Sbjct: 317 DIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDG 376
Query: 216 DLVLSASGDKSVHIW 230
L + D +W
Sbjct: 377 SLAGTGGLDAFGRVW 391
Score = 74 (31.1 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 301
+P+K L GH V+ D DG+ + T S+DR L+ E
Sbjct: 482 SPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE 521
Score = 48 (22.0 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 11/45 (24%), Positives = 24/45 (53%)
Query: 270 HSNVVIAADWLSD-GEQVITASWDRVANLFDVETGTILQSLTGHD 313
H N+V + + G ++T ++D A ++ + L++L GH+
Sbjct: 447 HQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHE 491
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 163 (62.4 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 65/240 (27%), Positives = 106/240 (44%)
Query: 135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK 194
++ +I ++++ L K+ GH D V G ++ S S D T+++WS TGK
Sbjct: 409 IRQHRIDTNWRRGDLKSPKV--LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGK 465
Query: 195 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXX------ 248
C+ GH+G V S + N +++S S D+++ +W A EC
Sbjct: 466 CLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETG-ECIHTLYGHTSTVRCMHL 522
Query: 249 -ESKEPDES-SITLRTPVKE-------LLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
E + S TLR E L+GH V + DG +V++ ++D + ++D
Sbjct: 523 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 580
Query: 300 VETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQRIQHLDCGTSENPIHSVCVFQDIQS 359
ET T L +L GH + L + VS L I+ D T N IH++ Q + S
Sbjct: 581 PETETCLHTLQGHTNRVYSLQFDGIHV-VSGSLDTSIRVWDVETG-NCIHTLTGHQSLTS 638
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 156 (60.0 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 55/185 (29%), Positives = 81/185 (43%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R++SGH V D A L S D+TV LW TG+ V ++ GH+G VN+V+F
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNE 119
Query: 214 NKDLVLSASGDKSVHIW-------QAVINWECXXXXXXXXXXESKEPDESSITLRTPVKE 266
++LS S D SV W + V + E S+ R +
Sbjct: 120 EATVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVSDHEILAGSVDGRVRRYD 179
Query: 267 L-LGH--SNVV---IAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL 319
L +G S+ V I S DG+ + +S D L D +TG +L GH + + L
Sbjct: 180 LRMGQVSSDYVGSPITCTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQQYKL 239
Query: 320 --CVS 322
C+S
Sbjct: 240 DCCLS 244
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 156 (60.0 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 55/185 (29%), Positives = 81/185 (43%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R++SGH V D A L S D+TV LW TG+ V ++ GH+G VN+V+F
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNE 119
Query: 214 NKDLVLSASGDKSVHIW-------QAVINWECXXXXXXXXXXESKEPDESSITLRTPVKE 266
++LS S D SV W + V + E S+ R +
Sbjct: 120 EATVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVSDHEILAGSVDGRVRRYD 179
Query: 267 L-LGH--SNVV---IAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL 319
L +G S+ V I S DG+ + +S D L D +TG +L GH + + L
Sbjct: 180 LRMGQVTSDYVGSPITCTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQKYKL 239
Query: 320 --CVS 322
C+S
Sbjct: 240 DCCLS 244
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 150 (57.9 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 32/77 (41%), Positives = 44/77 (57%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWST-QTGKCVLQYSGHSGSVNSVRFLP 213
R+ GH D V D+A+ L S S+D +++LW QT C+ GH +V+SV FLP
Sbjct: 142 RTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLP 201
Query: 214 NKDLVLSASGDKSVHIW 230
D VLSAS D ++ W
Sbjct: 202 TGDFVLSASRDHTIKQW 218
Score = 128 (50.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 45/163 (27%), Positives = 68/163 (41%)
Query: 154 IRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
++S GH V V P G VL SAS D T++ W TG CV + GH+ V +R
Sbjct: 184 LKSLKGHEHTVSSVTFLPTGDFVL-SASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRIS 242
Query: 213 PNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKE--PDESSITLRTPVKELLGH 270
+ L SAS D++V +W E E PD + + E G+
Sbjct: 243 NDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPE--GN 300
Query: 271 SNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
S ++ + S DR +++ TG +L +L H+
Sbjct: 301 STHIL-----------FSGSRDRSIKAWNINTGDVLFTLLAHE 332
Score = 116 (45.9 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 25/85 (29%), Positives = 42/85 (49%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF-LP 213
+ +GHR + V P ++ S S D T+++W +TG+ GH+ +VN +
Sbjct: 100 QKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAA 159
Query: 214 NKDLVLSASGDKSVHIWQAVINWEC 238
K LV S S D S+ +W ++C
Sbjct: 160 GKQLV-SCSSDLSIKLWDFGQTYDC 183
Score = 86 (35.3 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 17/60 (28%), Positives = 34/60 (56%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSS 323
+K L GH + V + +L G+ V++AS D +D+ TG + + GH++ ++ +S+
Sbjct: 184 LKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISN 243
Score = 45 (20.9 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 9/47 (19%), Positives = 24/47 (51%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
LL H N V + G+ +I+ + D+ ++++ ++++ H+
Sbjct: 328 LLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHE 374
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 163 (62.4 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 33/80 (41%), Positives = 44/80 (55%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
GHR GVW V P +LGSASAD +VR+WS Q C+ + GH SV + F+ +
Sbjct: 524 GHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQL 583
Query: 219 LSASGDKSVHIWQAVINWEC 238
+S+ D V +W N EC
Sbjct: 584 VSSGSDGLVKLWTIKTN-EC 602
Score = 122 (48.0 bits), Expect = 0.00033, P = 0.00033
Identities = 32/87 (36%), Positives = 44/87 (50%)
Query: 153 KIRSFS-GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 211
K RS H V V V P +L S S DRT +LW+ + + GH V SV+F
Sbjct: 475 KARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQF 534
Query: 212 LPNKDLVLSASGDKSVHIWQAVINWEC 238
P ++ SAS D SV IW ++ ++ C
Sbjct: 535 SPVDQILGSASADGSVRIW-SIQDFSC 560
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 158 (60.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 43/170 (25%), Positives = 77/170 (45%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R+F GHRD + + P + S S D +V +W+ + +++GH +V V+F P+
Sbjct: 12 RNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPS 71
Query: 215 KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXES-----------KEPDESSITLRTP 263
L+ S+S DK+V +W + E S D+ SI L +
Sbjct: 72 AHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSV 131
Query: 264 VKE-----LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS 308
++ L H+N V A + DG+ +++ S DR L+D + ++ +
Sbjct: 132 HRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHT 181
Score = 134 (52.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 49/183 (26%), Positives = 76/183 (41%)
Query: 157 FSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
F H V V GQ +L +AS D++++LWS K + H+ V RF P+
Sbjct: 98 FRAHTGSVRSVCFSADGQSLL-TASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDG 156
Query: 216 DLVLSASGDKSVHIWQA----VINWECXXXXXXXXXX--------ESKEPDES----SIT 259
L++S S D++V +W A +I+ C + D + I
Sbjct: 157 QLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIR 216
Query: 260 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL 319
T ++ HS V A + G ++TAS D + D+ G +L +L GH
Sbjct: 217 THTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSAS-- 274
Query: 320 CVS 322
CVS
Sbjct: 275 CVS 277
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 155 (59.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 54/185 (29%), Positives = 81/185 (43%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R++SGH V D A L S D+ V LW +G+ V ++ GH+G VN+V+F
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNE 119
Query: 214 NKDLVLSASGDKSVHIW-------QAVINWECXXXXXXXXXXESKEPDESSITLRTPVKE 266
++LS S D SV W + V + E S+ R +
Sbjct: 120 EATVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVSDHEVLAGSVDGRVRRYD 179
Query: 267 L-LGH--SNVV---IAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL 319
L +G S+ V I S DG+ + +S D L D +TG +L TGH + + L
Sbjct: 180 LRMGQLFSDYVGSPITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKL 239
Query: 320 --CVS 322
C+S
Sbjct: 240 DCCLS 244
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 155 (59.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 53/185 (28%), Positives = 81/185 (43%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R++SGH V D A L S D+ V LW +G+ V ++ GH+G VN+V+F
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNE 119
Query: 214 NKDLVLSASGDKSVHIW-------QAVINWECXXXXXXXXXXESKEPDESSITLRTPVKE 266
++LS S D S+ W + V + E S+ R +
Sbjct: 120 EATVILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGISSVKVSDHEVLSGSVDGRVRRYD 179
Query: 267 L-LGH--SNVV---IAADWLS-DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL 319
L +G S+ V I S DG+ + +S D L D +TG +L TGH + + L
Sbjct: 180 LRMGQLFSDYVGSPITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKL 239
Query: 320 --CVS 322
C+S
Sbjct: 240 DCCLS 244
>UNIPROTKB|F1SGX1 [details] [associations]
symbol:CHAF1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497
"chromatin assembly" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005829 GO:GO:0005813 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 OMA:VYDICWT PRINTS:PR00319
EMBL:CU638724 ProteinModelPortal:F1SGX1 Ensembl:ENSSSCT00000013188
Uniprot:F1SGX1
Length = 559
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 48/173 (27%), Positives = 78/173 (45%)
Query: 176 LGSASADRTVRLWSTQTG---KCVLQY----SGHSGSVNSVRFLPNKDLVLSASGDKSVH 228
L SA D TVR+W + G K ++++ + H+ +VN VRF PN +++ S D +
Sbjct: 32 LASAGVDTTVRIWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPNGEILASGGDDAVIL 91
Query: 229 IWQAVINWECXXXXXXXXXXESKEPDESSITLR--TPVKELLGHSNVVIAADWLSDGEQV 286
+W+ N E ++ DE+ + T VK L GH V W +DG +
Sbjct: 92 LWKVNDNKEPEQIAF-------QDEDEAQLNKENWTVVKTLRGHLEDVYDICWAADGNVM 144
Query: 287 ITASWDRVANLFDVETGTILQSLTGHDEEPHILC---VSSYYSKVSCDLFQRI 336
+AS D A ++DV G + H + + Y + +SCD R+
Sbjct: 145 ASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWDPLGQYVATLSCDRILRV 197
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 158 (60.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 45/148 (30%), Positives = 67/148 (45%)
Query: 168 AVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKS 226
AV P + L S S D T+ LW KCV + +GH VN V++ P+ L+ SAS DKS
Sbjct: 339 AVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKS 398
Query: 227 VHIWQA-------VINWECXXXXXXXXXXESK-----EPDES----SITLRTPVKELLGH 270
V +W+A +S+ D + S+ + +EL GH
Sbjct: 399 VRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGH 458
Query: 271 SNVVIAADWLSDGEQVITASWDRVANLF 298
++ V DW DG +V + D+V L+
Sbjct: 459 ADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 125 (49.1 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+ +GH++ V DV P ++ SAS D++VRLW G+ + + GH +V +V +
Sbjct: 368 VERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSA 427
Query: 214 NKDLVLSASGDKSVHIW 230
+ L++S S D ++ +W
Sbjct: 428 DSRLIVSGSKDSTLKVW 444
Score = 122 (48.0 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 28/85 (32%), Positives = 48/85 (56%)
Query: 153 KIRSFSGHRDGV----WDVAVR-PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 207
K R SGH+ + W+ R P L SAS D R+W + G+C++ +GH+ +V
Sbjct: 196 KGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNAVT 255
Query: 208 SVRFLPNKDLVLSASGDKSVHIWQA 232
+VR+ L+ ++S D++V +W+A
Sbjct: 256 AVRW-GGAGLIYTSSKDRTVKMWRA 279
Score = 118 (46.6 bits), Expect = 0.00041, P = 0.00041
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+F GH V+ VA ++ S S D T+++WS QT K + GH+ V V + P+
Sbjct: 412 TFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDG 471
Query: 216 DLVLSASGDKSVHIW 230
V S DK + +W
Sbjct: 472 SRVASGGKDKVIKLW 486
Score = 86 (35.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 24/75 (32%), Positives = 31/75 (41%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
S GH + V + P L S S D TVRLW T +GH V V + P+
Sbjct: 114 SMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDG 173
Query: 216 DLVLSASGDKSVHIW 230
+ S S+ IW
Sbjct: 174 KRLASGCKAGSIIIW 188
Score = 77 (32.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
GH V W +D +++ S D ++ V+T + Q L GH +E
Sbjct: 415 GHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADE 461
Score = 72 (30.4 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYY 325
+ GH+N V A W G + T+S DR ++ G + ++ +GH + + +S+ Y
Sbjct: 247 IAGHTNAVTAVRWGGAG-LIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTDY 304
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 135 (52.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR + GH GV+ +++ P +L S D VR+W +T V SGH+G+V S+
Sbjct: 363 IRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQS 422
Query: 214 NKDLVLSASGDKSVHIWQAVINWEC 238
+ V+S S DK + +W + N +C
Sbjct: 423 VEPQVVSGSQDKMIRLWD-LNNGKC 446
Score = 121 (47.7 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 24/83 (28%), Positives = 38/83 (45%)
Query: 148 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 207
L SC + +GH + + D+ + P L S D V+ W + K + Y GH V
Sbjct: 315 LASCKLKLTLTGHINSIRDIKISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVY 374
Query: 208 SVRFLPNKDLVLSASGDKSVHIW 230
+ P+ DL++S D V +W
Sbjct: 375 CLSLHPSLDLLMSGGRDAVVRVW 397
Score = 91 (37.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 36/146 (24%), Positives = 56/146 (38%)
Query: 93 NEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLK-VQTSKIVSSFKTSLLSC 151
N P ND + + N N N N + S + +++ LK ++T I K
Sbjct: 218 NSLLPYTNDGK-INNTN-NLNNFGPIIKK-SDDNILSSDVLKHIKTLDIHKKIKKPKWHF 274
Query: 152 -YKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 209
YK+ R GH V V V + S DR +++W + K L +GH S+ +
Sbjct: 275 PYKLYRVILGHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDI 334
Query: 210 RFLPNKDLVLSASGDKSVHIWQAVIN 235
+ + S D V W N
Sbjct: 335 KISKKNPYLFSCGEDNRVKCWDLEYN 360
Score = 81 (33.6 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 258 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPH 317
I ++ V L GH+ V++ S QV++ S D++ L+D+ G SLT H +
Sbjct: 399 IRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSIR 458
Query: 318 ILCVSSY-YSKVSC 330
L + + YS SC
Sbjct: 459 SLSIHPFEYSFCSC 472
Score = 40 (19.1 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 12/44 (27%), Positives = 18/44 (40%)
Query: 107 NMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLS 150
N N N N + L + K+ TN L I+ ++LS
Sbjct: 209 NNNNNVNTENSLLPYTNDGKINNTNNLN-NFGPIIKKSDDNILS 251
Score = 37 (18.1 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 8/38 (21%), Positives = 21/38 (55%)
Query: 78 KIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQ 115
+I +L E D +++IN++ E + + N+ +++
Sbjct: 59 RITILDEDNDDDNVINKELKEISTLALSDGNNRKTHEE 96
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 135 (52.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR + GH GV+ +++ P +L S D VR+W +T V SGH+G+V S+
Sbjct: 363 IRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQS 422
Query: 214 NKDLVLSASGDKSVHIWQAVINWEC 238
+ V+S S DK + +W + N +C
Sbjct: 423 VEPQVVSGSQDKMIRLWD-LNNGKC 446
Score = 121 (47.7 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 24/83 (28%), Positives = 38/83 (45%)
Query: 148 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 207
L SC + +GH + + D+ + P L S D V+ W + K + Y GH V
Sbjct: 315 LASCKLKLTLTGHINSIRDIKISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVY 374
Query: 208 SVRFLPNKDLVLSASGDKSVHIW 230
+ P+ DL++S D V +W
Sbjct: 375 CLSLHPSLDLLMSGGRDAVVRVW 397
Score = 91 (37.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 36/146 (24%), Positives = 56/146 (38%)
Query: 93 NEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLK-VQTSKIVSSFKTSLLSC 151
N P ND + + N N N N + S + +++ LK ++T I K
Sbjct: 218 NSLLPYTNDGK-INNTN-NLNNFGPIIKK-SDDNILSSDVLKHIKTLDIHKKIKKPKWHF 274
Query: 152 -YKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 209
YK+ R GH V V V + S DR +++W + K L +GH S+ +
Sbjct: 275 PYKLYRVILGHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDI 334
Query: 210 RFLPNKDLVLSASGDKSVHIWQAVIN 235
+ + S D V W N
Sbjct: 335 KISKKNPYLFSCGEDNRVKCWDLEYN 360
Score = 81 (33.6 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 258 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPH 317
I ++ V L GH+ V++ S QV++ S D++ L+D+ G SLT H +
Sbjct: 399 IRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHHKKSIR 458
Query: 318 ILCVSSY-YSKVSC 330
L + + YS SC
Sbjct: 459 SLSIHPFEYSFCSC 472
Score = 40 (19.1 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 12/44 (27%), Positives = 18/44 (40%)
Query: 107 NMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLS 150
N N N N + L + K+ TN L I+ ++LS
Sbjct: 209 NNNNNVNTENSLLPYTNDGKINNTNNLN-NFGPIIKKSDDNILS 251
Score = 37 (18.1 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 8/38 (21%), Positives = 21/38 (55%)
Query: 78 KIDMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQ 115
+I +L E D +++IN++ E + + N+ +++
Sbjct: 59 RITILDEDNDDDNVINKELKEISTLALSDGNNRKTHEE 96
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 158 (60.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 211
Y +R ++GH GV V P L + S D+TVRLWS Q G V ++GH G V + F
Sbjct: 414 YPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAF 473
Query: 212 LPNKDLVLSASGDKSVHIW 230
PN ++SA D+ + +W
Sbjct: 474 SPNGQYLVSAGEDQLLKLW 492
Score = 148 (57.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 100 NDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFS- 158
ND V ++ ++KVL + + +T L +S ++S + + + + + SF+
Sbjct: 317 NDTLEVDEEDRTATERKVLLGH--CGPVYSTRFLP-DSSALLSCSEDTSIRYWDLESFTN 373
Query: 159 -----GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
GH VWD+ + P SAS D T RLWS + Y+GH V+ V+F P
Sbjct: 374 TVLYQGHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHP 433
Query: 214 NKDLVLSASGDKSVHIWQA 232
N + + + S DK+V +W A
Sbjct: 434 NSNYLATGSTDKTVRLWSA 452
Score = 148 (57.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 42/162 (25%), Positives = 69/162 (42%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH VWD+ + P SAS D T RLWS + Y+GH V+ V+F PN +
Sbjct: 377 YQGHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSN 436
Query: 217 LVLSASGDKSVHIWQAVIN------------WECXXXXXXXXXXESKEPDES----SITL 260
+ + S DK+V +W A C S D+ +
Sbjct: 437 YLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLAS 496
Query: 261 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVET 302
T K+L GH++ + + + D + +AS D ++D+++
Sbjct: 497 GTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKS 538
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 27/77 (35%), Positives = 39/77 (50%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GH V +A P L SA D+ ++LW +G GH+ + SV F
Sbjct: 458 VRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSL 517
Query: 214 NKDLVLSASGDKSVHIW 230
+ ++ SAS D SV IW
Sbjct: 518 DSSVIASASMDNSVRIW 534
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 144 (55.7 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 44/160 (27%), Positives = 67/160 (41%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH VWD P S DR RLW+T + + ++GH VN RF PN +
Sbjct: 341 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 400
Query: 217 LVLSASGDKSVHIWQAVINWECXXXXXXXXX---XESKEPD---------ESSITL---- 260
V + S D++V +W V+N C + P+ + + L
Sbjct: 401 YVATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 459
Query: 261 -RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
V EL GH++ V + + DGE + + S D L+D
Sbjct: 460 HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 143 (55.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GH V P + + SADRTVRLW G CV ++GH G ++S+ F P
Sbjct: 380 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 439
Query: 214 NKDLVLSASGDKSVHIW 230
N + + + D V +W
Sbjct: 440 NGRFLATGATDGRVLLW 456
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 26/84 (30%), Positives = 44/84 (52%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GH+ + + P L + + D V LW G V + GH+ +V S+RF
Sbjct: 422 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 481
Query: 214 NKDLVLSASGDKSVHIWQAVINWE 237
+ +++ S S D +V +W AV +E
Sbjct: 482 DGEILASGSMDNTVRLWDAVKAFE 505
Score = 121 (47.7 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
+++ GH V+ + P + L S+S D TVRLWS QT C++ Y GH+ V +F
Sbjct: 295 ELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 354
Query: 213 PNKDLVLSASGDKSVHIW 230
P +S D+ +W
Sbjct: 355 PYGYYFVSGGHDRVARLW 372
Score = 57 (25.1 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITAS-------WDRVANLFDVETGTILQSLTG 311
V EL GH++ V + + DGE + + S WD V D+ET + L G
Sbjct: 464 VGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDNSQELLLG 518
Score = 50 (22.7 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
V+ GH + + + +G + T + D L+D+ G ++ L GH +
Sbjct: 422 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 472
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 155 (59.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 49/173 (28%), Positives = 72/173 (41%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNK 215
F+GH+D V V P +L S S D+TVR+W G+ + + H+ +V SV F +
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTV-FRAHTATVRSVHFCSDG 115
Query: 216 DLVLSASGDKSVHIWQAV-----------INW-ECXXXXXXXXXXESKEPDES----SIT 259
+++AS DK+V +W INW C S D++ T
Sbjct: 116 QSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKT 175
Query: 260 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
R V H V D+ G + AS D ++DV T +LQ H
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLH 228
Score = 135 (52.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 45/174 (25%), Positives = 67/174 (38%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R F GHRD + V L S S D + +W + +++GH +V V F P+
Sbjct: 13 RHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPS 72
Query: 215 KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKE--PDESSITLRTPVK------- 265
L+ S S DK+V IW + E S D S+ + K
Sbjct: 73 GHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 266 -------ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
L H N V A + DG +++AS D+ L+D + + S H
Sbjct: 133 HRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 186
Score = 129 (50.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 47/159 (29%), Positives = 71/159 (44%)
Query: 172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231
GQ ++ +AS D+TV++WST K + S H V RF P+ L++SAS DK+V +W
Sbjct: 115 GQSLV-TASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD 173
Query: 232 AV----INWECXXXXXXXXXXESKEPDESSI---TLRTPVK-------ELLGH----SNV 273
++ C P + I ++ VK LL H S
Sbjct: 174 KTSRECVHSYCEHGGFVTYV--DFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAA 231
Query: 274 VIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
V A + G ++TAS D + D+ G +L +L GH
Sbjct: 232 VNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGH 270
Score = 118 (46.6 bits), Expect = 0.00031, P = 0.00031
Identities = 27/75 (36%), Positives = 39/75 (52%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
S S H + V P ++ SAS D+TV+LW + +CV Y H G V V F P+
Sbjct: 140 SLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 216 DLVLSASGDKSVHIW 230
+ +AS D +V +W
Sbjct: 200 TCIAAASMDNTVKVW 214
Score = 117 (46.2 bits), Expect = 0.00040, P = 0.00040
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 145 KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG 204
KTS C + S+ H V V P + +AS D TV++W +T + + Y HS
Sbjct: 174 KTSR-EC--VHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSA 230
Query: 205 SVNSVRFLPNKDLVLSASGDKSVHI 229
+VN++ F P+ + +L+AS D ++ I
Sbjct: 231 AVNALSFHPSGNYLLTASSDSTLKI 255
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 159 (61.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 51/189 (26%), Positives = 83/189 (43%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
++ GH V+ + P L S S D+TVRLWS T ++ Y GH+ V V F P
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 215 KDLVLSASGDKSVHIWQA------------VINWECXXXXXXXXXXESKEPDES----SI 258
+AS D++ +W + + +C + D++ +
Sbjct: 579 GHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDV 638
Query: 259 TLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI 318
+ V+ LGH+ VI+ DG + T S D + N++D+ TG L+ + GH + I
Sbjct: 639 STGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNA-I 697
Query: 319 LCVSSYYSK 327
+S YSK
Sbjct: 698 YSLS--YSK 704
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 148 LLSC---YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG 204
L SC Y +R F+GH + V V+ P + + S+D+T R+W TG V + GH+
Sbjct: 593 LWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTA 652
Query: 205 SVNSVRFLPNKDLVLSASGDKSVHIW 230
V S+ P+ + + S D +++W
Sbjct: 653 PVISIAVCPDGRWLSTGSEDGIINVW 678
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 146 (56.5 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ GH VW + SAS D T ++W + +C GH+ SVNS+ F P
Sbjct: 439 TLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFS 498
Query: 216 DLVLSASGDKSVHIWQA 232
+++L+AS DK++ +W A
Sbjct: 499 NILLTASADKTLSVWDA 515
Score = 126 (49.4 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 25/72 (34%), Positives = 35/72 (48%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
GH D V + P +L +ASAD+T+ +W +TGKC GH SVN F P ++
Sbjct: 484 GHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHII 543
Query: 219 LSASGDKSVHIW 230
S +W
Sbjct: 544 ASCDARGVTKLW 555
Score = 117 (46.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 26/73 (35%), Positives = 36/73 (49%)
Query: 158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 217
SGH D + P L ++S D T++LW G+C L GH+ +V S + D
Sbjct: 399 SGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDF 458
Query: 218 VLSASGDKSVHIW 230
V SAS D + IW
Sbjct: 459 VASASLDMTSKIW 471
Score = 55 (24.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 283 GEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
G + AS + + +L D+++G I L GH+ E H + S
Sbjct: 582 GRVLAQASANGIIHLLDLKSGQI-HKLVGHESEVHSVVFS 620
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 129 (50.5 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 34/124 (27%), Positives = 51/124 (41%)
Query: 113 NKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRP 171
++ + A N + T + K + K +K+ R SGH V +AV P
Sbjct: 155 DRSQPTAMNSMIMETSNTKNSALMAKKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEP 214
Query: 172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231
G + SADRT+++W +GK L +GH +V V + S DK V W
Sbjct: 215 GNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWD 274
Query: 232 AVIN 235
N
Sbjct: 275 LEYN 278
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR + GH V+ + + P VL + S D T R+W +T V SGH+ +V +VR
Sbjct: 281 IRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQA 340
Query: 214 NKDLVLSASGDKSVHIWQAV 233
+ +++ S D ++ +W V
Sbjct: 341 AEPQIITGSHDTTIRLWDLV 360
Score = 110 (43.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 149 LSCYKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 207
L+ K++ S +GH V V V P L S D+ V+ W + K + Y GH +V
Sbjct: 233 LASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVY 292
Query: 208 SVRFLPNKDLVLSASGDKSVHIW 230
+ P D++++ S D + IW
Sbjct: 293 GLDLHPTIDVLVTCSRDSTARIW 315
Score = 71 (30.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 258 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+ + V L GH+N V + Q+IT S D L+D+ G +LT H
Sbjct: 317 VRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNH 371
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 139 (54.0 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 27/78 (34%), Positives = 42/78 (53%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
KI FS H V V+V P + S + D T +LW ++GKCV ++GH +N+V++
Sbjct: 183 KITEFSDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYF 242
Query: 213 PNKDLVLSASGDKSVHIW 230
PN + S D S ++
Sbjct: 243 PNGLSFGTGSDDASCRLF 260
Score = 54 (24.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLF 298
V L GH N V +DG + T SWD + ++
Sbjct: 312 VLSLTGHGNRVSCLGVPTDGMALCTGSWDSLLKIW 346
Score = 45 (20.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 270 HSNVV--IAADWLSDGEQVITASWDR-VANLFDVETGTILQSLTGH 312
H N++ I + S + + A +D N++D G + SLTGH
Sbjct: 273 HDNILCGITSVGFSFSGRFLFAGYDDFTCNVWDTLKGERVLSLTGH 318
>UNIPROTKB|G5EI73 [details] [associations]
symbol:MGCH7_ch7g141 "Serine-threonine kinase
receptor-associated protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016301 EMBL:CM000230
EMBL:CM001237 KO:K13137 RefSeq:XP_003721358.1
ProteinModelPortal:G5EI73 EnsemblFungi:MGG_10588T0 GeneID:2682201
KEGG:mgr:MGG_10588 Uniprot:G5EI73
Length = 351
Score = 153 (58.9 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 44/163 (26%), Positives = 74/163 (45%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I +F GH+ VW + P +ASAD + ++W++ TG+ VL H V ++ + P
Sbjct: 57 IGTFIGHKGAVWQAKLSPDMSNAATASADFSCKIWNSHTGE-VLFTLKHEHIVRAIAYPP 115
Query: 214 N-KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRT-PVKELLGHS 271
N D+V + +K + +W + ES E E T P+K ++
Sbjct: 116 NTSDMVATGGFEKKLRLWDLQAASKKLAETTEEVAVESSEAHEIGAGTHTDPIKAIV--- 172
Query: 272 NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
W D ++ITAS + FDV T +++++L DE
Sbjct: 173 -------WAPDPTKIITAS-GKTLRWFDVPTKSLVKTLVLDDE 207
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 157 (60.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 58/218 (26%), Positives = 96/218 (44%)
Query: 121 NPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSAS 180
+PS KL T++ T K+ K C I +F GH VW + S+S
Sbjct: 403 HPSGDKLATSSG--DTTVKLWDLCKGD---C--ILTFEGHSRAVWSCTWHSCGNFVASSS 455
Query: 181 ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVIN-WECX 239
D+T ++W + +C GH+ SVNS+ F P + +L++S DK++ IW A E
Sbjct: 456 LDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQS 515
Query: 240 XXXXXXXXXESK-EP--------DESSITLRTPVKELLGHSNVVIA------ADWLSDGE 284
++ +P D +T ++LL ++ I ++ S G
Sbjct: 516 LYGHMHSINDAIFDPRGHMIASCDACGVTKLWDFRKLLPIVSIDIGPSPGNEVNFDSSGR 575
Query: 285 QVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
+ AS + V +L D+++G I L GH+ E H + S
Sbjct: 576 VLAQASGNGVIHLLDLKSGEI-HKLMGHENEAHTVVFS 612
Score = 126 (49.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 29/83 (34%), Positives = 42/83 (50%)
Query: 148 LLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 207
L C + + GH D + D P L ++S D TV+LW G C+L + GHS +V
Sbjct: 381 LPKCNVLLTGFGHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVW 440
Query: 208 SVRFLPNKDLVLSASGDKSVHIW 230
S + + V S+S DK+ IW
Sbjct: 441 SCTWHSCGNFVASSSLDKTSKIW 463
Score = 117 (46.2 bits), Expect = 0.00076, P = 0.00076
Identities = 46/181 (25%), Positives = 79/181 (43%)
Query: 152 YKIRS-FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ-TGKC--VLQYSGHSGSVN 207
YK+++ F H V V+++P + +L S DR LW KC +L GH+ ++
Sbjct: 342 YKLKNIFRLHELPVSCVSMQPHKDILVSCGEDR---LWKVLGLPKCNVLLTGFGHTDWLS 398
Query: 208 SVRFLPNKDLVLSASGDKSVHIWQ-----AVIN--------WECXXXXXXXXXXESKEPD 254
F P+ D + ++SGD +V +W ++ W C S
Sbjct: 399 DCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDK 458
Query: 255 ESSITLRTPVK---ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTG 311
S I + L GH++ V + ++ ++T+S D+ +++D TG QSL G
Sbjct: 459 TSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSLYG 518
Query: 312 H 312
H
Sbjct: 519 H 519
Score = 38 (18.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWD 292
+ +L+GH N + DGE + + D
Sbjct: 596 IHKLMGHENEAHTVVFSHDGEILFSGGSD 624
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 151 (58.2 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 47/185 (25%), Positives = 83/185 (44%)
Query: 149 LSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNS 208
L+ ++R + H V A P L +AS D V +W T++G+ + + +GH G V S
Sbjct: 14 LAVGRVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKS 73
Query: 209 VRFLPNKDLVLSASGDKSVHIWQA-------VINWECXXXXXXXXXXESKEP-----DES 256
F P+ L+ S+S D S+ +W V+ +SK+ D+
Sbjct: 74 CCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKR 133
Query: 257 SITLRTP----VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+I V L+GH + + ++D+ + + T SWD +++D+ T + S H
Sbjct: 134 AIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSY--H 191
Query: 313 DEEPH 317
+ E H
Sbjct: 192 NLEGH 196
Score = 98 (39.6 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 22/86 (25%), Positives = 41/86 (47%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY---SGHSGSVNSV 209
++ GH D + P L + S D TV +W + V+ Y GH+G+++ +
Sbjct: 144 RVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCL 203
Query: 210 RFLPNKDLVLSASGDKSVHIWQAVIN 235
+ + L+ S S DK++ +W+ N
Sbjct: 204 CYSAS-GLLASGSWDKTICVWKPTTN 228
Score = 56 (24.8 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 266 ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCV 321
+L GH+ V + + D ++ +A + R ++D TG L++L G + H C+
Sbjct: 233 QLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHA-CI 287
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 158 (60.7 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 38/94 (40%), Positives = 51/94 (54%)
Query: 147 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 206
+L C + FSGHR G+W V P VL +ASAD T++LW+ Q C+ + GH SV
Sbjct: 504 ALPHCQLLGIFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASV 563
Query: 207 NSVRFLPNKDLVLSA-SG-DKSVHIWQAVINWEC 238
V F+ +LS SG D V +W + N EC
Sbjct: 564 LKVVFVSRGTQLLSRPSGSDGLVKLW-TIKNNEC 596
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 156 (60.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 211
Y +R ++GH V V P L + S D+TVRLWSTQ G V ++GH G V S+ F
Sbjct: 413 YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAF 472
Query: 212 LPNKDLVLSASGDKSVHIW 230
PN + SA D+ + +W
Sbjct: 473 SPNGKYLASAGEDQRLKLW 491
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GHR V +A P L SA D+ ++LW +G + GH+ ++ S+ F P
Sbjct: 457 VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP 516
Query: 214 NKDLVLSASGDKSVHIW 230
+ LV SAS D SV +W
Sbjct: 517 DSSLVASASMDNSVRVW 533
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 45/175 (25%), Positives = 71/175 (40%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH VWD+ + P SAS DRT RLWS + Y+GH V+ V+F PN +
Sbjct: 376 YQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN 435
Query: 217 LVLSASGDKSVHIWQA---------------VINWECX-XXXXXXXXXESKEPDESSITL 260
+ + S DK+V +W V++ E + +
Sbjct: 436 YLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS 495
Query: 261 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
T KEL GH++ + + + D V +AS D ++D+ + G E
Sbjct: 496 GTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSE 550
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 151 (58.2 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 49/187 (26%), Positives = 82/187 (43%)
Query: 152 YKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210
YK+ + GH + P LG++SAD+TV++W+ C +GH VN +
Sbjct: 77 YKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 211 FLPNKDLVLSASGDKSVHIWQAVI-----------NWE-CXXXXXXXXXXESKEPDES-- 256
+ + V+SAS DK++ I++ V N+ C S DES
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 257 --SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
+ +K L HS+ V A + DG + + S+D + ++D G +++L DE
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVD-DE 255
Query: 315 EPHILCV 321
P + V
Sbjct: 256 NPPVAFV 262
Score = 127 (49.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 40/161 (24%), Positives = 71/161 (44%)
Query: 89 ESIINEKYPECNDMECVTNMNKN---FNKQKVLASNP-SAQKLKTTNKLKVQTSK-IVSS 143
+SI + K+ C ++ +K +N ++ + KL + S+ +VS+
Sbjct: 88 KSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSA 147
Query: 144 FKTSLLSCYKI------RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL 197
L ++I ++ GH + V+ P ++ S S D +VR+W +TG C+
Sbjct: 148 SDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIK 207
Query: 198 QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC 238
HS V++V F + L+ S S D V IW N +C
Sbjct: 208 TLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTA-NGQC 247
Score = 100 (40.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFL 212
I++ H D V V+ ++ S S D VR+W T G+C+ + V V+F
Sbjct: 206 IKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFS 265
Query: 213 PNKDLVLSASGDKSVHIW 230
PN +L+++ D ++ +W
Sbjct: 266 PNGKYILASNLDSTLKLW 283
Score = 67 (28.6 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 15/64 (23%), Positives = 32/64 (50%)
Query: 264 VKELLGHSNVVIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
+K L+ N +A + +G+ ++ ++ D L+D G L+ TGH+ + C+
Sbjct: 248 IKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKY--CIF 305
Query: 323 SYYS 326
+ +S
Sbjct: 306 ANFS 309
Score = 61 (26.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 264 VKELLGHSN--VVIAADW-LSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
+K+ GH N I A++ ++ G+ +I+ S D +++++T I+Q L GH +
Sbjct: 291 LKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQ 344
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 151 (58.2 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 49/187 (26%), Positives = 82/187 (43%)
Query: 152 YKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210
YK+ + GH + P LG++SAD+TV++W+ C +GH VN +
Sbjct: 77 YKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 211 FLPNKDLVLSASGDKSVHIWQAVI-----------NWE-CXXXXXXXXXXESKEPDES-- 256
+ + V+SAS DK++ I++ V N+ C S DES
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 257 --SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
+ +K L HS+ V A + DG + + S+D + ++D G +++L DE
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVD-DE 255
Query: 315 EPHILCV 321
P + V
Sbjct: 256 NPPVAFV 262
Score = 127 (49.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 40/161 (24%), Positives = 71/161 (44%)
Query: 89 ESIINEKYPECNDMECVTNMNKN---FNKQKVLASNP-SAQKLKTTNKLKVQTSK-IVSS 143
+SI + K+ C ++ +K +N ++ + KL + S+ +VS+
Sbjct: 88 KSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSA 147
Query: 144 FKTSLLSCYKI------RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL 197
L ++I ++ GH + V+ P ++ S S D +VR+W +TG C+
Sbjct: 148 SDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIK 207
Query: 198 QYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC 238
HS V++V F + L+ S S D V IW N +C
Sbjct: 208 TLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTA-NGQC 247
Score = 100 (40.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFL 212
I++ H D V V+ ++ S S D VR+W T G+C+ + V V+F
Sbjct: 206 IKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFS 265
Query: 213 PNKDLVLSASGDKSVHIW 230
PN +L+++ D ++ +W
Sbjct: 266 PNGKYILASNLDSTLKLW 283
Score = 67 (28.6 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 15/64 (23%), Positives = 32/64 (50%)
Query: 264 VKELLGHSNVVIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
+K L+ N +A + +G+ ++ ++ D L+D G L+ TGH+ + C+
Sbjct: 248 IKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKY--CIF 305
Query: 323 SYYS 326
+ +S
Sbjct: 306 ANFS 309
Score = 61 (26.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 264 VKELLGHSN--VVIAADW-LSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
+K+ GH N I A++ ++ G+ +I+ S D +++++T I+Q L GH +
Sbjct: 291 LKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQ 344
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 148 (57.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 52/187 (27%), Positives = 84/187 (44%)
Query: 152 YK-IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210
YK I + GH + V P LG++SAD+TV++W+ C +GH VN
Sbjct: 69 YKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFA 128
Query: 211 FLPNKDLVLSASGDKSVHIWQAVI-----------NWE-CXXXXXXXXXXESKEPDES-S 257
+ + +++AS DK++ I++ N+ C S DES
Sbjct: 129 WSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVR 188
Query: 258 I-TLRTP--VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
I +RT VK L HS+ V A + DG + + S+D + ++D G +++L DE
Sbjct: 189 IWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVD-DE 247
Query: 315 EPHILCV 321
P + V
Sbjct: 248 NPPVAFV 254
Score = 130 (50.8 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 45/163 (27%), Positives = 73/163 (44%)
Query: 89 ESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQT------SK-IV 141
+SI K+ C ++ +K + S+ S ++ T +KL V SK IV
Sbjct: 80 KSISAVKFSPCGKFLGTSSADKTVKIWNM--SDLSCERTLTGHKLGVNDFAWSADSKSIV 137
Query: 142 SSFKTSLLSCYKI------RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC 195
++ L Y++ ++ GH + V+ P ++ S S D +VR+W +TG C
Sbjct: 138 TASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMC 197
Query: 196 VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC 238
V HS V++V F + L+ S S D V IW N +C
Sbjct: 198 VKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTA-NGQC 239
Score = 101 (40.6 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-SGHSGSVNSVRFL 212
+++ H D V V+ ++ S S D VR+W T G+CV + V V+F
Sbjct: 198 VKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFS 257
Query: 213 PNKDLVLSASGDKSVHIW 230
PN +LS++ D ++ +W
Sbjct: 258 PNGKYILSSNLDNTLKLW 275
Score = 63 (27.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 16/54 (29%), Positives = 33/54 (61%)
Query: 264 VKELLGHSN--VVIAADW-LSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
+K+ GH N I A++ ++ G+ +I+ S D +++++T ++QSL GH +
Sbjct: 283 LKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQ 336
Score = 62 (26.9 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 15/64 (23%), Positives = 32/64 (50%)
Query: 264 VKELLGHSNVVIA-ADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
VK L+ N +A + +G+ +++++ D L+D G L+ GH+ + C+
Sbjct: 240 VKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKY--CIF 297
Query: 323 SYYS 326
+ +S
Sbjct: 298 ANFS 301
Score = 40 (19.1 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 264 VKELLGHSNVVIAAD 278
V+ L GH+ VIA+D
Sbjct: 328 VQSLEGHTQAVIASD 342
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 150 (57.9 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 47/173 (27%), Positives = 71/173 (41%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNK 215
F+GH+D V V P +L S S D+TVR+W G+ + + H+ +V SV F +
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV-FRAHTATVRSVHFCSDG 115
Query: 216 DLVLSASGDKSVHIWQAV-----------INW-ECXXXXXXXXXXESKEPDES----SIT 259
L+++AS DK+V +W INW C S D++ T
Sbjct: 116 QLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 260 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
R V H V D+ G + A D ++D T ++Q H
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLH 228
Score = 142 (55.0 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 45/174 (25%), Positives = 71/174 (40%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R F GHRD V V L S S D T+ +W + +++GH +V V F P+
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 215 KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKE-----------PDESSITLRTP 263
L+ S S DK+V IW + E S D+ ++ + +
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWST 132
Query: 264 VKE-----LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
++ L H N V A + DG +++AS D+ L+D + + S H
Sbjct: 133 HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 186
Score = 121 (47.7 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 31/106 (29%), Positives = 52/106 (49%)
Query: 126 KLKTTNKLKVQTS--KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADR 183
K +L V S K V + + C + S+ H V V P + +A D
Sbjct: 152 KFSPDGRLIVSASDDKTVKLWDKTSREC--VHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 184 TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229
TV++W T+T + V Y HS +VN++ F P+ + +++AS D ++ I
Sbjct: 210 TVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKI 255
Score = 121 (47.7 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 43/157 (27%), Positives = 71/157 (45%)
Query: 172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231
GQ +L +AS D+TV++WST + + + H V +F P+ L++SAS DK+V +W
Sbjct: 115 GQ-LLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 232 AV----INWECXXXXXXXXXXESKEPD-------ESSITL---RTP--VKELLGHSNVVI 275
++ C ++++ + RT V+ HS V
Sbjct: 174 KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVN 233
Query: 276 AADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
A + G +ITAS D + D+ G +L +L GH
Sbjct: 234 ALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGH 270
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 126 (49.4 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 28/81 (34%), Positives = 37/81 (45%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R SGH V +AV PG + SADRT+++W +GK L +GH +V V
Sbjct: 197 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTR 256
Query: 215 KDLVLSASGDKSVHIWQAVIN 235
+ S DK V W N
Sbjct: 257 SPYLFSCGEDKQVKCWDLEYN 277
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR + GH V+ + + P VL + S D T R+W +T V SGH+ +V +VR
Sbjct: 280 IRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQA 339
Query: 214 NKDLVLSASGDKSVHIWQAV 233
+ +++ S D ++ +W V
Sbjct: 340 AEPQIITGSHDTTIRLWDLV 359
Score = 111 (44.1 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 149 LSCYKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 207
L+ K++ S +GH V V V P L S D+ V+ W + K + Y GH +V
Sbjct: 232 LASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVY 291
Query: 208 SVRFLPNKDLVLSASGDKSVHIW 230
+ P D++++ S D + IW
Sbjct: 292 GLDLHPTLDVLVTCSRDSTARIW 314
Score = 71 (30.1 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 258 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+ + V L GH+N V + Q+IT S D L+D+ G +LT H
Sbjct: 316 VRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNH 370
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 126 (49.4 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 28/81 (34%), Positives = 37/81 (45%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R SGH V +AV PG + SADRT+++W +GK L +GH +V V
Sbjct: 197 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTR 256
Query: 215 KDLVLSASGDKSVHIWQAVIN 235
+ S DK V W N
Sbjct: 257 SPYLFSCGEDKQVKCWDLEYN 277
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR + GH V+ + + P VL + S D T R+W +T V SGH+ +V +VR
Sbjct: 280 IRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQA 339
Query: 214 NKDLVLSASGDKSVHIWQAV 233
+ +++ S D ++ +W V
Sbjct: 340 AEPQIITGSHDTTIRLWDLV 359
Score = 110 (43.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 149 LSCYKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 207
L+ K++ S +GH V V V P L S D+ V+ W + K + Y GH +V
Sbjct: 232 LASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVY 291
Query: 208 SVRFLPNKDLVLSASGDKSVHIW 230
+ P D++++ S D + IW
Sbjct: 292 GLDLHPTIDVLVTCSRDSTARIW 314
Score = 71 (30.1 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 258 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+ + V L GH+N V + Q+IT S D L+D+ G +LT H
Sbjct: 316 VRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNH 370
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 126 (49.4 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 28/81 (34%), Positives = 37/81 (45%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R SGH V +AV PG + SADRT+++W +GK L +GH +V V
Sbjct: 198 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTR 257
Query: 215 KDLVLSASGDKSVHIWQAVIN 235
+ S DK V W N
Sbjct: 258 SPYLFSCGEDKQVKCWDLEYN 278
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR + GH V+ + + P VL + S D T R+W +T V SGH+ +V +VR
Sbjct: 281 IRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQA 340
Query: 214 NKDLVLSASGDKSVHIWQAV 233
+ +++ S D ++ +W V
Sbjct: 341 AEPQIITGSHDTTIRLWDLV 360
Score = 110 (43.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 149 LSCYKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 207
L+ K++ S +GH V V V P L S D+ V+ W + K + Y GH +V
Sbjct: 233 LASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVY 292
Query: 208 SVRFLPNKDLVLSASGDKSVHIW 230
+ P D++++ S D + IW
Sbjct: 293 GLDLHPTIDVLVTCSRDSTARIW 315
Score = 71 (30.1 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 258 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+ + V L GH+N V + Q+IT S D L+D+ G +LT H
Sbjct: 317 VRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNH 371
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 126 (49.4 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 28/81 (34%), Positives = 37/81 (45%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R SGH V +AV PG + SADRT+++W +GK L +GH +V V
Sbjct: 199 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTR 258
Query: 215 KDLVLSASGDKSVHIWQAVIN 235
+ S DK V W N
Sbjct: 259 SPYLFSCGEDKQVKCWDLEYN 279
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR + GH V+ + + P VL + S D T R+W +T V SGH+ +V +VR
Sbjct: 282 IRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQA 341
Query: 214 NKDLVLSASGDKSVHIWQAV 233
+ +++ S D ++ +W V
Sbjct: 342 AEPQIITGSHDTTIRLWDLV 361
Score = 110 (43.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 149 LSCYKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 207
L+ K++ S +GH V V V P L S D+ V+ W + K + Y GH +V
Sbjct: 234 LASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVY 293
Query: 208 SVRFLPNKDLVLSASGDKSVHIW 230
+ P D++++ S D + IW
Sbjct: 294 GLDLHPTIDVLVTCSRDSTARIW 316
Score = 71 (30.1 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 258 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+ + V L GH+N V + Q+IT S D L+D+ G +LT H
Sbjct: 318 VRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNH 372
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 119 (46.9 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 169 VRPG-QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV 227
V+PG +P L S+S D T+++W T + C SGH+ SV+ V++ + L+ S S D++V
Sbjct: 243 VKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKW-GGQGLLYSGSHDRTV 301
Query: 228 HIWQAVINWEC 238
+W C
Sbjct: 302 RVWDINSQGRC 312
Score = 115 (45.5 bits), Expect = 0.00096, P = 0.00096
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 113 NKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYK-IRSFSGHRDGVWDVAVRP 171
N +K+ N +++++ T S + F + L K I +GH+ V VA P
Sbjct: 359 NYEKICKKNGNSEEMMVT------ASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSP 412
Query: 172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
+ SAS D +++LW + GK + + GH SV V + + L++S S D ++ +W
Sbjct: 413 DGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVW 471
Score = 103 (41.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 26/88 (29%), Positives = 45/88 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ-YSGHSGSVNSVRFL 212
+ + GH + V V+ P V+ + S D T+RLW ++G+C+ GHS + S+ +
Sbjct: 179 MHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWE 238
Query: 213 P-------NKDLVLSASGDKSVHIWQAV 233
P +K + S+S D ++ IW V
Sbjct: 239 PIHLVKPGSKPRLASSSKDGTIKIWDTV 266
Score = 78 (32.5 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 263 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
P+ + GH +V + DG +++AS+D L+D G + + GH
Sbjct: 394 PIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGH 443
Score = 67 (28.6 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
GH V W SD +++ S D ++DV T + L GH +E
Sbjct: 442 GHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDE 488
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 154 (59.3 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 61/248 (24%), Positives = 105/248 (42%)
Query: 114 KQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTS--LLSCYKIRSFSGHRDGVWDVAVRP 171
K+ +AS+ A + +T +KL +SKI T LS RSF GH D + P
Sbjct: 2 KKTTIASSAVASQKQTQSKLGNTSSKITEQQTTHDPALS----RSFRGHEDIITCADFDP 57
Query: 172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231
+ S S D V +W+ + + ++ GH G+V V++ P+ + + S D+ + +WQ
Sbjct: 58 KMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPDGETIASCGQDRQIRLWQ 117
Query: 232 AVINWECXXXXXXXXXXES-----------KEPDESSITL-RTPVKELL----GHSNVVI 275
+ +C S D+ ++ L R K+ + GH N V
Sbjct: 118 NTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVR 177
Query: 276 AADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKVSCDLFQR 335
+ D V + S D+ L+D+ I+ + D+ I ++SY + + Q
Sbjct: 178 SGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDT-VSQV 236
Query: 336 IQHLDCGT 343
+ H D GT
Sbjct: 237 LFHPD-GT 243
Score = 127 (49.8 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 31/105 (29%), Positives = 47/105 (44%)
Query: 128 KTTNKLKVQTSKIVSSFKT--SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTV 185
KT + KIVS + T + +I S+S H D V V P L S+S D +
Sbjct: 195 KTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKI 254
Query: 186 RLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
++ ++ K + Y+ H VNS+ P + SA D + IW
Sbjct: 255 KITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIW 299
Score = 127 (49.8 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 36/144 (25%), Positives = 66/144 (45%)
Query: 178 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 237
S+S D+T++LW Q K + ++GH V S P+ LV S S DK+V +W +N++
Sbjct: 148 SSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWD--LNFQ 205
Query: 238 CXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANL 297
S D I+ + H + V + DG +I++S+D +
Sbjct: 206 ------KIVSKYSTLDDNVKIS---QINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKI 256
Query: 298 FDVETGTILQSLTGHDEEPHILCV 321
D+ + ++Q HD + + + +
Sbjct: 257 TDIRSNKLIQHYNAHDAQVNSISI 280
>UNIPROTKB|A5D9H4 [details] [associations]
symbol:CHAF1B "Chromatin assembly factor 1 subunit B"
species:9913 "Bos taurus" [GO:0033186 "CAF-1 complex" evidence=IEA]
[GO:0031497 "chromatin assembly" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005829 GO:GO:0005813 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 HOGENOM:HOG000183312 KO:K10751
OMA:VYDICWT CTD:8208 OrthoDB:EOG4G4GQD PRINTS:PR00319
HOVERGEN:HBG050780 EMBL:DAAA02003568 EMBL:BT030593 IPI:IPI00852539
RefSeq:NP_001091483.1 UniGene:Bt.24966 STRING:A5D9H4
Ensembl:ENSBTAT00000015764 GeneID:511654 KEGG:bta:511654
InParanoid:A5D9H4 NextBio:20870035 Uniprot:A5D9H4
Length = 575
Score = 153 (58.9 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 47/173 (27%), Positives = 77/173 (44%)
Query: 176 LGSASADRTVRLWSTQTG---KCVLQY----SGHSGSVNSVRFLPNKDLVLSASGDKSVH 228
L SA D VR+W + G K ++++ + H+ +VN VRF PN +++ S D +
Sbjct: 32 LASAGVDTAVRVWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPNGEILASGGDDAVIL 91
Query: 229 IWQAVINWECXXXXXXXXXXESKEPDESSITLR--TPVKELLGHSNVVIAADWLSDGEQV 286
+W+ N E ++ DE+ + T VK L GH V W +DG +
Sbjct: 92 LWKVNDNKEPEQVAF-------QDEDEAQLNKENWTVVKTLRGHLEDVYDICWATDGNLM 144
Query: 287 ITASWDRVANLFDVETGTILQSLTGHDEEPHILC---VSSYYSKVSCDLFQRI 336
+AS D A ++DV G + H + + Y + +SCD R+
Sbjct: 145 ASASVDNTAIMWDVSKGQKISIFNEHKSYVQGVTWDPLGQYVATLSCDRILRV 197
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 153 (58.9 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GHR V +A P L SA D+ ++LW +G + GH+ ++ S+ F P
Sbjct: 461 VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSP 520
Query: 214 NKDLVLSASGDKSVHIWQAVINWEC 238
+ L+ SAS D SV +W + N C
Sbjct: 521 DSSLIASASMDNSVRVWD-IRNTHC 544
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 211
Y +R ++GH V V P L + S D+TVRLWS Q G V ++GH G V S+ F
Sbjct: 417 YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAF 476
Query: 212 LPNKDLVLSASGDKSVHIW 230
PN + SA D+ + +W
Sbjct: 477 SPNGKYLASAGEDQRLKLW 495
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH VWDV + P S S DRT RLWS + Y+GH V+ V+F PN +
Sbjct: 380 YQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN 439
Query: 217 LVLSASGDKSVHIWQA 232
+ + S DK+V +W A
Sbjct: 440 YLATGSTDKTVRLWSA 455
>UNIPROTKB|E1BBZ9 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:DAAA02048546 IPI:IPI00718427 RefSeq:XP_002695684.2
RefSeq:XP_885171.4 UniGene:Bt.20080 ProteinModelPortal:E1BBZ9
Ensembl:ENSBTAT00000006593 GeneID:614851 KEGG:bta:614851
Uniprot:E1BBZ9
Length = 421
Score = 104 (41.7 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 24/73 (32%), Positives = 37/73 (50%)
Query: 160 HRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDL 217
H + V D+ P G +L SAS D+T+R+W + G + GH V S F P+ +
Sbjct: 169 HTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSM 228
Query: 218 VLSASGDKSVHIW 230
+ S K+V +W
Sbjct: 229 LCSVGASKAVFLW 241
Score = 94 (38.1 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 173 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW 230
Q +L + + +++W TGK +L H+ V + F P+ L+L SAS DK++ +W
Sbjct: 140 QLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVW 198
Score = 91 (37.1 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
T +++L GH + V+A D+ DG + TAS+D ++D TG IL GH
Sbjct: 247 TMIRKLEGHHHDVVACDFSPDGALLATASYDTRVYIWDPHTGAILMEF-GH 296
>SGD|S000005798 [details] [associations]
symbol:YTM1 "Constituent of 66S pre-ribosomal particles"
species:4932 "Saccharomyces cerevisiae" [GO:0070545 "PeBoW complex"
evidence=IDA;IPI] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP;IPI] [GO:0003674
"molecular_function" evidence=ND] [GO:0051276 "chromosome
organization" evidence=IGI] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000005798 GO:GO:0005654 EMBL:BK006948
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042273 GO:GO:0030687 GO:GO:0051276 GO:GO:0006364
GO:GO:0070545 EMBL:X89633 KO:K00791 RefSeq:NP_014917.3
GeneID:854448 KEGG:sce:YOR274W InterPro:IPR012972 Pfam:PF08154
RefSeq:NP_014915.3 GeneID:854446 KEGG:sce:YOR272W KO:K14863
HOGENOM:HOG000264464 HAMAP:MF_03029 GeneTree:ENSGT00640000091456
OMA:DNSIGFW OrthoDB:EOG4GQTDF EMBL:U92821 EMBL:Z75180 PIR:S67174
ProteinModelPortal:Q12024 SMR:Q12024 DIP:DIP-6484N IntAct:Q12024
MINT:MINT-655357 STRING:Q12024 PaxDb:Q12024 PeptideAtlas:Q12024
EnsemblFungi:YOR272W CYGD:YOR272w NextBio:976700
Genevestigator:Q12024 GermOnline:YOR272W Uniprot:Q12024
Length = 460
Score = 151 (58.2 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 48/164 (29%), Positives = 78/164 (47%)
Query: 129 TTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLW 188
T L + S V + L Y + SFS + D V + V G + S S D VR W
Sbjct: 73 TKKGLSSEASLNVEYTRAILPPSY-LNSFS-NEDWVSSLDVGDGSKHIISGSYDGIVRTW 130
Query: 189 STQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXX 248
+G QYSGHSG + +V+++ N LV SA D+++ +W+ +
Sbjct: 131 DL-SGNVQKQYSGHSGPIRAVKYISNTRLV-SAGNDRTLRLWKTKND---DLKLTSQQQA 185
Query: 249 ESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWD 292
+ + DE +I + L GH V++ D +SD ++++AS+D
Sbjct: 186 QEDDDDEVNIEDGKTLAILEGHKAPVVSID-VSDNSRILSASYD 228
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 154 (59.3 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
GHR GVW + P L S S DRT+R+W+ T +CV GH+G++ + ++ V
Sbjct: 505 GHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQV 564
Query: 219 LSASGDKSVHIWQAVINWEC 238
+SA+ D V +W ++ + EC
Sbjct: 565 VSAAADGLVKVW-SLSSGEC 583
Score = 117 (46.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 36/140 (25%), Positives = 58/140 (41%)
Query: 148 LLSCYKIRSFSGHRDGVWDVAVRPGQP--VLGSASADRTVRLWSTQTGKCVLQYSGHSGS 205
+ Y SF GH + + Q VL S + D VRLW + + + + GHS
Sbjct: 132 IAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSV 191
Query: 206 VNSVRFLPNKDLVLSASGDKSVHIW----QAVINWECXXXXXXXXXXESKEPDESSITLR 261
+ + F P +LS S DK+V +W ++ + + +P+E L
Sbjct: 192 IRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQPEEK--ILY 249
Query: 262 TPVKELLGHSNVVIAADWLS 281
T G N+++A DW S
Sbjct: 250 TA-----GEGNLILAWDWKS 264
Score = 117 (46.2 bits), Expect = 0.00099, P = 0.00099
Identities = 39/121 (32%), Positives = 60/121 (49%)
Query: 118 LASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLG 177
LAS+ + LK N L Q +K S F + + I++ RD V + V ++
Sbjct: 430 LASSSQDRTLKRFN-LGSQLNK--SDFSNRAV--WTIKAHD--RD-VNAIQVSKDGRIIA 481
Query: 178 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWE 237
SAS D+T++LW + TG+ V GH V + F P + S SGD+++ IW V +
Sbjct: 482 SASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWN-VDTQQ 540
Query: 238 C 238
C
Sbjct: 541 C 541
Score = 52 (23.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFD--VETGTI--LQSLTGH 312
L GH+++V+ D DG + T + D L++ +E + TGH
Sbjct: 360 LEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGH 409
>TAIR|locus:2091876 [details] [associations]
symbol:FIE "AT3G20740" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043078 "polar nucleus" evidence=IDA] [GO:2000014
"regulation of endosperm development" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0000003 "reproduction" evidence=IMP] [GO:0006349
"regulation of gene expression by genetic imprinting"
evidence=RCA;IMP] [GO:0016571 "histone methylation"
evidence=RCA;IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0010048 "vernalization response" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007275 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0006351 GO:GO:0043078 GO:GO:0006349
GO:GO:2000014 GO:GO:0016571 KO:K11462 HOGENOM:HOG000005759
OMA:CTTLTHP EMBL:AB025629 EMBL:AF129516 EMBL:AK117114 EMBL:BT005326
IPI:IPI00544225 RefSeq:NP_188710.1 UniGene:At.20884
UniGene:At.74826 ProteinModelPortal:Q9LT47 SMR:Q9LT47
DIP:DIP-31378N IntAct:Q9LT47 STRING:Q9LT47 PaxDb:Q9LT47
PRIDE:Q9LT47 EnsemblPlants:AT3G20740.1 GeneID:821622
KEGG:ath:AT3G20740 GeneFarm:2279 TAIR:At3g20740 eggNOG:NOG275229
InParanoid:Q9LT47 PhylomeDB:Q9LT47 ProtClustDB:CLSN2685055
Genevestigator:Q9LT47 GermOnline:AT3G20740 Uniprot:Q9LT47
Length = 369
Score = 149 (57.5 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 54/203 (26%), Positives = 89/203 (43%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLG-SASADRTVRLWSTQTGKCVLQYSGHSG---SVNSVR 210
+S GH D V ++ +P +P L +AS D +VRLW+ +TG C+L ++G G V SV
Sbjct: 122 KSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVETGICILIFAGAGGHRYEVLSVD 181
Query: 211 FLPNKDLVLSASG-DKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLG 269
F P+ ++ G D ++ IW W SK P + ++ PV
Sbjct: 182 FHPSDIYRFASCGMDTTIKIWSMKEFWTYVEKSFTWTDDPSKFPTKF---VQFPVFTASI 238
Query: 270 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD---EEPHILCVSSYYS 326
H+N V W G+ +++ S D L++ + D P +C ++
Sbjct: 239 HTNYVDCNRWF--GDFILSKSVDNEILLWEPQLKENSPGEGASDVLLRYPVPMC-DIWFI 295
Query: 327 KVSCDLFQRIQHLDCGTSENPIH 349
K SCDL + + G E ++
Sbjct: 296 KFSCDL--HLSSVAIGNQEGKVY 316
>DICTYBASE|DDB_G0267982 [details] [associations]
symbol:copA "coatomer protein complex alpha subunit"
species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI vesicle
coat" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267982 GO:GO:0006886
GenomeReviews:CM000150_GR GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000003
GO:GO:0030126 HSSP:P63005 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:XP_647464.1 ProteinModelPortal:Q55FR9
STRING:Q55FR9 EnsemblProtists:DDB0233797 GeneID:8616271
KEGG:ddi:DDB_G0267982 OMA:FWVLGAH ProtClustDB:CLSZ2846951
Uniprot:Q55FR9
Length = 1221
Score = 156 (60.0 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 52/195 (26%), Positives = 88/195 (45%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ GH+D + V P + S+S D +R+W+ Q+ C+ + +GH+ V S F P
Sbjct: 88 TLKGHKDYIRSVEFHREAPWIVSSSDDMVIRIWNWQSRTCIAELNGHNHYVMSALFHPKD 147
Query: 216 DLVLSASGDKSVHIWQ-AVINWECXXXXXXXXXXESKEPDE---SSITLRTPVKELLGHS 271
DLV+SAS D+++ IW + + + + DE + I++R ++ GH
Sbjct: 148 DLVVSASLDQTIRIWDISGLKKKMTTVKPYRENDPMRLQDELFGTDISVRLSLE---GHD 204
Query: 272 NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKVSCD 331
V A + +++AS D L+ + I+ + GH Y+ VSC
Sbjct: 205 RGVNWASFHPTQPYIVSASDDHQVKLWRMND-PIVDTFRGH------------YNNVSCA 251
Query: 332 LFQRIQHLDCGTSEN 346
LF Q L SE+
Sbjct: 252 LFHPRQDLIISNSED 266
Score = 132 (51.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 156 SFSGHRDGV-WDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
S GH GV W + P QP + SAS D V+LW V + GH +V+ F P
Sbjct: 199 SLEGHDRGVNW-ASFHPTQPYIVSASDDHQVKLWR-MNDPIVDTFRGHYNNVSCALFHPR 256
Query: 215 KDLVLSASGDKSVHIWQAV 233
+DL++S S DK++ +W +
Sbjct: 257 QDLIISNSEDKTIRVWDII 275
Score = 40 (19.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 302 TGTILQSLTGHDEEPHILCVSSY 324
T + +Q L + P ++C SY
Sbjct: 1149 TPSDIQQLNYDERNPFVICAHSY 1171
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 147 (56.8 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 45/154 (29%), Positives = 78/154 (50%)
Query: 89 ESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQ-KLKTTNKLKV---QTSKIVSSF 144
E I+ K P C + +M + +Q S+ +A + +TT KV + K+ S++
Sbjct: 229 EQHIDRKCPNCGWGLPLLHMKRARIQQNSTGSSSNADIQTQTTRPWKVIYRERFKVESNW 288
Query: 145 KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG 204
+ C +I+ F GH DGV + ++ +L + S D T+ +W TGK + + SGHS
Sbjct: 289 RKG--HC-RIQEFKGHMDGV--LTLQFNYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSD 343
Query: 205 SVNSVRFLPNKDLVLSASGDKSVHIWQAVINWEC 238
V ++ F K +++ S DK++ +W I EC
Sbjct: 344 GVKTLYFDDRK--LITGSLDKTIRVWN-YITGEC 374
Score = 140 (54.3 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR SGH DGV + + + GS D+T+R+W+ TG+C+ Y GHS SV SV
Sbjct: 335 IRRLSGHSDGVKTLYFDDRKLITGSL--DKTIRVWNYITGECISTYRGHSDSVLSVDSY- 391
Query: 214 NKDLVLSASGDKSVHIW 230
+ +++S S DK+V +W
Sbjct: 392 -QKVIVSGSADKTVKVW 407
Score = 115 (45.5 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I ++ GH D V ++V Q V+ S SAD+TV++W ++ C GH+ VN V+ P
Sbjct: 375 ISTYRGHSDSV--LSVDSYQKVIVSGSADKTVKVWHVESRTCYT-LRGHTEWVNCVKLHP 431
Query: 214 NKDLVLSASGDKSVHIWQAVIN 235
S S D ++ +W N
Sbjct: 432 KSFSCFSCSDDTTIRMWDIRTN 453
Score = 48 (22.0 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 286 VITASWDRVANLFDVETGTILQSLTGHDE 314
+++ D L+DV+TG +++ GH E
Sbjct: 525 LLSCGLDNTIKLWDVKTGKCIRTQFGHVE 553
>ZFIN|ZDB-GENE-040426-1947 [details] [associations]
symbol:chaf1b "chromatin assembly factor 1,
subunit B" species:7955 "Danio rerio" [GO:0048568 "embryonic organ
development" evidence=IMP] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1947 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0060041
GO:GO:0000278 GO:GO:0048568 GeneTree:ENSGT00550000074968
EMBL:CT737124 EMBL:BX571809 IPI:IPI00501028
Ensembl:ENSDART00000079222 Ensembl:ENSDART00000122052
Uniprot:E7EYR2
Length = 613
Score = 152 (58.6 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 47/171 (27%), Positives = 75/171 (43%)
Query: 176 LGSASADRTVRLWSTQTG---KCVLQY----SGHSGSVNSVRFLPNKDLVLSASGDKSVH 228
L +A D TVR+W G K V+++ + H+ +VN VRF P +++ S D ++
Sbjct: 32 LATAGVDTTVRMWRVDKGPDGKAVVEFLSNLARHTKAVNVVRFSPTAEVLASGGDDAAIL 91
Query: 229 IWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVIT 288
+W+ N E +++ ES + VK L GH V W SDG + +
Sbjct: 92 LWKLNDNKEPEQTPTFQEEEDAQLNKESW----SVVKTLRGHIEDVYDISWTSDGNFMAS 147
Query: 289 ASWDRVANLFDVETGTILQSLTGHDEEPHILC---VSSYYSKVSCDLFQRI 336
S D A ++DV G + H + + Y S +SCD R+
Sbjct: 148 GSVDNTAIMWDVNKGQKMCIFNDHKSYVQGVAWDPLGQYISTLSCDRVMRV 198
>UNIPROTKB|F1RJ54 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:FP102612 RefSeq:XP_003131801.1 UniGene:Ssc.25169
Ensembl:ENSSSCT00000019321 GeneID:100525660 KEGG:ssc:100525660
Uniprot:F1RJ54
Length = 421
Score = 104 (41.7 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 24/73 (32%), Positives = 37/73 (50%)
Query: 160 HRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDL 217
H + V D+ P G +L SAS D+T+R+W + G + GH V S F P+ +
Sbjct: 169 HTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSM 228
Query: 218 VLSASGDKSVHIW 230
+ S K+V +W
Sbjct: 229 LCSVGASKAVFLW 241
Score = 94 (38.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 173 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW 230
Q +L + + +++W TGK +L H+ V + F P+ L+L SAS DK++ +W
Sbjct: 140 QLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVW 198
Score = 90 (36.7 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
T +++L GH + V+A D+ DG + TAS+D ++D TG IL GH
Sbjct: 247 TMIRKLEGHHHDVVACDFSPDGALLATASYDTRVYIWDPHTGDILMEF-GH 296
Score = 63 (27.2 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
+K L GH N V + + D + + + L+D++ T+++ L GH +
Sbjct: 207 MKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWDMDKYTMIRKLEGHHHD 258
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 149 (57.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 48/173 (27%), Positives = 70/173 (40%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNK 215
F+GH+D V V P +L S S D+TVR+W G+ + + H+ +V SV F +
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV-FRAHTATVRSVHFCSDG 115
Query: 216 DLVLSASGDKSVHIWQAV-----------INW-ECXXXXXXXXXXESKEPDES----SIT 259
++AS DK+V +W INW C S D++ T
Sbjct: 116 QSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 260 LRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
R V H V D+ G + A D ++DV T +LQ H
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 228
Score = 137 (53.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 44/174 (25%), Positives = 70/174 (40%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R F GHRD V V L S S D + +W + +++GH +V V F P+
Sbjct: 13 RHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPS 72
Query: 215 KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKE-----------PDESSITLRTP 263
L+ S S DK+V IW + E S D+ ++ + +
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWST 132
Query: 264 VKE-----LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
++ L H N V A + DG +++AS D+ L+D + + S H
Sbjct: 133 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 186
Score = 124 (48.7 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 46/159 (28%), Positives = 69/159 (43%)
Query: 172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231
GQ + +AS D+TV++WST K + S H V +F P+ L++SAS DK+V +W
Sbjct: 115 GQSFV-TASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 232 AV----INWECXXXXXXXXXXESKEPDESSIT---LRTPVK-------ELLGH----SNV 273
++ C P + I + VK LL H S
Sbjct: 174 KTSRECVHSYCEHGGFVTYV--DFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAA 231
Query: 274 VIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
V A + G ++TAS D + D+ G +L +L GH
Sbjct: 232 VNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGH 270
Score = 114 (45.2 bits), Expect = 0.00086, P = 0.00086
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
S S H + V P ++ SAS D+TV+LW + +CV Y H G V V F P+
Sbjct: 140 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 216 DLVLSASGDKSVHIW 230
+ +A D +V +W
Sbjct: 200 TCIAAAGMDNTVKVW 214
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/189 (24%), Positives = 80/189 (42%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
++ + +GH + ++ + + S D TV +W TG+ V GH ++S F
Sbjct: 211 EVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFN 270
Query: 213 PNKDLVLSASGDKSVHIWQAVINWECXXXXX-------------XXXXXESKEPDES--- 256
+ L+L+ S DK+ +W AV N +C + D +
Sbjct: 271 WDCSLILTGSMDKTCKLWDAV-NGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARI 329
Query: 257 -SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
S R V +L GH + + G +++T S D+ A ++D +TG LQ L GH +E
Sbjct: 330 FSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDE 389
Query: 316 PHILCVSSY 324
C +Y
Sbjct: 390 I-FSCAFNY 397
Score = 129 (50.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 33/113 (29%), Positives = 59/113 (52%)
Query: 120 SNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSA 179
+NP K+ T + K T K+ S +T CY +F GH + ++ P ++ +
Sbjct: 143 NNPYGDKIATGSFDK--TCKLWS-VETG--KCY--HTFRGHTAEIVCLSFNPQSTLVATG 195
Query: 180 SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA 232
S D T +LW Q+G+ V +GHS + S+ F + + +++ S D +V +W+A
Sbjct: 196 SMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEA 248
Score = 126 (49.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 24/88 (27%), Positives = 43/88 (48%)
Query: 144 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHS 203
F + C + GH + ++ P L + S+D+T R+W QTG+C+ GH+
Sbjct: 330 FSAATREC--VTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHT 387
Query: 204 GSVNSVRFLPNKDLVLSASGDKSVHIWQ 231
+ S F D++++ S D + IW+
Sbjct: 388 DEIFSCAFNYKGDIIITGSKDNTCRIWR 415
Score = 87 (35.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 24/88 (27%), Positives = 41/88 (46%)
Query: 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 211
Y + H + +VA+ + S DRT +LW T +G+ + GH V ++ F
Sbjct: 83 YLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAF 142
Query: 212 L-PNKDLVLSASGDKSVHIWQAVINWEC 238
P D + + S DK+ +W +V +C
Sbjct: 143 NNPYGDKIATGSFDKTCKLW-SVETGKC 169
Score = 75 (31.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
GH+ ++ + V T S D A L+D+++G + +LTGH E
Sbjct: 175 GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAE 221
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 211
Y +R ++GH V V P L + S D+TVRLWSTQ G V ++GH G V ++ F
Sbjct: 417 YPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAF 476
Query: 212 LPNKDLVLSASGDKSVHIW 230
PN + SA D+ + +W
Sbjct: 477 SPNGKYLASAGEDQRLKLW 495
Score = 149 (57.5 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GHR V +A P L SA D+ ++LW +G + GH+ ++ S+ F P
Sbjct: 461 VRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP 520
Query: 214 NKDLVLSASGDKSVHIWQAVINWEC 238
+ L+ SAS D SV +W + N C
Sbjct: 521 DSSLIASASMDNSVRVWD-IRNTYC 544
Score = 143 (55.4 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 29/74 (39%), Positives = 41/74 (55%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH VWD+ + P SAS DRT RLWS + Y+GH V+ V+F PN +
Sbjct: 380 YQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSN 439
Query: 217 LVLSASGDKSVHIW 230
+ + S DK+V +W
Sbjct: 440 YLATGSTDKTVRLW 453
>UNIPROTKB|F1P2D7 [details] [associations]
symbol:CHAF1B "Chromatin assembly factor 1 subunit B"
species:9031 "Gallus gallus" [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031497
"chromatin assembly" evidence=IEA] [GO:0033186 "CAF-1 complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005829 GO:GO:0005813
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 OMA:VYDICWT PRINTS:PR00319
EMBL:AADN02010795 IPI:IPI01017347 Ensembl:ENSGALT00000025844
Uniprot:F1P2D7
Length = 566
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 50/173 (28%), Positives = 79/173 (45%)
Query: 176 LGSASADRTVRLWSTQTG---KCVLQY----SGHSGSVNSVRFLPNKDLVLSASGDKSVH 228
L SA D VR+W + G K ++++ + H+ +VN VRF P+ + VL++ GD +V
Sbjct: 32 LASAGVDTAVRVWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPSGE-VLASGGDDAV- 89
Query: 229 IWQAVINWECXXXXXXXXXXESKEPDESSITLR--TPVKELLGHSNVVIAADWLSDGEQV 286
++ W+ E DE+ + T VK L GH V W SDG +
Sbjct: 90 ----ILLWKLNDSKELEPLAFQDE-DEAQLNKENWTVVKTLRGHLEDVYDICWTSDGNYM 144
Query: 287 ITASWDRVANLFDVETGTILQSLTGHDEEPHILC---VSSYYSKVSCDLFQRI 336
+AS D A ++DV G + L H + + Y + +SCD R+
Sbjct: 145 ASASVDNTAIMWDVVKGQKVSILNEHKSYVQGITWDPLGQYIATLSCDRVLRV 197
>UNIPROTKB|Q5R1S9 [details] [associations]
symbol:CHAF1B "Chromatin assembly factor 1 subunit B"
species:9031 "Gallus gallus" [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0031497 "chromatin assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0007049
GO:GO:0031497 GO:GO:0033186 HOGENOM:HOG000183312 KO:K10751
EMBL:AB195693 EMBL:AJ719705 IPI:IPI00585257 RefSeq:NP_001008677.2
UniGene:Gga.8862 ProteinModelPortal:Q5R1S9 IntAct:Q5R1S9
STRING:Q5R1S9 GeneID:418514 KEGG:gga:418514 CTD:8208
InParanoid:Q5ZLM9 OrthoDB:EOG4G4GQD NextBio:20821686 PRINTS:PR00319
Uniprot:Q5R1S9
Length = 566
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 50/173 (28%), Positives = 79/173 (45%)
Query: 176 LGSASADRTVRLWSTQTG---KCVLQY----SGHSGSVNSVRFLPNKDLVLSASGDKSVH 228
L SA D VR+W + G K ++++ + H+ +VN VRF P+ + VL++ GD +V
Sbjct: 32 LASAGVDTAVRVWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPSGE-VLASGGDDAV- 89
Query: 229 IWQAVINWECXXXXXXXXXXESKEPDESSITLR--TPVKELLGHSNVVIAADWLSDGEQV 286
++ W+ E DE+ + T VK L GH V W SDG +
Sbjct: 90 ----ILLWKLNDSKELEPLAFQDE-DEAQLNKENWTVVKTLRGHLEDVYDICWTSDGNYM 144
Query: 287 ITASWDRVANLFDVETGTILQSLTGHDEEPHILC---VSSYYSKVSCDLFQRI 336
+AS D A ++DV G + L H + + Y + +SCD R+
Sbjct: 145 ASASVDNTAIMWDVVKGQKVSILNEHKSYVQGITWDPLGQYIATLSCDRVLRV 197
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 41/144 (28%), Positives = 65/144 (45%)
Query: 172 GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
G L S S D T+ LWS + K + + +GH +N V F P+ ++ SAS DKS+ +W
Sbjct: 341 GPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLW 400
Query: 231 Q-------AVINWECXXXXXXXXXXESK--EPDESSITLRT-PVK------ELLGHSNVV 274
A + +S+ S TL+ VK +L GH++ V
Sbjct: 401 DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEV 460
Query: 275 IAADWLSDGEQVITASWDRVANLF 298
A DW DG++V + D+ ++
Sbjct: 461 YAVDWSPDGQRVASGGKDKCLRIW 484
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 217
+GH+ + V P V+ SAS D++++LW +TGK + GH +V + + + L
Sbjct: 370 TGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 429
Query: 218 VLSASGDKSVHIW 230
++S S D ++ +W
Sbjct: 430 LVSGSSDSTLKVW 442
Score = 116 (45.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 155 RSFSGHRDGV----WD-VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 209
R+ +GH + W+ + P + S+S D +VR+W T G+C +GH+ SV +
Sbjct: 194 RALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCL 253
Query: 210 RFLPNKDLVLSASGDKSVHIWQA 232
R+ L+ SAS D+++ +W+A
Sbjct: 254 RW-GGDGLLYSASQDRTIKVWRA 275
Score = 92 (37.4 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 26/77 (33%), Positives = 35/77 (45%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLW--STQTGKCVLQYSGHSGSVNSVRFLP 213
S GH + V VA P L S S D TVR W ST+T Q GH V S+ + P
Sbjct: 110 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQ--GHRHWVLSISWSP 167
Query: 214 NKDLVLSASGDKSVHIW 230
+ + S + + +W
Sbjct: 168 DGKKLASGCKNGQILLW 184
Score = 83 (34.3 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 25/78 (32%), Positives = 38/78 (48%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ-YSGHSGSVNSVRFLP---N 214
GHR V ++ P L S + + LW TGK V + +GHS + ++ + P N
Sbjct: 155 GHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHAN 214
Query: 215 KDL--VLSASGDKSVHIW 230
+ V S+S D SV +W
Sbjct: 215 PECRYVASSSKDGSVRVW 232
Score = 78 (32.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 261 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+ P+ + GH ++ + D + +AS+D+ L+D TG L SL GH
Sbjct: 363 KKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGH 414
Score = 77 (32.2 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 24/101 (23%), Positives = 40/101 (39%)
Query: 230 WQAVINWECXXXXXXXXXXESKEPDESSITLRTPV----KELLGHSNVVIAADWLSDGEQ 285
W ++WE S D S T + L GH+ V W DG
Sbjct: 202 WITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDG-L 260
Query: 286 VITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
+ +AS DR ++ G + ++L GH + + +S+ Y+
Sbjct: 261 LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA 301
Score = 66 (28.3 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
L GH V W +D +++ S D ++DV+ + L GH +E
Sbjct: 411 LRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADE 459
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 211
Y +R ++GH V V P L + S D+TVRLWS Q G V ++GH G V S+ F
Sbjct: 417 YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSF 476
Query: 212 LPNKDLVLSASGDKSVHIW 230
PN + SA D+ + +W
Sbjct: 477 SPNGKYLASAGEDQRLKLW 495
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH VWDV + P S S DRT RLWS + Y+GH V+ V+F PN +
Sbjct: 380 YQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN 439
Query: 217 LVLSASGDKSVHIWQA 232
+ + S DK+V +W A
Sbjct: 440 YLATGSTDKTVRLWSA 455
Score = 148 (57.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 28/77 (36%), Positives = 43/77 (55%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GHR V ++ P L SA D+ ++LW +G + GH+ S+ S+ F P
Sbjct: 461 VRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSP 520
Query: 214 NKDLVLSASGDKSVHIW 230
+ L+ SAS D SV +W
Sbjct: 521 DSGLIASASMDNSVRVW 537
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 211
Y +R ++GH V V P L + S D+TVRLWS Q G V ++GH G V S+ F
Sbjct: 417 YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAF 476
Query: 212 LPNKDLVLSASGDKSVHIW 230
PN + SA D+ + +W
Sbjct: 477 SPNGKYLASAGEDQRLKLW 495
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GHR V +A P L SA D+ ++LW +G + GH+ ++ S+ F P
Sbjct: 461 VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP 520
Query: 214 NKDLVLSASGDKSVHIWQAVINWEC 238
+ L+ SAS D SV +W + N C
Sbjct: 521 DSGLIASASMDNSVRVWD-IRNTYC 544
Score = 147 (56.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH VWD+ + P S S DRT RLWS + Y+GH V+ V+F PN +
Sbjct: 380 YQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN 439
Query: 217 LVLSASGDKSVHIWQA 232
+ + S DK+V +W A
Sbjct: 440 YLATGSTDKTVRLWSA 455
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 211
Y +R ++GH V V P L + S D+TVRLWS Q G V ++GH G V S+ F
Sbjct: 435 YPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAF 494
Query: 212 LPNKDLVLSASGDKSVHIW 230
PN + SA D+ + +W
Sbjct: 495 SPNGKYLASAGEDQRLKLW 513
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GHR V +A P L SA D+ ++LW +G + GH+ ++ S+ F P
Sbjct: 479 VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP 538
Query: 214 NKDLVLSASGDKSVHIWQAVINWEC 238
+ L+ SAS D SV +W + N C
Sbjct: 539 DSSLIASASMDNSVRVWD-IRNTYC 562
Score = 147 (56.8 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH VWD+ + P S S DRT RLWS + Y+GH V+ V+F PN +
Sbjct: 398 YQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN 457
Query: 217 LVLSASGDKSVHIWQA 232
+ + S DK+V +W A
Sbjct: 458 YLATGSTDKTVRLWSA 473
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 151 (58.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 47/182 (25%), Positives = 81/182 (44%)
Query: 162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSA 221
+GV +A+ P + S D+ +R+WS +G V + GH SV S+ F P+ ++LS
Sbjct: 444 NGVTAIAISPNDQFIAVGSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSPDSSILLSG 502
Query: 222 SGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVVIAADWLS 281
S DK++ +W+ + +P+ I T GH++ V++
Sbjct: 503 SLDKTIKVWEL--------QATRSVGLSAIKPE--GICKAT----YTGHTDFVLSVAVSP 548
Query: 282 DGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSS---YYSKVSCDLFQRIQH 338
D ++ S DR +D++TG + GH +C S ++ S DL RI
Sbjct: 549 DSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWS 608
Query: 339 LD 340
+D
Sbjct: 609 ID 610
Score = 134 (52.2 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 31/75 (41%), Positives = 39/75 (52%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+++GH D V VAV P S S DR+++ W QTG+ L GH SV SV F P+
Sbjct: 533 TYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDG 592
Query: 216 DLVLSASGDKSVHIW 230
S SGD IW
Sbjct: 593 RQFASGSGDLRARIW 607
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 27/83 (32%), Positives = 43/83 (51%)
Query: 149 LSCYKIRS-FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 207
LS K+R FSGH ++ + + S S DRT RLW +TG+C+L+ +G V
Sbjct: 389 LSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG-VT 447
Query: 208 SVRFLPNKDLVLSASGDKSVHIW 230
++ PN + S D+ + +W
Sbjct: 448 AIAISPNDQFIAVGSLDQIIRVW 470
Score = 117 (46.2 bits), Expect = 0.00073, P = 0.00073
Identities = 27/89 (30%), Positives = 42/89 (47%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT------------GKCVLQYSG 201
+ GH++ V+ +A P +L S S D+T+++W Q G C Y+G
Sbjct: 477 VERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTG 536
Query: 202 HSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
H+ V SV P+ LS S D+S+ W
Sbjct: 537 HTDFVLSVAVSPDSRWGLSGSKDRSMQFW 565
>ASPGD|ASPL0000006005 [details] [associations]
symbol:AN5972 species:162425 "Emericella nidulans"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0032511 "late endosome to vacuole
transport via multivesicular body sorting pathway" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011044 SUPFAM:SSF50969 HOGENOM:HOG000163444
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
ProteinModelPortal:C8V3C4 EnsemblFungi:CADANIAT00007048
Uniprot:C8V3C4
Length = 853
Score = 144 (55.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 35/81 (43%), Positives = 45/81 (55%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSVRF 211
KI SF H D + +AV P QP + +AS D T++LW + G KCV Y GHS V +
Sbjct: 89 KIASFEAHPDYIRSIAVHPTQPFVLTASDDMTIKLWDWEKGWKCVQVYEGHSHYVMGLAI 148
Query: 212 LPNKDLVLSASG--DKSVHIW 230
P KD AS D++V IW
Sbjct: 149 NP-KDTNTFASACLDRTVKIW 168
Score = 53 (23.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 281 SDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILC 320
+D ++T S D+ ++D T ++ +L GH C
Sbjct: 196 ADKPYLLTTSDDKTVKVWDYTTKALIATLEGHTSNVSFAC 235
Score = 40 (19.1 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 259 TLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLT 310
T + + L GH++ V A + + +I+ S D ++ T + QSL+
Sbjct: 216 TTKALIATLEGHTSNVSFACYHPELPVIISGSEDGTIKIWHANTYRLEQSLS 267
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 53/212 (25%), Positives = 90/212 (42%)
Query: 120 SNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSA 179
+NP K+ T + K T K+ S +T CY +F GH + ++ P ++ +
Sbjct: 143 NNPYGDKIATGSFDK--TCKLWS-VETG--KCY--HTFRGHTAEIVCLSFNPQSTLVATG 195
Query: 180 SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA------- 232
S D T +LW Q G+ V GHS + S+ F + D +++ S D +V +W A
Sbjct: 196 SMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVN 255
Query: 233 VINWECXXXXXXXXXXESK-----EPDES----SITLRTPVKELLGHSNVVIAADWLSDG 283
++ C + D++ T V L GH + ++ + + G
Sbjct: 256 ILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTG 315
Query: 284 EQVITASWDRVANLFDVETGTILQSLTGHDEE 315
+ + TAS D A +F T + L GH+ E
Sbjct: 316 KLIATASADGTARIFSAATRKCIAKLEGHEGE 347
Score = 142 (55.0 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+ + +GH D + D ++ +ASAD T R++S T KC+ + GH G ++ + F P
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNP 355
Query: 214 NKDLVLSASGDKSVHIWQA 232
+ +L+ S DK+ IW A
Sbjct: 356 QGNHLLTGSSDKTARIWDA 374
Score = 123 (48.4 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 144 FKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHS 203
F + C I GH + ++ P L + S+D+T R+W QTG+C+ GH+
Sbjct: 330 FSAATRKC--IAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHT 387
Query: 204 GSVNSVRFLPNKDLVLSASGDKSVHIWQ 231
+ S F ++V++ S D + IW+
Sbjct: 388 DEIFSCAFNYKGNIVITGSKDNTCRIWR 415
Score = 38 (18.4 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLF 298
L GH++ + + + G VIT S D ++
Sbjct: 383 LEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 44/180 (24%), Positives = 74/180 (41%)
Query: 152 YKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210
YK R GH + V + P + SASAD T R+W +TG + GH V+ +
Sbjct: 170 YKRRLELRGHSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDTLVGHMAGVSCLA 229
Query: 211 FLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKE---------PDESSITL- 260
+ P+ + + S DK++ +W + +++ S I +
Sbjct: 230 WSPDSGTLATGSDDKAIRLWDRITAEPAHAVGTQDGDDDAERGRTHGGTRISGASGIGVG 289
Query: 261 ------RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
R + LLGH N V + G + + S+D L+DV G +++SL H +
Sbjct: 290 GGGGPARGTRRPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSD 349
Score = 114 (45.2 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 26/84 (30%), Positives = 39/84 (46%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R GH + V+ +A P +L S S D V LW + G+ + HS V+ + F +
Sbjct: 300 RPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDPVSGIDFCRD 359
Query: 215 KDLVLSASGDKSVHIWQAVINWEC 238
LV+S S D + IW +C
Sbjct: 360 GTLVVSCSTDGLIRIWDTATG-QC 382
Score = 45 (20.9 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 286 VITASWDRVANLFDVETGTILQSLTGHD 313
V +AS D L+DV++ ++Q + HD
Sbjct: 489 VASASEDGHIVLWDVKSKEVVQKIAAHD 516
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 153 (58.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 50/175 (28%), Positives = 79/175 (45%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+++ GH V V+ +L SAS DRTV++W T+TG GHS V SV F
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSH 348
Query: 214 NKDLVLSASGDKSVHIW-------QAVI----NWECXXXXXXXXXXESKEPDESSITL-R 261
+ L+ SAS D +V IW Q + +W + D+S++ +
Sbjct: 349 DSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWD 407
Query: 262 TPVKELL----GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
T L GH + V + + D + + +AS D ++D TG++ +L GH
Sbjct: 408 TGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGH 462
Score = 147 (56.8 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 33/75 (44%), Positives = 41/75 (54%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ GHRD V V +L SAS DRTVR+W T+ G GHS V SV F +
Sbjct: 458 TLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDS 517
Query: 216 DLVLSASGDKSVHIW 230
L+ SAS D++V IW
Sbjct: 518 RLLASASNDQTVRIW 532
Score = 137 (53.3 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 50/173 (28%), Positives = 73/173 (42%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ GH D V V +L SAS D TV++W T TG GH V SV F +
Sbjct: 333 TLEGHSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDS 391
Query: 216 DLVLSASGDKSVHIW-------QAVI----NWECXXXXXXXXXXESKEPDESSITL-RTP 263
L+ SAS D +V IW Q + +W + D+S++ + T
Sbjct: 392 QLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTG 451
Query: 264 VKELL----GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
L GH + V + + D + +AS DR ++D E G+ +L GH
Sbjct: 452 TGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGH 504
Score = 38 (18.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 27 DQDLSMLRTHLNSEYDDVVLPSSVKFKLNSLFSQ 60
D DL + +L +E D + PS V SLFS+
Sbjct: 76 DVDLPT-KDYLINEARDEIYPSGVTGAHLSLFSR 108
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 150 (57.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 51/155 (32%), Positives = 71/155 (45%)
Query: 162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYS---GHSGSVNSVRFLPN-KDL 217
DGV VA+ P + + S D+TVR+W T TG V + GH SV SV F PN K+L
Sbjct: 400 DGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKEL 459
Query: 218 VLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVVIAA 277
V S S DK++ +W+ +N + + RT GH + V++
Sbjct: 460 V-SGSLDKTIKLWE--LNLP---------RQQYNSAGKGGKCHRT----FEGHKDFVLSV 503
Query: 278 DWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
DG V++ S DR +D TG L GH
Sbjct: 504 CLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGH 538
Score = 131 (51.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 29/77 (37%), Positives = 38/77 (49%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R+F GH+D V V + P + S S DR V+ W TG + GH SV SV P
Sbjct: 491 RTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPT 550
Query: 215 KDLVLSASGDKSVHIWQ 231
+L + SGD IW+
Sbjct: 551 GNLFATGSGDMRARIWR 567
Score = 120 (47.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 29/92 (31%), Positives = 42/92 (45%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-----------GKCVLQYSG 201
++ + GH+D V+ VA P L S S D+T++LW GKC + G
Sbjct: 436 RLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEG 495
Query: 202 HSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 233
H V SV P+ V+S S D+ V W +
Sbjct: 496 HKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPI 527
Score = 41 (19.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 21 KLSNLGDQDLSMLR-THLNSEYDDVVLPSSVKFKLNSLFSQIEREF 65
+L + G S L T N+ V P+S +LN L Q+ +EF
Sbjct: 11 RLPSSGRAQTSQLPLTMYNAHRGMVPAPNS---RLNELLDQLRQEF 53
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 126 (49.4 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 42/144 (29%), Positives = 65/144 (45%)
Query: 172 GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
G L S S D T+ LWS + K + + +GH +N V F P+ +V SAS DKS+ +W
Sbjct: 340 GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLW 399
Query: 231 Q-------AVINWECXXXXXXXXXXESK--EPDESSITLRT-PVK------ELLGHSNVV 274
A + +S+ S TL+ VK +L GH++ V
Sbjct: 400 DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEV 459
Query: 275 IAADWLSDGEQVITASWDRVANLF 298
A DW DG++V + D+ ++
Sbjct: 460 YAVDWSPDGQRVASGGKDKCLRIW 483
Score = 117 (46.2 bits), Expect = 0.00052, P = 0.00052
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 217
+GH+ + V P ++ SAS D++++LW +TGK + GH +V + + + L
Sbjct: 369 TGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 428
Query: 218 VLSASGDKSVHIW 230
++S S D ++ +W
Sbjct: 429 LVSGSSDSTLKVW 441
Score = 115 (45.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 155 RSFSGHRDGV----WD-VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 209
R+ +GH + W+ + P + S+S D +VR+W T G+C +GH+ SV +
Sbjct: 193 RTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCL 252
Query: 210 RFLPNKDLVLSASGDKSVHIWQA 232
R+ L+ SAS D+++ +W+A
Sbjct: 253 RW-GGDGLLYSASQDRTIKVWRA 274
Score = 91 (37.1 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 29/110 (26%), Positives = 44/110 (40%)
Query: 128 KTTNKLKVQTSKIVSSFKTSLLSCYKIR-------SFSGHRDGVWDVAVRPGQPVLGSAS 180
KT V+T K++ + +++R S GH + V VA P L S S
Sbjct: 75 KTLESQAVETEKVLDIIYQPQ-AIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGS 133
Query: 181 ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
D TVR W T GH V S+ + P+ + S + + +W
Sbjct: 134 GDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLW 183
Score = 82 (33.9 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 26/78 (33%), Positives = 37/78 (47%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ-YSGHSGSVNSVRFLP---N 214
GHR V ++ P L S + + LW TGK V + +GHS + + + P N
Sbjct: 154 GHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHAN 213
Query: 215 KDL--VLSASGDKSVHIW 230
+ V S+S D SV IW
Sbjct: 214 PECRYVASSSKDGSVRIW 231
Score = 77 (32.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 261 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+ P+ + GH ++ + D V +AS+D+ L+D TG L SL GH
Sbjct: 362 KKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGH 413
Score = 73 (30.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
L GH+ V W DG + +AS DR ++ G + ++L GH + + +S+ Y+
Sbjct: 242 LTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA 300
Score = 68 (29.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
L GH V W +D +++ S D ++DV+ + L GH +E
Sbjct: 410 LRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADE 458
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 126 (49.4 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 42/144 (29%), Positives = 65/144 (45%)
Query: 172 GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
G L S S D T+ LWS + K + + +GH +N V F P+ +V SAS DKS+ +W
Sbjct: 340 GPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLW 399
Query: 231 Q-------AVINWECXXXXXXXXXXESK--EPDESSITLRT-PVK------ELLGHSNVV 274
A + +S+ S TL+ VK +L GH++ V
Sbjct: 400 DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEV 459
Query: 275 IAADWLSDGEQVITASWDRVANLF 298
A DW DG++V + D+ ++
Sbjct: 460 YAVDWSPDGQRVASGGKDKCLRIW 483
Score = 117 (46.2 bits), Expect = 0.00052, P = 0.00052
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 217
+GH+ + V P ++ SAS D++++LW +TGK + GH +V + + + L
Sbjct: 369 TGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 428
Query: 218 VLSASGDKSVHIW 230
++S S D ++ +W
Sbjct: 429 LVSGSSDSTLKVW 441
Score = 115 (45.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 155 RSFSGHRDGV----WD-VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 209
R+ +GH + W+ + + P + S+S D +VR+W T G+C +GH+ SV +
Sbjct: 193 RTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCL 252
Query: 210 RFLPNKDLVLSASGDKSVHIWQA 232
R+ L+ SAS D+++ +W+A
Sbjct: 253 RW-GGDGLLYSASQDRTIKVWRA 274
Score = 98 (39.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 32/110 (29%), Positives = 44/110 (40%)
Query: 128 KTTNKLKVQTSKIVSSFKTSLLSCYKIR-------SFSGHRDGVWDVAVRPGQPVLGSAS 180
KT V+T KIV + +++R S GH + V VA P L S S
Sbjct: 75 KTLESQSVETEKIVDIIYQPQ-AVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGS 133
Query: 181 ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
D TVR W T GH V S+ + P+ + S + V +W
Sbjct: 134 GDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLW 183
Score = 77 (32.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 261 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+ P+ + GH ++ + D V +AS+D+ L+D TG L SL GH
Sbjct: 362 KKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGH 413
Score = 73 (30.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
L GH+ V W DG + +AS DR ++ G + ++L GH + + +S+ Y+
Sbjct: 242 LTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA 300
Score = 67 (28.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
L GH V W +D +++ S D ++DV+ + L GH +E
Sbjct: 410 LRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADE 458
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 126 (49.4 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 42/144 (29%), Positives = 65/144 (45%)
Query: 172 GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
G L S S D T+ LWS + K + + +GH +N V F P+ +V SAS DKS+ +W
Sbjct: 342 GPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLW 401
Query: 231 Q-------AVINWECXXXXXXXXXXESK--EPDESSITLRT-PVK------ELLGHSNVV 274
A + +S+ S TL+ VK +L GH++ V
Sbjct: 402 DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEV 461
Query: 275 IAADWLSDGEQVITASWDRVANLF 298
A DW DG++V + D+ ++
Sbjct: 462 YAVDWSPDGQRVASGGKDKCLRIW 485
Score = 117 (46.2 bits), Expect = 0.00053, P = 0.00053
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 217
+GH+ + V P ++ SAS D++++LW +TGK + GH +V + + + L
Sbjct: 371 TGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 430
Query: 218 VLSASGDKSVHIW 230
++S S D ++ +W
Sbjct: 431 LVSGSSDSTLKVW 443
Score = 115 (45.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 155 RSFSGHRDGV----WD-VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 209
R+ +GH + W+ + + P + S+S D +VR+W T G+C +GH+ SV +
Sbjct: 195 RTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCL 254
Query: 210 RFLPNKDLVLSASGDKSVHIWQA 232
R+ L+ SAS D+++ +W+A
Sbjct: 255 RW-GGDGLLYSASQDRTIKVWRA 276
Score = 97 (39.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 31/110 (28%), Positives = 44/110 (40%)
Query: 128 KTTNKLKVQTSKIVSSFKTSLLSCYKIR-------SFSGHRDGVWDVAVRPGQPVLGSAS 180
KT V+T KIV + +++R S GH + V VA P L S S
Sbjct: 77 KTLESQSVETEKIVDIIYQPQ-AVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGS 135
Query: 181 ADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
D TVR W T GH V S+ + P+ + S + + +W
Sbjct: 136 GDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLW 185
Score = 77 (32.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 261 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+ P+ + GH ++ + D V +AS+D+ L+D TG L SL GH
Sbjct: 364 KKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGH 415
Score = 73 (30.8 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
L GH+ V W DG + +AS DR ++ G + ++L GH + + +S+ Y+
Sbjct: 244 LTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA 302
Score = 67 (28.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
L GH V W +D +++ S D ++DV+ + L GH +E
Sbjct: 412 LRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADE 460
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 150 (57.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH V +A P L SAS D TV+LW GK + +++ H+ +VN V+F PN+
Sbjct: 143 YKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEY 202
Query: 217 LVLSASGDKSVHIW 230
L+ S S D++V +W
Sbjct: 203 LLASGSADRTVKLW 216
Score = 135 (52.6 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 134 KVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT 192
+V + S + L KI R+ GH+ + + P L S S D ++LW +
Sbjct: 77 RVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRR 136
Query: 193 GKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 233
CV +Y GH+ +V + F P+ + SAS D +V +W +
Sbjct: 137 KGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLI 177
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 137 (53.3 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 126 KLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRT 184
+L T +L V S+ S + L KI R+ GH+ + + P + S S D
Sbjct: 74 RLNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 132
Query: 185 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
++LW + CV +Y GHS +V +RF P+ + SA+ D +V +W
Sbjct: 133 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 178
Score = 116 (45.9 bits), Expect = 0.00010, P = 0.00010
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH V + P L SA+ D TV+LW GK + ++ GH+G VN V F PN+
Sbjct: 147 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY 206
Query: 217 LV 218
L+
Sbjct: 207 LL 208
Score = 112 (44.5 bits), Expect = 0.00032, P = 0.00032
Identities = 34/154 (22%), Positives = 65/154 (42%)
Query: 175 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW---- 230
+L + D V LWS C++ +GH+ V SVR ++L+++ S S+ +W
Sbjct: 39 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 98
Query: 231 ----QAVINWE---CXXXXXXXXXXESKEPDESSITL-----RTPVKELLGHSNVVIAAD 278
+ ++ + C + +++I L + V GHS V
Sbjct: 99 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 158
Query: 279 WLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+ DG+ + +A+ D L+D+ G ++ GH
Sbjct: 159 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 192
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 145 (56.1 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 48/174 (27%), Positives = 71/174 (40%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNK 215
F+GH+D V V P +L S S D+TVR+W G+ + + H+ +V SV F +
Sbjct: 19 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV-FRAHTATVRSVHFCSDG 77
Query: 216 DLVLSASGDKSVHIWQAV-----------INW-ECXXXXXXXXXXESKEPDESSITL--- 260
++AS DK+V +W INW C S D+ ++ L
Sbjct: 78 QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSAS-DDKTVKLWDK 136
Query: 261 --RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
R V H V D+ G + A D ++DV T +LQ H
Sbjct: 137 SSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 190
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 47/159 (29%), Positives = 72/159 (45%)
Query: 172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW- 230
GQ + +AS D+TV++W+T K + S H V +F P+ L++SAS DK+V +W
Sbjct: 77 GQSFV-TASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 135
Query: 231 ---QAVINWECXXXXXXXXXXESKEPDESSIT---LRTPVK-------ELLGHSNVVIAA 277
+ ++ C P + I + VK LL H + AA
Sbjct: 136 KSSRECVHSYCEHGGFVTYV--DFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAA 193
Query: 278 -DWLS---DGEQVITASWDRVANLFDVETGTILQSLTGH 312
+ LS G +ITAS D + D+ G +L +L GH
Sbjct: 194 VNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGH 232
Score = 115 (45.5 bits), Expect = 0.00057, P = 0.00057
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
S S H + V P ++ SAS D+TV+LW + +CV Y H G V V F P+
Sbjct: 102 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSG 161
Query: 216 DLVLSASGDKSVHIW 230
+ +A D +V +W
Sbjct: 162 TCIAAAGMDNTVKVW 176
Score = 115 (45.5 bits), Expect = 0.00057, P = 0.00057
Identities = 30/106 (28%), Positives = 50/106 (47%)
Query: 126 KLKTTNKLKVQTS--KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADR 183
K +L V S K V + S C + S+ H V V P + +A D
Sbjct: 114 KFSPDGRLIVSASDDKTVKLWDKSSREC--VHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 171
Query: 184 TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229
TV++W +T + + Y HS +VN + F P+ + +++AS D ++ I
Sbjct: 172 TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 217
>UNIPROTKB|Q17BB0 [details] [associations]
symbol:AAEL005041 "Ribosome biogenesis protein WDR12
homolog" species:7159 "Aedes aegypti" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 EMBL:CH477324 RefSeq:XP_001650205.1
ProteinModelPortal:Q17BB0 STRING:Q17BB0
EnsemblMetazoa:AAEL005041-RA GeneID:5565845
KEGG:aag:AaeL_AAEL005041 VectorBase:AAEL005041 HOGENOM:HOG000264464
OMA:LQTRFFT OrthoDB:EOG4BNZTB PhylomeDB:Q17BB0 HAMAP:MF_03029
Uniprot:Q17BB0
Length = 427
Score = 146 (56.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 40/154 (25%), Positives = 65/154 (42%)
Query: 163 GVWDVAVRPGQPVLGSASADRTVRLWS----TQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
GV +++ + V SAS D+TV LW + +CV GH V+ + +K +
Sbjct: 155 GVTWISLDEEKGVFASASQDQTVMLWEWNVKANSVECVQVCKGHERGVDCIAANRSKTRM 214
Query: 219 LSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVVIAAD 278
+ S D + IW + + SK + RTPV L GH +
Sbjct: 215 ATGSWDTMLKIWSTDVRND-----GDSQPSTSKRQKLDTEKARTPVLTLAGHRECISGVQ 269
Query: 279 WLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
W+ D ++T+SWD ++D+ I + GH
Sbjct: 270 WIDDNT-LVTSSWDHTIKIWDLALSGIKSEICGH 302
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 137 (53.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 126 KLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRT 184
+L T +L V S+ S + L KI R+ GH+ + + P + S S D
Sbjct: 70 RLNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 185 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
++LW + CV +Y GHS +V +RF P+ + SA+ D +V +W
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Score = 129 (50.5 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 27/68 (39%), Positives = 37/68 (54%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH V + P L SA+ D TV+LW GK + ++ GH+G VN V F PN+
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY 202
Query: 217 LVLSASGD 224
L+ S S D
Sbjct: 203 LLASGSSD 210
Score = 112 (44.5 bits), Expect = 0.00033, P = 0.00033
Identities = 34/154 (22%), Positives = 65/154 (42%)
Query: 175 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW---- 230
+L + D V LWS C++ +GH+ V SVR ++L+++ S S+ +W
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 231 ----QAVINWE---CXXXXXXXXXXESKEPDESSITL-----RTPVKELLGHSNVVIAAD 278
+ ++ + C + +++I L + V GHS V
Sbjct: 95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 279 WLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+ DG+ + +A+ D L+D+ G ++ GH
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Score = 104 (41.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 20/82 (24%), Positives = 40/82 (48%)
Query: 150 SCYKIRSFSGHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNS 208
+ +K++ H V + + + +L + D V LWS C++ +GH+ V S
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVES 68
Query: 209 VRFLPNKDLVLSASGDKSVHIW 230
VR ++L+++ S S+ +W
Sbjct: 69 VRLNTPEELIVAGSQSGSIRVW 90
Score = 55 (24.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 22/92 (23%), Positives = 39/92 (42%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS- 322
++ L+GH + + D+ GE V + S D L+D+ + GH + L S
Sbjct: 98 LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP 157
Query: 323 --SYYSKVSCDLFQRIQHLDCGT--SENPIHS 350
+ + + D ++ L G SE P H+
Sbjct: 158 DGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 144 (55.7 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 41/134 (30%), Positives = 63/134 (47%)
Query: 100 NDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSG 159
+D ECVT + + N+ K +A PS L T ++ K + + + C + S
Sbjct: 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK--SVWVWEVDEEDEYECVSV--LSS 148
Query: 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPNKDL 217
H V V P Q +L SAS D TV+L+ + C GH +V S+ F P+
Sbjct: 149 HTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQR 208
Query: 218 VLSASGDKSVHIWQ 231
+ S S D++V IW+
Sbjct: 209 LASCSDDRTVRIWR 222
Score = 120 (47.3 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 30/83 (36%), Positives = 41/83 (49%)
Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNS 208
C + S GH+ V VA P L SAS D T +W +CV GH V S
Sbjct: 52 CKSVLS-EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKS 110
Query: 209 VRFLPNKDLVLSASGDKSVHIWQ 231
V + P+ +L+ + S DKSV +W+
Sbjct: 111 VAWAPSGNLLATCSRDKSVWVWE 133
Score = 42 (19.8 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG--TILQSLTGHD 313
V L H+ V W E + +AS+D L+ E +L GH+
Sbjct: 143 VSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHE 194
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 128 (50.1 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 34/108 (31%), Positives = 55/108 (50%)
Query: 128 KTTNKLKVQTSKIVSSFKT-SLLSCYKIRSFSGHRDGVWDVAVRPG--QPVLGSASADRT 184
K TN+ T+ + + K S+ S + + GH G+ V G +P L S + D+
Sbjct: 154 KDTNQFA--TASLDKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGGEKPYLISGADDKL 211
Query: 185 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA 232
V++W Q+ CV GHS +V+ V + P L+LS S D +V +W +
Sbjct: 212 VKIWDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSGSEDGTVKLWHS 259
Score = 116 (45.9 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ-YSGHSGSVNSVRF 211
KI+SF H D + + V P P + S+S D ++LW + G Q + GHS V S+ +
Sbjct: 92 KIKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLWDYEKGWSNTQVFEGHSHYVMSIAW 151
Query: 212 LPNKDL--VLSASGDKSVHIW 230
P KD +AS DK+V +W
Sbjct: 152 NP-KDTNQFATASLDKTVKVW 171
Score = 82 (33.9 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 257 SITLRTPVKELLGHSNVVIAADWLSDGEQ--VITASWDRVANLFDVETGTILQSLTGHDE 314
SI P L GH + + ++ S GE+ +I+ + D++ ++D ++ T +Q+L GH
Sbjct: 172 SINSPHPHFTLEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWDYQSKTCVQTLEGHSN 231
Query: 315 EPHILC 320
++C
Sbjct: 232 NVSVVC 237
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 149 (57.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GH V P + + S+DRTVRLW G CV ++GH G ++S+ F P
Sbjct: 576 LRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSP 635
Query: 214 NKDLVLSASGDKSVHIW 230
N + S S D V +W
Sbjct: 636 NGKFLASGSTDGRVLLW 652
Score = 144 (55.7 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 43/161 (26%), Positives = 66/161 (40%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH VWD P S DR RLW+T + + ++GH V RF PN +
Sbjct: 537 YKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN 596
Query: 217 LVLSASGDKSVHIWQAVINWECXXXXXXXXX---XESKEPD---------ESSITL---- 260
V + S D++V +W V+N C + P+ + + L
Sbjct: 597 YVATGSSDRTVRLWD-VLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIG 655
Query: 261 -RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDV 300
+ EL GH+ + A + DGE + + S D L+DV
Sbjct: 656 HGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 129 (50.5 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 23/80 (28%), Positives = 43/80 (53%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GH+ + +A P L S S D V LW G + + GH+G++ +++F
Sbjct: 618 VRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSR 677
Query: 214 NKDLVLSASGDKSVHIWQAV 233
+ +++ S S D +V +W +
Sbjct: 678 DGEIIASGSIDNTVRLWDVM 697
Score = 126 (49.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 38/115 (33%), Positives = 53/115 (46%)
Query: 116 KVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPV 175
K L SA L +K + + KTS S KI GH V+ V+ P +
Sbjct: 458 KKLRKVKSAADLNLIDKESDDVLERIMDEKTSSES--KI--LHGHSGPVYGVSFSPDRNY 513
Query: 176 LGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
L S+S D T+RLWS QT C++ Y GH+ V +F P +S D+ +W
Sbjct: 514 LLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLW 568
Score = 50 (22.7 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
V+ GH + + + +G+ + + S D L+D+ G ++ L GH
Sbjct: 618 VRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGH 666
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 145 (56.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 48/174 (27%), Positives = 71/174 (40%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNK 215
F+GH+D V V P +L S S D+TVR+W G+ + + H+ +V SV F +
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV-FRAHTATVRSVHFCSDG 115
Query: 216 DLVLSASGDKSVHIWQAV-----------INW-ECXXXXXXXXXXESKEPDESSITL--- 260
++AS DK+V +W INW C S D+ ++ L
Sbjct: 116 QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSAS-DDKTVKLWDK 174
Query: 261 --RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
R V H V D+ G + A D ++DV T +LQ H
Sbjct: 175 SSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 228
Score = 135 (52.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 47/174 (27%), Positives = 68/174 (39%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R F GHRD V V L S S D + +W + +++GH +V V F P+
Sbjct: 13 RHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 215 KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKE---PDESSITLRTP--VK---- 265
L+ S S DK+V IW + E S +S +T VK
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWAT 132
Query: 266 -------ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
L H N V A + DG +++AS D+ L+D + + S H
Sbjct: 133 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEH 186
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 47/159 (29%), Positives = 72/159 (45%)
Query: 172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW- 230
GQ + +AS D+TV++W+T K + S H V +F P+ L++SAS DK+V +W
Sbjct: 115 GQSFV-TASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 231 ---QAVINWECXXXXXXXXXXESKEPDESSIT---LRTPVK-------ELLGHSNVVIAA 277
+ ++ C P + I + VK LL H + AA
Sbjct: 174 KSSRECVHSYCEHGGFVTYV--DFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAA 231
Query: 278 -DWLS---DGEQVITASWDRVANLFDVETGTILQSLTGH 312
+ LS G +ITAS D + D+ G +L +L GH
Sbjct: 232 VNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGH 270
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 26/75 (34%), Positives = 38/75 (50%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
S S H + V P ++ SAS D+TV+LW + +CV Y H G V V F P+
Sbjct: 140 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 216 DLVLSASGDKSVHIW 230
+ +A D +V +W
Sbjct: 200 TCIAAAGMDNTVKVW 214
Score = 115 (45.5 bits), Expect = 0.00067, P = 0.00067
Identities = 30/106 (28%), Positives = 50/106 (47%)
Query: 126 KLKTTNKLKVQTS--KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADR 183
K +L V S K V + S C + S+ H V V P + +A D
Sbjct: 152 KFSPDGRLIVSASDDKTVKLWDKSSREC--VHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 184 TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229
TV++W +T + + Y HS +VN + F P+ + +++AS D ++ I
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 255
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 124 (48.7 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 40/140 (28%), Positives = 64/140 (45%)
Query: 176 LGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ--- 231
L S S D T+ LWS + K + + +GH +N V F P+ ++ SAS DKS+ +W
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 403
Query: 232 ----AVINWECXXXXXXXXXXESK--EPDESSITLRT-PVK------ELLGHSNVVIAAD 278
A + +S+ S TL+ VK +L GH++ V A D
Sbjct: 404 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVD 463
Query: 279 WLSDGEQVITASWDRVANLF 298
W DG++V + D+ ++
Sbjct: 464 WSPDGQRVASGGKDKCLRIW 483
Score = 118 (46.6 bits), Expect = 0.00041, P = 0.00041
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 217
+GH+ + V P ++ SAS D++++LW +TGK + GH +V + + + L
Sbjct: 369 TGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 428
Query: 218 VLSASGDKSVHIW 230
++S S D ++ +W
Sbjct: 429 LVSGSSDSTLKVW 441
Score = 114 (45.2 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 155 RSFSGHRDGV----WD-VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 209
R+ +GH + W+ + P + S+S D +VR+W T G+C +GH+ SV +
Sbjct: 193 RALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCL 252
Query: 210 RFLPNKDLVLSASGDKSVHIWQA 232
R+ L+ SAS D+++ +W+A
Sbjct: 253 RW-GGDGLLYSASQDRTIKVWRA 274
Score = 93 (37.8 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 32/112 (28%), Positives = 48/112 (42%)
Query: 128 KTTNKLKVQTSKIVSSFKTSLLSCYKIR-------SFSGHRDGVWDVAVRPGQPVLGSAS 180
KT V+T K++ + +++R S GH + V VA P L S S
Sbjct: 75 KTLESQAVETEKVLDIIYQPQ-AVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGS 133
Query: 181 ADRTVRLW--STQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
D TVR W ST+T Q GH V S+ + P+ + S + + +W
Sbjct: 134 GDTTVRFWDLSTETPHFTCQ--GHRHWVLSISWSPDGKKLASGCKNGQILLW 183
Score = 83 (34.3 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 25/78 (32%), Positives = 38/78 (48%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ-YSGHSGSVNSVRFLP---N 214
GHR V ++ P L S + + LW TGK V + +GHS + ++ + P N
Sbjct: 154 GHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHAN 213
Query: 215 KDL--VLSASGDKSVHIW 230
+ V S+S D SV +W
Sbjct: 214 PECRYVASSSKDGSVRVW 231
Score = 76 (31.8 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 261 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+ P+ + GH ++ + D + +AS+D+ L+D TG L SL GH
Sbjct: 362 KKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGH 413
Score = 75 (31.5 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 24/101 (23%), Positives = 40/101 (39%)
Query: 230 WQAVINWECXXXXXXXXXXESKEPDESSITLRTPV----KELLGHSNVVIAADWLSDGEQ 285
W ++WE S D S T + L GH+ V W DG
Sbjct: 201 WITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-L 259
Query: 286 VITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
+ +AS DR ++ G + ++L GH + + +S+ Y+
Sbjct: 260 LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA 300
Score = 67 (28.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
L GH V W +D +++ S D ++DV+ + L GH +E
Sbjct: 410 LRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADE 458
>FB|FBgn0025724 [details] [associations]
symbol:beta'Cop "beta'-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0030126 "COPI vesicle
coat" evidence=NAS] [GO:0048194 "Golgi vesicle budding"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0010883
"regulation of lipid storage" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0010883 GO:GO:0006890
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:AJ006523 EMBL:AJ006524 EMBL:BT023906 EMBL:AY119527
RefSeq:NP_524836.2 UniGene:Dm.2980 ProteinModelPortal:O62621
SMR:O62621 DIP:DIP-22262N MINT:MINT-1636818 STRING:O62621
PaxDb:O62621 PRIDE:O62621 EnsemblMetazoa:FBtr0080469 GeneID:45757
KEGG:dme:Dmel_CG6699 CTD:45757 FlyBase:FBgn0025724
InParanoid:O62621 OrthoDB:EOG4VHHN9 PhylomeDB:O62621
ChiTaRS:beta'Cop GenomeRNAi:45757 NextBio:838315 Bgee:O62621
GermOnline:CG6699 Uniprot:O62621
Length = 914
Score = 124 (48.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 28/86 (32%), Positives = 48/86 (55%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRF 211
K+ SF H D + +AV P QP++ ++S D ++LW+ + C + GH+ V + F
Sbjct: 91 KVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHTHYVMQIVF 150
Query: 212 LP-NKDLVLSASGDKSVHIWQAVINW 236
P + + SAS D++V +WQ N+
Sbjct: 151 NPKDNNTFASASLDRTVKVWQLGSNF 176
Score = 122 (48.0 bits), Expect = 0.00034, P = 0.00034
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 156 SFSGHRDGVWDVAVRPG--QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+ GH GV V G +P L S + DR V++W Q CV GH+ ++++V F P
Sbjct: 180 TLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNISAVCFHP 239
Query: 214 NKDLVLSASGDKSVHIWQA 232
+VL+ S D +V IW +
Sbjct: 240 ELPIVLTGSEDGTVRIWHS 258
Score = 72 (30.4 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 267 LLGHSNVVIAADWLSDGEQ--VITASWDRVANLFDVETGTILQSLTGHDEEPHILC 320
L GH V D+ G++ +I+ + DR+ ++D + T +Q+L GH + +C
Sbjct: 181 LEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNISAVC 236
>UNIPROTKB|Q13112 [details] [associations]
symbol:CHAF1B "Chromatin assembly factor 1 subunit B"
species:9606 "Homo sapiens" [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0042393 "histone binding" evidence=NAS]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0033186
"CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin assembly"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=TAS]
[GO:0051082 "unfolded protein binding" evidence=TAS] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=TAS]
[GO:0006461 "protein complex assembly" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005737 GO:GO:0006461
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 GO:GO:0051082 GO:GO:0006281
eggNOG:COG2319 GO:GO:0006351 GO:GO:0003682 GO:GO:0007049
GO:GO:0042393 GO:GO:0006335 GO:GO:0033186 HOGENOM:HOG000183312
KO:K10751 OMA:VYDICWT CTD:8208 OrthoDB:EOG4G4GQD PRINTS:PR00319
EMBL:U20980 EMBL:AP000694 EMBL:AP001725 EMBL:BC021218 EMBL:X98262
IPI:IPI00011857 PIR:B56731 RefSeq:NP_005432.1 UniGene:Hs.75238
ProteinModelPortal:Q13112 SMR:Q13112 DIP:DIP-29243N IntAct:Q13112
STRING:Q13112 PhosphoSite:Q13112 DMDM:3121829 PaxDb:Q13112
PRIDE:Q13112 DNASU:8208 Ensembl:ENST00000314103 GeneID:8208
KEGG:hsa:8208 UCSC:uc002yvj.3 GeneCards:GC21P037757 HGNC:HGNC:1911
HPA:CAB033604 HPA:HPA021679 MIM:601245 neXtProt:NX_Q13112
PharmGKB:PA26447 HOVERGEN:HBG050780 InParanoid:Q13112
PhylomeDB:Q13112 ChiTaRS:CHAF1B GenomeRNAi:8208 NextBio:30919
Bgee:Q13112 CleanEx:HS_CHAF1B CleanEx:HS_MPP7 Genevestigator:Q13112
GermOnline:ENSG00000159259 Uniprot:Q13112
Length = 559
Score = 147 (56.8 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 46/173 (26%), Positives = 76/173 (43%)
Query: 176 LGSASADRTVRLWSTQTG---KCVLQY----SGHSGSVNSVRFLPNKDLVLSASGDKSVH 228
L SA D VR+W + G K ++++ + H+ +VN VRF P +++ S D +
Sbjct: 32 LASAGVDTNVRIWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPTGEILASGGDDAVIL 91
Query: 229 IWQAVINWECXXXXXXXXXXESKEPDESSITLR--TPVKELLGHSNVVIAADWLSDGEQV 286
+W+ N E ++ DE+ + T VK L GH V W +DG +
Sbjct: 92 LWKVNDNKEPEQIAF-------QDEDEAQLNKENWTVVKTLRGHLEDVYDICWATDGNLM 144
Query: 287 ITASWDRVANLFDVETGTILQSLTGHDEEPHILC---VSSYYSKVSCDLFQRI 336
+AS D A ++DV G + H + + Y + +SCD R+
Sbjct: 145 ASASVDNTAIIWDVSKGQKISIFNEHKSYVQGVTWDPLGQYVATLSCDRVLRV 197
>UNIPROTKB|E2RFV0 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:AAEX03006660 RefSeq:XP_853945.1 ProteinModelPortal:E2RFV0
Ensembl:ENSCAFT00000029577 GeneID:480619 KEGG:cfa:480619
NextBio:20855611 Uniprot:E2RFV0
Length = 421
Score = 104 (41.7 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 24/73 (32%), Positives = 37/73 (50%)
Query: 160 HRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDL 217
H + V D+ P G +L SAS D+T+R+W + G + GH V S F P+ +
Sbjct: 169 HTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSM 228
Query: 218 VLSASGDKSVHIW 230
+ S K+V +W
Sbjct: 229 LCSVGASKAVFLW 241
Score = 94 (38.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 173 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW 230
Q +L + + +++W TGK +L H+ V + F P+ L+L SAS DK++ +W
Sbjct: 140 QLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVW 198
Score = 85 (35.0 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
T +++L GH + V+A D+ DG + TAS+D ++D G IL GH
Sbjct: 247 TMIRKLEGHHHDVVACDFSPDGALLATASYDTRVYIWDPHNGDILMEF-GH 296
>UNIPROTKB|Q9Y6I7 [details] [associations]
symbol:WSB1 "WD repeat and SOCS box-containing protein 1"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Reactome:REACT_6900
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ EMBL:AF072880 EMBL:AF069313 EMBL:AF240696
EMBL:AL110243 EMBL:AF112205 EMBL:AF106683 EMBL:AL110269
EMBL:BC021110 IPI:IPI00107502 IPI:IPI00146203 IPI:IPI00794974
PIR:T14773 PIR:T14788 RefSeq:NP_056441.6 RefSeq:NP_599027.1
UniGene:Hs.446017 ProteinModelPortal:Q9Y6I7 SMR:Q9Y6I7
IntAct:Q9Y6I7 STRING:Q9Y6I7 PhosphoSite:Q9Y6I7 DMDM:20532298
PaxDb:Q9Y6I7 PRIDE:Q9Y6I7 DNASU:26118 Ensembl:ENST00000262394
Ensembl:ENST00000348811 GeneID:26118 KEGG:hsa:26118 UCSC:uc002gzd.1
UCSC:uc002gze.1 GeneCards:GC17P025621 HGNC:HGNC:19221 HPA:HPA003293
MIM:610091 neXtProt:NX_Q9Y6I7 PharmGKB:PA134867554
InParanoid:Q9Y6I7 PhylomeDB:Q9Y6I7 ChiTaRS:WSB1 GenomeRNAi:26118
NextBio:48120 ArrayExpress:Q9Y6I7 Bgee:Q9Y6I7 CleanEx:HS_WSB1
Genevestigator:Q9Y6I7 GermOnline:ENSG00000109046 Uniprot:Q9Y6I7
Length = 421
Score = 104 (41.7 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 24/73 (32%), Positives = 37/73 (50%)
Query: 160 HRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDL 217
H + V D+ P G +L SAS D+T+R+W + G + GH V S F P+ +
Sbjct: 169 HTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSM 228
Query: 218 VLSASGDKSVHIW 230
+ S K+V +W
Sbjct: 229 LCSVGASKAVFLW 241
Score = 94 (38.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 173 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW 230
Q +L + + +++W TGK +L H+ V + F P+ L+L SAS DK++ +W
Sbjct: 140 QLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVW 198
Score = 85 (35.0 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
T +++L GH + V+A D+ DG + TAS+D ++D G IL GH
Sbjct: 247 TMIRKLEGHHHDVVACDFSPDGALLATASYDTRVYIWDPHNGDILMEF-GH 296
>UNIPROTKB|B0W517 [details] [associations]
symbol:CPIJ001500 "Ribosome biogenesis protein WDR12
homolog" species:7176 "Culex quinquefasciatus" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545 GO:GO:0000463
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
HAMAP:MF_03029 EMBL:DS231840 RefSeq:XP_001843801.1
UniGene:Cpi.10498 ProteinModelPortal:B0W517 STRING:B0W517
GeneID:6033337 KEGG:cqu:CpipJ_CPIJ001500 VectorBase:CPIJ001500
Uniprot:B0W517
Length = 425
Score = 145 (56.1 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 38/154 (24%), Positives = 69/154 (44%)
Query: 163 GVWDVAVRPGQPVLGSASADRTVRLW----STQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
GV +++ + V SAS D+TV LW + + +CV GH V+ + +K +
Sbjct: 152 GVTWISLDEEKGVFASASQDQTVMLWEWNVAANSVECVQVCKGHERGVDCIAANGSKTKM 211
Query: 219 LSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVVIAAD 278
+ S D + IW + + ++ D+ S RTP+ L GH +
Sbjct: 212 ATGSWDTMLKIWSTDVR--SGGGDSEPSTSKRQKLDQGSA--RTPLMTLAGHRECISGVQ 267
Query: 279 WLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
W+ D ++T+SWD ++D+ I ++G+
Sbjct: 268 WIDDNT-LVTSSWDHTIKIWDLALNGIKSEISGN 300
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 103 (41.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSS 323
+ L GH + V +W +G +++AS D++ +FD+ T +Q+ GH +E L +
Sbjct: 286 ITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHP 345
Query: 324 YYSK--VSCDLFQRIQHLDCGTSENP--IHS 350
Y+ VS D +I + G E IHS
Sbjct: 346 YHEDLFVSGDKDGKILYWIVGNPEPQAEIHS 376
Score = 91 (37.1 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 21/82 (25%), Positives = 37/82 (45%)
Query: 154 IRSFSGHRDG-VWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVL--QYSGHSGSVNSVR 210
++ F H + ++ P L S + D+ +++W +C Q GH V V
Sbjct: 201 VKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDF--ARCTEDNQLVGHGWDVKCVS 258
Query: 211 FLPNKDLVLSASGDKSVHIWQA 232
+ P K L++S D ++ IW A
Sbjct: 259 WHPQKSLIVSGGKDNNIKIWDA 280
Score = 65 (27.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 175 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI 234
V GS+S + T LW+ T H +V S+ + N+D ++S ++ WQ +
Sbjct: 141 VTGSSSGEFT--LWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVSGDDSGNIKYWQPNM 198
Query: 235 N 235
N
Sbjct: 199 N 199
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 147 (56.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 48/153 (31%), Positives = 79/153 (51%)
Query: 80 DMLMEKLDRESIINEKYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSK 139
D ++ DRE+ + E+ E DM +T+ + + N K + N Q+++ N ++ K
Sbjct: 424 DSVISLFDREATV-ERLIEEEDM--ITSFSLS-NDNKYILVNLLNQEIRLWN-IEGDP-K 477
Query: 140 IVSSFKTSLLSCYKIRS-FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQ 198
IVS +K S + IRS F G++ Q + S S D V +W TGK +++
Sbjct: 478 IVSRYKGHKRSRFIIRSCFGGYK-----------QAFIASGSEDSQVYIWHRSTGKLIVE 526
Query: 199 YSGHSGSVNSVRFLP-NKDLVLSASGDKSVHIW 230
GH+G+VN V + P N ++ SAS D ++ IW
Sbjct: 527 LPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
>ASPGD|ASPL0000040628 [details] [associations]
symbol:AN2997 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016282
"eukaryotic 43S preinitiation complex" evidence=IEA] [GO:0071541
"eukaryotic translation initiation factor 3 complex, eIF3m"
evidence=IEA] [GO:0034399 "nuclear periphery" evidence=IEA]
[GO:0071540 "eukaryotic translation initiation factor 3 complex,
eIF3e" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001306 EMBL:AACD01000051
GO:GO:0003743 HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008
OMA:ATVAGWS RefSeq:XP_660601.1 ProteinModelPortal:Q5B8Y3
STRING:Q5B8Y3 EnsemblFungi:CADANIAT00010083 GeneID:2874320
KEGG:ani:AN2997.2 OrthoDB:EOG44QX8Q Uniprot:Q5B8Y3
Length = 336
Score = 143 (55.4 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 42/166 (25%), Positives = 77/166 (46%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
++ ++SGH +W V V P +L + SAD +VRLW+ +TG+CV + + +V V F
Sbjct: 44 RLGTYSGHLGAIWTVDVSPNTVLLATGSADNSVRLWNVKTGECVKVWEFPT-AVKRVEFS 102
Query: 213 PNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSN 272
P+ VL+ + + + + +++EP +LR E S
Sbjct: 103 PDGSKVLAVTEKRMGFLGTIAV---LDINYDGDFTNQAEEP-----SLRITCTE----SK 150
Query: 273 VVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI 318
+A W G+ +I D + +D +TG L+++ H+ + I
Sbjct: 151 ATVAG-WSYLGKYIIAGHEDGSVSQYDAKTGEQLENVQAHEFDHQI 195
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 123 (48.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 40/144 (27%), Positives = 65/144 (45%)
Query: 172 GQPVLGSASADRTVRLWS-TQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
G L S S D T+ +WS + K + + +GH +N V F P+ ++ SAS DKS+ +W
Sbjct: 291 GPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLW 350
Query: 231 Q-------AVINWECXXXXXXXXXXESK--EPDESSITLRT-PVK------ELLGHSNVV 274
A + +S+ S TL+ VK +L GH++ V
Sbjct: 351 DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEV 410
Query: 275 IAADWLSDGEQVITASWDRVANLF 298
A DW DG++V + D+ ++
Sbjct: 411 YAVDWSPDGQRVASGGKDKCLRIW 434
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 217
+GH+ + V P ++ SAS D++++LW +TGK + GH +V + + + L
Sbjct: 320 TGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 379
Query: 218 VLSASGDKSVHIW 230
++S S D ++ +W
Sbjct: 380 LVSGSSDSTLKVW 392
Score = 112 (44.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 26/83 (31%), Positives = 45/83 (54%)
Query: 155 RSFSGHRDGV----WD-VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 209
R +GH + W+ + P + S+S D +VR+W T G+C +GH+ SV +
Sbjct: 144 RVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCL 203
Query: 210 RFLPNKDLVLSASGDKSVHIWQA 232
R+ L+ SAS D+++ +W+A
Sbjct: 204 RW-GGDGLLYSASQDRTIKVWRA 225
Score = 94 (38.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 32/112 (28%), Positives = 48/112 (42%)
Query: 128 KTTNKLKVQTSKIVSSFKTSLLSCYKIR-------SFSGHRDGVWDVAVRPGQPVLGSAS 180
KT V+T K++ + +++R S GH + V VA P L S S
Sbjct: 26 KTLESQAVETEKVLDIIYQPQ-AIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGS 84
Query: 181 ADRTVRLW--STQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
D TVR W ST+T Q GH V S+ + P+ + S + + +W
Sbjct: 85 GDTTVRFWDLSTETPHFTCQ--GHRHWVLSISWSPDGKTLASGCKNGQILLW 134
Score = 76 (31.8 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 261 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+ P+ + GH ++ + D + +AS+D+ L+D TG L SL GH
Sbjct: 313 KKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGH 364
Score = 73 (30.8 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
L GH+ V W DG + +AS DR ++ G + ++L GH + + +S+ Y+
Sbjct: 193 LTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA 251
Score = 67 (28.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
L GH V W +D +++ S D ++DV+ + L GH +E
Sbjct: 361 LRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADE 409
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 149 (57.5 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 147 SLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 206
SLL+ + ++ GH VWDV P S S D+T RLW+T + + + + GH V
Sbjct: 478 SLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDV 537
Query: 207 NSVRFLPNKDLVLSASGDKSVHIW 230
+ V+F PN + V + S D++V +W
Sbjct: 538 DCVQFHPNSNYVATGSSDRTVRLW 561
Score = 146 (56.5 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 47/174 (27%), Positives = 75/174 (43%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
RS GH V+ A P +L S S D T+RLWS T CV+ Y GH V VRF P+
Sbjct: 444 RSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPH 503
Query: 215 KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKE--PDESSI-------TLRT--- 262
+S S DK+ +W N + + P+ + + T+R
Sbjct: 504 GYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDN 563
Query: 263 ----PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
V+ + GH V + + + G + + S D ++D+ G+++ +L H
Sbjct: 564 MTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRH 617
Score = 135 (52.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 30/77 (38%), Positives = 41/77 (53%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F GH V V P + + S+DRTVRLW TG+ V +GH GSV+S+ F
Sbjct: 527 LRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSA 586
Query: 214 NKDLVLSASGDKSVHIW 230
+ S S D ++ IW
Sbjct: 587 CGRYLASGSVDHNIIIW 603
Score = 41 (19.5 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
V LL H++ V + DG + A D L+D
Sbjct: 611 VTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWD 646
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 148 (57.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 45/174 (25%), Positives = 75/174 (43%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R GH V+ V+ P L S S D+TVRLWS T ++ Y GH+ V V+F P
Sbjct: 511 RKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPL 570
Query: 215 KDLVLSASGDKSVHIWQA------------VINWECXXXXXXXXXXESKEPDES----SI 258
++AS D++ +W + + +C + D++ +
Sbjct: 571 GHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDV 630
Query: 259 TLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
V+ LGH+N V DG + + D + ++D+ +G L+S+ GH
Sbjct: 631 HTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGH 684
Score = 132 (51.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 26/79 (32%), Positives = 41/79 (51%)
Query: 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 211
Y +R F+GH + V V P + + S+D+T R+W TG CV + GH+ SVN +
Sbjct: 592 YPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAV 651
Query: 212 LPNKDLVLSASGDKSVHIW 230
P+ + S D + +W
Sbjct: 652 SPDGRWLASGGEDGIICVW 670
Score = 118 (46.6 bits), Expect = 0.00080, P = 0.00080
Identities = 62/265 (23%), Positives = 111/265 (41%)
Query: 83 MEKLDRESIINEKYP----ECNDME-CVTNMNKNFNKQK---VLASNPSAQKLKTTNKLK 134
M K D++S + E P + ND++ + + + +K K + AS PS + T +
Sbjct: 403 MTKPDQDSPVRESLPLPLKDANDIKKMIIQVEDSRSKIKLGAIQASLPSVC-MYTFHNTN 461
Query: 135 VQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK 194
+ I + ++L++ F +W + G+P+ DR +T+ K
Sbjct: 462 NNMTCIEFNDDSTLVAA----GFQDSYIKLWSL---DGKPLKSVLKRDRHKPQENTR--K 512
Query: 195 CVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ-----AVIN--------WECXXX 241
+ GHSG V V F P+ +LS S DK+V +W A+++ W+
Sbjct: 513 LI----GHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFS 568
Query: 242 XXXXXXXESKEPDESSITLRT----PVKELLGHSNVVIAADWLSDGEQVITASWDRVANL 297
+ D+++ T P++ GH N V ++ + V T S D+ +
Sbjct: 569 PLGHYFVTASH-DQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRM 627
Query: 298 FDVETGTILQSLTGHDEEPHILCVS 322
+DV TG ++ GH + L VS
Sbjct: 628 WDVHTGNCVRVFLGHTNSVNCLAVS 652
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 144 (55.7 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 46/192 (23%), Positives = 80/192 (41%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
++ + +GH + ++ + + S D TV +W TG+ V GH ++S F
Sbjct: 211 EVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFS 270
Query: 213 PNKDLVLSASGDKSVHIWQAV--------------INWECXXXXXXXXXXESKEPDES-- 256
+ L+L+ S DK+ +W A I C S +
Sbjct: 271 WDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVY 330
Query: 257 SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEP 316
+ T R + +L GH + + G +++T S D+ A ++DV+TG LQ L GH +E
Sbjct: 331 NATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEI 390
Query: 317 HILCVSSYYSKV 328
C +Y +
Sbjct: 391 -FSCAFNYKGNI 401
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 34/113 (30%), Positives = 59/113 (52%)
Query: 120 SNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSA 179
+NP K+ T + K T K+ S+ +T CY +F GH + ++ P V+ +
Sbjct: 143 NNPYGDKIATGSFDK--TCKLWSA-ETG--KCY--HTFRGHTAEIVCLSFNPQSTVVATG 195
Query: 180 SADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQA 232
S D T +LW Q+G+ V+ +GH + S+ F + D +++ S D +V +W A
Sbjct: 196 SMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDA 248
Score = 124 (48.7 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I GH + ++ P L + S+D+T R+W QTG+C+ GH+ + S F
Sbjct: 338 ITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNY 397
Query: 214 NKDLVLSASGDKSVHIWQ 231
++V++ S D S IW+
Sbjct: 398 KGNIVITGSKDNSCRIWR 415
Score = 87 (35.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 22/82 (26%), Positives = 38/82 (46%)
Query: 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 211
Y + H + +VA+ + S DRT ++W T +G+ + GH V ++ F
Sbjct: 83 YLFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAF 142
Query: 212 L-PNKDLVLSASGDKSVHIWQA 232
P D + + S DK+ +W A
Sbjct: 143 NNPYGDKIATGSFDKTCKLWSA 164
Score = 72 (30.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
GH+ ++ + V T S D A L+D+++G + +LTGH
Sbjct: 175 GHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGH 218
>DICTYBASE|DDB_G0267382 [details] [associations]
symbol:corA "coronin" species:44689 "Dictyostelium
discoideum" [GO:0001891 "phagocytic cup" evidence=IBA;IDA]
[GO:0006909 "phagocytosis" evidence=IEP] [GO:0030863 "cortical
cytoskeleton" evidence=IDA] [GO:0031982 "vesicle" evidence=IDA]
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0009617
"response to bacterium" evidence=IEP] [GO:0006972 "hyperosmotic
response" evidence=IEP] [GO:0005885 "Arp2/3 protein complex"
evidence=ISS] [GO:0051126 "negative regulation of actin nucleation"
evidence=ISS] [GO:0007015 "actin filament organization"
evidence=ISS] [GO:0006897 "endocytosis" evidence=TAS] [GO:0051707
"response to other organism" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0051015 "actin filament binding"
evidence=IDA] [GO:0042995 "cell projection" evidence=IDA]
[GO:0051286 "cell tip" evidence=IDA] [GO:0043327 "chemotaxis to
cAMP" evidence=IMP] [GO:0006928 "cellular component movement"
evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0030864 "cortical actin
cytoskeleton" evidence=IBA] [GO:0030835 "negative regulation of
actin filament depolymerization" evidence=IBA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0060187 "cell pole" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267382 GO:GO:0009986
GenomeReviews:CM000150_GR GO:GO:0045335 GO:GO:0009617 GO:GO:0007015
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006909 GO:GO:0051015
EMBL:AAFI02000003 GO:GO:0006928 GO:GO:0006972 GO:GO:0000910
GO:GO:0042995 GO:GO:0001891 GO:GO:0030864 GO:GO:0051126
GO:GO:0030835 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
EMBL:X61480 PIR:S18663 RefSeq:XP_647343.1 ProteinModelPortal:P27133
STRING:P27133 EnsemblProtists:DDB0191115 GeneID:8616153
KEGG:ddi:DDB_G0267382 OMA:PVLDIKW ProtClustDB:CLSZ2431531
Uniprot:P27133
Length = 445
Score = 100 (40.3 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 28/83 (33%), Positives = 41/83 (49%)
Query: 157 FSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCV------LQ-YSGHSGSVNS 208
F+GH+ V D+A P + ++GS S D + +W G LQ SGH V +
Sbjct: 75 FNGHKSAVLDIAFHPFNENLVGSVSEDCNICIWGIPEGGLTDSISTPLQTLSGHKRKVGT 134
Query: 209 VRFLPNKDLV-LSASGDKSVHIW 230
+ F P D V +++SGD V W
Sbjct: 135 ISFNPVADNVAVTSSGDFLVKTW 157
Score = 89 (36.4 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
GHS+++ + +W +G Q++T D+ A +FD T +I+ + H
Sbjct: 170 GHSDMITSCEWNHNGSQIVTTCKDKKARVFDPRTNSIVNEVVCH 213
>UNIPROTKB|B4MU54 [details] [associations]
symbol:GK23981 "Ribosome biogenesis protein WDR12 homolog"
species:7260 "Drosophila willistoni" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
EMBL:CH963852 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB
HAMAP:MF_03029 RefSeq:XP_002064657.1 ProteinModelPortal:B4MU54
STRING:B4MU54 EnsemblMetazoa:FBtr0254632 GeneID:6641752
KEGG:dwi:Dwil_GK23981 FlyBase:FBgn0225943 InParanoid:B4MU54
Uniprot:B4MU54
Length = 423
Score = 144 (55.7 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 36/127 (28%), Positives = 57/127 (44%)
Query: 178 SASADRTVRLWS----TQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 233
S+S D+TV LW + +CV GH V+S+ P+ + S D + +W A
Sbjct: 166 SSSQDQTVMLWQWNVDSNAVECVSICKGHERGVDSISVSPDATRFATGSWDTMLKVWSAA 225
Query: 234 INWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR 293
+ SK P E+ + RTP+ L GH + A W+ D ++T SWD
Sbjct: 226 ED------DAGGDAASSKRPKENGV--RTPIMTLQGHRESISAVQWI-DTSTLLTTSWDH 276
Query: 294 VANLFDV 300
++D+
Sbjct: 277 TMKIWDL 283
>ZFIN|ZDB-GENE-030131-1946 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing 1"
species:7955 "Danio rerio" [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-030131-1946 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HSSP:P16649 EMBL:BC054567
IPI:IPI00486577 RefSeq:NP_955927.1 UniGene:Dr.33037
ProteinModelPortal:Q7T2F6 STRING:Q7T2F6 Ensembl:ENSDART00000008854
GeneID:323226 KEGG:dre:323226 CTD:26118 HOGENOM:HOG000063727
HOVERGEN:HBG034543 InParanoid:Q7T2F6 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ NextBio:20808143 Bgee:Q7T2F6 Uniprot:Q7T2F6
Length = 423
Score = 103 (41.3 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 26/73 (35%), Positives = 36/73 (49%)
Query: 160 HRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDL 217
H D V D+ P G VL SAS D+T+R+W + G V GH V F P+ +
Sbjct: 170 HTDIVRDLTFAPDGSLVLVSASRDKTLRVWDLKDDGNMVKVLRGHQNWVYCSAFSPDSSV 229
Query: 218 VLSASGDKSVHIW 230
+ S K+V +W
Sbjct: 230 LCSVGAGKAVFLW 242
Score = 97 (39.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 173 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW 230
Q +L + + +++W TGK +L H+ V + F P+ LVL SAS DK++ +W
Sbjct: 141 QLLLATGLNNGRIKIWDVYTGKLLLNLMDHTDIVRDLTFAPDGSLVLVSASRDKTLRVW 199
Score = 85 (35.0 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
T +++L GH N V+ ++ DG + TAS+D ++D T T+L L GH
Sbjct: 248 TLIRKLEGHHNDVVCCEFSPDGALLATASYDTRVIVWDPHTATVLLEL-GH 297
Score = 66 (28.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILC 320
VK L GH N V + + D + + + L+D++ T+++ L GH + ++C
Sbjct: 208 VKVLRGHQNWVYCSAFSPDSSVLCSVGAGKAVFLWDMDKYTLIRKLEGHHND--VVC 262
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 146 (56.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH V + P L SA+ D TV+LW GK + ++ GH+G VN V F PN+
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY 202
Query: 217 LVLSASGDKSVHIW 230
L+ S S D+++ W
Sbjct: 203 LLASGSSDRTIRFW 216
Score = 137 (53.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 126 KLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRT 184
+L T +L V S+ S + L KI R+ GH+ + + P + S S D
Sbjct: 70 RLNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 185 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
++LW + CV +Y GHS +V +RF P+ + SA+ D +V +W
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Score = 104 (41.7 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 20/82 (24%), Positives = 40/82 (48%)
Query: 150 SCYKIRSFSGHRDGVWDVAV-RPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNS 208
+ +K++ H V + + + +L + D V LWS C++ +GH+ V S
Sbjct: 9 TAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVES 68
Query: 209 VRFLPNKDLVLSASGDKSVHIW 230
VR ++L+++ S S+ +W
Sbjct: 69 VRLNTPEELIVAGSQSGSIRVW 90
Score = 55 (24.4 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 22/92 (23%), Positives = 39/92 (42%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS- 322
++ L+GH + + D+ GE V + S D L+D+ + GH + L S
Sbjct: 98 LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP 157
Query: 323 --SYYSKVSCDLFQRIQHLDCGT--SENPIHS 350
+ + + D ++ L G SE P H+
Sbjct: 158 DGKWLASAADDHTVKLWDLTAGKMMSEFPGHT 189
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 128 (50.1 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 154 IRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
+RS +GH V DV + GQ L S S D+T+RLW G Q+ H+ V SV F
Sbjct: 62 VRSLTGHNHFVSDVVISSDGQFAL-SGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFS 120
Query: 213 PNKDLVLSASGDKSVHIWQAV 233
+ ++S S DKS+ +W +
Sbjct: 121 ADNRQIVSGSRDKSIKLWNTL 141
Score = 53 (23.7 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 268 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
+GH+ V DG + D A L+D+ G L +L G+D
Sbjct: 195 IGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGND 240
Score = 43 (20.2 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 8/37 (21%), Positives = 20/37 (54%)
Query: 286 VITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
+++A WD+V ++++ + + GH + + VS
Sbjct: 171 IVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVS 207
Score = 41 (19.5 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDV 300
G S I+ W DG+ + D + ++ V
Sbjct: 288 GSSPQCISLAWSQDGQTLFAGYTDNIIRVYQV 319
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 128 (50.1 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 154 IRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
+RS +GH V DV + GQ L S S D+T+RLW G Q+ H+ V SV F
Sbjct: 62 VRSLTGHNHFVSDVVISSDGQFAL-SGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFS 120
Query: 213 PNKDLVLSASGDKSVHIWQAV 233
+ ++S S DKS+ +W +
Sbjct: 121 ADNRQIVSGSRDKSIKLWNTL 141
Score = 53 (23.7 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 268 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
+GH+ V DG + D A L+D+ G L +L G+D
Sbjct: 195 IGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGND 240
Score = 43 (20.2 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 8/37 (21%), Positives = 20/37 (54%)
Query: 286 VITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
+++A WD+V ++++ + + GH + + VS
Sbjct: 171 IVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVS 207
Score = 41 (19.5 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDV 300
G S I+ W DG+ + D + ++ V
Sbjct: 288 GSSPQCISLAWSQDGQTLFAGYTDNIIRVYQV 319
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 131 (51.2 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 32/90 (35%), Positives = 46/90 (51%)
Query: 145 KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQ-TGKCV---LQYS 200
K +LL C SGHR VW P PVL + D+T+R+W+ TG+ V +
Sbjct: 3 KLTLLQC-----LSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKTVLSD 57
Query: 201 GHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
GH+ ++ V + P + SAS D +V IW
Sbjct: 58 GHTRTIRDVAWSPCGRFLASASFDATVAIW 87
Score = 121 (47.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 31/84 (36%), Positives = 42/84 (50%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPNKD 216
GH + DVA P L SAS D TV +W ++G+ C GH V SV + +
Sbjct: 58 GHTRTIRDVAWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGA 117
Query: 217 LVLSASGDKSVHIWQAVIN--WEC 238
L+ + S DKSV IW+ +EC
Sbjct: 118 LLATCSRDKSVWIWEVAQEDEYEC 141
Score = 50 (22.7 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDV 300
L GH N V + W G + T S D+ +++V
Sbjct: 100 LEGHENEVKSVSWSKSGALLATCSRDKSVWIWEV 133
Score = 43 (20.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 270 HSNVVIAADWLSDGEQVITASWDRVANLF--DVETG--TILQSLTGHDEEPHILCVSSYY 325
HS V +W + + + +AS+D L+ D+ + +L HD + +
Sbjct: 148 HSQDVKKVEWHPNEDVLASASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIAFDASG 207
Query: 326 SKV-SCDLFQRIQ 337
S++ SC Q ++
Sbjct: 208 SRLASCSDDQTVR 220
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 143 (55.4 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 47/174 (27%), Positives = 68/174 (39%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R F GHRD V V L S S D T+ +W + +++GH +V V F P+
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 215 KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKE--PDESSITLRTPVK------- 265
L+ S S DK+V IW + E S D S+ + K
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 266 -------ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
L H N V A + DG +++AS D+ L+D + + S H
Sbjct: 133 HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEH 186
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 46/159 (28%), Positives = 70/159 (44%)
Query: 172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231
GQ ++ +AS D+TV++WST + + + H V +F P+ L++SAS DK+V +W
Sbjct: 115 GQSLV-TASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 232 AV----INWECXXXXXXXXXXESKEPDESSIT---LRTPVK-------ELLGH----SNV 273
I+ C P + I + VK LL H S
Sbjct: 174 KTSRECIHSYCEHGGFVTYV--DFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAA 231
Query: 274 VIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
V A + G +ITAS D + D+ G +L +L GH
Sbjct: 232 VNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGH 270
Score = 114 (45.2 bits), Expect = 0.00086, P = 0.00085
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
S + H + V P ++ SAS D+TV+LW + +C+ Y H G V V F P+
Sbjct: 140 SLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSG 199
Query: 216 DLVLSASGDKSVHIWQA 232
+ +A D +V +W A
Sbjct: 200 TCIAAAGMDNTVKVWDA 216
Score = 114 (45.2 bits), Expect = 0.00086, P = 0.00085
Identities = 30/106 (28%), Positives = 51/106 (48%)
Query: 126 KLKTTNKLKVQTS--KIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADR 183
K +L V S K V + + C I S+ H V V P + +A D
Sbjct: 152 KFSPDGRLIVSASDDKTVKLWDKTSREC--IHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 184 TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229
TV++W +T + + Y HS +VN++ F P+ + +++AS D ++ I
Sbjct: 210 TVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKI 255
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/176 (25%), Positives = 82/176 (46%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I++F GH +GV + ++ +L + S D T+++W T+TG+ + GH + ++F
Sbjct: 342 IKTFKGHTNGV--MCLQFEDNILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQFDD 399
Query: 214 NKDLVLSASGDKSVHIWQAVINW---ECXXXXXXXXXXESKEPDESSI----TLRTPVK- 265
K ++S S D+++ +W NW EC ++SI ++ VK
Sbjct: 400 TK--LISGSMDRTIKVW----NWRTGECISTYTGHRGGVIGLHFDASILASGSVDKTVKI 453
Query: 266 ---------ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
L GH++ V A + V +AS D L+D++T T +++ GH
Sbjct: 454 WNFEDKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGH 509
Score = 133 (51.9 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
++R+ GH G+ ++ L S S DRT+++W+ +TG+C+ Y+GH G V + F
Sbjct: 381 ELRTLRGHESGIR--CLQFDDTKLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHF- 437
Query: 213 PNKDLVLSASGDKSVHIW 230
+ ++ S S DK+V IW
Sbjct: 438 -DASILASGSVDKTVKIW 454
Score = 57 (25.1 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCV 321
++ GH V A +D ++++ + DR+ ++D TG ++ TGH P + C+
Sbjct: 602 LRTFFGHLEGVWALG--ADTLRIVSGAEDRMIKIWDPRTGKCERTFTGHSG-P-VTCI 655
Score = 47 (21.6 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 286 VITASWDRVANLFDVETGTILQSLTGHDE 314
++T++ D L++ TG L++ GH E
Sbjct: 582 MVTSALDSTIRLWETTTGRCLRTFFGHLE 610
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 146 (56.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH V + P L SA+ D TV+LW GK + ++ GH+G VN V F PN+
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY 202
Query: 217 LVLSASGDKSVHIW 230
L+ S S D+++ W
Sbjct: 203 LLASGSSDRTIRFW 216
Score = 137 (53.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 126 KLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRT 184
+L T +L V S+ S + L KI R+ GH+ + + P + S S D
Sbjct: 70 RLNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 185 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
++LW + CV +Y GHS +V +RF P+ + SA+ D +V +W
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 146 (56.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH V + P L SA+ D TV+LW GK + ++ GH+G VN V F PN+
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY 202
Query: 217 LVLSASGDKSVHIW 230
L+ S S D+++ W
Sbjct: 203 LLASGSSDRTIRFW 216
Score = 137 (53.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 126 KLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRT 184
+L T +L V S+ S + L KI R+ GH+ + + P + S S D
Sbjct: 70 RLNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 185 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
++LW + CV +Y GHS +V +RF P+ + SA+ D +V +W
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 146 (56.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH V + P L SA+ D TV+LW GK + ++ GH+G VN V F PN+
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY 202
Query: 217 LVLSASGDKSVHIW 230
L+ S S D+++ W
Sbjct: 203 LLASGSSDRTIRFW 216
Score = 137 (53.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 126 KLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRT 184
+L T +L V S+ S + L KI R+ GH+ + + P + S S D
Sbjct: 70 RLNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 185 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
++LW + CV +Y GHS +V +RF P+ + SA+ D +V +W
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 146 (56.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH V + P L SA+ D TV+LW GK + ++ GH+G VN V F PN+
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY 202
Query: 217 LVLSASGDKSVHIW 230
L+ S S D+++ W
Sbjct: 203 LLASGSSDRTIRFW 216
Score = 137 (53.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 126 KLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRT 184
+L T +L V S+ S + L KI R+ GH+ + + P + S S D
Sbjct: 70 RLNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 185 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
++LW + CV +Y GHS +V +RF P+ + SA+ D +V +W
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 146 (56.5 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH V + P L SA+ D TV+LW GK + ++ GH+G VN V F PN+
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY 202
Query: 217 LVLSASGDKSVHIW 230
L+ S S D+++ W
Sbjct: 203 LLASGSSDRTIRFW 216
Score = 137 (53.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 126 KLKTTNKLKVQTSKIVSSFKTSLLSCYKI-RSFSGHRDGVWDVAVRPGQPVLGSASADRT 184
+L T +L V S+ S + L KI R+ GH+ + + P + S S D
Sbjct: 70 RLNTPEELIVAGSQS-GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTN 128
Query: 185 VRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
++LW + CV +Y GHS +V +RF P+ + SA+ D +V +W
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 127 (49.8 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 28/77 (36%), Positives = 38/77 (49%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+++F GH D + VA P LG+ S D+T RLW TG +L GHS SV + F
Sbjct: 332 LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQ 391
Query: 214 NKDLVLSASGDKSVHIW 230
+ L S D +W
Sbjct: 392 DGALAASCGLDSLARVW 408
Score = 111 (44.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 23/72 (31%), Positives = 33/72 (45%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
GH V+ +A + + S D R+W +TG+ +L + GH V SV F PN +
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHL 438
Query: 219 LSASGDKSVHIW 230
S D IW
Sbjct: 439 ASGGEDNQCRIW 450
Score = 108 (43.1 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 24/71 (33%), Positives = 36/71 (50%)
Query: 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 219
H++ DV P L +ASADRT +LW T G + + GH + V F P+ +
Sbjct: 297 HKERATDVVFSPVDDCLATASADRTAKLWKTD-GTLLQTFEGHLDRLARVAFHPSGKYLG 355
Query: 220 SASGDKSVHIW 230
+ S DK+ +W
Sbjct: 356 TTSYDKTWRLW 366
Score = 61 (26.5 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 20/78 (25%), Positives = 40/78 (51%)
Query: 258 ITLRTPVKELLGHSNVVIAADWL-SDGEQVITASWDRVANLFDVETGTILQSLTGHDEEP 316
+ +R + + H+N+V + +G + TAS+D N++ ++++SL GH+ +
Sbjct: 452 LRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKV 511
Query: 317 HILCV---SSYYSKVSCD 331
L + SS + VS D
Sbjct: 512 ASLDITADSSCIATVSHD 529
Score = 60 (26.2 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
GHS V + DG + D +A ++D+ TG + GH
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGH 422
Score = 58 (25.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLF 298
VK L GH + V + D +D + T S DR L+
Sbjct: 501 VKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 142 (55.0 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 43/167 (25%), Positives = 77/167 (46%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
GH V V+V P + + ++S+D T+++WS T + GH ++ V++ +
Sbjct: 52 GHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYL 111
Query: 219 LSASGDKSVHIW--QAVINWECXXXXXXXXXXESKEP----------DES----SITLRT 262
SAS DK++ IW + + C P DE+ ++ T
Sbjct: 112 ASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGT 171
Query: 263 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSL 309
++ L HS +I+ +DG TAS+D +A ++DV +G L++L
Sbjct: 172 CLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTL 218
Score = 131 (51.2 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 40/138 (28%), Positives = 64/138 (46%)
Query: 201 GHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV-INWECXXXXXXXXXXESK-------- 251
GH SV V PNK + ++S D ++ IW A+ EC + K
Sbjct: 52 GHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYL 111
Query: 252 --EPDESSITL-----RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGT 304
D+ +I + R V+ L GH+N V + D+ G +++ SWD +++++ GT
Sbjct: 112 ASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGT 171
Query: 305 ILQSLTGHDEEPHILCVS 322
L+ L H E P I+ VS
Sbjct: 172 CLRMLPAHSE-P-IISVS 187
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 131 NKLKVQTSKIVSSFKTSLLSCYKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWS 189
NK + TS + K +++ + GH G+ V G L SAS D+T+R+W
Sbjct: 65 NKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWD 124
Query: 190 TQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
+ V GH+ V+S+ F P L++S S D++V IW
Sbjct: 125 FEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIW 165
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 28/85 (32%), Positives = 41/85 (48%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R GH + V + P +L S S D TVR+W+ Q G C+ HS + SV
Sbjct: 131 VRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISA 190
Query: 214 NKDLVLSASGDKSVHIWQAVINWEC 238
+ L +AS D IW V++ +C
Sbjct: 191 DGTLCATASYDGMARIWD-VLSGQC 214
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 149 (57.5 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210
C + F+GH+ G+W V P +L ++SAD T++LW Q C+ + GH SV +
Sbjct: 522 CSLLGVFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKII 581
Query: 211 FLPNKDLVLSASGDKSVHIWQAVINWEC 238
F+ +LS D + +W N EC
Sbjct: 582 FVSRGTQLLSGGSDGLLKLWTIKTN-EC 608
Score = 41 (19.5 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 259 TLRTP--VKELLGHSNVVIAADWLSDGEQVITASWDRVANLF-DV 300
T++T VK L GH + + + V+TAS D L+ DV
Sbjct: 602 TIKTNECVKTLDGHEDKIWGLHTNKQDDMVVTASSDSSITLWKDV 646
>POMBASE|SPAC25H1.08c [details] [associations]
symbol:SPAC25H1.08c "ribosome biogenesis protein Sqt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC25H1.08c GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 HOGENOM:HOG000261676 GO:GO:0000027 HSSP:Q04724
KO:K14818 OrthoDB:EOG45TGWZ PIR:T38388 RefSeq:NP_593812.1
ProteinModelPortal:O13982 STRING:O13982 PRIDE:O13982
EnsemblFungi:SPAC25H1.08c.1 GeneID:2542715 KEGG:spo:SPAC25H1.08c
OMA:PICACAS NextBio:20803763 Uniprot:O13982
Length = 399
Score = 103 (41.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 27/132 (20%), Positives = 59/132 (44%)
Query: 113 NKQKVLASNPSAQKLKTTNKLKVQ------TSKIVSSFKTSLLSCYKIRSFSGHRDGVWD 166
N++ +A N + +K +KL Q + + +++ ++ F H+D V+
Sbjct: 7 NQELYIAENEVEEVIKDNDKLMDQGVTEDEAEQEQNDTMNNMVMDMSVQGFFEHKDSVFS 66
Query: 167 VAVRPGQPVL-GSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK 225
V++ P L S D +W TG+ + Q +GH S+ ++ + + + + D
Sbjct: 67 VSINPVHSNLCASGGGDDLGYIWDITTGEQICQLTGHKDSIVAIDWSFDGTYIATGGMDS 126
Query: 226 SVHIWQAVINWE 237
V +W++ +E
Sbjct: 127 QVRLWKSSTGFE 138
Score = 83 (34.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 265 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
++ L H VI +L + ++TA D V +DV +G +L TGH +EP ILC++
Sbjct: 320 RKSLPHEQAVIDCKFLPNTPYLLTACADCVIRKWDVRSGQLLGEYTGH-QEP-ILCMA 375
Score = 74 (31.1 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I +F + VW ++ P L + D ++ +WS +GK V GH+ VN+ +F+P
Sbjct: 140 ITAFETVDEIVW-LSWHPKGLFLAAGCNDGSIWMWSLPSGKVVQVMYGHTAPVNAGKFIP 198
Score = 54 (24.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 266 ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 301
E GH ++ DG++V+T S D +FD E
Sbjct: 363 EYTGHQEPILCMAITPDGKRVVTGSDDTELLVFDCE 398
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 141 (54.7 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 100 NDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSG 159
+D ECVT + + N+ K +A PS L T ++ K + + + C + +
Sbjct: 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK--SVWVWEVDEEDEYECVSV--LNS 148
Query: 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPNKDL 217
H V V P Q +L SAS D TV+L+ + C GH +V S+ F P+
Sbjct: 149 HTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQR 208
Query: 218 VLSASGDKSVHIWQ 231
+ S S D++V IW+
Sbjct: 209 LASCSDDRTVRIWR 222
Score = 120 (47.3 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 30/83 (36%), Positives = 41/83 (49%)
Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNS 208
C + S GH+ V VA P L SAS D T +W +CV GH V S
Sbjct: 52 CKSVLS-EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKS 110
Query: 209 VRFLPNKDLVLSASGDKSVHIWQ 231
V + P+ +L+ + S DKSV +W+
Sbjct: 111 VAWAPSGNLLATCSRDKSVWVWE 133
Score = 41 (19.5 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG--TILQSLTGHD 313
V L H+ V W E + +AS+D L+ E +L GH+
Sbjct: 143 VSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHE 194
Score = 37 (18.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 14/69 (20%), Positives = 30/69 (43%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCV---SS 323
L GH + V + + G+++ + S DR ++ Q + +P CV S
Sbjct: 190 LEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCVCTLSG 249
Query: 324 YYSKVSCDL 332
++++ D+
Sbjct: 250 FHTRTIYDV 258
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 144 (55.7 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 47/174 (27%), Positives = 67/174 (38%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R SGH V +AV PG + SADRT+++W +GK L +GH +V V
Sbjct: 200 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSAR 259
Query: 215 KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKE--P----------DESS----I 258
+ S DK V W N + P D ++ +
Sbjct: 260 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 319
Query: 259 TLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+ V L GH+N V + QV+T S D L+D+ G +LT H
Sbjct: 320 RTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNH 373
Score = 119 (46.9 bits), Expect = 0.00034, P = 0.00034
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR + GH V+ + + P VL + S D T R+W +T V SGH+ +V +V+
Sbjct: 283 IRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQA 342
Query: 214 NKDLVLSASGDKSVHIWQAV 233
+ V++ S D ++ +W V
Sbjct: 343 AEPQVVTGSHDTTIRLWDLV 362
>UNIPROTKB|F1RF38 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0031117 "positive regulation of microtubule depolymerization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0007026
"negative regulation of microtubule depolymerization" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0008352
"katanin complex" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
GO:GO:0008352 PANTHER:PTHR19845 OMA:NAISRTP GO:GO:0031117
EMBL:CU467555 Ensembl:ENSSSCT00000003113 Uniprot:F1RF38
Length = 521
Score = 144 (55.7 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
GH V + P L SA+ D TV+LW GK + ++ GH+G VN V F PN+ L+
Sbjct: 2 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 61
Query: 219 LSASGDKSVHIW 230
S S D+++ W
Sbjct: 62 ASGSSDRTIRFW 73
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 141 (54.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 31/83 (37%), Positives = 47/83 (56%)
Query: 151 CYKIRSFSGHRDGVWDVAVR----PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSV 206
C K+ F GH+ +R PG + S SADR V +W T + + + GH+GSV
Sbjct: 262 CVKV--FQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSV 319
Query: 207 NSVRFLPNKDLVLSASGDKSVHI 229
N+V F P + L+LS S DK++++
Sbjct: 320 NAVDFSPKEPLILSGSSDKTLYL 342
Score = 120 (47.3 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210
C + + SGH V + P + + S D+T+ W TG+ ++ GH VNSV+
Sbjct: 88 CENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQ 147
Query: 211 -FLPNKDLVLSASGDKSVHIWQA 232
+ L+ S S D+++ IW A
Sbjct: 148 GSRRGQQLLCSGSDDRTIKIWDA 170
Score = 109 (43.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 34/125 (27%), Positives = 53/125 (42%)
Query: 110 KNFNKQKVLASNPSAQK---LKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWD 166
K N +LA K + TN+ K V +TS L I GH ++
Sbjct: 4 KRPNNSVILAQEAKRSKNDLMAYTNRDKALLESGVR--RTSNLQA-PIMQLEGHEGEIFT 60
Query: 167 VAVRPGQPVLGSASADRTVRLWST-QTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDK 225
P +L S+ DR + +W + + V+ SGHSG+V F P+ + + S DK
Sbjct: 61 AEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDK 120
Query: 226 SVHIW 230
++ W
Sbjct: 121 TLAFW 125
Score = 62 (26.9 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 264 VKELLGHSNV----VIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
VK GH + ++ W +++ + S DR ++DV T IL L GH+
Sbjct: 263 VKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHN 316
Score = 40 (19.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 10/44 (22%), Positives = 22/44 (50%)
Query: 258 ITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 301
+ R + +L GH+ V A D+ +++ S D+ L +++
Sbjct: 303 VNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEID 346
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 120 (47.3 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 36/104 (34%), Positives = 51/104 (49%)
Query: 149 LSCYKIRSFSGHRDGVWDVAVRP------G-QPVLGSASADRTVRLWSTQ------TGKC 195
L +I+ GH D VW VA P G P+L S S D TVR+W T K
Sbjct: 8 LELVEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKT 67
Query: 196 VLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV-INWEC 238
VL+ + H+ +V S + P+ L+ +AS D + IW+ +EC
Sbjct: 68 VLEET-HTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFEC 110
Score = 108 (43.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 33/131 (25%), Positives = 59/131 (45%)
Query: 104 CVTNMNKNFNKQ-KVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 162
C T + + + + A +PS Q L T + T+ I ++ + C I + GH +
Sbjct: 65 CKTVLEETHTRTVRSCAWSPSGQLLATASF--DGTTGIWKNYGSEF-EC--ISTLEGHEN 119
Query: 163 GVWDVAVRPGQPVLGSASADRTVRLWSTQTGK---CVLQYSGHSGSVNSVRFLPNKDLVL 219
V V+ L + S D++V +W G C +GH+ V V++ P D++
Sbjct: 120 EVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLF 179
Query: 220 SASGDKSVHIW 230
S S D ++ +W
Sbjct: 180 SCSYDNTIKVW 190
Score = 62 (26.9 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQS---LTGHDEE 315
+ L GH N V + W + G + T S D+ +++V G LTGH ++
Sbjct: 111 ISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQD 165
Score = 58 (25.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 21/83 (25%), Positives = 40/83 (48%)
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHI-LC-VSSYYS 326
GHS+ V + + + G++++T S D ++ + +QS G + P I LC +S Y+
Sbjct: 211 GHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAK-MQS--GEEYAPWIHLCTLSGYHD 267
Query: 327 KVSCDL-FQRIQHLDCGTSENPI 348
+ + R + G +N I
Sbjct: 268 RTIYSAHWSRDDIIASGAGDNAI 290
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 146 (56.5 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GH V P + + SADRTVRLW G CV ++GH G ++S+ F P
Sbjct: 600 LRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSP 659
Query: 214 NKDLVLSASGDKSVHIW 230
N + + + D V +W
Sbjct: 660 NGRFLATGATDGRVLLW 676
Score = 139 (54.0 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 42/160 (26%), Positives = 66/160 (41%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH VWD P S DR RLW+T + + ++GH V RF PN +
Sbjct: 561 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN 620
Query: 217 LVLSASGDKSVHIWQAVINWECXXXXXXXXX---XESKEPD---------ESSITL---- 260
+ + S D++V +W V+N C + P+ + + L
Sbjct: 621 YIATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIG 679
Query: 261 -RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
V EL GH++ + A + DGE + + S D L+D
Sbjct: 680 HGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWD 719
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GH+ + +A P L + + D V LW G V + GH+ ++ ++RF
Sbjct: 642 VRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSR 701
Query: 214 NKDLVLSASGDKSVHIWQAVINWE 237
+ +++ S S D +V +W AV +E
Sbjct: 702 DGEILASGSMDNTVRLWDAVKAFE 725
Score = 120 (47.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
+++ GH V+ + P + L S S D TVRLWS QT C++ Y GH+ V +F
Sbjct: 515 ELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 574
Query: 213 PNKDLVLSASGDKSVHIW 230
P +S D+ +W
Sbjct: 575 PYGYYFVSGGHDRVARLW 592
Score = 50 (22.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHIL 319
V+ GH + + + +G + T + D L+D+ G ++ L GH + + L
Sbjct: 642 VRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYAL 697
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 120 (47.3 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 29/80 (36%), Positives = 42/80 (52%)
Query: 155 RSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
R+ GH V DV + GQ L S S D T+RLW TG ++ GH+ V SV F
Sbjct: 16 RALRGHSHFVSDVVISSDGQFAL-SGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS 74
Query: 214 NKDLVLSASGDKSVHIWQAV 233
+ ++S S DK++ +W +
Sbjct: 75 DNRQIVSGSRDKTIKLWNTL 94
Score = 47 (21.6 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 268 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
+GH+ + DG + D A L+D+ G L +L G D
Sbjct: 148 IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD 193
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 98 (39.6 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 269 GHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
GH N+V W +G V+TAS D++ L+D+ + L+S GH+++
Sbjct: 131 GHKNIVQCVKWNQNGNWVLTASKDQIIKLYDIRSMKELESFRGHNKD 177
Score = 91 (37.1 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 217
+ HR+ V D++ S S D TV++W + +GH V SV + P K L
Sbjct: 46 TAHRESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSL 105
Query: 218 VLSASGDKSVHIWQA 232
++S D V +W A
Sbjct: 106 LVSGGKDYLVKLWDA 120
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 143 (55.4 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 45/174 (25%), Positives = 67/174 (38%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R SGH V +AV PG + + DR +++W +GK L +GH +V V
Sbjct: 166 RVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTK 225
Query: 215 KDLVLSASGDKSVHIWQAVIN-------------WECXXXXXXXXXXESKEPDESSI-TL 260
+ S D+ V W N + S + I +
Sbjct: 226 HPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDM 285
Query: 261 RTP--VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
RT V L GH+N V + + Q+IT S D L+D+ G + +LT H
Sbjct: 286 RTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNH 339
Score = 118 (46.6 bits), Expect = 0.00040, P = 0.00040
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR + GH V+ +A+ P VL ++ D T R+W +T V +GH+ +V SV
Sbjct: 249 IRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQA 308
Query: 214 NKDLVLSASGDKSVHIW 230
+++ S D +V +W
Sbjct: 309 TNPQIITGSHDSTVRLW 325
Score = 118 (46.6 bits), Expect = 0.00040, P = 0.00040
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 149 LSCYKIR-SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 207
L+ K++ S +GH V VAV P L S DR V+ W + K + Y GH +V
Sbjct: 201 LASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVY 260
Query: 208 SVRFLPNKDLVLSASGDKSVHIW 230
S+ P D++ ++ D + IW
Sbjct: 261 SLALHPTIDVLATSGRDSTARIW 283
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 144 (55.7 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 50/182 (27%), Positives = 70/182 (38%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R SGH V +AV PG + SADRT+++W +GK L +GH +V V
Sbjct: 202 RVISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNR 261
Query: 215 KDLVLSASGDKSVHIWQAVIN-------------WECXXXXXXXXXXE-SKEPDESSITL 260
+ S DK V W N ++ S++ +
Sbjct: 262 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDI 321
Query: 261 RTP--VKELLGHSNVVIAADWLSDGEQVITA-SWDRVANLFDVETGTILQSLTGHDEEPH 317
RT V L GH+N V S QV+T S D L+D+ G +LT H +
Sbjct: 322 RTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNHKKSVR 381
Query: 318 IL 319
L
Sbjct: 382 AL 383
Score = 40 (19.1 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 303 GTILQSLTGHDEEPHILCVSS 323
G +Q+L+GH+ + L V+S
Sbjct: 408 GNFIQNLSGHNAIINTLAVNS 428
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 140 (54.3 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 61/233 (26%), Positives = 94/233 (40%)
Query: 100 NDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSG 159
+D ECVT + + N+ K +A PS L T ++ K + + + C + +
Sbjct: 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK--SVWVWEVDEEDEYECVSV--LNS 148
Query: 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPNKDL 217
H V V P Q +L SAS D TV+L+ + C GH +V S+ F P+
Sbjct: 149 HTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQR 208
Query: 218 VLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLG-HSNVVIA 276
+ S S D++V IW+ + E S V L G HS +
Sbjct: 209 LASCSDDRTVRIWRQYLPGN-----------EQGVACSGSEASWKCVCTLSGFHSRTIYD 257
Query: 277 ADWLSDGEQVITASWDRVANLFDVETGTILQ----SLTGHDEEPH---ILCVS 322
W + TA D +F+ + G+ Q SLT H + H + CV+
Sbjct: 258 VAWCQLTGTLATACGDDAIRVFEEDPGSDPQQPTFSLTAHVPQAHSQDVNCVA 310
Score = 117 (46.2 bits), Expect = 0.00029, P = 0.00029
Identities = 28/75 (37%), Positives = 38/75 (50%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNSVRFLPNKD 216
GH+ V VA P L SAS D T +W +CV GH V SV + P+ +
Sbjct: 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGN 118
Query: 217 LVLSASGDKSVHIWQ 231
L+ + S DKSV +W+
Sbjct: 119 LLATCSRDKSVWVWE 133
Score = 113 (44.8 bits), Expect = 0.00081, P = 0.00081
Identities = 39/150 (26%), Positives = 66/150 (44%)
Query: 98 ECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSF 157
E ++ ECV+ +N + K + +PS + L + + T K+ + + C +
Sbjct: 136 EEDEYECVSVLNSHTQDVKHVVWHPSQELLASASY--DDTVKLYREEEDDWVCC---ATL 190
Query: 158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLW---------------STQTGKCVLQYSG- 201
GH VW +A P L S S DRTVR+W S + KCV SG
Sbjct: 191 EGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSEASWKCVCTLSGF 250
Query: 202 HSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231
HS ++ V + + +A GD ++ +++
Sbjct: 251 HSRTIYDVAWCQLTGTLATACGDDAIRVFE 280
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 128 (50.1 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 28/82 (34%), Positives = 41/82 (50%)
Query: 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 211
Y RS GH V D + SAS D+T+RLW TG ++ GH+ V SV F
Sbjct: 54 YPKRSLKGHSHIVSDCVISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSF 113
Query: 212 LPNKDLVLSASGDKSVHIWQAV 233
+ ++S S D+S+ +W +
Sbjct: 114 SADNRQIVSGSRDRSIKLWNTL 135
Score = 123 (48.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 29/81 (35%), Positives = 44/81 (54%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNSVRFL 212
R F GH + V V+ + S S DR+++LW+T G C + GHS V+ VRF
Sbjct: 99 RRFVGHTNDVLSVSFSADNRQIVSGSRDRSIKLWNT-LGDCKYTITEKGHSEWVSCVRFS 157
Query: 213 PNKD--LVLSASGDKSVHIWQ 231
PN +++S+ DK V +W+
Sbjct: 158 PNPQNPVIVSSGWDKLVKVWE 178
Score = 50 (22.7 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 19/67 (28%), Positives = 28/67 (41%)
Query: 256 SSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
SS L+T + +GH+ + DG + D L+D+ L SL +DE
Sbjct: 180 SSCKLQT---DHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNANDEI 236
Query: 316 PHILCVS 322
H L S
Sbjct: 237 -HALVFS 242
Score = 42 (19.8 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 8/46 (17%), Positives = 23/46 (50%)
Query: 269 GHSNVVIAADWLSDGEQ--VITASWDRVANLFDVETGTILQSLTGH 312
GHS V + + + ++++ WD++ ++++ + + GH
Sbjct: 146 GHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIGH 191
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 144 (55.7 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I + H V + P L SA+ D TV+LW GK + +++GHSG VN V F P
Sbjct: 140 IFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHP 199
Query: 214 NKDLVLSASGDKSVHIW 230
++ L+ S S D+++ W
Sbjct: 200 SEYLLASGSSDRTIRFW 216
Score = 121 (47.7 bits), Expect = 0.00029, P = 0.00029
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R+ GH+ + + P + S S D ++LW + C+ +Y H+ +V +RF P
Sbjct: 98 LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSP 157
Query: 214 NKDLVLSASGDKSVHIW 230
+ + SA+ D +V +W
Sbjct: 158 DGKWLASAADDHTVKLW 174
>TAIR|locus:2061997 [details] [associations]
symbol:AT2G47410 "AT2G47410" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0009630 "gravitropism"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
EMBL:CP002685 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0080008
KO:K11797 IPI:IPI00537086 RefSeq:NP_850474.3 UniGene:At.36365
ProteinModelPortal:F4IL43 PRIDE:F4IL43 EnsemblPlants:AT2G47410.1
GeneID:819354 KEGG:ath:AT2G47410 OMA:CDSSMIP Uniprot:F4IL43
Length = 1520
Score = 131 (51.2 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 146 TSLLSCYKIRSFSGHRDGVW-DVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSG 204
T + I+ GHR+ V+ + R G+ V+ + S DR V++WS +T C+ GH G
Sbjct: 221 TMVQKMQNIKKLRGHRNAVYCAIFDRSGRYVI-TGSDDRLVKIWSMETALCLASCRGHEG 279
Query: 205 SVNSVRFLPNKDLVLSASGDKSVHIWQ 231
+ + N LV SAS D + +W+
Sbjct: 280 DITDLAVSSNNALVASASNDFVIRVWR 306
Score = 122 (48.0 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 31/93 (33%), Positives = 48/93 (51%)
Query: 143 SFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGH 202
S +T+L C + S GH + D+AV ++ SAS D +R+W G + GH
Sbjct: 264 SMETAL--C--LASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGH 319
Query: 203 SGSVNSVRFLPNKDLV---LSASGDKSVHIWQA 232
+G+V ++ F P + V LS+S D + IW A
Sbjct: 320 TGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDA 352
Score = 65 (27.9 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 272 NVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYSKVS 329
N++I W D V+ A D +++ G+++ LTGH E ++L V + +++
Sbjct: 532 NMII---WSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIA 586
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 138 (53.6 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 47/175 (26%), Positives = 72/175 (41%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I+++ H V DV V S DR V W TG+ + ++ GH G VN+V+F
Sbjct: 53 IKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFND 112
Query: 214 NKDLVLSASGDKSVHIW-------QAVINWECXXXXXXXXXXESKEPDESSI--TLRT-- 262
+ +V+SA D+S+ +W + V + E S+ T+RT
Sbjct: 113 SSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFD 172
Query: 263 -----PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+ + LG I+ +DG V+ D L D TG +LQ GH
Sbjct: 173 MRIGREMSDNLGQPVNCISIS--NDGNCVLAGCLDSTLRLLDRTTGELLQVYKGH 225
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 139 (54.0 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 100 NDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSG 159
+D ECVT + + N+ K +A PS L T ++ K + + + C + +
Sbjct: 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK--SVWVWEVDEEDEYECVSV--LNS 148
Query: 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--CVLQYSGHSGSVNSVRFLPNKDL 217
H V V P Q +L SAS D TV+L+ + C GH +V S+ F P+
Sbjct: 149 HTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQR 208
Query: 218 VLSASGDKSVHIWQ 231
+ S S D++V IW+
Sbjct: 209 LASCSDDRTVRIWR 222
Score = 120 (47.3 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 30/83 (36%), Positives = 41/83 (49%)
Query: 151 CYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG--KCVLQYSGHSGSVNS 208
C + S GH+ V VA P L SAS D T +W +CV GH V S
Sbjct: 52 CKSVLS-EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKS 110
Query: 209 VRFLPNKDLVLSASGDKSVHIWQ 231
V + P+ +L+ + S DKSV +W+
Sbjct: 111 VAWAPSGNLLATCSRDKSVWVWE 133
Score = 114 (45.2 bits), Expect = 0.00063, P = 0.00063
Identities = 38/150 (25%), Positives = 66/150 (44%)
Query: 98 ECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSF 157
E ++ ECV+ +N + K + +PS + L + + T K+ + + C +
Sbjct: 136 EEDEYECVSVLNSHTQDVKHVVWHPSQELLASASY--DDTVKLYREEEDDWVCC---ATL 190
Query: 158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLW---------------STQTGKCVLQYSG- 201
GH VW +A P L S S DRTVR+W S + KC+ SG
Sbjct: 191 EGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGF 250
Query: 202 HSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231
HS ++ + + + +A GD ++ ++Q
Sbjct: 251 HSRTIYDIAWCQLTGALATACGDDAIRVFQ 280
Score = 40 (19.1 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETG--TILQSLTGHD 313
V L H+ V W E + +AS+D L+ E +L GH+
Sbjct: 143 VSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHE 194
Score = 40 (19.1 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 14/69 (20%), Positives = 30/69 (43%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCV---SS 323
L GH + V + + G+++ + S DR ++ Q + +P C+ S
Sbjct: 190 LEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSG 249
Query: 324 YYSKVSCDL 332
++S+ D+
Sbjct: 250 FHSRTIYDI 258
>UNIPROTKB|Q9NSS8 [details] [associations]
symbol:DKFZp434D199 "Putative uncharacterized protein
DKFZp434D199" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CH471059
EMBL:AL451070 EMBL:AC114495 UniGene:Hs.33962 HGNC:HGNC:30857
ChiTaRS:SNRNP40 EMBL:AL157420 IPI:IPI00385642 PIR:T46935 SMR:Q9NSS8
STRING:Q9NSS8 Ensembl:ENST00000373720 Uniprot:Q9NSS8
Length = 127
Score = 119 (46.9 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 171 PGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHI 229
P + + SADR V +W T + + + + GH+GS+N V F P++ +++SAS DK +++
Sbjct: 65 PDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYM 123
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 125 (49.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 30/85 (35%), Positives = 43/85 (50%)
Query: 158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGK--C-VLQYSGHSGSVNSVRFLPN 214
+GH D VW VA P VL S D+T+R+W + K C + GH ++ S+ + P
Sbjct: 2 TGHEDRVWSVAWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSPC 61
Query: 215 KDLVLSASGDKSVHIW-QAVINWEC 238
+ SAS D + IW Q +EC
Sbjct: 62 GTFLASASFDATTCIWDQKSGEFEC 86
Score = 53 (23.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVE 301
L GH N V + DW G + T D+ +++V+
Sbjct: 90 LEGHENEVKSVDWSVSGSLLATCGRDKSVWIWEVQ 124
Score = 41 (19.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 7/32 (21%), Positives = 18/32 (56%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLF 298
L GH + V + + G+++++ S D+ ++
Sbjct: 179 LEGHESTVWSISFDGSGDRIVSCSDDKTVRIW 210
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 44/160 (27%), Positives = 67/160 (41%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH VWD P S DR RLW+T + + ++GH VN RF PN +
Sbjct: 579 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 638
Query: 217 LVLSASGDKSVHIWQAVINWECXXXXXXXXX---XESKEPD---------ESSITL---- 260
V + S D++V +W V+N C + P+ + + L
Sbjct: 639 YVATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 697
Query: 261 -RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
V EL GH++ V + + DGE + + S D L+D
Sbjct: 698 HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GH V P + + SADRTVRLW G CV ++GH G ++S+ F P
Sbjct: 618 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 677
Query: 214 NKDLVLSASGDKSVHIW 230
N + + + D V +W
Sbjct: 678 NGRFLATGATDGRVLLW 694
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GH+ + + P L + + D V LW G V + GH+ +V S+RF
Sbjct: 660 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 719
Query: 214 NKDLVLSASGDKSVHIWQAVINWE-CXXXXXXXXXXESKEPDESS-------ITLRTPVK 265
+ +++ S S D +V +W A+ +E P+ S +T TPV
Sbjct: 720 DGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVV 779
Query: 266 EL-LGHSNVVIAA 277
L N+V+AA
Sbjct: 780 HLHFTRRNLVLAA 792
Score = 121 (47.7 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
+++ GH V+ + P + L S+S D TVRLWS QT C++ Y GH+ V +F
Sbjct: 533 ELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 592
Query: 213 PNKDLVLSASGDKSVHIW 230
P +S D+ +W
Sbjct: 593 PYGYYFVSGGHDRVARLW 610
Score = 50 (22.7 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
V+ GH + + + +G + T + D L+D+ G ++ L GH +
Sbjct: 660 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 710
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 44/160 (27%), Positives = 67/160 (41%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH VWD P S DR RLW+T + + ++GH VN RF PN +
Sbjct: 581 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640
Query: 217 LVLSASGDKSVHIWQAVINWECXXXXXXXXX---XESKEPD---------ESSITL---- 260
V + S D++V +W V+N C + P+ + + L
Sbjct: 641 YVATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 699
Query: 261 -RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
V EL GH++ V + + DGE + + S D L+D
Sbjct: 700 HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GH V P + + SADRTVRLW G CV ++GH G ++S+ F P
Sbjct: 620 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 679
Query: 214 NKDLVLSASGDKSVHIW 230
N + + + D V +W
Sbjct: 680 NGRFLATGATDGRVLLW 696
Score = 123 (48.4 bits), Expect = 0.00023, P = 0.00023
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GH+ + + P L + + D V LW G V + GH+ +V S+RF
Sbjct: 662 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 721
Query: 214 NKDLVLSASGDKSVHIWQAVINWE-CXXXXXXXXXXESKEPDESS-------ITLRTPVK 265
+ +++ S S D +V +W A+ +E P+ S +T TPV
Sbjct: 722 DGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVV 781
Query: 266 EL-LGHSNVVIAA 277
L N+V+AA
Sbjct: 782 HLHFTRRNLVLAA 794
Score = 121 (47.7 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
+++ GH V+ + P + L S+S D TVRLWS QT C++ Y GH+ V +F
Sbjct: 535 ELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 594
Query: 213 PNKDLVLSASGDKSVHIW 230
P +S D+ +W
Sbjct: 595 PYGYYFVSGGHDRVARLW 612
Score = 50 (22.7 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
V+ GH + + + +G + T + D L+D+ G ++ L GH +
Sbjct: 662 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 712
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 44/160 (27%), Positives = 67/160 (41%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH VWD P S DR RLW+T + + ++GH VN RF PN +
Sbjct: 582 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 641
Query: 217 LVLSASGDKSVHIWQAVINWECXXXXXXXXX---XESKEPD---------ESSITL---- 260
V + S D++V +W V+N C + P+ + + L
Sbjct: 642 YVATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 700
Query: 261 -RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
V EL GH++ V + + DGE + + S D L+D
Sbjct: 701 HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GH V P + + SADRTVRLW G CV ++GH G ++S+ F P
Sbjct: 621 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 680
Query: 214 NKDLVLSASGDKSVHIW 230
N + + + D V +W
Sbjct: 681 NGRFLATGATDGRVLLW 697
Score = 124 (48.7 bits), Expect = 0.00017, P = 0.00017
Identities = 37/133 (27%), Positives = 59/133 (44%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GH+ + + P L + + D V LW G V + GH+ +V S+RF
Sbjct: 663 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 722
Query: 214 NKDLVLSASGDKSVHIWQAVINWE-CXXXXXXXXXXESKEPDESS-------ITLRTPVK 265
+ +++ S S D +V +W AV +E P+ S +T TPV
Sbjct: 723 DGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVV 782
Query: 266 EL-LGHSNVVIAA 277
L N+V+AA
Sbjct: 783 HLHFTRRNLVLAA 795
Score = 121 (47.7 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
+++ GH V+ + P + L S+S D TVRLWS QT C++ Y GH+ V +F
Sbjct: 536 ELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 595
Query: 213 PNKDLVLSASGDKSVHIW 230
P +S D+ +W
Sbjct: 596 PYGYYFVSGGHDRVARLW 613
Score = 50 (22.7 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
V+ GH + + + +G + T + D L+D+ G ++ L GH +
Sbjct: 663 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 713
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 51/187 (27%), Positives = 81/187 (43%)
Query: 137 TSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV 196
T ++ S+ + L CYK GH VWD P S S DRT R+WS + +
Sbjct: 441 TIRLWSTKLNANLVCYK-----GHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPL 495
Query: 197 LQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXE---SKEP 253
+GH V+ V++ PN + + + S DK+V +W V EC + P
Sbjct: 496 RIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWD-VQTGECVRIFIGHRSMVLSLAMSP 554
Query: 254 D---------ESSIT---LRTP--VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
D + +I L T + L+GH++ V + + +G + + S D L+D
Sbjct: 555 DGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWD 614
Query: 300 VETGTIL 306
V + T L
Sbjct: 615 VTSSTKL 621
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 42/172 (24%), Positives = 72/172 (41%)
Query: 159 GHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 217
GH V+ P G VL S+SAD T+RLWST+ ++ Y GH+ V +F P
Sbjct: 416 GHSGPVYSATFSPPGDFVL-SSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHY 474
Query: 218 VLSASGDKSVHIWQA------------VINWECXXXXXXXXXXESKEPDES----SITLR 261
S S D++ IW + + +C + D++ +
Sbjct: 475 FASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTG 534
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHD 313
V+ +GH ++V++ DG + + D ++D+ T + L GH+
Sbjct: 535 ECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHN 586
>RGD|1307634 [details] [associations]
symbol:Chaf1b "chromatin assembly factor 1, subunit B (p60)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0031497 "chromatin
assembly" evidence=IEA;ISO] [GO:0033186 "CAF-1 complex"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:1307634 GO:GO:0005829 GO:GO:0005813
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 HOGENOM:HOG000183312 KO:K10751
OMA:VYDICWT CTD:8208 OrthoDB:EOG4G4GQD PRINTS:PR00319
HOVERGEN:HBG050780 EMBL:CH474083 EMBL:BC097460 IPI:IPI00370803
RefSeq:NP_001019912.1 UniGene:Rn.159953 STRING:Q4V8B4
Ensembl:ENSRNOT00000002299 GeneID:288242 KEGG:rno:288242
UCSC:RGD:1307634 InParanoid:Q4V8B4 NextBio:627840
Genevestigator:Q4V8B4 Uniprot:Q4V8B4
Length = 572
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 46/173 (26%), Positives = 76/173 (43%)
Query: 176 LGSASADRTVRLWSTQTG---KCVLQY----SGHSGSVNSVRFLPNKDLVLSASGDKSVH 228
L SA D VR+W + G K ++++ + H+ +VN VRF P + +L++ GD +V
Sbjct: 32 LASAGVDTAVRIWKVEKGPDGKAIVEFLSNLARHTKAVNVVRFSPTGE-ILASGGDDAV- 89
Query: 229 IWQAVINWECXXXXXXXXXXESKEPDESSITLR--TPVKELLGHSNVVIAADWLSDGEQV 286
++ W+ E DE+ + T VK L GH V W +DG +
Sbjct: 90 ----ILLWKMNDSKEPEQIAFQDE-DEAQLNKENWTVVKTLRGHLEDVYDICWATDGNMM 144
Query: 287 ITASWDRVANLFDVETGTILQSLTGHDEEPHILC---VSSYYSKVSCDLFQRI 336
+AS D ++DV G + H + + Y + +SCD R+
Sbjct: 145 ASASVDNTVIIWDVSKGQKISIFNEHKSYVQGVTWDPLGQYIATLSCDRVLRV 197
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 115 (45.5 bits), Expect = 0.00096, P = 0.00096
Identities = 38/137 (27%), Positives = 60/137 (43%)
Query: 95 KYPECNDMECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYK- 153
K PE +D + V K F K + +N +KL V S + + S K
Sbjct: 347 KVPE-SDADKVAMAKKRFEKAATI-NNKIVEKL-------VSASDDFTMYLWDPESSSKP 397
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+ GH+ V V P + SA D V+LW+ + GK + GH G+V F
Sbjct: 398 VARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSA 457
Query: 214 NKDLVLSASGDKSVHIW 230
+ L++S+S D ++ +W
Sbjct: 458 DSRLLVSSSKDTTLKVW 474
Score = 114 (45.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 156 SFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
S +GH + + + P + S S D T R+W TG + GH+ V +V + PN
Sbjct: 143 SIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPN 202
Query: 215 KDLVLSASGDKSVHIWQA 232
++ + S D +V IW A
Sbjct: 203 GAMIATGSMDNTVRIWDA 220
Score = 109 (43.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231
G P L SAS D TVR+W + + + SGH GSV VR+ + ++S D+++ +W
Sbjct: 251 GHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRW-GGTGKIYTSSHDRTIKVWN 309
Query: 232 A 232
+
Sbjct: 310 S 310
Score = 92 (37.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 23/87 (26%), Positives = 39/87 (44%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCV-LQYSGHSGSVNSVRFL 212
+ + GH V V+ P ++ + S D TVR+W + G+ + GH + S+ +
Sbjct: 184 LHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWE 243
Query: 213 P------NKDLVLSASGDKSVHIWQAV 233
P + SAS D +V IW +
Sbjct: 244 PYHLQQSGHPRLASASKDSTVRIWDVI 270
Score = 71 (30.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
+ L GH V + +D ++++S D +++V TG + + L GH +E
Sbjct: 440 ITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDE 491
>WB|WBGene00001680 [details] [associations]
symbol:gpb-2 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0030163 "protein catabolic
process" evidence=IMP] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IGI] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0040012 "regulation
of locomotion" evidence=IMP] [GO:0007631 "feeding behavior"
evidence=IMP] [GO:0007212 "dopamine receptor signaling pathway"
evidence=IMP] [GO:0032094 "response to food" evidence=IMP]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IGI;IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0040007 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007212
GO:GO:0007631 GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0040012 GO:GO:0046662
GO:GO:0043051 GO:GO:0032094 GO:GO:0007213 GO:GO:0030163
GO:GO:0008277 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 InterPro:IPR016346 PIRSF:PIRSF002394
EMBL:AF291847 EMBL:Z71263 PIR:T22478 RefSeq:NP_492072.1
UniGene:Cel.18555 ProteinModelPortal:Q20636 SMR:Q20636
STRING:Q20636 PaxDb:Q20636 EnsemblMetazoa:F52A8.2.1
EnsemblMetazoa:F52A8.2.2 GeneID:172483 KEGG:cel:CELE_F52A8.2
UCSC:F52A8.2 CTD:172483 WormBase:F52A8.2 InParanoid:Q20636
KO:K04539 OMA:ATDGLHE NextBio:875701 Uniprot:Q20636
Length = 356
Score = 121 (47.7 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 154 IRSFSGHRDGVWDVAVRP---GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVR 210
I++F GH V+ + V G + SA AD+ +W ++G+CV + GH +N+VR
Sbjct: 191 IQNFHGHTGDVFAIDVPKCDTGNTFI-SAGADKHSLVWDIRSGQCVQSFEGHEADINTVR 249
Query: 211 FLPNKDLVLSASGDKSVHIW 230
F PN D + S D + ++
Sbjct: 250 FHPNGDAFATGSDDATCRLF 269
Score = 52 (23.4 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWD 292
L GH N + DG V +ASWD
Sbjct: 324 LYGHENRISCLRTSPDGTAVCSASWD 349
Score = 40 (19.1 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 5 DTMSQKSTKHKRTASGKLSNLGDQDLSMLRTHLNSEYDD 43
D M K +R G + + D S+ + H+ S D
Sbjct: 51 DVMGALGVKQRRILKGHVGKVLCMDWSLDKRHIVSSSQD 89
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 113 (44.8 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 151 CYKIRSFSGHRDGVWDVA-VRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 209
C GH++ + D+ G ++ SAS D+TVR W +TGK + + + HS VNS
Sbjct: 86 CKNFMVLKGHKNAILDLHWTSDGSQIV-SASPDKTVRAWDVETGKQIKKMAEHSSFVNSC 144
Query: 210 RFLPNK---DLVLSASGDKSVHIW 230
P + L++S S D + +W
Sbjct: 145 --CPTRRGPPLIISGSDDGTAKLW 166
Score = 108 (43.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILC 320
L GH N ++ W SDG Q+++AS D+ +DVETG ++ + H + C
Sbjct: 92 LKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCC 145
Score = 105 (42.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 26/88 (29%), Positives = 41/88 (46%)
Query: 145 KTSLLSCYKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGH 202
+TS L I SGH V+ + P ++ S S DR + LW G C + GH
Sbjct: 38 RTSSLEA-PIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVH-GDCKNFMVLKGH 95
Query: 203 SGSVNSVRFLPNKDLVLSASGDKSVHIW 230
++ + + + ++SAS DK+V W
Sbjct: 96 KNAILDLHWTSDGSQIVSASPDKTVRAW 123
Score = 72 (30.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 20/83 (24%), Positives = 37/83 (44%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+ SG R W G +RT L + ++ SGH +V +++F P
Sbjct: 11 ALSGPRPMEWSTVPHSASQGPGPNGKNRTSSLEAP-----IMLLSGHPSAVYTMKFNPAG 65
Query: 216 DLVLSASGDKSVHIWQAVINWEC 238
L+ S S D+ + +W+ ++ +C
Sbjct: 66 TLIASGSHDREIFLWR--VHGDC 86
Score = 62 (26.9 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 274 VIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
++ W DG +V S DR+ +++D + + L GH
Sbjct: 275 LLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGH 313
Score = 45 (20.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 275 IAADWLSDG-EQVITASWDRVANLFDVETGTILQSLTGHDE 314
I A SD +++ T D ++D+ G +L GH +
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQD 223
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 123 (48.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 22/74 (29%), Positives = 37/74 (50%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
F GH +AV P + S + D T +LW + G C +SGH +N++ F PN +
Sbjct: 180 FLGHTGDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGE 239
Query: 217 LVLSASGDKSVHIW 230
+ + S D + ++
Sbjct: 240 AICTGSDDATCRLF 253
Score = 55 (24.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
L GH N V +DG V T SWD +++
Sbjct: 308 LSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GH V P + + SADRTVRLW G CV ++GH G ++S+ F P
Sbjct: 621 LRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 680
Query: 214 NKDLVLSASGDKSVHIW 230
N + + + D V +W
Sbjct: 681 NGRFLATGATDGRVLLW 697
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 43/160 (26%), Positives = 67/160 (41%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
+ GH VWD P S DR RLW+T + + ++GH VN R+ PN +
Sbjct: 582 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSN 641
Query: 217 LVLSASGDKSVHIWQAVINWECXXXXXXXXX---XESKEPD---------ESSITL---- 260
V + S D++V +W V+N C + P+ + + L
Sbjct: 642 YVATGSADRTVRLWD-VLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 700
Query: 261 -RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
V EL GH++ V + + DGE + + S D L+D
Sbjct: 701 HGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 124 (48.7 bits), Expect = 0.00017, P = 0.00017
Identities = 37/133 (27%), Positives = 59/133 (44%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R F+GH+ + + P L + + D V LW G V + GH+ +V S+RF
Sbjct: 663 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR 722
Query: 214 NKDLVLSASGDKSVHIWQAVINWE-CXXXXXXXXXXESKEPDESS-------ITLRTPVK 265
+ +++ S S D +V +W AV +E P+ S +T TPV
Sbjct: 723 DGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVV 782
Query: 266 EL-LGHSNVVIAA 277
L N+V+AA
Sbjct: 783 HLHFTRRNLVLAA 795
Score = 121 (47.7 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
+++ GH V+ + P + L S+S D TVRLWS QT C++ Y GH+ V +F
Sbjct: 536 ELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFS 595
Query: 213 PNKDLVLSASGDKSVHIW 230
P +S D+ +W
Sbjct: 596 PYGYYFVSGGHDRVARLW 613
Score = 50 (22.7 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
V+ GH + + + +G + T + D L+D+ G ++ L GH +
Sbjct: 663 VRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 713
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 22/79 (27%), Positives = 43/79 (54%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+ +GH+ + V P ++ SAS D++++LW +TGK + GH +V + +
Sbjct: 378 LERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSA 437
Query: 214 NKDLVLSASGDKSVHIWQA 232
+ L++S S D ++ +W A
Sbjct: 438 DSRLLVSGSSDSTLKVWDA 456
Score = 111 (44.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 25/83 (30%), Positives = 46/83 (55%)
Query: 155 RSFSGHRDGV----WD-VAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSV 209
R +GH + W+ + + P L SAS D ++R+W T G+C +GH+ SV V
Sbjct: 206 RVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCV 265
Query: 210 RFLPNKDLVLSASGDKSVHIWQA 232
++ L+ S+S D+++ +W++
Sbjct: 266 KW-GGDGLLYSSSQDRTIKVWRS 287
Score = 96 (38.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 23/75 (30%), Positives = 31/75 (41%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
S GH + V VA P L S S D TVR W T GH V S+ + P+
Sbjct: 122 SLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDG 181
Query: 216 DLVLSASGDKSVHIW 230
+ S + + +W
Sbjct: 182 KKLASGCKNSQIFLW 196
Score = 73 (30.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
L GH + V W +D +++ S D ++D ET + L GH +E
Sbjct: 423 LRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADE 471
Score = 72 (30.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 261 RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+ P++ + GH ++ + D + +AS+D+ L++ TG L SL GH
Sbjct: 375 KKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGH 426
Score = 71 (30.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 265 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSY 324
K L GH+ V W DG + ++S DR ++ + G + ++L GH + + +S+
Sbjct: 253 KILTGHTQSVTCVKWGGDG-LLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTD 311
Query: 325 Y 325
Y
Sbjct: 312 Y 312
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 140 (54.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/156 (23%), Positives = 68/156 (43%)
Query: 159 GHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLV 218
GH V DVA P V + D R+W +TG+C++ GH+ ++SV ++PN +
Sbjct: 336 GHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEM 395
Query: 219 LSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESS---------ITLRT------- 262
++ S D S+ +W + D + TL+
Sbjct: 396 ITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGWQ 455
Query: 263 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLF 298
P+++L GH ++ D DG+ + ++++DR L+
Sbjct: 456 PLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLW 491
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 47/158 (29%), Positives = 71/158 (44%)
Query: 162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-------SGHSGSVNSVRFLPN 214
DGV VAV P ++ + S DRTVR+W + TG V + +GH SV SV F N
Sbjct: 339 DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNN 398
Query: 215 KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVV 274
+ + S S D++V +W E K +S+ + +GH + V
Sbjct: 399 GEQIASGSLDRTVKLWHL----------------EGKSDKKSTCEVT-----YIGHKDFV 437
Query: 275 IAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
++ D E +++ S DR +D +G L L GH
Sbjct: 438 LSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGH 475
Score = 125 (49.1 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 29/78 (37%), Positives = 39/78 (50%)
Query: 158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLW-----STQTGKCVLQYSGHSGSVNSVRFL 212
+GH D V+ VA + S S DRTV+LW S + C + Y GH V SV
Sbjct: 384 NGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCT 443
Query: 213 PNKDLVLSASGDKSVHIW 230
P+ + +LS S D+ V W
Sbjct: 444 PDNEYILSGSKDRGVIFW 461
Score = 124 (48.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 29/104 (27%), Positives = 50/104 (48%)
Query: 128 KTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD-GVWDVAVRPGQPVLGSASADRTVR 186
KTT V T ++V+ + K + + D + V P +L + + D+ +R
Sbjct: 221 KTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIR 280
Query: 187 LWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
+W T + + GH + S+ F P+ D ++S SGD+SV IW
Sbjct: 281 IWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIW 324
Score = 116 (45.9 bits), Expect = 0.00073, P = 0.00073
Identities = 25/79 (31%), Positives = 41/79 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I+ GH ++ + P L S S DR+VR+W +T +C L S G V +V P
Sbjct: 290 IKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSP 348
Query: 214 NKDLVLSASGDKSVHIWQA 232
+ L+ + S D++V +W +
Sbjct: 349 DGKLIAAGSLDRTVRVWDS 367
Score = 56 (24.8 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 20/81 (24%), Positives = 38/81 (46%)
Query: 282 DGEQVITASWDRVANLFDVETGTILQSL-------TGHDEEPHILCVSSYYSKV---SCD 331
DG+ + S DR ++D TG +++ L GH++ + + S+ ++ S D
Sbjct: 349 DGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLD 408
Query: 332 LFQRIQHLDCGTSENPIHSVC 352
++ HL+ G S+ S C
Sbjct: 409 RTVKLWHLE-GKSDKK--STC 426
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 47/158 (29%), Positives = 71/158 (44%)
Query: 162 DGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQY-------SGHSGSVNSVRFLPN 214
DGV VAV P ++ + S DRTVR+W + TG V + +GH SV SV F N
Sbjct: 339 DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNN 398
Query: 215 KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVV 274
+ + S S D++V +W E K +S+ + +GH + V
Sbjct: 399 GEQIASGSLDRTVKLWHL----------------EGKSDKKSTCEVT-----YIGHKDFV 437
Query: 275 IAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
++ D E +++ S DR +D +G L L GH
Sbjct: 438 LSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGH 475
Score = 125 (49.1 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 29/78 (37%), Positives = 39/78 (50%)
Query: 158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLW-----STQTGKCVLQYSGHSGSVNSVRFL 212
+GH D V+ VA + S S DRTV+LW S + C + Y GH V SV
Sbjct: 384 NGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCT 443
Query: 213 PNKDLVLSASGDKSVHIW 230
P+ + +LS S D+ V W
Sbjct: 444 PDNEYILSGSKDRGVIFW 461
Score = 124 (48.7 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 29/104 (27%), Positives = 50/104 (48%)
Query: 128 KTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD-GVWDVAVRPGQPVLGSASADRTVR 186
KTT V T ++V+ + K + + D + V P +L + + D+ +R
Sbjct: 221 KTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIR 280
Query: 187 LWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
+W T + + GH + S+ F P+ D ++S SGD+SV IW
Sbjct: 281 IWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIW 324
Score = 116 (45.9 bits), Expect = 0.00073, P = 0.00073
Identities = 25/79 (31%), Positives = 41/79 (51%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I+ GH ++ + P L S S DR+VR+W +T +C L S G V +V P
Sbjct: 290 IKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSP 348
Query: 214 NKDLVLSASGDKSVHIWQA 232
+ L+ + S D++V +W +
Sbjct: 349 DGKLIAAGSLDRTVRVWDS 367
Score = 56 (24.8 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 20/81 (24%), Positives = 38/81 (46%)
Query: 282 DGEQVITASWDRVANLFDVETGTILQSL-------TGHDEEPHILCVSSYYSKV---SCD 331
DG+ + S DR ++D TG +++ L GH++ + + S+ ++ S D
Sbjct: 349 DGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLD 408
Query: 332 LFQRIQHLDCGTSENPIHSVC 352
++ HL+ G S+ S C
Sbjct: 409 RTVKLWHLE-GKSDKK--STC 426
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 27/58 (46%), Positives = 36/58 (62%)
Query: 173 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
Q L SAS D TV+LW + GK + ++GH V S+ F PN + + S S DKS+HIW
Sbjct: 511 QLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIW 568
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 128 (50.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 30/81 (37%), Positives = 45/81 (55%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKC--VLQYSGHSGSVNSVRFL 212
R+F GH + V V+ + S S DRT++LW+T G C + GH+ V+ VRF
Sbjct: 99 RTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWNT-LGDCKYTITDKGHTEWVSCVRFS 157
Query: 213 PNKD--LVLSASGDKSVHIWQ 231
PN +++SA DK V +W+
Sbjct: 158 PNPQNPVIVSAGWDKLVKVWE 178
Score = 118 (46.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 152 YKIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRF 211
Y RS GH V D + SAS D+++RLW +G+ + GH+ V SV F
Sbjct: 54 YPKRSLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSF 113
Query: 212 LPNKDLVLSASGDKSVHIWQAV 233
+ ++S S D+++ +W +
Sbjct: 114 SADNRQIVSGSRDRTIKLWNTL 135
Score = 95 (38.5 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 263 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
P + L GHS++V SDG ++ASWD+ L+++ +G ++ GH + +L VS
Sbjct: 55 PKRSLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTND--VLSVS 112
Score = 62 (26.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 201 GHSGSVNSVRF-LPNKDLVLSASGDKSVHIW 230
GH+G V S+ L N +++LS S DK++ IW
Sbjct: 13 GHNGWVTSLATSLENPNMLLSGSRDKTLIIW 43
Score = 47 (21.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 16/55 (29%), Positives = 22/55 (40%)
Query: 268 LGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
+GH+ + DG + D V L+D+ L SL DE H L S
Sbjct: 189 IGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGDEI-HALVFS 242
Score = 41 (19.5 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 5/27 (18%), Positives = 16/27 (59%)
Query: 286 VITASWDRVANLFDVETGTILQSLTGH 312
+++A WD++ ++++ + + GH
Sbjct: 165 IVSAGWDKLVKVWELASCRLQTDHIGH 191
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 147 (56.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 48/159 (30%), Positives = 75/159 (47%)
Query: 162 DGVWDVAVRPGQ-PVLGSASADRTVRLWSTQTGKCVLQY-------SGHSGSVNSVRFLP 213
DGV VAV PG + + S DR VR+W ++TG V + +GH SV SV F
Sbjct: 527 DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR 586
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNV 273
+ V+S S D+SV +W N + +SK P+ + + +GH +
Sbjct: 587 DGQSVVSGSLDRSVKLW----NLQ-----NANNKSDSKTPNSGTCEVT-----YIGHKDF 632
Query: 274 VIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
V++ + E +++ S DR +D ++G L L GH
Sbjct: 633 VLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGH 671
Score = 121 (47.7 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 28/130 (21%), Positives = 59/130 (45%)
Query: 103 ECVTNMNKNFNKQKVLASNPSAQKLKTTNKLKVQTSKIVSSFKTSLLSCYKIRSFSGHRD 162
+ N ++N + ++ + TT + T+ + S+ + + + + S
Sbjct: 384 DSAANNHRNSITENNTTTSTDNNTMTTTTTTTITTTAMTSAAELAK-DVENLNTSSSPSS 442
Query: 163 GVW--DVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLS 220
++ V P L + + DR +R+W + K V+ GH + S+ + P+ D ++S
Sbjct: 443 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVS 502
Query: 221 ASGDKSVHIW 230
SGD++V IW
Sbjct: 503 GSGDRTVRIW 512
Score = 60 (26.2 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 282 DGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
DG+ + S DR ++D ETG +++ L +E
Sbjct: 538 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENE 570
Score = 37 (18.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 48 SSVKFKLNSLFSQIEREF 65
S+ + KLN L I +EF
Sbjct: 6 SNTQNKLNELLDAIRQEF 23
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 116 (45.9 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
+F+GH V +++ P + S + D + +LW + G C ++GH +N++ F PN
Sbjct: 79 TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNG 138
Query: 216 DLVLSASGDKSVHIW 230
+ + S D + ++
Sbjct: 139 NAFATGSDDATCRLF 153
Score = 99 (39.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 178 SASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
++S D T LW +TG+ ++GH+G V S+ P+ L +S + D S +W
Sbjct: 59 TSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW 111
Score = 55 (24.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
L GH N V DG V T SWD +++
Sbjct: 208 LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
>SGD|S000001885 [details] [associations]
symbol:CDC4 "F-box protein required for G1/S and G2/M
transition" species:4932 "Saccharomyces cerevisiae" [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IGI;IMP]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043224 "nuclear SCF
ubiquitin ligase complex" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IDA] [GO:0007126 "meiosis" evidence=IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0030435 "sporulation resulting in
formation of a cellular spore" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 SGD:S000001885 GO:GO:0007126 GO:GO:0000086
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:D50617 EMBL:BK006940
SUPFAM:SSF81383 GO:GO:0030435 GO:GO:0016363 GO:GO:0042787
GO:GO:0043130 EMBL:Z46255 GeneTree:ENSGT00550000075528
GO:GO:0031146 EMBL:X05625 PIR:S56245 RefSeq:NP_116585.1 PDB:1NEX
PDB:2P63 PDB:3MKS PDB:3V7D PDBsum:1NEX PDBsum:2P63 PDBsum:3MKS
PDBsum:3V7D ProteinModelPortal:P07834 SMR:P07834 DIP:DIP-1625N
IntAct:P07834 MINT:MINT-389524 STRING:P07834 PaxDb:P07834
PRIDE:P07834 EnsemblFungi:YFL009W GeneID:850539 KEGG:sce:YFL009W
CYGD:YFL009w HOGENOM:HOG000111495 KO:K03361 OMA:VVTCLQH
OrthoDB:EOG4B2X5M EvolutionaryTrace:P07834 NextBio:966298
Genevestigator:P07834 GermOnline:YFL009W GO:GO:0043224
Uniprot:P07834
Length = 779
Score = 142 (55.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 44/165 (26%), Positives = 72/165 (43%)
Query: 158 SGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDL 217
SGH GVW + G +L S S DRTVR+W + G C + GH+ +V + + K++
Sbjct: 419 SGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFKGHNSTVRCLDIVEYKNI 477
Query: 218 --VLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTP------VKELLG 269
+++ S D ++H+W+ + E + + TP V L G
Sbjct: 478 KYIVTGSRDNTLHVWKLP---------KESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 528
Query: 270 HSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
H V G V++ S+D ++DV L L+GH +
Sbjct: 529 HMASVRTVS--GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTD 571
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 133 (51.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+RSF GH V D + SAS D+T+RLW TG+ ++ GH V SV
Sbjct: 58 VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117
Query: 214 NKDLVLSASGDKSVHIWQAVINWEC 238
+++S S DK++ +W I +C
Sbjct: 118 KASMIISGSRDKTIKVW--TIKGQC 140
Score = 109 (43.4 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 263 PVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEE 315
PV+ GHS++V +DG ++ASWD+ L+DV TG Q GH +
Sbjct: 57 PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSD 109
Score = 95 (38.5 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 27/81 (33%), Positives = 38/81 (46%)
Query: 156 SFSGHRDGVWDVAVRPGQP-VLGSASADRTVRLWST-----QTGKCVLQYSGHSGSVNSV 209
+ GH V +A GQP +L SAS D+T+ W + G V + GHS V
Sbjct: 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDC 71
Query: 210 RFLPNKDLVLSASGDKSVHIW 230
+ LSAS DK++ +W
Sbjct: 72 TLTADGAYALSASWDKTLRLW 92
Score = 58 (25.5 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 12/50 (24%), Positives = 27/50 (54%)
Query: 265 KELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
+ +GH + V++ D +I+ S D+ ++ ++ G L +L GH++
Sbjct: 101 QRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHND 149
Score = 53 (23.7 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 201 GHSGSVNSVRFLPNK-DLVLSASGDKSVHIWQ 231
GH+G V S+ + +L+LSAS DK++ W+
Sbjct: 15 GHNGWVTSLATSAGQPNLLLSASRDKTLISWK 46
Score = 41 (19.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 10/49 (20%), Positives = 23/49 (46%)
Query: 266 ELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDE 314
+ +GH++ + DG + +A D L+++ + +L+ DE
Sbjct: 191 DFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDE 239
Score = 40 (19.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 266 ELLGHSNVV----IAADWLSDGEQVITASWDRVANLFDVET 302
E G+S ++ W +DG+ + D V ++ V T
Sbjct: 277 EFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317
Score = 40 (19.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 267 LLGH----SNVVIAADWLSDGEQV--ITASWDRVANLFDVETGTILQSLTGHDEEPHILC 320
LLGH S V + + +D + V I+A D++ +++ I GH+ + L
Sbjct: 144 LLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLT 203
Query: 321 VS 322
S
Sbjct: 204 AS 205
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 27/85 (31%), Positives = 39/85 (45%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
I S HR GVW V P + SAD T+++WS C+ GH GSV F+
Sbjct: 562 ITSIKAHRRGVWHVEFSPIDQCFLTCSADGTIKIWSLSDYTCLKTLEGHKGSVLKASFIS 621
Query: 214 NKDLVLSASGDKSVHIWQAVINWEC 238
++S + + + +W N EC
Sbjct: 622 FGMQIVSVASEGLIKLWNIKTN-EC 645
Score = 120 (47.3 bits), Expect = 0.00056, P = 0.00056
Identities = 53/246 (21%), Positives = 102/246 (41%)
Query: 76 QDKIDMLMEKLDRESIINEK---YPECNDMECVTNMNKNFNKQ-KVLASNPSAQKLKTTN 131
+DK D L SIIN K ++ + K +Q +++ N +K N
Sbjct: 338 KDKTDTLYTI---SSIINNKDKIISITSEHNLLIYNGKTLERQGEIIGYNDEIIDIKYIN 394
Query: 132 KLKVQTSKIVSSFKTSLLSCYKIRSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWST 190
+ + + KT L+ + + GH D V V V G+ ++ S S D++ +W
Sbjct: 395 DDNIIVATNSNEIKTYDLNTKRAQVLRGHEDLVMSVDVSADGKHII-SGSRDKSAMIWDL 453
Query: 191 QTGKCVLQYSGHSGSVNSVRFLPNKD----LVLSASGDKSVHIWQAVINWECXXXXXXXX 246
+ + + Q +GH+G ++ V LP K ++AS D+++ +W+
Sbjct: 454 EKKESIAQLTGHTGVISCVA-LPKKPSTSMFAITASDDRTIKLWKGF------STTSSSG 506
Query: 247 XXESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTIL 306
+SK+ D+ + V ++ H + + + + TAS D L++V +
Sbjct: 507 GDDSKKKDKK---ISASVTKI-AHEKDINSISIAPNDKIFATASQDSYVKLWNVNNLEPI 562
Query: 307 QSLTGH 312
S+ H
Sbjct: 563 TSIKAH 568
Score = 100 (40.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 30/130 (23%), Positives = 56/130 (43%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
++ + GH + ++ + ++ SAS+D+TV++W + G C + H V ++F P
Sbjct: 122 VKIWKGHEGPINEIDIHSSGNIVASASSDKTVKVWDLEKGYCTHNFQ-HDDVVTMLKFHP 180
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKEPDESSITLRTPVKELL--GHS 271
+++ D ++ ++ V EC S IT KEL+ G
Sbjct: 181 TLLKLVTVCLDLNIRVYDLVTK-ECVILTNHLSQI-------SGITFSNSGKELISSGRD 232
Query: 272 NVVIAADWLS 281
V+ D LS
Sbjct: 233 KVLNVWDMLS 242
Score = 94 (38.1 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 19/79 (24%), Positives = 36/79 (45%)
Query: 160 HRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL 219
H + +++ P + +AS D V+LW+ + + H V V F P L
Sbjct: 526 HEKDINSISIAPNDKIFATASQDSYVKLWNVNNLEPITSIKAHRRGVWHVEFSPIDQCFL 585
Query: 220 SASGDKSVHIWQAVINWEC 238
+ S D ++ IW ++ ++ C
Sbjct: 586 TCSADGTIKIW-SLSDYTC 603
Score = 90 (36.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVSSYYS 326
L GH ++V++ D +DG+ +I+ S D+ A ++D+E + LTGH I CV+
Sbjct: 420 LRGHEDLVMSVDVSADGKHIISGSRDKSAMIWDLEKKESIAQLTGHTGV--ISCVA-LPK 476
Query: 327 KVSCDLF 333
K S +F
Sbjct: 477 KPSTSMF 483
Score = 84 (34.6 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 18/66 (27%), Positives = 38/66 (57%)
Query: 257 SITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEP 316
S++ T +K L GH V+ A ++S G Q+++ + + + L++++T L + GH+ +
Sbjct: 597 SLSDYTCLKTLEGHKGSVLKASFISFGMQIVSVASEGLIKLWNIKTNECLNTFEGHESKI 656
Query: 317 HILCVS 322
L V+
Sbjct: 657 WALSVA 662
Score = 75 (31.5 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 15/63 (23%), Positives = 31/63 (49%)
Query: 168 AVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSV 227
A+ P + ++ ++ + + V + GH G +N + + ++V SAS DK+V
Sbjct: 94 ALSPNNEEILIGCSNLQIKQYRIEDQSLVKIWKGHEGPINEIDIHSSGNIVASASSDKTV 153
Query: 228 HIW 230
+W
Sbjct: 154 KVW 156
>UNIPROTKB|B3MJV8 [details] [associations]
symbol:GF14067 "Ribosome biogenesis protein WDR12 homolog"
species:7217 "Drosophila ananassae" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH902620 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001963192.1 ProteinModelPortal:B3MJV8 STRING:B3MJV8
EnsemblMetazoa:FBtr0118767 GeneID:6496895 KEGG:dan:Dana_GF14067
FlyBase:FBgn0091094 InParanoid:B3MJV8 Uniprot:B3MJV8
Length = 419
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 37/127 (29%), Positives = 56/127 (44%)
Query: 178 SASADRTVRLWS----TQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAV 233
S+S D+T LW + T +CV GH V+SV P+ + S D + +W A
Sbjct: 164 SSSQDQTAMLWQWNVGSNTAECVSVCKGHERGVDSVSVSPDGQRFATGSWDTMLKVWSAE 223
Query: 234 INWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDR 293
++ SK ES + RTP L GH + A W+ D ++T SWD
Sbjct: 224 LD--------DAGEGTSKRMKESGV--RTPKMTLQGHRESISAVQWM-DASTLLTGSWDH 272
Query: 294 VANLFDV 300
++D+
Sbjct: 273 TLKVWDL 279
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 40/139 (28%), Positives = 66/139 (47%)
Query: 175 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI 234
+L +AS+D ++LW +C GH+ SVN RF P+ L+ S S D ++ +W
Sbjct: 716 LLATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKS 775
Query: 235 NWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV 294
E S+EP E E+ +V W +DG +++ A+ +++
Sbjct: 776 ANERKSINVKQFFLNSEEPQEDM--------EV-----IVKCCSWSADGTRIMVAAKNKI 822
Query: 295 ANLFDVETGTILQSL-TGH 312
LFD+ TG +L + TGH
Sbjct: 823 F-LFDIHTGGLLAEIHTGH 840
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 40/139 (28%), Positives = 66/139 (47%)
Query: 175 VLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQAVI 234
+L +AS+D ++LW +C GH+ SVN RF P+ L+ S S D ++ +W
Sbjct: 723 LLATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKS 782
Query: 235 NWECXXXXXXXXXXESKEPDESSITLRTPVKELLGHSNVVIAADWLSDGEQVITASWDRV 294
E S+EP E E+ +V W +DG +++ A+ +++
Sbjct: 783 ANERKSINVKQFFLNSEEPQEDM--------EV-----IVKCCSWSADGTRIMVAAKNKI 829
Query: 295 ANLFDVETGTILQSL-TGH 312
LFD+ TG +L + TGH
Sbjct: 830 F-LFDIHTGGLLAEIHTGH 847
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 46/174 (26%), Positives = 70/174 (40%)
Query: 155 RSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPN 214
R F GHRD V V L S S D + +W + +++GH +V V F P+
Sbjct: 44 RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 103
Query: 215 KDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESKE-----------PDESSITLRTP 263
L+ S S DK+V IW I E S D+ +I + +
Sbjct: 104 GHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWST 163
Query: 264 VKE-----LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
++ L H N V A + DG +++AS D+ L+D + + S H
Sbjct: 164 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEH 217
Score = 122 (48.0 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 44/159 (27%), Positives = 69/159 (43%)
Query: 172 GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIWQ 231
GQ + +AS D+T+++WST K + S H V +F P+ L++SAS DK+V +W
Sbjct: 146 GQSFV-TASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 204
Query: 232 AV----INWECXXXXXXXXXXESKEPDESSIT---LRTPVK-------ELLGH----SNV 273
++ C P + + + VK LL H S
Sbjct: 205 KTSRECVHSYCEHGGFVTYV--DFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAA 262
Query: 274 VIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
V A + G ++TAS D + D+ G +L +L GH
Sbjct: 263 VNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGH 301
Score = 115 (45.5 bits), Expect = 0.00056, P = 0.00056
Identities = 27/75 (36%), Positives = 38/75 (50%)
Query: 156 SFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNK 215
S S H + V P ++ SAS D+TV+LW + +CV Y H G V V F P+
Sbjct: 171 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 230
Query: 216 DLVLSASGDKSVHIW 230
V +A D +V +W
Sbjct: 231 TCVAAAGMDNTVKVW 245
>UNIPROTKB|Q9W5Z5 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing protein 1"
species:31033 "Takifugu rubripes" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001496 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082 PROSITE:PS50225
PROSITE:PS50294 SMART:SM00253 SMART:SM00320 SMART:SM00969
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
CTD:26118 OrthoDB:EOG40ZQXJ EMBL:AF157597 EMBL:AF064564
RefSeq:NP_001027919.1 UniGene:Tru.1848 ProteinModelPortal:Q9W5Z5
STRING:Q9W5Z5 GeneID:445931 KEGG:tru:445931 InParanoid:Q9W5Z5
Uniprot:Q9W5Z5
Length = 427
Score = 98 (39.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 160 HRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDL 217
H D V D+ P G +L SAS D+ +R+W + G V GH V S F P+ +
Sbjct: 174 HTDIVRDLTFAPDGSLMLVSASTDKKLRVWDLKDDGNMVKVLWGHPNRVYSSAFSPDSSV 233
Query: 218 VLSASGDKSVHIW 230
+ S K+V +W
Sbjct: 234 LCSVGASKAVLLW 246
Score = 87 (35.7 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 173 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW 230
Q +L + + +++W TG +L H+ V + F P+ L+L SAS DK + +W
Sbjct: 145 QLLLATGLNNGRIKIWDVYTGTLLLNLMDHTDIVRDLTFAPDGSLMLVSASTDKKLRVW 203
Score = 84 (34.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 262 TPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
T +++L GH N V++ ++ DG + TAS+D ++D + G+IL L GH
Sbjct: 252 TLIRKLEGHHNDVVSCEFSPDGALLATASYDTRVIVWDHQRGSILLEL-GH 301
>TAIR|locus:2016214 [details] [associations]
symbol:AT1G79990 species:3702 "Arabidopsis thaliana"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0005829 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR019185
Pfam:PF09801 IPI:IPI00537842 RefSeq:NP_178116.5 UniGene:At.22078
ProteinModelPortal:F4HQE6 SMR:F4HQE6 PRIDE:F4HQE6
EnsemblPlants:AT1G79990.1 GeneID:844339 KEGG:ath:AT1G79990
OMA:EHAVRES Uniprot:F4HQE6
Length = 1135
Score = 124 (48.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 30/80 (37%), Positives = 43/80 (53%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTG-KCVLQYSGHSGSVNSVRF 211
KI+ F H D + VAV P P + S+S D ++LW + G C + GHS V V F
Sbjct: 306 KIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTF 365
Query: 212 LP-NKDLVLSASGDKSVHIW 230
P + + SAS D+++ IW
Sbjct: 366 NPKDTNTFASASLDRTIKIW 385
Score = 66 (28.3 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 270 HSNVVIAADWLSDGEQ--VITASWDRVANLFDVETGTILQSLTGH 312
H V D+ + G++ +IT S D A ++D +T + +Q+L GH
Sbjct: 399 HLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGH 443
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 153 KIRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFL 212
++R++ GHR GV+ VA+ P VL S D VR+W +T + + GH G++ S++
Sbjct: 283 QVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIFEMKGHKGTILSLKSQ 342
Query: 213 PNKDLVLSASGDKSVHIW 230
V+S S D +V +W
Sbjct: 343 NADPQVISGSMDTTVKLW 360
Score = 115 (45.5 bits), Expect = 0.00096, P = 0.00096
Identities = 38/175 (21%), Positives = 67/175 (38%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
+R SGH V +AV + S D T+++W +G+ + +GH ++ +
Sbjct: 200 MRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSS 259
Query: 214 NKDLVLSASGDKSVHIWQAVINWECXXXXXXXXXXESK--EPD---------ESSITL-- 260
+ S D V W N + S P ++ + +
Sbjct: 260 RHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWD 319
Query: 261 ---RTPVKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
R + E+ GH +++ + QVI+ S D L+D+ TGT +LT H
Sbjct: 320 MRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNH 374
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 117 (46.2 bits), Expect = 0.00027, P = 0.00027
Identities = 35/107 (32%), Positives = 51/107 (47%)
Query: 129 TTNKLKVQTSK--IVSSFKTSLLSC-YKIRSFSGHRDGVWDVAVRPGQ--PVLGSASADR 183
T N+ V S+ + + T L C Y I GH++ V V P P + SAS D+
Sbjct: 115 TDNRQIVSASRDRTIKLWNT-LGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Query: 184 TVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVLSASGDKSVHIW 230
TV++W+ Q K GHSG +N+V P+ L S D + +W
Sbjct: 174 TVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLW 220
Score = 116 (45.9 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 30/85 (35%), Positives = 45/85 (52%)
Query: 155 RSFSGHRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
R +GH V DV + GQ L S S D +RLW TG+ ++ GH+ V SV F
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFAL-SGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFST 115
Query: 214 NKDLVLSASGDKSVHIWQAVINWEC 238
+ ++SAS D+++ +W + EC
Sbjct: 116 DNRQIVSASRDRTIKLWNTL--GEC 138
Score = 60 (26.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 10/37 (27%), Positives = 22/37 (59%)
Query: 286 VITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
+++ASWD+ +++++ + SL GH + + VS
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVS 202
Score = 50 (22.7 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 18/56 (32%), Positives = 23/56 (41%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGHDEEPHILCVS 322
L+GHS + DG + D V L+D+ G L SL H LC S
Sbjct: 189 LVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-GSIIHSLCFS 243
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 121 (47.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
F GH +AV P + S + D + +LW + G C ++GH +N++ F PN +
Sbjct: 180 FVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGE 239
Query: 217 LVLSASGDKSVHIW 230
+ + S D S ++
Sbjct: 240 AICTGSDDASCRLF 253
Score = 55 (24.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
L GH N V +DG V T SWD +++
Sbjct: 308 LSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 121 (47.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 157 FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKD 216
F GH +AV P + S + D + +LW + G C ++GH +N++ F PN +
Sbjct: 180 FVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGE 239
Query: 217 LVLSASGDKSVHIW 230
+ + S D S ++
Sbjct: 240 AICTGSDDASCRLF 253
Score = 55 (24.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 267 LLGHSNVVIAADWLSDGEQVITASWDRVANLFD 299
L GH N V +DG V T SWD +++
Sbjct: 308 LSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 154 IRSFSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLP 213
IR + GH GV V++ P ++ +A D ++LW +T V+ GH G +N V+ P
Sbjct: 217 IRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTP 276
Query: 214 NKDLVLSASGDKSVHIWQAV 233
V+S+S D +V +W V
Sbjct: 277 VDPQVVSSSTDATVRLWDVV 296
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 149 LSCYKIRS-FSGHRDGVWDVAVRPGQPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVN 207
L+ K+++ +GH V DVAV P L S S D+TV+ W + + + Y GH V
Sbjct: 169 LATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVR 228
Query: 208 SVRFLPNKDLVLSASGDKSVHIW 230
+V P DL+ +A D + +W
Sbjct: 229 TVSIHPTLDLIATAGRDSVIKLW 251
>UNIPROTKB|E1BY92 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 EMBL:AADN02025704 IPI:IPI00685000
Ensembl:ENSGALT00000034682 ArrayExpress:E1BY92 Uniprot:E1BY92
Length = 420
Score = 100 (40.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 160 HRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDL 217
H + V D+ P G +L SAS D+T+R+W + G + GH V F P+ +
Sbjct: 169 HTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYGCAFSPDSSI 228
Query: 218 VLSASGDKSVHIW 230
+ S K+V +W
Sbjct: 229 LCSVGASKAVFLW 241
Score = 95 (38.5 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 173 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW 230
Q +L + + +++W TGK +L H+ V + F P+ L+L SAS DK++ +W
Sbjct: 140 QLLLATGLNNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVW 198
Score = 81 (33.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+++L GH N V+A ++ DG + TAS+D ++D G IL+ GH
Sbjct: 249 IRKLEGHHNDVVACEFSPDGALLATASYDTRVYVWDPYIGVILREF-GH 296
>UNIPROTKB|Q9W7K9 [details] [associations]
symbol:SWiP-1 "SOCS box-containing WD protein SWiP-1"
species:9031 "Gallus gallus" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
EMBL:AADN02025704 EMBL:AF072879 IPI:IPI00570763 RefSeq:NP_990203.1
UniGene:Gga.3758 STRING:Q9W7K9 Ensembl:ENSGALT00000009090
GeneID:395685 KEGG:gga:395685 InParanoid:Q9W7K9 NextBio:20815757
Uniprot:Q9W7K9
Length = 421
Score = 100 (40.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 160 HRDGVWDVAVRP-GQPVLGSASADRTVRLWSTQT-GKCVLQYSGHSGSVNSVRFLPNKDL 217
H + V D+ P G +L SAS D+T+R+W + G + GH V F P+ +
Sbjct: 169 HTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYGCAFSPDSSI 228
Query: 218 VLSASGDKSVHIW 230
+ S K+V +W
Sbjct: 229 LCSVGASKAVFLW 241
Score = 95 (38.5 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 173 QPVLGSASADRTVRLWSTQTGKCVLQYSGHSGSVNSVRFLPNKDLVL-SASGDKSVHIW 230
Q +L + + +++W TGK +L H+ V + F P+ L+L SAS DK++ +W
Sbjct: 140 QLLLATGLNNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVW 198
Score = 81 (33.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 264 VKELLGHSNVVIAADWLSDGEQVITASWDRVANLFDVETGTILQSLTGH 312
+++L GH N V+A ++ DG + TAS+D ++D G IL+ GH
Sbjct: 249 IRKLEGHHNDVVACEFSPDGALLATASYDTRVYVWDPYIGVILREF-GH 296
WARNING: HSPs involving 460 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.128 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 361 341 0.00095 116 3 11 23 0.43 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 710
No. of states in DFA: 615 (65 KB)
Total size of DFA: 248 KB (2133 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.89u 0.11s 30.00t Elapsed: 00:00:01
Total cpu time: 29.93u 0.11s 30.04t Elapsed: 00:00:01
Start: Thu Aug 15 13:15:59 2013 End: Thu Aug 15 13:16:00 2013
WARNINGS ISSUED: 2