RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy8432
(788 letters)
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like
repeat, protein transport; 2.90A {Saccharomyces
cerevisiae} SCOP: a.118.8.1
Length = 292
Score = 37.7 bits (87), Expect = 0.011
Identities = 26/173 (15%), Positives = 58/173 (33%), Gaps = 9/173 (5%)
Query: 87 FIFGPTEGVPTHNYKELAHNYKKSAHNYKELAHNYK-----KSAHNYKELAHNYKKSAHN 141
G ++ ++E A ++A Y+ A +Y++ A N ++ +
Sbjct: 20 GFMKLFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNT 79
Query: 142 YKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 201
Y E +K A + ++A +++ A+ EL + H+Y +
Sbjct: 80 YVEAYKCFKSG--GNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKA 137
Query: 202 AHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNY 254
Y+ + Y + ++ + K Y E + Y K +
Sbjct: 138 IDCYELAGEWYAQ--DQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSS 188
Score = 36.1 bits (83), Expect = 0.034
Identities = 25/162 (15%), Positives = 56/162 (34%), Gaps = 9/162 (5%)
Query: 294 HNYKELAHNYKKSAHNYKELAHNYK-----KSAHNYKELAHNYKKSAHNYKELAHNYKKS 348
+ ++E A ++A Y+ A +Y++ A N ++ + Y E +K
Sbjct: 31 YKFEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSG 90
Query: 349 AHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNY 408
A + ++A +++ A+ EL + H+Y + Y+ + Y
Sbjct: 91 --GNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWY 148
Query: 409 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNY 450
+ ++ + K Y E + Y K +
Sbjct: 149 AQ--DQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSS 188
Score = 36.1 bits (83), Expect = 0.034
Identities = 25/162 (15%), Positives = 56/162 (34%), Gaps = 9/162 (5%)
Query: 490 HNYKELAHNYKKSAHNYKELAHNYK-----KSAHNYKELAHNYKKSAHNYKELAHNYKKS 544
+ ++E A ++A Y+ A +Y++ A N ++ + Y E +K
Sbjct: 31 YKFEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSG 90
Query: 545 AHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNY 604
A + ++A +++ A+ EL + H+Y + Y+ + Y
Sbjct: 91 --GNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWY 148
Query: 605 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNY 646
+ ++ + K Y E + Y K +
Sbjct: 149 AQ--DQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSS 188
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein
structure initiative, PSI, center for eukaryotic
structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Length = 307
Score = 34.5 bits (79), Expect = 0.12
Identities = 29/201 (14%), Positives = 61/201 (30%), Gaps = 10/201 (4%)
Query: 106 NYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK 165
+Y +A Y + A +K +A ++ Y + A + + +A +++ K
Sbjct: 31 DYDSAASEYAKAAVAFK-NAKQLEQAKDAYLQEAEAHANN-RSLFHAAKAFEQAGMMLKD 88
Query: 166 SAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHN 225
A Y + A +A + + + H Y+++A
Sbjct: 89 --LQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEPL--DLSKAVHLYQQAAAV 144
Query: 226 YKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 285
++ + A A + E A + +K YKE+ NY
Sbjct: 145 FENE--ERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM-ENYPTCYKKCIAQ 201
Query: 286 AHNYKKSAHNYKELAHNYKKS 306
+Y ++S
Sbjct: 202 VLVQ-LHRADYVAAQKCVRES 221
Score = 34.5 bits (79), Expect = 0.12
Identities = 29/201 (14%), Positives = 61/201 (30%), Gaps = 10/201 (4%)
Query: 274 NYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK 333
+Y +A Y + A +K +A ++ Y + A + + +A +++ K
Sbjct: 31 DYDSAASEYAKAAVAFK-NAKQLEQAKDAYLQEAEAHANN-RSLFHAAKAFEQAGMMLKD 88
Query: 334 SAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHN 393
A Y + A +A + + + H Y+++A
Sbjct: 89 --LQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEPL--DLSKAVHLYQQAAAV 144
Query: 394 YKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 453
++ + A A + E A + +K YKE+ NY
Sbjct: 145 FENE--ERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM-ENYPTCYKKCIAQ 201
Query: 454 AHNYKKSAHNYKELAHNYKKS 474
+Y ++S
Sbjct: 202 VLVQ-LHRADYVAAQKCVRES 221
Score = 34.5 bits (79), Expect = 0.12
Identities = 29/201 (14%), Positives = 61/201 (30%), Gaps = 10/201 (4%)
Query: 442 NYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK 501
+Y +A Y + A +K +A ++ Y + A + + +A +++ K
Sbjct: 31 DYDSAASEYAKAAVAFK-NAKQLEQAKDAYLQEAEAHANN-RSLFHAAKAFEQAGMMLKD 88
Query: 502 SAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHN 561
A Y + A +A + + + H Y+++A
Sbjct: 89 --LQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEPL--DLSKAVHLYQQAAAV 144
Query: 562 YKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 621
++ + A A + E A + +K YKE+ NY
Sbjct: 145 FENE--ERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM-ENYPTCYKKCIAQ 201
Query: 622 AHNYKKSAHNYKELAHNYKKS 642
+Y ++S
Sbjct: 202 VLVQ-LHRADYVAAQKCVRES 221
Score = 34.1 bits (78), Expect = 0.15
Identities = 25/166 (15%), Positives = 54/166 (32%), Gaps = 8/166 (4%)
Query: 610 NYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK 669
+Y +A Y + A +K +A ++ Y + A + + +A +++ K
Sbjct: 31 DYDSAASEYAKAAVAFK-NAKQLEQAKDAYLQEAEAHANN-RSLFHAAKAFEQAGMMLKD 88
Query: 670 SAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHN 729
A Y + A +A + + + H Y+++A
Sbjct: 89 --LQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEPL--DLSKAVHLYQQAAAV 144
Query: 730 YKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 775
++ + A A + E A + +K YKE+
Sbjct: 145 FENE--ERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC
domain, vesicle trafficking, membrane curvature,
endocytosis, exocytosis, F-BAR domain; 2.30A {Homo
sapiens}
Length = 276
Score = 30.0 bits (67), Expect = 2.3
Identities = 30/185 (16%), Positives = 62/185 (33%), Gaps = 2/185 (1%)
Query: 94 GVPTHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSA 153
G + L HN K + KELA ++ A + + + K A + A
Sbjct: 14 GEKNSGFDVLYHNMKHGQISTKELADFVRERATIEEAYSRSMTKLAKSASN-YSQLGTFA 72
Query: 154 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYK 213
+ + +K A+ + +L ++ ++ KS KE ++ +
Sbjct: 73 PVWDVFKTSTEKLANCHLDLVRKLQELIKEVQKYGEEQVKSHKKTKEEVAGTLEAVQTIQ 132
Query: 214 ELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAH 273
+ +KS NY ++ +K+A K+ YK Y
Sbjct: 133 SITQALQKSKENYNAKCVEQER-LKKEGATQREIEKAAVKSKKATDTYKLYVEKYALAKA 191
Query: 274 NYKKS 278
++++
Sbjct: 192 DFEQK 196
>2jfn_A Glutamate racemase; cell WALL, isomerase, cell shape, UDP-
murnac-Ala, peptidoglycan biosynthesis, peptidoglycan
synthesis; HET: GLU UMA; 1.9A {Escherichia coli}
Length = 285
Score = 29.9 bits (68), Expect = 2.7
Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 3/23 (13%)
Query: 36 IADLTLKYG-DLITEVVACNTAT 57
+ + +Y L VVACNTA+
Sbjct: 76 VTAVQERYPLALA--VVACNTAS 96
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 30.4 bits (68), Expect = 3.5
Identities = 8/22 (36%), Positives = 11/22 (50%), Gaps = 3/22 (13%)
Query: 79 PFHQRERRFI--FGPTEGVPTH 98
PF +R+ +F F P P H
Sbjct: 408 PFSERKLKFSNRFLPV-ASPFH 428
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK
guanine nucleotide exchange factors; 2.70A {Homo
sapiens} PDB: 3b13_A
Length = 436
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 98 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 156
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 157 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 216
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 217 H 217
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 126 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 184
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 185 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 244
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 245 H 245
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 140 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 198
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 199 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 258
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 259 H 259
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 154 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 212
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 213 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 272
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 273 H 273
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 168 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 226
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 227 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 286
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 287 H 287
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 182 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 240
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 241 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 300
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 301 H 301
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 196 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 254
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 255 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 314
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 315 H 315
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 210 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 268
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 269 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 328
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 329 H 329
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 224 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 282
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 283 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 342
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 343 H 343
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 238 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 296
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 297 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 356
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 357 H 357
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 252 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 310
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 311 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 370
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 371 H 371
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 266 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 324
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 325 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 384
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 385 H 385
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 280 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 338
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 339 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 398
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 399 H 399
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 294 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 352
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 353 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 412
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 413 H 413
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 308 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 366
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 367 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 426
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 427 H 427
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 322 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 380
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 381 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 440
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 441 H 441
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 336 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 394
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 395 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 454
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 455 H 455
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 350 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 408
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 409 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 468
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 469 H 469
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 364 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 422
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 423 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 482
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 483 H 483
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 378 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 436
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 437 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 496
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 497 H 497
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 392 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 450
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 451 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 510
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 511 H 511
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 406 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 464
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 465 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 524
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 525 H 525
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 420 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 478
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 479 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 538
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 539 H 539
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 434 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 492
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 493 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 552
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 553 H 553
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 448 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 506
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 507 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 566
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 567 H 567
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 462 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 520
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 521 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 580
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 581 H 581
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 476 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 534
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 535 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 594
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 595 H 595
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 490 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 548
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 549 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 608
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 609 H 609
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 504 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 562
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 563 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 622
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 623 H 623
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 518 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 576
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 577 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 636
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 637 H 637
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 532 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 590
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 591 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 650
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 651 H 651
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 546 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 604
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 605 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 664
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 665 H 665
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 560 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 618
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 619 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 678
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 679 H 679
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 574 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 632
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 633 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 692
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 693 H 693
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 588 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 646
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 647 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 706
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 707 H 707
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 602 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 660
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 661 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 720
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 721 H 721
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 616 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 674
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 675 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 734
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 735 H 735
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 630 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 688
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 689 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 748
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 749 H 749
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 644 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 702
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 703 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 762
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 763 H 763
Sbjct: 148 K 148
Score = 29.6 bits (66), Expect = 4.8
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 658 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 716
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 717 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELA 776
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+ +
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147
Query: 777 H 777
Sbjct: 148 K 148
Score = 28.4 bits (63), Expect = 9.4
Identities = 20/118 (16%), Positives = 44/118 (37%), Gaps = 1/118 (0%)
Query: 672 HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK-SAHNY 730
+N +E+ Y + NY ++A+ K S + +
Sbjct: 28 NNREEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTH 87
Query: 731 KELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE 788
++L ++ Y + ++++ KELA Y+ +Y+ L+ N + A Y+
Sbjct: 88 RQLKETLYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYES 145
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 29.4 bits (65), Expect = 6.2
Identities = 33/207 (15%), Positives = 62/207 (29%), Gaps = 42/207 (20%)
Query: 28 DVKLHDLPIADLTLKYGDLITEVVA------CNTATVIRVNKS------DIYLHYQYECR 75
+ P L+L + D+I V + V + K IYL + +
Sbjct: 384 SAHI---PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLE 440
Query: 76 RFSPFHQR--ERRFI---FGPTEGVPTHN----YKELAHNYKKS--AHNYKELAHNY--- 121
H+ + I F + +P + Y + H+ K +
Sbjct: 441 NEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDF 500
Query: 122 ----KKSAHNYKELAHNYKKSAHNYKELAHNYKK----SAHNYKELAHNYKKSAHNYKEL 173
+K H+ A N S N + YK + Y+ L + +E
Sbjct: 501 RFLEQKIRHD--STAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEEN 558
Query: 174 AHNYKKSAHNYKELAHNYKKSAHNYKE 200
K + + +A + A ++E
Sbjct: 559 LICSKYT--DLLRIALMAEDEAI-FEE 582
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1
gas} PDB: 2ohg_A 2ohv_A*
Length = 273
Score = 28.7 bits (65), Expect = 6.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 50 VVACNTAT 57
V ACNTAT
Sbjct: 79 VFACNTAT 86
>3ist_A Glutamate racemase; structural genomics, cell WALL
biogenesis/degradation, isomerase, peptidoglycan
synthesis; HET: MSE; 1.65A {Listeria monocytogenes}
PDB: 3hfr_A* 3isv_A*
Length = 269
Score = 28.6 bits (65), Expect = 7.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 50 VVACNTAT 57
V+ACNTAT
Sbjct: 72 VIACNTAT 79
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi
isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Length = 272
Score = 28.7 bits (65), Expect = 7.4
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 50 VVACNTAT 57
V+ACNTAT
Sbjct: 71 VIACNTAT 78
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus
anthracis}
Length = 276
Score = 28.7 bits (65), Expect = 7.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 50 VVACNTAT 57
VVACNTA
Sbjct: 74 VVACNTAA 81
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL
biogenesis/degradation, cell shape, benzyl purine, MURI
inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis}
PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Length = 290
Score = 28.3 bits (64), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 50 VVACNTAT 57
V+ACNTAT
Sbjct: 91 VIACNTAT 98
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus
anthracis}
Length = 267
Score = 28.3 bits (64), Expect = 8.8
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 50 VVACNTAT 57
V+ACNTAT
Sbjct: 70 VIACNTAT 77
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A
{Thermococcus SP}
Length = 526
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 101 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 159
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 160 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 214
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 115 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 173
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 174 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 228
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 129 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 187
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 188 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 242
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 143 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 201
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 202 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 256
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 157 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 215
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 216 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 270
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 171 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 229
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 230 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 284
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 185 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 243
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 244 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 298
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 199 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 257
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 258 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 312
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 213 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 271
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 272 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 326
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 227 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 285
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 286 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 340
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 241 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 299
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 300 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 354
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 255 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 313
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 314 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 368
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 269 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 327
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 328 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 382
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 283 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 341
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 342 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 396
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 297 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 355
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 356 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 410
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 311 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 369
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 370 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 424
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 325 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 383
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 384 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 438
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 339 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 397
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 398 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 452
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 353 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 411
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 412 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 466
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 367 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 425
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 426 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 480
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 381 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 439
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 440 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 494
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 395 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 453
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 454 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 508
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 409 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 467
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 468 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 522
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 423 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 481
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 482 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 536
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 437 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 495
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 496 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 550
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 451 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 509
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 510 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 564
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 465 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 523
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 524 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 578
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 479 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 537
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 538 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 592
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 493 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 551
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 552 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 606
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 507 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 565
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 566 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 620
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 521 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 579
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 580 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 634
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 535 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 593
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 594 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 648
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 549 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 607
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 608 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 662
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 563 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 621
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 622 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 676
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 577 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 635
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 636 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 690
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 591 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 649
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 650 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 704
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 605 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 663
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 664 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 718
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 619 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 677
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 678 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 732
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 633 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 691
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 692 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 746
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 647 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 705
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 706 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 760
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 661 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 719
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 720 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 774
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
Score = 28.7 bits (63), Expect = 9.3
Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 9/117 (7%)
Query: 675 KELAHNYKKSAHNYKELAHNYKKSA-HNYKELAHNYKKSAHNYKELAHNYKKSAHNYKEL 733
S + A A E A Y + A YK + ++ ++
Sbjct: 412 NATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGA------IDEYKAAINDLQKA 465
Query: 734 AHNYK-KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKE-LAHNYKKSAHNYKE 788
A + NY A ++ + Y A + A K+ ++ KE
Sbjct: 466 AQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKE 522
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP:
c.78.2.1 c.78.2.1 PDB: 1b74_A*
Length = 254
Score = 28.2 bits (64), Expect = 9.4
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 50 VVACNTAT 57
VVACNTA+
Sbjct: 67 VVACNTAS 74
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape,
peptidoglycan synthesis, peptidoglycan biosynthesis;
HET: DGL; 2.15A {Staphylococcus aureus}
Length = 286
Score = 28.3 bits (64), Expect = 9.4
Identities = 7/8 (87%), Positives = 8/8 (100%)
Query: 50 VVACNTAT 57
V+ACNTAT
Sbjct: 89 VIACNTAT 96
>3out_A Glutamate racemase; structural genomics, center for structural
genomics of infec diseases, csgid, MURI, cell envelope;
HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Length = 268
Score = 28.3 bits (64), Expect = 9.7
Identities = 4/8 (50%), Positives = 7/8 (87%)
Query: 50 VVACNTAT 57
++ACNT +
Sbjct: 74 IIACNTIS 81
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.309 0.121 0.356
Gapped
Lambda K H
0.267 0.0585 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 12,141,408
Number of extensions: 766517
Number of successful extensions: 4123
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2841
Number of HSP's successfully gapped: 455
Length of query: 788
Length of database: 6,701,793
Length adjustment: 101
Effective length of query: 687
Effective length of database: 3,881,772
Effective search space: 2666777364
Effective search space used: 2666777364
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (27.6 bits)