RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy8432
         (788 letters)



>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp.,
           strain YM-1 [TaxId: 1409]}
          Length = 277

 Score = 27.6 bits (60), Expect = 4.9
 Identities = 21/177 (11%), Positives = 42/177 (23%), Gaps = 8/177 (4%)

Query: 34  LPIADLTLKYGDLITEVVACNTATVIRVNKSDIYLHYQ---YECRRFSPFHQRERRFIFG 90
           +   D   ++GD + EVV      +  VN+     H         +        +     
Sbjct: 17  IDKEDRGYQFGDGVYEVVKVYNGEMFTVNE-----HIDRLYASAEKIRITIPYTKDKFHQ 71

Query: 91  PTEGVPTHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYK 150
               +   N     H Y +        AH + ++      + +  +              
Sbjct: 72  LLHELVEKNELNTGHIYFQVTRGTSPRAHQFPENTVKPVIIGYTKENPRPLENLEKGVKA 131

Query: 151 KSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKKSAHNYKELAHNYKK 207
               + + L  + K        LA         Y+ + H                K 
Sbjct: 132 TFVEDIRWLRCDIKSLNLLGAVLAKQEAHEKGCYEAILHRNNTVTEGSSSNVFGIKD 188


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.309    0.121    0.356 

Gapped
Lambda     K      H
   0.267   0.0576    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,032,495
Number of extensions: 159882
Number of successful extensions: 1809
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1454
Number of HSP's successfully gapped: 307
Length of query: 788
Length of database: 2,407,596
Length adjustment: 93
Effective length of query: 695
Effective length of database: 1,130,706
Effective search space: 785840670
Effective search space used: 785840670
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.1 bits)